APY29_RS00010    2774 ..    2791 + -14.1  -5.28942   ACGTGGAACACGGAA             GCCCGGC GGAT GCCGGGC              TTTTTGTTTGCGCTG 100 52
APY29_RS23380 NONE
APY29_RS00015    4962 ..    4997 +  -6.9  -3.28712   GCTATCCCCTTTTCC   CACGGCGCGGA-GCGGT CATC GCTGCCTTCGC-CCGTG    TTGTGGAGCCAACGG  55 81
        gyrB    7447 ..    7457 +  -5.4  -2.91264   AACGCGCTGAAGGTG                 TCCA ACC TGGA                 TATCTGAGTCACCAG  46 8
APY29_RS00025 NONE
APY29_RS00030 NONE
APY29_RS00035 NONE
APY29_RS00040 NONE
APY29_RS23415   11646 ..   11679 +    -6  -2.53396   ACTTTGCTCTGAACT    GATCCCACGGGCCGGC CACG GTCGGCCCA-GG-ATC     CTGTCTTCCTTTCGC  45 22
APY29_RS23420 NONE
APY29_RS00045 NONE
APY29_RS00050 NONE
APY29_RS00055 NONE
APY29_RS23430 NONE
APY29_RS23435   16080 ..   16099 +  -4.2  -3.28924   ACAACACCCAGCTCA            GCGTG-GCC ACC GGTTCGCGC            TTCTGCAGCACGATC  48 47
APY29_RS00075   17892 ..   17914 + -13.4  -3.61715   GGTGACAAAGAAAAA           CGCCCCAGCT TTG AACTGGGGCG           TTCTTAGAAAAGCTC  81 362
APY29_RS23450   20091 ..   20103 +  -6.2   -3.5393   GCGATCCACATGCGC                CGCG TGCTC CGCG                TTTCCAAGGACTGCT  56 287
APY29_RS23460 NONE
APY29_RS23465   21646 ..   21663 +  -6.9  -3.61178   GTGCAGGAATCGGCA             GGCGCGA GGCA TCGCGGC              TTTCCACTGCCTGCA  59 12
APY29_RS23470   24647 ..   24664 +  -5.6  -2.74605   GGCAGTCTGAAGACG             TGTGCT GCCCCG AGCACA              TCGCTTTTGAAGGCC  46 33
APY29_RS23475   25395 ..   25453 +  -8.7  -2.52623   TTTGCAGTCTAGCTT CGGCAGACCGCACAGGTGAAGGGGTGGGC TAT GCCCACCCCCTTGCC-GCCAGG-CTGACG CTCTTCTGGCCGCCG  53 64
APY29_RS23480   25816 ..   25866 +  -3.3  -3.37017   GCGTTGAAGGCGTTG CTCCAGGATGGTCGCGGCA-GCG AGCAAGA TGCCTTCCTCGTCCATC-TGGAG TTGGTATTGGGCCTT  48 258
APY29_RS23490 NONE
APY29_RS23495 NONE
APY29_RS23500 NONE
APY29_RS00115 NONE
APY29_RS23505   29182 ..   29195 +  -5.2  -4.08064   AGCCATCTTCAGGTG               CGGG TTCTAC CCCG                TTTTCACGGACACTT  63 91
APY29_RS00130   30029 ..   30051 +   -12  -2.84919   CAGGCGTGATGCCGC           CGAGCGCC ATATTCG GGCGCTCG           TGGTTGTACGTCCAT  67 4
APY29_RS00140 NONE
APY29_RS23515 NONE
APY29_RS23520 NONE
APY29_RS00145   32483 ..   32494 +  -2.2  -2.81133   AACAACTACTAAGAA                CGACC TAC GG-CG                TATACTGAATGAGTG  39 6
APY29_RS00150 NONE
APY29_RS00165 NONE
APY29_RS23530 NONE
APY29_RS00170 NONE
APY29_RS23535 NONE
APY29_RS23540 NONE
APY29_RS00175 NONE
APY29_RS23545   37965 ..   37993 +  -5.2  -3.02461   CCTGTGTGCCGACCG       GACCTACGTCACG ACGC CGCG-CGCAGGTC        TGTTGCCCACGCTTA  47 31
APY29_RS23550   38770 ..   38795 +  -4.5  -3.14564   CGTCGGCCACCTGCA         CCGCCGAGGTC AGCA GACCGCCGGGG          TTGCTGCGCAGATCC  47 13
APY29_RS23555   39155 ..   39167 +  -5.5  -3.45023   GTCGATCGGCGCGAT                CACCT TGA GGGTG                TTGTCCTGCTGCTGC  55 176
APY29_RS00190 NONE
APY29_RS23565 NONE
APY29_RS00195   43751 ..   43782 + -23.2  -3.34534   GAGAATCTTCTGTTA      CGCAAAAGGCCTCC CATC GGAGGCCTTTTGCG       TTGCTGTGTCATGTC 100 113
APY29_RS00210   46462 ..   46474 +  -4.7  -3.16921   TCCACCTGACGACTG                CTCGC TAG GCGTG                TTGGTCGCGCTTAAT  48 5
APY29_RS23585   47782 ..   47804 +  -9.9  -2.64616   CGCTTCGAACAGTGG          CGCGCATCGC CTGC GCGATG-GCG           TGCTGTACATCGCGG  57 170
APY29_RS00235   50763 ..   50806 + -11.8  -3.14132   GCGGTTGGATCAACT CTCGTGTCACCGCTTGC-TTC GTA GAACGTATGCGGTGACATGCG TTGGTGCAGCCAGCG  70 44
APY29_RS23615 NONE
APY29_RS23620   55989 ..   56000 +  -7.2  -3.15544   CCGGAATTGCTGCGC                CCGC CCAG GCGG                 TTCATCGCGATCGCC  56 282
APY29_RS23640 NONE
APY29_RS23645 NONE
APY29_RS23650   59104 ..   59132 +  -6.5  -3.61715   ATCGGCGGCGCTTCC        GGCGCTGCATCCG GTG CGGGCGCAGAGGC        TTGTTCGGCCGCGTG  59 5
APY29_RS00255   60720 ..   60731 +  -5.8  -3.36878   ACGCCCGCCGGCGAT                CGCT CGAT AGCG                 TTGTCAGTCAATGCA  53 147
APY29_RS23670 NONE
APY29_RS23675 NONE
APY29_RS23680 NONE
APY29_RS00265   62640 ..   62653 +  -2.3  -3.57462   CGCGCTTGCTGCACC               GCATG CAAT CACGC                TTTCGCGGTCGCCTC  49 98
APY29_RS00275   64595 ..   64608 +  -4.5  -2.71144   CGTGGCCGCGATACA               TTGCG GGGC CGCGA                TCGTTCGGCCCGGTC  43 126
APY29_RS23695   64804 ..   64855 +  -4.2  -2.50816   CACAGACGGCAGGTT GACCGGCTCGC-CGTTGTGCAATGC AGC GGATTGCTCCACGCGCGGCCCTGAC GTTGGTCGCTGCGCC  41 1
APY29_RS23700 NONE
APY29_RS00285 NONE
APY29_RS00290 NONE
APY29_RS00295 NONE
APY29_RS00300   70401 ..   70414 +  -3.7  -3.51924   CGGTTTCCGACAACA               CCGCC AGCA GGCCG                TTGTGTGCATGCAGC  51 365
APY29_RS23715 NONE
APY29_RS23720 NONE
APY29_RS23725 NONE
APY29_RS23730   77330 ..   77342 +  -4.7  -3.21099   CAACCTGCAACAACT                GCAGC CGG GCGGC                TTGGTCGTGCCACAG  48 130
APY29_RS23735   78279 ..   78301 +  -4.8  -3.09516   GACGCCCAGCCGGTC           GCGGCAAT AGATCAG ATCGCCGC           TTGCCTGCTCCAGCA  47 505
APY29_RS23765 NONE
APY29_RS23780 NONE
APY29_RS23360   88693 ..   88716 +    -8  -3.54424   CATGATCAGTTTGTC          GGCCAGGGCG CGCT CGTCCAGGTC           TTTCGGCACCTGCGG  62 113
APY29_RS00385 NONE
APY29_RS00390 NONE
APY29_RS00395 NONE
APY29_RS00400   92836 ..   92878 +  -6.2  -2.78463   CCGATCACGTGGTCG CCCTCGGTGACGACCAGG AACAGCA CCTGCTCCTGACCGAGGA TGTAATGACGCCGCT  47 324
APY29_RS00425   96590 ..   96602 +  -4.8  -2.54896   CAAGACGCAGAGCGT                TGGC CACGC GCCA                TGAGTTGGCTGGCAG  43 248
APY29_RS00430 NONE
APY29_RS00435   99405 ..   99425 + -12.5  -2.54896   TTGACGCCAGGCACG            TGCCTGCGC AAT GCGCTGGCA            TCGCTTCGGTAAAGG  67 508
APY29_RS00450 NONE
APY29_RS00455  102223 ..  102250 +  -3.2  -3.70902   AGTTGCATCAGCGCT        TGGCGCGCCGCT TCCA GGCGCTGCGCGG         TTTGCGTGTCGACCG  53 397
APY29_RS00470  106682 ..  106695 +  -2.4  -2.52623   GCGCGGCCATGCTGC               CGTT CAAGGA AACG                CTGTTCTAGCGCGCG  37 3
APY29_RS00475 NONE
APY29_RS00480  109271 ..  109311 + -21.4  -2.75528   ACGTGGACCTGCATC CGCACTTGCCTCCCATCGA TTCA TCGGTGG-AGGCAAGTGCG  TGATCTCTTCGGAGT 100 240
APY29_RS00495  114350 ..  114392 +  -4.8  -3.84825   GGGTAACCACGCGGT GTGGCGTCCTCGGGCC-GGC CGCTT GCCTGGCCCGAAG-TGATAC TTTAATGTCACTGCA  60 35
APY29_RS00500 NONE
APY29_RS00505  115001 ..  115032 +  -7.2  -2.61264   CAGGCGCGGCCGGTG      CTCGGTG-CGGCATG CAC CACGCCGACACTGCG      GTTGTGAGTGCGCCG  51 75
APY29_RS00510  115332 ..  115362 +    -9  -3.01791   CACGTCGGCGTCTTC      GG-GCACCAGGCG CGCAAA CGCCTGCTGCACC       TGTTCGCCAAAACCT  57 269
APY29_RS00525  117943 ..  117955 +  -6.2  -3.04144   GCAGAGCATGCCCAC                CCGC CGGTA GCGG                TCTTGACCCTGCCAG  49 105
APY29_RS00530  118366 ..  118395 +  -9.3  -3.36878   ATGGCAGGCGTGATG       CCGCCGAGCGCC ATATTCG GGCGCTCG-TGG       TTGTACGTCCATAGC  63 102
APY29_RS00555  129375 ..  129415 +   -14  -3.68073   TGGCGCGCGATTGCG CGCC-AGCGGGCAGCTGGC AGCT GGCAGATGCCCGCTAGGTG  TTGTTCGCTGCGCTG  84 129
APY29_RS00570 NONE
APY29_RS00575  135484 ..  135496 +  -3.4  -3.87627   AACACTCATCGAAGG                CCAA TGCAC TTGG                TGTTTTGTCTGCGGA  56 389
APY29_RS00605  140480 ..  140490 +  -2.4  -3.12402   GGCTCCCCTGCCGCT                 GCCG TCC CGTC                 TTCGATGATCATTTC  43 7
        lldD  141818 ..  141841 +  -8.8  -3.77553   CCCGCCTTGCGCCTG          GGC-GCGGCCG TCT TGGCCGCAGTC          TTCTTGGTCGTCTTG  69 182
APY29_RS00625  143484 ..  143503 +  -3.4  -3.98745   CACGGGAACCGATGA            CTGACTGG CGTT CCTGACAG             TTATTTGGCTCGTTC  58 22
APY29_RS00635  144447 ..  144461 +  -4.2  -2.81464   CGTAGCAAGAGCGAC               GCCG ATATAGC CGGC               TGTCGTCGCTGCTGC  42 36
APY29_RS00640 NONE
APY29_RS00645 NONE
APY29_RS00650 NONE
APY29_RS00655  147137 ..  147150 +  -3.7  -3.64822   GCTTGATCGCGGCCA               CGCGC GCGA GCGCC                TTTCCATGAAGGCGT  54 324
APY29_RS00680  152968 ..  152990 + -11.3  -5.31059   GCTGAAGTGACCAAG          CCGGGAGCGC GCAA GC-CTCCCGG           TTTTTTGCTTGCTGT 100 68
APY29_RS00685  154242 ..  154272 + -21.3  -3.85817   GCAAACTGGATCCCA       CCAAGACACCCGC CCCGT GCGGGTGTCTTGG       TTTATGACCCCCGCT 100 67
APY29_RS00690  155017 ..  155056 +  -8.5  -3.62046   GCTGCGTCGTCGCGG  GCGACCGCCATGCACGCG AGTCC CGCTTGC-TCGCGTTCGC  TTATTGCAGGGCTAG  65 204
APY29_RS00695  156839 ..  156861 +  -3.4   -3.9712   GGGTGATTGTCGGTG           GATCAGTTGC GCT GCGATTGATG           TTTCTAGTCACATCA  58 35
APY29_RS00700 NONE
APY29_RS00705 NONE
APY29_RS00710 NONE
APY29_RS00715 NONE
APY29_RS00720 NONE
APY29_RS00725 NONE
APY29_RS00730  166647 ..  166665 +    -3  -2.99471   CTTCTTCCGGTGCAG             CGGTCGTT CGG ACCGACGG             TGTCTGTAGACCTGG  43 58
APY29_RS00735  168941 ..  168973 +  -5.3  -3.28416   ATACCCGAGGCAGGG      TCGCGCTCGCGCAGC ATG GCATCGAAGGCGCGA      TTGCTGTCGCTGGTG  51 413
APY29_RS00750  171290 ..  171325 + -10.5  -3.26449   CCCCGCCTTCAAGTT   GACAGCGATGCGCAGCG CCAT CGCCG-GCATCGC-GTC    TTGCGTTATGTCACC  66 247
APY29_RS00760  173531 ..  173550 + -10.6  -4.28656   AATTTGACGCGAAAG            GAGCGGCC TAGC GGCCGCCC             TTTTCCATCTTCGAT  89 284
APY29_RS00790 NONE
APY29_RS00795  181434 ..  181472 +  -4.6  -4.05446   TCTTGACGCCCTCGA  TCACC-ACGACGCATTG GTGCGG CAATGCGCTGTCGGTGC   TTTATCGTTCCGAGA  63 441
APY29_RS00810 NONE
        treS NONE
APY29_RS00820  192898 ..  192911 +  -3.8  -3.53444   TGATGGCATTGATCT               CTCC AGGCCG GGAG                TTTCGCAACAGATCA  51 170
APY29_RS00825 NONE
APY29_RS00835  196858 ..  196874 +  -2.9   -5.0133   TTACTGACAGCGAGT              TAGCCCA CTT TTGGCTG              TTTTTTACACAAATC  78 92
APY29_RS00840  197415 ..  197465 +  -9.7  -4.13945   TGCCAGGTCGGCCTC CAGGGGCGTACCAGGATCCGGGAGG CCG CC-CCCG-ATCCTGGTACGCGGGCG TTTTACACTCCAGCT  75 269
APY29_RS00850  201029 ..  201040 +  -5.8  -4.00042   GCCAACCCTCTTCTT                GTGC CGGC GCAC                 TTGTTTGGTGGGGAA  65 29
APY29_RS00860  201944 ..  201959 +  -8.2  -4.19879   CCAGCATCGAACGAT              GGGCGC TTGC GCGCTC               TTTTCCGCCTTTTGT  76 103
APY29_RS00870  202980 ..  202991 +  -5.8  -3.61404   AGGATTACATCTATC                GCAC GCTT GTGC                 TTCTATAATTCATGA  57 148
APY29_RS00875 NONE
APY29_RS00880 NONE
APY29_RS00885  204063 ..  204079 +  -3.6  -3.53779   CGTTTTTGGGGATGC              CGACGC TATGC GCCTCG              TTGATGTTTTGAAAG  51 5
APY29_RS00890 NONE
APY29_RS00895 NONE
APY29_RS00900 NONE
APY29_RS00905 NONE
APY29_RS00910 NONE
APY29_RS00915 NONE
       virB9 NONE
APY29_RS00925 NONE
      virB11 NONE
APY29_RS00935 NONE
APY29_RS00940  214088 ..  214099 +  -2.2  -3.50393   TGCTTTATGGCCCAG                GC-GG TGA CCAGC                TTCTCTCGCATGCGA  47 50
APY29_RS00945  214598 ..  214614 +  -3.7  -3.12351   ACCAGCCGGAACCAC              CGAAAGT CCC GCTTTTG              TTGCATGTAACAAAA  47 97
APY29_RS00950 NONE
APY29_RS00955  215288 ..  215305 +  -6.9  -4.16842   CCAGCCCTAGCCAAA             GCGTCCG TACT CGGACGG              TTTCTTGCCGCTCGC  69 103
APY29_RS00975 NONE
APY29_RS00980 NONE
APY29_RS00985  222758 ..  222777 +  -2.8   -3.6849   GCAAATCCGCCATCA            GGTCGTCCA CAT TGG-CGAAC            TTCTTACCCTTGCCT  53 460
APY29_RS01035  232562 ..  232575 +  -5.2  -3.14881   GCCGCTCACGCACCA               GCCG CTTCTT CGGC                TTGATCCGCAGGTTC  49 409
APY29_RS01045  233309 ..  233322 +  -9.5  -3.18264   TCTGCCACCGATACA               CGCGC CACT GCGCG                TTGCTGCCTGAGGAG  61 1
APY29_RS01050 NONE
APY29_RS01055  234215 ..  234238 + -18.2  -2.62184   CCAATCACTGAAAGA          CACTGCCGCC CGAA GGCGGCAGTG           TCGTGTGCAGACAGG  86 239
APY29_RS01075 NONE
APY29_RS01080  241546 ..  241558 +  -4.8  -3.28924   AGGCACCGGCACGGT                GCTC AGCAC GAGC                TTCTCCAGGACGATG  49 165
APY29_RS01095  248766 ..  248788 +  -4.1  -3.02461   CATGCCGTTTCGGCG           TGTCGGAGG CTGCA TCTTCGGCA           TCTTCCGGCCCGTTG  44 475
        fucP NONE
APY29_RS01120  252085 ..  252134 + -15.8  -2.62263   CGCAGCGCTAGGCCG CGCCCT-CATCCGCCCTGCGGG CACCTTCT CCCGCAGG-CGGGAGAAGGGCG TGATCTGGCGCAGGT  77 30
APY29_RS01130  254667 ..  254704 +  -6.1  -3.14564   CCTTGACCCACTGGC   CGCCATGTTCGAGCTGG AATT CGCGCTCGGACAGGTCG    TTGATCACGGCGTAG  51 389
APY29_RS01160  260123 ..  260143 +  -2.5  -3.53444   CTGGCCCAGGTCGCC            GCCGAAT TCCGGAC ACTCGGC            TTTGCAGGCCCATGC  48 274
APY29_RS01175  261265 ..  261320 +  -6.6  -2.69151   CAGACGCAGCGCGAT TGCCGCACGCGTCGCGCGACGCGCTGT CCA ACATCCAGCCGTGCC-CGCGCGTGGCA TGCTGTATGGCCAGG  49 177
APY29_RS01180  262729 ..  262746 +  -7.7  -4.16016   GGCTTCGGACACGCC             CAGGTCG TAGG CGATCTG              TTTGTTGAGGCGTCC  69 473
APY29_RS01195  267165 ..  267203 +  -5.9  -3.68024   TAGCGTTCTGCCACT  GGCGGC-CTGCTCCACTGC GGT GGAGCGG-GCATCGCCGCC  TTATGTCTTACCAGC  60 38
APY29_RS01200  267538 ..  267577 +  -2.2  -2.82623   GACCGCGCAGATCCT  GGAGGAAGCCCGCAAAT GAGCAAG ATTT-CGCGCCTTCTCC  TGATTCTGGCCGGCC  39 7
        actP  269313 ..  269331 + -13.1  -4.35524   TGGTGTGATCGCAGA             CGCCGGC CCAGT GCCGGCG             TTTTGCGTTTGGGCG  95 58
APY29_RS01210  270934 ..  270959 + -17.6  -3.88232   GCCCACGGGCCGAAC         CCGACGGCGG CGCTGA CCGCCGTCGG          TTCTTGTCTAACGGA 100 57
APY29_RS01215  271925 ..  271947 +  -3.3  -2.50113   GGGCAGGCGATCGAT          CG-ACCTGGC CATG GCCGGGCACG           GTTGCTGCGATCGTG  39 82
APY29_RS01220  273081 ..  273097 +  -2.2  -3.01791   GCAGGCTGCGCACAT              CGGC AAACGCCAG GCCG              TCTTCGGCCAGCAGT  41 364
         xth NONE
APY29_RS01235  275527 ..  275546 + -16.4  -3.09516   AGGCTGAGACGACAA            CGCCCGGG CAGG CCCGGGCG             TTGCGTGATGCGACA  84 34
APY29_RS01245  276716 ..  276728 +  -6.2  -4.56597   GCGGCGAGGCGTTGG                GCGC AGGTG GCGC                TTTTTGAAACACCAC  76 189
APY29_RS01260  281099 ..  281129 +  -6.1  -3.54424   GCGCGGCCGGCGGCT      GCCATGATCGGGCG TTCG CTCCAGATCA-GGC       TTTCCGCACGTGACC  57 317
APY29_RS01265  283260 ..  283271 +  -7.2  -3.23692   TTGCCTCCCTTGCTG                CGCC TGAT GGCG                 TTGCTGGTGCTGGTC  56 329
APY29_RS01270 NONE
APY29_RS01275  284948 ..  284976 +  -2.2   -3.1247   CGCGGTTTCCGTATT        GCGTTGTCGTGC CGTGT GCACGTGGCCGC        TTGAATCTGCCGCAT  43 42
APY29_RS01280  286707 ..  286719 +  -4.7  -3.58726   CGCGCATCCATGCGC                GCCGC CCT GCGGG                TTGTATCTGCCAGCC  55 342
APY29_RS01290  290236 ..  290250 +  -2.7  -2.72991   GAGTAGCGGGCGTCA               CGCGG ATGCA CGGCG               TGGTTGGCCGTGTAC  39 35
APY29_RS01295 NONE
        rpmG  291022 ..  291053 + -18.8  -3.92522   CTGGATCCGCTTTCA      AGCAAACACCCGCC GCAA GGCGGGTGTTTGCG       TTTGTGGGGTTGGGG 100 52
APY29_RS01325 NONE
         cls  297107 ..  297138 +  -8.6  -2.57132   CGATGCGTTGATGTA      GGGCG-TGCGCGGTC CAT GCGCGCGCAGTGCCC      GTTGTGGCGCAGCGC  53 25
APY29_RS01335 NONE
APY29_RS01340  298917 ..  298945 +  -5.1  -3.16191   CACTCCAACCCCTCT        GCCGATGGGAGAG GGG CTTACCCAACCGC        TTCATCGCAATCTCA  48 187
APY29_RS01345  301481 ..  301494 +  -2.3  -3.83205   CCTGTGTAGATCAGG               CGGAG GATT CTGCG                TTTGGTATCGAAGGT  54 325
APY29_RS01355  302805 ..  302817 +  -3.3  -2.65815   GATCCATCTCAAGGT                CTGCG TTG CGGAG                TGCTGTCAATCTCAA  39 214
APY29_RS01360  303456 ..  303488 +  -6.2  -3.12351   CGGTTGTGCCGCAAA     GTGCGGTGCCGG-TC GGGC GAGCCGGCGCAGTGC      TTCGGTATGCACCAG  51 164
APY29_RS01370 NONE
APY29_RS01375  306419 ..  306434 +  -3.2  -3.05844   GATCCGACGCATCTG              CGTCAT GGCG AGGACG               TCTTCGCGTCGCGCC  43 39
APY29_RS01380  307142 ..  307165 +  -8.8  -3.67597   CATGCAATAACTGGC          GGT-GCCGCGC ATG GCGCCGCCACC          TTCTTCGATAAGGAA  65 178
APY29_RS01385  307965 ..  307981 +  -4.3  -2.78679   GATGTGCGCGATGTG              CGGTTCG ACG CGGGCTG              ATTTCAATGGCCGAA  42 8
APY29_RS01390 NONE
        vasA NONE
APY29_RS01400  311380 ..  311397 +  -6.3  -2.75064   GCTGCACCCCTCCGG             GTGACGCG CAG CGCGT-AC             TGATTCGCTCACCAC  49 22
        clpV  314454 ..  314483 +  -9.3  -3.36878   ATGGCAGGCGTGATG       CCGCCGAGCGCC ATATTCG GGCGCTCG-TGG       TTGTACGTCCATAGC  63 260
APY29_RS01425  319837 ..  319863 + -12.9  -3.04263   ATTCGCATCCAGGCA         CCCGCCACGTC ATTGC GGCGCGGCGGG         TGTTGGGCCTGCGCT  71 40
APY29_RS01430  321191 ..  321202 +  -7.2  -3.05463   TCCCGGATCGTCCAG                CGCC GCCA GGCG                 TTCCATCGCCGCAAT  54 252
APY29_RS01455  327614 ..  327657 +  -7.4  -2.59431   CCGCGGCGTGCCGAC CCACGGCAGGCACATGCCG AGCAATG CGGTG-GTGCCTGCAGTGC TGACTTCTGCACGCA  51 130
APY29_RS01470 NONE
APY29_RS01475 NONE
APY29_RS01480  333041 ..  333082 + -11.5  -3.14931   GGTGATCACCTTGGG CTGCTTCACCGTGCTGATC GGGT GAGCGGTGCGGTGGGGCGG  TTGGTGACCGGTGGC  67 1
APY29_RS01485  334633 ..  334646 +  -2.3  -3.53012   CCTGGGCCGGCCTGA               GACGA AATG TCGGC                TTTGCCGCACGCACG  47 26
APY29_RS01490 NONE
APY29_RS01495  337330 ..  337347 +  -5.5  -3.65529   GGGCGGGGTCGATTG             CGCCGAT GGCC GTTGGCG              TTTGGCTGGGCGTGT  57 60
APY29_RS01500  339052 ..  339063 +  -2.2  -3.02511   CGATCCGGTGCCTGA                CGTC GGGC GATG                 TGTTGAGCGAATCGG  41 179
APY29_RS01505 NONE
APY29_RS01510 NONE
APY29_RS01515 NONE
APY29_RS01520 NONE
APY29_RS01525 NONE
APY29_RS01530 NONE
APY29_RS01535 NONE
APY29_RS01540 NONE
APY29_RS01545 NONE
APY29_RS01550  361249 ..  361259 +  -4.6  -3.59262   GAACGTCTCCGACCC                 GCGG CCC CTGC                 TTTACGAATCTCCAA  55 302
APY29_RS01560  364706 ..  364736 + -15.4  -5.76237   AGTTTCCGTTCCCTG       GCCCCGCCGACC TCCCCCT GGTCTGCGGGGC       TTTTTTATTTGTGTC 100 278
APY29_RS01565  365678 ..  365688 +  -2.4  -3.91911   GAAGAACAGCCCGCC                 CACG CCA CGCG                 TTTCGTTGCGGTGGC  56 408
APY29_RS01575  366472 ..  366488 +  -8.7  -2.71731   GCAAGGCAGCTGATC              TGCTGCA GGC TGCAGCG              TCCTTGCCCGCTCCC  54 28
APY29_RS01600  372562 ..  372577 +  -3.9  -3.73072   ACATAACGCGAAAAA              CGTGC CAGCAA GCGCG               TTTGCTGCAGGGCTT  54 114
APY29_RS01620 NONE
APY29_RS01625 NONE
APY29_RS01630  377521 ..  377534 +  -2.4   -3.9941   ACCCAGGATCTGAGT               TCCA CGCTTA TGGA                TTTCGTTGTACCGCA  57 28
APY29_RS01635 NONE
APY29_RS01640 NONE
APY29_RS01645  379346 ..  379371 +  -8.1  -2.71364   CCACGCTTTGCCACG         GCTCGGGCGCG TGAC CGCGCGCGGGA          TGGTTGCGCCGGTCG  54 12
APY29_RS01650 NONE
APY29_RS01655 NONE
APY29_RS01660 NONE
APY29_RS01665  382790 ..  382826 + -10.2  -3.04792   GCTGGGCAGGCGGTG   CGTATACAGCCGT-GCG ATAT CGCCGCCGCTGTGTACG    TGTTCGAAATGCTCC  60 100
APY29_RS01675  384398 ..  384421 + -14.6  -3.10905   GTTTCATTCTCTTAA          GCCGA-CGGGC GCC GCCCGTTCGGC          TTGAATGAATTGTCA  78 237
APY29_RS01705 NONE
APY29_RS01710  394313 ..  394342 +  -6.9  -3.19602   CGCGAAGGCCGCTGA       GCCAGCGCGGCGG GTAA CCGCTGCGGGTGC        TGTTCGTGTGCAGCC  53 26
APY29_RS01715 NONE
APY29_RS01720 NONE
APY29_RS01725  398512 ..  398522 +  -6.8  -3.68359   GGTGGGGGCTCGCCA                 TCCG CAT CGGA                 TTATGATTTTGAGGC  62 171
APY29_RS01740  402023 ..  402036 +  -3.1  -3.55622   ATCGCCCGGATCACC               GGT-CG GTA CGCACC               TTTGGAGCCCTTACC  51 99
        mgtE NONE
APY29_RS01750  406400 ..  406419 +  -5.6  -3.14229   ACCGCACGCCGGATC            TGCC-GGGC CTC GCCCTGGCC            TATTGCTCCGGCTGT  51 72
APY29_RS01755  407576 ..  407592 +  -2.1  -3.55368   CGCCTTGCTGGCCAT              CGGGCGG GCG TCGCTAG              TTCTGTCGCTTGGCT  49 98
APY29_RS01770  411137 ..  411155 +   -16  -3.74747   CCGCGCCTTTGGCGC             GCCCCCTG ACT CAGGGGGC             TTTCCTCCAGATTGA  93 111
APY29_RS01780 NONE
APY29_RS01785 NONE
APY29_RS01790  413132 ..  413144 +  -4.7  -2.78384   CAGGTGGAAGCGGCG                GTCCG CAG CGGCC                TGTGATGGCGACGGG  44 8
APY29_RS01795  413618 ..  413648 +  -2.2  -3.00798   CCTGGACCTGAGTTT       CCTGCCGACGCTGC GTA GCTGAGCGGGCTGG       CTTTCCTTCCTTCTG  41 4
APY29_RS01800  414095 ..  414134 +    -5  -2.87931   AGCAGCCGATAGCGA CTGCACCGTCGCATGCGG GCGTGG CCG-GTGCT-CGGTGCGG  TATGTGCCACGTGGA  46 42
APY29_RS01805  414511 ..  414523 +  -6.3  -2.62515   ACGTCGCGCAGGATC                TCTTC TTC GAAGA                TGGTCTGGCCCAGTT  46 324
APY29_RS01835  419269 ..  419292 +  -4.4  -3.64703   GCGACAATGCCAGCG          CGCGGCGGAA GTGG TGCCGTAGCG           TTTCGGTCGAGCCGA  55 176
APY29_RS01845 NONE
APY29_RS01850  422943 ..  422955 +  -3.3  -3.07816   CAGGCCGAAGATATT                CTGGG TCG CCTGG                TTGCATCGCTGGACG  43 56
APY29_RS01855 NONE
APY29_RS01865  425883 ..  425916 + -10.1   -2.8294   GCTGTGGTCCATGCG     CGTGGCACGGTCTGC ATGG GCGGGTCGCGCCCCG      TCGTTCTAACGCGTG  61 77
APY29_RS01875 NONE
APY29_RS01880 NONE
APY29_RS01885 NONE
APY29_RS01890 NONE
APY29_RS01895  432495 ..  432526 + -20.3    -3.727   GCACCATCGCCACAA      CGCAAAAGCCCGC ATCGCG GCGGGCTTTTGCG       TTTCCATGTCATCGA 100 153
APY29_RS01930 NONE
APY29_RS01935  443892 ..  443908 +  -4.4  -3.15579   AGCTGCGGAAAACAG              GGAGTG ACCAC TACTCC              TTGGTCAGAGATTCC  47 69
APY29_RS01945 NONE
APY29_RS01950 NONE
APY29_RS01955  447366 ..  447411 + -24.1  -2.56715   GGCGGATGCAAAACC ACAGGGCGCGATGGAAGGCTG CAAA CAGTCATCCATCGCGCCCTGG TGCATTGATGCAGGT 100 49
APY29_RS01965  448422 ..  448448 +  -5.6  -2.87132   ACATGCGTCTGCGCG         TGCCGCGTGCGC GAG GCGAGCGGGGCC         TGTGTCGCCAGCGCG  48 68
APY29_RS01970  449596 ..  449625 + -16.4  -3.01712   AACACGCTGAGCGCG       AGCGCCTGCGGC CACGTC GCCGCAGGCGCA        TCTTAGAGCGGCCAA  84 31
APY29_RS01985  452264 ..  452274 +    -4  -4.60924   ACGACGTTGGCCATG                 GAAA AGG TTTC                 TTTTTCCGAGCTTTC  73 513
APY29_RS01995  455748 ..  455765 +  -4.1  -4.16016   GCGAGGGCAACACGC             CAGTCAG TTCG CTGGTTG              TTTATTGAAGAATGA  63 350
APY29_RS02005 NONE
APY29_RS02010  458034 ..  458047 +  -5.9  -2.73364   GTTTGCCCGCTGGCA               CGGGT CCGC GCCCG                TGATTCCGCTCAAAG  46 9
APY29_RS02015  458467 ..  458490 +  -7.4  -3.03124   GCACGGGATTCGCCG          GGTCGCC-GCT GCA AGCAGGCAACC          TGTTCAGCCGTGCGG  54 209
APY29_RS02020  460747 ..  460757 +  -2.4  -2.58544   TGTTGCACGATGCAA                 GCCG GTG CCGC                 GTTGTGCAGCTACAC  38 86
APY29_RS02025 NONE
APY29_RS02030  462612 ..  462642 + -25.6  -5.75342   GGACTGATCCGCCCC       GACGACATCGCGGC TGC GCCGCGATGTCGTC       TTTTTTTTCGGGAGA 100 34
APY29_RS02035  463233 ..  463253 + -13.9  -3.08679   GAATTCGCCACCACG            CCGGCGCGC TGA GCGCGCCAG            TCTTGCCTGCCAGGC  75 14
APY29_RS02045  464268 ..  464290 +  -3.2  -2.91063   GTAGCCGTGATGCTG           GCCGCCCATG CAT CACCAGCGGC           ATTTGCATTTGCGTC  42 253
APY29_RS02050  465480 ..  465493 +  -4.5  -2.64155   CCGATACGCGGTCCT               GGCGA GTCG TTGCC                TGACTTTGGCCCACC  41 9
APY29_RS02055  466134 ..  466159 +  -6.9    -3.281   ACGCGACGATAACCA         CTAAACGTAGA TAGT TCTGCGTTCAG          TCTTATAAATTCCCC  55 22
APY29_RS02060 NONE
APY29_RS02065 NONE
APY29_RS02070 NONE
APY29_RS02075  471366 ..  471387 + -10.9  -2.62184   TGCTTGGTGAACGAT           CGCACA-GGC GAG GCCATGTGCG           TGATGTCGACCGCGG  62 44
APY29_RS02095 NONE
APY29_RS02100 NONE
APY29_RS02105  475531 ..  475545 + -12.8  -2.52543   GCTAGAATGCGCACC               GGCGCG CAA CGCGCC               TGCCTTCGCCGGCAT  67 36
APY29_RS02110  475977 ..  475996 +  -4.9  -3.73775   AAGCGAAAATGTAGA            GGCGGCT TTAGTT AGCAGCC             TTTCGTCGGACTGAC  58 217
APY29_RS02135  479995 ..  480009 +  -7.8  -4.74103   ACTGCACACGCACAT               CGCGAC TGA GTCGTG               TTTTTGGCTTCAAGG  86 17
        rocF  483894 ..  483909 +  -4.6  -3.01712   ATTTGGCGCCAAGCC              AGGTGC GCTG GCACCG               TATTGAACGAGGACG  47 97
APY29_RS02165 NONE
APY29_RS02170  484313 ..  484328 + -11.8  -5.24531   CCGCATGCAAAAAGA              CGGGCC GCAA GGCCCG               TTTTTTGTGCGCGCT 100 48
APY29_RS02175  484773 ..  484793 + -15.4  -3.41878   GCAGCTCGCAGACGA            CGGGCCGC CTGGT GCGGCCCG            TTCTGCGTTGAAGCG  85 72
APY29_RS02180 NONE
APY29_RS02185  487309 ..  487324 +  -6.8  -2.80113   GGACCTTCTGCGGCA              TGCCGT CTTT ACGGCG               TGTCCTGCGATGGTG  49 64
APY29_RS02190 NONE
APY29_RS02195  489560 ..  489591 +  -5.2  -3.21925   CACGGATAGCGCTTT     GCCAGCGCCTGGAC GATCAA GTC-AGGTGC-GGC      TTGGTCCTGGCGTGT  51 126
APY29_RS02205  490918 ..  490932 +  -2.7  -2.78384   ACCTTCGCCAAGGCG               CGGCG ATGAG CGCGG               TGTCGTCGCAGGAAG  39 17
        rarD  491837 ..  491864 +  -6.2  -3.14881   GAGGCGCTGAGTCAG        CGCCTCACCGCAC GCA GTGCG-TGTGGCA        TTCATGGGGCGATTA  51 31
APY29_RS02240  499661 ..  499691 +  -5.2  -3.27475   TAACGCGCCCTGCTT       GCGCTGCCAAGTGC ACG GCATGCGTCGGCGC       TGTTATCGTGCGCAA  50 38
APY29_RS02245  500380 ..  500393 +  -5.9  -3.14132   GCGTGGGCCTTGCGT               TGCCG GGTG CGGCG                TTGCTCGCAGAAGCG  51 70
APY29_RS02250  501410 ..  501425 +  -8.2  -2.59431   TATTTCGTCCGCACC              CTCCGC CCCT GCGGGG               TACCTTCTCCCCAGG  53 106
APY29_RS02265 NONE
APY29_RS02270  504794 ..  504839 +  -9.6  -2.71364   CGCGAACGCCGAGCG CAGTGCCAGCGCTTCGCCGCC GGCAG GGCGGCCAGG-GCGGTCGCTG TCGTTCCAGGCGTAG  55 126
APY29_RS02310  512529 ..  512551 +  -6.2  -3.05596   TCACGCGTTGAGGTT           GTCACGCTGC GGC GCAGGGTGAG           TTGCCTGGGCCGCTA  49 30
APY29_RS02315  513302 ..  513346 +  -4.2  -4.19238   GCCTCGCCGAACTCG CGTTGCATGAGCTCGGCAAGC ATGC GTTTGTCCTGCTCGGGCA-CG TTTTCGAATTGCGCA  65 408
APY29_RS02365 NONE
APY29_RS02370  521520 ..  521561 + -21.6  -2.71712   CCTGGTTCAGCGCGT TGCGCTCGCCGCGGCGCT TATTAC AGCGCCGCGGCGATCACA  CTTTAAACGCGCGGG 100 235
APY29_RS02400  526293 ..  526321 +  -9.5  -2.76189   GCTGCCTCTTGGTTT        TCGTAGGCTACGG AAG CCGTCTCCTGCGA        TGCTTCCATCGCTTC  57 20
APY29_RS02410 NONE
APY29_RS02415  529641 ..  529657 + -15.1  -5.45652   TGATCGACATCGAAA              GGCCGCC AAT GGCGGCC              TTTTTTGTTGCCGGT 100 58
APY29_RS02425  531980 ..  531991 +  -7.2  -2.78463   TACCGTTGTAGTGAG                GCGC AGCG GCGC                 TGTGGTCGCCGGCCT  52 210
APY29_RS02445  535304 ..  535333 + -10.6  -3.13403   GGGGTTCGATGCCCT       CGGCCCGCGCAA CGTCGA TAGCGGGGGCCG        TATTGCTGAGCCGGC  64 88
APY29_RS02450 NONE
APY29_RS02455  538209 ..  538235 + -12.2  -3.14344   GGTGATGCCGAACGC         ATGCAGCCGGCG TAG CGCCTGCTGCAA         TTGCTGGAAGACCTC  69 524
APY29_RS02465  539956 ..  539973 +  -9.1  -3.37796   ACCAATGGCAAAGAA             GGGCG-GC AGC GCTCGCCC             TTCTGCGTCATGCCG  63 46
APY29_RS02470  541023 ..  541049 + -10.8  -2.52464   TCACCGCCAAGCGGG         CGCGGCCGGT CGCTGGA ACCCGCCGCG         TCCATTCAAGCGCCA  62 312
        speA  544401 ..  544429 +  -4.6  -3.89814   TCGAGCGGTCGCGCG       CGCTTATCGAGGC AGAC GCATTGA-AAGCG        TATTTTCTCTCGTAA  60 334
APY29_RS02485 NONE
APY29_RS02490  550311 ..  550333 +  -4.8  -3.14344   TCGCATAAGCATGGG           ATGCTGCG CATCCAC CGCAGCAG           TTGATGCGCGCACTG  48 33
APY29_RS02495  551596 ..  551612 + -15.1  -4.21462   GGGAGTTGAAAAAAA              GCCGCGC AAT GCGCGGC              TTTTCGATACTCGGT 100 70
       coaBC NONE
APY29_RS02530 NONE
APY29_RS02535  560849 ..  560862 +  -5.9  -3.06315   TATCGCGTCGGTGTA               CGCGG TCAC CCGTG                TGTTCCACCTGTTCC  49 128
APY29_RS02560  564725 ..  564751 +  -2.9  -3.12351   GGCGGTCCACCTTGG         CGGGATTCATG GCCGA CGAGGATCCTG         TTGGATGTGCAAGCG  44 269
         xth  569258 ..  569306 +    -8  -3.53343   AAGGCTGGCGTGGTA TCCAGC-GCGCCTTCGCCAC-GCC ATC GGCGGCGACCATGGCGCTGCTGGG TTTCGGCAGCGGCTT  60 388
APY29_RS02595 NONE
APY29_RS02600  570975 ..  570989 +  -3.4  -2.52896   GGTAATCCGGGTCCA               GCCCGT ACC GCGCGC               TGGATTCCACCATCG  39 201
APY29_RS02615  575603 ..  575615 +  -5.5  -3.01712   AAGCAGCGTCAAACA                CCTCG AAA TGAGG                TGTTGACGGCAAGAA  49 472
APY29_RS02620  577505 ..  577521 +  -4.3  -3.06796   AGGCCGGTATGCGAA              AGTCCCA TCA TGGGGCC              TTAGCTCAGCTGGGA  45 110
APY29_RS02625 NONE
APY29_RS02630  577890 ..  577907 +  -5.5  -3.54475   CAACACGACAGATAG             CTCCGAG GCAA CTTGGGG              TTATATGGTCAAGCG  57 229
APY29_RS02635 NONE
         rrf  581045 ..  581075 + -18.4  -5.00616   CAGGGGCTTTACCCC       GAATCCCTCAGTCC AAT GGACTGAGGGTTTC       TTTTTTGCGCCAGCG 100 36
APY29_RS02655 NONE
        coxB  586788 ..  586798 +  -3.2  -2.76263   GCCCGCAACCGCTCG                 CTTC GCA GAGG                 TCGTTCCGTCATGGC  40 43
        ctaD NONE
APY29_RS02670  588558 ..  588601 + -16.6  -2.78073   CGCCTCGGGAGTCAT CGGGCGGTGAGTGCACGCGC GCCC GCGCATGCACCAACCGCCGG CTTGTTCAAGCTGCT  81 16
APY29_RS02675 NONE
APY29_RS02680  590402 ..  590425 +  -4.6  -4.68424   GCCCCGGGTGCAGTC          GGCGTGGTGAT GGC ATTGC-ACGCC          TTTTTGCGTCGCTTG  78 353
APY29_RS02690 NONE
APY29_RS02695 NONE
APY29_RS02700 NONE
APY29_RS02705  594132 ..  594146 +  -5.7  -4.66537   TGGTAGTTTTGCTGT               TGCAG CTGGA CTGCA               TTTTCTGTTGCAGAC  77 316
        tsaD NONE
        folB  603042 ..  603064 +  -2.6  -3.28791   CGGTGGGCGTGATCA           TCGAGCGG GAACGCG CCGCCTGA           TTGTCGCGAACCGCT  45 3
APY29_RS02755  605559 ..  605586 + -12.7   -3.4072   GTCGCCATCGCGCTT        GCCGGTGCAGC GCATCG GATGCACCGGC         TTATGCTGCGGAATC  76 121
APY29_RS02765  607421 ..  607451 +  -6.7  -4.70879   AAAGATCGCGCGATG       CAACAACGCCACC TTGAC GGTGGCGCTGCCG       TTTTTAGCGTTTAGG  81 47
APY29_RS02800  614750 ..  614767 +  -6.9  -3.01712   ACGCGCGGCTTGATC             TGCCGCG CAAA CGCGCCA              TCTTGCAAGGGAACG  51 81
APY29_RS02805  615593 ..  615630 + -13.3  -2.64735   GCTCGCGATCGGTTG   GCCGCTTGCGAGACGCG TGGA TGCGACACGCAAGCAGC    TAGTGTGGATGCAGT  67 86
APY29_RS02810  616005 ..  616027 +  -9.8  -3.51825   CGCCTGAGCCATTGT           GCGGGCCG CCGCATC TGGCCCGC           TTGTGGTTGCGATGC  68 34
APY29_RS02815  616737 ..  616750 +  -5.2  -3.53031   TTTTGCGCGAAATTG               CGCC GGGTTG GGCG                TTCATTTGCGATGGG  53 165
APY29_RS02820  617292 ..  617319 + -15.6  -4.66987   AACAGGATGGACACG        CGGGAGCGATCT GCCA GGGTCGCTCCCG         TTTTGTTGACGTCTG 100 140
APY29_RS02830  617844 ..  617854 +  -2.4  -2.52464   TGCGCTGCTAAACTT                 GCCC CAT GAGC                 TCACTTGCACAGCGC  37 58
APY29_RS02835 NONE
APY29_RS02840 NONE
APY29_RS02845  619677 ..  619704 +  -9.8   -2.6927   CTGGTCGGAATCAGA        GCGCACTGGGCCG CTG CGGCCTAC-GCGC        TCATCTGTGCCCGAT  60 163
APY29_RS02850  620428 ..  620460 +  -8.4  -2.94416   AGCGAAGCGGCCGAA     GCGGCGGCG-CAG-GC CGG GCTCTGACGCGGTCGC     TGTGTCGTCGCGCTA  55 2
APY29_RS02855  622187 ..  622200 +  -9.5  -3.29144   TGGGCGGCCGGGCGA               CGCGC CGCT GCGCG                TTCTGCACGGCGTGC  61 230
APY29_RS02875  631632 ..  631662 + -10.5  -3.71527   GGGTGAATGGGGAAT      G-GGGAATCGTCCG TGGC TGGGCGATTCCCGC       TTTCGCTGGTTGGGC  74 35
        queF  632610 ..  632642 +    -9  -2.70932   AGATCGCGCTCATGC      GGGATCGCGCGGGC TTCAC GGCGGCGCGATCCA      TGCTTAACAGCGCCC  57 39
APY29_RS02885  633012 ..  633025 +  -2.3  -2.70932   GGGTCGGCTTCCAGT               CGCTG GCGG CAACG                TCATTCAACAAACCC  39 45
APY29_RS02890  633749 ..  633771 +   -12  -5.10461   GAGCCACGCAAACAG           GGCGCGAC CGATCAA GTCGCGCC           TTTTTGTTGCATCGC 100 120
APY29_RS02895  636274 ..  636309 + -19.8  -3.53012   TGTCTCGCATGTCGT    CTGCAAGGCCCGTCTC GGAA GAGACGGGCCTTGTCG     TTTCAGCGAAACGGC 100 58
APY29_RS02905 NONE
APY29_RS02910  639652 ..  639668 + -15.1  -4.81551   GCCTCACACAAAAAA              GCCCCGC AAT GCGGGGC              TTTTTCGTCTCGATA 100 320
APY29_RS02925  644117 ..  644136 +  -4.2  -3.53811   GCGCTCCGGCATAAT            CGCTGAAT GACC GTTCTGCG             TTTCGACAACGTCAG  53 95
        ftsE NONE
APY29_RS02935 NONE
APY29_RS02940 NONE
APY29_RS02945  647465 ..  647503 +  -5.2  -2.74012   CCGAACGTCCTATAA   ATGGAATGCTGGGAAC TCTTTCT GTACCCGGCAGTCCAA   TAGTTCGACTGCTAA  44 161
        rpoH  648433 ..  648459 + -23.8  -2.99471   GCGCGAGTGTTTGCA         CAGACGGCCCGG TTT CCGGGCCGTCTG         TCTATGTGGGGCTAC 100 54
APY29_RS02965 NONE
APY29_RS02970 NONE
APY29_RS02975  652653 ..  652673 +  -3.2  -4.52589   ATGGGCCTTGTACAT           CGCGCGACT AAAT AGCC-CGCG            TTTTCTGTAGGAGCG  67 120
APY29_RS02985 NONE
APY29_RS02990  657105 ..  657153 +    -8  -4.66833   AAAGCGCCAACTGGC GCGTTGATCGCTC-G-CGCCGCCG GTT CGGCGCCGTCAGCGCGCGCAATGC TTTTTAGCGTTGCGC  83 19
APY29_RS03000  660173 ..  660192 +  -3.4  -3.64703   GCCATCGATCTGTAT            GCAGCGTC TTTC GACGGAGC             TTTCCATGAACCACC  51 85
        sppA  662130 ..  662160 + -19.1  -3.89346   GAGCGAGTGATGCAT       CGACAACGCCGGC CATGT GCCGGCGTTGTTG       TTTCTAAAGTCGGGA 100 56
APY29_RS03015  664104 ..  664147 + -10.1  -3.25223   AGCGGTCGGTGACCA CCTCGCAGGCGCTGCCGCCC CCAGT GGCCGGCC-CGCCGGCCAGG TTGGTGGTCTGCATC  63 374
APY29_RS03065  674618 ..  674632 +  -7.8   -3.2496   TGATGGATGAGCCGC               TGCCTG CAG CGGGCA               TTCAATTCTCGGTTG  56 221
APY29_RS03070 NONE
APY29_RS03075 NONE
APY29_RS03080  678848 ..  678868 +  -2.3  -3.86897   GCGCAACCCACAGGC            ATGCGCACG TGC CGGGCGCCC            TTTGTACGGCGTCAA  54 45
APY29_RS03085  680302 ..  680321 +  -5.6  -4.08945   CAGCCGCATATGTTG            CATGCGCA GGCA TGCGCGCG             TTTTGAGCGACTGCT  65 56
APY29_RS03095  682791 ..  682822 +   -10  -3.31144   CGGAGAGCCGATCCA      GCGGCGAGCGTTGC AGTT GCAGCGCCTGCAGC       TTGTCCAGCTCGGCC  63 468
APY29_RS03120 NONE
APY29_RS03125  686900 ..  686915 +  -3.2  -3.36327   GCCGCTGCCCGGCGG              GCGC AGGGTGTA GCGC               TTGTAGGTCCACTGA  48 142
APY29_RS03135  688325 ..  688359 +  -3.5  -2.83641   CGTCCACCAGCGGTC    CCGTCTTGAA-TCCGG CAGA CCGGGCTTCACGCTGG     TATAATGCTAGGTTC  42 49
APY29_RS03140  690316 ..  690347 +   -18  -3.35679   ACCGTGCAGTGATCA      CACAGCAGCCCCGC TCAT GCGGGGCTGTTGCG       TTATGGCTCAGGCAG  93 54
APY29_RS03145  691119 ..  691136 + -12.7  -4.93365   AATCTGATGCGCAAA             GCCCAGC CGGT GCTGGGC              TTTTTCGTTGTGGAC 100 344
APY29_RS03150  691489 ..  691533 +  -6.5  -3.36327   CAATAAAGTGAGTCA GACTGTGAGTCGCAGAGCGGC AGTGG GTCGCTC--CGACTCACAAAC TTCTGACTCACATGC  55 146
APY29_RS03155  692755 ..  692771 +  -3.6  -4.15106   GTCGGGTGAGCTAAA              CGCCTC AGGCA GAAGCG              TTTTCGGCATTCATC  61 27
APY29_RS03160 NONE
APY29_RS03165 NONE
APY29_RS03170 NONE
APY29_RS03175 NONE
APY29_RS03180 NONE
APY29_RS03185 NONE
APY29_RS03190 NONE
APY29_RS03195 NONE
APY29_RS03200  709497 ..  709516 +  -3.4  -2.57211   GAGTCGTAGTGGCTG            GTCTCCAG CAGG CGGGTGAC             GTTGTCCGGCAGCGT  39 32
APY29_RS03205 NONE
APY29_RS03210 NONE
APY29_RS03215  711192 ..  711202 +  -2.4  -2.79796   ACCGCAAGCCTTGAA                 ACCG GGG CGGG                 TGTGATCAAGTCGCC  39 10
         map NONE
APY29_RS03225  712151 ..  712163 +  -3.4  -2.72043   ACACCGCGCGCGACA                TCAG CGTGA CTGA                ATTTCGCCGGCGGTT  40 17
APY29_RS03230  712731 ..  712748 +  -2.7  -2.90075   GGTCCAGGTGTTTGA             C-GTGCAT GTA ATGCGCCG             TGTGGTTGCCGGCGC  40 74
APY29_RS03235  712992 ..  713010 +   -11  -3.38812   GATGGCGCGCGGCTG             CAGCTCGG TCA CTGAGCTG             TGTTGTTCGCGCCCA  68 11
APY29_RS03245  713662 ..  713697 +  -2.3  -2.60496   TGTCGACGGCACGAG    GTGCCACGGCCGCCA CTGGAT TGGCCGCCGGTCCGC     GTCTTTCAAGGCCGG  38 106
APY29_RS03250 NONE
APY29_RS03255  714695 ..  714716 +  -8.7  -3.53224   CGCCACGACCCGATC           CAGTGCCGA GGCA TCGGTGCTG            TTTGCCAGCACGATG  62 235
APY29_RS03270  716687 ..  716744 +    -4  -3.36515   CTCGGCCACCTTGGC GGGCTGCGCTACCAGCGAAAG-ATGGC TGGAT GCGATGCTGATGCTGGTGGCGCCGATC TGTTTGGCGATGGCG  49 125
APY29_RS03285  718300 ..  718335 +  -5.2  -4.72272   CCACTGCAGGCGCGC    ATCGCCATCGGCGCGG AACG CCGCATCGTTGGCCAG     TTTTTGCTCGAACGC  81 133
APY29_RS03295 NONE
APY29_RS03300 NONE
APY29_RS03305  723777 ..  723793 +  -3.6  -4.29176   GCCCTGCTTCATAGC              GGTGCC CGCGT GTCACC              TTTTGCCTTGCGTCT  64 27
APY29_RS03310  726133 ..  726145 +  -6.9  -3.31792   CAGTGACTGCTGTGC                GCCGG CAG CTGGC                TTCTGGAGGTCGTGG  55 156
APY29_RS03335  731615 ..  731653 +  -7.3  -2.83903   GCAACTGCTGTAACC  GCCAACGTCGTACGGGCG GTGA CGCCTGCGCGGCG-TGCC   TGAGTTTTTGAGCAC  53 28
APY29_RS03350  733403 ..  733419 +  -2.9  -4.11692   TGCCGATGCATTCCA              GCAAGTG CGG CATGTGC              TTTTGCACATGCGTC  59 248
APY29_RS03360  735371 ..  735391 +  -2.4  -3.40403   AGCGTGCGAGCCGCC            CGAGTCGC AGCCG GCCACCCG            TTGTCCTACACGGGA  47 83
APY29_RS03365  735618 ..  735637 +   -10  -4.36914   CTGCAGGACGTAAAA            CAGGCAGC GAAC GTTGCCTG             TTTTCTGCGCCAGCG  85 47
APY29_RS03400  744540 ..  744551 +  -7.2  -3.55444   GACTGGCGGGTGAAG                CGGC TTGA GCCG                 TTTGCGAGGTGGCGA  62 28
APY29_RS03405  744918 ..  744936 + -17.4  -3.34609   GCTAGCATCGCTGGA             GCGCCCGC CAC GCGGGCGC             TGTTCGTTTGCCTGG  91 49
APY29_RS03425  748519 ..  748531 +  -3.3  -3.45027   CATTGTGGACAGAAG                CGCTC ATG GACCG                TCTTTCCTGCGCCAT  49 53
APY29_RS03430 NONE
APY29_RS03435  750177 ..  750187 +  -2.4  -3.18912   AGCAGAAGGAAAACG                 GCAC GCC GCGC                 TTCATCAATGCATCG  42 156
APY29_RS03445  754142 ..  754163 +  -6.6  -3.05384   GAGATCCAGCTGCCG           CTCAACCCG GTGAA CGGGT-GAG           TTGGATCGCAAGGCG  51 5
APY29_RS03450 NONE
APY29_RS03455  755208 ..  755238 +  -8.3  -4.32034   CGCGCCACGCAGCCA      CGAAAGAAGGGGCCC AGC GGGCCCCT-CA-TCG      TTTTGGTAGTGCTGA  79 46
APY29_RS03475  757541 ..  757560 +  -4.2  -3.14344   TGGTCGCTACGCTAG            TCCTGCGA GTGT TAGCGGGA             TTGGTGGAAACGGTG  47 26
APY29_RS03480  757958 ..  757968 +  -3.2  -2.74144   GCCCCGGTTTTAGAG                 GAGG CTC CTTC                 GTTTGAGAATGGAGC  40 28
APY29_RS03485  759629 ..  759675 +  -6.5  -3.66018   ACAACCGCGCCAGCT CGCGCACCGCCGCTTCCGATGCG GCG CG-ATCGGGCATGGCG-TCCGCG TTATTGAAGTCGTGC  59 444
APY29_RS03500 NONE
APY29_RS03505 NONE
APY29_RS03510  764001 ..  764012 +  -5.8  -2.72558   ACTGACGGCAAGCGG                TCGC TTCT GCGA                 TCATTACCGGCTTGT  46 272
APY29_RS03515  765645 ..  765672 +  -4.8  -3.25823   CGGTGGAAAAGGCGG        TTGCGCAGGCGTG AGT CGGG-CTGCGCAG        TTGCTCTGAAGCGCA  50 12
APY29_RS03520  766110 ..  766133 + -18.2  -5.15969   TGTTGAAACGCAAAA          CGGCCGATGG AGTT CCATCGGCCG           TTTTTTGCATTCGAA 100 157
APY29_RS03530  768762 ..  768772 +  -3.2  -4.07885   TGGCCAGGCCCGCAA                 CGTC GGC GATG                 TTTTCGCCCAGCGTC  59 525
APY29_RS03565 NONE
APY29_RS03570  776023 ..  776050 +    -4  -2.60496   CGGTCGCGGCATAGC        GCCGGGGTGC GGACGTGG GCGCATCGGC         ATGTTTGGGCCAAGA  41 27
APY29_RS03575  777464 ..  777477 +  -3.1  -4.07568   CACGGCAGGCGAGTC               TGTTC GACT GAGCA                TTTTCCGCCCGCAAC  58 15
APY29_RS03580  779207 ..  779220 +  -9.5  -3.91911   CCGGTCACTCCCTCA               CCGCC GTTT GGCGG                TTTGATTGCGGTCGC  74 134
APY29_RS03595  782540 ..  782555 + -10.4  -3.64703   GGGAATCGCAAGGGC              CACGGC GGTT GCCGTG               TTTGGGTAGGAGCGC  70 78
APY29_RS03600 NONE
APY29_RS03605 NONE
APY29_RS03610  785010 ..  785036 +  -6.5  -2.57211   ACCGTTGAAGCGCAC         GCCGACGCC GCGGTTGAG GGCATCGGC         ATTATGGAACGGGCT  48 144
APY29_RS03620 NONE
APY29_RS03655  791812 ..  791833 +  -9.5  -3.06671   AAGGAAATCCGCCCC           TCCTGCTGCA GGA TGC-GCAGGA           TCTTGCGGTCGATCT  57 497
APY29_RS03665 NONE
         alr  794657 ..  794676 +   -15  -3.50853   GCCGACAGACAAAAA            CGGCGCGT TGCC ACGCGCCG             TTGTCATTCGAGGCC  83 268
APY29_RS03680 NONE
APY29_RS03685 NONE
APY29_RS03690  798676 ..  798688 +  -3.3  -4.48877   CCAACGCCGACCACT                AGCAC CCG GTGCG                TTTTCTGCCTCTTTC  67 286
APY29_RS03695  799042 ..  799065 +  -3.8  -3.08371   TTGCTGGGCGCCGAT          CCGCAAGTCAT GCC GTGACG-GCGG          TGTGTTGACGGTGTG  45 8
APY29_RS03700  800819 ..  800853 +  -6.3   -3.6581   GCCGCGTTCGCCGAT     CTGGTGCAGGCGG TAGCGGGGT CTGCCGGCGCCGG     TGTTTTCGGGGTAGT  59 359
APY29_RS03710 NONE
APY29_RS03715 NONE
APY29_RS03720  803777 ..  803793 +  -6.5  -3.64703   GCCGGGTGCTGTGCA              TGGTCGC GAC GCGACAA              TTTCGGTGCCCGCCG  59 259
APY29_RS03760  810229 ..  810242 +  -2.3  -3.57144   GATTAGCAACAGCGG               GGAAG CCGG CTGCC                TTTGCCAATCCCCAA  49 60
APY29_RS03765 NONE
APY29_RS03770  812122 ..  812136 +  -7.1  -3.21099   GGTAGGTTGAGCGCC               TGCGG CAGGT CCGCA               TTCCTCCTCCCACGG  53 134
APY29_RS03775  812940 ..  812976 + -12.9  -4.07568   CAGAAGTACAAGGGC    GCGGTGCTGCCGGCGTT TTG AGTGCGGGCAGCGGCGC    TTTTACACCCAGGCG  86 5
APY29_RS03785  815199 ..  815209 +  -8.2  -3.61398   TTGCAGCTCGCCAGG                 CGGG TGT CCCG                 TTCTTGCCAAAGGGC  62 205
APY29_RS03795  816010 ..  816044 + -18.1  -2.77222   TATTGGCGGTGATCC    TGTTACTGCCAGC-CC TCTC GGTGCTGGCAGTAACA     ATTTAAAGTGCTCCT  86 29
APY29_RS03815  818844 ..  818856 +  -6.2  -2.56164   GACCGCGCCGCCGTC                GCGG TGCCC CCGC                ATTGATCGTTGACGC  46 88
APY29_RS03820  819800 ..  819816 +  -3.6  -5.00616   CATGCGGACGCTGCA              TCCCGC CGGGC GCGCGA              TTTTTTGCACGGCAA  78 55
APY29_RS03825 NONE
APY29_RS03830 NONE
        lpdA NONE
APY29_RS03840  824617 ..  824634 + -12.7  -3.35996   GTTAAAACGACAGAA             CCCCGCA TCGC TGCGGGG              TTCTGCATGAAGCTG  74 98
APY29_RS03850  826359 ..  826376 +  -3.3  -2.61199   GGCTGATTTTTCAGG             TTCTGGC TCTG GCCAGGC              GTTGATTCGAACTTA  39 3
APY29_RS03855 NONE
APY29_RS03860  827646 ..  827665 + -12.8  -3.55444   GATGAAGGTCGGAAA            GCGCCGCC GCGC GGTGGCGC             TTTCACCCCTAAACA  77 89
APY29_RS03865 NONE
APY29_RS03870 NONE
APY29_RS03875 NONE
APY29_RS03880  831284 ..  831340 +  -3.3  -3.76373   GCCGGGAATAGGGAA TGGAGAATCGGGAATGGTCGAGGCAGCAG CAC TTGAT-CTTC--CCATTCCCGATTC-CCG TTTCCCTATTCCCGA  54 40
        atpD NONE
APY29_RS03890  833460 ..  833490 +  -9.8  -4.57569   TGCAGATCAGAAGTT      CGAAA-CGCCGGC CATCGT GTCGGCGTTTTCG       TTTTTGGAGCGCTGC  95 98
APY29_RS03895  834256 ..  834290 +  -4.9  -3.86015   GAGCGGCCGACAAAC    CCTGCGCGCGTTCGCC TGAC GGTGAGTGCA-GCGGG     TTTGTCGGCCGCATC  60 93
        glmU  836810 ..  836838 +  -6.1  -3.16564   CGATCTCGCGGGTGA       GCGCAA-GGC-CA AGACC TGTGCCATTGCGC       TTGGTCGAATAGAAG  51 229
        glmS  846963 ..  846973 +  -4.6  -3.54424   TCTTGCCTTTGCACG                 TGGC CAT GCCG                 TTTCCAGGAGTGGCC  55 218
APY29_RS03950  847914 ..  847946 + -15.6   -2.8474   GAGCGGTGACGCATC      GGTCGCGCTGCATG GGGGA CATGCAGCGCGGCG      TACTTATCCATAGGG  79 346
APY29_RS03960  849275 ..  849322 +  -8.3  -3.50853   TGCTGATAGTAGTTC GCTTCTGCTTCGGCCGGTGGG ATGTCG CCGATCGGGCCAAGCAGGCGC TTGTGGTTGAACCAG  62 189
APY29_RS04000  859047 ..  859069 +  -3.4  -3.65199   GGCGCCGTGCTCAGC          CTGCTGGCG GTTGTG CGCCA-CGG           TTTGCCTGCCACGTT  51 141
APY29_RS04005  861233 ..  861256 +  -5.2  -5.63517   TTATGCGAAATTTAT          GCTTCATTCC TACT GGATTGCAGC           TTTTTTATTTAGGCA 100 103
APY29_RS04010  862537 ..  862555 +  -2.3  -3.07043   GTGACATCGCCCAGC             GGCGTGG ACGTG CCATGCG             TGTTGAGGTAATCGA  41 422
APY29_RS04025  865379 ..  865394 +  -2.4  -3.12999   GCCGCCGTTGGAGTG              AGCGGT CCGT GCCGCA               TTGCGTGTCGCATGC  43 25
         gph  866189 ..  866210 +  -7.3  -3.86346   GCGCGCTGCGCGATT           GGCGTGTGTT GCA GACAC-CGCC           TTTATCAAGGCGTAG  68 42
APY29_RS04035  868879 ..  868902 +    -3  -3.86311   GCGTGAGGAGAGCTT          CGATGCATCG CTAT CGGTGGACCG           TTTGGGTTTGCATGT  56 83
APY29_RS04040  869996 ..  870028 + -12.6  -3.36273   CGGTCCGCCGATGGC     GCGGCC-GCGCACCG GTAG CAGCGCGCTGGCCGC      TTCGTATTCGGCGAG  73 178
        bioD  871915 ..  871934 +  -2.7  -4.14472   GGGTCTTGCCTGATG            CGCCGGC CTGATC GCTGCCG             TTTTCGAACTGTTGC  59 165
APY29_RS04070  872945 ..  872964 +  -9.4  -3.40668   TGTGTCACCGTGACG            CATATCTG TATG CAGATATG             TAATTTTTGTTAGTA  65 136
APY29_RS04075  875760 ..  875784 +   -10  -3.54741   CGCGACCTCGTTCGT          GCGATGGTGG CCTGC CTGCCATCGC          TTTGAACGACTAATC  70 124
APY29_RS04080  878268 ..  878285 + -14.1  -4.27316   TGCGCCCACGAAAAA             GCCGCCC CGAA GGGCGGC              TTTTCAGTTCAACGC 100 160
APY29_RS04090  879986 ..  879999 +  -9.5  -3.29144   GCGCGCTGCACAAAA               CCGCG GTTT CGCGG                TTGTGCCCACGGTCA  63 88
APY29_RS04095 NONE
        maiA  882264 ..  882274 +  -8.2  -3.75292   TCGCGCGAGTCGGCA                 GCGC GCA GCGC                 TTCTTCCTGCTCGAT  65 516
APY29_RS04110  883743 ..  883765 +  -2.6  -2.60797   CCTCAATACCGGGGA          GGGCGGCCG ATGAAA CTG-CGCCC           CTTGCTGTATCTCGG  38 13
APY29_RS04115  884732 ..  884746 +  -4.2  -3.76373   GATTGAGGCAGGGAA               CGGC AAATGCG GCCG               TTTCGGTCTTGAACC  56 115
APY29_RS04120  885242 ..  885288 + -17.3  -4.03413   TAGAACAAGTTCACC GTCGCGGGCGGTGGC-GGCC TCCTCGTC GGCTTGCCACCGTCCGCGTC TTTATGTGGAGCGCT 100 55
APY29_RS04125 NONE
APY29_RS04130 NONE
APY29_RS04135 NONE
APY29_RS04140  891628 ..  891645 +  -6.3  -3.41229   GCCTCTCTCTTTCGG             TTTCCGC GATC GTGGAAA              TTCTGATCCCGCTCT  57 56
APY29_RS04145  892466 ..  892478 +  -3.3  -2.83343   CAAGAAATGGTGGAT                GCGCT ATG AGCGA                TGTCGTAATGCGTGT  42 17
APY29_RS04150  893773 ..  893790 +  -4.7  -2.74514   TTGCCGTCCGTGTCC             GCGCCGC CGGC GTGCCGC              TAATTCCAGGTTTCC  44 41
APY29_RS04155 NONE
APY29_RS04160  898511 ..  898557 +  -3.5   -3.5936   CCGTTGCTTTCCTGC ACGGCGATGCTCCGGA-CGCGC ATGG GCGTGATCCAGAGCGGGGCTGC TTTCACCAATTTCCG  51 63
         gmd NONE
APY29_RS04170  900763 ..  900773 +  -2.4  -3.35542   CTTTGGCTTACATTC                 TGCC CAT GGCC                 CTTTTTAACGATACC  45 229
APY29_RS04175  902054 ..  902066 +  -2.6  -3.53012   TGCCCCATGACGCTC                CGGG CAGAT CCTG                TTTAGGAAACAACGC  47 81
        rfbB NONE
        rfbA NONE
        rfbC NONE
        rfbD  916468 ..  916485 +  -9.1  -2.62463   CCAGGTGCTGGACAC             GCTCGCC CAAC GGTGAGC              CTTGTCGGTGCTGCC  56 10
APY29_RS04255  918218 ..  918244 + -13.6   -3.0814   GGCCATGGATAACGC         AGGACGGCGGCC ATA GGCCGCCGTCGA         TATTGCAGTCTACGT  75 254
APY29_RS04270 NONE
APY29_RS04275  922570 ..  922594 + -15.7   -4.1585   ATCGCTGCTTAAATA          GCCAGGGGCCT GTC ATGCCCCTGGC          TTTTAGAGATTCTGG 100 29
APY29_RS04285  925136 ..  925156 +  -8.1  -5.02476   CTAACAAAACTCCTC            CGCAGCCGC TAG GCGGGCGCG            TTTTTTAGCCGCTCT  93 197
APY29_RS04310  930224 ..  930258 + -15.8  -2.78679   AGGGGAAACACCCTG     CAATAAAAACGCCGGC ATG GCCGGCGCTCTTATTG     GTTTGAATCAAGCGG  78 40
        pssA  934204 ..  934217 +  -2.3  -4.25283   CGGCGCGTGCCCGAG               CTGCC ATGA GCCAG                TTTTCGTGAGCGACT  62 17
APY29_RS04335 NONE
        rimI  935211 ..  935232 +  -8.7  -2.77791   GACCGGTTGGCGTTG           TT-GCGCCGG ATG CCGGCGCTGA           TGGTCTTCGATTCGA  54 67
APY29_RS04345  937152 ..  937185 + -17.5  -3.62572   GGTGCAGCACCTAGT     TGCACAACGCCCGCA GTGA TGCGGGCGTTATGCG      TTTGGCGTGGTGATG 100 69
APY29_RS04355  942612 ..  942639 + -15.6  -3.92602   TACGTCCCTGTAAGC        TCCGTGGCGGCA TTCA TGCCGCCATGGG         TTTATGGCGTGTTCC  91 149
        lptF  949231 ..  949268 +  -2.5  -2.59475   GCCGCGTGTGTCGGC   CGAGGGCGCGCG-CATGA GGC TGACGCCGCGGGTCCACG   ATTGGTATGTCGGTC  38 9
        lptG NONE
APY29_RS04390  950730 ..  950744 +  -5.7  -3.32844   ATCGAAGATGCGGGA               GCTTC GATAA GAAGC               TTGTGGACTGCCGGC  52 101
        xerD  952776 ..  952800 +   -10  -3.01712   CCTCGTGCTGACGGG          CAGCGCCG GGCGCCATG CGGCGCTG          TATTCCAGGAAACAA  60 241
APY29_RS04415  953906 ..  953931 + -10.3  -4.04579   TCTGCGCAACGACAA         GGCCCGGGTCC GACT GCGTCCGGGCC          TTTGCTGTTTCTGGG  78 98
APY29_RS04430  958480 ..  958507 + -14.2  -3.60865   AACCGTGTCATTGGA        CGGTCGTGTGCA GCGA TGCATACGGCCG         TTGTCGTTTCCGGTG  85 80
APY29_RS04435  963116 ..  963146 +  -7.5  -3.05844   CGACCGGTCGATCGG      CCTGGGC-GCCGGC TTCG GCTGGTAGCGCAGG       TCTTGCCATCGCAGC  54 1
APY29_RS04440  965267 ..  965291 + -15.7  -5.39721   GTTTTGCGCAACCAA          GCCTGCTGGCG TCC TGCCAGCGGGC          TTTTTTGTCTGCTGC 100 185
APY29_RS04445  972181 ..  972194 +  -2.3  -3.32844   CGTGGGTGCCGGTTT               CGGCT GGTA AGGCG                TTATCGCATCAAGCG  45 16
APY29_RS04450  974316 ..  974346 + -20.5  -4.57341   GCGAAATAGTGTGAC       CGATGCCCCCGGC CAATC GCCGGGGGCATTG       TTTTTCAGGGCGATT 100 44
        gspE NONE
APY29_RS04460 NONE
APY29_RS04465 NONE
        gspG  978234 ..  978258 +  -3.3  -3.09635   GTACCAATAAGCGCT          CGCCATGCGCG TTG CGCGTCAGCCG          TTGCGTCATCGGCAT  43 31
        gspH NONE
APY29_RS04480 NONE
APY29_RS04485 NONE
APY29_RS04490 NONE
APY29_RS04495 NONE
APY29_RS04500 NONE
APY29_RS04505 NONE
        gspD  985537 ..  985547 +  -5.4  -3.05384   GAGTAGCACCTCAGT                 TTGG AGT CCAA                 TTCCCTACCCCAAGG  47 92
APY29_RS04515  987116 ..  987139 +  -3.2  -4.43309   TTTGTTTGGAGCTGT          TGATGGTTCAG GAT CT-ACCCATCA          TTTTGGTTGAGGTTG  67 467
APY29_RS04520  988250 ..  988263 +  -2.3  -3.60805   GCCGAACACGTCATC               CGGCT ATCG AGCAG                TTTCGAATCCGCTGT  49 318
APY29_RS04545 NONE
APY29_RS04550  994770 ..  994793 +  -4.6  -3.07994   CAGCCGCACAGGTGC          CGCGTTTGTT GCAA AACAAATGAG           TTGGATCGCGTTAAA  47 3
APY29_RS04555  995937 ..  995948 +  -7.2  -3.85698   CGGGCCATTCGTGGC                CGCC TGGT GGCG                 TTTCTAAGGGGCCGC  68 7
APY29_RS04560 NONE
APY29_RS04565 NONE
APY29_RS04570 1000349 .. 1000378 +  -6.9  -4.22214   GCACCTGTGATGCGC       CTCAGGCGGGCGC GGCT GCGCGCGCTGGCG        TTATTTTGCCTGCCT  72 206
        pncB NONE
APY29_RS04585 NONE
APY29_RS04590 1002910 .. 1002935 +  -6.7  -3.78934   TGCCCATTGTTCCCC         GCCGCAGGCAC CCAT GCGCTTGCCGC          TTGTTGTGCCGCACG  62 46
APY29_RS04595 NONE
APY29_RS04600 NONE
APY29_RS04605 NONE
APY29_RS04610 NONE
APY29_RS04615 1013310 .. 1013339 +  -9.2  -2.53876   ACGCGGCAGTAGACA       AACGAACGGCGC CTTCCA GCGCCGTTCGCA        TCGCTTCACATCACG  56 29
        arsC NONE
APY29_RS04635 NONE
APY29_RS04640 1017089 .. 1017113 + -15.7  -2.96984   GTGTCCATTGCGGCG          TGGCTGCCGCC ATG GACGGCAGCCA          TCTGTGCTGGATTTC  81 54
APY29_RS04650 1019530 .. 1019568 +    -8   -4.8543   GCGCAGCCGCAGCGG   TGTTGTGCGTGTCGGCGG TAC CGGTCGGCACGCACACGG   TTTTTGTCAAAGTTG  88 41
APY29_RS04680 1026321 .. 1026339 +  -2.2   -3.2056   GGTTGGAGGTCAGGA             TCGCCACG CGT CGCTGCGG             TTGCTGCGTATCGGT  42 484
APY29_RS04695 1028839 .. 1028887 +    -3  -3.07344   TGGCGGGGCGGCGAC CGCTCTGAGGTCCTGCGCA-CGGC GTG GCCGATG-GCGTGGAAGCAGAGCG TATGTTGCCGGATCC  43 18
APY29_RS04700 1031718 .. 1031746 +  -4.6  -3.70773   GAACGGCGGCCGGCG       GGTCAGATGCAGC GGTG GTTGCATG-GACC        TTGTTCGATCTGGAC  58 405
APY29_RS04725 NONE
APY29_RS04730 1039167 .. 1039185 +  -6.7  -3.06183   ATGACCCGCATTCAC             GTGACAC AGCGG GTGTCGC             TTGGATGCGCCTCCG  51 55
APY29_RS04735 NONE
APY29_RS04740 1040489 .. 1040499 +  -2.4  -3.66643   GGCCGTTGAACGATT                 CGAC GTA GGCG                 TTCTGGTTTGGTTTG  51 328
APY29_RS04750 1043022 .. 1043034 +  -4.1  -3.35798   ACGGGATGGCTATCT                TGCGT TTG ATGCA                TTGTCGCTCGAGGAT  49 425
APY29_RS04760 1043825 .. 1043846 +  -2.9  -3.42996   GGTCATTCCGCCGAG           CGAATCATG GGAT CTTGCTTCG            TTGTAGTCGATCATC  48 75
APY29_RS04770 1049872 .. 1049926 +  -6.2  -2.93723   AAGCCTGACGGAGTG TGTCGCTGTGTTTTCCCGCAAGGTCG TTA CGGTCTTGCGGTCATCCATGGCGCCG TATGCTTGCTGCACC  48 33
        rsgA NONE
APY29_RS04780 1052574 .. 1052586 +  -3.3  -3.02144   CCCCGCGCTCCTGTC                GGCCG CAT TGGTC                TGTTGGACGCAATCG  43 181
APY29_RS04785 1053376 .. 1053390 +  -7.1  -2.86011   GCAGAAACGCTGCTG               GCGCT GGCAA AGCGC               TGATCTTTGCAATTG  50 8
APY29_RS04800 1059559 .. 1059592 + -10.9  -3.18264   TGCGCTTGCGTAAGC     CGAAGGCGGTGGCGGC GTA GTCACC-CCGCCTGCG     TTGCTGCATAACGGC  67 6
APY29_RS04830 1065573 .. 1065622 +  -6.4  -3.25223   TGCGCCGGTGGAGCC GG-GCGCCG-AT-GGCTGAGCCGCT GGT GGTGGCACCGTCGATCCGGCGCACC TTGCTGCTGTACCTG  53 10
APY29_RS04835 NONE
APY29_RS04840 1068072 .. 1068082 +  -8.2  -3.29147   CGTCAGCGGTGTGGA                 GCGG CCA CCGC                 TTGGCTTGTCTTGGC  60 76
APY29_RS04845 1069225 .. 1069238 +  -3.1  -3.55444   GGTGATTTCGTAACG               GC-CCT GGT AGGCGC               TTTGGCGCGTGCCGC  49 379
APY29_RS04865 1072646 .. 1072658 +  -7.7  -3.21063   GTCTGTTTGAAGTGC                TCGAC GCT GTCGA                TCTTGGGTTTGGGTG  54 411
APY29_RS04885 1078017 .. 1078045 + -10.2  -3.12351   AAGTGCGGCTGGTTC        GCGTTGCGTGCC ACTTC GGCGCGCAGGGC        TTCGCTCTGCAGCGA  62 353
APY29_RS04895 1080524 .. 1080566 + -20.6  -4.08557   CGTTGATGCTTCCTA CGGCCCTGTCTTCCGTCGGT GTT AACGACGGGATGCAGGGCCG TTCTTGTTTGGCCGC 100 35
APY29_RS04900 1083146 .. 1083164 + -13.8  -2.52464   CAAGAAGGTACGGCT             TGCGCGCC AAT GGCGCGCG             TGCATTGGGGCGCCC  71 151
APY29_RS04910 NONE
APY29_RS04915 NONE
APY29_RS04920 1089803 .. 1089824 +  -5.1  -3.10344   TGGATCCACAGGTAC           TGGTCCGGCG CTT CGC-GCACCA           TGTCTTCGATCGCGG  49 181
APY29_RS04935 1092498 .. 1092513 + -11.8  -5.64274   TCGCGCACAAAAAAA              GCGGGC CTGG GCCCGC               TTTTTTTGTGCATCC 100 255
APY29_RS04955 NONE
        leuC NONE
        leuD 1102041 .. 1102051 +  -3.2  -3.22521   GCTCACCGCGCTGCG                 TGCG GAC TGCA                 TTAGATTGATGTCAA  44 62
        leuB 1103366 .. 1103386 +  -3.8  -3.55444   CCGGTATGCGTGCAA            GCGCCTGC AGTAG GCCGGAGC            TTTGCCACGTCGGCA  53 220
         ggt 1111931 .. 1111974 + -13.7  -2.87931   TGGTTGGCGAAGACG GCGTCTGGGCTGCCCCGGG CGACGA CCCGGCGCAGCGCGTGCGC TATGTACGCGATCGC  74 320
APY29_RS05010 1113761 .. 1113780 +   -15  -3.28924   GTGCCACACAGACAA            CGGCCTCC CGAA GGAGGCCG             TTGTGACAACACGTG  82 234
APY29_RS05025 1119457 .. 1119470 +  -4.5  -5.03314   TCTTTGTTGTTCTTG               CATGC CGAC GCGTG                TTTTTTGCCGATGAG  81 401
APY29_RS05030 NONE
APY29_RS05035 1122841 .. 1122860 +  -3.4  -2.90496   GCGTGACGCGCAAAG            CGACGGCG TTCA CGCAATCG             TAATTTGCACAGGGG  42 3
APY29_RS05040 1125782 .. 1125801 +   -15  -5.64421   GCGTGGTAAATAAAA            GACGGGCC GCAA GGCCCGTC             TTTTTTATTTGCAAT 100 52
APY29_RS05055 1128857 .. 1128867 +  -2.4  -3.95852   CTTTCCGCTTGACCT                 GCCG CGA CGGG                 TTTGGTTGGTCGGCT  54 231
APY29_RS05065 1132447 .. 1132465 +  -3.1  -3.17392   GCGTGGCGACCAGCG            TGACG-GC TTTG GCGCGTCG             TTCAGTTGCGGCGTG  44 201
APY29_RS05070 1133075 .. 1133101 +   -18   -3.6682   TCTGCATCCGTAACG         ACGAACCCCGGC CAG GCCGGGGTTCGC         TTTCAGTGCATGCAC 100 54
APY29_RS05080 1135318 .. 1135336 + -13.8  -3.01422   CACGGTCTCGGCCAT             GCGCGGCC TCT GGTCGCGC             TGCTTTCTCGCCGTG  75 68
         mpl NONE
APY29_RS05090 1137810 .. 1137863 + -13.2  -4.72007   CACACTGCGCACGCT TGAGTG-CGCTACCGACCGCATCCA TGCAC TGGATGCGCGCGATGGCGTCACTCG TTTCTTTTGATGGGG 100 237
APY29_RS05095 1138813 .. 1138826 +  -3.8   -3.8917   TTTGCATCGCCGAAC               TGCG CTGATT CGCA                TTCTTATCGTTCGCC  58 68
APY29_RS05105 1142308 .. 1142324 +  -2.1  -3.23853   GAATGGGGAATCGAA              GAGCGCA CCG TGCGAGC              TGTTCGTTCGGCGCC  43 63
APY29_RS05110 1143445 .. 1143472 + -10.4  -3.59262   CGTGGCCTTCCAGCC        CGCAGCGCGCGC AGTT GCGCGCATCGCG         TTTGCCGGTGTGGCC  67 243
APY29_RS05120 1145689 .. 1145720 + -15.2  -3.73775   GCCGTACCCTCACCC      CCA-ACCCCTCTCCC GAC GGGAGAGGGGCCTGG      TTTCATGCAAGTCCG  90 175
APY29_RS05130 1148929 .. 1148954 + -21.9  -2.57244   GTTCTGAGGTGCAGC         CGCGGCCGGCA AGGT TGCCGGCCGCG          TGCGTTGGTCCATGA 100 34
APY29_RS05135 NONE
APY29_RS05140 NONE
APY29_RS05145 NONE
APY29_RS05150 1152772 .. 1152786 +  -3.5  -3.36492   GATGCATTTTTCCGT               TACGC CTAGA GCGTG               TTATGCACTTGGAGG  46 17
         azu 1153936 .. 1153969 +  -2.3  -3.64703   CGCAGCATCGCCTTG     GCCGGCAAGCC CAGTTCCACGAT GGCCTGCCAGC      TTTGCGTGAGCGCGA  51 461
APY29_RS05170 NONE
APY29_RS05175 1161676 .. 1161703 + -21.4  -5.63517   TAACGGCAGTTCCGG        CAGCGACGCGTG ATGG CACGCGTCGCTG         TTTTTTGTTTCGCGG 100 54
APY29_RS05185 1163510 .. 1163550 + -11.8  -3.14878   AGCCTGGCCTACCTA GCCAGCGCGTAGACCGGCTC AAT GCGCCCG-C-GCGCGCTGGC TGTTCAATTCCACCA  70 153
APY29_RS05230 NONE
APY29_RS05235 1170578 .. 1170598 +  -3.9  -3.73783   ACCACGAACACGTTC            TCGCCGC CGTGCAC GCCGCGA            TTGTTCGCTTCGCTC  54 367
APY29_RS05280 1179458 .. 1179472 +  -5.6   -3.1855   CTCGGCCTGCTTGCT               TGGCGC GGT GCCCCA               TTCCCTATTCCCGAC  51 95
APY29_RS05285 NONE
APY29_RS05290 1180704 .. 1180725 +   -13  -4.68645   TGCGATCGATCAGAA           CAGCCCGC CTCGAC GCGGGCTG            TTTTCGTTTTCGGTC 100 54
APY29_RS05295 NONE
APY29_RS05300 NONE
APY29_RS05305 NONE
APY29_RS05310 1186693 .. 1186708 +  -6.1  -2.83012   GGCGACCTTGCACCG              GCTGC CTGGGC GCAGC               TATAATGCTCGGCTT  48 41
APY29_RS05315 1187015 .. 1187041 + -21.6  -5.00616   GACGGGCTGTACCGG         CAGCGGCCGCGC ATT GCGCGGCCGTTG         TTTTTTGCGGCACCG 100 49
APY29_RS05320 1188539 .. 1188557 + -17.4  -3.84451   ATCTGCGTAAACGAA             CGCCCCGC ATT GCGGGGCG             TTTGCATTTGGACGG 100 54
APY29_RS05335 NONE
APY29_RS05340 NONE
APY29_RS05345 NONE
APY29_RS05350 NONE
APY29_RS05355 NONE
APY29_RS05360 1198212 .. 1198237 + -16.9  -3.91897   CAACTAACTTTTTGC         GACCGAGGCCG AAGT TGGCCTCGGTC          TTTGTACGTGAAGCA 100 34
APY29_RS05365 NONE
APY29_RS05370 NONE
APY29_RS05375 NONE
APY29_RS05380 NONE
APY29_RS05385 NONE
APY29_RS05390 1205563 .. 1205585 +  -3.5  -3.45945   TTTGAGCGGCGACGC          TGCCTTG-CA GCGC TGATAAGGCA           TTGATTCTGGATGCG  49 216
APY29_RS05395 NONE
APY29_RS05400 1207722 .. 1207734 +  -9.1   -3.0634   GGAGAATAGGGGTCT                CCGCT TCC AGCGG                TGTTCCCCTCCGCTT  60 211
         tkt 1209790 .. 1209805 + -11.8  -5.52096   TGCTTGAAAGAAAAA              GCCGGC GAAA GCCGGC               TTTTTTGTTGGATTT 100 53
APY29_RS05415 1213497 .. 1213524 + -18.6  -5.24531   GTTGCCGTCAAACCG        CACAGGCACCTT GCGA AAGGTGCCTGTG         TTTTTTGTAGCGGCT 100 79
APY29_RS05420 1214455 .. 1214475 + -15.4  -3.92324   ATGATTTTCTTTCAA            GCGCCCGG TAAAT CCGGGCGC            TTTAGTGTTGAGGCG  91 82
APY29_RS05430 1216359 .. 1216375 +  -5.1  -2.82623   CAAAGTACGGGCCGT              TGGTGAC GAA GTTGCCA              TCCTTGTGGAAAAAC  46 199
APY29_RS05450 NONE
APY29_RS05455 NONE
APY29_RS05460 1223794 .. 1223825 +  -2.8  -3.14132   TAGGGAATCAATTCT      TCGC-GGCGCGCCTG ATC CAGGGCCGACAGCGG      TTCGTCGAACAGCAG  44 241
         gap 1231341 .. 1231358 + -14.1  -4.61873   GCAGTGATGAAACAG             GCCCCGG CATG CCGGGGC              TTTTCATTTGTCGGC 100 50
APY29_RS05510 1232006 .. 1232023 + -14.1  -4.84311   AATAACCGTTCAAAG             CGCCCGG TTCT CCGGGCG              TTTTCTTGTGTGAGG 100 36
APY29_RS05515 NONE
APY29_RS05520 1236385 .. 1236395 +  -4.6  -3.57144   CTGACTGCGACCGCT                 TCGC ACG GCGG                 TTTGCCGCTGCGGCG  55 37
APY29_RS05525 NONE
         pgk NONE
APY29_RS05535 1238631 .. 1238666 +  -4.7  -2.87931   TCGCGTTGCTCACGG   CAGCGCGGGCGCAG-GC GTAC GTACTGT-CCCGCACTG    TCTGTAAGACATGCC  46 150
         pyk 1240283 .. 1240314 + -20.2  -2.87564   CGGAACAGACGCGAC      ACACAACGGCGGCC CTAG GGCCGCCGTTGTGC       TGTGTGCCGACCTGG  93 75
APY29_RS05545 1240541 .. 1240554 +  -3.7  -2.87132   CACGATATAACGCAC               GCCGC AGGC GCAGC                TCTGTGGCGACAGAC  44 61
APY29_RS05550 NONE
APY29_RS05555 1241896 .. 1241930 + -20.2  -3.76224   CCGCCGCATCGATAG     AACAAAAACGCCGGCA GCA TGCCGGCGTTTTTGTG     TTTGCTGCATCCACG 100 63
APY29_RS05580 NONE
APY29_RS05585 1247596 .. 1247623 + -10.6  -3.25472   GTGGACGGCGCAGAG        CTGGCGATGCAGG TGA TC-GCATCGCCGG        TGTGTTTCGCGGTGT  66 399
APY29_RS05600 1250041 .. 1250093 +  -6.8  -3.23869   CACGCAGCAATGCCC CGTGCG-CGCCTGAGGTGTTCGGCG TGCC TGCCGGGCAGTGCGGGCGACTCGCG TCTTATCGAATGATG  53 62
APY29_RS05605 NONE
APY29_RS05610 1254134 .. 1254149 +  -2.5  -4.38712   TCGCGATCTGTCCAG              TCGGC AATCGG GCTGA               TTTTGTAACGCTCGC  65 346
APY29_RS05630 NONE
APY29_RS05635 1261453 .. 1261479 +  -8.1  -3.14211   GGTAAGTGTGCGCAG        CGGCGGTGTATG ACCC CATACA-TGCCG         TTGCTGCAGACCGGT  58 83
APY29_RS05640 NONE
APY29_RS05645 1266273 .. 1266285 +  -3.3  -3.80855   GCAGAGTCTTCACTT                TGGCA TTT TGCCC                TTCATTTTTCGCGCG  56 449
APY29_RS05655 1268022 .. 1268044 +    -4  -3.60627   GTCGTGTCCCAGCAC           CTGACCTTGC TTG GCAAGGACGC           TTTCCACTGCCGTCG  51 296
APY29_RS05670 1273373 .. 1273383 +  -2.4  -2.52896   TGGAACAGGCGCAAA                 CCGC CCA GCGC                 TGAGTTGCGGCGTGC  37 12
APY29_RS05675 1274251 .. 1274266 +    -6  -3.57144   ACGCATACGGCGAAA              CGGCCG GAAA CAGCCG               TTTGGCACTGCAAGC  57 253
APY29_RS05680 NONE
APY29_RS05685 1276718 .. 1276772 +   -10  -2.53911   GTGTGCAGGCGTGGA GTTGCCCT-AATCGATCGCGCGCGC GCAACG GTGCGCGCGATCGACCCAACGCAAC TCGATTCAGCGTTCG  59 16
APY29_RS05700 1284315 .. 1284329 +  -5.6  -2.72152   CCGTGCCGGTAATGC               CGGTCG AAA CGGTCG               TGGATTTGTCATCCC  46 123
APY29_RS05705 1287462 .. 1287491 + -12.2  -5.49729   GAATACCCTCCCATT       CGGCTACATCGT CGGGAA GCGATGTGGCCG        TTTTTTTGCGTGATT 100 194
APY29_RS05730 1292002 .. 1292036 +  -4.9  -3.15579   CTACAGGGCTGGCAG    CGCGCCGCTGGCGTCCG ATG CGGGCGC-GGTG-CGCA    TTGATGCGGCATTGA  48 72
APY29_RS05740 1293166 .. 1293191 +  -3.1  -3.86346   GTGCTGCTGGGGTAA         GCGCCAGGAAC GATT GCTGATGGCGC          TTTGTCAGCCGCTCG  56 26
APY29_RS05770 1299217 .. 1299240 +   -16  -3.58726   GTCATGCGCAACACG          TGAGGGCCGG GCAA CCGGCCCTCG           TTCTATCTGCGCACG  91 62
APY29_RS05775 1299381 .. 1299402 +  -3.7  -3.42274   CGCTCCAGAGCTTTC           GTCAAGTCTC TAA GTGAC-TGAC           TTGGTTGAATATTTT  51 33
APY29_RS05780 1301102 .. 1301115 +  -6.7  -3.12324   TCCCGCCAGGTCTCT               TGCCA AGAT TGGCA                TACTTTTCAATCGTT  53 128
APY29_RS05785 1302224 .. 1302236 +  -4.8  -4.42238   TGCGTTATCGGTGTG                CTGG AATTG CCAG                TTTTCGTTACGCTAC  71 119
APY29_RS05790 1303685 .. 1303713 +  -2.3  -3.08133   GGCGACTAAGTAGAT        CTTTCTGGCATCG TTC CCAAGTCAGGAGG        TTCCATGCGTACATC  41 56
APY29_RS05795 1304425 .. 1304454 +  -9.3  -3.36878   ATGGCAGGCGTGATG       CCGCCGAGCGCC ATATTCG GGCGCTCG-TGG       TTGTACGTCCATAGC  63 101
APY29_RS05825 1308638 .. 1308651 +  -3.7  -3.55907   GGGGTACCGAGGCCC               GCCGG CATC CCAGC                TTCTGAATTTTCTTG  53 50
APY29_RS05830 1309188 .. 1309198 +    -4  -4.11216   ACTCGTCGACCCGTC                 CATA CCT TATG                 TTTTGCCAATGCGCC  63 97
APY29_RS05835 1309616 .. 1309660 +    -3  -4.29396   TCGCCCCACAAGGCA TATCGAAGGCC--CGCAATG GGCAAGG CGTTGCTTTGGCCTTCGATG TTTTGGTGAGTGGTT  64 42
APY29_RS05840 1310220 .. 1310230 +  -6.8  -3.80014   TCCTGATTGCGCGTT                 GCTG GGA CAGC                 TTTACTCGTCGCTCT  62 35
APY29_RS05850 1313847 .. 1313874 + -21.4  -4.83169   TCGGGATGAACTTTT        GGCCCAAGTGCG GTGT CGCACTTGGGCC         TTTTTATGGACGGCT 100 127
APY29_RS05855 NONE
APY29_RS05860 1315183 .. 1315208 +  -8.3  -3.68222   TCATCCTGTCGTTCG         TGTTGTTGGGC TTCT GCCTGACAACG          TTGTTCGCCTTCGCC  69 106
APY29_RS05865 1316688 .. 1316720 +  -9.2  -2.52896   TTCGGCCTCGTAGAA     CGCATAGCCCA-CCGT GCA GCGGGTGGGC-GTGCG     TGCCTTGCGCGGTGG  54 284
APY29_RS05875 1318080 .. 1318100 + -10.3  -3.31144   CGGCCGCTACTCAGG            GCGGGGGGG TAA TCCCCCCAC            TTCTAGCGGTCGCCA  66 44
APY29_RS05885 1319842 .. 1319856 +  -2.8  -3.92694   TCAAAAGTGGGTCAA               CTAGTT GAA GGCTAG               TTTACTGTAATTTTA  56 243
APY29_RS05910 1328777 .. 1328800 +   -16  -3.65199   CAACTCCGTGATCGA          GAGGCCTCGC AAAT GCGGGGCCTC           TTTGCGTGAGGCATT  91 56
APY29_RS05915 NONE
        pilB 1331036 .. 1331083 + -10.4  -4.21676   TAACGAAGGACTAAG CGCCCTCATCCGGCCTTCGG ACCTCCTC CCGCGGGCGGGAGAAGGGCG TTTTGGCTACCTTCT  81 27
APY29_RS05925 1331487 .. 1331515 +  -3.9  -4.52589   CTTGGTGACCCGGAA       CAGCTTGGGGAC CCATAC GTTCC-AGGCTG        TTTTGTCTGGACAAC  69 33
APY29_RS05940 NONE
APY29_RS05945 NONE
APY29_RS05950 NONE
APY29_RS05955 NONE
APY29_RS05960 1340233 .. 1340243 +  -4.6  -4.07568   TCGAAGTTGAAGCCG                 GCCG CCT TGGC                 TTTTGCCAAAAACCA  62 465
APY29_RS05975 NONE
APY29_RS05980 NONE
APY29_RS05985 NONE
APY29_RS05990 1345108 .. 1345141 +  -9.4  -3.19371   TTCTTCCAGGCTGCG     CGCAGCGGCGGTGG CTTCTT CCACCAGCGCGGCG      TTGCGTTGGGTCACT  59 298
APY29_RS06000 1347719 .. 1347742 + -11.6   -3.5393   AGCTCATCGGCGCTG          CCTGCGGCCC GGCG GGGACGCGGG           TTTCCCAGACCTGCT  72 186
APY29_RS06030 NONE
APY29_RS06035 1359111 .. 1359124 +  -2.3  -3.47078   ACCATCGGCCGACCC               CCACG CTTC CTTGG                TTCTCATGTCGGCTC  47 144
APY29_RS06040 NONE
APY29_RS06045 1362088 .. 1362111 +  -9.5  -4.08767   GTAGGACTTCCCACA          CACAGCGGC GAGCCG GCCGCTGCG           TTTTCCGGAAATCGC  76 209
APY29_RS06050 1363099 .. 1363121 + -13.4  -2.73243   CTCTGACGCCAAAGC           CCGCACGCCA GAC TGCCGTGCGG           CTTTCGCACATAAGT  72 60
APY29_RS06065 NONE
APY29_RS06070 NONE
APY29_RS06075 NONE
APY29_RS06080 1370485 .. 1370537 +  -7.6  -3.68351   GCGTTGGAGTGCAGG CAGATGCAGGAGCCGCGGCCATGGCG CTG CGC-GTGGCCG-GGCCTGTGCAGCCG TTTCGATCCTACGCG  65 42
APY29_RS06085 NONE
        ssuB 1372360 .. 1372372 +  -4.7  -3.12351   CCCGCTTGGGTAGCG                TCGGC CTG GCCGC                TTCCATCTCCAGCAC  48 180
        clpB 1375227 .. 1375244 +  -6.9  -3.53444   GCGCCCCTGAGGTGA             CTGCCGG TTGG CCGGTGG              TTTAAACGGGAATCC  57 196
        btuB 1377488 .. 1377517 + -15.7  -2.75963   ATCCGCATGGACCAG       GCGGACACCGCGG TTGC TCGCGCTGTCCGC        GTTTCACCTGGCGAT  78 95
APY29_RS06105 NONE
APY29_RS06110 NONE
        cobO 1379493 .. 1379503 +  -2.4  -2.64616   AGCCGTGAGCGTGCG                 CGCG CAA CGCC                 TCGTATGGCTCGGCA  38 39
APY29_RS06120 NONE
APY29_RS06125 NONE
APY29_RS06130 NONE
APY29_RS06135 NONE
        cobT NONE
APY29_RS06145 NONE
APY29_RS06150 1385935 .. 1385954 +  -4.2  -3.24232   GCACGTCTGCTGCGT            GCGGTGGT ATGG ATCGCTGC             TCTGTTTCAAAGCCG  47 78
APY29_RS06155 1387502 .. 1387512 +  -8.2  -3.53811   AATCCACACCGAAGC                 CGCC ACC GGCG                 TTTACCCGCAGTGGG  65 513
APY29_RS06195 NONE
APY29_RS06200 NONE
APY29_RS06205 1400603 .. 1400619 + -10.1   -3.4252   CGGCCGCATGCGCCT              TGGCGAC GTG GTCGCCG              TTGTCGTCGATCACC  65 487
APY29_RS06220 1403746 .. 1403763 + -12.7  -2.94912   CCACAACGACAAACA             CCGCCGA TCAC TCGGCGG              TGTCTGCGTTCACGC  70 157
APY29_RS06240 1409905 .. 1409925 + -15.4  -2.80443   TGGCCGATACGCACA            CGCCCCGG GCTGG CCGGGGCG            TGTGGTCGACTCTCG  78 49
APY29_RS06250 NONE
APY29_RS06255 1415272 .. 1415302 + -11.9  -3.02511   TCCAAAGCGCCCTAA      GCGCGGCAGT-GCT GCTC AGCTGCTGCCGTGC       TGTTCGGCCAGTAGC  68 26
APY29_RS06265 1417189 .. 1417209 +    -4  -2.68881   TTTCCACGTTTCATT           CGCGT-GTG AATC CACGACGTG            CTTGCTGTTTCCTCT  42 58
APY29_RS06270 1417787 .. 1417818 +  -7.1  -3.48593   TGCGGCACCTAGCGT      CGACCGCGCACGC GTGGCG GAGGGCGCAGTCG       TTGTGTAAGCCGCTC  57 297
APY29_RS06295 1425032 .. 1425057 +  -4.5  -3.07816   GGAAGTCCCGACCCC         TGGCCCAGCCG CGCG CGGCGCGCCCA          TTCGCTGCCTCAACG  45 74
APY29_RS06305 1427771 .. 1427801 + -24.1  -3.14132   TGACCGGCCATCGAA       CGCACGGCCACGC CCATT GCGTGGCCGTGCG       TTCATGCGCAGCGAG 100 38
APY29_RS06310 NONE
APY29_RS06315 NONE
APY29_RS06320 1430358 .. 1430398 +  -3.3  -2.63631   GGAATCGAAATCGCC GCAT-CCTGCATCGCTCGG CAGCA TCGAGC-ATGCCGGTAGGC TGCTCTACCCATTCC  39 68
APY29_RS06325 NONE
APY29_RS06330 1431806 .. 1431822 +    -8  -2.95068   GTGACGTCAGTGCAG              GCACCT TCGAC AGGTGC              TGTCTCCCTATCTTC  53 159
APY29_RS06335 NONE
APY29_RS06340 NONE
APY29_RS06345 1435069 .. 1435079 +  -4.6  -4.08394   CGGGCATCGGCGAAC                 CGGG AGA CCTG                 TTTTGACGACGCTCT  63 9
        ybgC NONE
        tolQ 1436468 .. 1436479 +  -2.2  -3.04398   GGTGCACAGTGCCAC                GAGC AGGT GTTC                 CTTTTCGGGGCACCG  41 106
        tolR NONE
        tolA 1438147 .. 1438162 +  -4.7  -3.43338   CCTCATTCACGATTG              CGAGT ATGTTC ACTCG               TTGATTGCTATCCCT  53 148
        tolB NONE
         pal NONE
        ygbF 1440923 .. 1440962 +  -8.4  -2.91695   GTCTCGGCCAGCAAC  TGCGCTGAGCCTGCGCGT CTGT GCCTGTGGGCACGGCGCA   TACTTTGCCCATGAA  55 18
APY29_RS06385 1441783 .. 1441808 +  -5.4  -3.53012   GGCGCTACGCGATGA        CGTCGC-GGCGC ATCG GTGCCTGCG-CG         TTTGCAGGGCGACCG  53 152
APY29_RS06400 NONE
APY29_RS06405 1444592 .. 1444602 +  -4.6  -2.94099   GCGGTGAGATCGGTG                 GGCG TGG CGTC                 TATCTGCTGCCACGC  46 288
APY29_RS06415 1446457 .. 1446512 +  -5.3  -3.68222   CTGGAATGTGGCTGC GCCG-TTGCAACAGC-CAAGCGCGCCT CTCA GGGCGCGCTTGGGACGACGTGAGCGGC TTGTTGCGATTGCCG  58 250
APY29_RS06425 1449224 .. 1449269 +  -9.6  -3.14527   ACGCAACGTGCTGCC GCTTGCGCCATCGCGT-GCGC AAGCA GCGCGACGCGATGGCGATCAC TCTTGCTCAGGCTTC  61 125
APY29_RS06435 1450466 .. 1450495 + -10.1   -4.4634   GTGTGCAAATGTGCT       TAGTCGCGGCA-GC AAT GCATGCTGCGATTA       TTTCTTGTTGCGCTT  95 90
APY29_RS06460 1455372 .. 1455384 +  -9.1  -3.06796   GCCGGCGTCGTCGGC                GGTGC CCA GCACC                TTGCGTGCGGTGCGG  57 257
        hrpA 1460216 .. 1460247 + -13.6   -3.1552   GCCGATTCTGGGCAC      CGGCCGCGCCCACC CGGC GGTGAGCGCAGTCG       TGTTGCTGGCTACGC  76 196
        relA 1472776 .. 1472817 +  -9.3  -3.13073   CTGGGCGCCACTGCG CAGCCGCGC-GCTCTGGCGC ATG GTGCTGGCGCTGTGCGTCTG TCTGTTGCTCACCGT  61 268
APY29_RS06530 NONE
APY29_RS06535 1474940 .. 1474953 +  -2.3  -3.14132   ACGTGACCATGCAGC               TGCAC GCCG GGGCA                TTCGTCGGCCAACAA  42 380
        mrcB NONE
APY29_RS06550 1479917 .. 1479948 +  -8.6  -2.54896   AGACCGGCGATCGAA      GCGACTGCGCACCGC AAG GCGG-GCGCGGTGGA      TGCCTTGGATGGCCG  53 40
APY29_RS06555 NONE
        tsaB NONE
APY29_RS06565 1484150 .. 1484175 +  -4.6  -2.75481   CCACCTTGCCGCCTA         GCCGG-CGGCG GCGCG CGTCGTCCGGA         TAATTCAGGTTGCCC  43 329
APY29_RS06580 NONE
APY29_RS06585 1486737 .. 1486756 +  -6.4  -3.17763   GACGATCTGATCGCG            CGCATCAG ACAA TTGGTGCG             TTGATGCGCTCTCCA  53 2
APY29_RS06590 NONE
APY29_RS06595 NONE
APY29_RS06600 1496717 .. 1496736 +  -4.2  -3.73224   TCCGAGACCAATGGC            GCAATGGG AACT CCGGTTGC             TTTGCTGGGCCGTCC  56 33
APY29_RS06605 1497895 .. 1497916 +  -3.5  -2.65354   GGCGCTGGCACAGCG           TTGGCCGGC ATAA GCCGGGCGC            TCCCTTTCGAATCGG  39 13
APY29_RS06610 1498402 .. 1498433 +  -5.9  -2.66964   CGGCCAGGCGCTTGC     GGTCGCTGCCGTCTG AGAG CGGGCGGCA-C-ACC      TGCTGTGCTCGCTGC  46 10
APY29_RS06615 1499315 .. 1499329 +  -2.1  -3.51137   CGCAAGCACGATCTG              CGTTGG CCAG CCA-CG               TTATGTGAGCTGATT  47 53
APY29_RS06620 1499806 .. 1499816 +  -2.4  -2.52464   CTGACCTTGCATTCC                 GAGC GCT GCGC                 TGCCTTGCCGGGCCG  37 210
APY29_RS06635 NONE
APY29_RS06640 1502707 .. 1502721 +  -2.1   -4.4009   GGAAATGGGGATCCC               TGCTT TCTTC GAGCA               TTTTCTGCAATACCG  65 489
APY29_RS06660 1506358 .. 1506374 +  -7.9  -3.63569   CGCGCATTTGCGGCG              GCAGCAG CGT CTGCGGC              TTCTTGGCCGATTCG  63 115
APY29_RS06670 1510143 .. 1510166 +  -6.7  -3.63744   GGCCGTCGGCCATGC          GCGTGCCGTA ATTGA TGCGGC-CGC          TGTTTTCGACCAGGA  61 476
APY29_RS06690 NONE
APY29_RS06695 NONE
APY29_RS06700 1519349 .. 1519376 +  -3.3  -4.28651   CCGTGATAGGACTTG        GCTTCGTTGGT GGACCG GCCACCGCAGC         TTTTGGACTTTTGGT  64 242
APY29_RS06705 NONE
APY29_RS06710 1521464 .. 1521511 +  -8.3  -3.50853   TGCTGATAGTAGTTC GCTTCTGCTTCGGCCGGTGGG ATGTCG CCGATCGGGCCAAGCAGGCGC TTGTGGTTGAACCAG  62 108
APY29_RS06720 1524075 .. 1524103 + -20.3  -3.37796   CGCCCCATCATGCAA        CAGGCGCCGACTG AGA CAGCCGGCGCCTG        TTGTGCGTCATGCAA  95 117
APY29_RS06755 NONE
APY29_RS06770 NONE
        cysQ 1543945 .. 1543968 +    -8  -3.07344   GGTACACTCCGGTAT          CTCCGCACGC GCTT GCGTGCCGCG           TCTATTGCGGGGTGC  54 99
APY29_RS06780 NONE
APY29_RS06785 1545399 .. 1545431 +  -2.7  -3.73302   CATCATGTTCTCGCC     GCGTAGCGCCTG ACCGCGTTTG CAGGAGC-ACGC      TTGTTGGCTGTCTTA  52 13
APY29_RS06790 NONE
APY29_RS06795 1546867 .. 1546893 +   -18  -3.14132   CCGCCTGAGCATTGT         TGCAGCGCGGCG TAG CGTCGCGCTGCG         TTACTGCCCGCAGGC  91 522
        gcvT NONE
        gcvH 1548670 .. 1548690 + -16.9  -5.75342   GACGCCGGCATCCGA            TGGCCGCTC ATA GAGCGGCCA            TTTTTTTTGAGCACG 100 53
APY29_RS06815 1550147 .. 1550178 + -15.2  -5.38047   CGCCGTAAACATCGA      GCTCTCTCCCCG ACGCCCAG CGGGGAGGGAGC       TTTTTTATGTGCCTG 100 57
APY29_RS06825 1553884 .. 1553896 +  -4.8  -3.39327   CTTGGCATCGACCAC                GCAG ACGGA CTGC                TTCTCACTCTGGCAG  50 78
APY29_RS06830 1554634 .. 1554659 + -21.9  -3.17146   CATCTCCACAAACAA         CCACGGCGGGC CGAA GCCCGCCGTGG          TCTATTCTCGCCCCA 100 294
APY29_RS06845 1558931 .. 1558945 +  -7.8  -3.27923   CTTGGATCGATTGGC               CAGGCG TCC CGTCTG               TTGCTCGTGTTCGCG  58 142
APY29_RS06850 1559596 .. 1559618 +   -12  -2.84919   CAGGCGTGATGCCGC           CGAGCGCC ATATTCG GGCGCTCG           TGGTTGTACGTCCAT  67 105
APY29_RS06860 1561105 .. 1561115 +  -2.4  -3.66643   GGCCGTTGAACGATT                 CGAC GTA GGCG                 TTCTGGTTTGGTTTG  51 236
APY29_RS06870 1563490 .. 1563507 + -12.7  -5.06414   GTTAGACAAAAAAAA             CAGCCCC AAAC GGGGCTG              TTTTTCTTGGGGCGG 100 343
APY29_RS06890 NONE
APY29_RS06895 NONE
APY29_RS06900 1570991 .. 1571001 +  -3.2  -3.63991   GGCGCAGCAGCAGAT                 CGAG TGT TTCG                 TTCTTGAGGCTGATG  53 271
APY29_RS06925 NONE
        metB 1578735 .. 1578768 +  -5.1  -3.14132   TTCGCGCCGCGCTCC     GGTC-GCTGCAGTGAC GCC GACGCCGCGGCTGGCC     TTGCTGGGGACCGGC  48 57
APY29_RS06935 1579797 .. 1579811 +  -2.1  -2.53876   CGGCTGATGACGCGA              CC-GAG CTGA CTCCGG               TGCGTTGCCGTGCGC  37 34
APY29_RS06940 1580511 .. 1580530 +  -7.2  -3.40403   ACTTCTTGATTCGTT            CGAAGCTGA TGT TCAGCT-CG            TTGTCGTACCACGCG  56 487
APY29_RS06955 1583549 .. 1583570 +  -5.1  -3.29144   ATCGGCAGCGTATTG           GTTGCCGCCC AGG GCGCGG-AAC           TTGTCGGCGCGGTAG  51 428
APY29_RS06975 NONE
APY29_RS06980 1589884 .. 1589904 +  -3.1  -2.62616   ATCGCATCGCGTAAA            GACGGTCGT AAG ACGCCTGCC            TGCTGTAACCGATCA  39 89
APY29_RS06985 1593642 .. 1593658 +  -5.8  -3.10796   ACGTGCAGGTGTCAG             GC-GGCG CGTT CGCCCGC              TGTTGGGTGCTCGAA  49 72
APY29_RS06990 1597575 .. 1597605 + -11.9  -2.71681   GGCGCTGCGCTGGCG      CGCGG-CGCTG-GTC GAT GGCGCAGCGGCCGCG      TCATTCGGCGACTTC  66 70
        pdxH 1603281 .. 1603318 +  -7.5    -3.794   GTATCCGTGAGGCAG   CCGCCCG-GCATGGGGCG ACA CGCCAGCTGAACGGGCGG   TTTGCTCGCTTGCCG  65 31
APY29_RS07025 NONE
APY29_RS07030 NONE
APY29_RS07035 1605746 .. 1605770 +  -2.8  -2.75708   CCGCTTCCCTTCCCC          CATCGCCACA AGGTG TCTGACGATG          AGTTTTTTCAGCAAG  40 6
APY29_RS07040 1606439 .. 1606452 +  -3.7  -3.02043   TCTGGATATCACCTG               AGCGC ACGC GCGCG                TCTTCCACCCACCTT  45 25
APY29_RS07045 NONE
APY29_RS07050 NONE
APY29_RS07055 1608653 .. 1608670 +  -9.1  -2.82193   CCGGCCGAAGGTACA             TCGCCAC CGAG GTGGCGG              TGTCATGCGTGTGAT  57 44
APY29_RS07060 1609326 .. 1609339 +  -3.8  -3.09933   AACGCTAAGGTGGCC               GCCA CCGCGA TGGC                TTCGCTCAGTTGCAA  45 254
        soxR 1612481 .. 1612499 +  -8.8  -2.81133   GGGTTGGTGGACCGG             CGCGGAGA CGG TCTGCGCG             TGTGATGCGTGGCTG  54 94
APY29_RS07085 1615101 .. 1615111 +  -8.2  -2.90212   AAGTGGCGCGTAACC                 GCCG CCA CGGC                 TATATGCGCTCCTAC  54 444
APY29_RS07095 1615579 .. 1615590 +  -7.2  -4.07618   AGCGGCATCATCGCA                GGGC AAGT GCCC                 TTTCCTTATTCGCCG  70 80
APY29_RS07100 1616658 .. 1616670 +  -4.1  -4.17316   TTCCGGCTGCTCTTA                GCTAA CTT TTGGC                TTGTTTTACACGAAT  63 252
APY29_RS07110 NONE
APY29_RS07115 1620861 .. 1620876 +  -4.6  -5.03715   TGTTGCTGCCCTGCG              GCTTGC CGGC GCACGC               TTTTTTGGCAATGCT  83 234
APY29_RS07120 NONE
APY29_RS07125 NONE
APY29_RS07130 1624418 .. 1624463 + -12.6  -2.57132   GTGGGCGCCGATACC GCGTTACGC-GCTTGCCCAGGCG GCC CGCCTGGGCC-GCAGCGC-ACGC CTTGTCGCGACGCGG  67 91
APY29_RS07145 1626501 .. 1626513 + -10.5  -3.14344   AACATCGCCTGCCAC                GCGGC TTG GCCGC                TTACTGGCCGAAGTA  64 187
APY29_RS07165 1629966 .. 1629997 + -10.1  -3.02144   GTGGGCCAGGAGTAA      GCCGGCACAACAG ACGGTG CTGCTGTGGCGGC       TATTCCAGCGCGTCG  62 347
APY29_RS07180 1632353 .. 1632384 + -23.8  -3.57144   CATTATTCGAGCGTG      CCTGCGTCGCTGCG GTAC CGCGGCGACGCAGG       TTTCGCAGTGGCAGA 100 42
APY29_RS07185 NONE
APY29_RS07190 1633782 .. 1633823 + -10.3  -2.52676   CTGCGATAGATGCCC TGCAGCGTCGTATGCTTGC ATCGAG GCAAGCG--CGGCGCTGCA TGCGTTCCGCGCATC  59 148
APY29_RS07200 1635409 .. 1635419 +  -2.4  -3.66643   GGCCGTTGAACGATT                 CGAC GTA GGCG                 TTCTGGTTTGGTTTG  51 255
APY29_RS07210 1636880 .. 1636925 +  -8.3  -4.15044   CCCGTTGCTCTTGGC CGCATCAAAGCACATCTCCGGA TTG TTCGGGGATGTGCCTTGCC-CG TTTCTTGAAGACGAA  72 180
APY29_RS07220 1638634 .. 1638647 +  -6.7  -3.37761   GGGAATTGCCCTCGT               CGTTG CTGG CAACG                TTGATGTGTTCCGGT  55 136
APY29_RS07225 1640627 .. 1640659 +  -3.3  -3.43042   GATGCAGTGCATCCC      GGTGATCGACCTGCG AGC TGCACGTCGACGATC      ATTTTTCCTGGAGGG  49 320
APY29_RS07230 NONE
        cydB NONE
APY29_RS07240 1643277 .. 1643313 +  -7.2  -2.72463   CGGCACGCGGGCGCA   GTGCCGGCG-TGGCGCT GCAC ACCGTCAGCGCAGGCGC    TGCTTGAACATCCAT  52 69
APY29_RS07255 1646035 .. 1646048 +  -3.8  -4.67011   AGCAACCCCTGCGCA               TGGC CAGTCA GCCA                TTTTTCGATGCCCTT  72 299
APY29_RS07325 1656939 .. 1656955 +  -4.4  -3.05463   CTCGGCCGGCGTCGT             CCAC-GC TCAC GCAGTGG              TTGCGTCCAGCGCGT  45 114
        murA NONE
APY29_RS07335 1658745 .. 1658767 + -19.2  -3.14132   GCCGATTGAAACGAA           GAGCCCGGCT CGC AGCCGGGCTC           TTCGTCGCCGCCGCA  93 76
APY29_RS07370 NONE
APY29_RS07375 NONE
APY29_RS07380 1666546 .. 1666556 +  -6.8  -3.15544   TCAGTGCACCGACAG                 GCGA CGT TCGC                 TTGCTACACATCGCC  53 190
APY29_RS07405 1671635 .. 1671668 +  -7.5  -5.10154   ACAAGGACGTGGAAT    CGCCCGGTGTTGCAC TTGGAT GTGCAGC-C-GGGCG     TTTTTCGTTTTGGGT  93 127
APY29_RS07410 1672706 .. 1672716 +  -4.6  -4.65838   GATCCGGGTGAGCCC                 GGTC TAG GGCC                 TTTTTCACGTATCTG  74 19
APY29_RS07415 1673851 .. 1673883 + -15.6  -3.04792   TCTTGGTCGATCCAA     TGACGCAGGCGGTCG GCGG CGGCCGCCTGCG-CG      TGTTGGACGTAATGC  77 344
APY29_RS07495 1689853 .. 1689868 +  -8.2  -4.02132   CACATCGGTTCACGG              GTGCGC AACG GCGCGC               TTTCTAGGTTTGGGC  73 75
APY29_RS07500 1690485 .. 1690508 + -17.4  -3.71378   AGCTCGAAACAAGAA          GGCCCGGCGC AGGT GCGTCGGGCC           TTTCCATCTGGAGTG 100 61
APY29_RS07540 NONE
APY29_RS07545 1698596 .. 1698618 +    -9  -3.63627   CGCCCCGGTCACGCA           CCGACCTGGC GAG GCCAGCCCGG           TTTCAGATGTAACCG  68 390
APY29_RS07550 1699687 .. 1699699 + -10.5  -3.53444   AATAACAGTACACAT                CGCGC ATT GCGCG                TTTGCGGGCGCGTGC  67 313
APY29_RS07565 1701364 .. 1701375 +  -2.2  -4.07885   CGAACGGCTAGAATG                C-GGC CAT GCCTG                TTTTGCCCACGCCTC  57 30
APY29_RS07570 NONE
APY29_RS07575 NONE
APY29_RS07580 1703399 .. 1703429 + -13.3  -2.90685   GCCCAGGAGCGGCAA       CGCGACCGCGC AACCAACGC GCGCGGTCGTG       TCTGATGTGTGATTG  70 68
APY29_RS07585 1704209 .. 1704230 +  -6.5  -2.82015   GTGCGGTTTCACTGG           CGCAGGCCGA GGA TCGGCA-GCG           TGTCCTCCCTATGAA  49 132
APY29_RS07590 1704904 .. 1704929 + -19.1  -3.36823   GCATCGTGCTGAAAA         GAACGCTGCGG GCAA CCGCAGCGTTC          TTGCGTTTTGCGGAG  93 75
        lysA NONE
APY29_RS07610 NONE
APY29_RS07615 NONE
APY29_RS07620 NONE
APY29_RS07625 1713085 .. 1713116 +  -6.4  -2.78384   GGACCGACGACCTGC      CGCCACCGTTGCCG GCAG CGGCGACGATGACC       TCTCCTGCACGGCGC  49 139
APY29_RS07630 1714200 .. 1714241 + -19.3  -3.54307   CGACCGCGTAGCGCG CCAGGCCGCGCAGCGCCGC CACG GCAGCGCTGTGCGGCAGGG  TTTCCAGAGCCTGTT 100 254
APY29_RS07640 1716009 .. 1716027 + -13.1  -3.45054   TGTGTCATCCACGAG             GGCCCGC ATTGC GCGGGCC             TTCTGCGTTATGGCA  76 55
APY29_RS07650 1719055 .. 1719092 +  -8.3  -3.24021   GATCCAGCCCGCGGC   ACCGAGCGTCGGTGATGC TCC GCA-CGCCGACGCGCGAA   TTCACTATTTCGACG  58 39
APY29_RS07655 NONE
APY29_RS07660 1721044 .. 1721059 +  -3.2  -2.64794   CTTGACCGCGATCTT              GGCC GACACGAG GGCC               TGATATGAAATTCGA  39 7
APY29_RS07665 1723262 .. 1723277 + -11.8  -2.71364   CCTGCCCGAGATGCT              GCGCGC GTGA GCGCGC               TCGTTGCCCCCGTCA  66 16
APY29_RS07670 1724472 .. 1724484 +  -3.3  -3.17194   ACAGTTGGCGCTCTA                GGCTG CAG CGGTC                TTCCATTCAAGCAGT  44 228
APY29_RS07675 1725784 .. 1725806 +  -3.3  -3.11634   CATAAAAGAACATCC           TGGCTATGC CGGAC GCGGGGCCA           TTGGCTACTCTCCCG  44 525
APY29_RS07680 1726162 .. 1726178 +  -2.9   -3.4582   GGCGCTACGGCTGAG              GCCGT AAGGAAC GCGGC              TGTTTGATGCAGTAC  49 27
APY29_RS07690 1727641 .. 1727660 +  -8.6  -3.03441   TCGCGCTGCGTGCAA            TCG-CCAGC GCG GCTGGGCGA            TCTTGGGCGATGCTC  57 88
APY29_RS07705 1730904 .. 1730915 +  -5.8  -3.71888   GACACATAGTGGATC                CGTC CATG GACG                 TTCTTGCGTGTCATT  60 88
APY29_RS07710 1731604 .. 1731625 + -15.9  -3.07043   CACATCAACGCAACA           GGGCGCGAT TCGC ATCGCGCCC            TGTTGCGGTCCTACC  81 61
APY29_RS07725 NONE
APY29_RS07730 1735860 .. 1735892 + -15.6  -2.73875   TCGTCAGACGAATGT     CTGCAGCGCGCCGGG TAGA CCCG-CGCGCTGCAA      TGCTGTTGCAGCAGC  78 357
APY29_RS07745 1738878 .. 1738932 +   -10  -2.78463   ATCAAGGGATTGCAG CG-CGGT-TTGCTGCGCAGCGCCCAG CCGAT CTGCGCGCCGCCCAGCAGGATCGGCG TGTGGTCGCCGCGCT  57 273
        gpmA 1740282 .. 1740311 + -12.1  -3.61398   CGCCGCTGGCGCTTG       C-AGCGCTGCGTGC GGT GCGCGCAGCGCGAG       TTCTTGCGCGGCACG  75 42
APY29_RS07760 1740932 .. 1740948 +  -3.6  -5.08824   TCTTCGCCAGCGCTT              GCCGAC CGGAT GTCGAC              TTTTTTCGATCGCGC  78 285
APY29_RS07765 1743166 .. 1743188 +  -6.2  -2.88822   CCACCACCTTCGCCG           TGTGCGGCAC GCG GTGCTGCAAG           TCCTTGTGTCCACGA  48 104
APY29_RS07770 1745261 .. 1745277 + -10.1  -3.53012   CTGCGCCACCGTGCG              TGCGCCG GCC TGGCGCA              TTTCCAGCAGGCCGG  67 411
APY29_RS07815 1754744 .. 1754762 +    -3  -3.18383   TCCCCGCCATCTCAA             GCGAACCA CTT TGCTACGC             TTGATCGATAAGCAT  44 63
APY29_RS07820 1755644 .. 1755656 +  -3.4  -3.31263   CGCCACACCGGGGGA                GAAC GAGAA GTTC                TTATACGGATGGAAT  46 249
APY29_RS07825 NONE
APY29_RS07830 1760163 .. 1760179 +  -9.4  -2.75064   GCAGTTGCGGCTTAC              GCGGCA TGCGC TGCCGC              TGGTTGCATGCGCAG  57 51
APY29_RS07850 1766787 .. 1766814 +   -12  -3.16564   CCTTGGCTACGCGCT        GGAAGTGTAGGC ATGC GCCGGCACTTCC         TTGGTGAACTGAGCG  70 16
APY29_RS07855 NONE
APY29_RS07860 1768664 .. 1768687 +  -4.6  -3.54424   CTTGACGTCGTAATC          GACCTGAT TCTTGGTT GTCAGGTC           TTTAAAGCCCTGGCG  52 199
APY29_RS07870 NONE
APY29_RS07875 NONE
APY29_RS07880 1772169 .. 1772179 +  -3.2  -3.05463   AGGCTGCAAGGTCGC                 TGCA CCA TGCG                 TTCGCTGGCCGGCCT  43 82
APY29_RS07885 NONE
APY29_RS07890 1774272 .. 1774284 +  -6.2  -4.07885   TGCGCAAGGTAAAAT                CGGG CGACT CCCG                TTTTGCCGAGCGCTC  65 65
APY29_RS07895 NONE
APY29_RS07900 1776233 .. 1776257 + -15.8   -3.5393   GGAGTAATCGGCTGC          CAGGTCGTGC GTAGA GCACGACCTG          TTTCAAGGCGCTCGT  86 34
APY29_RS07910 NONE
APY29_RS07915 NONE
APY29_RS07920 NONE
APY29_RS07925 1784001 .. 1784019 +  -5.2  -3.88232   CGGACTATCGTGGCG             CATCGGTG CTG CAGCGGTG             TTGTTGTCTGCGGCG  60 187
APY29_RS07930 1785069 .. 1785101 + -11.2  -2.87564   AACGTCAGCGGTCAT     GCCTG-CCGCACGCG TCAT CGCGCCCGGGCAGGC      TCTGTACGAGCGTGG  64 39
APY29_RS07940 1787063 .. 1787080 + -11.3  -2.81464   AGGTGGAGCGGCTCA             TCGCCGA GAGA TCGGCGA              TCTGCTCGATGCTGA  61 400
APY29_RS07950 1788421 .. 1788461 + -11.8  -2.88579   CCATCCGCACGGCAA CCG-CCGCTGCCGCCCG GTCCCATG CGCGCGGCAGCGGGCGC  TATGTCGCCAGTTCC  67 307
APY29_RS07960 1790752 .. 1790765 +  -2.3   -3.2794   ACGCTGGCGCAGTGC               GGGTC AGGC GGCTC                TTGATGTGCATCGAC  45 66
APY29_RS07965 1792250 .. 1792287 + -10.3  -2.62983   GGTCGCCGATGGTTC   GCTGCGCGTGGTGCGCG CGAC CGCGTCCGCCGCGCCGC    TGGTGTCGAGATAGA  57 389
APY29_RS08000 NONE
APY29_RS08005 1803278 .. 1803304 +  -8.6  -3.05384   GCTACGTTTTGTTAG         CCGCTCTAAGCC TCT GTCGTAGGGCGG         TTGCGTCGCCGCCAC  57 24
APY29_RS08010 1803796 .. 1803813 + -14.1  -4.93365   TTCGCGACACCGGAA             CGCGGCG CTTG CGCCGCG              TTTTTCGTTGTGCAG 100 52
APY29_RS08040 NONE
APY29_RS08045 1811961 .. 1811994 + -10.3  -2.64155   GCATGACGCGCTCTA     GACTGCGCTACCCACT AAA GGTGGGTGGCGCC-TC     TCCCTTTCCACCCGA  59 357
APY29_RS08050 NONE
APY29_RS08055 1813064 .. 1813089 +  -6.9  -3.14564   ATTGCATCGATGGCC         G-CCTGCGTATC GCC GGTATGCAGGGC         TTGCTCCAGCAGTGG  52 95
APY29_RS08080 1817040 .. 1817054 + -12.8  -3.21912   ATAGCCATACAGACT               CGGCCG TTG CGGCCG               TTACTGCCTTCAGGC  73 209
APY29_RS08085 1819589 .. 1819599 +  -3.2  -4.69053   ACATGCCTCTGGCGG                 CTGC ACG GTAG                 TTTTGTTGGCTGCTC  73 91
APY29_RS08090 1820451 .. 1820478 +  -5.4  -3.54129   AGTGCCGTGCTGCCG        CGCCCAACG-GGC AAC GCCGTGCCGGGCG        TTTGCGCCCGCTCTA  55 118
APY29_RS08095 1821803 .. 1821834 +  -7.2  -2.73875   GCTTGAACATCGGCG      TGCTTCAACGCAGC GGTC GCTGTGGAGAAGCG       TGGTCTTGCAGCGCC  52 136
APY29_RS08115 NONE
APY29_RS08120 1826841 .. 1826870 +  -4.3  -4.11371   CCGCACGCTATCGAA       GTGCGGCAGCTC CGGTTAC GATCTGC-GCAC       TTTTCAGGGATGTTG  63 118
APY29_RS08125 1828172 .. 1828191 +   -15  -3.06183   TGATCGGTTGCGCAA            CTGCCCGC AGGT GCGGGCAG             TTGCGTCGGCGTGCG  78 38
APY29_RS08140 1831692 .. 1831705 +  -3.1  -2.75382   TCCGACGGAGACCTT               CGATG AACG TATCG                TCCTTCAATCGCCTG  40 43
APY29_RS08145 NONE
APY29_RS08150 NONE
APY29_RS08155 1836781 .. 1836814 +  -7.3  -4.44245   ACATCCCGACCCGGG     CACCGGCCGCGCCCGC CTG GCGGTTGCG-CTGTTG     TTTTATCGCTGATCT  81 118
APY29_RS08165 1837518 .. 1837535 +  -2.5  -3.50808   TGCCTCATGGGCGAA             GGCGCTG CAAA CCTCGCC              TCTTGTTCTCCTCGC  47 51
APY29_RS08170 1839728 .. 1839738 +  -8.2  -3.01125   CCGCACCCTCATCCG                 CCCC TGC GGGG                 TACTTTCTCCCCCAT  57 257
APY29_RS08180 NONE
APY29_RS08185 1843126 .. 1843180 +  -6.8  -3.52652   ACGTCGGCGCCGGAT GTCCTGAGGCACCGCAGCTGCGCGGC CCT GCCGTGCAGCTGCGGGAAAGTCCGAC TTGTCATTGCATGCG  57 19
APY29_RS08210 1846195 .. 1846210 +  -8.2  -3.31792   ATTGCACAGGTCGAT              GTGCCC GGCC GGGCGC               TTGTAGAAATCGTCC  58 144
APY29_RS08235 1850994 .. 1851025 +  -5.1  -2.85351   CCTCAGCCATCAGTC      GCAGGATCTGCGC CGCGCT GTGTGGATGCTGC       TGTCATCTGAAGCCA  46 57
APY29_RS08240 1852113 .. 1852137 +  -6.9  -3.26596   CGCCTTTGCAGAAGC          TCGCCGGGGCC CTT GGACACGGCGC          TTGGCTTGCTTTGGC  55 122
APY29_RS08245 1852533 .. 1852572 +    -8  -3.58726   ACTGAGGCCCGTAGC GCCTGCGTCAGCTCGGCGT TCTGC ATGCCG-GC--ACGCAGGC TTGTCTCTGCGCAAC  62 107
APY29_RS08255 1853726 .. 1853767 +    -3   -3.5393   CATCGATCAGGCTAC GGC-GCGGCAGG-TTGT-CGT CGA ACGTGCGGTCCTGCCGCAGCA TTTCCAGGAACTGCT  49 233
APY29_RS08265 1855345 .. 1855361 + -12.3  -3.53012   TCCACCTGCTGCACT              GCGGTAC CCT GTACCGC              TTTGCACCGCCCGAG  74 49
APY29_RS08270 1858478 .. 1858491 +  -8.1   -4.8622   CATCCGTTTCACTGG               CGCGT GGCG ACGCG                TTTTTCATTCCGGGG  90 472
APY29_RS08275 1859255 .. 1859265 +  -8.2  -3.62096   GTCGGGCAATTAAGC                 CGCG CCC CGCG                 TTTCCGGTCATGGAA  65 28
APY29_RS08280 NONE
APY29_RS08285 1861180 .. 1861192 + -10.5  -2.90075   CCTGAACACGCGTCC                GGCCG GAC CGGCC                TATAATTCACGCCAA  61 36
        rsfS 1861678 .. 1861695 + -14.1  -3.60151   GTGCAGAGTCAACAA             CGGCGCC CTTG GGCGCCG              TTATCGTTTGGGACG  81 64
APY29_RS08300 1863951 .. 1864003 + -12.1  -2.52464   CGAAACGTGTGTGCA GCGCCATATCG-ATGCGGCGG-CTGC GGTT GCAGGCCGCCGCATCCGGTC-GCCGC TCAATTCAGCGAGAA  65 51
APY29_RS08320 NONE
APY29_RS08325 1871483 .. 1871516 + -14.5  -3.27923   ACTTCAACTTCGTTG     CGCAGGCGGGCGGCT AACC GGTCGTGCGCCTGCG      TTGGTGCTCTTACGA  82 112
APY29_RS08330 1875693 .. 1875709 +  -3.6  -3.14344   AAGCGCGTGCGGCTC              CGCGTC CAGTC GGCGTG              TTGCTGCGCCAGCTG  45 225
APY29_RS08340 1877927 .. 1877951 + -14.3  -2.57244   TCGGGATTTGGGATT          GGCAACGGCTG GGA TGGCCGTTGCC          TCGATTGATGGATCG  74 146
APY29_RS08350 1880172 .. 1880209 + -13.3  -3.28712   CTGACGGTGCATGCG   CGTGGGGCCGAAGCGGG CAGT CACGGTTCGCCCCCGCG    TTCTCGGACGCGCGA  74 125
APY29_RS08355 1880876 .. 1880905 + -22.3  -2.62396   GTGCAGTGGAAACAA       CAAAGGCCCGGCA GCGA TGCCGGGCCTTTG        TCGTGTCAGGCGATG 100 44
APY29_RS08385 1886801 .. 1886839 +  -5.9  -3.73107   ATGCCGCGCTGCCGG  GGC-CGGTGGCCCAGATG CCGA CATCTTCGCCGCCGTGGC   TTTCGGATTTGGTCG  59 188
APY29_RS08395 1889810 .. 1889820 +  -6.8  -3.18264   GCGCCAAACCACTGC                 GCTG AGG CAGC                 TTGATGCGTGCCGGA  53 21
APY29_RS08400 1890826 .. 1890845 +  -7.8  -3.53811   GACCGGTACGGCAAT            CGCGTCGT GGGT ACGACGAG             TTTCACCCACATGGC  62 191
APY29_RS08405 1891542 .. 1891564 + -10.5  -3.06492   TTCCGCGCAACAAAA           AGGCCGCGA GATCG TCGCGGCCC           TCTTCGAATGAGTCG  62 181
APY29_RS08420 1893750 .. 1893772 + -17.7  -3.80625   GATTGCTGTTCCTGA           CGGCCCGCC CCATC GGCGGGCCG           TTTGCATTCTGCGGC 100 191
APY29_RS08425 1895040 .. 1895088 +  -7.9  -2.67694   GGTGCCGCCGATGTG GCGTGGC-GCCGGGCGCGCCGG GTAGCG CCTGCATGCACGGCAGCCGCGA TGATGTGCTGGTGAT  51 1
APY29_RS08430 NONE
APY29_RS08435 1898068 .. 1898090 + -19.2  -2.76162   GTACCCTCACCCCAA           CCCCTCTCCC GGA GGGAGAGGGG           CTTTAGCCTCCCCTC  87 404
APY29_RS08440 NONE
APY29_RS08445 1899477 .. 1899495 +   -16  -5.28481   CCACAGACAAAGAAA             GAGCGCGG GAT CCGCGCTC             TTTTTTGATTGCCTA 100 198
APY29_RS08470 1908624 .. 1908640 +  -5.7  -3.40403   GTACATTGAAGACCT              GTAGGCC AAC GGCCAGC              TTGTGGTCGGCAAAC  53 295
APY29_RS08485 1916116 .. 1916140 +  -9.2   -3.1855   AGAATTCGCCGTCTT         CGC-GCGGGCC GCTC GGCCCGCCGCC          TTCCGTCTTCAAGGA  61 75
APY29_RS08495 1916875 .. 1916905 + -14.7  -2.58544   TCCTGGTGCAATGGC       GCGGCCGTGACCT TCAGC AGGTCGCGGCAGC       CTTCTGGCGGTAGCG  74 168
APY29_RS08530 1923184 .. 1923196 +  -6.2  -3.19642   GAAGTTCGGCAATAG                CCGC CCTAA GCGG                TTCGTAAATCATCAT  51 445
APY29_RS08550 1928071 .. 1928098 +  -2.1  -3.88498   TGGACTGTTCGGTAG        GT-TTGAGTCTC CGATA GAGACTCAACAG        TTTGGTCTCTCGCGC  54 283
APY29_RS08560 1930332 .. 1930357 +  -2.5  -4.56597   TGCCGGCCGGCAAGT         GTGCGTCGA ATTCGTCG TCCACGCGC          TTTTTCAGCAGGGCG  67 406
APY29_RS08570 1932813 .. 1932835 +  -3.3  -4.25104   GCGCTTCGCGCTGCA           GCGCGAGCG CACGC CGTTCCTGC           TTTTCCTGCAACAGG  64 483
APY29_RS08585 1934959 .. 1934998 +  -8.4  -3.65812   GAAGCCGCTGTCGTG  CGCGTCGTCGTCTGCGCG AGTG CGGGCAGGTGGTGCTGCG   TTGTGTTCGGCCACC  65 247
APY29_RS08600 1938216 .. 1938273 +  -9.9  -4.72272   GTCGCACCCTCTAGA CGGCGGT-GCGCATC-GGCCTGCACCCAC TGGC GTGGG--CAGGCCAGCCGCGCGAACGCCG TTTTTGCTAGCCCGG 100 69
APY29_RS08605 1939764 .. 1939778 +  -2.7  -4.54449   CGGCCGCGACGAAGC               CGTGC AAATA GCCCG               TTTTATGTCGGATGT  68 168
APY29_RS08620 1942391 .. 1942425 +  -2.1  -3.12327   GCCGCGCAGCGATGA    GCCTGCGCGCATGAGT GCCA ATTCGTTCG-GCAAGC     TGTTCACTGTCACCA  43 26
APY29_RS08625 NONE
APY29_RS08630 1944610 .. 1944620 +  -4.6  -3.33037   GGTTCCCCGAACCCA                 GCGC GCA GTGC                 TTCCTCATTTCCCCT  50 65
APY29_RS08635 NONE
APY29_RS08640 1945814 .. 1945854 +  -2.4  -3.53224   TGTTGGCGTTCTGGA CCGCCGTGCACGTGCTGGA GCGT TCCGGCGCGCG-ACGATGC  TTTCCAAAGAGGCTC  47 33
APY29_RS08645 NONE
APY29_RS08650 NONE
APY29_RS08655 NONE
APY29_RS08660 1950397 .. 1950415 +  -4.5  -4.07568   ATGGCCGAAGAGGTG             TGCTGGT CTGTC GCCAGCG             TTTTACCCAGCCAGC  62 239
        trpB 1952591 .. 1952607 +  -3.6  -3.57144   GCACACCATCGCGGC              GCGCGA GGGGA TCGCTC              TTTAGGAGTGGCGGC  51 4
APY29_RS08675 NONE
APY29_RS08680 1953973 .. 1954007 +  -6.9  -2.52464   CGCCGCATCGCGCCA     CGGCAGCCGCCGCGA TCCAT TCGCGGCCACGGCCA     TCGCTTGCAGGGACA  48 111
APY29_RS08685 NONE
APY29_RS08690 1956412 .. 1956439 +  -3.2  -4.72127   GATCGTCATTGGCAT        CTGCGTGGCCAT CGCC AAGGCCGCGACG         TTTTATCTGTTGTAT  73 44
APY29_RS08695 1957479 .. 1957525 +    -4  -2.62244   GTCGGGACGCATTGC GCGGCGCCAATAGCCGCGCCCG CAA CACGACCGGTGACCGGCGCCGC AATTTTGTTCAGAAA  41 49
APY29_RS08700 NONE
APY29_RS08705 NONE
APY29_RS08710 NONE
APY29_RS08715 1962265 .. 1962289 +   -10  -2.52464   TCAGGCGTAGGGCGA         GCGCATGCGGC AACA GCCGCA-GTGC          TGCGTTGACCAGCCG  56 282
APY29_RS08725 1963895 .. 1963906 +  -5.8  -3.58522   ACCCATTAAGTTTTG                TCCG GGGA CGGA                 TTTCGAAATGCTGAT  57 40
APY29_RS08730 NONE
APY29_RS08735 NONE
APY29_RS08740 NONE
APY29_RS08745 NONE
APY29_RS08750 NONE
APY29_RS08755 NONE
APY29_RS08760 NONE
APY29_RS08765 NONE
        nuoG NONE
APY29_RS08775 NONE
APY29_RS08780 NONE
APY29_RS08785 NONE
APY29_RS08790 NONE
APY29_RS08795 NONE
APY29_RS08800 NONE
APY29_RS08805 1979490 .. 1979502 +  -4.9  -2.85161   GGCATCGCACTGAAA                TAAAC CGT GTTTA                CTGTTTCGTTTTTGT  46 86
APY29_RS08810 1979807 .. 1979829 + -19.2  -5.00616   CGGGCTTTTTTCACG           CAAGGGGCCC ATC GGGCCCCTTG           TTTTTTCCGGAACCG 100 128
APY29_RS08815 NONE
        nusA NONE
APY29_RS08825 1984840 .. 1984862 + -16.2  -4.91473   GCAGGTTCTGCAAGG           CGAGGGCGGC ATG GCCGCCCGCG           TTTGTTTTTGGCTTC 100 89
APY29_RS08830 1985355 .. 1985369 +  -9.2  -2.70932   GCCCTGATTCCCGCA               GGCGCG CAC TGCGCC               TGATTCGAGCACCGA  57 71
APY29_RS08835 1986424 .. 1986436 +  -9.1  -2.55351   ACGGCGAGTCCGACG                GTGCG TCA CGCAC                GTTCCTGTCGACCAC  56 134
APY29_RS08840 1986746 .. 1986769 + -19.6  -5.13722   AATCGAGTCCTACCG          CCGCGGCGCA GCGA TGCGCCGCGG           TTTTGTTTTGGTCAA 100 39
         pnp 1989058 .. 1989073 + -11.8  -5.60689   ATGCATGACGAAAGA              GCGGGC TTGG GCCCGC               TTTTTTGTTGTGTGG 100 68
        purE NONE
APY29_RS08870 1993231 .. 1993254 +    -6  -2.87132   CGCAGCATGTCGGTG          GC-CATGACGT GCG ACGTCACGCGC          TGTCTGCGAGGCAAG  48 45
        grxD NONE
APY29_RS08885 NONE
APY29_RS08890 1995717 .. 1995731 +  -7.8  -3.14026   GATCTAGCGCAGCTC               TCGGCG GCT TGCCGA               TTACCTCTGGGTATG  54 34
APY29_RS08900 1999591 .. 1999610 + -12.8  -5.18371   CGATGTTTGCAAAAA            CGGCCGGG GTCT CTCGGCCG             TTTTCTTTTGTGCGG 100 56
APY29_RS08905 2001073 .. 2001095 + -14.9  -4.57073   TGCAGAGTTACGGGC           TGGCCGACG TCGTT CGTCGGCCA           TTTTTACCGCCCATC 100 46
APY29_RS08910 NONE
        pilV NONE
APY29_RS08920 NONE
APY29_RS08925 NONE
APY29_RS08930 NONE
APY29_RS08935 NONE
APY29_RS08940 2008216 .. 2008231 + -10.4  -6.38039   AAGATGTTCAAAAAG              CCGCGA CGTG TCGCGG               TTTTTTTTTTGCCTC 100 40
APY29_RS08950 2010977 .. 2010989 +  -3.3  -3.07935   CTTGGGGCGCGGGGA                GGGCT TGT GGTCC                TTAAATCCCTGCGCT  43 52
APY29_RS08955 2011118 .. 2011152 +  -7.2  -3.57144   ACCCTGTACCGCCCA    CCACTCCAAGTCCAG ATAGTA CGGGGCTTG-AGTGG     TTTCAAGATCGGCAG  62 23
APY29_RS08960 NONE
APY29_RS08965 2014040 .. 2014066 + -10.9  -2.54812   ATCAATAACAAGTTT        CCTCCG-GTACC CACT GGTGCGCGGAGG         CTTAGTGCTGTCCGT  62 272
APY29_RS08970 2014542 .. 2014581 +  -4.8  -3.23711   CCAAGCTCTAAGGGC  TGCCGTCTGCATGATGCC TTCG GGCATCGAGCCTTCGGTA   TTCCTACCTTCTCAA  48 30
APY29_RS08975 NONE
APY29_RS08980 NONE
APY29_RS08985 NONE
      virB11 NONE
APY29_RS08995 NONE
APY29_RS09000 NONE
APY29_RS09005 2020363 .. 2020399 + -18.8  -3.62275   GAGCACGTAGCCGTT    TACCAACCCCACGCAG ACAAC CCGCGTGGGGTTGGTG    TTTGCGATAGTCGCT 100 39
APY29_RS09010 NONE
APY29_RS09015 2023781 .. 2023791 +  -8.2  -2.82193   GCATCGACTGCCCCA                 CGGC GCA GCCG                 TCTAGTGGATGTGGT  54 83
APY29_RS09020 NONE
APY29_RS09025 2025455 .. 2025467 +  -3.5  -3.57106   CTTGTTCGGAGCCGG                TATTT AAG AAATA                TTGATTTGAATTGGA  51 96
APY29_RS09030 2026776 .. 2026795 +  -6.4  -3.15699   GTAGGTATGCGTGAC            GGCTTGTT TACA GGCAAGCC             TCTTGATCGCTACAT  53 505
APY29_RS09035 2027739 .. 2027768 + -10.7  -2.90075   GCGATCTGGTAAATC       GCCAAGGCGGTCA GGAC TGCTTGCCTTGGC        TCTACTTGCAACGAC  64 68
APY29_RS09040 NONE
APY29_RS09045 2029391 .. 2029419 +  -2.6  -3.72453   GGGATTTTTCATGTC       GCCGAAGAATATA TGGG TAT-TTTTTTGGC        TTTGGGGTTCTTGAT  52 111
APY29_RS09050 2030249 .. 2030263 +  -5.6  -4.08064   CACACTAGCCATCAA               GGGGGT TCT ACCCCG               TTTTCACGGACACTT  65 131
APY29_RS09055 2030780 .. 2030802 +  -7.6  -4.18197   GACAGCCGCGGTACG           TTGGGGGCTC GAC GTCCCCCCAA           TTTTGAGTAGCACCT  72 17
APY29_RS09060 2032264 .. 2032274 +  -8.2  -3.51597   CCAGGGCGATACTCA                 GCGC AGA GCGC                 TTGTGCTTCAACATT  62 302
APY29_RS09070 2033060 .. 2033100 +  -8.3  -2.80816   CAACGTGCTGGGAAC CGCCTGGCCGTTG-CGGCC CTTCA GGCTGACGATG-CCGGGCG TGTAATCCATCGGCC  54 485
APY29_RS09080 NONE
APY29_RS09085 NONE
APY29_RS09090 NONE
APY29_RS09100 2043743 .. 2043773 +  -9.6  -3.22521   CAGCGTGAGCCAACC       CCGGCCGGTCTGGA TGA TCCGGATGCGCCGG       TTCGATTCCTCTGGG  61 33
APY29_RS09105 2044348 .. 2044364 +  -7.2  -3.05596   GATTCGGCGCTGCAA              CGGGCC CAGCC GGTCCG              TTGCGTCGCAAGCTC  54 47
APY29_RS09110 NONE
APY29_RS09115 2045257 .. 2045280 + -14.6   -4.4874   AAAGCAGATATGCAG          GGGGAAGGGC GCGA GTCCTTCCCC           TTTTGCGTTTTTGCG 100 142
APY29_RS09120 NONE
APY29_RS09125 NONE
APY29_RS09130 NONE
APY29_RS09135 2049588 .. 2049604 +  -9.3  -3.05343   AATCGCAGGCCGCCT              CGCCGCG GAA CGCGGCA              TCTTCGGGGTATAGC  60 65
APY29_RS09140 2049694 .. 2049716 + -14.2   -5.4505   CCGACCAAACATCAA           GCCCATGACG TCC TGTCATGGGC           TTTTTTGTTGCGCCG 100 34
APY29_RS09145 NONE
APY29_RS09150 2052338 .. 2052360 +  -7.6   -3.5332   AGCGTGGAAAAGGTG           GGATCCCGTA TGT TTCGGGCTCC           TTCGTTTGAAAGTTT  60 88
APY29_RS09155 2054013 .. 2054035 +   -17  -2.71791   CGCGTCCGGCGCCGC           GGGCGGCTGC ATT GCAGCCGCTC           CTTTCAAGCGGGCAT  84 66
APY29_RS09160 2055348 .. 2055387 + -10.1  -3.53012   TTGCCTGCGGGAGCG GCACGATGAGCG-TGTCGGC AAT GCCGGCATCGC-CGTCG-GC TTTGCCCGCCGCCAA  68 17
APY29_RS09165 2056436 .. 2056449 +  -3.7  -3.08046   GGTGCGCGCCCGGTG               GCGGC ATGA GCGGC                GTTTTGGCATGACAA  45 17
APY29_RS09170 NONE
APY29_RS09175 2058745 .. 2058766 +  -4.4  -3.36878   CCGCGCGTGCAGGAG           GCT-GTGCG ATGAG CGCGCCAGC           TTCTGCGTCAATGAC  48 14
APY29_RS09180 NONE
APY29_RS09185 NONE
APY29_RS09190 2062555 .. 2062581 +  -2.9  -5.63517   TACCTCGTCGGAGGC        TGCGCTCTCGCA CTGA TGCG-GCGCACA         TTTTTTCTTTAGGAG  93 10
APY29_RS09195 NONE
APY29_RS09200 NONE
APY29_RS09205 2064714 .. 2064727 +  -2.3  -3.05463   TCATCGACGGCGCTT               GCGGT TCCG AACGC                TTCCCTAACGCGGCT  41 41
APY29_RS09210 2065907 .. 2065924 +  -4.7  -2.73483   CGGCAGGCGGCTATT             GCGCGGC GTGC GTCGCGG              TGCTTGCGCTCAGAT  44 114
APY29_RS09215 NONE
APY29_RS09220 NONE
APY29_RS09225 NONE
APY29_RS09230 NONE
APY29_RS09235 2070536 .. 2070550 +  -3.5  -2.57468   AACGGACGCGACAGG               GCGTA GCGCA TGCGC               ATTGATCTGATCGCA  39 6
APY29_RS09240 2072063 .. 2072099 +  -6.5  -4.58395   CCTGCGCCGCCGGCA    ACCACGTTGTCTTCG ATCGTGA CGAAGCCATCGTGGG    TTTTTGCGAGCTCCA  78 287
APY29_RS09275 2078586 .. 2078599 +  -3.7  -2.88337   GCAGTGATGCGTGTT               GCACG CGCG CGCGC                TGATTCTGATCTGAT  44 127
APY29_RS09280 2079402 .. 2079413 +  -7.2  -2.82516   GGTGCTGGAGGGCAG                CGCG TAGA CGCG                 TCTCGTGGTCGCCCA  50 417
APY29_RS09295 NONE
APY29_RS09300 2081568 .. 2081598 +    -6  -3.53012   GACACCCAGCGCCCA       CGGGTGCGCAGC TGCAATC GCAGCGCACTGG       TTTAGCGGCAGGCGC  55 221
APY29_RS09305 2083475 .. 2083533 +  -9.5  -4.17048   CCCGCGGAGCTCGAC GCATGGCGCATCCGCCAGATCACCCACGT CGT GCGCGGGATATG-GGCGGAT-CGCCAAGC TTATTTTGCGACGGG  79 172
APY29_RS09335 NONE
APY29_RS09340 NONE
APY29_RS09345 NONE
APY29_RS09350 NONE
APY29_RS09355 2092910 .. 2092950 + -22.7  -3.96148   CCGGGCGATGCGTCG  GCCGATGCGGATGTGGCAT CCA GTGCCGCATCCGCATCGTC  TTTCTGGTCGGCCGC 100 132
APY29_RS09360 NONE
APY29_RS09365 2095906 .. 2095918 +  -3.3  -2.93878   CATTCGCGCTCAGGC                GCGCT CCT ACCGC                TGTCCTTGCATCTTG  42 105
APY29_RS09370 NONE
APY29_RS09375 2099623 .. 2099640 +  -5.5  -2.64155   CTCCGCCAGCGACTG             ACACGTG CGCG CACGTGA              TGGCTTTAAGAGCAG  46 25
APY29_RS09380 NONE
APY29_RS09385 2103594 .. 2103605 +  -5.8   -4.5123   CCCTGCCGTTGGAGG                CGCA ATGA TGCG                 TTTGTTTGCTCGATT  74 18
APY29_RS09390 2105260 .. 2105271 +  -7.2  -2.59298   GCTGATCGTGTCCTT                GCCG CCTT CGGC                 CTGTTGTCTGCAATG  51 46
APY29_RS09395 2106040 .. 2106059 +  -8.6   -5.0538   AGCTGGCGAGGGCGC            CGCG-CACT CGA AGTGTCGCG            TTTTTTACAATGCAG  93 437
APY29_RS09415 2112031 .. 2112055 +   -10   -2.5092   GGTACGCCTGACAGT          GGCGACGC GATGATCGA GCGTCGCC          GTTGCTGCAGTGTTG  59 30
APY29_RS09420 NONE
APY29_RS09425 NONE
APY29_RS09430 2120046 .. 2120073 +    -4  -2.59927   GTGCCGCTGGTGATC        CAGATCAAGGCG GCAG CGCCATGATGCG         TACGTTCTCACGGTT  41 2
APY29_RS09435 2121877 .. 2121894 +  -5.5   -3.0094   TCCCTGGCGGCCTGC             CGCACCG TCCT TGGTGTG              TGTCTGTCGCTGCGG  49 250
APY29_RS09440 2124341 .. 2124399 + -16.9  -3.37464   GCGGGTGGCATCCGT CGATTTGATCGCGCGAACCGGCGCATC CGAGCTC GATGCGCCGGTCCGCGCG--CGAATCC TTGTCGGCTTCATCC  91 53
APY29_RS09445 2127814 .. 2127831 + -12.7  -3.57561   CGTTGTCGCGACCAC             GCGCGCA TGCG TGCGCGC              TTTCAGGAGTTAAGC  77 131
APY29_RS09450 2130581 .. 2130594 +  -5.9  -3.37796   GGGATGCGCTGGCTG               TCCGG CCGG CCGGG                TTCTGCATCGTAAAA  55 377
APY29_RS09460 2131190 .. 2131219 +  -9.3  -3.36878   ATGGCAGGCGTGATG       CCGCCGAGCGCC ATATTCG GGCGCTCG-TGG       TTGTACGTCCATAGC  63 102
        rsmD NONE
APY29_RS09490 NONE
APY29_RS09495 NONE
APY29_RS09500 NONE
APY29_RS09505 2143092 .. 2143102 +  -2.4  -2.60211   GAACAGGAGCCCCCC                 GCCC CGT GAGC                 ACTTTTTCCCGACGT  38 17
         ggt 2144898 .. 2144926 + -10.9  -3.93237   AACCCATTGCGTTGA        CGCCCGGTAGC CGGCAAT GCGGCCGGGCG        TTGTTCGTTGTTTCG  79 48
APY29_RS09515 2146926 .. 2146958 +  -5.6   -3.7732   GCGTCGACGCGCTGA      GGCGGGCGTTTT CAGCGCGAC AGAACGCTTGCC      TTCTTCCTCTGGGAG  60 26
APY29_RS09525 2150633 .. 2150659 +  -2.9  -3.15544   CGCGCTTGGCCTGAA        GGTGGCGCTGTG ATCG CACCACGC-ACC         TTCGTGCAGATCACG  44 13
APY29_RS09530 NONE
APY29_RS09535 2153227 .. 2153248 + -10.1  -2.57931   GCAGGCTAGGTGCAC           CTAGCGGTG TGTC CTCCGCTAG            CTTCTCCGACGTACC  59 113
APY29_RS09540 2153721 .. 2153733 +  -3.3  -3.04517   TGATGAAAGCCGATA                TGGGT TCT ACCCC                GTTTTCACGGACACT  43 24
APY29_RS09545 2154948 .. 2154981 +  -4.3  -2.70298   CGGGGTAGAACCCAA     CCGCCCGCTGCGCGT ACAT GCACGCACATGGCGG      CTTCTACTTCGACAC  42 33
APY29_RS09550 NONE
APY29_RS09555 2156025 .. 2156037 +  -9.1  -3.21099   GGAGAACAACAGGCC                GGTGC CTT GCACC                TTGGTGATCAAGCCG  59 213
APY29_RS09565 2157994 .. 2158011 +  -5.5  -2.84878   CAGACAACGATCCCG             CGGCCTT GAAG AAGTCCG              ATTTCCATTACGACC  48 173
APY29_RS09570 NONE
APY29_RS09575 NONE
APY29_RS09580 NONE
        secD 2162865 .. 2162886 + -10.1  -4.57837   GAGTCCCTCGCAAGA           GCCCGCACA TCCA TGTGCGGAC            TTTTTAGGAAGATCT  95 74
        secF 2163894 .. 2163924 + -22.8  -3.92522   TCATCGATCTGATCA       CGAAAAAACCGCGC GCT GCGCGGTTTTTTCG       TTTCTGGCGTTGGGC 100 45
APY29_RS09595 NONE
APY29_RS09600 2166100 .. 2166123 + -14.6   -3.3482   TAACACTTCATTCAA          GCCGAAGCCGC TTC GCGGC-TCGGC          TTAATTCAAGCGTTA  82 48
APY29_RS09605 NONE
APY29_RS09610 NONE
APY29_RS09615 2168929 .. 2168939 +  -8.2  -2.71011   GAACCCGTCACCGAA                 CGGC ATA GCCG                 TGGTTGAGAACACCT  54 40
APY29_RS09620 NONE
APY29_RS09625 2173187 .. 2173208 + -12.3  -3.62597   AATGGTGGCAGGCAA           GCATGCGCGC AAC GCGCGCA-GC           TTCTTGACGGGTCAC  75 229
APY29_RS09650 2181683 .. 2181701 + -17.4  -5.27335   ATGCCGCACAAAAAA             GCCCCGGC AGT GCCGGGGC             TTTTTGTTTGCAACG 100 504
APY29_RS09670 2192292 .. 2192309 + -10.5  -5.07567   AATATTGACGAAGAG             GGGCGGC CATG GCTGCCC              TTTTTTCGCGTATAA 100 137
APY29_RS09675 2193010 .. 2193031 +  -9.5  -4.75174   TGCTAGCTTTTAAAA           GAGTCCACT GAAA AGTGGATTC            TTTTTGGCTTGGATA  93 55
APY29_RS09680 2193391 .. 2193430 +  -2.8  -3.58343   CCAGCGAGAAATCGC  GTTGCGCAGGCTGGCTG TGATCGC CGGCCAGCAT-CGCGAG  TTTGAGGATCATCGC  51 88
APY29_RS09715 2204692 .. 2204748 + -17.4  -2.92667   CAATCGTATTCGGAA CGGCCGACAGGACGTCGCCATCGCCCGC CAG GCGT-TGGTGGTGA-GTCCTGTCAGCCG TGCTTTCGCAGTTCA  82 238
APY29_RS09725 NONE
APY29_RS09730 NONE
APY29_RS09735 NONE
APY29_RS09740 2210047 .. 2210071 +  -9.9  -3.64283   TGCTTGTTGAAAAGC          GGGGGGCAGCG TGT CGCTGCTTGCC          TTATTGGAAGCTTTG  70 147
APY29_RS09745 2211706 .. 2211731 +  -3.9  -3.91144   AGTGGCGCGGCGCTG         GCGTCGCTGACC GGA GATC-GCGACGG         TTTATGGAGTGTCCG  58 16
APY29_RS09770 NONE
APY29_RS09775 2218812 .. 2218824 +  -2.6  -4.00124   CTGCGTGATTGAGAC                CCGT GCCGA GCGG                TTTCCTTCTCCCGTC  57 42
APY29_RS09780 2220510 .. 2220538 +  -2.5  -2.98942   CGGTGCCATCGCGGC      GG-C-TGCCGCGCT CGCC AGC-CGGCAAGGCC       TCTCTGTGCCGGCCT  41 157
APY29_RS09790 NONE
APY29_RS09795 NONE
APY29_RS09800 NONE
APY29_RS09805 2226307 .. 2226342 +  -8.1  -4.15833   ACCAGCCAAGGCAAT    CGTTGACGCGGCAGC TCATGC GCGGCCGCGTCCGGG     TTTTGCCATCATGGT  76 42
        potG 2227531 .. 2227543 +  -3.3  -3.13522   CGGCGTGGTGCTCAC                CGCAT GAA ACGCG                TGTTCATACGCGGGT  44 19
APY29_RS09815 NONE
APY29_RS09820 2229389 .. 2229399 +  -8.2  -2.70932   ATGCACCAGGTGGCG                 CCGG CGG CCGG                 TGCTTGCGAACACAG  54 124
APY29_RS09825 2231341 .. 2231361 +  -3.3  -3.73647   CGCGTGATCGAGCAC           GTCGCGCA GATAGA TGC-CGAC            TTCTTCGTGGATCAA  53 506
APY29_RS09875 2240674 .. 2240709 +  -6.7  -3.85704   CACTCAAGGATGTGA    GCGCCGGTTTCGCCA GCCTGG TGGCTGCGCTGGCGC     TTTGGTGGTTGCTCC  65 120
APY29_RS09880 2241783 .. 2241803 +  -7.5  -2.71731   TGGATGACCGTGCAG            CCGGTCG GCGCGCG CGGCCGG            TACTTCGGACATGGC  52 50
APY29_RS09885 2242147 .. 2242157 +  -3.2  -3.61983   GCATAGGGCCGACTG                 CGTA CAT TGCG                 TTGTCTGTGCATTAA  51 71
        petA NONE
APY29_RS09895 NONE
APY29_RS09900 2245036 .. 2245075 + -11.5  -2.70932   GCTCCCAACGGGAAA GCGC-TTGCCCCTCTC-CC GTGC GGAGAGAGGGGCAGGGCGA  TGGTTGGCAGGCGAA  63 142
APY29_RS09905 2245934 .. 2245964 +  -4.7  -2.87132   CGATCAGGAAAAGAA      GCTG-CGCGATCTGC CGG GCTGAT-GCGACGGC      TGTATGCCAACAGAC  46 4
APY29_RS09910 2246643 .. 2246658 +  -2.4  -3.17723   CGTATGACCTGCAGC              CTCGCC AAGT GGAGGG               TTCGATTGCACGTGG  43 194
APY29_RS09915 2247362 .. 2247376 +  -2.1  -3.14602   GCCAGCCGCTGGGCA              TCCTGC ATAC GC-GGA               TATTGGTGGAATGCA  42 406
APY29_RS09930 2252404 .. 2252426 + -11.2  -3.05384   GTGGCCACTGGATTG           GACGGAGGCG GCG CGCCGTCGTC           TTCGATCCAGAGCCG  66 104
APY29_RS09940 NONE
APY29_RS09945 2255625 .. 2255654 +  -4.2  -3.14132   AGCAAGGGCTGCAGA       TGCTGCG-GTCGC CGGCA GCGCCACGCAGAA       TTGATCGCAGGCCAG  45 290
APY29_RS10000 NONE
        ligD 2268399 .. 2268419 + -10.3  -3.13403   TTGCCGTCGGTGGCG            GCCTGCGCC AGC GGCGCGTGC            TCTTCGTCCGGCAGC  64 444
APY29_RS10020 2269555 .. 2269575 +  -8.2    -3.322   CTCTTTACGTTTTTT            TGGCCGCC CTTTT GGCTGCCA            TTAGTGTGTGCGCCT  60 21
APY29_RS10025 2271734 .. 2271785 +   -10  -2.62616   GGCGGCAGTTCCCGG C-CGTCAGCCGTGCAGCGGGCGCCC GCA GGGCACGCGCTGCACCGATCATGCG TCGTGTGCAAGGTAG  59 367
APY29_RS10030 2273662 .. 2273688 + -15.8  -3.14132   GCGACGTTGCATCGC         CGCCTGCGGATG CAG CGCCCGCAGGCG         TTGCTGCAAGCCGGC  78 523
APY29_RS10045 NONE
APY29_RS10050 NONE
APY29_RS10055 2279809 .. 2279851 +  -6.2  -3.58726   ACTGATTCCTTAGAT GACGG-CGTCTGCGCGCCG CCGGAT TGCCGTGCCGATGTCCGTC TTGTCTGTCACACCG  57 62
APY29_RS10060 NONE
APY29_RS10065 NONE
APY29_RS10070 2283734 .. 2283769 + -17.6  -3.24021   GGCCGGCCACTGATC    GGCTGCGCCTGGGAGCG TGA CGCTCCT-GGCGCAGCG    TTCGATGTTTGGAAG  89 28
APY29_RS10095 2287389 .. 2287403 +  -9.2   -5.4505   GCAGGCAACAAAAAA               CCCGCG CAA TGCGGG               TTTTTTGTTGCCCAG 100 64
APY29_RS10115 2292267 .. 2292290 +   -16   -5.4833   TAGGGTTGCCAAAAA          CGCCGGTCGC GCAA GCGACTGGCG           TTTTTTATTGCCTGC 100 55
APY29_RS10120 2293331 .. 2293343 +  -5.5  -4.54821   CTTGAGCGCCTGCTG                CAGCG AGA TGCTG                TTTTGTAGTTCGACT  74 249
APY29_RS10130 2295865 .. 2295875 +  -3.2  -3.14564   GCTGGGTGTTCGATG                 CTGT CGT GCAG                 TTCCTGACGCGCTCA  44 8
APY29_RS10135 2296558 .. 2296587 +  -8.5  -2.53715   AGCTCTGGAAGCGAC       CCTGGGTGCGTGGC AGC GCC-TGCCTCCAGG       ATTGCTCCTGCTGAA  53 46
APY29_RS10145 NONE
APY29_RS10150 2300233 .. 2300274 +  -7.2  -3.42996   GCAGTGGGCGTGTGG CGCCGGTGCCAGGCGTGTCC GCTC GGGC-CGGCTG-CGCAGGCG TTCTGCTGGCTGCTC  60 54
APY29_RS10165 2302068 .. 2302101 + -26.9  -3.15249   CACAGCGGCACCCAA     CGCACAAGGCCGGGA GCGA TCCCGGCCTTGTGCG      TTACTGCGCCGTATG 100 77
APY29_RS10175 NONE
APY29_RS10180 NONE
APY29_RS10185 2307190 .. 2307210 +  -3.2  -3.78953   GTGAGTGCCGTGGGA           GCGCGCCTG AGCG CAG-CGGGC            TTTCCTGGTAAAGCT  54 37
         efp 2309187 .. 2309219 +  -9.8  -3.04144   GGAGCAGCTGACAAA     CCGACTGCCC-AGTC GCCA GGCTCGGGCGGCCGG      TGTTCGGAATCGGCG  62 106
APY29_RS10200 NONE
APY29_RS10205 NONE
APY29_RS10210 NONE
         gph NONE
APY29_RS10220 2313923 .. 2313933 +  -8.2  -3.64103   CATTGCAGTGGCGTG                 CCCG GGC CGGG                 TTTGCCCTGTAGCTG  65 263
APY29_RS10245 2319003 .. 2319023 +  -3.9  -3.09492   GGTTCGGCTCTGCTG            TGCTGGTCA CGC TGACAGGCG            TGTTCCCATTGGCGC  45 351
APY29_RS10255 2319965 .. 2319980 +  -6.8   -4.0162   TTTCGCGCGCAGATG              CGCTGC ATCA GTAGCG               TTTGTACTATAACCG  67 128
APY29_RS10260 2320718 .. 2320761 + -18.9  -3.33492   TCCGCTGCGCTGAAA CCTGCCTCGCACACGCCACC GTCAA GGTGGCGTGTGCGC-GCTGG TTGTGCGATCGGTAC  93 28
APY29_RS10265 2321748 .. 2321777 +  -5.5  -3.09516   CGCCAACGCACCGCA       GCGCGATGATCTG CCAC CGGCACAGCGCGC        TTGCGTGATGACGCC  49 57
APY29_RS10270 2322202 .. 2322224 +  -6.3  -3.27774   ACATCGGCAGGGCCT          GCC-AGCAGC GCGG GTTGCTCGGC           TTCGTCCTTCAGCTG  53 127
        dksA 2330406 .. 2330422 + -10.8  -5.93809   TGGCTCGCCGAAAGA              CCCCGC CATGT GCGGGG              TTTTTTTTATGGGCG 100 50
APY29_RS10335 2334720 .. 2334737 +  -9.1  -5.46698   TTCCGACGTTGAAGA             CCCAGCT CCCA GGCTGGG              TTTTTTCGTTTTGGC 100 209
APY29_RS10340 NONE
APY29_RS10345 NONE
APY29_RS10350 NONE
APY29_RS10355 NONE
APY29_RS10360 NONE
APY29_RS10365 NONE
APY29_RS10370 2341758 .. 2341771 +  -6.7  -3.57263   GCAAGAGCCTGCACA               TCCCT GTGC AGGGA                TTTAACGATGCGAGT  59 53
APY29_RS10375 NONE
APY29_RS10380 NONE
        proB 2344603 .. 2344616 +  -3.1  -2.71712   TGGAGAATCGCAAGA               GCTTCG CAC CGA-GC               GTTTCCCAGCGCCGA  40 48
APY29_RS10390 2346083 .. 2346094 +  -3.6  -3.51365   GCTAGTCGAGCGATG                CGCG GTCG CGTG                 TTGTCTGGCGTGTGC  49 167
APY29_RS10400 2348213 .. 2348246 + -10.8  -3.02144   TGCCGGTACGTTGAG     CGCGCGGGCACCGC GTGCCG GCGGCGCCCACGCA      TCTTCCAGCAACTGC  66 27
        cydD NONE
        cydC 2356663 .. 2356689 +  -2.9  -3.75766   CGACACCGCAGCCAG        CGTCTTGCGCGG CAAC CCGC-TGCGACG         TTGTTCGGTTCTGGC  53 452
APY29_RS10495 2366898 .. 2366909 +  -7.2  -4.82154   TCGGGAATCGTAAGA                GCGG TCGG CCGC                 TTTTTGATCTGAATT  88 66
APY29_RS10500 2368195 .. 2368215 +  -5.3   -3.0644   CGATCTGTTTCAGGC            TCTGCGGGT CCA GCCGGCGGA            TGTTGGCCGTTCCGT  47 412
APY29_RS10510 2369545 .. 2369562 + -12.7  -4.73682   GTCCGCCATAGAAAA             CGGCCCT TTGC AGGGCCG              TTTTCTATTGTGCGG 100 315
APY29_RS10530 NONE
APY29_RS10535 2374481 .. 2374492 +  -2.2  -3.63515   GACTCCTGGCGAGGC                CGGA TCGA TTCG                 TTGTTAAGCGTGACC  49 186
APY29_RS10540 2375781 .. 2375800 +  -9.2  -3.13522   GGCGTTCTGTCCGCT            CCCGCTGC CCCC GCAGCGGC             TGTTCCTGCACCACT  61 82
APY29_RS10545 NONE
APY29_RS10550 NONE
APY29_RS10555 NONE
APY29_RS10560 NONE
APY29_RS10565 NONE
APY29_RS10570 2386825 .. 2386871 +  -9.9  -2.77523   AATGAGGCAGGCCTG GCGGCTGTCCCGGGCAGCGCC AGCAC GGCGAAGTTCCGAACGGCCGC TCATGTTGGTCGCCC  60 36
APY29_RS10575 NONE
APY29_RS10615 2393536 .. 2393558 + -13.4    -3.551   AGGCGTTCCAAAGCT           CCGTCGCGCA TCC TGCGTGGCGG           TTCTATGACTTCCAA  81 75
APY29_RS10620 2395379 .. 2395413 + -14.3  -2.91264   GCTCGCAAGAGCGTA    ATGG-ATCGGCCCGGG CTTG CCCGGGCCGATTCCGA     TGTGTCAGTCGAAAA  77 50
APY29_RS10625 2395816 .. 2395845 +  -2.1  -3.10464   CTTCCCGACGGAGTC       TCGCCATGAAGGTG CTT CGCTTGC-TGGTGA       TGTTGGCCTTCCTGC  41 87
APY29_RS10630 NONE
APY29_RS10635 2397296 .. 2397306 +  -3.2  -2.84812   CAAGCCGCTGTTGAA                 CTAC GCG GTGG                 TCTGATGGTGTGGCT  42 10
APY29_RS10640 2398254 .. 2398271 +  -7.7  -2.51464   CGATCTGGCATTTTC             TGCGCGA TGGA TTGCGCA              ATTCCTGACTAATGG  50 0
APY29_RS10645 NONE
        galU 2401114 .. 2401145 + -18.8  -3.58533   GCCTGATCGCTGTTT      CTACGAACGACGCC AGCT GGCGTCGTTCGTCG       TTTGGGAGCTTGTCG 100 46
APY29_RS10655 2403252 .. 2403272 +  -5.4  -3.38046   TCCAGTTGTTCGGGC            GTGGCATC TCTTT GATGCTGC            TGTTTCCACTGGGCA  53 160
APY29_RS10665 2404560 .. 2404574 +  -3.4  -3.63515   CAGGCAAACGGTGAG               CGGTGC AAC GCGACG               TTGTTGCGAATCCCG  51 101
APY29_RS10670 2406174 .. 2406189 +    -6   -3.9344   GCTTCCTCGTCCGAT              AGCGGC CGGC GCCGCG               TTTGCTGTTGCGATT  62 84
APY29_RS10675 2408029 .. 2408046 +  -2.7  -4.56775   ATTGATCTGACGTAG             TGCAATG ATTT CATTGTG              TTTTTACGCCAGGAT  68 252
APY29_RS10680 2409775 .. 2409793 + -11.6  -2.62983   CCCTGGTAGATGCCG             CGCGAGCC GGC GGCGCGCG             TGCTATGGCGCTGGA  61 488
APY29_RS10710 2415158 .. 2415182 +  -7.8  -3.16534   ACATGATCAACACGA         TTCGGCCTGGC GGGC GCC-GGCCGAC          TTCCGTGTCCTTGAT  56 150
APY29_RS10740 NONE
APY29_RS10745 NONE
APY29_RS10750 NONE
        trbB NONE
APY29_RS10760 2425639 .. 2425649 +  -8.2  -2.64616   GTTCTTCTCGTTCTC                 CGGC GGG GCCG                 TCGTATGAGTACGGC  53 7
APY29_RS10765 NONE
APY29_RS10770 NONE
        trbJ NONE
APY29_RS10780 NONE
        trbL NONE
APY29_RS10790 NONE
        trbG NONE
APY29_RS10800 NONE
APY29_RS10805 2434120 .. 2434148 +  -4.5  -4.46233   TTCGTCGATCGAAAT       CGCCGCATCGGT GATCTG ATCGC-GCGGCG        TTTCTTTGAGATTGG  69 310
APY29_RS10815 2438041 .. 2438077 +  -4.2  -3.61404   AGATGCTCCTCAGCG    GACCTTGGCCAATGCC ACGCG GGCGTCGGCCATGAAC    TTCTGTGCTTCCTGC  53 385
APY29_RS10840 NONE
APY29_RS10845 NONE
APY29_RS10850 2446349 .. 2446368 +  -3.5  -2.74461   CGATGATGGAATCGC            GATCGGT ATCCAG GCCGGTC             ATTTCCAGATCGATC  41 491
APY29_RS10870 2449315 .. 2449331 +  -7.9  -3.72051   TGCTTGAGGCAGCTG              CAAGCGC TGT GCGCATG              TTTACGCTTCTTCCA  65 390
APY29_RS10875 2450583 .. 2450604 + -11.5  -5.21709   AATGGATCAGCGAAA           GGCCGGCTC GAGA GAGCCTGCC            TTTTTTGATCTGGCG 100 50
APY29_RS10910 2459453 .. 2459465 +  -5.5  -2.83504   GTTGTCCACTCTGGG                CTTGC AGC GCGAG                ATGTTTTGATCGGGG  48 4
APY29_RS10915 2460200 .. 2460220 +  -9.7  -2.55999   CCGCGTGCGGCGTGC            CGCTTCAGT CAT ACTGATGCG            CTTCGTGTCAGATCG  56 54
APY29_RS10920 2460762 .. 2460784 +  -6.1  -2.87132   GCACGTGGAGTGCGT           GCCGCCGGC ACTGC GCCGGCAGA           TATCTAGCCGGGCCC  48 57
APY29_RS10930 NONE
APY29_RS10935 NONE
APY29_RS10940 2464988 .. 2465000 +  -4.7  -4.42619   ACGGCCGTCACGATA                CGCAG CGG CCGCG                TTTTCTAGACTGTTG  71 89
APY29_RS10945 NONE
APY29_RS10950 2466015 .. 2466062 +  -7.7  -3.56092   CTTCTCCGCCAGCGA CCACGCGCCCG--TCCG-GTGTGC TGC GCACGTACAGATACGGGCGCGCGG TTTCCCACATCATGG  60 318
APY29_RS10960 2467370 .. 2467381 +  -2.2  -4.65895   GTGGCGGGCCGGCAC                TGCG AAAA TGCA                 TTTTTCAGTGAAGCG  68 84
APY29_RS10965 2470128 .. 2470140 +  -3.3  -3.27786   AAAGCAGCTAACAAC                CAACG ACG CGGTG                TTCCTCGCTTTTCAA  46 379
APY29_RS10985 2474633 .. 2474658 +  -3.1  -4.84527   GCAGCACCAGCGAAA         GCCCTTCTGGA GAAG TCCGGTGGGGA          TTTTTGCTATGTGGC  75 48
APY29_RS10990 2475423 .. 2475441 + -11.6  -3.71527   GACAGGCAAGAAAAA             ACCCCGGC AGT GCCGGGGC             TTTAGATGATTGGCG  78 297
APY29_RS11005 2476032 .. 2476044 +  -9.1  -3.57263   GTGAGCGCGATCATC                GCGCA CAC TGCGC                TTTCGGCGTGGCGAT  68 216
APY29_RS11030 NONE
APY29_RS11035 NONE
APY29_RS11040 2484909 .. 2484919 +  -2.4  -3.66643   GGCCGTTGAACGATT                 CGAC GTA GGCG                 TTCTGGTTTGGTTTG  51 245
APY29_RS11050 NONE
APY29_RS11055 2487328 .. 2487350 +  -4.9  -3.59979   GCGGCGTTGGACTCG          CTGATGCCGCC GGT GG-GGCA-CAG          TTTGAGCTCGGACAA  55 130
        ugpC 2494637 .. 2494666 +  -2.6  -4.21194   AGGTGCTGCATGACG       TCGACGCCCGCC TGGCAC GGCTCGCGACGG        TTTTCGCTGCTAACG  59 117
APY29_RS11095 2495742 .. 2495763 +  -5.9  -4.07568   GGGAAAAAAATGGAC           GCTGCATCGA TTT TTGA-GCAGC           TTTTAGCCACAGCGG  65 9
        sdhC NONE
        sdhD NONE
APY29_RS11110 2498393 .. 2498409 +  -3.5  -3.79747   GGATGTGGACGTGGT              CCCGCCG AAG CCGCGCG              TTTACTGATCGATGC  54 1
APY29_RS11115 NONE
APY29_RS11120 2499467 .. 2499504 + -17.7  -4.07687   CACGGGGATGTGGTT   CG-CAGCGGCACCGGCCC TTG GGTCAGGTGCCGCTGTCG   TTTTCGGACCGCCAT 100 63
APY29_RS11125 NONE
APY29_RS11130 2500204 .. 2500225 +  -3.8  -3.09671   TAGCGTCCCTTTCCC           GG-TTGAAC CGCAT GTTCAAACC           TATTCCGGTTGCCAT  45 38
APY29_RS11135 NONE
        lolD 2502580 .. 2502633 +  -4.3  -2.71681   GTCGGACTCTACCAA CGTGTGTTGCGCGGCCACCTCTGCCC ACA GGGCAGGTGCGGTCTGGCT-CATGCG TGCTTCCAGCGGTTC  43 422
APY29_RS11150 NONE
APY29_RS11155 NONE
APY29_RS11160 NONE
        msbA NONE
APY29_RS11170 2510288 .. 2510300 +  -4.7  -3.86202   ATCGGTGCAATCAGG                GCGCG CGG CGCGG                TTTGATGTCGTGCAG  60 185
APY29_RS11175 NONE
APY29_RS11180 NONE
APY29_RS11185 NONE
APY29_RS11190 NONE
        pgsA NONE
APY29_RS11200 2515737 .. 2515757 +  -5.4  -4.00532   CAGGGGTCTCGTTGT            TTCAAGGC AGGAC GCCTTGGG            TTTGATGTTTCGGCC  63 62
APY29_RS11205 NONE
APY29_RS11210 2516048 .. 2516061 +  -8.1  -5.26875   AGGTCGTTGAAAAGA               GGAGC TTCG GCTCC                TTTTTTCATTCCAGC 100 74
APY29_RS11215 2518219 .. 2518238 +  -2.8  -4.21812   CTATCAAATCACGCT            CCTTTCTT CACC AAGAGCGG             TTGTTTTCCGTGGAC  61 85
APY29_RS11225 2519633 .. 2519662 +  -9.3  -3.36878   ATGGCAGGCGTGATG       CCGCCGAGCGCC ATATTCG GGCGCTCG-TGG       TTGTACGTCCATAGC  63 386
APY29_RS11270 2532094 .. 2532106 +  -4.7  -2.52464   ATACCCGGCGTGCCG                CCGCC GTG GCCGG                TGGGTTGAAGGCCGG  42 295
APY29_RS11280 2534515 .. 2534529 +  -5.6  -2.52623   CAGTAGCAGAGGGAC               GACTGG CCC CCAGCC               CTGTTGTCGCAGCAG  45 268
APY29_RS11285 NONE
APY29_RS11290 2535916 .. 2535929 +  -3.7  -3.37464   TCGTGCAGGCCGCAA               CGCTG AAAG CCGCG                TTATCCAATTGATCG  48 0
APY29_RS11295 NONE
APY29_RS11300 2537725 .. 2537735 +  -2.4  -3.39955   TCTGCCAGCATTGTA                 GCGC TCT GCGA                 TTAGCTTTTAAATTT  47 86
APY29_RS11305 2538460 .. 2538472 +  -4.9  -4.56597   TATTTTCAAGCCATA                TTGAA TAA TTCAA                TTTTTAAGAAAAAGA  74 22
APY29_RS11310 NONE
APY29_RS11315 NONE
APY29_RS11320 NONE
APY29_RS11325 NONE
APY29_RS11330 2543684 .. 2543694 +  -4.6  -3.22789   CCGATGAGTTTCCTT                 GGTC ATC GGCC                 TTCGGTTGATCTGGT  49 484
APY29_RS11340 2545161 .. 2545178 +  -9.8  -3.05715   AAGAGTCAAGCAAGT             CCGGCG CACTCT CGCCGG              TTGCCTCGGCACCTT  62 167
APY29_RS11350 NONE
APY29_RS11355 2547985 .. 2547998 +  -5.3  -2.62184   GAATTGAACCAGACT               GGAAT AGGA ATTCC                TCGTGTAGCAGGAGA  43 77
APY29_RS11360 2548594 .. 2548618 +  -5.7  -3.88232   GTCGCCGAAGGCATT          GTTCAATCCGA CCA TCGGATCGAAG          TTATTGTGTGGCCGG  60 235
APY29_RS11415 NONE
APY29_RS11420 2559100 .. 2559120 +  -7.6  -3.54919   GTGCTGATGAGTCGA            TAGCCGGA AAAAA TTCGGCTA            TTTCAGCGCATCCTT  62 137
APY29_RS11425 NONE
APY29_RS11430 2561115 .. 2561125 +  -6.8  -3.75105   TGACCGATGGCGTCG                 CGGT TAC ACCG                 TTCTTCGTGGCTTCG  61 179
APY29_RS11565 2583795 .. 2583811 +    -3  -3.25592   TGGAACGTGGTGTGG             TCCCGCA TCGT TG-GGGA              ATTTTCTAAAGTTGT  46 42
APY29_RS11570 2584738 .. 2584763 + -12.7  -5.55769   CATTCAGAAAAGAAA         GGCCCTT-ACTC AAT GAGTGAAGGGCC         TTTTTTCTTCTGGAA 100 54
APY29_RS11600 2591034 .. 2591068 +  -8.5  -3.76373   GCATTGCAATGAAAC    GGGGG-CGGC-GGGCGG GTT CCTCTCGGCCGTTCCCC    TTTGCCTATTAGCCA  69 45
APY29_RS11630 2595406 .. 2595425 +  -3.5  -3.86346   GCAACACACGGGACC            GCCATCG AATTTC CGATCGC             TTTGTAGCGCGGTCC  57 332
APY29_RS11690 2608166 .. 2608178 +  -3.3   -3.4178   AACCGGATCTAATCA                GGAGA ATT TCGCC                TTCTGATCGAATCGT  49 468
APY29_RS11700 NONE
APY29_RS11705 NONE
APY29_RS11710 NONE
APY29_RS11715 2614009 .. 2614025 +  -2.1  -4.34402   ACGCTGTCTTATCGC              GCGCTTG TCA CCAGCAC              TTTTAATCTGACCCA  62 20
APY29_RS11720 NONE
APY29_RS11725 2615952 .. 2615972 +  -3.3  -2.96444   AGTTGCTGATCAGCG            TTCAAGGTG GGT CAGTTTGAA            GTTGTTGTTGACACG  42 40
APY29_RS11730 2619233 .. 2619263 +  -2.4  -3.34013   AACGCTGATTGCGAA       CTGTGCAAGTGCTG CGA CGGCGATTGCCAAG       TTGCTTAAACGCCTG  45 154
APY29_RS11735 NONE
APY29_RS11740 NONE
APY29_RS11745 NONE
APY29_RS11750 2626589 .. 2626615 + -10.3  -3.17392   GCTGCGATGTCGCAG        GCC-AAGAAAGG AGAA CCTTTCTTCGGC         TTCACTTCGCGGATG  62 398
APY29_RS11760 2627410 .. 2627426 +  -5.7  -3.63569   AACGATTCGACATTC              CGCGCTC TCA GGCCGCG              TTATTCAGACCTTCC  57 108
APY29_RS11770 NONE
APY29_RS11775 2631657 .. 2631672 + -10.4  -3.72324   CCCAGTGCGAACAAT              CGCCGA GCCA TCGGCG               TTCTTGGTCGAACTG  74 226
APY29_RS11790 2644056 .. 2644101 +  -6.8   -3.6502   GTTATCGCGTGGACA G-GCCGCGC-CATGCCTTCGCC CGCG GGCGAAGGCAACCGTGGGGCGC TTTGCCTGCAAGATC  59 158
APY29_RS11805 2646654 .. 2646678 +  -4.3  -2.71712   GGTGAGCAGATAGCC         GC-CGGTTGG CGCTTC CCAATCGAGC          ATTTCGCCGGCGCAA  43 111
APY29_RS11820 NONE
APY29_RS11825 NONE
        sirA 2650860 .. 2650879 +  -9.2  -4.28254   TGGCGCATAAAAAAA            CAGCGGCC CGAA GACCGCTG             TTTTCGATGTTGACA  83 472
APY29_RS11840 2655989 .. 2656025 + -17.9   -2.7185   GCGCTGGACCAGCTC    GGTCGCTGACGCAGCCG TGG CGGCTGCGCCAGCGCGC    TGGTTCAGCCCTCGT  86 17
APY29_RS11865 2660662 .. 2660681 +  -4.8  -2.70932   GCGACGCCCCCTACA            TCCCGCGC GACA GCGCGGCC             TGATTCCGCACCACC  44 3
APY29_RS11870 2662766 .. 2662779 +  -8.1    -3.224   CTCCAACTGAGCAAA               CGCGA TCAA TCGCG                TGTTGTCCCGGCTTG  58 264
APY29_RS11885 NONE
APY29_RS11890 NONE
APY29_RS11895 2665357 .. 2665380 +  -2.4  -4.20516   CATATTTGGGCGGCC          TGC-CCTGCTT ACG AGGCAGCTGCA          TTTCTTGGGTGCCGG  62 383
APY29_RS11920 NONE
APY29_RS11925 2669261 .. 2669278 +  -3.3  -3.86346   TTAGCACCACCCTGG             CCCTGCT CACA GGTGGGG              TTTCTACGCAGCTGC  56 293
APY29_RS11965 NONE
APY29_RS11970 2672563 .. 2672576 +  -3.1  -3.72893   CGGCACTACAGAACG               GCGCGA CAT TC-CGC               TTTGATGACAGCATC  54 119
APY29_RS11975 2673126 .. 2673155 +  -9.3  -3.36878   ATGGCAGGCGTGATG       CCGCCGAGCGCC ATATTCG GGCGCTCG-TGG       TTGTACGTCCATAGC  63 98
APY29_RS11985 2674668 .. 2674687 +  -2.8  -3.57462   TGCTGCCTGATCGGT            GATGGCAT CGGG ATGGCGTC             TTTGAAGATCGCGTG  51 99
APY29_RS11990 2675268 .. 2675289 +  -3.5  -3.58343   ATGGGCGACCCTTGC           GGTTGCCTG ATGA CTGGCTGCC            TTTGCAGATGCTGCC  51 16
APY29_RS11995 2675752 .. 2675777 + -12.5   -4.8083   ACGTGCAACTGGACT         GGCGCCCCTGT TTTG GTGGGGGCGCC          TTTTTCATGATCTTG 100 83
APY29_RS12015 2680860 .. 2680884 +    -2  -2.81547   ACCGGTGCCCGGAGT          CCGCATATGC CACAC GCATGCTCGG          TGGTTCCTGTGCGCC  39 71
APY29_RS12020 2681100 .. 2681138 +  -8.9  -3.64703   GATTGACGATGTACT  TGCGGCTGGCG-CGGA AGAATTTG TCCGGCGCCAGTTGCG   TTTCAATCGCGCCGA  65 185
APY29_RS12040 2687088 .. 2687108 + -15.4   -4.4078   GACAGATAGAAGAAA            GGCCCCGG CATGT CCGGGGCC            TTTTCGTTGACGGCC 100 103
APY29_RS12050 NONE
APY29_RS12055 NONE
APY29_RS12060 2692959 .. 2692970 +  -2.2  -3.14132   CGGAAATCCCGGGGC                GGTT CAGA AGCC                 TTCGTCGCAACGCGC  43 59
APY29_RS12065 2694496 .. 2694517 +  -5.7  -3.05384   CGCGGTTCCATGAAT           CACGCGCTG CATC CAGCGCCGG            TTGCGTAACGGCGGC  49 28
APY29_RS12070 NONE
APY29_RS12075 2696485 .. 2696503 + -17.4  -5.04325   ATGCAGGCAAAAAAA             CGCCCCGG CAT CCGGGGCG             TTTTTCTCATTTCCA 100 268
APY29_RS12085 2709341 .. 2709351 +  -8.2  -3.05816   GGCAATCGCACCGCG                 CCGC TAT GCGG                 TTGCATGCGCGATGC  57 72
APY29_RS12110 2712931 .. 2712941 +  -3.2   -4.4727   CAAAGCCGCGCCGGC                 TACG GGT CGTG                 TTTTGTCCGTCTTCC  69 252
APY29_RS12130 2716395 .. 2716419 + -11.4  -2.52464   GCGAGCAACGCTCGG         CGCGCCGTGCG CTGC TGC-CGGCGCG          TGCATTCGCCACACC  62 97
APY29_RS12150 2719296 .. 2719320 +  -5.6  -4.65895   ACTGGACGTCTTCTT          GGCCGCCG CCTTGGGCA CGGCCGCC          TTTTTCGCTGCGCCC  77 170
APY29_RS12160 NONE
APY29_RS12165 2723790 .. 2723839 +    -2   -4.3208   CCTCGTTGCGCGTAG CGCCGTT-CGAACTCTACAGGCGA TAGG TCGCCAGTTGAAC-CGTGGCGGCG TTTTGGGTTGTAGAA  62 119
APY29_RS12175 2726045 .. 2726092 +  -8.3  -3.50853   TGCTGATAGTAGTTC GCTTCTGCTTCGGCCGGTGGG ATGTCG CCGATCGGGCCAAGCAGGCGC TTGTGGTTGAACCAG  62 133
APY29_RS12185 2728607 .. 2728620 +  -3.7  -3.53811   ATTTACAGATCATAA               GTCCC TCGT GGGTC                TTTCAAGAACCTCGC  53 124
APY29_RS12190 2730375 .. 2730429 +  -4.9  -2.56715   CTAGCAAGCCATATG GCAAATAGCGCATCCCCCCATCTCCG ATGC CGGGGATGGGGGGAT-TACCATCCAC TGCCTTCATGAGGGT  43 101
APY29_RS12205 NONE
APY29_RS12210 2733494 .. 2733524 +  -5.3  -4.14392   CGCCAGTTCCCGCTC      CAGCCGG-GTCTGG CGTT CCAGCCACTGGCCG       TTTTCCCGGTTGAGC  64 89
APY29_RS12230 NONE
APY29_RS12235 NONE
APY29_RS12250 NONE
APY29_RS12255 2743657 .. 2743671 + -11.4  -2.84707   CTGCAAGCGCAGCCC               GCACCG CAT CGGTGC               TCATCTTGTATGTCG  63 99
APY29_RS12300 2751635 .. 2751655 + -11.8  -5.09521   AGCAGGCAGCAAAAA            GGCCGGGT CACAA GCCCGGCC            TTTTTGCTTTGTTAC 100 161
APY29_RS12315 2754097 .. 2754109 +  -9.1  -3.35679   TTGGGGCAACGCCGA                CGCCT GTG AGGCG                TTATCCGTAGGGGCC  63 111
APY29_RS12320 NONE
APY29_RS12325 2756178 .. 2756190 +  -7.7  -2.56761   CATACGTGTAAAAAT                GACTC ACA GAGTC                TGACTTCGCCTTTTA  51 55
APY29_RS12330 2757021 .. 2757050 +  -9.3  -3.36878   ATGGCAGGCGTGATG       CCGCCGAGCGCC ATATTCG GGCGCTCG-TGG       TTGTACGTCCATAGC  63 59
APY29_RS12340 2760516 .. 2760546 + -11.9  -2.88544   AAGGCCGGGCAGCGT      GTTGCGCTGGCCGT GGAA ACGGCC-GCGTGAC       TCTGTGGCCATCAGC  67 504
APY29_RS12355 NONE
APY29_RS12360 2762927 .. 2762947 +  -6.1   -3.2218   GTCGAACGGGTCAAT           GCGACGCG ATTTCC CGCG-CGC            TTGGTCGATGTTGAG  51 509
APY29_RS12375 2763710 .. 2763723 +  -2.3  -4.30885   AATCCTTAGTTGACA               GGGAG TTAG CTCAC                TTTTGGCTGTGTTTT  62 32
APY29_RS12380 NONE
APY29_RS12385 NONE
APY29_RS12390 2766515 .. 2766557 + -14.8  -2.78715   ATCACGCGGTCGCCG TCGGCCTCGATGACGAAGGC CCG GCCCTCGTCGTCGCGCTCGA TCTGCTGCACCACTT  72 370
APY29_RS12405 2767918 .. 2767936 +  -7.3  -3.39327   CTTGAGACGGGCGAT             CTCGGCG GTCAG CGCCGCG             TTCTGGGTCTCGCGC  58 272
APY29_RS12420 2769693 .. 2769722 +  -4.9  -3.33492   TTTCGGTGAGGCGGA       GCGAATC-GGCGCG CTC CCCGCCAGACTTGC       TTCTACAGTCACTGC  50 103
APY29_RS12425 2771071 .. 2771084 +  -2.3  -4.30885   AATCCTTAGTTGACA               GGGAG TTAG CTCAC                TTTTGGCTGTGTTTT  62 271
APY29_RS12430 2771764 .. 2771776 +  -9.1  -3.63515   CAGCTGGCAGTATGC                GCGCA CCA TGCGC                TTGTTACGCATGCAG  68 132
APY29_RS12470 2778896 .. 2778908 +  -9.1  -3.53444   GGCAAGATTGCACAT                CGCAG CTG CTGCG                TTTGCGCGACAATGG  65 150
APY29_RS12475 2780256 .. 2780280 +  -6.3  -4.09685   GCTCTCAATGTCGAG          GCGTTCGCTTT TTC GAAGCGTTCGC          TTTTACGCCGTGACC  67 211
APY29_RS12520 NONE
APY29_RS12525 NONE
APY29_RS12530 2793312 .. 2793331 +   -15  -3.83502   ATGCTGTCGCCAAAA            GGGCGTGC GCAA GCACGCCC             TTTGCTCTGCCGGTC  89 135
APY29_RS12550 2800227 .. 2800241 +  -9.2  -3.68073   CAGCCACTGCAGGCC               GTCGCG TGG CGCGGC               TTCTTCGCTGACGTC  68 375
        trxB 2806415 .. 2806432 +    -4  -2.70932   CGCTTCCTCGACAAG             AGCGCC TGAGAT GGCGCC              TGATTGCCGGCCGCG  42 17
APY29_RS12575 2807856 .. 2807879 +  -5.2  -3.97947   CAGCTGCCCTACACT          GCGCAGATGG CGCG CCATCTCCCC           TTTCTGCTCGATGCC  63 282
APY29_RS12580 NONE
APY29_RS12585 2808935 .. 2808949 + -12.8  -4.91109   GTGCTGAGGCGCGAG               GCGGCC ATT GGCCGC               TTTTTGTCGTGCCCA 100 50
APY29_RS12600 2812635 .. 2812658 +  -2.2  -2.65774   ACTCTCCCTAGTGCG          GCACGTCGCA TGAG TACGCCGCGC           ATTGTGGTGGGTGTG  38 13
APY29_RS12605 NONE
APY29_RS12610 2814417 .. 2814453 +  -8.7  -3.05384   GAAAACCGCTTACAT   CTGCGCGCTGGCG-GCC GCTGA GGCGCGCCAACG-GCGG   TTGAATGGACCAGGC  57 48
APY29_RS12615 2815767 .. 2815784 + -12.7  -4.07975   TGCTGATTCCGACAT             TCCCCGG CCTT CCGGGGA              TTTGTCGTTCCGTTA  86 61
APY29_RS12620 2816116 .. 2816147 + -13.1  -2.70022   AAGCCCAGCGCCGTA     CAGCGGGGCGTGCCT CGGC AGGC--GCCCCGCTG      GTTGTCTCCACTGCC  68 39
APY29_RS12630 2822081 .. 2822101 +  -9.7  -3.11634   CCCGGTCGGCGAGTC            CGTCCACGA CGA TGGTGGACG            TTGAGTCATGTGGAG  61 1
APY29_RS12635 2824079 .. 2824098 +  -4.2  -3.78775   ATCGACAGACCCAGG            CCGGTGCCG CTG CCG-ACCGG            TTTGGTGGTGAAGAA  57 274
APY29_RS12665 2828092 .. 2828112 +  -5.3  -3.01712   CCGTGCAGTCGCTGA            GCCGCGG ACATCTC CCGCGCC            TGTTCCCGCACAAGG  47 54
        flgB NONE
APY29_RS12675 2829181 .. 2829193 +  -9.1  -3.18383   CGCGACCCTCACCAT                GGGTC GCT GACCC                TTCCTAGCTGACCCT  61 16
        flgD NONE
APY29_RS12685 NONE
        flgF 2832084 .. 2832142 + -13.6  -3.98083   CGCACCGTCGGTTGG CTCGCCGCTCTGCCGAGCACCTTGATGG CCG CCGCCCGGGTTCGCTGCAGAGCGGCTGG TTTGTGACTTGGCTG  90 61
APY29_RS12700 2832742 .. 2832752 +  -4.6  -3.53091   CACACCCGGCAGAAA                 TCCG ACG CGGG                 TTTGGCACGGCACGT  53 265
        flgG NONE
APY29_RS12710 NONE
APY29_RS12715 NONE
        flgJ NONE
APY29_RS12725 NONE
        flgL 2839770 .. 2839804 +  -4.9  -4.85782   CTTGGGCTTTCTTCG    CTCC-TGCGGGTGCGC ACTT GCGCAGGCGGACGGAG     TTTATTTTTCGAAGA  80 56
APY29_RS12735 2841309 .. 2841326 + -12.7  -5.24129   CGCAGCAAGTCCAGA             GCCCCTC TTCG GAGGGGC              TTTTTTGTGGCCGCA 100 77
APY29_RS12740 2842876 .. 2842886 +  -3.2  -3.04144   ATGACGATCCTCAAG                 TCCT GTC AGGG                 TATTGCCGATACAAG  43 49
        fliS 2843395 .. 2843408 +  -5.2  -3.77196   CCCCCTCGAACAACG               CGGC CTTACC GCCG                TTTCGTGAGTCCTGC  58 4
APY29_RS12750 NONE
APY29_RS12755 2844301 .. 2844325 +  -3.5  -3.72695   CCGATGGTTGGCGCG          GGGCGCC GGGTCGGCTAA GGTGCCC          TTTACTGAAAAAGGT  54 42
APY29_RS12760 2845150 .. 2845160 +  -5.4  -3.08642   CCCGTCGCGTTGTCC                 TGCA AGA TGCA                 TTCCATCGCTGCTGT  47 190
        rpoN NONE
APY29_RS12770 2846988 .. 2847008 +  -3.9   -3.1372   GACGGAAGGAGCCAG            GAATGAGTG AGT CCCGCATTC            TGTTGATCGACAGTG  47 16
APY29_RS12775 2848499 .. 2848511 +  -5.5  -2.60075   CGCTCGGGTTCGGCT                CGCTG GCA TAGCG                CTTGCTTCAGCAGGA  46 50
APY29_RS12780 NONE
APY29_RS12785 NONE
APY29_RS12790 NONE
APY29_RS12795 NONE
APY29_RS12800 NONE
APY29_RS12805 NONE
APY29_RS12810 NONE
APY29_RS12815 2854915 .. 2854928 +  -5.3  -2.71712   GCTACGACACTCCAA               TCCAT GTTT ATGGA                ATTTAAGCCAGGGAC  44 6
APY29_RS12820 NONE
APY29_RS12825 2856620 .. 2856633 +  -5.2  -3.83568   ATGAACACTCCTCAT               GGCC TTGATC GGCC                TTCTTGTAAGTGTCC  60 270
APY29_RS12835 2857473 .. 2857485 +  -7.7  -2.53271   CAGGGCGGGGGGACG                TCGGT GAC ACCGA                ATCTTGTCAGCATCG  50 55
APY29_RS12840 2861392 .. 2861411 + -10.6  -2.71712   CGACAGAAACGTACC            CGCGCCGG AATC CCGGCGCC             ATTTCGGCACGCCGC  60 417
APY29_RS12845 NONE
APY29_RS12850 NONE
        fliG NONE
APY29_RS12860 2865174 .. 2865184 +  -4.6  -2.87344   ACGGTCATGCGCAAA                 TCCG GAG CGGG                 TCTGTGAGCGCCCTG  46 8
APY29_RS12865 NONE
        fliJ NONE
APY29_RS12875 2868383 .. 2868410 + -14.1  -4.98531   CGATGACGCCCCTCC        ACCCCCGCAGC GCAAGG GCTGCGGGGGC         TTTTTGGTTTCCACA 100 96
APY29_RS12880 NONE
APY29_RS12885 NONE
        fliN NONE
        fliO NONE
        fliP 2871826 .. 2871847 + -11.5  -4.56597   CAAACCCCGCAGGGG           CGGCGCGCA TGGA TGCGCGACG            TTTTTCAAAGGGACA  95 211
APY29_RS12905 2872716 .. 2872748 +  -4.8  -2.59431   GCTGTTCCAGCGCAT     TCCGCATCTGATCGG CTAG CGGGCCAGA-GCGGA      TGGATTCTGCAACCC  43 7
        fliR NONE
APY29_RS12915 2876683 .. 2876728 +  -2.3  -3.05463   CTGGACACGCTCGAT CAGGTGTGACG-GCAGCGCAGG TGA CTTAAGCCGCGCGCCGCACCCG TTCAATGCGGACGCT  41 17
APY29_RS12920 NONE
APY29_RS12925 2880121 .. 2880150 +  -2.1  -3.53012   CCGGCTGCGTACGCG       GGCGGC-CGC AGGACCTTGAA GCGTGCCGTC       TTTGGCGGCAACGCG  47 156
APY29_RS12930 2882390 .. 2882400 +  -8.2  -3.09492   CGCCACCGGTTCACC                 GCGG CCC CCGC                 TGTTCCGATTCCCCA  57 66
        flhB NONE
        flhA 2885848 .. 2885859 +  -7.2  -3.57144   GTAGGAGCGCACCTG                GGCG CGAC CGCC                 TTTACCGGTACGGCC  62 152
        flhF NONE
APY29_RS12950 NONE
        fliA 2889813 .. 2889827 +  -2.8  -3.50491   CTGGCCGATGCCGGT               GTCG AAATTGA CGAC               TAATTTTTTGTGTTA  49 8
APY29_RS12960 NONE
APY29_RS12965 NONE
APY29_RS12970 2892652 .. 2892682 + -23.4  -3.64822   GGATGCCTGATCTAA       CGACAACGGCCGCG TAC TGCGGCCGTTGTCG       TTTCACTACCAGCAT 100 145
APY29_RS12985 2894758 .. 2894792 +  -7.9  -4.18197   CAATCTCGGCTTGAG    TTGGGGTGCAGATCGT CCAG ACGA-CTTCCCCCCAA     TTTTGAGTAGCACCT  72 259
APY29_RS12990 2896164 .. 2896174 +  -6.8  -4.11394   CCAGCTGAATGACTT                 GCTC GGA GAGC                 TTTTCCAGATCCACT  67 240
APY29_RS13000 NONE
APY29_RS13005 2897414 .. 2897443 +  -9.3  -3.36878   ATGGCAGGCGTGATG       CCGCCGAGCGCC ATATTCG GGCGCTCG-TGG       TTGTACGTCCATAGC  63 96
APY29_RS13030 2902568 .. 2902593 +  -9.8  -5.61596   AGGGCGGGGGGACGT         CGACAGGCCTC AGTTC GAG-CCTGTCG         TTTTTTTATCCGCCT 100 56
        motC NONE
APY29_RS13065 NONE
APY29_RS13070 NONE
APY29_RS13075 NONE
APY29_RS13080 NONE
APY29_RS13085 NONE
APY29_RS13090 2916079 .. 2916132 +  -8.8  -3.14564   CGCGTAATGCAGTCG CCG-CG-GCGTGGATGCCGCGGCGCA AGAC TCCGCCACGCCATCGACGCACGATGG TTGCTGGAGCGATCG  58 34
APY29_RS13095 2918648 .. 2918669 + -17.3  -5.40072   GACCAACATGAGCAA           GCCCCGGCA GCAA TGCCGGGGC            TTTTTTTGGCGAGAA 100 73
APY29_RS13100 2919907 .. 2919939 +  -6.3  -3.09492   CCGCAACCCTGCGGT     GCG-CCCGGCTC AACATTTTCG GAGTCGGGTCGC      TATTCGACTTACGCC  51 480
APY29_RS13105 2922170 .. 2922185 + -11.8  -3.75824   CACTGATCGCAGACG              CCCCGC TACG GCGGGG               TTGTCTTCTCCGCTC  78 35
APY29_RS13110 2925003 .. 2925013 +  -2.4  -2.91276   TGCCGTTAACGACAG                 CCAG TGG CAGG                 ATTTCTAACCGCCCC  40 7
APY29_RS13115 NONE
APY29_RS13120 NONE
APY29_RS13125 2928570 .. 2928591 +  -5.7  -3.65827   ACAGCTGTATTGCAG           CGTTGGCCG GAAT CGGCAGGCG            TTTGCGTACGCATTA  57 129
APY29_RS13130 2931065 .. 2931086 + -17.3   -5.4833   GTCGCCGCCATGCAA           GCCGCGCTC TCTG GAGCGCGGC            TTTTTTATTGCGTCG 100 145
APY29_RS13135 2933728 .. 2933772 + -22.2  -2.79684   TCGTTGCAACACGCA GGGCCCGACCAAGCGCATGC CACCC GCACGCGTTTGATCGGGCCC TCATTGCATTGATGG 100 113
APY29_RS13140 2934180 .. 2934234 +  -3.3  -3.64703   CAGCGCCAGGCGTCA C-GCGGCCGTCCCCCGCTTGCAG-CGG GTG CCGACCGTGATCGCGAGGCCGCCGCCG TTTGCCTCGAACCGC  51 113
APY29_RS13145 2936554 .. 2936569 +    -9  -2.52676   ACTGAACTGGACGGA              TCGGCA GCGC TGCCGA               TCCATTAAAGGCGTA  56 58
APY29_RS13150 2939126 .. 2939156 + -11.9  -2.50816   GGCGGTCGATCTGCC      CTGGGACGC-TGCG CGCA CGCATGCGTCCCAC       CTTAGTGACTGCCCG  65 48
APY29_RS13155 2941949 .. 2941959 +  -2.4  -3.41602   GGCAGGAATTCTAAT                 CGCC TCA GGAG                 TTCTGATCGCATCGG  47 27
APY29_RS13160 2944828 .. 2944858 + -23.4  -5.60993   CTCCGCAGATCTTGT       GGGCCGCTTCCCTT GCG AGGGGAAGCGGCCC       TTTTTTTGTGCCGCC 100 230
APY29_RS13165 2948114 .. 2948142 +  -3.8  -3.19389   TTGGCCAGTGGTTTG       TTGACGAGCGAGG GACA CCTCG-TCGGCGG        TTGCTGGCTGGCTTC  47 195
APY29_RS13175 2948376 .. 2948392 +  -4.3  -3.37344   AAGAACGAAGACTTC              GCGCCAG ACG CTGATGC              TTGCTTGGCTGAACG  48 40
APY29_RS13180 2949320 .. 2949336 +  -2.9  -3.30124   ACCGCCAGCGCAATG              CGCGC AAGAGCG GCGTG              TTCTGAACCCTCGCG  46 3
APY29_RS13185 2949952 .. 2949970 +  -4.4  -2.89683   CAACTGGTCGAAGAA             GCCGCCTG ATT CAAACGGC             TGTGTCGCCTCGCCT  44 17
APY29_RS13190 2950806 .. 2950839 +   -19  -3.05343   TCAAGTAATCGCCTC     GCATATCGCCACGC CCTTGC GCGTGGCGATGTGC      TGTTGCGGCTATGCG  91 33
APY29_RS13195 2953277 .. 2953311 +   -20  -3.53012   GATTCACCGCTGTCA     CCCACAACGCCCCGGC ATT GCCGGGGCGTTGTGCA     TTTAGGCCAGGCACC 100 39
APY29_RS13200 NONE
APY29_RS13205 NONE
APY29_RS13210 NONE
APY29_RS13215 2958491 .. 2958503 +  -3.3  -3.05384   TCCTGCAGGAGAGCA                GCGCT GCA AGCCC                TTCCCTACGAAAGAG  43 109
        acnA 2965931 .. 2965951 +   -14  -3.58533   GATGCAACGCACTCC            CGCCGCTC GGCGG GAGCGGCG            TTTCAGGCCTTGTGA  81 65
APY29_RS13250 2968553 .. 2968589 + -18.2  -3.15861   TGCCGAAGATGCACA   C-CAGAGGGCTTTCCCG GCGA TGGGAAAGCCCTCTGCG    TTCATGGAGATAGTG  91 74
APY29_RS13255 2969589 .. 2969607 + -17.4  -3.72576   TACTGGGGGAATCAG             GCCCGGCC GAT GGCCGGGC             TTTGCTCAGCCCGAA 100 57
APY29_RS13380 NONE
APY29_RS13385 3002970 .. 3003006 +  -4.4  -3.17219   TGGCGATGCCTGTAC   G-CGGTCATGCGCGCCGC GAT GTGA-GCGCATGAGCGAC   TTCGTCCGCATTGTC  47 104
APY29_RS13390 3003963 .. 3003984 +  -2.1  -3.53012   TTGGGCTAGAATGGC           CGGCCGCTC CGCC GATCGTTCG            TTTGCCGCCACCACC  47 94
APY29_RS13395 3004856 .. 3004866 +  -8.2  -4.74103   CCTGCTCTCAGCACC                 CCGG ACC CCGG                 TTTTTCGATTCCCCA  88 81
        yeiP 3005452 .. 3005482 +  -5.4  -3.41051   CACGGGCGAATTTGC      CGGTCGCGCCGAC TGATGC GTCG-CGTGGCTG       TTGTCGTGGCCGTGG  53 10
APY29_RS13405 3005935 .. 3005946 +  -7.2  -2.59135   TCAGGACTCACAGCT                GCGG ACTG CCGC                 CCTTTCTTTCTCGCC  51 107
APY29_RS13425 3011118 .. 3011129 +  -5.8  -4.15222   TCACCGGCACCTTGC                GGAC ACGG GTCC                 TTTATTAAGCGGGAT  67 6
APY29_RS13435 3013507 .. 3013527 +   -14  -3.97709   CTGACCTTCTCTCAA            GACCGGCG CGCGA CGCCGGTC            TTCTTGTTCAATGAT  90 37
APY29_RS13440 NONE
APY29_RS13445 NONE
APY29_RS13450 NONE
        mtnC 3017133 .. 3017150 +  -4.9  -2.99471   CTGAGATGTTCCAGC             TGCTATGC GCC GCAT-GCA             TCTCTGTCGGGGTGA  47 110
APY29_RS13460 3018444 .. 3018462 + -11.7  -4.23674   GCCCGGATCCCAACA             CGCCTCC CTTGT GGAGGCG             TTTGTGTTGGTGGCG  86 163
APY29_RS13520 3030634 .. 3030657 +  -8.8  -3.05384   GTCGGTGCCGCTCGG          CAGCGCTCGCC TGA GGCGA-CGCAG          TTGCGTGCAGGCAGC  57 178
APY29_RS13535 3033868 .. 3033878 +  -8.2  -3.54543   TGCCAAGGCTTCGCG                 CGCG CGC CGCG                 TTTCCAGCACTGCAT  62 472
        pgaA NONE
        pgaB NONE
        pgaC NONE
        pgaD 3059009 .. 3059026 + -12.7  -3.51232   GAAGACCACGTGGCA             GGCCTGC GCAG GCAGGCC              TTCGTTTACGAACAC  76 66
APY29_RS13600 3061185 .. 3061195 +  -4.6  -3.53012   GACGCACGCAACCCG                 GCGG TTC TCGC                 TTTCGCGGCAGCGGC  52 126
APY29_RS13610 NONE
APY29_RS13615 NONE
APY29_RS13620 3063700 .. 3063718 +  -6.6  -3.30124   CCGCGAAGCACCCAG             CGGCGGTG CGG TGTCGCCG             TTATGAGCGATGCAG  55 1
APY29_RS13625 NONE
APY29_RS13630 NONE
APY29_RS13635 NONE
APY29_RS13640 3066592 .. 3066602 +  -6.8  -3.72576   GCCAGGCCTGATAGG                 TGCC ATC GGCA                 TTTCATCGCCGAAAA  62 95
APY29_RS13645 3068115 .. 3068125 +  -2.4  -3.26609   GTCACGCCAGCCTGG                 CAGC TGT GCAG                 TGGTTTTGTTAGCTG  45 140
APY29_RS13665 3070409 .. 3070432 +  -3.8  -3.53444   GCTCTAGGCCGATGC          GACGGTTTGTC GCA GGCC-ACCGTC          TTTCCAAGCGCATAG  51 44
APY29_RS13670 NONE
APY29_RS13675 3072630 .. 3072647 +  -9.8  -3.15544   GTTGTAGTCGCGCGC             GCGGCG CATGAT CGCCGC              TTCGTCCACGTGCGC  62 408
APY29_RS13690 3075888 .. 3075927 + -14.8  -3.54543   ACGGCAGGCTGTCAA  CGCAGCGCGGCACGACAC CAAG GTGCCACGCCGCGCGGCG   TTTCAAGACATCGCT  85 168
APY29_RS13700 3077936 .. 3077963 +    -9  -3.22475   ACGCCGACCACTTTC        CACTGGCCTTGC GGCA GCGTGGCCAGGG         TCTTCTGCGCATCGA  61 190
APY29_RS13710 3082760 .. 3082774 +  -4.2  -3.16068   CGTGCAGTTGAGCAA               GGCG TAAGCGC CGCC               GTTTTGCGTTGCGGC  47 19
APY29_RS13760 3090211 .. 3090227 + -15.1   -4.3208   CTGCAAAACGCCAGA              GCCCCGC ATT GCGGGGC              TTTTGCGTTGTAGCG 100 53
APY29_RS13775 NONE
APY29_RS13780 3093949 .. 3093982 + -12.5  -3.79505   GGAATGTCAAAACTA     ATGCATGGCGGCGATG AAA CAT-GCCGCCATGCGC     TTTCAATCTTGCTTT  81 68
APY29_RS13845 3119355 .. 3119387 +  -9.8  -2.77962   TCGCGCAGCCTCCCC     CGAC-GTTGCCGGCC CTCC GGCCGCCAACCGCCG      CTTTCCGCTCTACCG  60 152
APY29_RS13850 NONE
APY29_RS13855 NONE
APY29_RS13860 3122083 .. 3122102 +  -7.8  -2.52464   TGCCCGAAACTCGGG            TGGCGAGC GCGT GATCGCCA             TCGATTGGGGCACCA  50 12
APY29_RS13865 NONE
APY29_RS13870 3123462 .. 3123480 + -17.4  -4.34402   CGCACTAACGCAAAA             CGGGCGCC CAA GGCGCCCG             TTTTGCTATCCAGCA 100 109
APY29_RS13885 NONE
APY29_RS13890 3126012 .. 3126056 +  -8.5  -3.59979   GTGGCTGCTTATGAT G-GGATGGACGT-CGGCCCGG CATGA CCGCGCCGTACGCCCCTCCAC TTTGGGCTGAGCAAC  65 2
APY29_RS13895 NONE
APY29_RS13900 3128011 .. 3128029 +    -3  -3.40522   GCGCTCGCGTCTGGC             CGACTTCG CTT CGGAGGTG             TTGTGATGCGCGCAT  49 1
APY29_RS13905 NONE
APY29_RS13910 NONE
        thiD NONE
APY29_RS13920 3130950 .. 3130972 +  -3.2  -2.55015   CATCCGCATAATTCC           GCTCCTGACG AGG CGCCCGTAGC           TCAGTTGGATAGAGT  39 63
APY29_RS13925 3131059 .. 3131074 +  -4.6  -4.74103   AGAACAAGAAGAAGA              CAGCAC TCAC GCGCTG               TTTTTAAGTTAAAAA  78 46
APY29_RS13930 3131225 .. 3131240 +    -9  -5.76949   AATCTTGAAGAAAAC              GACCAG CTTG CTGGTC               TTTTTTTTACCCGTC 100 40
APY29_RS13945 3134272 .. 3134287 + -11.8  -4.27117   GCCGAAGCAAACAAA              GCCCGC GTAC GCGGGC               TTTGTCTTGTGCGCA  91 101
APY29_RS13980 3141867 .. 3141886 +  -9.2  -2.53213   CCAGCCGGGTCGCAA            CCTGCGGG TTGT CGCGCAGG             TAGGTTCGCGCGTTG  54 132
APY29_RS14035 NONE
APY29_RS14040 3153966 .. 3153976 +  -8.2  -3.61268   GCGCCCCCAGATTGC                 CGCG GCG CGCG                 TTTCCCCATTCCCTA  65 152
APY29_RS14065 3157591 .. 3157615 +  -5.6  -3.39556   GGAAAGTCTTTCGCG          CATGGCTCGC CTGAT GCGAACCAAG          TCTTGTTGCGCCCTT  55 102
        parE 3167939 .. 3167957 + -13.8  -2.52676   CGAGAAGGCACGGGT             TGCGCGCC ATT GGCGCGCG             TGCCTTGGAGCGCTG  71 79
APY29_RS14120 3169855 .. 3169880 + -16.1  -2.52464   CGCTGAGCACCACCA         TCGCCGGCCGC ACAC GCGGCGGGCGA          TGCATTACGCCAGCC  79 35
APY29_RS14140 3173014 .. 3173028 +  -4.2  -2.86773   CTCCCCTTCACTGAC               CGGG GAAGACG CCCG               TGGTTGAGTTTTTGA  44 4
APY29_RS14145 NONE
APY29_RS14150 3175000 .. 3175039 + -14.2  -2.52464   CTGATTCGCGATTGG  TG-GCCGGACGCCTAGCGC TGA GCGCAGCGCGTCCGGCGCG  TCGCTTGCGACGCGG  74 11
APY29_RS14165 3178499 .. 3178521 +  -7.6  -2.98823   GCGGATCAATGATCA           GCCGGCGGAT CTG ATCCGCCACC           TCTCTATCGCCGCAG  54 142
APY29_RS14180 3183130 .. 3183160 +  -3.8  -2.71011   CGTCAGCCACGGCAA       CTGAGCGCCGTCCT GGT AGGCTAGCGCTCGC       TCGTTCCCACACCGT  42 22
APY29_RS14185 3184923 .. 3184947 +  -5.5  -2.87132   AGCCGAGCTGCTGCA          CCAGGCGCTGC ATG GCACCGCCCAG          TGTGTCGACGCCCAC  46 525
APY29_RS14265 3199462 .. 3199474 +  -2.6  -2.73771   CTTGCCGGGCAAGCA                GGCG TGAAC CGTC                ATTTCCAGCCTGTGA  39 19
APY29_RS14270 3200874 .. 3200886 +  -5.5  -3.30124   CAGCTTCACCCTGTC                GGTCA ACC TGGCC                TTCTGACCCCTCCCG  52 7
APY29_RS14275 3201718 .. 3201736 +  -9.5  -3.22298   TCGGCTAATCTAACA             GTGCCCG AAGTG CGGGCGC             TTACTGATGGATCAG  61 432
APY29_RS14290 3204517 .. 3204540 +  -3.2  -2.57344   AAATGAGCTAACTTT          TTGTCGGAAA AGGG TTTTCGAGAA           GTTCTACCGACCCTC  39 350
APY29_RS14295 3205840 .. 3205892 +  -9.3  -3.05844   GAAGTGGGGGGATTA CC-CGATGGCG-A-TGCGCCAACGCA AGAA TGCGCTCGCGCAGTTCGCCATTGCGG TCTTGGCGTGGGCAA  60 62
APY29_RS14305 3206948 .. 3206964 +  -5.1  -4.15044   GCGGCAATGCCTTCG              GCAGC TGCGCTT GCTGC              TTTCTTGCCGAAACC  64 203
APY29_RS14325 NONE
APY29_RS14330 3211734 .. 3211761 +  -7.6  -3.78934   GGCAGAAAGCACAAA        GCCTAGGACCCT GGCA GGGGAACTAGGC         TTCTTGTGGCAAGCA  65 57
APY29_RS14335 3213054 .. 3213112 + -10.8  -2.78679   CCAGTAACCCTCTAC GTTAGTGCGCGGGCTGTTCCGCCGGATG ACC CTTCCGGCGGAACAGTGAGCCTGCAGGC ATTTGCGTACCCGCA  60 34
APY29_RS14345 3213797 .. 3213841 +  -7.2  -3.53012   ATTGCGCCCACGCGG GCT-TCTACGTGGGCGCACTGT CGG ACAGTGC-CGCACGTCGCCAGC TTTGCGAAGCGCGAC  60 107
APY29_RS14350 NONE
APY29_RS14355 NONE
APY29_RS14360 NONE
APY29_RS14365 3217240 .. 3217253 +  -3.1  -2.57985   CTCCAACTGACGGCA               C-TGGC ATG GCCAAG               TGGATTCCCTTGTGG  39 31
APY29_RS14370 NONE
        ccmD NONE
APY29_RS14380 3218695 .. 3218711 +  -6.5  -3.20617   TGCGGTCATTGCCAC              GCACGTC GAT GACGTCC              TCTTCCGTTTCACCT  53 47
APY29_RS14385 NONE
APY29_RS14390 NONE
APY29_RS14395 NONE
APY29_RS14400 3222658 .. 3222683 +  -9.7  -2.87132   CGCATTGCAGCCTCT         CGCGCCAGCGTG CCC CA-GCTGGAGCG         TATCTACCGAAAAGG  58 231
APY29_RS14415 3226411 .. 3226424 +  -4.5  -3.07962   TGACCAGGGCTGCAG               CGGTG CACG CATCG                TGTTGCACTGTCCCA  45 45
APY29_RS14420 3227273 .. 3227285 +  -6.9  -3.64822   CGCTCCACCGCCGCA                CTGCC CTC GGCGG                TTTCGATCACGCGGT  61 412
APY29_RS14430 NONE
APY29_RS14435 3230796 .. 3230809 +  -3.9  -3.72695   GGGCAAGACGTGTAA               TATCA TGCC TGATA                TTTCCTGCCCCGGGT  56 26
APY29_RS14440 3232200 .. 3232238 +    -8   -3.2794   AGACACAACTAGAGC   GGCGGGCGTTGCGCTG GCTCCTG CAGTGTCGCGCGCGCC   TTCGTCTCCCTGCAG  58 203
APY29_RS14445 3234730 .. 3234751 + -15.1  -2.66435   GTCGCCTGCTCCAGC           CCGGCGCCG AAGT CGGCGCTGG            TCATATGGTCGGCAT  71 339
APY29_RS14465 3237671 .. 3237690 + -13.6  -5.86965   GCCGTAAACGAAAAA            CGGGACCA GCGC TGGTCCCG             TTTTTTTTCGTCAAT 100 92
APY29_RS14475 3240325 .. 3240347 +  -6.2  -3.15861   TGGCGAGCGACGGCG           CGTCGCCC TGGATGT GGGCAACG           TTGGTGGCGCTGCTC  51 370
APY29_RS14480 3240792 .. 3240824 +  -4.1  -4.62069   CCGGTGGAATTCACC     G-CGCAGCGGTAAG GAGTTG CTCAGCGCTGCGGC      TTTTTGCCCTCAACG  72 14
APY29_RS14500 NONE
APY29_RS14505 3246627 .. 3246680 +  -3.7  -3.12351   CCAGGGCCAGCGTGC CACCT-TCACCGGTGCGCG-CGTCG GCTCTG CAACGGCGCGCGGCGGCGGCAGGGG TTCGGTATCGGGCAG  47 48
APY29_RS14515 3247880 .. 3247906 +  -5.1  -2.73364   TGCTTCAGCCTCAAG        TC-ACCTGCTCG GGCG CGTGCGGGTAGA         TCCTTCCAGTCCGCC  44 61
APY29_RS14520 3248586 .. 3248609 +   -16  -3.28712   CAACGGTGAAAGCAA          CCGCGCTGTC ATGG GACGGCGCGG           TTGTCGCCCAGGACG  88 44
APY29_RS14525 NONE
APY29_RS14545 NONE
        hutH 3255558 .. 3255573 +  -4.6  -3.74077   TACCTGCATCGTCGC              GGTCGC AACT GCGGTC               TTTCGCTATCTCCCC  58 68
        hutG 3256540 .. 3256551 +  -7.2  -2.70932   GACACCGCGCCGCCT                GCGG CCAA CCGC                 TGATTGCAAGGAACC  52 11
APY29_RS14560 3258384 .. 3258402 + -10.3  -2.87132   TCGGATCCTGTGCGC             CGGCAAC ATGTC GTTGCCG             TGTCTGAGCACGACG  61 171
APY29_RS14565 3259411 .. 3259430 + -10.7  -4.81083   TTCTTCAGCGAAAAA            GCGCACC ACTTGC GGTGCGC             TTTTTCATGCTTCAA 100 205
APY29_RS14585 3266632 .. 3266644 +  -9.1  -4.72029   ACCGACACGCCACAG                GTGCG CCG CGCAC                TTTTCTTCGATTCGC  91 154
APY29_RS14605 3272001 .. 3272032 +  -5.1  -2.85351   CCTCAGCCATCAGTC      GCAGGATCTGCGC CGCGCT GTGTGGATGCTGC       TGTCATCTGAAGCCA  46 69
APY29_RS14610 3273052 .. 3273064 +  -3.3  -3.85698   TCAGGTTTCCCCTTG                GGACG TTG CCTCC                TTTATGGGGGGAGAA  56 54
APY29_RS14650 NONE
APY29_RS14655 NONE
APY29_RS14660 3281948 .. 3281962 +  -2.7  -3.40052   CGCGCACTACTGCTG               GCGGC CACAT GACGC               TGTTCTTCGCACTGT  47 14
APY29_RS14665 NONE
APY29_RS14670 NONE
APY29_RS14675 3283289 .. 3283330 + -10.1  -2.71011   GGCCAGGCCGACGGC CGACACCTGCAACGACCTG CGCA CAGGTCATTGCAGGACTCC  TACTTCACCAGGGAT  60 93
APY29_RS14680 3284951 .. 3284962 +  -3.6  -4.25256   ACCGGAAGATAGCGG                CGGC CATT GTCG                 TTATTTTGGTGCACA  65 368
APY29_RS14690 3285406 .. 3285430 + -17.2  -2.84051   TAGCGGCTCTTGATG          CGCAACGGCG TCTGC CGCCGTTGCG          GTTTGATGGACGTGA  87 34
APY29_RS14715 3289694 .. 3289705 +  -7.2  -3.73775   ACAGGGGTGCCGTTT                CGGC CTGC GCCG                 TTTGCTCACCATCCA  61 342
APY29_RS14745 3292815 .. 3292827 +  -4.7  -2.60309   ATCGCACATCGGCGG                CCGAC TGA GCCGG                ATATCTTCTTTGCCG  43 73
APY29_RS14750 NONE
APY29_RS14755 NONE
        kynU 3296992 .. 3297009 +  -9.1  -2.71681   TGTCTTCCCCTTTTC             GCCGG-CG CTG CGTCCGGC             TGCTTCCGGACATTG  57 144
APY29_RS14765 3298491 .. 3298506 +  -3.2   -3.0634   GGATGTCTCTTCGGT              GCGGTT TGTT AGCTGC               TCTTCGCGTGGCGTT  43 122
APY29_RS14770 NONE
APY29_RS14775 NONE
APY29_RS14780 3301332 .. 3301342 +  -5.4  -3.07962   ATGGCCTCGGCTCCC                 TCAG TCA CTGA                 TCTTCACCTGTCGCG  47 47
APY29_RS14785 3302423 .. 3302434 +  -3.6  -3.31322   AGCTGCGTTGACAGC                CGGC TTTC GTCG                 TTGTCCACGATTGCC  47 513
APY29_RS14830 3310368 .. 3310386 +  -3.8  -3.57971   GTAGAAACCGGACGA             CGCCTG CATCCGA CAGGTG             TTTGCCGGTCCATCT  53 50
APY29_RS14855 NONE
APY29_RS14860 NONE
         nth 3316458 .. 3316479 + -12.9  -3.56594   CGATCACGATGGGGT           CACCCGGCG CGAA CGCCGGGCG            TTTACGACACTTTAC  77 192
APY29_RS14885 3320775 .. 3320825 +  -9.8  -3.14132   CAGTTCTACTGGTAA GT-GCGTC-GCTGTCGCGTGCGCTC GGTC GAG-GCACGCGGTGGCAGCCGCCAC TTCCTGCCGGCCCGA  64 26
        pstS 3322180 .. 3322222 + -27.8  -5.67063   CGGCGTCGGCCCCGG GACGCGGATCCCGGAGGGTG CAA CGCCCTCCGTGGTCCGCGTC TTTTTTTGTGATGCG 100 224
        pstS 3323458 .. 3323485 + -19.2  -3.26545   CGGCGGGCTGCGCTG        CGGCGAGGTACC TGAA GGTGCCTCGCCG         TTCCTGCTGTCTCAC  93 60
        pstC NONE
        pstA NONE
APY29_RS14910 3326216 .. 3326228 +  -2.6  -3.25823   CCGAGGACTACATCA                CCGG CCGCT TCGG                TTGATGTAAGGCGCG  45 9
        phoU 3327093 .. 3327106 +  -5.2  -3.53767   GCAGCGCTGCCGTGA               GGCG CCGGAA CGCC                TTCTCATTACGTATT  55 47
APY29_RS14920 3327616 .. 3327643 +   -17  -3.57908   CGTGTCGTCAGTGAG        GCCCGGTCCGTG GCAA CGCGGATCGGGC         TTCTCCTATTTGGTG 100 53
         rnt 3328610 .. 3328622 +  -9.1  -3.16683   CCGTCTGATCACGAC                GCAGC ACT GCTGC                TTGCTGCCGTACCCT  61 146
APY29_RS14955 3338116 .. 3338137 + -12.3  -3.64915   GCACCAGTTTAAAAA           GACCTCCGA GCAA TCGGGGGTC            TTCTGGTTTCTGCGG  75 35
APY29_RS14965 3340178 .. 3340198 +  -6.1  -3.72678   TCACCAGGCGCTGGA            TTTCCGAGG TGC CCTCGTAGA            TTTCGGTGATCTTTG  59 187
APY29_RS14985 NONE
APY29_RS14990 3343983 .. 3344028 +   -22  -3.17075   TCACCACGACCGATC GCGCCGCGC--ACCTTCTCCCG CTGG CGGGAGAAGGACAGCGCGGCGC TTGGATTGCCGCAAG 100 239
APY29_RS14995 3347179 .. 3347235 + -32.6  -2.62184   GCAGATATCGTAGGA GCGCACCCGGGCGCGATGGGGGTCTTA TCGG TAA-AGCCTCATCGCGCCCGGGTGCGC TCCTGTGCGGCAACG 100 56
APY29_RS15050 NONE
APY29_RS15055 NONE
APY29_RS15060 NONE
APY29_RS15065 NONE
APY29_RS15070 NONE
APY29_RS15075 3361541 .. 3361560 +  -5.6  -4.11216   TGCCCTGCGACATTT            TGGCAGGC ACTG GACTGCCG             TTTTGCCGATCCGCA  67 309
APY29_RS15080 3362037 .. 3362049 +  -4.7  -3.18681   CAATGTGCAGGCCGA                GCGGC ACT GACGC                TTAGTCGGCTTGGCC  48 16
APY29_RS15090 3365667 .. 3365702 + -11.8  -3.65522   AGAAACGGATCCAGC    AGCCAGCGCCGGTG CCCCAGTC CACCGGCGCTGACA     TTGTTGGCGTCGGTC  75 514
APY29_RS15100 NONE
APY29_RS15105 NONE
APY29_RS15110 NONE
APY29_RS15115 3371077 .. 3371098 +  -5.7  -3.18031   GTCAGCTTGCAGACG           CCCCCTCAC TAGC GCAAGGGGG            TATAATTTTTCGAGA  51 93
APY29_RS15120 NONE
        sucB NONE
        lpdA 3376920 .. 3376945 + -19.1   -2.5409   CTTCACTCTTCATGC         TGACGCCGGAC CCAG GTCCGGCGTCA          TGCGTTCCGGCTTCT  87 90
APY29_RS15135 3377610 .. 3377620 +  -2.4  -3.03124   CTGGTGTAAGCGTTA                 GCCG CCC CGTC                 TCTTCGACGCTGCGG  41 32
APY29_RS15140 NONE
APY29_RS15145 NONE
APY29_RS15150 NONE
APY29_RS15155 NONE
APY29_RS15160 NONE
APY29_RS15165 3385618 .. 3385633 +    -6  -3.28791   GCGGACGCGGTGATG              CCGGGC AATT GCGCGG               TTGTGCGAGCGACCT  52 60
APY29_RS15170 3386383 .. 3386419 + -10.7  -3.32268   CAATTTTTGACCAGC    CACCGCACACCCCTTGC GCT GCAAGGGCTGCGCGCAG    TTATCCACATGCTTG  69 179
APY29_RS15185 3389201 .. 3389228 +  -6.3  -3.53444   CGTACGCCCTTGCCG        CGCAGA-CGGAA CAACT TGCCGGTCTGCG        TTTCGGCCGGGATGC  56 411
APY29_RS15210 3396123 .. 3396144 + -15.9  -2.72344   CCGCCCCACAACGGA           CAAGGCGGC CGAA GCCGCCTTG            TCATTCGCACTAGCG  78 354
APY29_RS15220 3397130 .. 3397151 +  -7.3   -5.0925   CTGACCGGACCAAAA           CGCATCC CCTTAAAC GGATGCG            TTTTTCGTTTTGCCG  93 69
APY29_RS15235 3398940 .. 3398963 +  -5.2  -2.62616   GCACGCCGGAGACAT          GCGGTG-CGGC CAT GCTGGTGCCGC          TCATCTCCACCATCA  44 324
        ssrA NONE
APY29_RS15250 NONE
APY29_RS15255 NONE
APY29_RS15260 3405088 .. 3405103 +  -3.2  -3.48924   CTCATCGTTTCACGC              CAAGCC TGTC GGCTTC               TTATCTCAGCGCTAG  49 103
APY29_RS15285 3412160 .. 3412185 +  -8.9  -3.14132   TCGTCGGCAGTTGCA         CACCGCGG-GGC GGC GTCGCCGCGGAG         TTGATCGAACAAGGC  58 183
APY29_RS15295 3414921 .. 3414947 +  -9.4  -3.74747   CGCCGTCAAGGATGT         GCGAAGCCTTGC GCT GCAACGCTTCAC         TTTCCTACCCGTTGC  68 504
APY29_RS15305 3416384 .. 3416430 +  -7.8  -3.02144   CCTGCGCCAACGCAT CGTCGGCAGCCAGTTGGGTGCG CTG CGCATCCAGCAGGGTGAGGAAG TCTTCCGAGCCCTCG  53 401
APY29_RS15340 3425164 .. 3425202 +  -9.5  -2.58767   CGGCGTAGTGCCGGA  TCGACTGCGCC-GGCGGT GGTT GCCGTCTGGCGCAGGCCA   TAAGTTCATCGTTGC  56 33
APY29_RS15400 NONE
APY29_RS15405 3440398 .. 3440412 +  -4.9  -3.14211   GCCGGCACCGGTGCG               CCGCG ACTGA TGCGG               TTGATCGACAGCCAT  48 16
APY29_RS15410 3441476 .. 3441518 +  -2.6  -3.63515   CGCGGGCACGCCGAA GTAGCGCTGCGGGTTC TTGGGGAAATT GAATTCGCTGCGCAGC TTCTTGCGGATGAGC  51 327
APY29_RS15420 3442651 .. 3442666 +    -6  -4.07568   ACAGGATGACGTCGC              CGCGGC CCCG GCCGCC               TTTTCGAACCACCCC  65 116
APY29_RS15425 3443258 .. 3443273 + -11.8  -5.10461   GCCACGCAACAAAAA              GGCCCG GCGA CGGGCC               TTTTTGTTGCGTGGC 100 111
APY29_RS15435 3444459 .. 3444475 +    -5  -3.17075   TAAGCTGCGCATCTC              TGCGCC TGCCT GGCGCC              TTCACTTCGGCCAGA  48 245
APY29_RS15440 3445873 .. 3445896 + -14.6   -4.4261   GCCGATCAAATAGAA          GGCCGGCATG TGCG CATGTCGGCC           TTTTCGTCTTACGCA 100 279
APY29_RS15460 3451519 .. 3451533 +  -4.3  -3.55622   CTATTCCCACCCAAA               TGAGA GTTCA TCTCA               TTTGACCAGCTTGAG  53 166
APY29_RS15465 3452369 .. 3452400 + -14.4  -3.83026   CGTCGAAAAGTAACG      CGCCGCGCATGCAAG ACC CGTGCG-GCGCGGCG      TTTCGTCTGAAAAAC  89 28
APY29_RS15480 3455597 .. 3455622 + -21.9  -4.77036   GCGTTGAAACCAAGA         CGCCGCCCGGA GCGA TCCGGGCGGCG          TTTTTGATGGTCGCG 100 48
APY29_RS15500 3457826 .. 3457866 + -15.5   -2.8547   GCGGCTTGAGCCGGC GCATCG-CTGCGCAGCGG TCTCAT CCGCTGTGCAGTCGTTGC  TCTCATCTGGCAAGT  79 32
APY29_RS15515 3462493 .. 3462510 +  -3.3  -3.70043   GCGCCCTCCCGATTG             TGGGCAT TTTG GTGCCCC              TCTTTATGTCTTGAA  54 78
APY29_RS15520 3464934 .. 3464964 +  -7.4  -3.14344   CGCGCAGCTTGCACA       ATTCGCCCCCTGAG TCG CCCAGGTGGCGGAA       TTGGTAGACGCACTA  56 151
APY29_RS15525 3465060 .. 3465075 +  -8.2  -5.37593   GGTAGATCGTAAAAA              CCTCGC TTCG GCGGGG               TTTTTTCGTTTAGGC 100 49
APY29_RS15550 3470984 .. 3471001 +  -9.1  -3.36273   TCGGCGCTCTTCGAG             CCCGTAC CCCG GTGCGGG              TTCCTCTTCACGCAG  63 41
        parC NONE
APY29_RS15560 3475019 .. 3475056 +  -6.2  -3.42503   GTCAGCCAGTCGACT   GGGCAGCGTCGTTG CCGGCTCAAC CGGCGACGTGGCCC    TTATCGATCTTCCAG  55 282
APY29_RS15570 3478379 .. 3478399 +  -4.5  -3.09516   TCCTCCACCAAGCAT            GGCGCCCGG CAC CTCGGCGAC            TTCCATGATCAAGCA  47 326
APY29_RS15580 3480827 .. 3480842 +  -3.9  -3.76393   GCAAGGCAAATCGGA              CGCTG ACTGCA CGGCG               TTTCGCTTGCAATGT  56 251
APY29_RS15585 3482153 .. 3482169 + -12.3  -2.71712   CGATGCACGCCGGCC              GCTGCAG TGA CTGCAGC              CTTTACGAAGCCAGC  66 75
APY29_RS15620 3491503 .. 3491520 +  -2.7  -3.10344   GTAGTTATCAGGACA             CGATC ACTGCCAC GATCG              TCTATTGAGTCCGCG  41 0
APY29_RS15625 3492289 .. 3492303 +    -7  -3.14132   ACGTACTTTGTTGGC               CGCGCC GAC GGCGCC               TTGATGCGGCGCGAC  53 7
APY29_RS15630 NONE
APY29_RS15635 NONE
APY29_RS15640 NONE
APY29_RS15645 3496932 .. 3496954 +  -4.1  -4.28375   TGCATCACGCTGACT          CG-CCGGC TATAATCC GCCGGTCG           TTTTGCGTCTCTTGC  66 142
        rpsB 3498084 .. 3498106 +  -6.8  -2.82516   ACTGCATACATCTAC           GGGGGCGGCG GCA TGCCGCACCG           TCTCCTACTGGCGGA  49 116
         tsf 3499062 .. 3499079 + -14.1     -6.13   CCCGCTCGAACGAAA             GCCGCGG CATG CCGCGGC              TTTTTTTTTGCCTGT 100 46
APY29_RS15660 3500932 .. 3500942 +  -2.4  -3.59262   GCGTTTGCCGATCCC                 CCAC CCC GAGG                 TTTCCCCATGTCCGA  49 113
APY29_RS15665 3501718 .. 3501736 +  -6.7   -3.2056   TCGGGAATCGTTAAG            CGCAGTGC TGAC GC-CTGCG             TTGATGCCTGTCCGT  53 71
APY29_RS15670 NONE
        uppS NONE
APY29_RS15680 NONE
APY29_RS15685 3505235 .. 3505248 +  -2.3  -3.79668   CCACGCACGCGAGTT               GCACC CATG GGTGA                TTTCATCGGTTCGGT  52 46
        rseP NONE
        bamA 3509053 .. 3509084 +   -26  -3.90922   GATTGGCACGCGAAA      CAATGGCGGCCCGG ACGC CCGGGCCGCCATTG       TTGTTTGAACACCCT 100 41
        lpxD NONE
        fabZ 3510896 .. 3510909 +  -2.3  -2.74144   GATGTGCGCCGGCGC               CAGGT AATC ACCCG                CTTTCGGAGTAAGAC  39 19
APY29_RS15715 NONE
APY29_RS15720 NONE
APY29_RS15725 3514001 .. 3514019 +  -2.4  -2.78813   TTCGCCCCCGCCCCC            GC-CGGT ACCCTG ACCGCGC             ATTATTCCGGTCCCG  39 260
APY29_RS15730 NONE
APY29_RS15735 3518734 .. 3518748 +  -3.5  -3.34013   CCTGCGCAGCTATGG               TGCCT ACGAA GGGCA               TTGATTCGCACGATG  46 7
APY29_RS15740 3519591 .. 3519605 +  -4.2  -3.07816   CAAGACGCTCGCAGC               TGCAGG TCA CATGCA               TTGAATCGCTCGGCA  45 51
APY29_RS15745 3520198 .. 3520234 +  -6.6  -4.59773   CCCATCATGAAGCAC   CGC-AGGCATTCGCGGTG GGA CACCG-GAATGCCCCGCA   TTTTTAGCAGTGGCA  78 119
APY29_RS15755 3521621 .. 3521645 +  -7.7  -4.13654   AGTGGGCAAATCCTG          TCGTCGCGCCT GGC AGGCGAGCCGG          TTTCTCGTTTAGAGA  72 215
APY29_RS15760 3523090 .. 3523108 +   -16  -4.36262   AGTTACCCAAGAAAA             TCCCCGGC AAT GCCGGGGA             TTTTCATCTCGGTCT 100 40
APY29_RS15775 3526399 .. 3526432 + -15.4  -4.65895   ATACAGTGGCGCCAT     C-ACGTGCCGCGTCC CGCAA GGACGCGGCATGTCG     TTTTTACGTGCAGCA 100 74
APY29_RS15785 NONE
APY29_RS15790 3530275 .. 3530300 +  -3.9  -3.90744   GGTGGCCGTAACCGT         GCGGATCGGGCA AGC TCCCCGCTC-GC         TTGTTTCCGGAGCCG  58 257
APY29_RS15795 3532540 .. 3532592 +  -3.8  -3.36327   CAGCCGCCAGCCAGT GCGCATGCTGGTCGGCCAGCGTGAGC GCA GCCC-CGC-GACCGGCATGCCAGCGC TTGTCGCTGGCGTCG  49 309
APY29_RS15810 3535549 .. 3535568 +  -6.3  -3.28924   CGAGGCCGCTTAGAA            CCGGCAG ACCTCG CAGCCGG             TTGTGCGGCACGGTC  55 28
APY29_RS15815 3536589 .. 3536602 +  -3.8  -2.50994   GCCTGACGGAGCACG               GCCA TGATCC TGGC                GTTCCTGCGCTTCGA  41 35
APY29_RS15820 3540231 .. 3540247 +  -5.7  -2.85351   GGACAGAGCACGGCA              TGCGCTG CTC CCGCGCG              TCTGCTGTGGCGCGC  48 68
APY29_RS15825 3540900 .. 3540917 + -10.5  -5.90231   GGATTCGTAAGAGCG             GGCGTCC TTCG GGGCGCC              TTTTTTTATGTTTGT 100 56
APY29_RS15830 3543500 .. 3543516 +  -3.5  -3.86897   CGCTCGTACCCTCAT              CCGCCCC TGC GGGGCAC              TTTCTCCCCCATGAA  56 326
APY29_RS15835 3544177 .. 3544188 +  -3.6  -2.53876   AACAACGCTGGTATC                GCGG CAAT CTGC                 TGCATTGAGATGACC  39 6
APY29_RS15840 3544619 .. 3544660 +  -9.3  -2.92642   TCGAGTTGCATCCAA CCGCCTGAGCGCGGCGCTCG GCG CGA-TGCCGCGTCCAGCCGA TGTCTGCGTGGTCAT  58 18
APY29_RS15845 NONE
APY29_RS15850 NONE
APY29_RS15855 NONE
APY29_RS15860 3548067 .. 3548080 +  -5.9  -2.60075   GACGCGGGCAATGTG               TGCGC AGCT GCGCG                ATTCGTTCGCGACGC  46 120
APY29_RS15865 NONE
APY29_RS15870 NONE
APY29_RS15875 NONE
APY29_RS15880 NONE
APY29_RS15885 NONE
APY29_RS15890 NONE
APY29_RS15895 3555359 .. 3555389 +    -6  -3.39327   CGCACGCAGGATCTT       GGTCTTGTCGCTGG CCG CCAGCGCCAGCAGC       TTGTCGATCTCGCCC  55 357
APY29_RS15910 3559162 .. 3559185 +  -4.6  -2.71791   TATCGAAATCCCAGG          C-GCATTCCAG TTC CTGAAATGCCG          GTTTGCCAAGAAGCT  44 109
APY29_RS15950 3566342 .. 3566359 +  -8.4   -3.6849   TGGCATCCTGCGCAT             CGCACG CACGCA CGTGCG              TTGTTGGCATTGGGT  69 214
APY29_RS15960 3568577 .. 3568591 +  -4.2  -3.60296   TGCATTCCCTTCGAT               CATCCA TCA TGGAGG               TTTCCAATGGAAATC  53 345
APY29_RS15965 3569195 .. 3569210 +    -6  -2.91383   CGTAGTAAAGTGCGC              GGCCCG CTCT CAGGCC               TGTCTGCATGAAACT  48 149
APY29_RS15970 3570638 .. 3570651 +  -3.8  -3.05384   GCGCGGTTGCTGCTC               GACG CCTAGC CGTC                TTGCCTGCAACGGCA  45 69
APY29_RS15975 3571031 .. 3571052 + -12.3  -4.56367   GAACTGTTGTACCAA           CGTGCCACC GTAA GGTGGCATG            TTTGTTTCTGGCGTC 100 87
APY29_RS15980 3572109 .. 3572147 +  -7.3  -3.09635   CACTGCGTTGCCCGC   TTGCGATAGCGGCGCCG TATGC CGGGATCGCGGTCGCAA   TTGCATCGTGGAGAT  54 141
APY29_RS15990 3573220 .. 3573232 +  -9.1  -3.70109   ATGTTGTCTCCTCGT                CGGCA CCG TGCCG                TTGTTCGATCGTGTG  71 374
APY29_RS16005 NONE
APY29_RS16010 NONE
APY29_RS16015 3576912 .. 3576946 +  -6.3  -5.63517   TTTAAAATGTTGCAG     CGCGACGTGATCGGA CAGGA TCTGCAAACGTCGCG     TTTTTTGTTTCCCAC 100 73
APY29_RS16020 3578176 .. 3578196 + -12.6  -2.87564   CCTCAGCCAGGCAAG            GCGCCGAT CAGAA ATCGGCGC            TGTATCGCAGGCTCA  70 80
APY29_RS16030 3582433 .. 3582446 +  -9.5  -3.11634   TCATCATGTCGGGGG               CGCGC AATA GCGCG                TTGCCTAATCTAACG  61 104
APY29_RS16035 3582851 .. 3582869 +   -16  -5.30616   GCGAGTTCGGAAAAA             GCCGCTGG TTT CCAGCGGC             TTTTTCTTTGCCTGC 100 58
APY29_RS16045 3583405 .. 3583427 + -17.7  -2.68823   TCGCAGCACCCGCAA           CGCGCCGGC CATGT GCCGGCGCG           CTTGTCTCGGCCGAC  86 56
APY29_RS16050 NONE
APY29_RS16055 NONE
APY29_RS16060 3586496 .. 3586518 +  -4.7  -2.59191   TCGCGTGCTGCGCGA           GCGCACCGC CGTAC GCGGTTCCC           ATTCTCAGGATCTGC  43 167
APY29_RS16065 NONE
APY29_RS16070 3587804 .. 3587825 +  -8.7  -3.28924   CGGCGCCACAGGCGC           TGCCGTGAA GCGT TTCGCGGCG            TTGTACCGCACCCTG  60 18
APY29_RS16075 NONE
APY29_RS16080 NONE
APY29_RS16085 3592538 .. 3592571 + -17.4  -3.14132   GATGGCACTGCCGGT     GCGTTAGCCGGCGC CGCGAA GCGCCGGCCGACGC      TTCGTCCAAGAACGG  89 19
APY29_RS16140 3603570 .. 3603584 +  -5.6  -3.78775   GAGCTCCGGGCTCGA               CGCAGG GCG CCTGCA               TTTGCTGCTCGCCCG  60 201
APY29_RS16190 3615162 .. 3615184 + -17.8  -4.66163   AAGTCTGATTTGCAA           GAAGGCTGCC GTT GGCAGCCTTC           TTTTTGCGTCAGGGT 100 63
APY29_RS16225 NONE
APY29_RS16230 3627018 .. 3627049 + -14.5  -2.72463   TTCTAGGCGTCGCTT      GATCGGCTGCACA TGCTGC TGCGCAGCCGATC       TGATTGCACCTGCAT  75 35
APY29_RS16235 NONE
APY29_RS16240 3631345 .. 3631373 +  -3.8  -3.15544   GCGCCACATAGGCGA       TGCGCTGGGACGA CAGT TCATCCCA-CGCC        TTCCTGAGCATGACC  45 405
APY29_RS16255 NONE
APY29_RS16260 NONE
APY29_RS16265 3638595 .. 3638627 +  -6.4  -3.38046   GGTGCTGTTGGTGTT     GTGGCT-GCAGCTGAC TAC GT-AGCTGCTATCCAC     TATTTGCAGTGACAA  55 4
        mutS 3652467 .. 3652479 +  -6.9  -4.67982   GGGGATCGATTTGAT                CCTGC TTT GCGGG                TTTTGTTCGCTCAGG  81 128
APY29_RS16305 3653304 .. 3653315 +  -5.8  -3.37344   GTTGCGTGCATCCGT                TGCG GGAA CGCA                 TTGATTGCCTGCAAC  52 76
        katG 3655994 .. 3656041 + -22.1  -3.10344   ATGCAGGTGCGTGTG CCTGGTAACGCAAACGCCCCG AATCAC CGGGGCGTTTGCGTTTGCGGG TCTATTGCATGACAG 100 69
APY29_RS16330 3660205 .. 3660220 + -11.8  -2.88544   CCACAAACGCAAACA              GCCGCC CGAA GGCGGC               TGTCTGGCAATGGCG  67 244
APY29_RS16375 3667767 .. 3667786 +  -2.8  -2.66964   CGCACGGCGTCCCAG            GGCTG-GCA CCG TGCTCAGCA            TCCTGTCGTGGATCG  39 217
APY29_RS16380 3668394 .. 3668442 +  -4.3  -2.62983   AGCTCGGCAACGCAG TCCGCGTCGGCGGCCAGCACCAG ACA CTGGTCATAGCCCTTGCCGAGGA TGATCTGGGGATGCG  42 472
APY29_RS16390 3671146 .. 3671174 +  -9.5  -3.85817   CAAGGCGCGTACCGG        AGGCGTATCGCAT TGC AGGCGATGCGCCG        TTTCTAAAGGCAGAT  74 196
APY29_RS16395 3673473 .. 3673494 +  -5.7  -3.54919   CGAAGCCATAGACCT           GGCTCAAGC CCAG GCCGGAGCC            TTTGCCGACATCCTT  54 524
APY29_RS16410 NONE
APY29_RS16415 NONE
APY29_RS16420 NONE
APY29_RS16425 3680732 .. 3680747 +  -5.4  -3.59109   TGCACGCCGTGCAGC              CCATCT GCGG AGGTGG               TTATGTCATATATCG  55 374
APY29_RS16430 NONE
APY29_RS16435 3682213 .. 3682226 +  -2.3  -2.72344   AGGTGTTGGCACCTA               CGCGA ATGG TCGGG                TCGTTGACCGTGCAC  38 503
APY29_RS16445 3686369 .. 3686380 +  -7.2  -4.11216   GCGAGAAATTCTTGC                CGCG TGGC CGCG                 TTTTCGGCGTAGCCG  67 241
APY29_RS16480 3692429 .. 3692469 +  -3.2  -4.07568   GCGACCAGCGCGAGG TCGTGCATCGCAGGA-C-GC GAT GCAGTTCCTGCGGGGCGAGG TTTTCCGGAAGCGCC  59 214
APY29_RS16500 3700244 .. 3700280 + -17.4  -2.83403   TGGCGCACTCACAAA   CG-ACAACGGCGCAGGG AGAC CCCTGCTCCGTTGTCCG    CTTTCATAACGCGCG  87 469
APY29_RS16540 NONE
APY29_RS16545 3711047 .. 3711058 +  -5.8  -3.48395   GCCGGCGTTCAAGCG                GGCA GGCG TGCC                 TTCTATGGCCCGCCT  55 80
APY29_RS16550 3712403 .. 3712417 +  -2.1  -3.53012   ACCAGAATATGAGGG               GCGTT TGAAT AATGC               TTTGCGCAGGGGGAA  47 513
APY29_RS16560 NONE
APY29_RS16565 3713403 .. 3713424 +  -2.2  -2.87344   ACGCGGTAGCGCCCG           TCGCAG-CG CAGTA CGACCGCGA           TGTATCGGCCACGTC  40 32
APY29_RS16570 NONE
APY29_RS16575 3717512 .. 3717531 +  -2.8  -3.17361   TCGAAGTCGCCTCCA            TCCGGACGA TGT TCG-CCAGA            ATTTTCCTCGCTATG  44 288
APY29_RS16585 3720064 .. 3720101 +  -3.4  -3.85698   ATGCCAGCCATGCTG  CTCTGGGGTGTCGGGGTG CTTG CACCCTGAC-CGC-AGTG   TTTCTCCGCAGGAGA  56 352
APY29_RS16595 NONE
APY29_RS16600 NONE
APY29_RS16605 NONE
APY29_RS16610 NONE
APY29_RS16615 NONE
APY29_RS16620 3725188 .. 3725211 +    -3  -3.21099   CTGCTTACCTTTCCA          CGGCAACGCTG TCC CTGC-TCGCCG          TTGCTGCTCCCACCG  44 50
APY29_RS16625 NONE
APY29_RS16630 3726926 .. 3726944 +    -3  -3.53224   CGCCGCCCGCCAGCG             CAAAGCTG TAT CAGCACTG             TTTGCAGAGCACATC  49 209
APY29_RS16635 3727872 .. 3727883 +  -5.8  -3.15544   TATCAAGGTGAACTG                CTGC GGCT GCAG                 TTGCTACCGCTAAGC  49 344
APY29_RS16650 NONE
APY29_RS16655 3731466 .. 3731482 +  -4.5  -4.01853   GATTGGTACTGGTAC              TAGTTTT GGT AAAGCTA              TTTGTGCTGGTCTTG  61 411
APY29_RS16700 3741166 .. 3741181 + -11.8    -5.252   GGTAATACAGAAAAA              CCCGGC CTTG GCCGGG               TTTTTTGTGCGCCTG 100 77
APY29_RS16720 NONE
APY29_RS16725 3746828 .. 3746853 + -21.9  -4.08887   AAACGCGAAAGATCG         GCGGCGGCTCC GTGT GGAGCCGCCGC          TTTCATTTCAATGCT 100 72
APY29_RS16735 3748174 .. 3748196 +  -4.6  -2.82015   CTGAGTCCTGCCGTC           GCGGCGCCCC TCG GGCGGGCCGG           TATACTCGCTGTCCG  44 37
        tesB 3749288 .. 3749306 + -11.7  -3.06696   TGTTTCATCTTGAAC             TGGCGCC TCAAC GGCGCCA             TCTGTTCCGGACCCA  68 175
APY29_RS16745 NONE
APY29_RS16750 3750067 .. 3750082 +  -3.2  -3.03771   AGACCCCGGAGTCAT              GACGTG AAGG CAAGTC               TGTTCACCAGTCTGC  43 24
APY29_RS16755 3750615 .. 3750633 +  -7.3  -3.69395   CCCGCCAGGCGGAAG             GGCGCGG TCGAT CGGCGCC             TTGTTACGTACTGCA  65 85
APY29_RS16765 NONE
APY29_RS16770 3753855 .. 3753870 +  -6.8  -3.28712   GATCGTCAACGCCGC              GGCGGCG ACG CGC-GCC              TTCTCACGCGCAGCA  54 321
APY29_RS16780 NONE
APY29_RS16785 NONE
APY29_RS16790 NONE
APY29_RS16795 NONE
APY29_RS16800 3756932 .. 3756964 +  -3.9  -3.74747   GGCCGGCACCGTCAC      GCATGCGCGGCGGCA AAC TCCTGCTGCGCGAGA      TTTGCTGGAAATTCG  56 145
APY29_RS16805 3758274 .. 3758299 +  -6.1  -3.54424   CATGAAGGCAAGCCT         GCGCA-GCGAGG GAA TCTCGCCTTCGC         TTTCGCGGCGTGCCA  56 410
APY29_RS16835 3762637 .. 3762665 +    -3  -3.05596   ACGCATGTAATAATC       CGACGCAGATCCG ATTT CGGGTCGACG-CG        TTACCTCACGGAGTC  43 31
APY29_RS16840 NONE
APY29_RS16845 NONE
        minD NONE
APY29_RS16855 3765142 .. 3765171 + -17.9  -3.05384   GACAAGTAGCGCCAA       CAACGGCACCGCG TTCG CACGGTGCCGTTG        TTGCATGCGACCCGA  90 32
APY29_RS16860 3765960 .. 3765975 +  -3.2  -2.52464   TGCCAGCCTAGGTGT              TCGCAC AAGC GTCCGA               TCAGTTCCAGCCCGA  39 291
APY29_RS16875 3769843 .. 3769855 +  -3.3  -3.55444   AACGGCCGAGCAACA                CCGGT CCG ACCGC                TTTCCGACATCCGGG  51 58
APY29_RS16880 NONE
APY29_RS16885 NONE
APY29_RS16890 3774717 .. 3774743 + -11.5  -3.53444   CCGCTCGCATGATCA         GCGCCAGCACC TGGGC GGCGCTGGTGC         TTTCGCCGGCGATGC  72 275
        gcvP 3779659 .. 3779680 +   -13   -5.4505   CGACGGTTAACGAAA           CCCAGCCG GTAACA CGGCTGGG            TTTTTTGTTGCGCCG 100 53
APY29_RS16910 NONE
APY29_RS16915 3782360 .. 3782372 +  -3.3  -3.07816   ATCTGCTGTAAACGG                CGCAA TGG TCGCG                TTCGCTGCCTCGCGA  43 30
APY29_RS16920 3784757 .. 3784784 + -22.8  -2.52464   GCAACCCGGTTTTCG        CCGCTACCGCGC GTTT GCGCGGTAGCGG         TGGGTTACGCCCCCC 100 113
APY29_RS16925 NONE
APY29_RS16930 NONE
APY29_RS16935 3787137 .. 3787149 +  -4.8  -3.03309   TTCCTTGGTAAGGAC                CGAC CGAGC GTCG                TGATTATTGTTGCCC  47 108
APY29_RS16950 3792365 .. 3792376 +  -7.2  -3.76224   CTTGCTTGAATTGCC                GCGC GAAG GCGC                 TTTGATCGCTGAAGC  64 197
APY29_RS16970 3795823 .. 3795833 +    -4  -2.51642   TGGGGGGATTACCGG                 TTGA TCT TCAA                 ATTGATGCATGCTAT  41 66
APY29_RS16975 3797496 .. 3797508 + -10.5  -4.19953   GGCCGGGTTCTGCCA                CGGCG TGC CGCCG                TTTTCCCATTCGCTG  85 422
APY29_RS17010 3806949 .. 3806976 + -11.2  -3.09516   CCCAGGATGCGCCGC        TGGCGCATCTGC GGGC GCAGCAGCGCCA         TTGGATGCTGGCGCA  64 500
APY29_RS17035 3813116 .. 3813144 +  -5.1  -3.17723   TGGCCAAGTGAACAC        GCGCATGCTGGTC TGG GTTACGCATGCGC        TTGCATTGGCCATCC  48 30
APY29_RS17040 3813914 .. 3813930 +  -2.1   -5.5112   TTGGAGGTTGCAGCT              GCCTTGT CCT GCGCGGC              TTTTTTCTTGGTGGC  90 394
APY29_RS17065 NONE
APY29_RS17070 NONE
APY29_RS17075 3821032 .. 3821043 +  -5.8  -4.77759   TGCCACTGCCACCCA                GCTG CGCG CAGC                 TTTTTCCTGCCTTAT  80 206
APY29_RS17090 3825945 .. 3825979 +  -8.4   -3.1355   TCGCAACACCCCACA     TGGCCGCAACTGCGGC ACA GGCGCAGATGCACCCA     TTCGCTGTCGATGGC  56 364
APY29_RS17110 3830020 .. 3830039 +  -7.1  -3.46068   AGCGGCGAGTGAACC            GCC-CCGG CTTTC CCGGAGGC            TCTTTCCCTTGAGAG  57 146
APY29_RS17115 3831429 .. 3831444 +    -6  -2.79796   CACATCCTCAGGTGT              GGCGCG CCCA CGCGGC               TGTGCTACGGTCCGG  46 171
APY29_RS17120 3834013 .. 3834060 +  -8.5  -3.14132   CGCAAGCCGCATGGA TCG-C-GCGCCACCACTGCTGGCA GGC TGCCGGC-GTGCTCGCGCAGTCGA TTCCTGCACAACCCA  56 198
APY29_RS17130 3835153 .. 3835168 +  -4.6  -3.08679   AGTGTTCGGTGCCAC              CGGCGG CCTG CTGCTG               TCTTGAGTCGCACCG  47 4
APY29_RS17135 3837224 .. 3837264 +  -4.6  -3.15861   TCATGACCACCATGG CCAGGCTGCCATCGGTGTT GAGG AACGCCG-TGGTCGCCAGA  TTGCTACGGCTGCTG  47 274
APY29_RS17145 3838929 .. 3838952 + -12.4  -3.40403   CGCACCTTCACCCCA          GCCCCTCTCC CGCT GAAGAGGGGC           TTCTGGTCAGCGCGC  74 252
APY29_RS17160 3841448 .. 3841460 +  -3.4   -3.9281   GAAGTCTGCGCCTGT                GTAG GAGCG CTAC                TTCTTTCCACCTGAT  56 22
APY29_RS17170 3842262 .. 3842275 +  -2.3  -3.49777   GGATGTACTCCGGCT               GCTCG GTGC CAAGC                TTGTAATATATCCGG  48 333
APY29_RS17225 3857794 .. 3857852 + -23.9  -2.75992   ATTGATGGCGCTGCA GCTCGCCACGTATCGCGACGGACGGCG GCAAA CGCCCTCCGTCGACATGCATGGCGAGC TGCTGTTGCATCGCA 100 56
APY29_RS17230 3858441 .. 3858458 +  -9.8   -5.1356   TGCACCAAACAAAAA             GCCCGG AAACTA CCGGGC              TTTTTGTTGCTCCAC 100 243
APY29_RS17275 3870523 .. 3870541 +    -3  -3.07307   CTGCAGCCGATTACG             TGCTGCAG CAT CTGCCGGA             TTGAATACCCCTTTC  43 3
APY29_RS17280 3871237 .. 3871267 + -15.4  -5.42259   GACTCGATGATGAAA       CAGACAGGGAGCGC CTT GAGCGCCCTGTCTG       TTTTTTTGCCGCTAG 100 114
APY29_RS17320 3889680 .. 3889713 + -13.1   -3.6502   TTGCCAAAGTGTGCG     CGCCCCGTTCGGC AGGTGCAA GCCGACTGGGGCG      TTTCAATCAGCGCTC  79 520
APY29_RS17350 3896718 .. 3896737 +  -4.2  -4.14392   AACTCTCGCCATTGT            GCTCGATGC TCA GCA-CGTGC            TTTTCCGACTTCACA  61 448
APY29_RS17425 3908790 .. 3908823 +  -7.9  -3.70511   ATGTAGCACCGAGCG     GCGGCCGCGTCCGCC TGGC GGTGAGCGCAGGCGC      TTGTTGGCTGCTCTT  65 260
APY29_RS17445 NONE
APY29_RS17450 NONE
APY29_RS17455 NONE
APY29_RS17460 3917969 .. 3917989 +   -14  -5.03994   CCTGACTCGCAAAAA            CGCCGCTC GCAGA GAGCGGCG            TTTTTGTCTGTGCGC 100 58
APY29_RS17485 3921863 .. 3921887 +  -8.6  -3.27475   ACCAACGCCGCAAAT         CGCAGGGTCAT GCCA ATGGCCC-GCG          TCTTATGGTGGCCCC  60 63
         ffs 3922306 .. 3922316 +  -8.2  -3.28791   CAGGCAGCTCGTGCT                 GCGC CGC GCGC                 TTATGCAACGCCGGT  60 334
APY29_RS17525 3927756 .. 3927768 +  -7.7  -4.64676   GCCGGTAGCGCGATA                GTCCT GAT AGGAC                TTTTCTTCCACATAC  83 230
APY29_RS17540 3929545 .. 3929569 +  -3.6  -4.60797   AGCCACACCGGCGAA         CATC-GCACGT CACT ACATGCCGATG          TTTTCTGTGTACACC  69 182
        gloB 3932337 .. 3932353 +  -2.9  -3.06991   TGGAAAGACGAATTT              CGGGC ATGAGGC GCCTG              GTTTTGGCAGTGCTG  43 17
APY29_RS17565 3933866 .. 3933877 +  -5.8  -2.54325   CCGCAGATCATCAGC                GCGA CACC TCGC                 ATGTCTTTCAGAGCC  46 371
APY29_RS17620 3945486 .. 3945508 +   -12  -4.93877   CCTGGAAAAAGAAAA           GCACCTAGGC AGT GCCTAAGTGC           TTTTATTTGGTGGGC 100 420
APY29_RS17645 3946999 .. 3947012 +  -9.5  -4.87133   CCGAGCAAAACAAAA               GGCGC CTAG GCGCC                TTTTGTTTAAGCGAT 100 123
APY29_RS17665 3950773 .. 3950789 +  -2.1  -3.02144   GTCCACGCGCTGATC              GCTGACG CGT TGCCGGC              TCTTCACGGCAGTAG  41 28
        phoB NONE
        phoR 3953029 .. 3953043 +   -10  -2.95298   CAATCGGTGCCACTG               TCACGC TCG GCGTGA               TATGTAGTCAGTGCG  61 11
        ppk1 3955333 .. 3955346 +  -2.3  -3.40403   ACGGCGACCGGCCGT               CCGCT CCCC AGCGC                TTCTAATACCGAGCG  47 100
         ppx 3957010 .. 3957025 +    -4  -2.64735   GTCCGCCACGGGGCT              CTTAGA AGTT TCTGAG               TAGTGTCGATGGCGT  41 78
APY29_RS17690 NONE
APY29_RS17695 3958949 .. 3958963 +  -4.2  -3.42996   GCTTCGCCTGACCCT               TCTCCC AGC GGGACA               TTGTCCTCCGTCATG  51 134
        lpxH 3960516 .. 3960573 +    -6  -3.76952   GGGCTTCGAGCGCCT GCAGCGCGCGGGCTTGCGCGTCGCCGCC GGGG GGCGGCGCCG-GTGCGCTCACG-GCAGG TTTGGGTTGCGTGGC  62 473
APY29_RS17725 3964834 .. 3964859 + -16.1  -3.07816   CCATCCGCATGCCAA         CCAGGGCGGCC AATC GGCCACCCTGG          TTCGGTGACTCAGGC  84 429
APY29_RS17775 3976696 .. 3976714 +    -3  -4.37763   GAGTGGTGGGCGCGC             CCGCATGG CGG CTGTGCAG             TGTTTTTTTGACTGC  64 130
APY29_RS17785 3978158 .. 3978187 + -20.1  -4.62069   CTGACACTGCAGATG       TGCGAAAGGCGCC GCGA GGCGCCTTTCGCG        TTTTTAAGCTACGCG 100 45
         kbl NONE
APY29_RS17820 3985995 .. 3986023 +  -6.5  -4.16842   TCCCTGCCCTGCTCG        TCGCGCACGGTGG TGA CCACGCCGCGCGG        TTTGTTGAGCATCAG  70 496
APY29_RS17845 3989647 .. 3989689 +  -5.5  -3.01712   CATGGATGCGCGCGG CGCCTGCG-TATCG-GCGCAC GTC GTGCGGGCGGCAGCGAAGGCG TATTGCCGACCAGGC  49 74
APY29_RS17850 3991854 .. 3991878 + -11.4  -3.17571   GTAACGGATTTTCGA          GGACGGCGTC ACGAC GACGCCGTCG          TTGCGTTCGGGGCTT  67 37
APY29_RS17855 3992458 .. 3992468 +  -6.8  -3.54543   ACTGGCGCATCGAAT                 GCTC GAC GAGC                 TTTCGAAACATCGCT  59 49
APY29_RS17860 3993079 .. 3993092 +  -2.3  -3.34398   CGCATTTGGTGGGCG               CCTTC GGCA GATGG                TCTTTCGCCGAAGCA  45 305
APY29_RS17865 3993744 .. 3993760 +  -8.7  -3.14683   TCGAGATGCAGTGCC              GATGCGT CTG ACGCGTC              TTGATGCGCCCATCT  58 95
APY29_RS17870 3994749 .. 3994767 + -17.4   -4.2828   GCGCAATAACAAAAA             CGCCGGGC AAT GCCCGGCG             TTTTCATGACTGCCG 100 65
        typA NONE
APY29_RS17890 3998947 .. 3998984 +  -4.6  -3.28712   GTGCGACGCCGCCGT   CGCTGAGCCTGCCTGC CCGTTT GCGGGCACGCCCTCCG    TTGTCACCCCGACGC  50 20
APY29_RS17895 4000911 .. 4000921 +  -2.4  -4.20367   GCCGCACCCGCTTGG                 CGGC TAT GCAG                 TTGTTTCTTGGCCGC  59 242
APY29_RS17910 NONE
APY29_RS17915 4005994 .. 4006027 +   -11  -3.54129   CAGCACGGCTGGCCA     CGCTGCGTAC-CGCC TGCAT GGCGGGTGCGCATCG     TTTGGCGGACGTGTA  73 102
APY29_RS17920 NONE
APY29_RS18190 NONE
APY29_RS18195 NONE
APY29_RS18200 4052230 .. 4052250 +  -8.2  -3.08813   CTTGGCTCATTGGAT            GCTGCGAG CTGGC CTCGCTGC            TGTGTTGGCCTGAGA  57 55
        moaB 4053055 .. 4053077 +  -3.3   -2.7263   GCGACATTGCGTCCA           CGCTTAGGC GAATA GTCTGCGCG           CTTTCCACCGCTGCT  40 11
        ppk2 4054004 .. 4054024 +  -8.3  -3.14468   CAATTGCATGAAACC            GCGATGC AGCGGGC GCATCGC            TTCCATGTAGTCCAC  56 145
        wrbA NONE
APY29_RS18240 4058765 .. 4058805 + -16.2   -3.7941   GCGTCAGGTCCAGCC GCTGGTGGCCGGTGCCGGT GTTG ACCGCCACCA-CCACCAGC  TTGTTGTCCGGCGTG  91 409
APY29_RS18250 NONE
APY29_RS18255 4061330 .. 4061368 + -10.3  -3.57462   GAGTGAACGCGTAAA  CGCGATGCCGCGCGTATC GGCC GGTATGCGCGCTA-CGCG   TTTGGGACTCGACTC  70 35
APY29_RS18285 4069758 .. 4069815 + -14.1  -3.53811   CAGACACGCTGCAAG TCCGTCCTTGTAAGCTCCGTGGCGGCA TGGA TACCGCCATCGAGACTCCAGGGACGGA TTTACGGCGCGTCCC  81 206
APY29_RS18300 NONE
APY29_RS18305 NONE
APY29_RS18310 4073620 .. 4073661 +  -5.8  -3.86015   TGACGACGGCTCGCG ATGCGCTAGCGCGCTGTCC TTGTC GGATAGCGCGC-ACCGAAC TTTCTGCGACGCCTA  62 382
APY29_RS18325 4077341 .. 4077351 +  -8.2  -3.33492   GAATCGCTCAACGCA                 CCGC ACC GCGG                 TTGTGCAATGGGTCC  60 391
APY29_RS18340 NONE
APY29_RS18345 NONE
APY29_RS18350 NONE
APY29_RS18355 4085508 .. 4085536 +  -5.1  -4.19238   TCGCTTACGCAAACC        CGTCGGTGGCACG CAC CAAGGCATCGACG        TTTTCCGGTTCGAAC  65 251
        ahpC 4088362 .. 4088407 +   -11  -3.10409   CCGGTGCCGGGCTGC CCGCCAGCCGCCGCCAGCACG CACCC CGACCTCGCGCCGGCTG-CGG TTCACTCCCTTCCTC  66 86
APY29_RS18375 NONE
APY29_RS18380 4091197 .. 4091214 + -10.5  -5.56573   GAGGTTTGGAATTGG             GCGGCGC GCGA GCGTCGC              TTTTTGTTTGTTTGT 100 110
APY29_RS18385 NONE
APY29_RS18390 4092031 .. 4092057 + -22.4  -2.62184   GGGCGACTTCCGGCG         CGCAGCGCGCTA ACG TAGCGCGCTGCG         TCCTATCCCCGACCC 100 13
         tal 4093087 .. 4093125 + -13.3  -4.62872   AGCGAGCCTGTTCTG  CACATAACGCCTGCAGCT GTTC GGCTGCGGGCGTTGT-TG   TTTTTGGAGCTTGGT 100 47
APY29_RS18400 4093976 .. 4093986 +  -3.2  -3.73072   GCGCGGCATGTTTGC                 CGGA GAA TTCG                 TTTGATCCAACGATT  54 10
APY29_RS18415 NONE
APY29_RS18420 NONE
APY29_RS18425 NONE
APY29_RS18440 4102048 .. 4102094 +  -7.9  -3.28712   TGCTACCGAGATCGG GCGGCG-GGTG-CGCGGCTGCAG AGG CGGCATCTGCGTCATCACGCCCC TTCTCCGCCGCAGCG  58 80
APY29_RS18445 NONE
APY29_RS18450 4103406 .. 4103422 +  -4.3  -4.24204   GCCCACCTGCAAACA              CATGGCG CAG CGCGGTG              TTTTCGCTGTCGATC  63 127
APY29_RS18465 NONE
APY29_RS18470 4104922 .. 4104965 +  -3.1  -3.14132   TACTGATGTCGCGGG CGCAGCGGG-CGC-CCT-GCAG GTG CAGCGATGAGCGGCCTGCTGTG TTACTGCCGGCAGGG  44 35
APY29_RS18475 4106206 .. 4106236 +  -7.5  -4.72497   GCCGATTCCGAGCAC      CGGCCACGC--CCGC CTG GCGGCTGCGCGGTCG      TTTTGTTAGTCGCTC  86 239
APY29_RS18490 4108577 .. 4108587 +  -3.2  -3.44146   ACATTGAAACTGGCG                 TGTG CGT CGCA                 TTGGTTCTCAGGCCG  49 34
APY29_RS18495 NONE
APY29_RS18500 4109927 .. 4109941 +  -2.1  -3.10894   TGACCCGCGAACAGC              TC-GCC GGCT GGCTGA               TTCGCTGATCGTCGT  41 3
APY29_RS18505 NONE
APY29_RS18510 4111468 .. 4111486 +  -8.8  -4.36914   CGCGGTGTGCGTGCA             TCGCTGGC GCT GCCAGTGG             TTTTCTGCACCGAGG  79 68
APY29_RS18515 4113012 .. 4113054 +  -2.5  -3.02144   CGCCCATGCCTGCGT GCTGGCATGCACATCGCCAC CCGA GTG-CGCACTGCTTGCCTGC TGTTCGCCGGCGTAC  41 59
APY29_RS18520 4114702 .. 4114721 +   -15  -3.25823   GCCGCGCCAGAGCAA            CGGGCAGC CTGG GCTGCCCG             TTGCTCTGGCGCGGC  82 67
APY29_RS18540 NONE
APY29_RS18575 NONE
APY29_RS18580 4124699 .. 4124715 +  -2.1   -2.5742   GCCCGGGTCGGCGCA              GAGGCTA GAG TTGCCCC              ATGTTGGTCTTTACC  38 47
APY29_RS18585 NONE
APY29_RS18590 4126497 .. 4126523 +  -7.3  -2.87564   TGAGATAGACTCATA         CAACGCCTTGA AACCA TAGAGGCGTTG         TATGTACAGCAATGA  53 53
APY29_RS18595 4126820 .. 4126835 +  -3.9  -2.67129   CCCTATGCGGGGTAT              GCGGC AAGCTA GTCGC               CATTTTATTGGTTGA  41 115
APY29_RS18600 NONE
APY29_RS18605 NONE
        pdxA NONE
APY29_RS18615 4132567 .. 4132583 +  -2.1  -2.52543   CGCCGATTTCATCCG              GCTGGCC AAT GTCGAGC              TGGCTTGAGCGCCGT  37 1
APY29_RS18620 NONE
APY29_RS18625 4134076 .. 4134094 +    -8  -3.42056   CGCCTATCGGCCGGG             TGCGGCCG CAG CTGCCGCG             TTGTGCGTTGCACGT  60 117
        msuE 4146112 .. 4146125 +  -4.5  -3.07816   TGGCGCGCGCACCGA               TGCGT TGTT GCGCA                TTGCCTGACTGCACG  45 4
        ssuD NONE
APY29_RS18680 NONE
APY29_RS18685 NONE
APY29_RS18690 NONE
APY29_RS18695 4151495 .. 4151506 +  -2.2  -3.01712   TTCCGACTCGGACCT                C-GCG TCC CGCCG                TGTTGAACCGACGCC  41 64
APY29_RS18700 4152623 .. 4152644 +  -5.7  -2.70932   TGGTGGTGAACAAAC           GCCTGGGGT AGTC ACGCCTGGC            TGCTTGCGAGACCGC  46 15
APY29_RS18745 4159049 .. 4159089 +   -11  -3.06183   GCAACCGAGCCAATC CGGCGCGCCTGTCG-CCGG ATCG CCGGTCTGCAGGCGAGACG  TTGGCTGCCGCTCCA  66 44
APY29_RS18765 NONE
APY29_RS18770 4165737 .. 4165756 + -12.1  -3.91911   TAGAGTGGTATGTCC            GGCCGCC GGCCCA GGCGGCC             TTTCGTTGCCGTCGA  81 228
APY29_RS18775 4166683 .. 4166693 +  -2.4  -2.58544   CGCACCACCATCGAA                 GGCG ATG CACC                 GTTCTGAGCCTGCAC  38 8
APY29_RS18780 NONE
APY29_RS18785 NONE
APY29_RS18790 NONE
APY29_RS18795 4170175 .. 4170192 +  -6.9  -4.13767   TCGGCACGATCATCG             CCATGCC ATCC GGCTTGG              TTTTCAGATGCAGGC  67 262
APY29_RS18825 4176475 .. 4176508 +  -5.7  -2.88999   AAGCGCGGTCCCACA     GCGCGCCGGCGCGGG CCTG CCCGTGCCCGCCACC      TCTCGTCTGTGGGCC  48 245
APY29_RS18830 4177928 .. 4177958 +  -5.4  -2.85346   GGTGGTGCGGGTTCA      TCGGCGTGACGGT CTAATC ACTG-CACGCCGC       GTTTCATCCAGTCTT  46 41
APY29_RS18835 4179278 .. 4179289 +  -7.2  -3.96618   TGCTGATCGGCTGCA                CGCG CTAG CGCG                 TTATTTGCGCTTGCC  70 350
APY29_RS18840 4181843 .. 4181866 +  -6.6  -2.70932   AAGCGATACCACAGC          GGCGGTG-CCG GCC CGGCCGCCGCA          TGGTTGGCAGCACCA  49 39
APY29_RS18845 NONE
APY29_RS18850 4183828 .. 4183882 +  -7.7  -2.78384   TCGCCGGTCAGCACG GTGCTGCGGGGCTCGTGCCAGATGCG ATGC CACATCTGGCCC-AGCACCGCGCCGA TCTGATCGCGGGCCA  51 86
APY29_RS18860 4186353 .. 4186383 + -14.1  -4.09864   GAAACTGGCAAGAAG      TG-AGATGGGCCGC ACAT GCGGCCCATCTGCG       TTTTGGCGAATGCGT  90 62
APY29_RS18875 4192084 .. 4192094 +  -2.4  -3.73402   ACGAATCTCCAGAAT                 GGCC TGC GGCG                 TTTCCTGCACGCTGT  51 486
APY29_RS18910 4203030 .. 4203055 + -20.5  -2.70932   CTCGAAAGTGTCAAT         CAACGGGCGCC GCAA GGCGCCCGTTG          TGCTTCAAGGCCACG  91 65
APY29_RS18945 4209844 .. 4209877 + -21.8  -4.06687   GCACCACGATCAAGG     CCAGGCCCCGACGC GAACCG GCGTCGGGGCTTGG      TTGTTTCTACGGGCT 100 135
APY29_RS18955 4211900 .. 4211910 +  -8.2   -3.3334   GCCGCACGCTGCGCT                 CCGG GGG CCGG                 TTGTCACCTGGCATT  60 62
APY29_RS18960 4212211 .. 4212225 +  -3.5  -2.50016   GCCTGCGTCAGAAAA              CGGTCG AAGT CG-CCG               ATGTTCATGCTGCCC  39 130
APY29_RS18980 4217274 .. 4217292 +    -3  -3.70811   GATCCGCCGGAACCG             CCGCGATG ACG CATCTCAG             TTTCGAGTTCTATCC  54 60
        metF NONE
APY29_RS18990 4218931 .. 4218960 +  -7.7  -3.04461   ATCGCCGCGATGCCC       TGCGCGCCATGCG AGCG CGCCTGACGCACA        TCTTCGACCTGCATG  53 175
APY29_RS19010 4224808 .. 4224836 +  -8.7  -3.28791   TGGCGCCGCCAGCCA        GATACAGGTCGCC GAT GGCGTCCAGAATC        TTGTGCCGCACGAAT  58 381
APY29_RS19090 NONE
APY29_RS19095 4243647 .. 4243658 +  -2.2  -3.56643   GAGGCGCACGGCTCC                TTCG CCGA CGAG                 TTTCCACGCTGTGAC  49 11
APY29_RS19100 4244146 .. 4244158 +  -4.7  -4.37886   ATGTGGCATGCCCGG                AGCGG GAC CCGCG                TTTTGTACCGCCTGC  68 185
APY29_RS19115 NONE
APY29_RS19120 NONE
APY29_RS19125 NONE
APY29_RS19130 4249931 .. 4249950 +    -2  -2.67707   CGACCTATAGAAAAA            TCACACCC CTAT GGGTGGCA             ATATTATTGCTATCG  38 203
APY29_RS19135 4250862 .. 4250876 +   -10  -3.86897   AGAGCGCAAATGGCA               GGCTGT GGG ACAGCC               TTTGTCAGAAATAGG  76 445
APY29_RS19195 4265411 .. 4265423 +  -3.3  -3.61536   AATCTGGCCGATGTG                GGTTG CAG CCACC                TTTGCAAATTCCATT  49 396
APY29_RS19225 4270653 .. 4270682 +  -9.3  -3.36878   ATGGCAGGCGTGATG       CCGCCGAGCGCC ATATTCG GGCGCTCG-TGG       TTGTACGTCCATAGC  63 59
APY29_RS19260 4277972 .. 4277987 + -11.8  -5.37043   GTCGGAGTAGAAAAA              GGCGCC GAAA GGCGCC               TTTTTTATCTGCGAT 100 47
APY29_RS19265 4278537 .. 4278548 +  -5.8  -3.66178   CGTCCCTGCGCGGCG                TGGC CATC GCCA                 TTTCAGATTCACCGC  57 87
APY29_RS19280 4282236 .. 4282250 +  -3.4  -3.68351   GTCATGCAACTCCCA               GCTGCG CTG CGCGTC               TTTAGGTCATGCACG  54 522
APY29_RS19320 4288381 .. 4288426 +  -3.3  -2.60496   GCTACATGCTGCTGC CGAGCGTCTCGCGCCTGTG AGCAAACCGG CAC-GGCGCGGGCTG-TCG ATCTTTGCGCGGACC  39 6
APY29_RS19325 4290183 .. 4290195 +  -6.9  -3.56643   AGCTTGCGTTCGGCA                GCGGT GAC GCCGC                TTTCGGCGATCTCGG  59 297
APY29_RS19335 NONE
APY29_RS19340 4292666 .. 4292678 + -10.5  -2.64973   ACATGGCGACATCGC                GGCGG TTG CCGCC                TGCTCTGGAGTTGCT  59 101
APY29_RS19345 4294064 .. 4294074 +  -3.2  -4.21989   CTGTCGCCAAAGCGC                 GAGG TCA CTTC                 TTTCTTGACCTTCTG  63 413
APY29_RS19355 4295533 .. 4295563 + -17.7  -3.57144   GTCGCCACACCGCTT      C-ACGACGCCGGTC CCGC GACCGGCGTCGTCG       TTTACCGCTCGCCCC 100 54
APY29_RS19360 4296259 .. 4296308 +  -8.3  -4.36914   GCTGAACCGCATAAC CGCCAGCGACGGCCGCGCGTGGCA TCA TGCGCCCCGCGGCCGTC-CGGCCC TTTTCTCGCCCCACG  79 36
APY29_RS19365 NONE
APY29_RS19370 NONE
APY29_RS19375 4298151 .. 4298174 + -11.7   -4.8622   GACGCCCCCTCGACA          CCGCCTGTG CGATAA CGCAGGCGG           TTTTTCGTTGGGAGC 100 95
APY29_RS19380 4300225 .. 4300238 +  -2.3  -3.96327   CGTCGCTGCGGCGAC               CGTCC CACA GGAGG                TTTGTCATGCCACGT  54 46
APY29_RS19385 4301741 .. 4301760 +  -4.8  -2.52464   AGCCGACGCAGGCAG            GCGCGGCG GCAG CGACGCGA             TCGCTTCCCGCGCGC  43 49
        betA 4303495 .. 4303506 +  -3.6  -2.80077   ATTGCCGGCGATGCC                CCTG TGCG CGGG                 TGACTTTTCTCCGGG  40 11
APY29_RS19395 4304888 .. 4304916 +  -4.6  -4.42386   GGCAGCGCGAAACAC       TGGTGCATAGCGA CGTC TCGC-GTGTACCG        TTTTCTGCATGCAAC  71 16
APY29_RS19520 4340716 .. 4340742 +  -5.7   -3.1577   GAGGAACGACGCGGC         GCCTGCATCGC CTGCT GCGCTGTTGGC         TGTTGGCTGTTGGCT  49 87
APY29_RS19530 4343389 .. 4343403 +    -7  -3.65351   TGCGATTGGTGGTCA               GCGCGC CTT GCGCGA               TTTCGATGCCGATGC  61 416
APY29_RS19545 4345794 .. 4345811 +  -8.4  -3.08996   CGGCCGCGTTCAACC             GCGCTG CCAGAA CAGCGC              TATTGCGTGACGCTC  57 177
APY29_RS19575 4352316 .. 4352352 +  -2.7  -3.35679   GCGGCCTTCGCCAGA    ATCGGCCACGAACGGCG CGA TGCCGGCCATGGTCGGG    TTATGCGTCAACGCG  48 311
APY29_RS19620 4362000 .. 4362052 + -10.6  -3.53012   GGAGCACGCCAGCGC CGC-GTGCGGCACGATGGCCACGC CCACGCC GCGT-GCCAGCATGCGGCACAGCG TTTCGAGACCCGGCA  70 284
APY29_RS19630 4363773 .. 4363789 +    -5   -3.3692   ATGCAGCAACGGATC              CGGGCG CTTTT CGGCCG              CTTTTTCGCGTGCAG  51 233
APY29_RS19655 4369620 .. 4369637 + -12.7  -4.93877   CCGATTCCAAAAAAA             TGCCGGC TTTC GCCGGCA              TTTTCTTTACTCCGA 100 114
APY29_RS19665 4371425 .. 4371452 +  -5.5  -4.09685   GGCAATCCCCGCCGA        GGCCAGTTGCG ACAGTG CGCGATTGGCG         TTTTCGCGGCTGGCG  64 259
APY29_RS19710 4383305 .. 4383320 + -11.8  -5.46698   TGAGGCCACGAAGAA              CCGCGC GATC GCGCGG               TTTTTTCGTTTTGGC 100 95
APY29_RS19715 4385693 .. 4385706 +  -2.3  -3.31144   CGTCTTCGGCCACGG               CGGCA TAGG TGGCG                TTATGGCGGTCGAAG  44 257
APY29_RS19755 4396226 .. 4396251 +  -3.2  -3.99592   ATGCCGATGCGCTTG         GCGTTGCGTA CGAGCT TCCACAACGC          TTTGTCATCGTCGAT  58 259
APY29_RS19780 NONE
APY29_RS19785 4403851 .. 4403863 +  -6.9  -2.80113   CGTCGCAGCTCAACC                GTGGC ACA GCCGC                TATCATGCAGTGATG  49 116
APY29_RS19790 NONE
APY29_RS19795 4404972 .. 4404990 +   -16  -3.08679   TGCTGCAAACAAAAA             GACCCGCC ATT GGCGGGTC             TGTTCCATCCCACGC  84 169
APY29_RS19840 NONE
APY29_RS19860 4418907 .. 4418935 +  -8.8  -2.78547   CGCTGTCGGGCACAT       CGCGCGGC-GC-CG CAT CGAGCAGACGCGCG       TGGTTGATGCGGTCC  52 449
APY29_RS19875 4421065 .. 4421075 +  -2.4   -3.2963   GCTCGGCCAGCAGCT                 GCGC GGC GCCC                 TTGTCGAACAGTCCT  45 176
APY29_RS19905 4427171 .. 4427184 +  -2.3  -3.58162   GCCAGGAAGGCGGCT               GGTCG CACG TGGCC                TTCGTTTGCTGATGC  49 47
APY29_RS19910 4427773 .. 4427787 +  -9.2   -2.5507   CCCGGTTTCGTGCAA               CGGCGT TGT GCGCCG               GTCTTACTTGCGTGC  56 135
APY29_RS19930 4434469 .. 4434524 + -24.8  -3.09803   AATGCCTGCTTAGGA GCGCACCCGTGCGCGACGAAGCGTTA TCGG TAACGTCTTGTCGCGCCCGCGTGCGC TCTTGCATGGCATTG 100 96
APY29_RS19935 4437014 .. 4437048 +  -6.3  -3.14211   CAATCGCGGGCCGAA    CCCGCCATCGC-CAGC TTGC GCGAAGCGATGGCGCG     TTGCTGGAAAGCGAT  53 183
APY29_RS19945 4443596 .. 4443608 + -10.5  -2.91467   ATCCACGCCGCGTTG                CCGGC GCT GCCGG                TATCCTTGCGGCTTT  61 509
APY29_RS19950 4444628 .. 4444648 + -12.6  -2.71712   TACCCTCAGCCCAAC            CCCTCTCC CGCTA GGAGAGGG            CTTTGAAGCGAAGCG  68 73
APY29_RS19960 4444925 .. 4444943 + -12.4  -2.52464   CGTAAAGGCACCGCC             TGCACGCC ACT GGCGTGCG             TGCCTTGGAGCGCCC  63 73
APY29_RS19975 4446987 .. 4446997 +  -6.8  -3.16564   GCGCCTGCGCGGCGT                 CCCA CAG TGGG                 TTCATCACGTCCGCC  52 481
APY29_RS19985 4448446 .. 4448463 +    -4  -3.59979   CAGCTCGCTCGGTCC             CGCCCG CCACAC CGGTCG              TTTACCATGCCCCAC  53 243
        treA 4450265 .. 4450297 +  -4.8  -2.83403   CATCTTCGATGCGCA     GCATAGC-CGTTGCG GCAA CACGACGCGCTCTGC      ATTTGCTGGCAACAC  46 114
APY29_RS19995 4451329 .. 4451358 +  -9.3  -4.07568   GTCAACAATGCGCAT       C-GCCCGGTTGC ACGCCAC GCAGCCGGGCAG       TTTTCCGGCCAACCC  76 59
APY29_RS20005 4454018 .. 4454053 + -11.1  -3.14463   CACGTAGCACATCAG    CACGCCGCC-GGGCAT CTTGA ACGCCGAGGCGGCGTG    TTGCTCCGGGCGCTT  64 268
APY29_RS20020 4457159 .. 4457187 +  -3.7   -3.1352   ATGAAACAGCAGGTA        GCCGAAGGCGATG GCC CATAGCATCTGGC        TGTATTGGGTTGGCG  45 246
APY29_RS20030 4459175 .. 4459185 +  -2.4  -3.05384   ATACTGCCGCGCCCT                 CGAC ACG GACG                 TTAGATGCGCGCCCA  41 216
APY29_RS20035 4459780 .. 4459802 +  -2.7  -3.72893   GGGCCGATGCGAATC          CGGC-CTGAT TTTG GTCAGCGCTG           TTTGATCAGCAGATC  52 58
APY29_RS20060 NONE
APY29_RS20065 4464310 .. 4464326 +  -3.6  -2.83403   TCGGACGGTCGCGCC              GACCGC ATTGC GCGCTC              CTTTCATCCCGGAGA  42 139
APY29_RS20070 4466748 .. 4466792 + -11.5  -2.53382   CCGCGTCAAGCTGCC GGATCACACGTGTCATCCGG CCAGAC CCGGATGACACG-GTGGCAC TCACTTGGCCGTACT  62 98
APY29_RS20085 4468301 .. 4468312 +  -5.8  -3.57387   TTGTGGACACACCTT                GCAG GAGG CTGC                 TTTGAAGACTGTGTT  57 67
APY29_RS20090 4469411 .. 4469431 +  -5.3  -3.03124   GCATGCGAGCACAAC            CGATGCGCA GCG TGCACAACG            TCTTGCCAACTCCCA  47 154
APY29_RS20095 4470353 .. 4470366 +  -5.2  -3.29096   ATCGTTGCACCGTTG               CCCG GGCTGG CGGG                TTCGTCGTTGATCGG  51 379
APY29_RS20115 4474828 .. 4474845 +  -7.7  -3.91084   CGCCCGCGGTGACGG             TCACGGT GCGC GCCGTGA              TTTGGTTCCCGATAG  68 389
APY29_RS20130 4476836 .. 4476857 +  -2.9  -2.79679   CGTCGCAATCGTAGT           GGGCGTCAA CACG TTCACGCGC            TGTCATGCCAATGTT  40 27
APY29_RS20135 4477368 .. 4477397 +  -9.3  -3.36878   ATGGCAGGCGTGATG       CCGCCGAGCGCC ATATTCG GGCGCTCG-TGG       TTGTACGTCCATAGC  63 59
APY29_RS20145 NONE
APY29_RS20165 4483074 .. 4483086 +  -4.8  -3.97834   CTACCAGTTCACGTA                GAGG GTAAA CCTC                TTTCTGATCAACTTG  63 99
APY29_RS20205 NONE
APY29_RS20210 NONE
APY29_RS20215 4496260 .. 4496312 +  -7.4  -3.14564   CACTTCGCCGAAGCC TGAGCGCAGCTGTCCTACCGACGGC GCTC GCCGCCGGGCGGGC-GCTGCGGGCC TTCCTCCGGAGCTGA  56 23
APY29_RS20220 4497412 .. 4497447 +  -7.5  -3.04263   CCAGCGACTGCGCCA    TGCGCC-CGGGCGTCA ACAGC TGCCGGCCGCGGTGCA    TCTTGAGGATGCGGT  53 365
APY29_RS20270 4506613 .. 4506626 +  -8.1  -2.57132   CGCGCAGGTCGATTC               TGCCC CCGC GGGCA                CTTCTCCCGCAGAGA  53 88
APY29_RS20275 4508030 .. 4508066 +  -6.4  -3.53012   ACCAGCACCAGCAAC   CG-CGTGGAGGGCGGCG CCAG TGCCGCCACCGACGGCG    TTTGCCCGACCGCGG  56 472
APY29_RS20300 4512318 .. 4512341 + -12.4  -2.52464   GTGATCGTCGTTGCA          TCGGCGGCGT TGCC ACGACGCCGA           TGCCTTCAACCGCGC  65 207
APY29_RS20315 4515445 .. 4515463 +  -3.8  -3.84246   AAGCGGCGTACTCAC             CAGTGC ACTTACA GCGCTG             TTTCATCCTTGCCCA  58 119
APY29_RS20325 NONE
APY29_RS20330 4520129 .. 4520156 +   -17  -3.76224   GCCAGGCATAAAAAA        GCCCGCTTGCAG CGAA CTGCCAGCGGGC         TTTGCTCCCTCCCCC 100 275
APY29_RS20355 4532882 .. 4532899 + -14.1  -5.52384   ACGCGCATAAAAAAA             CCCCGCC GTTG GGCGGGG              TTTTTTTACTGCAAC 100 88
APY29_RS20375 4537218 .. 4537248 + -14.7  -3.01924   TGAACTGAGGACGAT      CAC-CGGCGCTCCG ATCG CGGCGCGCCGGGTG       TCTTGCGAGCCACTG  78 33
APY29_RS20390 4539427 .. 4539452 +  -3.1   -4.2828   GGACTGCCTCCACAC         GCACGGTGATG GCAC CGTCGCCGGCC          TTTTCATAGGTGAAG  63 218
APY29_RS20400 4540418 .. 4540435 +  -6.9  -3.36273   GGTCGCATTGACCAA             GGCGCGA AAAT TCGCCCC              TTCGTCTTCGAGGCG  56 223
APY29_RS20410 NONE
APY29_RS20415 4544524 .. 4544556 +  -6.8  -3.62597   CGATCGCCCTTCATC      TGACACGCCGGCCC TGTCC GGCCCGGCGCCTCG      TTGTTGGCGCCTGGA  59 405
        aroQ NONE
        accB NONE
APY29_RS20430 NONE
        accC 4547866 .. 4547881 + -11.8   -5.5074   GATGAAGCAGAAAAG              GCCCGG GAAA CCGGGC               TTTTTTGTTGCGTTA 100 60
APY29_RS20465 4552657 .. 4552671 +  -7.8  -2.52464   CCCGCAACCGGGTCA               CCGGTT GCC AGCCGG               TGCGTTGCAGCGCCG  49 125
APY29_RS20475 4553742 .. 4553756 +  -3.4  -4.07568   CGCCGGCTTGCGTTG               CTGTCG CGG CGGCCG               TTTTCGGAGACGGCA  58 157
APY29_RS20485 4555390 .. 4555408 +  -4.5  -3.15544   GACTCACTCCCCCTC             GCCGG CCACGCGTC CCGGC             TTCGTGACACTGGGA  47 90
APY29_RS20490 4555722 .. 4555732 +  -3.2  -3.29144   GGGAATCGGCAATCG                 TCAC GGC GTGG                 TTCTGCCAGACGTGG  46 44
APY29_RS20535 NONE
APY29_RS20540 NONE
APY29_RS20545 4568156 .. 4568182 +  -2.9  -3.01712   CCGAACAGAGCAACG        GCGCGCTGGTAG TCGC CGACAAG-GCGC         TGTTCAAGCGCGCAG  43 447
APY29_RS20550 NONE
        yccS 4570639 .. 4570649 +  -3.2  -3.53343   ACCAAGGCCTAGAGC                 GTGT GAT GCAC                 TTTGACAGGACGCTT  49 29
APY29_RS20565 NONE
APY29_RS20570 4575030 .. 4575072 +  -7.7  -3.59979   GCGGGTGCAGGCTTT GCGT-CCATGGCGCGCCG CGAGTAGC CTGTGCGCCATTGCACGC TTTGCCGTCGCAGCC  62 46
APY29_RS20575 4575434 .. 4575449 +  -3.2  -3.53012   TCGACCCCACTCACC              CATCAG TTCG CTGTTG               TTTACCACCCAAGGA  49 41
APY29_RS20580 NONE
APY29_RS20585 4576670 .. 4576680 +  -2.4  -3.53012   GGGCGGCAGCAACAC                 GGCC AGC GGGC                 TTTCCACCGCCAGGG  48 468
APY29_RS20605 4580408 .. 4580427 +  -3.4  -3.21099   CCGACGAGCTGCAGC            GGCGAAGC AAGC GATGCGCC             TTCCTCATCACAGCG  44 262
APY29_RS20625 4583257 .. 4583293 +  -4.3  -2.78216   GCCGATGAGGTTGCG   TCGCCGGCCGACACCG CTGTGC CGGTGAGCGC-GGCGA    TCATTCCTGCGCCTG  42 184
APY29_RS20630 NONE
APY29_RS20635 4587483 .. 4587498 +  -4.6  -2.82516   CCTGCATCCGTTAAC              GCGAGG CTCA CATCGC               TCTGATGCTCAACGC  44 85
APY29_RS20655 4589646 .. 4589672 +  -4.5  -2.52623   CCATAGCCACCAAGG        TATT-CACGCCC TCGC GGGCATGCAATA         ATCTTGTACCAACAC  41 29
APY29_RS20660 4589780 .. 4589799 +   -10   -5.7946   AGCCAAACACAAAAG            GTCCGATC GAAA GATCGGGC             TTTTTTTGTTGCCCG 100 36
APY29_RS20675 4591632 .. 4591648 +  -3.6  -2.90723   CTCCAAGCTGATGAA              GACGGT TGCCT ACCGCC              TCTAGTTGGGAATCG  42 4
APY29_RS20690 4594091 .. 4594142 +  -8.7  -3.74693   TTGTGCACTGGCTGC ATGCCGGGTTCGGCACCGATCG ATTCGATTG CGA-CGGTGCCGACATCGGCAG TTTCATGACCTCCGC  69 62
APY29_RS20745 4605370 .. 4605386 +  -7.9  -3.31792   GGCGGCGGGCTTCCG              GGTCGGC GTT GGCGACC              TTGTCCGGGTGGTAG  56 154
APY29_RS20755 4606807 .. 4606837 + -14.7  -3.32844   CAGACGCCGCTTTGA       CTCGGAGCGCCGA CATTC TCGGCGCCTCGAG       TTCTCGACTACCGAC  82 82
APY29_RS20760 4607684 .. 4607697 +  -2.3  -3.89822   CAGGCAGCCCATACA               TCGCC GAAT GACGA                TTTCTGCGATGGGTC  54 65
APY29_RS20765 NONE
APY29_RS20770 4609228 .. 4609245 +  -4.1  -5.28683   AAGTAATGGCTTGCG             CGGAC AAGGATGG GTCCG              TTTTTTCATGTTGCT  88 45
APY29_RS20775 4611059 .. 4611082 +   -16  -5.27938   CGATAGATCAAAGGA          CGCCGGCCAG GACA TTGGCCGGCG           TTTTTGTTTCCACAT 100 49
APY29_RS20780 4613092 .. 4613132 +  -2.5  -2.92936   GTCATGCCACCAAGG CGTG-GCGGGGGGC-ACAT CTGCC ATGGCGCCATCCGCGCGCG TATGCTTGGGTCATT  40 55
APY29_RS20785 4613684 .. 4613715 +  -8.6  -3.05384   ATGCGTTGGCCGCCA      G-CGGTGCGGCGCGG GTG CTGCGTGGCGCCGGC      TTGGCTGGCGCCAAG  57 66
APY29_RS20795 NONE
APY29_RS20800 NONE
APY29_RS20805 NONE
APY29_RS20810 NONE
APY29_RS20815 NONE
APY29_RS20820 4621050 .. 4621081 + -12.2  -2.57132   GCGACTCACCGATCA      TGCACAGCGCAACG CCAC CGTTGCGCAGAGCG       ATTCTGCGACCGCCC  65 207
APY29_RS20830 NONE
APY29_RS20835 4623061 .. 4623083 +  -3.2  -2.73124   CGCTCAATGCCTGCT           GCGTAGGGCG CAA CACCGCACGC           GTTTCGAACATGAAG  40 272
APY29_RS20855 4626981 .. 4627000 +   -15  -5.27335   CGATGCAAAACAAAA            CCCCCGCA GCAG TGCGGGGG             TTTTTGTTTGACGCG 100 356
APY29_RS20875 4634559 .. 4634580 + -14.4  -5.60993   CTCTACTGCGACAAA           GGGCGCGG CTCGGT CCGCGCCC            TTTTTTTGTGCAAGC 100 64
        pdhA NONE
APY29_RS20885 NONE
APY29_RS20890 NONE
APY29_RS20895 4638759 .. 4638796 + -13.3  -3.84185   CTAGGCGCGGCTCAC   GAACGACTGCGCTCACC GCCA GGTGGGCGCAGCCGGCC    TTGTATTTCCATCGC  83 37
APY29_RS20900 4640871 .. 4640881 +  -2.4  -3.40403   GATGCGGTCAACACT                 GCGC CAG GCAC                 TTCTCGTCCCGCAGC  47 406
APY29_RS20930 4648820 .. 4648832 +  -9.1  -3.18912   ACCGAGTGAATGACG                CGGCA CGC TGCCG                TTGATGGGTAACTGC  61 32
APY29_RS20945 NONE
APY29_RS20950 4652454 .. 4652471 +  -3.3  -3.35934   GTCGCGCACAGGCAC             GCCCCACG ACA CG-GCGGC             TTGTCACCTGTATCC  46 335
APY29_RS20995 4667917 .. 4667935 +  -8.8  -3.41302   CGAACCCCGGTGCGC             CCGCGC AATCGCC GCGCGG             TGTTTACCGTGTTGG  63 49
APY29_RS21005 4671054 .. 4671087 +  -7.3  -3.53012   GCACAACCACTATCA     CGCATG-GGCGCAATG CAT CTTGGCGCCACCTGCG     TTTCAGCAGCGCCGC  60 204
APY29_RS21015 4673743 .. 4673763 +  -4.5  -3.44051   TCGATAAACACCGAT            GGCGCCGGT TCG GCCAGCACC            TTCTCGTGCTCGGCA  51 354
APY29_RS21025 4677041 .. 4677055 +  -2.8  -3.72588   ACGAATCGGAATCGC               CTTGAA CCG TTCGGG               TTTCGATATCCCTTG  54 472
APY29_RS21030 4678560 .. 4678607 + -31.4  -2.95298   TCAGGCCAGCATCCT ACCGCCGCACACGCACTGCCGG ATTA CCGGCAGTGCGTGTGCGGCAGC TATGTGATGGCTCCA 100 81
APY29_RS21040 4680214 .. 4680248 + -17.9  -2.71204   CCCTACCGGCCACGG     CCTGCAGGTTGCCGC TTCAT GCGCCAGCCTGCAGG     TGCTCTCATTGCTGT  86 56
APY29_RS21090 NONE
APY29_RS21095 NONE
APY29_RS21100 4692305 .. 4692317 +  -7.7  -3.13403   CGACAGAAAGCCATT                TGGAG GAA CTCCA                TCTTGCTAACCGAGC  56 52
APY29_RS21105 NONE
APY29_RS21110 NONE
APY29_RS21115 NONE
APY29_RS21120 NONE
APY29_RS21125 NONE
APY29_RS21130 4696356 .. 4696368 +  -3.3  -2.89683   ACCAGGGCACGGACG                CCTAC ACC GGAGG                TGTGTCCGGTGGAAT  42 162
APY29_RS21135 4697509 .. 4697543 +  -9.2  -2.51547   AAGCGACTGCGCAAC     CGGTTCACAGAGTCAG CGC CTGCCTCCGTGCACTG     ATCTTCCTGTCACGC  56 430
APY29_RS21150 4702147 .. 4702199 + -13.4  -3.05596   TGAACGTGCCTCTAG GTGCCTGGAGGCACGTTCCGGC-GC CGCT GCAGCCGTAATGTGCCTGCGGGCGA TTAAGTGACGGGATG  75 194
APY29_RS21170 NONE
        bioB 4706348 .. 4706372 +  -6.9  -3.07994   GGCTGGGCGCCCTGA          GCCCGGCACGC TAC GCTAGCCGGCC          TTCCCTGCCGTTGAA  51 70
        bioF 4707694 .. 4707725 +  -2.1  -3.68619   CTGCGTGGCAGGCGA      CCACGGCGCGCTG ACCGTG CATTGCGCGATGG       TTTGCCTGCATTGGA  52 119
APY29_RS21190 NONE
        bioH NONE
APY29_RS21200 4709851 .. 4709883 +  -3.4  -3.05816   GCTATCCCGGCACGT     TCTA-GCGTGGCGTCG TCG CG-CACCACGCATCGA     TTCCCTCCGCCCTAG  43 21
        bioC 4710966 .. 4711015 + -13.8  -3.71649   TCAGCTTGTTCGATG GTGGCTACCGA-CA-CG-ACGCAGC AGT GCTGCGTGCGCTGCTTGGCAGCCAC TTTCACGTTTGCGGC  84 184
APY29_RS21210 4712282 .. 4712308 +    -8   -3.1994   GCCCACCAGCACATA        GGTCTGCCCGG TGGCCT CCG-GCAGGCC         TTCGTCGGTGGTGTG  54 345
APY29_RS21230 4715034 .. 4715063 + -22.3  -5.12971   TCGGCGCCTACAACA       CAGAAAGCCCCGG CATG CCGGGGCTTTCTG        TTTTTGTTCGATGTT 100 229
APY29_RS21235 4717385 .. 4717408 +   -11  -3.53012   CGACCGCGCCGGTCA          TCGCGACACG ATGG CGTGTCCCGA           TTTGCGAACACGCGG  71 104
APY29_RS21240 4718559 .. 4718592 +  -7.3  -3.53012   ATCGCCGGCAGCAGG     CGCTGG-CGTAGCGTC AGT GCCGCCAGGTCCAGCG     TTTCACCGGCGGCAC  58 360
APY29_RS21255 4721996 .. 4722031 +    -6    -3.524   AGGGTCACCCAGCTG    CGATCTTCGCTGCGCA GACG TGCGTAGAGATGGGCG     TTGTCTGCCTGGGTG  56 390
APY29_RS21305 NONE
APY29_RS21310 4732837 .. 4732861 + -13.5  -2.90723   GCGAGCTGCAGGCGC          CCCCGTCGGCC TCT GGCTGACGGCG          TGTCGTTGCGCATGG  74 280
APY29_RS21315 4733915 .. 4733926 +  -2.2  -4.23758   ATTGAGGCCCATGTT                CGTT TTTG AGCG                 TTTTACGTGTCAGCT  59 36
APY29_RS21320 4735648 .. 4735679 + -10.2  -3.03159   TGCTTGAACACACCG      CGTTGCCG-GCGA GGACGGG TCGCCCGGCAGCG      TATTCCGGCGCTTCA  62 34
APY29_RS21325 4736737 .. 4736757 +  -4.6  -3.62224   TGCACCGACCTTTCT           CGCCGTGCG CCAC CGC-CGGCA            TTGTTCGAGGAATCT  55 127
        glpK 4738297 .. 4738318 + -11.5  -3.76048   TGCCCCGATACGACA           GCGCCCACC GTGA GGTAGGCGC            TTATATTGATTGACC  76 47
APY29_RS21350 4743317 .. 4743333 +  -5.8  -3.25823   GATTGACGACCTCGT              CGGCCA CCGTC TGGTCG              TTGATATGCAGCAGG  51 511
APY29_RS21385 NONE
APY29_RS21390 NONE
APY29_RS21405 4755315 .. 4755348 +  -3.1  -3.40403   CGTTGTTGGACGGCT     GAGGCCAG-TGAGCGC GGC GTGGTGAGCTGGCTTC     TTGTGGTAAGCGCAA  49 24
APY29_RS21415 4756656 .. 4756679 + -14.6   -3.3482   TAACAATTCATTCAA          GCCGAACCCGC TTC GCGGG-TCGGC          TTAATTCAGGCGTTG  82 44
APY29_RS21425 4759802 .. 4759849 +  -8.3  -3.50853   TGCTGATAGTAGTTC GCTTCTGCTTCGGCCGGTGGG ATGTCG CCGATCGGGCCAAGCAGGCGC TTGTGGTTGAACCAG  62 357
APY29_RS21435 4761711 .. 4761740 +  -9.3  -3.36878   ATGGCAGGCGTGATG       CCGCCGAGCGCC ATATTCG GGCGCTCG-TGG       TTGTACGTCCATAGC  63 101
APY29_RS21445 4762941 .. 4762954 +  -2.3  -3.96892   TGGTCGAAGTCAAAA               TGCCG TGAT CGTCA                TTTGTCCTAACAATT  57 18
APY29_RS21450 4763712 .. 4763725 +  -3.7  -4.58395   GGCAGCTTGGGGTTA               CGAGC GCTA GCGCG                TTTTTCGGGGATCAG  72 437
APY29_RS21455 4764241 .. 4764283 +  -5.5  -3.09131   GGATCCAACGCCACT GCCGC-CTGCT-GTGCGCGAT CGA ATCGCTCGCGGGCGGCGCGGA TGTTGCCGTGGTTTT  49 247
APY29_RS21465 4765659 .. 4765708 + -10.7  -2.71364   AGCGCGCTGAGTCAC GGCCGGGACCATTGCGCTGCCGAG CCG TTCGGCA-CGCAGTGGTTCGCGCA TCGTTGAGCAGGTGC  63 31
APY29_RS21470 4766432 .. 4766455 +    -8  -3.75153   CCCTCTTGGCAGCAC          CGGATCGACG CAGC CGCCGACCCG           TTTCCCTTGCACGAG  65 345
APY29_RS21475 4767949 .. 4767986 + -16.3  -2.55668   TGAGCAGGGTCGGCA   GCGCCGGTCATCGCTGC TGCA GCGGTCATGACCGGTGC    ATTCGTGTGCGGCTG  80 38
        kdgT 4769123 .. 4769161 + -10.9  -2.62735   GCATGGCGCCGGAAC  GAGTCGGCGCCGGCG-AC GCCG GTGCGCAGCCGCCGACGC   TCATGTGGCCGATGT  62 102
APY29_RS21500 NONE
APY29_RS21505 NONE
APY29_RS21510 4775175 .. 4775187 +  -7.7  -3.34043   ATGTCGTTGCCGTGC                GCGAT GGC ATCGC                TTCTGCAATGCTCAC  58 407
APY29_RS21515 4777226 .. 4777261 +  -6.6  -3.20723   CCGGCCATCGCGTTG    CAACCGGCGCTAGCGC TGCA GGGCTGGCGCCGGGCC     TTGGGTTGATGCCAC  53 78
APY29_RS21535 NONE
APY29_RS21540 4785392 .. 4785406 +  -5.6  -4.21408   AACGAAACTGTCCGG               GGCAAG TGC CTAGCC               TTTGATTTTGCGATT  67 138
APY29_RS21575 NONE
APY29_RS21585 4793968 .. 4793978 +  -5.4  -3.05384   GAGTAGCACCTCAGT                 TTGG AGT CCAA                 TTCCCTACCCCAAGG  47 38
APY29_RS21595 NONE
APY29_RS21600 4795417 .. 4795464 +  -5.4  -3.75153   GGCCCTGGTCATTGC CGACCGCCTGCACTGGCCGCGAG GGG CCGGCGCTCACTGCAGGCA-TCG TTTGGGTTGGAACCC  58 106
APY29_RS21610 4797570 .. 4797613 +  -9.6  -2.62933   TCAATGCGGCCGGCT CGGTGCG-GCATGCGGCAC GCATGCA GTGCGGTATCCGCGCACCG TGGTGTCCACGATTG  56 97
APY29_RS21625 NONE
APY29_RS21630 NONE
APY29_RS21635 4802181 .. 4802212 +  -2.8  -4.19238   CGTCAACCTGCCCTG      CATCGCGAGCGCAT GCTG ATGCGCTGGCCCGG       TTTTGCGCTTGCCGC  61 180
APY29_RS21640 4803591 .. 4803616 +  -4.5  -2.87211   GGCAGGCAAGCTATG         CGGTCGCCGGC TGTC GCACGCCACCG          TCTCTCCAAACGAGT  44 104
APY29_RS21645 NONE
APY29_RS21650 4806437 .. 4806452 +  -4.6  -3.14132   TCCCCCTTCGCCCAT              CGGGAC CTCG GTCCCC               TTGATGGGGAGAGGG  48 6
APY29_RS21655 NONE
APY29_RS21660 NONE
APY29_RS21665 4810882 .. 4810918 + -18.1  -3.05816   GACACCTTGGGTGTG    CGCCGCCAGAGATAG CCAAGCA CTACCTCTGGCGGCG    TTACGTGGCACGTGC  90 247
APY29_RS21680 NONE
APY29_RS21685 NONE
APY29_RS21690 NONE
APY29_RS21695 NONE
        uraD 4818086 .. 4818099 +  -3.7  -2.79183   CAAGATCGTTCACCT               GCGCC TGGA GGCAC                TGTCATGAGCCTGGC  42 4
APY29_RS21705 NONE
        uraH 4819873 .. 4819908 +    -6  -3.06183   CTGCATATTGCCGCA    GCGCAAGCGGTTCGGA CCCT TCTGCACGGTCTGCGC     TTCCCTCGCACTGCC  49 44
APY29_RS21715 4820761 .. 4820773 +  -3.3  -3.66908   CAACCAGCACTCGTC                TTGCG CTG CGCCA                TTCGTTTTCGGACAA  51 293
        hrpB NONE
APY29_RS21730 4824672 .. 4824700 + -20.4  -3.01918   TTCGAAGCGGACCCC        CAACGCCACGGC CCTGC GCCGTGGCGTTG        TCGTTTATGGCATGC  93 48
APY29_RS21735 4828056 .. 4828087 +  -4.4  -3.81146   CGCGTGCGCGTCGGT      TCAGCGC-CGGCT CCAACTC GGCCGTGCGTTGG      TTGTTGCTTCAGCGC  56 149
APY29_RS21750 4830873 .. 4830894 +  -7.1  -3.54935   AGCGGCCGTGCTCAC           CCGACCGCG CATG CGCGGACCG            TTTGCGAGCCATTTC  59 117
APY29_RS21755 4832023 .. 4832046 +  -3.8  -3.05384   GGGGCGCCAGCGCCA          GTCATTCGTG ATCC CACACATGAC           TTCGGTGAACCAACA  45 108
APY29_RS21760 4833356 .. 4833410 +  -5.4  -3.73224   GAACAGCTGCCTATC GTTCAGCGGCACGCTGTCATCGGCCT GAT GGGCTGATGGCGGCCCGCCGAACACC TTTGCTGCGCGATAC  58 59
APY29_RS21770 4835551 .. 4835564 +  -3.7  -3.28712   ACGCGCGGCCGTCTT               CCCGC TGCA GCCGG                TTCTGCCGCAGGAAC  47 501
APY29_RS21780 4836674 .. 4836730 +  -2.5  -4.62069   CAGCGCCTTGTCCGA GGACACGGCACGGCCTTCGCGGCCGCC GGT GGCAGTGGCGTGGGCGGTGTAGAGGAC TTTTTCAGGTGAGGC  70 417
APY29_RS21805 4840540 .. 4840551 +  -2.2  -3.96624   TAGCATGAGCGTGCA                TTCC CGCG GGAG                 TTTGTGATGCGCCTG  57 106
APY29_RS21810 4842123 .. 4842137 + -11.4  -3.09327   AGCGGATGCCACAGT               CGCTGC ATC GCAGCG               TATTCGCTGGCATCG  66 373
APY29_RS21820 NONE
APY29_RS21830 4844373 .. 4844399 + -12.2  -3.65902   ATGCGTCCTGCCAGC         CGCTGGCGCGCA GGC TGCGCATCGGCG         TTTCCATCGCATAGG  77 277
APY29_RS21845 4847606 .. 4847633 + -14.1  -2.53382   CGCACTCATGGAACA        GGCACCGCCGC CGCGTC GCGGCGATGCC         TGGCTTGCGCGTCCT  71 62
APY29_RS21850 NONE
APY29_RS21855 4849670 .. 4849681 +  -2.2  -3.44552   CCGCTCCAGGAAAGC                GCAT GAGC GTGC                 TGTTATTGCTGGCGT  47 20
APY29_RS21860 4850212 .. 4850223 +  -3.6  -3.28712   GTCGTGTTTCTGGAG                GGCG ACCG CGTC                 TTCTGCAGCGCGAGG  46 230
APY29_RS21880 NONE
APY29_RS21885 4854887 .. 4854918 +  -6.4  -2.62616   GTGAGGTCATTTGGC      GCACTGCAGCCGCA ATGC TGCGGTGCCCGTGC       TGGTGTGCAGGCTGG  48 37
APY29_RS21890 4857235 .. 4857247 +  -3.3  -3.04652   TGCCACCGGAGTCCC                CATGC AAC GCCTG                CTTCTTGTTTCCAGC  43 124
APY29_RS21895 4859327 .. 4859340 +  -8.1  -2.73875   CGGAAGTAATTGACC               TGCGC AGCC GCGCA                TCGTATTCAGGGCAG  54 32
APY29_RS21905 4861239 .. 4861258 +  -8.5  -3.18264   CAGGCACGCACGAAC            GCCTGCG CCTGCT CGCGGGC             TTCCTGCGTACGCCC  58 62
APY29_RS21930 4869313 .. 4869339 +  -6.5  -3.32963   AGCGGCGATTCGGAG         CGTTGAGCCGT TCGAT ATGGCCCAGCG         TTATCGCCTGGCAAT  55 20
APY29_RS21935 4871056 .. 4871090 +  -2.7  -2.80074   CGCCCGCATCCGCTT     CCCCGCAGGGTTC CGTCATGTC GAACCCAGCTGAG     TCGTGTTATGCCCAA  39 156
APY29_RS21940 4871812 .. 4871824 +  -4.8  -2.64973   GCCAAGCCACCGGCG                TGCG CCATC CGCA                TGCTGTGCACTTACT  43 54
APY29_RS21945 4872422 .. 4872464 +    -6  -2.62184   ACCGCCGATTCGGCC ACCTGCGTCTGTTGCTGCGG CGA CAGCGGCGGCTGGCCCAGGG TGATCTGCGGCCAGA  46 248
APY29_RS21960 4874586 .. 4874619 + -24.1  -3.57263   TCACATGCGCACGAA     CAAAGACGGGATGGC CATG GCCATCCCGTCTTTG      TTTGCCAATCGCACT 100 314
APY29_RS21985 4880044 .. 4880101 + -18.3   -3.5525   CTCGAGCCCCTCTCC CGCCCACGCGCTTGAGCCCCTCTCCCG CCGG CGGGAGAGGGGTTGGGGTGAGGGGACG TTTGCGCAGATGTCT 100 320
APY29_RS22010 4885290 .. 4885304 +   -10  -3.15544   CCACTTGCTGCGCAG               TGCGGT TCA ACCGCA               TTGATGGCGCTGCCG  64 7
APY29_RS22015 4886071 .. 4886094 +  -7.4  -3.19659   AAGGTATCCAGAAGT          TGTC-GTGCCG AAT CGGCGCAGACG          TATCTTGTGGATATG  56 220
APY29_RS22030 4887494 .. 4887515 +  -7.1  -3.59262   GTGTGCGGGTGGGCG           GCGCCCAGC GCGC GCAGGTCGC            TTTCCACCTGTGCGA  58 154
APY29_RS22040 4889922 .. 4889932 +  -6.8  -3.65812   GAATCGCCGGCACCA                 GCAC CTC GTGC                 TTGTCTTCCAGCACG  61 222
APY29_RS22065 NONE
APY29_RS22070 4895247 .. 4895291 +  -5.6  -3.14344   TCGCCGGCGCAGTGC GGTCGATACCG--CGCAAGCCG CAA CGGCCAGCGATCGGTAGCCACC TTCGTGCGCGCACTG  51 306
APY29_RS22105 4903852 .. 4903877 + -19.1  -4.42062   TCCCGCGTTGCACTG         GAAGCCCGGTC CCCC GACCGGGCTTC          TTTCTTTAGGCGATC 100 71
APY29_RS22145 4909513 .. 4909527 +  -2.7  -2.69799   CAGCTTGCCGCCGTC               CGGCG CTGCA CGCCA               TGCTGTGTGCGATGA  39 57
APY29_RS22150 NONE
APY29_RS22155 4912098 .. 4912115 + -14.1  -3.05268   CAGATCGAAATCAAC             GCGCGGC CGCC GCCGCGC              TCTTCCAACTGCTTG  72 299
APY29_RS22165 4914754 .. 4914764 +  -6.8  -3.61398   AGAGCCTGCTAAGGA                 GACG CAG CGTC                 TTCTTCAGCCACACG  59 471
APY29_RS22170 4917461 .. 4917477 +  -2.1  -4.29738   CGCTGCTGCCGTCCG              GTGCGCT GCA ATCGCCC              TTTTCGTGGATGTGG  62 463
APY29_RS22210 4926192 .. 4926209 +  -3.3  -3.92542   TCGATCACCGGGAGC             CGCCGCA TGCG TGCCGTG              TTGTTTGCCCCTGCA  56 156
APY29_RS22215 4927384 .. 4927407 + -14.6  -2.75481   TTCAGGCCCTGGCGC          GCA-CCGGCCG GGC CGGCCGGCTGC          TGCTTGCCCTTGGGC  72 318
APY29_RS22285 4943940 .. 4943958 +  -5.3  -3.26319   GGGGATGGCCGGGCC             CTTGCGT GGAAA ATGCAAG             TTGATGTAAGCGATT  50 94
APY29_RS22290 NONE
APY29_RS22295 4945606 .. 4945653 +  -2.4  -3.64703   CGGCAAACGCGACGT CCTTGCCG-CCGACCCGCACGCG CTG CGCGCGCTGGCTGATCAGGAAGG TTTCGATGCGGCCGC  51 514
APY29_RS22315 4949104 .. 4949116 +  -4.7  -3.02144   TCAGCGGCAGTAAAG                CGGCG GCG CGCGG                TCTTCAGCGAACTGA  47 165
APY29_RS22340 NONE
APY29_RS22345 4955364 .. 4955377 +  -8.1  -3.91897   TGTCACCTCTGAAGG               CGCGT GGCG ACGCG                TTTGTCGCTCCAGAC  71 101
APY29_RS22350 4956975 .. 4956990 +  -8.2  -3.53012   TCATGCGGAACTGAG              CGGGCG TGGG CGCCTG               TTTCCAGACGCGCGC  63 89
APY29_RS22365 NONE
APY29_RS22370 4962379 .. 4962389 +  -8.2  -3.23216   ATCCCAGCACGTAGC                 GCCG CAG CGGC                 TTGCTGATCCTACGG  58 385
APY29_RS22435 NONE
APY29_RS22440 4978384 .. 4978407 +  -4.4  -3.89614   GCGTAGATCCACGCC          GTGCCGGTCG CAGA TGGCCAGCGC           TTTCTGCCGCTTGGC  61 272
APY29_RS22455 4982801 .. 4982817 +  -2.9   -5.0133   TTACTGACAGCGAGT              TAGCCCA CTT TTGGCTG              TTTTTTACACAAATC  78 92
APY29_RS22460 4983252 .. 4983263 +  -5.8  -3.37975   GTCGCGCGATATTTC                GGTG ACGG CACC                 TTCTGGGTGCTGGAT  53 291
APY29_RS22485 4995675 .. 4995707 + -26.4  -4.66833   ACTGTGCATGCGCAC      CGCCAGCGGCAGCC AGGAC GGCTGCCGCTGGCG      TTTTTGGGCTTGCGA 100 49
APY29_RS22505 5003183 .. 5003209 +  -6.4  -4.60889   TTCCTGCGTCAGTTT         TGCCTGCCTGAC CGG GTCGGGCTGGGG         TTTTTGCCGCTCCTT  78 514
APY29_RS22520 NONE
APY29_RS22525 5013947 .. 5013959 +  -4.7  -3.07113   ACCGCCCACCTGCAT                GCGAC GGC GCCGC                TTCGATGCCCTGATC  47 182
APY29_RS22550 NONE
APY29_RS22555 5018632 .. 5018648 +  -7.9  -2.77235   ATCCACGGCAGATGC              CGCCCGT GTC GTGGGCG              TACTTGAATCCTTCG  52 72
APY29_RS22560 5019185 .. 5019198 +  -8.1  -3.01712   CCAGGTGGCAGAGCT               CGTGC ACCA GCACG                TATTCGAACGCGGAC  53 302
        xylA 5024112 .. 5024132 +  -7.5  -3.07113   ACAGAGACGTGAGCG            CACACCGGC AAT GCTGATGTG            TTGCATGCAGTCCTG  54 160
APY29_RS22600 NONE
APY29_RS22605 NONE
APY29_RS22610 NONE
APY29_RS22615 NONE
APY29_RS22620 5035294 .. 5035326 +  -5.4  -2.60723   CTGACACTCTCGCCA      TGCGGCCGTGGGTA AACAA TCCCTTCGGCTGCG      ATTGCTTCAAAATCC  43 47
APY29_RS22625 5037006 .. 5037020 +  -5.6  -2.78816   TCACCTGCCCAATCC               GCAGCA GAT TGCCGC               TCTCATCGACGATGG  45 137
APY29_RS22635 5038067 .. 5038079 +  -6.2  -4.11484   CCAGGTTCGGATATG                GCCG GCCTG CGGC                TTTTGCGCGCTTGCG  67 231
APY29_RS22640 5039089 .. 5039102 +  -5.2  -4.02334   GTCGCTACGTGCGTC               GCGG CTCTGT CCGC                TTTCTGCTCTGGCTG  63 503
APY29_RS22650 5040191 .. 5040212 + -12.9  -3.15999   CCTGAGCGCCGCATG           CGCCGCGGG CTTG CCCGCGGCA            TTCAGTGTCTGCGGG  73 36
APY29_RS22700 5050141 .. 5050171 +  -5.3  -2.62735   AGGCCCAGCGACTTC       ACGCGCACGCG CGCCAGCAT CGCGTGCGAGG       TCATGTACAGCATGT  44 66
APY29_RS22745 5064112 .. 5064140 +  -6.7  -4.08692   CGTTCCTCCCAGCGG       CGACCGGTGGCGC AATGC GCGCCGC-GG-CG       TTTTCCACAGCATTC  67 61
APY29_RS22750 NONE
APY29_RS22755 5066873 .. 5066889 + -10.8  -3.74693   CGACCCGGTGCTCAT              CGCGCG TTGAT CGCGCG              TTTCCTGGCATGCGC  76 169
APY29_RS22760 5067958 .. 5067984 +  -3.7  -3.56837   AGGTCTACACCTTGC        TGTGCGATATGC CAGA GCGTGTCGC-CG         TTGTCGTCTTTGGGA  51 373
APY29_RS22770 5068819 .. 5068839 +  -8.2  -3.56216   CCATGATTCAAGCAA            CAGCGGCA ATCGC TGCCGCCG            TTATCTCGGTTAATT  65 46
APY29_RS22775 NONE
APY29_RS22780 5070438 .. 5070448 +  -5.4  -3.05384   GAGTAGCACCTCAGT                 TTGG AGT CCAA                 TTCCCTACCCCAAGG  47 60
APY29_RS22785 5071605 .. 5071634 +  -9.3  -3.36878   ATGGCAGGCGTGATG       CCGCCGAGCGCC ATATTCG GGCGCTCG-TGG       TTGTACGTCCATAGC  63 100
APY29_RS22795 NONE
APY29_RS22815 5076611 .. 5076646 +  -5.3  -4.47686   GAGATGGAGCTGGTT    CCCGACGAGCCGGCGT AGCAC GCGCCTGCG-GTTGGG    TTTGCTTTTTTGTGG  71 8
APY29_RS22835 5082107 .. 5082125 +  -5.8  -2.53876   GGCCGTGCGCCTTAC             CCCGGCGC GCG GCGCCACG             TGCGTTGACCTGGAG  45 84
APY29_RS22840 5083211 .. 5083224 +  -3.8  -3.05066   GGACATTGACAACGA               TGCG CCGCAT CGCA                TCTTCACGAATTATT  45 32
APY29_RS22845 5086614 .. 5086628 +  -7.1  -2.79694   CTCTTGTTGTTCTTG               CAGCC CTCGC GGCTG               TCGTTGCCTGTTGTC  49 229
APY29_RS22850 5089802 .. 5089827 + -20.5  -2.91264   GGGCATGTGGTCTGT         CGAACGGGGCC AACT GGCCCCGTTCG          TGTGTCCGTCCGCCG  93 68
APY29_RS22855 5091717 .. 5091733 +  -8.1  -3.80733   AACGAGGCTTTCACG              TTAAAGC AAT GCTTTAA              TTGTTGTCGCATAAG  69 357
APY29_RS22875 5094486 .. 5094517 +  -8.7  -2.78816   GATCGATCGGCAGCA     CCCGCCGACGCCTGC AATG GCAG-CG-CGGCAGG      TGTGCTGCAGCATCG  54 39
APY29_RS22895 5099783 .. 5099793 +  -4.6  -3.85698   CACGTCGGCACACGC                 TGCG CGC CGCG                 TTTGTCGACAGCCAC  60 242
APY29_RS22900 5101571 .. 5101595 +  -6.4  -3.68351   CGATAGCCCTTGAGC         TCGTG-CAGCG GGCG CGCCGACACGA          TTTCAGTGGTGCCGC  59 353
APY29_RS22945 5113236 .. 5113256 + -13.9  -3.09516   GAACATCAGCCGGTG            CGCGGCGCC CTT GGCACCGCG            TTCGATAATGGCCAC  73 388
APY29_RS22980 5121385 .. 5121412 + -17.7  -3.30124   CGTTTGCGGCGCGCC        TGCGGGGCGCC TGTCTT GGCGCCCCGCG         TTGTGGCCGGTGACG  93 122
APY29_RS23005 5129459 .. 5129486 +  -9.8  -3.39668   CCAGGCCGACTGAGT        CGGCTGTCG-GCG TCG CGCGCGACGCCCG        TTGTGCCCTTTCCGA  68 28
APY29_RS23010 NONE
APY29_RS23015 NONE
APY29_RS23020 NONE
APY29_RS23025 5134364 .. 5134374 +  -8.2  -3.59946   TTGGGGTGAGGTACG                 GGGC GAA GCCC                 TTGTGTCGTTCCAAC  65 32
APY29_RS23035 5136429 .. 5136448 + -11.4  -2.52635   ATGACATGGATCATC            GTGGCCGC CGTG GCGGTCAC             CTTGCTGGTGGGGCT  62 223
APY29_RS23040 5138069 .. 5138125 +  -7.9  -3.20723   CCGTACACCGCGAAC GCCAGTGCTGCCACCGCGATCAGCAGC ACGGC GCTGCGCACCGCCGTGGC--CACCGGC TTCCATTGCTGCCGG  54 415
APY29_RS23050 NONE
APY29_RS23055 5139862 .. 5139894 +   -15  -2.62184   GTGCTGACGTTGCCT      GAGTGCTTGCACTT CTCTA AAGTGCAAGCACCC      TGATGTCACCGGGAG  74 117
APY29_RS23060 NONE
APY29_RS23065 NONE
APY29_RS23070 5141900 .. 5141911 +  -4.4  -4.75404   GCTTGCAACCGAACG                TTCG TCAT CGAA                 TTTTTAGTGCGCTTT  75 143
APY29_RS23080 5145702 .. 5145729 +  -8.3  -2.61264   GCCTGCCGCAACCGC        ACCGCGCCTGC CAGATC GCATGCGCGGC         ATTGTCGGTCGGGCA  53 86
APY29_RS23090 5147312 .. 5147328 +  -5.2  -3.91689   GCGCTTTTTTTCGGA              TATCTG AAAAC CAGATA              TTTCGTCTGATTTCT  60 447
APY29_RS23105 5150184 .. 5150209 + -14.7  -3.48593   TCAAGTAAGTCGCAC         TGCGCGTCCTC TGGC GGGGACGCGCG          TTGTGTGGCCGAGTG  83 33
APY29_RS23130 5158709 .. 5158731 +  -7.6  -4.11692   CGGATGAATGCGCCG           AAGCGAGCTG GAG CAGCACGCTG           TTTTCGAGATGGCTG  72 130
APY29_RS23135 NONE
APY29_RS23140 5161431 .. 5161444 +  -2.3  -4.84359   GGATGCCTTCCCACA               GGCCT TTCA AGGCG                TTTTTCTGGACATCG  74 490
APY29_RS23175 NONE
APY29_RS23180 NONE
        mlaD NONE
APY29_RS23190 NONE
APY29_RS23195 NONE
APY29_RS23200 5177717 .. 5177734 + -12.7  -5.64274   TGATGAACGTCGAAG             CCCGGGA GCGA TCCCGGG              TTTTTTTGTCGCTGC 100 61
APY29_RS23230 5183369 .. 5183379 +  -2.4  -4.18018   CACGTGCCATTGCAG                 CGGC CTT GGCG                 TTTTCGGTGCGCAGA  59 161
APY29_RS23235 5183861 .. 5183890 +  -8.5  -3.05463   CGTGCATGCAATTGG       CTGCGCACGCTGCA TCA TGC-GCGTGCGGCG       TTGCCTGCAGCGCGT  55 99
APY29_RS23245 NONE
APY29_RS23250 5185245 .. 5185261 +  -6.5   -4.0825   TTTGCTGCGCTGCGT              TGGGCGA CAC TCGCGCA              TTCTTTGATTCCCGC  67 197
APY29_RS23255 5186849 .. 5186877 + -13.7  -2.59431   AGCGCGGGCGCTCCA        CGGCACGCGCGCC AGT GGCGCGCAAGCTG        TGCCTTCTCGCCCCG  71 173
APY29_RS23285 5196653 .. 5196684 +   -26  -3.68529   GATGGCGTAGCAATG      TGCGGCACGCGTGG TTTT CCACGCGTGCCGCA       TTTCAGTCGTCGAGT 100 54
APY29_RS23300 NONE
APY29_RS23305 NONE
APY29_RS23310 NONE
APY29_RS23315 5200772 .. 5200810 + -10.9  -3.57144   ACCGATCAATGCCCT  GCCCTGCCCCGCGTAGGC GCGT GCCTGCGCGCGAT-GGGC   TTTACCGATACAGCC  73 62
APY29_RS23330 5205613 .. 5205653 + -10.5  -3.65351   GCGACAGTTTGCGCC CGCATC-GCCGTCCACGCA GCTGA TGTGCGG-CGGCAGATGCG TTTGGGTGCGGCTGA  70 88
APY29_RS23355 NONE
APY29_RS23350 NONE
APY29_RS23345 5209971 .. 5209988 - -14.1  -3.95073   GCTGACATGCAGAAA             GCCCGCC TTGC GGCGGGC              CTTCTTGAACTTACT  86 36
APY29_RS23340 5207100 .. 5207124 -  -6.3  -3.60296   CACGTGGATTTTAAA          CGGCGCGGC CAGCAGT GCCGAGCCA          CATGTTTGCGGGCAC  59 112
APY29_RS23335 5205460 .. 5205486 -  -4.3  -3.12327   CCGCGAGATCGAACA        GGCGCAGGCCAA GCAG CCGGCC-GCGTC         ATCGGTGGCTGCGTG  47 252
APY29_RS23325 5202149 .. 5202169 -  -6.2  -3.36581   GAAATGGGTAAGCAA            TCGCAAGA CCGGC TCTTACGA            TTCCCCAATCCCGAT  52 56
APY29_RS23320 5200555 .. 5200567 -  -3.3  -3.76373   CCCGCAACAGGCAAA                GCCGC GCT ACAGC                TGGGAAGACGAGGAC  56 319
APY29_RS23295 NONE
APY29_RS23290 5196651 .. 5196686 -   -19  -3.14931   CCGATGGCGTAGCAA    TGTGCGGCACGCGTGG TTTT CCACGCGTGCCGCATT     TCAGTCGTCGAGTTC  93 26
APY29_RS23280 5194090 .. 5194103 -  -4.5  -5.00884   ATCGCTTGTAAAAAA               CGACGG CAG CCG-CG               GATAGAAAAACGACA  81 149
APY29_RS23275 5190874 .. 5190896 -    -9  -2.71712   TCCGTCTGCGCAAAG           CCTGCGCGGA CGG TCAGCGCTGG           TCGCTGGTACCCGTG  57 16
APY29_RS23270 5190305 .. 5190324 -   -15  -5.29782   GACACCTACAAAAAA            GCCCGGTC ACAA GACCGGGC             TTGGCAGCAGGGCGT 100 69
APY29_RS23265 5189505 .. 5189545 -  -7.6  -3.12847   AAGCCGCAGATGGAA GGCGCGTGCGTGCCGCTGCA ACA CGCAGCGA-ACG-ACGCACG AACAGACACGCGCGG  56 69
APY29_RS23260 5186783 .. 5186793 -  -8.2  -2.74192   CAGGGGGTAACACGA                 GGGC TTT GCCC                 CGTCCCCTCACCCCC  54 228
APY29_RS23240 5183310 .. 5183328 -  -6.6  -2.87132   TGCGGTGCGTACAGA             GGCACGTC ATC GGCATGCC             ACCGCGCCGTCTGCC  50 438
APY29_RS23225 5181097 .. 5181130 -  -6.5  -3.01712   GCGCTTGTCGCAACA     GCTGCGTCACGCCTG CTGG CCGGCGTGATCCTGC      GCACGCGCTGCAGGA  51 92
APY29_RS23220 5179364 .. 5179384 -  -5.3  -3.07013   GATCGGCGCAAGAGA            GCATGCCGG AGA CCTGCATTC            GTAGGAGCGCACCCG  47 127
APY29_RS23215 5178782 .. 5178823 -    -8  -4.01888   AGCCCAGAGCATAAA CGGCCACGGTGAGGCGAGCG ATGC CGCTGGC-TCAC-GCGGCTG GCAGTTGTCTGCAGC  70 101
APY29_RS23210 5178176 .. 5178197 -  -3.7  -3.15212   AAGTAGTACAGCCAA           CGCTGGCG CTGACTC CGCCA-CG           CACTACCCAGCCAAC  47 28
APY29_RS23205 5177819 .. 5177839 -    -9  -2.73875   CTGCCGGGAATATTA           CGTGGCGGC GTAC GCCGCCA-G            AATCGCCTGCTGGAG  57 2
APY29_RS23170 NONE
APY29_RS23165 5172487 .. 5172535 -  -6.6  -3.70902   GCGCTGAGACGCAAA GGTCGCACGGCATC--GCGCACCG GCG CTGCGCGAAAGATGCCGATCGACC GCGCGCGCGTCCCGC  62 248
        recC NONE
        recB NONE
APY29_RS23150 5162523 .. 5162553 -  -7.5  -3.60348   GGCAACACGACAGAA      CCG-GTGCTCACGC TCAT GCGTGCGCACGCTG       CACGAAACAGTCGCG  62 504
APY29_RS23145 5160967 .. 5160993 - -10.9  -3.35639   AAGAGGGGCAAGTAA        GCGCCTGGCCTG TTGG CAGGC-AGACGC         AATTGGAGGGGAAGC  69 101
APY29_RS23125 5157674 .. 5157707 -  -3.9  -3.05844   TTGTCGACCGGAATA     GT-GTCGATAGGTC GAATGGT GCCCCATCGACCAC     GTGAAACGTGTGCGC  45 50
APY29_RS23120 5157043 .. 5157063 -  -5.3  -3.23711   CCGAGAACCGATCAA            TCCGCTCCA GCG TGGCGCCGA            ACCTGTAGCGCGGTA  48 153
        atzF 5154675 .. 5154724 -  -3.4  -3.06815   ATTTTCTTGAACATA TGGCGTGCTCCGGGC-GATGC AGCGGTTTG GCCTCCGACCGGAGCCCACCG CGAATGGGTAGGTGA  43 58
         uca 5150704 .. 5150739 - -19.2  -3.91144   GCGAGACCGGAGAAA    CGGAGTCAGGTTGACT TTTT AGTGAACCTGACTCCG     TTTCTTCATTGATAC 100 312
APY29_RS23100 5147354 .. 5147372 -    -8  -2.75064   TTTCTTAGCGAAGCA             GGCGCGCG CGT CTCACGCC             GATTTTGTCGGTTCG  52 19
APY29_RS23095 5146726 .. 5146740 -  -2.7  -3.75897   AACCCGGAAGTGAAA               GCCGG ATCCA CCGTC               ATCGCCAAACAGATC  56 204
APY29_RS23085 5145655 .. 5145691 -    -8  -2.62396   GAGCGGCTGAGATCA   CCGG-GTTGCACGCAGCG CTA CG-TGCGTGCACCGCCTG   CCGCAACCGCACCGC  51 79
APY29_RS23075 5142117 .. 5142143 - -10.9  -3.15861   CATCATTTTGAGCAA         CGCGCTCCT ATACTCTGA AGGAGCGCG         GGCAAAGCTTAGTTT  67 382
APY29_RS23045 5137511 .. 5137550 -  -5.6  -2.70932   GTTCCGCCTCAACGA  CGAGGCCAGCCTGAATGTC TAC GAC-CGCACGCTGGCCGCA  CGCATGACCGAGGTA  45 180
APY29_RS23030 5134282 .. 5134306 -  -2.8  -4.07568   CGTGTTTGCGCAAAA         GGCG-CCGCAT ACCC ATGGGAACGCC          GACACTCGGCCGCCG  59 195
        folE NONE
APY29_RS22995 NONE
APY29_RS22990 5125769 .. 5125781 -  -4.7  -3.58726   GGCCGGCAGAGACAA                CCCGC AGG GCGGC                GCGCATGGATGCGCG  55 338
APY29_RS22985 5121326 .. 5121353 - -19.2  -2.76162   CAGCGTAGTCGAAAC        GGCGACGCCACC TGCA GATGGCGTCGCC         CCTGAATTGTTTTCA  87 38
APY29_RS22975 5119938 .. 5119950 -  -2.6  -3.34398   TCGTCGGGCGAAACA                GGCC TGATG AGCC                GCGCATCGAGGGGCG  45 94
APY29_RS22970 5119418 .. 5119457 -  -4.9  -3.36749   CAGTCCCAACACGAA  CGGC-AACGCGCCCCG GGACAGCGT CATGGCGCGATGGCCG  GCGGGTGGGCAGACG  50 191
APY29_RS22965 5117031 .. 5117065 - -11.2  -2.61264   CCCCGGAGCGAGAAG     GCACGGCTGGCGCGCC ACT GGCGCGCGTGCCCTGG     AACGCCCGCACCGTA  62 242
APY29_RS22960 5115516 .. 5115557 -  -9.6  -5.04325   CGCAAATCAGAAAAA GCAGACGCG-AGCGCAAGCT GAAT AGGTTG-GCTTCACGTCTGC GCCGCGGGTGTGGTG 100 16
APY29_RS22955 NONE
APY29_RS22950 5112862 .. 5112878 -  -2.2  -3.73224   GCATTGCGGACGAAA             GCAGCGC CTTA GCAC-GC              GTGCCCGCTGATGGA  52 101
APY29_RS22940 5109296 .. 5109312 -  -4.3  -3.06796   TCCCAGCTGAGCTAA              GGCCCCA TGA TGGGACT              TTCGCATACCGGCCT  45 110
APY29_RS22935 NONE
APY29_RS22930 5108910 .. 5108927 -  -5.5  -3.54475   CGCTTGACCATATAA             CCCCAAG TTGC CTCGGAG              CTATCTGTCGTGTTG  57 229
APY29_RS22925 NONE
         rrf 5105742 .. 5105772 - -18.4  -4.57341   AATTCGGCGCAAAAA       GAAACCCTCAGTCC ATT GGACTGAGGGATTC       GGGGTAAAGCCCCTG 100 36
APY29_RS22915 5104696 .. 5104719 -  -4.5   -3.3197   AGACTATCGCGACAA          CGTCAGCGGT CAAGC ACCGC-GCCG          GCTTGATATGGCGCT  48 40
APY29_RS22910 NONE
APY29_RS22905 5101279 .. 5101298 -  -9.2  -4.17048   CGTCCCGCAAAACAA            GTGCGCCA AAGG TGGCGCTC             CAGCCGCATGCGGCA  79 138
APY29_RS22890 5096688 .. 5096713 -  -6.1  -3.20218   TCATGAAAAACCAGA         CTGCC-GTGCCG GCG CGTCACTGGCAA         GCGATGAGCGGCAGG  51 66
APY29_RS22885 5095986 .. 5096031 -  -8.2  -3.14931   CGCAGTGCCCAGCAA TGGCGACGCCCGC-CCGACGGC ACGC ACCGTCGTTGCAGGCGCC-CCG TTCCAAGCACGCGCT  58 116
APY29_RS22880 5094578 .. 5094615 -  -6.1  -4.46212   TGCCTGATCACAAAA   CACGCACCACCGCACGC AGAG GCATGCGGCATCGCCCG    CCAGATCCACACTGC  74 161
APY29_RS22870 NONE
APY29_RS22865 NONE
        pyrF 5091606 .. 5091628 -  -9.1  -5.76949   GACGGCCAAAAAAAA           GGATCGGGC ACGAG GCGCGATCC           CTTCGAAAACCGGGA 100 186
APY29_RS22830 NONE
APY29_RS22825 5077916 .. 5077931 -  -4.6  -3.05384   GCTGCGCGCATGCAA              GTCTCC TGCC GGCGAC               GCCCGTGGTGCAACG  47 198
APY29_RS22820 5076547 .. 5076562 -  -6.8  -3.27994   CGAACTGCAGATGAA              GCGCCT GAAG AAGCGC               AAGCTGCAGATCAAG  54 394
APY29_RS22810 5075607 .. 5075619 -  -3.3  -4.65895   TTCCCTATCCAAAAA                GTCAG TAT CTGCC                ATCTGCATTAAGCCT  69 106
APY29_RS22805 5074551 .. 5074563 -  -3.3  -4.08216   TGAGTGCGCTTAAAA                CGCTC ATT GATCG                AGAAAGTGTTTAGAA  58 330
APY29_RS22800 5073426 .. 5073436 -  -2.4  -4.40358   AGCTACTGGAGAAAA                 TCCG CAG CGGC                 GTTCGCGGCCTCGAT  65 523
APY29_RS22790 5071033 .. 5071080 - -17.6  -2.66373   AAGCGCAAGAAGGTA CCGGTTGGCGAGCGTCAGCCGC TGCT GCGGCCAGCGCAGGCCAACCAG GTCTGGTCGATGGAC  85 513
APY29_RS22765 5067459 .. 5067493 -  -2.8  -3.70902   CGGGGTATACGCAAA    CCA-TCGT-GGCGCGC AGCAA GCGCGACTACGTCTGG    TACATGGCGCGCACT  53 201
APY29_RS22740 NONE
APY29_RS22735 5058313 .. 5058323 -  -6.8  -2.67694   AGCACGATGACATGA                 TGCC TGC GGCA                 TAGGGTCAGGACACC  48 79
APY29_RS22730 NONE
APY29_RS22725 5056875 .. 5056885 -  -4.6  -2.65264   GCATGATCGATATCA                 GCCC TAT GGAC                 AATAAATGGGAACCC  43 44
APY29_RS22720 NONE
APY29_RS22715 NONE
APY29_RS22710 5051221 .. 5051231 -  -8.2  -3.14931   CCTAGCGCCGACCAA                 CGCG TCG CGCG                 CACCCATCTGTGACG  58 151
APY29_RS22705 5049923 .. 5049942 - -13.6  -3.06183   TCCATCGCGACGCAA            GGCGATGC AGCG GCATCGCC             GCGATCGTCTGGAGC  70 193
APY29_RS22695 5048923 .. 5048940 -  -8.3  -3.36327   GGATGTGAGTGAGAA             CCGTCGC GATC GCGGCGG              TCGGTGCTGCGCGCG  60 60
APY29_RS22690 NONE
APY29_RS22685 NONE
APY29_RS22680 NONE
APY29_RS22675 NONE
APY29_RS22670 NONE
APY29_RS22665 5042352 .. 5042393 - -14.3  -3.65425   CGCACACACTGGAAA CGGCACCGCGGCCGTCGCGC CAG ACGCGCCGGC-GCGCTGCGG CCTATCCCGCACACG  85 48
APY29_RS22660 5041106 .. 5041147 -  -9.3  -2.62184   GCGTCGGCCAGACCA CCGCGACTGCACCTGCGCCG TTG CGTCGCTGCTGCA-TCGCGC CGGCCAGGCGGCGTC  56 150
APY29_RS22655 5039975 .. 5039999 -  -6.4  -3.53012   TGTTGGGCGGCGAAA         GCACGGCCCAG GTCG CCG-GCCATGC          CGAAGTGGAGTCCTA  56 340
APY29_RS22645 NONE
APY29_RS22630 5036552 .. 5036597 -  -5.4  -3.21934   CGGCTCGCAGAAAAT TCCGGT-GCGACTGC-TCGGCA CGAT CGGCGATGCACTCGCTACCGGC CAACCGATCCGGCAC  51 405
APY29_RS22595 5023959 .. 5023969 -  -5.4  -3.21938   TGAAAACCTGATCAA                 TCAG TAT CTGA                 CGCGTTGAGCCTTGC  48 247
APY29_RS22585 5022224 .. 5022241 -  -5.5  -3.75766   GGGAGAAGGGAACAA             GCC-CCCG TTG CGGGAAGC             GCGCGCCCTGCTCCA  60 142
APY29_RS22580 5021164 .. 5021195 - -10.8  -3.55444   TGTGGAGGGTGGAAA      GACTGCCGGCGTCCG GAT CGGCCG-CGTCAGTC      GCTGTCGTGTGTGGC  73 20
APY29_RS22575 NONE
APY29_RS22570 5019831 .. 5019851 -  -5.4  -2.85668   CATGCGCACAGGATA           CCGCCGCGA TGTG TCA-GGCGG            TGAGACGCGTTGATT  46 18
APY29_RS22565 5018998 .. 5019008 -  -2.4  -3.54129   TACACTGCCGCGAAA                 GGGG CTT CACC                 GCGGCCTTGCGCGCT  49 50
APY29_RS22545 5015663 .. 5015683 - -13.9  -2.82987   GGAAGACGCAGGATA            CCCCAGCGC ACC GCGCAGGGG            GATGACAGTGCGTTA  74 38
APY29_RS22540 5015381 .. 5015408 -  -9.8  -2.62792   ACCTATGTCAAACAC        CGACGCCGCTCCG GAT CAGCGC-GCGTCG        CGGTCGCGTTCGGCC  59 13
        tatB NONE
        tatC 5013810 .. 5013864 - -15.5  -3.15544   GCGCAGCCGTAGGAA CGCACCTGGGCGCGACCGGGGCTTC TCGAC GTAGGCTTCGTCGCGCCCGGGTGCG CTCCTACATGGACGA  83 181
APY29_RS22515 5011659 .. 5011688 -  -4.2  -3.36273   CTTCGTCAACACGAA       GCGCCGACGACGT GTGCG ACACCG-CTGCGC       GTTGGGCCCATGGCC  48 41
APY29_RS22510 5002898 .. 5002936 -  -8.9  -3.04263   ACGCCATCTCCAACA  CG-TCGCGGTCGATCGCCA TGA CGACGATCGAC-GCGTTCG  CCCGCGCCTGCGAGC  57 170
        glyQ 4999872 .. 4999899 -  -8.5  -2.53012   AACTGCATCAGCAAG        TCGCCGGCATCA GCGTT TGACGCCGG-GA        AAGCCGAGCTTCTCG  53 7
APY29_RS22495 NONE
APY29_RS22490 4995473 .. 4995493 -  -3.3  -3.17723   CCACGTTCAATGCAA           CGCTGGAC TACGCG GTC-AGCG            ACGATATCTCGCTGA  44 427
APY29_RS22480 NONE
APY29_RS22475 4986907 .. 4986923 -  -7.3  -3.14132   GGCGCCGCTGACCAA              CGTTGCT GTT AGCAACA              GGTATTGCAGACCCG  56 193
APY29_RS22470 4985705 .. 4985719 -  -6.4  -3.53091   ACTCCGCTCTGTAAA               CATGCC ATG GACATG               AGGAACGTTAAGATC  57 489
APY29_RS22465 4982552 .. 4982602 - -11.9  -4.13945   AGTTGGAGGGTAAAA CGCCCGCGTACCAGTAT-CGGG-GG CGG CCTCCCGGATCCTGGTACGCCCACG GCTGCCGACCTGGCA  82 447
APY29_RS22450 4979350 .. 4979360 -  -6.8  -3.61894   AATTCCTTGCAACAA                 CGTG GTC CACG                 AGCATGGCCCCGCCG  59 67
APY29_RS22445 4977883 .. 4977905 - -13.4  -2.57132   CTGGTGTTCGACAAC           GTGCGCCAGC CGG GCTCGCGCAC           CGGCGATGGTGCCGA  67 303
APY29_RS22430 NONE
APY29_RS22425 4973401 .. 4973414 -  -5.2  -3.63627   CGGCGATATCGGAAA               CGCG GTCCAG CGCG                CGTTGCAACGGCGCG  55 83
APY29_RS22420 NONE
APY29_RS22415 4971607 .. 4971617 -  -4.6  -3.66018   TTACCACGCGAACAA                 GCCG TAC CGAC                 CGCCCGTTTGCCGTT  55 65
APY29_RS22410 NONE
APY29_RS22405 4968638 .. 4968650 - -10.5  -2.63073   TCCTGGGAAGAATAT                GGCGC GTA GCGCC                GGATGAGGGAGCGCC  59 51
APY29_RS22400 NONE
APY29_RS22395 4967332 .. 4967352 -  -4.5  -4.15222   ACCGGCTTGAACAAA            GCGGCGTCA TGG CGCGGCCGC            CTGCGTGCAGGCGCG  63 53
        kduD 4966413 .. 4966424 -  -5.8  -3.41878   CTCCCGAAGGGAGAA                GGAC AGCC GTCC                 ATGCGCGAGCGTTTA  55 38
APY29_RS22385 NONE
APY29_RS22380 4963917 .. 4963958 -  -2.7  -3.02144   TCATGCCGCGCAATA CGCGGCGATGGCTGCCGGC CTGG ACCGACTGACACCGCAGTA  CAGCGATGGGCGGCG  41 82
APY29_RS22375 4962084 .. 4962100 -  -2.2  -3.60296   GATGTCGACGCCAAA             CGCGCGA TCTA CCGC-CG              GCACTGTGCATCATC  49 17
APY29_RS22360 4959656 .. 4959703 - -10.6  -3.53012   GCGTCCGTCTGGAAA GCGACGGCACG-CCGGTGCA-CC TTGCC GGCTGCACCGGGCGAGCGG-CGC CCTGCCTAAGCCACA  68 56
APY29_RS22355 4956876 .. 4956886 -  -5.4  -4.56597   TCGCGTTGGGAAAAA                 TTGC GCG GCAA                 GGACGAGGCCTGCGT  74 380
APY29_RS22335 4951860 .. 4951874 -    -7  -2.82015   TGTACACGCACCACA               GCGCGC CTG GCGCCC               GCTTTACGCACCACT  49 29
APY29_RS22330 4951486 .. 4951499 -  -5.2  -3.78953   ATGCGCATCAGCAAA               GCGC ACATCA GCGC                GGCGGCGCGAGCAAT  58 19
APY29_RS22325 4950667 .. 4950711 -  -4.9  -2.54634   CTGCAGATCAGCAAC GCCACGGCGATGAGCGCACG CGCCAT CATGCGG-CATCGCCAATGC TGCGCTGGGCGGTGA  43 6
APY29_RS22320 4948989 .. 4949015 -  -6.6  -3.05596   CACGCCGGCATCGAA        GGCCCGGCATC TGCAGC GATGC-AGGCC         TGCGCGCGGTCAGTA  51 233
APY29_RS22310 NONE
        egtD NONE
APY29_RS22300 4945170 .. 4945182 -  -4.8  -3.59979   GGGCGTCAGTCGAAA                TGCG GCCCG CGCA                TCAGGCGAATCGGTC  55 3
APY29_RS22280 4939310 .. 4939328 - -10.2  -3.14132   TCCGCGCCGCAGGAA             CTCCCCGC AGC GCGGCGAG             GCACTTACGGAAACG  64 30
APY29_RS22275 4937745 .. 4937756 -  -7.2  -3.64487   CCACAGCTCGAACAA                GCGC AAGC GCGC                 GCAGCACTACCGCGC  62 66
APY29_RS22270 4937552 .. 4937563 -  -5.8   -3.5936   TCGAAACGCGTTAAA                CGCA CTGC TGCG                 GGACAGCCGACGACA  57 9
APY29_RS22265 NONE
APY29_RS22260 4936357 .. 4936374 -  -4.7  -3.20858   GATGACACGGATCAA             GGCCACC AGAA GGCGGTC              AGGCGGGCGATGTCC  48 4
APY29_RS22255 NONE
APY29_RS22250 4933536 .. 4933561 -  -4.6  -3.09492   GCCGGAAGCGCAAGA         GCATCCTGCC GCCTGG GGTGGGATGC          AACTGGGCAGTAGTA  47 226
APY29_RS22245 4932975 .. 4932989 -    -7  -2.63102   ACCATTGTGACAGCA               GCGTGG CCG CCGCGC               AGTGCCGGCAGCGGA  48 76
APY29_RS22240 NONE
APY29_RS22235 4931073 .. 4931090 -  -3.3  -2.62184   GTCGTCTCGACATCA             TTGGCGC GCTG ACGCCAG              CCGCTCGGCCACCCA  39 5
APY29_RS22230 4930683 .. 4930697 -  -2.8  -3.85698   CGGGTCCCGGACAAA               CCGCTA TTG TAACGA               TGCGCGCTGCGGCGG  56 114
APY29_RS22225 4928216 .. 4928233 -  -4.1  -3.57144   GGCGTTATCGGTAAA             GCCAC ATCAGTCG GTGGC              GACGCATCGTCGGTG  53 379
APY29_RS22220 4927073 .. 4927108 - -16.9  -2.57132   GCCGTTGGCCACAAC    CGGCCCCGCGCCGACC TGACC GGT-GGCGCAGGACCG    TGCGTTGCCGTCAGC  83 36
        glnA 4923385 .. 4923407 -  -6.8   -3.9243   GAATGGTGGAAAGAA           TCGGCCGGCA TTG CGCCGCCCGG           CGGTGTCAGTCACCT  65 254
APY29_RS22200 NONE
APY29_RS22195 4921485 .. 4921515 - -14.7  -4.09685   GGCGACGGGGGAAAA      CGGACCCGGCTGGG CGGT CCCGGCCGGGT-CG       TTGCGCCACCCGCGG  93 65
APY29_RS22190 NONE
        ntrC 4918480 .. 4918523 -  -9.1  -3.56092   TGATCAGGCTGGAAA CCTATGCGGGCGCATGTTCACG TGT CATGAA-ATGCACCCGC-T-GG CAGCGCAGGAGTTTA  68 317
APY29_RS22180 4917819 .. 4917834 -  -8.2   -4.1673   GAACTCCTGAAGAAA              GGCCGC AACT GCAGCC               GTTGATGCCCCGACT  76 40
APY29_RS22175 4917112 .. 4917145 - -16.7  -3.05596   GATTCTGCGACTGAA     GCGTTGCGCCGCGGC CTGG ACCATGGCGCAACGC      AGAGCACTTACTTAG  84 33
APY29_RS22160 4911833 .. 4911861 -   -16  -2.89564   CCTGTAGTGGAGACA        GCGGCGGTATGC GATGT GCGTACCGCCGC        ATTGCAGCCCCAAGA  83 204
APY29_RS22140 4907631 .. 4907673 -  -9.8  -3.07575   AAAACCGCCAGCCAA CGAC-CGCGCAACCGCCAG GCAGAA CCGACGCCTGCGCGCGCCG GTTTGTTTGCCGCGC  62 40
APY29_RS22135 NONE
APY29_RS22130 NONE
APY29_RS22125 4905880 .. 4905896 - -10.1  -3.66654   GATGCGAACGTGAAA              GCGCGAG TCT CTCACGC              CAGCAATGGGGGCGT  70 63
APY29_RS22120 NONE
APY29_RS22115 NONE
APY29_RS22110 4904064 .. 4904082 - -13.1  -4.96848   GCGGCCACACAAAAA             CGCCCGG TCGTG CCGGGCG             TTGTGTCGTGCATCT 100 77
APY29_RS22100 NONE
APY29_RS22095 NONE
APY29_RS22090 NONE
APY29_RS22085 4897272 .. 4897290 - -10.2  -4.59773   TGTTACTCCGAAAAA             GGACCGGC ATT GCCGGTCA             AGCCGCTGGCCACGC  95 92
APY29_RS22080 NONE
APY29_RS22075 4894810 .. 4894829 - -10.6  -2.71712   GTTCGGTCCGGAAAC            CCGCGGCC TACC GGCCGAGG             TGCTGGAGTCGATTC  60 511
APY29_RS22060 NONE
APY29_RS22055 4891964 .. 4891992 -  -8.7  -3.39595   CGCAACCAGGGAGAA        GTCCAATGCCGGC TCC GGCGGCAGTGGGC        TGGGCACGAACGCTT  63 210
APY29_RS22050 4890892 .. 4890904 -  -3.3  -3.72576   TGGTGTGCGAGGAAA                TCGCT CAC AGCGG                TTGCGCGCCTTCGCT  54 17
APY29_RS22045 4889761 .. 4889788 - -10.6  -3.61398   TCGTGCTGGCAACAA        GCTCA-GCCGGCA CAT TGCCGGCATGACC        GGTGCGCTGCATCGG  70 115
APY29_RS22035 4887163 .. 4887178 -  -3.9  -2.87647   AGGGACGACACCATA              GCCGG CCACAC CCGAC               TTGGCGATCTGCTCG  44 205
APY29_RS22025 NONE
APY29_RS22020 4885810 .. 4885849 - -20.1  -3.29829   CATATTCCGCCATAA  CGCACAGGGCCCGCGTCC TTGCG GGA-GCGGGCCCTGTGAG  CGCCAACCGGCAGCG 100 70
APY29_RS22005 NONE
APY29_RS22000 NONE
APY29_RS21995 4880962 .. 4880972 -  -6.8  -4.20516   GCCGCAGCGAACAAA                 CGAC TGT GTCG                 TCGCCAGGCCACGCG  69 237
APY29_RS21990 4879647 .. 4879665 -  -5.2  -3.35679   CGCCCTGACCCAGAA             CCTGATGG GCG CCATCCAG             CAAAGGATGCTGCCG  53 522
APY29_RS21980 NONE
APY29_RS21975 NONE
APY29_RS21970 4876790 .. 4876815 -  -6.8  -2.98545   TTTCCAGAACAAGCA         GCCAGTGCCA GGGTGA TGGCAGCGGC          CAGAACGACGGTACG  51 155
APY29_RS21965 4874586 .. 4874619 - -24.1  -3.16191   TCACATGCGCACGAA     CAAAGACGGGATGGC CATG GCCATCCCGTCTTTG      TTTGCCAATCGCACT 100 74
APY29_RS21955 NONE
APY29_RS21950 4872346 .. 4872383 - -17.7  -3.53012   GGTTGCCGCCCTAAA   CGCGCAAGCGAGCGTGC CGAC GCGTGCTCACTTGCGCG    CGTACAACCCCAGGA  95 15
APY29_RS21925 4866503 .. 4866516 -  -3.8  -3.43151   GGAACGAGGAAGGAA               TGGC GGGCAT GCCA                AGGCAGGCGGCATGG  51 136
APY29_RS21920 4864995 .. 4865014 -   -15  -5.40072   GTGGGCGCAAAAAAA            GGGCTCGG TTTT CCGAGCCC             TCCCCTCCCAGGGTG 100 174
APY29_RS21915 NONE
APY29_RS21910 4861142 .. 4861152 -  -5.4   -3.5485   GACCGAAAAGACCAA                 TCAC ACC GTGA                 TCTTCGCTTTCGAAT  55 15
APY29_RS21900 4859120 .. 4859138 -    -8  -3.14132   CTGTTCCCCGACGAA             GGCCACGG CTT CCGCCGCC             CGGAAAACAGCAAGG  54 451
APY29_RS21875 4851276 .. 4851294 -  -3.8  -2.52464   GGCTCCGGCAAGGTA             GGTGCACA GTA TATGCACA             GTCGGCTGCATCCGG  41 73
APY29_RS21870 NONE
APY29_RS21865 4850174 .. 4850187 -  -4.5  -2.52834   GACTTGATCATCAAT               CAACG GGTG CGCTG                GTTCCGTCCGTCGTG  41 195
APY29_RS21840 4845883 .. 4845901 - -13.8   -3.8698   GAATCCAAACGCAAA             CGCCGCCC GGA AGGCGGCG             CGTGATAACGAAAAG  86 248
APY29_RS21835 4844079 .. 4844112 -    -3  -3.05596   CACGCTCGTACCCAA     TTCGCCCAGGCACGC GCACA GCGTGCC-GCGTGCA     CTGTCATGATCGGCA  43 44
APY29_RS21825 4843293 .. 4843309 -  -5.9  -3.68024   CCTGGCAAGAGAGAA              GTGTTAC TAT ATAACAC              TTACTCGACCGGATG  60 390
APY29_RS21815 4841805 .. 4841835 -  -8.2  -3.53012   GTCGTTGCGCGCAAA       GCATACGCGGAC CGCCAGC GCCCGCGCAGGC       CTCGGCGTCAGCCAC  63 135
APY29_RS21800 4838818 .. 4838838 - -13.3  -3.03124   CCGGACCGCTCAACA            GCGCATCGC CGG GCGATACGC            GTGGGCCGTGCCGCG  71 42
APY29_RS21795 4837567 .. 4837587 -  -7.5  -3.75292   ACGCACCAGCAACAA            CGCCGACTA TCG TCGTCAGCG            ATGTTGAGCGATCAC  65 120
APY29_RS21790 4836828 .. 4836844 -  -5.7  -4.10657   CGATATGTTGCAAAA              CCGAGCG GCA CGCCAGG              AGCTCACCCGGCGCC  67 29
APY29_RS21785 4836249 .. 4836278 - -21.5  -3.01712   CCGCCTGCTGCAACA       CAACGGCCCGACG CATG CGCCGGGCCGTTG        CTGACTCCACCACGT 100 67
APY29_RS21775 4835027 .. 4835042 -  -4.6  -3.58864   GCATCAGCAGAAACA              CGATGC CGAT GCAGCG               GTGTCCAGCGCTGTG  52 322
APY29_RS21765 4833606 .. 4833618 -  -6.2  -3.68962   GTGCAAGACACATAA                CCGC GAGGT GCGG                ACCGATCGCCGCTAG  60 37
APY29_RS21745 4828678 .. 4828714 - -17.3  -3.35046   CGATGCCGTCAAACA    TCTGCATGCCGACACGC GCA ACGCGCCGGCATGCAGG    TCTGCGTCAGCGCTT  91 32
APY29_RS21740 4827881 .. 4827900 -  -4.8  -3.53444   GTATGGTGCGGCAAA            TGTGCGGC AGGC GCCGCGCT             CGCTTCGGGTCAGCG  52 181
APY29_RS21720 4821049 .. 4821071 -  -6.9  -3.05463   ACGCCCTGCACGCAA           CGCGAGCGC GACCA GCGCTTGCA           GACATGCGTCGGCAA  51 196
APY29_RS21675 4812271 .. 4812315 -  -7.3  -2.52464   GGTGTCCGGAAGGGA TGCGCC-GCAGG-CG--GCAGCG ATG CACTGCATCGACCTGCCAGCGCA GCCACGCACCACGGG  50 205
APY29_RS21670 4810817 .. 4810845 - -13.9  -2.78384   CCTCTCGGCATCAGA        CCGGCGCTGCT CGATGGC AGCAGCACCGG        CCATGCGGCGATACC  72 157
APY29_RS21620 4798696 .. 4798753 - -10.6  -2.52543   AGGCGGGGGAAGGCA GGCGGCATTGACGATCTCCCTTCTCCCG CTGG CGGGAGAAGGGAGG-C-TCAGCGCCGGA TGAGGGCTACTCCAC  59 32
APY29_RS21615 4797448 .. 4797464 -  -3.5  -3.30124   GTGGACGCGCCAGAA              CCCGGCC TGC GGCTGCG              CGATGCGCAGGGGTG  47 200
APY29_RS21605 4795290 .. 4795306 - -10.1  -3.59979   CGGGTGGATTGGAAA              CCACACC GTT GGTGCGG              CATTTGTGGGCGCTG  67 339
APY29_RS21590 4793483 .. 4793504 - -15.1  -3.53343   AACGCGCCGCCGAAA           CCGCACGCC GGGT GGCGCGCGG            CGAATCCGGACGGTT  81 455
APY29_RS21580 4791682 .. 4791713 -  -4.3  -3.53563   AGATGTGCCCGGAAA      CCGC-GCAGGCCCA TCGCG CGCGCCTGCAGCTG      ATCGAGCGCCAGCTG  52 177
APY29_RS21570 4790280 .. 4790290 -  -8.2   -2.9356   ATGCACACCGAGATA                 CGCG CAA CGCG                 CCGCCCTGGATGCAG  55 142
APY29_RS21565 4789226 .. 4789245 -  -5.6  -2.57132   GCGCGCCGGCACAAC            CGCTGCGA TGGA TCACTGCG             TCATGCAGAGCGCGC  46 26
APY29_RS21560 NONE
APY29_RS21555 4786962 .. 4786980 - -11.6  -2.52676   CACCGGCGCAAGCCA             GTGCGCGC GGC GCGCGCTC             GGTCAAACCGAGCGT  65 199
APY29_RS21550 4786338 .. 4786358 - -12.6  -2.62933   CAATGCGCGACATCA            CCGACGCA GTGCT TGCGTCGG            TAACTTTTGCCGTGC  67 214
        purU 4785198 .. 4785233 -    -6  -3.65522   CAGCCACGTCAAGAA    TCTACGCCGCAAGC-TC GCC GACGCCGGCGGCGAGGA    CTGGGTCCGTTCGGT  59 249
APY29_RS21530 NONE
APY29_RS21525 NONE
APY29_RS21520 4776750 .. 4776764 -  -4.2  -3.28924   GAGCGGGCTGGATAA               CGCC ACTGGTG GGCG               GGTGATGCAGTCGGT  47 496
        msuE NONE
APY29_RS21490 NONE
APY29_RS21485 4769125 .. 4769159 - -12.1  -2.71011   ATGGCGCCGGAACGA    GTCGGCGCCGGCG-AC GCCG GTGCGCAGCCGCCGAC     GCTCATGTGGCCGAT  66 120
APY29_RS21460 4764098 .. 4764152 -  -8.3  -2.56571   GAGACATGTAAGCCA GGACGCCGCGAGCGCATCTGCAGTCA GCGC CGACAGCCGAGGCGCACGCGG-GAGC GCCGCTGCACCACGT  53 80
APY29_RS21440 4761248 .. 4761263 -    -4  -3.11619   TAACAATTCATTCAA              GCCGAAG TTG CTTCG-C              GGGCCGGCTTAACTC  47 436
APY29_RS21430 4759534 .. 4759546 -  -4.1  -3.95378   TTAGATGCTAAACAA                GATCA CGG CGATC                GCTATGGCAGTTCCC  58 238
APY29_RS21420 4756656 .. 4756679 - -14.6  -3.11619   TAACAATTCATTCAA          GCCGAACCCGC TTC GCGGG-TCGGC          TTAATTCAGGCGTTG  80 420
APY29_RS21410 4755572 .. 4755587 -  -6.1  -3.21099   CCGCGTCACTATCAA              GACGG CTGAGC CCGTC               CAGCGGACCACATAC  51 6
APY29_RS21400 4751695 .. 4751746 -   -28  -3.60098   ATGCCGCAGTGTAAA CCGCCGCCCCGCTAGTCGGCAGCG GCGG CGCTGCCGGCTAGCGGGGCGGAAT GTAGCTGGACAGACG 100 11
APY29_RS21395 4751036 .. 4751051 -  -2.4  -3.61715   CAGCCCGTTCAACAA              GGCCGG CTAC CCCACC               GTGATCGGCGAGGAC  48 389
APY29_RS21380 4748920 .. 4748940 -  -8.2  -3.65827   CAATGTCCAGGGAAA            GCCCGCCA CGACT TGGCGGTC            TGCGGTGTTATCGGC  65 122
APY29_RS21375 4747408 .. 4747426 -  -4.7  -3.28924   GATTGCGTTCCAGAA             TAGTTAT TGATC ATAACTA             CCTTGCCAAGCTGCA  50 227
APY29_RS21370 4746568 .. 4746598 -  -8.8  -3.09234   ACAAACGTCAGGCAA       GCGCGCGCCCCGCG CTA CGCACAGCACGTGC       AGTGGAAACGTTCGT  57 82
APY29_RS21365 4745476 .. 4745496 -  -4.5  -4.11216   TCGCCATCCTCAAAA            GGAGCCAGC CGT GCCGGCGCT            AGAACACATGGACAT  63 24
APY29_RS21360 NONE
APY29_RS21355 4742954 .. 4742985 - -14.4  -3.30007   AATACGTCCCTATAA      GCTCCTTGGCGGCA TGAA TGCCGCCATCGAGC       CTCCATGGATGGATT  82 220
        pobA 4740408 .. 4740418 -  -8.2  -3.05877   GTGAGAAAAACATCA                 CCCC AGT GGGG                 GCCGCCAGCGTACTG  57 270
APY29_RS21340 4739661 .. 4739680 -  -7.1  -3.46068   CTCTCAAGGGAAAGA            GCCTCCGG GAAAG CCGG-GGC            GGTTCAGTGCAGCAG  57 44
APY29_RS21335 4738297 .. 4738318 - -13.7  -2.85351   TGCCCCGATACGACA           GCGCCCACC GTGA GGTAGGCGC            TTATATTGATTGACC  74 124
APY29_RS21300 NONE
APY29_RS21295 NONE
        pcaF NONE
        pcaH NONE
        pcaG NONE
APY29_RS21275 4724209 .. 4724229 -  -3.9  -2.70994   GCAACTGGAGATAAG            CCATCGAAG CAC CGTCAACGG            GAAGAAGATCCAGCC  42 19
        pcaD NONE
        pcaC NONE
APY29_RS21260 4721835 .. 4721849 -  -4.2  -3.28924   CATGCCGGCTCAGAA               CGGC GACGAAA GCCG               CGTGATCCATCGTCC  48 69
APY29_RS21250 4719627 .. 4719655 -  -2.9  -4.08216   GGATTGCCGGGAAAA        CAGGCGACCACAC GTG GATCGGCCGCTTG        GCAACGGTGCAGGTA  58 132
APY29_RS21245 4718317 .. 4718337 -  -9.7  -2.53822   GCGATTCGACAAGAC            CTGCGCGTT GCC AACGAGCAG            CCGATGACAACCATG  56 213
APY29_RS21225 NONE
APY29_RS21220 4712620 .. 4712638 -  -3.1  -2.71712   CTGCCGCTGGGAAAG             CCGCA TCATAGGCC TGCGG             TCACGACCCTTGCAC  40 26
APY29_RS21215 4711985 .. 4712026 -  -5.7  -3.18912   CCACCCACCTAGGAA CGCACT-TGACGCGACCGGC ATC GCCGGTAACGCCTCATCGCG CGCAAGCGTGCTCGT  51 176
APY29_RS21175 4704417 .. 4704444 -  -6.2  -4.03234   GTGCCGTGAGACAAA        GAGCCCGTCTCC TGCG GGAGAGAGGCTG         GGGTGAGGGTGCGGG  65 75
APY29_RS21165 4702943 .. 4702958 -    -6  -2.80443   GGAGACGTCATGACA              CCGGCC TCTC GGCCCG               GGCAGTCGGTGGGTC  46 81
APY29_RS21160 4702714 .. 4702731 -  -9.1  -5.62045   ACAGACAACAAAAAA             CCCCCGA TCTC TCGAGGG              CTTTTGTTCATCCCA 100 62
APY29_RS21155 4702136 .. 4702161 - -13.3  -3.14881   CAACCTTCGTATGAA         CGTGCCTCTAG GTGC CTGGAGGCACG          TTCCGGCGCCGCTGC  73 29
APY29_RS21145 NONE
APY29_RS21140 4697427 .. 4697443 -  -4.3  -3.60098   ATCTTGCAGGGCAAA              GACACGG CGA CCTTGCC              GGCGAGTTCTCTGTC  53 287
APY29_RS21085 4687917 .. 4687940 -    -3  -2.62263   ATCGCTTGGACAGGA          GGAATGAGCG TCAT CGCATACTCC           TATGGGGTCGGGACT  39 49
APY29_RS21080 NONE
APY29_RS21075 NONE
APY29_RS21070 4686145 .. 4686161 -  -2.9  -2.73364   CGTTGACCTCAACCA              GAGACGC ATG ACACCTC              CGGCATCAGGGTAGG  40 2
APY29_RS21065 NONE
APY29_RS21060 NONE
APY29_RS21055 4683616 .. 4683650 -  -4.9  -2.50307   GAAATGGCCAGCAAG    GCATCGGTGGCGTC GTTCATCG GGCGCC-CCGCTGC     GCGGTGCGGTGCGAA  43 7
APY29_RS21050 NONE
APY29_RS21045 4680691 .. 4680715 -  -2.8  -3.52117   GGCACGTATAAAAAC          CAGCATGTGC GAGTG ACACATACAG          ATCCCAGCGCCGCCC  49 210
APY29_RS21035 4678505 .. 4678518 -  -3.7   -3.1886   ACGCAAGCTGAGTAA               GCGTG ACCG CGCGC                CGCGGTGGCCATCGA  47 352
APY29_RS21020 4673256 .. 4673289 -  -7.3  -3.25823   GTGCTGGCACAGCAA     TG-GGTCGTGCCCGAC GCC GCCGGGCGCATCCGCA     TGCCGGTGGGCCTGG  58 247
APY29_RS21010 4670659 .. 4670686 -  -4.8  -3.32294   GGAAAGCCTGCAGAA        GATCGCCAACCGC GTT GCAGCGGGC-ATC        GTCACGGCCGCGCTG  49 277
APY29_RS21000 4667872 .. 4667911 - -12.8  -3.61398   GGCCGCCGGCAAGAA  CCGGGTGATCAACGCCGAT TAG ACCGGCGGCGAAC-CCCGG  TGCGCCCGCGCAATC  77 88
APY29_RS20990 NONE
APY29_RS20985 NONE
        treZ NONE
APY29_RS20975 NONE
        treY NONE
APY29_RS20965 4655399 .. 4655425 - -15.8  -2.79183   GCGATCCGCAGCACA         TGGCCCGGCCCG CAA CAGGCCGGCCCA         TGCACGCTGCCAGAC  78 47
        glgX NONE
APY29_RS20955 4652420 .. 4652443 -  -3.6  -3.14132   CCTGCGCGCGACCAA          GCTCCGTCGG CAAC CCGTCGTCGC           GCACAGGCACGCCCC  44 100
APY29_RS20940 4649377 .. 4649388 -  -2.2  -3.83205   ACGTGGCATAGCAAA                CTCC AGGC AGAG                 AGGGATGCGGCGGCC  54 236
APY29_RS20935 4648598 .. 4648610 -  -4.7  -4.72272   CTGGCCTACGAAAAA                GGCAC GGT GAGCC                TGATCGAAGTGCTCA  79 354
APY29_RS20925 NONE
APY29_RS20920 NONE
APY29_RS20915 4642331 .. 4642383 - -11.2  -3.75657   GTAAAGACGGAACAA GCCACAGTC--CCCGGCGACGACAGC CTG GCCGCCGTCGCCGAGTTGCCTTAGGC GTGCTGTGCAACTGC  76 20
APY29_RS20910 4641351 .. 4641364 -  -3.7  -3.28712   CGTGGCGCTGCAGAA               CAGCC AAAT GGCGG                CATGCGCGCCTGCAC  48 115
APY29_RS20905 4640449 .. 4640472 -  -5.2  -4.46976   AGCAAGAAAGACAAA          CTGCGGGCCGC GGC GCAGGC-GCAG          ACTGGCAAGCCGGGC  71 482
APY29_RS20870 4629243 .. 4629258 - -10.4  -2.73243   ATGTACGCGTCAAAT              TCGCCG GAGT CGGCGA               CCTGATGGCGGTGGG  60 370
APY29_RS20865 NONE
APY29_RS20860 4626976 .. 4627005 - -15.1  -4.21194   TCGCACGATGCAAAA       CAAAACCCCCGCA GCAG TGCGGGGGTTTTT        GTTTGACGCGTTCGC 100 47
        hppD NONE
APY29_RS20845 NONE
APY29_RS20840 4622726 .. 4622780 - -11.3  -2.91452   ATCACCGCAACGACA GCAGCCCGCGCACCGGCAGCACCGAT CGCA ATCACAGC-GCCGACGCGCAGACAGC GCAGCTGCAGCACCG  61 205
APY29_RS20825 4621023 .. 4621038 -    -9  -3.06501   CAGATGGGCATGCAA              TCGCGT CGTG ACGCGA               CTCACCGATCATGCA  60 283
APY29_RS20790 4613617 .. 4613639 -   -12  -2.52464   GTGCTGGCCAAGGCA           TATCGCCAGC TGG GCTGGCGCTA           CTAGAGCGTGTGATG  65 241
APY29_RS20750 4605115 .. 4605125 -  -2.4  -3.86346   CGATGTTTCGACAAA                 TGCG GTG CGCC                 TGACCGCGCCTACAG  54 187
APY29_RS20740 NONE
APY29_RS20735 4602787 .. 4602810 -  -4.5  -3.17194   ATGCTGTGAAGGTAA          TGGC-CGCAG GCTAG CAGCGGGCCA          ATGGGCAGATCGTGA  47 73
        yegS 4601759 .. 4601776 -  -6.9  -3.55801   ATCAAGGGGCGTAAA             GCGAGGC GATT GCCTGGC              TCACCCGAAATGCCT  59 80
APY29_RS20725 NONE
APY29_RS20720 4598671 .. 4598691 -  -2.5  -3.08464   CCAGCATCGAGCGAA            CCGGGAT GGGCAAA ATTCCGG            CGTTCGAGTTGCTTC  41 70
APY29_RS20715 4597964 .. 4597985 -  -3.7  -3.23395   ACGCATCACTATCAA           CGCTGCAAA AAGT TTTTCAGCA            AGGCATGTCCGTGCT  47 0
APY29_RS20710 4597147 .. 4597174 - -12.6  -2.56164   GGCGCAAGCACCAAG        CGGCGCGGCTGC CGTT GCAGCTGCGGCG         ATCATTGGCCCGGAC  67 27
        trpD 4595921 .. 4595942 -  -9.3  -3.03441   CATTATCGGTCAAGA           CGGCCGCAC TGGA GCGCGGCTG            CGCGCCAGCACGCAG  60 106
APY29_RS20700 NONE
APY29_RS20695 4593991 .. 4594013 -    -9  -3.61398   CCGCGTGCTCAAGAA           GTTGCAGGCC GAC GGCCTGCTGC           ACGCACGCGGCAAGA  64 388
APY29_RS20685 4592331 .. 4592358 - -17.8  -6.34424   TGGGCAAAAAAAAAA        GCGACCCAGTGT TTGC ACACTGGGCCGC         CGTCGGCTGTGGAAC 100 97
APY29_RS20680 4591530 .. 4591555 - -11.1  -3.14132   CCTGCGCGTGATGAA         GATCGACGAGG CCCG CCACGCCGATC          AGGCCGAGCAGGCCG  64 448
APY29_RS20670 NONE
APY29_RS20665 4589921 .. 4589953 - -17.7  -4.14243   CACCGGATTCCAAAA      CGACAAGAGCCCGGC ATG GCCGGGCTCTTGAAG      CAGGCATCCCGGCGA 100 66
APY29_RS20650 4588783 .. 4588801 -  -3.7  -2.91695   GCGATCCGGAAAGGA             CCGGCGC TGATT GCACCGC             AAACGAGAATAGGTG  44 54
APY29_RS20645 4588280 .. 4588290 -  -2.4  -3.39895   CGGCGCATGAAGGAA                 CGCG AAT CGTG                 ATCAGTTGCGGGACG  47 275
         bfr 4587567 .. 4587591 -   -10   -2.5333   GGAAGGACAACAGAG          CACCCCCTCC TGCGG GAAAGGGGTG          GGGTGAGGGTACGGG  59 181
APY29_RS20620 NONE
APY29_RS20615 4581099 .. 4581123 - -14.3  -2.54193   CACCACTTCAAGCCA          TGCCGCCGCAT CGG ATGCCGCGGCA          TTCACCGCATGCCGC  74 43
APY29_RS20610 4580175 .. 4580191 -  -3.5  -4.07568   TCGTTGCGCTGAAAA              TCGCTGC AAC GCCGCGC              GCGTCACAGGCTCTT  58 507
APY29_RS20600 4578395 .. 4578439 - -13.6  -3.05715   AATGGCTGCAGTGAA GCGCCATGCAGGTGCGGGCTT CGAG ACGCCCGCACCTGCA-AACCC TTCGGCAGCGTCGAG  75 55
APY29_RS20595 4577228 .. 4577244 -  -5.8  -2.79796   GCCGAGTCTAGCAGA             GCGGACG CGAG CG-CCGC              TGCAACACCGCAAAA  46 52
APY29_RS20590 4575823 .. 4575851 -  -2.9  -3.21199   CATGCAGTAATGGAA        CTGCGTCCACGCC ATT GGCTTGGACTGGG        GGCGGCCACCAGCGT  44 481
APY29_RS20560 4570766 .. 4570776 -  -8.2   -3.0464   AACCGATGTCGAACA                 CGGC GAT GCCG                 CGCAATCGCCACTTT  57 77
APY29_RS20530 4563218 .. 4563233 -  -8.2  -2.70275   GAATCGCAGAGATCA              CCGCAC AGCA GCGCGG               CCAGCGGCGTTGCTG  54 54
APY29_RS20525 4561372 .. 4561422 -  -2.9   -3.1506   AAACGGCCCCAGCAA CGCCAGCCACAGCGCGGCACGACC GACT GGGCGCGCAGCGCGGCT-CATGCG TCGACCCGCTGCGCC  44 19
APY29_RS20520 NONE
APY29_RS20515 NONE
APY29_RS20510 NONE
APY29_RS20505 NONE
APY29_RS20500 4556850 .. 4556875 -    -4  -3.09878   CTGATGCATCGAAGA         CTGC-TGCAGC TGGCC GCTGTACGCAG         ACAGGCTCATGCGCG  45 32
APY29_RS20495 4555630 .. 4555642 - -10.5  -2.93991   GCGAAGGCAATCAGA                GCCGC GCT GCGGC                GATGCTGGGCATTCA  59 294
APY29_RS20480 4554096 .. 4554144 - -15.2  -3.01712   TTGCCGCCGGCAACA CCGCCGCCGGTGG-ACGCGCAGC AGGC GCTGCGCGTGCCATCGCCTGCCG CCGCGGTGGCTGCGT  81 254
APY29_RS20470 4552094 .. 4552120 -  -5.1  -3.76224   CGGGCACCCATCAAA        CCA-CC-GCGCTG TGC CTGCGCTGGCTGG        ACAGCCTGGCCGGCA  60 485
APY29_RS20460 4550898 .. 4550917 -  -7.1  -3.46068   CTCTCAAGGGAAAGA            GCCTCCGG GAAAG CCGG-GGC            GGTTCATGCTGTGCT  57 60
APY29_RS20455 NONE
APY29_RS20450 4549363 .. 4549390 -  -2.6  -3.21099   GGCGGGCACGAGCAA        GCGGCATGGATGG CGG CGACCC-TGCTGC        GGAACCACCCGCAGC  43 54
APY29_RS20445 NONE
APY29_RS20440 4547865 .. 4547882 -  -8.3  -4.56607   CGATGAAGCAGAAAA             GGCCCGG GAAA CCGGGCT              TTTTTGTTGCGTTAT  86 218
APY29_RS20405 4540017 .. 4540040 -  -8.8  -2.62263   AGTTGCGCGACAGCA          GCCTC-GCGCC CCA GGCGCCGAGCC          CCCTCTTGCCGCTCG  52 226
APY29_RS20395 4539110 .. 4539122 -  -3.3  -4.26188   TTCAGACATCGAAAA                GCCGA CGA CCAGC                GCTCTTTGCCTTCGA  64 100
APY29_RS20385 4538187 .. 4538199 -  -3.4  -3.06501   GAGACCTCGATTGAA                TGGA TGAGG TCCA                TTCTCCGGATGCGCG  43 250
APY29_RS20380 4537211 .. 4537254 -  -8.1  -2.52676   CAGTTGCTGAACTGA GGACGATCAC-CGGCGCTCCG ATCG CGGCGCGCCGGGTG-TCTTGC GAGCCACTGCCAGCC  53 110
APY29_RS20370 4535100 .. 4535113 -  -5.2  -5.00884   AGCGCGCGGAAAAAA               CCCG ACAAAG CGGG                TGCGGGCCAGAGATT  83 115
APY29_RS20365 NONE
        groL 4532882 .. 4532899 - -14.1  -5.61596   ACGCGCATAAAAAAA             CCCCGCC GTTG GGCGGGG              TTTTTTTACTGCAAC 100 58
APY29_RS20350 4526942 .. 4526964 -   -12   -5.4505   GGCGGCAACAAAAAA           GCCGCCAG GTGTGCG CTGGCGGC           TTTTCGGGAATGCTG 100 472
APY29_RS20345 4525349 .. 4525403 -  -3.9  -3.64703   TGTCGCTGAGCGAAA CGGGCCATCACTGGGTGGTGTCC AATCCGTCG GGCCGGCTCCCTGCGCCGGCCCG ACGTTCTTGGTCTGC  53 432
APY29_RS20340 4522754 .. 4522798 -   -10  -4.08216   GCAGGCTCCTGAAAA CCGCGCACG-C-GGCTGGGCAC AGT GTGCCAAGCCAGTCGTGAGCAA GGCGCAGCACGATCA  78 55
APY29_RS20335 4520129 .. 4520156 -   -17  -5.28176   GCCAGGCATAAAAAA        GCCCGCTTGCAG CGAA CTGCCAGCGGGC         TTTGCTCCCTCCCCC 100 162
APY29_RS20320 4515395 .. 4515409 -  -5.6  -3.29471   CCGCCAGGACAGCAA               GGCACC GTT GCTGCC               GTTCGCTGCAGCTGC  52 69
APY29_RS20310 4514512 .. 4514522 -  -6.8  -2.93723   CTGCCATCAATCAGA                 CGAC GGG GTCG                 GGAGCCGGGACGATA  50 10
APY29_RS20305 4512142 .. 4512157 - -11.8  -3.09516   GCTGGCATGACCCAA              GGCCCG TCAG CGGGCC               ACTGATACTCAGGAC  68 230
APY29_RS20295 4510256 .. 4510272 - -10.1  -2.94747   CCATGGGATGAGAGA              CGCGTCG GAA CAACGCG              GGTGGGACAGATGCA  61 218
APY29_RS20290 4509447 .. 4509464 - -14.1  -3.66178   CCCCTCAACGGCAAA             GGCCCGC CGAA GCGGGCC              TTTGCCTGGACAGCA  81 51
APY29_RS20285 4509019 .. 4509037 - -11.6  -3.07816   GGTGCATTGATGGAA             CGCGCGCC AAG GGTGCGCG             TGCCGCGAGGCCGGA  68 110
APY29_RS20280 4507620 .. 4507631 -  -5.8  -3.53012   CGCGTCGGCTCTAAA                CGCA TCGC TGCG                 CCGCGTCTCCCGCAC  55 60
        mdcA NONE
        mdcC 4503809 .. 4503819 -  -2.4  -2.54459   AACATTACCAGGAAT                 GCCC GTC GCGC                 CCTGGTGCGCTCCTA  38 59
APY29_RS20255 NONE
        mdcE NONE
        mdcG NONE
        mdcB 4500561 .. 4500581 -  -8.1  -4.25104   CGGCTGCGAGCAAAA            CGCCGCGGC ATT GCCGCTTCG            CAGGCACCACCTGTT  79 65
        mdcH 4499418 .. 4499436 -  -8.1  -2.53449   ATACGCGTACAACAC             GGATGGC CGCCC GCCACCC             TGGGGTCACACCGTG  53 60
APY29_RS20230 4498033 .. 4498043 -  -4.6  -2.79796   GCGGACCGCATCACA                 GCCA GCC CGGC                 ACCACGAAGACCAGC  44 10
APY29_RS20225 4496856 .. 4496871 -  -6.8  -2.70932   TCTGCTGGGCAAGCA              GCG-CGC CTT GCGTCGC              GTGTTGCGCAGCACC  48 384
APY29_RS20200 NONE
APY29_RS20195 4491121 .. 4491138 - -14.1  -4.77896   GAATGAACGCAAAAA             CGCCGGG CAGG CCCGGCG              TCTTGATGCAACGTT 100 137
APY29_RS20190 4489837 .. 4489847 -  -6.8  -3.29144   GCATGCTGGTCAGAA                 CGCT TGC AGCG                 CTTCGGTCAGTTGGC  55 9
        aceE 4486555 .. 4486581 -   -21  -3.95219   GGGAAATCTCATAAA         GTAATGGCGGCC ATC GGCCGCCATTAC         AGAATTAATCAATAC 100 53
APY29_RS20180 4485744 .. 4485775 -  -5.1  -2.85351   TGGCTTCAGATGACA      GCAGCATCCACAC AGCGCG GCGCAGATCCTGC       GACTGATGGCTGAGG  46 57
APY29_RS20175 NONE
APY29_RS20170 4483671 .. 4483683 -  -3.3  -3.53811   TCCAGGCGTCTGAAA                GCCGA CGC TCGCC                GATAGCGAGTCCATC  51 334
APY29_RS20160 NONE
APY29_RS20155 NONE
APY29_RS20150 4480044 .. 4480054 -  -3.2  -2.60511   TACCGATAAAGAGAC                 GAAG CAA CCTC                 ATATTTACCGGATGC  39 466
APY29_RS20140 4477190 .. 4477213 -  -2.3  -3.85698   TTCGGTCGCCAGAAA          TCGCCGCAG GGAGGG CTGCGGGCA           GCCCCACTTCACATC  54 143
APY29_RS20125 NONE
APY29_RS20120 4474071 .. 4474090 -  -9.2  -3.21218   ACCCTTCATCATCAA            TGCGCGGC TCAA GCCGCTCA             TGCTGCGCACGCCCG  59 488
APY29_RS20110 NONE
APY29_RS20105 4470589 .. 4470607 -  -2.2  -2.78384   CGGGTGCGCAGCATA             CGCCACTG CAC CCGCCGCG             CCATATCGACCATGC  39 44
APY29_RS20100 4469648 .. 4469670 -  -6.2  -3.28712   GCTGCCTGCCGACAA           TGGCGCGC CTGTATT GCTCGCCA           ATCCGCTGGCATCGG  53 512
APY29_RS20080 NONE
APY29_RS20075 4466756 .. 4466785 -   -18  -2.78463   AGCTGCCGGATCACA       CGTGTCATCCGG CCAGAC CCGGATGACACG        GTGGCACTCACTTGG  86 33
APY29_RS20055 4462381 .. 4462428 -  -5.4  -3.21747   CCACCGGACCACGAA CATGCTCATCGCATCATCACGTC GAC GACGGGCCGCAGCG-TGCGCATG CCAAGCTGATGCCAT  48 123
APY29_RS20050 NONE
APY29_RS20045 4460210 .. 4460252 -  -7.5  -2.79302   ATCACCGCGATGACA GCGACGCCGCGCACCAG-CC AGTC GGTCAGGCGTGCGGCCTTGC GTTCGGAGGCCGGCA  52 115
APY29_RS20040 4459950 .. 4459973 -  -6.6  -4.11692   CATGCAGTGCGAAAA          CGTGCGATCG CGAC CGGTCGCACC           ATCACCGCAGCTGAC  69 27
APY29_RS20025 4456962 .. 4456986 -  -5.6  -4.19238   TCGGGAACGGCAAAA          GCGCTACTCC GATCG GGTTTAGCGC          ACTTCTGCTTTTGCC  67 66
APY29_RS20015 4455277 .. 4455321 -  -4.2  -3.91164   AAGCCGTCAAAAATA CGAGATCGCGCCAGCGCATACC AGG GGTTTGCGCTG-CGGTAGC-CG CGAGGCCATGCATGC  58 345
APY29_RS20010 4453802 .. 4453840 - -16.6  -2.64616   CGCGCATCGACATGA   CCGCCCGCAGCGTGCGTC ACT GCCGCACGCTGCGCACGC   AATGAGTTCCGCACG  80 47
APY29_RS20000 4451272 .. 4451285 -  -3.7  -3.72324   CAGCCCTATGAAGAA               GCCAG CTTC CAGGC                CAAGGGCTGATCCGG  56 373
APY29_RS19980 4446377 .. 4446395 -  -8.8  -4.12188   CCAGCACCGCGAAAA             CGTCGCAC CTC GCGCAACG             CCCAACCCCGCCGTG  72 231
APY29_RS19970 NONE
APY29_RS19965 NONE
APY29_RS19955 4444446 .. 4444460 -  -5.6  -3.72027   ATCGCCCAGCAACAA               CATGCC TTG GGCCTG               ACCGTCTTGTTGGGC  57 308
APY29_RS19940 4436858 .. 4436909 - -28.2  -2.57132   GGCTGCGTGCATAAG CAATGTCGCCTCCCGCACACGAGC GCTC GCTCCTGTGCGGGAGGCGATATCG GTCGCATGTGCAGCG 100 504
APY29_RS19925 4431148 .. 4431173 -  -9.7  -3.51924   GGCGCATCGAGACAA         GGCGCG-CAACG CGG CATCGGCGCGCC         ACAGGACGCTTCCCG  65 120
APY29_RS19920 4429577 .. 4429596 -  -7.8  -3.38522   CATCCACGGCAAATA            GCTCTGGA TTGT TCCAGCGC             CTTGCTGCCGCCTAG  58 305
APY29_RS19915 4427712 .. 4427738 -  -9.5  -4.18762   AAGGCTGATTCAAAA         GCGGCATGT CGATATGGC ACATGCCGC         ATCGCGCAAGAGCAG  79 78
APY29_RS19900 4424606 .. 4424628 - -10.5  -3.04322   TGCAACCCTGCAACA           GCGCCGGCC AGCGA GACCAGCGC           CGATGCGCACTCCTC  62 39
APY29_RS19895 NONE
APY29_RS19890 NONE
APY29_RS19885 NONE
APY29_RS19880 4420661 .. 4420677 -    -5  -3.93026   AAGACCGTAACGAAA              CCGGCC TGATC GGCCGC              GGTCTGTTCGACCTG  61 393
APY29_RS19870 NONE
APY29_RS19865 4418415 .. 4418441 -  -2.8   -3.9534   ATCTATACCGACAAA         CTCAAGCGGGTG CCG CAGCTGCGCGAG         CAGGTGGACCGCCTG  58 177
APY29_RS19855 4417199 .. 4417242 -    -3  -2.52795   AATGCCCGGAACGTA GCACAGCGC-CCCGTCGGC CAACCCT GCCGAAGGTCAGGCTGCGC GCGCCTGTGTCGCCG  39 15
APY29_RS19850 NONE
APY29_RS19845 4414273 .. 4414294 -  -4.3  -3.70902   TTGCCTACACGCAAA           GCCTGCCGC GCCT GGAACAGGC            GGTAGAGCGAATTGC  55 151
APY29_RS19835 4410731 .. 4410767 -  -7.3  -3.06671   ACACGCAGCCCAATA   TGCAGCGACGCCGGAC TGCGCT ACCCGGC-TCGCTTCA    GGGCGAGGCGGCGAA  54 187
APY29_RS19830 4410125 .. 4410143 -  -7.4  -2.90194   ATGGGCCGAAGTATA             GCCAGAAC ACC GTTATGGC             CGTGCGCTCGGTGGC  53 50
APY29_RS19825 NONE
APY29_RS19820 NONE
APY29_RS19815 4408216 .. 4408233 -  -8.3  -3.04144   CCGTCATCTGCAACA             TGCGCGC GAAC GCGCGCC              CTGCAGGTGCAGACA  57 143
        xerC 4407081 .. 4407097 -  -3.5  -3.61398   GGGGGTTTCCAAGAA              GGTGGGG ACG CCCCTGC              CGGGTTCAAGCACGC  51 181
APY29_RS19805 4406471 .. 4406482 -  -3.6    -3.737   GAAGTGGGGACGAAA                CCGC TGTT GCGA                 TTCCCGATTCCCCAC  54 48
APY29_RS19800 4404972 .. 4404990 -   -16  -5.27335   TGCTGCAAACAAAAA             GACCCGCC ATT GGCGGGTC             TGTTCCATCCCACGC 100 62
APY29_RS19775 NONE
APY29_RS19770 NONE
APY29_RS19765 NONE
APY29_RS19760 4396059 .. 4396075 -  -5.7  -3.19463   TGCACTATCGATCAA              GCGCGGC AAT GCTGCAC              CAACTCGCAAACAGA  51 73
APY29_RS19750 4394735 .. 4394760 -  -6.7  -3.75933   AGAGACCTGAGCAAA         CGGCATGCCAG CACA CTGGTGCGCCG          CACCACGTCGAGTCA  62 421
APY29_RS19745 NONE
APY29_RS19740 NONE
APY29_RS19735 NONE
APY29_RS19730 NONE
APY29_RS19725 NONE
APY29_RS19720 4385564 .. 4385574 -  -4.6  -3.64822   ATTCCCGTAGTCAAA                 GCGC CCA ACGC                 AACCCAATCAAATAC  55 10
APY29_RS19705 4380838 .. 4380864 -  -5.1   -3.1855   GTCGGGAATAGGGAA        TCG-GGGAGCAG GTGG CTGCCCACGCGA         CGGGTAAGGCGAGAA  48 142
APY29_RS19700 NONE
        mreD NONE
        mrdA NONE
APY29_RS19685 4375622 .. 4375636 -  -9.2  -3.33696   CGCCGTGCCAACGAA               GCGGCA CCG CGCCGC               TGTGTCGTCATTGCA  63 186
APY29_RS19680 4373878 .. 4373893 -  -6.2  -4.58773   GCCATGAAACGAAAA              GACTTT AGTC AAAGTC               AAGCCTGCTGCGTGT  76 221
        mltB NONE
APY29_RS19670 4370902 .. 4370920 -  -3.7  -3.12668   TGCGAAATTGTAAGA             CGCCACG GCGAT CAGGGCG             ACGCGTTGCACGATG  47 371
APY29_RS19660 4369620 .. 4369637 - -12.7  -5.44119   CCGATTCCAAAAAAA             TGCCGGC TTTC GCCGGCA              TTTTCTTTACTCCGA 100 32
APY29_RS19650 NONE
APY29_RS19645 NONE
        lipA 4366009 .. 4366045 - -25.9  -2.87931   CGCACGGGCCAGAGA    CGGCGACAGCCCCGCGC GAT GCACGGGGCTGTCGTCG    ATTGGCATTGCGATG 100 191
APY29_RS19635 4363603 .. 4363623 -   -14   -4.4261   TTGCCAACATGAAAA            CGCCACCG GCAAG CGGTGGCG            TCCATGCAGTCGATC 100 52
APY29_RS19625 4361760 .. 4361772 -  -6.2  -3.04461   CACGGACGTGCAAGA                GCCG TTGGC CGGC                AGCCAGGCGCGGGCC  49 82
APY29_RS19615 4359544 .. 4359562 - -13.1  -3.33696   TTCGCGTCGAATGAA             CCGGCGG TCTGT CCGCCGG             CGGGAGGTCACGGTT  74 103
APY29_RS19610 4358083 .. 4358106 -  -4.5  -3.05463   ATGTCGTCGATGGAA          GCGTGCATGG CGAGT CC-TGCGCGC          TGCGCGTCAGCGACG  45 32
APY29_RS19605 4356989 .. 4357004 -  -3.2  -3.05463   ACTGCGCTGATCGAA              CTCATC CATC GATGGG               TTCCCACAAAACATC  43 11
APY29_RS19600 NONE
APY29_RS19595 4355074 .. 4355094 -  -5.4  -3.06261   CGCGAAGCGTGAACA           CGCCATCAC GGCT GCG-TGGCG            GGCTCGGTTTGCGGC  47 10
APY29_RS19590 4354518 .. 4354536 - -17.4  -4.02132   TCTCAAACGTAGAAA             GCCCCGGC ATG GCCGGGGC             TCGCAGGATTCAATT 100 63
APY29_RS19585 NONE
         gnd 4352061 .. 4352086 - -17.6  -3.04144   TCTGTACTTCCAACA         GTGCGCGCCG CGATCC CGGCGCGCAC          AGCCATCGCATCCCA  88 45
APY29_RS19570 4350378 .. 4350399 - -15.9  -4.98531   CTTCGAAACGAAAAA           GGCGCACTC CGTG GAGTGCGCC            TGGTGCTCGGGTCGC 100 80
APY29_RS19565 NONE
APY29_RS19560 NONE
APY29_RS19555 NONE
        folK 4345481 .. 4345492 -  -3.6  -3.61398   CTGTGGCCGGAAGAA                GGCA AATC CGCC                 GACGCCAAGCATGCG  51 344
APY29_RS19540 NONE
APY29_RS19535 4342992 .. 4343005 -  -3.8  -3.44146   CGGGCTGAGAATGAA               GCTG TAACGG CAGC                GGCAGCGGTGGCGAG  51 266
APY29_RS19525 4340271 .. 4340285 - -12.8  -3.09933   TGCCAACGTATCGAA               GCGCGC ATC GCGCGC               CTGTTCGACTGGCCA  69 362
APY29_RS19515 4338063 .. 4338121 - -17.5   -4.1891   CCCTGGCAACAGAAA GATGAAGCTGGACGCATCGCACGGCGACC GAT GGCCGCCGTGCGATGC--CATGCCTCAGC AGGGACGGTCGGCGG 100 21
APY29_RS19510 4335320 .. 4335358 - -17.4  -4.50976   CGCCACACGACAAAA   TGCGAACGCCCGCCATGC AAT GCACAGCGGGCGTTTGCG   GCACCTGGCACCTGC 100 49
APY29_RS19505 4334399 .. 4334409 -  -5.4  -3.02829   CAGAGCGGGCGAACA                 GCAA TCA TTGC                 GGGCGCTTCAAGGTC  47 19
        gspD NONE
        gspE 4330842 .. 4330854 -  -4.8  -2.94032   ACGGTGTAATCAAAC                TGCG GCATG CGCA                TCGTCCTGTTGGCGG  46 7
        gspF 4329632 .. 4329651 -  -4.2   -3.5393   ATGACGGTCTCCAAA            GATAAGCG GCTG CGCTCAAC             CAAGCGCGAGGGTGT  53 21
        gspG NONE
        gspH NONE
        gspI NONE
        gspJ NONE
APY29_RS19465 4326690 .. 4326700 -  -2.4  -3.30124   GGTCATTGGTCAGAA                 CTCC ATT GGCG                 CGCGACCAGTCGGAT  45 2
        gspL NONE
APY29_RS19455 NONE
APY29_RS19450 4324367 .. 4324393 -  -6.4  -3.30441   GATCATGGTGCAGAA         GACGGGCGCTGT GGC ACGTCGCCAGTC         ATAGCGTTTCTAGTG  55 35
APY29_RS19445 4320847 .. 4320864 -  -3.4  -2.56596   CCGGCTAGGAACTCA             CGCCTGC GCATG GCAG-CG             CCTGGTCAACTGCAG  39 136
APY29_RS19440 4317911 .. 4317926 -    -6  -3.04792   GCACCACGGCGAACA              GGCGCG CAGG CGCGCA               GGCGCGCAGGCGACG  49 62
APY29_RS19435 NONE
APY29_RS19430 4314121 .. 4314153 - -10.6  -3.10409   TACCAATTTACGCAA     CGCGCATC-AGGCCG CGGC CGACCTCGACGCACG      CAATCGCGTGAATTG  62 145
APY29_RS19425 4313284 .. 4313301 -  -6.9  -2.60075   GTTGTCGTAAGGAAT             GCCGTTG GCGT CAGCGGC              GCAGTTCGGCGACGA  48 18
APY29_RS19420 NONE
APY29_RS19415 NONE
APY29_RS19410 NONE
        nagA 4308490 .. 4308533 - -23.2  -3.84514   ATTTCAAGGATCAAA CGCAACGCGCGCGCCGCATC ACGC AATGCGGCGCGCACGATACG TTGGCCGGCCAAGAA 100 165
APY29_RS19400 4305044 .. 4305066 - -10.5  -4.08706   CCGCCACGAGATAAA           GCCGGCTGC ACAAA GCAGCCGCC           CTGGCCGGGCATTAC  78 37
APY29_RS19350 4293725 .. 4293745 - -15.4  -3.28924   GATGCGCTGCGACAA            CCGGCGCG CAGAC CGCGCCGG            CACGAGGATCGACCC  84 199
APY29_RS19330 4290078 .. 4290100 -  -6.9  -3.04144   TCGCCAGCGCCAACA           CGCGCTGGC AACCG GCCAAGGCG           CGCTCAGTAAGCGAA  51 29
APY29_RS19315 4286120 .. 4286146 -    -5  -3.92602   GCAACACCGCAGAAA         TTCGCACAACCT GCC AGGTTGAGCGCT         GCGAGTATTGCAGTG  60 322
APY29_RS19310 4285315 .. 4285326 -  -2.2  -5.00884   ATTGTTTCGAAAAAA                GCTA TGCC CAGC                 GGCCTGCTGACGGTC  77 290
APY29_RS19305 NONE
APY29_RS19300 NONE
         gfa 4283132 .. 4283159 -   -17  -4.70583   CTTACGAAGAGAAAA        CCCTGCAGCCGG ATCG CCGGTTGCAGGG         TTGGACCATCAATGC 100 34
        fghA 4282230 .. 4282248 -  -4.4  -3.05384   GTCTGTGTCATGCAA             CTCCCAGC TGC GCTGCGCG             TCTTTAGGTCATGCA  45 56
APY29_RS19285 4281460 .. 4281472 -  -4.7  -3.63073   CACACTGGCCAACAA                CGGGC AAC GCCTG                CGCGATGCGATCGTG  55 490
APY29_RS19275 4279406 .. 4279439 -  -8.1  -3.14132   CTGCGCCGGTAGCAA     CGGCGACGGCCGCGCT CAC AACGCGATCGTC-CCA     TGCAGGTACTGCACC  58 7
APY29_RS19270 NONE
APY29_RS19255 4275485 .. 4275504 - -11.4   -4.0162   TGCGCACATGACAAA            GGCGCACC CGGA GATGCGCC             TTTGTGCGATGACTG  82 88
        glyA 4274057 .. 4274067 -  -3.2  -2.78715   AATCGGGCCAGCAGA                 GCTA TCG CAGC                 GTCGCTTTTACCATT  40 74
APY29_RS19245 4273466 .. 4273490 -  -6.3  -2.52464   CGTTTGCGCAACGCA          GGCGATGCGCA TCG CGCTCATCGCT          TGCCGGGTTTGCCGG  48 18
APY29_RS19240 NONE
        ribD 4271823 .. 4271840 - -14.1  -5.52384   CGCGCATGAAAAAAA             GGCCCCG CATG CGGGGCC              TTTTTTATGCGCGTA 100 80
APY29_RS19230 4270193 .. 4270203 -  -3.2  -3.62046   TGAGCGCGCCAACAA                 GGAT TAC ACCC                 TCGGTGGCGGCTTTG  49 438
APY29_RS19220 NONE
        ribB 4267619 .. 4267639 -  -5.3  -3.20723   CCGTCAGCAACGCAA            CAGTCGAGA CCA CCGCGACCG            GCCAAGTGATTGCGG  48 59
APY29_RS19210 NONE
APY29_RS19205 NONE
        thiL 4264930 .. 4264950 - -11.8  -3.64703   TGTCTCCCACGCAAA            GCCGGGCC GGGAT GGCCCAGC            GGCAACTGCGATGCA  75 384
APY29_RS19190 4263201 .. 4263224 - -13.2  -3.87815   GCGCACTGTCAGAAA          TCGCGTTCGC CTGA ACGAACGCGA           CGTGACAGGTGCAGA  83 129
APY29_RS19185 4261384 .. 4261409 - -15.5  -3.66803   TGCCAACATGGCAAA         GCGCTGC-CGCA CCG TGCGCGCAGCGC         CGATGGAGCAGACAG  86 362
APY29_RS19180 NONE
APY29_RS19175 NONE
        kdpB 4257290 .. 4257306 -  -2.2  -3.49048   CGGCAAGGAAGAAGA              CATGGA CATGT TCCAGG              AAGAAGAAAGGGGCA  47 52
APY29_RS19165 NONE
APY29_RS19160 NONE
APY29_RS19155 NONE
APY29_RS19150 NONE
APY29_RS19145 4251869 .. 4251881 -  -3.3  -3.26097   AACAAGAACAGTTAA                CTCAG CAG CAGAG                AATGCAACCAAACAC  46 189
APY29_RS19140 4251210 .. 4251225 -  -4.6  -3.65522   CAGGGATGCCAACAA              CCCGGC CTTG GCCAGA               GGATTCAACAGCGAA  55 413
        rsmI 4244760 .. 4244778 -    -3  -2.79098   GGTACCGATCAACCA             CCGTCGCT TCC AGCCACGT             TCCTGCGATGACCGC  40 42
        rnpB 4244220 .. 4244234 -    -7     -3.94   CGAACGCCCAAAGAA               GGCGGC GGA GCCGGC               CGATAAGCCGGGTTC  65 13
APY29_RS19085 NONE
APY29_RS19080 4240770 .. 4240783 -  -3.7  -3.23692   CACGACGAGCAGCAA               GCGGC TCAT GCGGC                GTCACCGTTCGCTGA  47 17
        ftsL 4240498 .. 4240510 -  -4.7  -3.53012   GCTGCGCCGTGCAAA                GCGGC TGT GCTGC                TTTGTCATGGGCGCA  53 30
APY29_RS19070 4238571 .. 4238611 -  -5.4  -3.14344   CACGTCCGGCAGCAA CTGCGAGAG-CGCCATGGAG AGG CTCACTGGCGGCTCTC-CTG CAACGGCGCGGGCTG  48 8
APY29_RS19065 NONE
APY29_RS19060 4235606 .. 4235621 -    -4  -3.17571   AACGGGCCAACTCAA              GCAGCAT GGG ATGC-GC              CCTCCGCCGATGCGA  47 6
APY29_RS19055 NONE
        ftsW NONE
        murG NONE
APY29_RS19040 NONE
APY29_RS19035 4229423 .. 4229472 -  -6.6  -3.03124   TGGGAGTCGGGAATA GGGAATC-GCAAC-GGCAACAGCG CATC CGCTGTTACCCATTCCCGATTCAC GATTCACGATTCCCG  51 44
APY29_RS19030 NONE
        ftsA 4227154 .. 4227179 -  -3.1  -3.60971   ATGGGAAGTTGGAAA         TGGGGAATCGC AACA GCGAATCACCT          CCACGCCAACCACTG  51 162
APY29_RS19020 4225675 .. 4225702 - -15.6  -4.14243   CACGCGATGGCAAAA        GCTGCCGGATCG GCAC CGATCCGGCAGA         AATGACATGACATGG 100 109
APY29_RS19015 4224399 .. 4224419 -  -2.3  -3.92373   GAGGCGACGCACAAA            GGCTTGCGC GAC GCGCTGGCT            TCTCTGCAGGACGTG  56 244
APY29_RS19005 4222979 .. 4222997 -   -16  -4.05788   CCGCCGTAAACGAAA             CAGGGCGC ACT GCGCCCTG             TCGATGGCAACACCC 100 92
APY29_RS19000 4220043 .. 4220062 -  -9.2  -4.06055   AGTTCCGAAAGCAAA            GCCCCCTT GGTA AGGGGGGC             GCGCCGAAGGCGTGG  76 132
APY29_RS18995 4218706 .. 4218730 -  -3.3  -3.65812   GCGGCTGGAACAGAA          CCTCGCCAGTG GCA CGCCGGCGCGC          AGCGTGCTGCGGCTA  53 189
APY29_RS18975 4215167 .. 4215183 -  -4.3  -3.73224   GTATCGCTCATGAAA              GCGCTCC ATG GAAGTGC              GCCCAGTGTAGGCGT  56 233
APY29_RS18970 NONE
APY29_RS18965 4211662 .. 4211706 - -19.2  -3.48276   GGCGCGTCGAGACAA GGCGTGCGCCTTGCCCGGGC TGGCC GCCTGGGCAAGGCGCGCAAC GCGGTCTCGGCGCGC 100 505
APY29_RS18950 4209843 .. 4209878 - -16.1  -2.53715   TGCACCACGATCAAG    GCCAGGCCCCGACGC GAACCG GCGTCGGGGCTTGGT     TGTTTCTACGGGCTC  79 284
APY29_RS18940 NONE
APY29_RS18935 4206885 .. 4206903 -  -6.6  -3.85698   CTGTGCGGCGACAAA             GAGCGCCA GGG TAGCGCGC             AGGCGTCCGCACGAC  65 224
APY29_RS18930 4206252 .. 4206264 - -10.5  -2.90392   GATGTGGCAACTACA                CGCGC CAT GCGCG                ATTTAAGTGGCGGAC  61 66
APY29_RS18925 4205338 .. 4205359 -  -2.2  -3.89614   TGGAAGTTTCAGAAA           TGGCGAAC TCTGAC ATTCGCCT            TATTCAGGCTAGCAA  54 134
APY29_RS18920 NONE
APY29_RS18915 4203033 .. 4203052 - -16.4  -3.36581   GAAAGTGTCAATCAA            CGGGCGCC GCAA GGCGCCCG             TTGTGCTTCAAGGCC  88 202
APY29_RS18905 4198499 .. 4198516 -  -6.3  -3.03635   CAAAGTCGTCGAAGA             CTAACCC AAAA GGATTAG              ATGATCGCGACGCGC  51 253
APY29_RS18900 NONE
APY29_RS18895 NONE
APY29_RS18890 NONE
APY29_RS18885 NONE
APY29_RS18880 4191294 .. 4191335 - -13.7  -2.50994   TCCAATCCGATGAAT GCAGCAGCGC-GCCATGG ACATGCA CCAAGGCTGCGCCGCCGC GAATGTGAGGAAGCG  71 451
APY29_RS18870 NONE
APY29_RS18865 NONE
APY29_RS18855 4183551 .. 4183561 -  -3.2  -3.28912   GCACACGCAGATCAA                 GACG CTG CATC                 TGGACAACCGCGAAC  46 225
APY29_RS18820 4174441 .. 4174458 -  -2.7  -3.57462   GACCTGATGTTTAAA             TCGAACT CTGA ATTTCGA              TTCATCACGCCAATC  49 119
APY29_RS18815 4173930 .. 4173941 -  -7.2  -3.29511   CGCATTGCGGCATAA                GCCG CGCG CGGC                 AGGGAGGATAGAGTT  58 234
APY29_RS18810 4171623 .. 4171661 -  -4.3  -2.59564   CGTGCATGCGACAAC   GGCGGCAGCGGGCGGGC GATGG GCATGGCCGCTACCAGC   TCACCGCCAGGCTGA  41 18
APY29_RS18805 4170978 .. 4170994 -  -2.2  -2.77501   ATACAACGGGGAAAC              GTTCGG CTCAT CGGAAC              TCTCGGGAGTGGTTG  39 47
APY29_RS18800 4169940 .. 4169950 -  -4.6   -4.3255   TGTTCAAGGAATAAA                 GGCA AAG CGCC                 GTCTCGCTCGTAGGA  68 140
APY29_RS18760 4161619 .. 4161629 -  -4.6  -2.60615   AGCTTTGTGAAACAT                 GCCG GAT CGAC                 GGTGGAAAGAGCGTG  43 73
APY29_RS18755 4160875 .. 4160896 -  -5.8  -2.66316   GCGCGCAGGACATCA           CGCCATCG GTTGGG CGATGTCG            GCGATGCGATAGCCG  46 1
APY29_RS18750 4159033 .. 4159080 -  -7.9  -3.39749   GGAACAACGCTAGAA CGCA-ACCGAGCCAATCCGGCG CGCCTGT CGCCGGATCG-C-CGGTCTGCA GGCGAGACGTTGGCT  60 400
APY29_RS18740 NONE
APY29_RS18735 4156856 .. 4156878 -  -5.4  -3.05384   CGTCCCCTCACCCAA           CCTCTCCCCC GAC GGCAGAGCGG           CTAGCTCTCGCCGCA  47 179
APY29_RS18730 NONE
APY29_RS18725 4155258 .. 4155268 -  -2.4  -2.72799   CGTGCAGATAGATCA                 TGCG GAC CGCG                 TATCACGTAGAGCGA  39 69
APY29_RS18720 NONE
APY29_RS18715 4153553 .. 4153566 -  -5.2  -2.64794   CTCAAGTGGATACCA               GCGG ACCATG CCGC                AACTCGCTCGTCACA  43 36
APY29_RS18710 NONE
APY29_RS18705 4152461 .. 4152473 - -10.5  -3.53563   ACAGCCTGTTCGAAA                GCGCC GGT GGCGC                GCTGCATGCGACGGT  67 297
APY29_RS18665 4142767 .. 4142786 -   -10   -3.1886   ACGGAACTGCAGCAA            TTGCCGCG TCGA CGCAGCAA             TCTCCGTAATCAATT  64 203
APY29_RS18660 NONE
APY29_RS18655 NONE
APY29_RS18650 NONE
APY29_RS18645 NONE
APY29_RS18640 NONE
APY29_RS18635 NONE
APY29_RS18630 4133875 .. 4133920 -  -9.5  -4.08767   CGCATCCGCCGAAAA CCGCGCAG-CGCCCGCGGCAAC CGC GTCGCCGGCAGCGGCAGCGTGG TGGCGACCAAGCGCA  75 266
APY29_RS18570 NONE
APY29_RS18565 NONE
APY29_RS18560 4120770 .. 4120801 - -10.1  -2.83409   TATCAAGGCATGACA      GGCAGCCGCCG ACGCCGATTG CGGCGGCTGGC       GCGATTGGCTCACGC  61 35
APY29_RS18555 NONE
APY29_RS18550 4119356 .. 4119377 -  -8.7   -3.0634   AACGGGACCGCAAGA           CGGCG-ACGC GCG GCGTGCGCCA           GCAGGACAGCGATGG  57 75
APY29_RS18545 4118009 .. 4118056 - -14.1  -3.67597   TCGGCCATCGAACAA CGCGATGGCGCACGCGCGGAA TTACTG TTCCGCGAACACGCCAACACG CAACGGCACAGCATG  81 214
APY29_RS18535 NONE
APY29_RS18530 NONE
APY29_RS18525 4114702 .. 4114721 -   -15  -3.25823   GCCGCGCCAGAGCAA            CGGGCAGC CTGG GCTGCCCG             TTGCTCTGGCGCGGC  82 140
APY29_RS18485 4106331 .. 4106350 -  -6.4  -3.39895   GCGCTCACCAAGCAA            TGCAACGC GTCC GCACTGCA             TCGTGCAGCCTACGC  57 106
APY29_RS18480 4105777 .. 4105789 -  -4.7  -3.15249   GACATGGTCGAGCAA                CCGCG CCG CGTGG                CCGAACGCATGGCGA  47 350
APY29_RS18460 NONE
APY29_RS18455 NONE
APY29_RS18435 NONE
APY29_RS18430 4098595 .. 4098653 -  -8.7  -3.05844   TGCTGGATCTGAAGA TGCCCGAGTTGGACGGCTACGCGCTGCTG GAA CAGCTG-GCGCGGCTGTCAGACCCGGGC- CAGTTCCTGCCGGTG  55 339
APY29_RS18410 NONE
APY29_RS18405 4094257 .. 4094286 - -12.1  -5.00616   CCTCCGCTCAAAAAA       GATGGCCGCGCCG TCTC CGACGCAGCCATT        CAAGTTGCCTAGCAC 100 150
        prmC 4086458 .. 4086472 -  -4.2  -3.53012   CGGTCCTGCGGGAAA               CCGCTA GTG TATCGG               CAGCTGCGCACGCAC  51 230
         pip 4085182 .. 4085230 -  -5.2  -3.66356   ATGTCGAACTGGAAA TCCGCCAGGACCTGATTG-CCGAC GCG GCCGGGCAA-CAGGCCTGGGCAGC GCGCCTGGCGCGCAT  57 292
APY29_RS18335 4079790 .. 4079824 -  -2.2  -3.04715   GACTGGGCTGAAAAG    TCATG-C-GCAAAGGC TCCCC GCCTCTGCAGGCGTGA    AAATTTTCGAACGAG  41 217
APY29_RS18330 4076995 .. 4077014 -  -2.8  -4.12941   AAGAAATACGAGAAA            CT-CTGCCA TTG TGGCCGCAG            CCCGAGGCAGCAGTC  61 447
APY29_RS18320 4075184 .. 4075216 -    -9  -3.31726   CTGCCGCATACAAGA      GCGCAACCGGCACG TATTC CGCGTCGAATGCGC      ATTCCGCTTCAAAAC  63 202
APY29_RS18315 4073186 .. 4073203 -  -6.3  -3.37499   CAACAGCGCAACGAA             CTG-CAGC AAC GCTGGCAG             AAGATGAGCCCGGCC  55 496
APY29_RS18295 NONE
APY29_RS18290 4069698 .. 4069708 -  -8.2  -3.75937   AGAGATACATGGAAA                 CGCG CTG CGCG                 TTTGCCGCAGGGCCC  69 284
        sufT 4068384 .. 4068416 -  -7.8  -2.90496   TGGCGGGCGAAAGGA     CG-CA-GCGCCACATC GTG GACATGGCGCGTGACG     ATCAGAGCATGCCGG  53 27
APY29_RS18275 4067219 .. 4067244 - -14.7  -5.27335   TTGCGCAAACAAAAA         GGCCCCCGTGC TGAC ACACGGAGGCC          CTTGTTTGGCGAAAT 100 49
APY29_RS18270 4065114 .. 4065148 -   -12  -3.08867   CCAAGTGGCAACACA     TCGCCTGCGCCTGCCG AAA CGGCAGACCTGGGCGA     GGTATCGCAATGGGG  68 104
APY29_RS18265 4063509 .. 4063552 - -16.2  -2.71712   CGGGCGTCGGGAAAG GCC--CGAC-GCGATGCCGGC TGCGT GCCGGCATCGCGGTCGTCGGC GCAGGTTTACGGGGT  81 32
APY29_RS18260 4061330 .. 4061341 -  -7.2  -3.61268   GAGTGAACGCGTAAA                CGCG ATGC CGCG                 CGTATCGGCCGGTAT  62 205
APY29_RS18245 4058399 .. 4058435 - -18.8   -4.1822   GGCGAGTCGAACAAA    CCGCATGCGCAACTGC GCGAT GCAGCTGCGCATGCGT    CCGGCCGAGGTGGTC 100 194
APY29_RS18230 NONE
APY29_RS18225 NONE
APY29_RS18220 NONE
APY29_RS18215 4053560 .. 4053575 -  -2.5  -4.30576   GGCCGAGCAGGAAAA              GCGCT TTGCCG AACGC               CGCGAAGACCCACTC  65 316
APY29_RS18185 NONE
APY29_RS18180 NONE
APY29_RS18175 NONE
APY29_RS18170 4044749 .. 4044759 -  -6.8  -3.65351   GGATCTGCAGTGAAA                 CCTG GTG CAGG                 CGGACCTGCCTTTCT  59 49
APY29_RS18165 4043593 .. 4043620 -   -12  -3.14132   CCTCGCGGCGATGAA        GCGTCTCACCCG CGAC CAGGTGAGACGT         GTGGCGGCACCCGGG  70 63
APY29_RS18160 NONE
APY29_RS18155 4042223 .. 4042279 - -17.6  -2.54896   TTTCCAGTGAATGGA GAATCGGGAATGGAGAATGG-CAGGAGC AGC GC-CCTGTCCATTCCCTATTCCCCATTC TCTATTTTTTTTCGG  83 27
        ychF 4041084 .. 4041102 - -13.8  -2.90723   TCACTCTCAACGACA             CGCGGCGC CAG GCGCCACG             CACAGCCGATCACAC  74 35
APY29_RS18145 4040836 .. 4040850 -  -7.8  -2.71731   TCTACCGTTGAACTA               CTCCCG CGC CGGGAA               CTGCATGCCACAACG  52 47
APY29_RS18140 NONE
APY29_RS18135 NONE
         tuf 4039348 .. 4039383 - -10.5   -3.7014   CAAACCCCAAGACAA    CGAA-GGCGGACCG CGGTTCAGC CGGCCCGCCATTCG    TTTGAATCCAGCCGC  74 65
APY29_RS18125 4039237 .. 4039249 -  -3.3  -3.34398   GCTGGGCCGGAAAGA                GGAGT GGC ACGCC                AGGAGGGACTCGAAC  46 17
APY29_RS18120 NONE
        nusG 4038105 .. 4038134 -  -5.8  -2.78384   CGTTTGTTGACCACA      CGCAGATGGCCGCC ATGC GGCAGCCAT-TG-G       TTCCAGGCGGTTCGC  46 104
        rplK NONE
APY29_RS18105 4036853 .. 4036879 - -10.8  -3.57144   TGCTGTACTGCCAAA         TACGTCAGGCGC ATG ACGCCGGACGCA         TTCGCTTACTTCAAC  73 31
APY29_RS18100 NONE
APY29_RS18095 4035321 .. 4035345 -   -15  -3.63968   TCCGAAACGGCCAAA          GGCCGGGAGC TTTAC GCTCCCAGCC          TTCAGTGCATCACCA  85 68
        rpoB 4030892 .. 4030912 - -10.4  -3.03124   CCGTACCCGGGAAGA            GCGAACGC GCTGA GCGCTCGC            CACTTCCGGGTTGCA  62 63
        rpoC 4026416 .. 4026437 - -11.5  -4.72007   CTGCACGAAAACAAA           GGCAGGCCG AAAC CGGCCCACC            GAGACAGAGAAGTAT 100 173
APY29_RS18080 NONE
APY29_RS18075 4025465 .. 4025483 -    -6  -3.54307   AAGATGCGTCGCAAA             CAGCAC TCATATG GTGCTG             AAGGGCCCCGTTACC  57 54
        fusA 4023243 .. 4023263 -  -7.6   -3.3341   AAAAATTTGTGAGAA           GCGGCTGAG CGAA CTCAGCC-C            TTCTTGGTGACAGCG  58 19
         tuf 4021951 .. 4021970 - -12.8  -4.91873   GACAGCAACGAAAAA            GGGCCGGC TTGC GCCGACCC             CTTTTCCACTGCACC 100 73
APY29_RS18060 NONE
APY29_RS18055 NONE
APY29_RS18050 NONE
APY29_RS18045 4019647 .. 4019668 -  -2.2  -2.50994   TTGAACTTCATCAAT           GGCATG-GG ATGGA CCTCAGGCC           TTGGCCGTTACGTCG  37 19
APY29_RS18040 NONE
APY29_RS18035 NONE
APY29_RS18030 NONE
APY29_RS18025 NONE
APY29_RS18020 NONE
APY29_RS18015 NONE
APY29_RS18010 NONE
APY29_RS18005 NONE
APY29_RS18000 NONE
APY29_RS17995 NONE
APY29_RS17990 4014892 .. 4014913 - -12.3   -4.5265   AATTATACGACAAAA           GAGCCCGAC TTGC GTCGGACTC            CCTTGTTGAACAGAA 100 81
        rpsH NONE
APY29_RS17980 4013781 .. 4013802 -  -4.3  -4.25104   GTGCTCCTATCAAAA           GTCAGCACA GGGA TGTGCGGGC            TCTTGCGAGGGACTC  66 45
APY29_RS17975 4013302 .. 4013314 -  -3.3  -4.08767   GGCACCGTTGCAAAA                GAACG GGG CGGTC                CGGCATTTCCCTGCC  58 85
APY29_RS17970 NONE
APY29_RS17965 NONE
APY29_RS17960 NONE
APY29_RS17955 4010329 .. 4010342 -  -5.9  -3.02511   TTGACGCCTGCAATA               CGCGC CATG ACGCG                ATTCTCCAACTGAGT  49 352
APY29_RS17950 NONE
APY29_RS17945 4009555 .. 4009573 -  -3.1  -2.71416   TAGGACCGATATAAC             GAGCCAT TTCTT ATCGCTC             CCTTTAGACGCGACG  40 29
APY29_RS17940 4008938 .. 4008956 -  -3.8  -2.75481   CTCCAATGTGAATTA             CTTCGAAT ACA ACTCGACG             ATCAGCGCTTCGTTG  42 4
APY29_RS17935 4007846 .. 4007875 - -15.7  -4.87665   GTCGATGTAGAAAAA       CAGCATGGGCGCC CGAA GACGCCCATGCGG        TGACGCATTAACCAA 100 33
        rplQ 4007271 .. 4007288 - -14.1  -5.52023   ACCAGCAATAAAAAA             GCCCGGC GTGT GCCGGGC              TTTTCAAGAATCTTT 100 56
APY29_RS17925 4005953 .. 4005979 -  -3.7  -3.67611   TGGACCGGAATAGAA        CCAGCCCATTCG TTGC CGAA-AGGCTGC         AGCACGGCTGGCCAC  53 456
APY29_RS17905 4002109 .. 4002122 -  -8.1  -2.62263   ATGGCTGCCAGAGCA               TGCCG CACG CGGCA                TGAGCATCACGTCAT  53 54
APY29_RS17900 4000578 .. 4000628 - -10.3  -3.72324   TATGCGTACGAACAA CGCAGCCATGCGCGCTTTACGCCT GGCT ATGCGCCCAGTGCGC-CGGCTGCG CCAGGTCCGGCAACG  70 335
APY29_RS17880 3995862 .. 3995888 - -19.5  -3.91897   GCGCGCATTGACAAA         CGAACGGCCGC ACATG GCGGCCGTTCG         ACGGGATGCGATCAG 100 37
APY29_RS17875 3994743 .. 3994773 - -18.4  -3.63991   CACGACGCGCAATAA       CAAAAACGCCGGGC AAT GCCCGGCGTTTTCA       TGACTGCCGTGATCG 100 47
APY29_RS17840 3988216 .. 3988230 -  -2.1  -3.53012   GTTGTGCTTGGTAAA               GATGC TCGTC ACATC               CAGAGCCATCGGGGC  47 203
APY29_RS17835 3987017 .. 3987033 - -10.8  -4.60797   CCTGCATAGACAAAA              CCCGGC ACAAG GCCGGG              TTTTGTCTGCAATAA  95 55
APY29_RS17830 NONE
APY29_RS17825 3985404 .. 3985450 -  -5.7  -2.70932   TGCCGGCTGCAATCA CGCCAAGGGTCGCCGCCACGAT GCCA ACGGCGCCGGCGACGCCCG-CG CTTACGACGTGGTCA  45 50
APY29_RS17810 NONE
        cysT NONE
        cysW NONE
APY29_RS17795 3979650 .. 3979661 -  -4.4   -3.5594   AAGCGAGGCTGCAAA                GACT TATT AGTC                 CAACTGTCATTGCAG  53 244
APY29_RS17790 3978437 .. 3978464 -  -5.6  -4.40333   CCTAAAGAACAGAAA        CACGCACCAGACA GTT TGTCTGGT-CGCT        TCAGTGAACAACGAA  74 442
APY29_RS17780 3976090 .. 3976115 - -11.7  -3.15544   CTCGATCCTGAGCAA         CGTCGGCGCGG TGCA CAGCGCCGGCG          CGGATCTGGCGCTGA  66 506
APY29_RS17770 3971869 .. 3971881 -  -3.4  -2.74461   CACCTACTGGCAAAC                CCAT GACCG ATGG                CAGGGTCGGCACGCG  40 125
APY29_RS17765 NONE
APY29_RS17760 3971163 .. 3971186 -  -3.6  -3.41602   GGGACCGCATGATAA          CCCCTGGCGC CTGC GCGCCGGCCG           CCCCGCGTCAGCGCA  49 33
APY29_RS17755 3970262 .. 3970273 -  -2.2  -4.11027   GCATTAAAAATACAA                CCAC CACG GTGA                 TGCACACAATTGAGA  59 208
APY29_RS17750 3968406 .. 3968427 -    -5  -3.40403   CCGCGGCGATTATAA           GGCCGGCG CCACCC CGACGACC            TCAGCGGGCTGAACG  53 26
APY29_RS17745 3967241 .. 3967292 -  -7.3  -3.09878   TGCAGGCAGTCAACA GC-CACGTGGCGGTCCGCCGGCA GTGCAGTG TACGAGCGG-CTGCCACGTGCGC GGCGGCCGCGTTTGC  54 59
APY29_RS17740 NONE
APY29_RS17735 3964837 .. 3964856 - -12.8  -2.73364   TCCGCATGCCAACCA            GGGCGGCC AATC GGCCACCC             TGGTTCGGTGACTCA  68 38
APY29_RS17730 3964364 .. 3964393 -  -9.3  -3.36878   GCTATGGACGTACAA       CCA-CGAGCGCC CGAATAT GGCGCTCGGCGG       CATCACGCCTGCCAT  63 102
APY29_RS17720 3962609 .. 3962636 -  -6.2  -2.82015   GGTAGATCCACGACA        CAGGCCACGAAC GCAA GTTCGCAGCTCG         CATGCAGGCCACGCT  46 40
APY29_RS17715 3962158 .. 3962168 -  -5.4  -3.19192   CTGTACCGAATGCAA                 GTTG TTG CAAC                 GGAAAATTATGTTTC  48 134
APY29_RS17710 3960759 .. 3960781 - -16.3  -4.66163   AGGTGTAGCTAAAAA           GCCCGGCAC TTGCG GTGCCGGGC           CGGGCTTGGATCGGT 100 51
APY29_RS17705 3960145 .. 3960168 - -11.7  -3.78233   ACAGCAAGACCGAAA          GCGCGCCTG AGGCCA CAGACGCGC           GGCTATGCAGCGATG  78 110
        grxC NONE
APY29_RS17655 3948195 .. 3948218 - -16.7  -3.17194   AGTGCCCGAACGCAA          CGCGCCGCC TCGGTG GGCGGCGCG           TGCGTTACTGGCTTT  86 81
APY29_RS17650 3946994 .. 3947017 - -15.4   -4.2558   GACTTCCGAGCAAAA          CAAAAGGCGC CTAG GCGCCTTTTG           TTTAAGCGATCACCC 100 48
APY29_RS17640 NONE
APY29_RS17635 NONE
APY29_RS17630 3945638 .. 3945654 -  -2.1  -3.01712   TGCTTTGTTGCAACA              CCCTGTG ACA CATCGGG              TCAAACATACCTGCA  41 56
APY29_RS17625 3945481 .. 3945513 - -14.3  -4.59853   TCAATCCTGGAAAAA      GAAAAGCACCTAGGC AGT GCCTAAGTGCTTTTA      TTTGGTGGGCCGTCA 100 28
APY29_RS17615 3943390 .. 3943422 -  -6.2  -3.28924   TAGTTTCGCCGATAA     CGGCGGC-CGC-TGCC AGC GGCATGCGTGCAGCGG     CTTCACGGACAGAAG  52 93
APY29_RS17610 NONE
        clpP 3941209 .. 3941243 - -16.5  -2.80252   ATTTCGAGAATAGCA    CAGGGTCGGG-AGGAC ATTC GCCCCGCCCGACCCTG     CCGGTTTTTCCTACA  81 59
APY29_RS17600 3939762 .. 3939790 - -21.8  -4.72272   TTGGGGCAGTAAAAA        GCCGATGGCCCC GTTAT GGGGCCATCGGC        GAGGTGTTGCAAGTA 100 100
APY29_RS17595 3937189 .. 3937219 -  -9.1  -3.13432   CCCAACAGCACGCAA       GCCAAAACCCA ATAACGACG CGGGTTTTGGC       TTGTTTTGACGAGGC  61 55
APY29_RS17590 NONE
APY29_RS17585 3936633 .. 3936650 -  -3.3  -2.74012   CCAGCATTCTAACCA             GCTGAAC TACC GCTCCGC              GCTTGAAACGTTTGC  40 52
APY29_RS17580 3936536 .. 3936563 - -14.2  -4.37092   ATGTCGTGGAGAAAA        CGAAGCCCCCAA TTGC TCAGGGGCTTCG         TGTGTAACTGGCGGA 100 34
APY29_RS17575 3936368 .. 3936390 - -14.1  -5.83822   GACAGTCAAAAAAAA           GCCCCCGGC ACAAG GCCGAGGGC           TTGGTATAACTGGCG 100 36
APY29_RS17570 3934109 .. 3934124 - -11.8  -5.27938   ACGCCCAAAGAAAAA              GCCCGG TTGC CCGGGC               TTTGCTCTCACCAAT 100 54
APY29_RS17555 NONE
APY29_RS17550 NONE
APY29_RS17545 3929206 .. 3929247 -  -4.3  -3.76839   CAAGGCGAACTCAAA TCCGG-CATGCAGCTACTGC TGT GCAGCGACGGCCTGACCGAA GAGGTGGACGATGCC  58 464
APY29_RS17535 3928212 .. 3928227 - -11.8  -5.07523   TACACATAAACAAAA              GCCCCC TTGC GGGGGC               TGATGCGAATCTGGC 100 195
APY29_RS17530 3927435 .. 3927446 -  -3.6   -3.8709   AAATTCCTGCAGAAA                CCGG CCGA CCAG                 CTGAGCTGGGGAACG  57 314
APY29_RS17520 NONE
APY29_RS17515 3924975 .. 3924992 - -10.5  -3.14211   ATCCGGCTGCAGCAA             GGCGCCC ATCA GGGCACC              GTCGCGGCGGTCGGG  64 16
        moaA 3923658 .. 3923676 -  -5.8  -3.78934   GTTTCGCCACAACAA             GCTGCGCG AGG CCCGCCGC             TCAATCCCCTGACGA  60 301
        moaC 3923035 .. 3923065 -    -6  -3.34715   CAGGCTGGCGAAATA       CAGCACCGTCACCG TGG CGGTCATTGTGCCG       CTCCGATGTCGCGCT  52 15
APY29_RS17500 NONE
APY29_RS17495 3922287 .. 3922307 -  -6.8  -4.19817   TTGATCCAGCGAAAA            GCAGCAGG CAGCT CGTGCTGC            GCCGCGCGCTTATGC  69 88
APY29_RS17480 NONE
APY29_RS17475 3919145 .. 3919166 -  -8.7   -4.1466   AGGGAATTGTGAAAA           GCAAGACCG CATT CGCTCTTGC            GATTCCCCATTCCCA  76 60
APY29_RS17470 3918515 .. 3918532 -  -4.1  -3.53012   TTCCCGGCCCTCAAA             GCACCTCA CTG CG-GGTGC             CGAAGGCGTGCGACA  51 3
APY29_RS17465 3917969 .. 3917989 -   -14  -4.59773   CCTGACTCGCAAAAA            CGCCGCTC GCAGA GAGCGGCG            TTTTTGTCTGTGCGC 100 91
APY29_RS17440 NONE
APY29_RS17435 NONE
APY29_RS17430 3908716 .. 3908726 -  -4.6  -3.73647   CGGAGCGACCAATAA                 CACG TCG CGCG                 CGGTCGCCATGTGGG  58 136
APY29_RS17420 NONE
APY29_RS17415 3906992 .. 3907009 -  -8.3  -3.05844   TTCCCTATTGCAAGA             GCCGCGG TGAT CGGCGGC              TCCTGAAGAAGCGAG  57 79
APY29_RS17410 3905896 .. 3905907 -  -5.8  -3.28924   CACCGGGCCCCAGAA                GGCA AGGT TGCC                 CCACCGCAAGGGAAG  52 113
APY29_RS17405 3905222 .. 3905268 - -11.3  -3.70902   GGTTCGATAGTGAAA GCGCTGCCGGCCAAGGCGGCGC ACCA GCGCCGGCAAGGCCGGC-GAGG AAGCCGAAGGGTCGG  76 71
        fabD NONE
        fabG 3903149 .. 3903159 -  -8.2    -4.431   GAGGGACTCACAAAA                 CGCC ATC GGCG                 CTGCGATGGCCGCGT  84 128
APY29_RS17390 3902737 .. 3902762 - -14.7  -4.64766   GTGACACTTGAAAAA         CACAGGGCCGC ATCA GCGGCCCCATG          GAATGTCTGATGCGG 100 81
        fabF 3901446 .. 3901465 -  -3.4  -3.53563   ATATGCGGGGTCAAA            CGCGCTTG AACA CCAGCGTG             CCGTTGGTGCCGCCA  49 1
        pabB NONE
APY29_RS17375 NONE
APY29_RS17370 NONE
APY29_RS17365 3897309 .. 3897328 -  -2.7  -3.05816   CTACCGCTGAGCTAA            CCGCCCG GTGACG CGAGCCG             CACATTATAGGGCAG  41 176
APY29_RS17360 3897182 .. 3897196 -  -8.5  -5.64304   GAAGACAACAAAAAA               CCGGC GCATG GCCGG               CTGTTTTCTTCGCGT 100 69
APY29_RS17355 3896369 .. 3896412 -  -6.7  -3.17392   CAGGCGGTAAGTGAA GGC-ATGGTATGCGCACTCA GCACA TGGATGCGCAGCCCATCGCC GTATGCGCCGCAATC  53 134
APY29_RS17345 NONE
APY29_RS17340 3892386 .. 3892400 -    -7  -2.59742   CGCAAGCGGGAGAAG               GCGCCC GAA GGGCGG               ATGAGGGCCAATGCC  48 50
        acnD NONE
APY29_RS17330 NONE
APY29_RS17325 3889238 .. 3889248 -  -4.6  -2.62983   TGCAGCTTCACATCA                 CCGC ATA GCGA                 CTTGCACCAGCGCTA  43 7
        prpF 3887724 .. 3887735 -  -5.8  -3.23899   TTCGAATTAATGCAA                CGCA CTCT TGCG                 ATTTATACGACGGCA  51 87
APY29_RS17310 3885318 .. 3885339 - -15.1  -6.06723   GCTGCCAAAAAAAAA           CCGCCGGCA TGAT CGCCGGCGG            TTCGATAGTGCTACA 100 53
APY29_RS17305 3884249 .. 3884259 -  -2.4  -3.49966   GCTGCAAAAAAAGCA                 CTCG CCG CGGG                 GCACAGGCATTGACG  47 58
APY29_RS17300 3878594 .. 3878618 - -15.7  -4.08064   AAGCGCCCTGCAAAA          GCCCCTCTCCC TGC GGGAGAGGGGT          TGGGGTGAGGGTACG  95 146
APY29_RS17295 3875307 .. 3875340 -  -8.2  -3.02829   CAGATGTTTGCAATA    CGGTAGCGCGGCAGAC GGGC GT-TGCCGCGCTTC-G     CACACGCTGGTGAAA  57 110
APY29_RS17290 3873949 .. 3873971 -  -4.6  -4.14739   GCATGCAGGGCAAAA           CGCGTTTCGG CTA CCGCTGCGCG           ATTCCAGGCCAGCGT  65 384
        pbpC 3871237 .. 3871267 - -15.4  -3.79251   GACTCGATGATGAAA       CAGACAGGGAGCGC CTT GAGCGCCCTGTCTG       TTTTTTTGCCGCTAG  90 263
APY29_RS17270 3869035 .. 3869060 -  -8.9  -5.75342   CCTCTGGAAAAAAAA         CGGCCCGCAGC CGAG GCCACGAGCCA          GTTCGAACGGCCAGC 100 389
APY29_RS17265 3867968 .. 3867989 -  -7.9  -3.53224   CAGCCCTCTTCCAAA           GGAGAGGGG CTGG CCCCCTTCC            CCAGCGCCGGCTGAG  60 149
APY29_RS17260 3866940 .. 3866980 -  -4.6  -3.57462   GATGGGAGGCGGAAA GCGTGCGTGCCAAGCGGCG ATTG CGTC-CTTGGCACCCATCC  TTTCAACCACACGTT  55 296
        hflK NONE
APY29_RS17250 3864531 .. 3864549 - -13.8  -5.04597   AGGCAGATACAAAAA             CGCCCGCA TTA CGCGGGCG             TTCTTGTCTCAAGCC 100 48
APY29_RS17245 3863495 .. 3863507 -  -7.7  -3.86015   CACCGCCCCGACAAA                CCTAC ATC GTAGG                AGCGCACCCGGGCGC  68 241
APY29_RS17240 3861484 .. 3861501 - -10.5  -4.86731   GTTCTGCAAACAAAA             GCCCCGC TCTC GCAGGGC              TTTCGTCGGTTCAAT 100 55
APY29_RS17235 3858441 .. 3858458 -  -9.8  -5.33405   TGCACCAAACAAAAA             GCCCGG AAACTA CCGGGC              TTTTTGTTGCTCCAC 100 49
APY29_RS17220 3856285 .. 3856295 -  -5.4  -3.03771   CCATATTCCGGAATA                 TGGA ATA TCCA                 GCGAGCGAGCTGTTT  47 112
APY29_RS17215 NONE
APY29_RS17210 3855029 .. 3855042 -  -3.1  -3.12351   TGTTTGCAGACCTAA               GCCGAC GAT GTCG-C               AGCTACGCTGATGCA  44 28
APY29_RS17205 NONE
APY29_RS17200 3854296 .. 3854309 -  -3.1   -2.9913   AACAACGAGCACACA               CGCTAG CAG CT-GCG               GCGCCTGCTGATATT  43 87
APY29_RS17195 NONE
APY29_RS17190 NONE
APY29_RS17185 NONE
APY29_RS17180 NONE
APY29_RS17175 3841904 .. 3841926 -  -3.4  -5.28778   AGCAGGCACAAAAAA           CCCACC GGTTTGTCGGA GGTGGG           TACCGCTACACGTGG  89 107
APY29_RS17165 3841263 .. 3841307 -  -4.2  -3.53091   AGCGCCTTGCTCAAA CGCCTGCTGCGCGGCCACGCCG ACC CGGC-CAGCAGCG-AACAGGAA TTCCAGGCCCGCGTC  51 175
APY29_RS17155 NONE
APY29_RS17150 3838914 .. 3838968 -  -6.3  -3.54741   CACGACTCCGGCAAA CGCACCTTCACC-CCAGCCCCTCTCC CGCT GAAGAGGGGCTTCTGGTCAGCGCGCG GCATCACCGCGACGA  59 48
APY29_RS17140 3837023 .. 3837047 -  -9.4  -3.74693   TGTTATCGCAGCAAA         CTCCTTCT-CC ACTC GGCAGAAGGAG          CACGCTAGGCGGATG  71 83
APY29_RS17125 3833891 .. 3833901 -  -6.8  -3.07816   CCTTTAGGGATGCAA                 GTCC GCA GGAC                 ATGAGGCGGATGCGC  51 60
APY29_RS17105 3828057 .. 3828087 -  -9.7  -3.18264   TCTCGCACGGAGCAA      CGCCCGTGCGCGTC CGGC AACT-GCACGGGCG       TTTTGTGCGCTGCCC  61 66
APY29_RS17100 NONE
APY29_RS17095 3825703 .. 3825717 -  -7.8  -4.89063   TCACGGAAAAACAAA               GCGCAC CGA ATGCGC               TCTTACGAATCCCGA  88 72
APY29_RS17085 3823982 .. 3824006 -  -7.2  -3.02263   AGATGGGGGCGAACA          GTGCGAAG CAACCACCT CTTCGCAC          GGTACCGGGCGCTGC  54 92
APY29_RS17080 3820919 .. 3820939 -  -3.9  -3.95986   GTGAAGTGAATGAAA            TGATCCCAA TCG TCGGGCCCA            ATGCATCGCTGCATT  58 374
APY29_RS17060 NONE
APY29_RS17055 NONE
APY29_RS17050 3814198 .. 3814250 -  -4.1  -3.68341   AACTCGATGTAACAA GCGCA-GCGTCAACGCGCAGTGGGC GCGGT GCTCACCTGGCGTTGAAGCATGC-C TGGCGCTTTTCCAAA  56 99
APY29_RS17045 3813462 .. 3813472 -  -6.8  -3.05384   GGCGCGTGGAGCGAA                 GCGA CAT TCGC                 CCAGTGGCTACGGCC  51 208
APY29_RS17030 NONE
APY29_RS17025 3811473 .. 3811494 -  -2.8  -2.53271   GCAGGCCCACAACAT           GCGCGCGC CTCAAT GCGCCAGC            CGCAGCGGCTGCGAC  39 13
APY29_RS17020 3809894 .. 3809917 -  -5.9  -3.02511   TGGATGCCTTCAACA          GCGCCATGC TGTCTC GCACGGCCC           TTGCAATACGCGGCA  49 162
       dnaE2 3806423 .. 3806436 -  -4.5  -3.34398   GGTCGCGGCGAAATA               CGCGCC GCT GG-GCG               ATAGCTTGATGTCGG  49 210
APY29_RS17005 3804411 .. 3804430 -    -7  -3.81488   GTGGGTGAAAGACAA            GCCAGCGC GGCT GCGCGGAC             CTGCATGGTGTAGCA  62 191
APY29_RS17000 3803170 .. 3803219 -  -3.4  -5.08824   CCTGTAGGCAAAAAA TCCGCACCAC-GCTAGCGCCTGCG TCCA CGCGAGT-CCAGCTGCGGCGCGGC GTGACAGTGTGCGCG  78 374
APY29_RS16995 3801140 .. 3801191 - -12.3  -3.50332   CACGCATACAACCAA GCGCGGCCTGCAGATGGCGCATGC TGGGC GCATGCGCCATCTGGCATC-GCAC TCAGGCGACCTGTTC  74 26
APY29_RS16990 NONE
APY29_RS16985 3799409 .. 3799462 -  -9.4  -3.57144   CGGCGCACGCGCAAA GGCAGGAGGTCATGCGTGCACGACG TGGTG CGCCGCGCGCGCATG-CGCCTGGCC CATGCCGCCTGCACG  68 69
APY29_RS16980 3797197 .. 3797217 -   -14  -2.52543   ACCTTGCGCAACCGA            CACGCCGC GCCTG GCGGCGTG            TCGGTCGTCCGTCAC  71 37
APY29_RS16965 3793604 .. 3793617 -  -3.7  -2.78679   CGTGCGCATGCAAAC               GGTCC TTGC GGTCC                TTGCGGTCCTGGCAG  42 157
APY29_RS16960 3793058 .. 3793089 -  -5.8  -3.75461   GAAAGGCGCATCAAA      CCAGGCGCGCGATCG AAA CAATC-CGCCCCTGC      CGCGCCATGATACGC  60 72
APY29_RS16955 3792122 .. 3792163 - -10.3  -2.68823   GCGCGTGGAGACAAG GCGTGCGCTGCGGCCCAGGC TAGCC GCCTGGGC-A-AG-GCACGC GACGCGGTATCGGCC  57 141
APY29_RS16945 NONE
APY29_RS16940 3786778 .. 3786792 - -11.4  -3.63744   GTCCGTGTTAAAAGA               GCTGCC GCC GGCAGC               GATGCGCAGGTAAAT  75 386
APY29_RS16900 NONE
APY29_RS16895 3774174 .. 3774188 - -11.4  -3.87815   TTCCAGTTCTACAAA               GGCCTG TGC CAGGCC               GCCGGCCATCAGGGG  79 381
APY29_RS16870 NONE
APY29_RS16865 3765464 .. 3765487 -  -3.9  -4.56597   CTGCCTGCGGAAAAA         CGCGCTGCGGT GCAT ACCG-A-CGCG          ACCGATTCGGTGGAA  70 404
APY29_RS16830 NONE
APY29_RS16825 3760481 .. 3760493 -  -4.7  -2.65264   CTATCATGCACATCA                CGCGC TGC GTGCG                TGTGATGTTGCGGCT  43 140
APY29_RS16820 3759054 .. 3759075 - -17.3  -6.09133   GAGCGCAAAAAAAAA           CGCGCCGCA AGAC TGCGGCGCG            TTTTCGTCTGGATCA 100 60
APY29_RS16815 NONE
APY29_RS16810 3757698 .. 3757713 -  -3.2  -3.05384   CCGGGTTTCAGCGAA              CATCAC AGCG GCGACG               CACTGGATCTGGGCA  42 277
APY29_RS16775 3753336 .. 3753382 -  -4.3  -5.00616   GCGGCCCGGAAAAAA CCGCCGAATACGCCGCGCTGGGC ATC GCCCACAGCGGCG-ACCCG-CAT CAGGTCACCGGCGAC  83 468
APY29_RS16760 3750593 .. 3750619 - -21.6  -3.27525   CTGTTCCAAACGCAA         GCGCCCTCCCGC CAG GCGGAAGGGCGC         GGTCGATCGGCGCCT 100 129
APY29_RS16730 3746823 .. 3746857 - -12.1  -3.74347   TGCAGAAACGCGAAA    GATCGGCGGCGGCTCC GTGT GGAGCCGCCG-CTTTC     ATTTCAATGCTGGCG  78 66
        rplU NONE
APY29_RS16710 3742448 .. 3742463 - -11.8  -4.98531   CCGTCAAACGAAAAA              CCCCGC CGAA GCGGGG               CTTTCCGTCTCGTTC 100 87
        obgE 3741166 .. 3741181 - -11.8  -5.10064   GGTAATACAGAAAAA              CCCGGC CTTG GCCGGG               TTTTTTGTGCGCCTG 100 50
        mviN 3738971 .. 3738984 -  -9.5  -2.56124   TCGATCCAAACAGAT               GCCGG CCGG CCGGC                CCTCGTTGATACATA  56 177
        ribF NONE
APY29_RS16685 3734998 .. 3735055 - -12.8  -2.55351   TCGCTGCAGAGCAAC CAGGGCTACC-CCGGCGTCTGACGCGGAC TGC GCCAGCGCCAGACGCCGGCAGT-G-CGTG GCTAGGTCCCTGCCA  67 62
APY29_RS16680 NONE
APY29_RS16675 NONE
APY29_RS16670 3733054 .. 3733081 - -15.6  -4.58466   TTTAGAAGGAGAAAA        GCCCCGAGAATC CTAG GCTTCTCGGGGC         TTTGGAAATGGTGCC 100 34
APY29_RS16665 3732252 .. 3732270 -    -6  -2.98823   CCTGCTCGACAGAGA             GCGTTG GTGGATA CAACGC             CGAGAGATATTCGAT  49 225
APY29_RS16660 3731052 .. 3731064 -  -6.9  -3.60792   TTCCCAAGCTGGAAA                GCCGC ACC GCGAC                TCTGCCTACCACTTG  59 104
APY29_RS16645 NONE
APY29_RS16640 3727316 .. 3727334 -  -4.5  -3.54543   AGCCATCCCTCGAAA             TCGGCTG GCTCA CAGTCGA             TACACCCACTACTTC  52 405
APY29_RS16590 3719647 .. 3719694 -  -8.3  -3.50853   CTGGTTCAACCACAA GCGCCTGCTTGGCCCGATCGG CGACAT CCCACCGGCCGAAGCAGAAGC GAACTACTATCAGCA  63 105
APY29_RS16580 3717342 .. 3717352 -  -6.8  -3.13522   AGGTGGGCAGCAAGA                 CGCT CCA AGCG                 TGGCAAGTTTCTGGC  53 148
APY29_RS16555 3712270 .. 3712290 -  -3.2  -3.41222   GCCCAATGGTAAACA           CGC-GGCAC AACA GTCCCAGCG            GCGCCTCTTGGTCCT  49 304
        cyoA NONE
        cyoB 3705811 .. 3705821 -  -5.4  -2.56596   TGGTCGAGGAAGCCA                 TGGT CAT ACCA                 CCTTCGCGGCCTGCG  43 18
        cyoC NONE
        cyoD 3704791 .. 3704810 - -13.6  -5.75342   GCGGGCGAAAAAAAA            GCCGCCAA TTGC TTGGCGGC             TTCTTCTTCAACGGG 100 65
APY29_RS16515 3702729 .. 3702764 - -19.8  -3.48276   GCTGCGCTCACACAA    CAGCGGCATGACCGGT GAAG ACCGGCCATGCCGCTT     GGATTCCACCGATCC 100 72
APY29_RS16510 3700959 .. 3700986 - -21.4  -3.18383   ACCTGTAGTGACCAA        GCCGGACGACCA TCGA TGGTCGTCCGGC         AGTCGGTCGGAACGA 100 139
APY29_RS16505 3700244 .. 3700279 - -17.6  -3.91897   TGGCGCACTCACAAA    CGACAACGGCGCAGGG AGAC CCCTGCTCCGTTGTCC     GCTTTCATAACGCGC 100 44
APY29_RS16495 3696738 .. 3696752 -  -2.8  -3.15544   CGGTAGCGCTACCAA               TCCG TGGGTTG CGGA               AATTACCGCTGCAAG  44 28
APY29_RS16490 NONE
APY29_RS16485 3692115 .. 3692133 -  -6.6  -3.42056   ACGCTCAATTCAGAA             GGCACGCT GAA AGCGCGGC             GTTGCATCCAGGGTG  55 220
APY29_RS16475 3690798 .. 3690853 -  -2.7  -3.29142   GTGACCAACAACAGA TGGCCCATCCGCAGGATCGGAAT-AC GCTCCAT GTCAGTCCG-CCCTGCTGAC-GGCCA CGCCGGTGCGCTTGA  45 3
APY29_RS16470 NONE
APY29_RS16465 NONE
APY29_RS16460 NONE
APY29_RS16455 3688195 .. 3688212 -  -3.4  -2.66216   GTCGACGACCAGAAT             GTGGTGC TTACT GC-CCAC             GTGTCTCCTCCGCTG  39 15
APY29_RS16450 3685888 .. 3685921 -  -9.5  -2.78384   TGGTGCGCGAGGACA     GCGGCGCTGCGAT GGTGCTGT ATCGCCGCGCCGG      ATCGCAACAGCCCGG  55 361
APY29_RS16440 3681794 .. 3681819 - -15.5  -3.45324   CACCTGCAGGAAACA         TCACTGCGGCA CAGA CGCCGCAGTGA          CTGCAATCAGGCGAT  85 48
APY29_RS16405 NONE
APY29_RS16400 3672763 .. 3672782 -  -7.2  -3.14229   AGATCGGCATCAACA            CCAGCT-TC GGC GATAGCTGG            GTGGATTTTGTCGCT  52 239
APY29_RS16385 3667914 .. 3667927 -  -2.3  -3.14132   GTTCTTCGGCAGCAA               GTTCG TCAT CGAGC                TGGTGCTGGGGCCGC  43 203
APY29_RS16370 3666546 .. 3666570 -  -9.9  -3.60098   ACCGCGGAGGGGAAA          CGGGTGCCGAT TAT AGCGGCACCGG          CTGGCGGCCTGCCCC  70 64
APY29_RS16365 3664644 .. 3664667 -  -4.4  -4.02132   CGCTAAATCGATAAA          CGCCGAAGCC GGTT GGGTGCGACG           TGCCGGTGGCCCGAA  61 503
APY29_RS16360 3663335 .. 3663354 -  -3.5  -2.66183   TTACAGAAGATCAAC            GGCACAA CAACGC CTGCGCC             TGTTCCCACCATTGC  39 1
APY29_RS16355 3662503 .. 3662516 -  -3.7  -2.78715   AAGCCGGCGATTATA               GCGCC CCCC GGCGG                CGAAGCCAAGTCACA  42 51
APY29_RS16350 3662187 .. 3662205 - -14.6  -3.01791   ACCCGGCCCTCAAGA             TCAGGCCG CAG CGGCCTGA             GACTTGGCTTCGCGA  78 7
APY29_RS16345 3661639 .. 3661649 -  -4.6  -2.97475   GCTTTGATCAGAAAT                 CCGG ATC CCAG                 TCCACCACGATCAGG  47 7
APY29_RS16340 3660748 .. 3660763 -  -4.6  -3.12668   GAGGGCCAGACGCAA              GGCTGG CCAG CAAGCC               GCATATTGTACCCCA  48 71
APY29_RS16335 3660203 .. 3660222 -   -15  -3.89215   TCCCACAAACGCAAA            CAGCCGCC CGAA GGCGGCTG             TCTGGCAATGGCGGG  89 60
APY29_RS16325 3657419 .. 3657429 -  -5.4  -2.87132   TGCCCTGCTGACAGA                 TGCT GTC AGCA                 GTCGGCTCCGTAGCC  46 20
APY29_RS16320 3656563 .. 3656582 - -12.1  -3.53811   GCGATCTTGCGCAAA            CGCCGGC TCGGTT GCCGGCG             TCTTCGGCGACGATG  75 152
APY29_RS16315 3656008 .. 3656027 - -12.8  -3.75153   GCCTGGTAACGCAAA            CGCCCCGA ATCA CCGGGGCG             TTTGCGTTTGCGGGT  81 72
APY29_RS16295 NONE
APY29_RS16290 NONE
APY29_RS16285 3642412 .. 3642433 -  -7.3  -3.12482   CAACACCACGCAACA           CATATCCTG GAGA CAGGGTATG            ACTAGATTCGGTAAC  56 404
APY29_RS16280 NONE
APY29_RS16275 3639443 .. 3639459 -  -6.5  -2.56715   ACCGCTAGCAAGGGA              GTCAGCG TAG CGCTGAA              CAACGGGCATTGATA  48 456
APY29_RS16270 3638440 .. 3638479 -  -6.9  -3.53012   CGGGGCCTCCGCAAA  GCCGAGCGGCTCTATCC GCAGGA GGCCGGCGCAGCTCGGC   GGCGCGACCAAGGGT  58 318
APY29_RS16250 3631663 .. 3631675 -  -3.3    -3.794   GCTCAACGCACGAAA                CTGTG CCA CTCAG                CGTCCCCTCCCACGC  54 70
APY29_RS16245 3630807 .. 3630846 - -10.6  -2.71637   CACGAAGACGACAAG  GCGCCGCGGCGCAAGGCGT TCA ACGGCCTGTGT-GCGGCGC  TGCTGCAAACCACGC  60 381
        mmsA NONE
APY29_RS16215 NONE
APY29_RS16210 NONE
APY29_RS16205 3617447 .. 3617468 -  -5.2  -3.63744   TCGGTTTCCAAAATA           GGACCATCT TCAAT AGATGG-CC           GGGATCATCACCGAT  55 154
        mmsB 3616516 .. 3616526 -  -4.6  -2.76696   CGCCCTTCCAACAAT                 CCGC GGC GCGA                 GCCAGGTGGCTCGTT  44 39
APY29_RS16195 3615165 .. 3615181 - -13.7  -3.63515   TCTGATTTGCAAGAA              GGCTGCC GTT GGCAGCC              TTCTTTTTGCGTCAG  81 199
        rpoE NONE
APY29_RS16180 3611222 .. 3611239 -  -5.5  -3.43492   CGACAGGGACCAGAA             CCCGCGT AGCA ACACGAG              CCCAGCACGATAATG  55 79
APY29_RS16175 3609539 .. 3609574 -  -6.9  -4.19238   TGGGGAATCGGAAAA   GCCAG-GCGTGCTCC-CG TAT CGCGGAGC-CGCTCTTGC   CATTCCCGATTCCCG  69 58
APY29_RS16170 3607548 .. 3607560 -  -3.3  -3.27525   CCTTCGGAAAGGGAA                TCGAG AAT CGCGA                ATGGGGAATAGGAAC  46 94
        lepB NONE
APY29_RS16160 NONE
APY29_RS16155 NONE
APY29_RS16150 3604660 .. 3604688 -  -4.5  -5.62552   AAAAAAACGAAAAAA        CCTCTCCTCGGCA GCA TGCCGACCAAAAG        CCTGACCCAGCTTTT 100 88
APY29_RS16145 3603797 .. 3603808 -  -2.2  -3.14132   GCTCCGCGCCATCAA                CGACG GCG CG-CG                AGATCCTCGAGCATT  43 10
APY29_RS16135 NONE
APY29_RS16130 3600483 .. 3600497 -  -4.9  -3.53091   ATGTCGCGCTGCAAA               GCGAC CTGGT GCCGC               GCATCATCTGTTCTT  53 126
APY29_RS16125 NONE
APY29_RS16120 3598466 .. 3598517 -  -4.2   -2.8194   GAATCATGCATCAGA GTGACGCCCGATCATGCCGGATGCG GGG CGCGTCCGGGCCGATGCGGCG-CAT GGGCACGCCTTGGAC  42 146
APY29_RS16115 3596892 .. 3596902 -  -2.4  -2.62983   GGCAGGCTCACAGCA                 CCTC GAT GTGG                 GCCCGCCAATACGCG  38 7
APY29_RS16110 NONE
APY29_RS16105 3595151 .. 3595172 - -11.5  -2.81535   CAGCGAAAGACATGA           TGGGGCGCG CACG CGCGCGCCA            AGCTGCCCGCAACGA  63 62
APY29_RS16100 NONE
APY29_RS16095 3594036 .. 3594051 - -11.8  -5.75945   ACCGGCGAAAAAAAA              CCCCGC CGTG GCGGGG               TTTTCAACCGCACAA 100 51
APY29_RS16090 3592238 .. 3592259 -    -3  -2.71144   CATCCGCGGCAATCA          CG-ACCGCGC CCTG GC-CGGTGCG           GATCTGCACATCGAA  40 475
APY29_RS16040 3582851 .. 3582869 -   -16  -4.58395   GCGAGTTCGGAAAAA             GCCGCTGG TTT CCAGCGGC             TTTTTCTTTGCCTGC 100 44
APY29_RS16025 3578124 .. 3578152 - -23.3  -3.64703   GCGCGGCGAGTGAAA        CCCTGTCCAGGCA CGC TGCCTGGACAGGG        ACCACATGCCTCAGC 100 56
APY29_RS16000 3573270 .. 3573282 -  -5.5  -3.49475   CGCAGCGCCACATAA                CATGC ATC GCACG                CTAACGATTCGAATG  55 326
APY29_RS15995 3572950 .. 3572970 - -18.3  -4.30719   CCTCGGCAGAAGAAA            GGAGCGGCC ATT GGCCGCTCC            TTCGCATCACAGGTA 100 85
APY29_RS15985 3571893 .. 3571908 -  -7.5  -4.16016   CCACGCTGGAAGAAA              CCGGC GAGCGT GCCGG               CAGCGTATTGCAAGT  69 294
APY29_RS15955 3566537 .. 3566551 -  -5.6  -2.72344   TCTGATTGCCAAGGA               TGAGCG CGA CGCTCC               TGCTCGACGCGGTTC  46 232
APY29_RS15945 3563564 .. 3563597 - -14.6  -3.65902   GCCACCCGATCGAAA     CGGCGCCGCGGACGC TCGAC GCATC-GCGGCACCG     GCAACTCAGCAACTC  85 31
APY29_RS15940 NONE
APY29_RS15935 3562495 .. 3562522 - -16.4  -5.03994   GCCGAGACACAAAAA        GAAACGGGCAGC GTGC GCTACCCGTTTC         CGCCTTTATCGTCCT 100 93
APY29_RS15930 NONE
APY29_RS15925 NONE
APY29_RS15920 NONE
APY29_RS15915 3559079 .. 3559097 -  -2.2  -3.71848   GGGCGGCAGGAATAA             GGCCGCGC GCG ACGCTGGC             GCCAGGCATGCCGGT  52 300
APY29_RS15905 NONE
APY29_RS15900 3555104 .. 3555114 -  -4.6  -3.31144   CGCGCACCGCGACAA                 CCGC GCA GCAG                 TCACTTGGTTGCGCT  50 96
APY29_RS15805 NONE
APY29_RS15800 3532223 .. 3532238 -  -7.6   -3.4072   TATCTTGCAGGACAA              GATCCA GCGC TGGATC               GCCACGCAGAAGGGC  60 232
APY29_RS15780 3526467 .. 3526487 - -11.1  -3.71487   GATGACAGCGAACAA            GGCCGCATG CGT CATGCGGCG            GGAGACAGCGACGCG  76 328
APY29_RS15770 NONE
APY29_RS15765 3523085 .. 3523113 - -21.9  -3.07816   GCCTGAGTTACCCAA        GAAAATCCCCGGC AAT GCCGGGGATTTTC        ATCTCGGTCTGCCTG 100 112
APY29_RS15750 3520197 .. 3520233 -  -8.8  -2.80016   TCCCATCATGAAGCA   CCGCAGGCATTCGCGGTG GGA CACCG-GAATGCCC-CGC   ATTTTTAGCAGTGGC  54 101
APY29_RS15700 3509053 .. 3509084 -   -26  -3.60296   GATTGGCACGCGAAA      CAATGGCGGCCCGG ACGC CCGGGCCGCCATTG       TTGTTTGAACACCCT 100 55
         map NONE
        glnD NONE
        dapD 3486032 .. 3486046 -  -2.1  -3.54543   ACCTAGCGCGCCAAA              GGCGCA TCCT TG-GCC               GGCGCTGCGCGGCAG  49 62
APY29_RS15600 3485310 .. 3485323 -  -9.5  -2.79796   CGTCACCGCAGTAGA               GCCGC ATCT GCGGC                GTTGATGGAGGGATT  57 239
        dapE 3483943 .. 3483962 - -13.6  -5.96219   CACCCATAAAAAAAA            CCCGCATC GGCC GATGCGGG             TTTTTCTGGTTCCTG 100 223
        asnB 3482118 .. 3482158 - -25.6  -3.05935   AGACGCGCCAGTCAA CGCAGCGGCCGGCCGTGCA GCGA TGCAC-GCCGGCCGCTGCA  GTGACTGCAGCCTTT 100 39
APY29_RS15575 3478153 .. 3478180 -    -4  -3.85698   TCGCTGCTCCACAAA        GC-GCCTCTCCCC TTG GGGGCGAGGTTAC        GGGCACCACGCACTA  58 38
         bfr 3474891 .. 3474919 -   -14  -4.18094   CAAAGCACGTCAAAA       CCTACTCCTGCAG CCGG CTGCAGGAGT-GG        CAGGCAGGTCGCACA  93 144
APY29_RS15545 NONE
APY29_RS15540 NONE
APY29_RS15535 NONE
        emrB 3465203 .. 3465220 -  -9.8  -4.48987   CCGTCACAACGAAAA             CCCCGC ATTCCA GCGGGG              TTTTCGTTGTTCAAC  95 53
APY29_RS15510 NONE
APY29_RS15505 3458060 .. 3458101 -  -3.5  -4.25104   GGCCGCGCACGAAAA TCCACGCCCACCTGCGACGG CGT CCAGCGC-GCTGAGCCTGGG TGACCTAACCGCCGC  64 50
APY29_RS15495 NONE
APY29_RS15490 3456194 .. 3456214 - -10.5  -2.66316   CGTTTGATTACATTA            CTGAATGGC CAA GCCATTCAA            TCACATCATCTGCGG  59 50
APY29_RS15485 3455591 .. 3455628 - -19.9  -3.53811   CGCACTGCGTTGAAA   CCAAGACGCCGCCCGGA GCGA TCCGGGCGGCGTTTTTG    ATGGTCGCGATGAAG 100 69
APY29_RS15475 NONE
APY29_RS15470 3452367 .. 3452397 - -12.4  -3.66908   TTCGTCGAAAAGTAA       CGCGCCGCGCATGC AAG ACCCGTGCGGCGCG       GCGTTTCGTCTGAAA  75 145
APY29_RS15455 3447630 .. 3447672 -  -9.1  -2.52464   CGTCCCTGCAACTCA CCGGCACCGGCCACGCCTGCG CAA CGCAGGTGCAGCCGGTT--GG ATCGTCGCAGTTACT  56 36
APY29_RS15450 NONE
APY29_RS15445 3445873 .. 3445896 - -12.4  -3.86252   GCCGATCAAATAGAA          GGCCGGCATG TGCG CATGTCGGCC           TTTTCGTCTTACGCA  81 111
APY29_RS15430 3443236 .. 3443294 - -28.5  -3.29461   CAACGGCCGCGACAA CACAGTCGCCACGCAACAAAAAGGCCCG GCGA CGGGCCTTTTTGTTGCGTGGCTACCGC- GCTCCGCGCAGCCGG 100 42
APY29_RS15415 3441008 .. 3441035 -  -4.1  -3.53091   ACCTGTTGCTGGAAA       CCGACGCGCCGGA TCAG CCCGACGC--CGG        CATCCGCGGCCAACG  51 217
APY29_RS15395 3437670 .. 3437692 - -19.2   -3.2614   GATGGCGCAGACGAA           CAGAGCCGGC AAT GCCGGCTCTG           TTCTTACCACTGCGC  93 68
APY29_RS15390 3436362 .. 3436378 -  -9.4   -3.3095   ACACATGGTCCAGAA              GACGCC GAACA GGCGTC              GCATCACATCCTTGC  63 62
APY29_RS15385 3433690 .. 3433718 -  -8.8  -3.14132   GCTCCGCGGCAGCAA        CGAGGGGCTG GCAGTGTCA CAGCCCCGCG        TGCCTTTGCAAAGCC  58 100
APY29_RS15380 3433019 .. 3433042 -  -5.8  -2.62983   GCCACGTGCAGATCA          CGCAGACGGC TCAT GCCGCCACCG           ATGCAGCTGCCGGCA  46 12
APY29_RS15375 NONE
        asnB 3430799 .. 3430827 - -10.1  -3.53444   TCAGGGCTGGTGAAA        CGCCGCCGGCATC TGT GGCGCAAGCGGCG        GTGCATACACGCGAG  68 105
APY29_RS15365 3429999 .. 3430029 -   -14   -3.1739   AGACGAGGGCAGGAA       GCATAGTCATCGGC GCA GCCGGCGACCATGC       ACAACTCTGTGGATA  76 178
APY29_RS15360 3428445 .. 3428462 -  -2.7  -4.00042   CTCGGCAGCAAACAA             TTAGGCT GCGC AGCATAA              GCCAGCGGACGCCAC  57 93
APY29_RS15355 3426946 .. 3427002 -  -4.5  -4.77165   CCTTGCAGAAGAAAA CGC-GCAGAAGCGAGC-ATCCGCTGACC ACGC AATCAGGAGCTCGCTCGCC-CTGCCGCG CGCCTAGCCGCGCGT  75 29
APY29_RS15350 NONE
APY29_RS15345 3425908 .. 3425927 -   -15   -5.1675   CCATGCAGCAAAAAA            CAGGCCGC TTTC GCGGCCTG             TTTTGCGTACATCAG 100 88
APY29_RS15335 NONE
APY29_RS15330 NONE
APY29_RS15325 3421626 .. 3421641 -  -3.2  -4.33739   GAAAAAACGGGAAAA              GTCCAT TGGG ATGGTC               CTGAAAGAGGTTGCC  64 193
APY29_RS15320 NONE
APY29_RS15315 NONE
APY29_RS15310 3416229 .. 3416256 -   -17  -2.61264   CGCTGCAGCCAGAAC        TGCAGGGCGACC CACT GGCCGCCCCGCA         CGCATCGCTCAACGA  83 34
APY29_RS15300 3414630 .. 3414651 -  -7.9  -2.75074   CTCATGCCAAGACGA           GGCCTCAGCC GCA GGC-GTGGCC           CGCGTCGTCGGTGGG  52 8
APY29_RS15290 3412004 .. 3412015 -  -7.2   -4.3129   GACTCATGACCAAAA                CGGC CAAG GCCG                 GGATTCCCCGATGCA  76 349
APY29_RS15280 3410291 .. 3410305 -  -4.2  -3.39895   TTTTTCAGCAACCAA               GGCTTG CGT CAAGCG               AAGGTGCGTTGCGCA  51 196
APY29_RS15275 NONE
APY29_RS15270 3406242 .. 3406255 -  -2.3  -3.73068   GCGCCAACTGAACAA               GTCCT TCTA AGGTC                GCTGACTTGTTGACC  52 395
APY29_RS15265 3404725 .. 3404750 -  -3.9  -4.09685   CGTTATTTTTCAAAA         CCTTGCCAGTA GCTA TACCGGCATCG          CGTTGGTTGCTTACA  61 436
APY29_RS15240 3398532 .. 3398550 -  -6.7  -3.60971   AGGTCAAGCTGGAAA             TCGCCCT GGCCA AGGGCAA             ACAGAATCACGACAA  58 248
APY29_RS15230 NONE
APY29_RS15225 3397130 .. 3397151 -  -7.3  -4.26903   CTGACCGGACCAAAA           CGCATCC CCTTAAAC GGATGCG            TTTTTCGTTTTGCCG  76 231
APY29_RS15215 3396123 .. 3396144 - -15.9  -2.59431   CCGCCCCACAACGGA           CAAGGCGGC CGAA GCCGCCTTG            TCATTCGCACTAGCG  77 57
APY29_RS15205 3392939 .. 3392953 -   -10  -3.54146   CGTTTCAAGCAAACA               CGATCG CGC CGATCG               ATGCCGGTTATCGCG  70 33
APY29_RS15200 NONE
APY29_RS15195 3390206 .. 3390264 -   -16  -3.57462   GACGCGACGCGTAAA GGATACCGGGA-TGGGGAACGGCTAGC TTTAGC GCTTGCCGATCCCCACTCCCGACTCCC AAATCACGGCTTACT  91 36
        dnaJ 3388924 .. 3388964 - -12.5  -4.60487   GAGCAGCCCCAAAAA  TAGCCCAACGCGCCGCATG CCG CATGCCGCATGCCGGGCCA  TCGTGACATCACGCC 100 48
APY29_RS15180 NONE
APY29_RS15175 3386328 .. 3386338 -  -6.8  -4.59773   CGCGACTGCCAAAAA                 CGAC GAC GTCG                 TCCAGCTCGCCACCT  78 187
APY29_RS15095 3364774 .. 3364812 -  -3.8  -3.14463   AACGCGCTGGAGCAA  TTCCGCAC-CGGCACCA CCCATC TGGCGCTGTGCGTGGAA   GAAGAAGGCCGCATC  45 402
        aspA 3361690 .. 3361720 -   -11  -3.14132   GCCTGTGGCGACCAA       TCGTCTCGCCGCGC CGA ACGCGGCAAGCCGC       GCGTTGCGGTCACCA  64 474
APY29_RS15045 3356645 .. 3356658 -  -8.1  -3.47303   AAAAGTGAAAAGACA               CGCCA CCGA TGGCG                CTGAATGCGCATTGT  63 73
APY29_RS15040 3355647 .. 3355659 -  -3.3  -2.73875   TCCTGCGGAAGATCA                GGGAA GGA TACCC                ATCAGTTCGACATCG  40 10
APY29_RS15035 NONE
APY29_RS15030 NONE
APY29_RS15025 3353239 .. 3353256 - -10.5   -5.4477   AAATGCCTAAAAAAA             GGGCACC CGTA GGCGCCC              GTATACAACACACAC 100 56
APY29_RS15020 3351978 .. 3351991 -  -5.3  -3.73775   TGCAGTGGCATCAAA               TTGGA TCGA TCCAA                TTAGGCCTTTTCCGC  58 148
APY29_RS15015 NONE
        fucP NONE
APY29_RS15005 NONE
APY29_RS15000 3346909 .. 3346921 -  -3.3  -4.74453   GAACACAGCGAAAAA                CGCAC CTT GTTCG                ATCTGCTCGATGCCG  75 393
APY29_RS14980 NONE
APY29_RS14975 NONE
APY29_RS14970 3340049 .. 3340085 -  -9.4   -3.1706   AACGCACTGCAGCAA   GCGCTCGGACCTTGCCGC ATC GCTGC--GACCCGAGCGC   GCTCCAGCGTTGCCG  61 74
APY29_RS14960 3338116 .. 3338137 - -10.1  -4.63527   GCACCAGTTTAAAAA           GACCTCCGA GCAA TCGGGGGTC            TTCTGGTTTCTGCGG  95 311
         rnr 3335323 .. 3335359 - -10.7  -3.78775   CTTGCCACCACTAAA    CGTGCTGCGGGCTGCCA TTT CGATCGCCCGCAGCATG    GTCCTGCAGCTCAGT  76 36
APY29_RS14945 3334603 .. 3334624 -  -2.1   -4.0251   AGCAGCACAATCAAA           CCAGGGCGA CTTC TCACGCGGG            CCAATGCGCAGTGTC  57 17
APY29_RS14940 3333166 .. 3333190 -    -7  -3.20751   CGCAACAAGCGAACA          CAGCGCCAAC AGCAG GCAGGCGCCG          ACACCGAACCAGCGC  53 390
APY29_RS14935 NONE
APY29_RS14930 3328431 .. 3328455 -  -6.4  -2.78384   GCGCGGTCTACGACA          CCGAACAGAC CGCAC GCCTGTTCTG          CAAGATCGCCAACGC  47 306
APY29_RS14880 3318777 .. 3318804 - -13.4  -3.25652   TCTAGGCAACGAATA        GCAGTCCGCGGC GCAC GCCGCGAATTGC         AAAGACAAACAAATC  77 88
APY29_RS14875 NONE
APY29_RS14870 3316403 .. 3316451 - -16.9  -5.75342   TCGCGCCAAAAAAAA TCGTGACCGGATGATGCGTCG TTCGGCG CCATGCATCATCCGATCACGA TGGGGTCACCCGGCG 100 65
APY29_RS14850 3313502 .. 3313533 -   -26   -4.3467   ATCGCCAGACCAAAA      CGACAACGCCGGCC TGGT GGCCGGCGTTGTCG       CAGCAACATCGCGTG 100 44
APY29_RS14845 3312627 .. 3312637 -  -6.8  -3.07816   TCGGCACTCATGCAA                 CCTG CTC CAGG                 CGACGACGAAGATTG  51 7
APY29_RS14840 3311685 .. 3311699 - -11.4  -4.18934   CAGCACTGCAAGAAA               CTGCGC TCC GCGCAG               CGAACCCGCGTCCCC  84 76
APY29_RS14835 3310418 .. 3310468 -  -5.3  -4.83615   GAGCGGCTACAAAAA GACGCTGCCCAACCACCGCACCGGC GTG ACGGGCGCGG-GATC-GGCAGCTAC CCGCCAACACTCCGG  80 265
APY29_RS14825 NONE
APY29_RS14820 NONE
APY29_RS14815 3308106 .. 3308141 -  -2.4  -4.67904   GACCAATCCCAAAAA    GGTCAAGTGCGCCCAGT CTA ACCCGCCGCAC-CGGCC    GCGACACCGGCGCAA  72 66
APY29_RS14810 NONE
APY29_RS14805 NONE
APY29_RS14800 3304070 .. 3304089 -  -3.4  -3.06796   CGCCATCGGACGCAA            CCGACCCG AGCT CAGGCCGT             CAACCGCCAGGCGCG  43 17
APY29_RS14795 NONE
APY29_RS14790 3301797 .. 3301807 -  -2.4  -3.47713   GAAAAACGCCAAACA                 CCGC TTC GAGG                 CACTGGACCGCTTCG  46 184
APY29_RS14740 NONE
APY29_RS14735 NONE
APY29_RS14730 3290150 .. 3290160 -  -5.4  -3.10597   CGGGTGAGGGAAAAG                 TACG GGA CGTA                 ACAGCGACGCTTACG  47 36
APY29_RS14725 NONE
APY29_RS14720 3289232 .. 3289248 -  -4.3  -2.78384   CTGCCGCTCAGCACA              GCGAACG CAG CGATCAC              CAGAACAACAACCAA  43 166
APY29_RS14710 3288300 .. 3288333 -  -2.2  -4.10161   GAGCACGCTGGAAAA     TGCCGGCCCGCC CAATTCCGCC GGCGGGACGGGC      TGGGCCACTGCGCGT  57 118
APY29_RS14705 3287352 .. 3287373 -  -3.5  -5.61596   ACGGGCAGAAAAAAA           GGCGCGCGC GTCT GAGCGCAGC            TCATGGGCGAAAGAT  93 40
APY29_RS14700 3286150 .. 3286169 -  -2.8  -3.86897   GGGACCGGTTAGAAA            CGGA-GCAG GCT CTGCATGCG            CTAGCGTTGTACACG  56 160
APY29_RS14695 3285277 .. 3285308 -  -8.6  -3.11316   GGAGCAGCCAACAGA      GCGACTGCGCACCGC CAT GCGG-GCGCGATCGG      CACTCGGAATCGGCA  58 170
APY29_RS14685 3284542 .. 3284571 -  -9.3  -3.36878   GCTATGGACGTACAA       CCA-CGAGCGCC CGAATAT GGCGCTCGGCGG       CATCACGCCTGCCAT  63 59
APY29_RS14645 3279477 .. 3279489 -  -4.8  -3.14132   CGGCCGGTGGAGCAA                GGGT TCCCC ACCC                GGCATCGGGCAGGAA  48 300
APY29_RS14640 NONE
        rpsR 3278687 .. 3278707 - -15.5  -2.72991   TTATATTTTTAATTA            CCCGCACAT GTG ATGTGCGGG            CTCTTCCGAGGGACT  78 45
APY29_RS14630 3278041 .. 3278068 - -21.4  -5.00616   CGGCGCCCCAAAAAA        CGAAGGGCGCCT AACA AGGCGCCCTTCG         GGTGACACATATGGC 100 46
         smc 3274366 .. 3274381 -  -4.7  -3.17763   TCGATATTCCAGCAA              GCATG GCACGT CATGC               CGCACCCGCCAAACG  48 20
APY29_RS14620 NONE
APY29_RS14615 3273081 .. 3273097 -  -3.5  -3.86346   TTATGGGGGGAGAAA              GTGCCCC GTA GGGGCGG              ATGAGGGTGCGGGCG  56 126
APY29_RS14600 NONE
APY29_RS14595 3267201 .. 3267232 - -10.8  -2.72344   CCTCACCCCGAACGA      TCTTCGTCGCGCCC CCGT GGACGCGAAGATGA       GAGCATCATCGATGT  63 78
APY29_RS14590 NONE
        mtnA 3265060 .. 3265070 -  -2.4  -3.57144   CGGGCGAGCCGGAAA                 GCCG CGT CGGG                 ACCGCCCTTGCATCA  49 187
APY29_RS14575 3262272 .. 3262289 -  -9.1   -5.4505   TCGCGCAATAAAAAA             CGCCAGT TTTC ACCGGCG              TTTTTGGTCAACTGC 100 59
APY29_RS14570 3259411 .. 3259430 - -11.4  -4.65895   TTCTTCAGCGAAAAA            GCGCACCA CTTG CGGTGCGC             TTTTTCATGCTTCAA  95 223
APY29_RS14540 3251255 .. 3251265 -  -3.2  -2.74144   TCGGCAGGTGTAAAG                 CGTA CAC CACG                 ACTTCTGCGCGCCGT  40 84
APY29_RS14535 3250977 .. 3250989 -  -3.3  -3.05596   GATGCGCTGATGCAA                GGTGC CAG GCACG                ATGGTGGTGATGGCG  43 74
        hutC 3249837 .. 3249857 -  -4.7  -3.29144   GCAGCCGGCGCAGAA            CCGGATG CGGCCAC CATCCAG            GGCTATCAGCGCGAG  49 440
APY29_RS14510 3246545 .. 3246560 -  -3.2  -5.00616   CGCGTCTGGAAAAAA              CTCAGC GCGC GCCGAA               CCACAGCAAGGCGCT  79 11
APY29_RS14495 3243588 .. 3243638 -  -6.8  -4.11216   TGGGCATTCCTAAAA TGGCGGCGCATG-TGCGCTGGCAGC GCAT GC-GCCTGCGCGGCAGACGCCGC-A GGTAGATGAAGACTC  69 39
        pheA 3242319 .. 3242332 -  -4.5  -3.65812   TCGCCGTCAATACAA               GGCCGC GGC GCG-CC               GGCATGGGTTGTCGT  53 56
        aroA 3240442 .. 3240460 -   -11  -3.53012   CGCTGCCGGTGGAAA             GTCGGCAG ATC CTGCCAAC             GACCGATGGCCCGCG  70 483
APY29_RS14470 3237671 .. 3237690 - -13.6  -4.98531   GCCGTAAACGAAAAA            CGGGACCA GCGC TGGTCCCG             TTTTTTTTCGTCAAT 100 261
APY29_RS14460 3235790 .. 3235800 -  -6.8  -2.94218   ACGCCTGAGCACACA                 GGCA GCC TGCC                 GAACATTTGCGGCGA  50 131
APY29_RS14455 3235259 .. 3235269 -  -2.4  -3.53224   CAGGTCGCCCTGAAA                 GCGG TGG CAGC                 GATGCAGGCGCGGGC  47 202
APY29_RS14450 3234444 .. 3234454 -  -6.8  -3.58726   GCGTTCGATAGACAA                 GCGA CGG TCGC                 GGCGATCGTCTGGGC  59 60
APY29_RS14425 3226789 .. 3226804 -  -3.2  -3.53811   GCTACGCGGGCGAAA              TCGCCA AACG TGCCGA               CTTTCTGGATACCGG  49 223
APY29_RS14410 NONE
APY29_RS14405 3222723 .. 3222733 -  -3.2   -4.0641   CGTGAGGCAGACAAA                 TCGC CAC GCAA                 GAGCGAAAGCGAGCA  58 106
APY29_RS14340 3212858 .. 3212870 -  -3.3  -3.92178   ACTATGCGAACGAAA                TGGCG TGG CGCGA                GGACGTACGCCGTTT  58 155
APY29_RS14320 NONE
APY29_RS14315 NONE
APY29_RS14310 3206579 .. 3206591 -  -7.7  -3.10409   GAGCAAGCGACGCAA                GAGTC GGC GACTC                ATCGGGAGACACAGG  54 333
APY29_RS14300 3205737 .. 3205766 -  -9.3  -3.36878   GCTATGGACGTACAA       CCA-CGAGCGCC CGAATAT GGCGCTCGGCGG       CATCACGCCTGCCAT  63 100
APY29_RS14285 3202831 .. 3202855 -  -3.6   -3.5594   AATTGATCGTCGAAA         TGCTCTGCCGG TGAA CCAGCAGAA-A          TGCCGGCGAATTCAT  51 104
APY29_RS14280 3201167 .. 3201188 -  -2.9  -3.46509   GCTCAAGAACAGCAA           GTGGACCTGG ACC CC-GGCCCAG           CTCAAGACCTATCTA  48 127
APY29_RS14260 NONE
APY29_RS14255 3197440 .. 3197454 -  -4.2  -3.57615   CGAACACCGCTCAAA               GCTCCA CAT CGAAGC               TGGATCTGCCCGCCA  53 6
APY29_RS14250 3196489 .. 3196501 -  -3.3  -4.28774   TGACCTAACCGAAAA                CATGG CAG CCCTG                TAACGCAACCGGCAA  64 2
APY29_RS14245 NONE
APY29_RS14240 NONE
APY29_RS14235 3193187 .. 3193202 -  -3.2  -2.54325   CGTGCCGAAACACAC              GCCTGA TCGT TCATGC               CGCCCGTTCCAGATA  39 20
APY29_RS14230 3192244 .. 3192259 -  -4.6  -3.03124   CCGGACGGCGCAACA              GCGTGC TCAT GCAAGC               TCCGCCGCGCGCGCG  47 16
APY29_RS14225 3191105 .. 3191121 -  -7.9  -2.57881   CAACGGGGCGATAAG              GGGCGTG CTG CACGCTC              ACGCGGCAGACGGAT  51 24
APY29_RS14220 3190192 .. 3190249 -  -8.3  -3.27525   CTTGCGCAAACTCAA TCCCCCTGCATGCGCCGTTGC-CCACGG CAA CCGTCATGCACCAGCGTATGCAGGAGTC CGCGCGCGACGGCGC  60 1
APY29_RS14215 NONE
APY29_RS14210 NONE
APY29_RS14205 3187592 .. 3187613 -  -5.1  -3.72695   ACTGCGCTCACGAAA           GCGCTCGGTT GGC AGCC-AGCGC           ATGGGTCACCTGCGC  58 85
APY29_RS14200 3186801 .. 3186822 -  -5.7  -3.09878   GCGATCGACGCAACA           TCGCTGCCG TGTG CCGCTGCGA            CCGCAGCGTGCCACT  49 92
APY29_RS14195 NONE
APY29_RS14190 3184251 .. 3184266 -  -2.5  -3.85698   TGCCTTCGGCAGAAA              GC-CGC AAGGA GCGCGC              GGACATGTTGCAGAC  54 275
APY29_RS14175 3180422 .. 3180432 -  -6.8  -3.05844   CCCCTCATTGCAACA                 GCTG CAG CAGC                 GCATCCACCGAGGCC  51 4
APY29_RS14170 3178388 .. 3178407 -  -6.4  -3.79747   GTACGGATGATGAAA            CGCCTG CGGAAGGC CAGGCG             TGTAAGCCATCGTGC  62 214
APY29_RS14160 3175607 .. 3175623 -  -2.9  -2.71924   GATCGCTGCGCAAAG              CGACGTG AAT CACACCA              AGGTCACGTCCAGCT  40 18
APY29_RS14155 3174745 .. 3174758 -  -5.9  -3.53224   GATCGCCTGCTCAAA               CCGCG GTTG CACGG                CATGCTGGATGGAAT  56 322
APY29_RS14135 NONE
APY29_RS14130 NONE
APY29_RS14125 3169839 .. 3169896 -   -12  -2.85996   GACGATGTACGAAAC CCGCTGAGCACCAC-CATCGCCGGCCGC ACAC GCGGCGGGCGATGCATTACGC-CAGCCG CAACTAAATGCGCAA  67 243
APY29_RS14110 3165538 .. 3165558 - -19.7  -4.19735   TGTTCCAAAAGTAAA            CGCCCCGGC AAT GCCGGGGCG            TCGTTAAGATCCGGC 100 56
        pyrG 3163419 .. 3163464 -  -3.1  -2.50252   AGTGGGAGAAGACAG TCGCCATCTGAGCCCCTTTCCC ATC GGGAGAGGGG-TCGGGTGAGGG TTCGGTTGGCGAAGC  39 175
APY29_RS14100 3162311 .. 3162322 -  -3.6  -3.50853   TGGCGGTAAGCAGAA                CGGC CATC ACCG                 CCATGCACGCCCACG  49 134
APY29_RS14095 3162034 .. 3162049 -  -2.5  -3.57144   CGGTCCATTGCCAAA              TCGCA TGCAGC CGCGA               CACGCAGCACGTCGC  49 51
APY29_RS14090 NONE
APY29_RS14085 NONE
APY29_RS14080 NONE
APY29_RS14075 NONE
APY29_RS14070 3157328 .. 3157353 -  -6.9  -2.90075   CCTGCTGGAAGCACA         TGCGCACG-AAC ATG GCTGCGTACGCA         TCATCCACGGCAAGG  50 439
APY29_RS14060 NONE
APY29_RS14055 3155392 .. 3155402 -  -5.4   -3.3543   CAACGGCCCAAAAAT                 CTTC ATC GAAG                 GACTCTCATGGATTC  50 39
APY29_RS14050 NONE
APY29_RS14045 3153761 .. 3153773 -  -3.3   -3.2327   GGAAGCGATGACCAA                TGCCG CCG CCGCA                CGCACCTACAACGTG  46 259
APY29_RS14030 NONE
        hflB 3150380 .. 3150416 - -18.2  -3.31461   GATGTAGTCCGATAA   CGCATCAAGGCCGGGAA TCGC TCCCCGGCCTTGATG-G    ATGCCTCGCAGATCA  93 54
        folP NONE
APY29_RS14015 NONE
APY29_RS14010 NONE
APY29_RS14005 3146710 .. 3146741 - -13.8  -2.71011   ATTGGCCTTGAAGCA      GCAGCACGGTCTCGT CAT ACC-GACCGTGCTGC      GTTCTTCACGCTTCC  72 31
APY29_RS14000 3145657 .. 3145686 -    -5  -3.48924   GCATGTGCCAGATAA      CGCGTCCGCT-CAG CGTG CTGCAGCGG-CGTG       TCGACAACGAGCCAC  53 162
        ubiB 3143651 .. 3143662 -  -2.2  -2.80492   TATTACTACTAACGA                TCGC CTGC GCAA                 GTATTTCGCCGCGTC  39 75
APY29_RS13990 3142959 .. 3142975 -  -2.1  -3.85698   GCGGGCTCGGAGAAA              CGCCAGC ACG GCCATCG              GCACAGAGCTCAGCG  54 35
        recA 3141542 .. 3141588 - -10.3  -2.87132   CTGGCCTTCGATAGA TCTACCGCGAGAAGCGACAG CACTGACT CCGCCG-TCCTCGCGATAGA AAAACTTCAAACACA  59 215
APY29_RS13975 3140937 .. 3140960 -  -2.3  -3.66286   AGATGAGCGGAACAA          CCTGAAACC ACGAAG GGTAGCAGG           CCTGACGCCCTCAGT  49 36
APY29_RS13970 3138173 .. 3138197 -    -5  -4.06505   GGAATAGACCAGAAA         TGG-TAGCGGG ACAT CCTGCTAGCCA          GCAAGGCATAGCAGG  63 49
        csrA 3137866 .. 3137887 -  -4.5  -3.32294   GTAAACCCTTGACAA           CGATCAATTC GAG GAATCG-TCG           CCGTGATGTGCGCCG  48 7
APY29_RS13960 3137656 .. 3137682 -   -21  -5.40464   TAGCACAAATAAAAA         CGCCCGCAAATC AGT GATTTGCGGGCG         TTTAGAACACTGGCG 100 36
APY29_RS13955 3136734 .. 3136773 -   -12  -2.73542   GCGAAGCGGCAATGA  CGCCCGTCCTGAGTGCCA TTCA TGGCAGCCCGGGCAGGCG   AGCGAATGGGGTGTA  66 307
APY29_RS13950 3134272 .. 3134287 - -11.8  -4.56702   GCCGAAGCAAACAAA              GCCCGC GTAC GCGGGC               TTTGTCTTGTGCGCA 100 349
APY29_RS13940 NONE
APY29_RS13935 3130842 .. 3130895 - -13.9  -4.25104   TCGCCTGGATGAAAA CGCCTGCGGCCGTGGTC-GCTGCGC TGCGTC GCGCGCCTGACCACGACCGCAA-CG ACGCTGGAATTTCAT 100 509
APY29_RS13880 NONE
APY29_RS13875 3123455 .. 3123487 - -22.1  -3.15579   TCAACTCCGCACTAA      CGCAAAACGGGCGCC CAA GGCGCCCGTTTTGCT      ATCCAGCAAACCGCA 100 47
APY29_RS13840 3117849 .. 3117864 - -11.8   -5.1101   TGATCACGCAAAAAA              CGGGCG ATGT CGCCCG               TCAATTCCCTCCAGC 100 188
APY29_RS13835 3114740 .. 3114763 -  -2.3  -4.44461   AACAACCCCAGAAAA          CCCAGCAAC TCTGGC ATCGCAGGG           ACATGGCACTGATTT  65 99
APY29_RS13830 3111715 .. 3111756 - -20.9  -4.81551   CATCGATAGGAAAAA CACCGGCCCAACGAGCTGC CTGC ACAGCTCGCCGGACCGGCG  ACGCACTTCCTACGG 100 47
APY29_RS13825 3109382 .. 3109395 -  -9.5  -3.09785   GTACACGGTAAGACA               GCGCG ATGA CGCGC                GCAGCGAGGCCGCGC  60 41
APY29_RS13820 3107364 .. 3107382 -    -3  -2.66106   CAGGGGAAGAAGCGA             TCACGCGT GCA ACGGGGGA             ATGCATGGACATAAG  39 49
APY29_RS13815 3105572 .. 3105593 - -11.5  -3.84246   CTTTGAATGACGAAA           CGGTGCCGC GGGG GCGGCAGCG            CATGGGTAAGGCGAG  79 84
APY29_RS13810 NONE
APY29_RS13805 NONE
        xylB NONE
        xylA 3097246 .. 3097265 -  -9.2  -2.57067   GGAACATGCAAGGGA            GCGTCCAC GGGG GTGGCCGC             CATCGGCCGGCGACG  56 65
APY29_RS13790 3095734 .. 3095750 - -15.1  -5.55769   TTGCACAAGAAAAAA              GCCGCGC ACT GCGCGGC              CTTTTTCGTTTTCGA 100 67
APY29_RS13785 3093813 .. 3093826 -  -5.2  -3.38088   AAGCGATGCAACCAA               GCGC AACCAA GCGC                AACTTGTCTATAAGA  53 59
APY29_RS13770 3091622 .. 3091655 -  -5.1   -4.1891   CTCGTCGAAGATAAA     GGTGAC-GACCGCGCC TCA GGCGCGGCCAGGAAAC     GCAGCGAAGTAATCG  65 7
APY29_RS13765 3090204 .. 3090234 - -16.8  -4.13767   CGTCTCACTGCAAAA       CGCCAGAGCCCCGC ATT GCGGGGCTTTTGCG       TTGTAGCGCAGGCAT 100 473
APY29_RS13755 NONE
        folK NONE
        panB NONE
APY29_RS13740 3086459 .. 3086469 -  -2.4  -3.53811   CGCAGCGCGCGCAAA                 CGCG CGC CCCG                 GTCGCTGGCGCTGCC  49 69
APY29_RS13735 NONE
APY29_RS13730 3084410 .. 3084427 - -14.1  -5.07652   CCGTCCAAAACAAAA             CGGGGCC CGCA GGCCCCG              TTTTTTTCAAGCGCG 100 53
APY29_RS13725 3083944 .. 3083968 - -17.9  -2.57243   CCAGCACCAGAAGAT          GGCCCATCGCT TAC AGCGACGGGCC          CAGGGCGACCTTGCG  86 11
APY29_RS13720 3083314 .. 3083325 -  -7.2  -2.89981   GAGAATCAGATCAGA                CCGC ACGC GCGG                 CTCAAGACTGCCGCA  53 27
APY29_RS13715 3082368 .. 3082382 -  -7.1  -3.56099   CACAACCTGGCCAAA               GCCGA TGCGC TCGGC               AATCTGGCCGACCCG  58 444
APY29_RS13705 3077584 .. 3077605 -  -7.9  -2.66733   TCGCAACGCACAGCA           TGCGCCACG GCAA CGCGGCGAA            CCGCAGCTGCAGGCC  50 184
APY29_RS13695 3075892 .. 3075923 -   -18  -2.52676   CAGGCTGTCAACGCA      GCGCGGCACGACAC CAAG GTGCCACGCCGCGC       GGCGTTTCAAGACAT  86 47
APY29_RS13685 3073458 .. 3073469 -  -3.6  -4.49939   ATAGAAGTGACAAAA                CCGC GATG GCGA                 GATTCACAGCACGGG  67 190
APY29_RS13680 3072415 .. 3072433 -  -5.2  -4.07687   ATGCGTTTCGGAAAA             CTACAGGC GCC GACTGCAG             GACTTCAATCTCACA  63 36
APY29_RS13660 NONE
APY29_RS13655 3068097 .. 3068109 -  -2.6  -3.04144   GCTCGATTCCGAACA                CCGG TCACG CCAG                CCTGGCAGCTGTGCA  41 60
APY29_RS13650 NONE
APY29_RS13605 3060966 .. 3060976 -  -2.4   -3.9941   GCGGCGAGAAGGAAA                 CCGG CGG CGGG                 CGCGAGTCCGGCTCG  56 117
APY29_RS13595 3058876 .. 3058892 -  -2.1  -3.67597   GGCGCCACCGAACAA              CTCGGCA CCC TGCTGCG              GCATAGCCGCATCTC  51 471
APY29_RS13570 3050969 .. 3050990 -  -9.3    -4.258   TCATCCATCAACAAA           CGCGCAGCC GGCT GGCGACGCG            ATCCGTGTCAAAACT  83 33
APY29_RS13565 NONE
APY29_RS13560 NONE
APY29_RS13555 3037544 .. 3037558 -  -4.2  -3.14931   GCCACTTCGCATCAA               GCAACA GAT CGTCGC               TATCGCAACCCCGAA  47 70
APY29_RS13550 3037063 .. 3037092 - -10.6  -3.16971   GGATGAGAGAGGGAA       GCCCCCGCATCC TGATCC GGGTGCGGGGCC        GTTGTTTTCGGAAGT  64 204
APY29_RS13545 3034499 .. 3034519 -  -4.5  -3.21276   GCCTGGCTGACAACA            GCATGCGTC ACA GCCGCGCGC            CCTCGCCTGCCGCCA  47 12
APY29_RS13540 3033239 .. 3033290 -  -7.3  -3.87373   TACACCGTGGACAAA GGCATCAGCGGCGGCG-ACGCCGGCA GCC CGCCGGCGTTCATCGGCA-TG-TGCC ACATCTTTTGCGAGT  64 231
APY29_RS13530 3031548 .. 3031575 -  -7.6  -3.72231   TCAGACATGCAACAA        CCCACAGCGGACG CGG CG-CCACAGCGGG        GCCGCACCCCCTAGA  65 91
APY29_RS13525 3030385 .. 3030419 -  -8.6  -3.15544   CCGCACCTTCACCAA    GCTGCGGCAGCAGCA GTTGAT CGC-GCTACCGCAAC     TGCAGGTGGTGCAGA  56 403
APY29_RS13515 3028065 .. 3028094 - -17.3  -4.30576   TGCCCATTACGAAAA       CGCCCACTGACAT CCGG ATATCAGTGGGCG        CGTTCTGCGCGACGG 100 98
APY29_RS13510 NONE
APY29_RS13505 NONE
        hisD NONE
APY29_RS13495 NONE
APY29_RS13490 NONE
        hisH NONE
        hisA NONE
APY29_RS13475 NONE
APY29_RS13470 3020452 .. 3020464 -  -4.7  -3.35679   GGGCGTTACCGATAA                CGCGC CGC GCCCG                GGTGCGCTCCTACGC  50 48
APY29_RS13465 3018444 .. 3018462 - -11.7  -3.05844   GCCCGGATCCCAACA             CGCCTCC CTTGT GGAGGCG             TTTGTGTTGGTGGCG  68 307
APY29_RS13430 3010812 .. 3010833 -  -4.3  -3.28219   AAGCGCAGGACAACA           TCGGCATCG AGGT CGCCGCCAA            ACTGGTGCGCTATAG  49 486
APY29_RS13420 NONE
APY29_RS13415 NONE
APY29_RS13410 3005972 .. 3005982 -  -8.2  -2.52623   TCGCCGCGAGAAGAT                 GGCG CGC CGCC                 CCCTCAATGAGGGCG  53 125
APY29_RS13375 NONE
APY29_RS13370 NONE
APY29_RS13365 2999228 .. 2999240 -  -4.8  -2.62983   CGCACGTGTAGACCA                GACG ACGGG CGTC                AATGGCTGCGGGGCG  43 24
APY29_RS13360 2998542 .. 2998563 -    -5  -3.61178   GGCACGCAGTCCAAA           GGCCGGCA GCACGT CGCCCGCC            ATCACCAGGCAACCG  55 139
APY29_RS13355 NONE
APY29_RS13350 2996413 .. 2996446 -  -4.4  -2.53876   GGCTATCGCAACGTA     GCGCGCAGTCGTCA TGCAGG CGCGGACTGCGCGG      CGCAAGCGCGTGCAC  41 111
APY29_RS13345 2995234 .. 2995266 - -10.6  -3.72576   TCCGGTTGCAGCAAA     GCG-CGGACGCGGTGC TGG GGACCG-GTCCGACGC     TGGTTCGGGCAAGCG  74 166
APY29_RS13340 NONE
APY29_RS13335 NONE
        carB NONE
APY29_RS13325 NONE
APY29_RS13320 NONE
        recJ 2987041 .. 2987065 -  -4.2   -3.5399   ACCAGACCGACACAA         CCGACCGTGCT CCCC AGCGCGG-CAG          CCATCGGGAGCTTCT  53 118
APY29_RS13310 NONE
APY29_RS13305 NONE
APY29_RS13300 2979515 .. 2979525 -  -3.2  -3.28712   GTCCTGGCCGTAGAA                 GGAC AGG ATCC                 GGCTGCCACCGGCCG  46 376
APY29_RS13295 NONE
APY29_RS13290 2978349 .. 2978359 -  -5.4  -3.05384   CCTTGGGGTAGGGAA                 TTGG ACT CCAA                 ACTGAGGTGCTACTC  47 63
APY29_RS13285 2977156 .. 2977171 -  -4.6  -3.69354   CGCTACAAGGCGAAA              CCGCCA TCCC TGCCGG               CCCTATTCGTCCCTG  58 76
APY29_RS13280 2975962 .. 2975980 -    -3  -3.90922   ACTTCCGGCAAACAA             GCGGGCTA GTT TAGCAAGC             GGGCGGCGGCGGAAC  56 229
APY29_RS13275 2974664 .. 2974676 - -10.5  -3.27298   GTGGGGAATGAGGAA                CCGGC GGT GCCGG                CACGCTTATTAGAAC  66 165
        lysS 2973094 .. 2973106 -  -3.3  -5.60993   GCCGGCACAAAAAAA                TCAGG CTT CCGGA                CGCATGTACGGGAAC  93 13
APY29_RS13265 NONE
APY29_RS13260 2969530 .. 2969544 -    -7   -4.4715   GGTCAAGGCACAAAA               TCGCCG AGC CGGCGC               AAGCGTTGCCTGATT  76 94
APY29_RS13245 2965918 .. 2965956 - -16.1  -2.71011   ATCGCGCTCCAACGA  TGCAACG-CACTCCCGCC GCTC GGCGGGAGCGGCGTTTCA   GGCCTTGTGAAACCG  81 344
APY29_RS13235 NONE
APY29_RS13230 NONE
APY29_RS13225 2959622 .. 2959650 - -23.3  -4.37886   CCATTGCCTAGAAAA        CGAAATGCCCGGC AGT GCCGGGCATTTCG        GAACGACCAACCTGC 100 49
APY29_RS13220 2958518 .. 2958530 -  -9.1  -3.44848   CTTCCCTACGAAAGA                GGGCT TTA AGCCC                CTCTCCCCGCGGGAG  65 130
APY29_RS13170 2947784 .. 2947840 -  -4.4  -3.78022   CCCAGATGGACGAAA CCACCCAGCAGAACGCCGCGCTGGTGG AAGAAG CCACC-GC-CGCCGCAC-GCTCGATGG AAGACCAGGCCGCGC  58 183
APY29_RS13055 2909010 .. 2909023 -  -2.3  -3.80452   AAATCACACCAACAA               CGTGC CGAG GCACC                AGCGTGGCCGGGGAT  52 243
APY29_RS13050 2905071 .. 2905111 -   -17  -2.71712   CGGCCGTCGCCAAAC CATCGCGCCCATA-CCGCC ACAC GGCAGATATGGGCGCAACG  CGCTGCCGCCTAGAA  84 35
APY29_RS13045 NONE
APY29_RS13040 NONE
APY29_RS13035 2902330 .. 2902340 -  -2.4  -3.66643   CAAACCAAACCAGAA                 CGCC TAC GTCG                 AATCGTTCAACGGCC  51 262
APY29_RS13025 NONE
APY29_RS13020 NONE
APY29_RS13015 2898888 .. 2898932 -  -2.8  -2.83822   CTCAGGCGACAACTA CCTTGACCTGCGCCG-GCAGA TCAG TCTGCGCGAGGCAGGAGAAAA TCATTCTTCGCCAGA  42 1
APY29_RS13010 2897127 .. 2897169 - -14.1  -3.01712   GCCCGCGGTGCAACA CCCGATCCATGGGC-GGCGC GGCC GCGCCAGGCCATGGGTCGGC AGTGCGGACGGGCGG  72 233
APY29_RS12995 2895742 .. 2895752 -  -2.4  -3.66643   CAAACCAAACCAGAA                 CGCC TAC GTCG                 AATCGTTCAACGGCC  51 360
APY29_RS12980 2893047 .. 2893068 -  -4.3  -2.87564   GGATGGGGGGAGACA           TCGCCGGCA GCAA TCCCGCCGA            CAGTCGATCTACGCA  44 131
APY29_RS12975 2892363 .. 2892373 -  -2.4  -3.53811   TGCAGGCCGGCGAAA                 CCCG CTT CGGC                 CTGGTGGTGGACCAG  49 98
APY29_RS12830 2856309 .. 2856338 -  -9.3  -3.36878   GCTATGGACGTACAA       CCA-CGAGCGCC CGAATAT GGCGCTCGGCGG       CATCACGCCTGCCAT  63 96
APY29_RS12695 2831843 .. 2831863 -  -6.7  -3.04144   GGCTGATGCGCAACA            CCAGCACCG ACC CGGCACAGG            CGTTTGCGGTGGCCA  51 207
APY29_RS12660 NONE
APY29_RS12655 2826044 .. 2826090 -  -3.1  -3.32844   GGTCGTAGGGGATAA CGGCACCCAGAAAAAAAACTT TATAG AAATTTTTTACCTGGAGACCA CAACGGTTCCGCTCG  46 12
        flgM NONE
APY29_RS12645 NONE
APY29_RS12640 2823476 .. 2823488 -  -4.7  -4.73613   GGACGACGAAGAAAA                CGTGC TGC GCTCG                CTGGTGCGCCTGTTC  79 495
APY29_RS12625 2816872 .. 2816893 -  -5.1  -3.86346   TGATGCCGCCACAAA           CCATGTGTGG ACG CC-CTCATGG           TTTGCCCCGTCGCTG  60 198
APY29_RS12595 2811535 .. 2811547 -  -6.3  -2.57931   GGGATTTTCCACAAC                CCTAT CGG ATAGG                CATGTTCAGACAGCG  48 96
        clpA 2809145 .. 2809162 - -12.7  -4.87318   CTGAAAACGTAAAAA             GCCGCTC TCTC GAGCGGC              TTTTCTTACCTGCCA 100 56
APY29_RS12565 2802804 .. 2802831 -  -9.7  -2.79312   AAACGCGTCACGACA        TCGCCGGCGCC TACTTG GGCGGCGGCGG         TGCCAGCACGGTACG  57 8
APY29_RS12560 2800679 .. 2800696 -  -2.6  -2.59177   ACTTCATAGATGAAT             GGGCGA GCGCTA TCGCAC              GACGTGTTCAGATGG  38 64
APY29_RS12555 2799770 .. 2799788 -  -3.1  -3.76413   CGCGAAAAGGGCAAA            CGCCA-GC GCGA GCGTGGCA             TCGATTTCTTCATCA  56 236
APY29_RS12545 2794014 .. 2794039 - -11.1  -2.87211   ATGCCGGGGCACAGA         CCTG-CCGCCCC GGC GGGGTGGGCAGG         CATCATCAGCGCGCG  64 85
APY29_RS12540 NONE
APY29_RS12535 2793312 .. 2793331 -   -15  -4.07687   ATGCTGTCGCCAAAA            GGGCGTGC GCAA GCACGCCC             TTTGCTCTGCCGGTC  93 39
APY29_RS12515 NONE
        rlmN 2786936 .. 2786947 -  -3.6  -3.14344   CACGGCCGCCATTAA                CGCG AGTT CACG                 CTGCCGCATCTCGAT  44 21
APY29_RS12505 NONE
APY29_RS12500 2785275 .. 2785309 -  -5.8  -5.04601   GGGATAAATGAAAAA    CCGCAGT-CC-GCTTC ACTCG GAAGCAGGTACCACGG    AGCCGTCGGAGGATA  85 3
APY29_RS12495 2784584 .. 2784594 -  -2.4  -2.83403   CCTGCTTCATCAAAT                 CTGC TCC GCCG                 GATCGGGCACCTTGC  40 9
        bamB NONE
         der 2781841 .. 2781855 -   -10  -3.52906   GGACGCTCAGAAAGA               TGCACG GAA CGTGCA               AATCCCGGGCTCTAA  68 123
APY29_RS12480 2780419 .. 2780429 -  -3.2  -3.96298   TATCGATCAAGCAAA                 CGCT CAC AACG                 CGTACGGAATCACCC  56 18
APY29_RS12465 NONE
APY29_RS12460 NONE
APY29_RS12455 NONE
APY29_RS12450 2774363 .. 2774375 -  -5.5  -3.24032   ATCGGGTAACGAAGA                TCCCG TTC CGGAA                GGACGTAATCGCTTG  51 171
APY29_RS12445 NONE
APY29_RS12440 NONE
APY29_RS12435 2771668 .. 2771695 - -15.6  -3.23393   CTTGAGCCCAGAAGA        GGCCCTGCTGCA CACG TGCAGCAGGGTC         AGACGTGGTGCACGT  83 182
APY29_RS12415 NONE
APY29_RS12410 NONE
APY29_RS12400 NONE
APY29_RS12395 2765822 .. 2765833 -  -2.2  -4.14392   CTTGAATTGGGAAAA                CGTC AATA AACG                 CATCCTTCCCCAACT  58 379
APY29_RS12370 2762980 .. 2762992 -  -4.1  -3.70149   CGCAGATGACGCAAA                TAGTC ATG GACCA                TAAAGGCGAGAACGA  56 154
APY29_RS12365 2762338 .. 2762348 -  -2.4  -3.42699   AGCGACCTATGAGAA                 GCTG ATG CCGC                 TGCTTTACCCCGACC  46 182
APY29_RS12350 2760578 .. 2760593 -  -4.6  -3.71848   GGTGGCCACCAACAA              CAGAGC AGAA GCTCAG               CATGGGCACACACTG  58 47
APY29_RS12345 2760089 .. 2760101 -  -5.5  -2.74488   CAATCATCTGAATGA                CTACG TGG CGCAG                ACCTTGGCAAAGGGC  46 179
APY29_RS12335 2756704 .. 2756717 -  -3.7  -3.32343   GCTATAGCGGCAGAA               CGTCG CAGG CGCCG                GAGTTCGGCGAGTGG  47 292
APY29_RS12310 NONE
APY29_RS12305 2751635 .. 2751655 - -11.1  -4.75372   AGCAGGCAGCAAAAA            GGCCGGG TCACAAG CCCGGCC            TTTTTGCTTTGTTAC 100 54
APY29_RS12295 2747907 .. 2747921 -  -2.8  -2.80622   ATATACCGTAGGATA               TGCCAA TGT TTGGTA               TATATCAAGGCGTAT  40 68
APY29_RS12290 NONE
APY29_RS12285 NONE
APY29_RS12280 NONE
APY29_RS12275 2745545 .. 2745562 - -12.7  -3.19018   AACATTGGAATTTAA             TCCCGGC TCCG GCCGGGA              TTTTTTATTGGGCGC  73 188
APY29_RS12270 NONE
APY29_RS12265 NONE
APY29_RS12260 2743561 .. 2743571 -    -4  -3.61517   ATTTTTCGCGAATAA                 TTCT TGC AGAA                 ACAATGGGTTAGGAA  53 85
APY29_RS12245 2737661 .. 2737674 -  -2.4  -4.15222   ACCCGCGGGAACAAA               GATC CGCTAC GATC                TTTTATTGAATTACC  59 416
APY29_RS12240 2736825 .. 2736843 -  -7.3  -3.39327   GCGCGAGACCCAGAA             CGCGGCG CTGAC CGCCGAG             ATCGCCCGTCTCAAG  58 272
APY29_RS12225 NONE
APY29_RS12220 2733913 .. 2733925 -  -6.3  -2.54566   AATAGCTCACAAGAT                TGGAT TTC ATCCA                TTGCATCAGTGAGTT  48 153
APY29_RS12215 2733367 .. 2733389 - -12.6  -2.83271   CCAGTTCTACAACCA           CCGGCGCCCG CAC CAGGCGCTGG           GTATGAAGACACCGG  66 94
APY29_RS12200 2731838 .. 2731867 -  -4.9  -3.33492   GCAGTGACTGTAGAA       GCAAGTCTGGCGGG GAG CGCGCC-GATTCGC       TCCGCCTCACCGAAA  50 103
APY29_RS12195 2730382 .. 2730423 - -12.9  -3.39844   GCCATATGGCAAATA GCGCATCCCCCCATCTCCG ATGC CGGGGATGGGGGGATTACC  ATCCACTGCCTTCAT  76 337
APY29_RS12180 2725745 .. 2725761 -    -3  -3.24747   GGCCGAGACCATCAA             CGG-CTT GTAT AAGACCG              AACTGATCCACCGCC  46 266
APY29_RS12170 2723514 .. 2723564 - -11.9  -4.13945   AGTTGGAGGGTAAAA CGCCCGCGTACCAGTAT-CGGG-GG CGG CCTCCCGGATCCTGGTACGCCCACG GCTGCCGACCTGGCA  82 229
         xth 2718716 .. 2718731 -  -3.2  -2.78596   GACCCGGCTAGGATA              CCG-GCC CCT GGCGCAG              CAGGTACAGGCGTGG  40 482
APY29_RS12145 2717388 .. 2717400 -  -3.3  -3.06302   AGCAGCGTCATGCAA                CAGCC CCA GGATG                GATGGCACGCACAGG  43 46
APY29_RS12140 NONE
APY29_RS12135 2716388 .. 2716405 -  -8.3  -3.14211   ACGGCTCGCGAGCAA             CGCTCGG CGCG CCGTGCG              CTGCTGCCGGCGCGT  58 88
APY29_RS12125 2714587 .. 2714605 -  -8.1  -3.05816   GCATGCGCCAGCCAA            CGCGGCGC ATCG GC-CCGCG             GCGCAGGTCGCGGTA  57 155
APY29_RS12120 2713428 .. 2713440 -  -6.9  -2.89564   CGGGCAGCTCAGACA                GCGGC GCA GCCAC                AGGTCGAAACAGGCG  50 333
APY29_RS12115 2712604 .. 2712645 - -10.2  -4.72272   TGCTTCGACCAAAAA CAG-CACAGGCGCT-CGGCC GCAA GGGCGTAGCGCCTGTGTCCA ACCTCCGGCAAGATT 100 81
APY29_RS12105 2711502 .. 2711520 - -17.4  -4.93968   ACGCAGAAGCAAAAA             GGCCCCGC ACT GCGGGGCC             GATGAAACCTGCGCA 100 49
APY29_RS12100 NONE
APY29_RS12095 2710215 .. 2710257 -  -4.6  -3.07816   TCGCCATGCAGGCAA CGCGCCAGTCCGTGCTGCG ACGATG CGCGGC-CGTGCAGACGCG TCGCATCATGCGACG  47 139
APY29_RS12090 2709269 .. 2709302 - -15.9  -3.26298   ATTACGTCAAACAGA     CCGCGGCGCTGCGGC GCCT GCCGTAAAGCCGCGG      CGGCGCGCGGAGCCT  84 143
APY29_RS12080 2696485 .. 2696503 - -17.4  -5.47821   ATGCAGGCAAAAAAA             CGCCCCGG CAT CCGGGGCG             TTTTTCTCATTTCCA 100 67
APY29_RS12045 2686574 .. 2686595 -  -2.8  -3.54424   CGGCACGCGCGGAAA           TCGGCCTG ATGCCG CGGGCCGG            GTTGTCGCCGTTCGT  49 406
APY29_RS12035 NONE
APY29_RS12030 NONE
APY29_RS12025 2680819 .. 2680840 -  -2.1  -3.97636   AGGGCAACTGACAAA           CCAGTGCAC AGCT GTCCTCCGG            CGTAACCGGTGCCCG  57 145
APY29_RS12010 NONE
APY29_RS12005 2677232 .. 2677290 -  -8.2   -2.5194   GAAGCAGCGACCAAG GTTACCGACTGCAGGGACGATCCCGGAGC GTGC ACACCGGGATCGTCCCTGCA--CGGCTG- GTCCCGCCTACTGCG  53 33
APY29_RS12000 2675555 .. 2675569 -  -4.2  -3.26318   CGGTGAAGAAGAAAT               TGCAGG AGG CCTGTA               CATCGCGTAATGGCA  47 476
APY29_RS11980 2672807 .. 2672828 -  -3.5  -3.65812   CGCGCGGCAATACAA           CGCGCCAGG TGGA CGAGGCGCA            GTGGTGAAGCCGGCG  54 286
APY29_RS11960 NONE
APY29_RS11955 2671396 .. 2671407 -  -2.2  -2.81464   CCATCAGCCATGAGA                GTAG AACT CCAC                 AGCAGCGGCTTCACA  39 2
APY29_RS11950 NONE
APY29_RS11945 NONE
APY29_RS11940 NONE
APY29_RS11935 NONE
APY29_RS11930 2669540 .. 2669565 -  -8.9  -4.42062   TACCCCTGAAAGAAA         GAGGGCGACAC CGAA GCGCCGCCCTG          CCCTCACCACCATTA  84 38
APY29_RS11915 NONE
APY29_RS11910 NONE
APY29_RS11905 2665445 .. 2665460 -  -7.6  -2.62396   GATGCGCCTATATTA              TCGTGA CGCA TCACGA               AAGTCTAATGATGAT  51 64
APY29_RS11900 2664945 .. 2664957 -  -5.5   -3.4252   GTGTATCCAGCACAA                GCGAT TCC ACCGC                CTATCAAACGGATGG  53 201
APY29_RS11880 2663418 .. 2663435 -  -4.1  -3.07113   CAGCAGGGCAGGCAA             CTTCGAG CCCG CTGGAAG              TGGTCGCTGACGCAA  45 73
APY29_RS11875 2662766 .. 2662779 -  -8.1    -3.794   CTCCAACTGAGCAAA               CGCGA TCAA TCGCG                TGTTGTCCCGGCTTG  69 44
APY29_RS11860 NONE
APY29_RS11855 2659091 .. 2659108 -  -3.3   -4.4261   TGTTGAAGACGAAAA             GTAGCGC ATCT GCGCCAG              CGTCACCCAGGCGCG  67 138
APY29_RS11850 2658047 .. 2658063 -    -8  -3.24924   TCGTCATCGACAAGA              CAGCGA TGGTG TCGCTG              AAGACGGCTGTCAGC  56 99
APY29_RS11845 2655829 .. 2655839 -  -2.4  -3.57674   AGGGGACGATAAATA                 CGGC GAG GCGG                 ACGTCAACAAGCGCC  48 216
APY29_RS11835 2650860 .. 2650879 - -11.4  -5.60993   TGGCGCATAAAAAAA            CAGCGGCC CGAA GACCGCTG             TTTTCGATGTTGACA 100 85
APY29_RS11815 2647829 .. 2647840 -  -3.6  -3.08464   TCATCAGGCACTCAA                CGCG GCTG CACG                 CCCAGCAATTCCACA  43 10
APY29_RS11810 2646463 .. 2646474 -  -2.2  -3.04144   GGCGCACGCGCAATA                TCGC GACT ACGA                 CGTGGAGCGGATCGC  41 103
APY29_RS11800 NONE
APY29_RS11795 2643737 .. 2643751 -  -4.2  -3.29144   GGATGCGGCGGACAA               CCGTAC CCA GCACGA               GAAGCAGGCTGCAGG  47 412
APY29_RS11785 2632867 .. 2632889 -  -7.1   -3.2794   TCCGATCTACAGCAA          CTGCATCAAC GGTC GTTGATGC-G           TGTGCAAGAGCCAGC  55 485
APY29_RS11780 2631657 .. 2631672 - -10.4  -2.77895   CCCAGTGCGAACAAT              CGCCGA GCCA TCGGCG               TTCTTGGTCGAACTG  60 19
APY29_RS11765 2627291 .. 2627301 -  -6.8  -3.78329   GTGGATGAAGCGAAA                 GCAG TTA CTGC                 CTGCTATGGGGAGCG  64 208
APY29_RS11755 2626126 .. 2626151 -  -6.7  -3.17392   GATTCCGCAAGTGAA         GCGTTCGCCCA AAGG TGGACGGCCGC          GTATCATTGGTGAGC  52 56
APY29_RS11695 2607631 .. 2607654 -  -3.8  -3.14931   GCGACCGCGCAGGAA          CTCTGCGTCCA CAT TGG-CGCGAAG          GCGAGGGCACTGCTC  45 100
APY29_RS11685 NONE
APY29_RS11680 NONE
APY29_RS11675 NONE
APY29_RS11670 NONE
APY29_RS11665 NONE
APY29_RS11660 2601618 .. 2601628 -  -2.4  -2.95234   TCAACAAAGCGAAAT                 TGGC CAA GCCC                 TGGTTTAAGTTGTGG  40 260
APY29_RS11655 NONE
APY29_RS11650 2600210 .. 2600230 -  -3.8  -3.34398   GTGGTGGTTGAAATA            CCCGTGCC TCATC GGCCCCGG            GCGCGTGTGGGGATG  48 51
APY29_RS11645 2599543 .. 2599557 -  -2.7  -4.03141   AGCAGCAGCAAACAA               GCCGC ATGCG GTGGC               GACCACTTTCACGGG  57 210
APY29_RS11640 2597197 .. 2597243 - -18.9   -3.6502   TACCGCTGACCGAAA GGGGTCTCCCGATGGCTTGC GTGGGCGA GCAAGCCATCGGG-GACCCT TCGCGATAGGCGGAA 100 232
APY29_RS11635 2595328 .. 2595342 -  -2.1  -5.14563   GCTCGTAGCAAAAAA              GCT-CC TGTA GGTAGC               GGTGGATACTATTGC  81 34
APY29_RS11625 NONE
APY29_RS11620 2593757 .. 2593794 - -13.5  -2.70525   CTCCTTGAAATGAAG   CGAGGAACAC-CGGCCCT GAC AGGGACATGTGTCCCTCG   TGAGGTGAGTGAAAG  72 65
APY29_RS11615 2592122 .. 2592134 -  -3.3  -4.19817   TCCATTGATTGAAAA                GGGGA GAC TTCCC                GCCGGGGTGGCGAGA  61 74
APY29_RS11610 2591700 .. 2591717 - -10.5  -3.61652   CGTCCAAACAAGGAA             GCCCCCC GGGA AGGGGGC              TATTGGAGGAGAGGC  70 45
APY29_RS11605 2590975 .. 2590987 -  -5.5   -3.7791   GAATTACTCACTAAA                CGCAG GAC CTACG                CTGTCCATGCAGATC  60 115
APY29_RS11595 NONE
APY29_RS11590 NONE
APY29_RS11585 2586460 .. 2586475 - -10.4    -5.252   GACGGCCAGAAAAAA              GCCCCT CGAA AGGGGC               TGGTGGTGGGCAGGC 100 41
APY29_RS11580 2585253 .. 2585280 - -15.6  -4.60797   GTCGGATAGATAAAA        GGCCCTCCACCC GAAT GGATGGAGAGCC         TGTGGGGCACATGGA 100 110
APY29_RS11575 2584738 .. 2584763 - -12.7   -4.7878   CATTCAGAAAAGAAA         GGCCCTT-ACTC AAT GAGTGAAGGGCC         TTTTTTCTTCTGGAA 100 130
APY29_RS11560 2582993 .. 2583016 -  -3.8  -3.10409   CACCAAGCCACGCAA          GCGGGG AAGGGTGCGTAA CCCCGC           GATGGGTTGATAAGG  45 10
APY29_RS11555 2581989 .. 2582017 -  -7.2  -4.85267   AGAAACTAGGAAAAA        GCGGCAAGGCCC GTGAG GGGCCAAGCCGG        ATCAGAACGAAGCAA  88 27
APY29_RS11550 2581205 .. 2581219 -  -5.6  -5.52384   CCTCCAGGAAAAAAA               CCGGGA GCC TCCCCG               CATGGGGAAGTAACC 100 84
APY29_RS11545 2580765 .. 2580797 - -19.1  -2.76046   TGAACGGGAACAGCA      CCGCCCGTGGGGCAG GTA CTGCCCCACGGGGTG      GAAGAAAGTCGCTCA  87 90
APY29_RS11540 2580056 .. 2580071 -  -4.6  -3.14136   GGATGAATGACGGAA              CCACGC CAAG GCGTGC               TCCACGGGTGGGTCA  48 38
APY29_RS11535 NONE
APY29_RS11530 2578474 .. 2578511 -  -3.9  -2.75708   CTCCTTGAAAAAACT   TTGAGCCACGCCCCCCC TGGC GGAGTGAAGTGGCTCCG    TCAGGTGGACGGGAT  42 56
APY29_RS11525 2578024 .. 2578064 - -12.6  -5.60993   TGCTCCACAAAAAAA TGGGGCATG-CACCACCCC CAGC GGGGCAATGGCATGCCCCG  GGTGGGAAGATCAAT 100 114
APY29_RS11520 2575695 .. 2575710 - -11.8  -6.06723   CGGTTCAAAAAAAAA              CGGCCC CGAA GGGCCG               TAAGTGGAGATAGTC 100 39
APY29_RS11515 NONE
APY29_RS11510 2574353 .. 2574363 -  -2.4  -3.05384   CTCTGCGTCAGGGAA                 TCGC TAG GCGG                 CGGGTCTGCTCGCCC  41 7
APY29_RS11505 NONE
APY29_RS11500 NONE
APY29_RS11495 NONE
        traD NONE
APY29_RS11485 2569470 .. 2569494 -  -2.8  -3.14132   CTGTGTGTTCAGCAA          TGGCTTGATC GTGGA GATCAAGGCG          ACTTCAGGCCGCAAA  44 74
APY29_RS11480 NONE
APY29_RS11475 NONE
APY29_RS11470 2568466 .. 2568476 -  -2.4  -2.62396   CAGCCCCTTACAGGA                 TGCC GGT GGCT                 TCGGTGAGCAGCCAG  38 7
APY29_RS11465 2568033 .. 2568049 -  -2.1  -3.53091   ATCTCGTTCTTGAAA              CGGCTCA TCG TGCGCCC              CTTTGCATGGACCGG  47 13
APY29_RS11460 NONE
APY29_RS11455 NONE
APY29_RS11450 NONE
APY29_RS11445 NONE
APY29_RS11440 NONE
APY29_RS11435 2560579 .. 2560589 -  -5.4  -3.57144   TGGCGCATGCGCAAA                 TTCC CCC GGAA                 GAAGTATTGCGTTAT  54 378
APY29_RS11410 NONE
APY29_RS11405 NONE
APY29_RS11400 NONE
APY29_RS11395 NONE
APY29_RS11390 2553196 .. 2553217 -  -2.9  -5.63517   GCCGCAAAGAAAAAA           CGGGGTC-CG AAG CGAGACCCAA           TTCTATAAATAACAA  93 45
APY29_RS11385 NONE
APY29_RS11380 2551688 .. 2551700 -  -5.5  -3.75629   TATCCTCAATCGAAA                TCGAC GCT GCCGA                GGAACACCTGGCCCC  60 3
APY29_RS11375 NONE
APY29_RS11370 NONE
APY29_RS11365 2548052 .. 2548062 -  -2.4  -3.34222   ATCAGTACCGCAGAA                 CGTC TCG GCCG                 CAGCGTTGGCCGTGG  44 359
APY29_RS11345 2544929 .. 2544976 -  -8.3  -3.50853   CTGGTTCAACCACAA GCGCCTGCTTGGCCCGATCGG CGACAT CCCACCGGCCGAAGCAGAAGC GAACTACTATCAGCA  62 259
APY29_RS11335 2543159 .. 2543188 -  -9.3  -3.36878   GCTATGGACGTACAA       CCA-CGAGCGCC CGAATAT GGCGCTCGGCGG       CATCACGCCTGCCAT  63 99
APY29_RS11275 2531700 .. 2531710 -  -6.8  -3.36785   CCACAGCGTAAGTAA                 GCGT TAG ACGC                 GATGGTCAACGCACT  56 311
APY29_RS11265 NONE
APY29_RS11260 2526699 .. 2526711 -  -4.9  -3.07994   GTCAAGTCCATGCAA                TTACT CAC AGTAA                AGCGAAAAGTCCACC  47 65
APY29_RS11255 NONE
APY29_RS11250 NONE
APY29_RS11245 2521705 .. 2521717 -  -3.3  -3.68351   TCCGTACTATTGAAA                CCAGA AAA TCAGG                TGGCTATGCTTTCAA  54 120
APY29_RS11240 NONE
APY29_RS11235 2519563 .. 2519598 -    -9  -3.17194   AGCCTCGCAAGGTAA    TCCCCCCACTTCTAGC GGTC GCCAGAAGTGGAGCTA     AGCGGCCATCGCCAA  61 23
APY29_RS11230 2519000 .. 2519012 -  -3.3  -4.00526   AAGCGCACAATGAAA                CCAGG ACG CCCAG                TGGGCGCCACCACCT  58 313
APY29_RS11220 2517833 .. 2517883 - -11.1  -2.52543   AGCCTGGGTAATCGA GGGCAGCGTGTTCCCGATTGGCA ACTGG TGCCACTCAAGCACAAGCTGACC CAGGTCCTCATGAAT  59 368
APY29_RS11145 2502063 .. 2502107 -  -9.3  -3.17392   GATGCTGGAACTCAA CCGCGCCCA-GCG-CACCAGC CTGGT ACTGGTGACGCACGACCGCGG CTTGGCACGGCGCCT  59 312
APY29_RS11090 2494560 .. 2494570 -  -4.6  -3.55444   GGCCGACTGGTCAAA                 CAGC GAC GCCG                 CCAGACGGGCACGGC  55 131
         zwf NONE
APY29_RS11075 NONE
         pgl 2489845 .. 2489866 - -10.1  -2.71712   GCGTTTTTCTTAAAT           CCCCGCACA AGGA TGTGCGGGC            TCTTGCGAGGGACTC  60 45
APY29_RS11065 NONE
APY29_RS11060 2486698 .. 2486710 -  -6.2  -3.13164   TCTTGAACGAGGTAA                GGCG TTAAG CGCC                TCTCCCCCTGGGAGA  51 483
APY29_RS11045 2484227 .. 2484237 -  -6.8  -3.16564   CTTCGATGCGAGCAA                 GGTC AAG GACC                 TGCCGTCGCTGCTGG  52 500
APY29_RS11025 NONE
APY29_RS11020 2476675 .. 2476688 -  -3.8  -2.72344   TTTCATTCCGAATGA               GACG GTGTGG CGTC                GCCTCAGACTCAGTT  42 35
APY29_RS11015 NONE
APY29_RS11010 2476379 .. 2476397 - -17.4  -5.50499   TGACAGGCAAAAAAA             GCCCCGGC AGT GCCGGGGC             TTTCAGATGATTGGC 100 37
APY29_RS11000 NONE
APY29_RS10995 2475424 .. 2475440 - -15.1  -5.49234   ACAGGCAAGAAAAAA              CCCCGGC AGT GCCGGGG              CTTTAGATGATTGGC 100 37
APY29_RS10980 2473905 .. 2473917 -  -3.3   -4.2349   CCCGTACACCCAAAA                CAGCG CGT CGGTG                GCAGGATGAGGGGGT  61 113
APY29_RS10975 2470134 .. 2470147 -  -3.7  -2.89971   GCTAACAACCAACGA               CGCGG TGTT CCTCG                CTTTTCAACAGGCCC  44 289
APY29_RS10970 2469564 .. 2469574 -  -8.2  -3.53444   GGATGTGGCGCGAAA                 GCGC ATC GCGC                 TGACCTGCCGTTTGT  62 360
APY29_RS10955 2465448 .. 2465485 -  -4.7  -2.72144   TGATCCTGCTGAAAG   GTGCATCGCTCGACCTGC AGT GCAGGACCTACG-CGCAC   GCTGCAGGCCGTTGC  44 220
APY29_RS10925 2461031 .. 2461041 -  -2.4  -3.29461   CAAGTCTGTGGACAA                 GTGC GCG GCCC                 CCTTATGCCATCTGG  45 77
APY29_RS10905 NONE
APY29_RS10900 2455080 .. 2455101 - -15.9  -5.29782   CACACTCACAAAAAA           GGCCGCATC AATC GATGCGGCC            TCTGTTTTTTCTACT 100 64
APY29_RS10895 2452918 .. 2452935 -  -3.3  -4.57304   ATGGAATGAAACAAA             CGACGCA GAAG TGTGCCG              CGTGCAACATGCAGG  69 68
APY29_RS10890 NONE
APY29_RS10885 NONE
APY29_RS10880 2450583 .. 2450604 - -11.5  -3.69094   AATGGATCAGCGAAA           GGCCGGCTC GAGA GAGCCTGCC            TTTTTTGATCTGGCG  76 285
APY29_RS10865 NONE
APY29_RS10860 2446479 .. 2446514 -  -3.8  -2.78384   GGGGCGCGCATCATA    CCGCGGCCACGTCGCTC AGG GCGCGA-GTGGCGGCTT    GCCGCGCTTGGCCCT  42 5
APY29_RS10855 2445401 .. 2445420 -  -9.2  -2.54896   CGGGCATTGAACGTA            TCGGCACC ACGT GGTGCCGC             CGGATTTTCATCAGC  54 442
APY29_RS10835 NONE
APY29_RS10830 2440038 .. 2440054 -  -9.4  -4.35116   GACCGTATAGCAAAA              GCCACC CCCTT GGTGGC              GCGCAGGAGTGGCAA  83 49
APY29_RS10825 NONE
APY29_RS10820 2437988 .. 2438004 - -15.1  -5.24129   CGCGCCGACAAAAAA              GCCGCGC AGT GCGCGGC              CTGATGCATGAGCCG 100 56
APY29_RS10810 2434119 .. 2434133 -  -5.6  -3.64703   TTTCGTCGATCGAAA               TCGCCG CAT CGGTGA               TCTGATCGCGCGGCG  57 120
APY29_RS10735 NONE
APY29_RS10730 NONE
APY29_RS10725 NONE
APY29_RS10720 NONE
APY29_RS10715 2414874 .. 2414887 -  -6.7  -4.11623   GATGATCAAAGGAAA               TGGTG AGAA CACCA                ACGTCACTGTTGGGG  67 279
APY29_RS10705 2412567 .. 2412579 -  -5.5  -3.91897   TGTGCCATCGACAAA                CGGAA GCG TCCCG                ACACCGCGTTGTTCG  62 141
APY29_RS10700 NONE
APY29_RS10695 2411093 .. 2411109 -  -2.1  -3.68265   AAATCCAACCGGAAA              CACGGTG TGT CATCGGG              ATGCCCTCACTGGAA  52 32
APY29_RS10690 2409687 .. 2409703 -    -5  -3.03243   AGTCACTTGCGAACA              TGCGGC GGCCG GCCGCG              TTCACGGGGTGCTCC  47 27
APY29_RS10685 2409225 .. 2409270 -  -5.3  -3.78934   GGCCGTCTACAACAA GGCCGAGTACCGCGAACAGCGC AAG GCGATGCT-GCAGGACTGGGCG GACATGATCGACGAA  60 184
APY29_RS10660 2402703 .. 2402729 -  -2.8  -3.29325   CGTCGACAATCAAGA         GGCAGCTAATCG CAT CGTCGAGCTGGC         AACGCGAGAGTTTCC  46 499
APY29_RS10610 2392460 .. 2392473 -  -9.5   -5.4505   GCGGCCAAGAAAAAA               CCGCC CGGA GGCGG                CTTTCTCGGGTCTTG 100 57
APY29_RS10605 NONE
APY29_RS10600 NONE
APY29_RS10595 2390574 .. 2390589 - -11.8  -3.03124   CGCCATGGCGTAACA              CCGGCC TGCC GGCCGG               AACAGGAGCCACGCG  68 83
APY29_RS10590 NONE
APY29_RS10585 NONE
APY29_RS10580 2387378 .. 2387391 -  -5.9  -3.35992   ACCCATCTCAACGAA               CGCGC CGAC GCACG                CGGTACCGGCATACG  55 515
APY29_RS10525 NONE
        scpB NONE
APY29_RS10515 2369545 .. 2369562 - -12.7  -4.52589   GTCCGCCATAGAAAA             CGGCCCT TTGC AGGGCCG              TTTTCTATTGTGCGG 100 53
APY29_RS10505 2367825 .. 2367836 -  -3.6  -3.32343   TCGAGATGGGTACAA                GCGC TGCC GCAC                 AGATGCCTGCCAGCC  46 73
        ccmA NONE
        ccmB 2364129 .. 2364141 -  -4.1  -3.36327   GCATGCTATCGACAA                TGCAA CGA CTGCA                GCGCTCAACTCAACG  48 30
APY29_RS10480 2363289 .. 2363305 -  -3.6  -3.09516   GCGGCGATGACGTAA              GGCAGG TAGCT CATGCC              GCACTCTCCTGCGCA  43 19
        ccmD NONE
APY29_RS10470 2362532 .. 2362548 -  -5.8  -3.31144   GGGCCAGTGCCACAA              CGGCAA GTGCA CTGCCG              AGTCCGAATTCCGGC  52 142
APY29_RS10465 NONE
APY29_RS10460 2359937 .. 2359950 -  -3.7  -3.14602   GCCAGGGCAGCAACA               GCAGC GTCA GCAGC                CAGGCGCGCGTCATT  47 36
APY29_RS10455 NONE
APY29_RS10450 2358354 .. 2358370 -  -9.4  -3.51924   GCCCCATGTAGACAA              CGGAGC ATCCG GCTCCG              CACCTACCTTCGCAA  65 173
APY29_RS10445 2357034 .. 2357052 -  -4.4  -3.14602   CGTATTGCAGCAACA             TCGGCCGA TAT TCGGCAGC             GCAGAGCGAGCTTCA  47 47
APY29_RS10440 2356318 .. 2356334 -  -5.7  -3.90112   TCGCGTTCAATCAAA              CAGCGCC GGA AGCGCGG              CCATCAGGTCGGTCT  62 0
APY29_RS10425 NONE
        cydB 2349785 .. 2349796 -  -4.4  -2.62792   ATCCATGCGAAATAC                CACA TTGG TGTG                 CTCCTCGAATCGTTG  41 104
APY29_RS10415 NONE
APY29_RS10410 2349504 .. 2349532 - -17.6  -4.10429   AACGACGCCTGAAAA        CACAAAACCGGC ACGAG GCCGGTTTTGTG        TTTTGAAACTGGTCG 100 35
APY29_RS10405 2348148 .. 2348172 -  -3.5  -3.44051   TGGCGATTATCAGAA          GGCCACGCA GCGGGTG TACGTGTCC          CCCGAGCAGCCCAGC  49 45
APY29_RS10395 2345740 .. 2345773 - -11.6  -3.31792   GCAGGATGCCGACAA     CGCCGAGCGCTTCG TGCAGG CGCTACGCTCGGCG      GTGGTGATGGTGAAC  68 321
APY29_RS10330 NONE
APY29_RS10325 NONE
APY29_RS10320 2330406 .. 2330422 - -10.8  -3.34398   TGGCTCGCCGAAAGA              CCCCGC CATGT GCGGGG              TTTTTTTTATGGGCG  69 196
APY29_RS10310 NONE
APY29_RS10305 NONE
APY29_RS10300 2326686 .. 2326698 -  -2.6   -3.4252   CTCGAGTCAGCAGAA                GACC GGGCT GGCC                AAGCAGGCTCTTATA  47 102
APY29_RS10295 2326037 .. 2326048 -  -2.2  -2.59564   GGGTCATCGCAGAAT                GACT CTGC AGCC                 GCACGCTAAGGCGGA  38 133
APY29_RS10290 2325767 .. 2325796 -  -3.3  -3.27022   GGGAGGGGAGATGAA       GCACGCCCGACGC CGAA GCGACGGACCGAC        CGTCAGCAACTCAAG  46 44
         eat 2324343 .. 2324396 -  -3.6  -4.35524   TCGGCAAACCGAAAA CGCTCGCCGCCTGCGGTGAA-G-GCA AAGC CGCTCATCCGGCGCGGGCCGCGGGCG TGTGCTGGGTGCGCA  64 3
APY29_RS10280 NONE
APY29_RS10275 2322019 .. 2322041 -  -5.5  -3.08464   TGATGATGTACGCAA           TGCCCTGCG TCATC CGCATGACA           ACGAGTTGCAGACCA  49 140
APY29_RS10250 2318588 .. 2318600 -  -2.6  -3.66178   GGTTGGAACCCCAAA                CGCA TCTAT CGCG                TTTACAAGGCCATGA  51 195
APY29_RS10240 2317474 .. 2317486 -  -3.3  -2.62263   ACGCTCCCCATAGCA                GGCAG TAA CTGCT                TTCGCTTCATCACAG  39 58
APY29_RS10235 NONE
APY29_RS10230 2315709 .. 2315728 -  -6.4  -3.21099   TGGTGCCAGCACGAA            TTCAGCAC CGCA GCGCCGAA             GGTAGTACAAGTGTT  53 7
APY29_RS10225 2313696 .. 2313713 -  -9.1  -2.53995   ACTGAGCGCAAGCGA             TACGGCC GCAT GGCCGCA              ACGTGCAAGCGCACT  56 168
        epmB 2307415 .. 2307427 -  -6.2  -3.29461   TAAGGGCGGTTACAA                CGGC CGCTT GCCG                GTATCGCCCGGAATT  52 7
APY29_RS10170 2302218 .. 2302249 - -24.6  -3.76952   GGTATCGAATTGAAA      GCACAAGGCCGGGA GCGA TCCCGGCCTTGTGC       GTTTATTGCGCTGTG 100 144
APY29_RS10160 NONE
APY29_RS10155 2300129 .. 2300149 -  -5.3  -2.70946   GTTCGCCAGAAATAC            CATCGCTGA CCG CCAGCGCCG            CACGGTACCTACGAA  45 166
APY29_RS10140 2296140 .. 2296165 -    -6  -3.72576   CTGCGCTGGACGAAA         TGGCGCAGCC GTGGCG GGCCACGCCG          CTGGATGCGGTGCTG  59 495
APY29_RS10125 2293033 .. 2293057 -  -2.6  -3.09933   CTGGAACGGATCCAA          GCGCGTCCGG CGTAT CAGGCTGCGC          TGAAGAAGGGCGGCC  42 143
APY29_RS10110 NONE
APY29_RS10105 NONE
APY29_RS10100 2287389 .. 2287403 -  -8.5   -5.4833   GCAGGCAACAAAAAA               CCCGC GCAAT GCGGG               TTTTTTGTTGCCCAG 100 73
APY29_RS10090 NONE
APY29_RS10085 2284594 .. 2284637 - -11.8  -4.84527   CGGACACATTAAAAA TGTTGCGCAGCATGGTTTTT GAGG AAAATCCATGCTGCACCGCA AAGTTGCAGCAAACG 100 41
        phaR NONE
APY29_RS10075 2283408 .. 2283440 -  -8.4  -3.61715   CAGTTGCTGGAAGAA     TCGCTGGAC-GAGGC CGAT GCCTCCGACCAGCTA      CGCCAGCTGCATGCA  62 370
        queG NONE
APY29_RS10035 2273002 .. 2273016 -   -10  -4.71426   CGGCGACGAAGAAAA               GGACAC GCT GTGTCC               GGAGCTGCGCGCACG 100 443
APY29_RS10015 NONE
         rnd 2267893 .. 2267911 -  -6.6  -4.08216   CGATGTGCCGGAAAA             GCTGCGCC GTC GGCGCAAG             GACCCCTGGGCAGAC  66 299
APY29_RS09995 2264505 .. 2264541 -  -6.5  -2.78712   TCGCCAAGCGAAGGA   GGCGAC-CGACGGTGC GGAGCG GCACCGTCGTGCGGGC    TTTCGCCTTACTCGC  49 33
APY29_RS09990 2264348 .. 2264370 -  -9.8  -4.90266   TCTACCAAGGAAAAA           GGGCCTAGTC ATC GGCTAAGCCC           TTGATTCTATTGGTG 100 36
APY29_RS09985 2262782 .. 2262795 -  -9.5  -2.93348   TCGATGAATATGACA               CGCGG AGAT CCGCG                ATCCGAGGCGGGTAA  58 400
APY29_RS09980 NONE
APY29_RS09975 2260590 .. 2260604 -  -5.6  -4.08064   AAGTGTCCGTGAAAA               CGGGGT AGA ACCCCC               CTCTCCGACAACGAC  65 23
APY29_RS09970 2259290 .. 2259300 -  -2.4  -4.20783   ACCGGACCGAACAAA                 CAGC GCC GCAG                 CTAGTGTTTGCTATG  59 109
APY29_RS09965 NONE
APY29_RS09960 2258279 .. 2258319 - -16.1  -4.07885   CAGTCCCCCTCAAAA  CGCGCAAGCCCCGGGAACA TGA CGTTTCCAGGGCTCGTGCG  TTTGACTCGATGGTG 100 304
APY29_RS09955 2256544 .. 2256565 -  -2.1  -3.36492   GGGTTAATGCGACAA           GGCACTGGC CGAT GCGATCGCC            ACCTTGGCAATGCAC  45 515
APY29_RS09950 2255339 .. 2255389 -  -6.8  -3.55071   CGAGATCGCCGGAAA CACCGA-CGCACTGGCGGCCTGAGC GACA GC-CGTGCCGC-AGGGCGATCGGCG CGGGCTGCGTCGATC  59 39
APY29_RS09935 2252055 .. 2252081 -  -8.7   -3.3782   CAGCGACCCAAGCAA        TCTGCTCGGCAG TCTG CTGCCGGGC-GA         GCGGGTCGCGCGCGT  60 209
APY29_RS09925 2247571 .. 2247583 - -10.5  -2.57132   TGGCCGGCGGACAAT                CGCCG GGC CGGCG                CCGCAGCGTTGCGAA  59 87
APY29_RS09920 2247104 .. 2247115 -  -2.2  -3.72588   GAATCCATAGGGAAA                CTGG CGAG CCAA                 TCGCTGTAACCCGGA  52 99
APY29_RS09870 NONE
APY29_RS09865 2237131 .. 2237141 -  -2.4  -4.37658   AACCTGTGGATAAAA                 CGCG TCG CGCT                 TACTCGCGCAAGGTT  62 256
APY29_RS09860 NONE
APY29_RS09855 NONE
APY29_RS09850 NONE
APY29_RS09845 2234275 .. 2234309 - -11.5  -3.21747   TCAGTCTAGCAGGAA    GCC-GGC-ACGGCGC TGTGGAT GCGCCGTCGCCTGGC    CCGGCTCAGGGCAGA  67 31
APY29_RS09840 NONE
APY29_RS09835 2232064 .. 2232079 -  -4.6  -2.71731   CGCATCCTTCAATCA              GCGCGT ACGG ACGGGC               AGGTCACGCGGTCGC  44 7
APY29_RS09830 2230783 .. 2230805 -  -5.5  -3.72576   TTCGGCGGCATCAAA          CGCTC-CGGC TTCG GCCGCGAGCT           GGCCGAGCACGGCAT  57 264
APY29_RS09785 2220015 .. 2220031 -  -5.1  -4.07568   GGTGGCGCTGGAAAA              CCTGC GCCTGCT GCAGG              ACGAGGGCATTGTCG  64 293
APY29_RS09765 NONE
APY29_RS09760 2213781 .. 2213812 -  -3.6  -4.56597   CCTGCTCGCCAAAAA      TTGAGCACCACGTT CCAA AGCGTGGCGGTCAC       CACAGCGCATCGCGC  69 22
APY29_RS09755 2212372 .. 2212403 -  -2.1  -2.56715   ATCTGGATCAAGGCA      TGTCGGCAGGCGCG TCATC CGCACGCGCCG-CT      TGGGCCTGCAGACGA  38 48
APY29_RS09750 2211614 .. 2211624 -  -6.8  -3.05596   TACGTGGCCACGCAA                 CTGG CGG CCAG                 TTACGGCGTGCAATC  51 236
APY29_RS09720 2204487 .. 2204500 -  -3.7  -2.76263   CGGACTAGTCAATTA               GTCGC AGCT GCGGC                CGCTAACACCAAGGC  42 5
APY29_RS09710 NONE
APY29_RS09705 NONE
APY29_RS09700 NONE
APY29_RS09695 2196128 .. 2196140 -  -9.1  -3.53811   TCGATCCTTGCCAAA                CGCTC GGG GAGCG                CGATTAGTGCGGGTG  68 29
APY29_RS09690 2195066 .. 2195078 -  -9.1  -3.83205   ACCGCCGACATCAAA                TCGCG TTT CGCGA                TCGTTCGCCTGCCTG  74 71
APY29_RS09685 2193086 .. 2193099 -  -2.3  -5.75342   TGTCTCCAAAAAAAA               CCAGG CTAG CCCGA                TCACGGCAATCGGCG  95 204
APY29_RS09665 NONE
APY29_RS09660 NONE
APY29_RS09655 2181683 .. 2181701 - -17.4  -5.24531   ATGCCGCACAAAAAA             GCCCCGGC AGT GCCGGGGC             TTTTTGTTTGCAACG 100 51
        ptsP NONE
        pfkB NONE
APY29_RS09635 2174581 .. 2174595 -  -5.6  -3.14132   CTGGCCGCGCACGAA               GGTGCG CAG CGCAGC               GGTGAAACCAGTCAG  51 113
APY29_RS09630 2173190 .. 2173206 - -13.7  -2.75064   GGTGGCAGGCAAGCA              TGCGCGC AAC GCGCGCA              GCTTCTTGACGGGTC  72 39
APY29_RS09560 2155797 .. 2155815 - -10.2  -3.05384   GCCGCGTTGAGCGAA             TCAGGCCG CCT CGGCCTGC             ACCTGGCGTGGGCCT  62 7
APY29_RS09520 2146951 .. 2146982 -  -3.6  -3.49475   TTCAGCGCGACAGAA      CGCTTGCCTTCTTCC TCT GGGAGAAGGTG-GCG      CGTAGCGCCGGATGC  49 346
APY29_RS09480 2138700 .. 2138748 - -25.6  -2.60079   CGATGCGACAACCCA CATCCAAAC-GCAAAGACCGGCG ATTA CGCCGGTCTTTGCTGTTTGGCTG CTTATCCCACCAACG 100 47
APY29_RS09475 NONE
APY29_RS09470 NONE
APY29_RS09465 2131090 .. 2131112 -  -3.4  -5.35222   AAAAGGCACAAAAAA           CCCACC GGTTTGACGGA GGTGGG           TAGGTAATCCCCCCA  85 66
APY29_RS09455 2130356 .. 2130378 - -19.2  -2.62789   ACATGCAACATCAAG           CCCCTCTCCC CGC GGGAGAGGGG           TTGGGGTGAGGGTAG  87 101
APY29_RS09410 2107438 .. 2107467 -  -8.5   -3.5594   AAGTCATGCGTCAAA       TGGCAGGGGCGTT GGCG AACGCGCACGCCA        ATGCGCTCGCTTGAT  65 190
APY29_RS09405 2105921 .. 2105937 -  -2.9  -4.07568   TCGCTTTCGCCAAAA              CCACCAT CCA ACGGTTG              GGTGCGGTGTCCTCG  58 241
APY29_RS09400 2105194 .. 2105206 -  -3.3  -3.64703   GCGTGTGGATGCAAA                CGGCA AGG TGCCT                GTGGTGTTGCGGGTG  53 358
APY29_RS09330 2087046 .. 2087058 -  -3.3  -2.76422   TACGGCGAAAAAAGC                TGGCC ATT GGCAA                CGCAGTAGGGGAAAC  40 225
APY29_RS09325 NONE
APY29_RS09320 NONE
        mutY 2083996 .. 2084010 -  -7.8  -3.01924   GATTCCTTTGGAAGA               CGCGCT TAC AACGCG               TCGAGCAACTTGCGG  54 16
APY29_RS09310 2083339 .. 2083374 - -13.4  -2.88544   GTTGAGTCCGACAGA    TCGCCACTGCGATGCCG CTG CGGCATCGCACT-GCAA    CCGCCGTTGAGCTTC  74 353
APY29_RS09290 2080193 .. 2080230 - -20.7  -4.17762   GATTCTTGAAAACAA   CGCGCTTCCGAAAGAGC TTCA GCTCTTCCGGAAGCGCC    GTGGTACCTGCAGTG 100 50
APY29_RS09285 2078808 .. 2078821 -  -8.1  -3.56643   TGGAGACCCTGGAAA               GCCAG GCGC CTGGC                GCGACGTTGTGGCTT  60 367
APY29_RS09270 2077699 .. 2077711 -  -3.3   -3.7941   CAGGCCTCACAACAA                TGGCG CGG CGACA                ATCAACGGCGACAGG  54 4
APY29_RS09265 2077019 .. 2077045 -  -7.3  -3.28791   ACGGCGCGCTCAGAA         CCGGAATGTAC GAGGG GTACATGCCGA         TTCCGAGCACCGGCC  58 81
APY29_RS09260 NONE
APY29_RS09255 2074889 .. 2074903 -  -4.2  -2.78463   AGTTTGTGTATCACA               GCGAAC GGC GTTGGC               ACGTGTCTCCAAAGT  42 248
APY29_RS09250 2074057 .. 2074070 -  -3.7  -3.05384   CGGTGCGTCAGTGAA               GCCGC CAAC GCTGC                TGCGCGAGTGGGCAA  45 142
APY29_RS09245 2071802 .. 2071814 -  -6.2  -3.05384   GCGCCGCCGATGTAA                GGCG GCACG CGCC                ACGAGGAGCCTGGCA  49 48
APY29_RS09095 2040008 .. 2040021 -  -2.3  -3.80625   CTGGCACAACCCAAA               CCGCA TTGG TGCTG                CTCAACAAGGCCGAT  54 391
APY29_RS09075 2032515 .. 2032527 -  -9.1  -2.70936   TCAGCAACGACATGA                TGCGC GAT GCGCA                ACGGCGCTGGGACTG  55 99
APY29_RS09065 2031921 .. 2031950 -  -9.3  -3.36878   GCTATGGACGTACAA       CCA-CGAGCGCC CGAATAT GGCGCTCGGCGG       CATCACGCCTGCCAT  63 52
APY29_RS08945 2008215 .. 2008232 -  -6.9  -4.62302   CAAGATGTTCAAAAA             GCCGCGA CGTG TCGCGGT              TTTTTTTTTGCCTCG  78 41
APY29_RS08895 1995401 .. 1995413 -  -3.3  -3.55444   GCCTGATGGGTGAAA                TCCCC GAC GGCGA                GCCCTTCATCGTGCC  49 298
APY29_RS08875 1992875 .. 1992905 -  -8.2  -3.28791   ACCGCGCGTGCATAA       CTCGGGGCATTGGA CCA TCGAAGGCGCCGAG       ACCTCGCAATTCGAA  58 472
APY29_RS08860 NONE
        nadC 1990314 .. 1990340 - -13.7  -2.64144   CCTGCATGGAAACAT         CGCAGCAGGCT GCCAG AGCCGGCTGCG         CGCACGCGTGAAATC  71 39
APY29_RS08850 1989058 .. 1989073 - -11.8  -3.48292   ATGCATGACGAAAGA              GCGGGC TTGG GCCCGC               TTTTTTGTTGTGTGG  74 191
APY29_RS08720 1961957 .. 1961992 -  -9.1  -4.18018   GCGCCGCACGCAAAA   CCGCC-TGC-TGGCGCGC CTG GCG-GCCATGCACGGCGA   GATCGTCAATCACTG  79 245
APY29_RS08665 1950030 .. 1950049 -    -5  -3.14132   GGCCGGTGGCATCAA            CGCCG-ACA ACG TGTTCGACG            CCATCGTGGCCACGT  47 339
APY29_RS08615 NONE
         psd 1939725 .. 1939753 -  -2.3  -3.41602   GCGAGCGCACGACAA       GCCCGGTTGCCG TAGGAG CGG-ACCCGGCC        GCGACGAAGCCGTGC  47 166
APY29_RS08595 1936441 .. 1936455 -  -8.6  -3.65351   GCAGGCTCACTCAAA               TCATCG CGG CGATGA               GCCGGTTTGCAGGTG  65 6
APY29_RS08590 1934448 .. 1934458 -  -8.2  -3.95456   AAACCGAAGAGGAAA                 CCGG CTA CCGG                 ATCGACAACGTGCGC  70 358
APY29_RS08580 NONE
APY29_RS08575 1932183 .. 1932197 -  -5.6  -4.46112   GTCTATTGAAAGAAA               GCGAAC TGA GTACGC               CCCGCGACGAATTGG  74 321
APY29_RS08565 1929857 .. 1929872 -  -3.2  -3.57144   TGGTGGATGTTGAAA              TCACCG ACAG CGACGA               GCACGATCTGTTTGG  49 426
APY29_RS08555 1927714 .. 1927728 -  -2.7  -3.61715   CACGGTCCGCAAGAA               GCCAG GGCTG CAGGC               CAAGCTGGAACGGCT  49 309
APY29_RS08545 NONE
APY29_RS08540 1925788 .. 1925802 -  -2.1  -3.05522   GAAGGTGCTCAAAAT              TGTGCG CTTC CGC-CA               TGGCTTTATGCCCTT  41 31
APY29_RS08535 1922744 .. 1922773 -  -2.7  -2.94416   GACCTCCAGGACAGA       GCTCTGCCTGCGTC ACC GTAG-AGGCAGCGC       CTTCCTGCATAGAGT  40 362
APY29_RS08525 NONE
APY29_RS08520 1919361 .. 1919385 -  -5.7  -3.28712   GGGGGTGTTCGACAA         CG-GCCGGCT GACTGA AGCCAGCTCG          ACTATCCGCCACTCT  52 150
APY29_RS08515 NONE
APY29_RS08510 NONE
APY29_RS08505 1917161 .. 1917190 -  -3.4  -4.01888   ATCGCAGATGACAAA       CGTCATGTCGGT CGCCTC ACCGGCGGGACG        GGCAGAGGTGAGGGC  58 489
APY29_RS08500 1916747 .. 1916778 -   -10  -3.67296   GAGCAGGGACCGAAA      CGACTGCGCTCGCC GCCA GCCGGGCGCAACCG       ATACTCGGAATCGGC  70 135
APY29_RS08490 1915814 .. 1915829 -  -5.4  -3.16191   GCATACCTGCAGCAA              CT-GCGG TCA CCGCGAG              CATCTGTTCGGCGAA  49 178
APY29_RS08480 1911849 .. 1911865 - -10.8  -5.45652   AGCCGCAACAAAAAA              GCCCCG ACACG CGGGGC              TTTTTCGACACGCGT 100 48
APY29_RS08475 1908389 .. 1908407 -   -16  -5.36441   CGTGCATAGAAAAAA             GGCCTCGG AAA CCGAGGCC             TTGGAGTAAATAACA 100 84
APY29_RS08465 1904157 .. 1904184 - -18.4  -4.99043   GGCGTACAAAGAAAA        CGGGCGGCCGTC TTTC GATGGCCGCCCG         TCGTTTTACCGCGAC 100 48
APY29_RS08460 NONE
APY29_RS08455 1901647 .. 1901677 - -11.1  -3.14132   GGCCGCTTGCATGAA      TGCGACAGGCCCGC GCGT GCGGGCCCGT-GCC       GGGTGCCATCGTGGT  67 69
APY29_RS08450 1899477 .. 1899495 -   -16  -4.65722   CCACAGACAAAGAAA             GAGCGCGG GAT CCGCGCTC             TTTTTTGATTGCCTA 100 54
APY29_RS08415 NONE
APY29_RS08410 1891543 .. 1891563 -   -14  -5.06414   TCCGCGCAACAAAAA            GGCCGCGA GATCG TCGCGGCC            CTCTTCGAATGAGTC 100 56
APY29_RS08390 1886490 .. 1886509 -  -6.4  -2.82516   CGTCTGAGCACCACA            CCGACAGCC GGG GACTG-CGG            CCGTTTGCAGACGTG  48 144
        tilS 1884933 .. 1884949 -  -3.5  -3.57144   TTGGCCATCGCTAAA              GTGTGCG GCG CGCGCGC              AGGCGGGTCAATTCG  51 33
APY29_RS08375 NONE
APY29_RS08370 1883302 .. 1883312 -  -3.2  -2.74144   GCTCCATTCTCAAAC                 GAAG GAG CCTC                 CTCTAAAACCGGGGC  40 510
APY29_RS08365 NONE
APY29_RS08360 1880873 .. 1880908 - -24.2  -3.59979   CTGGTGCAGTGGAAA    CAACAAAGGCCCGGCA GCGA TGCCGGGCCTTTGTCG     TGTCAGGCGATGGAG 100 44
APY29_RS08345 1877602 .. 1877620 -    -8  -3.09327   CTACCTGATCGAAGA             CGGCAAGG TCA CCGCGCCG             GTCAAGGGCGCCACC  54 381
APY29_RS08335 1875164 .. 1875199 - -12.5  -3.06183   GCCATCCGCATCGAA    GGCCCGGCCGCCGAC ATCGCG ATCCGCGGCCAGACC     GACCTGCGCGCGCAG  67 335
APY29_RS08315 1868389 .. 1868412 - -15.4   -2.9162   CAAGCGTGCAAACGA          CATTGCCCTC CGAA GAGGGCAATG           CAAACGCAACACGTG  79 65
APY29_RS08310 1864942 .. 1864965 - -12.4  -4.67982   GTGGATGCAAGAAAA          GCCCAGCCCT TCGC AGGGCTGGGG           AAGCGACGCTGACGG 100 50
APY29_RS08305 1863655 .. 1863670 -  -5.4  -4.56597   CGCGCTGCCGAAAAA              CGCCTAC GTG GT-GGCG              CTTGATGTGCCGGGG  74 359
APY29_RS08295 1861678 .. 1861695 - -14.1  -3.70773   GTGCAGAGTCAACAA             CGGCGCC CTTG GGCGCCG              TTATCGTTTGGGACG  84 128
        trxA 1853350 .. 1853365 -  -3.2  -3.40899   AAGTGCTCAGCATAA              CATTCG CATG CGTATG               GAGGCTTTGCCGCAT  49 300
APY29_RS08250 1852492 .. 1852539 -    -9  -3.78953   AGGGCCATCACCAAA CGCAAGCGCTATGAGTTGCAGC TTGG ACTGAGGCCCGTAGCGCCTGCG TCAGCTCGGCGTTCT  71 347
APY29_RS08230 1847777 .. 1847818 -  -7.3  -2.83641   CAAGGGAGCAGCACA CTCATCGACATCGACATCG ACAT CGACATCGACATCGACATG  GACAACGACAAAGAC  53 431
APY29_RS08225 1847535 .. 1847553 -  -5.9  -3.29263   ACATGTCGCTCACAA             CCGCCTG ACCTG CACGCGG             TGTCGGCGCGCCCAG  52 107
APY29_RS08220 1847111 .. 1847163 - -12.8  -2.94144   CCCGGACGCAAAGCA TGCATCGCATGGCATGACGCCGACAC AGC GCGCCGGCGTCAT-CC-CGAGATGCG AAGACCTGCCGCAGG  70 48
APY29_RS08215 1846151 .. 1846165 -  -5.6  -2.75064   TTCCCGATTCAACCA               GCAGGC GGC ACCCGC               ACCGGCAACGGCACA  46 4
APY29_RS08205 1844368 .. 1844398 -  -3.9  -2.52464   CTGTCGTTGAAGGTA      TGCATCGGCGGCAC GGTG GTGCCGCGGAC-CT       TGGGCTGCGCGGAAC  41 16
APY29_RS08200 NONE
APY29_RS08195 NONE
APY29_RS08190 1842978 .. 1842998 -  -6.8  -2.60763   GCGAGATCGCAGAAG           CCGCCGCCG AGTT CGGCGA-GG            TATTTTCCAGCAGCG  47 356
APY29_RS08175 1839505 .. 1839529 -  -7.8  -5.60993   TGCGTGACAAAAAAA         GC-GACGCGTG AGGA CACGCGACTGC          ATTGGTACGGCTTGA 100 287
APY29_RS08160 NONE
APY29_RS08135 NONE
APY29_RS08130 1827816 .. 1827859 -  -3.1  -4.07687   ACTCGGGCTTGAAAA CCCAGCTCAGCGTGTTGCTGC AGCC GCAG-ATCATGCTG-GCCGGC GTGGCGATCCTGGCC  59 390
APY29_RS08110 1824097 .. 1824109 -  -4.7  -3.06796   CTTCAGTGGATGCAA                CGTGC GCC GCCCG                ATCATAGCCGTGGCG  47 77
APY29_RS08105 1823082 .. 1823105 -  -5.2  -3.48593   GAGCGGCTGAGACAA          CAGCAACCCG TCGT CAGATGGCTG           TGGATGCCGCATGCA  53 126
APY29_RS08100 1821626 .. 1821666 -    -6  -3.14564   GGAGGCGGTGATCAA GCGCGCCG-ACCAGGCC CTGTATGC GGCCAAGCGCGGCGGGC  GCGATCAGGTGGTTG  51 215
APY29_RS08075 NONE
APY29_RS08070 NONE
APY29_RS08065 NONE
APY29_RS08060 1812656 .. 1812672 - -13.7  -2.70932   GGGCTGGTGCAATTA              CTGGCCG CCT CGGCCAG              CATGACCGCCCAGCG  69 374
APY29_RS08035 NONE
APY29_RS08030 NONE
APY29_RS08025 NONE
APY29_RS08020 NONE
APY29_RS08015 1803862 .. 1803872 -  -6.8  -3.14132   TGTCCGGCCCATCAA                 GGTG TGC CACC                 AGGTGCCCAGGATGC  53 11
APY29_RS07995 1800449 .. 1800466 - -14.1  -5.00642   CAACGCACACAAAAA             GGCCGCC CGAA GGCGGCC              TTCCTTCCACTCAGC 100 59
APY29_RS07990 1797677 .. 1797710 - -13.8  -3.05816   GCATGCGGTAGCGAA     GTTCCGCGCAGCAG TCTGGG CTGCTGCGCGGCTC      AGGGTGTGACGGCGA  75 42
APY29_RS07985 NONE
APY29_RS07980 1794436 .. 1794452 -  -2.2  -2.71791   AGGTGTCGGCCAAAT              GGGC CTGCATGCC GCCC              GACGTGGAATGGCCG  39 67
APY29_RS07975 NONE
APY29_RS07970 1791974 .. 1791984 -  -8.2  -3.29144   GCAGCCGCGTCACAA                 CGGC CGT GCCG                 CCGGGACGATCACTT  60 9
APY29_RS07955 1788116 .. 1788131 -  -6.8  -3.86897   CGTATCCTGCACAAA              CGCCTGC TGC GC-GGCG              GACGTTGATCCGGGG  65 355
APY29_RS07945 1786571 .. 1786585 -  -6.4  -2.70932   GCCCGGCGTCAAGCA               TTGGCA CGG CGCCAA               TGCCAACGTGGCGAT  47 243
APY29_RS07935 1784831 .. 1784867 -  -9.2  -2.59683   ATTGCAGCCGACAAG    GCCGCCACGCCGGCGC AGGTG GCGTTGGCGTGGTTGC    TGTCGCGCAAACCAT  54 275
APY29_RS07905 1776296 .. 1776349 - -10.3  -2.62184   GCCCGGGTGACAGCA TGCGTGCGATGGCAAGGTGTTGACAC GCG GTCGCAACACCGTTCAATCGC-CGCA GCAGCATTCCTGCGC  59 213
APY29_RS07865 1767993 .. 1768028 -  -6.3  -3.19091   ACAGGCACTGATCAA   TCT-GC-TCGAAAACGC CATC GCGTTTTCGCCGCAAGA    CAGCCATGTGCGCCT  51 484
APY29_RS07845 1764676 .. 1764690 -    -7  -2.61199   CAACCGTGAATGAAT               CCGGTG TGC CGCCGG               GAGCCGACAGGGAGG  48 339
APY29_RS07840 1763795 .. 1763809 -  -2.8  -4.36914   GCGGCGTCTAGAAAA               TCAAAG CCG CGTTGA               TCGAGTGCGCGATGC  64 286
APY29_RS07835 1759682 .. 1759725 -   -11  -3.14463   AACCGCGCCGATCAA CGCGTCAGTC-AGGTCGTGCA GGA TGCACTGCCTCGGCTGACGCA ACTGAGCAACCAGGC  67 509
APY29_RS07810 1753831 .. 1753868 - -18.5  -3.58343   GTCATGACGGGCAAA   CGCGACCAGGCAG-TGGA CTG CCCGCCTGCCTGGTCGCG   TTTTACACGTGGTGA 100 282
APY29_RS07805 NONE
APY29_RS07800 1751086 .. 1751099 -  -3.1  -2.75064   GGGGTCAGGTAACGA               CAAAC GATG GTTCG                GACCGGAGCGATGGC  40 49
APY29_RS07795 NONE
APY29_RS07790 NONE
APY29_RS07785 NONE
APY29_RS07780 NONE
APY29_RS07775 1744969 .. 1744987 -  -3.1  -3.89822   CATGGACGGGAGAAA             TGCGC GTCGATCCT GCGCA             GGCGCAGTGGTTGCG  56 167
APY29_RS07750 1738302 .. 1738318 -  -2.1  -3.28712   CTGCTCTTCTGATAA              TGGCGGC GTC GGTGCCA              GCCCTTGGTACTGCC  44 407
APY29_RS07740 NONE
APY29_RS07735 1735571 .. 1735607 - -14.4  -2.79492   CGGTGAATGCGAAAT    CGGAATCGGAACGGGC GATAG GTCCGCGCCGATTCCG    GGCATGCGCCGAGGG  75 354
APY29_RS07720 NONE
APY29_RS07715 1731597 .. 1731632 - -27.8  -3.25823   CTTCGGCCACATCAA    CGCAACAGGGCGCGAT TCGC ATCGCGCCCTGTTGCG     GTCCTACCTCTTGAT 100 71
APY29_RS07700 1729132 .. 1729145 -  -4.5  -4.13767   TTCGTCATGCGAAAA               GCGCGC TTA GCG-GC               TGCTTTCCATGGGAA  63 18
APY29_RS07695 1727881 .. 1727906 - -17.6  -3.51934   GTGCGTTGACAAAGA         GTGGCCCGCG GCAGTG CGCGGGCCAC          CGGAGCCTTACTGTT  93 33
APY29_RS07685 1725779 .. 1725798 -  -6.4  -4.33182   GCATGCATAAAAGAA            CATCCTGGC TAT GCC-GGACG            CGGGGCCATTGGCTA  73 316
APY29_RS07645 1716163 .. 1716177 -  -3.5  -2.53263   CTTACGCGCAACGCA              CGCAGC GTGG GC-GCG               CCGTCCATGCGTTGC  39 113
APY29_RS07635 1713883 .. 1713913 - -13.3  -3.05963   AGGCCGACGCCAACA      GCCCGCCGGGCTGC CTGT ACAACCCG-CGGGC       GGCCAAGCGTGCGTA  70 283
APY29_RS07600 1705991 .. 1706006 -  -3.2  -3.16564   GCGGCAGCTTACCAA              TCGATG CGGC CGTCGA               TCACCTGCAGCGTCG  44 3
APY29_RS07595 1704904 .. 1704929 - -19.1  -4.08216   GCATCGTGCTGAAAA         GAACGCTGCGG GCAA CCGCAGCGTTC          TTGCGTTTTGCGGAG 100 167
APY29_RS07560 1700504 .. 1700523 -  -2.8  -3.04398   TGCGGCGTGCAAAAG            GTGTCTAGC CGC GCTGGAC-C            GTGCGCGCCTTTGTC  43 10
APY29_RS07555 1699260 .. 1699280 -  -9.7  -3.60792   CGGGCAAGGTGCAAA            TGAGCTTCG ACG CGATGCTCA            TGCTGGTCGCCTTCT  64 319
APY29_RS07535 NONE
APY29_RS07530 1693545 .. 1693569 -  -2.7    -5.252   CAGCGGCAGAAAAAA          CGTACAAAACG CAT CGGCTTGCCCG          CGCCATGCGCACGTT  84 395
APY29_RS07525 1692917 .. 1692934 - -12.7  -5.78622   CGATGGCAAAAAAAA             GACGGCC CGAG GGCCGTC              TTCGTGACACCGGAG 100 51
APY29_RS07520 NONE
APY29_RS07515 NONE
APY29_RS07510 1691177 .. 1691188 -  -5.8  -3.02511   GTGACTCCGGCAACA                GGTG ACAT CACC                 TTAGTCGGCGCCGGT  49 51
APY29_RS07505 1690485 .. 1690508 - -15.2  -4.08958   AGCTCGAAACAAGAA          GGCCCGGCGC AGGT GCGTCGGGCC           TTTCCATCTGGAGTG  95 79
APY29_RS07490 NONE
APY29_RS07485 1687222 .. 1687241 - -10.7  -2.61264   TCCCGGAGGGAGAAG            GGTCGGC GCGTCA GCCGACC             GAGCCTTCCAGCGAG  62 16
        sufC NONE
        sufD NONE
APY29_RS07470 NONE
APY29_RS07465 NONE
APY29_RS07460 1682733 .. 1682751 -  -8.9  -3.01712   TTCTTCTTTGCAATA             TCTGCCA GTCGG TGGCAGA             CGCTGCGATGTGTGG  57 78
APY29_RS07455 1680148 .. 1680166 -  -3.8  -3.31144   GCCTGAGGGTTAGAA             GCTGAAGG TGG CGTTCAAC             ACTGCCGAGCGGCCG  48 1
APY29_RS07450 1679415 .. 1679429 -  -2.7  -2.88544   GCGCAGGCTCAGACA               TCGGC CCATT GCCGC               AGCAGGTTGTGATAC  40 4
APY29_RS07445 NONE
APY29_RS07440 NONE
APY29_RS07435 1677435 .. 1677449 -  -3.4  -3.10715   TGCACGACGACGCAA               GGCGCG GTG CACGGC               GCTGCGAACGCCAAC  43 48
APY29_RS07430 NONE
APY29_RS07425 NONE
APY29_RS07420 1673356 .. 1673373 -  -2.7  -3.62597   TTGAGTCTGCAAGAA             CTGCA GGAAGCGA TGCAG              CCACGCGATCCGCCG  53 355
APY29_RS07400 1669469 .. 1669495 - -18.1  -2.78816   CGACCTCTCATGACA         TCGATGCGCGC CAACC GCGCGCATCGA         TGAAGCCACAACTCA  86 38
APY29_RS07395 1668713 .. 1668729 -    -3  -2.82491   GATAGACGCAGTAGA             GACGCGT TGAA ACGC-TC              AGCGCTTGCTGCCAC  40 24
APY29_RS07390 NONE
APY29_RS07385 1666803 .. 1666815 -  -4.1  -3.33696   GCTGTTTCGAACCAA                GCAAC GTT ATTGC                CAGTGCCGACAGCAT  48 154
APY29_RS07365 NONE
APY29_RS07360 NONE
APY29_RS07355 NONE
APY29_RS07350 NONE
APY29_RS07345 NONE
APY29_RS07340 1658741 .. 1658771 - -25.6  -3.66874   GCAAGCCGATTGAAA       CGAAGAGCCCGGCT CGC AGCCGGGCTCTTCG       TCGCCGCCGCAGGCA 100 156
APY29_RS07320 NONE
APY29_RS07315 NONE
        lptC NONE
        lptA NONE
        lptB 1653123 .. 1653147 -  -6.4  -5.05782   ACTGACTGGAAAAAA         CGTTG-GCGCG GCGA CGCGCTCAAAG          GCGGAAAGTTTCCCC  86 20
APY29_RS07295 1651628 .. 1651643 -    -6  -3.89346   CGGTGATCCGACAAA              CCCGGC GCAG GCCGGC               GTTGCGGTGGTTGCA  62 44
        raiA NONE
APY29_RS07285 NONE
APY29_RS07280 NONE
APY29_RS07275 NONE
APY29_RS07270 NONE
APY29_RS07265 NONE
        ptsP 1645788 .. 1645804 -    -8  -3.16564   GCGGTACGCGATTAA              CGATGC AGGCG GCATCG              TCGATGCGCTTTTCG  56 234
        mgtE NONE
APY29_RS07245 1643113 .. 1643126 -  -4.5  -4.69053   GAGCAGCTAACAAAA               CGACT GCGC AGCCG                CCAGGCGGGCGCGGC  75 200
APY29_RS07215 1636539 .. 1636550 -  -2.2   -3.7282   GGACCTGATCAACAA                CTAC GTTG GCAG                 CGGCATCACCTGGAG  51 244
APY29_RS07205 1634828 .. 1634843 -    -4  -3.30124   CGTGATCGTCCAGAA              CATGACC ATC GGTC-TG              CTGCAAGGCGCTGAA  47 394
APY29_RS07195 1633555 .. 1633571 -  -3.6  -3.63515   CCGCACGTGGAAGAA              CGCGTG GCGTG CATGCG              CCTGGTCGGCAATTT  54 401
APY29_RS07175 1629966 .. 1629997 - -12.3  -3.21099   GTGGGCCAGGAGTAA      GCCGGCACAACAG ACGGTG CTGCTGTGGCGGC       TATTCCAGCGCGTCG  70 25
APY29_RS07170 1629750 .. 1629760 -  -2.4  -3.59979   TCGCTGCACGTCAAA                 CCGG CGC CAGG                 CAGTGCTTGGACTGC  49 10
APY29_RS07160 1627953 .. 1627975 -  -5.5  -3.61398   CGGGGGCTGCAACAA          GCGGGCGCCA TCGT TGGCGCC-GA           ACGAGCCTAGCGGAA  57 43
APY29_RS07155 NONE
APY29_RS07150 1626473 .. 1626502 - -20.8  -3.16921   ACCAAGCGCGATCAA       GCGTGGCAGGCG CAACAT CGCCTGCCACGC        GGCTTGGCCGCTTAC  95 37
APY29_RS07140 1625668 .. 1625684 -  -5.1  -3.61178   GGCAGCGATCCGAAA              CAGCG GCCCATG CGCTG              TTTTTTCGCAGCTCC  55 52
APY29_RS07135 1624385 .. 1624407 -  -6.1  -3.20633   TGAGAAGAGATGCAA           CCCTCCGGG AAGCG CCCTGTGGG           CGCCGATACCGCGTT  51 185
APY29_RS07105 1616066 .. 1616095 -  -9.9  -3.10464   TCATCAACTGCAAGA       CCTTCGCCCTGGC GAAT GCAAAGGCGATGG        CGGATAACCATGACT  62 449
APY29_RS07090 1614996 .. 1615016 -  -7.5  -2.63348   GGCATTAACACGAAT            CCCTGCCGA CTC TCAGCATGG            TCACACACTGAACTG  51 41
APY29_RS07075 1610912 .. 1610931 -  -7.1  -3.46068   CTCTCAAGGGAAAGA            GCCTCCGG GAAAG CCGG-GGC            GGTTCACTCAGTGCC  57 34
APY29_RS07070 NONE
APY29_RS07065 1608791 .. 1608807 -  -9.4  -2.87132   GTCGCGCCTGACACA              TGCGCC AGCGG GGCGCA              AGGCCTCGGGCGCAT  58 411
        aroK NONE
APY29_RS07010 NONE
APY29_RS07005 NONE
APY29_RS07000 1599047 .. 1599059 -  -3.4  -3.14132   GCTTGGCCGGAGGAA                CGAT GCATT ATCG                CTTCCCTGCTGTGCA  44 191
APY29_RS06995 1597552 .. 1597589 -  -8.4  -3.60627   GCACCGCAGTTGAAA  TCGCACACGGCGCTGCGC TGGC GCGCGGCGCTG-GT-CGA   TGGCGCAGCGGCCGC  65 42
APY29_RS06970 NONE
APY29_RS06965 NONE
APY29_RS06960 1583276 .. 1583303 -   -12  -5.24129   TGTGGGCATAAAAAA        GCGGCGGACC CGACGAGT AGTCCGCCGC         TCAGTGGCTGCGTCC 100 58
APY29_RS06950 1581352 .. 1581362 -  -3.2  -3.40403   CCGCGTGCACGAGAA                 CTGC AGT GCAA                 GGGCATGCATCTGTG  49 100
APY29_RS06945 1580051 .. 1580083 - -12.1  -3.05463   ACCGGCCGCAGTGAA      GATGAGAGGGCGA CCAACCC TTGCCCTCTCATC      CACCCACAGCATTAC  68 37
APY29_RS06920 1575152 .. 1575164 -  -4.7  -2.83012   AAGCCGACGATTATA                GCGGC TTC GCTGC                GGCACGCTTTTGTGG  46 95
APY29_RS06915 1573429 .. 1573440 -  -3.6  -2.84617   CATGCCAAAAAGGTA                CCGC AATT GCGA                 GCAATTCGCATCGCC  42 77
APY29_RS06910 1572699 .. 1572719 -  -6.8  -2.63102   AGCAGCGGGAGAGGA            GGGCACGT TATTC ACGTGCGC            AATGGTTGGCGATGG  48 78
APY29_RS06905 1570303 .. 1570315 -  -4.7  -3.30443   CGATCACCAGAGCAA                GCGCG GAG CGGGC                CATGCAGACCGTACG  50 468
APY29_RS06885 NONE
APY29_RS06880 1566563 .. 1566587 -   -15  -4.93968   ATCCACAACGAAAAA          CGCCACCGGC TGCGG GCCGATGGCG          TCTAGATAAATGCTT 100 54
APY29_RS06875 1563490 .. 1563507 - -12.7  -6.02914   GTTAGACAAAAAAAA             CAGCCCC AAAC GGGGCTG              TTTTTCTTGGGGCGG 100 47
APY29_RS06865 NONE
APY29_RS06855 1559263 .. 1559281 -  -3.1  -4.08394   ATAGGCTTGCCAAAA            GTCACGCG CTAT CG-GCGAC             ATCGTTGAGGGTTGA  59 299
APY29_RS06840 NONE
        fadE 1554634 .. 1554659 - -21.9  -4.07133   CATCTCCACAAACAA         CCACGGCGGGC CGAA GCCCGCCGTGG          TCTATTCTCGCCCCA 100 50
APY29_RS06820 1550695 .. 1550718 - -16.8   -4.2028   GAGATACAGAAACAA          CAAAGGCGGC CGAA GCCGCCTTTG           CCGACGTCACCGACA 100 64
APY29_RS06810 1548312 .. 1548325 -  -8.1  -3.51232   CCGCGTCGAAAGCAA               CGGTC GCGT GACCG                TCGGCATTTCCGACC  60 343
APY29_RS06765 NONE
APY29_RS06760 1540300 .. 1540319 -  -4.9  -3.85698   GGCGTTGCCGATAAA            CGCCTGG TCGCGC CCAGGTG             CGCTCCTAAGGCGTC  60 47
APY29_RS06750 1535292 .. 1535321 - -17.9  -5.75945   AGGTCCCAAAAAAAA       GCGCGCCACCG TGGAGGGT CGGTGGCGCGC        CGGGACTACATCAGA 100 36
APY29_RS06745 NONE
APY29_RS06740 NONE
APY29_RS06735 NONE
APY29_RS06730 NONE
APY29_RS06725 1524075 .. 1524103 - -22.5  -3.09516   CGCCCCATCATGCAA        CAGGCGCCGACTG AGA CAGCCGGCGCCTG        TTGTGCGTCATGCAA 100 50
APY29_RS06715 1520961 .. 1520973 -  -3.3  -3.47227   GTTCAAGCAGCACAA                GGCAG CCC CTTCC                ATTTCCGCGCGCCAA  48 473
APY29_RS06685 NONE
APY29_RS06680 1511706 .. 1511716 -  -4.6  -3.44146   TTGCGGGAGAAGGAA                 GGCA GCG CGCC                 CCTGCTTGCGGAAAA  53 91
APY29_RS06675 1509659 .. 1509683 -  -6.9  -3.03243   ACGCATCCGCGAACA          GGCCGCTGCCG CGA CGCCTGCGTCC          ACGACCTGATGGCGG  51 84
APY29_RS06665 1506269 .. 1506281 -  -6.9  -3.53745   GACACTGCAAAGTAA                CCGCC TCT GGCGA                CAGCGTCACGGCTGT  57 70
APY29_RS06655 NONE
APY29_RS06650 1504025 .. 1504065 -  -7.3  -2.78384   GGTTGGCCCACGAGA  GGTCTCGGCAGCGGCAAGC ATC GCTGGCGGACGCCCGGACC  GGTCACCAGGCACAT  52 277
APY29_RS06645 1502238 .. 1502248 -  -6.8  -3.14344   GACGCGTTGCAGCAA                 GCGT GAA ACGC                 GCGCAACGCCCCGTT  53 122
APY29_RS06630 1500134 .. 1500154 -  -9.7  -2.71712   GTCTGGCGTTGAAAC            CCTTCTTCC ACC GGCAGAAGG            TGGCGCGCAGCGCCG  57 77
APY29_RS06625 1499457 .. 1499467 -  -6.8  -3.05384   TGGTCCGCCAGCCAA                 TCGC TTG GCGA                 TGTGGAAAATTTCAG  51 315
        gshB NONE
APY29_RS06570 1483487 .. 1483514 -  -2.1  -2.71712   GCGCTGCTCGGAAAT       GC-GCGCGAT-CAG GTG CTGCAT-GCGCAGC       CGGAAGCATTGCTGA  38 431
APY29_RS06540 NONE
        pqqA 1469984 .. 1469994 -  -4.6  -2.50493   TGCAGGATCAAAACT                 CGCC GGA GACG                 TAGCAGTTGATTTCG  43 7
APY29_RS06515 NONE
APY29_RS06510 NONE
        pqqD NONE
APY29_RS06500 NONE
APY29_RS06495 NONE
APY29_RS06490 1464214 .. 1464231 -  -6.3  -3.95219   CGCAAAGTGGACAAA             TGCGTCCA ACG TGG-CGCA             GTGGTTGGTGAAAAG  65 130
APY29_RS06485 NONE
APY29_RS06480 1460179 .. 1460235 -  -3.3   -3.2614   GACGGCGCACAGGAA CCGGCGTGTGTAAGTGGTAGATGCCGA TTC TGGGCACCGGCCGCGCCCACCCGGCGG TGAGCGCAGTCGTGT  46 52
APY29_RS06475 1459823 .. 1459860 - -12.6  -3.61268   CACCGAACGCGCAAA   GCGCGATCCTGCGCGC GACCAG GCGCGCATGCTCGAGC    TCAAACCGTTCGTGG  74 291
APY29_RS06465 1455155 .. 1455173 - -11.7  -3.22516   AACATGACACCAAGA             GCCCCCT GAGTT AGGGGGC             GCGCCGAAGGCGCGG  70 125
        recQ 1452875 .. 1452899 -  -5.6  -3.14602   TGGACTCTACGAAGA          GGGGCTGGCA GCGCG TGCCAGCTCG          CTGTGTGAAACTAGC  51 120
APY29_RS06450 NONE
APY29_RS06445 1451449 .. 1451472 -  -5.1  -3.12351   GCGCGCGACATGGAA          CGGCCTGCG GCGTCG CGTTGGCCG           GGCAGTACGCAGGCC  48 428
APY29_RS06440 1450254 .. 1450287 -  -7.3  -3.14132   GCGGTTTGCGATCAA     GCACGTGCAGCCCGG CCAA CTGCGCTACATGTGC      GGCGAAGTAGGCCTG  52 231
APY29_RS06430 1449215 .. 1449256 -   -11  -3.27525   TGCCGGGAAACGCAA CGT-GCTGCCGCTTGCGC-CA TCG CGTGCGCAAGCAGC-GCGACG CGATGGCGATCACTC  69 45
APY29_RS06420 1446469 .. 1446498 -   -15  -3.01712   TGCGCCGTTGCAACA       GCCAAGCGCGCC TCTCAG GGCGCGCTTGGG        ACGACGTGAGCGGCT  78 124
APY29_RS06410 1444536 .. 1444550 -  -2.1   -3.5393   ATTAGGGCCGGTAAA              CT-CGG AGCG CCGCAG               ATGCATGGCAGTCCG  49 77
        queC 1441964 .. 1441978 -  -3.4  -3.08133   TACCGACTGAGCTAA               CGGCCC ACT GACCCG               ACATTGCGTCGGGGT  43 64
APY29_RS06390 1441547 .. 1441563 -    -5  -4.25104   TTTCGCCCAGCAAAA              GCGAGG TGAGC CCGCGC              CAGCTGGCCGACTGG  66 356
APY29_RS06300 1424901 .. 1424940 - -11.5  -3.67989   AAAACCTCACCGAAA GCAGCAGC-GCCGG--TGGC GAT GCCAAGCCGGCCGCCGCCGC CGAGAGCAAGCCTGC  75 152
APY29_RS06290 1422935 .. 1422960 -  -6.7  -3.16564   GCCCCATTGCAGCAA         CGCCGCAGACC ACAT GACCAGCAGCG          CAGCGACTAACGACA  53 55
APY29_RS06285 NONE
APY29_RS06280 NONE
APY29_RS06275 1417388 .. 1417401 -  -3.8  -3.21199   CATGGACCAAGGTAA               GCGA TGTCAG TCGC                CCGACGATGACGGTC  45 320
APY29_RS06260 1415263 .. 1415275 -  -6.9  -3.62518   GGAAAGACGTCCAAA                GCGCC CTA AGCGC                GGCAGTGCTGCTCAG  59 37
APY29_RS06245 1409761 .. 1409771 -  -8.2  -3.53563   AGAGCGGCTGCCAAA                 GCGC AGC GCGC                 AGACGGCGCACACCA  62 350
APY29_RS06235 1409172 .. 1409185 -  -3.7  -2.78596   GACGCCTGCACCAGA               CCTGC TACG GCGGG                CGCTCGCTTGCACCA  42 76
APY29_RS06230 1406543 .. 1406566 - -18.2  -3.05384   TGCCGCGCGACTCAA          GTGCCGGTCG TGGC CGACCGGCAC           TTGGGAGTTACCACT  90 33
APY29_RS06225 1403744 .. 1403765 - -15.9   -4.1021   GCCCACAACGACAAA           CACCGCCGA TCAC TCGGCGGTG            TCTGCGTTCACGCGT  95 74
APY29_RS06215 1402150 .. 1402176 -  -8.7  -3.21925   ACAGCGCATGATTAA        CGCG-ATGCGAC ACGT GGCGCATGCGCG         CAAACAGAGACATGC  58 76
APY29_RS06210 1400177 .. 1400187 -  -4.6  -3.28924   CATCGCCCGTGACAA                 CCAC GAT GCGG                 CTACGACCCGGGGAA  50 118
APY29_RS06190 1396538 .. 1396551 -  -2.3  -3.27525   GGCGTGGAAACGGAA               CGTCG ACAT CTACG                GCGTGCTCCTGCAGG  45 21
APY29_RS06185 1394289 .. 1394307 -  -5.9  -2.70932   GTGCTGCGGCAATGA             TGCGTGC CTCAT GCACGCC             GTGTTGTCTTGGCGC  46 123
APY29_RS06180 NONE
APY29_RS06175 1391135 .. 1391159 -  -9.1  -2.74012   CCAGTACCGGAACCA          GGATGCGCCTC ATC GCGGCGCGCCC          GCTTGCCTGCGCGGC  57 10
APY29_RS06170 NONE
APY29_RS06165 NONE
APY29_RS06160 1386485 .. 1386511 -  -7.3  -3.17219   CACAAGTTGCAGCAA        CTG-GCCGGC CCGTCGCT GCCGGCGCAG         GCGTACAACCCGCCA  56 432
APY29_RS06060 NONE
APY29_RS06055 1363097 .. 1363122 -  -9.7  -3.59979   TCCTCTGACGCCAAA         GCCCGCACGCCA GAC TGCCGTGCGG-C         TTTCGCACATAAGTG  68 195
APY29_RS06025 1354831 .. 1354845 -  -4.2  -3.28712   CGCTGTTGCTCAGAA               CGAGTA CCG CACCCG               CCCATACCAATACGC  48 5
        otsB 1353830 .. 1353852 -  -3.2  -2.93991   TTGAAGTGAATGAGA           GCAGGTGCGC TGT GCTCAGCGGC           TGCGTGCGTTGCGTT  42 18
APY29_RS06015 NONE
        otsA 1350255 .. 1350287 -  -8.4  -3.38072   GTGACGGAATAGGAA      CCAGCGTTCCAACC TGCAC GTTTGGCACACTGG      AAACACGCGGATGTT  60 392
APY29_RS06005 1347396 .. 1347417 - -13.7  -5.93809   CGCGCATAAAAAAAA           CCGGCCGTC TCGC GACGACCGG            TTTGACTGGTGCATC 100 184
APY29_RS05995 1344894 .. 1344913 -  -6.3  -3.15544   GGCGATCCCGACCAA            TGGCGCG TAGGAG CGCGCCT             GAGCGCAAGGAGCAT  53 100
APY29_RS05970 1341032 .. 1341047 - -10.4   -5.4505   CGCCGCAACAAAAAA              GAGGCC TTGC GGCCTC               TCTTCGGTCATGCGC 100 54
APY29_RS05965 1339461 .. 1339499 -  -9.6  -3.53012   TTCGGCCTGGCGAAA  TGGCGCAA-CACCGTCG GCGGCG CGCCGGTGATTCCGCCA   GCGGTGATCTCGCGC  64 338
APY29_RS05935 1333330 .. 1333346 -  -4.3  -2.80344   CTGCTATCGAACAAG              TGCCGCG CTG CGCGATA              TCGCCACATCAGGCA  42 66
APY29_RS05930 1331317 .. 1331341 - -15.7  -3.23216   CGGCACTACGATGAA          GATCGCCAGCG CCA CGCAGGCGATC          GGTATCCGCGATTTG  80 350
APY29_RS05905 NONE
APY29_RS05900 NONE
APY29_RS05895 1324876 .. 1324888 -  -7.7  -4.40358   AGGTATGGCAGAAAA                TGACG CCT CGTCA                GACCTTGCTTGGCTC  81 359
APY29_RS05890 1320195 .. 1320205 -  -5.4  -3.01712   TTTGTTTTCTGAACA                 TCCT GCC AGGA                 TGAGGGTGGTAAATA  47 56
APY29_RS05880 1317854 .. 1317864 -  -2.4  -3.66643   CAAACCAAACCAGAA                 CGCC TAC GTCG                 AATCGTTCAACGGCC  51 286
APY29_RS05870 1316174 .. 1316211 -  -6.1  -3.35522   CAATGCCGTCAAATA   CACCCAGGACGGCCAGG TGCG CGTGCGCGTGCTGGGCG    ATGCAGTGGAAGTGA  55 346
        glgX 1310164 .. 1310200 - -20.2  -4.43477   TCCACCGAAGCAAAA   CGCGTGCTGCCTCTCCG ATGC CGG-GAGGCAGCGCGCG    TTGCTCCTGATTGCG 100 57
APY29_RS05820 1306949 .. 1306994 -  -2.4  -3.20382   CCGTAGAGGCACGAA TGGGCGCGCGGGGTGGGGAGCC GGAC AG-TGCCC-CCCCGTCCGCCAA CGACGTGAGCTTGGC  43 265
APY29_RS05815 1306367 .. 1306389 -  -4.8  -2.74443   CTGACAACAACCAAT           GGTGTTGTCA AGA TTACATCACC           CACGCCCGTGTAGGG  44 42
APY29_RS05810 1306069 .. 1306083 -  -9.2  -2.62184   GTTGTCCTCACAGTA               GGGCCA CAT CGGCCC               AAAAATCATCGGTCA  56 3
APY29_RS05805 1305599 .. 1305619 - -18.3  -4.08485   TCCACTGAAACCAAA            GAGCCCCGC ACT GCGGGGCTC            TTTTCGACAGGATGC 100 82
APY29_RS05800 1304227 .. 1304239 -  -2.6  -3.66356   AGTTGGAATCCCAAA                CGCA TCTAT CGCG                TTTACAAGGCCATGA  51 174
APY29_RS05765 1296968 .. 1297024 - -14.3  -2.71731   GTCATGCGGCAATTA TCACCGATCGGGCGCTGATGCGCCG GCCTGCG CGGCGCATCAGCCGCCGCCCAGCGC GTGCACGATTTCCAC  75 8
APY29_RS05760 NONE
APY29_RS05755 1295945 .. 1295960 -    -4  -3.68529   AGGTCATCAGCGAAA              CGGA-AG CCC CTCTCCG              ACCGGGGCGAGGAGG  56 1
APY29_RS05750 NONE
APY29_RS05745 1293213 .. 1293237 -  -5.5  -5.00884   AGCCGCTCGAAAAAA          GCGCAACGCCG AAT CAGCGCGCCGC          CCACCAGAACATCAG  85 14
APY29_RS05735 1292226 .. 1292274 -  -8.8    -3.767   CAGGCATCGAGCAAA CCCCGGCACCTGCTGCGCAGGCCG AGA CGG-CGGCGCAGCAA-TGCAGGCA GCCAGGTGTCAGTGC  69 34
APY29_RS05725 NONE
APY29_RS05720 1290510 .. 1290539 -  -7.7  -2.70298   GGCTCCAACGACAAG       GGGACCCCGAGCT TATC AGCGCGCCGTCCC        TCGTCTGCGTGCGAA  52 97
APY29_RS05715 1288806 .. 1288818 -  -4.7  -2.70936   CGACCAATCACATCA                CGCAG TAC CAGCG                GCAGCTGCAGGTCAC  44 276
APY29_RS05710 1287314 .. 1287359 - -11.2  -3.08679   TGCGCTGATGCAAGA CACTGATGTGCGGCACGGCGCA TCCC CGCACCGTGCCGCA-A-CTGCG GTTCTCCTCGTTCCT  66 329
APY29_RS05695 1278456 .. 1278466 -  -8.2  -3.40867   TCAGGCACGAAGCAA                 GCGC GAT GCGC                 TAAGCGGATGCCATG  63 126
APY29_RS05690 1276732 .. 1276761 - -13.5  -2.52543   AGTTGCCCTAATCGA       TCGCGCGCGCGCA ACGG TGCGCGCGATCGA        CCCAACGCAACTCGA  71 42
APY29_RS05665 1269682 .. 1269693 -  -2.2  -2.66873   AGCGGCATTAAATAT                CCGA TGCG TCGA                 CAAAAGAAATGCCGC  38 6
APY29_RS05660 1267712 .. 1267732 -  -3.3  -3.45737   CAAGCAGGATCAGAA            GGTTGCA GCTCTTT TACAACC            GTCCGTGATATCGGG  49 51
APY29_RS05650 1265961 .. 1265975 -  -7.1   -2.9732   GTTGAACCTAAAGCA               CGGCA TATTG TGCCG               CTTAGGATATCTACG  51 66
APY29_RS05625 1256433 .. 1256461 -  -5.2  -3.61517   AGTTGGTCGGAAGAA        CTCGGACATGGG CTCTT CCCATTCCCGAT        TCCCCACTCGCGATT  55 48
        cysI NONE
APY29_RS05615 1253543 .. 1253553 -  -4.6  -3.13403   CCTGGGGCAGCAATA                 CGGC ACT GCCA                 ATCAGTTGATCCTGT  47 419
APY29_RS05595 NONE
APY29_RS05590 NONE
        cobA NONE
        cysK 1243561 .. 1243577 - -15.1  -4.56775   AGCCGTGGCCAAAAA              GCCGCGC ATT GCGCGGC              TTCAGGTCTGGTCAT 100 54
APY29_RS05565 1242722 .. 1242744 -  -4.6  -2.52543   ACGGGGTGGAATGCA           TGCCGTCCCG TGT CGGGCCGGGC           GCTCTCTTGGAGCGA  43 84
APY29_RS05560 1241966 .. 1241995 - -17.9  -4.07885   GATGCCGCGCGAAAA       CGCAAAGGGCGCC GCTC GGCGCCCTTTGCT        CAATCAACATCGCTC 100 96
APY29_RS05500 NONE
APY29_RS05495 1228369 .. 1228383 -  -2.7  -2.87931   GGTAGGTCGGACAGA               CGGGC GACGT GACCG               ACCTGTCCGCAACTC  40 102
APY29_RS05490 1227638 .. 1227650 -  -9.1  -3.53012   CGGGTTTGCGCGAAA                TGCGG CAA CCGCA                GCATCCGCGTGGGGT  65 105
APY29_RS05485 NONE
APY29_RS05480 1225805 .. 1225826 -  -8.7  -2.78463   AGGGCCCCGATCATA           GCGGCTACGC GAT GCGCA-CCGC           GTGGCGAGCCGGCGC  54 44
APY29_RS05475 NONE
APY29_RS05470 NONE
        modC 1223375 .. 1223391 -  -5.1  -3.06796   GCCGACCTCATGCAA              GCGGT GCGTACT ACCGC              GCTGCGATGGCAGTT  47 310
APY29_RS05445 1219110 .. 1219122 -  -9.1  -3.59738   CAGCACAGCCGGAAA                GCGAC GAG GTCGC                CATCATCACGGCCCA  68 129
APY29_RS05440 NONE
APY29_RS05435 1216119 .. 1216148 -  -9.3  -3.36878   GCTATGGACGTACAA       CCA-CGAGCGCC CGAATAT GGCGCTCGGCGG       CATCACGCCTGCCAT  63 102
APY29_RS05425 1214239 .. 1214255 -  -8.7  -3.47227   TGTCAATGATGAGAA              TGCCAAG CCG CTCGGCA              TGGTGACGGCAGCCG  60 336
APY29_RS05410 1209790 .. 1209805 - -11.8  -5.27335   TGCTTGAAAGAAAAA              GCCGGC GAAA GCCGGC               TTTTTTGTTGGATTT 100 89
APY29_RS05330 1189709 .. 1189747 - -14.8  -4.15044   TCGGGGGCCAAGAAA  TTGGGGAACCGAACAGC CACGCC GC-GTTCGATTCCCCAA   TCCCGATTTCCGAAT 100 50
APY29_RS05325 1188535 .. 1188561 -   -18  -3.54424   GCGTATCTGCGTAAA         CGAACGCCCCGC ATT GCGGGGCGTTTG         CATTTGGACGGTTGC 100 235
APY29_RS05275 NONE
APY29_RS05270 NONE
        rdgB NONE
APY29_RS05260 NONE
APY29_RS05255 NONE
APY29_RS05250 1172282 .. 1172292 -  -2.4  -3.75629   GATCGGCAATGCAAA                 GGCG ATG CGCA                 GTTTGCCGCAATCCC  52 197
APY29_RS05245 NONE
APY29_RS05240 1170294 .. 1170318 -  -7.7  -3.09516   GGCGTCATGACGTAA          GCCGCAGGCGC AGC GCAATTGCGGC          AGTCGTGCCGTGGCG  54 104
APY29_RS05225 NONE
APY29_RS05220 NONE
        ssrS 1167293 .. 1167318 - -17.7  -4.61231   TCAGACGCGCAAAAA         GAAACGACGCC CGAA GGCGTCGTTTC          AGATTTGCATTCTCC 100 32
APY29_RS05210 NONE
APY29_RS05205 1165939 .. 1165955 -  -2.9  -2.73542   CCCAATCCCGAATCA              CGGCTAT TCC ATCGCCA              GCAACACTTTCCACT  40 12
APY29_RS05200 1165028 .. 1165057 -  -5.8   -2.6737   AACGAACACAACGCA       TGCGGCATACC AACTGGCAA GG-ATGCCGCA       CCATCTGCCAAGCGG  46 159
APY29_RS05195 1164447 .. 1164457 -  -2.4  -3.14344   CATGGGCCGCATGAA                 TGCG TAA CGCT                 GACAGGCGGCGCTGC  43 147
APY29_RS05190 1163366 .. 1163392 -  -7.3  -3.61328   AGGAAGACTTCGAAA        TGGTGG-AGCTC GACT GAGCTGCCGCCA         ACGGCGTGCAATCAG  62 161
APY29_RS05180 1162221 .. 1162242 -  -3.6  -3.48064   GCCATAACGAAGCAA           TCGGCAGC AGCGTG GCCGCCCA            TGCAATGACCCGCTC  49 264
        hemL 1156781 .. 1156792 -  -7.2  -3.16668   CAACATTCTGAGCAA                CCGC AAGT GCGG                 CACGATCACGCGCAC  56 110
APY29_RS05160 1153550 .. 1153566 - -12.3  -3.59262   CGCCACACGTGCAAA              CCTGCGT TGA ACGCAGG              ATACATGCGGATCTG  75 43
APY29_RS05125 1145407 .. 1145429 -    -9  -2.70932   TCTGGCGGCCAAGCA           TGGCCTGCTG CTG CTGCAGGCCG           GCCCGGATGTGTTGC  55 319
APY29_RS05115 1143318 .. 1143345 -    -9  -3.18264   CGCGCTACCGAGCAA        CGGCCGCGTCCGC CTG GCGG-CGGCGCCG        TGGTGTTGGCTGCTC  61 48
APY29_RS05100 1139296 .. 1139321 -  -4.8  -2.92463   GTCACCATCGAGACA         GGGT-TCAACA GCTGT TGCTGACACCC         CATCTCGACCCATCG  46 76
APY29_RS05075 1133076 .. 1133100 - -21.5  -2.72344   CTGCATCCGTAACGA          CGAACCCCGGC CAG GCCGGGGTTCG          CTTTCAGTGCATGCA 100 220
        hppA 1128788 .. 1128801 -  -2.3  -2.75844   CTGGTCAGCGCAAAT               GACCG GGTC CGACC                GCGCCCTTATTGGCC  39 156
APY29_RS05050 1127309 .. 1127325 -  -9.4  -2.59431   CTTCCCCAGAAGTCA              CCGGTG ACAGA CACCGG              CCAAACGCTTTCGGC  56 138
APY29_RS05045 1126128 .. 1126143 - -11.8  -5.25803   AAGCGGCATAAAAAA              CGCGGC CCTG GCCGCG               TTTTTTTCAGGCACG 100 56
APY29_RS05020 1116666 .. 1116702 - -10.9  -2.90075   TCCCCGTGAATGACA   CCTGCAT-GCGTGCGG TGTCTT CGGCACGCCACGCAGG    CTTAGCGGGAATTTA  64 27
APY29_RS05015 1113605 .. 1113623 -   -16  -5.93809   CCCGGACAAAAAAAA             GCCGCCGA AGA TCGGCGGC             AGGGAGAGAGAGCAG 100 214
APY29_RS05000 NONE
APY29_RS04995 NONE
APY29_RS04990 1106228 .. 1106249 -  -2.1  -3.26712   ATCCGGAAGAAGACA           CCTCCGGAC AGCA GTCTGATGG            TCGCGCGAGGTCTGC  45 45
APY29_RS04985 NONE
APY29_RS04980 1103452 .. 1103488 -  -8.7  -4.65895   GTTCGCATGCAAAAA   CCGGAACGGCCAGCAG ATCACG CTGCTGGCCGTGA-GG    CTTGCATCATCTGCC  86 53
APY29_RS04960 1098688 .. 1098737 -  -5.6   -3.9461   TGTGGCGAAGAACAA TCGCGGCATTGCCGGCCGGGC CGCGGCATC GCCGAGTCAGCAA-GCCGCGT GTGCATGACGCATCG  62 129
APY29_RS04950 1094713 .. 1094723 -  -2.4  -3.73775   GTCATCGCCACCAAA                 GGCC GGG GGCG                 CTCAGCGCGGCGCAT  52 27
APY29_RS04945 NONE
APY29_RS04940 1092498 .. 1092513 - -11.8  -5.60993   TCGCGCACAAAAAAA              GCGGGC CTGG GCCCGC               TTTTTTTGTGCATCC 100 49
APY29_RS04930 NONE
APY29_RS04925 1089648 .. 1089676 -  -6.6  -3.14132   CGCGCGCCGCAGTAA       CGCGGTG-CGTAC GGGT GATCGGCACCGCG        TCGGTGTGCGAGCGT  53 88
APY29_RS04905 1083291 .. 1083301 -  -2.4   -4.7254   AGGCGCGAGTAAAAA                 CGCG TGC CGCT                 TCTAGTTTCACCAAC  72 82
APY29_RS04890 1077536 .. 1077573 -   -20  -3.04322   GGCAAGCGCCGAATA   CGACAACGGCCGCACCC GTGAT GGATGCGGCCGT-GTCG   AATGCCTGTTGCGAT 100 138
APY29_RS04880 1074657 .. 1074678 -  -7.9  -2.63913   GAGCACGCGAGAGGA           CGCTGGCAG CGCG CTACCCGCG            CCGCATCAACATCTG  51 17
APY29_RS04875 NONE
APY29_RS04870 1072183 .. 1072193 -  -6.8  -3.53012   GTGGGGCTGCTGAAA                 CGTC GCG GACG                 CACGCTGACACCGAC  58 84
APY29_RS04860 NONE
APY29_RS04855 NONE
APY29_RS04850 1068802 .. 1068822 -  -5.3  -4.59773   CGCGATCCTGAAAAA            GCTCGACTG CTA CAGCCGCAC            CCAGGCCGCGGTGTT  77 299
APY29_RS04825 NONE
APY29_RS04820 NONE
APY29_RS04815 1061829 .. 1061844 -  -3.2  -3.78329   CGTCAGGAATCGAAA              CGACTGC ATA GC-GCCG              CCCTAGCGATTCCCC  54 69
APY29_RS04810 1060782 .. 1060796 -  -2.7  -2.78816   TCAGTTCGCACTAGA               GGCGG GTCGT CCGCA               CGGTGGCGACTGCTT  39 205
APY29_RS04805 1059212 .. 1059230 -    -3  -2.70932   CTTCGGTCCCAAGTA             CACGCATG CGG CCTGCCTG             GTCGCCGCCGGTATC  40 499
APY29_RS04795 NONE
APY29_RS04790 1053444 .. 1053480 - -19.4  -3.05384   CCCTTCGGGACTCAA    GGCATGGCCCGCGCGC TCCTG GTGCGCGGGCCATGCT    GCGCTTGCACTAGCT  91 112
APY29_RS04765 1043234 .. 1043258 -  -9.9  -3.14602   TGCACGGCAGCAACA          CCATCGCCGTC GGC GGCGGCGACGA          TCTGGTTCTGGGCGG  62 520
APY29_RS04755 1042556 .. 1042585 -  -9.3  -3.36878   GCTATGGACGTACAA       CCA-CGAGCGCC CGAATAT GGCGCTCGGCGG       CATCACGCCTGCCAT  63 190
APY29_RS04745 1040017 .. 1040030 -  -3.1  -4.48072   AGATCGACGAGAAAA               TCTCGC AAA GCG-GA               TTCATGGCTAGGGCC  69 287
APY29_RS04720 NONE
APY29_RS04715 NONE
APY29_RS04710 1032347 .. 1032362 -  -4.6  -3.28745   TTTTCAACAAGGCAA              CCAGCG GACT CTCTGG               GGCGTGGGGCACCAC  50 236
APY29_RS04705 1031602 .. 1031656 -  -9.9  -2.72049   GACACGCCGCAAGTA CGTCCGT-GTAGGCTCTTACGCGGCA TCCA TGCCGCGTAAGGTCCCGCGACGGTGG GCGGACAAGGACCAG  60 477
        grxD 1026924 .. 1026944 - -14.7   -5.1675   CGATCCATGAAAAAA            CGGACGCTC AGG GAGCGCCCG            TTTCGGTATGCGGTG 100 164
APY29_RS04685 1025866 .. 1025897 -  -6.7  -3.01712   TTTGCCGGTTGAAGA     CCG-GCATCGGCCAT CTGC AT-GCCGATGCTCGA      AGTCTGCTGCGCAGC  51 144
APY29_RS04675 1023751 .. 1023774 -  -3.7  -2.57211   ACGCGGGCGCACAAC          GGTTGCGCG GCTCAT CGTGCCACC           TCCTGGCCAAGCATG  41 13
APY29_RS04670 1022474 .. 1022508 - -14.3  -3.14132   GTGGCGCTTGAGCAA     CCACCGCACGCCTAC TTCAG ATAGGCGCGCGGCAG     CGGGCCGGCCTGCTG  80 2
APY29_RS04665 NONE
APY29_RS04660 1021530 .. 1021559 -  -5.7  -3.33815   AGTGTCCGGAAGCAA       GGCATGGTCGCG ATGCGTG CGCG-CGATGCC       AGGCGAGTGCTGAAG  52 332
APY29_RS04655 1019698 .. 1019710 -  -7.7  -2.72344   TCGGATTTCGAATGA                GCTCA CGG TGAGC                GATGTGCATGGATGA  52 221
APY29_RS04645 1017155 .. 1017166 -  -2.2  -3.21416   GACGGCCATCAGCAA                GCTGC TTG GC-GC                GGTGCCCTCGTCGCT  43 136
APY29_RS04625 NONE
APY29_RS04620 1013312 .. 1013337 - -16.9  -4.08706   GCGGCAGTAGACAAA         CGAACGGCGCC TTCC AGCGCCGTTCG          CATCGCTTCACATCA 100 53
APY29_RS04575  999861 ..  999886 - -13.3  -2.91144   GCAGCGCTGAAATGA         CCGCTGC-GGCG CAA CGCCTGCAGCAG         TTGGGTCAGCGCGTG  69 445
APY29_RS04540 NONE
APY29_RS04535  989857 ..  989869 -  -9.1  -2.82015   TTCAGACGTAGGACA                CGACG CAT CGTCG                TCCACGAGCACAGGC  57 154
APY29_RS04530  989175 ..  989207 -  -8.4  -4.09628   GATGGTAAAGAAGAA     CGCGCGCGCAAACCG CGAC CGGCTTA-GCGTGCG      ACAGCCAGGTTCTGG  73 16
APY29_RS04525  988164 ..  988195 -  -6.5   -4.2828   TGCCATCGAGCAAAA      GACGCAACCACCG CTCGCT CGACAGTCGCGCC       TCGTCGATGCCCGCC  73 194
APY29_RS04425  954170 ..  954182 -  -3.3  -3.05816   CGACGCGCCACGGAA                CGCTT CAC ACGCG                CCTCAACGTCCATAA  43 60
APY29_RS04420  953800 ..  953821 -  -5.7  -4.08216   TGAGGCGCTGGAAAA           GCGTGCCGT GAGC ACGGCGGGC            GGCAGCCGCTGAGGC  65 167
APY29_RS04410 NONE
APY29_RS04405  952257 ..  952268 -  -7.2  -3.61398   GCTGGCCGCGAACAA                GCCG GTGG CGGC                 GGTGGACGGGCAGGT  58 282
APY29_RS04395  950721 ..  950734 -  -2.3  -3.07816   GTCGCATGCATCGAA               GATGC GGGA GCTTC                GATAAGAAGCTTGTG  41 55
APY29_RS04375 NONE
APY29_RS04370 NONE
APY29_RS04365 NONE
APY29_RS04360  942216 ..  942245 -  -2.1  -3.59262   CGGCACATTTCCAAA       CT-CACCGAGCAAT GCG ATGACGCGGTGGAG       TTTGCGGTGTGTTCT  48 523
APY29_RS04350  937159 ..  937178 -   -15  -3.31461   CACCTAGTTGCACAA            CGCCCGCA GTGA TGCGGGCG             TTATGCGTTTGGCGT  82 257
APY29_RS04325  932850 ..  932862 -  -4.7  -3.14132   TGCTCGCGGCACCAA                GGTGC TTG GCTCC                AGCCCGGCGGCGGGA  48 72
APY29_RS04320  930811 ..  930832 - -10.1  -3.86194   AACCGGTGTGACAAA           TGCGCCGAA ATAA TTCGGCGCT            TTGTGTTCATCCATT  76 63
APY29_RS04315  930233 ..  930249 - -15.1  -5.06816   ACCCTGCAATAAAAA              CGCCGGC ATG GCCGGCG              CTCTTATTGGTTTGA 100 42
APY29_RS04305 NONE
APY29_RS04300 NONE
APY29_RS04295 NONE
APY29_RS04290  924875 ..  924904 -  -7.2  -3.96624   CAGCGCCACTACAAA      CACGCGTTGCCGCGC ACG GCGCGGC--CG-GTG      GGGGAACGGATCAAT  66 292
APY29_RS04280  922570 ..  922594 - -15.7  -3.34517   ATCGCTGCTTAAATA          GCCAGGGGCCT GTC ATGCCCCTGGC          TTTTAGAGATTCTGG  84 28
APY29_RS04265 NONE
APY29_RS04260  918219 ..  918243 - -17.1   -2.6063   GCCATGGATAACGCA          GGACGGCGGCC ATA GGCCGCCGTCG          ATATTGCAGTCTACG  83 54
APY29_RS04230 NONE
APY29_RS04225  911040 ..  911051 -  -5.8  -3.15544   GCGCAGCTTCACCAA                CCTG GCCG CAGG                 TCGAATCCGGCCCGA  51 102
APY29_RS04220 NONE
APY29_RS04215 NONE
APY29_RS04210 NONE
APY29_RS04205 NONE
APY29_RS04200  905403 ..  905418 -  -3.2  -3.61398   GTTCCCTTCCAAGAA              TGAACC GATA GGCCCA               GGTAACAGCTTCATC  51 126
APY29_RS04195 NONE
APY29_RS04190 NONE
APY29_RS04185 NONE
APY29_RS04180  901932 ..  901961 -  -9.3  -3.36878   GCTATGGACGTACAA       CCA-CGAGCGCC CGAATAT GGCGCTCGGCGG       CATCACGCCTGCCAT  63 95
APY29_RS04105  882086 ..  882104 - -10.2  -3.34517   AGTCGCCCTGAAAGA             CCAGGGCC AGC AGCCCCGG             CGCCGCGAGATCGCC  66 61
APY29_RS04085  878268 ..  878285 - -14.1  -4.72272   TGCGCCCACGAAAAA             GCCGCCC CGAA GGGCGGC              TTTTCAGTTCAACGC 100 74
        queD  872373 ..  872390 - -14.1  -3.32769   TCCGGAAACGACGAA             GCCGCCC CAGC GGGCGGC              GTCAGGTCACACAAG  77 53
APY29_RS04060  871809 ..  871836 - -12.8   -5.4833   GCAGGCAATAAAAAA        GCCCGACAGA GGGAGGGA TCTGTCGGGC         CGGATTGCACGGGGG 100 78
APY29_RS04050 NONE
APY29_RS04045  869753 ..  869767 - -11.4  -3.14931   GTTACCGGGCATCAA               GGCCGA CTA TCGGCC               GCTTCCCGGTCTTAC  66 140
        fabA  863426 ..  863440 -  -4.2  -2.71364   CCATTCCGGTAATGA               CGACGC GAC GCATCA               GAAATTCTCCGTTGA  42 23
APY29_RS04015  861788 ..  861806 -  -2.3  -3.03781   TGAACGGAAACGACA             GCACCCG TGTGG CGTATGC             ATCGGCGGCGGCCTG  41 449
APY29_RS03995  857230 ..  857249 - -12.8  -3.10905   GCACAACTGAGGGAA            CCCGCGCA AGCA CGCGCGGG             GCCGAGGACGGCCAA  71 58
APY29_RS03990 NONE
APY29_RS03985 NONE
        gloA  853543 ..  853559 -  -2.1  -3.05384   GGGGCTTCGAGGCAA              GGGACGC GTC GCGTTCG              GCATTGGTATCGGCT  41 92
APY29_RS03975 NONE
APY29_RS03970  850555 ..  850571 -  -7.9  -3.40371   TATTGCACCAATCAA              CCGACGC TGC GCGTCTG              GCTACGTTGTTGCTC  60 5
APY29_RS03965  849040 ..  849062 -    -4  -3.20382   GCCTATAGCGACGAA           TGTGCAGCGA AAT TCGCCGAGCA           GTTGCCGCAGTGGTT  45 195
APY29_RS03955  847085 ..  847114 -  -5.7  -2.62389   CAAGTTATGCATAAG       CTCCTGGCGAGG GTCCACA CCACGC-AGGAG       GACGTATGCACGAGT  46 524
APY29_RS03940 NONE
APY29_RS03935 NONE
APY29_RS03930  841353 ..  841376 -  -8.8  -2.84803   TGAAGATAGGAAGCA          TGGCTCGCCGC GGT GCGGCGGGC-A          GGAGGTTCAGGACGA  55 32
APY29_RS03925  840041 ..  840075 -  -2.8  -2.84617   GAGGGTAAAAACGCA    CGGTGGATGGCGAGC CTGGTT GCTCCCCAT-CGCCA     AGTGACGGGGAATCA  42 51
APY29_RS03920  839469 ..  839490 -  -5.7  -3.37622   AACACGCAGCGACAA           CGCGCCGCT CGGC AGGGGTGCG            GCAGATCGTCGAGCG  52 106
APY29_RS03915 NONE
APY29_RS03910  836598 ..  836615 -  -2.6  -4.24342   CGGCCGACCAAGAAA             TCGCCG TAGCGG CTGCGA              CTGTTCTCTGCGCGG  59 119
APY29_RS03900  834685 ..  834697 -  -9.1  -2.78018   ACGGCCGAGCAATTA                CGCAG CGC CTGCG                CATGCATCGATCAGC  57 36
APY29_RS03845  824609 ..  824641 -   -15  -4.09685   GCGCAGCCGTTAAAA     CGACAGAACCCCGCA TCGC TGCGGGGTTCTG-CA      TGAAGCTGTCTTCGG  93 65
APY29_RS03810  817345 ..  817362 - -12.7  -6.15828   TTGATCAAAAAAAAA             CAGGCCC TTGC GGGCCTG              TTTGGTGGAAGTGCT 100 57
APY29_RS03805 NONE
APY29_RS03800  815752 ..  815768 -  -7.9  -3.10641   GAACGCACCACGCAA              GGCCTGT TTT ACCGGCC              CAATCTGTGGCTGGT  54 319
APY29_RS03790  814953 ..  814982 -  -9.3  -3.36878   GCTATGGACGTACAA       CCA-CGAGCGCC CGAATAT GGCGCTCGGCGG       CATCACGCCTGCCAT  63 95
APY29_RS03780  812880 ..  812899 -  -6.4  -3.85698   GCGCGCGTGCAGAAA            CTGGCCAA AGCG CTGACCAG             CCCGGAAGTGAAAGC  62 121
APY29_RS03755 NONE
APY29_RS03750 NONE
APY29_RS03745 NONE
APY29_RS03740  805512 ..  805532 -  -6.7  -3.14564   CGACGCTGCCAGCAA            GGCGGCAGG TTT CTTTCCGCC            ACGCACGCAGACCAG  53 48
APY29_RS03735 NONE
APY29_RS03730 NONE
APY29_RS03725  803384 ..  803399 -    -6  -3.01712   CCTGGTGCTGGAAGA              CTCGCC CACC GGCGTG               CGTGCAGCATTGGCG  49 255
APY29_RS03705  800543 ..  800558 - -11.8  -3.92996   CGGTAGACACAAGAA              CCGGGC AAGA GCCCGG               TCTACCATGGCGCGG  81 148
APY29_RS03675  794657 ..  794676 -   -15  -5.03994   GCCGACAGACAAAAA            CGGCGCGT TGCC ACGCGCCG             TTGTCATTCGAGGCC 100 75
APY29_RS03660  791285 ..  791315 -  -7.4  -3.19602   TGCTGGATACCAAGA       CCGGCCGCTACTAC GAC GCGGTACCGGCGGG       CGATGGCATGCGCGT  56 107
        msrB  790119 ..  790152 -  -5.1   -4.4009   CCTCAGCGCACAAAA     GCGCAGGGAGGCGTT GTCG AGCACCTCCAGGCAC      TGCAATGGCACCTCC  71 81
APY29_RS03645 NONE
        motA NONE
APY29_RS03635 NONE
APY29_RS03630  786643 ..  786655 - -10.5   -2.9914   CATCGTCGACATAGA                CGGCC ATC GGCCG                GGTCAGGCCTTCTTG  62 28
APY29_RS03625  786294 ..  786306 -  -6.9  -3.28712   GGCGCGCTCCTACAA                CGGCG AGC CGCCA                ATCAGGTTGCGGCCA  55 84
APY29_RS03615  784605 ..  784631 -  -2.9  -2.73771   GGACACGCCGTAAAC        CCGCAAGCGGTG AGGA CACCGCAC-CAG         ACAGTTTCCCGGCGG  40 224
APY29_RS03590  780416 ..  780427 -  -3.6  -3.23853   CCGTTCCAAGGAACA                GCAG CACA CCGC                 AACGTCCCATCCATG  44 232
APY29_RS03585  779128 ..  779148 -    -9  -5.42862   ACACCGGCAAAAAAA           GACGCGTGC AAGG GCACGCG-C            ACGGTGTCGGAGAAT 100 477
APY29_RS03560 NONE
APY29_RS03555  772842 ..  772886 -   -26  -2.52896   CCACGCGCTAACGCA CAGCCCGCGCAGATCGGCAAGC CAT GCT-G-CGATCTGCGCGGGCTG GTGTGCGGTGCAATC 100 39
APY29_RS03550 NONE
APY29_RS03545  771379 ..  771394 -  -3.2  -2.95409   GAATCACGAAGGACA              GCATGG GGCA CGATGC               GTGTGAGCGGCAGCC  42 146
APY29_RS03540  770598 ..  770630 -  -3.4   -3.7108   ACTCGTATACCTAAA      CAGACAGCACAG TGTAGTGGC CTGCGGTGTCCG      GTGCCGCCTCGAGGG  54 82
APY29_RS03535  768116 ..  768131 -  -8.2  -3.06183   CGCACTGCCAGGCAA              CGCGCG CAGG CGCACG               CATCGGCACGGTTGC  55 363
APY29_RS03525  766110 ..  766133 - -18.2  -4.35524   TGTTGAAACGCAAAA          CGGCCGATGG AGTT CCATCGGCCG           TTTTTTGCATTCGAA 100 76
APY29_RS03495 NONE
APY29_RS03490  759018 ..  759034 -    -3  -3.24747   GGCCGAGACCATCAA             CGG-CTT GTAT AAGACCG              AACTGATCCACCGCC  46 271
APY29_RS03470  756753 ..  756777 - -21.5  -2.56095   GGGATATGCAAGCGA          CGCAGGACGGC GGT GCCGTCCTGCG          CGGTGACTCAGGCGG 100 33
APY29_RS03465  755694 ..  755717 - -13.1  -4.87291   CAGTGCAATGAAAAA          GCCCGGAGC GTGATG GCCCCGGGC           TGGTGACGGGTGCAA 100 56
APY29_RS03460  755216 ..  755232 - -15.1    -4.015   GCAGCCACGAAAGAA              GGGGCCC AGC GGGCCCC              TCATCGTTTTGGTAG  95 120
APY29_RS03440  749922 ..  749940 -  -6.6  -3.54935   CAAAGCCGCTGGAAA             CGCTGCGC ACG GCGCATCA             GGCCGCTGTCGAACT  56 125
APY29_RS03420  747696 ..  747710 -  -7.1  -2.61216   GCACCAATCAAGCGA               GCCCA ACCGG TGGGC               GCATCATCCTTGGCG  48 29
APY29_RS03415 NONE
        cydB  744889 ..  744920 -  -2.2  -4.62783   GACGGATCGGAAAAA      CGCTGAAGCAA-GCC GCT AGCATCGCTGGAGCG      CCCGCCACGCGGGCG  68 106
APY29_RS03395  742753 ..  742781 - -21.8  -5.06414   GTGGCCCAATAAAAA        GCCCGCGTCGCT CGATC AGCGACGCGGGC        CCGGCAACAATGCGA 100 46
        galE  741183 ..  741197 -  -4.2  -3.72576   TGCCCTCGTAGGAAA               GAAACG GGT CGTTGC               GCATTACACGCGGGA  56 29
APY29_RS03385 NONE
         glf  738757 ..  738786 - -19.3  -3.29511   GCGATGCGTCGATAA       CTGCCCTGCAGCG ACGG CGCTGCAGGGCGG        GGCGTACGTTGTCAG  93 37
APY29_RS03375 NONE
APY29_RS03370  735280 ..  735292 - -10.5  -3.76373   TCTGGAACATGCAAA                GGCGC TGC GCGCC                AAGCAGGGCCGGCCC  74 518
APY29_RS03355  733214 ..  733247 - -17.5  -4.37658   AACGGCTGTACAAAA     CGCAGACGGCGCG GCCGAGAT CGCGCCGTCTGCA      TATGCGCCACTCATG 100 44
APY29_RS03345 NONE
APY29_RS03340  731687 ..  731725 -  -2.3  -2.94099   GCCCTGCATGAGATA  GCTGCTC-GCTTAGGCGCC TGC AGTGCC-ATGCAGAGCTGC  AGCTGCCGTGATTGC  40 350
APY29_RS03330  730315 ..  730334 -  -3.4  -2.74192   GAGTTCTGAACATGA            CGTCCCAG TTAG CGGGTACG             AAGCGCTGCAAGCAG  40 14
APY29_RS03325 NONE
APY29_RS03320 NONE
APY29_RS03315  726220 ..  726261 -  -3.5  -3.35798   AGTTCGCAGCCAGAA GCGTGCAGCGACGTCATGCT CAC AGCGGGGCCCCGC-ACACGC GATGCCGGGATGCAT  46 98
APY29_RS03290 NONE
APY29_RS03280  717656 ..  717671 - -11.8  -3.05596   CACGCCGTGACCCAA              CCCGGC ACAG GCCGGG               CTGGGCGTCATGCCG  68 56
APY29_RS03275  716572 ..  716615 - -10.9  -3.03771   GGAGAGCGCCGAACA CGGCGTGTCG-GGCTAGCGC ATGCA GGGCCCGCCGCGACACGCTG GGTCCGTGCGCTCAC  66 37
APY29_RS03265 NONE
APY29_RS03260  714528 ..  714552 -  -9.9  -2.82623   CGCGTTTGACAACGA          CGCCTGTGTCG CTA CGACGCAGGCC          CTGGGCGTGGGGTCG  60 63
APY29_RS03240  712967 ..  712981 -   -10  -2.50443   CGACACCCTAGGAAC               CCATCG GCG CGATGG               CGCGCGGCTGCAGCT  56 3
APY29_RS03130  686667 ..  686687 - -10.3  -2.67803   CGGTTACCAAAGCTA            CGCACTCGC CAG GCGGGCGCG            GCCGATGCCCGGAAT  59 184
APY29_RS03115 NONE
APY29_RS03110  684711 ..  684745 -  -9.9  -2.90723   CGATGCGCAAGCATA    GCCGGCTGCCCAGTGC AGGC GCACCCGGC-GCCGGG     CGCGTTATTGCGCGG  61 30
APY29_RS03105 NONE
APY29_RS03100  682277 ..  682289 -  -6.2  -4.08216   GGACTGCGCCGAAAA                CCGC TGGGT GCGG                TGTGGCGCGGGTTGC  66 369
APY29_RS03090  680086 ..  680111 -  -3.1  -4.05033   CGCAGTGGACAGAAA         CAGTTCCGCGGC CCG GCCGCAGC-CGG         GGTGATGATCGTGAT  59 379
APY29_RS03060  672592 ..  672620 - -18.2  -3.89524   AGGCTAGGCCACAAA       CGACGACGGCGCC CTCG GGCGCCGTCG-CG        TTGATGCATCGGATC 100 47
        dprA NONE
APY29_RS03050 NONE
APY29_RS03045 NONE
APY29_RS03040  668790 ..  668813 -  -8.9  -3.96148   TTCTCTTATTAGAAA          GATCACGGCG GGCGT CGCCGTG-TC          AAGCGGCCAGCGCCG  71 48
APY29_RS03035 NONE
APY29_RS03030  665495 ..  665506 -  -7.2  -3.31461   CAGGTAGGCCGACAA                GGGC GACC GCCC                 GGAACAGTCGGCATG  58 106
APY29_RS03025  664575 ..  664600 -  -6.8  -3.02144   TCATTGCGCCCAACA         GCGGCCAGCGC CTCAT GCGCCG-CCAC         AGTCGCGTTGCTGGC  51 12
APY29_RS03020  663857 ..  663872 -  -4.6  -3.72576   TCTTCTTTCAGCAAA              TGGCGA TTGC TCGCCC               GCCGTCCAGACCCGT  58 66
APY29_RS03010  662136 ..  662154 - -13.1  -3.36878   GTGATGCATCGACAA             CGCCGGC CATGT GCCGGCG             TTGTTGTTTCTAAAG  74 358
APY29_RS02995  657093 ..  657106 -  -9.5  -3.54741   CAGCACCTGGTTAAA               GCGCC AACT GGCGC                GTTGATCGCTCGCGC  68 219
APY29_RS02980  652807 ..  652819 -  -3.4  -3.12895   GCCCGCACTAATACA                GATC GATCG GATC                CACATCCAGCGACCA  44 5
APY29_RS02960  649085 ..  649100 -  -3.2  -2.50195   ATCCAGCAGGAACAG              GACAGT TGCC ACGGTC               AGGCCATCGCATCAG  39 74
APY29_RS02955  648437 ..  648455 - -17.4  -2.87344   GAGTGTTTGCACAGA             CGGCCCGG TTT CCGGGCCG             TCTGTCTATGTGGGG  87 52
APY29_RS02920  641754 ..  641805 -  -7.9  -3.09516   CCGGGCACGATTTAA CTGCCGGCGCATCATCGGGCGCCCA TTGC TGGACGCCCGCT--TGCTCAGGCGG CCGCGCCACCCAGGG  54 18
         rho  639652 ..  639668 - -15.1  -5.36441   GCCTCACACAAAAAA              GCCCCGC AAT GCGGGGC              TTTTTCGTCTCGATA 100 53
APY29_RS02900  636098 ..  636111 -  -8.1  -3.45945   CTGACCGAGAACGAA               GCCAC GATC GTGGC                CGAGCTCAACGGCGC  59 226
APY29_RS02870  628739 ..  628781 -    -4  -3.01712   TGTCCTTGCTGAAGA CGTC-AGGCGAAGCCGGCGC ATGCA GCGCCGGCG-CACATCGGCG ACGGAGGTTCCGTCG  45 55
APY29_RS02865  625383 ..  625399 -  -2.2  -3.99678   AGGGCCAGAACCAAA              GCCG AAGCCAAGG CGGC              TACCCCGCGTGTGCG  57 95
APY29_RS02860 NONE
APY29_RS02825  617123 ..  617135 -  -6.2  -3.44051   CCCGGATGAGTACAA                GGCG TTCGT CGCC                AAGCAGCAGGGTGGC  55 64
APY29_RS02795 NONE
APY29_RS02790  610937 ..  610953 -  -8.7  -3.15579   GGAATCGGCGAGCAA              CGCTGGT CAC ACCAACG              TTACAGCGCGGTCTG  58 81
APY29_RS02785 NONE
APY29_RS02780  608485 ..  608529 - -10.7  -3.60525   CCCATGCAGATAGAA GCGCAGCGTTGAGTGCACGC GGTTAG GCGTGCG-TGAGCGCTGCGC GAGCATGCCGCGAAA  73 156
APY29_RS02775  607871 ..  607894 -    -3  -3.30443   TGAGGAGTACATCAA          CGCAGCAG-GT TCG ACACGGCGGCG          TAGACCAGGCTTTTC  46 95
APY29_RS02770  607424 ..  607448 - -13.6  -3.05596   GATCGCGCGATGCAA          CAACGCCACC TTGAC GGTGGCGCTG          CCGTTTTTAGCGTTT  75 32
APY29_RS02760  605190 ..  605209 -  -9.2  -3.14344   CACGCGCGTCAGCAA            CACCGGCA AGGT CGCCGGCG             AGGAAGTGGTGCAGT  59 420
APY29_RS02740  600982 ..  601006 - -13.6   -5.1244   GGACCAATACAAAAA         GCCGGCGACGC TTGC GCGT-GCCGGC          TCTTGGGTTCGCTCC 100 91
APY29_RS02735  600250 ..  600267 -  -8.3  -4.13767   CCTTCCACTGGAAAA             GCCGCTC GGTG GTGCGGC              AGGCAGTGCCGCACT  76 118
APY29_RS02730 NONE
APY29_RS02725 NONE
APY29_RS02720  596930 ..  596940 -  -2.4  -3.55444   CGTTCACGCCTGAAA                 CGGC CCG GCGG                 TGCGCGATTGCCTTG  49 68
APY29_RS02715  595804 ..  595833 -  -8.5  -3.05463   ACTGCTGTTACGCAA       TGCGCAGCGGGCAG GCG CTGGC-GCGGCGCA       TCGTCAATGGCGCTC  57 29
APY29_RS02710  594073 ..  594102 -  -6.3  -2.78384   CGCGTTGCCAGCACA       CGGCAGAGCTGTG ACGA CTCAACTCAGCCA        ACTGGCGCACTCGCT  49 14
APY29_RS02685  589988 ..  590005 -  -7.7  -2.57931   TTCAGCCGCGACAAT             CACTTCG CTTT CGAAGCG              GCTGCGTGGTACTGG  50 184
APY29_RS02650 NONE
APY29_RS02645  580634 ..  580654 -  -6.1  -3.41878   GTTCGGAAGCGATAA            CCGCTGAAA GCA TCTAAGCGG            GAAGCGCGCCTCAAG  55 488
APY29_RS02610  571989 ..  572024 - -10.2  -3.97368   TGCCGAAGCCAGAAA    GACACGGCCGGCCAGC TTGT GCAGCCGGGCCGGGTC     CGTCAACTGGTCTTA  78 357
APY29_RS02605  570714 ..  570734 -  -4.5  -2.60512   GCGAATACGAAGTCA            CCGGCGGCC TGC AGCACCCGG            AGGTCGATGCGCTGG  42 132
APY29_RS02585 NONE
APY29_RS02580  566561 ..  566593 -  -8.4  -3.57144   CGCCGGATCGGGAAA     TGCC-GCC-CGCGGCG GTG CGCCGCACGGCCGGGA     TGACGCAAGCGCCGG  65 41
APY29_RS02575 NONE
APY29_RS02570 NONE
APY29_RS02565  564400 ..  564413 -  -4.5  -4.68655   CAAGCTCAAAATAAA               GGCTGC AGC GC-GCC               ATGCGTCTTCGCTCA  75 38
APY29_RS02555  562933 ..  562955 -  -3.5  -4.66163   AGGCTGAGCGAAAAA          GA-TC-GGGCA TTG TGCCCTGACTC          TCTGAGTCAGGCATG  69 326
APY29_RS02550  562164 ..  562175 -  -2.2  -2.91276   TGCTGGTCGAGAAAG                GACG GGTC CATC                 AGCGTTCCTGCACCA  40 24
APY29_RS02545  561479 ..  561510 -  -2.9  -4.07568   CGGCGTGTCCGAAAA      GCA-GGCATCAGCG GTCAG CGCTATCGCCACGC      CTCCGGCAATCTGCG  58 348
APY29_RS02540  560540 ..  560558 -  -4.4  -3.63073   CAGACCGGCGAAGAA             TCGCCGTT CGA ATCGGCGC             GGCTGTCGACCATCG  55 321
APY29_RS02520 NONE
APY29_RS02515 NONE
APY29_RS02510  553011 ..  553037 -  -6.4  -3.20573   GCACGCACAGCAACA         CGCCAGCGATAC GCC GCAACACGGGCG         TTTACTGCGCCTTGA  53 27
APY29_RS02505 NONE
APY29_RS02500  551596 ..  551612 - -15.1  -5.44119   GGGAGTTGAAAAAAA              GCCGCGC AAT GCGCGGC              TTTTCGATACTCGGT 100 119
APY29_RS02475  540714 ..  540753 -   -10  -3.40611   TCGACGCCAAGAAGA  CAGAAGTGCTG-GCGCGCT TAT AGCGTGCGCAGTACCTCCG  CGCATTGGTCGGCTT  68 388
APY29_RS02460  537727 ..  537764 -  -9.8  -3.89346   GGGGTAGTGCAGAAA   CACCGCGGCGCGCA TGGGGAATGG TTCGCGTCGCGGTG    CATTGCAAACACGGC  76 176
APY29_RS02440 NONE
APY29_RS02435  532755 ..  532807 -  -9.8  -2.70932   CGCGGCGGCGAATGA TATTGC-GCACCGGCACCGGCACCG GCAC CGGCACCGGCACCGGCACCGGCATA ACGTCCTGGCAAAGC  60 116
APY29_RS02430  531637 ..  531657 -  -8.9  -4.11906   ACAACGCAGAAAGAA            CGCGTCGGC GGC ACCGATGCG            GTGCCGATCTTCAAG  76 402
APY29_RS02420  529641 ..  529657 - -15.1  -3.71873   TGATCGACATCGAAA              GGCCGCC AAT GGCGGCC              TTTTTTGTTGCCGGT  90 42
APY29_RS02405  526163 ..  526181 -    -3  -3.27544   GAAAACCAGGATCAA             GCGAGC CAGCCCT GCGCGC             GGCGAGCAATCGTCA  46 505
APY29_RS02395 NONE
APY29_RS02390 NONE
APY29_RS02385 NONE
APY29_RS02380  522548 ..  522563 - -11.8   -5.4505   GTCTGCAACAAAAAA              GGCCGC TAAT GCGGCC               CTTTTCCATTCCTTG 100 49
APY29_RS02375  521191 ..  521201 -  -6.8  -3.34344   GCATTGGCCAAGGAA                 GTGG TGG CCAC                 GCGCAAGCAGCTGCT  54 388
APY29_RS02360 NONE
APY29_RS02355  518054 ..  518072 -   -16  -3.86311   ACATTGAAATGCAAA             GGAGCCGC TAG GCGGCTCC             GGGGAGGTCGGTCAG  95 37
APY29_RS02350  517360 ..  517392 - -17.8  -3.05384   GTGCTGCCCACTCAA      CGCAAACGCGCCAG ACCGG CCGGCGCGTTTGCA      GAGCGAGCGCTTGAT  90 48
APY29_RS02345  516250 ..  516303 -  -8.7  -2.86124   CTTAGGCAAATATTA GTGCATGGCCGAACCGAACGCA-GGC CAG GCCATGCATGCCGTTCGGCCCCGCTT GGTCAGGCCCTGCCC  55 43
APY29_RS02340 NONE
APY29_RS02335 NONE
APY29_RS02330  514045 ..  514067 -  -5.5  -3.53811   CGCACCTTGGCGAAA           GCGCGATAC GCCGT GCACCACGC           AATGGTGTCCGCATG  57 40
APY29_RS02325 NONE
APY29_RS02320  512822 ..  512855 -  -2.9  -3.89524   ATGCCACTGCACAAA     GCGCCCAACACGGTG ATGA CTCTGCACTGGGCGA      GAGGACTGCCCGAAA  58 102
APY29_RS02305 NONE
APY29_RS02300 NONE
APY29_RS02295 NONE
APY29_RS02290  508460 ..  508471 -  -7.2  -3.32997   TCTGCAGAAATGGAA                GGCG CAGA CGCC                 CATATCCGCGGGTTC  58 232
APY29_RS02285 NONE
APY29_RS02280 NONE
APY29_RS02275  504503 ..  504527 -  -4.1  -2.87564   CGATGCTGGTATATA          GCGATGCCGGC GGC GCACGCATCGG          TCTGTATCTGCGTCC  43 250
APY29_RS02260 NONE
APY29_RS02255  501318 ..  501369 -  -5.1  -5.07652   GCGGCCAAAACAAAA CGCCAGCAC-TAGCCCTCCCCCCTC GGGA GAGGGGTGAGGG-TATGAGCCAAAG CCACTCCAGACGGCA  83 294
APY29_RS02235  496432 ..  496451 -  -8.6  -3.38207   GATGGAAGAGATGAA            GCAGTGCGC AGA GCG-ACTGC            GGATGTGATGCGGCA  60 348
APY29_RS02230 NONE
APY29_RS02225 NONE
APY29_RS02220  493048 ..  493075 - -14.8  -2.83522   ATCGTTGGAGCAAAC        GGCCGAGCAGGC TACG GCCTGCCCGTCC         CGCGCATCTACCGCA  77 153
APY29_RS02215 NONE
APY29_RS02200  489154 ..  489182 -  -9.5  -3.90744   GCGGTGCGCAAATAA       GCGCGCAGGAGC GAGAGG GCACC-GCGCGC        TCGATCACGGGCTGA  74 324
APY29_RS02155  482089 ..  482108 -    -2  -3.26874   ACAAACGATGAGGAA            TGGGTGCC TTGC GGCATGCA             CGAACAGTGCCAAGT  45 43
APY29_RS02150  481642 ..  481667 - -14.7  -2.82834   CATTGGATGACGAGA         TGCCTGCCGGT CAGC ACCGGCAGGCT          GGATCAGGCGATGCG  77 61
APY29_RS02145 NONE
APY29_RS02140  480029 ..  480042 -  -4.5   -4.4078   TGGCTTCAAGGAAAA               CGGACG CGT CG-CCG               CCACCCTAGAGGCGG  69 133
APY29_RS02130  478614 ..  478634 -  -8.2  -2.92613   TCCGATTTCAAATCA            TGGCACGC TGTCC GCGTGCCG            ACTTGTAAGCAGTAG  55 376
APY29_RS02125 NONE
APY29_RS02120 NONE
APY29_RS02115  475523 ..  475538 -  -6.8  -3.28712   CGCGCTGCGCTAGAA              TGCGCA CCGG CGCGCA               ACGCGCCTGCCTTCG  55 471
APY29_RS02090 NONE
APY29_RS02085  472219 ..  472255 -    -5  -2.52834   CAGCGCATCAGCAAT   GTCGGGGGGCG-GCCGGC GCA GCCGGCGCGTCAACC-AC   TGGATCAGCGGAACA  43 30
APY29_RS02080  471365 ..  471388 -  -7.4  -2.70932   CTGCTTGGTGAACGA          TCGCACA-GGC GAG GCCATGTGCGT          GATGTCGACCGCGGG  52 133
APY29_RS02040  462986 ..  463002 -  -7.9  -3.40403   CTGCGCGCAGGACAA              GCGCGGC AAC ACCGCAC              TGATGGGCGCCATCT  59 351
APY29_RS02000  455683 ..  455732 - -18.5  -2.52676   CACGCCGTGAACCCA TCCCTGCGCGCCCGATGGCGGCA TCCA TGCCGCCATCCGGCGCGCAATCG GCGAGGGCAACACGC  86 182
APY29_RS01990  451777 ..  451818 - -21.7  -2.56596   CTCGGCAGCAACTGA CAGCGGCTGGGTGCCTGCGC CCT GCA-AGGCATCCAGCCGCTG CGATCAACGAGTCCG 100 113
APY29_RS01980 NONE
APY29_RS01975  449583 ..  449595 -  -6.9  -3.53012   GTTGGTTGCGCGAAA                CACGC TGA GCGCG                AGCGCCTGCGGCCAC  57 65
APY29_RS01960  447364 ..  447413 - -20.7  -4.18018   CCGGCGGATGCAAAA CCACAGGGCGCGATGGAAGGCTG CAAA CAGTCATCCATCGCGCCCTGGTG CATTGATGCAGGTGA 100 53
APY29_RS01940  443889 ..  443911 -  -3.4  -4.10453   GAAAGCTGCGGAAAA           CAGGGAGT GACCACT ACTCCTTG           GTCAGAGATTCCAAC  58 214
APY29_RS01925  440221 ..  440244 -  -9.4  -3.87201   CCAAACAGAAGATAA          GGCCGGCCCC AGGC GGGGCAGGCA           AAGGTCAATGGAACA  74 140
APY29_RS01920  437005 ..  437015 -  -8.2  -2.66787   GGAATAGGCACAGCA                 CGCG GGG CGCG                 TGGCCCATGCTTCAA  53 188
APY29_RS01915 NONE
APY29_RS01910 NONE
APY29_RS01905  433638 ..  433648 -  -8.2  -2.52464   TGTTCCCGCAATGGA                 CGGC AAT GCCG                 CAATCTAGCATTGCT  53 83
APY29_RS01900  432495 ..  432526 - -20.3  -3.31792   GCACCATCGCCACAA      CGCAAAAGCCCGC ATCGCG GCGGGCTTTTGCG       TTTCCATGTCATCGA  95 52
APY29_RS01870  425640 ..  425654 -  -7.8  -4.58283   GAAGGGCTGGAAAAA               GCCCTG GCG CAGGAC               GTGGACTGCACCGCG  81 321
APY29_RS01860  424413 ..  424434 -  -7.9  -4.30014   GCGATCAACTGAAAA           TCGCCCGCC AACC AGCGCGCGA            TGGCACTGCGCTGCC  76 47
APY29_RS01840  419122 ..  419160 -  -6.5  -3.04322   CCGAAGGTCTGAAGA   GCCGCACAGGCGTCATC ATGCG GGCGGCGTCTGTGCGCC   GCCGCCGGGCTATGG  51 63
APY29_RS01830 NONE
APY29_RS01825  416390 ..  416406 -  -6.5  -3.05596   CACGTGCGTAGTCAA              CGGCCAT CCC ATGGTCG              CCACTCTCATCGACA  51 69
APY29_RS01820 NONE
APY29_RS01815  414773 ..  414800 -  -4.8  -2.70143   ATGGGAAGCAGAGCA        TCGTG-TGCACCG CGT CGTTGCAGCGCGA        AGGCTGCGCCAACCC  44 257
APY29_RS01810  413796 ..  413814 -  -7.3  -3.35679   GGCGTGGATGGACAA             GGCCGCG TTTCT CGCCGCC             TCGCGCTATGCGCGC  56 436
APY29_RS01775  410763 ..  410776 -  -2.3  -4.73613   CTACTACGAAGAAAA               GAAGG ACTT CCGTC                GCCCGGTTGCCGCGC  74 301
APY29_RS01765 NONE
APY29_RS01760  407484 ..  407496 -  -4.8  -2.79831   GCAAGCGTCACCACA                TCGG GCCGA CCGA                GATCTGATCTTGCGC  44 69
APY29_RS01735 NONE
APY29_RS01730  398341 ..  398360 -  -9.2  -3.13522   AGTCGGCCAGCAAGA            CCGTGGCG CGCA CGCCACGC             CGCTGACCGAGGCGA  61 358
APY29_RS01700 NONE
APY29_RS01695 NONE
APY29_RS01690 NONE
APY29_RS01685  385857 ..  385869 -  -4.8   -4.0098   TGGCAACGGAAACAA                TGCG ACGGG CGCA                GCGCGGCAACAACGT  63 266
APY29_RS01680  385546 ..  385572 -    -3  -3.29324   TCGATTGAAACGTAA        TCGCGCTGGTC TGTGAT GACTAGCG-GA         TCGTCCCGCTTACTG  46 122
APY29_RS01670  382506 ..  382519 -  -3.7  -3.53012   TTGCTGGGCCGCAAA               TCCGG CAAG CCGGT                ACGCCCGGGCATGCT  51 230
APY29_RS01615  373959 ..  373978 -  -4.8  -3.09492   CGCCGAAGCCGAACA            CGGCCAGC ACCT GCGGGTCG             GTCAGCAGCACGGCA  47 117
APY29_RS01610  372861 ..  372871 -  -3.2  -3.36289   TACGATCGCAAGCAA                 CAAC ATG GTCG                 GCCTCTGCGCGCAAT  46 220
APY29_RS01605  372427 ..  372441 -  -5.6  -3.90112   TGCCGCGCAACGAAA               CCGGCA AGC TGCCGC               GCGATGTGGTGCTGG  63 106
APY29_RS01595 NONE
APY29_RS01590  368112 ..  368135 - -10.2  -3.01712   CGTCTGCGTGCAACA          CGCGCAACGC CCGA GCCCTGCGCG           TGTCGTCCGCTTCCA  62 73
APY29_RS01585 NONE
APY29_RS01580  366388 ..  366398 -  -3.2  -3.01791   ACCTGGGCTTGAAGA                 TCGC CGG GCAA                 CCGCACACGCAAGCT  42 134
APY29_RS01570  364917 ..  364948 - -13.6  -3.08738   AAGAATGCTATTCAA      TTGGCCGCGCGCGA TTGG CCGCGCGCGGCGAT       GTAGAGGTCATGCTG  75 401
APY29_RS01555  361228 ..  361253 - -10.3  -4.94262   GAGATCAAAAACAAA         GCCACGGAACG TCTC CGACCCGCGGC          CCCTGCTTTACGAAT 100 54
APY29_RS01465 NONE
APY29_RS01460  327591 ..  327626 - -10.5   -3.7948   CGAACAGGCATGAAA   GTGCGCCGCCGCGGCGT GCCG AC-CCACGGCAG-GCAC    ATGCCGAGCAATGCG  74 110
APY29_RS01450  324297 ..  324355 -  -7.4  -3.95378   GGAGAGGCGAAACAA TCGGCGCAGCGC-GGTGGCGGCCGT-GCG CGCG CGCGACGACCGCCAGCTGCGC-ATGCAAA CCCGCTCAGAAGCGC  68 31
APY29_RS01445 NONE
APY29_RS01440  321559 ..  321579 - -16.1  -4.96848   TGCCGCACACAAAAA            GCGGCGCCG AAC CGACGCCGC            TCCGTTGCAATGGAT 100 54
APY29_RS01435  320791 ..  320802 -  -5.8  -3.61894   AACCGTCCGCAAGAA                TGCC TGGC GGCA                 CTGGATCAGACCATG  54 422
APY29_RS01420  317110 ..  317123 -  -2.3  -3.51708   TATTGCGCAAATGAA               TGTCG CGAA CGTCA                AGCGGATGGCCGACA  47 120
APY29_RS01415  316444 ..  316454 -  -2.6  -3.62096   TTCGACCACTCCAAA                 TTTT CGA AAAA                 TGAATAAATTTTCCA  49 83
APY29_RS01410  314384 ..  314419 -    -9  -3.17075   GGCGTTGGAAGGTAA    TCCCCCCACTTCTAGC GGTC GCCAGAAGTGGAGCTA     AGCGGCCATCGCCAA  61 23
APY29_RS01365  303056 ..  303070 -  -9.2  -3.03124   GGCCAGCCCGGAATA               CCGCGC CGA GCGCGA               AGCGACCGCTGAAAA  57 369
APY29_RS01350  301018 ..  301041 -  -8.1  -3.55563   ATGGCATCGTGGAAA          CGGCACCGA TCAAGC TCGGCGCCA           ACGTCGAACACCCCA  60 344
        ligK NONE
APY29_RS01315 NONE
APY29_RS01310 NONE
APY29_RS01305  291161 ..  291185 - -15.7  -3.86194   AAGGTGCGTGACAAA          GCCCCTCTCCC CTC GGGAGAGGGGT          TGGGGTGAGGGTACG  91 133
APY29_RS01285  286655 ..  286688 - -15.6  -3.86822   CAAGTCCGGCAGAAA     TTTTTGTAAGGGAC GTCCCT GTCCCTTACAAAAA      CCTCGCGCATCCATG  91 17
APY29_RS01255  278263 ..  278284 -  -4.3  -2.71011   AGTGCGCCGCAATCA           GGGATGCCG CGCG CCGCATCTC            GGGGGCAGTGCGTCC  42 58
APY29_RS01250  276355 ..  276368 -  -6.7  -3.33696   TGGTGCGCCAAGGAA               GCCTT GCTC AAGGC                CCATGGGCATGGCCT  54 230
APY29_RS01240  275524 ..  275549 - -20.5  -2.64107   CAAAGGCTGAGACGA         CAACGCCCGGG CAGG CCCGGGCGTTG          CGTGATGCGACAGCT  91 54
APY29_RS01225  272737 ..  272766 -  -8.5  -3.61398   TCTTCGCCGCAAGAA       CGCTAGCCGCGCCT GCC ATGCGTGGC-AGCG       CCTCGCTCAGCCGAA  65 32
         acs  263480 ..  263505 - -13.4  -2.53715   TCCACTATCAGCAAC         CAGGGAATCG CTCTAC CGATTCCCTG          CTCCCGATTTCCCAT  71 51
APY29_RS01185  262101 ..  262119 -    -3  -4.60487   CACGACCGGCAAAAA             CTGGAACG GCC CGATCAAG             GACTTCCAGCTGACC  71 488
APY29_RS01170 NONE
APY29_RS01165  259908 ..  259933 - -14.7  -3.64822   AGCGCTGCAGTCAAA         CGGCGAGGCCC GGGG AGACCTCGCCG          TCAGGCGTAACAGCG  85 173
APY29_RS01155 NONE
APY29_RS01150 NONE
APY29_RS01145 NONE
APY29_RS01140  255273 ..  255285 -  -3.3  -2.90763   GGCACATGCGACAGA                TCGCA GCA TGCGT                CGTTGCCGCACTCAG  42 37
APY29_RS01135  254140 ..  254158 - -13.8  -2.52464   GGGCGCTTCAAGGCA             CGCGCGCC AAT GGCGCGCA             AGCTGTGCCTTGGCG  68 175
APY29_RS01125  252298 ..  252339 -  -9.3  -3.14132   GCCGTCCCGGACGAA CCACGACTTCCTTCTCCCG CGCG CGGGAGAAGGTGCCCGCAG  GGCGGATGAGCGGCC  61 47
APY29_RS01110 NONE
APY29_RS01105  249102 ..  249142 - -13.9  -3.31144   TGGGCACGGTCACAA  CGGCATGCGCCCGCGCCAA CCG TCGTCGTGCACGCATGCCG  CTGGTCTCGCCAAAC  77 114
APY29_RS01100  248253 ..  248267 -  -8.5  -3.14132   TCGGTTGCTGACCAA               GCCGG TGAAG CCGGC               CTCGTTACGCGCGTT  56 246
APY29_RS01090 NONE
APY29_RS01085  241460 ..  241488 -    -8  -2.70932   TGGGTGGCTGAAGCA        GCGGGAGCGCGC TCGCG ACGCCCTCCTGC        TGGCGTGCGTCAGCG  52 35
APY29_RS01070  236830 ..  236840 -  -2.4  -3.45321   ACGCACAACGCACAA                 CGGC CTA GGCG                 GCACTCACCGTAGGC  47 65
APY29_RS01065  236089 ..  236107 -   -11  -2.65264   GGACGATTGACATGA             CCGCGCAA CAC TTGCGCAG             CGCTGCATTCAGACA  62 102
APY29_RS01060  234213 ..  234240 - -21.4  -3.72241   CACCAATCACTGAAA        GACACTGCCGCC CGAA GGCGGCAGTGTC         GTGTGCAGACAGGAC 100 68
APY29_RS01040  232129 ..  232142 -  -4.5  -2.78463   ATTTCTTTGATGACA               GCGAG TTAG CTCAC                TTTTGGCTGTGTTTT  43 62
APY29_RS01030  228577 ..  228607 -  -2.6   -3.1319   CCAAAAGTGAGCTAA       CTTGCTGTAAGTAA AGG TTTCTTACACCAAT       CCCTGCCGACCCTCA  43 61
APY29_RS01025 NONE
APY29_RS01020 NONE
APY29_RS01015  226286 ..  226297 -  -5.8  -3.85256   GATACCCAAACAGAA                CCAG CATC CTGG                 CAGGGCAGAATGATC  62 179
APY29_RS01010  225703 ..  225742 -  -6.2  -3.33261   GGCCAAGTCCGAGAA  GTGAGTGCTGGCGGCGCT GTCC AGCGCTTCTGGCACTCGC   ATCCAGTTCATTTGG  52 93
APY29_RS01005  223765 ..  223816 -   -10  -3.51232   CCGCCGCCAAATGAA CTGGATGCGAGTGCCAGAAGCGCT GGAC AGCGCCGCCAGCACTCACTTCTCG GACTTGGCCGCTTTT  68 476
APY29_RS01000  223032 ..  223054 -  -4.8  -3.71527   TTTCAAGCACCGAAA           TTGTAGTCAC AAT GCGACCACGA           TGCAAGGCTGCATCG  58 78
APY29_RS00995 NONE
APY29_RS00990  222187 ..  222211 -   -10  -3.08015   GGAATCAGCTCAACA         GCGGCG-CG-GC GCA GCTCGTCGCCGC         GCATGCGGCCCTTGA  62 275
APY29_RS00970 NONE
APY29_RS00965  218252 ..  218266 -  -3.4  -2.55351   CGGCGTCACATTAAG               CATGGC CCG GCCTCG               GTCACTTGATGTCGA  39 27
APY29_RS00960  214813 ..  214840 -  -6.2  -3.28712   CGTCTTGCTGCACAA        GCGGACATGGCGG ACA CCGACATG-CAGC        GCTTCATGGATGAGG  53 464
APY29_RS00865  201690 ..  201709 -  -6.3   -4.7497   CCCAGTGATGAAAAA            GCCGCCC TTGCCG GGGCGGT             TTTTTCGTTTTCGGC  82 369
APY29_RS00855  200973 ..  200986 -  -4.5  -2.78463   ATTTCTTTGATGACA               GCGAG TTAG CTCAC                TTTTGGCTGTGTTTT  43 68
APY29_RS00845  197006 ..  197023 -  -6.3  -3.30159   TGAACGCTTCGACAA             GCG-CGAT GCA ATCGACGC             GCTTGCCAGGACAAC  53 285
APY29_RS00830  193162 ..  193177 -  -3.2  -3.44206   CAATATCGATGACAA              GCCC TGGGCGGC GGGC               CTACCGCAGACGCTG  48 307
APY29_RS00805 NONE
APY29_RS00800  181824 ..  181836 -  -4.8  -3.61398   TGCCGGCGGTAAGAA                CAGG GTTGG CCTG                CTACGTAGTCAGCTC  55 60
APY29_RS00785  178453 ..  178468 -  -4.6  -4.41548   CGACAGCGCAGAAAA              TAGCCG AGCG CGGCGA               CAAAATCCATGTGGC  71 97
APY29_RS00780  174373 ..  174401 -    -3  -2.58812   CGGAAATGGAAGGCA       TGCCGCAGCCGGT CCGC ACCCGC-GCGACG        GCGAGCGCAGGTGTT  39 164
APY29_RS00775 NONE
APY29_RS00770 NONE
APY29_RS00765  173320 ..  173346 -  -8.6  -4.91084   CAGCGAATAAGAAAA         CTGCTGCGCCTG CGT CAGGCCCAACTG         TCGTGAGCCATTCTC  90 86
APY29_RS00755  171354 ..  171390 -   -13  -3.01712   CCGGTTGCTGCAACA    GCACGATATGCGCCTG TGGCG CGGACGCATGTCGTGC    GGAAAAGCTGACAAC  71 41
APY29_RS00745  169496 ..  169506 -  -2.4  -3.14132   TGTCGCGCGCAGGAA                 TCGC TCG GCGG                 CAACCGTTCGGTGGA  43 152
APY29_RS00740  168575 ..  168599 -  -2.8    -3.794   CTTGAACGTATGAAA          GGCAGCGT TGCAGATTG ACGTTGCC          AAGGGCGCAATAGCC  54 231
APY29_RS00675 NONE
APY29_RS00670  148786 ..  148805 -   -10  -3.14564   TCACCGCTGCATCAA            CGCGG-TGC ATT GCAGCCGCG            CGCGGCGAACAGCGC  64 66
APY29_RS00665  148297 ..  148312 -  -6.8  -3.33696   GGGCTCCGCAACCAA              GCG-CCG GAT CGGCCGC              CATGCACCAGCACGC  55 53
APY29_RS00660  146990 ..  147002 -  -3.3  -3.24745   TAAAAGAACAAATTA                GCCTC TGT GAGTC                ATGATCGAGGCGGGG  44 80
APY29_RS00630  143335 ..  143348 -  -5.9  -3.16564   CCGTTACGCGACCAA               CCCAG CCAG CCGGG                CGAACAGCATGGCAA  51 291
APY29_RS00620 NONE
APY29_RS00615  141724 ..  141749 -  -6.7  -3.65902   GGCAGCGGACCGAAA         GTGCATCACCG GTCG CGGCGAAGCGC          GCGCCGATAGGCGGG  59 75
APY29_RS00600 NONE
APY29_RS00595 NONE
APY29_RS00590  136655 ..  136669 -  -3.5   -3.5764   AAGTGCAGGCCTAAA               CGAGC TCGGC ACTCG               GGCCAGCGTGTGGGG  51 451
APY29_RS00585  136081 ..  136094 -  -5.9  -3.06796   GCGCATCCCAGGCAA               CCACG CGGG CGCGG                CTATATGTCGGCCGA  49 26
APY29_RS00580  134998 ..  135012 -  -4.2  -4.20918   GTCAATGCCAATAAA               GATCGG ACA CTGATC               TTTTTCAGCGTAGTG  65 386
APY29_RS00565  129778 ..  129802 - -15.1   -3.1739   ACAGCAGCTCAGCAA          GACAACCGGCA ACG TACCGGTTGTC          CTTATCGCGAAGTCT  83 112
APY29_RS00560  129000 ..  129052 -  -6.9  -2.82635   ACGTGGACCACCACA GCCTGGGCGCGATGCTGGTGCCGCGC GATG GCGCGGTGGC-GCGT-GCGCCCAG-C GAGGAACTCACCCCC  50 411
APY29_RS00550 NONE
APY29_RS00545  124839 ..  124865 - -17.3  -3.23975   ACTCCTCAAAAAGCA         TCGCCGCACGG GGTCA CCGCGCGGCGA         ATATTCGAAACTGCA  89 112
APY29_RS00540  120702 ..  120719 -  -5.5  -2.60763   CGTACACCTGAGAAT             GCGGTAA ACAA TTCCCGC              GCGACCACAGTCAGT  46 257
APY29_RS00535  117834 ..  117855 -  -6.5  -3.57561   GGCGAATTTGCCAAA           CAGGCCGGCG TGG CGC-AGCCCG           TGGGGTAGTCGCGCT  59 499
APY29_RS00520  116054 ..  116088 - -11.3  -3.57144   TCCTCGAGGGGGAAA    CCAGCAGCGTGCGCAC TGCC GCGCGC-CGCAGCGGG     TCAGACCATGCCGCC  73 26
APY29_RS00515  114967 ..  114983 -  -5.7  -4.63932   GAGCGGCCAACAAAA              CCGCGGC ACA GCCGCCA              GGCAGGCGCGGCCGG  76 173
APY29_RS00490 NONE
APY29_RS00485  109111 ..  109134 -   -11  -3.05384   TTGGGCGGCATGCAA          GC-GCCCAAGC CAC GCTCGGGCAGC          GTCAGGGATTGCGAG  66 436
APY29_RS00465 NONE
APY29_RS00460  101912 ..  101930 -  -2.2   -3.5627   ACACCAGGCGGGAAA             CCAAGCTC GCT GTGCGCGG             CGGGGAGTTCCGAAA  49 86
APY29_RS00445   99458 ..   99475 -  -6.2  -2.74523   GCACTTGCAACACCA             CGGGCC CGCCAC AGCCCG              GCACTCCTGCGTCAC  46 122
APY29_RS00440   98938 ..   98958 -  -8.2  -3.77464   ACACCATTGACGAAA            CGCCTGCC CTCAC GTCAGGCG            GGCGTGGTGGTACGA  69 308
APY29_RS00420 NONE
APY29_RS00415 NONE
APY29_RS00410   93060 ..   93070 -  -2.4  -2.81133   CAGGGACGCAGGACA                 GGCG AAG CGCA                 GCAGTATCACGGCCT  39 32
APY29_RS00405   92552 ..   92576 -  -5.6  -3.49653   AGCACGTGCACACAA          CTCAGCGTGC GTGGG ACACGCCGTG          CGACCACGCCATCTT  55 2
APY29_RS00380   87206 ..   87232 -  -4.9   -4.1822   CGCTAGCCTAACAAA         CGCCAGCGCGG GCAAG CCGGGCGTGCG         GGTGTGGCTTCGATC  66 94
APY29_RS00375   86934 ..   86985 -  -5.1  -2.71364   CGACGGCCGCAAGCA TGCGG-CAGCCGCGCA-CGAGCAGGC GGG GCATGCTCACTGC-CAGCGGTCCGCG CGCGCTGCGGACCGC  45 7
APY29_RS00370 NONE
APY29_RS00365 NONE
APY29_RS00360 NONE
APY29_RS23775 NONE
APY29_RS23770 NONE
APY29_RS00355 NONE
APY29_RS00350 NONE
APY29_RS23760 NONE
APY29_RS23755 NONE
APY29_RS00345 NONE
APY29_RS23750 NONE
APY29_RS00340 NONE
APY29_RS23745 NONE
APY29_RS23740 NONE
        asnB NONE
APY29_RS00330 NONE
APY29_RS00325 NONE
APY29_RS00320 NONE
APY29_RS00315   72131 ..   72150 -    -2  -3.68988   GCGCACGCAAGAGAA            TCTGCTCC GGGG GGAGGAGG             TCCAACGGACATCCG  52 69
APY29_RS00310 NONE
APY29_RS00305 NONE
APY29_RS23710   69845 ..   69876 -  -7.8  -3.14132   GGTGCTGCGTACCAA      CACCGAGCGGCCGG AGAC CCTGCAGATCGGCG       GGGCGGAACTCCCCC  56 128
APY29_RS23705   65777 ..   65790 -  -5.3   -3.1364   CATCGAACCACGGAA               GAACA TCGA TGTTC                TGTTGACGGCGTATG  49 461
APY29_RS00280 NONE
APY29_RS23690 NONE
APY29_RS23685 NONE
APY29_RS00270   62242 ..   62257 -  -3.2   -3.7732   CTTGCATACCAACAA              GATCGC GCAT GCGATG               AGCGCGGTGGCCGGT  56 416
APY29_RS00260 NONE
APY29_RS23665 NONE
APY29_RS23660 NONE
APY29_RS23655   59307 ..   59325 -  -2.3  -4.11884   AAGCATAAGCACAAA             GTCACGC GACGG GCATGGC             TTGCGCACACGGCGT  59 231
APY29_RS00250   58846 ..   58880 - -16.5  -3.28712   TCCCTTGTGCCAGAA    GGC-TTGGCGCCGGTC TTGC GACAGGCGCCAACGCC     GTCTCAGCCGCAGCG  88 29
APY29_RS23635 NONE
APY29_RS23630 NONE
APY29_RS23625 NONE
APY29_RS00245 NONE
APY29_RS00240 NONE
APY29_RS23610   50373 ..   50388 -  -8.2  -3.27476   ATTTCCAAGGACGAA              GCGCAG ATGG CCGCGC               AGTACAACACCCTGG  60 510
APY29_RS23605   49835 ..   49862 -  -4.8  -3.07443   GCATACCGCACGCAA        CGAATGGCACAA CACG CTGTACCCCTCG         GTGCCCGGCCACGAG  47 26
APY29_RS00230 NONE
APY29_RS23600 NONE
APY29_RS00225 NONE
APY29_RS23595   48261 ..   48286 - -15.5  -5.37345   GGCAATGACAAAAAA         GTGGCCGCAAC ACTG GTTGCGACCAC          CTCTGGCTGCGCCGC 100 16
APY29_RS23590 NONE
APY29_RS00220   47647 ..   47658 -  -7.2  -2.67515   TCCATCACCAGACTA                GGCG TATA CGCC                 CGCACAAACCACGGT  51 37
APY29_RS00215 NONE
APY29_RS23580   46037 ..   46072 -  -4.6  -4.38154   ATAGGCCGCACAAAA    GCGCGCGATATCGCGAA GTG TTCGCGCAACTGCG-GC    GTGCGTGTGTCCGCG  68 318
APY29_RS23575 NONE
APY29_RS00205 NONE
APY29_RS00200 NONE
APY29_RS23570   43758 ..   43775 - -12.7  -4.18018   TTCTGTTACGCAAAA             GGCCTCC CATC GGAGGCC              TTTTGCGTTGCTGTG  89 2
APY29_RS00185 NONE
APY29_RS23560 NONE
APY29_RS00180   37827 ..   37852 -  -7.5  -3.61517   AGGTGTTGGCAACAA         CGCAGCGGG TGTGATTC CCCGCTGGG          TCAGCGCGGTCTTGA  62 179
APY29_RS00160   34487 ..   34515 -    -2  -4.56702   TTCCAATCAAACAAA       GTCA--GATTTTTA TGT TAAAAATCAATGAC       TTGTAAGTGACTGGC  68 48
APY29_RS00155   32982 ..   32993 -    -3  -4.19238   TCGCCAACCTCAAAA                GTAA ATAA TTAC                 TCGAAGTCCTGGGGA  63 8
APY29_RS23525   32043 ..   32054 -    -3  -4.44797   CTACGAAGACGAAAA                TCTT CTCA AAGA                 CGATACTGATAGCAC  69 358
APY29_RS00135 NONE
APY29_RS23510   29218 ..   29231 -  -5.2  -4.89852   GGACACTTACAAAAA               GGCC GATCAA GGCC                ATGAGGAGTGTTCAT  80 172
APY29_RS00125 NONE
APY29_RS00120   27704 ..   27757 -  -3.5  -3.60098   ACCCCGGACTCTAAA CGCGGCCGCTACTCAGGGCGGGGGG ACGT CGCATGGGCCTGAGTATCGGCAGTG CGGTCTCACCGCTTG  51 166
APY29_RS00110   26182 ..   26204 -  -7.1  -2.56914   GATGTCAGCAAGCGA          TGACTGGGCT GTGC AGCC-AGTCA           TGAGCTACTGCGGAC  48 127
APY29_RS23485 NONE
APY29_RS00105   25245 ..   25261 -  -4.3  -3.16055   CAAAGGCGTCACTAA              GGGCGTC GGC GATACCC              TCTTCGCTCTCGCAC  47 187
APY29_RS00100 NONE
APY29_RS00095 NONE
APY29_RS23455 NONE
APY29_RS00090   19378 ..   19393 -  -7.6   -3.2827   GCAGCGAACGACGAA              GATTCG AGTG CGAATC               CGGTCTTCTCGCTTA  58 452
APY29_RS00085 NONE
APY29_RS00080 NONE
APY29_RS23445   17492 ..   17514 -   -12  -2.84919   ATGGACGTACAACCA           CGAGCGCC CGAATAT GGCGCTCG           GCGGCATCACGCCTG  67 70
APY29_RS23440 NONE
         cls   14769 ..   14782 -  -3.7  -2.62184   CCGTTGGTCAGAGCA               GCGGC GACA GCAGC                CGGGCAAACGCTTCG  41 4
APY29_RS00065 NONE
APY29_RS00060   13606 ..   13624 - -13.2  -2.52464   GTTGTCGCCAACCCA             GGCATCGA TCA TCGATGCC             GACGTTACCGCATGA  67 43
APY29_RS23425   12018 ..   12041 -  -9.6  -3.05463   ATCCGCGCCATGGAA          GAACAGC-CGG CTT CCGAGCCGTTC          TCCAAGATCGCATTG  57 163
APY29_RS23410 NONE
APY29_RS23405 NONE
APY29_RS23400    7020 ..    7032 -  -2.6  -3.35679   CCCGGGCAGCGACAA                CGCG CCTGC CACG                TTGGTGGCCATCCGC  46 41
APY29_RS23395 NONE
APY29_RS23390    5308 ..    5349 -  -3.6  -3.86312   ATCCACAAGGAAGAA GGCGTGTCG-GCGGCCGAGG TGAT CCTC-ACCGTGCTCCACGCC GGCGGCAAGTTCGAC  57 242
APY29_RS23385    3654 ..    3669 -  -6.8  -3.80625   TGTGGATAAGCGAAA              GCACCT CCAC AGGCGC               TGTTTTTATCCACAT  62 416
APY29_RS23375    1846 ..    1897 -  -4.2  -3.58343   CGCAGGACGGCGAAA CCA-CGATTCCGGCGCGCAAGCTGT TCG ACATCCTGCGCGCCCTGCCCGACGG CAGCCGCGTCACCAT  53 89
APY29_RS23370     760 ..     802 -  -6.9  -2.66316   GCCGCCAGCAGATCA TCCTGACCTGCGACCGCTAC CCGC GC-GAGGTCGAAGGCCTGGA GCCGCGGCTGAAGTC   0 20
