locus-tag	class	description
BGK55_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BGK55_RS00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BGK55_RS00020	COG0187	DNA topoisomerase II activity
BGK55_RS00030	COG0501	Belongs to the peptidase M48B family
BGK55_RS00060	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
BGK55_RS00070	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BGK55_RS00115	COG0793	Belongs to the peptidase S41A family
BGK55_RS00120	COG4942	peptidase
BGK55_RS00130	COG2234	aminopeptidase activity
BGK55_RS00140	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
BGK55_RS00150	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
BGK55_RS00155	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
BGK55_RS00160	COG1064	alcohol dehydrogenase
BGK55_RS00165	COG0493	'glutamate synthase
BGK55_RS00170	COG0067	glutamate synthase
BGK55_RS00170	COG0069	glutamate synthase activity
BGK55_RS00170	COG0070	glutamate synthase
BGK55_RS00200	COG0583	DNA-binding transcription factor activity
BGK55_RS00215	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BGK55_RS00230	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
BGK55_RS00235	COG0438	transferase activity, transferring glycosyl groups
BGK55_RS00235	COG0297	glycogen (starch) synthase activity
BGK55_RS00255	COG0367	asparagine synthase
BGK55_RS00285	COG1132	(ABC) transporter
BGK55_RS00315	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
BGK55_RS00405	COG1111	helicase
BGK55_RS00405	COG1205	dead DEAH box helicase
BGK55_RS00410	COG1272	protein, Hemolysin III
BGK55_RS00430	COG0300	oxidoreductase activity
BGK55_RS00435	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS00450	COG2249	NAD(P)H dehydrogenase (quinone) activity
BGK55_RS00475	COG3237	CsbD-like
BGK55_RS00525	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BGK55_RS00535	COG0477	Major facilitator Superfamily
BGK55_RS00575	COG0714	Associated with various cellular activities
BGK55_RS00605	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
BGK55_RS00615	COG4772	TonB-dependent receptor
BGK55_RS00625	COG0662	Cupin 2, conserved barrel domain protein
BGK55_RS00680	COG1304	FMN binding
BGK55_RS00690	COG4585	Histidine kinase
BGK55_RS00695	COG2197	response regulator
BGK55_RS00715	COG3710	Transcriptional regulator
BGK55_RS00720	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BGK55_RS00770	COG0366	Alpha amylase catalytic
BGK55_RS00775	COG0366	Alpha amylase catalytic
BGK55_RS00780	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BGK55_RS00800	COG0657	acetylesterase activity
BGK55_RS00800	COG2755	lipolytic protein G-D-S-L family
BGK55_RS00810	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BGK55_RS00825	COG3507	Belongs to the glycosyl hydrolase 43 family
BGK55_RS00830	COG1609	Transcriptional regulator
BGK55_RS00835	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
BGK55_RS00840	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS00850	COG2755	lipolytic protein G-D-S-L family
BGK55_RS00865	COG3186	Phenylalanine-4-hydroxylase
BGK55_RS00870	COG1522	sequence-specific DNA binding
BGK55_RS00880	COG1752	Esterase of the alpha-beta hydrolase superfamily
BGK55_RS00890	COG1119	ATPase activity
BGK55_RS00905	COG1125	glycine betaine transport
BGK55_RS00920	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BGK55_RS00940	COG1396	sequence-specific DNA binding
BGK55_RS00965	COG0489	protein tyrosine kinase activity
BGK55_RS00970	COG2062	phosphohistidine phosphatase, SixA
BGK55_RS00980	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BGK55_RS01010	COG1881	PFAM PEBP family protein
BGK55_RS01020	COG1968	undecaprenyl-diphosphatase activity
BGK55_RS01025	COG0174	glutamine synthetase
BGK55_RS01030	COG0347	Belongs to the P(II) protein family
BGK55_RS01035	COG0004	ammonium transporteR
BGK55_RS01040	COG3852	Histidine kinase
BGK55_RS01045	COG2204	response regulator
BGK55_RS01050	COG2032	superoxide dismutase activity
BGK55_RS01055	COG2032	superoxide dismutase activity
BGK55_RS01070	COG0183	Belongs to the thiolase family
BGK55_RS01105	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BGK55_RS01110	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
BGK55_RS01115	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
BGK55_RS01130	COG0028	Belongs to the TPP enzyme family
BGK55_RS01135	COG2205	protein histidine kinase activity
BGK55_RS01160	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BGK55_RS01175	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BGK55_RS01185	COG0596	Alpha beta hydrolase
BGK55_RS01190	COG0727	PFAM Uncharacterised protein family (UPF0153)
BGK55_RS01195	COG0318	PFAM AMP-dependent synthetase and ligase
BGK55_RS01205	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BGK55_RS01220	COG1181	Belongs to the D-alanine--D-alanine ligase family
BGK55_RS01230	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BGK55_RS01240	COG0564	pseudouridine synthase activity
BGK55_RS01260	COG1446	asparaginase
BGK55_RS01265	COG0339	signal peptide processing
BGK55_RS01295	COG0475	glutathione-regulated potassium exporter activity
BGK55_RS01300	COG0583	DNA-binding transcription factor activity
BGK55_RS01305	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BGK55_RS01310	COG2224	Isocitrate lyase
BGK55_RS01340	COG4770	biotin carboxylase activity
BGK55_RS01345	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BGK55_RS01350	COG1960	acyl-CoA dehydrogenase activity
BGK55_RS01425	COG0697	spore germination
BGK55_RS01435	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
BGK55_RS01440	COG1846	Transcriptional regulator
BGK55_RS01445	COG1764	response to oxidative stress
BGK55_RS01475	COG2130	NADP-dependent
BGK55_RS01490	COG1187	pseudouridine synthase activity
BGK55_RS01505	COG1643	Atp-dependent helicase
BGK55_RS01510	COG4807	Protein conserved in bacteria
BGK55_RS01515	COG2351	hydroxyisourate hydrolase activity
BGK55_RS01520	COG2072	flavoprotein involved in K transport
BGK55_RS01540	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BGK55_RS01585	COG2252	PERMEase
BGK55_RS01605	COG0084	hydrolase, TatD family'
BGK55_RS01620	COG0583	DNA-binding transcription factor activity
BGK55_RS01625	COG2814	Major facilitator Superfamily
BGK55_RS01640	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BGK55_RS01645	COG1902	pentaerythritol trinitrate reductase activity
BGK55_RS01665	COG0745	RESPONSE REGULATOR receiver
BGK55_RS01670	COG2205	protein histidine kinase activity
BGK55_RS01675	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BGK55_RS01700	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BGK55_RS01705	COG0583	DNA-binding transcription factor activity
BGK55_RS01745	COG0702	epimerase
BGK55_RS01750	COG1733	regulation of RNA biosynthetic process
BGK55_RS01790	COG2801	Transposase and inactivated derivatives
BGK55_RS01800	COG0129	dihydroxy-acid dehydratase activity
BGK55_RS01820	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BGK55_RS01875	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BGK55_RS01880	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BGK55_RS01905	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BGK55_RS01910	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BGK55_RS01925	COG3485	protocatechuate 3,4-dioxygenase
BGK55_RS01940	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BGK55_RS01945	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BGK55_RS01955	COG1414	Transcriptional regulator
BGK55_RS01975	COG0445	tRNA wobble uridine modification
BGK55_RS01985	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BGK55_RS02010	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS02015	COG2267	carboxylic ester hydrolase activity
BGK55_RS02025	COG0156	8-amino-7-oxononanoate synthase activity
BGK55_RS02030	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
BGK55_RS02035	COG1040	competence protein
BGK55_RS02040	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
BGK55_RS02110	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BGK55_RS02185	COG3264	Mechanosensitive ion channel
BGK55_RS02185	COG1511	domain protein
BGK55_RS02190	COG1368	sulfuric ester hydrolase activity
BGK55_RS02195	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BGK55_RS02200	COG2354	Protein conserved in bacteria
BGK55_RS02210	COG0297	glycogen (starch) synthase activity
BGK55_RS02215	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BGK55_RS02220	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BGK55_RS02245	COG0702	epimerase
BGK55_RS02250	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS02290	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS02300	COG0513	Belongs to the DEAD box helicase family
BGK55_RS02305	COG0508	dehydrogenase complex catalyzes the overall conversion of
BGK55_RS02320	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BGK55_RS02330	COG3483	tryptophan 2,3-dioxygenase activity
BGK55_RS02335	COG3104	oligopeptide transport
BGK55_RS02355	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
BGK55_RS02370	COG1320	monovalent cation:proton antiporter activity
BGK55_RS02375	COG2212	antiporter activity
BGK55_RS02385	COG0651	ATP synthesis coupled electron transport
BGK55_RS02390	COG1006	Multisubunit Na H antiporter MnhC subunit
BGK55_RS02395	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BGK55_RS02395	COG2111	Na H antiporter
BGK55_RS02415	COG3179	chitinase
BGK55_RS02435	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
BGK55_RS02440	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
BGK55_RS02455	COG0456	acetyltransferase
BGK55_RS02460	COG0582	viral genome integration into host DNA
BGK55_RS02550	COG1597	lipid kinase activity
BGK55_RS02575	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BGK55_RS02580	COG0134	indole-3-glycerol-phosphate synthase activity
BGK55_RS02590	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BGK55_RS02595	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
BGK55_RS02605	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
BGK55_RS02615	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BGK55_RS02630	COG1051	belongs to the nudix hydrolase family
BGK55_RS02670	COG0316	Belongs to the HesB IscA family
BGK55_RS02690	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
BGK55_RS02705	COG2814	Major facilitator Superfamily
BGK55_RS02715	COG2814	Major facilitator Superfamily
BGK55_RS02720	COG1289	transmembrane transporter activity
BGK55_RS02730	COG0151	Belongs to the GarS family
BGK55_RS02740	COG0138	bifunctional purine biosynthesis protein purh
BGK55_RS02745	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BGK55_RS02750	COG2267	carboxylic ester hydrolase activity
BGK55_RS02755	COG2453	phosphatase
BGK55_RS02755	COG0671	phosphoesterase, PA-phosphatase related
BGK55_RS02785	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
BGK55_RS02810	COG2264	protein methyltransferase activity
BGK55_RS02825	COG0439	Biotin carboxylase
BGK55_RS02835	COG0511	ligase activity, forming carbon-carbon bonds
BGK55_RS02840	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
BGK55_RS02850	COG1324	tolerance protein
BGK55_RS02875	COG0300	oxidoreductase activity
BGK55_RS02880	COG2356	endonuclease I
BGK55_RS02895	COG0459	protein refolding
BGK55_RS02910	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BGK55_RS02925	COG3386	PFAM SMP-30 Gluconolaconase
BGK55_RS02935	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
BGK55_RS02940	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BGK55_RS02960	COG0778	Nitroreductase
BGK55_RS02965	COG2353	YceI-like domain
BGK55_RS02995	COG3052	prosthetic group binding
BGK55_RS03020	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BGK55_RS03030	COG1802	Transcriptional regulator
BGK55_RS03035	COG0546	phosphoglycolate phosphatase activity
BGK55_RS03105	COG4221	oxidoreductase activity
BGK55_RS03115	COG0435	Glutathione S-transferase
BGK55_RS03140	COG2409	Drug exporters of the RND superfamily
BGK55_RS03145	COG1506	peptidase
BGK55_RS03145	COG0823	Involved in the tonB-independent uptake of proteins
BGK55_RS03175	COG0697	spore germination
BGK55_RS03190	COG1113	amino acid transport
BGK55_RS03210	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
BGK55_RS03250	COG5001	Diguanylate cyclase
BGK55_RS03255	COG0840	transmembrane signaling receptor activity
BGK55_RS03260	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
BGK55_RS03260	COG5297	Belongs to the glycosyl hydrolase family 6
BGK55_RS03265	COG0659	secondary active sulfate transmembrane transporter activity
BGK55_RS03285	COG2943	transferase activity, transferring hexosyl groups
BGK55_RS03295	COG3275	phosphorelay sensor kinase activity
BGK55_RS03305	COG0181	hydroxymethylbilane synthase activity
BGK55_RS03330	COG1505	serine-type exopeptidase activity
BGK55_RS03340	COG0436	Aminotransferase
BGK55_RS03350	COG2832	Protein of unknown function (DUF454)
BGK55_RS03360	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
BGK55_RS03370	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
BGK55_RS03375	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
BGK55_RS03380	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
BGK55_RS03405	COG2226	methyltransferase
BGK55_RS03410	COG2199	diguanylate cyclase activity
BGK55_RS03415	COG0308	aminopeptidase N
BGK55_RS03455	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
BGK55_RS03465	COG3284	Transcriptional regulator
BGK55_RS03470	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BGK55_RS03475	COG1077	Cell shape determining protein MreB Mrl
BGK55_RS03480	COG1792	Involved in formation and maintenance of cell shape
BGK55_RS03495	COG0772	Belongs to the SEDS family
BGK55_RS03505	COG2951	lytic endotransglycosylase activity
BGK55_RS03510	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BGK55_RS03520	COG1686	Belongs to the peptidase S11 family
BGK55_RS03530	COG2921	Belongs to the UPF0250 family
BGK55_RS03535	COG0321	lipoyl(octanoyl) transferase activity
BGK55_RS03540	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
BGK55_RS03555	COG0583	DNA-binding transcription factor activity
BGK55_RS03565	COG1051	belongs to the nudix hydrolase family
BGK55_RS03565	COG1056	cytidyltransferase-related domain
BGK55_RS03600	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
BGK55_RS03605	COG0673	inositol 2-dehydrogenase activity
BGK55_RS03610	COG2823	Periplasmic or secreted lipoprotein
BGK55_RS03615	COG4251	negative regulation of phosphorylation
BGK55_RS03620	COG0784	Response regulator, receiver
BGK55_RS03625	COG4191	Histidine kinase
BGK55_RS03630	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BGK55_RS03685	COG1459	type II secretion system
BGK55_RS03705	COG4795	General secretion pathway protein
BGK55_RS03735	COG3250	beta-galactosidase activity
BGK55_RS03750	COG2188	Transcriptional regulator
BGK55_RS03760	COG1609	Transcriptional regulator
BGK55_RS03765	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BGK55_RS03770	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BGK55_RS03780	COG0617	tRNA 3'-terminal CCA addition
BGK55_RS03785	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
BGK55_RS03790	COG1012	belongs to the aldehyde dehydrogenase family
BGK55_RS03795	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BGK55_RS03810	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BGK55_RS03825	COG0218	Necessary for normal cell division and for the maintenance of normal septation
BGK55_RS03830	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
BGK55_RS03845	COG2205	protein histidine kinase activity
BGK55_RS03875	COG3791	Glutathione-dependent formaldehyde-activating
BGK55_RS03890	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BGK55_RS03900	COG0697	spore germination
BGK55_RS03910	COG0488	(ABC) transporter
BGK55_RS03920	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BGK55_RS03925	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BGK55_RS03935	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BGK55_RS03935	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BGK55_RS03955	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
BGK55_RS03960	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BGK55_RS03965	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
BGK55_RS03985	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
BGK55_RS03990	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
BGK55_RS03995	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
BGK55_RS04000	COG2205	protein histidine kinase activity
BGK55_RS04005	COG0745	RESPONSE REGULATOR receiver
BGK55_RS04020	COG0277	FAD linked oxidase domain protein
BGK55_RS04025	COG1988	membrane-bound metal-dependent
BGK55_RS04030	COG0792	nuclease activity
BGK55_RS04065	COG0275	rRNA processing
BGK55_RS04070	COG3116	cell division
BGK55_RS04080	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BGK55_RS04085	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BGK55_RS04090	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BGK55_RS04100	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BGK55_RS04105	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BGK55_RS04110	COG1181	Belongs to the D-alanine--D-alanine ligase family
BGK55_RS04115	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BGK55_RS04130	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
BGK55_RS04140	COG0739	heme binding
BGK55_RS04145	COG0653	protein targeting
BGK55_RS04150	COG0494	nUDIX hydrolase
BGK55_RS04160	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BGK55_RS04170	COG3321	synthase
BGK55_RS04170	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS04170	COG0604	alcohol dehydrogenase
BGK55_RS04195	COG0366	Alpha amylase catalytic
BGK55_RS04225	COG2226	methyltransferase
BGK55_RS04230	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
BGK55_RS04240	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BGK55_RS04275	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BGK55_RS04285	COG4106	trans-aconitate 2-methyltransferase activity
BGK55_RS04290	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BGK55_RS04300	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BGK55_RS04305	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BGK55_RS04310	COG0667	Aldo Keto reductase
BGK55_RS04320	COG4771	TonB-dependent receptor
BGK55_RS04340	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BGK55_RS04345	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
BGK55_RS04355	COG2175	clavaminate synthase activity
BGK55_RS04365	COG4181	ATPase activity
BGK55_RS04380	COG0642	Histidine kinase
BGK55_RS04395	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BGK55_RS04415	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BGK55_RS04420	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BGK55_RS04435	COG3829	transcription factor binding
BGK55_RS04445	COG1116	anion transmembrane transporter activity
BGK55_RS04450	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BGK55_RS04460	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BGK55_RS04465	COG0431	NADPH-dependent FMN reductase
BGK55_RS04490	COG0747	negative chemotaxis
BGK55_RS04510	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BGK55_RS04515	COG2967	ApaG domain
BGK55_RS04520	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
BGK55_RS04525	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BGK55_RS04530	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BGK55_RS04535	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
BGK55_RS04545	COG0123	including yeast histone deacetylase and acetoin utilization protein
BGK55_RS04550	COG2096	Adenosyltransferase
BGK55_RS04560	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BGK55_RS04565	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BGK55_RS04605	COG3384	dioxygenase
BGK55_RS04610	COG0583	DNA-binding transcription factor activity
BGK55_RS04615	COG0318	PFAM AMP-dependent synthetase and ligase
BGK55_RS04625	COG1024	Enoyl-CoA hydratase
BGK55_RS04645	COG3386	PFAM SMP-30 Gluconolaconase
BGK55_RS04690	COG0697	spore germination
BGK55_RS04700	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BGK55_RS04725	COG2197	response regulator
BGK55_RS04735	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BGK55_RS04745	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BGK55_RS04750	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BGK55_RS04755	COG0583	DNA-binding transcription factor activity
BGK55_RS04760	COG3634	alkyl hydroperoxide reductase activity
BGK55_RS04770	COG2890	protein-(glutamine-N5) methyltransferase activity
BGK55_RS04790	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BGK55_RS04790	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BGK55_RS04820	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
BGK55_RS04845	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
BGK55_RS04860	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BGK55_RS04875	COG1404	Belongs to the peptidase S8 family
BGK55_RS04880	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BGK55_RS04905	COG1295	ribonuclease BN
BGK55_RS04910	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BGK55_RS04915	COG1254	Belongs to the acylphosphatase family
BGK55_RS04930	COG0521	Mo-molybdopterin cofactor biosynthetic process
BGK55_RS04940	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BGK55_RS04945	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
BGK55_RS04955	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
BGK55_RS04960	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
BGK55_RS04970	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BGK55_RS04975	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
BGK55_RS04980	COG0193	aminoacyl-tRNA hydrolase activity
BGK55_RS04985	COG0012	GTP binding
BGK55_RS05005	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BGK55_RS05020	COG0250	Participates in transcription elongation, termination and antitermination
BGK55_RS05025	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BGK55_RS05030	COG0081	regulation of translation
BGK55_RS05035	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BGK55_RS05040	COG0222	ribosome binding
BGK55_RS05045	COG0085	RNA polymerase activity
BGK55_RS05050	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BGK55_RS05055	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BGK55_RS05060	COG0049	tRNA binding
BGK55_RS05065	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BGK55_RS05070	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BGK55_RS05075	COG0051	transcription antitermination factor activity, RNA binding
BGK55_RS05080	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BGK55_RS05085	COG0088	Forms part of the polypeptide exit tunnel
BGK55_RS05090	COG0089	rRNA binding
BGK55_RS05095	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BGK55_RS05100	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BGK55_RS05110	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BGK55_RS05115	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BGK55_RS05120	COG0255	Belongs to the universal ribosomal protein uL29 family
BGK55_RS05125	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BGK55_RS05135	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BGK55_RS05140	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BGK55_RS05150	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BGK55_RS05155	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BGK55_RS05160	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BGK55_RS05170	COG1841	ribosomal large subunit assembly
BGK55_RS05175	COG0200	Binds to the 23S rRNA
BGK55_RS05180	COG0201	protein transport
BGK55_RS05205	COG0203	ribosomal protein L17
BGK55_RS05210	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
BGK55_RS05225	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
BGK55_RS05235	COG0154	amidase activity
BGK55_RS05245	COG1217	gtp-binding protein TYPA
BGK55_RS05250	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BGK55_RS05255	COG0039	L-malate dehydrogenase activity
BGK55_RS05270	COG0625	glutathione transferase activity
BGK55_RS05280	COG1902	pentaerythritol trinitrate reductase activity
BGK55_RS05280	COG0446	pyridine nucleotide-disulphide oxidoreductase
BGK55_RS05285	COG0604	alcohol dehydrogenase
BGK55_RS05310	COG0156	8-amino-7-oxononanoate synthase activity
BGK55_RS05315	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
BGK55_RS05320	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
BGK55_RS05325	COG4208	sulfate ABC transporter
BGK55_RS05330	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
BGK55_RS05340	COG1063	alcohol dehydrogenase
BGK55_RS05370	COG0406	alpha-ribazole phosphatase activity
BGK55_RS05375	COG0285	dihydrofolate synthase activity
BGK55_RS05395	COG2833	Protein of unknown function (DUF455)
BGK55_RS05405	COG3291	Pkd domain containing protein
BGK55_RS05415	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BGK55_RS05420	COG0671	phosphoesterase, PA-phosphatase related
BGK55_RS05425	COG0438	transferase activity, transferring glycosyl groups
BGK55_RS05435	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BGK55_RS05450	COG4783	chaperone-mediated protein folding
BGK55_RS05465	COG0473	3-isopropylmalate dehydrogenase activity
BGK55_RS05535	COG3179	chitinase
BGK55_RS05580	COG4695	Portal protein
BGK55_RS05600	COG0189	ligase activity
BGK55_RS05610	COG0745	RESPONSE REGULATOR receiver
BGK55_RS05615	COG5002	protein histidine kinase activity
BGK55_RS05645	COG0237	dephospho-CoA kinase activity
BGK55_RS05650	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
BGK55_RS05710	COG0045	succinate-CoA ligase (ADP-forming) activity
BGK55_RS05730	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
BGK55_RS05730	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BGK55_RS05740	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BGK55_RS05745	COG0564	pseudouridine synthase activity
BGK55_RS05760	COG3011	Protein conserved in bacteria
BGK55_RS05765	COG0840	transmembrane signaling receptor activity
BGK55_RS05780	COG3387	PFAM Glycoside hydrolase 15-related
BGK55_RS05785	COG1877	trehalose-phosphatase activity
BGK55_RS05825	COG2827	Endonuclease containing a URI domain
BGK55_RS05830	COG4771	TonB-dependent receptor
BGK55_RS05835	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BGK55_RS05845	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BGK55_RS05860	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BGK55_RS05865	COG1116	anion transmembrane transporter activity
BGK55_RS05870	COG0542	response to heat
BGK55_RS05875	COG4206	TonB-dependent receptor
BGK55_RS05895	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
BGK55_RS05905	COG1492	cobalamin metabolic process
BGK55_RS05915	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
BGK55_RS05935	COG0019	diaminopimelate decarboxylase activity
BGK55_RS05950	COG4264	IucA IucC family
BGK55_RS05960	COG4772	TonB-dependent receptor
BGK55_RS05985	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BGK55_RS05985	COG4651	solute:proton antiporter activity
BGK55_RS06020	COG0488	(ABC) transporter
BGK55_RS06055	COG0477	Major facilitator Superfamily
BGK55_RS06070	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
BGK55_RS06085	COG0217	transcriptional regulatory protein
BGK55_RS06090	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
BGK55_RS06095	COG0632	four-way junction helicase activity
BGK55_RS06100	COG3158	transport of potassium into the cell
BGK55_RS06110	COG2255	four-way junction helicase activity
BGK55_RS06115	COG0824	Thioesterase
BGK55_RS06125	COG0848	biopolymer transport protein
BGK55_RS06135	COG0823	Involved in the tonB-independent uptake of proteins
BGK55_RS06140	COG2885	chlorophyll binding
BGK55_RS06150	COG0602	queuosine metabolic process
BGK55_RS06160	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
BGK55_RS06165	COG3920	Histidine kinase
BGK55_RS06185	COG0840	transmembrane signaling receptor activity
BGK55_RS06215	COG0514	ATP-dependent DNA helicase (RecQ)
BGK55_RS06220	COG0783	Belongs to the Dps family
BGK55_RS06225	COG1643	Atp-dependent helicase
BGK55_RS06240	COG0837	glucose binding
BGK55_RS06255	COG0535	radical SAM domain protein
BGK55_RS06260	COG0535	radical SAM domain protein
BGK55_RS06265	COG5424	Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ
BGK55_RS06270	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
BGK55_RS06275	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BGK55_RS06285	COG1215	transferase activity, transferring glycosyl groups
BGK55_RS06290	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BGK55_RS06300	COG1199	ATP-dependent helicase activity
BGK55_RS06305	COG1214	PFAM Peptidase M22, glycoprotease
BGK55_RS06310	COG1397	ADP-ribosylglycohydrolase
BGK55_RS06320	COG0189	ligase activity
BGK55_RS06335	COG0835	chemotaxis
BGK55_RS06340	COG0840	transmembrane signaling receptor activity
BGK55_RS06345	COG2198	Histidine kinase
BGK55_RS06345	COG0643	Histidine kinase
BGK55_RS06345	COG0784	Response regulator, receiver
BGK55_RS06345	COG0643	Histidine kinase
BGK55_RS06345	COG0784	Response regulator, receiver
BGK55_RS06345	COG2198	Histidine kinase
BGK55_RS06370	COG1446	asparaginase
BGK55_RS06375	COG3142	Participates in the control of copper homeostasis
BGK55_RS06410	COG3537	Alpha-1,2-mannosidase
BGK55_RS06435	COG1472	Belongs to the glycosyl hydrolase 3 family
BGK55_RS06450	COG1388	LysM domain
BGK55_RS06450	COG3858	chitin binding
BGK55_RS06465	COG0837	glucose binding
BGK55_RS06470	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BGK55_RS06480	COG0494	nUDIX hydrolase
BGK55_RS06490	COG3956	TIGRFAM MazG family protein
BGK55_RS06495	COG1742	UPF0060 membrane protein
BGK55_RS06505	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BGK55_RS06510	COG0509	glycine decarboxylation via glycine cleavage system
BGK55_RS06535	COG1960	acyl-CoA dehydrogenase activity
BGK55_RS06545	COG1309	transcriptional regulator
BGK55_RS06565	COG4771	TonB-dependent receptor
BGK55_RS06575	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BGK55_RS06580	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BGK55_RS06585	COG0463	Glycosyl transferase, family 2
BGK55_RS06590	COG0517	IMP dehydrogenase activity
BGK55_RS06590	COG0516	GMP reductase activity
BGK55_RS06595	COG2982	Protein involved in outer membrane biogenesis
BGK55_RS06600	COG1272	protein, Hemolysin III
BGK55_RS06605	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BGK55_RS06610	COG0739	heme binding
BGK55_RS06615	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BGK55_RS06620	COG0626	cystathionine gamma-synthase activity
BGK55_RS06625	COG0527	aspartate kinase activity
BGK55_RS06625	COG0460	homoserine dehydrogenase
BGK55_RS06635	COG1760	l-serine dehydratase
BGK55_RS06655	COG2353	YceI-like domain
BGK55_RS06660	COG2205	protein histidine kinase activity
BGK55_RS06660	COG0784	Response regulator, receiver
BGK55_RS06660	COG2198	Histidine kinase
BGK55_RS06680	COG0477	Major facilitator Superfamily
BGK55_RS06685	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
BGK55_RS06695	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
BGK55_RS06700	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BGK55_RS06705	COG0259	pyridoxamine-phosphate oxidase activity
BGK55_RS06715	COG1842	Phage shock protein A
BGK55_RS06740	COG0754	glutathionylspermidine amidase activity
BGK55_RS06750	COG2814	Major facilitator Superfamily
BGK55_RS06820	COG0531	amino acid
BGK55_RS06825	COG2197	response regulator
BGK55_RS06845	COG1113	amino acid transport
BGK55_RS06855	COG1271	oxidase subunit
BGK55_RS06860	COG1294	oxidase, subunit
BGK55_RS06875	COG2239	Acts as a magnesium transporter
BGK55_RS06880	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BGK55_RS06885	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BGK55_RS06895	COG1660	Displays ATPase and GTPase activities
BGK55_RS06900	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
BGK55_RS06905	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BGK55_RS06920	COG1137	ATPase activity
BGK55_RS06925	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
BGK55_RS06935	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
BGK55_RS06945	COG0271	Belongs to the BolA IbaG family
BGK55_RS06950	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BGK55_RS06970	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BGK55_RS06985	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
BGK55_RS06995	COG0628	permease
BGK55_RS07005	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BGK55_RS07025	COG1555	photosystem II stabilization
BGK55_RS07040	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BGK55_RS07045	COG1477	protein flavinylation
BGK55_RS07070	COG3128	pkhd-type hydroxylase
BGK55_RS07075	COG4774	siderophore transport
BGK55_RS07080	COG2146	nitrite reductase [NAD(P)H] activity
BGK55_RS07090	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BGK55_RS07095	COG0719	Fe-S assembly protein
BGK55_RS07100	COG0396	ATPase activity
BGK55_RS07105	COG0719	Fe-S assembly protein
BGK55_RS07110	COG1959	2 iron, 2 sulfur cluster binding
BGK55_RS07120	COG0693	protein deglycase activity
BGK55_RS07140	COG0739	heme binding
BGK55_RS07155	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BGK55_RS07190	COG1678	Uncharacterized ACR, COG1678
BGK55_RS07195	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BGK55_RS07200	COG0540	Belongs to the ATCase OTCase family
BGK55_RS07205	COG1764	response to oxidative stress
BGK55_RS07215	COG0384	phenazine biosynthesis protein PhzF
BGK55_RS07220	COG0384	phenazine biosynthesis protein PhzF
BGK55_RS07225	COG0527	aspartate kinase activity
BGK55_RS07240	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BGK55_RS07255	COG0142	geranyltranstransferase activity
BGK55_RS07260	COG0629	single-stranded DNA binding
BGK55_RS07265	COG3706	GGDEF domain
BGK55_RS07265	COG2203	Gaf domain
BGK55_RS07265	COG5001	Diguanylate cyclase
BGK55_RS07265	COG4251	negative regulation of phosphorylation
BGK55_RS07270	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS07270	COG3321	synthase
BGK55_RS07270	COG0604	alcohol dehydrogenase
BGK55_RS07275	COG2080	2 iron, 2 sulfur cluster binding
BGK55_RS07280	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
BGK55_RS07285	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BGK55_RS07290	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
BGK55_RS07335	COG2879	small protein
BGK55_RS07340	COG1966	Carbon starvation protein
BGK55_RS07345	COG1741	Belongs to the pirin family
BGK55_RS07360	COG1741	Belongs to the pirin family
BGK55_RS07370	COG1515	deoxyribonuclease V activity
BGK55_RS07375	COG0588	phosphoglycerate mutase activity
BGK55_RS07390	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BGK55_RS07395	COG2201	protein-glutamate methylesterase activity
BGK55_RS07400	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BGK55_RS07405	COG2202	Pas domain
BGK55_RS07405	COG2200	EAL domain
BGK55_RS07405	COG2199	diguanylate cyclase activity
BGK55_RS07410	COG0835	chemotaxis
BGK55_RS07415	COG0840	transmembrane signaling receptor activity
BGK55_RS07420	COG2198	Histidine kinase
BGK55_RS07420	COG0643	Histidine kinase
BGK55_RS07460	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BGK55_RS07470	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
BGK55_RS07475	COG0745	RESPONSE REGULATOR receiver
BGK55_RS07480	COG2205	protein histidine kinase activity
BGK55_RS07490	COG4452	Inner membrane protein CreD
BGK55_RS07515	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BGK55_RS07520	COG0735	belongs to the Fur family
BGK55_RS07535	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BGK55_RS07545	COG1309	transcriptional regulator
BGK55_RS07550	COG0667	Aldo Keto reductase
BGK55_RS07565	COG2207	Transcriptional regulator
BGK55_RS07575	COG0583	DNA-binding transcription factor activity
BGK55_RS07580	COG2814	Major facilitator Superfamily
BGK55_RS07655	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BGK55_RS07705	COG5002	protein histidine kinase activity
BGK55_RS07705	COG5001	Diguanylate cyclase
BGK55_RS07710	COG1187	pseudouridine synthase activity
BGK55_RS07735	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BGK55_RS07745	COG0475	glutathione-regulated potassium exporter activity
BGK55_RS07755	COG0745	RESPONSE REGULATOR receiver
BGK55_RS07760	COG1538	Outer membrane efflux protein
BGK55_RS07790	COG1132	(ABC) transporter
BGK55_RS07835	COG2155	Conserved Protein
BGK55_RS07860	COG3118	belongs to the thioredoxin family
BGK55_RS07870	COG0495	leucyl-tRNA aminoacylation
BGK55_RS07885	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BGK55_RS07900	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BGK55_RS07915	COG2968	Membrane
BGK55_RS07920	COG0424	maF-like protein
BGK55_RS07930	COG3164	Protein of unknown function
BGK55_RS07940	COG0312	modulator of DNA gyrase
BGK55_RS07945	COG3028	Belongs to the UPF0307 family
BGK55_RS07950	COG0312	modulator of DNA gyrase
BGK55_RS07960	COG4104	PAAR repeat-containing protein
BGK55_RS07965	COG0142	geranyltranstransferase activity
BGK55_RS07970	COG1722	exodeoxyribonuclease VII activity
BGK55_RS07975	COG0037	tRNA processing
BGK55_RS07980	COG1785	Belongs to the alkaline phosphatase family
BGK55_RS07985	COG1301	dicarboxylic acid transport
BGK55_RS07990	COG4106	trans-aconitate 2-methyltransferase activity
BGK55_RS08000	COG0791	NLP P60 protein
BGK55_RS08005	COG0791	NLP P60 protein
BGK55_RS08010	COG1047	Peptidyl-prolyl cis-trans
BGK55_RS08015	COG2311	Membrane
BGK55_RS08020	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BGK55_RS08025	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BGK55_RS08045	COG3590	peptidase
BGK55_RS08050	COG3590	peptidase
BGK55_RS08070	COG0489	protein tyrosine kinase activity
BGK55_RS08075	COG0717	Belongs to the dCTP deaminase family
BGK55_RS08115	COG2801	Transposase and inactivated derivatives
BGK55_RS08120	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BGK55_RS08125	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BGK55_RS08140	COG0494	nUDIX hydrolase
BGK55_RS08145	COG0433	COG0433 Predicted ATPase
BGK55_RS08155	COG0688	phosphatidylethanolamine metabolic process
BGK55_RS08165	COG2890	protein-(glutamine-N5) methyltransferase activity
BGK55_RS08170	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BGK55_RS08175	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BGK55_RS08180	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BGK55_RS08205	COG0101	tRNA pseudouridine synthase activity
BGK55_RS08210	COG0135	phosphoribosylanthranilate isomerase activity
BGK55_RS08220	COG0133	tryptophan synthase activity
BGK55_RS08230	COG0159	tryptophan synthase activity
BGK55_RS08235	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BGK55_RS08240	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BGK55_RS08275	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS08280	COG0149	triose-phosphate isomerase activity
BGK55_RS08295	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BGK55_RS08300	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BGK55_RS08305	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BGK55_RS08310	COG0649	NAD binding
BGK55_RS08315	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
BGK55_RS08320	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
BGK55_RS08330	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
BGK55_RS08335	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BGK55_RS08360	COG1007	ATP synthesis coupled electron transport
BGK55_RS08370	COG0779	Required for maturation of 30S ribosomal subunits
BGK55_RS08375	COG0195	Participates in both transcription termination and antitermination
BGK55_RS08380	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BGK55_RS08385	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BGK55_RS08390	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BGK55_RS08395	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BGK55_RS08400	COG1185	polyribonucleotide nucleotidyltransferase activity
BGK55_RS08435	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
BGK55_RS08445	COG2095	MarC family integral membrane protein
BGK55_RS08455	COG1611	Belongs to the LOG family
BGK55_RS08495	COG0556	nucleotide-excision repair
BGK55_RS08510	COG3505	Type IV secretory pathway VirD4
BGK55_RS08530	COG2948	multi-organism process
BGK55_RS08550	COG3702	type iv secretory pathway
BGK55_RS08595	COG0366	Alpha amylase catalytic
BGK55_RS08605	COG1082	Xylose isomerase domain protein TIM barrel
BGK55_RS08630	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BGK55_RS08635	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BGK55_RS08650	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BGK55_RS08655	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BGK55_RS08655	COG0072	phenylalanine-tRNA ligase activity
BGK55_RS08705	COG0438	transferase activity, transferring glycosyl groups
BGK55_RS08710	COG0438	transferase activity, transferring glycosyl groups
BGK55_RS08720	COG0438	transferase activity, transferring glycosyl groups
BGK55_RS08745	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BGK55_RS08750	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BGK55_RS08755	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BGK55_RS08775	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BGK55_RS08785	COG1960	acyl-CoA dehydrogenase activity
BGK55_RS08800	COG3040	lipid binding
BGK55_RS08815	COG0322	excinuclease ABC activity
BGK55_RS08830	COG4191	Histidine kinase
BGK55_RS08830	COG0784	Response regulator, receiver
BGK55_RS08835	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
BGK55_RS08840	COG1194	a g-specific adenine glycosylase
BGK55_RS08845	COG0552	protein localization to endoplasmic reticulum
BGK55_RS08855	COG3938	Belongs to the proline racemase family
BGK55_RS08860	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BGK55_RS08875	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BGK55_RS08885	COG0006	proline dipeptidase activity
BGK55_RS08900	COG0531	amino acid
BGK55_RS08955	COG4206	TonB-dependent receptor
BGK55_RS08990	COG0326	Molecular chaperone. Has ATPase activity
BGK55_RS08995	COG0742	ribosomal rna small subunit methyltransferase
BGK55_RS09000	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BGK55_RS09010	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BGK55_RS09015	COG0405	Gamma-glutamyltransferase
BGK55_RS09025	COG3291	Pkd domain containing protein
BGK55_RS09030	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BGK55_RS09070	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
BGK55_RS09075	COG0343	queuine tRNA-ribosyltransferase activity
BGK55_RS09080	COG1862	Preprotein translocase
BGK55_RS09090	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BGK55_RS09120	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BGK55_RS09120	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BGK55_RS09125	COG1105	Belongs to the carbohydrate kinase PfkB family
BGK55_RS09130	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BGK55_RS09130	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BGK55_RS09135	COG1609	Transcriptional regulator
BGK55_RS09140	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BGK55_RS09145	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BGK55_RS09155	COG2902	Dehydrogenase
BGK55_RS09170	COG0477	Major facilitator Superfamily
BGK55_RS09180	COG5002	protein histidine kinase activity
BGK55_RS09180	COG0784	Response regulator, receiver
BGK55_RS09180	COG2205	protein histidine kinase activity
BGK55_RS09185	COG2733	membrane
BGK55_RS09195	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BGK55_RS09205	COG2223	nitrite transmembrane transporter activity
BGK55_RS09210	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BGK55_RS09215	COG0243	molybdopterin cofactor binding
BGK55_RS09225	COG0477	Major facilitator Superfamily
BGK55_RS09230	COG2703	oxygen carrier activity
BGK55_RS09245	COG0174	glutamine synthetase
BGK55_RS09250	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
BGK55_RS09265	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BGK55_RS09285	COG3842	ATPase activity
BGK55_RS09290	COG1176	ABC-type spermidine putrescine transport system, permease component I
BGK55_RS09295	COG1177	transmembrane transport
BGK55_RS09305	COG1012	belongs to the aldehyde dehydrogenase family
BGK55_RS09320	COG4535	Mg2 and Co2 transporter CorC
BGK55_RS09330	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BGK55_RS09340	COG1702	phosphate starvation-inducible protein PhoH
BGK55_RS09345	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BGK55_RS09360	COG0741	lytic transglycosylase activity
BGK55_RS09365	COG0723	plastoquinol--plastocyanin reductase activity
BGK55_RS09370	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BGK55_RS09375	COG2857	Cytochrome c1
BGK55_RS09380	COG0625	glutathione transferase activity
BGK55_RS09385	COG2969	positive regulation of protein catabolic process
BGK55_RS09405	COG1201	RNA secondary structure unwinding
BGK55_RS09410	COG2094	Belongs to the DNA glycosylase MPG family
BGK55_RS09415	COG0840	transmembrane signaling receptor activity
BGK55_RS09420	COG0835	chemotaxis
BGK55_RS09435	COG0835	chemotaxis
BGK55_RS09480	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BGK55_RS09490	COG1570	exodeoxyribonuclease VII activity
BGK55_RS09495	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BGK55_RS09500	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BGK55_RS09500	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BGK55_RS09505	COG0802	atpase or kinase
BGK55_RS09510	COG0860	N-Acetylmuramoyl-L-alanine amidase
BGK55_RS09515	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BGK55_RS09540	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS09545	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BGK55_RS09550	COG0501	Belongs to the peptidase M48B family
BGK55_RS09560	COG2081	HI0933 family
BGK55_RS09565	COG4681	YaeQ
BGK55_RS09575	COG0625	glutathione transferase activity
BGK55_RS09585	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
BGK55_RS09590	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BGK55_RS09595	COG0513	Belongs to the DEAD box helicase family
BGK55_RS09600	COG0488	(ABC) transporter
BGK55_RS09615	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BGK55_RS09620	COG0483	inositol monophosphate 1-phosphatase activity
BGK55_RS09635	COG5001	Diguanylate cyclase
BGK55_RS09635	COG3300	MHYT domain
BGK55_RS09640	COG1509	lysine 2,3-aminomutase activity
BGK55_RS09645	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BGK55_RS09655	COG0402	S-adenosylhomocysteine deaminase activity
BGK55_RS09660	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BGK55_RS09680	COG2801	Transposase and inactivated derivatives
BGK55_RS09720	COG4302	ethanolamine ammonia-lyase activity
BGK55_RS09745	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BGK55_RS09750	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
BGK55_RS09765	COG2166	iron-sulfur cluster assembly
BGK55_RS09770	COG0215	cysteine-tRNA ligase activity
BGK55_RS09780	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BGK55_RS09785	COG0137	argininosuccinate synthase activity
BGK55_RS09795	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BGK55_RS09800	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BGK55_RS09810	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BGK55_RS09815	COG0165	Argininosuccinate lyase
BGK55_RS09825	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BGK55_RS09830	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BGK55_RS09850	COG1294	oxidase, subunit
BGK55_RS09860	COG4988	ABC transporter
BGK55_RS09865	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BGK55_RS09870	COG1278	Cold shock
BGK55_RS09875	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BGK55_RS09895	COG1138	Cytochrome C-type biogenesis protein
BGK55_RS09900	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
BGK55_RS09920	COG4133	protoheme IX ABC transporter activity
BGK55_RS09925	COG0436	Aminotransferase
BGK55_RS09945	COG1187	pseudouridine synthase activity
BGK55_RS09950	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BGK55_RS09955	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BGK55_RS09960	COG2350	Protein conserved in bacteria
BGK55_RS09990	COG1175	transmembrane transport
BGK55_RS09995	COG0395	ABC-type sugar transport system, permease component
BGK55_RS10020	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BGK55_RS10025	COG2957	Belongs to the agmatine deiminase family
BGK55_RS10040	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
BGK55_RS10045	COG0539	negative regulation of cytoplasmic translation
BGK55_RS10050	COG0776	regulation of translation
BGK55_RS10060	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
BGK55_RS10065	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BGK55_RS10075	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BGK55_RS10080	COG0475	glutathione-regulated potassium exporter activity
BGK55_RS10080	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BGK55_RS10090	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BGK55_RS10100	COG0519	Catalyzes the synthesis of GMP from XMP
BGK55_RS10100	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BGK55_RS10105	COG0582	viral genome integration into host DNA
BGK55_RS10140	COG0667	Aldo Keto reductase
BGK55_RS10220	COG3002	Belongs to the UPF0753 family
BGK55_RS10225	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BGK55_RS10230	COG0583	DNA-binding transcription factor activity
BGK55_RS10255	COG2197	response regulator
BGK55_RS10270	COG1335	isochorismatase
BGK55_RS10285	COG2814	Major facilitator Superfamily
BGK55_RS10305	COG1914	H( )-stimulated, divalent metal cation uptake system
BGK55_RS10320	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
BGK55_RS10325	COG0668	transmembrane transport
BGK55_RS10335	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
BGK55_RS10350	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS10355	COG1183	phosphatidylcholine synthase activity
BGK55_RS10365	COG3243	poly(R)-hydroxyalkanoic acid synthase
BGK55_RS10380	COG0723	plastoquinol--plastocyanin reductase activity
BGK55_RS10380	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BGK55_RS10390	COG2183	response to ionizing radiation
BGK55_RS10395	COG2205	protein histidine kinase activity
BGK55_RS10395	COG0784	Response regulator, receiver
BGK55_RS10455	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BGK55_RS10460	COG2801	Transposase and inactivated derivatives
BGK55_RS10485	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BGK55_RS10490	COG0800	Aldolase
BGK55_RS10495	COG0129	dihydroxy-acid dehydratase activity
BGK55_RS10500	COG0363	glucosamine-6-phosphate deaminase activity
BGK55_RS10505	COG0837	glucose binding
BGK55_RS10510	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BGK55_RS10530	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
BGK55_RS10545	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BGK55_RS10550	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
BGK55_RS10560	COG4591	ABC-type transport system involved in lipoprotein release permease component
BGK55_RS10565	COG1136	(ABC) transporter
BGK55_RS10580	COG0811	peptide transport
BGK55_RS10590	COG1132	(ABC) transporter
BGK55_RS10595	COG1663	tetraacyldisaccharide 4'-kinase activity
BGK55_RS10600	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
BGK55_RS10605	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BGK55_RS10615	COG0322	excinuclease ABC activity
BGK55_RS10620	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BGK55_RS10655	COG0784	Response regulator, receiver
BGK55_RS10655	COG0643	Histidine kinase
BGK55_RS10655	COG2198	Histidine kinase
BGK55_RS10685	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BGK55_RS10715	COG3318	Belongs to the UPF0149 family
BGK55_RS10715	COG3012	SEC-C Motif Domain Protein
BGK55_RS10735	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BGK55_RS10745	COG1684	flagellar biosynthetic protein fliR
BGK55_RS10760	COG3190	flagellar
BGK55_RS10810	COG1677	Flagellar hook-basal body complex protein FliE
BGK55_RS10855	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS10860	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS10865	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BGK55_RS10885	COG2201	protein-glutamate methylesterase activity
BGK55_RS10915	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BGK55_RS10920	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BGK55_RS10925	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BGK55_RS10935	COG1705	Flagellar rod assembly protein muramidase FlgJ
BGK55_RS10935	COG3951	Flagellar rod assembly protein muramidase FlgJ
BGK55_RS10940	COG1706	bacterial-type flagellum-dependent cell motility
BGK55_RS10945	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
BGK55_RS10955	COG4787	bacterial-type flagellum-dependent cell motility
BGK55_RS10965	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BGK55_RS10970	COG1558	bacterial-type flagellum-dependent cell motility
BGK55_RS10980	COG0835	chemotaxis
BGK55_RS10980	COG0784	Response regulator, receiver
BGK55_RS11000	COG5002	protein histidine kinase activity
BGK55_RS11030	COG2915	High frequency lysogenization protein hflD homolog
BGK55_RS11035	COG0482	sulfurtransferase activity
BGK55_RS11050	COG0542	response to heat
BGK55_RS11060	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
BGK55_RS11070	COG0492	ferredoxin-NADP+ reductase activity
BGK55_RS11075	COG1674	ftsk spoiiie
BGK55_RS11085	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
BGK55_RS11095	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BGK55_RS11100	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BGK55_RS11105	COG0183	Belongs to the thiolase family
BGK55_RS11110	COG1250	3-hydroxyacyl-CoA dehydrogenase
BGK55_RS11110	COG1024	Enoyl-CoA hydratase
BGK55_RS11125	COG0820	rRNA (adenine-C2-)-methyltransferase activity
BGK55_RS11135	COG1426	Protein conserved in bacteria
BGK55_RS11145	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BGK55_RS11150	COG1160	GTP binding
BGK55_RS11155	COG0303	'Molybdopterin
BGK55_RS11160	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BGK55_RS11275	COG2801	Transposase and inactivated derivatives
BGK55_RS11290	COG0708	Exodeoxyribonuclease III
BGK55_RS11300	COG0303	'Molybdopterin
BGK55_RS11305	COG0746	molybdenum cofactor guanylyltransferase activity
BGK55_RS11315	COG1648	precorrin-2 dehydrogenase activity
BGK55_RS11315	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BGK55_RS11335	COG3685	Protein conserved in bacteria
BGK55_RS11355	COG5001	Diguanylate cyclase
BGK55_RS11365	COG4566	intracellular signal transduction
BGK55_RS11385	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BGK55_RS11405	COG3279	Response regulator of the LytR AlgR family
BGK55_RS11440	COG1238	metal cluster binding
BGK55_RS11480	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
BGK55_RS11480	COG0316	Belongs to the HesB IscA family
BGK55_RS11485	COG2154	pterin-4-alpha-carbinolamine dehydratase
BGK55_RS11495	COG0428	transporter
BGK55_RS11510	COG1530	ribonuclease E activity
BGK55_RS11520	COG1054	Belongs to the UPF0176 family
BGK55_RS11540	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
BGK55_RS11595	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BGK55_RS11600	COG1360	Flagellar Motor Protein
BGK55_RS11610	COG0835	chemotaxis
BGK55_RS11620	COG0745	RESPONSE REGULATOR receiver
BGK55_RS11645	COG0840	transmembrane signaling receptor activity
BGK55_RS11655	COG0840	transmembrane signaling receptor activity
BGK55_RS11660	COG0840	transmembrane signaling receptor activity
BGK55_RS11665	COG0840	transmembrane signaling receptor activity
BGK55_RS11680	COG0840	transmembrane signaling receptor activity
BGK55_RS11690	COG0840	transmembrane signaling receptor activity
BGK55_RS11705	COG0835	chemotaxis
BGK55_RS11715	COG0840	transmembrane signaling receptor activity
BGK55_RS11725	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
BGK55_RS11730	COG2201	protein-glutamate methylesterase activity
BGK55_RS11740	COG2267	carboxylic ester hydrolase activity
BGK55_RS11770	COG0318	PFAM AMP-dependent synthetase and ligase
BGK55_RS11775	COG1024	Enoyl-CoA hydratase
BGK55_RS11780	COG0784	Response regulator, receiver
BGK55_RS11780	COG2205	protein histidine kinase activity
BGK55_RS11780	COG2198	Histidine kinase
BGK55_RS11790	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BGK55_RS11795	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BGK55_RS11800	COG3279	Response regulator of the LytR AlgR family
BGK55_RS11865	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BGK55_RS11875	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BGK55_RS11880	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BGK55_RS11890	COG0505	Belongs to the CarA family
BGK55_RS11895	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
BGK55_RS11900	COG2258	MOSC domain
BGK55_RS11905	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BGK55_RS11950	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BGK55_RS11970	COG0277	FAD linked oxidase domain protein
BGK55_RS11975	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BGK55_RS11985	COG0531	amino acid
BGK55_RS11990	COG0531	amino acid
BGK55_RS11995	COG0235	Class ii aldolase
BGK55_RS12000	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
BGK55_RS12005	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
BGK55_RS12020	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BGK55_RS12020	COG0140	phosphoribosyl-ATP diphosphatase activity
BGK55_RS12025	COG0107	imidazoleglycerol-phosphate synthase activity
BGK55_RS12030	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
BGK55_RS12035	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BGK55_RS12040	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BGK55_RS12040	COG0131	Imidazoleglycerol-phosphate dehydratase
BGK55_RS12045	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BGK55_RS12050	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BGK55_RS12055	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
BGK55_RS12065	COG0124	histidyl-tRNA synthetase
BGK55_RS12070	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BGK55_RS12145	COG1649	PFAM Uncharacterised BCR, COG1649
BGK55_RS12145	COG0726	polysaccharide deacetylase
BGK55_RS12150	COG1215	transferase activity, transferring glycosyl groups
BGK55_RS12175	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
BGK55_RS12175	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
BGK55_RS12320	COG1012	belongs to the aldehyde dehydrogenase family
BGK55_RS12335	COG0167	dihydroorotate dehydrogenase activity
BGK55_RS12340	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BGK55_RS12345	COG0697	spore germination
BGK55_RS12350	COG1794	racemase activity, acting on amino acids and derivatives
BGK55_RS12365	COG0671	phosphoesterase, PA-phosphatase related
BGK55_RS12370	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
BGK55_RS12380	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
BGK55_RS12385	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
BGK55_RS12390	COG3706	GGDEF domain
BGK55_RS12390	COG4251	negative regulation of phosphorylation
BGK55_RS12390	COG5001	Diguanylate cyclase
BGK55_RS12390	COG2203	Gaf domain
BGK55_RS12400	COG1472	Belongs to the glycosyl hydrolase 3 family
BGK55_RS12420	COG0166	Belongs to the GPI family
BGK55_RS12425	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
BGK55_RS12430	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
BGK55_RS12435	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
BGK55_RS12455	COG1469	GTP cyclohydrolase I activity
BGK55_RS12460	COG0860	N-Acetylmuramoyl-L-alanine amidase
BGK55_RS12470	COG0477	Major facilitator Superfamily
BGK55_RS12475	COG2115	Belongs to the xylose isomerase family
BGK55_RS12480	COG1070	Carbohydrate kinase
BGK55_RS12490	COG1501	Belongs to the glycosyl hydrolase 31 family
BGK55_RS12530	COG0800	Aldolase
BGK55_RS12535	COG4948	Mandelate Racemase Muconate Lactonizing
BGK55_RS12545	COG3734	2-keto-3-deoxy-galactonokinase
BGK55_RS12550	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
BGK55_RS12560	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BGK55_RS12575	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BGK55_RS12580	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BGK55_RS12595	COG0351	phosphomethylpyrimidine kinase
BGK55_RS12635	COG0583	DNA-binding transcription factor activity
BGK55_RS12645	COG1741	Belongs to the pirin family
BGK55_RS12660	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
BGK55_RS12665	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BGK55_RS12670	COG2137	regulation of response to DNA damage stimulus
BGK55_RS12675	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BGK55_RS12680	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BGK55_RS12690	COG1546	Belongs to the CinA family
BGK55_RS12695	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BGK55_RS12705	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BGK55_RS12710	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BGK55_RS12720	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
BGK55_RS12725	COG1534	Rna-binding protein
BGK55_RS12740	COG1238	metal cluster binding
BGK55_RS12745	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BGK55_RS12750	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
BGK55_RS12755	COG2840	Smr protein MutS2
BGK55_RS12760	COG0585	pseudouridine synthase activity
BGK55_RS12765	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
BGK55_RS12770	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
BGK55_RS12775	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
BGK55_RS12780	COG0148	phosphopyruvate hydratase activity
BGK55_RS12790	COG2877	3-deoxy-8-phosphooctulonate synthase activity
BGK55_RS12795	COG0504	CTP synthase activity
BGK55_RS12820	COG0306	phosphate transporter
BGK55_RS12830	COG1253	flavin adenine dinucleotide binding
BGK55_RS12845	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BGK55_RS12850	COG0477	Major facilitator Superfamily
BGK55_RS12855	COG1132	(ABC) transporter
BGK55_RS12860	COG1136	(ABC) transporter
BGK55_RS12885	COG2264	protein methyltransferase activity
BGK55_RS12915	COG2244	polysaccharide biosynthetic process
BGK55_RS13005	COG1595	DNA-templated transcription, initiation
BGK55_RS13020	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BGK55_RS13030	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
BGK55_RS13040	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BGK55_RS13055	COG0784	Response regulator, receiver
BGK55_RS13055	COG4191	Histidine kinase
BGK55_RS13095	COG0840	transmembrane signaling receptor activity
BGK55_RS13110	COG0583	DNA-binding transcription factor activity
BGK55_RS13115	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BGK55_RS13120	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BGK55_RS13135	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
BGK55_RS13140	COG1605	Chorismate mutase
BGK55_RS13140	COG0077	Prephenate dehydratase
BGK55_RS13145	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BGK55_RS13150	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BGK55_RS13155	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
BGK55_RS13195	COG1228	amidohydrolase
BGK55_RS13200	COG2986	histidine ammonia-lyase
BGK55_RS13210	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
BGK55_RS13220	COG4993	Dehydrogenase
BGK55_RS13230	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
BGK55_RS13240	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
BGK55_RS13245	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BGK55_RS13250	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BGK55_RS13260	COG3115	cell septum assembly
BGK55_RS13270	COG0359	binds to the 23S rRNA
BGK55_RS13275	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BGK55_RS13280	COG0360	Binds together with S18 to 16S ribosomal RNA
BGK55_RS13285	COG0316	Belongs to the HesB IscA family
BGK55_RS13290	COG0017	Asparaginyl-tRNA synthetase
BGK55_RS13310	COG2808	Putative FMN-binding domain
BGK55_RS13390	COG0288	reversible hydration of carbon dioxide
BGK55_RS13395	COG0662	Cupin 2, conserved barrel domain protein
BGK55_RS13405	COG3844	kynureninase activity
BGK55_RS13410	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BGK55_RS13415	COG2925	Exonuclease
BGK55_RS13440	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BGK55_RS13445	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BGK55_RS13445	COG0116	Belongs to the methyltransferase superfamily
BGK55_RS13450	COG0488	(ABC) transporter
BGK55_RS13485	COG0494	nUDIX hydrolase
BGK55_RS13495	COG1024	Enoyl-CoA hydratase
BGK55_RS13505	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BGK55_RS13510	COG0659	secondary active sulfate transmembrane transporter activity
BGK55_RS13535	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BGK55_RS13540	COG0573	inorganic phosphate transmembrane transporter activity
BGK55_RS13545	COG0581	inorganic phosphate transmembrane transporter activity
BGK55_RS13550	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BGK55_RS13555	COG0704	Plays a role in the regulation of phosphate uptake
BGK55_RS13565	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BGK55_RS13575	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BGK55_RS13585	COG0557	exoribonuclease II activity
BGK55_RS13600	COG1960	acyl-CoA dehydrogenase activity
BGK55_RS13605	COG2226	methyltransferase
BGK55_RS13610	COG1410	methionine synthase
BGK55_RS13610	COG0646	methionine synthase
BGK55_RS13625	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BGK55_RS13650	COG2900	Belongs to the SlyX family
BGK55_RS13665	COG0386	Belongs to the glutathione peroxidase family
BGK55_RS13675	COG1725	Transcriptional regulator
BGK55_RS13680	COG1131	(ABC) transporter
BGK55_RS13710	COG1253	flavin adenine dinucleotide binding
BGK55_RS13730	COG2850	peptidyl-arginine hydroxylation
BGK55_RS13765	COG1132	(ABC) transporter
BGK55_RS13770	COG0583	DNA-binding transcription factor activity
BGK55_RS13805	COG0484	heat shock protein binding
BGK55_RS13810	COG0443	Heat shock 70 kDa protein
BGK55_RS13815	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BGK55_RS13820	COG1420	regulation of RNA biosynthetic process
BGK55_RS13825	COG0497	DNA recombination
BGK55_RS13835	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BGK55_RS13850	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
BGK55_RS13900	COG3706	GGDEF domain
BGK55_RS13945	COG0583	DNA-binding transcription factor activity
BGK55_RS13955	COG0415	Belongs to the DNA photolyase family
BGK55_RS13960	COG0305	Participates in initiation and elongation during chromosome replication
BGK55_RS13970	COG0367	asparagine synthase
BGK55_RS13990	COG1960	acyl-CoA dehydrogenase activity
BGK55_RS14005	COG0084	hydrolase, TatD family'
BGK55_RS14010	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BGK55_RS14065	COG0386	Belongs to the glutathione peroxidase family
BGK55_RS14070	COG0339	signal peptide processing
BGK55_RS14120	COG2814	Major facilitator Superfamily
BGK55_RS14125	COG1566	PFAM secretion protein HlyD family protein
BGK55_RS14150	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BGK55_RS14170	COG4774	siderophore transport
BGK55_RS14180	COG0367	asparagine synthase
BGK55_RS14185	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BGK55_RS14190	COG1393	Belongs to the ArsC family
BGK55_RS14200	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
BGK55_RS14240	COG0052	Belongs to the universal ribosomal protein uS2 family
BGK55_RS14245	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BGK55_RS14255	COG0528	UMP kinase activity
BGK55_RS14260	COG0233	cytoplasmic translational termination
BGK55_RS14265	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BGK55_RS14270	COG0575	Belongs to the CDS family
BGK55_RS14275	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
BGK55_RS14280	COG0750	zinc metalloprotease
BGK55_RS14295	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BGK55_RS14300	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BGK55_RS14305	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BGK55_RS14310	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BGK55_RS14315	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BGK55_RS14325	COG0825	malonyl-CoA metabolic process
BGK55_RS14340	COG1981	membrane
BGK55_RS14360	COG1695	Transcriptional regulator
BGK55_RS14380	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BGK55_RS14390	COG2040	homocysteine
BGK55_RS14395	COG0833	amino acid
BGK55_RS14400	COG0346	lactoylglutathione lyase activity
BGK55_RS14405	COG1131	(ABC) transporter
BGK55_RS14420	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BGK55_RS14420	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BGK55_RS14430	COG2878	Part of a membrane complex involved in electron transport
BGK55_RS14450	COG1595	DNA-templated transcription, initiation
BGK55_RS14475	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BGK55_RS14490	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BGK55_RS14495	COG0251	oxidation-reduction process
BGK55_RS14505	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BGK55_RS14505	COG0392	lysyltransferase activity
BGK55_RS14540	COG2814	Major facilitator Superfamily
BGK55_RS14550	COG2824	Alkylphosphonate utilization operon protein PhnA
BGK55_RS14560	COG1047	Peptidyl-prolyl cis-trans
BGK55_RS14565	COG1077	Cell shape determining protein MreB Mrl
BGK55_RS14585	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BGK55_RS14595	COG5487	UPF0391 membrane protein
BGK55_RS14600	COG1451	nucleotide metabolic process
BGK55_RS14625	COG0183	Belongs to the thiolase family
BGK55_RS14655	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
BGK55_RS14655	COG1793	dna ligase
BGK55_RS14665	COG1793	dna ligase
BGK55_RS14670	COG1201	RNA secondary structure unwinding
BGK55_RS14680	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BGK55_RS14685	COG1278	Cold shock
BGK55_RS14690	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
BGK55_RS14695	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
BGK55_RS14700	COG1472	Belongs to the glycosyl hydrolase 3 family
BGK55_RS14705	COG3046	protein related to deoxyribodipyrimidine photolyase
BGK55_RS14715	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
BGK55_RS14720	COG2954	triphosphatase activity
BGK55_RS14725	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BGK55_RS14735	COG1381	Involved in DNA repair and RecF pathway recombination
BGK55_RS14740	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BGK55_RS14745	COG0571	ribonuclease III activity
BGK55_RS14760	COG0481	GTPase activity
BGK55_RS14765	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BGK55_RS14780	COG1024	Enoyl-CoA hydratase
BGK55_RS14780	COG1250	3-hydroxyacyl-CoA dehydrogenase
BGK55_RS14805	COG1960	acyl-CoA dehydrogenase activity
BGK55_RS14825	COG3867	Arabinogalactan endo-beta-1,4-galactanase
BGK55_RS14845	COG3250	beta-galactosidase activity
BGK55_RS14875	COG3209	COG3209 Rhs family protein
BGK55_RS14880	COG3209	COG3209 Rhs family protein
BGK55_RS14900	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BGK55_RS14910	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
BGK55_RS14935	COG0534	Mate efflux family protein
BGK55_RS14940	COG0335	large ribosomal subunit rRNA binding
BGK55_RS14945	COG0336	Belongs to the RNA methyltransferase TrmD family
BGK55_RS14950	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BGK55_RS14955	COG0228	four-way junction DNA binding
BGK55_RS14960	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BGK55_RS14975	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BGK55_RS14980	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BGK55_RS15010	COG0784	Response regulator, receiver
BGK55_RS15010	COG4191	Histidine kinase
BGK55_RS15015	COG4999	Histidine kinase
BGK55_RS15015	COG2205	protein histidine kinase activity
BGK55_RS15015	COG3850	Histidine kinase
BGK55_RS15015	COG3437	response regulator, receiver
BGK55_RS15020	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BGK55_RS15035	COG5507	3-demethylubiquinone-9 3-methyltransferase
BGK55_RS15045	COG4771	TonB-dependent receptor
BGK55_RS15070	COG2172	sigma factor antagonist activity
BGK55_RS15075	COG1366	Belongs to the anti-sigma-factor antagonist family
BGK55_RS15080	COG1366	Belongs to the anti-sigma-factor antagonist family
BGK55_RS15090	COG0326	Molecular chaperone. Has ATPase activity
BGK55_RS15095	COG2207	Transcriptional regulator
BGK55_RS15105	COG3152	Membrane
BGK55_RS15120	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BGK55_RS15125	COG1845	cytochrome c oxidase, subunit III
BGK55_RS15130	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BGK55_RS15170	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BGK55_RS15170	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
BGK55_RS15260	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
BGK55_RS15265	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BGK55_RS15270	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BGK55_RS15275	COG0196	riboflavin kinase activity
BGK55_RS15280	COG0728	peptidoglycan biosynthetic process
BGK55_RS15285	COG0268	Binds directly to 16S ribosomal RNA
BGK55_RS15290	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BGK55_RS15295	COG0211	Belongs to the bacterial ribosomal protein bL27 family
BGK55_RS15300	COG0261	This protein binds to 23S rRNA in the presence of protein L20
BGK55_RS15305	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BGK55_RS15310	COG0824	Thioesterase
BGK55_RS15325	COG1946	Acyl-CoA thioesterase
BGK55_RS15350	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
BGK55_RS15360	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
BGK55_RS15385	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BGK55_RS15400	COG2197	response regulator
BGK55_RS15405	COG4585	Histidine kinase
BGK55_RS15420	COG0850	regulation of cytokinetic process
BGK55_RS15425	COG2894	cell division
BGK55_RS15430	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
BGK55_RS15440	COG0642	Histidine kinase
BGK55_RS15445	COG0745	RESPONSE REGULATOR receiver
BGK55_RS15460	COG2194	sulfuric ester hydrolase activity
BGK55_RS15475	COG2814	Major facilitator Superfamily
BGK55_RS15480	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BGK55_RS15480	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BGK55_RS15490	COG0656	L-ascorbic acid biosynthetic process
BGK55_RS15495	COG0753	catalase activity
BGK55_RS15525	COG2207	Transcriptional regulator
BGK55_RS15525	COG1917	Cupin 2, conserved barrel domain protein
BGK55_RS15565	COG1297	OPT oligopeptide transporter protein
BGK55_RS15580	COG0587	DNA-directed DNA polymerase activity
BGK55_RS15595	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BGK55_RS15630	COG2080	2 iron, 2 sulfur cluster binding
BGK55_RS15635	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
BGK55_RS15665	COG0492	ferredoxin-NADP+ reductase activity
BGK55_RS15675	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS15680	COG3537	Alpha-1,2-mannosidase
BGK55_RS15685	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS15715	COG2189	Belongs to the N(4) N(6)-methyltransferase family
BGK55_RS15725	COG1196	nuclear chromosome segregation
BGK55_RS15730	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BGK55_RS15755	COG1309	transcriptional regulator
BGK55_RS15760	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS15770	COG0308	aminopeptidase N
BGK55_RS15775	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BGK55_RS15785	COG0330	HflC and HflK could
BGK55_RS15790	COG0330	HflC and HflK could
BGK55_RS15810	COG0678	peroxiredoxin activity
BGK55_RS15820	COG4953	penicillin-binding protein 1C
BGK55_RS15855	COG3609	addiction module antidote protein, CC2985 family
BGK55_RS15875	COG3829	transcription factor binding
BGK55_RS15900	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BGK55_RS15905	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BGK55_RS15920	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS15935	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BGK55_RS15940	COG0333	Belongs to the bacterial ribosomal protein bL32 family
BGK55_RS15945	COG1399	metal-binding, possibly nucleic acid-binding protein
BGK55_RS15950	COG0424	maF-like protein
BGK55_RS15970	COG0714	Associated with various cellular activities
BGK55_RS15990	COG0537	adenosine 5'-monophosphoramidase activity
BGK55_RS15995	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BGK55_RS16000	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BGK55_RS16005	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BGK55_RS16020	COG0314	molybdopterin synthase activity
BGK55_RS16025	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BGK55_RS16030	COG0315	cyclic pyranopterin monophosphate synthase activity
BGK55_RS16040	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BGK55_RS16045	COG1234	tRNA 3'-trailer cleavage
BGK55_RS16050	COG3642	lipopolysaccharide core region biosynthetic process
BGK55_RS16055	COG0859	PFAM glycosyl transferase family 9
BGK55_RS16070	COG0631	protein serine/threonine phosphatase activity
BGK55_RS16075	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BGK55_RS16080	COG0328	RNA-DNA hybrid ribonuclease activity
BGK55_RS16090	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BGK55_RS16100	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BGK55_RS16130	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BGK55_RS16140	COG0544	peptidyl-prolyl cis-trans isomerase activity
BGK55_RS16150	COG3852	Histidine kinase
BGK55_RS16200	COG3621	Patatin-like phospholipase
BGK55_RS16335	COG2022	thiamine diphosphate biosynthetic process
BGK55_RS16340	COG0220	tRNA (guanine-N7-)-methyltransferase activity
BGK55_RS16345	COG3273	potassium ion transport
BGK55_RS16345	COG0471	metal ion transport
BGK55_RS16365	COG1970	mechanosensitive ion channel activity
BGK55_RS16380	COG1609	Transcriptional regulator
BGK55_RS16390	COG3250	beta-galactosidase activity
BGK55_RS16395	COG4948	Mandelate Racemase Muconate Lactonizing
BGK55_RS16410	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BGK55_RS16420	COG0308	aminopeptidase N
BGK55_RS16440	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BGK55_RS16450	COG2895	sulfate adenylyltransferase (ATP) activity
BGK55_RS16450	COG0529	Catalyzes the synthesis of activated sulfate
BGK55_RS16455	COG0175	sulfate reduction
BGK55_RS16460	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BGK55_RS16465	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BGK55_RS16470	COG0175	sulfate reduction
BGK55_RS16490	COG0784	Response regulator, receiver
BGK55_RS16490	COG2198	Histidine kinase
BGK55_RS16490	COG2205	protein histidine kinase activity
BGK55_RS16510	COG1648	precorrin-2 dehydrogenase activity
BGK55_RS16510	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BGK55_RS16525	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
BGK55_RS16530	COG3588	fructose-bisphosphate aldolase
BGK55_RS16535	COG0469	pyruvate kinase activity
BGK55_RS16545	COG0126	phosphoglycerate kinase activity
BGK55_RS16565	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BGK55_RS16575	COG3047	cAMP biosynthetic process
BGK55_RS16580	COG3047	cAMP biosynthetic process
BGK55_RS16590	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BGK55_RS16590	COG3453	Protein conserved in bacteria
BGK55_RS16595	COG0725	ABC transporter, periplasmic molybdate-binding protein
BGK55_RS16600	COG4149	molybdate abc transporter
BGK55_RS16605	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
BGK55_RS16640	COG1376	ErfK ybiS ycfS ynhG family protein
BGK55_RS16645	COG0739	heme binding
BGK55_RS16665	COG4773	Receptor
BGK55_RS16685	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BGK55_RS16690	COG1301	dicarboxylic acid transport
BGK55_RS16700	COG2304	oxidoreductase activity
BGK55_RS16720	COG0714	Associated with various cellular activities
BGK55_RS16750	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BGK55_RS16775	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BGK55_RS16785	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BGK55_RS16795	COG0194	GDP metabolic process
BGK55_RS16800	COG1561	YicC-like family, N-terminal region
BGK55_RS16805	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
BGK55_RS16815	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BGK55_RS16820	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BGK55_RS16835	COG0006	proline dipeptidase activity
BGK55_RS16845	COG0006	proline dipeptidase activity
BGK55_RS16850	COG3079	Belongs to the UPF0149 family
BGK55_RS16870	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BGK55_RS16880	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BGK55_RS16890	COG2912	Transglutaminase-like superfamily
BGK55_RS16895	COG1773	rubredoxin
BGK55_RS16900	COG0352	thiamine-phosphate diphosphorylase activity
BGK55_RS16910	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
BGK55_RS16920	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
BGK55_RS16925	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BGK55_RS16955	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BGK55_RS16960	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BGK55_RS16965	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS16975	COG0671	phosphoesterase, PA-phosphatase related
BGK55_RS16980	COG3781	membrane
BGK55_RS16990	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BGK55_RS16995	COG0563	adenylate kinase activity
BGK55_RS17010	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
BGK55_RS17020	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
BGK55_RS17040	COG3710	Transcriptional regulator
BGK55_RS17045	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
BGK55_RS17055	COG0840	transmembrane signaling receptor activity
BGK55_RS17060	COG0405	Gamma-glutamyltransferase
BGK55_RS17065	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BGK55_RS17085	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BGK55_RS17090	COG0473	3-isopropylmalate dehydrogenase activity
BGK55_RS17095	COG0066	3-isopropylmalate dehydratase activity
BGK55_RS17100	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BGK55_RS17120	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BGK55_RS17125	COG1538	Outer membrane efflux protein
BGK55_RS17130	COG1519	Transferase
BGK55_RS17135	COG1560	Kdo2-lipid A biosynthetic process
BGK55_RS17160	COG0281	malic enzyme
BGK55_RS17160	COG0280	phosphate acetyltransferase
BGK55_RS17165	COG1301	dicarboxylic acid transport
BGK55_RS17195	COG0583	DNA-binding transcription factor activity
BGK55_RS17205	COG0667	Aldo Keto reductase
BGK55_RS17220	COG2197	response regulator
BGK55_RS17230	COG0642	Histidine kinase
BGK55_RS17245	COG2851	Citrate transporter
BGK55_RS17250	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS17255	COG1609	Transcriptional regulator
BGK55_RS17260	COG2211	Major facilitator Superfamily
BGK55_RS17285	COG1162	GTPase activity
BGK55_RS17345	COG4773	Receptor
BGK55_RS17350	COG0726	polysaccharide deacetylase
BGK55_RS17355	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
BGK55_RS17370	COG3964	amidohydrolase
BGK55_RS17375	COG0402	S-adenosylhomocysteine deaminase activity
BGK55_RS17395	COG1307	EDD domain protein, DegV family
BGK55_RS17400	COG0242	peptide deformylase activity
BGK55_RS17425	COG0457	Tetratricopeptide repeat
BGK55_RS17430	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
BGK55_RS17435	COG1215	transferase activity, transferring glycosyl groups
BGK55_RS17440	COG1215	transferase activity, transferring glycosyl groups
BGK55_RS17455	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BGK55_RS17505	COG2188	Transcriptional regulator
BGK55_RS17515	COG1450	Type ii and iii secretion system protein
BGK55_RS17530	COG3166	PFAM Fimbrial assembly family protein
BGK55_RS17535	COG3156	type II secretion system protein K
BGK55_RS17540	COG4795	General secretion pathway protein
BGK55_RS17545	COG2165	general secretion pathway protein
BGK55_RS17550	COG4970	Tfp pilus assembly protein FimT
BGK55_RS17555	COG2165	general secretion pathway protein
BGK55_RS17560	COG1459	type II secretion system
BGK55_RS17565	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BGK55_RS17570	COG1404	Belongs to the peptidase S8 family
BGK55_RS17580	COG1404	Belongs to the peptidase S8 family
BGK55_RS17590	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BGK55_RS17590	COG0047	phosphoribosylformylglycinamidine synthase activity
BGK55_RS17595	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BGK55_RS17600	COG4974	Belongs to the 'phage' integrase family
BGK55_RS17615	COG0795	lipopolysaccharide-transporting ATPase activity
BGK55_RS17625	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BGK55_RS17640	COG0525	valine-tRNA ligase activity
BGK55_RS17670	COG1183	phosphatidylcholine synthase activity
BGK55_RS17680	COG0442	prolyl-tRNA aminoacylation
BGK55_RS17695	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BGK55_RS17700	COG1127	ABC transporter
BGK55_RS17705	COG3218	ABC-type transport auxiliary lipoprotein component
BGK55_RS17705	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BGK55_RS17735	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BGK55_RS17740	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
BGK55_RS17740	COG0662	Cupin 2, conserved barrel domain protein
BGK55_RS17770	COG2086	electron transfer activity
BGK55_RS17785	COG0463	Glycosyl transferase, family 2
BGK55_RS17800	COG2813	Specifically methylates the guanine in position
BGK55_RS17820	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
BGK55_RS17825	COG0438	transferase activity, transferring glycosyl groups
BGK55_RS17845	COG0438	transferase activity, transferring glycosyl groups
BGK55_RS17855	COG0626	cystathionine gamma-synthase activity
BGK55_RS17885	COG0625	glutathione transferase activity
BGK55_RS17895	COG0513	Belongs to the DEAD box helicase family
BGK55_RS17905	COG4206	TonB-dependent receptor
BGK55_RS17910	COG0720	synthase
BGK55_RS17920	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BGK55_RS17930	COG1956	GAF domain-containing protein
BGK55_RS17940	COG2819	hydrolase of the alpha beta superfamily
BGK55_RS17955	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BGK55_RS17960	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BGK55_RS17975	COG0339	signal peptide processing
BGK55_RS18025	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BGK55_RS18030	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BGK55_RS18035	COG1136	(ABC) transporter
BGK55_RS18040	COG0577	efflux transmembrane transporter activity
BGK55_RS18040	COG1136	(ABC) transporter
BGK55_RS18045	COG0577	efflux transmembrane transporter activity
BGK55_RS18060	COG4191	Histidine kinase
BGK55_RS18065	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BGK55_RS18080	COG0355	proton-transporting ATP synthase activity, rotational mechanism
BGK55_RS18085	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BGK55_RS18090	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BGK55_RS18095	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BGK55_RS18100	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BGK55_RS18105	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BGK55_RS18115	COG0356	it plays a direct role in the translocation of protons across the membrane
BGK55_RS18135	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BGK55_RS18145	COG0508	dehydrogenase complex catalyzes the overall conversion of
BGK55_RS18190	COG2011	ABC-type metal ion transport system permease component
BGK55_RS18195	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BGK55_RS18200	COG0697	spore germination
BGK55_RS18205	COG1666	GTP binding
BGK55_RS18215	COG0784	Response regulator, receiver
BGK55_RS18215	COG5002	protein histidine kinase activity
BGK55_RS18215	COG2198	Histidine kinase
BGK55_RS18240	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BGK55_RS18250	COG2813	Specifically methylates the guanine in position
BGK55_RS18270	COG2202	Pas domain
BGK55_RS18270	COG2205	protein histidine kinase activity
BGK55_RS18290	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BGK55_RS18295	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BGK55_RS18350	COG0842	Transport permease protein
BGK55_RS18355	COG1131	(ABC) transporter
BGK55_RS18360	COG0025	NhaP-type Na H and K H
BGK55_RS18365	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
BGK55_RS18370	COG1573	uracil-dna glycosylase
BGK55_RS18380	COG3384	dioxygenase
BGK55_RS18390	COG0583	DNA-binding transcription factor activity
BGK55_RS18400	COG0667	Aldo Keto reductase
BGK55_RS18410	COG3590	peptidase
BGK55_RS18430	COG0531	amino acid
BGK55_RS18460	COG3685	Protein conserved in bacteria
BGK55_RS18465	COG3546	catalase activity
BGK55_RS18510	COG1271	oxidase subunit
BGK55_RS18515	COG1294	oxidase, subunit
BGK55_RS18530	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS18535	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BGK55_RS18555	COG1132	(ABC) transporter
BGK55_RS18570	COG1063	alcohol dehydrogenase
BGK55_RS18650	COG0583	DNA-binding transcription factor activity
BGK55_RS18655	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BGK55_RS18695	COG0024	Methionine aminopeptidase
BGK55_RS18720	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BGK55_RS18725	COG1490	D-aminoacyl-tRNA deacylase activity
BGK55_RS18730	COG1560	Kdo2-lipid A biosynthetic process
BGK55_RS18785	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BGK55_RS18785	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BGK55_RS18790	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BGK55_RS18795	COG0242	peptide deformylase activity
BGK55_RS18800	COG1652	LysM domain
BGK55_RS18805	COG0758	DNA mediated transformation
BGK55_RS18825	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BGK55_RS18825	COG1754	DNA topoisomerase type I activity
BGK55_RS18830	COG0009	L-threonylcarbamoyladenylate synthase
BGK55_RS18845	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS18860	COG0616	signal peptide processing
BGK55_RS18865	COG0534	Mate efflux family protein
BGK55_RS18885	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BGK55_RS18890	COG0625	glutathione transferase activity
BGK55_RS18905	COG1252	NADH dehydrogenase
BGK55_RS18910	COG2860	membrane
BGK55_RS18915	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BGK55_RS18920	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BGK55_RS18925	COG3437	response regulator, receiver
BGK55_RS18930	COG2177	Part of the ABC transporter FtsEX involved in
BGK55_RS18935	COG2884	Cell division ATP-binding protein ftsE
BGK55_RS18945	COG3118	belongs to the thioredoxin family
BGK55_RS18950	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BGK55_RS18955	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
BGK55_RS18960	COG0583	DNA-binding transcription factor activity
BGK55_RS18980	COG1652	LysM domain
BGK55_RS18985	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BGK55_RS18985	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BGK55_RS18990	COG1473	amidohydrolase
BGK55_RS18995	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BGK55_RS19000	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BGK55_RS19010	COG5383	Protein conserved in bacteria
BGK55_RS19050	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
BGK55_RS19055	COG3023	N-Acetylmuramoyl-L-alanine amidase
BGK55_RS19065	COG4948	Mandelate Racemase Muconate Lactonizing
BGK55_RS19075	COG0531	amino acid
BGK55_RS19090	COG4682	membrane
BGK55_RS19095	COG2133	pyrroloquinoline quinone binding
BGK55_RS19105	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BGK55_RS19110	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BGK55_RS19120	COG1610	YqeY-like protein
BGK55_RS19125	COG1295	ribonuclease BN
BGK55_RS19130	COG0358	DNA primase activity
BGK55_RS19145	COG0109	protoheme IX farnesyltransferase activity
BGK55_RS19175	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
BGK55_RS19185	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BGK55_RS19230	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BGK55_RS19235	COG0739	heme binding
BGK55_RS19240	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
BGK55_RS19250	COG2211	Major facilitator Superfamily
BGK55_RS19255	COG0708	Exodeoxyribonuclease III
BGK55_RS19260	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BGK55_RS19270	COG1192	Involved in chromosome partitioning
BGK55_RS19275	COG1475	DNA binding
BGK55_RS19290	COG0463	Glycosyl transferase, family 2
BGK55_RS19310	COG0756	dUTP diphosphatase activity
BGK55_RS19315	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BGK55_RS19320	COG2003	Belongs to the UPF0758 family
BGK55_RS19325	COG0018	arginyl-trna synthetase
BGK55_RS19340	COG4221	oxidoreductase activity
BGK55_RS19345	COG2755	lipolytic protein G-D-S-L family
BGK55_RS19345	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
BGK55_RS19365	COG1166	arginine decarboxylase activity
BGK55_RS19370	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BGK55_RS19405	COG0606	chelatase, subunit chli
BGK55_RS19420	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BGK55_RS19455	COG1690	Belongs to the RtcB family
BGK55_RS19495	COG1090	epimerase
BGK55_RS19505	COG0642	Histidine kinase
BGK55_RS19530	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BGK55_RS19555	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BGK55_RS19560	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BGK55_RS19575	COG0753	catalase activity
BGK55_RS19590	COG2197	response regulator
BGK55_RS19595	COG4585	Histidine kinase
BGK55_RS19600	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BGK55_RS19605	COG1136	(ABC) transporter
BGK55_RS19645	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BGK55_RS19650	COG0180	Tryptophanyl-tRNA synthetase
BGK55_RS19655	COG3237	CsbD-like
BGK55_RS19695	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BGK55_RS19750	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
BGK55_RS19755	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
BGK55_RS19755	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
BGK55_RS19810	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BGK55_RS19830	COG1199	ATP-dependent helicase activity
BGK55_RS19845	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BGK55_RS19910	COG0625	glutathione transferase activity
BGK55_RS19950	COG4555	ABC transporter
BGK55_RS19960	COG1476	TRANSCRIPTIONal
BGK55_RS20005	COG0633	Ferredoxin
BGK55_RS20005	COG0543	2 iron, 2 sulfur cluster binding
BGK55_RS20010	COG1131	(ABC) transporter
BGK55_RS20015	COG0842	Transport permease protein
BGK55_RS20025	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BGK55_RS20055	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BGK55_RS20060	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BGK55_RS20070	COG0045	succinate-CoA ligase (ADP-forming) activity
BGK55_RS20070	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BGK55_RS20070	COG1042	CoA-binding domain protein
BGK55_RS20075	COG2239	Acts as a magnesium transporter
BGK55_RS20090	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BGK55_RS20095	COG3387	PFAM Glycoside hydrolase 15-related
BGK55_RS20110	COG3100	YcgL domain-containing protein
BGK55_RS20115	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BGK55_RS20125	COG0463	Glycosyl transferase, family 2
BGK55_RS20140	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS20185	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BGK55_RS20200	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BGK55_RS20225	COG0823	Involved in the tonB-independent uptake of proteins
BGK55_RS20225	COG1506	peptidase
BGK55_RS20225	COG4946	Tricorn protease homolog
BGK55_RS20240	COG0408	coproporphyrinogen oxidase activity
BGK55_RS20280	COG2815	serine threonine protein kinase
BGK55_RS20280	COG0515	serine threonine protein kinase
BGK55_RS20285	COG0631	protein serine/threonine phosphatase activity
BGK55_RS20450	COG0210	DNA helicase
BGK55_RS20465	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BGK55_RS20475	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BGK55_RS20485	COG2159	amidohydrolase
BGK55_RS20510	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BGK55_RS20530	COG0357	Ribosomal RNA small subunit methyltransferase G
BGK55_RS20535	COG3540	Alkaline phosphatase
BGK55_RS20545	COG2091	lysine biosynthetic process via aminoadipic acid
BGK55_RS20565	COG0708	Exodeoxyribonuclease III
BGK55_RS20570	COG1846	Transcriptional regulator
BGK55_RS20570	COG1940	carbohydrate kinase activity
BGK55_RS20580	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BGK55_RS20590	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BGK55_RS20595	COG3162	membrane
BGK55_RS20605	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BGK55_RS20635	COG3507	Belongs to the glycosyl hydrolase 43 family
BGK55_RS20655	COG1028	Short-chain dehydrogenase reductase Sdr
BGK55_RS20660	COG0179	Fumarylacetoacetate (FAA) hydrolase
BGK55_RS20665	COG4948	Mandelate Racemase Muconate Lactonizing
BGK55_RS20670	COG3254	rhamnose metabolic process
BGK55_RS20675	COG0738	Major facilitator superfamily
BGK55_RS20680	COG1414	Transcriptional regulator
BGK55_RS20690	COG1971	Probably functions as a manganese efflux pump
BGK55_RS20695	COG2205	protein histidine kinase activity
BGK55_RS20705	COG3459	Glycosyltransferase 36 associated
BGK55_RS20710	COG2211	Major facilitator Superfamily
BGK55_RS20715	COG3265	gluconokinase activity
BGK55_RS20720	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BGK55_RS20750	COG2911	Protein conserved in bacteria
BGK55_RS20755	COG0729	surface antigen
BGK55_RS20760	COG4771	TonB-dependent receptor
BGK55_RS20765	COG0457	Tetratricopeptide repeat
BGK55_RS20775	COG0752	glycyl-tRNA synthetase alpha subunit
BGK55_RS20780	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BGK55_RS20790	COG0519	Catalyzes the synthesis of GMP from XMP
BGK55_RS20790	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BGK55_RS20800	COG0805	protein transport
BGK55_RS20805	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BGK55_RS20810	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BGK55_RS20820	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
BGK55_RS20840	COG2974	May be involved in recombination
BGK55_RS20845	COG0037	tRNA processing
BGK55_RS20850	COG2115	Belongs to the xylose isomerase family
BGK55_RS20860	COG3661	Belongs to the glycosyl hydrolase 67 family
BGK55_RS20870	COG4948	Mandelate Racemase Muconate Lactonizing
BGK55_RS20880	COG1472	Belongs to the glycosyl hydrolase 3 family
BGK55_RS20885	COG0246	Mannitol dehydrogenase
BGK55_RS20925	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
BGK55_RS20950	COG3386	PFAM SMP-30 Gluconolaconase
BGK55_RS20960	COG3250	beta-galactosidase activity
BGK55_RS20965	COG1904	glucuronate isomerase
BGK55_RS20980	COG3693	PFAM glycoside hydrolase, family 10
BGK55_RS20995	COG2211	Major facilitator Superfamily
BGK55_RS21030	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
BGK55_RS21040	COG1435	thymidine kinase activity
BGK55_RS21045	COG0210	DNA helicase
BGK55_RS21060	COG3132	Protein of unknown function, DUF480
BGK55_RS21065	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
BGK55_RS21070	COG0284	orotidine-5'-phosphate decarboxylase activity
BGK55_RS21105	COG2937	Belongs to the GPAT DAPAT family
BGK55_RS21125	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BGK55_RS21155	COG3135	benzoate transporter
BGK55_RS21175	COG0676	glucose-6-phosphate 1-epimerase activity
BGK55_RS21185	COG3012	SEC-C Motif Domain Protein
BGK55_RS21190	COG0730	response to heat
BGK55_RS21210	COG0302	gtp cyclohydrolase
BGK55_RS21225	COG1566	PFAM secretion protein HlyD family protein
BGK55_RS21235	COG1289	transmembrane transporter activity
BGK55_RS21240	COG0477	Major facilitator Superfamily
BGK55_RS21245	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BGK55_RS21265	COG4691	Plasmid stability protein
BGK55_RS21270	COG1487	ribonuclease activity
BGK55_RS21310	COG1074	ATP-dependent DNA helicase activity
BGK55_RS21315	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
BGK55_RS21330	COG1127	ABC transporter
BGK55_RS21335	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BGK55_RS21340	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BGK55_RS21355	COG2853	Lipoprotein
BGK55_RS21365	COG0386	Belongs to the glutathione peroxidase family
BGK55_RS21375	COG1322	Protein conserved in bacteria
BGK55_RS21380	COG0604	alcohol dehydrogenase
BGK55_RS21385	COG0583	DNA-binding transcription factor activity
BGK55_RS21395	COG0625	glutathione transferase activity
BGK55_RS21405	COG0531	amino acid
BGK55_RS21420	COG3706	GGDEF domain
BGK55_RS21440	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BGK55_RS21445	COG0861	Integral membrane protein TerC family
BGK55_RS21455	COG0584	glycerophosphoryl diester phosphodiesterase
BGK55_RS21470	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BGK55_RS21475	COG0726	polysaccharide deacetylase
BGK55_RS21485	COG0706	membrane insertase activity
BGK55_RS21490	COG0594	ribonuclease P activity
BGK55_RS21520	COG3012	SEC-C Motif Domain Protein
BGK55_RS21520	COG3318	Belongs to the UPF0149 family
BGK55_RS21540	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BGK55_RS21555	COG1192	Involved in chromosome partitioning
BGK55_RS21600	COG2801	Transposase and inactivated derivatives
BGK55_RS21635	COG3012	SEC-C Motif Domain Protein
BGK55_RS21635	COG3318	Belongs to the UPF0149 family
BGK55_RS21655	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BGK55_RS21720	COG4456	Virulence-associated protein
BGK55_RS21780	COG2951	lytic endotransglycosylase activity
BGK55_RS21790	COG3012	SEC-C Motif Domain Protein
BGK55_RS21790	COG3318	Belongs to the UPF0149 family
BGK55_RS21905	COG1192	Involved in chromosome partitioning
BGK55_RS21945	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BGK55_RS22040	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BGK55_RS22190	COG2852	Protein conserved in bacteria
BGK55_RS22240	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BGK55_RS22260	COG4221	oxidoreductase activity
BGK55_RS22370	COG1012	belongs to the aldehyde dehydrogenase family
BGK55_RS22385	COG1404	Belongs to the peptidase S8 family
BGK55_RS22765	COG0583	DNA-binding transcription factor activity
BGK55_RS22955	COG0840	transmembrane signaling receptor activity
BGK55_RS23095	COG2369	cell adhesion
BGK55_RS23135	COG1960	acyl-CoA dehydrogenase activity
BGK55_RS23140	COG1960	acyl-CoA dehydrogenase activity
BGK55_RS23280	COG2201	protein-glutamate methylesterase activity
BGK55_RS23330	COG2944	sequence-specific DNA binding
BGK55_RS23520	COG2972	Histidine kinase