APY29_RS17980 d55af1e2b15abaa95797562aa0abded2 175 Pfam PF00347 Ribosomal protein L6 12 80 5.1E-15 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS17980 d55af1e2b15abaa95797562aa0abded2 175 Pfam PF00347 Ribosomal protein L6 88 162 1.3E-19 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS17980 d55af1e2b15abaa95797562aa0abded2 175 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 174 1.5E-68 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APY29_RS17980 d55af1e2b15abaa95797562aa0abded2 175 PIRSF PIRSF002162 1 175 9.1E-41 T 28-03-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS17980 d55af1e2b15abaa95797562aa0abded2 175 SUPERFAMILY SSF56053 2 80 5.9E-19 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS17980 d55af1e2b15abaa95797562aa0abded2 175 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 152 160 - T 28-03-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS17980 d55af1e2b15abaa95797562aa0abded2 175 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 174 36.383 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APY29_RS17980 d55af1e2b15abaa95797562aa0abded2 175 Gene3D G3DSA:3.90.930.12 5 83 1.7E-21 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS17980 d55af1e2b15abaa95797562aa0abded2 175 PRINTS PR00059 Ribosomal protein L6 signature 139 160 3.5E-33 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APY29_RS17980 d55af1e2b15abaa95797562aa0abded2 175 PRINTS PR00059 Ribosomal protein L6 signature 69 94 3.5E-33 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APY29_RS17980 d55af1e2b15abaa95797562aa0abded2 175 PRINTS PR00059 Ribosomal protein L6 signature 97 113 3.5E-33 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APY29_RS17980 d55af1e2b15abaa95797562aa0abded2 175 Gene3D G3DSA:3.90.930.12 84 175 1.4E-38 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS17980 d55af1e2b15abaa95797562aa0abded2 175 SUPERFAMILY SSF56053 81 174 4.03E-35 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS01745 da2cd2fc04646711e8a159453027af03 455 Gene3D G3DSA:3.10.580.10 115 252 1.3E-18 T 28-03-2018 APY29_RS01745 da2cd2fc04646711e8a159453027af03 455 SUPERFAMILY SSF54631 124 266 7.6E-27 T 28-03-2018 APY29_RS01745 da2cd2fc04646711e8a159453027af03 455 SUPERFAMILY SSF161093 273 450 6.15E-48 T 28-03-2018 APY29_RS01745 da2cd2fc04646711e8a159453027af03 455 SUPERFAMILY SSF158791 12 122 3.4E-17 T 28-03-2018 APY29_RS01745 da2cd2fc04646711e8a159453027af03 455 SMART SM00924 22 125 1.7E-22 T 28-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain APY29_RS01745 da2cd2fc04646711e8a159453027af03 455 SMART SM00116 198 246 9.1E-11 T 28-03-2018 IPR000644 CBS domain APY29_RS01745 da2cd2fc04646711e8a159453027af03 455 TIGRFAM TIGR00400 mgtE: magnesium transporter 13 450 1.3E-101 T 28-03-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 APY29_RS01745 da2cd2fc04646711e8a159453027af03 455 Gene3D G3DSA:1.10.357.20 269 453 2.2E-42 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 APY29_RS01745 da2cd2fc04646711e8a159453027af03 455 Pfam PF03448 MgtE intracellular N domain 23 123 3.9E-19 T 28-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain APY29_RS01745 da2cd2fc04646711e8a159453027af03 455 Pfam PF01769 Divalent cation transporter 313 443 4.1E-30 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 APY29_RS01745 da2cd2fc04646711e8a159453027af03 455 Pfam PF00571 CBS domain 195 245 1.7E-9 T 28-03-2018 IPR000644 CBS domain APY29_RS01745 da2cd2fc04646711e8a159453027af03 455 Gene3D G3DSA:1.25.60.10 4 114 9.9E-14 T 28-03-2018 APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 SMART SM01231 287 347 1.3E-13 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 451 2.4E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 487 2.4E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 511 2.4E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 530 2.4E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 SUPERFAMILY SSF47226 2 126 5.89E-29 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 SMART SM00260 525 657 2.3E-24 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 Gene3D G3DSA:2.40.50.180 546 602 5.0E-10 T 28-03-2018 APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 SMART SM00073 3 100 9.0E-25 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 Pfam PF01627 Hpt domain 5 98 1.1E-16 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 SUPERFAMILY SSF47384 288 348 1.65E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 288 343 1.1E-8 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 SUPERFAMILY SSF50341 532 657 4.58E-28 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 532 1.1E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 SUPERFAMILY SSF55874 349 531 8.77E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 Gene3D G3DSA:1.10.287.560 287 346 7.7E-12 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 SMART SM00387 392 533 3.5E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 Gene3D G3DSA:1.20.120.160 1 150 7.4E-30 T 28-03-2018 APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 Pfam PF01584 CheW-like domain 539 659 4.1E-22 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 Gene3D G3DSA:3.30.70.1110 168 236 0.0018 T 28-03-2018 IPR010808 Signal transduction histidine kinase, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 Gene3D G3DSA:3.30.565.10 347 534 3.2E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS07800 7e8da8d6235b06e9a35fba50981329e3 669 Gene3D G3DSA:2.30.30.40 603 657 3.0E-19 T 28-03-2018 APY29_RS21090 39a17a68d5f3e6c6433e467bf3d6524e 357 SUPERFAMILY SSF160544 239 344 1.7E-31 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal APY29_RS21090 39a17a68d5f3e6c6433e467bf3d6524e 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 203 221 2.4E-38 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APY29_RS21090 39a17a68d5f3e6c6433e467bf3d6524e 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 297 318 2.4E-38 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APY29_RS21090 39a17a68d5f3e6c6433e467bf3d6524e 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 223 240 2.4E-38 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APY29_RS21090 39a17a68d5f3e6c6433e467bf3d6524e 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 267 282 2.4E-38 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APY29_RS21090 39a17a68d5f3e6c6433e467bf3d6524e 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 2.4E-38 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APY29_RS21090 39a17a68d5f3e6c6433e467bf3d6524e 357 Gene3D G3DSA:3.40.1690.10 213 347 5.9E-47 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal APY29_RS21090 39a17a68d5f3e6c6433e467bf3d6524e 357 Pfam PF01312 FlhB HrpN YscU SpaS Family 3 341 4.8E-105 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APY29_RS21090 39a17a68d5f3e6c6433e467bf3d6524e 357 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 3 343 1.4E-99 T 28-03-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 APY29_RS18405 3ca99c4b7e882e79a1df1c7b3cac5982 216 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 45 207 35.922 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 APY29_RS18405 3ca99c4b7e882e79a1df1c7b3cac5982 216 Gene3D G3DSA:3.30.1060.10 38 216 3.7E-74 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 APY29_RS18405 3ca99c4b7e882e79a1df1c7b3cac5982 216 SUPERFAMILY SSF55068 10 211 5.76E-75 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 APY29_RS18405 3ca99c4b7e882e79a1df1c7b3cac5982 216 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 47 201 3.8E-60 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 APY29_RS18405 3ca99c4b7e882e79a1df1c7b3cac5982 216 Pfam PF01625 Peptide methionine sulfoxide reductase 48 201 4.7E-62 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 APY29_RS10245 689a7795241a94fb805941045626ae16 199 SUPERFAMILY SSF46689 1 73 4.12E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS10245 689a7795241a94fb805941045626ae16 199 Gene3D G3DSA:1.10.10.60 2 33 8.2E-7 T 28-03-2018 APY29_RS10245 689a7795241a94fb805941045626ae16 199 Pfam PF01527 Transposase 2 71 3.8E-19 T 28-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APY29_RS10245 689a7795241a94fb805941045626ae16 199 Gene3D G3DSA:1.10.357.10 34 171 3.2E-4 T 28-03-2018 APY29_RS13540 071762c944b34d1eccd43c05e4d4f49d 322 Gene3D G3DSA:3.30.230.10 18 183 3.0E-23 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APY29_RS13540 071762c944b34d1eccd43c05e4d4f49d 322 SUPERFAMILY SSF55060 186 293 1.58E-23 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain APY29_RS13540 071762c944b34d1eccd43c05e4d4f49d 322 SUPERFAMILY SSF54211 21 177 9.87E-27 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS13540 071762c944b34d1eccd43c05e4d4f49d 322 PRINTS PR00958 Homoserine kinase signature 27 42 1.9E-22 T 28-03-2018 APY29_RS13540 071762c944b34d1eccd43c05e4d4f49d 322 PRINTS PR00958 Homoserine kinase signature 112 127 1.9E-22 T 28-03-2018 APY29_RS13540 071762c944b34d1eccd43c05e4d4f49d 322 PRINTS PR00958 Homoserine kinase signature 152 165 1.9E-22 T 28-03-2018 APY29_RS13540 071762c944b34d1eccd43c05e4d4f49d 322 PRINTS PR00958 Homoserine kinase signature 187 204 1.9E-22 T 28-03-2018 APY29_RS13540 071762c944b34d1eccd43c05e4d4f49d 322 PRINTS PR00958 Homoserine kinase signature 266 281 1.9E-22 T 28-03-2018 APY29_RS13540 071762c944b34d1eccd43c05e4d4f49d 322 Pfam PF00288 GHMP kinases N terminal domain 99 164 2.4E-9 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 APY29_RS13540 071762c944b34d1eccd43c05e4d4f49d 322 Gene3D G3DSA:3.30.70.890 184 313 1.5E-23 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain APY29_RS13540 071762c944b34d1eccd43c05e4d4f49d 322 Pfam PF08544 GHMP kinases C terminal 229 299 1.2E-10 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain APY29_RS13540 071762c944b34d1eccd43c05e4d4f49d 322 PIRSF PIRSF000676 17 321 5.8E-77 T 28-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 APY29_RS13540 071762c944b34d1eccd43c05e4d4f49d 322 Hamap MF_00384 Homoserine kinase [thrB]. 20 320 28.275 T 28-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 APY29_RS18640 46459fe8f1e32668d9d173c36e3972c0 325 Gene3D G3DSA:1.10.3720.10 12 310 4.8E-27 T 28-03-2018 APY29_RS18640 46459fe8f1e32668d9d173c36e3972c0 325 SUPERFAMILY SSF161098 112 304 5.23E-11 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS18640 46459fe8f1e32668d9d173c36e3972c0 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 126 321 1.2E-30 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS18275 2eb2dc5a5323e456296334235746f45c 361 PIRSF PIRSF006468 4 361 1.8E-134 T 28-03-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 APY29_RS18275 2eb2dc5a5323e456296334235746f45c 361 Pfam PF01063 Amino-transferase class IV 73 316 7.0E-35 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 APY29_RS18275 2eb2dc5a5323e456296334235746f45c 361 SUPERFAMILY SSF56752 12 357 2.75E-113 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 APY29_RS18275 2eb2dc5a5323e456296334235746f45c 361 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 47 360 5.5E-141 T 28-03-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 APY29_RS18275 2eb2dc5a5323e456296334235746f45c 361 Gene3D G3DSA:3.20.10.10 178 356 7.7E-54 T 28-03-2018 APY29_RS18275 2eb2dc5a5323e456296334235746f45c 361 ProSitePatterns PS00770 Aminotransferases class-IV signature. 236 266 - T 28-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 APY29_RS18275 2eb2dc5a5323e456296334235746f45c 361 Gene3D G3DSA:3.30.470.10 2 177 1.2E-66 T 28-03-2018 APY29_RS00235 ae7f460e67539178f4f5b0f033702352 352 SMART SM00829 11 343 9.7E-6 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APY29_RS00235 ae7f460e67539178f4f5b0f033702352 352 Pfam PF00107 Zinc-binding dehydrogenase 186 309 4.9E-25 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APY29_RS00235 ae7f460e67539178f4f5b0f033702352 352 SUPERFAMILY SSF51735 151 313 2.02E-43 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS00235 ae7f460e67539178f4f5b0f033702352 352 Gene3D G3DSA:3.90.180.10 1 192 9.1E-52 T 28-03-2018 APY29_RS00235 ae7f460e67539178f4f5b0f033702352 352 Gene3D G3DSA:3.40.50.20 254 343 1.9E-7 T 28-03-2018 APY29_RS00235 ae7f460e67539178f4f5b0f033702352 352 Gene3D G3DSA:3.40.50.20 193 253 9.9E-16 T 28-03-2018 APY29_RS00235 ae7f460e67539178f4f5b0f033702352 352 SUPERFAMILY SSF50129 9 172 2.89E-47 T 28-03-2018 IPR011032 GroES-like APY29_RS00235 ae7f460e67539178f4f5b0f033702352 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 144 1.5E-26 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APY29_RS00235 ae7f460e67539178f4f5b0f033702352 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 APY29_RS00235 ae7f460e67539178f4f5b0f033702352 352 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 179 207 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APY29_RS03385 55c9bfed66376493812ea2839967ab3c 394 Pfam PF13692 Glycosyl transferases group 1 240 359 2.1E-9 T 28-03-2018 APY29_RS03385 55c9bfed66376493812ea2839967ab3c 394 SUPERFAMILY SSF53756 145 387 1.05E-16 T 28-03-2018 APY29_RS03385 55c9bfed66376493812ea2839967ab3c 394 Gene3D G3DSA:3.40.50.2000 211 367 1.6E-17 T 28-03-2018 APY29_RS07250 96292a21dfd231e2ce3c1b44409057f9 453 Gene3D G3DSA:1.25.60.10 4 127 2.7E-19 T 28-03-2018 APY29_RS07250 96292a21dfd231e2ce3c1b44409057f9 453 SUPERFAMILY SSF54631 138 277 2.15E-25 T 28-03-2018 APY29_RS07250 96292a21dfd231e2ce3c1b44409057f9 453 Pfam PF00571 CBS domain 221 257 9.2E-4 T 28-03-2018 IPR000644 CBS domain APY29_RS07250 96292a21dfd231e2ce3c1b44409057f9 453 Gene3D G3DSA:1.10.357.20 279 452 1.5E-34 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 APY29_RS07250 96292a21dfd231e2ce3c1b44409057f9 453 SUPERFAMILY SSF161093 280 451 2.35E-49 T 28-03-2018 APY29_RS07250 96292a21dfd231e2ce3c1b44409057f9 453 Pfam PF01769 Divalent cation transporter 323 444 7.7E-27 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 APY29_RS07250 96292a21dfd231e2ce3c1b44409057f9 453 Pfam PF03448 MgtE intracellular N domain 37 137 3.0E-27 T 28-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain APY29_RS07250 96292a21dfd231e2ce3c1b44409057f9 453 TIGRFAM TIGR00400 mgtE: magnesium transporter 21 451 5.6E-87 T 28-03-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 APY29_RS07250 96292a21dfd231e2ce3c1b44409057f9 453 SUPERFAMILY SSF158791 13 136 9.29E-30 T 28-03-2018 APY29_RS07250 96292a21dfd231e2ce3c1b44409057f9 453 Gene3D G3DSA:3.10.580.10 128 267 1.6E-16 T 28-03-2018 APY29_RS07250 96292a21dfd231e2ce3c1b44409057f9 453 SMART SM00924 36 139 1.1E-37 T 28-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain APY29_RS05140 5e0df883a1ee3a9bbaa403e0ed12e58f 141 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 46 119 5.1E-12 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS05140 5e0df883a1ee3a9bbaa403e0ed12e58f 141 Gene3D G3DSA:1.10.760.10 20 139 1.4E-15 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS05140 5e0df883a1ee3a9bbaa403e0ed12e58f 141 SUPERFAMILY SSF46626 2 129 2.62E-20 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS21950 76a2f5698a2b3cda9610f43b387c2b4c 210 Gene3D G3DSA:1.10.10.60 1 68 1.9E-22 T 28-03-2018 APY29_RS21950 76a2f5698a2b3cda9610f43b387c2b4c 210 SUPERFAMILY SSF48498 94 207 4.05E-11 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APY29_RS21950 76a2f5698a2b3cda9610f43b387c2b4c 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 9.4E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS21950 76a2f5698a2b3cda9610f43b387c2b4c 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 9.4E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS21950 76a2f5698a2b3cda9610f43b387c2b4c 210 Gene3D G3DSA:1.10.357.10 69 210 1.8E-22 T 28-03-2018 APY29_RS21950 76a2f5698a2b3cda9610f43b387c2b4c 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 34 64 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APY29_RS21950 76a2f5698a2b3cda9610f43b387c2b4c 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 8.6E-19 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS21950 76a2f5698a2b3cda9610f43b387c2b4c 210 SUPERFAMILY SSF46689 10 89 3.54E-21 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS21950 76a2f5698a2b3cda9610f43b387c2b4c 210 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 153 207 5.2E-19 T 28-03-2018 APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 Gene3D G3DSA:1.25.40.20 733 807 8.8E-20 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 Gene3D G3DSA:1.25.40.20 392 466 1.1E-18 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 Gene3D G3DSA:1.25.40.20 467 599 3.9E-16 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 Pfam PF12796 Ankyrin repeats (3 copies) 826 912 6.6E-9 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 Pfam PF12796 Ankyrin repeats (3 copies) 319 399 7.1E-11 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 Pfam PF12796 Ankyrin repeats (3 copies) 693 783 1.0E-6 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 Pfam PF12796 Ankyrin repeats (3 copies) 407 470 2.0E-6 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 Gene3D G3DSA:1.25.40.20 823 895 2.0E-18 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 SUPERFAMILY SSF48403 619 806 2.18E-29 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 Pfam PF00023 Ankyrin repeat 918 949 0.0015 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 Gene3D G3DSA:1.25.40.20 600 672 6.6E-5 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 Gene3D G3DSA:1.25.40.20 673 732 1.9E-6 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 SMART SM00248 304 336 7.6 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 SMART SM00248 786 847 4100.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 SMART SM00248 753 782 0.026 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 SMART SM00248 884 913 3.8 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 SMART SM00248 720 749 1000.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 SMART SM00248 681 716 390.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 SMART SM00248 404 435 870.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 SMART SM00248 373 402 4.9 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 SMART SM00248 1035 1064 0.33 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 SMART SM00248 917 946 1.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 SMART SM00248 950 987 21.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 SMART SM00248 472 501 310.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 SMART SM00248 235 264 700.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 SMART SM00248 439 468 8.4E-4 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 SMART SM00248 340 369 0.0098 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 SMART SM00248 851 880 0.24 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 SMART SM00248 505 539 180.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 Gene3D G3DSA:1.25.40.20 331 391 1.6E-20 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 SUPERFAMILY SSF48403 240 560 3.03E-46 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 Gene3D G3DSA:1.25.40.20 231 330 3.2E-14 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 Gene3D G3DSA:1.25.40.20 896 1006 1.1E-18 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 Gene3D G3DSA:1.25.40.20 1014 1088 1.7E-12 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS01710 84506aa1ea32952ed47cdb5cac8af11b 1106 SUPERFAMILY SSF48403 825 1087 3.85E-44 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS17560 7dfbf2a57ab139fca07eff5fb26ed733 255 SMART SM00849 11 165 7.4E-34 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS17560 7dfbf2a57ab139fca07eff5fb26ed733 255 PIRSF PIRSF005457 1 253 2.7E-92 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 APY29_RS17560 7dfbf2a57ab139fca07eff5fb26ed733 255 Pfam PF00753 Metallo-beta-lactamase superfamily 16 165 2.7E-18 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS17560 7dfbf2a57ab139fca07eff5fb26ed733 255 SUPERFAMILY SSF56281 1 254 2.62E-66 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS17560 7dfbf2a57ab139fca07eff5fb26ed733 255 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 253 2.4E-101 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 APY29_RS17560 7dfbf2a57ab139fca07eff5fb26ed733 255 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 253 43.453 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 APY29_RS17560 7dfbf2a57ab139fca07eff5fb26ed733 255 Gene3D G3DSA:3.60.15.10 1 253 1.6E-67 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS17560 7dfbf2a57ab139fca07eff5fb26ed733 255 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 253 2.2E-26 T 28-03-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 APY29_RS00030 a07147e140c0256ae34cf59227ed13d7 268 Gene3D G3DSA:3.30.2010.10 47 145 5.4E-20 T 28-03-2018 APY29_RS00030 a07147e140c0256ae34cf59227ed13d7 268 Pfam PF01435 Peptidase family M48 60 246 7.4E-37 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 APY29_RS20690 e7c609c3b13f31bb194ce6ae38ae177e 230 ProSitePatterns PS00042 Crp-type HTH domain signature. 188 211 - T 28-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 APY29_RS20690 e7c609c3b13f31bb194ce6ae38ae177e 230 Gene3D G3DSA:2.60.120.10 18 162 4.0E-23 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS20690 e7c609c3b13f31bb194ce6ae38ae177e 230 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 186 202 2.5E-6 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APY29_RS20690 e7c609c3b13f31bb194ce6ae38ae177e 230 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 202 217 2.5E-6 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APY29_RS20690 e7c609c3b13f31bb194ce6ae38ae177e 230 SMART SM00100 18 137 6.5E-22 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain APY29_RS20690 e7c609c3b13f31bb194ce6ae38ae177e 230 Gene3D G3DSA:1.10.10.10 163 228 2.7E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS20690 e7c609c3b13f31bb194ce6ae38ae177e 230 SUPERFAMILY SSF46785 159 227 6.74E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS20690 e7c609c3b13f31bb194ce6ae38ae177e 230 SMART SM00419 180 228 2.5E-12 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APY29_RS20690 e7c609c3b13f31bb194ce6ae38ae177e 230 Pfam PF00325 Bacterial regulatory proteins, crp family 186 217 8.4E-14 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APY29_RS20690 e7c609c3b13f31bb194ce6ae38ae177e 230 Pfam PF00027 Cyclic nucleotide-binding domain 36 124 3.7E-19 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain APY29_RS20690 e7c609c3b13f31bb194ce6ae38ae177e 230 SUPERFAMILY SSF51206 24 155 2.23E-24 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like APY29_RS13800 d57cb792dfa296ad3f00566f005d1c5b 497 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 248 6.3E-55 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APY29_RS13800 d57cb792dfa296ad3f00566f005d1c5b 497 SUPERFAMILY SSF53067 1 248 6.64E-55 T 28-03-2018 APY29_RS13800 d57cb792dfa296ad3f00566f005d1c5b 497 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 352 373 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 APY29_RS13800 d57cb792dfa296ad3f00566f005d1c5b 497 Gene3D G3DSA:3.30.420.40 1 245 2.3E-63 T 28-03-2018 APY29_RS13800 d57cb792dfa296ad3f00566f005d1c5b 497 TIGRFAM TIGR01312 XylB: xylulokinase 5 486 5.5E-158 T 28-03-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 APY29_RS13800 d57cb792dfa296ad3f00566f005d1c5b 497 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 441 2.5E-31 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APY29_RS13800 d57cb792dfa296ad3f00566f005d1c5b 497 Gene3D G3DSA:3.30.420.40 246 496 2.6E-58 T 28-03-2018 APY29_RS13800 d57cb792dfa296ad3f00566f005d1c5b 497 PIRSF PIRSF000538 1 496 1.6E-111 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 APY29_RS13800 d57cb792dfa296ad3f00566f005d1c5b 497 SUPERFAMILY SSF53067 252 494 2.29E-53 T 28-03-2018 APY29_RS13500 1d76e66763b653095440fc95970d8299 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 28-03-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 APY29_RS13500 1d76e66763b653095440fc95970d8299 431 Pfam PF00815 Histidinol dehydrogenase 26 427 2.3E-161 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 APY29_RS13500 1d76e66763b653095440fc95970d8299 431 PIRSF PIRSF000099 1 429 8.9E-158 T 28-03-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 APY29_RS13500 1d76e66763b653095440fc95970d8299 431 SUPERFAMILY SSF53720 3 427 7.45E-79 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APY29_RS13500 1d76e66763b653095440fc95970d8299 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 426 1.0E-158 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 APY29_RS13500 1d76e66763b653095440fc95970d8299 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 427 40.598 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 APY29_RS13500 1d76e66763b653095440fc95970d8299 431 Gene3D G3DSA:3.40.50.1980 226 371 1.0E-66 T 28-03-2018 APY29_RS13500 1d76e66763b653095440fc95970d8299 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 3.7E-93 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 APY29_RS13500 1d76e66763b653095440fc95970d8299 431 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 3.7E-93 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 APY29_RS13500 1d76e66763b653095440fc95970d8299 431 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 3.7E-93 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 APY29_RS13500 1d76e66763b653095440fc95970d8299 431 PRINTS PR00083 Histidinol dehydrogenase signature 169 195 3.7E-93 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 APY29_RS13500 1d76e66763b653095440fc95970d8299 431 PRINTS PR00083 Histidinol dehydrogenase signature 199 224 3.7E-93 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 APY29_RS13500 1d76e66763b653095440fc95970d8299 431 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 3.7E-93 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 APY29_RS13500 1d76e66763b653095440fc95970d8299 431 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 3.7E-93 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 APY29_RS13500 1d76e66763b653095440fc95970d8299 431 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 3.7E-93 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 APY29_RS13500 1d76e66763b653095440fc95970d8299 431 Gene3D G3DSA:3.40.50.1980 26 225 3.2E-82 T 28-03-2018 APY29_RS10195 510688eb3b72176d5238c82e40ceebf5 188 SUPERFAMILY SSF50104 5 65 4.33E-17 T 28-03-2018 IPR008991 Translation protein SH3-like domain APY29_RS10195 510688eb3b72176d5238c82e40ceebf5 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 7.6E-73 T 28-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 APY29_RS10195 510688eb3b72176d5238c82e40ceebf5 188 Gene3D G3DSA:2.30.30.30 4 63 3.9E-19 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 APY29_RS10195 510688eb3b72176d5238c82e40ceebf5 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 6 62 5.3E-21 T 28-03-2018 IPR013185 Translation elongation factor, KOW-like APY29_RS10195 510688eb3b72176d5238c82e40ceebf5 188 SUPERFAMILY SSF50249 130 187 4.11E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS10195 510688eb3b72176d5238c82e40ceebf5 188 SMART SM00841 131 186 4.5E-32 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 APY29_RS10195 510688eb3b72176d5238c82e40ceebf5 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.423 T 28-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 APY29_RS10195 510688eb3b72176d5238c82e40ceebf5 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 2.7E-19 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 APY29_RS10195 510688eb3b72176d5238c82e40ceebf5 188 SUPERFAMILY SSF50249 69 128 3.98E-15 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS10195 510688eb3b72176d5238c82e40ceebf5 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.5E-25 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 APY29_RS10195 510688eb3b72176d5238c82e40ceebf5 188 Gene3D G3DSA:2.40.50.140 67 129 1.5E-23 T 28-03-2018 APY29_RS10195 510688eb3b72176d5238c82e40ceebf5 188 SMART SM01185 69 123 4.1E-19 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 APY29_RS10195 510688eb3b72176d5238c82e40ceebf5 188 Gene3D G3DSA:2.40.50.140 131 186 7.3E-27 T 28-03-2018 APY29_RS10195 510688eb3b72176d5238c82e40ceebf5 188 PIRSF PIRSF005901 2 188 2.6E-62 T 28-03-2018 IPR020599 Translation elongation factor P/YeiP APY29_RS10195 510688eb3b72176d5238c82e40ceebf5 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 28-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site APY29_RS03765 094f2202d0328814fcb58098b7f8a0b8 335 Gene3D G3DSA:3.40.50.300 1 252 9.8E-80 T 28-03-2018 APY29_RS03765 094f2202d0328814fcb58098b7f8a0b8 335 Pfam PF09383 NIL domain 262 331 6.2E-19 T 28-03-2018 IPR018449 NIL domain APY29_RS03765 094f2202d0328814fcb58098b7f8a0b8 335 Pfam PF00005 ABC transporter 21 169 1.9E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS03765 094f2202d0328814fcb58098b7f8a0b8 335 SUPERFAMILY SSF52540 1 240 1.05E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS03765 094f2202d0328814fcb58098b7f8a0b8 335 SMART SM00930 260 333 5.0E-25 T 28-03-2018 IPR018449 NIL domain APY29_RS03765 094f2202d0328814fcb58098b7f8a0b8 335 Gene3D G3DSA:3.30.70.260 253 335 1.3E-20 T 28-03-2018 APY29_RS03765 094f2202d0328814fcb58098b7f8a0b8 335 SUPERFAMILY SSF55021 260 333 9.96E-17 T 28-03-2018 APY29_RS03765 094f2202d0328814fcb58098b7f8a0b8 335 SMART SM00382 30 217 1.3E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS03765 094f2202d0328814fcb58098b7f8a0b8 335 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS11655 d75f5e096521ccc13f71d81a0e92aff7 251 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 12 224 2.5E-89 T 28-03-2018 IPR014996 Integrating conjugative element protein, PFL4669 APY29_RS11655 d75f5e096521ccc13f71d81a0e92aff7 251 Pfam PF08900 Domain of unknown function (DUF1845) 11 221 4.7E-80 T 28-03-2018 IPR014996 Integrating conjugative element protein, PFL4669 APY29_RS05465 aa44f88cf884c0967a5e269e71060e60 204 Gene3D G3DSA:3.40.50.300 2 204 3.4E-52 T 28-03-2018 APY29_RS05465 aa44f88cf884c0967a5e269e71060e60 204 SUPERFAMILY SSF52540 9 204 2.43E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS05465 aa44f88cf884c0967a5e269e71060e60 204 SMART SM00382 22 204 2.6E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS05465 aa44f88cf884c0967a5e269e71060e60 204 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS05465 aa44f88cf884c0967a5e269e71060e60 204 Pfam PF00005 ABC transporter 24 157 1.6E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS05465 aa44f88cf884c0967a5e269e71060e60 204 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 3 204 1.1E-87 T 28-03-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 APY29_RS01485 96dbd0e56fb1909f99d257c74b2785f7 443 Pfam PF13489 Methyltransferase domain 260 412 1.7E-11 T 28-03-2018 APY29_RS01485 96dbd0e56fb1909f99d257c74b2785f7 443 SMART SM00028 76 109 8.9E-7 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS01485 96dbd0e56fb1909f99d257c74b2785f7 443 SMART SM00028 110 143 13.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS01485 96dbd0e56fb1909f99d257c74b2785f7 443 SMART SM00028 144 181 81.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS01485 96dbd0e56fb1909f99d257c74b2785f7 443 SMART SM00028 42 75 0.15 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS01485 96dbd0e56fb1909f99d257c74b2785f7 443 Gene3D G3DSA:1.25.40.10 3 88 1.0E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS01485 96dbd0e56fb1909f99d257c74b2785f7 443 Gene3D G3DSA:3.40.50.150 233 412 2.1E-22 T 28-03-2018 APY29_RS01485 96dbd0e56fb1909f99d257c74b2785f7 443 SUPERFAMILY SSF53335 238 422 4.26E-28 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS01485 96dbd0e56fb1909f99d257c74b2785f7 443 Gene3D G3DSA:1.25.40.10 123 167 6.9E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS01485 96dbd0e56fb1909f99d257c74b2785f7 443 Gene3D G3DSA:1.25.40.10 89 122 7.1E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS01485 96dbd0e56fb1909f99d257c74b2785f7 443 Gene3D G3DSA:1.25.40.10 168 226 3.7E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS01485 96dbd0e56fb1909f99d257c74b2785f7 443 Pfam PF00515 Tetratricopeptide repeat 76 107 9.9E-8 T 28-03-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 APY29_RS01485 96dbd0e56fb1909f99d257c74b2785f7 443 SUPERFAMILY SSF48452 14 221 4.1E-33 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS06805 0c8ba3a387f2e1e488be01053f36f3f6 131 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 130 1.4E-49 T 28-03-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 APY29_RS06805 0c8ba3a387f2e1e488be01053f36f3f6 131 Gene3D G3DSA:2.40.50.100 6 131 2.3E-46 T 28-03-2018 APY29_RS06805 0c8ba3a387f2e1e488be01053f36f3f6 131 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 42.24 T 28-03-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 APY29_RS06805 0c8ba3a387f2e1e488be01053f36f3f6 131 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 APY29_RS06805 0c8ba3a387f2e1e488be01053f36f3f6 131 Pfam PF01597 Glycine cleavage H-protein 8 128 1.8E-44 T 28-03-2018 IPR033753 Glycine cleavage system H-protein/Simiate APY29_RS06805 0c8ba3a387f2e1e488be01053f36f3f6 131 SUPERFAMILY SSF51230 4 128 9.42E-45 T 28-03-2018 IPR011053 Single hybrid motif APY29_RS10190 a9de2757ee7dfbd940be3ec13c6280a1 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 21 335 4.7E-88 T 28-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase APY29_RS10190 a9de2757ee7dfbd940be3ec13c6280a1 342 Pfam PF13353 4Fe-4S single cluster domain 120 188 4.3E-5 T 28-03-2018 APY29_RS10190 a9de2757ee7dfbd940be3ec13c6280a1 342 SUPERFAMILY SSF102114 114 332 2.75E-18 T 28-03-2018 APY29_RS10190 a9de2757ee7dfbd940be3ec13c6280a1 342 Gene3D G3DSA:3.20.20.70 109 329 8.4E-15 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS10190 a9de2757ee7dfbd940be3ec13c6280a1 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 22 341 3.2E-134 T 28-03-2018 IPR022462 Lysine-2,3-aminomutase-like APY29_RS10190 a9de2757ee7dfbd940be3ec13c6280a1 342 PIRSF PIRSF004911 13 342 6.4E-104 T 28-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase APY29_RS06875 04fcf66790d1afab852d1fe81b8e9d81 947 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 162 1.2E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS06875 04fcf66790d1afab852d1fe81b8e9d81 947 SUPERFAMILY SSF56935 761 947 2.23E-96 T 28-03-2018 APY29_RS06875 04fcf66790d1afab852d1fe81b8e9d81 947 SUPERFAMILY SSF56935 306 628 2.23E-96 T 28-03-2018 APY29_RS06875 04fcf66790d1afab852d1fe81b8e9d81 947 SUPERFAMILY SSF56935 685 731 2.23E-96 T 28-03-2018 APY29_RS06875 04fcf66790d1afab852d1fe81b8e9d81 947 SUPERFAMILY SSF56935 27 222 2.23E-96 T 28-03-2018 APY29_RS06875 04fcf66790d1afab852d1fe81b8e9d81 947 Pfam PF00593 TonB dependent receptor 393 944 5.7E-41 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS06875 04fcf66790d1afab852d1fe81b8e9d81 947 Gene3D G3DSA:2.170.130.10 27 166 3.9E-33 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS06875 04fcf66790d1afab852d1fe81b8e9d81 947 Gene3D G3DSA:2.40.170.20 167 947 1.1E-67 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS02410 9b28ab7cc5b65794e7946070dcce7ed9 364 SUPERFAMILY SSF63380 40 145 1.77E-17 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APY29_RS02410 9b28ab7cc5b65794e7946070dcce7ed9 364 Gene3D G3DSA:3.40.50.80 142 264 6.0E-23 T 28-03-2018 APY29_RS02410 9b28ab7cc5b65794e7946070dcce7ed9 364 SUPERFAMILY SSF54292 263 363 5.9E-19 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APY29_RS02410 9b28ab7cc5b65794e7946070dcce7ed9 364 Pfam PF00175 Oxidoreductase NAD-binding domain 154 254 1.8E-13 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APY29_RS02410 9b28ab7cc5b65794e7946070dcce7ed9 364 SUPERFAMILY SSF52343 145 260 1.22E-27 T 28-03-2018 APY29_RS02410 9b28ab7cc5b65794e7946070dcce7ed9 364 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 288 340 6.6E-6 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APY29_RS02410 9b28ab7cc5b65794e7946070dcce7ed9 364 Gene3D G3DSA:2.40.30.10 48 139 2.9E-15 T 28-03-2018 APY29_RS02410 9b28ab7cc5b65794e7946070dcce7ed9 364 Pfam PF00970 Oxidoreductase FAD-binding domain 53 141 1.7E-9 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 APY29_RS02410 9b28ab7cc5b65794e7946070dcce7ed9 364 PRINTS PR00406 Cytochrome B5 reductase signature 96 103 1.3E-7 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 APY29_RS02410 9b28ab7cc5b65794e7946070dcce7ed9 364 PRINTS PR00406 Cytochrome B5 reductase signature 75 86 1.3E-7 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 APY29_RS02410 9b28ab7cc5b65794e7946070dcce7ed9 364 PRINTS PR00406 Cytochrome B5 reductase signature 153 172 1.3E-7 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 APY29_RS02410 9b28ab7cc5b65794e7946070dcce7ed9 364 PRINTS PR00406 Cytochrome B5 reductase signature 240 248 1.3E-7 T 28-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 APY29_RS02410 9b28ab7cc5b65794e7946070dcce7ed9 364 Gene3D G3DSA:3.10.20.30 265 363 2.3E-14 T 28-03-2018 IPR012675 Beta-grasp domain APY29_RS06745 e70f4338c0934a96a5aa72826c88bc64 561 PIRSF PIRSF001092 70 553 2.5E-87 T 28-03-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|Reactome: R-HSA-6798695 APY29_RS06745 e70f4338c0934a96a5aa72826c88bc64 561 Gene3D G3DSA:3.20.20.80 82 449 4.3E-117 T 28-03-2018 APY29_RS06745 e70f4338c0934a96a5aa72826c88bc64 561 Pfam PF16757 Alpha-L-fucosidase C-terminal domain 480 554 5.6E-8 T 28-03-2018 IPR031919 Alpha-L-fucosidase, C-terminal KEGG: 00511+3.2.1.51|Reactome: R-HSA-6798695 APY29_RS06745 e70f4338c0934a96a5aa72826c88bc64 561 SUPERFAMILY SSF51445 87 449 1.64E-106 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS06745 e70f4338c0934a96a5aa72826c88bc64 561 SMART SM00812 87 509 1.6E-217 T 28-03-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|Reactome: R-HSA-6798695 APY29_RS06745 e70f4338c0934a96a5aa72826c88bc64 561 Gene3D G3DSA:2.60.40.1180 450 561 3.7E-28 T 28-03-2018 APY29_RS06745 e70f4338c0934a96a5aa72826c88bc64 561 Pfam PF01120 Alpha-L-fucosidase 82 445 1.7E-99 T 28-03-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|Reactome: R-HSA-6798695 APY29_RS15015 28fc9ca6ab3cc13c71cc4d1fc622c67d 391 Pfam PF00356 Bacterial regulatory proteins, lacI family 39 84 1.7E-11 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS15015 28fc9ca6ab3cc13c71cc4d1fc622c67d 391 Gene3D G3DSA:1.10.10.10 32 51 0.012 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS15015 28fc9ca6ab3cc13c71cc4d1fc622c67d 391 SUPERFAMILY SSF53822 97 368 7.07E-59 T 28-03-2018 IPR028082 Periplasmic binding protein-like I APY29_RS15015 28fc9ca6ab3cc13c71cc4d1fc622c67d 391 Gene3D G3DSA:1.10.260.40 52 93 7.3E-17 T 28-03-2018 APY29_RS15015 28fc9ca6ab3cc13c71cc4d1fc622c67d 391 SUPERFAMILY SSF47413 37 95 6.03E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APY29_RS15015 28fc9ca6ab3cc13c71cc4d1fc622c67d 391 Gene3D G3DSA:3.40.50.2300 204 367 1.9E-37 T 28-03-2018 APY29_RS15015 28fc9ca6ab3cc13c71cc4d1fc622c67d 391 Gene3D G3DSA:3.40.50.2300 94 203 1.5E-26 T 28-03-2018 APY29_RS15015 28fc9ca6ab3cc13c71cc4d1fc622c67d 391 SMART SM00354 37 107 1.2E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS15015 28fc9ca6ab3cc13c71cc4d1fc622c67d 391 Pfam PF13377 Periplasmic binding protein-like domain 206 364 6.2E-32 T 28-03-2018 APY29_RS19670 72084a589bf8200355a97bf79f534489 472 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 3 227 24.012 T 28-03-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 APY29_RS19670 72084a589bf8200355a97bf79f534489 472 Pfam PF03330 Lytic transglycolase 135 224 6.2E-24 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain APY29_RS19670 72084a589bf8200355a97bf79f534489 472 Gene3D G3DSA:3.30.70.1070 397 472 1.9E-9 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 APY29_RS19670 72084a589bf8200355a97bf79f534489 472 Gene3D G3DSA:2.40.40.10 116 225 8.2E-24 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain APY29_RS19670 72084a589bf8200355a97bf79f534489 472 Pfam PF05036 Sporulation related domain 397 470 2.1E-11 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 APY29_RS19670 72084a589bf8200355a97bf79f534489 472 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 137 237 3.7E-41 T 28-03-2018 IPR012997 Rare lipoprotein A APY29_RS19670 72084a589bf8200355a97bf79f534489 472 SUPERFAMILY SSF50685 123 220 4.19E-10 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain APY29_RS19670 72084a589bf8200355a97bf79f534489 472 SUPERFAMILY SSF110997 399 469 4.58E-7 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 APY29_RS01835 20aac14d58988cc98210f13e2da55020 253 SUPERFAMILY SSF63380 4 109 1.68E-18 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APY29_RS01835 20aac14d58988cc98210f13e2da55020 253 Gene3D G3DSA:2.40.30.10 2 105 1.4E-17 T 28-03-2018 APY29_RS01835 20aac14d58988cc98210f13e2da55020 253 SUPERFAMILY SSF52343 112 247 2.36E-33 T 28-03-2018 APY29_RS01835 20aac14d58988cc98210f13e2da55020 253 Gene3D G3DSA:3.40.50.80 106 250 1.8E-24 T 28-03-2018 APY29_RS01835 20aac14d58988cc98210f13e2da55020 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 213 221 1.6E-6 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APY29_RS01835 20aac14d58988cc98210f13e2da55020 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 157 168 1.6E-6 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APY29_RS01835 20aac14d58988cc98210f13e2da55020 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 54 61 1.6E-6 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APY29_RS01835 20aac14d58988cc98210f13e2da55020 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 118 137 1.6E-6 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APY29_RS01835 20aac14d58988cc98210f13e2da55020 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 101 110 1.9E-6 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 APY29_RS01835 20aac14d58988cc98210f13e2da55020 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 213 221 1.9E-6 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 APY29_RS01835 20aac14d58988cc98210f13e2da55020 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 34 46 1.9E-6 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 APY29_RS01835 20aac14d58988cc98210f13e2da55020 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 145 154 1.9E-6 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 APY29_RS01835 20aac14d58988cc98210f13e2da55020 253 Pfam PF00970 Oxidoreductase FAD-binding domain 7 106 2.5E-11 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 APY29_RS01835 20aac14d58988cc98210f13e2da55020 253 Pfam PF00175 Oxidoreductase NAD-binding domain 119 225 1.9E-17 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APY29_RS01005 f04380bb172c40851a0920717544b419 381 Pfam PF14020 Protein of unknown function (DUF4236) 6 59 6.7E-16 T 28-03-2018 IPR025330 Domain of unknown function DUF4236 APY29_RS14145 b1971f296dcf22e6b0ec974a9382b6a1 446 SMART SM00116 231 280 16.0 T 28-03-2018 IPR000644 CBS domain APY29_RS14145 b1971f296dcf22e6b0ec974a9382b6a1 446 SMART SM00116 292 340 0.88 T 28-03-2018 IPR000644 CBS domain APY29_RS14145 b1971f296dcf22e6b0ec974a9382b6a1 446 Pfam PF03471 Transporter associated domain 358 436 3.5E-20 T 28-03-2018 IPR005170 Transporter-associated domain APY29_RS14145 b1971f296dcf22e6b0ec974a9382b6a1 446 Pfam PF00571 CBS domain 292 340 2.4E-6 T 28-03-2018 IPR000644 CBS domain APY29_RS14145 b1971f296dcf22e6b0ec974a9382b6a1 446 Pfam PF01595 Domain of unknown function DUF21 5 207 7.3E-47 T 28-03-2018 IPR002550 Domain of unknown function DUF21 APY29_RS14145 b1971f296dcf22e6b0ec974a9382b6a1 446 SUPERFAMILY SSF56176 355 442 3.54E-23 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APY29_RS14145 b1971f296dcf22e6b0ec974a9382b6a1 446 Gene3D G3DSA:3.30.465.10 350 437 4.6E-24 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APY29_RS14145 b1971f296dcf22e6b0ec974a9382b6a1 446 SUPERFAMILY SSF54631 209 341 6.37E-26 T 28-03-2018 APY29_RS14145 b1971f296dcf22e6b0ec974a9382b6a1 446 Gene3D G3DSA:3.10.580.10 202 349 6.5E-24 T 28-03-2018 APY29_RS14145 b1971f296dcf22e6b0ec974a9382b6a1 446 SMART SM01091 356 437 1.9E-31 T 28-03-2018 IPR005170 Transporter-associated domain APY29_RS01980 a20f7baf9e419e6422a8a4b3721e5d4b 330 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 217 2.9E-12 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 APY29_RS01980 a20f7baf9e419e6422a8a4b3721e5d4b 330 Gene3D G3DSA:3.40.50.720 1 309 8.6E-26 T 28-03-2018 APY29_RS01980 a20f7baf9e419e6422a8a4b3721e5d4b 330 SUPERFAMILY SSF51735 6 305 3.34E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS18000 fd41df51847764adf7c1f7d1e0a8cb77 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 3.7E-23 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS18000 fd41df51847764adf7c1f7d1e0a8cb77 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.216 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS18000 fd41df51847764adf7c1f7d1e0a8cb77 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 102 3.4E-32 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS18000 fd41df51847764adf7c1f7d1e0a8cb77 105 SUPERFAMILY SSF50104 3 99 3.31E-29 T 28-03-2018 IPR008991 Translation protein SH3-like domain APY29_RS18000 fd41df51847764adf7c1f7d1e0a8cb77 105 Pfam PF00467 KOW motif 7 35 4.5E-6 T 28-03-2018 IPR005824 KOW APY29_RS18000 fd41df51847764adf7c1f7d1e0a8cb77 105 Gene3D G3DSA:2.30.30.30 2 92 2.5E-26 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 APY29_RS18000 fd41df51847764adf7c1f7d1e0a8cb77 105 SMART SM00739 4 31 1.3E-5 T 28-03-2018 IPR005824 KOW APY29_RS10670 e769bfcb900c514fb197283635aa219e 485 SMART SM01240 7 471 0.0 T 28-03-2018 APY29_RS10670 e769bfcb900c514fb197283635aa219e 485 SMART SM00116 96 143 2.7E-11 T 28-03-2018 IPR000644 CBS domain APY29_RS10670 e769bfcb900c514fb197283635aa219e 485 SMART SM00116 157 205 1.6E-7 T 28-03-2018 IPR000644 CBS domain APY29_RS10670 e769bfcb900c514fb197283635aa219e 485 Pfam PF00571 CBS domain 148 201 5.6E-6 T 28-03-2018 IPR000644 CBS domain APY29_RS10670 e769bfcb900c514fb197283635aa219e 485 Pfam PF00571 CBS domain 95 139 5.8E-11 T 28-03-2018 IPR000644 CBS domain APY29_RS10670 e769bfcb900c514fb197283635aa219e 485 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 484 82.133 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 APY29_RS10670 e769bfcb900c514fb197283635aa219e 485 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 471 2.1E-157 T 28-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 APY29_RS10670 e769bfcb900c514fb197283635aa219e 485 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 452 2.9E-188 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 APY29_RS10670 e769bfcb900c514fb197283635aa219e 485 SUPERFAMILY SSF54631 94 202 8.97E-28 T 28-03-2018 APY29_RS10670 e769bfcb900c514fb197283635aa219e 485 SUPERFAMILY SSF51412 216 475 2.35E-124 T 28-03-2018 APY29_RS10670 e769bfcb900c514fb197283635aa219e 485 SUPERFAMILY SSF51412 2 90 2.35E-124 T 28-03-2018 APY29_RS10670 e769bfcb900c514fb197283635aa219e 485 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 28-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 APY29_RS10670 e769bfcb900c514fb197283635aa219e 485 Gene3D G3DSA:3.20.20.70 1 479 3.4E-113 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS10670 e769bfcb900c514fb197283635aa219e 485 PIRSF PIRSF000130 1 485 1.2E-201 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 APY29_RS17935 62daab23d1271f12095d2da269f76b2e 332 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 326 2.0E-35 T 28-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS17935 62daab23d1271f12095d2da269f76b2e 332 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 251 307 1.3E-23 T 28-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS17935 62daab23d1271f12095d2da269f76b2e 332 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 316 34.74 T 28-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS17935 62daab23d1271f12095d2da269f76b2e 332 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 227 1.7E-24 T 28-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS17935 62daab23d1271f12095d2da269f76b2e 332 Gene3D G3DSA:1.10.150.20 246 327 1.5E-27 T 28-03-2018 APY29_RS17935 62daab23d1271f12095d2da269f76b2e 332 SUPERFAMILY SSF55257 9 53 1.96E-31 T 28-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS17935 62daab23d1271f12095d2da269f76b2e 332 SUPERFAMILY SSF55257 178 232 1.96E-31 T 28-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS17935 62daab23d1271f12095d2da269f76b2e 332 SUPERFAMILY SSF56553 53 177 2.35E-42 T 28-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS17935 62daab23d1271f12095d2da269f76b2e 332 Gene3D G3DSA:3.30.1360.10 111 230 9.8E-29 T 28-03-2018 APY29_RS17935 62daab23d1271f12095d2da269f76b2e 332 Gene3D G3DSA:3.30.1360.10 4 89 9.6E-18 T 28-03-2018 APY29_RS17935 62daab23d1271f12095d2da269f76b2e 332 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 315 4.2E-109 T 28-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS17935 62daab23d1271f12095d2da269f76b2e 332 SMART SM00662 23 233 1.2E-106 T 28-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS17935 62daab23d1271f12095d2da269f76b2e 332 SUPERFAMILY SSF47789 250 323 1.83E-25 T 28-03-2018 APY29_RS17935 62daab23d1271f12095d2da269f76b2e 332 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 154 1.7E-24 T 28-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS10405 4b391e501f6bbc47fb2ff3e64e32cfcd 421 Pfam PF07690 Major Facilitator Superfamily 25 357 6.8E-17 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS10405 4b391e501f6bbc47fb2ff3e64e32cfcd 421 Gene3D G3DSA:1.20.1250.20 12 202 5.7E-17 T 28-03-2018 APY29_RS10405 4b391e501f6bbc47fb2ff3e64e32cfcd 421 Gene3D G3DSA:1.20.1250.20 215 407 4.0E-15 T 28-03-2018 APY29_RS10405 4b391e501f6bbc47fb2ff3e64e32cfcd 421 SUPERFAMILY SSF103473 15 398 3.92E-42 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS09220 b54ccb488ab433e84a0067465bcc3601 282 Pfam PF00753 Metallo-beta-lactamase superfamily 33 230 6.1E-17 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS09220 b54ccb488ab433e84a0067465bcc3601 282 SUPERFAMILY SSF56281 34 275 2.49E-28 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS09220 b54ccb488ab433e84a0067465bcc3601 282 Gene3D G3DSA:3.60.15.10 15 276 2.4E-30 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS09220 b54ccb488ab433e84a0067465bcc3601 282 SMART SM00849 34 269 1.7E-14 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS15610 79f4ceb2c9f6258e19e73514551cb3fa 869 SMART SM00471 446 593 8.9E-9 T 28-03-2018 IPR003607 HD/PDEase domain APY29_RS15610 79f4ceb2c9f6258e19e73514551cb3fa 869 Gene3D G3DSA:3.30.460.10 37 169 3.8E-17 T 28-03-2018 APY29_RS15610 79f4ceb2c9f6258e19e73514551cb3fa 869 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 34 866 3.8E-227 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 APY29_RS15610 79f4ceb2c9f6258e19e73514551cb3fa 869 Pfam PF01966 HD domain 451 570 2.2E-13 T 28-03-2018 IPR006674 HD domain APY29_RS15610 79f4ceb2c9f6258e19e73514551cb3fa 869 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 869 260.039 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 APY29_RS15610 79f4ceb2c9f6258e19e73514551cb3fa 869 SUPERFAMILY SSF81301 22 174 3.38E-17 T 28-03-2018 APY29_RS15610 79f4ceb2c9f6258e19e73514551cb3fa 869 Pfam PF08335 GlnD PII-uridylyltransferase 178 316 8.7E-31 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 APY29_RS15610 79f4ceb2c9f6258e19e73514551cb3fa 869 SUPERFAMILY SSF55021 688 757 2.91E-5 T 28-03-2018 APY29_RS15610 79f4ceb2c9f6258e19e73514551cb3fa 869 Gene3D G3DSA:3.30.70.260 687 766 7.7E-6 T 28-03-2018 APY29_RS15610 79f4ceb2c9f6258e19e73514551cb3fa 869 SUPERFAMILY SSF55021 795 863 1.67E-10 T 28-03-2018 APY29_RS15610 79f4ceb2c9f6258e19e73514551cb3fa 869 PIRSF PIRSF006288 7 869 8.2E-289 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 APY29_RS15610 79f4ceb2c9f6258e19e73514551cb3fa 869 Gene3D G3DSA:1.20.120.330 177 321 9.8E-21 T 28-03-2018 APY29_RS15610 79f4ceb2c9f6258e19e73514551cb3fa 869 Gene3D G3DSA:3.30.70.260 793 867 1.9E-12 T 28-03-2018 APY29_RS15610 79f4ceb2c9f6258e19e73514551cb3fa 869 SUPERFAMILY SSF81593 198 317 2.67E-9 T 28-03-2018 APY29_RS15610 79f4ceb2c9f6258e19e73514551cb3fa 869 Gene3D G3DSA:1.10.3090.10 365 626 3.4E-38 T 28-03-2018 APY29_RS15610 79f4ceb2c9f6258e19e73514551cb3fa 869 Pfam PF01909 Nucleotidyltransferase domain 73 120 1.2E-4 T 28-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 APY29_RS15610 79f4ceb2c9f6258e19e73514551cb3fa 869 SUPERFAMILY SSF109604 439 541 6.28E-13 T 28-03-2018 APY29_RS20895 41e36cd6fe713bf4b0e0d2210ced4fc0 505 Gene3D G3DSA:3.30.559.10 278 501 1.5E-46 T 28-03-2018 APY29_RS20895 41e36cd6fe713bf4b0e0d2210ced4fc0 505 Pfam PF02817 e3 binding domain 169 203 4.6E-9 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 APY29_RS20895 41e36cd6fe713bf4b0e0d2210ced4fc0 505 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 298 497 1.7E-45 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 APY29_RS20895 41e36cd6fe713bf4b0e0d2210ced4fc0 505 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 APY29_RS20895 41e36cd6fe713bf4b0e0d2210ced4fc0 505 SUPERFAMILY SSF51230 5 91 1.57E-23 T 28-03-2018 IPR011053 Single hybrid motif APY29_RS20895 41e36cd6fe713bf4b0e0d2210ced4fc0 505 Gene3D G3DSA:2.40.50.100 1 84 2.8E-15 T 28-03-2018 APY29_RS20895 41e36cd6fe713bf4b0e0d2210ced4fc0 505 SUPERFAMILY SSF52777 288 501 9.34E-53 T 28-03-2018 APY29_RS20895 41e36cd6fe713bf4b0e0d2210ced4fc0 505 Gene3D G3DSA:4.10.320.10 166 216 2.9E-13 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 APY29_RS20895 41e36cd6fe713bf4b0e0d2210ced4fc0 505 SUPERFAMILY SSF47005 169 207 1.31E-8 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 APY29_RS20895 41e36cd6fe713bf4b0e0d2210ced4fc0 505 Pfam PF00364 Biotin-requiring enzyme 6 77 2.1E-17 T 28-03-2018 IPR000089 Biotin/lipoyl attachment APY29_RS00805 7c5b5d46c71f426bcc78a6f208690b96 162 Pfam PF12802 MarR family 33 93 3.0E-17 T 28-03-2018 APY29_RS00805 7c5b5d46c71f426bcc78a6f208690b96 162 SUPERFAMILY SSF46785 8 146 5.88E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS00805 7c5b5d46c71f426bcc78a6f208690b96 162 SMART SM00347 28 129 7.6E-13 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS00805 7c5b5d46c71f426bcc78a6f208690b96 162 Gene3D G3DSA:1.10.10.10 1 152 3.3E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS21695 dca32d5f9c24a22052f60ad79c1dfc66 131 Pfam PF11533 Protein of unknown function (DUF3225) 7 127 2.6E-52 T 28-03-2018 IPR024507 Protein of unknown function DUF3225 APY29_RS21695 dca32d5f9c24a22052f60ad79c1dfc66 131 SUPERFAMILY SSF54427 7 126 5.05E-33 T 28-03-2018 IPR032710 NTF2-like domain APY29_RS21695 dca32d5f9c24a22052f60ad79c1dfc66 131 Gene3D G3DSA:3.10.450.50 5 129 1.3E-19 T 28-03-2018 APY29_RS02245 d81562c8835058ffc39a3c87c659d617 200 SMART SM00421 137 194 3.6E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS02245 d81562c8835058ffc39a3c87c659d617 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 6.7E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS02245 d81562c8835058ffc39a3c87c659d617 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 6.7E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS02245 d81562c8835058ffc39a3c87c659d617 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 6.7E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS02245 d81562c8835058ffc39a3c87c659d617 200 SMART SM00448 2 115 6.0E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS02245 d81562c8835058ffc39a3c87c659d617 200 Pfam PF00072 Response regulator receiver domain 4 115 8.9E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS02245 d81562c8835058ffc39a3c87c659d617 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 139 194 2.1E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS02245 d81562c8835058ffc39a3c87c659d617 200 Gene3D G3DSA:3.40.50.2300 1 125 6.5E-34 T 28-03-2018 APY29_RS02245 d81562c8835058ffc39a3c87c659d617 200 SUPERFAMILY SSF46894 128 200 4.08E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS02245 d81562c8835058ffc39a3c87c659d617 200 SUPERFAMILY SSF52172 1 128 7.4E-32 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS02245 d81562c8835058ffc39a3c87c659d617 200 Gene3D G3DSA:1.10.10.10 126 200 1.5E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS19810 37b51c4c2c6f29de0f1850c4af6af76c 305 Gene3D G3DSA:1.10.150.130 2 118 1.1E-24 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal APY29_RS19810 37b51c4c2c6f29de0f1850c4af6af76c 305 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 6 300 2.3E-110 T 28-03-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 APY29_RS19810 37b51c4c2c6f29de0f1850c4af6af76c 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 2 298 59.091 T 28-03-2018 IPR023009 Tyrosine recombinase XerC/XerD APY29_RS19810 37b51c4c2c6f29de0f1850c4af6af76c 305 Pfam PF00589 Phage integrase family 119 284 5.8E-47 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS19810 37b51c4c2c6f29de0f1850c4af6af76c 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 4 97 8.2E-18 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APY29_RS19810 37b51c4c2c6f29de0f1850c4af6af76c 305 SUPERFAMILY SSF56349 10 291 2.03E-53 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APY29_RS19810 37b51c4c2c6f29de0f1850c4af6af76c 305 Gene3D G3DSA:1.10.443.10 119 292 2.4E-45 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 542 558 1.2E-22 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 511 522 1.2E-22 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 565 573 1.2E-22 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 498 507 1.2E-22 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 404 411 1.2E-22 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 286 296 1.2E-22 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 473 492 1.2E-22 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 Gene3D G3DSA:3.40.50.80 462 613 2.9E-35 T 28-03-2018 APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 Gene3D G3DSA:2.40.30.10 227 456 9.7E-44 T 28-03-2018 APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 Pfam PF00175 Oxidoreductase NAD-binding domain 474 579 2.2E-17 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 SUPERFAMILY SSF52218 68 215 4.95E-43 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 Gene3D G3DSA:3.40.50.360 59 224 1.3E-37 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 SUPERFAMILY SSF52343 462 615 2.62E-47 T 28-03-2018 APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 615 1.2E-256 T 28-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 SUPERFAMILY SSF63380 233 463 1.39E-54 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 PRINTS PR00369 Flavodoxin signature 175 194 3.3E-16 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 PRINTS PR00369 Flavodoxin signature 151 161 3.3E-16 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 PRINTS PR00369 Flavodoxin signature 119 130 3.3E-16 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 PRINTS PR00369 Flavodoxin signature 71 84 3.3E-16 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 PIRSF PIRSF000207 1 615 2.9E-199 T 28-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 Pfam PF00667 FAD binding domain 270 442 9.6E-17 T 28-03-2018 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 APY29_RS05625 872e7d28674ab60405d5929bd078c384 615 Pfam PF00258 Flavodoxin 72 195 3.4E-30 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APY29_RS01440 8eb414e4742dc7931eb816f92224e29a 423 SUPERFAMILY SSF56219 32 286 1.58E-42 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS01440 8eb414e4742dc7931eb816f92224e29a 423 SUPERFAMILY SSF51101 295 420 3.27E-21 T 28-03-2018 IPR001229 Jacalin-like lectin domain APY29_RS01440 8eb414e4742dc7931eb816f92224e29a 423 SMART SM00915 305 422 5.2E-6 T 28-03-2018 IPR001229 Jacalin-like lectin domain APY29_RS01440 8eb414e4742dc7931eb816f92224e29a 423 Gene3D G3DSA:2.100.10.30 295 423 1.7E-18 T 28-03-2018 APY29_RS01440 8eb414e4742dc7931eb816f92224e29a 423 Pfam PF01419 Jacalin-like lectin domain 350 420 1.3E-6 T 28-03-2018 IPR001229 Jacalin-like lectin domain APY29_RS01440 8eb414e4742dc7931eb816f92224e29a 423 Gene3D G3DSA:3.60.10.10 31 288 2.3E-22 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 SUPERFAMILY SSF50621 732 864 3.77E-41 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 SUPERFAMILY SSF53633 9 305 5.0E-56 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 Gene3D G3DSA:3.30.70.260 385 462 2.2E-9 T 28-03-2018 APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 Gene3D G3DSA:3.30.70.260 306 384 8.7E-14 T 28-03-2018 APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 535 553 - T 28-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 504 861 5.8E-92 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 SUPERFAMILY SSF55021 313 405 7.1E-12 T 28-03-2018 APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 PRINTS PR01181 Diaminopimelate decarboxylase signature 553 570 5.1E-13 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 PRINTS PR01181 Diaminopimelate decarboxylase signature 639 648 5.1E-13 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 PRINTS PR01181 Diaminopimelate decarboxylase signature 770 788 5.1E-13 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 PRINTS PR01181 Diaminopimelate decarboxylase signature 853 869 5.1E-13 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 10 460 1.9E-81 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 Gene3D G3DSA:2.40.37.10 738 867 7.2E-37 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 Pfam PF00696 Amino acid kinase family 10 291 4.5E-39 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 ProSitePatterns PS00324 Aspartokinase signature. 12 20 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 Gene3D G3DSA:3.20.20.10 515 737 1.4E-51 T 28-03-2018 IPR029066 PLP-binding barrel APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 PIRSF PIRSF036459 1 869 0.0 T 28-03-2018 IPR011246 Bifunctional diaminopimelate decarboxylase/aspartate kinase APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 SUPERFAMILY SSF55021 389 460 1.91E-9 T 28-03-2018 APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 664 677 1.6E-22 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 535 553 1.6E-22 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 843 856 1.6E-22 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 742 761 1.6E-22 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 555 567 1.6E-22 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 748 843 1.8E-21 T 28-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 Gene3D G3DSA:3.40.1160.10 7 305 2.3E-56 T 28-03-2018 APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 517 752 4.3E-42 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 SUPERFAMILY SSF51419 506 754 4.8E-56 T 28-03-2018 IPR029066 PLP-binding barrel APY29_RS07605 c68bb47d0ee3d08ea8b9d6f39c7ff6c0 869 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 695 711 - T 28-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site APY29_RS16710 7a04dbe871f04b835da81be0992616e9 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 7.0E-38 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS16710 7a04dbe871f04b835da81be0992616e9 86 SUPERFAMILY SSF110324 2 82 8.02E-34 T 28-03-2018 APY29_RS16710 7a04dbe871f04b835da81be0992616e9 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 28-03-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS16710 7a04dbe871f04b835da81be0992616e9 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS16710 7a04dbe871f04b835da81be0992616e9 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.8E-38 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS16710 7a04dbe871f04b835da81be0992616e9 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.8E-38 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS16710 7a04dbe871f04b835da81be0992616e9 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.8E-38 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS16710 7a04dbe871f04b835da81be0992616e9 86 Gene3D G3DSA:2.40.50.100 20 84 2.6E-29 T 28-03-2018 APY29_RS16710 7a04dbe871f04b835da81be0992616e9 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.229 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS16710 7a04dbe871f04b835da81be0992616e9 86 Pfam PF01016 Ribosomal L27 protein 2 82 3.1E-38 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS00335 930cf4bedcd54df6345b42b9a2925310 613 PIRSF PIRSF001589 1 612 4.5E-112 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 APY29_RS00335 930cf4bedcd54df6345b42b9a2925310 613 Gene3D G3DSA:3.40.50.620 229 613 1.5E-42 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS00335 930cf4bedcd54df6345b42b9a2925310 613 SUPERFAMILY SSF56235 1 228 1.89E-52 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APY29_RS00335 930cf4bedcd54df6345b42b9a2925310 613 SUPERFAMILY SSF52402 239 392 8.38E-48 T 28-03-2018 APY29_RS00335 930cf4bedcd54df6345b42b9a2925310 613 SUPERFAMILY SSF52402 471 551 8.38E-48 T 28-03-2018 APY29_RS00335 930cf4bedcd54df6345b42b9a2925310 613 Gene3D G3DSA:3.60.20.10 1 228 2.8E-44 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APY29_RS00335 930cf4bedcd54df6345b42b9a2925310 613 Pfam PF00733 Asparagine synthase 243 591 1.7E-56 T 28-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 APY29_RS00335 930cf4bedcd54df6345b42b9a2925310 613 Pfam PF13537 Glutamine amidotransferase domain 50 169 8.2E-40 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain APY29_RS00335 930cf4bedcd54df6345b42b9a2925310 613 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 549 4.1E-104 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 APY29_RS13745 05e14b9dc6be5fd6c4b2729855401a25 271 PIRSF PIRSF000388 1 271 1.1E-93 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 APY29_RS13745 05e14b9dc6be5fd6c4b2729855401a25 271 SUPERFAMILY SSF51621 10 269 9.03E-97 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APY29_RS13745 05e14b9dc6be5fd6c4b2729855401a25 271 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 269 40.534 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 APY29_RS13745 05e14b9dc6be5fd6c4b2729855401a25 271 Gene3D G3DSA:3.20.20.60 1 269 3.4E-78 T 28-03-2018 APY29_RS13745 05e14b9dc6be5fd6c4b2729855401a25 271 Pfam PF02548 Ketopantoate hydroxymethyltransferase 11 264 1.4E-100 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 APY29_RS13745 05e14b9dc6be5fd6c4b2729855401a25 271 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 15 269 4.7E-96 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 APY29_RS03890 1473ddbded269b68cf2e4013692a9e1d 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 131 2.5E-7 T 28-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03890 1473ddbded269b68cf2e4013692a9e1d 140 Gene3D G3DSA:1.20.5.440 90 130 8.1E-4 T 28-03-2018 APY29_RS03890 1473ddbded269b68cf2e4013692a9e1d 140 SUPERFAMILY SSF51344 3 85 7.32E-23 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03890 1473ddbded269b68cf2e4013692a9e1d 140 SUPERFAMILY SSF46604 87 135 3.14E-10 T 28-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03890 1473ddbded269b68cf2e4013692a9e1d 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 83 1.4E-27 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03890 1473ddbded269b68cf2e4013692a9e1d 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 85 3.0E-37 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03890 1473ddbded269b68cf2e4013692a9e1d 140 Gene3D G3DSA:2.60.15.10 1 89 3.6E-28 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03890 1473ddbded269b68cf2e4013692a9e1d 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 19.612 T 28-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03890 1473ddbded269b68cf2e4013692a9e1d 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 132 2.0E-42 T 28-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS12960 3e9069b2cb12ccdf587a08ca6ddf1a36 126 SUPERFAMILY SSF52172 1 122 1.04E-37 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS12960 3e9069b2cb12ccdf587a08ca6ddf1a36 126 SMART SM00448 1 115 6.5E-35 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS12960 3e9069b2cb12ccdf587a08ca6ddf1a36 126 Pfam PF00072 Response regulator receiver domain 3 115 5.1E-31 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS12960 3e9069b2cb12ccdf587a08ca6ddf1a36 126 Gene3D G3DSA:3.40.50.2300 1 126 9.4E-38 T 28-03-2018 APY29_RS14255 b7a7db0f09b096457bc8b087e8c619e7 223 Gene3D G3DSA:3.40.50.20 3 87 3.4E-8 T 28-03-2018 APY29_RS14255 b7a7db0f09b096457bc8b087e8c619e7 223 Gene3D G3DSA:2.160.10.10 150 219 5.1E-16 T 28-03-2018 APY29_RS14255 b7a7db0f09b096457bc8b087e8c619e7 223 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 163 197 2.5E-5 T 28-03-2018 IPR001451 Hexapeptide repeat APY29_RS14255 b7a7db0f09b096457bc8b087e8c619e7 223 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 127 161 1.9E-7 T 28-03-2018 IPR001451 Hexapeptide repeat APY29_RS14255 b7a7db0f09b096457bc8b087e8c619e7 223 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 APY29_RS14255 b7a7db0f09b096457bc8b087e8c619e7 223 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 6 211 2.9E-60 T 28-03-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like APY29_RS14255 b7a7db0f09b096457bc8b087e8c619e7 223 Gene3D G3DSA:2.160.10.10 88 149 1.7E-12 T 28-03-2018 APY29_RS14255 b7a7db0f09b096457bc8b087e8c619e7 223 SUPERFAMILY SSF51161 6 218 3.6E-37 T 28-03-2018 IPR011004 Trimeric LpxA-like APY29_RS00330 6413e3caa6c89e25dea22d5533f3c9f5 340 Pfam PF13489 Methyltransferase domain 97 245 1.8E-15 T 28-03-2018 APY29_RS00330 6413e3caa6c89e25dea22d5533f3c9f5 340 Gene3D G3DSA:3.40.50.150 57 264 1.8E-20 T 28-03-2018 APY29_RS00330 6413e3caa6c89e25dea22d5533f3c9f5 340 SUPERFAMILY SSF53335 93 263 9.53E-28 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS08645 49f342a71c397fe9121b8bfd946ab11b 690 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 647 689 5.9E-14 T 28-03-2018 IPR020011 Motility protein FimV, C-terminal APY29_RS08645 49f342a71c397fe9121b8bfd946ab11b 690 Gene3D G3DSA:1.20.5.340 353 533 4.3E-5 T 28-03-2018 APY29_RS08645 49f342a71c397fe9121b8bfd946ab11b 690 Gene3D G3DSA:3.10.350.10 212 341 7.9E-4 T 28-03-2018 APY29_RS08645 49f342a71c397fe9121b8bfd946ab11b 690 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 237 310 8.9E-23 T 28-03-2018 IPR020012 Motility protein FimV, N-terminal APY29_RS20085 877981df53a1e7c8090bffce7da273c7 206 Gene3D G3DSA:3.90.1720.10 20 206 3.6E-27 T 28-03-2018 APY29_RS20085 877981df53a1e7c8090bffce7da273c7 206 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 23 202 1.1E-34 T 28-03-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family APY29_RS20085 877981df53a1e7c8090bffce7da273c7 206 SUPERFAMILY SSF54001 23 202 3.92E-33 T 28-03-2018 APY29_RS23755 2a6b4655a8d96d8b54ed1c9b7fca535e 209 Gene3D G3DSA:3.40.50.300 66 209 2.4E-23 T 28-03-2018 APY29_RS23755 2a6b4655a8d96d8b54ed1c9b7fca535e 209 Gene3D G3DSA:3.40.50.300 1 65 9.3E-19 T 28-03-2018 APY29_RS23755 2a6b4655a8d96d8b54ed1c9b7fca535e 209 SUPERFAMILY SSF52540 1 207 1.77E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23755 2a6b4655a8d96d8b54ed1c9b7fca535e 209 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 182 2.3E-20 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain APY29_RS23755 2a6b4655a8d96d8b54ed1c9b7fca535e 209 PIRSF PIRSF009320 1 209 2.6E-66 T 28-03-2018 APY29_RS07905 7368d6b127cfdc9a198723733cd42b57 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 5.2E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS07905 7368d6b127cfdc9a198723733cd42b57 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 5.2E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS07905 7368d6b127cfdc9a198723733cd42b57 206 Gene3D G3DSA:1.10.10.60 2 60 2.4E-20 T 28-03-2018 APY29_RS07905 7368d6b127cfdc9a198723733cd42b57 206 Gene3D G3DSA:1.10.357.10 61 203 6.6E-21 T 28-03-2018 APY29_RS07905 7368d6b127cfdc9a198723733cd42b57 206 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 144 198 1.3E-15 T 28-03-2018 APY29_RS07905 7368d6b127cfdc9a198723733cd42b57 206 SUPERFAMILY SSF46689 1 81 1.12E-21 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS07905 7368d6b127cfdc9a198723733cd42b57 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 1.3E-15 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS05865 fb63b1da42ee7ea0a618bdadf99e3210 385 SUPERFAMILY SSF47384 159 242 2.16E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS05865 fb63b1da42ee7ea0a618bdadf99e3210 385 Gene3D G3DSA:3.30.565.10 244 385 3.3E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS05865 fb63b1da42ee7ea0a618bdadf99e3210 385 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 286 381 2.2E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS05865 fb63b1da42ee7ea0a618bdadf99e3210 385 SMART SM00387 282 385 2.0E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS05865 fb63b1da42ee7ea0a618bdadf99e3210 385 SMART SM00388 176 242 1.9E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS05865 fb63b1da42ee7ea0a618bdadf99e3210 385 Pfam PF00512 His Kinase A (phospho-acceptor) domain 178 242 3.4E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS05865 fb63b1da42ee7ea0a618bdadf99e3210 385 SUPERFAMILY SSF55874 247 383 2.36E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS05865 fb63b1da42ee7ea0a618bdadf99e3210 385 Gene3D G3DSA:1.10.287.130 166 238 1.9E-14 T 28-03-2018 APY29_RS07265 dd2a7718a9f80df40c4320c4ec3f555e 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 28-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site APY29_RS07265 dd2a7718a9f80df40c4320c4ec3f555e 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 5.1E-27 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like APY29_RS07265 dd2a7718a9f80df40c4320c4ec3f555e 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.0E-16 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like APY29_RS07265 dd2a7718a9f80df40c4320c4ec3f555e 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.0E-16 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like APY29_RS07265 dd2a7718a9f80df40c4320c4ec3f555e 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.0E-16 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like APY29_RS07265 dd2a7718a9f80df40c4320c4ec3f555e 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 1.7E-32 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like APY29_RS07265 dd2a7718a9f80df40c4320c4ec3f555e 89 Gene3D G3DSA:3.30.1340.10 1 87 1.2E-29 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like APY29_RS07265 dd2a7718a9f80df40c4320c4ec3f555e 89 SUPERFAMILY SSF55594 1 88 8.11E-27 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like APY29_RS07265 dd2a7718a9f80df40c4320c4ec3f555e 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site APY29_RS00995 0eb8c18fd25552441c31cacfde77a3cf 89 Pfam PF04221 RelB antitoxin 8 76 3.0E-22 T 28-03-2018 IPR007337 RelB antitoxin/Antitoxin DinJ APY29_RS00995 0eb8c18fd25552441c31cacfde77a3cf 89 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 2 85 1.3E-21 T 28-03-2018 IPR007337 RelB antitoxin/Antitoxin DinJ APY29_RS00995 0eb8c18fd25552441c31cacfde77a3cf 89 PIRSF PIRSF003108 1 89 2.9E-29 T 28-03-2018 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 APY29_RS10610 df2c3f277ab4e7ab89b585ac5b3153a1 41 SUPERFAMILY SSF57840 1 40 8.24E-14 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS10610 df2c3f277ab4e7ab89b585ac5b3153a1 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS10610 df2c3f277ab4e7ab89b585ac5b3153a1 41 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 17 40 0.006 T 28-03-2018 APY29_RS10610 df2c3f277ab4e7ab89b585ac5b3153a1 41 Pfam PF00444 Ribosomal protein L36 1 40 2.1E-17 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS10610 df2c3f277ab4e7ab89b585ac5b3153a1 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 40 7.4E-9 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS10610 df2c3f277ab4e7ab89b585ac5b3153a1 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.227 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS09480 7ac32df5bbc83bfc032fb4fb0ea18314 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 185 2.0E-12 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS09480 7ac32df5bbc83bfc032fb4fb0ea18314 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 28-03-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 APY29_RS09480 7ac32df5bbc83bfc032fb4fb0ea18314 634 SMART SM00387 30 187 5.5E-10 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS09480 7ac32df5bbc83bfc032fb4fb0ea18314 634 PRINTS PR00775 90kDa heat shock protein signature 29 51 2.3E-58 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal APY29_RS09480 7ac32df5bbc83bfc032fb4fb0ea18314 634 PRINTS PR00775 90kDa heat shock protein signature 78 95 2.3E-58 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal APY29_RS09480 7ac32df5bbc83bfc032fb4fb0ea18314 634 PRINTS PR00775 90kDa heat shock protein signature 123 145 2.3E-58 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal APY29_RS09480 7ac32df5bbc83bfc032fb4fb0ea18314 634 PRINTS PR00775 90kDa heat shock protein signature 193 211 2.3E-58 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal APY29_RS09480 7ac32df5bbc83bfc032fb4fb0ea18314 634 PRINTS PR00775 90kDa heat shock protein signature 8 28 2.3E-58 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal APY29_RS09480 7ac32df5bbc83bfc032fb4fb0ea18314 634 PRINTS PR00775 90kDa heat shock protein signature 96 113 2.3E-58 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal APY29_RS09480 7ac32df5bbc83bfc032fb4fb0ea18314 634 PRINTS PR00775 90kDa heat shock protein signature 175 192 2.3E-58 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal APY29_RS09480 7ac32df5bbc83bfc032fb4fb0ea18314 634 Pfam PF00183 Hsp90 protein 227 629 1.4E-125 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APY29_RS09480 7ac32df5bbc83bfc032fb4fb0ea18314 634 SUPERFAMILY SSF110942 518 630 5.49E-33 T 28-03-2018 APY29_RS09480 7ac32df5bbc83bfc032fb4fb0ea18314 634 Gene3D G3DSA:3.30.565.10 1 229 1.8E-51 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS09480 7ac32df5bbc83bfc032fb4fb0ea18314 634 SUPERFAMILY SSF55874 8 218 4.32E-64 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS09480 7ac32df5bbc83bfc032fb4fb0ea18314 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 630 31.912 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APY29_RS09480 7ac32df5bbc83bfc032fb4fb0ea18314 634 SUPERFAMILY SSF54211 236 491 6.45E-94 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS09480 7ac32df5bbc83bfc032fb4fb0ea18314 634 PIRSF PIRSF002583 2 634 1.1E-206 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APY29_RS16020 6df8734730b44b9b729a5597e3e7065c 366 SUPERFAMILY SSF51735 141 344 2.5E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS16020 6df8734730b44b9b729a5597e3e7065c 366 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 217 299 1.6E-12 T 28-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 APY29_RS16020 6df8734730b44b9b729a5597e3e7065c 366 SUPERFAMILY SSF53223 3 143 1.15E-46 T 28-03-2018 APY29_RS16020 6df8734730b44b9b729a5597e3e7065c 366 Gene3D G3DSA:3.40.50.10860 1 143 1.7E-49 T 28-03-2018 APY29_RS16020 6df8734730b44b9b729a5597e3e7065c 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 65 79 8.3E-18 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 APY29_RS16020 6df8734730b44b9b729a5597e3e7065c 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 285 296 8.3E-18 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 APY29_RS16020 6df8734730b44b9b729a5597e3e7065c 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 175 195 8.3E-18 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 APY29_RS16020 6df8734730b44b9b729a5597e3e7065c 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 131 153 8.3E-18 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 APY29_RS16020 6df8734730b44b9b729a5597e3e7065c 366 PIRSF PIRSF000188 1 351 6.2E-152 T 28-03-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 APY29_RS16020 6df8734730b44b9b729a5597e3e7065c 366 SMART SM00839 143 350 1.1E-76 T 28-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 APY29_RS16020 6df8734730b44b9b729a5597e3e7065c 366 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 12 127 9.0E-27 T 28-03-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 APY29_RS16020 6df8734730b44b9b729a5597e3e7065c 366 Gene3D G3DSA:3.40.50.720 144 351 3.5E-35 T 28-03-2018 APY29_RS16020 6df8734730b44b9b729a5597e3e7065c 366 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 73 86 - T 28-03-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 APY29_RS10840 565f4ce1e9408a883c252f0ae8fcaf1d 157 Gene3D G3DSA:1.10.10.60 80 138 1.7E-16 T 28-03-2018 APY29_RS10840 565f4ce1e9408a883c252f0ae8fcaf1d 157 SUPERFAMILY SSF46689 26 76 2.51E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS10840 565f4ce1e9408a883c252f0ae8fcaf1d 157 Gene3D G3DSA:1.10.10.60 17 79 3.7E-16 T 28-03-2018 APY29_RS10840 565f4ce1e9408a883c252f0ae8fcaf1d 157 SMART SM00342 42 125 6.8E-28 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS10840 565f4ce1e9408a883c252f0ae8fcaf1d 157 SUPERFAMILY SSF46689 78 128 2.99E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS10840 565f4ce1e9408a883c252f0ae8fcaf1d 157 Pfam PF12833 Helix-turn-helix domain 48 125 6.0E-25 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 SUPERFAMILY SSF52777 11 184 5.89E-33 T 28-03-2018 APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 SMART SM00823 Phosphopantetheine attachment site 960 1029 1.2E-5 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 SUPERFAMILY SSF56801 422 973 9.94E-149 T 28-03-2018 APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 Gene3D G3DSA:1.10.1200.10 966 1037 4.4E-22 T 28-03-2018 APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 SUPERFAMILY SSF47336 953 1025 4.71E-20 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 Gene3D G3DSA:2.30.38.10 757 844 5.1E-22 T 28-03-2018 APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 ProSitePatterns PS00455 Putative AMP-binding domain signature. 600 611 - T 28-03-2018 IPR020845 AMP-binding, conserved site APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 Gene3D G3DSA:3.30.559.10 2 193 1.2E-27 T 28-03-2018 APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 SMART SM00824 Thioesterase 1053 1305 4.2E-6 T 28-03-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 Pfam PF00975 Thioesterase domain 1051 1294 7.7E-29 T 28-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 Gene3D G3DSA:3.40.50.980 455 605 1.4E-35 T 28-03-2018 APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 Pfam PF00550 Phosphopantetheine attachment site 961 1025 1.7E-15 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 Pfam PF00668 Condensation domain 8 444 2.2E-57 T 28-03-2018 IPR001242 Condensation domain APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 Gene3D G3DSA:3.40.50.1820 1042 1305 5.3E-22 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 Gene3D G3DSA:3.30.300.30 847 965 1.4E-38 T 28-03-2018 APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 486 876 2.3E-120 T 28-03-2018 IPR010071 Amino acid adenylation domain APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 Pfam PF13193 AMP-binding enzyme C-terminal domain 860 935 6.4E-12 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 Gene3D G3DSA:3.40.50.980 606 756 6.6E-38 T 28-03-2018 APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 SUPERFAMILY SSF53474 1028 1303 1.46E-51 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 ProSitePatterns PS00012 Phosphopantetheine attachment site. 984 999 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 SUPERFAMILY SSF52777 190 451 1.03E-40 T 28-03-2018 APY29_RS02485 2a99a8b24c1eb3c0d2cbd739d98eb3f0 1332 Pfam PF00501 AMP-binding enzyme 472 852 2.2E-84 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APY29_RS13215 7dc6d12dde984b78aa2c6fe18c622da1 761 Pfam PF13426 PAS domain 58 161 5.8E-17 T 28-03-2018 IPR000014 PAS domain APY29_RS13215 7dc6d12dde984b78aa2c6fe18c622da1 761 Gene3D G3DSA:3.20.20.450 504 761 1.9E-95 T 28-03-2018 IPR001633 EAL domain APY29_RS13215 7dc6d12dde984b78aa2c6fe18c622da1 761 Pfam PF13185 GAF domain 180 322 2.9E-10 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS13215 7dc6d12dde984b78aa2c6fe18c622da1 761 Gene3D G3DSA:3.30.70.270 350 503 2.9E-55 T 28-03-2018 APY29_RS13215 7dc6d12dde984b78aa2c6fe18c622da1 761 SMART SM00086 120 162 8.6E-6 T 28-03-2018 IPR001610 PAC motif APY29_RS13215 7dc6d12dde984b78aa2c6fe18c622da1 761 SMART SM00065 164 332 4.7E-5 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS13215 7dc6d12dde984b78aa2c6fe18c622da1 761 SMART SM00052 505 752 3.3E-108 T 28-03-2018 IPR001633 EAL domain APY29_RS13215 7dc6d12dde984b78aa2c6fe18c622da1 761 PIRSF PIRSF005925 36 761 0.0 T 28-03-2018 IPR012226 Diguanylate cyclase/phosphodiesterase APY29_RS13215 7dc6d12dde984b78aa2c6fe18c622da1 761 SUPERFAMILY SSF55073 340 497 2.2E-46 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS13215 7dc6d12dde984b78aa2c6fe18c622da1 761 Gene3D G3DSA:3.30.450.40 169 349 3.3E-21 T 28-03-2018 IPR029016 GAF domain-like APY29_RS13215 7dc6d12dde984b78aa2c6fe18c622da1 761 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 45 166 9.7E-19 T 28-03-2018 IPR000014 PAS domain APY29_RS13215 7dc6d12dde984b78aa2c6fe18c622da1 761 SUPERFAMILY SSF55785 53 160 9.67E-22 T 28-03-2018 IPR000014 PAS domain APY29_RS13215 7dc6d12dde984b78aa2c6fe18c622da1 761 SUPERFAMILY SSF141868 511 758 2.75E-83 T 28-03-2018 IPR001633 EAL domain APY29_RS13215 7dc6d12dde984b78aa2c6fe18c622da1 761 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 333 492 1.4E-35 T 28-03-2018 IPR000160 GGDEF domain APY29_RS13215 7dc6d12dde984b78aa2c6fe18c622da1 761 SUPERFAMILY SSF55781 184 335 6.98E-22 T 28-03-2018 IPR029016 GAF domain-like APY29_RS13215 7dc6d12dde984b78aa2c6fe18c622da1 761 SMART SM00091 47 114 6.6E-7 T 28-03-2018 IPR000014 PAS domain APY29_RS13215 7dc6d12dde984b78aa2c6fe18c622da1 761 Pfam PF00990 Diguanylate cyclase, GGDEF domain 335 490 4.2E-42 T 28-03-2018 IPR000160 GGDEF domain APY29_RS13215 7dc6d12dde984b78aa2c6fe18c622da1 761 Pfam PF00563 EAL domain 511 747 7.1E-73 T 28-03-2018 IPR001633 EAL domain APY29_RS13215 7dc6d12dde984b78aa2c6fe18c622da1 761 Gene3D G3DSA:3.30.450.20 33 168 6.4E-26 T 28-03-2018 APY29_RS13215 7dc6d12dde984b78aa2c6fe18c622da1 761 SMART SM00267 324 495 2.2E-57 T 28-03-2018 IPR000160 GGDEF domain APY29_RS13300 21fcf41a3f97447f933c37eb047c94f6 205 Gene3D G3DSA:1.25.10.10 16 197 2.6E-7 T 28-03-2018 IPR011989 Armadillo-like helical APY29_RS13300 21fcf41a3f97447f933c37eb047c94f6 205 SUPERFAMILY SSF48371 57 182 2.78E-7 T 28-03-2018 IPR016024 Armadillo-type fold GO:0005488 APY29_RS15815 57641e9e9ac8577a4e1dd9d1220cc5a3 297 SUPERFAMILY SSF52540 7 219 7.07E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS15815 57641e9e9ac8577a4e1dd9d1220cc5a3 297 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS15815 57641e9e9ac8577a4e1dd9d1220cc5a3 297 SMART SM00382 26 216 6.3E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS15815 57641e9e9ac8577a4e1dd9d1220cc5a3 297 Gene3D G3DSA:3.40.50.300 1 246 2.2E-58 T 28-03-2018 APY29_RS15815 57641e9e9ac8577a4e1dd9d1220cc5a3 297 Pfam PF00005 ABC transporter 18 167 3.7E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS18030 cb9ee8c4350acecbc8a271c4f6c5fc72 111 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 28-03-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18030 cb9ee8c4350acecbc8a271c4f6c5fc72 111 SUPERFAMILY SSF54843 1 108 2.88E-41 T 28-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APY29_RS18030 cb9ee8c4350acecbc8a271c4f6c5fc72 111 Pfam PF00237 Ribosomal protein L22p/L17e 6 107 1.2E-35 T 28-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APY29_RS18030 cb9ee8c4350acecbc8a271c4f6c5fc72 111 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.5E-45 T 28-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS18030 cb9ee8c4350acecbc8a271c4f6c5fc72 111 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.371 T 28-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS18030 cb9ee8c4350acecbc8a271c4f6c5fc72 111 Gene3D G3DSA:3.90.470.10 1 111 4.1E-40 T 28-03-2018 APY29_RS19750 c92f3885b6d611ace296a60e2bd7c554 204 Gene3D G3DSA:3.40.50.1000 10 188 1.8E-30 T 28-03-2018 IPR023214 HAD-like domain APY29_RS19750 c92f3885b6d611ace296a60e2bd7c554 204 Pfam PF00702 haloacid dehalogenase-like hydrolase 64 171 2.8E-15 T 28-03-2018 APY29_RS19750 c92f3885b6d611ace296a60e2bd7c554 204 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 17 171 4.9E-9 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS19750 c92f3885b6d611ace296a60e2bd7c554 204 SUPERFAMILY SSF56784 11 200 3.66E-36 T 28-03-2018 IPR023214 HAD-like domain APY29_RS19750 c92f3885b6d611ace296a60e2bd7c554 204 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 15 177 5.7E-9 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS02930 9e93f5b91056f307fd9fb2e0b762ab3e 228 Pfam PF00005 ABC transporter 20 167 7.1E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS02930 9e93f5b91056f307fd9fb2e0b762ab3e 228 SUPERFAMILY SSF52540 3 225 4.98E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS02930 9e93f5b91056f307fd9fb2e0b762ab3e 228 SMART SM00382 29 216 1.3E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS02930 9e93f5b91056f307fd9fb2e0b762ab3e 228 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS02930 9e93f5b91056f307fd9fb2e0b762ab3e 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 4 216 7.0E-84 T 28-03-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 APY29_RS02930 9e93f5b91056f307fd9fb2e0b762ab3e 228 Gene3D G3DSA:3.40.50.300 1 228 2.4E-62 T 28-03-2018 APY29_RS10100 ab32de30d98f7962dcade0e61f8586f6 689 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 267 427 4.0E-16 T 28-03-2018 IPR000160 GGDEF domain APY29_RS10100 ab32de30d98f7962dcade0e61f8586f6 689 Gene3D G3DSA:3.30.450.20 132 255 1.9E-11 T 28-03-2018 APY29_RS10100 ab32de30d98f7962dcade0e61f8586f6 689 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 248 3.5E-7 T 28-03-2018 IPR000014 PAS domain APY29_RS10100 ab32de30d98f7962dcade0e61f8586f6 689 SUPERFAMILY SSF141868 447 680 1.83E-47 T 28-03-2018 IPR001633 EAL domain APY29_RS10100 ab32de30d98f7962dcade0e61f8586f6 689 Gene3D G3DSA:3.40.50.2300 3 131 2.2E-4 T 28-03-2018 APY29_RS10100 ab32de30d98f7962dcade0e61f8586f6 689 SUPERFAMILY SSF55785 132 251 3.24E-12 T 28-03-2018 IPR000014 PAS domain APY29_RS10100 ab32de30d98f7962dcade0e61f8586f6 689 Gene3D G3DSA:3.20.20.450 430 689 1.5E-57 T 28-03-2018 IPR001633 EAL domain APY29_RS10100 ab32de30d98f7962dcade0e61f8586f6 689 Pfam PF13188 PAS domain 148 200 4.5E-4 T 28-03-2018 IPR000014 PAS domain APY29_RS10100 ab32de30d98f7962dcade0e61f8586f6 689 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 418 4.2E-17 T 28-03-2018 IPR000160 GGDEF domain APY29_RS10100 ab32de30d98f7962dcade0e61f8586f6 689 SMART SM00267 258 429 7.0E-8 T 28-03-2018 IPR000160 GGDEF domain APY29_RS10100 ab32de30d98f7962dcade0e61f8586f6 689 SMART SM00052 441 685 1.4E-26 T 28-03-2018 IPR001633 EAL domain APY29_RS10100 ab32de30d98f7962dcade0e61f8586f6 689 Pfam PF00563 EAL domain 447 679 4.3E-52 T 28-03-2018 IPR001633 EAL domain APY29_RS10100 ab32de30d98f7962dcade0e61f8586f6 689 SUPERFAMILY SSF55073 275 431 5.26E-22 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS10100 ab32de30d98f7962dcade0e61f8586f6 689 Gene3D G3DSA:3.30.70.270 259 429 4.1E-28 T 28-03-2018 APY29_RS10100 ab32de30d98f7962dcade0e61f8586f6 689 SUPERFAMILY SSF52172 9 154 8.89E-6 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS05785 7c4f52b2a9ff5773ac42b5887e8e84ce 313 Pfam PF01734 Patatin-like phospholipase 10 291 1.5E-21 T 28-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 APY29_RS05785 7c4f52b2a9ff5773ac42b5887e8e84ce 313 Gene3D G3DSA:3.40.1090.10 2 303 4.1E-38 T 28-03-2018 APY29_RS05785 7c4f52b2a9ff5773ac42b5887e8e84ce 313 SUPERFAMILY SSF52151 5 73 5.49E-37 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APY29_RS05785 7c4f52b2a9ff5773ac42b5887e8e84ce 313 SUPERFAMILY SSF52151 175 294 5.49E-37 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APY29_RS11760 2af8e2c45727fa42e18c7ee8bb5ec7a6 172 Pfam PF01609 Transposase DDE domain 9 156 3.6E-26 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 Gene3D G3DSA:3.30.1370.10 561 616 2.1E-15 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 Pfam PF03725 3' exoribonuclease family, domain 2 460 529 8.9E-7 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 Pfam PF03725 3' exoribonuclease family, domain 2 146 209 9.2E-11 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 Gene3D G3DSA:3.30.230.70 310 560 2.8E-58 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 SUPERFAMILY SSF46915 225 327 3.27E-18 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 PIRSF PIRSF005499 1 704 1.5E-294 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 SUPERFAMILY SSF54211 4 143 2.48E-48 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 SUPERFAMILY SSF50249 609 695 2.91E-22 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 320 2.8E-12 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 SMART SM00322 553 618 3.8E-12 T 28-03-2018 IPR004087 K Homology domain GO:0003676 APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 Pfam PF00575 S1 RNA binding domain 620 691 1.5E-20 T 28-03-2018 IPR003029 S1 domain GO:0003676 APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 SUPERFAMILY SSF55666 451 550 9.96E-29 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 Gene3D G3DSA:2.40.50.140 617 697 2.8E-25 T 28-03-2018 APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 SUPERFAMILY SSF54211 305 493 2.58E-47 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 693 0.0 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 SMART SM00316 621 691 4.9E-26 T 28-03-2018 IPR022967 RNA-binding domain, S1 APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 694 30.429 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 Gene3D G3DSA:1.10.10.400 252 309 3.4E-15 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 5.2E-18 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 2.9E-21 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 SUPERFAMILY SSF54791 553 630 2.43E-17 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 Gene3D G3DSA:3.30.230.70 13 251 1.1E-49 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 Pfam PF00013 KH domain 558 614 8.2E-10 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 APY29_RS08845 5ce878014fb2e9f5deb5d8480651a3b6 704 SUPERFAMILY SSF55666 144 234 1.23E-27 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 APY29_RS05605 ca4d10172944b4778b84fb89e9006274 675 SUPERFAMILY SSF56935 27 675 2.53E-94 T 28-03-2018 APY29_RS05605 ca4d10172944b4778b84fb89e9006274 675 Pfam PF00593 TonB dependent receptor 237 673 1.2E-37 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS05605 ca4d10172944b4778b84fb89e9006274 675 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 158 6.1E-18 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS05605 ca4d10172944b4778b84fb89e9006274 675 Gene3D G3DSA:2.170.130.10 25 170 2.3E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS05605 ca4d10172944b4778b84fb89e9006274 675 Gene3D G3DSA:2.40.170.20 171 675 4.7E-55 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS13265 e2b0a7976b4826c3498325b6bb4430a7 378 Gene3D G3DSA:1.10.3210.10 186 369 8.2E-47 T 28-03-2018 APY29_RS13265 e2b0a7976b4826c3498325b6bb4430a7 378 SMART SM00448 28 143 5.2E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS13265 e2b0a7976b4826c3498325b6bb4430a7 378 SUPERFAMILY SSF109604 170 356 3.66E-41 T 28-03-2018 APY29_RS13265 e2b0a7976b4826c3498325b6bb4430a7 378 Pfam PF00072 Response regulator receiver domain 30 142 8.4E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS13265 e2b0a7976b4826c3498325b6bb4430a7 378 SMART SM00471 192 329 2.4E-6 T 28-03-2018 IPR003607 HD/PDEase domain APY29_RS13265 e2b0a7976b4826c3498325b6bb4430a7 378 Gene3D G3DSA:3.40.50.2300 19 185 6.7E-37 T 28-03-2018 APY29_RS13265 e2b0a7976b4826c3498325b6bb4430a7 378 SUPERFAMILY SSF52172 28 176 4.41E-36 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS13265 e2b0a7976b4826c3498325b6bb4430a7 378 Pfam PF01966 HD domain 202 319 5.7E-19 T 28-03-2018 IPR006674 HD domain APY29_RS18620 dff1888a5630f6b3cc1781bb8385885c 127 Hamap MF_00791 Protein ApaG [apaG]. 2 127 33.287 T 28-03-2018 IPR023065 Uncharacterised protein family ApaG APY29_RS18620 dff1888a5630f6b3cc1781bb8385885c 127 Gene3D G3DSA:2.60.40.1470 2 127 5.1E-43 T 28-03-2018 IPR007474 ApaG domain APY29_RS18620 dff1888a5630f6b3cc1781bb8385885c 127 Pfam PF04379 ApaG domain 20 104 1.7E-34 T 28-03-2018 IPR007474 ApaG domain APY29_RS18620 dff1888a5630f6b3cc1781bb8385885c 127 SUPERFAMILY SSF110069 8 127 3.4E-46 T 28-03-2018 IPR007474 ApaG domain APY29_RS13275 19e89acebbc463dae9006ec65c7a7c0a 351 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 340 1.1E-152 T 28-03-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 APY29_RS13275 19e89acebbc463dae9006ec65c7a7c0a 351 SMART SM00937 62 172 1.1E-55 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 APY29_RS13275 19e89acebbc463dae9006ec65c7a7c0a 351 Gene3D G3DSA:3.30.160.20 203 285 3.3E-35 T 28-03-2018 APY29_RS13275 19e89acebbc463dae9006ec65c7a7c0a 351 SUPERFAMILY SSF75620 9 340 5.36E-129 T 28-03-2018 APY29_RS13275 19e89acebbc463dae9006ec65c7a7c0a 351 Gene3D G3DSA:1.20.58.410 1 100 2.6E-19 T 28-03-2018 APY29_RS13275 19e89acebbc463dae9006ec65c7a7c0a 351 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 222 238 - T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APY29_RS13275 19e89acebbc463dae9006ec65c7a7c0a 351 Pfam PF03462 PCRF domain 8 197 3.0E-56 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 APY29_RS13275 19e89acebbc463dae9006ec65c7a7c0a 351 Pfam PF00472 RF-1 domain 205 314 6.9E-41 T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APY29_RS13275 19e89acebbc463dae9006ec65c7a7c0a 351 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 342 38.131 T 28-03-2018 IPR020853 Peptide chain release factor 2, bacterial GO:0005737|GO:0006415|GO:0016149 APY29_RS11725 7cbb391f10349f2a9a8ecc1db8f86301 266 PIRSF PIRSF003073 1 256 6.0E-81 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein APY29_RS11725 7cbb391f10349f2a9a8ecc1db8f86301 266 SUPERFAMILY SSF52540 86 241 6.46E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11725 7cbb391f10349f2a9a8ecc1db8f86301 266 Pfam PF01695 IstB-like ATP binding protein 56 234 1.8E-60 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 APY29_RS11725 7cbb391f10349f2a9a8ecc1db8f86301 266 SMART SM00382 100 237 7.2E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS11725 7cbb391f10349f2a9a8ecc1db8f86301 266 Gene3D G3DSA:3.40.50.300 46 236 3.9E-17 T 28-03-2018 APY29_RS12220 7cbb391f10349f2a9a8ecc1db8f86301 266 PIRSF PIRSF003073 1 256 6.0E-81 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein APY29_RS12220 7cbb391f10349f2a9a8ecc1db8f86301 266 SUPERFAMILY SSF52540 86 241 6.46E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS12220 7cbb391f10349f2a9a8ecc1db8f86301 266 Pfam PF01695 IstB-like ATP binding protein 56 234 1.8E-60 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 APY29_RS12220 7cbb391f10349f2a9a8ecc1db8f86301 266 SMART SM00382 100 237 7.2E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS12220 7cbb391f10349f2a9a8ecc1db8f86301 266 Gene3D G3DSA:3.40.50.300 46 236 3.9E-17 T 28-03-2018 APY29_RS12630 4a75546524f79c3604f78e419b900042 697 SUPERFAMILY SSF55785 337 460 1.54E-16 T 28-03-2018 IPR000014 PAS domain APY29_RS12630 4a75546524f79c3604f78e419b900042 697 Pfam PF13426 PAS domain 362 462 3.1E-7 T 28-03-2018 IPR000014 PAS domain APY29_RS12630 4a75546524f79c3604f78e419b900042 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 670 683 6.5E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS12630 4a75546524f79c3604f78e419b900042 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 645 6.5E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS12630 4a75546524f79c3604f78e419b900042 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 646 664 6.5E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS12630 4a75546524f79c3604f78e419b900042 697 Gene3D G3DSA:3.30.450.20 86 217 5.9E-21 T 28-03-2018 APY29_RS12630 4a75546524f79c3604f78e419b900042 697 Gene3D G3DSA:3.30.450.20 342 491 3.1E-19 T 28-03-2018 APY29_RS12630 4a75546524f79c3604f78e419b900042 697 Pfam PF07730 Histidine kinase 491 556 1.6E-12 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 APY29_RS12630 4a75546524f79c3604f78e419b900042 697 SUPERFAMILY SSF55874 561 683 1.31E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS12630 4a75546524f79c3604f78e419b900042 697 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 94 205 1.5E-8 T 28-03-2018 IPR000014 PAS domain APY29_RS12630 4a75546524f79c3604f78e419b900042 697 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 348 470 1.8E-13 T 28-03-2018 IPR000014 PAS domain APY29_RS12630 4a75546524f79c3604f78e419b900042 697 SUPERFAMILY SSF55785 209 338 3.14E-8 T 28-03-2018 IPR000014 PAS domain APY29_RS12630 4a75546524f79c3604f78e419b900042 697 SUPERFAMILY SSF55785 90 204 1.95E-15 T 28-03-2018 IPR000014 PAS domain APY29_RS12630 4a75546524f79c3604f78e419b900042 697 Pfam PF08448 PAS fold 107 211 1.4E-8 T 28-03-2018 IPR013656 PAS fold-4 APY29_RS12630 4a75546524f79c3604f78e419b900042 697 Gene3D G3DSA:3.30.450.20 218 341 7.7E-12 T 28-03-2018 APY29_RS12630 4a75546524f79c3604f78e419b900042 697 SMART SM00387 594 686 4.2E-12 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS12630 4a75546524f79c3604f78e419b900042 697 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 597 684 9.8E-9 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS12630 4a75546524f79c3604f78e419b900042 697 Gene3D G3DSA:3.30.565.10 513 685 5.2E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS12630 4a75546524f79c3604f78e419b900042 697 SMART SM00091 93 164 7.9E-8 T 28-03-2018 IPR000014 PAS domain APY29_RS12630 4a75546524f79c3604f78e419b900042 697 SMART SM00091 222 288 190.0 T 28-03-2018 IPR000014 PAS domain APY29_RS12630 4a75546524f79c3604f78e419b900042 697 SMART SM00091 352 417 2.2E-5 T 28-03-2018 IPR000014 PAS domain APY29_RS07705 7c15aaa82c5fbbe059a74d291c499c66 225 Gene3D G3DSA:3.40.50.1000 74 224 1.5E-23 T 28-03-2018 IPR023214 HAD-like domain APY29_RS07705 7c15aaa82c5fbbe059a74d291c499c66 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 145 165 5.5E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS07705 7c15aaa82c5fbbe059a74d291c499c66 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 5.5E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS07705 7c15aaa82c5fbbe059a74d291c499c66 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 95 108 5.5E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS07705 7c15aaa82c5fbbe059a74d291c499c66 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 127 143 5.5E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS07705 7c15aaa82c5fbbe059a74d291c499c66 225 Gene3D G3DSA:1.10.150.240 18 73 1.6E-6 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 APY29_RS07705 7c15aaa82c5fbbe059a74d291c499c66 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 182 6.6E-24 T 28-03-2018 IPR023214 HAD-like domain APY29_RS07705 7c15aaa82c5fbbe059a74d291c499c66 225 SUPERFAMILY SSF56784 3 216 4.21E-48 T 28-03-2018 IPR023214 HAD-like domain APY29_RS07705 7c15aaa82c5fbbe059a74d291c499c66 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 53 182 1.5E-17 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS18505 ed36c61ff9e901e6229b83e6e6d549ca 157 Pfam PF12802 MarR family 34 91 1.0E-8 T 28-03-2018 APY29_RS18505 ed36c61ff9e901e6229b83e6e6d549ca 157 SUPERFAMILY SSF46785 5 140 5.88E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS18505 ed36c61ff9e901e6229b83e6e6d549ca 157 Gene3D G3DSA:1.10.10.10 2 142 1.5E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS18505 ed36c61ff9e901e6229b83e6e6d549ca 157 SMART SM00347 28 127 5.7E-9 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS02895 27ba0eb080742b8dddf8264eed2011a3 743 SUPERFAMILY SSF53659 4 741 0.0 T 28-03-2018 APY29_RS02895 27ba0eb080742b8dddf8264eed2011a3 743 PIRSF PIRSF009407 1 742 0.0 T 28-03-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 APY29_RS02895 27ba0eb080742b8dddf8264eed2011a3 743 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 3 742 0.0 T 28-03-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 APY29_RS02895 27ba0eb080742b8dddf8264eed2011a3 743 Gene3D G3DSA:3.40.718.10 64 370 2.1E-44 T 28-03-2018 APY29_RS02895 27ba0eb080742b8dddf8264eed2011a3 743 Pfam PF03971 Monomeric isocitrate dehydrogenase 6 738 0.0 T 28-03-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 APY29_RS02895 27ba0eb080742b8dddf8264eed2011a3 743 Gene3D G3DSA:3.40.718.10 436 709 1.8E-43 T 28-03-2018 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 ProSitePatterns PS00177 DNA topoisomerase II signature. 432 440 - T 28-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 42 182 4.3E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 SUPERFAMILY SSF55874 15 220 2.6E-69 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 Gene3D G3DSA:3.30.565.10 27 230 9.0E-69 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 12 814 97.677 T 28-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 Gene3D G3DSA:3.40.50.670 410 811 2.3E-103 T 28-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 PRINTS PR00418 DNA topoisomerase II family signature 515 532 3.2E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 PRINTS PR00418 DNA topoisomerase II family signature 535 547 3.2E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 PRINTS PR00418 DNA topoisomerase II family signature 430 444 3.2E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 PRINTS PR00418 DNA topoisomerase II family signature 80 93 3.2E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 PRINTS PR00418 DNA topoisomerase II family signature 123 137 3.2E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 PRINTS PR00418 DNA topoisomerase II family signature 278 291 3.2E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 PRINTS PR00418 DNA topoisomerase II family signature 45 60 3.2E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 PRINTS PR00418 DNA topoisomerase II family signature 746 762 3.2E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 PRINTS PR00418 DNA topoisomerase II family signature 497 513 3.2E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 Pfam PF00204 DNA gyrase B 231 400 1.0E-57 T 28-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 Pfam PF01751 Toprim domain 429 534 3.0E-17 T 28-03-2018 IPR006171 TOPRIM domain APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 SMART SM00433 45 807 1.2E-254 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 SMART SM00387 41 185 3.0E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 742 803 2.0E-29 T 28-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 Gene3D G3DSA:3.30.230.10 231 402 7.0E-63 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 15 814 2.6E-296 T 28-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 SUPERFAMILY SSF56719 740 805 4.97E-83 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 SUPERFAMILY SSF56719 404 570 4.97E-83 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 PRINTS PR01159 DNA gyrase subunit B signature 230 252 1.7E-73 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 PRINTS PR01159 DNA gyrase subunit B signature 370 384 1.7E-73 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 PRINTS PR01159 DNA gyrase subunit B signature 205 218 1.7E-73 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 PRINTS PR01159 DNA gyrase subunit B signature 480 489 1.7E-73 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 PRINTS PR01159 DNA gyrase subunit B signature 767 779 1.7E-73 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 PRINTS PR01159 DNA gyrase subunit B signature 384 404 1.7E-73 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 PRINTS PR01159 DNA gyrase subunit B signature 190 205 1.7E-73 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 PRINTS PR01159 DNA gyrase subunit B signature 15 25 1.7E-73 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 PRINTS PR01159 DNA gyrase subunit B signature 783 799 1.7E-73 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 PRINTS PR01159 DNA gyrase subunit B signature 322 338 1.7E-73 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APY29_RS00020 cf1c8e4fb4efd71bf84cadc615af2ba3 814 SUPERFAMILY SSF54211 231 401 2.28E-56 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS19080 90ccdc81faae395a748568394a272420 342 Gene3D G3DSA:1.10.150.170 111 207 8.5E-37 T 28-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APY29_RS19080 90ccdc81faae395a748568394a272420 342 Pfam PF01795 MraW methylase family 7 305 1.1E-99 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APY29_RS19080 90ccdc81faae395a748568394a272420 342 PIRSF PIRSF004486 2 307 8.1E-98 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APY29_RS19080 90ccdc81faae395a748568394a272420 342 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 8 306 37.292 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APY29_RS19080 90ccdc81faae395a748568394a272420 342 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 6 305 3.0E-99 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APY29_RS19080 90ccdc81faae395a748568394a272420 342 SUPERFAMILY SSF81799 113 212 3.66E-34 T 28-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APY29_RS19080 90ccdc81faae395a748568394a272420 342 SUPERFAMILY SSF53335 212 306 5.8E-43 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS19080 90ccdc81faae395a748568394a272420 342 SUPERFAMILY SSF53335 8 112 5.8E-43 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS19080 90ccdc81faae395a748568394a272420 342 Gene3D G3DSA:3.40.50.150 208 312 0.019 T 28-03-2018 APY29_RS06165 b1ad741a0cc5d3804a0ad76b921b6ddf 589 Pfam PF04183 IucA / IucC family 150 379 7.2E-42 T 28-03-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 APY29_RS06165 b1ad741a0cc5d3804a0ad76b921b6ddf 589 Pfam PF06276 Ferric iron reductase FhuF-like transporter 409 568 5.8E-35 T 28-03-2018 IPR022770 Ferric iron reductase FhuF domain APY29_RS15600 b481be38cf8f2cee6cda5ccd3f2ad52c 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 113 2.2E-28 T 28-03-2018 IPR006504 Transcriptional regulator Spx/MgsR APY29_RS15600 b481be38cf8f2cee6cda5ccd3f2ad52c 118 SUPERFAMILY SSF52833 1 115 1.89E-29 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS15600 b481be38cf8f2cee6cda5ccd3f2ad52c 118 Pfam PF03960 ArsC family 6 113 5.1E-14 T 28-03-2018 IPR006660 Arsenate reductase-like APY29_RS15600 b481be38cf8f2cee6cda5ccd3f2ad52c 118 Gene3D G3DSA:3.40.30.10 1 116 2.9E-31 T 28-03-2018 APY29_RS09985 ceb22951b44b2afcccb2b1e64df21940 363 Pfam PF00589 Phage integrase family 202 354 1.5E-23 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS09985 ceb22951b44b2afcccb2b1e64df21940 363 Gene3D G3DSA:1.10.443.10 177 363 6.1E-34 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS09985 ceb22951b44b2afcccb2b1e64df21940 363 SUPERFAMILY SSF56349 60 360 9.08E-47 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APY29_RS09985 ceb22951b44b2afcccb2b1e64df21940 363 Gene3D G3DSA:1.10.150.130 53 173 6.3E-11 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal APY29_RS17475 8f0c1665377995ecd1da496602658ca3 106 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 3 95 21.813 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family APY29_RS17475 8f0c1665377995ecd1da496602658ca3 106 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 102 6.3E-32 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family APY29_RS17475 8f0c1665377995ecd1da496602658ca3 106 SUPERFAMILY SSF82607 9 100 3.27E-31 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family APY29_RS17475 8f0c1665377995ecd1da496602658ca3 106 PIRSF PIRSF004555 1 106 2.6E-35 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family APY29_RS17475 8f0c1665377995ecd1da496602658ca3 106 Gene3D G3DSA:3.30.1310.10 1 106 1.4E-40 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family APY29_RS17475 8f0c1665377995ecd1da496602658ca3 106 Pfam PF02575 YbaB/EbfC DNA-binding family 9 96 4.2E-32 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family APY29_RS06825 320af794d6722a27e0c0e59bce228bbd 453 Gene3D G3DSA:1.20.1250.20 243 449 0.0016 T 28-03-2018 APY29_RS06825 320af794d6722a27e0c0e59bce228bbd 453 Pfam PF07690 Major Facilitator Superfamily 77 351 2.7E-13 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS06825 320af794d6722a27e0c0e59bce228bbd 453 SUPERFAMILY SSF103473 63 442 3.58E-23 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS06825 320af794d6722a27e0c0e59bce228bbd 453 Gene3D G3DSA:1.20.1250.20 13 232 2.3E-16 T 28-03-2018 APY29_RS22520 03584f48f49a39f9c9f11e9e4c0e2587 250 Pfam PF00117 Glutamine amidotransferase class-I 54 193 1.7E-20 T 28-03-2018 IPR017926 Glutamine amidotransferase APY29_RS22520 03584f48f49a39f9c9f11e9e4c0e2587 250 SUPERFAMILY SSF52317 38 205 2.92E-39 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS22520 03584f48f49a39f9c9f11e9e4c0e2587 250 Gene3D G3DSA:3.40.50.880 18 248 4.8E-37 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Pfam PF13184 NusA-like KH domain 234 301 1.4E-27 T 28-03-2018 IPR025249 KH domain, NusA-like GO:0003723 APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Gene3D G3DSA:3.30.300.20 282 352 1.5E-13 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 SUPERFAMILY SSF69705 1 130 2.09E-37 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 414 29.494 T 28-03-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 3.4E-126 T 28-03-2018 IPR010213 Transcription termination factor NusA GO:0003723 APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 369 418 2.2E-22 T 28-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 444 494 3.0E-18 T 28-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 SUPERFAMILY SSF54814 283 346 8.5E-15 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Pfam PF08529 NusA N-terminal domain 4 128 1.1E-35 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 SUPERFAMILY SSF54814 205 282 3.92E-29 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 SUPERFAMILY SSF47794 433 493 1.73E-9 T 28-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Pfam PF00575 S1 RNA binding domain 135 199 1.6E-7 T 28-03-2018 IPR003029 S1 domain GO:0003676 APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Pfam PF14520 Helix-hairpin-helix domain 436 492 2.4E-7 T 28-03-2018 APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 SUPERFAMILY SSF47794 360 419 6.44E-16 T 28-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 SMART SM00322 305 368 0.013 T 28-03-2018 IPR004087 K Homology domain GO:0003676 APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 SMART SM00322 234 297 21.0 T 28-03-2018 IPR004087 K Homology domain GO:0003676 APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Gene3D G3DSA:1.10.150.20 353 432 2.3E-13 T 28-03-2018 APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Gene3D G3DSA:3.30.300.20 203 280 1.1E-31 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 SUPERFAMILY SSF50249 135 203 7.8E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Gene3D G3DSA:1.10.150.20 433 495 2.9E-12 T 28-03-2018 APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Gene3D G3DSA:2.40.50.140 133 202 4.4E-15 T 28-03-2018 APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 SMART SM00316 137 204 5.5E-8 T 28-03-2018 IPR022967 RNA-binding domain, S1 APY29_RS08820 89be7c6f7b6f558cad7a9c3fcbc79f3f 503 Gene3D G3DSA:3.30.1480.10 1 132 9.6E-44 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APY29_RS22610 df49d39308621c2909b5d9b60f67a1b0 419 Pfam PF13378 Enolase C-terminal domain-like 211 394 3.4E-38 T 28-03-2018 IPR029065 Enolase C-terminal domain-like APY29_RS22610 df49d39308621c2909b5d9b60f67a1b0 419 SUPERFAMILY SSF54826 26 129 5.38E-31 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS22610 df49d39308621c2909b5d9b60f67a1b0 419 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 102 127 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 APY29_RS22610 df49d39308621c2909b5d9b60f67a1b0 419 Gene3D G3DSA:3.20.20.120 118 392 1.5E-56 T 28-03-2018 IPR029065 Enolase C-terminal domain-like APY29_RS22610 df49d39308621c2909b5d9b60f67a1b0 419 Gene3D G3DSA:3.30.390.10 10 117 2.7E-29 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS22610 df49d39308621c2909b5d9b60f67a1b0 419 SMART SM00922 145 274 3.5E-13 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APY29_RS22610 df49d39308621c2909b5d9b60f67a1b0 419 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 30 127 2.3E-31 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APY29_RS22610 df49d39308621c2909b5d9b60f67a1b0 419 SUPERFAMILY SSF51604 115 401 2.36E-70 T 28-03-2018 IPR029065 Enolase C-terminal domain-like APY29_RS01405 a31e2bbde138bbd6f710afbd3736428b 926 Pfam PF07724 AAA domain (Cdc48 subfamily) 646 812 5.9E-39 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APY29_RS01405 a31e2bbde138bbd6f710afbd3736428b 926 Gene3D G3DSA:1.10.1780.10 1 161 1.7E-17 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 APY29_RS01405 a31e2bbde138bbd6f710afbd3736428b 926 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 236 347 2.4E-8 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APY29_RS01405 a31e2bbde138bbd6f710afbd3736428b 926 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 819 891 3.7E-12 T 28-03-2018 IPR019489 Clp ATPase, C-terminal APY29_RS01405 a31e2bbde138bbd6f710afbd3736428b 926 SUPERFAMILY SSF52540 596 893 8.26E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS01405 a31e2bbde138bbd6f710afbd3736428b 926 SUPERFAMILY SSF52540 192 521 1.43E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS01405 a31e2bbde138bbd6f710afbd3736428b 926 SUPERFAMILY SSF81923 12 130 9.02E-16 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 APY29_RS01405 a31e2bbde138bbd6f710afbd3736428b 926 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 327 339 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 APY29_RS01405 a31e2bbde138bbd6f710afbd3736428b 926 Gene3D G3DSA:1.10.8.60 377 597 8.1E-38 T 28-03-2018 APY29_RS01405 a31e2bbde138bbd6f710afbd3736428b 926 Gene3D G3DSA:3.40.50.300 190 375 5.9E-23 T 28-03-2018 APY29_RS01405 a31e2bbde138bbd6f710afbd3736428b 926 Gene3D G3DSA:1.10.8.60 833 925 3.6E-11 T 28-03-2018 APY29_RS01405 a31e2bbde138bbd6f710afbd3736428b 926 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 725 743 1.5E-30 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 APY29_RS01405 a31e2bbde138bbd6f710afbd3736428b 926 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 696 714 1.5E-30 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 APY29_RS01405 a31e2bbde138bbd6f710afbd3736428b 926 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 758 772 1.5E-30 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 APY29_RS01405 a31e2bbde138bbd6f710afbd3736428b 926 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 651 669 1.5E-30 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 APY29_RS01405 a31e2bbde138bbd6f710afbd3736428b 926 Gene3D G3DSA:3.40.50.300 599 832 9.7E-35 T 28-03-2018 APY29_RS01405 a31e2bbde138bbd6f710afbd3736428b 926 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 902 0.0 T 28-03-2018 IPR017729 Type VI secretion system, ATPase ClpV1 APY29_RS01405 a31e2bbde138bbd6f710afbd3736428b 926 SMART SM01086 819 911 2.2E-10 T 28-03-2018 IPR019489 Clp ATPase, C-terminal APY29_RS01405 a31e2bbde138bbd6f710afbd3736428b 926 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 681 699 - T 28-03-2018 IPR028299 ClpA/B, conserved site 2 APY29_RS01405 a31e2bbde138bbd6f710afbd3736428b 926 SMART SM00382 647 790 2.1E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS01405 a31e2bbde138bbd6f710afbd3736428b 926 SMART SM00382 231 376 4.0E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS15870 3cdafbf538a88f60e75f19e4e7fafc23 416 Gene3D G3DSA:3.90.660.20 46 332 1.7E-31 T 28-03-2018 APY29_RS15870 3cdafbf538a88f60e75f19e4e7fafc23 416 Pfam PF01593 Flavin containing amine oxidoreductase 13 266 4.8E-16 T 28-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 APY29_RS15870 3cdafbf538a88f60e75f19e4e7fafc23 416 SUPERFAMILY SSF51905 5 301 1.35E-50 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS15870 3cdafbf538a88f60e75f19e4e7fafc23 416 SUPERFAMILY SSF51905 381 411 1.35E-50 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS15870 3cdafbf538a88f60e75f19e4e7fafc23 416 Gene3D G3DSA:3.50.50.60 2 45 2.2E-4 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS12775 ca89575b886574a2197b37fbb8349823 494 Pfam PF06490 Flagellar regulatory protein FleQ 5 120 4.4E-20 T 28-03-2018 IPR010518 Flagellar regulatory FleQ APY29_RS12775 ca89575b886574a2197b37fbb8349823 494 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site APY29_RS12775 ca89575b886574a2197b37fbb8349823 494 Pfam PF02954 Bacterial regulatory protein, Fis family 444 483 1.4E-12 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS12775 ca89575b886574a2197b37fbb8349823 494 Pfam PF00158 Sigma-54 interaction domain 140 305 3.8E-70 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APY29_RS12775 ca89575b886574a2197b37fbb8349823 494 Gene3D G3DSA:3.40.50.300 133 310 1.5E-27 T 28-03-2018 APY29_RS12775 ca89575b886574a2197b37fbb8349823 494 SMART SM00382 158 305 6.3E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS12775 ca89575b886574a2197b37fbb8349823 494 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 162 175 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APY29_RS12775 ca89575b886574a2197b37fbb8349823 494 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APY29_RS12775 ca89575b886574a2197b37fbb8349823 494 Gene3D G3DSA:1.10.10.60 379 490 9.2E-18 T 28-03-2018 APY29_RS12775 ca89575b886574a2197b37fbb8349823 494 SUPERFAMILY SSF52540 140 379 4.93E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS12775 ca89575b886574a2197b37fbb8349823 494 Gene3D G3DSA:1.10.8.60 311 378 1.6E-20 T 28-03-2018 APY29_RS12775 ca89575b886574a2197b37fbb8349823 494 SUPERFAMILY SSF46689 433 486 8.51E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS12775 ca89575b886574a2197b37fbb8349823 494 SUPERFAMILY SSF46689 350 393 8.51E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS12775 ca89575b886574a2197b37fbb8349823 494 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 466 486 5.5E-12 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS12775 ca89575b886574a2197b37fbb8349823 494 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 466 5.5E-12 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS07325 1fd574f48007bcf9cf840eaab0f1d44f 75 SUPERFAMILY SSF82657 3 74 1.09E-24 T 28-03-2018 IPR002634 BolA protein APY29_RS07325 1fd574f48007bcf9cf840eaab0f1d44f 75 Pfam PF01722 BolA-like protein 21 74 7.3E-19 T 28-03-2018 IPR002634 BolA protein APY29_RS07325 1fd574f48007bcf9cf840eaab0f1d44f 75 Gene3D G3DSA:3.30.300.90 1 75 3.2E-26 T 28-03-2018 APY29_RS07325 1fd574f48007bcf9cf840eaab0f1d44f 75 PIRSF PIRSF003113 2 75 1.9E-23 T 28-03-2018 IPR002634 BolA protein APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 SUPERFAMILY SSF101967 85 167 2.75E-8 T 28-03-2018 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 SUPERFAMILY SSF101967 1040 1192 1.57E-26 T 28-03-2018 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Gene3D G3DSA:3.30.1300.30 1199 1304 7.7E-16 T 28-03-2018 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 SUPERFAMILY SSF101967 591 728 1.22E-7 T 28-03-2018 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 893 924 5.2E-7 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 447 480 3.3E-7 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1171 1207 9.5E-7 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 SUPERFAMILY SSF101967 283 469 1.96E-26 T 28-03-2018 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 SUPERFAMILY SSF101967 722 917 7.85E-22 T 28-03-2018 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Pfam PF03895 YadA-like membrane anchor domain 1251 1304 1.1E-8 T 28-03-2018 IPR005594 YadA-like, C-terminal APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Gene3D G3DSA:1.20.5.170 913 973 5.0E-7 T 28-03-2018 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Gene3D G3DSA:2.150.10.10 691 779 2.7E-11 T 28-03-2018 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Gene3D G3DSA:2.150.10.10 89 160 3.6E-9 T 28-03-2018 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Gene3D G3DSA:2.150.10.10 234 323 6.4E-12 T 28-03-2018 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 SUPERFAMILY SSF54523 1182 1304 2.82E-12 T 28-03-2018 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 SUPERFAMILY SSF101967 167 278 4.18E-14 T 28-03-2018 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Gene3D G3DSA:2.150.10.10 474 562 8.0E-7 T 28-03-2018 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1083 1109 1.7E-4 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Pfam PF05658 Head domain of trimeric autotransporter adhesin 694 716 8.4E-5 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Pfam PF05658 Head domain of trimeric autotransporter adhesin 815 840 2.9E-4 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Pfam PF05658 Head domain of trimeric autotransporter adhesin 286 312 3.0E-4 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Pfam PF05658 Head domain of trimeric autotransporter adhesin 347 373 2.0E-5 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Pfam PF05658 Head domain of trimeric autotransporter adhesin 786 806 1.1E-4 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Pfam PF05658 Head domain of trimeric autotransporter adhesin 224 250 2.6E-4 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Gene3D G3DSA:2.150.10.10 324 473 6.3E-28 T 28-03-2018 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Gene3D G3DSA:2.150.10.10 780 912 2.7E-22 T 28-03-2018 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Gene3D G3DSA:2.150.10.10 1025 1198 6.7E-30 T 28-03-2018 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Gene3D G3DSA:2.150.10.10 161 233 4.5E-10 T 28-03-2018 APY29_RS04435 ffa38d05f515de1c4f190e3454ac3ff5 1304 Gene3D G3DSA:2.150.10.10 563 690 4.5E-15 T 28-03-2018 APY29_RS23145 aff2d6da34a058cda60e0b4eaf6a6381 464 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 113 407 1.7E-11 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APY29_RS23145 aff2d6da34a058cda60e0b4eaf6a6381 464 SUPERFAMILY SSF53590 110 359 9.16E-30 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APY29_RS23145 aff2d6da34a058cda60e0b4eaf6a6381 464 Gene3D G3DSA:3.90.245.10 101 444 2.7E-31 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APY29_RS22490 c22584d8a70ff16986be1f2e5521a60e 529 Pfam PF13469 Sulfotransferase family 283 471 3.0E-44 T 28-03-2018 APY29_RS22490 c22584d8a70ff16986be1f2e5521a60e 529 SUPERFAMILY SSF48452 9 176 3.96E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS22490 c22584d8a70ff16986be1f2e5521a60e 529 SUPERFAMILY SSF52540 281 507 2.3E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS22490 c22584d8a70ff16986be1f2e5521a60e 529 Gene3D G3DSA:1.25.40.10 1 96 7.3E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS22490 c22584d8a70ff16986be1f2e5521a60e 529 Gene3D G3DSA:1.25.40.10 97 213 7.3E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS22490 c22584d8a70ff16986be1f2e5521a60e 529 Gene3D G3DSA:3.40.50.300 279 512 1.6E-36 T 28-03-2018 APY29_RS02605 8d82e3359ba9b8faf3a7c7fed0ede49d 377 Gene3D G3DSA:3.30.420.40 201 377 3.5E-24 T 28-03-2018 APY29_RS02605 8d82e3359ba9b8faf3a7c7fed0ede49d 377 Gene3D G3DSA:3.30.420.40 9 194 3.4E-57 T 28-03-2018 APY29_RS02605 8d82e3359ba9b8faf3a7c7fed0ede49d 377 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 10 377 41.914 T 28-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 APY29_RS02605 8d82e3359ba9b8faf3a7c7fed0ede49d 377 SUPERFAMILY SSF53067 153 350 7.12E-26 T 28-03-2018 APY29_RS02605 8d82e3359ba9b8faf3a7c7fed0ede49d 377 SUPERFAMILY SSF53067 76 121 7.12E-26 T 28-03-2018 APY29_RS02605 8d82e3359ba9b8faf3a7c7fed0ede49d 377 SUPERFAMILY SSF53067 10 42 7.12E-26 T 28-03-2018 APY29_RS02605 8d82e3359ba9b8faf3a7c7fed0ede49d 377 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 11 376 8.3E-151 T 28-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 APY29_RS04255 d23d5c757fa88141692b6ec0d448765c 388 PIRSF PIRSF000124 1 388 1.7E-136 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 APY29_RS04255 d23d5c757fa88141692b6ec0d448765c 388 Gene3D G3DSA:1.10.1040.10 212 287 2.4E-26 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APY29_RS04255 d23d5c757fa88141692b6ec0d448765c 388 SUPERFAMILY SSF52413 283 387 1.05E-26 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 APY29_RS04255 d23d5c757fa88141692b6ec0d448765c 388 SMART SM00984 300 387 9.9E-15 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 APY29_RS04255 d23d5c757fa88141692b6ec0d448765c 388 SUPERFAMILY SSF51735 1 194 1.32E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS04255 d23d5c757fa88141692b6ec0d448765c 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 374 2.6E-7 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 APY29_RS04255 d23d5c757fa88141692b6ec0d448765c 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 2.6E-31 T 28-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 APY29_RS04255 d23d5c757fa88141692b6ec0d448765c 388 Gene3D G3DSA:1.20.5.100 194 211 2.7E-14 T 28-03-2018 APY29_RS04255 d23d5c757fa88141692b6ec0d448765c 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 8.2E-100 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 APY29_RS04255 d23d5c757fa88141692b6ec0d448765c 388 SUPERFAMILY SSF48179 191 287 6.46E-30 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APY29_RS04255 d23d5c757fa88141692b6ec0d448765c 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 1.3E-26 T 28-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 APY29_RS04255 d23d5c757fa88141692b6ec0d448765c 388 Gene3D G3DSA:3.40.50.720 288 388 2.7E-16 T 28-03-2018 APY29_RS04255 d23d5c757fa88141692b6ec0d448765c 388 PIRSF PIRSF500134 338 388 0.027 T 28-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 APY29_RS04255 d23d5c757fa88141692b6ec0d448765c 388 PIRSF PIRSF500134 1 342 4.1E-119 T 28-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 APY29_RS04255 d23d5c757fa88141692b6ec0d448765c 388 Gene3D G3DSA:3.40.50.720 1 193 7.4E-48 T 28-03-2018 APY29_RS10900 dce99d3eaf1b5f53d2f5cfd8b84493a1 330 SUPERFAMILY SSF82861 50 133 5.23E-18 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APY29_RS10900 dce99d3eaf1b5f53d2f5cfd8b84493a1 330 Pfam PF00924 Mechanosensitive ion channel 92 289 3.2E-48 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APY29_RS10900 dce99d3eaf1b5f53d2f5cfd8b84493a1 330 SUPERFAMILY SSF50182 134 200 3.6E-16 T 28-03-2018 IPR010920 LSM domain APY29_RS10900 dce99d3eaf1b5f53d2f5cfd8b84493a1 330 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 164 198 - T 28-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 APY29_RS10900 dce99d3eaf1b5f53d2f5cfd8b84493a1 330 Gene3D G3DSA:2.30.30.60 152 200 1.6E-13 T 28-03-2018 APY29_RS10900 dce99d3eaf1b5f53d2f5cfd8b84493a1 330 Gene3D G3DSA:3.30.70.100 201 294 6.1E-22 T 28-03-2018 APY29_RS10900 dce99d3eaf1b5f53d2f5cfd8b84493a1 330 SUPERFAMILY SSF82689 203 299 7.85E-26 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APY29_RS16405 f775f11730824c5e008992a95fd5fdb9 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 379 3.0E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS16405 f775f11730824c5e008992a95fd5fdb9 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 339 3.0E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS16405 f775f11730824c5e008992a95fd5fdb9 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 360 3.0E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS16405 f775f11730824c5e008992a95fd5fdb9 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 325 3.0E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS16405 f775f11730824c5e008992a95fd5fdb9 387 SUPERFAMILY SSF55785 31 142 4.64E-22 T 28-03-2018 IPR000014 PAS domain APY29_RS16405 f775f11730824c5e008992a95fd5fdb9 387 Gene3D G3DSA:3.30.450.20 16 148 2.1E-24 T 28-03-2018 APY29_RS16405 f775f11730824c5e008992a95fd5fdb9 387 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 263 380 3.8E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16405 f775f11730824c5e008992a95fd5fdb9 387 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 28 138 2.0E-18 T 28-03-2018 IPR000014 PAS domain APY29_RS16405 f775f11730824c5e008992a95fd5fdb9 387 SUPERFAMILY SSF55874 211 380 5.24E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16405 f775f11730824c5e008992a95fd5fdb9 387 Gene3D G3DSA:1.10.287.130 149 217 3.8E-6 T 28-03-2018 APY29_RS16405 f775f11730824c5e008992a95fd5fdb9 387 Gene3D G3DSA:3.30.565.10 221 387 4.1E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16405 f775f11730824c5e008992a95fd5fdb9 387 Pfam PF13426 PAS domain 32 132 6.1E-9 T 28-03-2018 IPR000014 PAS domain APY29_RS16405 f775f11730824c5e008992a95fd5fdb9 387 SMART SM00091 18 85 1.4E-4 T 28-03-2018 IPR000014 PAS domain APY29_RS16405 f775f11730824c5e008992a95fd5fdb9 387 SMART SM00387 262 382 4.7E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16405 f775f11730824c5e008992a95fd5fdb9 387 SMART SM00388 155 221 6.3E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS16405 f775f11730824c5e008992a95fd5fdb9 387 SUPERFAMILY SSF47384 150 218 6.67E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS02180 65b0a33a99604e56a3005c440a9f09ff 429 SUPERFAMILY SSF160113 353 403 2.35E-10 T 28-03-2018 IPR010879 Domain of unknown function DUF1508 APY29_RS02180 65b0a33a99604e56a3005c440a9f09ff 429 Gene3D G3DSA:1.10.240.10 212 299 1.3E-21 T 28-03-2018 APY29_RS02180 65b0a33a99604e56a3005c440a9f09ff 429 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 1.1E-20 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 APY29_RS02180 65b0a33a99604e56a3005c440a9f09ff 429 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 150 171 1.1E-20 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 APY29_RS02180 65b0a33a99604e56a3005c440a9f09ff 429 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 202 212 1.1E-20 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 APY29_RS02180 65b0a33a99604e56a3005c440a9f09ff 429 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 1.1E-20 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 APY29_RS02180 65b0a33a99604e56a3005c440a9f09ff 429 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 3.1E-55 T 28-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS02180 65b0a33a99604e56a3005c440a9f09ff 429 SUPERFAMILY SSF52374 4 332 1.01E-77 T 28-03-2018 APY29_RS02180 65b0a33a99604e56a3005c440a9f09ff 429 Gene3D G3DSA:3.40.50.620 1 211 2.4E-65 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS02180 65b0a33a99604e56a3005c440a9f09ff 429 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 2 333 36.568 T 28-03-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 APY29_RS02180 65b0a33a99604e56a3005c440a9f09ff 429 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 1 332 6.3E-88 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 APY29_RS13090 0eeb9adcae13222aed2f657a0ee18e06 668 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 281 341 8.9E-16 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 APY29_RS13090 0eeb9adcae13222aed2f657a0ee18e06 668 SUPERFAMILY SSF55874 345 526 1.24E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS13090 0eeb9adcae13222aed2f657a0ee18e06 668 Gene3D G3DSA:3.30.565.10 345 533 1.9E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS13090 0eeb9adcae13222aed2f657a0ee18e06 668 SUPERFAMILY SSF50341 527 659 9.94E-32 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS13090 0eeb9adcae13222aed2f657a0ee18e06 668 SMART SM00260 520 659 7.4E-34 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS13090 0eeb9adcae13222aed2f657a0ee18e06 668 SUPERFAMILY SSF47384 281 344 6.67E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS13090 0eeb9adcae13222aed2f657a0ee18e06 668 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 391 527 1.2E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS13090 0eeb9adcae13222aed2f657a0ee18e06 668 SMART SM00387 388 528 9.3E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS13090 0eeb9adcae13222aed2f657a0ee18e06 668 Gene3D G3DSA:1.10.287.560 280 344 1.3E-16 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 APY29_RS13090 0eeb9adcae13222aed2f657a0ee18e06 668 SMART SM01231 280 343 4.3E-18 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 APY29_RS13090 0eeb9adcae13222aed2f657a0ee18e06 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 4.7E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS13090 0eeb9adcae13222aed2f657a0ee18e06 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 447 4.7E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS13090 0eeb9adcae13222aed2f657a0ee18e06 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 482 4.7E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS13090 0eeb9adcae13222aed2f657a0ee18e06 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 525 4.7E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS13090 0eeb9adcae13222aed2f657a0ee18e06 668 Gene3D G3DSA:2.40.50.180 543 612 2.9E-13 T 28-03-2018 APY29_RS13090 0eeb9adcae13222aed2f657a0ee18e06 668 Gene3D G3DSA:2.30.30.40 613 659 2.8E-21 T 28-03-2018 APY29_RS13090 0eeb9adcae13222aed2f657a0ee18e06 668 SMART SM00073 4 102 1.2E-28 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS13090 0eeb9adcae13222aed2f657a0ee18e06 668 Pfam PF01584 CheW-like domain 533 662 4.5E-27 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS13090 0eeb9adcae13222aed2f657a0ee18e06 668 Pfam PF01627 Hpt domain 10 99 9.2E-18 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS13090 0eeb9adcae13222aed2f657a0ee18e06 668 Gene3D G3DSA:1.20.120.160 1 146 1.7E-36 T 28-03-2018 APY29_RS13090 0eeb9adcae13222aed2f657a0ee18e06 668 SUPERFAMILY SSF47226 5 129 1.83E-31 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS01320 c81f1a3bed681e88cba98e45cbdd0d34 223 Gene3D G3DSA:3.50.30.40 17 192 1.5E-49 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein APY29_RS01320 c81f1a3bed681e88cba98e45cbdd0d34 223 Pfam PF03737 Aldolase/RraA 33 172 7.7E-40 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein APY29_RS01320 c81f1a3bed681e88cba98e45cbdd0d34 223 TIGRFAM TIGR02798 ligK_PcmE: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 4 223 1.1E-112 T 28-03-2018 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase KEGG: 00362+4.1.3.17|KEGG: 00660+4.1.3.17|MetaCyc: PWY-7701 APY29_RS01320 c81f1a3bed681e88cba98e45cbdd0d34 223 SUPERFAMILY SSF89562 22 183 5.49E-48 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein APY29_RS08950 e7901efeff5d6f2b3ffc869fe58e7297 673 SUPERFAMILY SSF52540 3 415 1.19E-132 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS08950 e7901efeff5d6f2b3ffc869fe58e7297 673 Gene3D G3DSA:3.40.50.300 11 415 6.8E-31 T 28-03-2018 APY29_RS08950 e7901efeff5d6f2b3ffc869fe58e7297 673 SUPERFAMILY SSF52540 459 582 1.3E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS08950 e7901efeff5d6f2b3ffc869fe58e7297 673 SUPERFAMILY SSF52540 37 82 1.3E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS08950 e7901efeff5d6f2b3ffc869fe58e7297 673 SUPERFAMILY SSF46600 623 669 8.76E-12 T 28-03-2018 IPR001943 UVR domain GO:0005515 APY29_RS08950 e7901efeff5d6f2b3ffc869fe58e7297 673 Gene3D G3DSA:3.40.50.300 416 589 1.5E-31 T 28-03-2018 APY29_RS08950 e7901efeff5d6f2b3ffc869fe58e7297 673 Pfam PF04851 Type III restriction enzyme, res subunit 16 105 2.4E-9 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APY29_RS08950 e7901efeff5d6f2b3ffc869fe58e7297 673 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 668 0.0 T 28-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APY29_RS08950 e7901efeff5d6f2b3ffc869fe58e7297 673 Gene3D G3DSA:4.10.860.10 613 673 4.2E-16 T 28-03-2018 IPR001943 UVR domain GO:0005515 APY29_RS08950 e7901efeff5d6f2b3ffc869fe58e7297 673 Pfam PF12344 Ultra-violet resistance protein B 552 593 8.3E-23 T 28-03-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain APY29_RS08950 e7901efeff5d6f2b3ffc869fe58e7297 673 SMART SM00487 9 426 5.3E-27 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APY29_RS08950 e7901efeff5d6f2b3ffc869fe58e7297 673 SMART SM00490 460 546 2.5E-20 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS08950 e7901efeff5d6f2b3ffc869fe58e7297 673 Pfam PF02151 UvrB/uvrC motif 637 669 5.6E-10 T 28-03-2018 IPR001943 UVR domain GO:0005515 APY29_RS08950 e7901efeff5d6f2b3ffc869fe58e7297 673 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 670 43.074 T 28-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APY29_RS08950 e7901efeff5d6f2b3ffc869fe58e7297 673 Pfam PF00271 Helicase conserved C-terminal domain 441 544 1.4E-17 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS07285 6ddc56afec260a9d8d75e1cf239ba212 152 SUPERFAMILY SSF55804 13 142 5.23E-32 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 APY29_RS07285 6ddc56afec260a9d8d75e1cf239ba212 152 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 49 65 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain APY29_RS07285 6ddc56afec260a9d8d75e1cf239ba212 152 Gene3D G3DSA:3.40.930.10 4 144 1.2E-33 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 APY29_RS07285 6ddc56afec260a9d8d75e1cf239ba212 152 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 16 143 2.5E-30 T 28-03-2018 IPR002178 PTS EIIA type-2 domain APY29_RS21250 ce7337530163579d7d719472caca129f 286 Gene3D G3DSA:3.30.200.20 16 125 2.2E-19 T 28-03-2018 APY29_RS21250 ce7337530163579d7d719472caca129f 286 Gene3D G3DSA:1.10.510.10 131 236 6.5E-7 T 28-03-2018 APY29_RS21250 ce7337530163579d7d719472caca129f 286 SUPERFAMILY SSF56112 18 205 8.53E-19 T 28-03-2018 IPR011009 Protein kinase-like domain APY29_RS21250 ce7337530163579d7d719472caca129f 286 Pfam PF01163 RIO1 family 31 221 1.7E-35 T 28-03-2018 APY29_RS21250 ce7337530163579d7d719472caca129f 286 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 28-03-2018 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|Reactome: R-HSA-6791226 APY29_RS21250 ce7337530163579d7d719472caca129f 286 SMART SM00090 2 235 2.5E-9 T 28-03-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|Reactome: R-HSA-6791226 APY29_RS04875 880a22744083ecaa16d8edac85e35680 449 ProSitePatterns PS00217 Sugar transport proteins signature 2. 135 160 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APY29_RS04875 880a22744083ecaa16d8edac85e35680 449 Gene3D G3DSA:1.20.1250.20 23 230 2.9E-22 T 28-03-2018 APY29_RS04875 880a22744083ecaa16d8edac85e35680 449 Gene3D G3DSA:1.20.1250.20 246 443 9.0E-20 T 28-03-2018 APY29_RS04875 880a22744083ecaa16d8edac85e35680 449 Pfam PF00083 Sugar (and other) transporter 29 227 5.1E-25 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APY29_RS04875 880a22744083ecaa16d8edac85e35680 449 ProSitePatterns PS00216 Sugar transport proteins signature 1. 303 320 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APY29_RS04875 880a22744083ecaa16d8edac85e35680 449 SUPERFAMILY SSF103473 26 432 2.62E-63 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS15665 77cbf56a625773c6de43f3249df7fc37 240 Gene3D G3DSA:3.40.1160.10 1 238 9.3E-45 T 28-03-2018 APY29_RS15665 77cbf56a625773c6de43f3249df7fc37 240 Pfam PF00696 Amino acid kinase family 8 215 8.9E-30 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase APY29_RS15665 77cbf56a625773c6de43f3249df7fc37 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 3.3E-98 T 28-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 APY29_RS15665 77cbf56a625773c6de43f3249df7fc37 240 SUPERFAMILY SSF53633 5 236 4.19E-73 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase APY29_RS15665 77cbf56a625773c6de43f3249df7fc37 240 PIRSF PIRSF005650 1 240 3.7E-94 T 28-03-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 APY29_RS15665 77cbf56a625773c6de43f3249df7fc37 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 45.185 T 28-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 APY29_RS01850 d58adc6d42114a9d8be23b38008c6f17 726 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 709 726 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site APY29_RS01850 d58adc6d42114a9d8be23b38008c6f17 726 Gene3D G3DSA:2.40.170.20 181 726 1.3E-74 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS01850 d58adc6d42114a9d8be23b38008c6f17 726 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 166 1.2E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS01850 d58adc6d42114a9d8be23b38008c6f17 726 Pfam PF00593 TonB dependent receptor 241 722 2.3E-48 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS01850 d58adc6d42114a9d8be23b38008c6f17 726 SUPERFAMILY SSF56935 30 726 3.66E-124 T 28-03-2018 APY29_RS01850 d58adc6d42114a9d8be23b38008c6f17 726 Gene3D G3DSA:2.170.130.10 30 178 8.0E-28 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS01850 d58adc6d42114a9d8be23b38008c6f17 726 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 67 726 1.0E-75 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APY29_RS14545 5e33e9440878f8c7e6b00142f5f9a0cc 401 TIGRFAM TIGR01224 hutI: imidazolonepropionase 26 398 2.6E-137 T 28-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 APY29_RS14545 5e33e9440878f8c7e6b00142f5f9a0cc 401 Gene3D G3DSA:2.30.40.10 2 77 2.3E-17 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS14545 5e33e9440878f8c7e6b00142f5f9a0cc 401 SUPERFAMILY SSF51556 64 361 2.96E-82 T 28-03-2018 IPR032466 Metal-dependent hydrolase APY29_RS14545 5e33e9440878f8c7e6b00142f5f9a0cc 401 Pfam PF07969 Amidohydrolase family 113 378 1.5E-14 T 28-03-2018 IPR013108 Amidohydrolase 3 APY29_RS14545 5e33e9440878f8c7e6b00142f5f9a0cc 401 Gene3D G3DSA:3.20.20.140 78 361 3.9E-53 T 28-03-2018 APY29_RS14545 5e33e9440878f8c7e6b00142f5f9a0cc 401 SUPERFAMILY SSF51338 363 399 3.29E-30 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS14545 5e33e9440878f8c7e6b00142f5f9a0cc 401 SUPERFAMILY SSF51338 2 64 3.29E-30 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS14545 5e33e9440878f8c7e6b00142f5f9a0cc 401 Hamap MF_00372 Imidazolonepropionase [hutI]. 4 401 40.666 T 28-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 APY29_RS05700 e56cecddaf97268fe3d19ea31cf0e3b8 1155 SUPERFAMILY SSF49899 62 201 5.81E-15 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain APY29_RS05700 e56cecddaf97268fe3d19ea31cf0e3b8 1155 SUPERFAMILY SSF49785 267 461 1.34E-41 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS05700 e56cecddaf97268fe3d19ea31cf0e3b8 1155 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 334 402 2.6E-11 T 28-03-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APY29_RS05700 e56cecddaf97268fe3d19ea31cf0e3b8 1155 SUPERFAMILY SSF49303 952 1050 5.04E-22 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APY29_RS05700 e56cecddaf97268fe3d19ea31cf0e3b8 1155 Gene3D G3DSA:2.60.120.260 209 462 5.7E-41 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS05700 e56cecddaf97268fe3d19ea31cf0e3b8 1155 SUPERFAMILY SSF49303 1037 1145 7.91E-28 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APY29_RS05700 e56cecddaf97268fe3d19ea31cf0e3b8 1155 SUPERFAMILY SSF49303 467 578 9.35E-22 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APY29_RS05700 e56cecddaf97268fe3d19ea31cf0e3b8 1155 Gene3D G3DSA:2.60.40.10 1062 1151 2.6E-20 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS05700 e56cecddaf97268fe3d19ea31cf0e3b8 1155 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 653 789 2.8E-7 T 28-03-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 APY29_RS05700 e56cecddaf97268fe3d19ea31cf0e3b8 1155 Pfam PF00703 Glycosyl hydrolases family 2 474 578 3.1E-13 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APY29_RS05700 e56cecddaf97268fe3d19ea31cf0e3b8 1155 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 60 194 5.0E-14 T 28-03-2018 APY29_RS05700 e56cecddaf97268fe3d19ea31cf0e3b8 1155 Gene3D G3DSA:2.60.120.200 49 208 1.2E-16 T 28-03-2018 APY29_RS05700 e56cecddaf97268fe3d19ea31cf0e3b8 1155 Gene3D G3DSA:2.60.40.10 465 578 4.6E-18 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS05700 e56cecddaf97268fe3d19ea31cf0e3b8 1155 Gene3D G3DSA:2.60.40.10 952 1061 1.5E-19 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS05700 e56cecddaf97268fe3d19ea31cf0e3b8 1155 SUPERFAMILY SSF51445 650 948 7.25E-66 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS05700 e56cecddaf97268fe3d19ea31cf0e3b8 1155 Gene3D G3DSA:3.20.20.80 648 950 6.2E-48 T 28-03-2018 APY29_RS19255 016bfb2fa966f36452875c3456bbe1a7 165 Pfam PF11776 Nickel/cobalt transporter regulator 114 160 1.5E-16 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB APY29_RS19255 016bfb2fa966f36452875c3456bbe1a7 165 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 114 162 3.0E-21 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB APY29_RS19255 016bfb2fa966f36452875c3456bbe1a7 165 Gene3D G3DSA:3.10.450.160 26 165 1.7E-8 T 28-03-2018 APY29_RS04950 eea6223169b498e27a5ad0c4c0e610cb 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 1.7E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS04950 eea6223169b498e27a5ad0c4c0e610cb 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 1.7E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS04950 eea6223169b498e27a5ad0c4c0e610cb 217 Gene3D G3DSA:1.10.10.60 2 74 1.9E-19 T 28-03-2018 APY29_RS04950 eea6223169b498e27a5ad0c4c0e610cb 217 SUPERFAMILY SSF46689 19 84 2.54E-18 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS04950 eea6223169b498e27a5ad0c4c0e610cb 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 74 4.8E-16 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS04950 eea6223169b498e27a5ad0c4c0e610cb 217 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 160 214 2.5E-16 T 28-03-2018 APY29_RS04950 eea6223169b498e27a5ad0c4c0e610cb 217 Gene3D G3DSA:1.10.357.10 75 217 3.1E-26 T 28-03-2018 APY29_RS04950 eea6223169b498e27a5ad0c4c0e610cb 217 SUPERFAMILY SSF48498 93 212 1.87E-6 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APY29_RS12915 0fa8b30054af2df63e0e553b4f681071 973 Gene3D G3DSA:2.130.10.10 445 727 4.3E-19 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS12915 0fa8b30054af2df63e0e553b4f681071 973 Gene3D G3DSA:2.130.10.10 390 444 2.4E-4 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS12915 0fa8b30054af2df63e0e553b4f681071 973 Gene3D G3DSA:3.30.70.270 795 964 2.1E-52 T 28-03-2018 APY29_RS12915 0fa8b30054af2df63e0e553b4f681071 973 SMART SM00267 794 963 2.2E-47 T 28-03-2018 IPR000160 GGDEF domain APY29_RS12915 0fa8b30054af2df63e0e553b4f681071 973 Gene3D G3DSA:2.130.10.10 33 297 1.8E-18 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS12915 0fa8b30054af2df63e0e553b4f681071 973 SUPERFAMILY SSF55073 810 960 9.42E-43 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS12915 0fa8b30054af2df63e0e553b4f681071 973 Pfam PF07494 Two component regulator propeller 40 62 4.1E-4 T 28-03-2018 IPR011110 Two component regulator propeller APY29_RS12915 0fa8b30054af2df63e0e553b4f681071 973 SUPERFAMILY SSF50998 82 223 1.18E-9 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APY29_RS12915 0fa8b30054af2df63e0e553b4f681071 973 SUPERFAMILY SSF50998 279 489 1.18E-9 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APY29_RS12915 0fa8b30054af2df63e0e553b4f681071 973 SUPERFAMILY SSF63829 390 579 2.29E-14 T 28-03-2018 APY29_RS12915 0fa8b30054af2df63e0e553b4f681071 973 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 803 962 8.6E-40 T 28-03-2018 IPR000160 GGDEF domain APY29_RS12915 0fa8b30054af2df63e0e553b4f681071 973 Pfam PF00990 Diguanylate cyclase, GGDEF domain 805 959 2.0E-39 T 28-03-2018 IPR000160 GGDEF domain APY29_RS12915 0fa8b30054af2df63e0e553b4f681071 973 Pfam PF07495 Y_Y_Y domain 676 734 2.8E-12 T 28-03-2018 IPR011123 Two component regulator three Y APY29_RS04345 311f22645e5a3d2ceb4cf6686a79db5d 377 Gene3D G3DSA:2.160.20.10 26 97 6.8E-12 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS04345 311f22645e5a3d2ceb4cf6686a79db5d 377 Gene3D G3DSA:2.160.20.10 98 377 2.2E-58 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS04345 311f22645e5a3d2ceb4cf6686a79db5d 377 SUPERFAMILY SSF51126 27 376 4.09E-83 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS04345 311f22645e5a3d2ceb4cf6686a79db5d 377 Pfam PF00544 Pectate lyase 77 308 2.9E-56 T 28-03-2018 IPR002022 Pectate lyase APY29_RS04345 311f22645e5a3d2ceb4cf6686a79db5d 377 SMART SM00656 51 314 3.8E-60 T 28-03-2018 IPR002022 Pectate lyase APY29_RS20180 23816d8bbad4e3541ed887f92b05a617 233 Gene3D G3DSA:3.40.50.300 11 224 6.2E-10 T 28-03-2018 APY29_RS20180 23816d8bbad4e3541ed887f92b05a617 233 SUPERFAMILY SSF52540 12 70 8.75E-9 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS20180 23816d8bbad4e3541ed887f92b05a617 233 Pfam PF13476 AAA domain 26 96 9.8E-7 T 28-03-2018 APY29_RS05685 566d260b4a5df84f4ec9ff44ce65c296 501 Pfam PF00135 Carboxylesterase family 28 474 3.3E-102 T 28-03-2018 IPR002018 Carboxylesterase, type B APY29_RS05685 566d260b4a5df84f4ec9ff44ce65c296 501 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 200 215 - T 28-03-2018 IPR019826 Carboxylesterase type B, active site APY29_RS05685 566d260b4a5df84f4ec9ff44ce65c296 501 Gene3D G3DSA:3.40.50.1820 18 496 3.0E-120 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS05685 566d260b4a5df84f4ec9ff44ce65c296 501 SUPERFAMILY SSF53474 27 477 1.08E-115 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS14570 13e4777329ddbda0092d547e910ae824 822 SMART SM00564 358 399 130.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS14570 13e4777329ddbda0092d547e910ae824 822 SMART SM00564 236 267 4.3E-5 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS14570 13e4777329ddbda0092d547e910ae824 822 SMART SM00564 741 774 0.0037 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS14570 13e4777329ddbda0092d547e910ae824 822 SMART SM00564 302 343 470.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS14570 13e4777329ddbda0092d547e910ae824 822 Pfam PF13360 PQQ-like domain 696 795 1.4E-6 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat APY29_RS14570 13e4777329ddbda0092d547e910ae824 822 Pfam PF13360 PQQ-like domain 224 397 1.1E-7 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat APY29_RS14570 13e4777329ddbda0092d547e910ae824 822 Gene3D G3DSA:2.140.10.10 742 820 1.4E-8 T 28-03-2018 APY29_RS14570 13e4777329ddbda0092d547e910ae824 822 Gene3D G3DSA:2.140.10.10 665 741 0.021 T 28-03-2018 APY29_RS14570 13e4777329ddbda0092d547e910ae824 822 Gene3D G3DSA:2.140.10.10 161 632 4.6E-82 T 28-03-2018 APY29_RS14570 13e4777329ddbda0092d547e910ae824 822 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 18 818 0.0 T 28-03-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 APY29_RS14570 13e4777329ddbda0092d547e910ae824 822 SUPERFAMILY SSF50998 669 818 5.23E-143 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APY29_RS14570 13e4777329ddbda0092d547e910ae824 822 SUPERFAMILY SSF50998 183 540 5.23E-143 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APY29_RS14570 13e4777329ddbda0092d547e910ae824 822 SUPERFAMILY SSF50998 576 642 5.23E-143 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APY29_RS21570 b2e50ae2d6b2723176ddf383747a1356 306 Gene3D G3DSA:3.40.50.1820 32 305 1.3E-43 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS21570 b2e50ae2d6b2723176ddf383747a1356 306 SUPERFAMILY SSF53474 40 304 7.97E-48 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS21570 b2e50ae2d6b2723176ddf383747a1356 306 Pfam PF12697 Alpha/beta hydrolase family 65 297 6.6E-21 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS21570 b2e50ae2d6b2723176ddf383747a1356 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 104 4.1E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS21570 b2e50ae2d6b2723176ddf383747a1356 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 249 263 4.1E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS21570 b2e50ae2d6b2723176ddf383747a1356 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 136 149 4.1E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS02960 de146156111c3f2b16b73e7dd4fc259f 430 SUPERFAMILY SSF51905 12 337 7.29E-33 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS02960 de146156111c3f2b16b73e7dd4fc259f 430 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 327 3.4E-55 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS02960 de146156111c3f2b16b73e7dd4fc259f 430 Gene3D G3DSA:3.50.50.60 9 153 1.1E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS02960 de146156111c3f2b16b73e7dd4fc259f 430 Gene3D G3DSA:3.50.50.60 163 358 1.2E-32 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS02960 de146156111c3f2b16b73e7dd4fc259f 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 164 182 7.3E-8 T 28-03-2018 APY29_RS02960 de146156111c3f2b16b73e7dd4fc259f 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 7.3E-8 T 28-03-2018 APY29_RS02960 de146156111c3f2b16b73e7dd4fc259f 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 7.3E-8 T 28-03-2018 APY29_RS02960 de146156111c3f2b16b73e7dd4fc259f 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 1.4E-6 T 28-03-2018 APY29_RS02960 de146156111c3f2b16b73e7dd4fc259f 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 300 307 1.4E-6 T 28-03-2018 APY29_RS02960 de146156111c3f2b16b73e7dd4fc259f 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 164 189 1.4E-6 T 28-03-2018 APY29_RS12925 e28f0e9fd454338d3e3b5b8f43c767ce 973 SUPERFAMILY SSF63829 353 622 2.62E-9 T 28-03-2018 APY29_RS12925 e28f0e9fd454338d3e3b5b8f43c767ce 973 Gene3D G3DSA:3.30.70.270 794 968 7.0E-54 T 28-03-2018 APY29_RS12925 e28f0e9fd454338d3e3b5b8f43c767ce 973 SUPERFAMILY SSF55073 811 964 4.08E-41 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS12925 e28f0e9fd454338d3e3b5b8f43c767ce 973 Gene3D G3DSA:2.130.10.10 41 164 1.6E-9 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS12925 e28f0e9fd454338d3e3b5b8f43c767ce 973 Gene3D G3DSA:2.130.10.10 181 304 3.4E-6 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS12925 e28f0e9fd454338d3e3b5b8f43c767ce 973 Gene3D G3DSA:2.130.10.10 549 648 1.3E-5 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS12925 e28f0e9fd454338d3e3b5b8f43c767ce 973 Gene3D G3DSA:2.130.10.10 305 546 6.4E-17 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS12925 e28f0e9fd454338d3e3b5b8f43c767ce 973 SMART SM00267 795 966 6.8E-55 T 28-03-2018 IPR000160 GGDEF domain APY29_RS12925 e28f0e9fd454338d3e3b5b8f43c767ce 973 SUPERFAMILY SSF63829 181 355 9.16E-10 T 28-03-2018 APY29_RS12925 e28f0e9fd454338d3e3b5b8f43c767ce 973 Pfam PF07495 Y_Y_Y domain 675 737 2.1E-10 T 28-03-2018 IPR011123 Two component regulator three Y APY29_RS12925 e28f0e9fd454338d3e3b5b8f43c767ce 973 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 804 964 6.8E-44 T 28-03-2018 IPR000160 GGDEF domain APY29_RS12925 e28f0e9fd454338d3e3b5b8f43c767ce 973 Pfam PF00990 Diguanylate cyclase, GGDEF domain 806 962 2.0E-43 T 28-03-2018 IPR000160 GGDEF domain APY29_RS04970 66d17a2596eb1a3ece339fd51903d350 215 SUPERFAMILY SSF52016 1 201 2.16E-62 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APY29_RS04970 66d17a2596eb1a3ece339fd51903d350 215 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 1.2E-87 T 28-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 APY29_RS04970 66d17a2596eb1a3ece339fd51903d350 215 Gene3D G3DSA:3.20.19.10 1 184 1.6E-49 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APY29_RS04970 66d17a2596eb1a3ece339fd51903d350 215 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 44.245 T 28-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 APY29_RS04970 66d17a2596eb1a3ece339fd51903d350 215 Pfam PF00694 Aconitase C-terminal domain 1 132 7.8E-38 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS01780 c24094aa5a0d3b7f82eee6596d346c4c 347 SUPERFAMILY SSF47240 23 347 3.55E-85 T 28-03-2018 IPR009078 Ferritin-like superfamily APY29_RS01780 c24094aa5a0d3b7f82eee6596d346c4c 347 Pfam PF00268 Ribonucleotide reductase, small chain 32 305 7.2E-68 T 28-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APY29_RS01780 c24094aa5a0d3b7f82eee6596d346c4c 347 PIRSF PIRSF000355 3 347 2.4E-112 T 28-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APY29_RS01780 c24094aa5a0d3b7f82eee6596d346c4c 347 Gene3D G3DSA:1.10.620.20 10 323 2.1E-70 T 28-03-2018 APY29_RS21980 e2b0d1dc06f34e1591ed30c7f07f33f8 143 Pfam PF00472 RF-1 domain 12 137 9.0E-22 T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APY29_RS21980 e2b0d1dc06f34e1591ed30c7f07f33f8 143 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 25 41 - T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APY29_RS21980 e2b0d1dc06f34e1591ed30c7f07f33f8 143 SUPERFAMILY SSF110916 11 101 3.4E-12 T 28-03-2018 APY29_RS21980 e2b0d1dc06f34e1591ed30c7f07f33f8 143 Gene3D G3DSA:3.30.160.20 5 143 2.5E-40 T 28-03-2018 APY29_RS19225 62d312b27b085792b738112625ef5d7e 213 Gene3D G3DSA:2.40.160.10 14 212 2.5E-9 T 28-03-2018 APY29_RS07450 ba4bd3ed1406996537c0ef7f0eba31ec 228 Gene3D G3DSA:2.60.120.620 2 189 4.2E-35 T 28-03-2018 APY29_RS07450 ba4bd3ed1406996537c0ef7f0eba31ec 228 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 228 47.009 T 28-03-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 APY29_RS07450 ba4bd3ed1406996537c0ef7f0eba31ec 228 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 178 5.4E-14 T 28-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 APY29_RS07450 ba4bd3ed1406996537c0ef7f0eba31ec 228 SUPERFAMILY SSF51197 5 179 5.29E-6 T 28-03-2018 APY29_RS07450 ba4bd3ed1406996537c0ef7f0eba31ec 228 SMART SM00702 1 179 2.5E-22 T 28-03-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 APY29_RS09120 0968ace3c41a4fdde2dfc05ec5d788cc 331 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 2.5E-22 T 28-03-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APY29_RS09120 0968ace3c41a4fdde2dfc05ec5d788cc 331 Gene3D G3DSA:3.30.930.10 7 331 3.8E-84 T 28-03-2018 APY29_RS09120 0968ace3c41a4fdde2dfc05ec5d788cc 331 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 330 2.2E-101 T 28-03-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 APY29_RS09120 0968ace3c41a4fdde2dfc05ec5d788cc 331 Pfam PF01409 tRNA synthetases class II core domain (F) 92 330 1.6E-104 T 28-03-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 APY29_RS09120 0968ace3c41a4fdde2dfc05ec5d788cc 331 SUPERFAMILY SSF46589 12 99 5.75E-20 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 APY29_RS09120 0968ace3c41a4fdde2dfc05ec5d788cc 331 SUPERFAMILY SSF55681 92 330 9.52E-78 T 28-03-2018 APY29_RS09120 0968ace3c41a4fdde2dfc05ec5d788cc 331 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 330 48.505 T 28-03-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 APY29_RS16335 6096418ce3b023f357bc5c5ad8630831 135 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 6 118 27.912 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS16335 6096418ce3b023f357bc5c5ad8630831 135 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 8 117 6.6E-44 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS16335 6096418ce3b023f357bc5c5ad8630831 135 PIRSF PIRSF002191 1 135 8.3E-48 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS16335 6096418ce3b023f357bc5c5ad8630831 135 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 28-03-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS16335 6096418ce3b023f357bc5c5ad8630831 135 SUPERFAMILY SSF50104 10 121 7.22E-42 T 28-03-2018 IPR008991 Translation protein SH3-like domain APY29_RS16335 6096418ce3b023f357bc5c5ad8630831 135 PRINTS PR00061 Ribosomal protein L19 signature 92 117 6.3E-36 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS16335 6096418ce3b023f357bc5c5ad8630831 135 PRINTS PR00061 Ribosomal protein L19 signature 8 37 6.3E-36 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS16335 6096418ce3b023f357bc5c5ad8630831 135 PRINTS PR00061 Ribosomal protein L19 signature 38 67 6.3E-36 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS16335 6096418ce3b023f357bc5c5ad8630831 135 Pfam PF01245 Ribosomal protein L19 8 116 1.8E-45 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS11105 954606c47c9eaf3118b89b1808634f49 128 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 116 5.6E-15 T 28-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APY29_RS11105 954606c47c9eaf3118b89b1808634f49 128 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 17 120 1.9E-28 T 28-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 APY29_RS11105 954606c47c9eaf3118b89b1808634f49 128 Gene3D G3DSA:1.20.1300.10 15 127 2.2E-20 T 28-03-2018 APY29_RS11105 954606c47c9eaf3118b89b1808634f49 128 SUPERFAMILY SSF81343 12 123 5.67E-25 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APY29_RS10340 c9c8746ea1546aff41bbdad6f89fc61e 343 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 299 322 7.8E-13 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APY29_RS10340 c9c8746ea1546aff41bbdad6f89fc61e 343 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 45 64 7.8E-13 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APY29_RS10340 c9c8746ea1546aff41bbdad6f89fc61e 343 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 287 296 7.8E-13 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APY29_RS10340 c9c8746ea1546aff41bbdad6f89fc61e 343 Gene3D G3DSA:3.40.50.1370 1 158 9.1E-40 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APY29_RS10340 c9c8746ea1546aff41bbdad6f89fc61e 343 SUPERFAMILY SSF53671 2 335 2.1E-73 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APY29_RS10340 c9c8746ea1546aff41bbdad6f89fc61e 343 Gene3D G3DSA:3.40.50.1370 159 338 1.6E-40 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APY29_RS10340 c9c8746ea1546aff41bbdad6f89fc61e 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 35 57 2.1E-10 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APY29_RS10340 c9c8746ea1546aff41bbdad6f89fc61e 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 147 164 2.1E-10 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APY29_RS10340 c9c8746ea1546aff41bbdad6f89fc61e 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 315 329 2.1E-10 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APY29_RS10340 c9c8746ea1546aff41bbdad6f89fc61e 343 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 161 2.7E-36 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APY29_RS10340 c9c8746ea1546aff41bbdad6f89fc61e 343 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 170 332 7.2E-33 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APY29_RS10760 fbfa34af0d09e1d2d407d67fb9570c84 128 Pfam PF04956 TrbC/VIRB2 family 33 118 6.1E-24 T 28-03-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 APY29_RS04015 3638cdda4e2d80b7e37af1d8fc58a2a6 402 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 4.2E-24 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal APY29_RS04015 3638cdda4e2d80b7e37af1d8fc58a2a6 402 SUPERFAMILY SSF53901 1 251 5.26E-64 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS04015 3638cdda4e2d80b7e37af1d8fc58a2a6 402 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site APY29_RS04015 3638cdda4e2d80b7e37af1d8fc58a2a6 402 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 9.1E-45 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal APY29_RS04015 3638cdda4e2d80b7e37af1d8fc58a2a6 402 SMART SM00825 Beta-ketoacyl synthase 4 402 1.1E-11 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APY29_RS04015 3638cdda4e2d80b7e37af1d8fc58a2a6 402 Gene3D G3DSA:3.40.47.10 4 257 3.1E-60 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS04015 3638cdda4e2d80b7e37af1d8fc58a2a6 402 SUPERFAMILY SSF53901 213 400 7.4E-59 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS04015 3638cdda4e2d80b7e37af1d8fc58a2a6 402 Gene3D G3DSA:3.40.47.10 258 401 2.0E-36 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS00675 acf58324326dd706173935677cdf785a 731 Pfam PF00593 TonB dependent receptor 254 727 2.9E-46 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS00675 acf58324326dd706173935677cdf785a 731 Gene3D G3DSA:2.40.170.20 195 729 9.6E-70 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS00675 acf58324326dd706173935677cdf785a 731 Gene3D G3DSA:2.170.130.10 49 186 2.8E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS00675 acf58324326dd706173935677cdf785a 731 SUPERFAMILY SSF56935 50 729 2.05E-105 T 28-03-2018 APY29_RS00675 acf58324326dd706173935677cdf785a 731 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 181 7.0E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS13025 e41ce25cd323905f07e2f85c7afbfa90 232 Pfam PF14022 Protein of unknown function (DUF4238) 1 187 1.6E-9 T 28-03-2018 IPR025332 Protein of unknown function DUF4238 APY29_RS07220 94db00f3c3b1d44ae08447c4c06ff32d 462 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APY29_RS07220 94db00f3c3b1d44ae08447c4c06ff32d 462 PIRSF PIRSF006060 7 457 1.0E-68 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APY29_RS07220 94db00f3c3b1d44ae08447c4c06ff32d 462 Pfam PF00324 Amino acid permease 28 443 9.4E-93 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 Gene3D G3DSA:2.20.28.20 139 162 1.2E-14 T 28-03-2018 APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 Gene3D G3DSA:2.170.220.10 163 248 6.1E-16 T 28-03-2018 APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 566 693 2.2E-37 T 28-03-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 535 1.5E-157 T 28-03-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 Gene3D G3DSA:3.40.50.620 2 76 2.8E-20 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 SUPERFAMILY SSF47323 388 546 6.98E-39 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 SUPERFAMILY SSF57770 139 173 1.1E-11 T 28-03-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 SUPERFAMILY SSF50249 587 693 7.1E-28 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 Gene3D G3DSA:3.40.50.620 249 368 5.3E-17 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 Gene3D G3DSA:2.40.50.140 584 694 8.4E-25 T 28-03-2018 APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 Hamap MF_00098 Methionine--tRNA ligase [metG]. 3 545 38.538 T 28-03-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 PRINTS PR01041 Methionyl-tRNA synthetase signature 289 304 8.7E-25 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 PRINTS PR01041 Methionyl-tRNA synthetase signature 250 261 8.7E-25 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 8.7E-25 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 PRINTS PR01041 Methionyl-tRNA synthetase signature 383 394 8.7E-25 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 8.7E-25 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 8.7E-25 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 Gene3D G3DSA:1.10.730.10 372 537 1.7E-38 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 Pfam PF01588 Putative tRNA binding domain 597 691 3.0E-20 T 28-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 SUPERFAMILY SSF52374 173 385 5.63E-88 T 28-03-2018 APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 SUPERFAMILY SSF52374 4 138 5.63E-88 T 28-03-2018 APY29_RS15830 87d82c61aff135e11ba4b04a535806f4 694 Pfam PF09334 tRNA synthetases class I (M) 6 395 9.7E-149 T 28-03-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS22330 f444febd8a5e8abbaff2cf2555415902 115 ProSitePatterns PS00018 EF-hand calcium-binding domain. 98 110 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site APY29_RS22330 f444febd8a5e8abbaff2cf2555415902 115 ProSitePatterns PS00018 EF-hand calcium-binding domain. 37 49 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site APY29_RS22330 f444febd8a5e8abbaff2cf2555415902 115 Pfam PF13202 EF hand 94 110 0.02 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 APY29_RS22330 f444febd8a5e8abbaff2cf2555415902 115 Pfam PF13202 EF hand 31 49 7.1E-5 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 APY29_RS22330 f444febd8a5e8abbaff2cf2555415902 115 Gene3D G3DSA:1.10.238.10 9 40 4.1E-5 T 28-03-2018 APY29_RS22330 f444febd8a5e8abbaff2cf2555415902 115 SUPERFAMILY SSF47473 29 112 1.52E-13 T 28-03-2018 IPR011992 EF-hand domain pair APY29_RS22330 f444febd8a5e8abbaff2cf2555415902 115 Gene3D G3DSA:1.10.238.10 41 63 2.5E-8 T 28-03-2018 APY29_RS22330 f444febd8a5e8abbaff2cf2555415902 115 Gene3D G3DSA:1.10.238.10 64 112 4.7E-5 T 28-03-2018 APY29_RS10170 235d2a876153031b7891187b72f9c34b 277 Gene3D G3DSA:3.40.190.80 147 276 2.2E-34 T 28-03-2018 APY29_RS10170 235d2a876153031b7891187b72f9c34b 277 SUPERFAMILY SSF56655 5 264 1.44E-77 T 28-03-2018 APY29_RS10170 235d2a876153031b7891187b72f9c34b 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 178 199 1.5E-55 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 APY29_RS10170 235d2a876153031b7891187b72f9c34b 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 1.5E-55 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 APY29_RS10170 235d2a876153031b7891187b72f9c34b 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 1.5E-55 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 APY29_RS10170 235d2a876153031b7891187b72f9c34b 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 209 233 1.5E-55 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 APY29_RS10170 235d2a876153031b7891187b72f9c34b 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 131 154 1.5E-55 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 APY29_RS10170 235d2a876153031b7891187b72f9c34b 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 82 98 1.5E-55 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 APY29_RS10170 235d2a876153031b7891187b72f9c34b 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 105 124 1.1E-20 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 APY29_RS10170 235d2a876153031b7891187b72f9c34b 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 18 40 1.1E-20 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 APY29_RS10170 235d2a876153031b7891187b72f9c34b 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 199 211 1.1E-20 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 APY29_RS10170 235d2a876153031b7891187b72f9c34b 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 157 183 1.1E-20 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 APY29_RS10170 235d2a876153031b7891187b72f9c34b 277 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 82 95 - T 28-03-2018 IPR020583 Inositol monophosphatase, metal-binding site APY29_RS10170 235d2a876153031b7891187b72f9c34b 277 Pfam PF00459 Inositol monophosphatase family 4 253 9.8E-64 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 APY29_RS10170 235d2a876153031b7891187b72f9c34b 277 Gene3D G3DSA:3.30.540.10 3 146 1.6E-44 T 28-03-2018 APY29_RS10170 235d2a876153031b7891187b72f9c34b 277 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 212 226 - T 28-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 APY29_RS14980 fcc133cb0fb78340366850d049e3f2d1 372 SUPERFAMILY SSF56645 1 232 1.57E-68 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APY29_RS14980 fcc133cb0fb78340366850d049e3f2d1 372 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 114 126 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APY29_RS14980 fcc133cb0fb78340366850d049e3f2d1 372 PIRSF PIRSF016578 205 359 3.2E-11 T 28-03-2018 APY29_RS14980 fcc133cb0fb78340366850d049e3f2d1 372 PIRSF PIRSF016578 2 103 1.5E-7 T 28-03-2018 APY29_RS14980 fcc133cb0fb78340366850d049e3f2d1 372 PIRSF PIRSF016578 116 186 0.0064 T 28-03-2018 APY29_RS14980 fcc133cb0fb78340366850d049e3f2d1 372 SUPERFAMILY SSF47203 219 370 1.35E-57 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APY29_RS14980 fcc133cb0fb78340366850d049e3f2d1 372 Gene3D G3DSA:1.10.540.10 1 112 1.3E-27 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 APY29_RS14980 fcc133cb0fb78340366850d049e3f2d1 372 Gene3D G3DSA:1.20.140.10 218 372 7.2E-55 T 28-03-2018 APY29_RS14980 fcc133cb0fb78340366850d049e3f2d1 372 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 112 207 6.5E-26 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 APY29_RS14980 fcc133cb0fb78340366850d049e3f2d1 372 Gene3D G3DSA:2.40.110.10 113 217 3.2E-34 T 28-03-2018 APY29_RS14980 fcc133cb0fb78340366850d049e3f2d1 372 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 220 367 3.8E-49 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APY29_RS14980 fcc133cb0fb78340366850d049e3f2d1 372 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 1 107 7.5E-28 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 APY29_RS14980 fcc133cb0fb78340366850d049e3f2d1 372 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 327 346 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APY29_RS19565 6d92bf31b2422f21e1d9eb4d822d5356 603 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 592 1.5E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS19565 6d92bf31b2422f21e1d9eb4d822d5356 603 SMART SM00388 368 436 6.9E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS19565 6d92bf31b2422f21e1d9eb4d822d5356 603 Pfam PF13188 PAS domain 225 265 5.1E-6 T 28-03-2018 IPR000014 PAS domain APY29_RS19565 6d92bf31b2422f21e1d9eb4d822d5356 603 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 228 346 7.9E-7 T 28-03-2018 IPR000014 PAS domain APY29_RS19565 6d92bf31b2422f21e1d9eb4d822d5356 603 SUPERFAMILY SSF55874 425 592 1.01E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS19565 6d92bf31b2422f21e1d9eb4d822d5356 603 Gene3D G3DSA:3.30.565.10 432 593 1.1E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS19565 6d92bf31b2422f21e1d9eb4d822d5356 603 Pfam PF00512 His Kinase A (phospho-acceptor) domain 370 436 3.2E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS19565 6d92bf31b2422f21e1d9eb4d822d5356 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 572 1.3E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS19565 6d92bf31b2422f21e1d9eb4d822d5356 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 591 1.3E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS19565 6d92bf31b2422f21e1d9eb4d822d5356 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 535 1.3E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS19565 6d92bf31b2422f21e1d9eb4d822d5356 603 Pfam PF05227 CHASE3 domain 43 175 8.1E-18 T 28-03-2018 IPR007891 CHASE3 APY29_RS19565 6d92bf31b2422f21e1d9eb4d822d5356 603 Gene3D G3DSA:1.10.287.130 364 431 2.2E-14 T 28-03-2018 APY29_RS19565 6d92bf31b2422f21e1d9eb4d822d5356 603 Gene3D G3DSA:3.30.450.20 196 363 1.9E-16 T 28-03-2018 APY29_RS19565 6d92bf31b2422f21e1d9eb4d822d5356 603 SMART SM00387 481 594 4.0E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS19565 6d92bf31b2422f21e1d9eb4d822d5356 603 SUPERFAMILY SSF47384 353 436 7.85E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS19565 6d92bf31b2422f21e1d9eb4d822d5356 603 SUPERFAMILY SSF55785 209 339 3.14E-13 T 28-03-2018 IPR000014 PAS domain APY29_RS04035 c7066192f2e18ce7f01c754ddeb4df48 747 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 172 1.4E-27 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS04035 c7066192f2e18ce7f01c754ddeb4df48 747 Gene3D G3DSA:2.40.170.20 184 747 1.7E-78 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS04035 c7066192f2e18ce7f01c754ddeb4df48 747 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 59 747 2.1E-72 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APY29_RS04035 c7066192f2e18ce7f01c754ddeb4df48 747 SUPERFAMILY SSF56935 43 747 1.44E-122 T 28-03-2018 APY29_RS04035 c7066192f2e18ce7f01c754ddeb4df48 747 Gene3D G3DSA:2.170.130.10 35 183 4.4E-34 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS04035 c7066192f2e18ce7f01c754ddeb4df48 747 Pfam PF00593 TonB dependent receptor 307 743 9.8E-62 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS04035 c7066192f2e18ce7f01c754ddeb4df48 747 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 730 747 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site APY29_RS17250 44685143ce68c943c58e34579d3b0770 287 SMART SM00244 19 184 1.1E-16 T 28-03-2018 IPR001107 Band 7 domain APY29_RS17250 44685143ce68c943c58e34579d3b0770 287 PIRSF PIRSF005651 1 287 7.8E-81 T 28-03-2018 IPR010200 HflC GO:0016021|GO:0052547 APY29_RS17250 44685143ce68c943c58e34579d3b0770 287 SUPERFAMILY SSF117892 51 190 9.02E-20 T 28-03-2018 IPR001107 Band 7 domain APY29_RS17250 44685143ce68c943c58e34579d3b0770 287 Pfam PF01145 SPFH domain / Band 7 family 23 201 8.0E-24 T 28-03-2018 IPR001107 Band 7 domain APY29_RS06465 38cc52746c6d74d7f31f11575eea29f8 182 PIRSF PIRSF005900 20 182 1.2E-46 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APY29_RS06465 38cc52746c6d74d7f31f11575eea29f8 182 ProSitePatterns PS00819 Dps protein family signature 2. 87 101 - T 28-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 APY29_RS06465 38cc52746c6d74d7f31f11575eea29f8 182 SUPERFAMILY SSF47240 28 182 2.22E-45 T 28-03-2018 IPR009078 Ferritin-like superfamily APY29_RS06465 38cc52746c6d74d7f31f11575eea29f8 182 ProSitePatterns PS00818 Dps protein family signature 1. 61 77 - T 28-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 APY29_RS06465 38cc52746c6d74d7f31f11575eea29f8 182 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 85 101 4.1E-12 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APY29_RS06465 38cc52746c6d74d7f31f11575eea29f8 182 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 61 77 4.1E-12 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APY29_RS06465 38cc52746c6d74d7f31f11575eea29f8 182 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 159 177 4.1E-12 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APY29_RS06465 38cc52746c6d74d7f31f11575eea29f8 182 Gene3D G3DSA:1.20.1260.10 20 182 4.3E-50 T 28-03-2018 IPR012347 Ferritin-related APY29_RS06465 38cc52746c6d74d7f31f11575eea29f8 182 Pfam PF00210 Ferritin-like domain 42 182 2.3E-29 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APY29_RS14700 fe9cba6c98ea2fa06f82f3bca15e5d6b 237 SMART SM00448 4 117 6.9E-14 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS14700 fe9cba6c98ea2fa06f82f3bca15e5d6b 237 Gene3D G3DSA:3.40.50.2300 3 128 2.4E-27 T 28-03-2018 APY29_RS14700 fe9cba6c98ea2fa06f82f3bca15e5d6b 237 Gene3D G3DSA:1.10.10.10 129 216 3.9E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS14700 fe9cba6c98ea2fa06f82f3bca15e5d6b 237 SUPERFAMILY SSF46894 139 211 6.46E-21 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS14700 fe9cba6c98ea2fa06f82f3bca15e5d6b 237 Pfam PF00072 Response regulator receiver domain 6 117 1.2E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS14700 fe9cba6c98ea2fa06f82f3bca15e5d6b 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 3.3E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS14700 fe9cba6c98ea2fa06f82f3bca15e5d6b 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 3.3E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS14700 fe9cba6c98ea2fa06f82f3bca15e5d6b 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 3.3E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS14700 fe9cba6c98ea2fa06f82f3bca15e5d6b 237 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 2.6E-17 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS14700 fe9cba6c98ea2fa06f82f3bca15e5d6b 237 SMART SM00421 149 206 9.7E-17 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS14700 fe9cba6c98ea2fa06f82f3bca15e5d6b 237 SUPERFAMILY SSF52172 2 133 2.28E-24 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS19370 d58cd726710863e2d9ddd737a1460875 245 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 2 230 4.4E-10 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS19370 d58cd726710863e2d9ddd737a1460875 245 Gene3D G3DSA:3.60.10.10 1 238 3.8E-26 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS19370 d58cd726710863e2d9ddd737a1460875 245 SUPERFAMILY SSF56219 1 241 3.53E-30 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS15315 67d258a03710276823aa551cb900b287 243 Gene3D G3DSA:3.40.50.720 1 206 1.5E-60 T 28-03-2018 APY29_RS15315 67d258a03710276823aa551cb900b287 243 SUPERFAMILY SSF51735 5 243 2.16E-60 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS15315 67d258a03710276823aa551cb900b287 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.1E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS15315 67d258a03710276823aa551cb900b287 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.1E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS15315 67d258a03710276823aa551cb900b287 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 4.1E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS15315 67d258a03710276823aa551cb900b287 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.3E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS15315 67d258a03710276823aa551cb900b287 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.3E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS15315 67d258a03710276823aa551cb900b287 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.3E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS15315 67d258a03710276823aa551cb900b287 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.3E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS15315 67d258a03710276823aa551cb900b287 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.3E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS15315 67d258a03710276823aa551cb900b287 243 Pfam PF00106 short chain dehydrogenase 5 205 1.2E-49 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS11475 0895f0fcc03c7e39a2505feffe2ba236 77 Pfam PF11660 Protein of unknown function (DUF3262) 1 76 1.2E-25 T 28-03-2018 IPR021676 Protein of unknown function DUF3262 APY29_RS11475 0895f0fcc03c7e39a2505feffe2ba236 77 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 2 77 3.4E-32 T 28-03-2018 IPR021676 Protein of unknown function DUF3262 APY29_RS03395 96ba1944e0dd54fbcaf22e2b4f78c36d 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 184 6.8E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03395 96ba1944e0dd54fbcaf22e2b4f78c36d 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 213 6.8E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03395 96ba1944e0dd54fbcaf22e2b4f78c36d 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 232 6.8E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03395 96ba1944e0dd54fbcaf22e2b4f78c36d 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 249 269 6.8E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03395 96ba1944e0dd54fbcaf22e2b4f78c36d 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 133 6.8E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03395 96ba1944e0dd54fbcaf22e2b4f78c36d 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 46 63 6.8E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03395 96ba1944e0dd54fbcaf22e2b4f78c36d 288 Gene3D G3DSA:3.40.50.720 6 287 6.8E-74 T 28-03-2018 APY29_RS03395 96ba1944e0dd54fbcaf22e2b4f78c36d 288 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 54 284 1.7E-59 T 28-03-2018 APY29_RS03395 96ba1944e0dd54fbcaf22e2b4f78c36d 288 SUPERFAMILY SSF51735 43 285 1.96E-78 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS03395 96ba1944e0dd54fbcaf22e2b4f78c36d 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 133 4.9E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03395 96ba1944e0dd54fbcaf22e2b4f78c36d 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 182 4.9E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03395 96ba1944e0dd54fbcaf22e2b4f78c36d 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 194 213 4.9E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03395 96ba1944e0dd54fbcaf22e2b4f78c36d 288 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 181 209 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APY29_RS15650 c417403daeb97faea6a3a3c40744f1c9 265 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 28-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 APY29_RS15650 c417403daeb97faea6a3a3c40744f1c9 265 Gene3D G3DSA:3.40.50.10490 5 265 5.5E-92 T 28-03-2018 APY29_RS15650 c417403daeb97faea6a3a3c40744f1c9 265 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 40.936 T 28-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS15650 c417403daeb97faea6a3a3c40744f1c9 265 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 1.8E-100 T 28-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS15650 c417403daeb97faea6a3a3c40744f1c9 265 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.5E-36 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS15650 c417403daeb97faea6a3a3c40744f1c9 265 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.5E-36 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS15650 c417403daeb97faea6a3a3c40744f1c9 265 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.5E-36 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS15650 c417403daeb97faea6a3a3c40744f1c9 265 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.5E-36 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS15650 c417403daeb97faea6a3a3c40744f1c9 265 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.5E-36 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS15650 c417403daeb97faea6a3a3c40744f1c9 265 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.5E-36 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS15650 c417403daeb97faea6a3a3c40744f1c9 265 SUPERFAMILY SSF52313 6 229 5.62E-91 T 28-03-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain APY29_RS15650 c417403daeb97faea6a3a3c40744f1c9 265 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 28-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 APY29_RS15650 c417403daeb97faea6a3a3c40744f1c9 265 Pfam PF00318 Ribosomal protein S2 9 224 1.6E-92 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18410 5dec653f19d6bc1f0e500ca0b083c719 171 PIRSF PIRSF028470 1 162 2.9E-73 T 28-03-2018 IPR016887 Uncharacterised conserved protein UCP028470, steroid isomerase-related APY29_RS18410 5dec653f19d6bc1f0e500ca0b083c719 171 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 36 159 1.9E-41 T 28-03-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 APY29_RS18410 5dec653f19d6bc1f0e500ca0b083c719 171 Pfam PF08332 Calcium/calmodulin dependent protein kinase II association domain 36 159 8.9E-48 T 28-03-2018 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain GO:0004683|GO:0005516|GO:0006468 Reactome: R-HSA-3371571|Reactome: R-HSA-399719|Reactome: R-HSA-438066|Reactome: R-HSA-442729|Reactome: R-HSA-442742|Reactome: R-HSA-442982|Reactome: R-HSA-5576892|Reactome: R-HSA-5578775|Reactome: R-HSA-5673001|Reactome: R-HSA-877300|Reactome: R-HSA-936837 APY29_RS18410 5dec653f19d6bc1f0e500ca0b083c719 171 Gene3D G3DSA:3.10.450.50 20 171 2.0E-31 T 28-03-2018 APY29_RS18410 5dec653f19d6bc1f0e500ca0b083c719 171 SUPERFAMILY SSF54427 36 158 2.73E-32 T 28-03-2018 IPR032710 NTF2-like domain APY29_RS18320 4c9ab2be53ae6753682282ca0e2ae5df 199 Gene3D G3DSA:1.10.10.60 1 40 2.8E-8 T 28-03-2018 APY29_RS18320 4c9ab2be53ae6753682282ca0e2ae5df 199 Gene3D G3DSA:1.10.260.40 41 71 1.2E-8 T 28-03-2018 APY29_RS18320 4c9ab2be53ae6753682282ca0e2ae5df 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 64 2.3E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS18320 4c9ab2be53ae6753682282ca0e2ae5df 199 SUPERFAMILY SSF48498 86 196 2.67E-18 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APY29_RS18320 4c9ab2be53ae6753682282ca0e2ae5df 199 Pfam PF13305 WHG domain 92 176 6.7E-14 T 28-03-2018 IPR025996 WHG domain APY29_RS18320 4c9ab2be53ae6753682282ca0e2ae5df 199 Gene3D G3DSA:1.10.357.10 72 198 2.9E-18 T 28-03-2018 APY29_RS18320 4c9ab2be53ae6753682282ca0e2ae5df 199 SUPERFAMILY SSF46689 10 79 5.64E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS03505 5526b3a2e5ab120fa695e29cba5c1f62 258 Pfam PF04397 LytTr DNA-binding domain 163 257 1.1E-20 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 APY29_RS03505 5526b3a2e5ab120fa695e29cba5c1f62 258 SMART SM00448 4 116 3.6E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS03505 5526b3a2e5ab120fa695e29cba5c1f62 258 Gene3D G3DSA:3.40.50.2300 3 146 1.1E-33 T 28-03-2018 APY29_RS03505 5526b3a2e5ab120fa695e29cba5c1f62 258 Pfam PF00072 Response regulator receiver domain 7 114 1.7E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS03505 5526b3a2e5ab120fa695e29cba5c1f62 258 SMART SM00850 162 258 6.2E-22 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 APY29_RS03505 5526b3a2e5ab120fa695e29cba5c1f62 258 Gene3D G3DSA:2.40.50.40 154 221 4.8E-15 T 28-03-2018 APY29_RS03505 5526b3a2e5ab120fa695e29cba5c1f62 258 SUPERFAMILY SSF52172 1 152 5.55E-34 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS02065 812eb1de62906ba79faaa73ce0d4d0bb 471 SMART SM00387 358 471 7.0E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS02065 812eb1de62906ba79faaa73ce0d4d0bb 471 Gene3D G3DSA:3.30.565.10 319 470 4.0E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS02065 812eb1de62906ba79faaa73ce0d4d0bb 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 469 5.5E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS02065 812eb1de62906ba79faaa73ce0d4d0bb 471 SMART SM00388 256 313 0.0079 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS02065 812eb1de62906ba79faaa73ce0d4d0bb 471 SUPERFAMILY SSF47384 239 304 1.47E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS02065 812eb1de62906ba79faaa73ce0d4d0bb 471 Gene3D G3DSA:1.10.287.130 246 308 8.6E-4 T 28-03-2018 APY29_RS02065 812eb1de62906ba79faaa73ce0d4d0bb 471 SUPERFAMILY SSF55874 306 468 1.96E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS02065 812eb1de62906ba79faaa73ce0d4d0bb 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 2.8E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS02065 812eb1de62906ba79faaa73ce0d4d0bb 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 2.8E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS02065 812eb1de62906ba79faaa73ce0d4d0bb 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 448 2.8E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS18650 f0d9ada5a9007e2be852809e3f58d7c1 486 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 13 442 4.3E-153 T 28-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 APY29_RS18650 f0d9ada5a9007e2be852809e3f58d7c1 486 PIRSF PIRSF000337 7 455 1.4E-131 T 28-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 APY29_RS18650 f0d9ada5a9007e2be852809e3f58d7c1 486 Gene3D G3DSA:3.20.20.30 6 467 1.5E-101 T 28-03-2018 APY29_RS18650 f0d9ada5a9007e2be852809e3f58d7c1 486 Pfam PF00296 Luciferase-like monooxygenase 25 339 4.0E-56 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APY29_RS18650 f0d9ada5a9007e2be852809e3f58d7c1 486 SUPERFAMILY SSF51679 7 446 2.36E-114 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APY29_RS21540 87838594a8d8cbad4ba92c0b8d75b035 227 Gene3D G3DSA:3.40.50.2300 2 124 3.7E-34 T 28-03-2018 APY29_RS21540 87838594a8d8cbad4ba92c0b8d75b035 227 SUPERFAMILY SSF52172 9 128 3.7E-39 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS21540 87838594a8d8cbad4ba92c0b8d75b035 227 Pfam PF00072 Response regulator receiver domain 10 118 3.0E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS21540 87838594a8d8cbad4ba92c0b8d75b035 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 2.7E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS21540 87838594a8d8cbad4ba92c0b8d75b035 227 SMART SM00862 150 225 3.3E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS21540 87838594a8d8cbad4ba92c0b8d75b035 227 SUPERFAMILY SSF46894 124 226 5.95E-26 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS21540 87838594a8d8cbad4ba92c0b8d75b035 227 Gene3D G3DSA:1.10.10.10 125 227 2.8E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS21540 87838594a8d8cbad4ba92c0b8d75b035 227 SMART SM00448 8 118 1.4E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS21350 5bb07a86765bc914ce6c2f8301fa4eb2 295 SUPERFAMILY SSF46689 247 292 1.57E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS21350 5bb07a86765bc914ce6c2f8301fa4eb2 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 276 5.7E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APY29_RS21350 5bb07a86765bc914ce6c2f8301fa4eb2 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 276 292 5.7E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APY29_RS21350 5bb07a86765bc914ce6c2f8301fa4eb2 295 Gene3D G3DSA:2.60.120.280 18 177 2.1E-15 T 28-03-2018 APY29_RS21350 5bb07a86765bc914ce6c2f8301fa4eb2 295 Gene3D G3DSA:1.10.10.60 247 294 6.4E-12 T 28-03-2018 APY29_RS21350 5bb07a86765bc914ce6c2f8301fa4eb2 295 Pfam PF02311 AraC-like ligand binding domain 34 166 2.0E-12 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APY29_RS21350 5bb07a86765bc914ce6c2f8301fa4eb2 295 Gene3D G3DSA:1.10.10.60 191 245 3.8E-6 T 28-03-2018 APY29_RS21350 5bb07a86765bc914ce6c2f8301fa4eb2 295 SMART SM00342 209 292 4.2E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS21350 5bb07a86765bc914ce6c2f8301fa4eb2 295 SUPERFAMILY SSF51215 39 172 7.06E-12 T 28-03-2018 APY29_RS21350 5bb07a86765bc914ce6c2f8301fa4eb2 295 Pfam PF12833 Helix-turn-helix domain 215 292 2.2E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS07080 abbf466710f66678c85770739c802eb5 144 Pfam PF09278 MerR, DNA binding 47 112 2.1E-17 T 28-03-2018 IPR015358 Transcription regulator MerR, DNA binding APY29_RS07080 abbf466710f66678c85770739c802eb5 144 SUPERFAMILY SSF46955 5 125 3.48E-29 T 28-03-2018 IPR009061 Putative DNA-binding domain APY29_RS07080 abbf466710f66678c85770739c802eb5 144 SMART SM00422 5 73 1.7E-24 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APY29_RS07080 abbf466710f66678c85770739c802eb5 144 Pfam PF00376 MerR family regulatory protein 6 42 2.0E-14 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APY29_RS07080 abbf466710f66678c85770739c802eb5 144 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 4 139 4.5E-67 T 28-03-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 APY29_RS07080 abbf466710f66678c85770739c802eb5 144 Gene3D G3DSA:1.10.1660.10 60 132 7.6E-12 T 28-03-2018 APY29_RS07080 abbf466710f66678c85770739c802eb5 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 1.7E-13 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APY29_RS07080 abbf466710f66678c85770739c802eb5 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 6 17 1.7E-13 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APY29_RS07080 abbf466710f66678c85770739c802eb5 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 30 1.7E-13 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APY29_RS07080 abbf466710f66678c85770739c802eb5 144 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APY29_RS07080 abbf466710f66678c85770739c802eb5 144 Gene3D G3DSA:1.10.1660.10 1 59 2.5E-18 T 28-03-2018 APY29_RS07635 b4ad400fd6e1257e9bf816c7bbeb31ca 332 Gene3D G3DSA:1.10.600.10 12 332 1.3E-100 T 28-03-2018 IPR008949 Isoprenoid synthase domain APY29_RS07635 b4ad400fd6e1257e9bf816c7bbeb31ca 332 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 91 105 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site APY29_RS07635 b4ad400fd6e1257e9bf816c7bbeb31ca 332 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site APY29_RS07635 b4ad400fd6e1257e9bf816c7bbeb31ca 332 SUPERFAMILY SSF48576 15 331 2.02E-98 T 28-03-2018 IPR008949 Isoprenoid synthase domain APY29_RS07635 b4ad400fd6e1257e9bf816c7bbeb31ca 332 Pfam PF00348 Polyprenyl synthetase 41 273 3.3E-76 T 28-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 APY29_RS01385 386badfa2577dc2809634ad7185118fc 264 PIRSF PIRSF029288 1 264 6.3E-101 T 28-03-2018 IPR009211 Predicted virulence protein, SciE type APY29_RS01385 386badfa2577dc2809634ad7185118fc 264 Gene3D G3DSA:1.25.40.10 3 87 1.7E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS01385 386badfa2577dc2809634ad7185118fc 264 SUPERFAMILY SSF144059 4 263 2.22E-86 T 28-03-2018 APY29_RS01385 386badfa2577dc2809634ad7185118fc 264 Gene3D G3DSA:1.25.40.10 92 226 0.11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS01385 386badfa2577dc2809634ad7185118fc 264 Pfam PF07024 ImpE protein 140 259 4.8E-39 T 28-03-2018 IPR009211 Predicted virulence protein, SciE type APY29_RS06385 53a77b47edfdef7f02c90831962f9867 227 Pfam PF13394 4Fe-4S single cluster domain 39 121 2.0E-10 T 28-03-2018 APY29_RS06385 53a77b47edfdef7f02c90831962f9867 227 Pfam PF04055 Radical SAM superfamily 41 126 3.7E-14 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 APY29_RS06385 53a77b47edfdef7f02c90831962f9867 227 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 18 227 3.7E-111 T 28-03-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE APY29_RS06385 53a77b47edfdef7f02c90831962f9867 227 SUPERFAMILY SSF102114 42 117 1.05E-14 T 28-03-2018 APY29_RS06385 53a77b47edfdef7f02c90831962f9867 227 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 18 224 36.838 T 28-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 APY29_RS06385 53a77b47edfdef7f02c90831962f9867 227 Gene3D G3DSA:3.20.20.70 38 205 1.6E-17 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS06385 53a77b47edfdef7f02c90831962f9867 227 PIRSF PIRSF000370 16 227 4.8E-69 T 28-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 APY29_RS13295 4f0e39a976ae45ac24d05da72945eb10 209 SUPERFAMILY SSF49265 1 116 5.72E-9 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 APY29_RS13295 4f0e39a976ae45ac24d05da72945eb10 209 Gene3D G3DSA:2.60.40.10 113 208 7.9E-7 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS13295 4f0e39a976ae45ac24d05da72945eb10 209 SUPERFAMILY SSF49265 90 208 1.46E-5 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 APY29_RS13295 4f0e39a976ae45ac24d05da72945eb10 209 Gene3D G3DSA:2.60.40.10 1 30 0.028 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS13295 4f0e39a976ae45ac24d05da72945eb10 209 Gene3D G3DSA:2.60.40.10 31 112 1.9E-9 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS08105 55074fb1bba1d382a28951a87ac2424a 277 Pfam PF01904 Protein of unknown function DUF72 33 272 7.2E-52 T 28-03-2018 IPR002763 Protein of unknown function DUF72 APY29_RS08105 55074fb1bba1d382a28951a87ac2424a 277 SUPERFAMILY SSF117396 15 274 2.62E-63 T 28-03-2018 IPR002763 Protein of unknown function DUF72 APY29_RS08105 55074fb1bba1d382a28951a87ac2424a 277 Gene3D G3DSA:3.20.20.410 5 277 3.6E-69 T 28-03-2018 IPR002763 Protein of unknown function DUF72 APY29_RS20430 b9733fd423cd92d63e71952852fb885c 129 Pfam PF05635 23S rRNA-intervening sequence protein 12 116 1.9E-35 T 28-03-2018 IPR012657 23S rRNA-intervening sequence protein APY29_RS20430 b9733fd423cd92d63e71952852fb885c 129 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 17 122 1.4E-35 T 28-03-2018 IPR012657 23S rRNA-intervening sequence protein APY29_RS20430 b9733fd423cd92d63e71952852fb885c 129 SUPERFAMILY SSF158446 10 123 2.62E-36 T 28-03-2018 IPR012657 23S rRNA-intervening sequence protein APY29_RS20430 b9733fd423cd92d63e71952852fb885c 129 Gene3D G3DSA:1.20.1440.60 1 128 9.0E-40 T 28-03-2018 IPR012657 23S rRNA-intervening sequence protein APY29_RS19240 6fb4a6e569c6723694635fa853e17ae8 161 SUPERFAMILY SSF55729 7 142 1.7E-25 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS19240 6fb4a6e569c6723694635fa853e17ae8 161 Pfam PF00583 Acetyltransferase (GNAT) family 51 136 4.3E-13 T 28-03-2018 IPR000182 GNAT domain GO:0008080 APY29_RS19240 6fb4a6e569c6723694635fa853e17ae8 161 Gene3D G3DSA:3.40.630.30 3 157 1.4E-23 T 28-03-2018 APY29_RS05165 f6b7cb4ca82efd5560eb5e801d1a48e4 429 Gene3D G3DSA:3.90.1150.10 1 187 2.9E-42 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS05165 f6b7cb4ca82efd5560eb5e801d1a48e4 429 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 426 4.4E-188 T 28-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 APY29_RS05165 f6b7cb4ca82efd5560eb5e801d1a48e4 429 Gene3D G3DSA:3.90.1150.10 314 429 2.9E-19 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS05165 f6b7cb4ca82efd5560eb5e801d1a48e4 429 SUPERFAMILY SSF53383 1 426 5.02E-129 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS05165 f6b7cb4ca82efd5560eb5e801d1a48e4 429 Gene3D G3DSA:3.40.640.10 188 313 2.2E-44 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS05165 f6b7cb4ca82efd5560eb5e801d1a48e4 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APY29_RS05165 f6b7cb4ca82efd5560eb5e801d1a48e4 429 Pfam PF00202 Aminotransferase class-III 35 397 1.0E-77 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APY29_RS05165 f6b7cb4ca82efd5560eb5e801d1a48e4 429 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 427 103.461 T 28-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 APY29_RS04965 c8717d51916b471e5ff7c22fa4d8e4d6 479 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 473 61.3 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 APY29_RS04965 c8717d51916b471e5ff7c22fa4d8e4d6 479 Gene3D G3DSA:3.30.499.10 311 479 1.7E-49 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS04965 c8717d51916b471e5ff7c22fa4d8e4d6 479 ProSitePatterns PS01244 Aconitase family signature 2. 406 419 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 APY29_RS04965 c8717d51916b471e5ff7c22fa4d8e4d6 479 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 APY29_RS04965 c8717d51916b471e5ff7c22fa4d8e4d6 479 SUPERFAMILY SSF53732 3 474 1.57E-160 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS04965 c8717d51916b471e5ff7c22fa4d8e4d6 479 Gene3D G3DSA:3.40.1060.10 160 294 7.0E-42 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS04965 c8717d51916b471e5ff7c22fa4d8e4d6 479 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 472 3.3E-231 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 APY29_RS04965 c8717d51916b471e5ff7c22fa4d8e4d6 479 Gene3D G3DSA:3.30.499.10 1 159 6.0E-37 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS04965 c8717d51916b471e5ff7c22fa4d8e4d6 479 Pfam PF00330 Aconitase family (aconitate hydratase) 8 464 4.7E-157 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS04965 c8717d51916b471e5ff7c22fa4d8e4d6 479 PRINTS PR00415 Aconitase family signature 88 101 1.5E-47 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS04965 c8717d51916b471e5ff7c22fa4d8e4d6 479 PRINTS PR00415 Aconitase family signature 114 122 1.5E-47 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS04965 c8717d51916b471e5ff7c22fa4d8e4d6 479 PRINTS PR00415 Aconitase family signature 201 214 1.5E-47 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS04965 c8717d51916b471e5ff7c22fa4d8e4d6 479 PRINTS PR00415 Aconitase family signature 125 138 1.5E-47 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS04965 c8717d51916b471e5ff7c22fa4d8e4d6 479 PRINTS PR00415 Aconitase family signature 292 306 1.5E-47 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS04965 c8717d51916b471e5ff7c22fa4d8e4d6 479 PRINTS PR00415 Aconitase family signature 139 154 1.5E-47 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS04965 c8717d51916b471e5ff7c22fa4d8e4d6 479 PRINTS PR00415 Aconitase family signature 349 360 1.5E-47 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS04965 c8717d51916b471e5ff7c22fa4d8e4d6 479 PRINTS PR00415 Aconitase family signature 406 419 1.5E-47 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS04965 c8717d51916b471e5ff7c22fa4d8e4d6 479 PRINTS PR00415 Aconitase family signature 215 228 1.5E-47 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS20985 ceaaa2ceb94b9f6ff755fb56d0206134 743 SMART SM00642 265 610 1.6E-6 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS20985 ceaaa2ceb94b9f6ff755fb56d0206134 743 SUPERFAMILY SSF81296 38 125 1.04E-9 T 28-03-2018 IPR014756 Immunoglobulin E-set APY29_RS20985 ceaaa2ceb94b9f6ff755fb56d0206134 743 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 132 739 5.4E-259 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 APY29_RS20985 ceaaa2ceb94b9f6ff755fb56d0206134 743 SUPERFAMILY SSF51445 195 634 2.26E-107 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS20985 ceaaa2ceb94b9f6ff755fb56d0206134 743 Gene3D G3DSA:2.60.40.10 21 128 3.5E-9 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS20985 ceaaa2ceb94b9f6ff755fb56d0206134 743 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 643 741 1.3E-23 T 28-03-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 APY29_RS20985 ceaaa2ceb94b9f6ff755fb56d0206134 743 SUPERFAMILY SSF51011 639 742 3.12E-33 T 28-03-2018 APY29_RS20985 ceaaa2ceb94b9f6ff755fb56d0206134 743 Gene3D G3DSA:2.60.40.10 134 256 4.6E-31 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS20985 ceaaa2ceb94b9f6ff755fb56d0206134 743 Pfam PF00128 Alpha amylase, catalytic domain 290 363 2.3E-6 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS20985 ceaaa2ceb94b9f6ff755fb56d0206134 743 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 141 222 1.0E-21 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 APY29_RS20985 ceaaa2ceb94b9f6ff755fb56d0206134 743 Gene3D G3DSA:3.20.20.80 257 648 2.7E-75 T 28-03-2018 APY29_RS20985 ceaaa2ceb94b9f6ff755fb56d0206134 743 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 117 742 42.384 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 APY29_RS20985 ceaaa2ceb94b9f6ff755fb56d0206134 743 PIRSF PIRSF000463 25 743 1.9E-270 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 APY29_RS20985 ceaaa2ceb94b9f6ff755fb56d0206134 743 Gene3D G3DSA:2.60.40.1180 649 742 1.9E-32 T 28-03-2018 APY29_RS16510 04ff3bf0e761b58b869bcffe24f2aeb0 463 SUPERFAMILY SSF54211 309 461 4.93E-42 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS16510 04ff3bf0e761b58b869bcffe24f2aeb0 463 SUPERFAMILY SSF54211 261 275 4.93E-42 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS16510 04ff3bf0e761b58b869bcffe24f2aeb0 463 SMART SM00382 97 250 7.4E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS16510 04ff3bf0e761b58b869bcffe24f2aeb0 463 Hamap MF_01498 DNA repair protein RadA [radA]. 21 462 43.498 T 28-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 APY29_RS16510 04ff3bf0e761b58b869bcffe24f2aeb0 463 SUPERFAMILY SSF52540 74 297 3.59E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS16510 04ff3bf0e761b58b869bcffe24f2aeb0 463 Gene3D G3DSA:3.40.50.300 58 253 7.1E-19 T 28-03-2018 APY29_RS16510 04ff3bf0e761b58b869bcffe24f2aeb0 463 Gene3D G3DSA:3.30.230.10 254 463 1.7E-46 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APY29_RS16510 04ff3bf0e761b58b869bcffe24f2aeb0 463 Pfam PF13541 Subunit ChlI of Mg-chelatase 353 436 3.2E-10 T 28-03-2018 APY29_RS16510 04ff3bf0e761b58b869bcffe24f2aeb0 463 Pfam PF13481 AAA domain 91 228 1.3E-12 T 28-03-2018 APY29_RS16510 04ff3bf0e761b58b869bcffe24f2aeb0 463 PRINTS PR01874 DNA repair protein radA signature 89 117 3.5E-92 T 28-03-2018 APY29_RS16510 04ff3bf0e761b58b869bcffe24f2aeb0 463 PRINTS PR01874 DNA repair protein radA signature 180 204 3.5E-92 T 28-03-2018 APY29_RS16510 04ff3bf0e761b58b869bcffe24f2aeb0 463 PRINTS PR01874 DNA repair protein radA signature 10 34 3.5E-92 T 28-03-2018 APY29_RS16510 04ff3bf0e761b58b869bcffe24f2aeb0 463 PRINTS PR01874 DNA repair protein radA signature 219 247 3.5E-92 T 28-03-2018 APY29_RS16510 04ff3bf0e761b58b869bcffe24f2aeb0 463 PRINTS PR01874 DNA repair protein radA signature 328 351 3.5E-92 T 28-03-2018 APY29_RS16510 04ff3bf0e761b58b869bcffe24f2aeb0 463 PRINTS PR01874 DNA repair protein radA signature 130 147 3.5E-92 T 28-03-2018 APY29_RS16510 04ff3bf0e761b58b869bcffe24f2aeb0 463 PRINTS PR01874 DNA repair protein radA signature 254 280 3.5E-92 T 28-03-2018 APY29_RS16510 04ff3bf0e761b58b869bcffe24f2aeb0 463 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 458 2.0E-192 T 28-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 APY29_RS15505 ef5f252c0f9831bca9c06aa04f7dd17a 202 SUPERFAMILY SSF144091 2 189 5.49E-34 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APY29_RS15505 ef5f252c0f9831bca9c06aa04f7dd17a 202 Gene3D G3DSA:1.20.1540.10 1 187 8.9E-36 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APY29_RS15505 ef5f252c0f9831bca9c06aa04f7dd17a 202 Pfam PF01694 Rhomboid family 35 186 1.9E-26 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APY29_RS19660 7733e7dae912019f09473d98f6a8ec97 401 SUPERFAMILY SSF56601 1 293 1.68E-81 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like APY29_RS19660 7733e7dae912019f09473d98f6a8ec97 401 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 47 273 7.6E-80 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 APY29_RS19660 7733e7dae912019f09473d98f6a8ec97 401 SMART SM00936 293 383 7.9E-34 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APY29_RS19660 7733e7dae912019f09473d98f6a8ec97 401 Gene3D G3DSA:2.60.410.10 293 383 4.7E-24 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APY29_RS19660 7733e7dae912019f09473d98f6a8ec97 401 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 293 383 3.8E-27 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APY29_RS19660 7733e7dae912019f09473d98f6a8ec97 401 Gene3D G3DSA:3.40.710.10 42 292 4.8E-47 T 28-03-2018 APY29_RS19660 7733e7dae912019f09473d98f6a8ec97 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 133 150 1.9E-16 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APY29_RS19660 7733e7dae912019f09473d98f6a8ec97 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 160 173 1.9E-16 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APY29_RS19660 7733e7dae912019f09473d98f6a8ec97 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 75 86 1.9E-16 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APY29_RS19660 7733e7dae912019f09473d98f6a8ec97 401 SUPERFAMILY SSF69189 293 385 1.18E-26 T 28-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APY29_RS17735 37a860db59744c5a3773d8c4377fdad7 488 Gene3D G3DSA:3.40.50.2020 294 426 1.2E-20 T 28-03-2018 APY29_RS17735 37a860db59744c5a3773d8c4377fdad7 488 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 462 45.013 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 APY29_RS17735 37a860db59744c5a3773d8c4377fdad7 488 Gene3D G3DSA:3.60.20.10 2 293 1.2E-71 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APY29_RS17735 37a860db59744c5a3773d8c4377fdad7 488 SUPERFAMILY SSF56235 2 255 1.37E-65 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APY29_RS17735 37a860db59744c5a3773d8c4377fdad7 488 Pfam PF13522 Glutamine amidotransferase domain 61 193 2.4E-15 T 28-03-2018 APY29_RS17735 37a860db59744c5a3773d8c4377fdad7 488 SUPERFAMILY SSF53271 248 473 1.48E-68 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like APY29_RS17735 37a860db59744c5a3773d8c4377fdad7 488 PIRSF PIRSF000485 1 476 6.2E-156 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 APY29_RS17735 37a860db59744c5a3773d8c4377fdad7 488 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 462 6.9E-161 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 APY29_RS01475 143f735829b5ac1267ace67cd6a6286e 839 Gene3D G3DSA:1.10.10.10 744 836 7.8E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS01475 143f735829b5ac1267ace67cd6a6286e 839 Gene3D G3DSA:1.10.10.10 676 743 4.5E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS01475 143f735829b5ac1267ace67cd6a6286e 839 SMART SM00220 91 368 4.7E-40 T 28-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 APY29_RS01475 143f735829b5ac1267ace67cd6a6286e 839 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 97 122 - T 28-03-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 APY29_RS01475 143f735829b5ac1267ace67cd6a6286e 839 Pfam PF13424 Tetratricopeptide repeat 685 735 1.1E-8 T 28-03-2018 APY29_RS01475 143f735829b5ac1267ace67cd6a6286e 839 Gene3D G3DSA:3.30.200.20 85 172 5.7E-16 T 28-03-2018 APY29_RS01475 143f735829b5ac1267ace67cd6a6286e 839 SUPERFAMILY SSF48452 685 799 2.39E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS01475 143f735829b5ac1267ace67cd6a6286e 839 Pfam PF00069 Protein kinase domain 93 299 1.0E-35 T 28-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 APY29_RS01475 143f735829b5ac1267ace67cd6a6286e 839 Gene3D G3DSA:1.10.510.10 173 465 6.3E-35 T 28-03-2018 APY29_RS01475 143f735829b5ac1267ace67cd6a6286e 839 SUPERFAMILY SSF56112 87 378 7.92E-56 T 28-03-2018 IPR011009 Protein kinase-like domain APY29_RS01475 143f735829b5ac1267ace67cd6a6286e 839 Gene3D G3DSA:1.25.40.10 466 675 1.8E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS01475 143f735829b5ac1267ace67cd6a6286e 839 SUPERFAMILY SSF48452 467 580 4.11E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS01475 143f735829b5ac1267ace67cd6a6286e 839 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 211 223 - T 28-03-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 APY29_RS03110 52d0d01167827a4ef11edc0828773173 377 SUPERFAMILY SSF142695 188 344 4.18E-48 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 APY29_RS03110 52d0d01167827a4ef11edc0828773173 377 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 173 369 38.208 T 28-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 APY29_RS03110 52d0d01167827a4ef11edc0828773173 377 Pfam PF00925 GTP cyclohydrolase II 180 342 4.5E-51 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 APY29_RS03110 52d0d01167827a4ef11edc0828773173 377 PIRSF PIRSF001259 23 377 3.8E-89 T 28-03-2018 APY29_RS21545 69dc3c07d78c37daa0c85cab4681890d 289 Gene3D G3DSA:3.40.50.170 98 289 1.9E-56 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APY29_RS21545 69dc3c07d78c37daa0c85cab4681890d 289 Pfam PF00551 Formyl transferase 94 270 5.2E-39 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APY29_RS21545 69dc3c07d78c37daa0c85cab4681890d 289 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 12 288 3.0E-100 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 APY29_RS21545 69dc3c07d78c37daa0c85cab4681890d 289 SUPERFAMILY SSF55021 7 92 3.33E-20 T 28-03-2018 APY29_RS21545 69dc3c07d78c37daa0c85cab4681890d 289 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 8 288 47.936 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 APY29_RS21545 69dc3c07d78c37daa0c85cab4681890d 289 Gene3D G3DSA:3.30.70.260 6 97 1.5E-28 T 28-03-2018 APY29_RS21545 69dc3c07d78c37daa0c85cab4681890d 289 PIRSF PIRSF036480 8 289 1.8E-109 T 28-03-2018 APY29_RS21545 69dc3c07d78c37daa0c85cab4681890d 289 Pfam PF01842 ACT domain 11 72 3.1E-7 T 28-03-2018 IPR002912 ACT domain APY29_RS21545 69dc3c07d78c37daa0c85cab4681890d 289 SUPERFAMILY SSF53328 94 289 9.68E-61 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APY29_RS21545 69dc3c07d78c37daa0c85cab4681890d 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 13 39 3.5E-50 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 APY29_RS21545 69dc3c07d78c37daa0c85cab4681890d 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 94 116 3.5E-50 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 APY29_RS21545 69dc3c07d78c37daa0c85cab4681890d 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 116 143 3.5E-50 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 APY29_RS21545 69dc3c07d78c37daa0c85cab4681890d 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 262 287 3.5E-50 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 APY29_RS21545 69dc3c07d78c37daa0c85cab4681890d 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 45 57 3.5E-50 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 APY29_RS21545 69dc3c07d78c37daa0c85cab4681890d 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 240 262 3.5E-50 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 APY29_RS02720 4575a3322e157cc1b7f64926d004b86a 582 Pfam PF01807 CHC2 zinc finger 5 100 9.6E-38 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APY29_RS02720 4575a3322e157cc1b7f64926d004b86a 582 TIGRFAM TIGR01391 dnaG: DNA primase 3 419 1.4E-137 T 28-03-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 APY29_RS02720 4575a3322e157cc1b7f64926d004b86a 582 PIRSF PIRSF002811 1 581 4.8E-136 T 28-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 APY29_RS02720 4575a3322e157cc1b7f64926d004b86a 582 Gene3D G3DSA:3.40.1360.20 257 374 2.7E-32 T 28-03-2018 APY29_RS02720 4575a3322e157cc1b7f64926d004b86a 582 SMART SM00766 451 576 4.3E-35 T 28-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 APY29_RS02720 4575a3322e157cc1b7f64926d004b86a 582 SMART SM00400 35 89 6.2E-32 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APY29_RS02720 4575a3322e157cc1b7f64926d004b86a 582 Gene3D G3DSA:1.20.50.20 375 419 3.4E-19 T 28-03-2018 APY29_RS02720 4575a3322e157cc1b7f64926d004b86a 582 Pfam PF13155 Toprim-like 264 349 1.1E-13 T 28-03-2018 APY29_RS02720 4575a3322e157cc1b7f64926d004b86a 582 SUPERFAMILY SSF56731 114 424 2.62E-104 T 28-03-2018 APY29_RS02720 4575a3322e157cc1b7f64926d004b86a 582 SUPERFAMILY SSF57783 1 99 1.36E-35 T 28-03-2018 APY29_RS02720 4575a3322e157cc1b7f64926d004b86a 582 SUPERFAMILY SSF117023 448 579 1.57E-34 T 28-03-2018 APY29_RS02720 4575a3322e157cc1b7f64926d004b86a 582 Gene3D G3DSA:1.10.860.10 428 581 1.5E-30 T 28-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal APY29_RS02720 4575a3322e157cc1b7f64926d004b86a 582 Pfam PF08275 DNA primase catalytic core, N-terminal domain 124 253 1.6E-37 T 28-03-2018 IPR013264 DNA primase, catalytic core, N-terminal APY29_RS02720 4575a3322e157cc1b7f64926d004b86a 582 Hamap MF_00974 DNA primase [dnaG]. 3 577 28.771 T 28-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 APY29_RS02720 4575a3322e157cc1b7f64926d004b86a 582 Pfam PF08278 DNA primase DnaG DnaB-binding 452 575 2.6E-26 T 28-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 APY29_RS02720 4575a3322e157cc1b7f64926d004b86a 582 Gene3D G3DSA:3.90.980.10 107 242 1.9E-40 T 28-03-2018 IPR013264 DNA primase, catalytic core, N-terminal APY29_RS02720 4575a3322e157cc1b7f64926d004b86a 582 Gene3D G3DSA:3.90.580.10 1 102 4.2E-33 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APY29_RS02720 4575a3322e157cc1b7f64926d004b86a 582 SMART SM00493 261 332 1.1E-20 T 28-03-2018 IPR006171 TOPRIM domain APY29_RS02720 4575a3322e157cc1b7f64926d004b86a 582 Pfam PF10410 DnaB-helicase binding domain of primase 371 424 6.7E-12 T 28-03-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 APY29_RS12520 c0799acd03ccea485c1272993719cf87 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APY29_RS12520 c0799acd03ccea485c1272993719cf87 210 SUPERFAMILY SSF48498 83 207 1.51E-29 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APY29_RS12520 c0799acd03ccea485c1272993719cf87 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 1.7E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS12520 c0799acd03ccea485c1272993719cf87 210 Gene3D G3DSA:1.10.10.60 2 48 1.7E-16 T 28-03-2018 APY29_RS12520 c0799acd03ccea485c1272993719cf87 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 7.3E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS12520 c0799acd03ccea485c1272993719cf87 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 7.3E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS12520 c0799acd03ccea485c1272993719cf87 210 SUPERFAMILY SSF46689 8 76 1.69E-18 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS12520 c0799acd03ccea485c1272993719cf87 210 Gene3D G3DSA:1.10.357.10 49 209 2.6E-31 T 28-03-2018 APY29_RS16150 381b67677ef799808a28bab670d4b1a7 299 Pfam PF01926 50S ribosome-binding GTPase 13 127 5.0E-23 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS16150 381b67677ef799808a28bab670d4b1a7 299 SUPERFAMILY SSF54814 184 299 2.75E-38 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 APY29_RS16150 381b67677ef799808a28bab670d4b1a7 299 Gene3D G3DSA:3.40.50.300 8 182 7.6E-33 T 28-03-2018 APY29_RS16150 381b67677ef799808a28bab670d4b1a7 299 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 13 33 1.3E-6 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS16150 381b67677ef799808a28bab670d4b1a7 299 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 62 77 1.3E-6 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS16150 381b67677ef799808a28bab670d4b1a7 299 Gene3D G3DSA:3.30.300.20 188 299 2.7E-38 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta APY29_RS16150 381b67677ef799808a28bab670d4b1a7 299 SUPERFAMILY SSF52540 13 207 2.18E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS16150 381b67677ef799808a28bab670d4b1a7 299 Hamap MF_00367 GTPase Era [era]. 8 298 34.384 T 28-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS16150 381b67677ef799808a28bab670d4b1a7 299 TIGRFAM TIGR00436 era: GTP-binding protein Era 12 281 7.4E-76 T 28-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS16150 381b67677ef799808a28bab670d4b1a7 299 Pfam PF07650 KH domain 211 286 9.4E-20 T 28-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS16150 381b67677ef799808a28bab670d4b1a7 299 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 169 1.2E-27 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 APY29_RS15545 17aa2be53306247ab7ee6238b8407152 146 Pfam PF01047 MarR family 41 94 1.6E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS15545 17aa2be53306247ab7ee6238b8407152 146 SMART SM00347 29 130 1.9E-15 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS15545 17aa2be53306247ab7ee6238b8407152 146 SUPERFAMILY SSF46785 10 145 9.64E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS15545 17aa2be53306247ab7ee6238b8407152 146 ProSitePatterns PS01117 MarR-type HTH domain signature. 69 103 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site APY29_RS15545 17aa2be53306247ab7ee6238b8407152 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 1.5E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS15545 17aa2be53306247ab7ee6238b8407152 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 1.5E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS15545 17aa2be53306247ab7ee6238b8407152 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 1.5E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS15545 17aa2be53306247ab7ee6238b8407152 146 Gene3D G3DSA:1.10.10.10 1 146 6.5E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS13570 1aa1540b1c251a8106017d4a549550f9 566 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 215 530 7.7E-103 T 28-03-2018 IPR005565 Haemolysin activator HlyB, C-terminal APY29_RS13570 1aa1540b1c251a8106017d4a549550f9 566 Pfam PF08479 POTRA domain, ShlB-type 79 156 1.2E-12 T 28-03-2018 IPR013686 Polypeptide-transport-associated, ShlB-type APY29_RS13570 1aa1540b1c251a8106017d4a549550f9 566 Gene3D G3DSA:2.40.160.50 184 566 2.5E-49 T 28-03-2018 APY29_RS13570 1aa1540b1c251a8106017d4a549550f9 566 Pfam PF17287 POTRA domain 158 210 1.5E-16 T 28-03-2018 IPR035251 ShlB, POTRA domain APY29_RS13570 1aa1540b1c251a8106017d4a549550f9 566 PIRSF PIRSF029745 3 566 2.3E-136 T 28-03-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 APY29_RS13570 1aa1540b1c251a8106017d4a549550f9 566 Gene3D G3DSA:3.10.20.310 91 156 1.4E-4 T 28-03-2018 APY29_RS22605 4d6530ad5748c04dab6a39a9b2ba1b71 654 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 281 373 2.1E-6 T 28-03-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APY29_RS22605 4d6530ad5748c04dab6a39a9b2ba1b71 654 SUPERFAMILY SSF52266 109 213 3.05E-69 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain APY29_RS22605 4d6530ad5748c04dab6a39a9b2ba1b71 654 SUPERFAMILY SSF52266 417 591 3.05E-69 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain APY29_RS22605 4d6530ad5748c04dab6a39a9b2ba1b71 654 SUPERFAMILY SSF49785 250 372 2.55E-16 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS22605 4d6530ad5748c04dab6a39a9b2ba1b71 654 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 396 538 2.0E-12 T 28-03-2018 IPR005181 Sialate O-acetylesterase domain APY29_RS22605 4d6530ad5748c04dab6a39a9b2ba1b71 654 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 111 212 2.5E-6 T 28-03-2018 IPR005181 Sialate O-acetylesterase domain APY29_RS22605 4d6530ad5748c04dab6a39a9b2ba1b71 654 Gene3D G3DSA:2.60.40.10 35 104 4.7E-5 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS22605 4d6530ad5748c04dab6a39a9b2ba1b71 654 Gene3D G3DSA:3.40.50.1110 109 543 4.6E-76 T 28-03-2018 APY29_RS05060 d99fc1a132f5ddd6b0abc3ecf45b8064 675 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 4 675 25.658 T 28-03-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 APY29_RS05060 d99fc1a132f5ddd6b0abc3ecf45b8064 675 Pfam PF03030 Inorganic H+ pyrophosphatase 15 670 6.6E-269 T 28-03-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 APY29_RS05060 d99fc1a132f5ddd6b0abc3ecf45b8064 675 PIRSF PIRSF001265 2 675 7.0E-265 T 28-03-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 APY29_RS05060 d99fc1a132f5ddd6b0abc3ecf45b8064 675 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 12 675 5.5E-267 T 28-03-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 APY29_RS20990 b963ee5074e66603933f711ff71497b5 527 Hamap MF_00484 Glycogen synthase [glgA]. 51 516 38.167 T 28-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 APY29_RS20990 b963ee5074e66603933f711ff71497b5 527 Gene3D G3DSA:3.40.50.2000 300 498 9.1E-39 T 28-03-2018 APY29_RS20990 b963ee5074e66603933f711ff71497b5 527 Pfam PF08323 Starch synthase catalytic domain 54 284 5.3E-62 T 28-03-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 APY29_RS20990 b963ee5074e66603933f711ff71497b5 527 SUPERFAMILY SSF53756 41 520 2.23E-100 T 28-03-2018 APY29_RS20990 b963ee5074e66603933f711ff71497b5 527 Pfam PF00534 Glycosyl transferases group 1 341 476 2.4E-13 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 APY29_RS20990 b963ee5074e66603933f711ff71497b5 527 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 54 515 1.2E-140 T 28-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 APY29_RS22555 5762ce34a4e47d4620de1cc643989e0c 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 5.0E-7 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS22555 5762ce34a4e47d4620de1cc643989e0c 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 110 123 5.0E-7 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS22555 5762ce34a4e47d4620de1cc643989e0c 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 5.0E-7 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS22555 5762ce34a4e47d4620de1cc643989e0c 286 Pfam PF00561 alpha/beta hydrolase fold 26 136 1.7E-20 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS22555 5762ce34a4e47d4620de1cc643989e0c 286 SUPERFAMILY SSF53474 21 282 2.03E-49 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS22555 5762ce34a4e47d4620de1cc643989e0c 286 Gene3D G3DSA:3.40.50.1820 11 279 2.1E-36 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS08280 9feab9c52f085a6736fbadaf69aae303 342 SUPERFAMILY SSF52540 2 209 1.88E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS08280 9feab9c52f085a6736fbadaf69aae303 342 Pfam PF06144 DNA polymerase III, delta subunit 20 189 3.8E-21 T 28-03-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 APY29_RS08280 9feab9c52f085a6736fbadaf69aae303 342 SUPERFAMILY SSF48019 211 333 2.21E-20 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 APY29_RS08280 9feab9c52f085a6736fbadaf69aae303 342 Gene3D G3DSA:3.40.50.300 1 137 1.5E-19 T 28-03-2018 APY29_RS08280 9feab9c52f085a6736fbadaf69aae303 342 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 332 2.2E-95 T 28-03-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 APY29_RS08280 9feab9c52f085a6736fbadaf69aae303 342 Gene3D G3DSA:1.10.8.60 143 219 1.8E-22 T 28-03-2018 APY29_RS08280 9feab9c52f085a6736fbadaf69aae303 342 Gene3D G3DSA:1.20.272.10 220 339 2.5E-17 T 28-03-2018 APY29_RS15985 4fa3fe42522b30821e524e51d7215946 88 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 39 63 - T 28-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site APY29_RS15985 4fa3fe42522b30821e524e51d7215946 88 SUPERFAMILY SSF57716 38 72 8.7E-9 T 28-03-2018 APY29_RS15985 4fa3fe42522b30821e524e51d7215946 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 35 68 5.9E-13 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 APY29_RS15985 4fa3fe42522b30821e524e51d7215946 88 PRINTS PR00618 DksA/TraR zinc finger signature 51 63 2.3E-5 T 28-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria APY29_RS15985 4fa3fe42522b30821e524e51d7215946 88 PRINTS PR00618 DksA/TraR zinc finger signature 39 50 2.3E-5 T 28-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria APY29_RS15985 4fa3fe42522b30821e524e51d7215946 88 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 12 66 2.5E-18 T 28-03-2018 IPR012783 Zinc finger, C4 DksA/TraR-type APY29_RS04955 e5ebe1fc95ae8a4a749d492258558057 1004 Pfam PF07494 Two component regulator propeller 477 499 0.0052 T 28-03-2018 IPR011110 Two component regulator propeller APY29_RS04955 e5ebe1fc95ae8a4a749d492258558057 1004 Pfam PF07494 Two component regulator propeller 61 83 0.01 T 28-03-2018 IPR011110 Two component regulator propeller APY29_RS04955 e5ebe1fc95ae8a4a749d492258558057 1004 Gene3D G3DSA:2.130.10.10 66 148 1.8E-8 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS04955 e5ebe1fc95ae8a4a749d492258558057 1004 Gene3D G3DSA:2.130.10.10 149 307 1.5E-15 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS04955 e5ebe1fc95ae8a4a749d492258558057 1004 Gene3D G3DSA:2.130.10.10 514 647 5.0E-7 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS04955 e5ebe1fc95ae8a4a749d492258558057 1004 Gene3D G3DSA:2.130.10.10 308 513 1.9E-23 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS04955 e5ebe1fc95ae8a4a749d492258558057 1004 Gene3D G3DSA:3.30.70.270 823 999 1.1E-47 T 28-03-2018 APY29_RS04955 e5ebe1fc95ae8a4a749d492258558057 1004 SUPERFAMILY SSF63829 116 294 9.16E-11 T 28-03-2018 APY29_RS04955 e5ebe1fc95ae8a4a749d492258558057 1004 SUPERFAMILY SSF55073 845 997 6.04E-39 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS04955 e5ebe1fc95ae8a4a749d492258558057 1004 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 836 997 4.4E-38 T 28-03-2018 IPR000160 GGDEF domain APY29_RS04955 e5ebe1fc95ae8a4a749d492258558057 1004 SUPERFAMILY SSF63829 311 546 5.23E-8 T 28-03-2018 APY29_RS04955 e5ebe1fc95ae8a4a749d492258558057 1004 Pfam PF00990 Diguanylate cyclase, GGDEF domain 840 996 1.5E-35 T 28-03-2018 IPR000160 GGDEF domain APY29_RS04955 e5ebe1fc95ae8a4a749d492258558057 1004 SMART SM00267 829 1000 4.8E-43 T 28-03-2018 IPR000160 GGDEF domain APY29_RS04955 e5ebe1fc95ae8a4a749d492258558057 1004 Pfam PF07495 Y_Y_Y domain 697 753 4.7E-17 T 28-03-2018 IPR011123 Two component regulator three Y APY29_RS18130 0b6bad785e32ff2fb3fac6f74523c117 396 Gene3D G3DSA:3.40.50.300 2 74 5.0E-11 T 28-03-2018 APY29_RS18130 0b6bad785e32ff2fb3fac6f74523c117 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site APY29_RS18130 0b6bad785e32ff2fb3fac6f74523c117 396 SUPERFAMILY SSF50447 207 303 1.53E-32 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain APY29_RS18130 0b6bad785e32ff2fb3fac6f74523c117 396 Gene3D G3DSA:2.40.30.10 302 395 5.8E-33 T 28-03-2018 APY29_RS18130 0b6bad785e32ff2fb3fac6f74523c117 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 4.7E-20 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 APY29_RS18130 0b6bad785e32ff2fb3fac6f74523c117 396 Gene3D G3DSA:2.40.30.10 208 301 9.1E-33 T 28-03-2018 APY29_RS18130 0b6bad785e32ff2fb3fac6f74523c117 396 Gene3D G3DSA:3.40.50.300 75 205 4.9E-27 T 28-03-2018 APY29_RS18130 0b6bad785e32ff2fb3fac6f74523c117 396 SUPERFAMILY SSF52540 6 221 2.12E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS18130 0b6bad785e32ff2fb3fac6f74523c117 396 SUPERFAMILY SSF50465 300 395 8.63E-36 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APY29_RS18130 0b6bad785e32ff2fb3fac6f74523c117 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 5.5E-14 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 APY29_RS18130 0b6bad785e32ff2fb3fac6f74523c117 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.099 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 APY29_RS18130 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS18130 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS18130 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS18130 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS18130 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS18130 0b6bad785e32ff2fb3fac6f74523c117 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 1.8E-226 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 APY29_RS18130 0b6bad785e32ff2fb3fac6f74523c117 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 3.9E-56 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS18130 0b6bad785e32ff2fb3fac6f74523c117 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.0E-33 T 28-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APY29_RS18065 0b6bad785e32ff2fb3fac6f74523c117 396 Gene3D G3DSA:3.40.50.300 2 74 5.0E-11 T 28-03-2018 APY29_RS18065 0b6bad785e32ff2fb3fac6f74523c117 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site APY29_RS18065 0b6bad785e32ff2fb3fac6f74523c117 396 SUPERFAMILY SSF50447 207 303 1.53E-32 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain APY29_RS18065 0b6bad785e32ff2fb3fac6f74523c117 396 Gene3D G3DSA:2.40.30.10 302 395 5.8E-33 T 28-03-2018 APY29_RS18065 0b6bad785e32ff2fb3fac6f74523c117 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 4.7E-20 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 APY29_RS18065 0b6bad785e32ff2fb3fac6f74523c117 396 Gene3D G3DSA:2.40.30.10 208 301 9.1E-33 T 28-03-2018 APY29_RS18065 0b6bad785e32ff2fb3fac6f74523c117 396 Gene3D G3DSA:3.40.50.300 75 205 4.9E-27 T 28-03-2018 APY29_RS18065 0b6bad785e32ff2fb3fac6f74523c117 396 SUPERFAMILY SSF52540 6 221 2.12E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS18065 0b6bad785e32ff2fb3fac6f74523c117 396 SUPERFAMILY SSF50465 300 395 8.63E-36 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APY29_RS18065 0b6bad785e32ff2fb3fac6f74523c117 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 5.5E-14 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 APY29_RS18065 0b6bad785e32ff2fb3fac6f74523c117 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.099 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 APY29_RS18065 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS18065 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS18065 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS18065 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS18065 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS18065 0b6bad785e32ff2fb3fac6f74523c117 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 1.8E-226 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 APY29_RS18065 0b6bad785e32ff2fb3fac6f74523c117 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 3.9E-56 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS18065 0b6bad785e32ff2fb3fac6f74523c117 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.0E-33 T 28-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APY29_RS10105 171f4bb5da02649c18f065f52a4cd505 393 Pfam PF03486 HI0933-like protein 5 391 1.1E-141 T 28-03-2018 APY29_RS10105 171f4bb5da02649c18f065f52a4cd505 393 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 390 1.6E-123 T 28-03-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like APY29_RS10105 171f4bb5da02649c18f065f52a4cd505 393 SUPERFAMILY SSF160996 191 339 1.16E-35 T 28-03-2018 APY29_RS10105 171f4bb5da02649c18f065f52a4cd505 393 Gene3D G3DSA:1.10.8.260 270 320 3.7E-14 T 28-03-2018 IPR023166 HI0933 insert-like domain APY29_RS10105 171f4bb5da02649c18f065f52a4cd505 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 2.0E-6 T 28-03-2018 APY29_RS10105 171f4bb5da02649c18f065f52a4cd505 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.0E-6 T 28-03-2018 APY29_RS10105 171f4bb5da02649c18f065f52a4cd505 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 346 368 2.0E-6 T 28-03-2018 APY29_RS10105 171f4bb5da02649c18f065f52a4cd505 393 SUPERFAMILY SSF51905 1 189 2.23E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS10105 171f4bb5da02649c18f065f52a4cd505 393 SUPERFAMILY SSF51905 336 391 2.23E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS10105 171f4bb5da02649c18f065f52a4cd505 393 Gene3D G3DSA:3.50.50.60 1 190 1.3E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS10105 171f4bb5da02649c18f065f52a4cd505 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 361 368 2.5E-9 T 28-03-2018 APY29_RS10105 171f4bb5da02649c18f065f52a4cd505 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.5E-9 T 28-03-2018 APY29_RS10105 171f4bb5da02649c18f065f52a4cd505 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 2.5E-9 T 28-03-2018 APY29_RS10105 171f4bb5da02649c18f065f52a4cd505 393 Gene3D G3DSA:2.40.30.10 191 269 2.6E-22 T 28-03-2018 APY29_RS20110 054370695148363c317a5d06b9a27971 259 Pfam PF01145 SPFH domain / Band 7 family 19 204 1.7E-18 T 28-03-2018 IPR001107 Band 7 domain APY29_RS20110 054370695148363c317a5d06b9a27971 259 SUPERFAMILY SSF117892 53 188 8.11E-10 T 28-03-2018 IPR001107 Band 7 domain APY29_RS16220 51315427cc02c78eed62b311958160e5 501 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 10 484 5.1E-221 T 28-03-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 APY29_RS16220 51315427cc02c78eed62b311958160e5 501 SUPERFAMILY SSF53720 5 487 1.02E-144 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APY29_RS16220 51315427cc02c78eed62b311958160e5 501 Pfam PF00171 Aldehyde dehydrogenase family 22 480 1.8E-142 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APY29_RS16220 51315427cc02c78eed62b311958160e5 501 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APY29_RS16220 51315427cc02c78eed62b311958160e5 501 Gene3D G3DSA:3.40.605.10 1 266 3.5E-86 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APY29_RS16220 51315427cc02c78eed62b311958160e5 501 Gene3D G3DSA:3.40.309.10 267 462 2.7E-59 T 28-03-2018 APY29_RS01515 4e6b37f048989447188ef9946da26096 1177 Gene3D G3DSA:3.40.50.300 136 401 1.2E-9 T 28-03-2018 APY29_RS01515 4e6b37f048989447188ef9946da26096 1177 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 17 1096 0.0 T 28-03-2018 IPR017731 Type VI secretion system, IcmF APY29_RS01515 4e6b37f048989447188ef9946da26096 1177 Pfam PF06761 Intracellular multiplication and human macrophage-killing 505 802 4.7E-59 T 28-03-2018 IPR009612 ImcF-related APY29_RS01515 4e6b37f048989447188ef9946da26096 1177 Pfam PF14331 ImcF-related N-terminal domain 194 451 1.3E-89 T 28-03-2018 IPR025743 ImcF-related, N-terminal domain APY29_RS01515 4e6b37f048989447188ef9946da26096 1177 Gene3D G3DSA:3.40.50.300 99 135 0.1 T 28-03-2018 APY29_RS01515 4e6b37f048989447188ef9946da26096 1177 SUPERFAMILY SSF52540 107 293 4.4E-14 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS01515 4e6b37f048989447188ef9946da26096 1177 Pfam PF06744 Type VI secretion protein IcmF C-terminal 930 1098 7.2E-37 T 28-03-2018 IPR010623 Type VI secretion system IcmF, C-terminal APY29_RS01590 4882a042b13946d85a7322105953172d 789 Pfam PF00326 Prolyl oligopeptidase family 592 788 5.1E-42 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APY29_RS01590 4882a042b13946d85a7322105953172d 789 SUPERFAMILY SSF53474 532 787 1.24E-60 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS01590 4882a042b13946d85a7322105953172d 789 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 339 500 4.0E-15 T 28-03-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 APY29_RS01590 4882a042b13946d85a7322105953172d 789 SUPERFAMILY SSF82171 220 289 1.44E-36 T 28-03-2018 APY29_RS01590 4882a042b13946d85a7322105953172d 789 SUPERFAMILY SSF82171 85 180 1.44E-36 T 28-03-2018 APY29_RS01590 4882a042b13946d85a7322105953172d 789 SUPERFAMILY SSF82171 323 531 1.44E-36 T 28-03-2018 APY29_RS01590 4882a042b13946d85a7322105953172d 789 Gene3D G3DSA:2.140.10.30 144 526 1.1E-49 T 28-03-2018 APY29_RS01590 4882a042b13946d85a7322105953172d 789 Gene3D G3DSA:2.140.10.30 17 143 1.3E-5 T 28-03-2018 APY29_RS01590 4882a042b13946d85a7322105953172d 789 Gene3D G3DSA:3.40.50.1820 527 789 1.6E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS14240 39f579c09b5230bc91903dd83d33cff8 370 Gene3D G3DSA:3.40.640.10 3 242 2.5E-47 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS14240 39f579c09b5230bc91903dd83d33cff8 370 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 362 2.2E-114 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APY29_RS14240 39f579c09b5230bc91903dd83d33cff8 370 SUPERFAMILY SSF53383 14 366 9.49E-99 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS14240 39f579c09b5230bc91903dd83d33cff8 370 PIRSF PIRSF000390 6 369 1.3E-97 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APY29_RS14240 39f579c09b5230bc91903dd83d33cff8 370 Gene3D G3DSA:3.90.1150.10 243 369 1.7E-36 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS22220 b75923cee58f850944611bf3ad7cd3bd 203 Pfam PF01161 Phosphatidylethanolamine-binding protein 26 196 1.6E-37 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein APY29_RS22220 b75923cee58f850944611bf3ad7cd3bd 203 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 28 195 4.0E-25 T 28-03-2018 IPR005247 YbhB/YbcL APY29_RS22220 b75923cee58f850944611bf3ad7cd3bd 203 Gene3D G3DSA:3.90.280.10 1 199 5.1E-49 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein APY29_RS22220 b75923cee58f850944611bf3ad7cd3bd 203 SUPERFAMILY SSF49777 1 198 2.09E-42 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein APY29_RS17030 7decf4b68a7bd953063f7b7ceccebdd5 201 TIGRFAM TIGR00498 lexA: repressor LexA 7 200 1.3E-50 T 28-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 APY29_RS17030 7decf4b68a7bd953063f7b7ceccebdd5 201 Gene3D G3DSA:1.10.10.10 4 92 4.6E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS17030 7decf4b68a7bd953063f7b7ceccebdd5 201 SUPERFAMILY SSF51306 78 199 5.76E-33 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C APY29_RS17030 7decf4b68a7bd953063f7b7ceccebdd5 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 114 124 1.4E-10 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APY29_RS17030 7decf4b68a7bd953063f7b7ceccebdd5 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 125 136 1.4E-10 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APY29_RS17030 7decf4b68a7bd953063f7b7ceccebdd5 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 153 165 1.4E-10 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APY29_RS17030 7decf4b68a7bd953063f7b7ceccebdd5 201 Gene3D G3DSA:2.10.109.10 93 200 2.9E-22 T 28-03-2018 APY29_RS17030 7decf4b68a7bd953063f7b7ceccebdd5 201 SUPERFAMILY SSF46785 3 68 1.19E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS17030 7decf4b68a7bd953063f7b7ceccebdd5 201 Hamap MF_00015 LexA repressor [lexA]. 3 201 27.711 T 28-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 APY29_RS17030 7decf4b68a7bd953063f7b7ceccebdd5 201 Pfam PF01726 LexA DNA binding domain 3 64 6.9E-12 T 28-03-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 APY29_RS17030 7decf4b68a7bd953063f7b7ceccebdd5 201 Pfam PF00717 Peptidase S24-like 117 182 2.6E-15 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C APY29_RS15035 8e9663b0623603da4777a2f5f6ea96a4 449 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 4.8E-39 T 28-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 APY29_RS15035 8e9663b0623603da4777a2f5f6ea96a4 449 PIRSF PIRSF000124 1 443 1.5E-153 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 APY29_RS15035 8e9663b0623603da4777a2f5f6ea96a4 449 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 424 1.8E-141 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 APY29_RS15035 8e9663b0623603da4777a2f5f6ea96a4 449 Gene3D G3DSA:3.40.50.720 1 202 1.6E-62 T 28-03-2018 APY29_RS15035 8e9663b0623603da4777a2f5f6ea96a4 449 Gene3D G3DSA:1.20.5.100 205 227 1.7E-14 T 28-03-2018 APY29_RS15035 8e9663b0623603da4777a2f5f6ea96a4 449 Gene3D G3DSA:3.40.50.720 228 440 6.3E-72 T 28-03-2018 APY29_RS15035 8e9663b0623603da4777a2f5f6ea96a4 449 SUPERFAMILY SSF51735 1 195 3.48E-60 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS15035 8e9663b0623603da4777a2f5f6ea96a4 449 SMART SM00984 324 428 6.5E-51 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 APY29_RS15035 8e9663b0623603da4777a2f5f6ea96a4 449 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 3.1E-69 T 28-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 APY29_RS15035 8e9663b0623603da4777a2f5f6ea96a4 449 SUPERFAMILY SSF52413 318 439 1.44E-38 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 APY29_RS15035 8e9663b0623603da4777a2f5f6ea96a4 449 PIRSF PIRSF500134 1 446 1.6E-189 T 28-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 APY29_RS15035 8e9663b0623603da4777a2f5f6ea96a4 449 SUPERFAMILY SSF48179 204 298 5.89E-34 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APY29_RS15035 8e9663b0623603da4777a2f5f6ea96a4 449 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 428 1.3E-32 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 APY29_RS18225 1e81422037b051f18719cee1bec70a0f 203 ProSitePatterns PS00194 Thioredoxin family active site. 93 111 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 APY29_RS18225 1e81422037b051f18719cee1bec70a0f 203 Pfam PF00578 AhpC/TSA family 68 181 8.5E-17 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 APY29_RS18225 1e81422037b051f18719cee1bec70a0f 203 SUPERFAMILY SSF52833 68 195 2.76E-33 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS18225 1e81422037b051f18719cee1bec70a0f 203 SUPERFAMILY SSF52833 7 34 2.76E-33 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS18225 1e81422037b051f18719cee1bec70a0f 203 Gene3D G3DSA:3.40.30.10 23 197 2.3E-29 T 28-03-2018 APY29_RS09255 9908e6e0ffc4638d9264a28896f9ac2a 597 Gene3D G3DSA:2.40.110.10 162 275 3.9E-22 T 28-03-2018 APY29_RS09255 9908e6e0ffc4638d9264a28896f9ac2a 597 SUPERFAMILY SSF47203 288 459 1.56E-47 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APY29_RS09255 9908e6e0ffc4638d9264a28896f9ac2a 597 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 272 3.5E-15 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 APY29_RS09255 9908e6e0ffc4638d9264a28896f9ac2a 597 SUPERFAMILY SSF56645 38 280 2.88E-52 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APY29_RS09255 9908e6e0ffc4638d9264a28896f9ac2a 597 Gene3D G3DSA:1.10.540.10 39 161 1.9E-12 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 APY29_RS09255 9908e6e0ffc4638d9264a28896f9ac2a 597 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 284 452 2.3E-23 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APY29_RS09255 9908e6e0ffc4638d9264a28896f9ac2a 597 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 589 5.4E-29 T 28-03-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain APY29_RS09255 9908e6e0ffc4638d9264a28896f9ac2a 597 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 5.5E-8 T 28-03-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria APY29_RS09255 9908e6e0ffc4638d9264a28896f9ac2a 597 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 158 1.7E-5 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 APY29_RS09255 9908e6e0ffc4638d9264a28896f9ac2a 597 Gene3D G3DSA:1.20.140.10 277 468 4.7E-42 T 28-03-2018 APY29_RS10085 03a3d1cffdc2b9b87e16b0525ebfd37a 246 Gene3D G3DSA:3.40.50.720 1 44 3.7E-10 T 28-03-2018 APY29_RS10085 03a3d1cffdc2b9b87e16b0525ebfd37a 246 Gene3D G3DSA:3.40.50.720 45 246 1.2E-63 T 28-03-2018 APY29_RS10085 03a3d1cffdc2b9b87e16b0525ebfd37a 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 183 3.8E-5 T 28-03-2018 APY29_RS10085 03a3d1cffdc2b9b87e16b0525ebfd37a 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APY29_RS10085 03a3d1cffdc2b9b87e16b0525ebfd37a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.5E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS10085 03a3d1cffdc2b9b87e16b0525ebfd37a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.5E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS10085 03a3d1cffdc2b9b87e16b0525ebfd37a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.5E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS10085 03a3d1cffdc2b9b87e16b0525ebfd37a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.0E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS10085 03a3d1cffdc2b9b87e16b0525ebfd37a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.0E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS10085 03a3d1cffdc2b9b87e16b0525ebfd37a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.0E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS10085 03a3d1cffdc2b9b87e16b0525ebfd37a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 2.0E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS10085 03a3d1cffdc2b9b87e16b0525ebfd37a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 2.0E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS10085 03a3d1cffdc2b9b87e16b0525ebfd37a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.0E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS10085 03a3d1cffdc2b9b87e16b0525ebfd37a 246 SUPERFAMILY SSF51735 4 244 1.8E-81 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS10085 03a3d1cffdc2b9b87e16b0525ebfd37a 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 244 9.3E-123 T 28-03-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216 APY29_RS10085 03a3d1cffdc2b9b87e16b0525ebfd37a 246 Pfam PF00106 short chain dehydrogenase 5 195 5.5E-60 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS07485 90c9ff9a3934276b23ca92d665be6856 485 Pfam PF01458 Uncharacterized protein family (UPF0051) 223 456 6.8E-67 T 28-03-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 APY29_RS07485 90c9ff9a3934276b23ca92d665be6856 485 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 21 476 2.1E-193 T 28-03-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 APY29_RS07485 90c9ff9a3934276b23ca92d665be6856 485 SUPERFAMILY SSF101960 41 482 1.83E-137 T 28-03-2018 APY29_RS17175 9b0f365335f79c7d159236031c01eaec 911 Gene3D G3DSA:3.40.91.30 788 878 3.7E-6 T 28-03-2018 APY29_RS17175 9b0f365335f79c7d159236031c01eaec 911 Gene3D G3DSA:3.40.50.300 283 457 3.4E-4 T 28-03-2018 APY29_RS17175 9b0f365335f79c7d159236031c01eaec 911 Gene3D G3DSA:3.40.50.300 10 244 1.1E-9 T 28-03-2018 APY29_RS17175 9b0f365335f79c7d159236031c01eaec 911 SUPERFAMILY SSF52540 15 31 2.92E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17175 9b0f365335f79c7d159236031c01eaec 911 SUPERFAMILY SSF52540 63 255 2.92E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17175 9b0f365335f79c7d159236031c01eaec 911 Pfam PF04851 Type III restriction enzyme, res subunit 13 238 1.4E-28 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APY29_RS17175 9b0f365335f79c7d159236031c01eaec 911 SUPERFAMILY SSF52540 330 432 1.72E-8 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17175 9b0f365335f79c7d159236031c01eaec 911 SUPERFAMILY SSF52540 69 104 1.72E-8 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS19485 84d1e17d8846e3a7d4399b286d24c6d9 154 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 42 6.2E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS19485 84d1e17d8846e3a7d4399b286d24c6d9 154 PRINTS PR00813 Bacterial general secretion pathway protein G signature 21 46 6.2E-18 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 APY29_RS19485 84d1e17d8846e3a7d4399b286d24c6d9 154 PRINTS PR00813 Bacterial general secretion pathway protein G signature 57 75 6.2E-18 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 APY29_RS19485 84d1e17d8846e3a7d4399b286d24c6d9 154 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 20 40 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS19485 84d1e17d8846e3a7d4399b286d24c6d9 154 Pfam PF07963 Prokaryotic N-terminal methylation motif 17 42 2.3E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS19485 84d1e17d8846e3a7d4399b286d24c6d9 154 Gene3D G3DSA:3.30.700.10 35 153 3.8E-26 T 28-03-2018 APY29_RS19485 84d1e17d8846e3a7d4399b286d24c6d9 154 Pfam PF08334 Type II secretion system (T2SS), protein G 44 153 7.6E-41 T 28-03-2018 IPR013545 Type II secretion system protein G APY29_RS19485 84d1e17d8846e3a7d4399b286d24c6d9 154 SUPERFAMILY SSF54523 48 153 5.23E-37 T 28-03-2018 APY29_RS19485 84d1e17d8846e3a7d4399b286d24c6d9 154 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 20 153 2.0E-55 T 28-03-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 APY29_RS15720 34fc9cedbb1392aca7f4409ba00d523f 428 SUPERFAMILY SSF53756 35 328 1.29E-31 T 28-03-2018 APY29_RS15720 34fc9cedbb1392aca7f4409ba00d523f 428 SUPERFAMILY SSF53756 359 409 1.29E-31 T 28-03-2018 APY29_RS15720 34fc9cedbb1392aca7f4409ba00d523f 428 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 32 407 6.6E-113 T 28-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 APY29_RS15720 34fc9cedbb1392aca7f4409ba00d523f 428 Pfam PF02684 Lipid-A-disaccharide synthetase 36 382 6.5E-112 T 28-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 APY29_RS15720 34fc9cedbb1392aca7f4409ba00d523f 428 Gene3D G3DSA:3.40.50.2000 28 211 3.1E-7 T 28-03-2018 APY29_RS15720 34fc9cedbb1392aca7f4409ba00d523f 428 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 33 412 41.671 T 28-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 APY29_RS15720 34fc9cedbb1392aca7f4409ba00d523f 428 Gene3D G3DSA:3.40.50.2000 212 409 1.3E-13 T 28-03-2018 APY29_RS15085 ec2e22679945688405d3ac6615b0a407 467 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 1.7E-32 T 28-03-2018 IPR000362 Fumarate lyase family APY29_RS15085 ec2e22679945688405d3ac6615b0a407 467 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 1.7E-32 T 28-03-2018 IPR000362 Fumarate lyase family APY29_RS15085 ec2e22679945688405d3ac6615b0a407 467 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 1.7E-32 T 28-03-2018 IPR000362 Fumarate lyase family APY29_RS15085 ec2e22679945688405d3ac6615b0a407 467 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 1.7E-32 T 28-03-2018 IPR000362 Fumarate lyase family APY29_RS15085 ec2e22679945688405d3ac6615b0a407 467 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 APY29_RS15085 ec2e22679945688405d3ac6615b0a407 467 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 78.662 T 28-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 APY29_RS15085 ec2e22679945688405d3ac6615b0a407 467 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 4.2E-6 T 28-03-2018 APY29_RS15085 ec2e22679945688405d3ac6615b0a407 467 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 4.2E-6 T 28-03-2018 APY29_RS15085 ec2e22679945688405d3ac6615b0a407 467 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 4.2E-6 T 28-03-2018 APY29_RS15085 ec2e22679945688405d3ac6615b0a407 467 Gene3D G3DSA:1.10.275.10 3 133 8.0E-52 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal APY29_RS15085 ec2e22679945688405d3ac6615b0a407 467 Gene3D G3DSA:1.10.40.30 413 457 2.9E-19 T 28-03-2018 APY29_RS15085 ec2e22679945688405d3ac6615b0a407 467 Gene3D G3DSA:1.20.200.10 134 412 6.5E-79 T 28-03-2018 APY29_RS15085 ec2e22679945688405d3ac6615b0a407 467 Pfam PF10415 Fumarase C C-terminus 403 456 1.5E-18 T 28-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 APY29_RS15085 ec2e22679945688405d3ac6615b0a407 467 Pfam PF00206 Lyase 13 337 3.0E-98 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal APY29_RS15085 ec2e22679945688405d3ac6615b0a407 467 SUPERFAMILY SSF48557 5 455 1.07E-140 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 APY29_RS20915 d6c1548d9ac210aa0404357f16b8deb8 1032 Gene3D G3DSA:3.30.2090.10 186 272 7.3E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS20915 d6c1548d9ac210aa0404357f16b8deb8 1032 Gene3D G3DSA:3.30.70.1430 45 149 5.5E-24 T 28-03-2018 APY29_RS20915 d6c1548d9ac210aa0404357f16b8deb8 1032 Gene3D G3DSA:3.30.2090.10 709 796 4.2E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS20915 d6c1548d9ac210aa0404357f16b8deb8 1032 Pfam PF00873 AcrB/AcrD/AcrF family 9 1010 7.0E-142 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS20915 d6c1548d9ac210aa0404357f16b8deb8 1032 SUPERFAMILY SSF82866 793 1017 8.11E-42 T 28-03-2018 APY29_RS20915 d6c1548d9ac210aa0404357f16b8deb8 1032 SUPERFAMILY SSF82693 273 328 1.78E-13 T 28-03-2018 APY29_RS20915 d6c1548d9ac210aa0404357f16b8deb8 1032 SUPERFAMILY SSF82693 144 187 1.78E-13 T 28-03-2018 APY29_RS20915 d6c1548d9ac210aa0404357f16b8deb8 1032 SUPERFAMILY SSF82693 45 140 5.58E-16 T 28-03-2018 APY29_RS20915 d6c1548d9ac210aa0404357f16b8deb8 1032 SUPERFAMILY SSF82693 557 642 2.01E-6 T 28-03-2018 APY29_RS20915 d6c1548d9ac210aa0404357f16b8deb8 1032 SUPERFAMILY SSF82714 190 271 3.4E-13 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS20915 d6c1548d9ac210aa0404357f16b8deb8 1032 Gene3D G3DSA:1.20.1640.10 299 500 1.6E-30 T 28-03-2018 APY29_RS20915 d6c1548d9ac210aa0404357f16b8deb8 1032 Gene3D G3DSA:1.20.1640.10 815 1025 2.6E-33 T 28-03-2018 APY29_RS20915 d6c1548d9ac210aa0404357f16b8deb8 1032 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 3.4E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS20915 d6c1548d9ac210aa0404357f16b8deb8 1032 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 3.4E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS20915 d6c1548d9ac210aa0404357f16b8deb8 1032 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 3.4E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS20915 d6c1548d9ac210aa0404357f16b8deb8 1032 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 3.4E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS20915 d6c1548d9ac210aa0404357f16b8deb8 1032 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 3.4E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS20915 d6c1548d9ac210aa0404357f16b8deb8 1032 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 3.4E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS20915 d6c1548d9ac210aa0404357f16b8deb8 1032 SUPERFAMILY SSF82714 710 795 1.01E-13 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS20915 d6c1548d9ac210aa0404357f16b8deb8 1032 Gene3D G3DSA:3.30.70.1430 558 662 2.4E-14 T 28-03-2018 APY29_RS20915 d6c1548d9ac210aa0404357f16b8deb8 1032 SUPERFAMILY SSF82866 299 493 3.01E-34 T 28-03-2018 APY29_RS18040 9b2357ddb7420fb81b1a55eba8fe2505 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 47.199 T 28-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 APY29_RS18040 9b2357ddb7420fb81b1a55eba8fe2505 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 2.7E-53 T 28-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 APY29_RS18040 9b2357ddb7420fb81b1a55eba8fe2505 275 SMART SM01382 124 253 4.3E-87 T 28-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 APY29_RS18040 9b2357ddb7420fb81b1a55eba8fe2505 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 28-03-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18040 9b2357ddb7420fb81b1a55eba8fe2505 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 2.4E-34 T 28-03-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18040 9b2357ddb7420fb81b1a55eba8fe2505 275 SMART SM01383 42 118 6.6E-44 T 28-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18040 9b2357ddb7420fb81b1a55eba8fe2505 275 SUPERFAMILY SSF50104 127 273 8.42E-57 T 28-03-2018 IPR008991 Translation protein SH3-like domain APY29_RS18040 9b2357ddb7420fb81b1a55eba8fe2505 275 PIRSF PIRSF002158 6 275 1.6E-97 T 28-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18040 9b2357ddb7420fb81b1a55eba8fe2505 275 SUPERFAMILY SSF50249 3 125 3.05E-48 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS18040 9b2357ddb7420fb81b1a55eba8fe2505 275 Gene3D G3DSA:2.30.30.30 119 195 4.2E-30 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 APY29_RS18040 9b2357ddb7420fb81b1a55eba8fe2505 275 Gene3D G3DSA:2.40.50.140 1 114 1.7E-46 T 28-03-2018 APY29_RS18040 9b2357ddb7420fb81b1a55eba8fe2505 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 274 6.3E-131 T 28-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 APY29_RS18040 9b2357ddb7420fb81b1a55eba8fe2505 275 Gene3D G3DSA:4.10.950.10 197 274 6.4E-34 T 28-03-2018 IPR014726 Ribosomal protein L2, domain 3 APY29_RS18175 a46a6797a15de033a903d1c153d3bd3a 295 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 16 286 2.6E-71 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 APY29_RS18175 a46a6797a15de033a903d1c153d3bd3a 295 Pfam PF08544 GHMP kinases C terminal 213 269 5.2E-6 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain APY29_RS18175 a46a6797a15de033a903d1c153d3bd3a 295 Pfam PF00288 GHMP kinases N terminal domain 99 155 2.5E-10 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 APY29_RS18175 a46a6797a15de033a903d1c153d3bd3a 295 Gene3D G3DSA:3.30.230.10 15 171 8.1E-44 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APY29_RS18175 a46a6797a15de033a903d1c153d3bd3a 295 SUPERFAMILY SSF54211 17 170 4.48E-44 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS18175 a46a6797a15de033a903d1c153d3bd3a 295 PIRSF PIRSF010376 13 291 2.9E-85 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 APY29_RS18175 a46a6797a15de033a903d1c153d3bd3a 295 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 15 283 31.949 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 APY29_RS18175 a46a6797a15de033a903d1c153d3bd3a 295 Gene3D G3DSA:3.30.70.890 173 290 7.2E-23 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain APY29_RS18175 a46a6797a15de033a903d1c153d3bd3a 295 SUPERFAMILY SSF55060 171 287 1.01E-25 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain APY29_RS07660 0127f2f44bd3e520adc898acb8642ca1 316 Gene3D G3DSA:3.30.390.50 225 314 2.5E-15 T 28-03-2018 APY29_RS07660 0127f2f44bd3e520adc898acb8642ca1 316 Gene3D G3DSA:3.30.465.10 135 221 1.2E-14 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APY29_RS07660 0127f2f44bd3e520adc898acb8642ca1 316 Gene3D G3DSA:3.30.465.10 54 134 9.7E-16 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APY29_RS07660 0127f2f44bd3e520adc898acb8642ca1 316 SUPERFAMILY SSF55447 224 313 1.44E-20 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal APY29_RS07660 0127f2f44bd3e520adc898acb8642ca1 316 Gene3D G3DSA:3.30.43.10 1 51 5.3E-20 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APY29_RS07660 0127f2f44bd3e520adc898acb8642ca1 316 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 227 274 6.4E-7 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal APY29_RS07660 0127f2f44bd3e520adc898acb8642ca1 316 SMART SM01092 226 314 5.6E-20 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal APY29_RS07660 0127f2f44bd3e520adc898acb8642ca1 316 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 221 4.0E-51 T 28-03-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 APY29_RS07660 0127f2f44bd3e520adc898acb8642ca1 316 SUPERFAMILY SSF56176 1 220 6.0E-58 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APY29_RS15800 3f372adcc42702c1ceeb605c99032899 321 Pfam PF02574 Homocysteine S-methyltransferase 24 317 1.4E-79 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 APY29_RS15800 3f372adcc42702c1ceeb605c99032899 321 Gene3D G3DSA:3.20.20.330 3 321 5.2E-100 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 APY29_RS15800 3f372adcc42702c1ceeb605c99032899 321 PIRSF PIRSF037505 126 259 580.0 T 28-03-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 APY29_RS15800 3f372adcc42702c1ceeb605c99032899 321 PIRSF PIRSF037505 268 321 1.5 T 28-03-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 APY29_RS15800 3f372adcc42702c1ceeb605c99032899 321 PIRSF PIRSF037505 7 114 1.9E-7 T 28-03-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 APY29_RS15800 3f372adcc42702c1ceeb605c99032899 321 SUPERFAMILY SSF82282 18 319 2.62E-82 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 APY29_RS04870 02d8a53328939c10fe3fc26cbfafd739 255 Gene3D G3DSA:3.40.190.10 23 147 1.9E-18 T 28-03-2018 APY29_RS04870 02d8a53328939c10fe3fc26cbfafd739 255 SUPERFAMILY SSF53850 23 252 2.18E-40 T 28-03-2018 APY29_RS04870 02d8a53328939c10fe3fc26cbfafd739 255 Pfam PF13531 Bacterial extracellular solute-binding protein 24 249 6.7E-36 T 28-03-2018 APY29_RS04870 02d8a53328939c10fe3fc26cbfafd739 255 Gene3D G3DSA:3.40.190.10 163 254 1.8E-4 T 28-03-2018 APY29_RS16715 aaa9984b3fc9a59b77d5377ab6b856f1 106 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 25.564 T 28-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS16715 aaa9984b3fc9a59b77d5377ab6b856f1 106 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 5.1E-34 T 28-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS16715 aaa9984b3fc9a59b77d5377ab6b856f1 106 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 28-03-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS16715 aaa9984b3fc9a59b77d5377ab6b856f1 106 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 7.1E-37 T 28-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS16715 aaa9984b3fc9a59b77d5377ab6b856f1 106 SUPERFAMILY SSF141091 1 100 1.19E-33 T 28-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS23350 c0b31dcdddfa66270f4f4e288a2c2f99 145 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 62 108 4.0E-20 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APY29_RS23350 c0b31dcdddfa66270f4f4e288a2c2f99 145 Pfam PF00825 Ribonuclease P 10 115 6.5E-25 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APY29_RS23350 c0b31dcdddfa66270f4f4e288a2c2f99 145 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 59 73 - T 28-03-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 APY29_RS23350 c0b31dcdddfa66270f4f4e288a2c2f99 145 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 10 118 17.962 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APY29_RS23350 c0b31dcdddfa66270f4f4e288a2c2f99 145 SUPERFAMILY SSF54211 10 116 1.06E-24 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS23350 c0b31dcdddfa66270f4f4e288a2c2f99 145 Gene3D G3DSA:3.30.230.10 7 119 9.4E-28 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APY29_RS23350 c0b31dcdddfa66270f4f4e288a2c2f99 145 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 14 116 3.1E-19 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APY29_RS06725 e0365b12164489cf80e7156b5373c321 886 Gene3D G3DSA:3.20.20.300 31 357 1.0E-100 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS06725 e0365b12164489cf80e7156b5373c321 886 SUPERFAMILY SSF52279 373 440 1.15E-51 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APY29_RS06725 e0365b12164489cf80e7156b5373c321 886 SUPERFAMILY SSF52279 608 762 1.15E-51 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APY29_RS06725 e0365b12164489cf80e7156b5373c321 886 Gene3D G3DSA:2.60.40.10 760 875 1.4E-28 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS06725 e0365b12164489cf80e7156b5373c321 886 Pfam PF07691 PA14 domain 456 606 2.2E-30 T 28-03-2018 IPR011658 PA14 domain APY29_RS06725 e0365b12164489cf80e7156b5373c321 886 SMART SM01217 796 864 1.3E-26 T 28-03-2018 IPR026891 Fibronectin type III-like domain APY29_RS06725 e0365b12164489cf80e7156b5373c321 886 Gene3D G3DSA:3.40.50.1700 358 759 7.8E-79 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APY29_RS06725 e0365b12164489cf80e7156b5373c321 886 Pfam PF14310 Fibronectin type III-like domain 796 862 1.8E-19 T 28-03-2018 IPR026891 Fibronectin type III-like domain APY29_RS06725 e0365b12164489cf80e7156b5373c321 886 SMART SM00758 456 610 1.6E-24 T 28-03-2018 IPR011658 PA14 domain APY29_RS06725 e0365b12164489cf80e7156b5373c321 886 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 373 759 1.1E-60 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APY29_RS06725 e0365b12164489cf80e7156b5373c321 886 SUPERFAMILY SSF51445 31 372 1.37E-91 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS06725 e0365b12164489cf80e7156b5373c321 886 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 49 330 6.7E-43 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS06725 e0365b12164489cf80e7156b5373c321 886 SUPERFAMILY SSF56988 459 636 3.66E-23 T 28-03-2018 APY29_RS06725 e0365b12164489cf80e7156b5373c321 886 PRINTS PR00133 Glycosyl hydrolase family 3 signature 88 107 9.7E-10 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS06725 e0365b12164489cf80e7156b5373c321 886 PRINTS PR00133 Glycosyl hydrolase family 3 signature 184 200 9.7E-10 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS06725 e0365b12164489cf80e7156b5373c321 886 PRINTS PR00133 Glycosyl hydrolase family 3 signature 255 273 9.7E-10 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS21685 f75e850ec126e59e3acafaedb537f89b 418 SUPERFAMILY SSF53383 17 396 4.54E-91 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS21685 f75e850ec126e59e3acafaedb537f89b 418 Gene3D G3DSA:3.90.1150.10 291 418 1.6E-34 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS21685 f75e850ec126e59e3acafaedb537f89b 418 Pfam PF00266 Aminotransferase class-V 36 356 6.3E-24 T 28-03-2018 IPR000192 Aminotransferase class V domain APY29_RS21685 f75e850ec126e59e3acafaedb537f89b 418 Gene3D G3DSA:3.40.640.10 17 290 1.1E-40 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS21685 f75e850ec126e59e3acafaedb537f89b 418 PIRSF PIRSF000524 13 418 1.9E-109 T 28-03-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 APY29_RS09315 df218617d48d3f8747f994d116a3b5ce 357 Gene3D G3DSA:1.10.340.30 28 124 4.3E-32 T 28-03-2018 APY29_RS09315 df218617d48d3f8747f994d116a3b5ce 357 Gene3D G3DSA:1.10.1670.10 125 234 3.3E-29 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 APY29_RS09315 df218617d48d3f8747f994d116a3b5ce 357 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 43 173 1.2E-17 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 APY29_RS09315 df218617d48d3f8747f994d116a3b5ce 357 SUPERFAMILY SSF55811 230 357 8.12E-28 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 APY29_RS09315 df218617d48d3f8747f994d116a3b5ce 357 Pfam PF00633 Helix-hairpin-helix motif 107 134 8.5E-8 T 28-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 APY29_RS09315 df218617d48d3f8747f994d116a3b5ce 357 ProSitePatterns PS01155 Endonuclease III family signature. 109 138 - T 28-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 APY29_RS09315 df218617d48d3f8747f994d116a3b5ce 357 Pfam PF14815 NUDIX domain 244 356 2.9E-24 T 28-03-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 APY29_RS09315 df218617d48d3f8747f994d116a3b5ce 357 SMART SM00478 46 200 6.1E-40 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 APY29_RS09315 df218617d48d3f8747f994d116a3b5ce 357 Gene3D G3DSA:3.90.79.10 239 357 2.5E-13 T 28-03-2018 APY29_RS09315 df218617d48d3f8747f994d116a3b5ce 357 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 13 286 1.8E-99 T 28-03-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 APY29_RS09315 df218617d48d3f8747f994d116a3b5ce 357 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 202 218 - T 28-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 APY29_RS09315 df218617d48d3f8747f994d116a3b5ce 357 SUPERFAMILY SSF48150 11 234 1.18E-70 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 APY29_RS15945 107cac6d597fe9d6ace15316ce9f5ea2 403 Gene3D G3DSA:1.20.1250.20 9 201 2.2E-32 T 28-03-2018 APY29_RS15945 107cac6d597fe9d6ace15316ce9f5ea2 403 SUPERFAMILY SSF103473 11 395 3.14E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS15945 107cac6d597fe9d6ace15316ce9f5ea2 403 Gene3D G3DSA:1.20.1250.20 202 398 3.5E-20 T 28-03-2018 APY29_RS15945 107cac6d597fe9d6ace15316ce9f5ea2 403 Pfam PF07690 Major Facilitator Superfamily 23 339 2.4E-37 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS20900 24c1c6897e779b808ccae63053f8a184 430 SUPERFAMILY SSF52540 80 366 5.79E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS20900 24c1c6897e779b808ccae63053f8a184 430 Gene3D G3DSA:3.40.50.300 11 225 9.6E-58 T 28-03-2018 APY29_RS20900 24c1c6897e779b808ccae63053f8a184 430 SMART SM00487 24 224 6.2E-55 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APY29_RS20900 24c1c6897e779b808ccae63053f8a184 430 SMART SM00490 263 344 6.8E-29 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS20900 24c1c6897e779b808ccae63053f8a184 430 Pfam PF00270 DEAD/DEAH box helicase 29 198 3.5E-44 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APY29_RS20900 24c1c6897e779b808ccae63053f8a184 430 Gene3D G3DSA:3.40.50.300 226 428 1.2E-41 T 28-03-2018 APY29_RS20900 24c1c6897e779b808ccae63053f8a184 430 Pfam PF00271 Helicase conserved C-terminal domain 239 344 1.3E-26 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS20900 24c1c6897e779b808ccae63053f8a184 430 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 158 166 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APY29_RS17905 d973fc257c8cf7d5e0849d758d86a86b 465 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 17 458 9.4E-224 T 28-03-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 APY29_RS17905 d973fc257c8cf7d5e0849d758d86a86b 465 Pfam PF01474 Class-II DAHP synthetase family 17 451 6.1E-187 T 28-03-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 APY29_RS17905 d973fc257c8cf7d5e0849d758d86a86b 465 SUPERFAMILY SSF51569 13 454 3.15E-181 T 28-03-2018 APY29_RS17905 d973fc257c8cf7d5e0849d758d86a86b 465 Gene3D G3DSA:3.20.20.70 267 405 4.3E-4 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS16575 2b83a203d7b152b76a9f138eb4a5f1c7 1166 Pfam PF13086 AAA domain 263 460 4.7E-9 T 28-03-2018 APY29_RS16575 2b83a203d7b152b76a9f138eb4a5f1c7 1166 Gene3D G3DSA:3.40.50.300 256 796 4.9E-18 T 28-03-2018 APY29_RS16575 2b83a203d7b152b76a9f138eb4a5f1c7 1166 SUPERFAMILY SSF52540 258 336 5.74E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS16575 2b83a203d7b152b76a9f138eb4a5f1c7 1166 SUPERFAMILY SSF52540 781 968 5.74E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS16575 2b83a203d7b152b76a9f138eb4a5f1c7 1166 SUPERFAMILY SSF52540 484 552 5.74E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS16575 2b83a203d7b152b76a9f138eb4a5f1c7 1166 SUPERFAMILY SSF52540 643 741 5.74E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS16575 2b83a203d7b152b76a9f138eb4a5f1c7 1166 PIRSF PIRSF026306 1 1163 0.0 T 28-03-2018 IPR016834 Uncharacterised conserved protein UCP026306 APY29_RS16575 2b83a203d7b152b76a9f138eb4a5f1c7 1166 Pfam PF13087 AAA domain 784 965 1.8E-21 T 28-03-2018 APY29_RS16575 2b83a203d7b152b76a9f138eb4a5f1c7 1166 Gene3D G3DSA:3.40.50.300 797 971 6.3E-23 T 28-03-2018 APY29_RS16575 2b83a203d7b152b76a9f138eb4a5f1c7 1166 Pfam PF13091 PLD-like domain 1022 1126 1.8E-9 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 APY29_RS16575 2b83a203d7b152b76a9f138eb4a5f1c7 1166 Gene3D G3DSA:3.30.870.10 972 1154 1.4E-14 T 28-03-2018 APY29_RS16575 2b83a203d7b152b76a9f138eb4a5f1c7 1166 SUPERFAMILY SSF56024 1003 1153 3.4E-18 T 28-03-2018 APY29_RS08090 63cf6c1b5c4c1703339a291b9643891e 240 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 74 226 2.5E-46 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APY29_RS08090 63cf6c1b5c4c1703339a291b9643891e 240 Pfam PF01479 S4 domain 4 48 1.6E-9 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS08090 63cf6c1b5c4c1703339a291b9643891e 240 SUPERFAMILY SSF55174 3 58 1.16E-12 T 28-03-2018 APY29_RS08090 63cf6c1b5c4c1703339a291b9643891e 240 SMART SM00363 3 62 5.5E-8 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS08090 63cf6c1b5c4c1703339a291b9643891e 240 Pfam PF00849 RNA pseudouridylate synthase 70 149 8.0E-13 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS08090 63cf6c1b5c4c1703339a291b9643891e 240 Gene3D G3DSA:3.30.2350.10 66 239 7.6E-30 T 28-03-2018 APY29_RS08090 63cf6c1b5c4c1703339a291b9643891e 240 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 105 119 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APY29_RS08090 63cf6c1b5c4c1703339a291b9643891e 240 Gene3D G3DSA:3.10.290.10 1 63 7.4E-15 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS08090 63cf6c1b5c4c1703339a291b9643891e 240 SUPERFAMILY SSF55120 67 230 1.46E-35 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS10825 114f03d70e56d5a86100a9e4a191b25d 375 SUPERFAMILY SSF103190 109 209 2.71E-10 T 28-03-2018 IPR029151 Periplasmic sensor domain-like APY29_RS10825 114f03d70e56d5a86100a9e4a191b25d 375 Gene3D G3DSA:3.30.450.20 34 221 5.9E-5 T 28-03-2018 APY29_RS10825 114f03d70e56d5a86100a9e4a191b25d 375 Pfam PF17201 Cache 3/Cache 2 fusion domain 43 235 3.8E-40 T 28-03-2018 IPR033462 Cache 3/Cache 2 fusion domain APY29_RS10825 114f03d70e56d5a86100a9e4a191b25d 375 SUPERFAMILY SSF158472 318 365 7.98E-8 T 28-03-2018 APY29_RS10825 114f03d70e56d5a86100a9e4a191b25d 375 SMART SM00304 317 370 1.1E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS10830 c8e9fb4fef1c6f495f1a05531193bfdf 213 SMART SM00448 8 121 1.1E-34 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS10830 c8e9fb4fef1c6f495f1a05531193bfdf 213 SUPERFAMILY SSF52172 7 129 1.57E-35 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS10830 c8e9fb4fef1c6f495f1a05531193bfdf 213 SMART SM00421 146 203 7.5E-25 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS10830 c8e9fb4fef1c6f495f1a05531193bfdf 213 Pfam PF00072 Response regulator receiver domain 10 121 5.8E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS10830 c8e9fb4fef1c6f495f1a05531193bfdf 213 Gene3D G3DSA:1.10.10.10 145 213 1.8E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS10830 c8e9fb4fef1c6f495f1a05531193bfdf 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS10830 c8e9fb4fef1c6f495f1a05531193bfdf 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 4.2E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS10830 c8e9fb4fef1c6f495f1a05531193bfdf 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 4.2E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS10830 c8e9fb4fef1c6f495f1a05531193bfdf 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 4.2E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS10830 c8e9fb4fef1c6f495f1a05531193bfdf 213 Gene3D G3DSA:3.40.50.2300 8 144 4.6E-38 T 28-03-2018 APY29_RS10830 c8e9fb4fef1c6f495f1a05531193bfdf 213 SUPERFAMILY SSF46894 139 210 1.16E-21 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS10830 c8e9fb4fef1c6f495f1a05531193bfdf 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 6.9E-21 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS08310 7ad9f33f837ba31370939910f31017c7 1036 SUPERFAMILY SSF56935 311 652 7.02E-73 T 28-03-2018 APY29_RS08310 7ad9f33f837ba31370939910f31017c7 1036 SUPERFAMILY SSF56935 960 1036 7.02E-73 T 28-03-2018 APY29_RS08310 7ad9f33f837ba31370939910f31017c7 1036 SUPERFAMILY SSF56935 713 757 7.02E-73 T 28-03-2018 APY29_RS08310 7ad9f33f837ba31370939910f31017c7 1036 SUPERFAMILY SSF56935 127 270 7.02E-73 T 28-03-2018 APY29_RS08310 7ad9f33f837ba31370939910f31017c7 1036 SUPERFAMILY SSF56935 809 924 7.02E-73 T 28-03-2018 APY29_RS08310 7ad9f33f837ba31370939910f31017c7 1036 Gene3D G3DSA:2.170.130.10 136 262 2.8E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS08310 7ad9f33f837ba31370939910f31017c7 1036 Gene3D G3DSA:2.40.170.20 305 1035 6.4E-60 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS08310 7ad9f33f837ba31370939910f31017c7 1036 Pfam PF00593 TonB dependent receptor 387 1034 1.2E-17 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS08310 7ad9f33f837ba31370939910f31017c7 1036 SUPERFAMILY SSF49452 46 122 2.94E-8 T 28-03-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 APY29_RS08310 7ad9f33f837ba31370939910f31017c7 1036 Pfam PF07715 TonB-dependent Receptor Plug Domain 150 250 5.5E-9 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS08310 7ad9f33f837ba31370939910f31017c7 1036 Gene3D G3DSA:2.60.40.1120 53 135 1.3E-10 T 28-03-2018 APY29_RS08310 7ad9f33f837ba31370939910f31017c7 1036 Pfam PF13620 Carboxypeptidase regulatory-like domain 59 122 4.4E-12 T 28-03-2018 APY29_RS16805 fbec121e93e3f0a239f7ca47b630566d 265 Gene3D G3DSA:3.30.1380.10 122 262 2.9E-25 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 APY29_RS16805 fbec121e93e3f0a239f7ca47b630566d 265 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 140 263 9.7E-36 T 28-03-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 APY29_RS16805 fbec121e93e3f0a239f7ca47b630566d 265 SUPERFAMILY SSF55166 135 262 1.36E-23 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 APY29_RS11065 11b951c5f7833419f6613acea296084f 638 SUPERFAMILY SSF52016 421 601 3.22E-51 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APY29_RS11065 11b951c5f7833419f6613acea296084f 638 Pfam PF00920 Dehydratase family 68 599 3.3E-149 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 APY29_RS11065 11b951c5f7833419f6613acea296084f 638 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 4 602 5.4E-268 T 28-03-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 APY29_RS11065 11b951c5f7833419f6613acea296084f 638 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 APY29_RS11065 11b951c5f7833419f6613acea296084f 638 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 156 166 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 APY29_RS11065 11b951c5f7833419f6613acea296084f 638 SUPERFAMILY SSF143975 3 420 4.18E-136 T 28-03-2018 APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 583 609 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 414 427 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 PRINTS PR00046 Major sigma-70 factor signature 414 427 3.3E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 PRINTS PR00046 Major sigma-70 factor signature 583 598 3.3E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 PRINTS PR00046 Major sigma-70 factor signature 562 574 3.3E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 PRINTS PR00046 Major sigma-70 factor signature 438 446 3.3E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 PRINTS PR00046 Major sigma-70 factor signature 598 609 3.3E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 Pfam PF04542 Sigma-70 region 2 390 459 1.7E-21 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 Pfam PF04539 Sigma-70 region 3 469 545 1.2E-30 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 Pfam PF00140 Sigma-70 factor, region 1.2 104 135 5.4E-13 T 28-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 386 611 1.5E-39 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 Pfam PF03979 Sigma-70 factor, region 1.1 8 87 1.3E-28 T 28-03-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 SUPERFAMILY SSF88659 463 536 2.94E-21 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 Gene3D G3DSA:1.10.10.10 552 623 6.3E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 Pfam PF04545 Sigma-70, region 4 558 611 1.8E-19 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 Pfam PF04546 Sigma-70, non-essential region 145 359 8.4E-51 T 28-03-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 Gene3D G3DSA:1.10.10.10 460 510 1.0E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 7 623 45.752 T 28-03-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 SUPERFAMILY SSF88659 520 622 1.77E-27 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 386 622 1.0E-121 T 28-03-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 Gene3D G3DSA:1.10.601.10 121 459 2.0E-97 T 28-03-2018 APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 Gene3D G3DSA:1.10.601.10 3 120 6.8E-14 T 28-03-2018 APY29_RS03140 3b5578faa160e1d10fa059fdea24c78c 625 SUPERFAMILY SSF88946 121 457 2.98E-99 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS00550 07554b4d8f8774343cf8b803f88ceccf 926 Gene3D G3DSA:2.40.170.20 191 926 1.1E-75 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS00550 07554b4d8f8774343cf8b803f88ceccf 926 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 43 926 1.2E-251 T 28-03-2018 IPR010104 Bacterial TonB-dependent receptor APY29_RS00550 07554b4d8f8774343cf8b803f88ceccf 926 SUPERFAMILY SSF56935 544 926 1.76E-96 T 28-03-2018 APY29_RS00550 07554b4d8f8774343cf8b803f88ceccf 926 SUPERFAMILY SSF56935 284 335 1.76E-96 T 28-03-2018 APY29_RS00550 07554b4d8f8774343cf8b803f88ceccf 926 SUPERFAMILY SSF56935 364 503 1.76E-96 T 28-03-2018 APY29_RS00550 07554b4d8f8774343cf8b803f88ceccf 926 SUPERFAMILY SSF56935 31 242 1.76E-96 T 28-03-2018 APY29_RS00550 07554b4d8f8774343cf8b803f88ceccf 926 Pfam PF00593 TonB dependent receptor 426 925 5.2E-38 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS00550 07554b4d8f8774343cf8b803f88ceccf 926 Gene3D G3DSA:2.170.130.10 36 183 4.5E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS00550 07554b4d8f8774343cf8b803f88ceccf 926 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 174 8.8E-11 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS08660 7fdd0e5be24dc1eaea3b32486c1e5345 222 Gene3D G3DSA:3.20.20.70 7 218 4.2E-62 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS08660 7fdd0e5be24dc1eaea3b32486c1e5345 222 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 11 211 9.3E-41 T 28-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 APY29_RS08660 7fdd0e5be24dc1eaea3b32486c1e5345 222 SUPERFAMILY SSF51366 8 214 2.35E-53 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APY29_RS08660 7fdd0e5be24dc1eaea3b32486c1e5345 222 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 8 216 39.117 T 28-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 APY29_RS17950 147401c8823158612e31d07ee53431b0 118 SUPERFAMILY SSF46946 2 114 2.94E-43 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 APY29_RS17950 147401c8823158612e31d07ee53431b0 118 Gene3D G3DSA:4.10.910.10 85 118 8.2E-24 T 28-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS17950 147401c8823158612e31d07ee53431b0 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.631 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS17950 147401c8823158612e31d07ee53431b0 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 5.2E-51 T 28-03-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS17950 147401c8823158612e31d07ee53431b0 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 2.7E-30 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS17950 147401c8823158612e31d07ee53431b0 118 PIRSF PIRSF002134 1 118 1.3E-41 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS17950 147401c8823158612e31d07ee53431b0 118 Gene3D G3DSA:1.10.8.50 1 66 7.7E-21 T 28-03-2018 APY29_RS17950 147401c8823158612e31d07ee53431b0 118 Gene3D G3DSA:4.10.910.10 67 84 1.7E-15 T 28-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS17950 147401c8823158612e31d07ee53431b0 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 28-03-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS15670 afc0c86783e0052b8b8fd2ebce598819 185 Pfam PF01765 Ribosome recycling factor 20 183 2.8E-62 T 28-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 APY29_RS15670 afc0c86783e0052b8b8fd2ebce598819 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 1.3E-70 T 28-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 APY29_RS15670 afc0c86783e0052b8b8fd2ebce598819 185 Gene3D G3DSA:1.10.132.20 74 184 3.5E-37 T 28-03-2018 APY29_RS15670 afc0c86783e0052b8b8fd2ebce598819 185 Gene3D G3DSA:1.10.132.20 2 73 3.3E-9 T 28-03-2018 APY29_RS15670 afc0c86783e0052b8b8fd2ebce598819 185 SUPERFAMILY SSF55194 1 185 5.1E-68 T 28-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 APY29_RS15670 afc0c86783e0052b8b8fd2ebce598819 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.91 T 28-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 APY29_RS18955 2e1116ef8ea181ef5cdd7600f389161b 142 Gene3D G3DSA:3.10.180.10 1 137 1.9E-6 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS18955 2e1116ef8ea181ef5cdd7600f389161b 142 SUPERFAMILY SSF54593 2 91 4.61E-5 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS13260 765d65ced89b93ff4042653f12bfc255 721 Pfam PF00512 His Kinase A (phospho-acceptor) domain 178 243 6.1E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS13260 765d65ced89b93ff4042653f12bfc255 721 SUPERFAMILY SSF52172 453 576 4.27E-32 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS13260 765d65ced89b93ff4042653f12bfc255 721 SUPERFAMILY SSF55874 233 411 4.32E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS13260 765d65ced89b93ff4042653f12bfc255 721 Pfam PF01627 Hpt domain 618 693 7.9E-7 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS13260 765d65ced89b93ff4042653f12bfc255 721 Gene3D G3DSA:1.10.287.130 168 238 2.7E-19 T 28-03-2018 APY29_RS13260 765d65ced89b93ff4042653f12bfc255 721 Gene3D G3DSA:3.40.50.2300 446 584 1.0E-33 T 28-03-2018 APY29_RS13260 765d65ced89b93ff4042653f12bfc255 721 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 366 2.1E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS13260 765d65ced89b93ff4042653f12bfc255 721 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 391 2.1E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS13260 765d65ced89b93ff4042653f12bfc255 721 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 352 2.1E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS13260 765d65ced89b93ff4042653f12bfc255 721 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 410 2.1E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS13260 765d65ced89b93ff4042653f12bfc255 721 Gene3D G3DSA:1.20.120.160 593 703 1.9E-13 T 28-03-2018 APY29_RS13260 765d65ced89b93ff4042653f12bfc255 721 SMART SM00387 290 413 2.4E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS13260 765d65ced89b93ff4042653f12bfc255 721 SMART SM00388 178 243 1.8E-24 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS13260 765d65ced89b93ff4042653f12bfc255 721 SMART SM00448 455 570 6.5E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS13260 765d65ced89b93ff4042653f12bfc255 721 SUPERFAMILY SSF47226 596 702 2.36E-16 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS13260 765d65ced89b93ff4042653f12bfc255 721 SUPERFAMILY SSF47384 161 244 4.9E-21 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS13260 765d65ced89b93ff4042653f12bfc255 721 Pfam PF00072 Response regulator receiver domain 457 570 2.8E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS13260 765d65ced89b93ff4042653f12bfc255 721 SMART SM00073 608 706 2.1E-7 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS13260 765d65ced89b93ff4042653f12bfc255 721 Gene3D G3DSA:3.30.565.10 247 421 2.4E-41 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS13260 765d65ced89b93ff4042653f12bfc255 721 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 290 411 2.6E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16700 5c9d0a76c601516a1d76e161ba792704 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 86 1.5E-28 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS16700 5c9d0a76c601516a1d76e161ba792704 89 Pfam PF01649 Ribosomal protein S20 2 84 1.0E-25 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS16700 5c9d0a76c601516a1d76e161ba792704 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 89 4.0E-25 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS16700 5c9d0a76c601516a1d76e161ba792704 89 SUPERFAMILY SSF46992 3 86 2.35E-29 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS16700 5c9d0a76c601516a1d76e161ba792704 89 Gene3D G3DSA:1.20.58.110 1 89 1.4E-26 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS16700 5c9d0a76c601516a1d76e161ba792704 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.039 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS06645 da3f660f7b8f6013be02a1d1041679d1 538 SMART SM00369 308 332 210.0 T 28-03-2018 IPR003591 Leucine-rich repeat, typical subtype APY29_RS06645 da3f660f7b8f6013be02a1d1041679d1 538 SMART SM00369 214 236 19.0 T 28-03-2018 IPR003591 Leucine-rich repeat, typical subtype APY29_RS06645 da3f660f7b8f6013be02a1d1041679d1 538 SMART SM00369 237 260 230.0 T 28-03-2018 IPR003591 Leucine-rich repeat, typical subtype APY29_RS06645 da3f660f7b8f6013be02a1d1041679d1 538 SMART SM00369 158 181 11.0 T 28-03-2018 IPR003591 Leucine-rich repeat, typical subtype APY29_RS06645 da3f660f7b8f6013be02a1d1041679d1 538 Gene3D G3DSA:3.80.10.10 116 215 1.5E-15 T 28-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like APY29_RS06645 da3f660f7b8f6013be02a1d1041679d1 538 SUPERFAMILY SSF52058 117 334 4.25E-36 T 28-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like APY29_RS06645 da3f660f7b8f6013be02a1d1041679d1 538 Gene3D G3DSA:3.80.10.10 216 270 3.3E-13 T 28-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like APY29_RS06645 da3f660f7b8f6013be02a1d1041679d1 538 Pfam PF13855 Leucine rich repeat 216 271 1.0E-7 T 28-03-2018 IPR001611 Leucine-rich repeat GO:0005515 APY29_RS06645 da3f660f7b8f6013be02a1d1041679d1 538 Gene3D G3DSA:3.80.10.10 271 472 4.0E-13 T 28-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like APY29_RS21585 8c279a5759ba221bc3966ff3f67d0616 237 Gene3D G3DSA:1.10.10.10 1 83 3.5E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS21585 8c279a5759ba221bc3966ff3f67d0616 237 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.8E-24 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS21585 8c279a5759ba221bc3966ff3f67d0616 237 SUPERFAMILY SSF46785 1 110 1.44E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS21585 8c279a5759ba221bc3966ff3f67d0616 237 Gene3D G3DSA:3.40.190.10 178 233 2.1E-16 T 28-03-2018 APY29_RS21585 8c279a5759ba221bc3966ff3f67d0616 237 Pfam PF03466 LysR substrate binding domain 87 232 6.7E-32 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS21585 8c279a5759ba221bc3966ff3f67d0616 237 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS21585 8c279a5759ba221bc3966ff3f67d0616 237 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS21585 8c279a5759ba221bc3966ff3f67d0616 237 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS21585 8c279a5759ba221bc3966ff3f67d0616 237 SUPERFAMILY SSF53850 88 232 5.27E-28 T 28-03-2018 APY29_RS21585 8c279a5759ba221bc3966ff3f67d0616 237 Gene3D G3DSA:3.40.190.10 88 177 4.6E-23 T 28-03-2018 APY29_RS10060 b0c63477fd30263c7aff44709e30b0d7 625 SMART SM01340 209 327 1.3E-56 T 28-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 APY29_RS10060 b0c63477fd30263c7aff44709e30b0d7 625 Gene3D G3DSA:3.30.565.10 1 199 9.8E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS10060 b0c63477fd30263c7aff44709e30b0d7 625 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 307 5.3E-96 T 28-03-2018 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 APY29_RS10060 b0c63477fd30263c7aff44709e30b0d7 625 SUPERFAMILY SSF55874 2 201 1.7E-53 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS10060 b0c63477fd30263c7aff44709e30b0d7 625 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 28-03-2018 IPR014762 DNA mismatch repair, conserved site APY29_RS10060 b0c63477fd30263c7aff44709e30b0d7 625 SUPERFAMILY SSF118116 434 623 3.79E-60 T 28-03-2018 APY29_RS10060 b0c63477fd30263c7aff44709e30b0d7 625 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 211 326 1.9E-38 T 28-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 APY29_RS10060 b0c63477fd30263c7aff44709e30b0d7 625 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 621 29.062 T 28-03-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 APY29_RS10060 b0c63477fd30263c7aff44709e30b0d7 625 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 118 4.5E-10 T 28-03-2018 APY29_RS10060 b0c63477fd30263c7aff44709e30b0d7 625 SUPERFAMILY SSF54211 205 327 2.69E-35 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS10060 b0c63477fd30263c7aff44709e30b0d7 625 SMART SM00853 438 581 1.9E-56 T 28-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 APY29_RS10060 b0c63477fd30263c7aff44709e30b0d7 625 Pfam PF08676 MutL C terminal dimerisation domain 434 581 1.5E-49 T 28-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 APY29_RS10060 b0c63477fd30263c7aff44709e30b0d7 625 Gene3D G3DSA:3.30.230.10 214 326 1.2E-29 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APY29_RS20780 af2a3aa1589a495a54fe8d26f0d2c0ee 532 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 357 368 2.6E-19 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 APY29_RS20780 af2a3aa1589a495a54fe8d26f0d2c0ee 532 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 336 352 2.6E-19 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 APY29_RS20780 af2a3aa1589a495a54fe8d26f0d2c0ee 532 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 299 319 2.6E-19 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 APY29_RS20780 af2a3aa1589a495a54fe8d26f0d2c0ee 532 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 426 442 2.6E-19 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 APY29_RS20780 af2a3aa1589a495a54fe8d26f0d2c0ee 532 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 197 345 9.6E-48 T 28-03-2018 IPR013856 Peptidase M4 domain GO:0004222 APY29_RS20780 af2a3aa1589a495a54fe8d26f0d2c0ee 532 Gene3D G3DSA:1.10.390.10 350 532 1.4E-46 T 28-03-2018 APY29_RS20780 af2a3aa1589a495a54fe8d26f0d2c0ee 532 Gene3D G3DSA:3.10.170.10 195 349 7.9E-48 T 28-03-2018 APY29_RS20780 af2a3aa1589a495a54fe8d26f0d2c0ee 532 SUPERFAMILY SSF55486 193 531 8.06E-82 T 28-03-2018 APY29_RS20780 af2a3aa1589a495a54fe8d26f0d2c0ee 532 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 348 531 6.2E-51 T 28-03-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 APY29_RS20780 af2a3aa1589a495a54fe8d26f0d2c0ee 532 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 53 92 1.7E-13 T 28-03-2018 IPR011096 FTP domain APY29_RS15715 a93808dca67cd04d16c1600eee577564 263 Gene3D G3DSA:2.160.10.10 2 191 1.7E-43 T 28-03-2018 APY29_RS15715 a93808dca67cd04d16c1600eee577564 263 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 260 4.8E-25 T 28-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 APY29_RS15715 a93808dca67cd04d16c1600eee577564 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 4.1E-6 T 28-03-2018 IPR001451 Hexapeptide repeat APY29_RS15715 a93808dca67cd04d16c1600eee577564 263 Gene3D G3DSA:1.20.1180.10 198 263 1.6E-20 T 28-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 APY29_RS15715 a93808dca67cd04d16c1600eee577564 263 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 261 7.2E-103 T 28-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 APY29_RS15715 a93808dca67cd04d16c1600eee577564 263 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 263 44.846 T 28-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 APY29_RS15715 a93808dca67cd04d16c1600eee577564 263 SUPERFAMILY SSF51161 1 262 2.85E-72 T 28-03-2018 IPR011004 Trimeric LpxA-like APY29_RS15715 a93808dca67cd04d16c1600eee577564 263 PIRSF PIRSF000456 4 263 1.6E-97 T 28-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 APY29_RS05050 f11dae5b31eb3dc628c4acdd26e038aa 178 Pfam PF00719 Inorganic pyrophosphatase 18 174 2.8E-53 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 APY29_RS05050 f11dae5b31eb3dc628c4acdd26e038aa 178 Gene3D G3DSA:3.90.80.10 3 177 1.7E-54 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 APY29_RS05050 f11dae5b31eb3dc628c4acdd26e038aa 178 SUPERFAMILY SSF50324 7 174 1.44E-66 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 APY29_RS05050 f11dae5b31eb3dc628c4acdd26e038aa 178 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.444 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 APY29_RS23725 f5487b1714f9ad5328d09804a8fe88b1 524 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 128 510 1.9E-100 T 28-03-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain APY29_RS23725 f5487b1714f9ad5328d09804a8fe88b1 524 SUPERFAMILY SSF52540 131 521 8.18E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23725 f5487b1714f9ad5328d09804a8fe88b1 524 Gene3D G3DSA:3.40.50.300 72 522 4.3E-41 T 28-03-2018 APY29_RS04520 f9345633cd2874910b00dffb6d429899 279 SUPERFAMILY SSF53448 26 237 1.08E-11 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS04520 f9345633cd2874910b00dffb6d429899 279 Gene3D G3DSA:3.90.550.10 19 267 3.0E-11 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS23040 29370c31a89273cd12f551d3b49c5a42 405 SUPERFAMILY SSF56024 20 233 1.6E-46 T 28-03-2018 APY29_RS23040 29370c31a89273cd12f551d3b49c5a42 405 Gene3D G3DSA:3.30.870.10 34 227 1.0E-34 T 28-03-2018 APY29_RS23040 29370c31a89273cd12f551d3b49c5a42 405 Pfam PF13091 PLD-like domain 60 201 2.3E-12 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 APY29_RS23040 29370c31a89273cd12f551d3b49c5a42 405 Pfam PF13091 PLD-like domain 247 372 1.4E-27 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 APY29_RS23040 29370c31a89273cd12f551d3b49c5a42 405 SMART SM00155 318 345 0.0022 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 APY29_RS23040 29370c31a89273cd12f551d3b49c5a42 405 SMART SM00155 141 168 8.1 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 APY29_RS23040 29370c31a89273cd12f551d3b49c5a42 405 SUPERFAMILY SSF56024 219 390 6.5E-37 T 28-03-2018 APY29_RS23040 29370c31a89273cd12f551d3b49c5a42 405 Gene3D G3DSA:3.30.870.10 232 397 6.5E-29 T 28-03-2018 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 Gene3D G3DSA:3.50.50.60 300 424 2.9E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 PIRSF PIRSF000350 87 615 4.8E-86 T 28-03-2018 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 Gene3D G3DSA:3.30.390.30 507 614 7.8E-38 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 Gene3D G3DSA:3.50.50.60 145 299 2.1E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 149 606 1.5E-153 T 28-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 283 292 4.6E-69 T 28-03-2018 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 455 462 4.6E-69 T 28-03-2018 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 555 570 4.6E-69 T 28-03-2018 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 412 426 4.6E-69 T 28-03-2018 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 577 597 4.6E-69 T 28-03-2018 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 319 344 4.6E-69 T 28-03-2018 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 182 197 4.6E-69 T 28-03-2018 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 171 4.6E-69 T 28-03-2018 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 490 511 4.6E-69 T 28-03-2018 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 SUPERFAMILY SSF51905 148 528 5.18E-62 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 149 475 2.8E-68 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 183 193 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 280 298 1.1E-39 T 28-03-2018 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 319 337 1.1E-39 T 28-03-2018 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 411 427 1.1E-39 T 28-03-2018 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 440 462 1.1E-39 T 28-03-2018 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 169 1.1E-39 T 28-03-2018 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 Gene3D G3DSA:3.50.50.60 425 506 1.5E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 494 602 5.7E-35 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 SUPERFAMILY SSF55424 492 613 8.76E-39 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 Gene3D G3DSA:2.40.50.100 11 63 5.3E-13 T 28-03-2018 APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 SUPERFAMILY SSF51230 2 95 5.76E-23 T 28-03-2018 IPR011053 Single hybrid motif APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 Pfam PF00364 Biotin-requiring enzyme 5 74 4.3E-20 T 28-03-2018 IPR000089 Biotin/lipoyl attachment APY29_RS03835 58074d07aa7b437188120c12e9755ca7 619 Gene3D G3DSA:3.90.1170.30 64 101 0.013 T 28-03-2018 APY29_RS16830 e739324b74147af22f3cf881f1e7e404 398 Gene3D G3DSA:3.30.565.10 243 387 3.3E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16830 e739324b74147af22f3cf881f1e7e404 398 SUPERFAMILY SSF55874 276 383 2.36E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16830 e739324b74147af22f3cf881f1e7e404 398 Pfam PF07730 Histidine kinase 199 261 4.0E-15 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 APY29_RS06345 00bcffb1361c5366240a04d0ce8e0f70 346 Gene3D G3DSA:1.10.8.60 186 256 8.2E-32 T 28-03-2018 APY29_RS06345 00bcffb1361c5366240a04d0ce8e0f70 346 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 25 328 1.2E-145 T 28-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 APY29_RS06345 00bcffb1361c5366240a04d0ce8e0f70 346 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 6 237 1.7E-118 T 28-03-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 APY29_RS06345 00bcffb1361c5366240a04d0ce8e0f70 346 Gene3D G3DSA:3.40.50.300 20 183 4.9E-27 T 28-03-2018 APY29_RS06345 00bcffb1361c5366240a04d0ce8e0f70 346 SUPERFAMILY SSF46785 259 332 2.84E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS06345 00bcffb1361c5366240a04d0ce8e0f70 346 SMART SM00382 53 180 3.4E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS06345 00bcffb1361c5366240a04d0ce8e0f70 346 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 255 328 3.6E-33 T 28-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 APY29_RS06345 00bcffb1361c5366240a04d0ce8e0f70 346 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 252 334 1.0E-40 T 28-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 APY29_RS06345 00bcffb1361c5366240a04d0ce8e0f70 346 Gene3D G3DSA:1.10.10.10 259 329 4.1E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS06345 00bcffb1361c5366240a04d0ce8e0f70 346 SUPERFAMILY SSF52540 22 254 1.05E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS06345 00bcffb1361c5366240a04d0ce8e0f70 346 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 346 178.756 T 28-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 APY29_RS16300 cfbea13f66659945c57c0a2ebf2bf510 873 Pfam PF01624 MutS domain I 20 131 8.4E-41 T 28-03-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 APY29_RS16300 cfbea13f66659945c57c0a2ebf2bf510 873 SUPERFAMILY SSF53150 126 277 2.75E-41 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APY29_RS16300 cfbea13f66659945c57c0a2ebf2bf510 873 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 19 865 24.783 T 28-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 APY29_RS16300 cfbea13f66659945c57c0a2ebf2bf510 873 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 699 715 - T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APY29_RS16300 cfbea13f66659945c57c0a2ebf2bf510 873 Gene3D G3DSA:3.40.1170.10 7 143 8.3E-45 T 28-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 APY29_RS16300 cfbea13f66659945c57c0a2ebf2bf510 873 PIRSF PIRSF037677 227 852 1.9E-118 T 28-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 APY29_RS16300 cfbea13f66659945c57c0a2ebf2bf510 873 PIRSF PIRSF037677 14 197 6.1E-26 T 28-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 APY29_RS16300 cfbea13f66659945c57c0a2ebf2bf510 873 Gene3D G3DSA:3.30.420.110 144 274 1.6E-29 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APY29_RS16300 cfbea13f66659945c57c0a2ebf2bf510 873 Gene3D G3DSA:1.10.1420.10 419 546 1.4E-27 T 28-03-2018 APY29_RS16300 cfbea13f66659945c57c0a2ebf2bf510 873 SUPERFAMILY SSF55271 16 127 1.96E-41 T 28-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 APY29_RS16300 cfbea13f66659945c57c0a2ebf2bf510 873 Pfam PF05190 MutS family domain IV 439 530 7.9E-29 T 28-03-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 APY29_RS16300 cfbea13f66659945c57c0a2ebf2bf510 873 SMART SM00534 618 810 5.6E-112 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APY29_RS16300 cfbea13f66659945c57c0a2ebf2bf510 873 SUPERFAMILY SSF52540 578 814 9.3E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS16300 cfbea13f66659945c57c0a2ebf2bf510 873 Pfam PF00488 MutS domain V 621 813 5.4E-82 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APY29_RS16300 cfbea13f66659945c57c0a2ebf2bf510 873 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 19 870 0.0 T 28-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 APY29_RS16300 cfbea13f66659945c57c0a2ebf2bf510 873 Gene3D G3DSA:3.40.50.300 578 815 5.8E-42 T 28-03-2018 APY29_RS16300 cfbea13f66659945c57c0a2ebf2bf510 873 Pfam PF05188 MutS domain II 141 264 5.0E-28 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APY29_RS16300 cfbea13f66659945c57c0a2ebf2bf510 873 Gene3D G3DSA:1.10.1420.10 275 418 1.1E-30 T 28-03-2018 APY29_RS16300 cfbea13f66659945c57c0a2ebf2bf510 873 SMART SM00533 295 602 7.3E-89 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APY29_RS16300 cfbea13f66659945c57c0a2ebf2bf510 873 Pfam PF05192 MutS domain III 281 570 2.0E-35 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APY29_RS16300 cfbea13f66659945c57c0a2ebf2bf510 873 SUPERFAMILY SSF48334 279 576 4.97E-82 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APY29_RS12810 07f79ee404e74016eebc1901de8a480e 381 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 173 375 5.7E-13 T 28-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 APY29_RS12810 07f79ee404e74016eebc1901de8a480e 381 Gene3D G3DSA:3.90.380.10 139 380 3.2E-31 T 28-03-2018 APY29_RS12810 07f79ee404e74016eebc1901de8a480e 381 Pfam PF00355 Rieske [2Fe-2S] domain 37 109 1.6E-14 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APY29_RS12810 07f79ee404e74016eebc1901de8a480e 381 SUPERFAMILY SSF55961 149 374 1.26E-25 T 28-03-2018 APY29_RS12810 07f79ee404e74016eebc1901de8a480e 381 Gene3D G3DSA:2.102.10.10 25 138 3.0E-21 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APY29_RS12810 07f79ee404e74016eebc1901de8a480e 381 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 12 37 1.0E-8 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 APY29_RS12810 07f79ee404e74016eebc1901de8a480e 381 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 126 152 1.0E-8 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 APY29_RS12810 07f79ee404e74016eebc1901de8a480e 381 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 164 186 1.0E-8 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 APY29_RS12810 07f79ee404e74016eebc1901de8a480e 381 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 82 102 1.0E-8 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 APY29_RS12810 07f79ee404e74016eebc1901de8a480e 381 SUPERFAMILY SSF50022 4 141 1.96E-35 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APY29_RS00195 0e2026cc5177a1f03abfeac2dfb99ad6 598 Gene3D G3DSA:3.40.630.10 276 528 1.2E-32 T 28-03-2018 APY29_RS00195 0e2026cc5177a1f03abfeac2dfb99ad6 598 Gene3D G3DSA:3.50.30.30 133 275 4.0E-15 T 28-03-2018 APY29_RS00195 0e2026cc5177a1f03abfeac2dfb99ad6 598 SUPERFAMILY SSF53187 304 545 6.82E-62 T 28-03-2018 APY29_RS00195 0e2026cc5177a1f03abfeac2dfb99ad6 598 SUPERFAMILY SSF53187 51 98 6.82E-62 T 28-03-2018 APY29_RS00195 0e2026cc5177a1f03abfeac2dfb99ad6 598 SUPERFAMILY SSF52025 153 281 7.19E-5 T 28-03-2018 APY29_RS00195 0e2026cc5177a1f03abfeac2dfb99ad6 598 Pfam PF04389 Peptidase family M28 320 535 2.0E-50 T 28-03-2018 IPR007484 Peptidase M28 APY29_RS00195 0e2026cc5177a1f03abfeac2dfb99ad6 598 Pfam PF02225 PA domain 154 245 4.4E-6 T 28-03-2018 IPR003137 PA domain APY29_RS03770 9ec46018db627943c70edc30c1afbb9f 231 Gene3D G3DSA:1.10.3720.10 15 231 1.7E-31 T 28-03-2018 APY29_RS03770 9ec46018db627943c70edc30c1afbb9f 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 56 231 1.7E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS03770 9ec46018db627943c70edc30c1afbb9f 231 SUPERFAMILY SSF161098 20 220 1.02E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS03915 12d0507ce71bddfc83f90219a0108265 447 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APY29_RS03915 12d0507ce71bddfc83f90219a0108265 447 SMART SM00382 174 317 1.8E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS03915 12d0507ce71bddfc83f90219a0108265 447 Gene3D G3DSA:1.10.10.60 404 444 2.4E-12 T 28-03-2018 APY29_RS03915 12d0507ce71bddfc83f90219a0108265 447 SMART SM00448 2 118 7.4E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS03915 12d0507ce71bddfc83f90219a0108265 447 Gene3D G3DSA:3.40.50.2300 1 152 5.3E-25 T 28-03-2018 APY29_RS03915 12d0507ce71bddfc83f90219a0108265 447 Pfam PF00158 Sigma-54 interaction domain 158 320 2.7E-63 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APY29_RS03915 12d0507ce71bddfc83f90219a0108265 447 Pfam PF00072 Response regulator receiver domain 4 118 1.0E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS03915 12d0507ce71bddfc83f90219a0108265 447 SUPERFAMILY SSF52540 156 387 2.02E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS03915 12d0507ce71bddfc83f90219a0108265 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 408 425 3.1E-8 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS03915 12d0507ce71bddfc83f90219a0108265 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 445 3.1E-8 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS03915 12d0507ce71bddfc83f90219a0108265 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site APY29_RS03915 12d0507ce71bddfc83f90219a0108265 447 Pfam PF02954 Bacterial regulatory protein, Fis family 407 442 2.5E-12 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS03915 12d0507ce71bddfc83f90219a0108265 447 SUPERFAMILY SSF52172 1 196 2.56E-30 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS03915 12d0507ce71bddfc83f90219a0108265 447 SUPERFAMILY SSF46689 359 444 1.12E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS03915 12d0507ce71bddfc83f90219a0108265 447 Gene3D G3DSA:3.40.50.300 153 326 1.1E-23 T 28-03-2018 APY29_RS03915 12d0507ce71bddfc83f90219a0108265 447 Gene3D G3DSA:1.10.8.60 327 390 9.4E-19 T 28-03-2018 APY29_RS02615 7008d282636b77375a3b8aa95f4c4b26 403 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS02615 7008d282636b77375a3b8aa95f4c4b26 403 Gene3D G3DSA:3.40.50.620 1 218 1.7E-62 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS02615 7008d282636b77375a3b8aa95f4c4b26 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.5E-25 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 APY29_RS02615 7008d282636b77375a3b8aa95f4c4b26 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.5E-25 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 APY29_RS02615 7008d282636b77375a3b8aa95f4c4b26 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.5E-25 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 APY29_RS02615 7008d282636b77375a3b8aa95f4c4b26 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.5E-25 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 APY29_RS02615 7008d282636b77375a3b8aa95f4c4b26 403 SUPERFAMILY SSF52374 4 314 7.93E-90 T 28-03-2018 APY29_RS02615 7008d282636b77375a3b8aa95f4c4b26 403 SMART SM00363 339 401 0.0031 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS02615 7008d282636b77375a3b8aa95f4c4b26 403 Gene3D G3DSA:1.10.240.10 219 311 2.0E-18 T 28-03-2018 APY29_RS02615 7008d282636b77375a3b8aa95f4c4b26 403 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 7 399 2.7E-110 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 APY29_RS02615 7008d282636b77375a3b8aa95f4c4b26 403 Gene3D G3DSA:3.10.290.10 312 403 3.7E-17 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS02615 7008d282636b77375a3b8aa95f4c4b26 403 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 400 46.163 T 28-03-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 APY29_RS02615 7008d282636b77375a3b8aa95f4c4b26 403 SUPERFAMILY SSF55174 332 400 3.66E-16 T 28-03-2018 APY29_RS02615 7008d282636b77375a3b8aa95f4c4b26 403 Pfam PF00579 tRNA synthetases class I (W and Y) 32 311 1.9E-72 T 28-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS10875 e10400a1d2eb411080f2c2bfad596687 274 Pfam PF00561 alpha/beta hydrolase fold 23 254 1.4E-24 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS10875 e10400a1d2eb411080f2c2bfad596687 274 SUPERFAMILY SSF53474 4 271 1.21E-64 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS10875 e10400a1d2eb411080f2c2bfad596687 274 Gene3D G3DSA:3.40.50.1820 2 274 3.0E-60 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS10875 e10400a1d2eb411080f2c2bfad596687 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 1.2E-10 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS10875 e10400a1d2eb411080f2c2bfad596687 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 1.2E-10 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS10875 e10400a1d2eb411080f2c2bfad596687 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 217 231 1.2E-10 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS10570 3108cf47ed4369a7dda8ebcc0bd2ad66 1055 Pfam PF06202 Amylo-alpha-1,6-glucosidase 611 711 9.4E-5 T 28-03-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 APY29_RS10570 3108cf47ed4369a7dda8ebcc0bd2ad66 1055 Gene3D G3DSA:2.60.120.430 7 189 4.5E-23 T 28-03-2018 APY29_RS10570 3108cf47ed4369a7dda8ebcc0bd2ad66 1055 SUPERFAMILY SSF48208 559 987 2.84E-46 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 APY29_RS10570 3108cf47ed4369a7dda8ebcc0bd2ad66 1055 Gene3D G3DSA:2.60.120.260 190 306 1.3E-16 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS10570 3108cf47ed4369a7dda8ebcc0bd2ad66 1055 Gene3D G3DSA:1.50.10.10 566 933 3.7E-29 T 28-03-2018 APY29_RS10570 3108cf47ed4369a7dda8ebcc0bd2ad66 1055 Pfam PF00754 F5/8 type C domain 200 301 9.6E-15 T 28-03-2018 IPR000421 Coagulation factor 5/8 C-terminal domain APY29_RS10570 3108cf47ed4369a7dda8ebcc0bd2ad66 1055 SUPERFAMILY SSF49785 26 180 3.57E-20 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS10570 3108cf47ed4369a7dda8ebcc0bd2ad66 1055 SUPERFAMILY SSF49785 187 297 8.51E-15 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS15340 009647c8a98969ca9002f36d9636eae7 344 Pfam PF03466 LysR substrate binding domain 89 296 8.1E-39 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS15340 009647c8a98969ca9002f36d9636eae7 344 Gene3D G3DSA:3.40.190.10 178 267 2.5E-13 T 28-03-2018 APY29_RS15340 009647c8a98969ca9002f36d9636eae7 344 Gene3D G3DSA:3.40.190.10 90 177 9.6E-12 T 28-03-2018 APY29_RS15340 009647c8a98969ca9002f36d9636eae7 344 SUPERFAMILY SSF53850 89 298 5.07E-41 T 28-03-2018 APY29_RS15340 009647c8a98969ca9002f36d9636eae7 344 SUPERFAMILY SSF46785 3 113 2.01E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS15340 009647c8a98969ca9002f36d9636eae7 344 Gene3D G3DSA:1.10.10.10 1 85 9.3E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS15340 009647c8a98969ca9002f36d9636eae7 344 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.2E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS02030 0ebccd68289f7fdfd5568a85f2c5878a 507 Gene3D G3DSA:2.40.180.10 20 375 2.3E-149 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS02030 0ebccd68289f7fdfd5568a85f2c5878a 507 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 351 359 - T 28-03-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS02030 0ebccd68289f7fdfd5568a85f2c5878a 507 PIRSF PIRSF038928 20 496 3.4E-174 T 28-03-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS02030 0ebccd68289f7fdfd5568a85f2c5878a 507 Pfam PF06628 Catalase-related immune-responsive 430 488 6.2E-13 T 28-03-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS02030 0ebccd68289f7fdfd5568a85f2c5878a 507 SUPERFAMILY SSF56634 23 495 1.83E-188 T 28-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS02030 0ebccd68289f7fdfd5568a85f2c5878a 507 SMART SM01060 28 408 1.7E-243 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS02030 0ebccd68289f7fdfd5568a85f2c5878a 507 PRINTS PR00067 Catalase signature 338 364 1.8E-67 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS02030 0ebccd68289f7fdfd5568a85f2c5878a 507 PRINTS PR00067 Catalase signature 103 121 1.8E-67 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS02030 0ebccd68289f7fdfd5568a85f2c5878a 507 PRINTS PR00067 Catalase signature 41 64 1.8E-67 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS02030 0ebccd68289f7fdfd5568a85f2c5878a 507 PRINTS PR00067 Catalase signature 306 333 1.8E-67 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS02030 0ebccd68289f7fdfd5568a85f2c5878a 507 PRINTS PR00067 Catalase signature 124 141 1.8E-67 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS02030 0ebccd68289f7fdfd5568a85f2c5878a 507 PRINTS PR00067 Catalase signature 143 161 1.8E-67 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS02030 0ebccd68289f7fdfd5568a85f2c5878a 507 Pfam PF00199 Catalase 28 405 2.0E-164 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS02030 0ebccd68289f7fdfd5568a85f2c5878a 507 ProSitePatterns PS00438 Catalase proximal active site signature. 64 80 - T 28-03-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS19145 fc6623f872245c96ad12ee035e0fc6d9 238 SMART SM00448 11 121 4.0E-41 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS19145 fc6623f872245c96ad12ee035e0fc6d9 238 SUPERFAMILY SSF52172 5 129 8.68E-40 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS19145 fc6623f872245c96ad12ee035e0fc6d9 238 SMART SM00862 157 233 4.1E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS19145 fc6623f872245c96ad12ee035e0fc6d9 238 Gene3D G3DSA:3.40.50.2300 3 131 8.2E-37 T 28-03-2018 APY29_RS19145 fc6623f872245c96ad12ee035e0fc6d9 238 SUPERFAMILY SSF46894 133 233 2.27E-23 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS19145 fc6623f872245c96ad12ee035e0fc6d9 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 6.8E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS19145 fc6623f872245c96ad12ee035e0fc6d9 238 Gene3D G3DSA:1.10.10.10 132 235 9.4E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS19145 fc6623f872245c96ad12ee035e0fc6d9 238 Pfam PF00072 Response regulator receiver domain 13 122 2.0E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS18095 9480c196224cdc45ee3b9b31fd98a241 121 SUPERFAMILY SSF54736 51 121 1.62E-23 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APY29_RS18095 9480c196224cdc45ee3b9b31fd98a241 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 121 6.0E-28 T 28-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS18095 9480c196224cdc45ee3b9b31fd98a241 121 Gene3D G3DSA:1.20.5.710 2 51 2.1E-17 T 28-03-2018 APY29_RS18095 9480c196224cdc45ee3b9b31fd98a241 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 121 1.7E-26 T 28-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS18095 9480c196224cdc45ee3b9b31fd98a241 121 Gene3D G3DSA:3.30.1390.10 52 121 8.7E-25 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APY29_RS18095 9480c196224cdc45ee3b9b31fd98a241 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 47 8.1E-18 T 28-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS18095 9480c196224cdc45ee3b9b31fd98a241 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 9.3E-43 T 28-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS18095 9480c196224cdc45ee3b9b31fd98a241 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 23.658 T 28-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS18095 9480c196224cdc45ee3b9b31fd98a241 121 SUPERFAMILY SSF48300 4 58 5.36E-16 T 28-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS04150 5759b436e11536cb3da6e3f19a16165b 428 Pfam PF00005 ABC transporter 42 174 2.9E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS04150 5759b436e11536cb3da6e3f19a16165b 428 Gene3D G3DSA:2.70.50.60 274 418 1.0E-27 T 28-03-2018 APY29_RS04150 5759b436e11536cb3da6e3f19a16165b 428 SUPERFAMILY SSF52540 37 234 5.42E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS04150 5759b436e11536cb3da6e3f19a16165b 428 Gene3D G3DSA:3.40.50.300 2 273 7.5E-43 T 28-03-2018 APY29_RS04150 5759b436e11536cb3da6e3f19a16165b 428 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS04150 5759b436e11536cb3da6e3f19a16165b 428 SMART SM00382 51 223 5.4E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS04150 5759b436e11536cb3da6e3f19a16165b 428 Pfam PF14524 Wzt C-terminal domain 278 419 6.9E-23 T 28-03-2018 IPR029439 Wzt, C-terminal APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1214 1232 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 SUPERFAMILY SSF51120 1185 1260 4.06E-16 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1346 1362 0.56 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 668 684 33.0 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 526 542 0.15 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1480 1497 0.0027 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 281 298 15.0 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 13 30 0.24 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 686 701 0.85 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 758 774 0.17 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 723 739 0.0024 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 562 575 0.93 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1190 1207 0.25 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1329 1345 0.43 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 908 925 0.025 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1208 1225 0.042 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 377 393 0.15 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 344 359 2.8 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 395 410 0.0084 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 927 942 1.6 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 176 189 1.0 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 119 134 0.16 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1227 1242 0.084 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 235 252 0.005 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 300 316 0.22 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 891 899 13.0 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 136 152 3.2 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 508 524 2.1 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 741 757 0.015 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 192 208 0.055 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 543 560 0.08 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 267 280 12.0 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 220 234 0.23 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 328 342 0.0071 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1498 1514 0.12 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 746 764 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 549 567 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 SUPERFAMILY SSF51120 646 729 2.88E-9 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 373 391 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 PRINTS PR00313 NodO calcium binding signature 236 244 4.5E-8 T 28-03-2018 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 PRINTS PR00313 NodO calcium binding signature 300 309 4.5E-8 T 28-03-2018 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 PRINTS PR00313 NodO calcium binding signature 180 191 4.5E-8 T 28-03-2018 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 PRINTS PR00313 NodO calcium binding signature 201 209 4.5E-8 T 28-03-2018 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF06594 Haemolysin-type calcium binding protein related domain 987 1029 1.7E-6 T 28-03-2018 IPR010566 Haemolysin-type calcium binding-related APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1139 1176 5.9E-7 T 28-03-2018 IPR010566 Haemolysin-type calcium binding-related APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Pfam PF06594 Haemolysin-type calcium binding protein related domain 820 864 8.1E-11 T 28-03-2018 IPR010566 Haemolysin-type calcium binding-related APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 382 400 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 SUPERFAMILY SSF51120 1080 1176 4.19E-5 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 SUPERFAMILY SSF51120 1275 1376 7.33E-11 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 SUPERFAMILY SSF51120 1438 1578 2.62E-23 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1477 1495 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 391 409 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 296 314 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 872 890 1.5E-5 T 28-03-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 1472 1493 1.5E-5 T 28-03-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1 19 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 SUPERFAMILY SSF51120 714 863 1.19E-23 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 540 558 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1334 1352 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 SUPERFAMILY SSF51120 860 1026 1.96E-19 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 SUPERFAMILY SSF51120 177 322 8.72E-18 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Gene3D G3DSA:2.60.120.10 748 801 0.016 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 SUPERFAMILY SSF51120 498 634 1.24E-22 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 SUPERFAMILY SSF51120 1 160 2.88E-15 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Gene3D G3DSA:2.150.10.10 470 649 2.0E-20 T 28-03-2018 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Gene3D G3DSA:2.150.10.10 218 260 2.4E-8 T 28-03-2018 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Gene3D G3DSA:2.150.10.10 327 364 2.1E-6 T 28-03-2018 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Gene3D G3DSA:2.150.10.10 1 59 5.7E-5 T 28-03-2018 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Gene3D G3DSA:2.150.10.10 365 469 2.4E-17 T 28-03-2018 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Gene3D G3DSA:2.150.10.10 802 1024 5.0E-20 T 28-03-2018 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Gene3D G3DSA:2.150.10.10 261 326 3.4E-10 T 28-03-2018 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Gene3D G3DSA:2.150.10.10 1262 1411 5.1E-11 T 28-03-2018 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Gene3D G3DSA:2.150.10.10 98 170 2.9E-8 T 28-03-2018 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Gene3D G3DSA:2.150.10.10 1166 1260 6.3E-16 T 28-03-2018 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Gene3D G3DSA:2.150.10.10 1420 1602 6.2E-24 T 28-03-2018 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Gene3D G3DSA:2.150.10.10 650 731 4.6E-11 T 28-03-2018 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Gene3D G3DSA:2.150.10.10 174 217 1.2E-6 T 28-03-2018 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 Gene3D G3DSA:2.150.10.10 1066 1165 0.023 T 28-03-2018 APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1495 1513 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1486 1504 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 SUPERFAMILY SSF51120 328 487 6.54E-22 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 737 755 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 10 28 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 188 206 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site APY29_RS04770 7d4d9822670752c14cafc3fa7618c574 1640 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 278 296 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site APY29_RS13165 62431a126bdab41e46b0f090979bb289 888 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 684 836 4.8E-51 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS13165 62431a126bdab41e46b0f090979bb289 888 SUPERFAMILY SSF58104 589 870 3.4E-70 T 28-03-2018 APY29_RS13165 62431a126bdab41e46b0f090979bb289 888 SMART SM00304 349 401 4.5E-4 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13165 62431a126bdab41e46b0f090979bb289 888 SMART SM00304 621 674 37.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13165 62431a126bdab41e46b0f090979bb289 888 SUPERFAMILY SSF158472 350 398 7.72E-7 T 28-03-2018 APY29_RS13165 62431a126bdab41e46b0f090979bb289 888 Gene3D G3DSA:3.30.450.20 182 327 1.2E-10 T 28-03-2018 APY29_RS13165 62431a126bdab41e46b0f090979bb289 888 Gene3D G3DSA:3.30.450.20 396 525 3.2E-9 T 28-03-2018 APY29_RS13165 62431a126bdab41e46b0f090979bb289 888 Gene3D G3DSA:1.10.287.950 674 873 1.9E-47 T 28-03-2018 APY29_RS13165 62431a126bdab41e46b0f090979bb289 888 Pfam PF17201 Cache 3/Cache 2 fusion domain 34 325 1.9E-76 T 28-03-2018 IPR033462 Cache 3/Cache 2 fusion domain APY29_RS13165 62431a126bdab41e46b0f090979bb289 888 SUPERFAMILY SSF103190 115 212 1.77E-12 T 28-03-2018 IPR029151 Periplasmic sensor domain-like APY29_RS13165 62431a126bdab41e46b0f090979bb289 888 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 797 826 7.4E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13165 62431a126bdab41e46b0f090979bb289 888 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 643 672 7.4E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13165 62431a126bdab41e46b0f090979bb289 888 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 749 778 7.4E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13165 62431a126bdab41e46b0f090979bb289 888 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 720 747 7.4E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13165 62431a126bdab41e46b0f090979bb289 888 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 332 357 7.4E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13165 62431a126bdab41e46b0f090979bb289 888 SMART SM00283 622 869 2.0E-86 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS13165 62431a126bdab41e46b0f090979bb289 888 Gene3D G3DSA:1.10.287.950 526 673 3.5E-13 T 28-03-2018 APY29_RS19560 9f905fc6bbd760512995ec545f06fa5b 146 SUPERFAMILY SSF52172 6 141 1.34E-29 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS19560 9f905fc6bbd760512995ec545f06fa5b 146 Pfam PF00072 Response regulator receiver domain 7 129 2.8E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS19560 9f905fc6bbd760512995ec545f06fa5b 146 Gene3D G3DSA:3.40.50.2300 2 144 2.1E-27 T 28-03-2018 APY29_RS19560 9f905fc6bbd760512995ec545f06fa5b 146 SMART SM00448 5 129 8.7E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS19035 dc70b4bb816fd8af438dc739f9995191 318 Gene3D G3DSA:3.30.470.20 184 318 1.6E-36 T 28-03-2018 APY29_RS19035 dc70b4bb816fd8af438dc739f9995191 318 SUPERFAMILY SSF56059 112 315 2.42E-54 T 28-03-2018 APY29_RS19035 dc70b4bb816fd8af438dc739f9995191 318 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 79 90 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS19035 dc70b4bb816fd8af438dc739f9995191 318 Gene3D G3DSA:3.30.1490.20 127 183 9.2E-19 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APY29_RS19035 dc70b4bb816fd8af438dc739f9995191 318 Pfam PF01820 D-ala D-ala ligase N-terminus 18 102 1.9E-15 T 28-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS19035 dc70b4bb816fd8af438dc739f9995191 318 Gene3D G3DSA:3.40.50.20 8 122 2.5E-30 T 28-03-2018 APY29_RS19035 dc70b4bb816fd8af438dc739f9995191 318 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 17 318 35.209 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS19035 dc70b4bb816fd8af438dc739f9995191 318 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 259 288 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS19035 dc70b4bb816fd8af438dc739f9995191 318 PIRSF PIRSF039102 16 57 4.1E-8 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS19035 dc70b4bb816fd8af438dc739f9995191 318 PIRSF PIRSF039102 56 318 6.6E-83 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS19035 dc70b4bb816fd8af438dc739f9995191 318 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 18 317 1.9E-104 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS19035 dc70b4bb816fd8af438dc739f9995191 318 SUPERFAMILY SSF52440 18 112 4.6E-26 T 28-03-2018 IPR016185 Pre-ATP-grasp domain APY29_RS19035 dc70b4bb816fd8af438dc739f9995191 318 Pfam PF07478 D-ala D-ala ligase C-terminus 120 314 1.3E-55 T 28-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS08730 f6dc1cd846f0dcdb2d2a582fec51a57e 157 Pfam PF03840 Preprotein translocase SecG subunit 5 72 7.3E-19 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APY29_RS08730 f6dc1cd846f0dcdb2d2a582fec51a57e 157 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 73 4.5E-22 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APY29_RS08730 f6dc1cd846f0dcdb2d2a582fec51a57e 157 PRINTS PR01651 Protein-export SecG membrane protein signature 24 38 4.6E-35 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APY29_RS08730 f6dc1cd846f0dcdb2d2a582fec51a57e 157 PRINTS PR01651 Protein-export SecG membrane protein signature 4 24 4.6E-35 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APY29_RS08730 f6dc1cd846f0dcdb2d2a582fec51a57e 157 PRINTS PR01651 Protein-export SecG membrane protein signature 39 55 4.6E-35 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APY29_RS08730 f6dc1cd846f0dcdb2d2a582fec51a57e 157 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 4.6E-35 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APY29_RS10865 545d904990e7ab59f0a6bf4a01acd1ac 155 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 93 148 5.0E-13 T 28-03-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 APY29_RS10865 545d904990e7ab59f0a6bf4a01acd1ac 155 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 36 90 3.9E-12 T 28-03-2018 IPR022687 DTXR-type HTH domain GO:0003677 APY29_RS10865 545d904990e7ab59f0a6bf4a01acd1ac 155 Gene3D G3DSA:1.10.60.10 93 147 1.3E-18 T 28-03-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 APY29_RS10865 545d904990e7ab59f0a6bf4a01acd1ac 155 Gene3D G3DSA:1.10.10.10 22 92 2.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS10865 545d904990e7ab59f0a6bf4a01acd1ac 155 SUPERFAMILY SSF46785 47 121 2.99E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS10865 545d904990e7ab59f0a6bf4a01acd1ac 155 SMART SM00529 54 152 1.8E-31 T 28-03-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 APY29_RS16735 8436f426bbd6f55897b3d8bf5a0da7d1 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 223 6.9E-41 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APY29_RS16735 8436f426bbd6f55897b3d8bf5a0da7d1 256 SUPERFAMILY SSF52096 8 229 3.27E-48 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS16735 8436f426bbd6f55897b3d8bf5a0da7d1 256 Gene3D G3DSA:3.90.226.10 1 256 6.0E-47 T 28-03-2018 APY29_RS05530 45f6b352753bfd5408e1dd5a5ac4d87a 391 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 388 38.423 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05530 45f6b352753bfd5408e1dd5a5ac4d87a 391 Gene3D G3DSA:3.40.50.1260 3 174 1.4E-58 T 28-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05530 45f6b352753bfd5408e1dd5a5ac4d87a 391 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 28-03-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05530 45f6b352753bfd5408e1dd5a5ac4d87a 391 Pfam PF00162 Phosphoglycerate kinase 6 378 4.7E-141 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05530 45f6b352753bfd5408e1dd5a5ac4d87a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 308 333 2.2E-81 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05530 45f6b352753bfd5408e1dd5a5ac4d87a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 341 352 2.2E-81 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05530 45f6b352753bfd5408e1dd5a5ac4d87a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.2E-81 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05530 45f6b352753bfd5408e1dd5a5ac4d87a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 364 381 2.2E-81 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05530 45f6b352753bfd5408e1dd5a5ac4d87a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.2E-81 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05530 45f6b352753bfd5408e1dd5a5ac4d87a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.2E-81 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05530 45f6b352753bfd5408e1dd5a5ac4d87a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.2E-81 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05530 45f6b352753bfd5408e1dd5a5ac4d87a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.2E-81 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05530 45f6b352753bfd5408e1dd5a5ac4d87a 391 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.2E-81 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05530 45f6b352753bfd5408e1dd5a5ac4d87a 391 SUPERFAMILY SSF53748 3 387 9.42E-145 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05530 45f6b352753bfd5408e1dd5a5ac4d87a 391 PIRSF PIRSF000724 1 391 4.1E-133 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05530 45f6b352753bfd5408e1dd5a5ac4d87a 391 Gene3D G3DSA:3.40.50.1260 175 376 1.7E-79 T 28-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS09810 1264da8508c5f851480a8d78b87252b6 377 Pfam PF00005 ABC transporter 36 177 2.0E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS09810 1264da8508c5f851480a8d78b87252b6 377 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS09810 1264da8508c5f851480a8d78b87252b6 377 SMART SM00382 44 232 7.6E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS09810 1264da8508c5f851480a8d78b87252b6 377 Pfam PF08402 TOBE domain 296 375 4.7E-20 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APY29_RS09810 1264da8508c5f851480a8d78b87252b6 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 375 2.4E-124 T 28-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 APY29_RS09810 1264da8508c5f851480a8d78b87252b6 377 SUPERFAMILY SSF50331 253 375 7.23E-15 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal APY29_RS09810 1264da8508c5f851480a8d78b87252b6 377 Gene3D G3DSA:3.40.50.300 16 259 3.0E-74 T 28-03-2018 APY29_RS09810 1264da8508c5f851480a8d78b87252b6 377 Gene3D G3DSA:2.40.50.140 298 367 1.0E-5 T 28-03-2018 APY29_RS09810 1264da8508c5f851480a8d78b87252b6 377 SUPERFAMILY SSF52540 20 257 2.08E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS08130 e3c41d824318d8aeca9c916e45136367 395 SUPERFAMILY SSF47384 159 241 5.1E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS08130 e3c41d824318d8aeca9c916e45136367 395 SMART SM00304 121 175 1.0E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS08130 e3c41d824318d8aeca9c916e45136367 395 Gene3D G3DSA:3.30.565.10 234 355 1.5E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS08130 e3c41d824318d8aeca9c916e45136367 395 Pfam PF00512 His Kinase A (phospho-acceptor) domain 178 236 2.6E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS08130 e3c41d824318d8aeca9c916e45136367 395 SMART SM00388 176 240 2.7E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS08130 e3c41d824318d8aeca9c916e45136367 395 Gene3D G3DSA:1.10.287.130 166 233 3.5E-12 T 28-03-2018 APY29_RS08130 e3c41d824318d8aeca9c916e45136367 395 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 286 347 3.5E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS08130 e3c41d824318d8aeca9c916e45136367 395 SUPERFAMILY SSF55874 230 353 6.29E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS08130 e3c41d824318d8aeca9c916e45136367 395 SUPERFAMILY SSF158472 124 172 3.92E-5 T 28-03-2018 APY29_RS19850 4096d92262a8ffea0041568c0c7cf37b 697 Gene3D G3DSA:2.130.10.120 76 411 2.9E-24 T 28-03-2018 APY29_RS19850 4096d92262a8ffea0041568c0c7cf37b 697 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 26 246 1.9E-26 T 28-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 APY29_RS19850 4096d92262a8ffea0041568c0c7cf37b 697 Gene3D G3DSA:3.40.50.1820 412 697 3.2E-55 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS19850 4096d92262a8ffea0041568c0c7cf37b 697 SUPERFAMILY SSF53474 440 695 1.46E-51 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS19850 4096d92262a8ffea0041568c0c7cf37b 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 555 575 3.0E-41 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APY29_RS19850 4096d92262a8ffea0041568c0c7cf37b 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 609 624 3.0E-41 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APY29_RS19850 4096d92262a8ffea0041568c0c7cf37b 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 628 650 3.0E-41 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APY29_RS19850 4096d92262a8ffea0041568c0c7cf37b 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 470 488 3.0E-41 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APY29_RS19850 4096d92262a8ffea0041568c0c7cf37b 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 497 521 3.0E-41 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APY29_RS19850 4096d92262a8ffea0041568c0c7cf37b 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 525 544 3.0E-41 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APY29_RS19850 4096d92262a8ffea0041568c0c7cf37b 697 Pfam PF00326 Prolyl oligopeptidase family 495 695 2.6E-47 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APY29_RS19850 4096d92262a8ffea0041568c0c7cf37b 697 SUPERFAMILY SSF50993 27 434 1.05E-58 T 28-03-2018 APY29_RS00680 fdffdae102460c5e6aa553fb45e5b026 400 Pfam PF00155 Aminotransferase class I and II 29 394 2.0E-78 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APY29_RS00680 fdffdae102460c5e6aa553fb45e5b026 400 SUPERFAMILY SSF53383 2 396 1.0E-112 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS00680 fdffdae102460c5e6aa553fb45e5b026 400 PRINTS PR00799 Aspartate aminotransferase signature 276 301 2.2E-35 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APY29_RS00680 fdffdae102460c5e6aa553fb45e5b026 400 PRINTS PR00799 Aspartate aminotransferase signature 208 220 2.2E-35 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APY29_RS00680 fdffdae102460c5e6aa553fb45e5b026 400 PRINTS PR00799 Aspartate aminotransferase signature 177 196 2.2E-35 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APY29_RS00680 fdffdae102460c5e6aa553fb45e5b026 400 PRINTS PR00799 Aspartate aminotransferase signature 343 361 2.2E-35 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APY29_RS00680 fdffdae102460c5e6aa553fb45e5b026 400 Gene3D G3DSA:3.90.1150.10 2 85 3.1E-18 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS00680 fdffdae102460c5e6aa553fb45e5b026 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 246 259 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 APY29_RS00680 fdffdae102460c5e6aa553fb45e5b026 400 Gene3D G3DSA:3.90.1150.10 310 398 9.2E-26 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS00680 fdffdae102460c5e6aa553fb45e5b026 400 Gene3D G3DSA:3.40.640.10 86 309 3.7E-29 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS16440 d26ac4c25b29e275b49896db25e837e1 789 SUPERFAMILY SSF56935 54 643 1.83E-109 T 28-03-2018 APY29_RS16440 d26ac4c25b29e275b49896db25e837e1 789 SUPERFAMILY SSF56935 673 788 1.83E-109 T 28-03-2018 APY29_RS16440 d26ac4c25b29e275b49896db25e837e1 789 Gene3D G3DSA:2.40.170.20 202 788 3.0E-71 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS16440 d26ac4c25b29e275b49896db25e837e1 789 Pfam PF00593 TonB dependent receptor 324 787 8.3E-38 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS16440 d26ac4c25b29e275b49896db25e837e1 789 Pfam PF07715 TonB-dependent Receptor Plug Domain 78 189 3.9E-12 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS16440 d26ac4c25b29e275b49896db25e837e1 789 Gene3D G3DSA:2.170.130.10 55 201 1.8E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS16440 d26ac4c25b29e275b49896db25e837e1 789 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 72 - T 28-03-2018 IPR010916 TonB box, conserved site APY29_RS04280 98b41e2543c811e7d144349729b7c2fc 549 SUPERFAMILY SSF51905 313 408 2.87E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS04280 98b41e2543c811e7d144349729b7c2fc 549 SUPERFAMILY SSF51905 18 217 2.87E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS04280 98b41e2543c811e7d144349729b7c2fc 549 Gene3D G3DSA:3.50.50.60 7 434 5.0E-43 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS04280 98b41e2543c811e7d144349729b7c2fc 549 SUPERFAMILY SSF54373 218 311 2.39E-31 T 28-03-2018 APY29_RS04280 98b41e2543c811e7d144349729b7c2fc 549 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 447 547 2.0E-43 T 28-03-2018 APY29_RS04280 98b41e2543c811e7d144349729b7c2fc 549 Pfam PF01946 Thi4 family 17 64 5.6E-7 T 28-03-2018 APY29_RS04280 98b41e2543c811e7d144349729b7c2fc 549 Gene3D G3DSA:3.30.70.20 449 541 1.3E-4 T 28-03-2018 APY29_RS04280 98b41e2543c811e7d144349729b7c2fc 549 SUPERFAMILY SSF54862 450 548 2.2E-24 T 28-03-2018 APY29_RS17195 75d638889816d81fea1d513e5ba9937b 958 Gene3D G3DSA:1.20.1000.10 596 949 2.0E-13 T 28-03-2018 APY29_RS17195 75d638889816d81fea1d513e5ba9937b 958 Pfam PF00176 SNF2 family N-terminal domain 8 262 2.9E-34 T 28-03-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 APY29_RS17195 75d638889816d81fea1d513e5ba9937b 958 SUPERFAMILY SSF52540 393 445 1.22E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17195 75d638889816d81fea1d513e5ba9937b 958 SUPERFAMILY SSF52540 474 590 1.22E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17195 75d638889816d81fea1d513e5ba9937b 958 SUPERFAMILY SSF52540 157 217 1.22E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17195 75d638889816d81fea1d513e5ba9937b 958 Pfam PF00271 Helicase conserved C-terminal domain 439 546 3.4E-18 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS17195 75d638889816d81fea1d513e5ba9937b 958 SMART SM00490 467 546 1.0E-21 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS17195 75d638889816d81fea1d513e5ba9937b 958 SUPERFAMILY SSF52540 31 234 4.55E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17195 75d638889816d81fea1d513e5ba9937b 958 SMART SM00487 36 231 1.5E-24 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APY29_RS17195 75d638889816d81fea1d513e5ba9937b 958 Gene3D G3DSA:3.40.50.300 365 585 2.1E-27 T 28-03-2018 APY29_RS17195 75d638889816d81fea1d513e5ba9937b 958 Gene3D G3DSA:3.40.50.10810 1 262 2.6E-38 T 28-03-2018 APY29_RS17695 7dd6713168258b6234ec2fcdd3579ee9 180 Pfam PF01569 PAP2 superfamily 68 173 1.2E-19 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APY29_RS17695 7dd6713168258b6234ec2fcdd3579ee9 180 SMART SM00014 63 172 1.8E-14 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APY29_RS17695 7dd6713168258b6234ec2fcdd3579ee9 180 SUPERFAMILY SSF48317 12 173 7.19E-35 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APY29_RS17695 7dd6713168258b6234ec2fcdd3579ee9 180 Gene3D G3DSA:1.20.144.10 10 174 5.2E-24 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APY29_RS10860 e1beee838e5115673df9b0685c4d80d9 169 Gene3D G3DSA:3.40.140.10 7 168 8.2E-52 T 28-03-2018 APY29_RS10860 e1beee838e5115673df9b0685c4d80d9 169 SUPERFAMILY SSF53927 12 162 3.35E-55 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 APY29_RS10860 e1beee838e5115673df9b0685c4d80d9 169 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 17 114 4.2E-28 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain APY29_RS10860 e1beee838e5115673df9b0685c4d80d9 169 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 66 103 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APY29_RS10860 e1beee838e5115673df9b0685c4d80d9 169 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 19 162 47.267 T 28-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 APY29_RS13735 5e93c4ace4c5c2d4163a354c6120af3c 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 122 2.0E-64 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 APY29_RS13735 5e93c4ace4c5c2d4163a354c6120af3c 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 67.888 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 APY29_RS13735 5e93c4ace4c5c2d4163a354c6120af3c 126 PIRSF PIRSF006246 1 126 5.1E-48 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 APY29_RS13735 5e93c4ace4c5c2d4163a354c6120af3c 126 SUPERFAMILY SSF50692 1 121 3.85E-46 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain APY29_RS13735 5e93c4ace4c5c2d4163a354c6120af3c 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 125 9.5E-49 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 APY29_RS13735 5e93c4ace4c5c2d4163a354c6120af3c 126 Gene3D G3DSA:2.40.40.20 1 117 1.1E-49 T 28-03-2018 APY29_RS13735 5e93c4ace4c5c2d4163a354c6120af3c 126 Pfam PF02261 Aspartate decarboxylase 1 114 2.0E-47 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 APY29_RS10110 2722d2d7b17304727aa85a0ab7b7d558 182 PIRSF PIRSF011484 1 180 3.8E-63 T 28-03-2018 IPR009822 YaeQ APY29_RS10110 2722d2d7b17304727aa85a0ab7b7d558 182 Gene3D G3DSA:3.10.640.10 2 177 6.6E-75 T 28-03-2018 APY29_RS10110 2722d2d7b17304727aa85a0ab7b7d558 182 SMART SM01322 1 176 4.1E-109 T 28-03-2018 IPR009822 YaeQ APY29_RS10110 2722d2d7b17304727aa85a0ab7b7d558 182 SUPERFAMILY SSF52980 5 178 4.83E-68 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 APY29_RS10110 2722d2d7b17304727aa85a0ab7b7d558 182 Pfam PF07152 YaeQ protein 1 173 5.2E-71 T 28-03-2018 IPR009822 YaeQ APY29_RS02595 4f51277d4d3cd91029ef437a222cb699 406 Gene3D G3DSA:1.20.1250.20 1 194 5.7E-19 T 28-03-2018 APY29_RS02595 4f51277d4d3cd91029ef437a222cb699 406 SUPERFAMILY SSF103473 4 402 4.45E-35 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS02595 4f51277d4d3cd91029ef437a222cb699 406 Gene3D G3DSA:1.20.1250.20 198 404 5.2E-14 T 28-03-2018 APY29_RS02595 4f51277d4d3cd91029ef437a222cb699 406 Pfam PF07690 Major Facilitator Superfamily 24 357 1.3E-21 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS12145 0c863bb84e2ba75b2027bc643d276c10 424 SUPERFAMILY SSF63882 6 184 5.63E-46 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 APY29_RS12145 0c863bb84e2ba75b2027bc643d276c10 424 SUPERFAMILY SSF53218 185 333 4.19E-33 T 28-03-2018 IPR001453 MoaB/Mog domain APY29_RS12145 0c863bb84e2ba75b2027bc643d276c10 424 Gene3D G3DSA:2.40.340.10 339 409 9.8E-8 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 APY29_RS12145 0c863bb84e2ba75b2027bc643d276c10 424 Gene3D G3DSA:2.170.190.11 65 149 8.5E-26 T 28-03-2018 APY29_RS12145 0c863bb84e2ba75b2027bc643d276c10 424 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 263 297 - T 28-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 APY29_RS12145 0c863bb84e2ba75b2027bc643d276c10 424 Gene3D G3DSA:3.40.980.10 158 338 6.1E-46 T 28-03-2018 IPR001453 MoaB/Mog domain APY29_RS12145 0c863bb84e2ba75b2027bc643d276c10 424 SMART SM00852 188 329 2.9E-30 T 28-03-2018 IPR001453 MoaB/Mog domain APY29_RS12145 0c863bb84e2ba75b2027bc643d276c10 424 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 175 1.3E-39 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 APY29_RS12145 0c863bb84e2ba75b2027bc643d276c10 424 Pfam PF00994 Probable molybdopterin binding domain 188 328 2.4E-25 T 28-03-2018 IPR001453 MoaB/Mog domain APY29_RS12145 0c863bb84e2ba75b2027bc643d276c10 424 SUPERFAMILY SSF63867 339 414 5.89E-7 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 APY29_RS12145 0c863bb84e2ba75b2027bc643d276c10 424 Gene3D G3DSA:3.90.105.10 27 64 1.8E-9 T 28-03-2018 APY29_RS12145 0c863bb84e2ba75b2027bc643d276c10 424 Pfam PF03454 MoeA C-terminal region (domain IV) 341 408 8.5E-5 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 APY29_RS16310 76cda83fb1feace71122f8d6d1f2f003 748 Gene3D G3DSA:1.10.520.10 453 614 1.5E-44 T 28-03-2018 APY29_RS16310 76cda83fb1feace71122f8d6d1f2f003 748 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 271 281 - T 28-03-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 APY29_RS16310 76cda83fb1feace71122f8d6d1f2f003 748 Pfam PF00141 Peroxidase 68 407 7.6E-48 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APY29_RS16310 76cda83fb1feace71122f8d6d1f2f003 748 Pfam PF00141 Peroxidase 414 721 4.4E-40 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APY29_RS16310 76cda83fb1feace71122f8d6d1f2f003 748 Gene3D G3DSA:1.10.420.10 615 723 1.4E-36 T 28-03-2018 APY29_RS16310 76cda83fb1feace71122f8d6d1f2f003 748 Gene3D G3DSA:1.10.420.10 245 409 1.5E-40 T 28-03-2018 APY29_RS16310 76cda83fb1feace71122f8d6d1f2f003 748 PRINTS PR00458 Haem peroxidase superfamily signature 162 174 1.2E-12 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APY29_RS16310 76cda83fb1feace71122f8d6d1f2f003 748 PRINTS PR00458 Haem peroxidase superfamily signature 84 98 1.2E-12 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APY29_RS16310 76cda83fb1feace71122f8d6d1f2f003 748 PRINTS PR00458 Haem peroxidase superfamily signature 144 161 1.2E-12 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APY29_RS16310 76cda83fb1feace71122f8d6d1f2f003 748 PRINTS PR00458 Haem peroxidase superfamily signature 330 345 1.2E-12 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APY29_RS16310 76cda83fb1feace71122f8d6d1f2f003 748 SUPERFAMILY SSF48113 442 747 3.98E-117 T 28-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 APY29_RS16310 76cda83fb1feace71122f8d6d1f2f003 748 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 492 518 2.0E-55 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APY29_RS16310 76cda83fb1feace71122f8d6d1f2f003 748 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 20 42 2.0E-55 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APY29_RS16310 76cda83fb1feace71122f8d6d1f2f003 748 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 61 86 2.0E-55 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APY29_RS16310 76cda83fb1feace71122f8d6d1f2f003 748 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 46 59 2.0E-55 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APY29_RS16310 76cda83fb1feace71122f8d6d1f2f003 748 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 279 302 2.0E-55 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APY29_RS16310 76cda83fb1feace71122f8d6d1f2f003 748 Gene3D G3DSA:1.10.520.10 16 199 2.5E-54 T 28-03-2018 APY29_RS16310 76cda83fb1feace71122f8d6d1f2f003 748 SUPERFAMILY SSF48113 16 440 9.9E-148 T 28-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 APY29_RS16310 76cda83fb1feace71122f8d6d1f2f003 748 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 6 747 0.0 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APY29_RS16310 76cda83fb1feace71122f8d6d1f2f003 748 Hamap MF_01961 Catalase-peroxidase [katG]. 2 748 42.569 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APY29_RS16310 76cda83fb1feace71122f8d6d1f2f003 748 ProSitePatterns PS00436 Peroxidases active site signature. 84 95 - T 28-03-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 APY29_RS23245 7a9e12d9466cfca9925218cb0ee14abd 206 Gene3D G3DSA:3.40.30.10 2 94 7.2E-27 T 28-03-2018 APY29_RS23245 7a9e12d9466cfca9925218cb0ee14abd 206 Pfam PF13410 Glutathione S-transferase, C-terminal domain 126 190 1.0E-6 T 28-03-2018 APY29_RS23245 7a9e12d9466cfca9925218cb0ee14abd 206 SUPERFAMILY SSF52833 1 84 1.36E-21 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS23245 7a9e12d9466cfca9925218cb0ee14abd 206 SUPERFAMILY SSF47616 80 201 3.2E-27 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like APY29_RS23245 7a9e12d9466cfca9925218cb0ee14abd 206 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 77 2.7E-14 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APY29_RS23245 7a9e12d9466cfca9925218cb0ee14abd 206 Gene3D G3DSA:1.20.1050.10 95 204 2.1E-23 T 28-03-2018 APY29_RS23115 6e716354050f4c47271d61d762097fb2 599 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 38 596 5.5E-258 T 28-03-2018 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 APY29_RS23115 6e716354050f4c47271d61d762097fb2 599 SUPERFAMILY SSF75304 70 447 8.37E-108 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APY29_RS23115 6e716354050f4c47271d61d762097fb2 599 Gene3D G3DSA:3.90.1300.10 2 466 5.9E-108 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APY29_RS23115 6e716354050f4c47271d61d762097fb2 599 Gene3D G3DSA:3.10.490.10 470 599 1.8E-24 T 28-03-2018 APY29_RS23115 6e716354050f4c47271d61d762097fb2 599 Pfam PF01425 Amidase 68 437 4.0E-83 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APY29_RS18855 2bd854faff2c4d121fad58a2ff29898e 366 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 182 4.2E-27 T 28-03-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase APY29_RS16225 8426eb6187c989fbe87edcdbd658679e 461 Pfam PF13560 Helix-turn-helix domain 11 64 7.2E-12 T 28-03-2018 APY29_RS16225 8426eb6187c989fbe87edcdbd658679e 461 SUPERFAMILY SSF47413 6 64 8.45E-13 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APY29_RS16225 8426eb6187c989fbe87edcdbd658679e 461 PIRSF PIRSF019251 6 457 1.0E-152 T 28-03-2018 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 APY29_RS16225 8426eb6187c989fbe87edcdbd658679e 461 Pfam PF06114 IrrE N-terminal-like domain 190 312 1.2E-20 T 28-03-2018 IPR010359 IrrE N-terminal-like domain APY29_RS16225 8426eb6187c989fbe87edcdbd658679e 461 Gene3D G3DSA:1.10.260.40 2 82 2.0E-15 T 28-03-2018 APY29_RS16225 8426eb6187c989fbe87edcdbd658679e 461 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 313 454 2.5E-61 T 28-03-2018 IPR018653 Domain of unknown function DUF2083,transcriptional regulator APY29_RS16225 8426eb6187c989fbe87edcdbd658679e 461 SMART SM00530 15 69 7.1E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APY29_RS04005 ad34e25c6f500533795987a4c255f426 674 Pfam PF01432 Peptidase family M3 224 671 2.4E-142 T 28-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 APY29_RS04005 ad34e25c6f500533795987a4c255f426 674 Gene3D G3DSA:1.20.1050.40 6 137 7.5E-34 T 28-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal APY29_RS04005 ad34e25c6f500533795987a4c255f426 674 Gene3D G3DSA:1.10.1370.10 139 431 1.0E-54 T 28-03-2018 APY29_RS04005 ad34e25c6f500533795987a4c255f426 674 Gene3D G3DSA:1.10.1370.10 455 674 6.2E-63 T 28-03-2018 APY29_RS04005 ad34e25c6f500533795987a4c255f426 674 SUPERFAMILY SSF55486 1 671 3.87E-192 T 28-03-2018 APY29_RS05940 56c975cae2030a106368483d37fc8e42 389 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 41.806 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 APY29_RS05940 56c975cae2030a106368483d37fc8e42 389 SUPERFAMILY SSF52210 239 385 3.4E-53 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 APY29_RS05940 56c975cae2030a106368483d37fc8e42 389 Gene3D G3DSA:3.40.50.261 240 385 1.1E-43 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 APY29_RS05940 56c975cae2030a106368483d37fc8e42 389 Pfam PF00549 CoA-ligase 262 382 4.3E-26 T 28-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 APY29_RS05940 56c975cae2030a106368483d37fc8e42 389 Gene3D G3DSA:3.30.1490.20 36 101 9.4E-23 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APY29_RS05940 56c975cae2030a106368483d37fc8e42 389 Pfam PF08442 ATP-grasp domain 2 202 7.5E-73 T 28-03-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 APY29_RS05940 56c975cae2030a106368483d37fc8e42 389 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 28-03-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 APY29_RS05940 56c975cae2030a106368483d37fc8e42 389 Gene3D G3DSA:3.40.50.261 3 35 0.067 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 APY29_RS05940 56c975cae2030a106368483d37fc8e42 389 PIRSF PIRSF001554 1 388 3.1E-147 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 APY29_RS05940 56c975cae2030a106368483d37fc8e42 389 SUPERFAMILY SSF56059 1 238 1.33E-75 T 28-03-2018 APY29_RS05940 56c975cae2030a106368483d37fc8e42 389 Gene3D G3DSA:3.30.470.20 102 239 5.3E-48 T 28-03-2018 APY29_RS05940 56c975cae2030a106368483d37fc8e42 389 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 5.3E-157 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 APY29_RS04160 4b92cfbb33ad9dcdd41ff3af564cf546 838 Pfam PF13579 Glycosyl transferase 4-like domain 18 186 8.6E-11 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 APY29_RS04160 4b92cfbb33ad9dcdd41ff3af564cf546 838 Gene3D G3DSA:3.40.50.2000 217 388 2.6E-38 T 28-03-2018 APY29_RS04160 4b92cfbb33ad9dcdd41ff3af564cf546 838 SUPERFAMILY SSF53756 16 403 8.07E-65 T 28-03-2018 APY29_RS04160 4b92cfbb33ad9dcdd41ff3af564cf546 838 Pfam PF00534 Glycosyl transferases group 1 224 377 1.5E-28 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 APY29_RS04160 4b92cfbb33ad9dcdd41ff3af564cf546 838 Pfam PF00534 Glycosyl transferases group 1 655 796 1.6E-21 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 APY29_RS04160 4b92cfbb33ad9dcdd41ff3af564cf546 838 Gene3D G3DSA:3.40.50.2000 17 216 3.9E-9 T 28-03-2018 APY29_RS04160 4b92cfbb33ad9dcdd41ff3af564cf546 838 SUPERFAMILY SSF53756 456 814 5.93E-39 T 28-03-2018 APY29_RS04160 4b92cfbb33ad9dcdd41ff3af564cf546 838 Gene3D G3DSA:3.40.50.2000 637 807 2.5E-25 T 28-03-2018 APY29_RS06505 9e082b2bccfd55420d41e702bdfc46c9 92 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 10 90 3.5E-30 T 28-03-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 APY29_RS06505 9e082b2bccfd55420d41e702bdfc46c9 92 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 26 90 6.4E-15 T 28-03-2018 IPR008792 Coenzyme PQQ synthesis D APY29_RS06505 9e082b2bccfd55420d41e702bdfc46c9 92 Hamap MF_00655 Coenzyme PQQ synthesis protein D [pqqD]. 4 92 22.369 T 28-03-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 APY29_RS17295 e6d93f089fc649d59a9f7f94f45e50ab 995 Gene3D G3DSA:2.40.170.20 235 992 7.3E-66 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS17295 e6d93f089fc649d59a9f7f94f45e50ab 995 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 96 992 9.7E-212 T 28-03-2018 IPR010104 Bacterial TonB-dependent receptor APY29_RS17295 e6d93f089fc649d59a9f7f94f45e50ab 995 Pfam PF07715 TonB-dependent Receptor Plug Domain 115 233 2.9E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS17295 e6d93f089fc649d59a9f7f94f45e50ab 995 SUPERFAMILY SSF56935 86 307 6.59E-79 T 28-03-2018 APY29_RS17295 e6d93f089fc649d59a9f7f94f45e50ab 995 SUPERFAMILY SSF56935 348 472 6.59E-79 T 28-03-2018 APY29_RS17295 e6d93f089fc649d59a9f7f94f45e50ab 995 SUPERFAMILY SSF56935 754 992 6.59E-79 T 28-03-2018 APY29_RS17295 e6d93f089fc649d59a9f7f94f45e50ab 995 SUPERFAMILY SSF56935 612 727 6.59E-79 T 28-03-2018 APY29_RS17295 e6d93f089fc649d59a9f7f94f45e50ab 995 SUPERFAMILY SSF56935 505 568 6.59E-79 T 28-03-2018 APY29_RS17295 e6d93f089fc649d59a9f7f94f45e50ab 995 Pfam PF00593 TonB dependent receptor 485 992 7.9E-34 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS17295 e6d93f089fc649d59a9f7f94f45e50ab 995 Gene3D G3DSA:2.170.130.10 89 234 1.8E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 9 320 9.0E-121 T 28-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 Gene3D G3DSA:3.40.50.10190 758 829 6.7E-15 T 28-03-2018 IPR001357 BRCT domain APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 324 398 2.5E-33 T 28-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 752 824 1.1E-12 T 28-03-2018 IPR001357 BRCT domain APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 SUPERFAMILY SSF52113 750 826 5.98E-18 T 28-03-2018 IPR001357 BRCT domain APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 SUPERFAMILY SSF56091 7 318 2.06E-113 T 28-03-2018 APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 Hamap MF_01588 DNA ligase [ligA]. 5 826 51.835 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 SMART SM00532 6 450 8.1E-251 T 28-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 Gene3D G3DSA:2.40.50.140 319 392 9.7E-33 T 28-03-2018 APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 SUPERFAMILY SSF47781 662 730 5.4E-8 T 28-03-2018 IPR010994 RuvA domain 2-like APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 Gene3D G3DSA:1.10.287.610 2 69 4.5E-25 T 28-03-2018 APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 SUPERFAMILY SSF50249 320 402 2.4E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 Pfam PF12826 Helix-hairpin-helix motif 577 640 1.4E-13 T 28-03-2018 APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 PIRSF PIRSF001604 659 830 6.4E-27 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 PIRSF PIRSF001604 1 664 5.3E-202 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 Gene3D G3DSA:3.30.470.30 121 254 1.3E-51 T 28-03-2018 APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 14 492 9.3E-189 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 Gene3D G3DSA:1.10.150.20 573 653 1.8E-19 T 28-03-2018 APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 SMART SM00292 752 829 1.7E-11 T 28-03-2018 IPR001357 BRCT domain APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 SUPERFAMILY SSF47781 406 492 1.15E-48 T 28-03-2018 IPR010994 RuvA domain 2-like APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 SUPERFAMILY SSF47781 558 649 1.15E-48 T 28-03-2018 IPR010994 RuvA domain 2-like APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 Gene3D G3DSA:1.10.150.20 661 725 1.9E-7 T 28-03-2018 APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 Gene3D G3DSA:1.10.150.20 434 572 4.4E-22 T 28-03-2018 APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 409 436 9.1E-12 T 28-03-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 APY29_RS14600 6d2346cf7605a9a97cb5890254276696 833 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 117 146 - T 28-03-2018 IPR018239 NAD-dependent DNA ligase, active site APY29_RS02445 8bd32856b032508c18640c0088cb5d36 112 SMART SM00938 4 105 7.3E-63 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APY29_RS02445 8bd32856b032508c18640c0088cb5d36 112 Gene3D G3DSA:3.30.70.120 1 108 9.9E-47 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APY29_RS02445 8bd32856b032508c18640c0088cb5d36 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 28-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 APY29_RS02445 8bd32856b032508c18640c0088cb5d36 112 PRINTS PR00340 P-II protein signature 23 41 1.3E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APY29_RS02445 8bd32856b032508c18640c0088cb5d36 112 PRINTS PR00340 P-II protein signature 83 103 1.3E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APY29_RS02445 8bd32856b032508c18640c0088cb5d36 112 PRINTS PR00340 P-II protein signature 52 75 1.3E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APY29_RS02445 8bd32856b032508c18640c0088cb5d36 112 PRINTS PR00340 P-II protein signature 2 17 1.3E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APY29_RS02445 8bd32856b032508c18640c0088cb5d36 112 PIRSF PIRSF039144 1 112 8.6E-52 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APY29_RS02445 8bd32856b032508c18640c0088cb5d36 112 SUPERFAMILY SSF54913 1 112 1.94E-44 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta APY29_RS02445 8bd32856b032508c18640c0088cb5d36 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 28-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 APY29_RS02445 8bd32856b032508c18640c0088cb5d36 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.3E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APY29_RS13150 22d4866ffe207c049a779b91848efb15 824 SUPERFAMILY SSF58104 530 814 6.8E-73 T 28-03-2018 APY29_RS13150 22d4866ffe207c049a779b91848efb15 824 SMART SM00304 510 562 12.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13150 22d4866ffe207c049a779b91848efb15 824 SMART SM00304 329 381 1.2E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13150 22d4866ffe207c049a779b91848efb15 824 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 626 777 5.8E-53 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS13150 22d4866ffe207c049a779b91848efb15 824 Pfam PF00672 HAMP domain 330 378 7.3E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13150 22d4866ffe207c049a779b91848efb15 824 SMART SM00283 563 810 1.1E-93 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS13150 22d4866ffe207c049a779b91848efb15 824 Gene3D G3DSA:1.10.287.950 617 814 1.6E-49 T 28-03-2018 APY29_RS13150 22d4866ffe207c049a779b91848efb15 824 Gene3D G3DSA:1.10.287.950 327 616 2.8E-22 T 28-03-2018 APY29_RS13150 22d4866ffe207c049a779b91848efb15 824 SUPERFAMILY SSF158472 330 379 5.75E-6 T 28-03-2018 APY29_RS14435 b8146357eef84e73aceb993bf4028e39 154 Gene3D G3DSA:1.10.10.10 6 152 4.6E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS14435 b8146357eef84e73aceb993bf4028e39 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 1.2E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS14435 b8146357eef84e73aceb993bf4028e39 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 1.2E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS14435 b8146357eef84e73aceb993bf4028e39 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 123 143 1.2E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS14435 b8146357eef84e73aceb993bf4028e39 154 SUPERFAMILY SSF46785 16 149 3.6E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS14435 b8146357eef84e73aceb993bf4028e39 154 SMART SM00347 33 133 2.9E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS14435 b8146357eef84e73aceb993bf4028e39 154 Pfam PF01047 MarR family 50 97 5.7E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS19730 9b15b944bcb35cfc3c9e3ae3c9120aa8 350 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 267 303 7.0E-11 T 28-03-2018 IPR011964 YVTN beta-propeller repeat APY29_RS19730 9b15b944bcb35cfc3c9e3ae3c9120aa8 350 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 308 348 1.7E-16 T 28-03-2018 IPR011964 YVTN beta-propeller repeat APY29_RS19730 9b15b944bcb35cfc3c9e3ae3c9120aa8 350 SUPERFAMILY SSF50974 44 348 2.01E-67 T 28-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 APY29_RS19730 9b15b944bcb35cfc3c9e3ae3c9120aa8 350 Gene3D G3DSA:2.130.10.10 287 349 1.1E-12 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS19730 9b15b944bcb35cfc3c9e3ae3c9120aa8 350 Gene3D G3DSA:2.130.10.10 177 286 2.0E-27 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS19730 9b15b944bcb35cfc3c9e3ae3c9120aa8 350 Gene3D G3DSA:2.130.10.10 25 176 7.6E-18 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS19730 9b15b944bcb35cfc3c9e3ae3c9120aa8 350 Pfam PF10282 Lactonase, 7-bladed beta-propeller 130 201 3.9E-6 T 28-03-2018 IPR019405 Lactonase, 7-bladed beta propeller APY29_RS19730 9b15b944bcb35cfc3c9e3ae3c9120aa8 350 Pfam PF10282 Lactonase, 7-bladed beta-propeller 214 327 1.6E-10 T 28-03-2018 IPR019405 Lactonase, 7-bladed beta propeller APY29_RS18300 0c61401d64d9e22f5431fd08a1590c53 187 Gene3D G3DSA:1.10.1740.10 10 93 7.9E-8 T 28-03-2018 APY29_RS18300 0c61401d64d9e22f5431fd08a1590c53 187 Pfam PF08281 Sigma-70, region 4 127 179 1.9E-17 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS18300 0c61401d64d9e22f5431fd08a1590c53 187 Pfam PF04542 Sigma-70 region 2 30 89 2.9E-5 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS18300 0c61401d64d9e22f5431fd08a1590c53 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 182 3.2E-23 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS18300 0c61401d64d9e22f5431fd08a1590c53 187 SUPERFAMILY SSF88946 24 95 1.53E-7 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS18300 0c61401d64d9e22f5431fd08a1590c53 187 Gene3D G3DSA:1.10.10.10 107 185 3.2E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS18300 0c61401d64d9e22f5431fd08a1590c53 187 SUPERFAMILY SSF88659 120 184 4.11E-16 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS16100 c52574b2fff749c682ae176f5d96095d 250 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 54 94 - T 28-03-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 APY29_RS16100 c52574b2fff749c682ae176f5d96095d 250 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 6 250 33.144 T 28-03-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112 APY29_RS16100 c52574b2fff749c682ae176f5d96095d 250 Pfam PF01048 Phosphorylase superfamily 8 242 5.2E-39 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APY29_RS16100 c52574b2fff749c682ae176f5d96095d 250 Gene3D G3DSA:3.40.50.1580 1 250 7.4E-39 T 28-03-2018 APY29_RS16100 c52574b2fff749c682ae176f5d96095d 250 SUPERFAMILY SSF53167 7 248 2.08E-73 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APY29_RS20705 37a2287fa80fb67aa5a7541defc1c892 345 Gene3D G3DSA:1.20.970.10 1 72 1.9E-17 T 28-03-2018 APY29_RS20705 37a2287fa80fb67aa5a7541defc1c892 345 Pfam PF00591 Glycosyl transferase family, a/b domain 77 327 6.4E-92 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 APY29_RS20705 37a2287fa80fb67aa5a7541defc1c892 345 Gene3D G3DSA:3.40.1030.10 73 345 1.4E-105 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 APY29_RS20705 37a2287fa80fb67aa5a7541defc1c892 345 SUPERFAMILY SSF52418 77 340 3.92E-93 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 APY29_RS20705 37a2287fa80fb67aa5a7541defc1c892 345 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 337 36.963 T 28-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 APY29_RS20705 37a2287fa80fb67aa5a7541defc1c892 345 SUPERFAMILY SSF47648 4 72 4.06E-18 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 APY29_RS20705 37a2287fa80fb67aa5a7541defc1c892 345 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 9 336 1.0E-123 T 28-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 APY29_RS20705 37a2287fa80fb67aa5a7541defc1c892 345 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 68 2.3E-13 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 APY29_RS18835 e2607ba2e41b80b505411d5435ec0614 316 Hamap MF_01987 Ribokinase [rbsK]. 2 315 21.547 T 28-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 APY29_RS18835 e2607ba2e41b80b505411d5435ec0614 316 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 261 274 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APY29_RS18835 e2607ba2e41b80b505411d5435ec0614 316 PRINTS PR00990 Ribokinase signature 102 115 8.4E-19 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 APY29_RS18835 e2607ba2e41b80b505411d5435ec0614 316 PRINTS PR00990 Ribokinase signature 171 186 8.4E-19 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 APY29_RS18835 e2607ba2e41b80b505411d5435ec0614 316 PRINTS PR00990 Ribokinase signature 224 235 8.4E-19 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 APY29_RS18835 e2607ba2e41b80b505411d5435ec0614 316 PRINTS PR00990 Ribokinase signature 6 27 8.4E-19 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 APY29_RS18835 e2607ba2e41b80b505411d5435ec0614 316 SUPERFAMILY SSF53613 1 312 1.12E-58 T 28-03-2018 IPR029056 Ribokinase-like APY29_RS18835 e2607ba2e41b80b505411d5435ec0614 316 Pfam PF00294 pfkB family carbohydrate kinase 1 310 6.8E-46 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB APY29_RS18835 e2607ba2e41b80b505411d5435ec0614 316 Gene3D G3DSA:3.40.1190.20 2 314 1.0E-56 T 28-03-2018 IPR029056 Ribokinase-like APY29_RS21915 38aae1fda545646ff2de6597f935538c 352 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 178 337 5.2E-35 T 28-03-2018 IPR000160 GGDEF domain APY29_RS21915 38aae1fda545646ff2de6597f935538c 352 Gene3D G3DSA:3.30.70.270 179 345 7.8E-45 T 28-03-2018 APY29_RS21915 38aae1fda545646ff2de6597f935538c 352 Pfam PF00990 Diguanylate cyclase, GGDEF domain 182 333 1.7E-38 T 28-03-2018 IPR000160 GGDEF domain APY29_RS21915 38aae1fda545646ff2de6597f935538c 352 SUPERFAMILY SSF55073 186 337 5.89E-37 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS21915 38aae1fda545646ff2de6597f935538c 352 Gene3D G3DSA:2.60.120.10 23 150 7.8E-24 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS21915 38aae1fda545646ff2de6597f935538c 352 SUPERFAMILY SSF51206 28 150 7.73E-23 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like APY29_RS21915 38aae1fda545646ff2de6597f935538c 352 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 88 106 - T 28-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site APY29_RS21915 38aae1fda545646ff2de6597f935538c 352 SMART SM00267 170 338 1.4E-42 T 28-03-2018 IPR000160 GGDEF domain APY29_RS21915 38aae1fda545646ff2de6597f935538c 352 Pfam PF00027 Cyclic nucleotide-binding domain 43 127 5.6E-19 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain APY29_RS21915 38aae1fda545646ff2de6597f935538c 352 SMART SM00100 24 139 1.7E-17 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain APY29_RS05075 7774404a610810c16e1b8935b0fcda1d 418 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 3 398 44.472 T 28-03-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 APY29_RS05075 7774404a610810c16e1b8935b0fcda1d 418 PIRSF PIRSF036483 2 417 2.0E-217 T 28-03-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 APY29_RS05075 7774404a610810c16e1b8935b0fcda1d 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 192 2.2E-9 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 APY29_RS05075 7774404a610810c16e1b8935b0fcda1d 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 8 27 2.2E-9 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 APY29_RS05075 7774404a610810c16e1b8935b0fcda1d 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 256 278 2.2E-9 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 APY29_RS05075 7774404a610810c16e1b8935b0fcda1d 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 134 151 2.2E-9 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 APY29_RS05075 7774404a610810c16e1b8935b0fcda1d 418 Pfam PF00365 Phosphofructokinase 10 321 1.2E-48 T 28-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 APY29_RS05075 7774404a610810c16e1b8935b0fcda1d 418 Gene3D G3DSA:3.40.50.450 2 235 1.6E-49 T 28-03-2018 APY29_RS05075 7774404a610810c16e1b8935b0fcda1d 418 SUPERFAMILY SSF53784 5 416 3.14E-103 T 28-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 APY29_RS00715 935fd36170e162ba0fdf44bb90287ba0 330 SUPERFAMILY SSF52540 16 302 2.18E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS00715 935fd36170e162ba0fdf44bb90287ba0 330 Gene3D G3DSA:1.10.8.300 210 326 3.7E-29 T 28-03-2018 APY29_RS00715 935fd36170e162ba0fdf44bb90287ba0 330 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 46 180 8.6E-63 T 28-03-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 APY29_RS00715 935fd36170e162ba0fdf44bb90287ba0 330 Gene3D G3DSA:3.40.50.300 27 197 3.6E-27 T 28-03-2018 APY29_RS00715 935fd36170e162ba0fdf44bb90287ba0 330 PIRSF PIRSF002849 1 330 5.4E-122 T 28-03-2018 APY29_RS18370 194990f4fbafda0ad3ba1912e9eccf9c 187 Pfam PF00578 AhpC/TSA family 4 132 3.2E-30 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 APY29_RS18370 194990f4fbafda0ad3ba1912e9eccf9c 187 SUPERFAMILY SSF52833 1 186 2.3E-51 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS18370 194990f4fbafda0ad3ba1912e9eccf9c 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 3.9E-5 T 28-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 APY29_RS18370 194990f4fbafda0ad3ba1912e9eccf9c 187 Gene3D G3DSA:3.30.1020.10 153 183 4.0E-9 T 28-03-2018 APY29_RS18370 194990f4fbafda0ad3ba1912e9eccf9c 187 Gene3D G3DSA:3.40.30.10 4 152 9.0E-31 T 28-03-2018 APY29_RS18370 194990f4fbafda0ad3ba1912e9eccf9c 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 1.1E-95 T 28-03-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APY29_RS18370 194990f4fbafda0ad3ba1912e9eccf9c 187 PIRSF PIRSF000239 1 187 6.7E-46 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 APY29_RS07600 27be56e607429c083abccfeff2e429c6 292 PIRSF PIRSF016184 1 291 1.5E-96 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 APY29_RS07600 27be56e607429c083abccfeff2e429c6 292 Gene3D G3DSA:3.10.310.10 132 281 7.0E-39 T 28-03-2018 APY29_RS07600 27be56e607429c083abccfeff2e429c6 292 Gene3D G3DSA:3.10.310.10 1 131 2.8E-28 T 28-03-2018 APY29_RS07600 27be56e607429c083abccfeff2e429c6 292 SUPERFAMILY SSF54506 3 290 2.97E-70 T 28-03-2018 APY29_RS07600 27be56e607429c083abccfeff2e429c6 292 Pfam PF02567 Phenazine biosynthesis-like protein 9 286 1.2E-53 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 APY29_RS07600 27be56e607429c083abccfeff2e429c6 292 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 290 8.0E-57 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 APY29_RS21535 c39bba5fe5fe73758cd09dbbddfb3c55 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 411 3.0E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS21535 c39bba5fe5fe73758cd09dbbddfb3c55 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 436 3.0E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS21535 c39bba5fe5fe73758cd09dbbddfb3c55 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 397 3.0E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS21535 c39bba5fe5fe73758cd09dbbddfb3c55 459 Pfam PF00672 HAMP domain 183 232 3.1E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS21535 c39bba5fe5fe73758cd09dbbddfb3c55 459 SUPERFAMILY SSF47384 219 298 1.86E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS21535 c39bba5fe5fe73758cd09dbbddfb3c55 459 SUPERFAMILY SSF158472 183 232 1.83E-8 T 28-03-2018 APY29_RS21535 c39bba5fe5fe73758cd09dbbddfb3c55 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 455 3.3E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS21535 c39bba5fe5fe73758cd09dbbddfb3c55 459 SMART SM00387 346 458 2.0E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS21535 c39bba5fe5fe73758cd09dbbddfb3c55 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 296 1.5E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS21535 c39bba5fe5fe73758cd09dbbddfb3c55 459 SUPERFAMILY SSF55874 289 456 2.36E-41 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS21535 c39bba5fe5fe73758cd09dbbddfb3c55 459 SMART SM00388 236 300 4.8E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS21535 c39bba5fe5fe73758cd09dbbddfb3c55 459 Gene3D G3DSA:3.30.565.10 304 459 4.1E-42 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS21535 c39bba5fe5fe73758cd09dbbddfb3c55 459 SMART SM00304 183 235 8.8E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS21535 c39bba5fe5fe73758cd09dbbddfb3c55 459 Gene3D G3DSA:1.10.287.130 226 295 1.3E-14 T 28-03-2018 APY29_RS17570 9c1afe5e77b6adf438ff91eff6a17450 656 Pfam PF13145 PPIC-type PPIASE domain 397 512 6.4E-8 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 APY29_RS17570 9c1afe5e77b6adf438ff91eff6a17450 656 SUPERFAMILY SSF54534 283 389 1.57E-31 T 28-03-2018 APY29_RS17570 9c1afe5e77b6adf438ff91eff6a17450 656 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 326 347 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 APY29_RS17570 9c1afe5e77b6adf438ff91eff6a17450 656 SUPERFAMILY SSF109998 221 258 5.1E-19 T 28-03-2018 IPR027304 Trigger factor/SurA domain APY29_RS17570 9c1afe5e77b6adf438ff91eff6a17450 656 SUPERFAMILY SSF109998 68 188 5.1E-19 T 28-03-2018 IPR027304 Trigger factor/SurA domain APY29_RS17570 9c1afe5e77b6adf438ff91eff6a17450 656 Gene3D G3DSA:3.10.50.40 278 408 5.4E-39 T 28-03-2018 APY29_RS17570 9c1afe5e77b6adf438ff91eff6a17450 656 Gene3D G3DSA:3.10.50.40 522 630 0.37 T 28-03-2018 APY29_RS17570 9c1afe5e77b6adf438ff91eff6a17450 656 Gene3D G3DSA:3.10.50.40 409 521 3.3E-8 T 28-03-2018 APY29_RS17570 9c1afe5e77b6adf438ff91eff6a17450 656 Gene3D G3DSA:1.10.4030.10 66 191 5.0E-13 T 28-03-2018 APY29_RS17570 9c1afe5e77b6adf438ff91eff6a17450 656 Pfam PF13616 PPIC-type PPIASE domain 281 386 3.9E-29 T 28-03-2018 APY29_RS17570 9c1afe5e77b6adf438ff91eff6a17450 656 Pfam PF13623 SurA N-terminal domain 2 159 1.7E-26 T 28-03-2018 APY29_RS02420 2cbd8c15840c17bae9048ecd09fd6706 520 Pfam PF12792 CSS motif domain associated with EAL 40 231 3.7E-32 T 28-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain APY29_RS02420 2cbd8c15840c17bae9048ecd09fd6706 520 SMART SM00052 263 507 1.2E-92 T 28-03-2018 IPR001633 EAL domain APY29_RS02420 2cbd8c15840c17bae9048ecd09fd6706 520 Gene3D G3DSA:3.20.20.450 259 510 2.5E-83 T 28-03-2018 IPR001633 EAL domain APY29_RS02420 2cbd8c15840c17bae9048ecd09fd6706 520 SUPERFAMILY SSF141868 270 514 1.31E-75 T 28-03-2018 IPR001633 EAL domain APY29_RS02420 2cbd8c15840c17bae9048ecd09fd6706 520 Pfam PF00563 EAL domain 271 501 2.0E-62 T 28-03-2018 IPR001633 EAL domain APY29_RS11120 8534457820dc0729914528e6c708ff42 260 Pfam PF13534 4Fe-4S dicluster domain 170 243 7.0E-10 T 28-03-2018 APY29_RS11120 8534457820dc0729914528e6c708ff42 260 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 171 182 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APY29_RS11120 8534457820dc0729914528e6c708ff42 260 SUPERFAMILY SSF54292 26 128 4.85E-31 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APY29_RS11120 8534457820dc0729914528e6c708ff42 260 Gene3D G3DSA:3.10.20.30 19 126 4.5E-37 T 28-03-2018 IPR012675 Beta-grasp domain APY29_RS11120 8534457820dc0729914528e6c708ff42 260 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 28 133 1.2E-33 T 28-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 APY29_RS11120 8534457820dc0729914528e6c708ff42 260 Gene3D G3DSA:1.10.1060.10 129 260 8.3E-31 T 28-03-2018 APY29_RS11120 8534457820dc0729914528e6c708ff42 260 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 79 87 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APY29_RS11120 8534457820dc0729914528e6c708ff42 260 SUPERFAMILY SSF46548 130 257 1.1E-39 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 APY29_RS11120 8534457820dc0729914528e6c708ff42 260 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 31 252 2.2E-84 T 28-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 APY29_RS21075 0c4de2bf2f775b905dae95c8930ac280 253 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 5 192 2.8E-73 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 APY29_RS21075 0c4de2bf2f775b905dae95c8930ac280 253 Gene3D G3DSA:3.30.70.1530 22 90 2.3E-15 T 28-03-2018 APY29_RS21075 0c4de2bf2f775b905dae95c8930ac280 253 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 117 130 1.1E-26 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 APY29_RS21075 0c4de2bf2f775b905dae95c8930ac280 253 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 77 90 1.1E-26 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 APY29_RS21075 0c4de2bf2f775b905dae95c8930ac280 253 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 165 177 1.1E-26 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 APY29_RS21075 0c4de2bf2f775b905dae95c8930ac280 253 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 24 34 1.1E-26 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 APY29_RS21075 0c4de2bf2f775b905dae95c8930ac280 253 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 97 112 1.1E-26 T 28-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 APY29_RS21075 0c4de2bf2f775b905dae95c8930ac280 253 Pfam PF01514 Secretory protein of YscJ/FliF family 8 186 1.1E-28 T 28-03-2018 IPR006182 Secretory protein YscJ/FliF APY29_RS01315 d415a7770c23f9f3cf5421f0366bbcab 351 Gene3D G3DSA:3.10.310.10 182 336 8.0E-49 T 28-03-2018 APY29_RS01315 d415a7770c23f9f3cf5421f0366bbcab 351 SUPERFAMILY SSF54506 172 350 1.41E-52 T 28-03-2018 APY29_RS01315 d415a7770c23f9f3cf5421f0366bbcab 351 Gene3D G3DSA:3.10.310.10 1 181 6.3E-78 T 28-03-2018 APY29_RS01315 d415a7770c23f9f3cf5421f0366bbcab 351 SUPERFAMILY SSF54506 4 168 5.49E-63 T 28-03-2018 APY29_RS01315 d415a7770c23f9f3cf5421f0366bbcab 351 Pfam PF04303 PrpF protein 4 350 1.6E-110 T 28-03-2018 IPR007400 PrpF protein APY29_RS18005 2be04198d5cfce536bb997649791458f 122 SMART SM01374 1 122 2.2E-88 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APY29_RS18005 2be04198d5cfce536bb997649791458f 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.0E-56 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APY29_RS18005 2be04198d5cfce536bb997649791458f 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 28-03-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18005 2be04198d5cfce536bb997649791458f 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 28.009 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APY29_RS18005 2be04198d5cfce536bb997649791458f 122 Gene3D G3DSA:2.40.150.20 1 122 1.1E-54 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APY29_RS18005 2be04198d5cfce536bb997649791458f 122 SUPERFAMILY SSF50193 1 122 2.49E-53 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APY29_RS18005 2be04198d5cfce536bb997649791458f 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.9E-59 T 28-03-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 APY29_RS06370 d865a1842b9f7f62044c177ad6f605b9 439 Pfam PF07676 WD40-like Beta Propeller Repeat 243 276 1.4E-8 T 28-03-2018 IPR011659 WD40-like Beta Propeller APY29_RS06370 d865a1842b9f7f62044c177ad6f605b9 439 Pfam PF07676 WD40-like Beta Propeller Repeat 284 320 1.2E-14 T 28-03-2018 IPR011659 WD40-like Beta Propeller APY29_RS06370 d865a1842b9f7f62044c177ad6f605b9 439 Pfam PF07676 WD40-like Beta Propeller Repeat 209 231 7.9E-6 T 28-03-2018 IPR011659 WD40-like Beta Propeller APY29_RS06370 d865a1842b9f7f62044c177ad6f605b9 439 Pfam PF04052 TolB amino-terminal domain 27 132 2.2E-30 T 28-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 APY29_RS06370 d865a1842b9f7f62044c177ad6f605b9 439 Gene3D G3DSA:3.40.50.10070 26 162 1.0E-32 T 28-03-2018 APY29_RS06370 d865a1842b9f7f62044c177ad6f605b9 439 Hamap MF_00671 Protein TolB [tolB]. 8 432 36.533 T 28-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 APY29_RS06370 d865a1842b9f7f62044c177ad6f605b9 439 Gene3D G3DSA:2.60.120.20 242 281 2.0E-7 T 28-03-2018 APY29_RS06370 d865a1842b9f7f62044c177ad6f605b9 439 Gene3D G3DSA:2.60.120.20 330 374 0.0073 T 28-03-2018 APY29_RS06370 d865a1842b9f7f62044c177ad6f605b9 439 Gene3D G3DSA:2.60.120.20 282 329 3.7E-14 T 28-03-2018 APY29_RS06370 d865a1842b9f7f62044c177ad6f605b9 439 Gene3D G3DSA:2.60.120.20 163 241 4.8E-11 T 28-03-2018 APY29_RS06370 d865a1842b9f7f62044c177ad6f605b9 439 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 21 433 1.8E-159 T 28-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 APY29_RS06370 d865a1842b9f7f62044c177ad6f605b9 439 Gene3D G3DSA:2.140.10.30 375 436 0.0021 T 28-03-2018 APY29_RS06370 d865a1842b9f7f62044c177ad6f605b9 439 SUPERFAMILY SSF52964 34 164 7.98E-35 T 28-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 APY29_RS06370 d865a1842b9f7f62044c177ad6f605b9 439 SUPERFAMILY SSF69304 157 434 3.01E-53 T 28-03-2018 APY29_RS04675 ec536e23a3a8aeeb8aae8f46eb05da58 466 Gene3D G3DSA:2.30.40.10 40 104 1.8E-21 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS04675 ec536e23a3a8aeeb8aae8f46eb05da58 466 Gene3D G3DSA:3.20.20.140 105 396 2.6E-21 T 28-03-2018 APY29_RS04675 ec536e23a3a8aeeb8aae8f46eb05da58 466 SUPERFAMILY SSF51338 32 94 2.16E-24 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS04675 ec536e23a3a8aeeb8aae8f46eb05da58 466 SUPERFAMILY SSF51338 410 447 2.16E-24 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS04675 ec536e23a3a8aeeb8aae8f46eb05da58 466 Pfam PF01979 Amidohydrolase family 380 427 9.8E-10 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 APY29_RS04675 ec536e23a3a8aeeb8aae8f46eb05da58 466 SUPERFAMILY SSF51556 93 410 1.05E-24 T 28-03-2018 IPR032466 Metal-dependent hydrolase APY29_RS04675 ec536e23a3a8aeeb8aae8f46eb05da58 466 Gene3D G3DSA:3.20.20.140 397 436 1.2E-6 T 28-03-2018 APY29_RS16390 8922cfefbd33506e6944c74396fd587a 527 SUPERFAMILY SSF51011 393 526 8.99E-29 T 28-03-2018 APY29_RS16390 8922cfefbd33506e6944c74396fd587a 527 Gene3D G3DSA:3.20.20.80 52 403 3.4E-99 T 28-03-2018 APY29_RS16390 8922cfefbd33506e6944c74396fd587a 527 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 330 520 3.5E-40 T 28-03-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 APY29_RS16390 8922cfefbd33506e6944c74396fd587a 527 Gene3D G3DSA:2.60.40.1180 404 527 9.2E-32 T 28-03-2018 APY29_RS16390 8922cfefbd33506e6944c74396fd587a 527 SMART SM00813 330 520 7.8E-87 T 28-03-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 APY29_RS16390 8922cfefbd33506e6944c74396fd587a 527 SUPERFAMILY SSF51445 51 412 4.3E-90 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS12340 b986770be730c8670d589eb66a2aafe6 622 Gene3D G3DSA:3.40.50.300 66 469 1.9E-15 T 28-03-2018 APY29_RS12340 b986770be730c8670d589eb66a2aafe6 622 SUPERFAMILY SSF52540 323 464 4.32E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS12340 b986770be730c8670d589eb66a2aafe6 622 SUPERFAMILY SSF52540 220 294 4.32E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS12340 b986770be730c8670d589eb66a2aafe6 622 Pfam PF13166 AAA domain 33 582 1.6E-83 T 28-03-2018 IPR026866 Protein CR006, P-loop domain APY29_RS00295 dee3b322b58a57293491ca04c65d5358 469 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 32 469 2.1E-127 T 28-03-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase APY29_RS00295 dee3b322b58a57293491ca04c65d5358 469 Gene3D G3DSA:3.40.50.720 156 269 0.0054 T 28-03-2018 APY29_RS00295 dee3b322b58a57293491ca04c65d5358 469 Pfam PF13727 CoA-binding domain 81 243 1.3E-15 T 28-03-2018 APY29_RS00295 dee3b322b58a57293491ca04c65d5358 469 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 32 469 4.3E-138 T 28-03-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 APY29_RS00295 dee3b322b58a57293491ca04c65d5358 469 Pfam PF02397 Bacterial sugar transferase 279 463 1.1E-58 T 28-03-2018 IPR003362 Bacterial sugar transferase APY29_RS09830 aec011833e3b0dfe508708910dc4c8d2 333 SUPERFAMILY SSF143865 7 265 1.7E-72 T 28-03-2018 APY29_RS09830 aec011833e3b0dfe508708910dc4c8d2 333 Gene3D G3DSA:1.20.58.340 266 333 5.7E-15 T 28-03-2018 APY29_RS09830 aec011833e3b0dfe508708910dc4c8d2 333 Gene3D G3DSA:3.30.460.20 2 145 1.3E-33 T 28-03-2018 APY29_RS09830 aec011833e3b0dfe508708910dc4c8d2 333 Gene3D G3DSA:1.20.58.340 147 265 1.7E-28 T 28-03-2018 APY29_RS09830 aec011833e3b0dfe508708910dc4c8d2 333 SUPERFAMILY SSF144083 269 330 5.49E-16 T 28-03-2018 APY29_RS09830 aec011833e3b0dfe508708910dc4c8d2 333 Pfam PF01544 CorA-like Mg2+ transporter protein 42 329 2.8E-61 T 28-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 APY29_RS03920 3fc8c40be43c2f2459c9c74def85866c 104 SUPERFAMILY SSF50156 33 93 1.4E-6 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS03920 3fc8c40be43c2f2459c9c74def85866c 104 Gene3D G3DSA:2.30.42.10 24 94 9.0E-6 T 28-03-2018 APY29_RS20650 6d5a76938d8e4cbdd96e16021bd93054 205 Gene3D G3DSA:3.90.79.10 1 163 5.1E-31 T 28-03-2018 APY29_RS20650 6d5a76938d8e4cbdd96e16021bd93054 205 Pfam PF00293 NUDIX domain 7 129 4.0E-24 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 APY29_RS20650 6d5a76938d8e4cbdd96e16021bd93054 205 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APY29_RS20650 6d5a76938d8e4cbdd96e16021bd93054 205 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 36.373 T 28-03-2018 IPR022927 RNA pyrophosphohydrolase RppH APY29_RS20650 6d5a76938d8e4cbdd96e16021bd93054 205 SUPERFAMILY SSF55811 7 151 1.19E-29 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 APY29_RS13445 de52cff5940af82b64bda7dce70f413a 210 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 15 205 1.6E-72 T 28-03-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|Reactome: R-HSA-1237112 APY29_RS13445 de52cff5940af82b64bda7dce70f413a 210 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 209 109.437 T 28-03-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|Reactome: R-HSA-1237112 APY29_RS13445 de52cff5940af82b64bda7dce70f413a 210 SUPERFAMILY SSF53639 9 206 1.9E-44 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal APY29_RS13445 de52cff5940af82b64bda7dce70f413a 210 SMART SM01007 13 201 9.2E-50 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal APY29_RS13445 de52cff5940af82b64bda7dce70f413a 210 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 15 200 8.7E-40 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal APY29_RS13445 de52cff5940af82b64bda7dce70f413a 210 Gene3D G3DSA:3.40.225.10 5 210 1.7E-43 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal APY29_RS19320 73f5b513e3c2fc4ce1d74b6b921d58d3 239 SUPERFAMILY SSF52172 3 137 7.26E-41 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS19320 73f5b513e3c2fc4ce1d74b6b921d58d3 239 SMART SM00862 157 232 9.9E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS19320 73f5b513e3c2fc4ce1d74b6b921d58d3 239 Gene3D G3DSA:3.40.50.2300 1 129 1.2E-38 T 28-03-2018 APY29_RS19320 73f5b513e3c2fc4ce1d74b6b921d58d3 239 Pfam PF00072 Response regulator receiver domain 8 118 1.3E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS19320 73f5b513e3c2fc4ce1d74b6b921d58d3 239 Gene3D G3DSA:1.10.10.10 130 237 5.4E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS19320 73f5b513e3c2fc4ce1d74b6b921d58d3 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 232 3.3E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS19320 73f5b513e3c2fc4ce1d74b6b921d58d3 239 SMART SM00448 6 117 5.3E-39 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS19320 73f5b513e3c2fc4ce1d74b6b921d58d3 239 SUPERFAMILY SSF46894 131 233 7.65E-25 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS10470 b569535666906e816a5dd4192361b6c9 156 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 140 31.526 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 APY29_RS10470 b569535666906e816a5dd4192361b6c9 156 Pfam PF03100 CcmE 5 130 9.1E-43 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 APY29_RS10470 b569535666906e816a5dd4192361b6c9 156 Gene3D G3DSA:2.40.50.140 27 124 2.1E-31 T 28-03-2018 APY29_RS10470 b569535666906e816a5dd4192361b6c9 156 SUPERFAMILY SSF82093 30 136 1.83E-37 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 APY29_RS15260 fbe8221176c465eed6f04f17663a148f 350 SUPERFAMILY SSF103473 7 345 2.09E-22 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS15260 fbe8221176c465eed6f04f17663a148f 350 Gene3D G3DSA:1.20.1250.20 141 349 1.0E-9 T 28-03-2018 APY29_RS15260 fbe8221176c465eed6f04f17663a148f 350 Gene3D G3DSA:1.20.1250.20 3 139 5.3E-8 T 28-03-2018 APY29_RS15260 fbe8221176c465eed6f04f17663a148f 350 Pfam PF07690 Major Facilitator Superfamily 5 297 1.9E-8 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS02910 01dd6afdd0d56fc11e6c388bf91e533d 579 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 9 579 39.713 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 APY29_RS02910 01dd6afdd0d56fc11e6c388bf91e533d 579 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 17 572 0.0 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 APY29_RS02910 01dd6afdd0d56fc11e6c388bf91e533d 579 PIRSF PIRSF000719 8 579 1.8E-269 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 APY29_RS02910 01dd6afdd0d56fc11e6c388bf91e533d 579 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 17 575 3.2E-211 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 APY29_RS12885 9a5bcb7e04047e30f1fb530e72ad46a7 337 PIRSF PIRSF002888 3 327 1.0E-92 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 APY29_RS12885 9a5bcb7e04047e30f1fb530e72ad46a7 337 Pfam PF02154 Flagellar motor switch protein FliM 38 230 8.1E-74 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 APY29_RS12885 9a5bcb7e04047e30f1fb530e72ad46a7 337 Gene3D G3DSA:3.40.1550.10 46 235 5.8E-40 T 28-03-2018 IPR028976 CheC-like domain APY29_RS12885 9a5bcb7e04047e30f1fb530e72ad46a7 337 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 5 318 4.1E-105 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 APY29_RS12885 9a5bcb7e04047e30f1fb530e72ad46a7 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 1.1E-24 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 APY29_RS12885 9a5bcb7e04047e30f1fb530e72ad46a7 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 4 17 1.1E-24 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 APY29_RS12885 9a5bcb7e04047e30f1fb530e72ad46a7 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 1.1E-24 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 APY29_RS12885 9a5bcb7e04047e30f1fb530e72ad46a7 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 1.1E-24 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 APY29_RS12885 9a5bcb7e04047e30f1fb530e72ad46a7 337 SUPERFAMILY SSF101801 249 321 2.22E-15 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) APY29_RS12885 9a5bcb7e04047e30f1fb530e72ad46a7 337 Gene3D G3DSA:2.30.330.10 238 327 8.1E-19 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) APY29_RS12885 9a5bcb7e04047e30f1fb530e72ad46a7 337 SUPERFAMILY SSF103039 7 15 9.94E-20 T 28-03-2018 IPR028976 CheC-like domain APY29_RS12885 9a5bcb7e04047e30f1fb530e72ad46a7 337 SUPERFAMILY SSF103039 55 231 9.94E-20 T 28-03-2018 IPR028976 CheC-like domain APY29_RS12885 9a5bcb7e04047e30f1fb530e72ad46a7 337 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 251 318 1.5E-19 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) APY29_RS05705 894d3443e548c8243db0db3fbad637ab 978 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 42 978 6.5E-247 T 28-03-2018 IPR010104 Bacterial TonB-dependent receptor APY29_RS05705 894d3443e548c8243db0db3fbad637ab 978 SUPERFAMILY SSF56935 584 717 2.04E-88 T 28-03-2018 APY29_RS05705 894d3443e548c8243db0db3fbad637ab 978 SUPERFAMILY SSF56935 750 978 2.04E-88 T 28-03-2018 APY29_RS05705 894d3443e548c8243db0db3fbad637ab 978 SUPERFAMILY SSF56935 31 238 2.04E-88 T 28-03-2018 APY29_RS05705 894d3443e548c8243db0db3fbad637ab 978 SUPERFAMILY SSF56935 453 515 2.04E-88 T 28-03-2018 APY29_RS05705 894d3443e548c8243db0db3fbad637ab 978 SUPERFAMILY SSF56935 291 421 2.04E-88 T 28-03-2018 APY29_RS05705 894d3443e548c8243db0db3fbad637ab 978 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 171 4.1E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS05705 894d3443e548c8243db0db3fbad637ab 978 Pfam PF00593 TonB dependent receptor 437 977 1.4E-34 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS05705 894d3443e548c8243db0db3fbad637ab 978 Gene3D G3DSA:2.170.130.10 33 180 2.4E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS05705 894d3443e548c8243db0db3fbad637ab 978 Gene3D G3DSA:2.40.170.20 184 978 2.3E-67 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS06895 d81930f19f074bbedf0f85622db2dea8 348 Gene3D G3DSA:3.90.550.10 4 225 9.4E-23 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS06895 d81930f19f074bbedf0f85622db2dea8 348 Pfam PF00535 Glycosyl transferase family 2 17 172 2.5E-24 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 APY29_RS06895 d81930f19f074bbedf0f85622db2dea8 348 SUPERFAMILY SSF53448 16 257 5.06E-33 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS23060 f9922986617c28ce6fe45679dba8dd51 84 SUPERFAMILY SSF47598 3 65 1.6E-18 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 APY29_RS23060 f9922986617c28ce6fe45679dba8dd51 84 Gene3D G3DSA:1.10.1220.10 1 42 4.1E-14 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APY29_RS23060 f9922986617c28ce6fe45679dba8dd51 84 Pfam PF03869 Arc-like DNA binding domain 1 39 6.1E-5 T 28-03-2018 IPR005569 Arc-like DNA binding domain GO:0003677 APY29_RS20345 b12745241a62f1fe0d2e298fb00dc651 357 Gene3D G3DSA:3.20.20.70 8 354 7.1E-129 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS20345 b12745241a62f1fe0d2e298fb00dc651 357 Pfam PF00793 DAHP synthetase I family 40 338 8.9E-101 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 APY29_RS20345 b12745241a62f1fe0d2e298fb00dc651 357 SUPERFAMILY SSF51569 7 348 1.26E-134 T 28-03-2018 APY29_RS20345 b12745241a62f1fe0d2e298fb00dc651 357 PIRSF PIRSF001361 2 352 3.2E-157 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 APY29_RS20345 b12745241a62f1fe0d2e298fb00dc651 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 4.2E-161 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 APY29_RS16705 f276097f371a5a9b7c14570d5bca876f 355 Pfam PF01018 GTP1/OBG 4 158 2.8E-59 T 28-03-2018 IPR006169 GTP1/OBG domain APY29_RS16705 f276097f371a5a9b7c14570d5bca876f 355 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 9.9E-35 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS16705 f276097f371a5a9b7c14570d5bca876f 355 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 9.9E-35 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS16705 f276097f371a5a9b7c14570d5bca876f 355 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 9.9E-35 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS16705 f276097f371a5a9b7c14570d5bca876f 355 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 9.9E-35 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS16705 f276097f371a5a9b7c14570d5bca876f 355 Gene3D G3DSA:3.40.50.300 159 353 2.1E-29 T 28-03-2018 APY29_RS16705 f276097f371a5a9b7c14570d5bca876f 355 Pfam PF01926 50S ribosome-binding GTPase 161 293 1.5E-23 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS16705 f276097f371a5a9b7c14570d5bca876f 355 SUPERFAMILY SSF52540 152 345 9.42E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS16705 f276097f371a5a9b7c14570d5bca876f 355 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 28-03-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 APY29_RS16705 f276097f371a5a9b7c14570d5bca876f 355 Gene3D G3DSA:2.70.210.12 3 156 1.6E-57 T 28-03-2018 IPR006169 GTP1/OBG domain APY29_RS16705 f276097f371a5a9b7c14570d5bca876f 355 Hamap MF_01454 GTPase Obg [obg]. 2 342 47.427 T 28-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APY29_RS16705 f276097f371a5a9b7c14570d5bca876f 355 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 340 2.2E-136 T 28-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APY29_RS16705 f276097f371a5a9b7c14570d5bca876f 355 SUPERFAMILY SSF82051 3 158 8.89E-58 T 28-03-2018 IPR006169 GTP1/OBG domain APY29_RS16705 f276097f371a5a9b7c14570d5bca876f 355 PIRSF PIRSF002401 1 354 1.2E-132 T 28-03-2018 IPR035101 GTP-binding protein, Obg-type APY29_RS22950 02a042709e52ebfa143c9b9ab1c77550 634 Pfam PF08446 PAS fold 13 74 1.7E-12 T 28-03-2018 IPR013654 PAS fold-2 GO:0006355 APY29_RS22950 02a042709e52ebfa143c9b9ab1c77550 634 SUPERFAMILY SSF55781 139 310 4.77E-54 T 28-03-2018 IPR029016 GAF domain-like APY29_RS22950 02a042709e52ebfa143c9b9ab1c77550 634 SUPERFAMILY SSF55781 338 511 4.81E-42 T 28-03-2018 IPR029016 GAF domain-like APY29_RS22950 02a042709e52ebfa143c9b9ab1c77550 634 SUPERFAMILY SSF55785 508 632 1.16E-9 T 28-03-2018 IPR000014 PAS domain APY29_RS22950 02a042709e52ebfa143c9b9ab1c77550 634 Gene3D G3DSA:3.30.450.20 2 120 7.7E-17 T 28-03-2018 APY29_RS22950 02a042709e52ebfa143c9b9ab1c77550 634 Pfam PF08448 PAS fold 539 632 5.7E-5 T 28-03-2018 IPR013656 PAS fold-4 APY29_RS22950 02a042709e52ebfa143c9b9ab1c77550 634 PRINTS PR01033 Phytochrome signature 159 178 1.1E-18 T 28-03-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 APY29_RS22950 02a042709e52ebfa143c9b9ab1c77550 634 PRINTS PR01033 Phytochrome signature 437 456 1.1E-18 T 28-03-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 APY29_RS22950 02a042709e52ebfa143c9b9ab1c77550 634 PRINTS PR01033 Phytochrome signature 246 267 1.1E-18 T 28-03-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 APY29_RS22950 02a042709e52ebfa143c9b9ab1c77550 634 PRINTS PR01033 Phytochrome signature 345 365 1.1E-18 T 28-03-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 APY29_RS22950 02a042709e52ebfa143c9b9ab1c77550 634 PRINTS PR01033 Phytochrome signature 471 489 1.1E-18 T 28-03-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 APY29_RS22950 02a042709e52ebfa143c9b9ab1c77550 634 Gene3D G3DSA:3.30.450.20 493 633 1.4E-12 T 28-03-2018 APY29_RS22950 02a042709e52ebfa143c9b9ab1c77550 634 SUPERFAMILY SSF55785 4 120 6.02E-28 T 28-03-2018 IPR000014 PAS domain APY29_RS22950 02a042709e52ebfa143c9b9ab1c77550 634 SMART SM00065 144 318 0.0033 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS22950 02a042709e52ebfa143c9b9ab1c77550 634 Pfam PF00360 Phytochrome region 325 510 2.1E-53 T 28-03-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 APY29_RS22950 02a042709e52ebfa143c9b9ab1c77550 634 SMART SM00091 517 588 5.8 T 28-03-2018 IPR000014 PAS domain APY29_RS22950 02a042709e52ebfa143c9b9ab1c77550 634 SMART SM00091 17 84 5.3 T 28-03-2018 IPR000014 PAS domain APY29_RS22950 02a042709e52ebfa143c9b9ab1c77550 634 Gene3D G3DSA:3.30.450.40 128 310 5.7E-39 T 28-03-2018 IPR029016 GAF domain-like APY29_RS22950 02a042709e52ebfa143c9b9ab1c77550 634 Pfam PF01590 GAF domain 146 296 7.1E-17 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS05120 cdc4ceda5999004bf850b58804b1dc7e 408 Pfam PF00202 Aminotransferase class-III 23 398 1.5E-116 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APY29_RS05120 cdc4ceda5999004bf850b58804b1dc7e 408 Gene3D G3DSA:3.40.640.10 168 293 1.7E-43 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS05120 cdc4ceda5999004bf850b58804b1dc7e 408 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 399 1.1E-140 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 APY29_RS05120 cdc4ceda5999004bf850b58804b1dc7e 408 Gene3D G3DSA:3.90.1150.10 2 161 1.4E-46 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS05120 cdc4ceda5999004bf850b58804b1dc7e 408 PIRSF PIRSF000521 20 159 1.6E-9 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APY29_RS05120 cdc4ceda5999004bf850b58804b1dc7e 408 PIRSF PIRSF000521 174 403 3.4E-34 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APY29_RS05120 cdc4ceda5999004bf850b58804b1dc7e 408 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 224 261 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APY29_RS05120 cdc4ceda5999004bf850b58804b1dc7e 408 SUPERFAMILY SSF53383 13 398 1.3E-122 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS05120 cdc4ceda5999004bf850b58804b1dc7e 408 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 12 402 45.034 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 APY29_RS05120 cdc4ceda5999004bf850b58804b1dc7e 408 Gene3D G3DSA:3.90.1150.10 294 408 8.9E-24 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS22380 83a9ff90a402b0b7551f2d96fd820e36 372 Gene3D G3DSA:3.40.50.1110 21 239 3.8E-35 T 28-03-2018 APY29_RS22380 83a9ff90a402b0b7551f2d96fd820e36 372 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 26 213 6.6E-18 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain APY29_RS22380 83a9ff90a402b0b7551f2d96fd820e36 372 Pfam PF07883 Cupin domain 301 365 5.6E-13 T 28-03-2018 IPR013096 Cupin 2, conserved barrel APY29_RS22380 83a9ff90a402b0b7551f2d96fd820e36 372 SUPERFAMILY SSF51182 271 366 7.05E-18 T 28-03-2018 IPR011051 RmlC-like cupin domain APY29_RS22380 83a9ff90a402b0b7551f2d96fd820e36 372 Gene3D G3DSA:2.60.120.10 240 369 9.7E-16 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS22380 83a9ff90a402b0b7551f2d96fd820e36 372 SUPERFAMILY SSF52266 22 235 3.83E-54 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain APY29_RS05180 2db3fdcfccbb8aa5a9a30e7a44ec66fb 212 Pfam PF02581 Thiamine monophosphate synthase 10 188 4.0E-53 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 APY29_RS05180 2db3fdcfccbb8aa5a9a30e7a44ec66fb 212 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 10 199 1.7E-57 T 28-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 APY29_RS05180 2db3fdcfccbb8aa5a9a30e7a44ec66fb 212 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 8 206 24.196 T 28-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 APY29_RS05180 2db3fdcfccbb8aa5a9a30e7a44ec66fb 212 Gene3D G3DSA:3.20.20.70 3 204 6.5E-43 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS05180 2db3fdcfccbb8aa5a9a30e7a44ec66fb 212 SUPERFAMILY SSF51391 6 202 4.71E-56 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 APY29_RS23325 290e21fc1c9065e387a402e55ae1bf14 766 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 149 4.9E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS23325 290e21fc1c9065e387a402e55ae1bf14 766 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 749 766 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site APY29_RS23325 290e21fc1c9065e387a402e55ae1bf14 766 Gene3D G3DSA:2.40.170.20 171 766 8.9E-59 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS23325 290e21fc1c9065e387a402e55ae1bf14 766 Gene3D G3DSA:2.170.130.10 31 170 5.1E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS23325 290e21fc1c9065e387a402e55ae1bf14 766 SUPERFAMILY SSF56935 300 766 1.06E-82 T 28-03-2018 APY29_RS23325 290e21fc1c9065e387a402e55ae1bf14 766 SUPERFAMILY SSF56935 35 271 1.06E-82 T 28-03-2018 APY29_RS23325 290e21fc1c9065e387a402e55ae1bf14 766 Pfam PF00593 TonB dependent receptor 267 763 5.3E-38 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS04895 d8c5f69dd592affd4590038843ad26e9 457 Pfam PF00375 Sodium:dicarboxylate symporter family 20 422 6.4E-101 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS04895 d8c5f69dd592affd4590038843ad26e9 457 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 47 62 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site APY29_RS04895 d8c5f69dd592affd4590038843ad26e9 457 Gene3D G3DSA:1.10.3860.10 13 429 7.8E-110 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS04895 d8c5f69dd592affd4590038843ad26e9 457 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 316 339 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site APY29_RS04895 d8c5f69dd592affd4590038843ad26e9 457 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 13 449 37.324 T 28-03-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 APY29_RS04895 d8c5f69dd592affd4590038843ad26e9 457 SUPERFAMILY SSF118215 20 423 6.54E-114 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS04895 d8c5f69dd592affd4590038843ad26e9 457 PRINTS PR00173 Glutamate-aspartate symporter signature 18 38 1.3E-26 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS04895 d8c5f69dd592affd4590038843ad26e9 457 PRINTS PR00173 Glutamate-aspartate symporter signature 166 188 1.3E-26 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS04895 d8c5f69dd592affd4590038843ad26e9 457 PRINTS PR00173 Glutamate-aspartate symporter signature 313 339 1.3E-26 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS04895 d8c5f69dd592affd4590038843ad26e9 457 PRINTS PR00173 Glutamate-aspartate symporter signature 348 367 1.3E-26 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS04895 d8c5f69dd592affd4590038843ad26e9 457 PRINTS PR00173 Glutamate-aspartate symporter signature 213 232 1.3E-26 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS04895 d8c5f69dd592affd4590038843ad26e9 457 PRINTS PR00173 Glutamate-aspartate symporter signature 85 110 1.3E-26 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS17400 34e548922acf5f7774704999812685ec 314 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 9 312 1.9E-41 T 28-03-2018 IPR020801 Polyketide synthase, acyl transferase domain APY29_RS17400 34e548922acf5f7774704999812685ec 314 Pfam PF00698 Acyl transferase domain 8 267 2.0E-36 T 28-03-2018 IPR014043 Acyl transferase APY29_RS17400 34e548922acf5f7774704999812685ec 314 Gene3D G3DSA:3.30.70.250 146 184 1.2E-19 T 28-03-2018 APY29_RS17400 34e548922acf5f7774704999812685ec 314 Gene3D G3DSA:3.40.366.10 2 145 5.3E-42 T 28-03-2018 APY29_RS17400 34e548922acf5f7774704999812685ec 314 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 6 292 9.1E-100 T 28-03-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 APY29_RS17400 34e548922acf5f7774704999812685ec 314 PIRSF PIRSF000446 4 311 1.9E-102 T 28-03-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 APY29_RS17400 34e548922acf5f7774704999812685ec 314 SUPERFAMILY SSF52151 6 124 5.49E-76 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APY29_RS17400 34e548922acf5f7774704999812685ec 314 SUPERFAMILY SSF52151 192 312 5.49E-76 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APY29_RS17400 34e548922acf5f7774704999812685ec 314 Gene3D G3DSA:3.40.366.10 185 311 1.3E-28 T 28-03-2018 APY29_RS17400 34e548922acf5f7774704999812685ec 314 SUPERFAMILY SSF55048 132 199 1.83E-16 T 28-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 APY29_RS07180 958526f08230935d962d7920a5f1c937 254 Gene3D G3DSA:1.10.10.10 180 254 1.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS07180 958526f08230935d962d7920a5f1c937 254 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 222 234 4.5E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS07180 958526f08230935d962d7920a5f1c937 254 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 206 4.5E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS07180 958526f08230935d962d7920a5f1c937 254 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 206 222 4.5E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS07180 958526f08230935d962d7920a5f1c937 254 Pfam PF03472 Autoinducer binding domain 31 175 4.8E-23 T 28-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain APY29_RS07180 958526f08230935d962d7920a5f1c937 254 ProSitePatterns PS00622 LuxR-type HTH domain signature. 206 233 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS07180 958526f08230935d962d7920a5f1c937 254 SUPERFAMILY SSF46894 177 252 6.12E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS07180 958526f08230935d962d7920a5f1c937 254 Gene3D G3DSA:3.30.450.80 4 179 4.7E-33 T 28-03-2018 APY29_RS07180 958526f08230935d962d7920a5f1c937 254 SUPERFAMILY SSF75516 3 183 8.37E-31 T 28-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain APY29_RS07180 958526f08230935d962d7920a5f1c937 254 SMART SM00421 189 246 3.4E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS07180 958526f08230935d962d7920a5f1c937 254 Pfam PF00196 Bacterial regulatory proteins, luxR family 192 244 4.7E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS06560 019b2873c6b00e4243a503c489c9681d 239 SUPERFAMILY SSF53067 107 214 1.55E-21 T 28-03-2018 APY29_RS06560 019b2873c6b00e4243a503c489c9681d 239 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 216 4.2E-58 T 28-03-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 APY29_RS06560 019b2873c6b00e4243a503c489c9681d 239 SUPERFAMILY SSF53067 1 101 2.81E-28 T 28-03-2018 APY29_RS06560 019b2873c6b00e4243a503c489c9681d 239 Gene3D G3DSA:3.30.420.40 1 129 5.0E-37 T 28-03-2018 APY29_RS06560 019b2873c6b00e4243a503c489c9681d 239 Pfam PF00814 Glycoprotease family 28 220 8.5E-30 T 28-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APY29_RS06560 019b2873c6b00e4243a503c489c9681d 239 Gene3D G3DSA:3.30.420.40 130 228 1.4E-5 T 28-03-2018 APY29_RS14940 4efd1ab39254eb25d846d2e90229de01 249 SUPERFAMILY SSF55315 2 76 3.88E-14 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like APY29_RS14940 4efd1ab39254eb25d846d2e90229de01 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 6 246 2.1E-71 T 28-03-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 APY29_RS14940 4efd1ab39254eb25d846d2e90229de01 249 Pfam PF00588 SpoU rRNA Methylase family 100 239 5.8E-39 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APY29_RS14940 4efd1ab39254eb25d846d2e90229de01 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 81 8.2E-13 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 APY29_RS14940 4efd1ab39254eb25d846d2e90229de01 249 SMART SM00967 7 83 4.5E-11 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 APY29_RS14940 4efd1ab39254eb25d846d2e90229de01 249 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 5 247 39.458 T 28-03-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB APY29_RS14940 4efd1ab39254eb25d846d2e90229de01 249 SUPERFAMILY SSF75217 73 247 1.9E-47 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases APY29_RS14940 4efd1ab39254eb25d846d2e90229de01 249 Gene3D G3DSA:3.40.1280.10 83 249 1.0E-47 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APY29_RS14940 4efd1ab39254eb25d846d2e90229de01 249 Gene3D G3DSA:3.30.1330.30 1 78 1.3E-14 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like APY29_RS11535 c4af42657753ad44adffd713614c8f03 369 Gene3D G3DSA:3.40.50.150 11 333 3.3E-18 T 28-03-2018 APY29_RS11535 c4af42657753ad44adffd713614c8f03 369 SUPERFAMILY SSF53335 18 185 7.87E-22 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS11535 c4af42657753ad44adffd713614c8f03 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 41 55 9.3E-8 T 28-03-2018 APY29_RS11535 c4af42657753ad44adffd713614c8f03 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 101 113 9.3E-8 T 28-03-2018 APY29_RS11535 c4af42657753ad44adffd713614c8f03 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 130 154 9.3E-8 T 28-03-2018 APY29_RS11535 c4af42657753ad44adffd713614c8f03 369 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 104 110 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APY29_RS15410 ab33c46124b338d2a4789a1a3dd44bd1 255 PIRSF PIRSF005902 1 255 8.7E-68 T 28-03-2018 IPR001130 TatD family GO:0016788 APY29_RS15410 ab33c46124b338d2a4789a1a3dd44bd1 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APY29_RS15410 ab33c46124b338d2a4789a1a3dd44bd1 255 Pfam PF01026 TatD related DNase 4 251 9.0E-66 T 28-03-2018 IPR001130 TatD family GO:0016788 APY29_RS15410 ab33c46124b338d2a4789a1a3dd44bd1 255 Gene3D G3DSA:3.20.20.140 1 255 7.5E-78 T 28-03-2018 APY29_RS15410 ab33c46124b338d2a4789a1a3dd44bd1 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 188 204 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APY29_RS15410 ab33c46124b338d2a4789a1a3dd44bd1 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APY29_RS15410 ab33c46124b338d2a4789a1a3dd44bd1 255 SUPERFAMILY SSF51556 1 253 2.92E-80 T 28-03-2018 IPR032466 Metal-dependent hydrolase APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 Gene3D G3DSA:3.30.70.270 748 907 3.2E-49 T 28-03-2018 APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 Gene3D G3DSA:3.30.450.20 235 356 2.0E-18 T 28-03-2018 APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 747 904 1.5E-35 T 28-03-2018 IPR000160 GGDEF domain APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 SMART SM00091 231 301 29.0 T 28-03-2018 IPR000014 PAS domain APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 SMART SM00091 500 566 3.8E-13 T 28-03-2018 IPR000014 PAS domain APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 SMART SM00091 627 693 0.0072 T 28-03-2018 IPR000014 PAS domain APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 SMART SM00091 363 430 3.3E-6 T 28-03-2018 IPR000014 PAS domain APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 Pfam PF08448 PAS fold 237 352 8.6E-9 T 28-03-2018 IPR013656 PAS fold-4 APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 Pfam PF08448 PAS fold 371 488 2.3E-7 T 28-03-2018 IPR013656 PAS fold-4 APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 Pfam PF08448 PAS fold 634 738 3.0E-13 T 28-03-2018 IPR013656 PAS fold-4 APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 SMART SM00267 738 909 2.5E-41 T 28-03-2018 IPR000160 GGDEF domain APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 Pfam PF01590 GAF domain 91 213 4.6E-7 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 SUPERFAMILY SSF55785 220 349 8.38E-14 T 28-03-2018 IPR000014 PAS domain APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 SUPERFAMILY SSF55073 754 904 5.23E-40 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 SUPERFAMILY SSF55785 348 486 2.09E-19 T 28-03-2018 IPR000014 PAS domain APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 Pfam PF08447 PAS fold 525 607 1.6E-12 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 SMART SM00086 446 488 0.0053 T 28-03-2018 IPR001610 PAC motif APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 SMART SM00086 573 615 5.0E-8 T 28-03-2018 IPR001610 PAC motif APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 SMART SM00086 309 351 0.0057 T 28-03-2018 IPR001610 PAC motif APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 Gene3D G3DSA:3.30.450.40 70 234 3.1E-23 T 28-03-2018 IPR029016 GAF domain-like APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 Pfam PF00990 Diguanylate cyclase, GGDEF domain 749 904 3.4E-39 T 28-03-2018 IPR000160 GGDEF domain APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 Gene3D G3DSA:3.30.450.20 495 618 7.3E-28 T 28-03-2018 APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 623 742 2.1E-7 T 28-03-2018 IPR000014 PAS domain APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 500 622 7.3E-25 T 28-03-2018 IPR000014 PAS domain APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 362 494 4.2E-13 T 28-03-2018 IPR000014 PAS domain APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 SUPERFAMILY SSF55785 612 736 7.72E-19 T 28-03-2018 IPR000014 PAS domain APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 Gene3D G3DSA:3.30.450.20 357 494 6.3E-25 T 28-03-2018 APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 Gene3D G3DSA:3.30.450.20 619 747 1.1E-22 T 28-03-2018 APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 SUPERFAMILY SSF55785 506 616 8.38E-24 T 28-03-2018 IPR000014 PAS domain APY29_RS19940 e6372fd8a127df12d619c8f80d0dfa5a 913 SUPERFAMILY SSF55781 88 222 7.69E-25 T 28-03-2018 IPR029016 GAF domain-like APY29_RS19635 986546761b7e42a099ad85a85b41776c 727 SMART SM00245 330 550 1.0E-51 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 APY29_RS19635 986546761b7e42a099ad85a85b41776c 727 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 207 569 7.6E-91 T 28-03-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 APY29_RS19635 986546761b7e42a099ad85a85b41776c 727 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 553 702 8.5E-39 T 28-03-2018 IPR020992 Tail specific protease, C-terminal APY29_RS19635 986546761b7e42a099ad85a85b41776c 727 SUPERFAMILY SSF50156 230 342 2.11E-13 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS19635 986546761b7e42a099ad85a85b41776c 727 Gene3D G3DSA:3.90.226.10 354 648 7.1E-55 T 28-03-2018 APY29_RS19635 986546761b7e42a099ad85a85b41776c 727 Pfam PF03572 Peptidase family S41 366 548 1.8E-52 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 APY29_RS19635 986546761b7e42a099ad85a85b41776c 727 Gene3D G3DSA:3.30.750.44 156 246 1.6E-20 T 28-03-2018 APY29_RS19635 986546761b7e42a099ad85a85b41776c 727 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 242 320 1.3E-13 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS19635 986546761b7e42a099ad85a85b41776c 727 Gene3D G3DSA:2.30.42.10 247 346 1.1E-17 T 28-03-2018 APY29_RS19635 986546761b7e42a099ad85a85b41776c 727 SMART SM00228 247 325 5.9E-10 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS19635 986546761b7e42a099ad85a85b41776c 727 SUPERFAMILY SSF52096 165 265 4.97E-68 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS19635 986546761b7e42a099ad85a85b41776c 727 SUPERFAMILY SSF52096 360 555 4.97E-68 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS13545 8de57ff199202cada65c272a590f23b4 835 Pfam PF13840 ACT domain 409 469 2.0E-7 T 28-03-2018 IPR027795 GATS-like ACT domain APY29_RS13545 8de57ff199202cada65c272a590f23b4 835 Pfam PF13840 ACT domain 328 389 5.3E-8 T 28-03-2018 IPR027795 GATS-like ACT domain APY29_RS13545 8de57ff199202cada65c272a590f23b4 835 Gene3D G3DSA:3.30.360.10 651 808 3.6E-57 T 28-03-2018 APY29_RS13545 8de57ff199202cada65c272a590f23b4 835 SUPERFAMILY SSF55021 402 488 5.24E-21 T 28-03-2018 APY29_RS13545 8de57ff199202cada65c272a590f23b4 835 Gene3D G3DSA:3.30.70.260 310 400 3.6E-22 T 28-03-2018 APY29_RS13545 8de57ff199202cada65c272a590f23b4 835 SUPERFAMILY SSF53633 21 313 2.34E-73 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase APY29_RS13545 8de57ff199202cada65c272a590f23b4 835 SUPERFAMILY SSF55021 320 396 3.27E-20 T 28-03-2018 APY29_RS13545 8de57ff199202cada65c272a590f23b4 835 SUPERFAMILY SSF51735 479 651 3.95E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS13545 8de57ff199202cada65c272a590f23b4 835 ProSitePatterns PS00324 Aspartokinase signature. 22 30 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 APY29_RS13545 8de57ff199202cada65c272a590f23b4 835 Gene3D G3DSA:3.30.70.260 401 479 2.0E-18 T 28-03-2018 APY29_RS13545 8de57ff199202cada65c272a590f23b4 835 PIRSF PIRSF000727 20 832 0.0 T 28-03-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 APY29_RS13545 8de57ff199202cada65c272a590f23b4 835 Pfam PF00696 Amino acid kinase family 20 300 1.7E-42 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase APY29_RS13545 8de57ff199202cada65c272a590f23b4 835 SUPERFAMILY SSF55347 629 812 3.14E-48 T 28-03-2018 APY29_RS13545 8de57ff199202cada65c272a590f23b4 835 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 675 697 - T 28-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 APY29_RS13545 8de57ff199202cada65c272a590f23b4 835 Pfam PF00742 Homoserine dehydrogenase 629 825 2.7E-50 T 28-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 APY29_RS13545 8de57ff199202cada65c272a590f23b4 835 Gene3D G3DSA:3.40.50.720 480 650 6.9E-33 T 28-03-2018 APY29_RS13545 8de57ff199202cada65c272a590f23b4 835 Gene3D G3DSA:3.40.1160.10 9 309 2.1E-61 T 28-03-2018 APY29_RS13545 8de57ff199202cada65c272a590f23b4 835 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 487 621 4.1E-22 T 28-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 APY29_RS13545 8de57ff199202cada65c272a590f23b4 835 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 20 474 1.3E-107 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 APY29_RS09795 0996ae60c070a47305e5d34b9433066d 400 Gene3D G3DSA:1.10.287.470 150 202 5.5E-6 T 28-03-2018 APY29_RS09795 0996ae60c070a47305e5d34b9433066d 400 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 364 379 2.9E-6 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APY29_RS09795 0996ae60c070a47305e5d34b9433066d 400 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 92 112 2.9E-6 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APY29_RS09795 0996ae60c070a47305e5d34b9433066d 400 Gene3D G3DSA:1.20.1600.10 203 400 9.4E-18 T 28-03-2018 APY29_RS09795 0996ae60c070a47305e5d34b9433066d 400 Pfam PF13533 Biotin-lipoyl like 81 129 2.9E-16 T 28-03-2018 APY29_RS09795 0996ae60c070a47305e5d34b9433066d 400 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 192 323 2.2E-15 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APY29_RS09795 0996ae60c070a47305e5d34b9433066d 400 SUPERFAMILY SSF111369 190 319 8.89E-11 T 28-03-2018 APY29_RS09795 0996ae60c070a47305e5d34b9433066d 400 Gene3D G3DSA:2.40.50.100 80 149 5.1E-17 T 28-03-2018 APY29_RS09795 0996ae60c070a47305e5d34b9433066d 400 SUPERFAMILY SSF111369 80 170 1.06E-12 T 28-03-2018 APY29_RS12715 1494627c870613f7328740d66e334210 372 Pfam PF02119 Flagellar P-ring protein 28 371 3.0E-135 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APY29_RS12715 1494627c870613f7328740d66e334210 372 Hamap MF_00416 Flagellar P-ring protein [flgI]. 9 372 37.821 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APY29_RS12715 1494627c870613f7328740d66e334210 372 PRINTS PR01010 Flagellar P-ring protein signature 169 187 2.1E-77 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APY29_RS12715 1494627c870613f7328740d66e334210 372 PRINTS PR01010 Flagellar P-ring protein signature 28 43 2.1E-77 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APY29_RS12715 1494627c870613f7328740d66e334210 372 PRINTS PR01010 Flagellar P-ring protein signature 63 78 2.1E-77 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APY29_RS12715 1494627c870613f7328740d66e334210 372 PRINTS PR01010 Flagellar P-ring protein signature 43 58 2.1E-77 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APY29_RS12715 1494627c870613f7328740d66e334210 372 PRINTS PR01010 Flagellar P-ring protein signature 111 128 2.1E-77 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APY29_RS12715 1494627c870613f7328740d66e334210 372 PRINTS PR01010 Flagellar P-ring protein signature 195 213 2.1E-77 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APY29_RS12715 1494627c870613f7328740d66e334210 372 PRINTS PR01010 Flagellar P-ring protein signature 89 108 2.1E-77 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APY29_RS12715 1494627c870613f7328740d66e334210 372 PRINTS PR01010 Flagellar P-ring protein signature 259 271 2.1E-77 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APY29_RS12715 1494627c870613f7328740d66e334210 372 PRINTS PR01010 Flagellar P-ring protein signature 128 146 2.1E-77 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APY29_RS08690 ad4993a22b18034edc593d73eb4482e9 449 SUPERFAMILY SSF53738 158 258 1.92E-27 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS08690 ad4993a22b18034edc593d73eb4482e9 449 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 448 44.795 T 28-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS08690 ad4993a22b18034edc593d73eb4482e9 449 Gene3D G3DSA:3.30.310.50 376 448 5.0E-15 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS08690 ad4993a22b18034edc593d73eb4482e9 449 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 446 2.5E-191 T 28-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS08690 ad4993a22b18034edc593d73eb4482e9 449 SUPERFAMILY SSF55957 360 448 1.83E-16 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS08690 ad4993a22b18034edc593d73eb4482e9 449 Gene3D G3DSA:3.40.120.10 3 156 1.9E-48 T 28-03-2018 APY29_RS08690 ad4993a22b18034edc593d73eb4482e9 449 Gene3D G3DSA:3.40.120.10 157 271 6.4E-29 T 28-03-2018 APY29_RS08690 ad4993a22b18034edc593d73eb4482e9 449 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 368 6.9E-28 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS08690 ad4993a22b18034edc593d73eb4482e9 449 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 137 5.2E-43 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS08690 ad4993a22b18034edc593d73eb4482e9 449 SUPERFAMILY SSF53738 260 366 2.83E-27 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS08690 ad4993a22b18034edc593d73eb4482e9 449 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS08690 ad4993a22b18034edc593d73eb4482e9 449 SUPERFAMILY SSF53738 3 167 8.63E-47 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS08690 ad4993a22b18034edc593d73eb4482e9 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 5.6E-12 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS08690 ad4993a22b18034edc593d73eb4482e9 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 5.6E-12 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS08690 ad4993a22b18034edc593d73eb4482e9 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 5.6E-12 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS08690 ad4993a22b18034edc593d73eb4482e9 449 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 256 4.1E-17 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS08690 ad4993a22b18034edc593d73eb4482e9 449 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 443 4.0E-11 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS08690 ad4993a22b18034edc593d73eb4482e9 449 Gene3D G3DSA:3.40.120.10 272 375 4.6E-25 T 28-03-2018 APY29_RS17015 196dde2eeed63d576da21e1579fadb57 1065 Pfam PF02811 PHP domain 32 140 1.3E-14 T 28-03-2018 IPR004013 PHP domain GO:0003824 APY29_RS17015 196dde2eeed63d576da21e1579fadb57 1065 Gene3D G3DSA:2.40.50.140 930 1058 8.2E-7 T 28-03-2018 APY29_RS17015 196dde2eeed63d576da21e1579fadb57 1065 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 31 897 3.2E-157 T 28-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS17015 196dde2eeed63d576da21e1579fadb57 1065 SUPERFAMILY SSF89550 30 108 9.42E-10 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 APY29_RS17015 196dde2eeed63d576da21e1579fadb57 1065 SUPERFAMILY SSF89550 148 217 9.42E-10 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 APY29_RS17015 196dde2eeed63d576da21e1579fadb57 1065 Gene3D G3DSA:3.20.20.140 29 258 3.3E-34 T 28-03-2018 APY29_RS17015 196dde2eeed63d576da21e1579fadb57 1065 SMART SM00481 31 98 4.2E-11 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal APY29_RS17015 196dde2eeed63d576da21e1579fadb57 1065 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 298 721 4.5E-144 T 28-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS17015 196dde2eeed63d576da21e1579fadb57 1065 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 30 1065 13.055 T 28-03-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS17015 196dde2eeed63d576da21e1579fadb57 1065 Pfam PF14579 Helix-hairpin-helix motif 801 897 1.8E-20 T 28-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS16850 16fba76163558266b139c89d4c12c8de 269 SUPERFAMILY SSF52540 4 267 1.95E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS16850 16fba76163558266b139c89d4c12c8de 269 Gene3D G3DSA:3.40.50.300 1 259 1.8E-53 T 28-03-2018 APY29_RS16850 16fba76163558266b139c89d4c12c8de 269 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 226 7.3E-23 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain APY29_RS16850 16fba76163558266b139c89d4c12c8de 269 PIRSF PIRSF003092 1 269 3.7E-90 T 28-03-2018 IPR025501 ATP binding protein MinD APY29_RS16850 16fba76163558266b139c89d4c12c8de 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 266 6.4E-110 T 28-03-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 APY29_RS13990 4851f8e88910ff8bbe5b4453508a2f33 213 SUPERFAMILY SSF51306 88 210 5.58E-33 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C APY29_RS13990 4851f8e88910ff8bbe5b4453508a2f33 213 Pfam PF01726 LexA DNA binding domain 2 64 2.4E-18 T 28-03-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 APY29_RS13990 4851f8e88910ff8bbe5b4453508a2f33 213 SUPERFAMILY SSF46785 1 68 1.9E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS13990 4851f8e88910ff8bbe5b4453508a2f33 213 Gene3D G3DSA:1.10.10.10 1 67 4.8E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS13990 4851f8e88910ff8bbe5b4453508a2f33 213 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 125 135 1.5E-8 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APY29_RS13990 4851f8e88910ff8bbe5b4453508a2f33 213 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 164 176 1.5E-8 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APY29_RS13990 4851f8e88910ff8bbe5b4453508a2f33 213 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 136 147 1.5E-8 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APY29_RS13990 4851f8e88910ff8bbe5b4453508a2f33 213 Gene3D G3DSA:2.10.109.10 94 211 1.2E-19 T 28-03-2018 APY29_RS13990 4851f8e88910ff8bbe5b4453508a2f33 213 TIGRFAM TIGR00498 lexA: repressor LexA 2 211 2.9E-52 T 28-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 APY29_RS13990 4851f8e88910ff8bbe5b4453508a2f33 213 Pfam PF00717 Peptidase S24-like 128 193 2.7E-14 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C APY29_RS13990 4851f8e88910ff8bbe5b4453508a2f33 213 Hamap MF_00015 LexA repressor [lexA]. 2 212 29.559 T 28-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 APY29_RS07520 49353eb47997ed9c8f4731cef2bb9503 213 Gene3D G3DSA:2.70.70.10 59 206 9.5E-29 T 28-03-2018 APY29_RS07520 49353eb47997ed9c8f4731cef2bb9503 213 SUPERFAMILY SSF51261 83 204 2.98E-29 T 28-03-2018 IPR011055 Duplicated hybrid motif APY29_RS07520 49353eb47997ed9c8f4731cef2bb9503 213 Pfam PF01551 Peptidase family M23 102 200 1.0E-19 T 28-03-2018 IPR016047 Peptidase M23 APY29_RS11085 8631f6c8013cba846e5ab30c0c8910d3 362 Gene3D G3DSA:3.40.50.300 2 243 4.0E-68 T 28-03-2018 APY29_RS11085 8631f6c8013cba846e5ab30c0c8910d3 362 SMART SM00382 29 212 5.0E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS11085 8631f6c8013cba846e5ab30c0c8910d3 362 SUPERFAMILY SSF52540 4 243 4.91E-82 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11085 8631f6c8013cba846e5ab30c0c8910d3 362 SUPERFAMILY SSF50331 237 359 9.23E-30 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal APY29_RS11085 8631f6c8013cba846e5ab30c0c8910d3 362 Gene3D G3DSA:2.40.50.140 290 344 1.9E-16 T 28-03-2018 APY29_RS11085 8631f6c8013cba846e5ab30c0c8910d3 362 Pfam PF08402 TOBE domain 281 351 5.5E-9 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APY29_RS11085 8631f6c8013cba846e5ab30c0c8910d3 362 Pfam PF00005 ABC transporter 21 162 9.3E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS11085 8631f6c8013cba846e5ab30c0c8910d3 362 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS11085 8631f6c8013cba846e5ab30c0c8910d3 362 Gene3D G3DSA:2.40.50.100 244 289 1.4E-10 T 28-03-2018 APY29_RS09445 6cdbc80f44ae75307a47977f1e0d7bfe 964 Pfam PF00593 TonB dependent receptor 372 963 1.3E-48 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS09445 6cdbc80f44ae75307a47977f1e0d7bfe 964 Gene3D G3DSA:2.170.130.10 44 185 1.2E-33 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS09445 6cdbc80f44ae75307a47977f1e0d7bfe 964 Gene3D G3DSA:2.40.170.20 189 964 6.0E-67 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS09445 6cdbc80f44ae75307a47977f1e0d7bfe 964 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 61 - T 28-03-2018 IPR010916 TonB box, conserved site APY29_RS09445 6cdbc80f44ae75307a47977f1e0d7bfe 964 SUPERFAMILY SSF56935 319 646 1.28E-97 T 28-03-2018 APY29_RS09445 6cdbc80f44ae75307a47977f1e0d7bfe 964 SUPERFAMILY SSF56935 698 744 1.28E-97 T 28-03-2018 APY29_RS09445 6cdbc80f44ae75307a47977f1e0d7bfe 964 SUPERFAMILY SSF56935 774 964 1.28E-97 T 28-03-2018 APY29_RS09445 6cdbc80f44ae75307a47977f1e0d7bfe 964 SUPERFAMILY SSF56935 45 234 1.28E-97 T 28-03-2018 APY29_RS09445 6cdbc80f44ae75307a47977f1e0d7bfe 964 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 174 3.0E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS06750 595a2f94955f7d38a08f7b41522dc6ba 890 Pfam PF00593 TonB dependent receptor 418 889 7.2E-38 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS06750 595a2f94955f7d38a08f7b41522dc6ba 890 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 42 890 6.9E-232 T 28-03-2018 IPR010104 Bacterial TonB-dependent receptor APY29_RS06750 595a2f94955f7d38a08f7b41522dc6ba 890 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 173 1.4E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS06750 595a2f94955f7d38a08f7b41522dc6ba 890 Gene3D G3DSA:2.170.130.10 34 174 1.3E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS06750 595a2f94955f7d38a08f7b41522dc6ba 890 SUPERFAMILY SSF56935 280 507 1.68E-96 T 28-03-2018 APY29_RS06750 595a2f94955f7d38a08f7b41522dc6ba 890 SUPERFAMILY SSF56935 541 890 1.68E-96 T 28-03-2018 APY29_RS06750 595a2f94955f7d38a08f7b41522dc6ba 890 SUPERFAMILY SSF56935 31 239 1.68E-96 T 28-03-2018 APY29_RS06750 595a2f94955f7d38a08f7b41522dc6ba 890 Gene3D G3DSA:2.40.170.20 175 890 7.9E-74 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS19390 55d8673e0eb3edc44111997811cfe186 556 Pfam PF05199 GMC oxidoreductase 395 529 2.6E-40 T 28-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 APY29_RS19390 55d8673e0eb3edc44111997811cfe186 556 PIRSF PIRSF000137 1 539 1.0E-134 T 28-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 APY29_RS19390 55d8673e0eb3edc44111997811cfe186 556 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 556 60.441 T 28-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 APY29_RS19390 55d8673e0eb3edc44111997811cfe186 556 SUPERFAMILY SSF51905 478 538 7.05E-86 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS19390 55d8673e0eb3edc44111997811cfe186 556 SUPERFAMILY SSF51905 1 295 7.05E-86 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS19390 55d8673e0eb3edc44111997811cfe186 556 SUPERFAMILY SSF54373 297 479 5.1E-61 T 28-03-2018 APY29_RS19390 55d8673e0eb3edc44111997811cfe186 556 Gene3D G3DSA:4.10.450.10 40 104 1.1E-24 T 28-03-2018 APY29_RS19390 55d8673e0eb3edc44111997811cfe186 556 Gene3D G3DSA:3.30.560.10 105 492 1.4E-95 T 28-03-2018 APY29_RS19390 55d8673e0eb3edc44111997811cfe186 556 Pfam PF00732 GMC oxidoreductase 5 302 9.2E-97 T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 APY29_RS19390 55d8673e0eb3edc44111997811cfe186 556 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 539 2.9E-272 T 28-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 APY29_RS19390 55d8673e0eb3edc44111997811cfe186 556 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 84 107 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 APY29_RS19390 55d8673e0eb3edc44111997811cfe186 556 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 261 275 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 APY29_RS15325 146f45cea623ede389e00b9b8013bd9b 396 SUPERFAMILY SSF111369 56 302 1.7E-72 T 28-03-2018 APY29_RS15325 146f45cea623ede389e00b9b8013bd9b 396 Gene3D G3DSA:2.40.50.100 13 94 1.5E-7 T 28-03-2018 APY29_RS15325 146f45cea623ede389e00b9b8013bd9b 396 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 298 9.6E-15 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APY29_RS15325 146f45cea623ede389e00b9b8013bd9b 396 Gene3D G3DSA:1.20.1600.10 95 365 5.3E-18 T 28-03-2018 APY29_RS15325 146f45cea623ede389e00b9b8013bd9b 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 379 3.4E-82 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 APY29_RS18365 20f25499c2bcb250cef6b8f49ca42d75 286 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 5 278 45.149 T 28-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 APY29_RS18365 20f25499c2bcb250cef6b8f49ca42d75 286 Gene3D G3DSA:3.40.50.150 87 279 9.5E-45 T 28-03-2018 APY29_RS18365 20f25499c2bcb250cef6b8f49ca42d75 286 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 18 278 1.1E-72 T 28-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 APY29_RS18365 20f25499c2bcb250cef6b8f49ca42d75 286 SUPERFAMILY SSF53335 20 276 3.62E-57 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS18365 20f25499c2bcb250cef6b8f49ca42d75 286 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 183 189 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APY29_RS18365 20f25499c2bcb250cef6b8f49ca42d75 286 Gene3D G3DSA:1.10.8.10 9 86 2.5E-18 T 28-03-2018 APY29_RS18365 20f25499c2bcb250cef6b8f49ca42d75 286 Pfam PF05175 Methyltransferase small domain 103 196 8.4E-17 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 APY29_RS18365 20f25499c2bcb250cef6b8f49ca42d75 286 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 25 274 4.9E-90 T 28-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 APY29_RS18080 7aa8786140ad5fa0aa219eed34f3f70e 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 2.1E-67 T 28-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS18080 7aa8786140ad5fa0aa219eed34f3f70e 124 SUPERFAMILY SSF50249 3 123 8.57E-50 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS18080 7aa8786140ad5fa0aa219eed34f3f70e 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.422 T 28-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS18080 7aa8786140ad5fa0aa219eed34f3f70e 124 PIRSF PIRSF002133 1 124 9.3E-54 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18080 7aa8786140ad5fa0aa219eed34f3f70e 124 Gene3D G3DSA:2.40.50.140 1 124 8.5E-62 T 28-03-2018 APY29_RS18080 7aa8786140ad5fa0aa219eed34f3f70e 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 3.0E-40 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18080 7aa8786140ad5fa0aa219eed34f3f70e 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18080 7aa8786140ad5fa0aa219eed34f3f70e 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.9E-58 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18080 7aa8786140ad5fa0aa219eed34f3f70e 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.9E-58 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18080 7aa8786140ad5fa0aa219eed34f3f70e 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.9E-58 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18080 7aa8786140ad5fa0aa219eed34f3f70e 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.9E-58 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18080 7aa8786140ad5fa0aa219eed34f3f70e 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.9E-58 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18080 7aa8786140ad5fa0aa219eed34f3f70e 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.9E-58 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 73 339 4.9E-45 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 2 624 42.838 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 PRINTS PR01180 Arginine decarboxylase signature 64 79 1.2E-67 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 PRINTS PR01180 Arginine decarboxylase signature 168 189 1.2E-67 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 PRINTS PR01180 Arginine decarboxylase signature 534 555 1.2E-67 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 PRINTS PR01180 Arginine decarboxylase signature 456 477 1.2E-67 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 PRINTS PR01180 Arginine decarboxylase signature 88 102 1.2E-67 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 PRINTS PR01180 Arginine decarboxylase signature 142 157 1.2E-67 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 PRINTS PR01180 Arginine decarboxylase signature 319 336 1.2E-67 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 PRINTS PR01180 Arginine decarboxylase signature 192 214 1.2E-67 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 PRINTS PR01180 Arginine decarboxylase signature 481 506 1.2E-67 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 Gene3D G3DSA:2.40.37.10 1 78 3.2E-14 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 Gene3D G3DSA:2.40.37.10 385 571 1.3E-61 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 SUPERFAMILY SSF50621 448 558 9.52E-7 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 PIRSF PIRSF001336 1 625 5.9E-241 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 270 286 - T 28-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 SUPERFAMILY SSF51419 64 341 1.29E-62 T 28-03-2018 IPR029066 PLP-binding barrel APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 Gene3D G3DSA:3.20.20.10 79 339 5.4E-38 T 28-03-2018 IPR029066 PLP-binding barrel APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 TIGRFAM TIGR01273 speA: arginine decarboxylase 4 623 1.4E-261 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 329 348 2.2E-15 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 96 114 2.2E-15 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 235 248 2.2E-15 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 534 547 2.2E-15 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 APY29_RS02480 18ca9b69497c2c910a97c2a093ce9c14 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 119 131 2.2E-15 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 APY29_RS18765 870037ed2799bbbf57113bd22cc3085a 199 ProSitePatterns PS00211 ABC transporters family signature. 114 128 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS18765 870037ed2799bbbf57113bd22cc3085a 199 Gene3D G3DSA:3.40.50.300 1 199 1.0E-57 T 28-03-2018 APY29_RS18765 870037ed2799bbbf57113bd22cc3085a 199 Pfam PF00005 ABC transporter 1 141 2.0E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS18765 870037ed2799bbbf57113bd22cc3085a 199 SUPERFAMILY SSF52540 1 195 3.42E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS18765 870037ed2799bbbf57113bd22cc3085a 199 SMART SM00382 5 189 1.6E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS20080 697f90c726b48e535bc72e2fbe9494c0 111 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 14 97 1.3E-19 T 28-03-2018 IPR023845 Domain of unknown function DUF3817, transmembrane APY29_RS20080 697f90c726b48e535bc72e2fbe9494c0 111 Pfam PF12823 Domain of unknown function (DUF3817) 13 99 8.6E-19 T 28-03-2018 IPR023845 Domain of unknown function DUF3817, transmembrane APY29_RS14070 a6e5ce5c7f9a5907f62ede14f56ad560 369 Gene3D G3DSA:3.30.2340.10 168 317 7.1E-31 T 28-03-2018 APY29_RS14070 a6e5ce5c7f9a5907f62ede14f56ad560 369 SUPERFAMILY SSF55120 5 353 1.32E-89 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS14070 a6e5ce5c7f9a5907f62ede14f56ad560 369 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 5 357 29.088 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS14070 a6e5ce5c7f9a5907f62ede14f56ad560 369 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 18 169 1.7E-37 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS14070 a6e5ce5c7f9a5907f62ede14f56ad560 369 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 198 351 4.8E-17 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS14070 a6e5ce5c7f9a5907f62ede14f56ad560 369 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 77 90 - T 28-03-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 APY29_RS18210 c4ba1621b23c5a6b2286bd45d1bfbd9b 260 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 4 227 5.2E-94 T 28-03-2018 IPR022488 Polyphosphate kinase-2-related APY29_RS18210 c4ba1621b23c5a6b2286bd45d1bfbd9b 260 Gene3D G3DSA:3.40.50.300 1 246 4.5E-89 T 28-03-2018 APY29_RS18210 c4ba1621b23c5a6b2286bd45d1bfbd9b 260 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 4 226 3.9E-105 T 28-03-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 APY29_RS18210 c4ba1621b23c5a6b2286bd45d1bfbd9b 260 SUPERFAMILY SSF52540 35 222 9.8E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS18210 c4ba1621b23c5a6b2286bd45d1bfbd9b 260 PIRSF PIRSF028756 1 253 5.3E-116 T 28-03-2018 IPR016898 Polyphosphate kinase 2 APY29_RS12850 6b077ac8c55b91b7260e9dc6b6775f82 574 Pfam PF08345 Flagellar M-ring protein C-terminal 263 439 1.1E-45 T 28-03-2018 IPR013556 Flagellar M-ring C-terminal APY29_RS12850 6b077ac8c55b91b7260e9dc6b6775f82 574 PIRSF PIRSF004862 6 574 8.5E-135 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 APY29_RS12850 6b077ac8c55b91b7260e9dc6b6775f82 574 PRINTS PR01009 Flagellar M-ring protein signature 363 387 1.3E-32 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 APY29_RS12850 6b077ac8c55b91b7260e9dc6b6775f82 574 PRINTS PR01009 Flagellar M-ring protein signature 206 224 1.3E-32 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 APY29_RS12850 6b077ac8c55b91b7260e9dc6b6775f82 574 PRINTS PR01009 Flagellar M-ring protein signature 163 177 1.3E-32 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 APY29_RS12850 6b077ac8c55b91b7260e9dc6b6775f82 574 PRINTS PR01009 Flagellar M-ring protein signature 276 294 1.3E-32 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 APY29_RS12850 6b077ac8c55b91b7260e9dc6b6775f82 574 PRINTS PR01009 Flagellar M-ring protein signature 131 149 1.3E-32 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 APY29_RS12850 6b077ac8c55b91b7260e9dc6b6775f82 574 Gene3D G3DSA:3.30.70.1530 60 122 2.7E-5 T 28-03-2018 APY29_RS12850 6b077ac8c55b91b7260e9dc6b6775f82 574 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 12 573 2.0E-82 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 APY29_RS12850 6b077ac8c55b91b7260e9dc6b6775f82 574 Pfam PF01514 Secretory protein of YscJ/FliF family 39 230 4.6E-66 T 28-03-2018 IPR006182 Secretory protein YscJ/FliF APY29_RS04440 3dec87512ee12a04510adbf9ded160fd 611 PRINTS PR00723 Subtilisin serine protease family (S8) signature 429 445 8.7E-22 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS04440 3dec87512ee12a04510adbf9ded160fd 611 PRINTS PR00723 Subtilisin serine protease family (S8) signature 167 186 8.7E-22 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS04440 3dec87512ee12a04510adbf9ded160fd 611 PRINTS PR00723 Subtilisin serine protease family (S8) signature 235 248 8.7E-22 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS04440 3dec87512ee12a04510adbf9ded160fd 611 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 172 183 - T 28-03-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site APY29_RS04440 3dec87512ee12a04510adbf9ded160fd 611 Pfam PF00082 Subtilase family 167 472 2.8E-45 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS04440 3dec87512ee12a04510adbf9ded160fd 611 SUPERFAMILY SSF52743 232 497 2.23E-72 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS04440 3dec87512ee12a04510adbf9ded160fd 611 SUPERFAMILY SSF52743 153 203 2.23E-72 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS04440 3dec87512ee12a04510adbf9ded160fd 611 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 533 597 2.5E-7 T 28-03-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial APY29_RS04440 3dec87512ee12a04510adbf9ded160fd 611 Gene3D G3DSA:2.60.120.380 506 606 4.2E-9 T 28-03-2018 APY29_RS04440 3dec87512ee12a04510adbf9ded160fd 611 Gene3D G3DSA:3.40.50.200 102 500 7.0E-79 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS04440 3dec87512ee12a04510adbf9ded160fd 611 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 430 440 - T 28-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site APY29_RS16975 5e453905d12c63d4cb93f28c1ead12bf 405 Gene3D G3DSA:2.40.10.10 196 294 2.1E-7 T 28-03-2018 APY29_RS16975 5e453905d12c63d4cb93f28c1ead12bf 405 Gene3D G3DSA:2.40.10.10 295 392 1.1E-5 T 28-03-2018 APY29_RS16975 5e453905d12c63d4cb93f28c1ead12bf 405 Gene3D G3DSA:3.30.300.50 28 89 0.0016 T 28-03-2018 IPR035070 Streptogrisin prodomain APY29_RS16975 5e453905d12c63d4cb93f28c1ead12bf 405 SUPERFAMILY SSF50494 202 383 2.88E-13 T 28-03-2018 IPR009003 Peptidase S1, PA clan APY29_RS02435 ed6c48f0a8a0704ef430699881cc24d5 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 1.7E-6 T 28-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 APY29_RS02435 ed6c48f0a8a0704ef430699881cc24d5 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 1.7E-6 T 28-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 APY29_RS02435 ed6c48f0a8a0704ef430699881cc24d5 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 1.7E-6 T 28-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 APY29_RS02435 ed6c48f0a8a0704ef430699881cc24d5 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 341 353 1.7E-6 T 28-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 APY29_RS02435 ed6c48f0a8a0704ef430699881cc24d5 506 SMART SM00382 210 392 8.0E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS02435 ed6c48f0a8a0704ef430699881cc24d5 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.5E-45 T 28-03-2018 APY29_RS02435 ed6c48f0a8a0704ef430699881cc24d5 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 394 1.4E-96 T 28-03-2018 IPR000523 Magnesium chelatase ChlI domain APY29_RS02435 ed6c48f0a8a0704ef430699881cc24d5 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 494 2.0E-193 T 28-03-2018 IPR004482 Mg chelatase-related protein APY29_RS02435 ed6c48f0a8a0704ef430699881cc24d5 506 Gene3D G3DSA:3.30.230.10 3 186 3.6E-41 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APY29_RS02435 ed6c48f0a8a0704ef430699881cc24d5 506 SUPERFAMILY SSF52540 190 497 4.86E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS02435 ed6c48f0a8a0704ef430699881cc24d5 506 SUPERFAMILY SSF54211 9 169 9.48E-32 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS02435 ed6c48f0a8a0704ef430699881cc24d5 506 Gene3D G3DSA:3.40.50.300 191 437 2.3E-20 T 28-03-2018 APY29_RS02435 ed6c48f0a8a0704ef430699881cc24d5 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 402 494 1.1E-29 T 28-03-2018 IPR025158 Mg chelatase-related protein, C-terminal domain APY29_RS13210 70a0f5e7ddc5eeb791903cbc7b05f754 358 Pfam PF01339 CheB methylesterase 172 350 1.3E-56 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APY29_RS13210 70a0f5e7ddc5eeb791903cbc7b05f754 358 SMART SM00448 7 130 2.6E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS13210 70a0f5e7ddc5eeb791903cbc7b05f754 358 Gene3D G3DSA:3.40.50.180 167 358 4.7E-74 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APY29_RS13210 70a0f5e7ddc5eeb791903cbc7b05f754 358 SUPERFAMILY SSF52172 6 111 1.85E-28 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS13210 70a0f5e7ddc5eeb791903cbc7b05f754 358 SUPERFAMILY SSF52738 167 354 1.83E-69 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APY29_RS13210 70a0f5e7ddc5eeb791903cbc7b05f754 358 PIRSF PIRSF000876 4 358 7.3E-135 T 28-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APY29_RS13210 70a0f5e7ddc5eeb791903cbc7b05f754 358 Gene3D G3DSA:3.40.50.2300 1 166 2.5E-29 T 28-03-2018 APY29_RS13210 70a0f5e7ddc5eeb791903cbc7b05f754 358 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 7 355 40.718 T 28-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APY29_RS13210 70a0f5e7ddc5eeb791903cbc7b05f754 358 Pfam PF00072 Response regulator receiver domain 9 111 9.1E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS16180 e739a0b5a45c16bb25572496a3809457 298 SUPERFAMILY SSF89069 17 84 8.24E-15 T 28-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 APY29_RS16180 e739a0b5a45c16bb25572496a3809457 298 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 18 93 7.5E-16 T 28-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 APY29_RS06260 61e0b07ae5ba33fcd0731cc27319afe5 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 4.0E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS06260 61e0b07ae5ba33fcd0731cc27319afe5 291 Gene3D G3DSA:3.40.190.10 179 259 5.6E-19 T 28-03-2018 APY29_RS06260 61e0b07ae5ba33fcd0731cc27319afe5 291 SUPERFAMILY SSF46785 3 86 5.66E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS06260 61e0b07ae5ba33fcd0731cc27319afe5 291 SUPERFAMILY SSF53850 93 286 2.9E-37 T 28-03-2018 APY29_RS06260 61e0b07ae5ba33fcd0731cc27319afe5 291 Gene3D G3DSA:3.40.190.10 90 178 1.9E-20 T 28-03-2018 APY29_RS06260 61e0b07ae5ba33fcd0731cc27319afe5 291 Gene3D G3DSA:1.10.10.10 1 89 1.3E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS06260 61e0b07ae5ba33fcd0731cc27319afe5 291 Pfam PF03466 LysR substrate binding domain 92 286 1.4E-38 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS06260 61e0b07ae5ba33fcd0731cc27319afe5 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.8E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS06260 61e0b07ae5ba33fcd0731cc27319afe5 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.8E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS06260 61e0b07ae5ba33fcd0731cc27319afe5 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.8E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS21255 a3199f8560efc72fc2faa60d701199ab 286 SUPERFAMILY SSF55781 111 285 4.46E-49 T 28-03-2018 IPR029016 GAF domain-like APY29_RS21255 a3199f8560efc72fc2faa60d701199ab 286 Pfam PF01614 Bacterial transcriptional regulator 158 281 2.6E-36 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal APY29_RS21255 a3199f8560efc72fc2faa60d701199ab 286 Gene3D G3DSA:1.10.10.10 33 111 3.4E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS21255 a3199f8560efc72fc2faa60d701199ab 286 Gene3D G3DSA:3.30.450.40 112 286 6.5E-53 T 28-03-2018 IPR029016 GAF domain-like APY29_RS21255 a3199f8560efc72fc2faa60d701199ab 286 SMART SM00346 42 130 1.4E-18 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APY29_RS21255 a3199f8560efc72fc2faa60d701199ab 286 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 39 284 1.2E-93 T 28-03-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 APY29_RS21255 a3199f8560efc72fc2faa60d701199ab 286 SUPERFAMILY SSF46785 43 112 1.95E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS21255 a3199f8560efc72fc2faa60d701199ab 286 Pfam PF09339 IclR helix-turn-helix domain 44 92 3.5E-12 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APY29_RS22040 e1646af5e4b8a8effc64ee88b6176ae4 127 Pfam PF03692 Putative zinc- or iron-chelating domain 4 97 9.5E-13 T 28-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein APY29_RS08880 8e1a3d907d1b17cf09939da524bfa7d7 106 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 101 2.7E-41 T 28-03-2018 IPR004480 Monothiol glutaredoxin-related APY29_RS08880 8e1a3d907d1b17cf09939da524bfa7d7 106 Gene3D G3DSA:3.40.30.10 1 106 3.4E-27 T 28-03-2018 APY29_RS08880 8e1a3d907d1b17cf09939da524bfa7d7 106 Pfam PF00462 Glutaredoxin 16 81 9.2E-17 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APY29_RS08880 8e1a3d907d1b17cf09939da524bfa7d7 106 SUPERFAMILY SSF52833 2 102 2.93E-30 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS08880 8e1a3d907d1b17cf09939da524bfa7d7 106 PIRSF PIRSF005894 1 106 2.1E-46 T 28-03-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 APY29_RS17750 a5eaa83965744da37b8ee26f26baf210 432 Pfam PF08245 Mur ligase middle domain 48 272 1.2E-10 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 APY29_RS17750 a5eaa83965744da37b8ee26f26baf210 432 SUPERFAMILY SSF53244 296 426 8.55E-26 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 APY29_RS17750 a5eaa83965744da37b8ee26f26baf210 432 Gene3D G3DSA:3.40.1190.10 1 295 1.8E-76 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 APY29_RS17750 a5eaa83965744da37b8ee26f26baf210 432 PIRSF PIRSF001563 3 432 1.1E-100 T 28-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 APY29_RS17750 a5eaa83965744da37b8ee26f26baf210 432 Gene3D G3DSA:3.90.190.20 296 432 1.4E-25 T 28-03-2018 APY29_RS17750 a5eaa83965744da37b8ee26f26baf210 432 SUPERFAMILY SSF53623 5 293 2.75E-84 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 APY29_RS17750 a5eaa83965744da37b8ee26f26baf210 432 TIGRFAM TIGR01499 folC: bifunctional protein FolC 26 425 4.0E-95 T 28-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 APY29_RS10505 f284e82ee3e4cbc45dcefc937a10c97f 284 Pfam PF05096 Glutamine cyclotransferase 51 282 4.1E-92 T 28-03-2018 IPR007788 Glutaminyl-peptide cyclotransferase GO:0016603|GO:0017186 APY29_RS10505 f284e82ee3e4cbc45dcefc937a10c97f 284 Gene3D G3DSA:2.120.10.30 201 284 0.0091 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS10505 f284e82ee3e4cbc45dcefc937a10c97f 284 Gene3D G3DSA:2.130.10.10 72 200 2.1E-9 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS10505 f284e82ee3e4cbc45dcefc937a10c97f 284 SUPERFAMILY SSF50969 53 281 6.67E-21 T 28-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like APY29_RS14995 125f4f6a0dd9dffca54e5c2f74816c0b 917 Gene3D G3DSA:3.40.50.280 412 564 1.3E-53 T 28-03-2018 APY29_RS14995 125f4f6a0dd9dffca54e5c2f74816c0b 917 Gene3D G3DSA:3.20.20.20 12 310 2.5E-71 T 28-03-2018 APY29_RS14995 125f4f6a0dd9dffca54e5c2f74816c0b 917 Pfam PF02310 B12 binding domain 417 508 1.5E-19 T 28-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 APY29_RS14995 125f4f6a0dd9dffca54e5c2f74816c0b 917 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 608 897 1.1E-122 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 APY29_RS14995 125f4f6a0dd9dffca54e5c2f74816c0b 917 SUPERFAMILY SSF52242 413 563 8.63E-44 T 28-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 APY29_RS14995 125f4f6a0dd9dffca54e5c2f74816c0b 917 PIRSF PIRSF000381 1 885 0.0 T 28-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 APY29_RS14995 125f4f6a0dd9dffca54e5c2f74816c0b 917 SUPERFAMILY SSF56507 571 917 6.15E-129 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 APY29_RS14995 125f4f6a0dd9dffca54e5c2f74816c0b 917 Pfam PF02607 B12 binding domain 325 397 1.8E-26 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 APY29_RS14995 125f4f6a0dd9dffca54e5c2f74816c0b 917 Gene3D G3DSA:3.10.196.10 773 917 5.9E-61 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 APY29_RS14995 125f4f6a0dd9dffca54e5c2f74816c0b 917 SMART SM01018 322 405 9.6E-45 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 APY29_RS14995 125f4f6a0dd9dffca54e5c2f74816c0b 917 TIGRFAM TIGR02082 metH: methionine synthase 4 882 0.0 T 28-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 APY29_RS14995 125f4f6a0dd9dffca54e5c2f74816c0b 917 SUPERFAMILY SSF51717 23 297 1.31E-87 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 APY29_RS14995 125f4f6a0dd9dffca54e5c2f74816c0b 917 Gene3D G3DSA:1.10.288.10 608 664 4.7E-25 T 28-03-2018 APY29_RS14995 125f4f6a0dd9dffca54e5c2f74816c0b 917 SUPERFAMILY SSF47644 317 404 2.09E-28 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 APY29_RS14995 125f4f6a0dd9dffca54e5c2f74816c0b 917 Gene3D G3DSA:1.10.1240.10 311 405 3.0E-36 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 APY29_RS14995 125f4f6a0dd9dffca54e5c2f74816c0b 917 Pfam PF00809 Pterin binding enzyme 27 265 1.0E-60 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 APY29_RS14995 125f4f6a0dd9dffca54e5c2f74816c0b 917 Gene3D G3DSA:1.10.288.10 697 772 5.2E-21 T 28-03-2018 APY29_RS19935 74a8c566a9a550c0e4f74f1ec9ba2e38 734 Gene3D G3DSA:3.30.450.20 38 200 2.8E-40 T 28-03-2018 APY29_RS19935 74a8c566a9a550c0e4f74f1ec9ba2e38 734 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 578 607 1.6E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS19935 74a8c566a9a550c0e4f74f1ec9ba2e38 734 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 549 576 1.6E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS19935 74a8c566a9a550c0e4f74f1ec9ba2e38 734 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 472 501 1.6E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS19935 74a8c566a9a550c0e4f74f1ec9ba2e38 734 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 626 655 1.6E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS19935 74a8c566a9a550c0e4f74f1ec9ba2e38 734 SUPERFAMILY SSF158472 220 267 9.68E-9 T 28-03-2018 APY29_RS19935 74a8c566a9a550c0e4f74f1ec9ba2e38 734 SMART SM00304 398 450 0.074 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS19935 74a8c566a9a550c0e4f74f1ec9ba2e38 734 SMART SM00304 218 270 1.3E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS19935 74a8c566a9a550c0e4f74f1ec9ba2e38 734 Pfam PF00672 HAMP domain 220 267 1.4E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS19935 74a8c566a9a550c0e4f74f1ec9ba2e38 734 SMART SM01049 43 136 3.5E-28 T 28-03-2018 IPR033480 Single Cache domain 2 APY29_RS19935 74a8c566a9a550c0e4f74f1ec9ba2e38 734 SMART SM00283 451 698 2.8E-89 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS19935 74a8c566a9a550c0e4f74f1ec9ba2e38 734 Pfam PF17200 Single Cache domain 2 48 195 7.0E-38 T 28-03-2018 IPR033480 Single Cache domain 2 APY29_RS19935 74a8c566a9a550c0e4f74f1ec9ba2e38 734 Gene3D G3DSA:1.10.287.950 506 702 2.0E-48 T 28-03-2018 APY29_RS19935 74a8c566a9a550c0e4f74f1ec9ba2e38 734 Gene3D G3DSA:1.10.287.950 216 505 3.4E-21 T 28-03-2018 APY29_RS19935 74a8c566a9a550c0e4f74f1ec9ba2e38 734 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 514 665 2.8E-52 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS19935 74a8c566a9a550c0e4f74f1ec9ba2e38 734 SUPERFAMILY SSF58104 418 702 1.09E-71 T 28-03-2018 APY29_RS19640 bd2de66602f9452ac933ae17a7feac13 337 SUPERFAMILY SSF102114 66 329 1.7E-63 T 28-03-2018 APY29_RS19640 bd2de66602f9452ac933ae17a7feac13 337 SMART SM00729 97 305 4.1E-18 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APY29_RS19640 bd2de66602f9452ac933ae17a7feac13 337 TIGRFAM TIGR00510 lipA: lipoyl synthase 48 330 3.2E-132 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 APY29_RS19640 bd2de66602f9452ac933ae17a7feac13 337 Gene3D G3DSA:3.20.20.70 58 328 1.2E-26 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS19640 bd2de66602f9452ac933ae17a7feac13 337 PIRSF PIRSF005963 1 336 4.6E-138 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 APY29_RS19640 bd2de66602f9452ac933ae17a7feac13 337 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 49 86 1.5E-8 T 28-03-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 APY29_RS19640 bd2de66602f9452ac933ae17a7feac13 337 Pfam PF04055 Radical SAM superfamily 103 267 6.6E-15 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 APY29_RS19640 bd2de66602f9452ac933ae17a7feac13 337 Hamap MF_00206 Lipoyl synthase [lipA]. 50 337 150.553 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 APY29_RS05935 504753d31955de5f49bfbff82e73b4e9 537 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 529 6.3E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS05935 504753d31955de5f49bfbff82e73b4e9 537 SMART SM00387 423 532 6.6E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS05935 504753d31955de5f49bfbff82e73b4e9 537 Gene3D G3DSA:3.30.565.10 382 532 2.6E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS05935 504753d31955de5f49bfbff82e73b4e9 537 Pfam PF00512 His Kinase A (phospho-acceptor) domain 315 379 2.3E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS05935 504753d31955de5f49bfbff82e73b4e9 537 SUPERFAMILY SSF47384 312 379 2.35E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS05935 504753d31955de5f49bfbff82e73b4e9 537 SUPERFAMILY SSF55874 373 528 3.67E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS05935 504753d31955de5f49bfbff82e73b4e9 537 Gene3D G3DSA:1.10.287.130 310 377 9.6E-15 T 28-03-2018 APY29_RS05935 504753d31955de5f49bfbff82e73b4e9 537 SMART SM00388 315 381 9.4E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS05935 504753d31955de5f49bfbff82e73b4e9 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 510 2.6E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS05935 504753d31955de5f49bfbff82e73b4e9 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 491 2.6E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS05935 504753d31955de5f49bfbff82e73b4e9 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 477 2.6E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS05935 504753d31955de5f49bfbff82e73b4e9 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 529 2.6E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS05935 504753d31955de5f49bfbff82e73b4e9 537 Gene3D G3DSA:3.30.450.20 158 309 2.5E-5 T 28-03-2018 APY29_RS14365 d1d03320cc9c86e608283970486ba78e 441 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 195 206 - T 28-03-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site APY29_RS14365 d1d03320cc9c86e608283970486ba78e 441 SUPERFAMILY SSF52743 169 432 3.67E-57 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS14365 d1d03320cc9c86e608283970486ba78e 441 PRINTS PR00723 Subtilisin serine protease family (S8) signature 228 241 2.5E-19 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS14365 d1d03320cc9c86e608283970486ba78e 441 PRINTS PR00723 Subtilisin serine protease family (S8) signature 379 395 2.5E-19 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS14365 d1d03320cc9c86e608283970486ba78e 441 PRINTS PR00723 Subtilisin serine protease family (S8) signature 190 209 2.5E-19 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS14365 d1d03320cc9c86e608283970486ba78e 441 Pfam PF00082 Subtilase family 190 327 1.5E-17 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS14365 d1d03320cc9c86e608283970486ba78e 441 Pfam PF00082 Subtilase family 359 417 1.6E-9 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS14365 d1d03320cc9c86e608283970486ba78e 441 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 232 242 - T 28-03-2018 IPR022398 Peptidase S8, subtilisin, His-active site APY29_RS14365 d1d03320cc9c86e608283970486ba78e 441 Gene3D G3DSA:3.40.50.200 125 432 3.5E-57 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS07865 fb1738636adb086279aa36824b48eccf 270 Gene3D G3DSA:3.90.70.10 36 270 5.1E-31 T 28-03-2018 APY29_RS07865 fb1738636adb086279aa36824b48eccf 270 SMART SM00645 53 267 3.0E-6 T 28-03-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 APY29_RS07865 fb1738636adb086279aa36824b48eccf 270 Pfam PF00112 Papain family cysteine protease 54 256 1.8E-15 T 28-03-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 APY29_RS07865 fb1738636adb086279aa36824b48eccf 270 SUPERFAMILY SSF54001 42 258 1.72E-37 T 28-03-2018 APY29_RS11640 008e11188dd3a5a4ca791d362a91406b 670 SUPERFAMILY SSF56712 1 603 4.19E-177 T 28-03-2018 IPR023405 DNA topoisomerase, type IA, core domain APY29_RS11640 008e11188dd3a5a4ca791d362a91406b 670 SMART SM00436 122 217 1.4E-35 T 28-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 APY29_RS11640 008e11188dd3a5a4ca791d362a91406b 670 Pfam PF01751 Toprim domain 3 128 1.7E-16 T 28-03-2018 IPR006171 TOPRIM domain APY29_RS11640 008e11188dd3a5a4ca791d362a91406b 670 Gene3D G3DSA:3.30.65.10 609 661 9.4E-15 T 28-03-2018 APY29_RS11640 008e11188dd3a5a4ca791d362a91406b 670 Gene3D G3DSA:3.40.50.140 1 150 1.8E-40 T 28-03-2018 APY29_RS11640 008e11188dd3a5a4ca791d362a91406b 670 Gene3D G3DSA:1.10.460.10 477 608 3.0E-15 T 28-03-2018 APY29_RS11640 008e11188dd3a5a4ca791d362a91406b 670 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 647 1.9E-219 T 28-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 APY29_RS11640 008e11188dd3a5a4ca791d362a91406b 670 Pfam PF01131 DNA topoisomerase 152 586 8.2E-109 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APY29_RS11640 008e11188dd3a5a4ca791d362a91406b 670 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 2.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APY29_RS11640 008e11188dd3a5a4ca791d362a91406b 670 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 96 109 2.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APY29_RS11640 008e11188dd3a5a4ca791d362a91406b 670 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 2.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APY29_RS11640 008e11188dd3a5a4ca791d362a91406b 670 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 187 205 2.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APY29_RS11640 008e11188dd3a5a4ca791d362a91406b 670 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 518 532 2.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APY29_RS11640 008e11188dd3a5a4ca791d362a91406b 670 SMART SM00493 1 122 4.6E-25 T 28-03-2018 IPR006171 TOPRIM domain APY29_RS11640 008e11188dd3a5a4ca791d362a91406b 670 Gene3D G3DSA:1.10.460.10 151 361 1.0E-39 T 28-03-2018 APY29_RS11640 008e11188dd3a5a4ca791d362a91406b 670 Gene3D G3DSA:2.70.20.10 362 476 1.8E-21 T 28-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APY29_RS11640 008e11188dd3a5a4ca791d362a91406b 670 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 617 651 9.4E-10 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 APY29_RS11640 008e11188dd3a5a4ca791d362a91406b 670 SUPERFAMILY SSF57783 616 651 9.69E-10 T 28-03-2018 APY29_RS11640 008e11188dd3a5a4ca791d362a91406b 670 SMART SM00437 271 555 7.7E-62 T 28-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 APY29_RS11640 008e11188dd3a5a4ca791d362a91406b 670 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 308 323 - T 28-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 APY29_RS14605 46e1876e3a03b2d73b0ea260cd4ebf1d 296 SUPERFAMILY SSF53383 47 294 1.21E-36 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS14605 46e1876e3a03b2d73b0ea260cd4ebf1d 296 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 157 170 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 APY29_RS14605 46e1876e3a03b2d73b0ea260cd4ebf1d 296 Gene3D G3DSA:3.90.1150.10 195 290 3.0E-15 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS14605 46e1876e3a03b2d73b0ea260cd4ebf1d 296 Gene3D G3DSA:3.40.640.10 112 194 9.3E-13 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS14605 46e1876e3a03b2d73b0ea260cd4ebf1d 296 Pfam PF00155 Aminotransferase class I and II 119 290 9.4E-19 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APY29_RS14605 46e1876e3a03b2d73b0ea260cd4ebf1d 296 Gene3D G3DSA:3.40.640.10 50 111 0.0049 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS14170 5590cd6c3281bca32498b75e33fef296 573 SUPERFAMILY SSF90123 19 314 2.22E-21 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS14170 5590cd6c3281bca32498b75e33fef296 573 Pfam PF00005 ABC transporter 367 509 1.0E-18 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS14170 5590cd6c3281bca32498b75e33fef296 573 Gene3D G3DSA:1.20.1560.10 5 374 4.6E-16 T 28-03-2018 APY29_RS14170 5590cd6c3281bca32498b75e33fef296 573 SUPERFAMILY SSF52540 364 552 7.77E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS14170 5590cd6c3281bca32498b75e33fef296 573 Gene3D G3DSA:3.40.50.300 375 569 6.8E-35 T 28-03-2018 APY29_RS14170 5590cd6c3281bca32498b75e33fef296 573 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS14170 5590cd6c3281bca32498b75e33fef296 573 SMART SM00382 369 572 3.8E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS15645 5b1af2517e6f34d8e2573f1410aecd13 241 Gene3D G3DSA:2.60.40.10 146 228 1.8E-4 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS15645 5b1af2517e6f34d8e2573f1410aecd13 241 Gene3D G3DSA:2.60.40.10 30 145 3.8E-16 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS15645 5b1af2517e6f34d8e2573f1410aecd13 241 SUPERFAMILY SSF49354 26 143 2.3E-15 T 28-03-2018 IPR008962 PapD-like APY29_RS15645 5b1af2517e6f34d8e2573f1410aecd13 241 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 31 122 2.0E-8 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 APY29_RS08680 02f845bfc2793bc995d2036d6da285c7 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 28-03-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 APY29_RS08680 02f845bfc2793bc995d2036d6da285c7 268 Gene3D G3DSA:3.20.20.70 2 268 3.3E-80 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS08680 02f845bfc2793bc995d2036d6da285c7 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 264 34.209 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 APY29_RS08680 02f845bfc2793bc995d2036d6da285c7 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 254 1.5E-70 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 APY29_RS08680 02f845bfc2793bc995d2036d6da285c7 268 Pfam PF00290 Tryptophan synthase alpha chain 8 257 6.3E-83 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 APY29_RS08680 02f845bfc2793bc995d2036d6da285c7 268 SUPERFAMILY SSF51366 1 243 6.31E-84 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APY29_RS18430 ebaed7484466be4b6f9d47635a4c826f 76 Pfam PF09413 Putative prokaryotic signal transducing protein 1 66 1.7E-12 T 28-03-2018 IPR018551 Domain of unknown function DUF2007 APY29_RS18430 ebaed7484466be4b6f9d47635a4c826f 76 Gene3D G3DSA:3.30.70.790 1 73 8.4E-17 T 28-03-2018 APY29_RS08725 a07974b95b48f54a20d5d21d602a588b 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 239 3.0E-66 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS08725 a07974b95b48f54a20d5d21d602a588b 251 Pfam PF00121 Triosephosphate isomerase 4 244 6.9E-88 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS08725 a07974b95b48f54a20d5d21d602a588b 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 40.907 T 28-03-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS08725 a07974b95b48f54a20d5d21d602a588b 251 Gene3D G3DSA:3.20.20.70 1 251 2.3E-95 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS08725 a07974b95b48f54a20d5d21d602a588b 251 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 28-03-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS08725 a07974b95b48f54a20d5d21d602a588b 251 SUPERFAMILY SSF51351 1 247 6.94E-88 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS17845 48a1fdcf344f25785e42bc5369f233db 340 Pfam PF13602 Zinc-binding dehydrogenase 195 337 5.1E-20 T 28-03-2018 APY29_RS17845 48a1fdcf344f25785e42bc5369f233db 340 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 340 7.9E-136 T 28-03-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 APY29_RS17845 48a1fdcf344f25785e42bc5369f233db 340 SUPERFAMILY SSF50129 9 140 6.39E-31 T 28-03-2018 IPR011032 GroES-like APY29_RS17845 48a1fdcf344f25785e42bc5369f233db 340 Gene3D G3DSA:3.90.180.10 1 159 2.3E-40 T 28-03-2018 APY29_RS17845 48a1fdcf344f25785e42bc5369f233db 340 Gene3D G3DSA:3.40.50.720 160 265 7.5E-21 T 28-03-2018 APY29_RS17845 48a1fdcf344f25785e42bc5369f233db 340 SUPERFAMILY SSF51735 118 289 2.84E-35 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS17845 48a1fdcf344f25785e42bc5369f233db 340 Gene3D G3DSA:3.90.180.10 268 338 0.054 T 28-03-2018 APY29_RS17845 48a1fdcf344f25785e42bc5369f233db 340 SMART SM00829 16 337 8.1E-12 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APY29_RS17845 48a1fdcf344f25785e42bc5369f233db 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 90 1.7E-8 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APY29_RS15535 69698eeda8f3ef375bed9cd0930e8ad8 397 Gene3D G3DSA:1.10.287.470 138 180 1.1E-8 T 28-03-2018 APY29_RS15535 69698eeda8f3ef375bed9cd0930e8ad8 397 SUPERFAMILY SSF111369 59 113 9.94E-9 T 28-03-2018 APY29_RS15535 69698eeda8f3ef375bed9cd0930e8ad8 397 Gene3D G3DSA:2.40.50.100 209 382 6.6E-8 T 28-03-2018 APY29_RS15535 69698eeda8f3ef375bed9cd0930e8ad8 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 289 2.6E-15 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APY29_RS15535 69698eeda8f3ef375bed9cd0930e8ad8 397 Pfam PF00529 HlyD membrane-fusion protein of T1SS 36 344 1.6E-9 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 APY29_RS15535 69698eeda8f3ef375bed9cd0930e8ad8 397 Gene3D G3DSA:2.40.50.100 59 137 8.8E-13 T 28-03-2018 APY29_RS15535 69698eeda8f3ef375bed9cd0930e8ad8 397 SUPERFAMILY SSF111369 164 267 8.76E-11 T 28-03-2018 APY29_RS19715 6a099acdb27b6bc0ab76f3b274887716 656 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 430 445 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APY29_RS19715 6a099acdb27b6bc0ab76f3b274887716 656 SUPERFAMILY SSF46689 553 653 3.88E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS19715 6a099acdb27b6bc0ab76f3b274887716 656 Pfam PF00158 Sigma-54 interaction domain 344 510 3.6E-59 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APY29_RS19715 6a099acdb27b6bc0ab76f3b274887716 656 SUPERFAMILY SSF52540 343 583 1.11E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS19715 6a099acdb27b6bc0ab76f3b274887716 656 SUPERFAMILY SSF55781 81 214 2.63E-5 T 28-03-2018 IPR029016 GAF domain-like APY29_RS19715 6a099acdb27b6bc0ab76f3b274887716 656 SMART SM00382 363 507 1.1E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS19715 6a099acdb27b6bc0ab76f3b274887716 656 Gene3D G3DSA:3.30.450.20 233 350 0.0044 T 28-03-2018 APY29_RS19715 6a099acdb27b6bc0ab76f3b274887716 656 Gene3D G3DSA:3.30.450.40 25 226 7.0E-8 T 28-03-2018 IPR029016 GAF domain-like APY29_RS19715 6a099acdb27b6bc0ab76f3b274887716 656 Gene3D G3DSA:1.10.10.60 582 656 3.2E-18 T 28-03-2018 APY29_RS19715 6a099acdb27b6bc0ab76f3b274887716 656 Gene3D G3DSA:3.40.50.300 351 515 5.8E-20 T 28-03-2018 APY29_RS19715 6a099acdb27b6bc0ab76f3b274887716 656 Pfam PF02954 Bacterial regulatory protein, Fis family 611 651 3.4E-15 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS19715 6a099acdb27b6bc0ab76f3b274887716 656 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 634 654 1.0E-9 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS19715 6a099acdb27b6bc0ab76f3b274887716 656 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 617 634 1.0E-9 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS19715 6a099acdb27b6bc0ab76f3b274887716 656 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 553 562 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site APY29_RS19715 6a099acdb27b6bc0ab76f3b274887716 656 Pfam PF01590 GAF domain 92 215 1.7E-6 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS19715 6a099acdb27b6bc0ab76f3b274887716 656 Gene3D G3DSA:1.10.8.60 517 581 1.7E-17 T 28-03-2018 APY29_RS22615 05a129f405afee9d5d68b2f4abd859d0 564 Pfam PF04616 Glycosyl hydrolases family 43 52 344 1.0E-96 T 28-03-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APY29_RS22615 05a129f405afee9d5d68b2f4abd859d0 564 SUPERFAMILY SSF75005 52 352 2.43E-86 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APY29_RS22615 05a129f405afee9d5d68b2f4abd859d0 564 Gene3D G3DSA:2.60.120.200 375 563 7.6E-38 T 28-03-2018 APY29_RS22615 05a129f405afee9d5d68b2f4abd859d0 564 SUPERFAMILY SSF49899 375 559 3.21E-44 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain APY29_RS22615 05a129f405afee9d5d68b2f4abd859d0 564 Gene3D G3DSA:2.115.10.20 50 357 7.2E-69 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APY29_RS18415 c3c77c7d858d012d6d1e703ca2ea9f94 235 Gene3D G3DSA:3.30.450.40 18 84 0.007 T 28-03-2018 IPR029016 GAF domain-like APY29_RS18415 c3c77c7d858d012d6d1e703ca2ea9f94 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 188 1.5E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS18415 c3c77c7d858d012d6d1e703ca2ea9f94 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 204 1.5E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS18415 c3c77c7d858d012d6d1e703ca2ea9f94 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 204 216 1.5E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS18415 c3c77c7d858d012d6d1e703ca2ea9f94 235 Pfam PF00196 Bacterial regulatory proteins, luxR family 174 228 2.6E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS18415 c3c77c7d858d012d6d1e703ca2ea9f94 235 Gene3D G3DSA:3.30.450.40 85 143 0.003 T 28-03-2018 IPR029016 GAF domain-like APY29_RS18415 c3c77c7d858d012d6d1e703ca2ea9f94 235 SUPERFAMILY SSF46894 163 233 6.12E-20 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS18415 c3c77c7d858d012d6d1e703ca2ea9f94 235 Gene3D G3DSA:1.10.10.10 144 233 4.8E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS18415 c3c77c7d858d012d6d1e703ca2ea9f94 235 SUPERFAMILY SSF55781 22 147 4.36E-6 T 28-03-2018 IPR029016 GAF domain-like APY29_RS18415 c3c77c7d858d012d6d1e703ca2ea9f94 235 SMART SM00421 171 228 5.6E-23 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS01250 6eb8ff3110a7e4938aa777bedaf2173b 523 Gene3D G3DSA:3.60.21.10 135 516 2.9E-30 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like APY29_RS01250 6eb8ff3110a7e4938aa777bedaf2173b 523 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 44 129 5.9E-19 T 28-03-2018 IPR032093 Phospholipase D, N-terminal APY29_RS01250 6eb8ff3110a7e4938aa777bedaf2173b 523 Pfam PF09423 PhoD-like phosphatase 159 502 4.5E-80 T 28-03-2018 IPR018946 Alkaline phosphatase D-related APY29_RS01250 6eb8ff3110a7e4938aa777bedaf2173b 523 SUPERFAMILY SSF56300 138 515 6.2E-42 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like APY29_RS13350 381427415170f8f6b503d29c36f0852c 239 Gene3D G3DSA:2.40.33.20 4 239 2.4E-53 T 28-03-2018 APY29_RS13350 381427415170f8f6b503d29c36f0852c 239 SUPERFAMILY SSF50800 12 236 4.87E-74 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain APY29_RS13350 381427415170f8f6b503d29c36f0852c 239 Pfam PF03475 3-alpha domain 183 223 5.7E-10 T 28-03-2018 IPR005163 3-alpha domain APY29_RS13350 381427415170f8f6b503d29c36f0852c 239 Pfam PF03473 MOSC domain 59 172 1.0E-26 T 28-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 APY29_RS20535 1e43cba371c9ec12cb0356f623906115 527 Pfam PF01808 AICARFT/IMPCHase bienzyme 138 457 2.4E-112 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APY29_RS20535 1e43cba371c9ec12cb0356f623906115 527 SMART SM00851 20 133 9.0E-50 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain APY29_RS20535 1e43cba371c9ec12cb0356f623906115 527 Gene3D G3DSA:3.40.50.1380 1 197 2.4E-67 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain APY29_RS20535 1e43cba371c9ec12cb0356f623906115 527 Gene3D G3DSA:3.40.140.20 374 517 8.1E-51 T 28-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APY29_RS20535 1e43cba371c9ec12cb0356f623906115 527 Pfam PF02142 MGS-like domain 20 132 2.1E-24 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain APY29_RS20535 1e43cba371c9ec12cb0356f623906115 527 SUPERFAMILY SSF53927 220 527 3.71E-126 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 APY29_RS20535 1e43cba371c9ec12cb0356f623906115 527 Gene3D G3DSA:3.40.140.20 246 373 2.0E-50 T 28-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APY29_RS20535 1e43cba371c9ec12cb0356f623906115 527 PIRSF PIRSF000414 2 527 2.0E-211 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APY29_RS20535 1e43cba371c9ec12cb0356f623906115 527 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 8 527 44.523 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APY29_RS20535 1e43cba371c9ec12cb0356f623906115 527 SUPERFAMILY SSF52335 8 197 1.96E-63 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain APY29_RS20535 1e43cba371c9ec12cb0356f623906115 527 SMART SM00798 138 459 1.2E-189 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APY29_RS20535 1e43cba371c9ec12cb0356f623906115 527 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 9 527 1.2E-217 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APY29_RS07415 c26c8ae8257bf3fbe5cda886d6cee017 221 SUPERFAMILY SSF47473 39 169 2.64E-20 T 28-03-2018 IPR011992 EF-hand domain pair APY29_RS07415 c26c8ae8257bf3fbe5cda886d6cee017 221 ProSitePatterns PS00018 EF-hand calcium-binding domain. 47 59 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site APY29_RS07415 c26c8ae8257bf3fbe5cda886d6cee017 221 ProSitePatterns PS00018 EF-hand calcium-binding domain. 83 95 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site APY29_RS07415 c26c8ae8257bf3fbe5cda886d6cee017 221 Gene3D G3DSA:1.10.238.10 54 90 8.0E-10 T 28-03-2018 APY29_RS07415 c26c8ae8257bf3fbe5cda886d6cee017 221 Pfam PF13202 EF hand 148 166 0.016 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 APY29_RS07415 c26c8ae8257bf3fbe5cda886d6cee017 221 Gene3D G3DSA:1.10.238.10 134 158 0.002 T 28-03-2018 APY29_RS07415 c26c8ae8257bf3fbe5cda886d6cee017 221 Pfam PF13499 EF-hand domain pair 39 98 4.9E-7 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 APY29_RS07415 c26c8ae8257bf3fbe5cda886d6cee017 221 Gene3D G3DSA:1.10.1330.10 91 133 6.0E-4 T 28-03-2018 APY29_RS07415 c26c8ae8257bf3fbe5cda886d6cee017 221 SMART SM00054 38 66 5.3 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 APY29_RS07415 c26c8ae8257bf3fbe5cda886d6cee017 221 SMART SM00054 112 140 10.0 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 APY29_RS07415 c26c8ae8257bf3fbe5cda886d6cee017 221 SMART SM00054 74 102 5.7 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 APY29_RS07415 c26c8ae8257bf3fbe5cda886d6cee017 221 SMART SM00054 143 171 7.4 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 APY29_RS07415 c26c8ae8257bf3fbe5cda886d6cee017 221 ProSitePatterns PS00018 EF-hand calcium-binding domain. 152 164 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site APY29_RS07415 c26c8ae8257bf3fbe5cda886d6cee017 221 Gene3D G3DSA:1.10.238.10 25 53 0.41 T 28-03-2018 APY29_RS07415 c26c8ae8257bf3fbe5cda886d6cee017 221 Gene3D G3DSA:1.10.238.10 159 208 0.052 T 28-03-2018 APY29_RS00930 c5aa10e3930e4cb61674a3aaf589b724 340 Pfam PF00437 Type II/IV secretion system protein 13 321 5.8E-64 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APY29_RS00930 c5aa10e3930e4cb61674a3aaf589b724 340 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 17 337 2.6E-89 T 28-03-2018 IPR014155 Type IV secretion system protein VirB11 GO:0005737|GO:0006810|GO:0009405 APY29_RS00930 c5aa10e3930e4cb61674a3aaf589b724 340 SUPERFAMILY SSF52540 5 328 1.47E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS00930 c5aa10e3930e4cb61674a3aaf589b724 340 Gene3D G3DSA:3.40.50.300 165 339 2.3E-12 T 28-03-2018 APY29_RS00930 c5aa10e3930e4cb61674a3aaf589b724 340 Gene3D G3DSA:3.30.450.90 6 127 1.3E-19 T 28-03-2018 APY29_RS06185 8d606fc13063fbb90e82f0f00409ce91 713 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 68 713 4.5E-78 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APY29_RS06185 8d606fc13063fbb90e82f0f00409ce91 713 Gene3D G3DSA:2.40.170.20 195 713 2.0E-65 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS06185 8d606fc13063fbb90e82f0f00409ce91 713 SUPERFAMILY SSF56935 46 713 1.6E-105 T 28-03-2018 APY29_RS06185 8d606fc13063fbb90e82f0f00409ce91 713 Pfam PF00593 TonB dependent receptor 263 712 4.6E-40 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS06185 8d606fc13063fbb90e82f0f00409ce91 713 Gene3D G3DSA:2.170.130.10 63 185 2.0E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS06185 8d606fc13063fbb90e82f0f00409ce91 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 176 1.2E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS00250 f974de1d4eaf8381ae62f551cb9e26d1 126 Pfam PF11720 Peptidase inhibitor I78 family 62 126 8.2E-24 T 28-03-2018 IPR021719 Proteinase inhibitor I78 APY29_RS00250 f974de1d4eaf8381ae62f551cb9e26d1 126 Gene3D G3DSA:3.30.10.10 65 124 5.0E-6 T 28-03-2018 APY29_RS14290 3469162d8308e39812ed36b2a265e950 299 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 188 200 1.6E-7 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APY29_RS14290 3469162d8308e39812ed36b2a265e950 299 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 34 48 1.6E-7 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APY29_RS14290 3469162d8308e39812ed36b2a265e950 299 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 9 25 1.6E-7 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APY29_RS14290 3469162d8308e39812ed36b2a265e950 299 Gene3D G3DSA:3.40.50.150 2 276 6.9E-30 T 28-03-2018 APY29_RS14290 3469162d8308e39812ed36b2a265e950 299 PIRSF PIRSF000398 1 274 5.9E-45 T 28-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 APY29_RS14290 3469162d8308e39812ed36b2a265e950 299 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 9 246 2.3E-15 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APY29_RS14290 3469162d8308e39812ed36b2a265e950 299 SUPERFAMILY SSF53335 5 257 1.97E-42 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS07530 0f432f70f95ff08cbd2b2af9af7492a2 284 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 175 278 5.7E-34 T 28-03-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 APY29_RS07530 0f432f70f95ff08cbd2b2af9af7492a2 284 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 234 257 - T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 APY29_RS07530 0f432f70f95ff08cbd2b2af9af7492a2 284 SUPERFAMILY SSF48179 174 280 2.04E-33 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APY29_RS07530 0f432f70f95ff08cbd2b2af9af7492a2 284 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 17 111 2.0E-16 T 28-03-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal APY29_RS07530 0f432f70f95ff08cbd2b2af9af7492a2 284 SUPERFAMILY SSF51735 17 172 3.23E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS07530 0f432f70f95ff08cbd2b2af9af7492a2 284 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 17 279 2.3E-83 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 APY29_RS07530 0f432f70f95ff08cbd2b2af9af7492a2 284 Gene3D G3DSA:3.40.50.720 12 176 1.8E-26 T 28-03-2018 APY29_RS07530 0f432f70f95ff08cbd2b2af9af7492a2 284 PIRSF PIRSF000193 14 282 1.0E-68 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 APY29_RS07530 0f432f70f95ff08cbd2b2af9af7492a2 284 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 15 279 26.161 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 APY29_RS07530 0f432f70f95ff08cbd2b2af9af7492a2 284 Gene3D G3DSA:1.10.3730.10 177 284 6.0E-38 T 28-03-2018 APY29_RS18810 6eb9f8a00710a0e9f6a77cec690b6c47 743 Pfam PF00593 TonB dependent receptor 294 741 6.8E-58 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS18810 6eb9f8a00710a0e9f6a77cec690b6c47 743 Gene3D G3DSA:2.170.130.10 32 176 3.8E-33 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS18810 6eb9f8a00710a0e9f6a77cec690b6c47 743 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 41 743 5.1E-108 T 28-03-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 APY29_RS18810 6eb9f8a00710a0e9f6a77cec690b6c47 743 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 41 743 1.2E-123 T 28-03-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 APY29_RS18810 6eb9f8a00710a0e9f6a77cec690b6c47 743 Gene3D G3DSA:2.40.170.20 177 742 1.1E-68 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS18810 6eb9f8a00710a0e9f6a77cec690b6c47 743 SUPERFAMILY SSF56935 37 743 9.16E-114 T 28-03-2018 APY29_RS18810 6eb9f8a00710a0e9f6a77cec690b6c47 743 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 165 1.2E-27 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS05770 62778c3e52bd6b77e16daf0377e30aed 594 SUPERFAMILY SSF103515 323 563 1.26E-33 T 28-03-2018 IPR005546 Autotransporter beta-domain APY29_RS05770 62778c3e52bd6b77e16daf0377e30aed 594 SMART SM00869 327 584 1.5E-33 T 28-03-2018 IPR005546 Autotransporter beta-domain APY29_RS05770 62778c3e52bd6b77e16daf0377e30aed 594 PIRSF PIRSF037375 1 594 1.7E-202 T 28-03-2018 IPR017186 Lipase, autotransporter EstA APY29_RS05770 62778c3e52bd6b77e16daf0377e30aed 594 Gene3D G3DSA:2.40.128.130 287 572 2.3E-32 T 28-03-2018 APY29_RS05770 62778c3e52bd6b77e16daf0377e30aed 594 SUPERFAMILY SSF52266 22 228 1.83E-15 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain APY29_RS05770 62778c3e52bd6b77e16daf0377e30aed 594 SUPERFAMILY SSF52266 257 292 1.83E-15 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain APY29_RS05770 62778c3e52bd6b77e16daf0377e30aed 594 Gene3D G3DSA:3.40.50.1110 5 286 8.3E-59 T 28-03-2018 APY29_RS05770 62778c3e52bd6b77e16daf0377e30aed 594 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 22 286 2.2E-9 T 28-03-2018 IPR001087 GDSL lipase/esterase GO:0016788 APY29_RS05770 62778c3e52bd6b77e16daf0377e30aed 594 Pfam PF03797 Autotransporter beta-domain 331 561 5.1E-41 T 28-03-2018 IPR005546 Autotransporter beta-domain APY29_RS09095 f331f616e6982dfca9e438778668f404 376 Gene3D G3DSA:1.10.10.10 3 23 0.037 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS09095 f331f616e6982dfca9e438778668f404 376 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 54 2.5E-14 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS09095 f331f616e6982dfca9e438778668f404 376 SUPERFAMILY SSF53822 83 335 7.46E-54 T 28-03-2018 IPR028082 Periplasmic binding protein-like I APY29_RS09095 f331f616e6982dfca9e438778668f404 376 Gene3D G3DSA:3.40.50.2300 184 346 1.6E-44 T 28-03-2018 APY29_RS09095 f331f616e6982dfca9e438778668f404 376 Gene3D G3DSA:3.40.50.2300 66 183 1.3E-19 T 28-03-2018 APY29_RS09095 f331f616e6982dfca9e438778668f404 376 Pfam PF13377 Periplasmic binding protein-like domain 183 343 3.9E-36 T 28-03-2018 APY29_RS09095 f331f616e6982dfca9e438778668f404 376 SMART SM00354 9 79 3.7E-13 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS09095 f331f616e6982dfca9e438778668f404 376 SUPERFAMILY SSF47413 9 65 1.99E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APY29_RS09095 f331f616e6982dfca9e438778668f404 376 Gene3D G3DSA:1.10.260.40 24 65 6.8E-19 T 28-03-2018 APY29_RS08535 cf6fe36ddfe9500f025a6b583bbd2b42 851 PRINTS PR00723 Subtilisin serine protease family (S8) signature 558 574 2.5E-7 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS08535 cf6fe36ddfe9500f025a6b583bbd2b42 851 PRINTS PR00723 Subtilisin serine protease family (S8) signature 272 291 2.5E-7 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS08535 cf6fe36ddfe9500f025a6b583bbd2b42 851 PRINTS PR00723 Subtilisin serine protease family (S8) signature 317 330 2.5E-7 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS08535 cf6fe36ddfe9500f025a6b583bbd2b42 851 Pfam PF00082 Subtilase family 275 596 4.4E-22 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS08535 cf6fe36ddfe9500f025a6b583bbd2b42 851 Gene3D G3DSA:3.40.50.200 266 655 2.4E-26 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS08535 cf6fe36ddfe9500f025a6b583bbd2b42 851 SUPERFAMILY SSF52743 456 597 2.88E-32 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS08535 cf6fe36ddfe9500f025a6b583bbd2b42 851 SUPERFAMILY SSF52743 270 428 2.88E-32 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS08535 cf6fe36ddfe9500f025a6b583bbd2b42 851 SUPERFAMILY SSF52743 625 649 2.88E-32 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS16955 f3dab451a741d85ba48bfab481d5ea17 241 SUPERFAMILY SSF46689 129 177 2.06E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS16955 f3dab451a741d85ba48bfab481d5ea17 241 SUPERFAMILY SSF46689 182 229 8.51E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS16955 f3dab451a741d85ba48bfab481d5ea17 241 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 183 224 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APY29_RS16955 f3dab451a741d85ba48bfab481d5ea17 241 Pfam PF08448 PAS fold 13 119 2.5E-22 T 28-03-2018 IPR013656 PAS fold-4 APY29_RS16955 f3dab451a741d85ba48bfab481d5ea17 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 212 228 2.3E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APY29_RS16955 f3dab451a741d85ba48bfab481d5ea17 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 197 212 2.3E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APY29_RS16955 f3dab451a741d85ba48bfab481d5ea17 241 Gene3D G3DSA:1.10.10.60 141 185 1.0E-10 T 28-03-2018 APY29_RS16955 f3dab451a741d85ba48bfab481d5ea17 241 Gene3D G3DSA:3.30.450.20 5 140 3.7E-15 T 28-03-2018 APY29_RS16955 f3dab451a741d85ba48bfab481d5ea17 241 Pfam PF12833 Helix-turn-helix domain 153 229 8.0E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS16955 f3dab451a741d85ba48bfab481d5ea17 241 SMART SM00091 7 75 1.1E-4 T 28-03-2018 IPR000014 PAS domain APY29_RS16955 f3dab451a741d85ba48bfab481d5ea17 241 Gene3D G3DSA:1.10.10.60 186 241 3.4E-15 T 28-03-2018 APY29_RS16955 f3dab451a741d85ba48bfab481d5ea17 241 SMART SM00342 146 228 1.5E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS16955 f3dab451a741d85ba48bfab481d5ea17 241 SUPERFAMILY SSF55785 9 118 4.36E-15 T 28-03-2018 IPR000014 PAS domain APY29_RS00245 44e891e73fe398d27481ea9dd49467c9 1490 Gene3D G3DSA:3.20.20.70 449 790 3.5E-80 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS00245 44e891e73fe398d27481ea9dd49467c9 1490 Pfam PF00310 Glutamine amidotransferases class-II 25 437 9.0E-153 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain APY29_RS00245 44e891e73fe398d27481ea9dd49467c9 1490 Gene3D G3DSA:3.60.20.10 25 448 1.5E-119 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APY29_RS00245 44e891e73fe398d27481ea9dd49467c9 1490 SUPERFAMILY SSF51395 457 1205 5.5E-247 T 28-03-2018 APY29_RS00245 44e891e73fe398d27481ea9dd49467c9 1490 Gene3D G3DSA:2.160.20.60 1221 1488 2.2E-90 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 APY29_RS00245 44e891e73fe398d27481ea9dd49467c9 1490 Gene3D G3DSA:3.20.20.70 791 1219 2.6E-142 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS00245 44e891e73fe398d27481ea9dd49467c9 1490 Pfam PF01493 GXGXG motif 1247 1430 1.5E-75 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 APY29_RS00245 44e891e73fe398d27481ea9dd49467c9 1490 SUPERFAMILY SSF69336 1221 1476 3.27E-86 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 APY29_RS00245 44e891e73fe398d27481ea9dd49467c9 1490 Pfam PF04898 Glutamate synthase central domain 468 750 1.8E-98 T 28-03-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 APY29_RS00245 44e891e73fe398d27481ea9dd49467c9 1490 Pfam PF01645 Conserved region in glutamate synthase 806 1169 7.5E-147 T 28-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 APY29_RS00245 44e891e73fe398d27481ea9dd49467c9 1490 SUPERFAMILY SSF56235 25 440 2.14E-128 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APY29_RS14890 8bae5f307b9c4bf4e3814d7ce8514c3c 357 Pfam PF12849 PBP superfamily domain 41 325 4.6E-61 T 28-03-2018 IPR024370 PBP domain APY29_RS14890 8bae5f307b9c4bf4e3814d7ce8514c3c 357 Gene3D G3DSA:3.40.190.10 174 356 8.1E-26 T 28-03-2018 APY29_RS14890 8bae5f307b9c4bf4e3814d7ce8514c3c 357 SUPERFAMILY SSF53850 45 353 1.38E-96 T 28-03-2018 APY29_RS14890 8bae5f307b9c4bf4e3814d7ce8514c3c 357 Gene3D G3DSA:3.40.190.10 42 173 1.6E-32 T 28-03-2018 APY29_RS14890 8bae5f307b9c4bf4e3814d7ce8514c3c 357 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 45 353 2.4E-126 T 28-03-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 APY29_RS14890 8bae5f307b9c4bf4e3814d7ce8514c3c 357 PIRSF PIRSF002756 8 355 8.9E-109 T 28-03-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 APY29_RS02555 dbe9fe75cba0ae32572a345e75c67a5b 321 SUPERFAMILY SSF51735 1 316 1.38E-92 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS02555 dbe9fe75cba0ae32572a345e75c67a5b 321 Gene3D G3DSA:3.40.50.720 1 189 6.4E-42 T 28-03-2018 APY29_RS02555 dbe9fe75cba0ae32572a345e75c67a5b 321 Gene3D G3DSA:3.90.25.10 190 319 1.1E-31 T 28-03-2018 APY29_RS02555 dbe9fe75cba0ae32572a345e75c67a5b 321 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 246 5.8E-60 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 APY29_RS02555 dbe9fe75cba0ae32572a345e75c67a5b 321 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 9.7E-24 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 APY29_RS02555 dbe9fe75cba0ae32572a345e75c67a5b 321 PRINTS PR01713 Nucleotide sugar epimerase signature 279 296 9.7E-24 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 APY29_RS02555 dbe9fe75cba0ae32572a345e75c67a5b 321 PRINTS PR01713 Nucleotide sugar epimerase signature 214 229 9.7E-24 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 APY29_RS02555 dbe9fe75cba0ae32572a345e75c67a5b 321 PRINTS PR01713 Nucleotide sugar epimerase signature 240 255 9.7E-24 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 APY29_RS18450 e94215e9f888cf0c825da6af76b190d0 309 SUPERFAMILY SSF103481 47 143 3.27E-5 T 28-03-2018 APY29_RS18450 e94215e9f888cf0c825da6af76b190d0 309 SUPERFAMILY SSF103481 208 301 1.31E-6 T 28-03-2018 APY29_RS22440 f049cd35acdd8303ed27b2024a514246 540 SUPERFAMILY SSF53474 45 513 1.39E-99 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS22440 f049cd35acdd8303ed27b2024a514246 540 Gene3D G3DSA:3.40.50.1820 21 531 2.9E-108 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS22440 f049cd35acdd8303ed27b2024a514246 540 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 112 122 - T 28-03-2018 IPR019819 Carboxylesterase type B, conserved site APY29_RS22440 f049cd35acdd8303ed27b2024a514246 540 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 212 227 - T 28-03-2018 IPR019826 Carboxylesterase type B, active site APY29_RS22440 f049cd35acdd8303ed27b2024a514246 540 Pfam PF00135 Carboxylesterase family 46 515 5.2E-86 T 28-03-2018 IPR002018 Carboxylesterase, type B APY29_RS22530 b3e1315f8494033069897958fc426bd6 245 Pfam PF00902 Sec-independent protein translocase protein (TatC) 15 225 3.5E-65 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APY29_RS22530 b3e1315f8494033069897958fc426bd6 245 ProSitePatterns PS01218 TatC family signature. 158 177 - T 28-03-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site APY29_RS22530 b3e1315f8494033069897958fc426bd6 245 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 13 230 1.3E-66 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APY29_RS22530 b3e1315f8494033069897958fc426bd6 245 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 12 39 1.9E-44 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APY29_RS22530 b3e1315f8494033069897958fc426bd6 245 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 89 107 1.9E-44 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APY29_RS22530 b3e1315f8494033069897958fc426bd6 245 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 107 133 1.9E-44 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APY29_RS22530 b3e1315f8494033069897958fc426bd6 245 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 158 186 1.9E-44 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APY29_RS22530 b3e1315f8494033069897958fc426bd6 245 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 9 244 18.251 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APY29_RS04680 35f60b5d75e7822dbb91a61cec797f17 186 Gene3D G3DSA:1.20.58.320 4 85 3.4E-22 T 28-03-2018 APY29_RS04680 35f60b5d75e7822dbb91a61cec797f17 186 Pfam PF06041 Bacterial protein of unknown function (DUF924) 17 183 6.7E-55 T 28-03-2018 IPR010323 Protein of unknown function DUF924 APY29_RS04680 35f60b5d75e7822dbb91a61cec797f17 186 SUPERFAMILY SSF48452 10 182 4.93E-59 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS04680 35f60b5d75e7822dbb91a61cec797f17 186 Gene3D G3DSA:1.25.40.10 86 185 1.3E-34 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS21330 03d49487fea3280bf97bc48bd3b499cd 499 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 APY29_RS21330 03d49487fea3280bf97bc48bd3b499cd 499 PIRSF PIRSF000538 3 498 2.8E-181 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 APY29_RS21330 03d49487fea3280bf97bc48bd3b499cd 499 SUPERFAMILY SSF53067 255 494 2.78E-84 T 28-03-2018 APY29_RS21330 03d49487fea3280bf97bc48bd3b499cd 499 Hamap MF_00186 Glycerol kinase [glpK]. 3 497 59.537 T 28-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 APY29_RS21330 03d49487fea3280bf97bc48bd3b499cd 499 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 450 3.5E-62 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APY29_RS21330 03d49487fea3280bf97bc48bd3b499cd 499 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 252 5.3E-89 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APY29_RS21330 03d49487fea3280bf97bc48bd3b499cd 499 Gene3D G3DSA:3.30.420.40 1 248 5.0E-92 T 28-03-2018 APY29_RS21330 03d49487fea3280bf97bc48bd3b499cd 499 Gene3D G3DSA:3.30.420.40 249 499 1.4E-77 T 28-03-2018 APY29_RS21330 03d49487fea3280bf97bc48bd3b499cd 499 SUPERFAMILY SSF53067 5 255 2.59E-98 T 28-03-2018 APY29_RS21330 03d49487fea3280bf97bc48bd3b499cd 499 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 362 382 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 APY29_RS21330 03d49487fea3280bf97bc48bd3b499cd 499 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 495 7.2E-225 T 28-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 APY29_RS09530 b67058218d7f388a8f07ba8b4953f001 372 SUPERFAMILY SSF50956 57 367 5.89E-35 T 28-03-2018 APY29_RS09530 b67058218d7f388a8f07ba8b4953f001 372 Pfam PF02333 Phytase 229 346 1.4E-5 T 28-03-2018 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 APY29_RS09530 b67058218d7f388a8f07ba8b4953f001 372 Gene3D G3DSA:2.120.10.30 42 371 1.3E-14 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS09735 08cf811f563009b61a6204e1915dc60f 782 SUPERFAMILY SSF50692 645 767 1.97E-17 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain APY29_RS09735 08cf811f563009b61a6204e1915dc60f 782 Pfam PF01568 Molydopterin dinucleotide binding domain 650 757 3.5E-10 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APY29_RS09735 08cf811f563009b61a6204e1915dc60f 782 Pfam PF00384 Molybdopterin oxidoreductase 109 494 6.3E-26 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS09735 08cf811f563009b61a6204e1915dc60f 782 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 13 762 2.1E-287 T 28-03-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 APY29_RS09735 08cf811f563009b61a6204e1915dc60f 782 Gene3D G3DSA:3.40.50.740 325 618 3.7E-44 T 28-03-2018 APY29_RS09735 08cf811f563009b61a6204e1915dc60f 782 PIRSF PIRSF000144 1 768 0.0 T 28-03-2018 APY29_RS09735 08cf811f563009b61a6204e1915dc60f 782 SUPERFAMILY SSF53706 48 632 4.19E-143 T 28-03-2018 APY29_RS09735 08cf811f563009b61a6204e1915dc60f 782 Gene3D G3DSA:3.40.50.740 110 259 1.2E-36 T 28-03-2018 APY29_RS09735 08cf811f563009b61a6204e1915dc60f 782 Gene3D G3DSA:2.40.40.20 637 773 1.7E-22 T 28-03-2018 APY29_RS10310 2268c2c1d786f6ac73b92f005f4af668 95 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 79 1.6E-26 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor APY29_RS10310 2268c2c1d786f6ac73b92f005f4af668 95 SMART SM01234 8 75 1.1E-40 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor APY29_RS10310 2268c2c1d786f6ac73b92f005f4af668 95 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.485 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor APY29_RS10310 2268c2c1d786f6ac73b92f005f4af668 95 Pfam PF01809 Haemolytic domain 10 75 1.7E-27 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor APY29_RS10310 2268c2c1d786f6ac73b92f005f4af668 95 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 22 75 5.0E-25 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor APY29_RS00105 7055acb66c91645470516cebc78001ef 159 Gene3D G3DSA:3.40.140.10 34 159 2.4E-45 T 28-03-2018 APY29_RS00105 7055acb66c91645470516cebc78001ef 159 SUPERFAMILY SSF102712 53 125 5.75E-7 T 28-03-2018 APY29_RS00105 7055acb66c91645470516cebc78001ef 159 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 108 113 - T 28-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site APY29_RS00105 7055acb66c91645470516cebc78001ef 159 TIGRFAM TIGR00608 radc: DNA repair protein RadC 24 158 1.0E-42 T 28-03-2018 IPR001405 RadC protein APY29_RS00105 7055acb66c91645470516cebc78001ef 159 Pfam PF04002 RadC-like JAB domain 38 157 5.4E-43 T 28-03-2018 IPR025657 RadC-like JAB domain APY29_RS15955 a7f149300d221320fbbe9e4acf02bdc0 111 Pfam PF03831 PhnA domain 43 111 2.6E-30 T 28-03-2018 IPR013988 PhnA protein, C-terminal APY29_RS15955 a7f149300d221320fbbe9e4acf02bdc0 111 SUPERFAMILY SSF82057 40 111 2.79E-24 T 28-03-2018 APY29_RS15955 a7f149300d221320fbbe9e4acf02bdc0 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 111 7.7E-32 T 28-03-2018 IPR004624 PhnA protein APY29_RS15955 a7f149300d221320fbbe9e4acf02bdc0 111 Pfam PF08274 PhnA Zinc-Ribbon 4 32 1.3E-11 T 28-03-2018 IPR013987 PhnA protein, N-terminal APY29_RS15955 a7f149300d221320fbbe9e4acf02bdc0 111 Gene3D G3DSA:2.30.30.40 42 110 3.2E-30 T 28-03-2018 APY29_RS15955 a7f149300d221320fbbe9e4acf02bdc0 111 SUPERFAMILY SSF57783 3 37 7.91E-12 T 28-03-2018 APY29_RS15955 a7f149300d221320fbbe9e4acf02bdc0 111 Gene3D G3DSA:2.20.25.10 2 40 3.3E-14 T 28-03-2018 APY29_RS15360 8bc12ad46b67d471c9255bf90f0ce226 476 Gene3D G3DSA:3.40.50.300 193 474 5.3E-70 T 28-03-2018 APY29_RS15360 8bc12ad46b67d471c9255bf90f0ce226 476 Gene3D G3DSA:1.10.860.10 24 175 6.4E-49 T 28-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal APY29_RS15360 8bc12ad46b67d471c9255bf90f0ce226 476 Pfam PF03796 DnaB-like helicase C terminal domain 211 466 3.0E-117 T 28-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 APY29_RS15360 8bc12ad46b67d471c9255bf90f0ce226 476 SUPERFAMILY SSF52540 209 280 7.29E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS15360 8bc12ad46b67d471c9255bf90f0ce226 476 SUPERFAMILY SSF52540 307 459 7.29E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS15360 8bc12ad46b67d471c9255bf90f0ce226 476 Pfam PF00772 DnaB-like helicase N terminal domain 33 134 2.0E-36 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 APY29_RS15360 8bc12ad46b67d471c9255bf90f0ce226 476 SUPERFAMILY SSF48024 31 143 7.06E-39 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 APY29_RS15360 8bc12ad46b67d471c9255bf90f0ce226 476 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 33 468 5.4E-178 T 28-03-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 APY29_RS00810 e46dc1d7045b1b35712d56bd3a2e16f9 1038 Gene3D G3DSA:3.20.20.80 573 937 1.2E-61 T 28-03-2018 APY29_RS00810 e46dc1d7045b1b35712d56bd3a2e16f9 1038 Gene3D G3DSA:2.60.40.1180 939 1037 1.2E-22 T 28-03-2018 APY29_RS00810 e46dc1d7045b1b35712d56bd3a2e16f9 1038 SUPERFAMILY SSF51445 546 934 4.88E-87 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS00810 e46dc1d7045b1b35712d56bd3a2e16f9 1038 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 385 1034 46.759 T 28-03-2018 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16 APY29_RS00810 e46dc1d7045b1b35712d56bd3a2e16f9 1038 Gene3D G3DSA:1.20.58.280 484 551 8.0E-8 T 28-03-2018 APY29_RS00810 e46dc1d7045b1b35712d56bd3a2e16f9 1038 Pfam PF11896 Domain of unknown function (DUF3416) 388 571 1.9E-49 T 28-03-2018 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16 APY29_RS00810 e46dc1d7045b1b35712d56bd3a2e16f9 1038 Gene3D G3DSA:3.20.20.80 12 357 9.0E-18 T 28-03-2018 APY29_RS00810 e46dc1d7045b1b35712d56bd3a2e16f9 1038 SMART SM00642 581 906 5.4E-5 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS00810 e46dc1d7045b1b35712d56bd3a2e16f9 1038 Pfam PF00128 Alpha amylase, catalytic domain 595 709 7.9E-5 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS00810 e46dc1d7045b1b35712d56bd3a2e16f9 1038 SUPERFAMILY SSF51445 58 242 3.26E-23 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS00810 e46dc1d7045b1b35712d56bd3a2e16f9 1038 Gene3D G3DSA:2.60.40.10 385 483 3.1E-33 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS02915 1edb21fd85b6e5ee480b35d048469ef7 628 SUPERFAMILY SSF50249 260 333 3.31E-25 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS02915 1edb21fd85b6e5ee480b35d048469ef7 628 Pfam PF07498 Rho termination factor, N-terminal domain 214 257 8.3E-13 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 APY29_RS02915 1edb21fd85b6e5ee480b35d048469ef7 628 Pfam PF07497 Rho termination factor, RNA-binding domain 262 334 1.2E-27 T 28-03-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 APY29_RS02915 1edb21fd85b6e5ee480b35d048469ef7 628 SMART SM00382 380 560 1.1E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS02915 1edb21fd85b6e5ee480b35d048469ef7 628 Gene3D G3DSA:1.10.720.10 214 252 5.2E-10 T 28-03-2018 APY29_RS02915 1edb21fd85b6e5ee480b35d048469ef7 628 SUPERFAMILY SSF68912 211 256 8.24E-7 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 APY29_RS02915 1edb21fd85b6e5ee480b35d048469ef7 628 Gene3D G3DSA:3.40.50.300 339 628 4.9E-54 T 28-03-2018 APY29_RS02915 1edb21fd85b6e5ee480b35d048469ef7 628 SMART SM00357 262 328 6.8E-15 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 APY29_RS02915 1edb21fd85b6e5ee480b35d048469ef7 628 SUPERFAMILY SSF52540 300 581 5.71E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS02915 1edb21fd85b6e5ee480b35d048469ef7 628 Gene3D G3DSA:2.40.50.140 259 326 3.8E-26 T 28-03-2018 APY29_RS02915 1edb21fd85b6e5ee480b35d048469ef7 628 Hamap MF_01884 Transcription termination factor Rho [rho]. 210 628 229.011 T 28-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 APY29_RS02915 1edb21fd85b6e5ee480b35d048469ef7 628 SMART SM00959 214 257 1.2E-11 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 APY29_RS02915 1edb21fd85b6e5ee480b35d048469ef7 628 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 370 573 2.5E-22 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APY29_RS02915 1edb21fd85b6e5ee480b35d048469ef7 628 TIGRFAM TIGR00767 rho: transcription termination factor Rho 211 627 2.0E-206 T 28-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 APY29_RS01695 5a60956bc37576ec48589990126ba4ba 257 SUPERFAMILY SSF53901 8 183 1.06E-9 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS01695 5a60956bc37576ec48589990126ba4ba 257 Gene3D G3DSA:3.40.47.10 1 163 8.9E-6 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS01695 5a60956bc37576ec48589990126ba4ba 257 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 31 166 4.6E-22 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal APY29_RS08780 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 Pfam PF12838 4Fe-4S dicluster domain 62 115 5.7E-12 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APY29_RS08780 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 Gene3D G3DSA:3.30.70.20 74 105 1.2E-12 T 28-03-2018 APY29_RS08780 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APY29_RS08780 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 SUPERFAMILY SSF54862 36 145 6.28E-25 T 28-03-2018 APY29_RS08780 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 139 4.1E-44 T 28-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08780 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 Gene3D G3DSA:3.30.70.20 106 139 1.0E-4 T 28-03-2018 APY29_RS08780 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 159 26.491 T 28-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08780 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APY29_RS08780 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 Gene3D G3DSA:3.30.70.20 28 73 1.3E-6 T 28-03-2018 APY29_RS04415 c56604ec540a5d5739216b76a4c5f4b3 265 SUPERFAMILY SSF52833 114 255 7.78E-37 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS04415 c56604ec540a5d5739216b76a4c5f4b3 265 Pfam PF13098 Thioredoxin-like domain 132 253 3.0E-25 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS04415 c56604ec540a5d5739216b76a4c5f4b3 265 Pfam PF10411 Disulfide bond isomerase protein N-terminus 50 101 8.7E-17 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal APY29_RS04415 c56604ec540a5d5739216b76a4c5f4b3 265 Gene3D G3DSA:3.40.30.10 121 261 1.5E-24 T 28-03-2018 APY29_RS04415 c56604ec540a5d5739216b76a4c5f4b3 265 Gene3D G3DSA:3.10.450.70 40 102 8.2E-18 T 28-03-2018 APY29_RS04415 c56604ec540a5d5739216b76a4c5f4b3 265 SUPERFAMILY SSF54423 55 102 3.66E-11 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal APY29_RS09800 6d0aa0913e3f2fae4e656fdfe222009a 528 PRINTS PR01036 Tetracycline resistance protein TetB signature 151 175 9.5E-5 T 28-03-2018 APY29_RS09800 6d0aa0913e3f2fae4e656fdfe222009a 528 PRINTS PR01036 Tetracycline resistance protein TetB signature 30 54 9.5E-5 T 28-03-2018 APY29_RS09800 6d0aa0913e3f2fae4e656fdfe222009a 528 PRINTS PR01036 Tetracycline resistance protein TetB signature 121 141 9.5E-5 T 28-03-2018 APY29_RS09800 6d0aa0913e3f2fae4e656fdfe222009a 528 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 28 513 1.8E-116 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 APY29_RS09800 6d0aa0913e3f2fae4e656fdfe222009a 528 Pfam PF07690 Major Facilitator Superfamily 33 425 6.2E-50 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS09800 6d0aa0913e3f2fae4e656fdfe222009a 528 Gene3D G3DSA:1.20.1250.20 275 528 2.7E-26 T 28-03-2018 APY29_RS09800 6d0aa0913e3f2fae4e656fdfe222009a 528 SUPERFAMILY SSF103473 19 205 9.02E-65 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS09800 6d0aa0913e3f2fae4e656fdfe222009a 528 SUPERFAMILY SSF103473 493 524 9.02E-65 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS09800 6d0aa0913e3f2fae4e656fdfe222009a 528 SUPERFAMILY SSF103473 264 435 9.02E-65 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS09800 6d0aa0913e3f2fae4e656fdfe222009a 528 Gene3D G3DSA:1.20.1250.20 20 214 2.2E-31 T 28-03-2018 APY29_RS19480 5a6dc67168abd78f9ff24dedcea7468a 156 SUPERFAMILY SSF54523 13 123 1.33E-8 T 28-03-2018 APY29_RS19480 5a6dc67168abd78f9ff24dedcea7468a 156 Pfam PF12019 Type II transport protein GspH 47 147 1.6E-9 T 28-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 APY29_RS19480 5a6dc67168abd78f9ff24dedcea7468a 156 PRINTS PR00885 Bacterial general secretion pathway protein H signature 8 22 2.1E-7 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 APY29_RS19480 5a6dc67168abd78f9ff24dedcea7468a 156 PRINTS PR00885 Bacterial general secretion pathway protein H signature 23 37 2.1E-7 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 APY29_RS19480 5a6dc67168abd78f9ff24dedcea7468a 156 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 9 151 4.3E-22 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 APY29_RS19480 5a6dc67168abd78f9ff24dedcea7468a 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 8.9E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS19480 5a6dc67168abd78f9ff24dedcea7468a 156 Gene3D G3DSA:3.55.40.10 41 156 5.9E-20 T 28-03-2018 APY29_RS19480 5a6dc67168abd78f9ff24dedcea7468a 156 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS19480 5a6dc67168abd78f9ff24dedcea7468a 156 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 32 1.7E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 SUPERFAMILY SSF82693 41 134 2.96E-28 T 28-03-2018 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 Pfam PF00873 AcrB/AcrD/AcrF family 3 1034 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 SUPERFAMILY SSF82714 185 275 3.79E-22 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 SUPERFAMILY SSF82714 729 815 2.75E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 SUPERFAMILY SSF82693 277 333 1.26E-26 T 28-03-2018 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 SUPERFAMILY SSF82693 139 184 1.26E-26 T 28-03-2018 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 SUPERFAMILY SSF82693 575 678 1.57E-24 T 28-03-2018 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 Gene3D G3DSA:3.30.2090.10 183 277 2.4E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 Gene3D G3DSA:3.30.70.1430 40 142 2.3E-28 T 28-03-2018 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 Gene3D G3DSA:3.30.70.1430 577 678 1.1E-18 T 28-03-2018 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 Gene3D G3DSA:3.30.70.1440 679 773 1.8E-20 T 28-03-2018 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 2.6E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.6E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 PRINTS PR00702 Acriflavin resistance protein family signature 631 645 2.6E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 2.6E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.6E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 2.6E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 2.6E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 2.6E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 2.6E-92 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1051 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 Gene3D G3DSA:1.20.1640.10 278 501 5.5E-51 T 28-03-2018 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 Gene3D G3DSA:1.20.1640.10 853 1038 7.0E-40 T 28-03-2018 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 SUPERFAMILY SSF82866 813 1038 1.83E-44 T 28-03-2018 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 Gene3D G3DSA:3.30.70.1320 774 852 2.0E-6 T 28-03-2018 APY29_RS15320 d3bbb8d8bd9c3b76bd0781e6dd1c2136 1058 SUPERFAMILY SSF82866 299 499 3.4E-51 T 28-03-2018 APY29_RS19645 cd550cc6adea4ae371dbed69b48f89d4 232 Pfam PF03099 Biotin/lipoate A/B protein ligase family 74 171 6.4E-9 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 APY29_RS19645 cd550cc6adea4ae371dbed69b48f89d4 232 SUPERFAMILY SSF55681 13 218 1.08E-70 T 28-03-2018 APY29_RS19645 cd550cc6adea4ae371dbed69b48f89d4 232 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 83 98 - T 28-03-2018 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 APY29_RS19645 cd550cc6adea4ae371dbed69b48f89d4 232 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 39 213 1.3E-64 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 APY29_RS19645 cd550cc6adea4ae371dbed69b48f89d4 232 PIRSF PIRSF016262 13 230 6.7E-61 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 APY29_RS19645 cd550cc6adea4ae371dbed69b48f89d4 232 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 87 140 5.0E-25 T 28-03-2018 APY29_RS19645 cd550cc6adea4ae371dbed69b48f89d4 232 Hamap MF_00013 Octanoyltransferase [lipB]. 17 218 38.85 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 APY29_RS19645 cd550cc6adea4ae371dbed69b48f89d4 232 Gene3D G3DSA:3.30.930.10 12 216 1.5E-64 T 28-03-2018 APY29_RS02490 65a6f8ee156b344fefe28ed064708816 443 Gene3D G3DSA:3.40.50.2000 14 256 1.6E-36 T 28-03-2018 APY29_RS02490 65a6f8ee156b344fefe28ed064708816 443 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 14 74 2.2E-9 T 28-03-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 APY29_RS02490 65a6f8ee156b344fefe28ed064708816 443 Gene3D G3DSA:3.40.50.2000 257 407 4.9E-32 T 28-03-2018 APY29_RS02490 65a6f8ee156b344fefe28ed064708816 443 SUPERFAMILY SSF53756 14 421 7.85E-82 T 28-03-2018 APY29_RS18970 f8b5c04ffcfba7ed401724dd7f60142a 325 Gene3D G3DSA:3.90.180.10 2 137 1.7E-37 T 28-03-2018 APY29_RS18970 f8b5c04ffcfba7ed401724dd7f60142a 325 SUPERFAMILY SSF51735 114 288 2.28E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS18970 f8b5c04ffcfba7ed401724dd7f60142a 325 Pfam PF13602 Zinc-binding dehydrogenase 186 323 6.3E-28 T 28-03-2018 APY29_RS18970 f8b5c04ffcfba7ed401724dd7f60142a 325 Gene3D G3DSA:3.40.50.720 138 309 5.7E-42 T 28-03-2018 APY29_RS18970 f8b5c04ffcfba7ed401724dd7f60142a 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 90 2.4E-7 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APY29_RS18970 f8b5c04ffcfba7ed401724dd7f60142a 325 SUPERFAMILY SSF50129 12 141 2.13E-37 T 28-03-2018 IPR011032 GroES-like APY29_RS18970 f8b5c04ffcfba7ed401724dd7f60142a 325 SMART SM00829 16 323 3.7E-40 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APY29_RS18970 f8b5c04ffcfba7ed401724dd7f60142a 325 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 8 325 7.1E-130 T 28-03-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 APY29_RS10675 5de06be491324344068d1bcbceb40911 521 Gene3D G3DSA:3.30.300.10 397 521 9.4E-52 T 28-03-2018 APY29_RS10675 5de06be491324344068d1bcbceb40911 521 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 208 521 4.4E-149 T 28-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 APY29_RS10675 5de06be491324344068d1bcbceb40911 521 Pfam PF00958 GMP synthase C terminal domain 429 520 3.0E-42 T 28-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 APY29_RS10675 5de06be491324344068d1bcbceb40911 521 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 9 200 3.9E-74 T 28-03-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 APY29_RS10675 5de06be491324344068d1bcbceb40911 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 1.5E-7 T 28-03-2018 APY29_RS10675 5de06be491324344068d1bcbceb40911 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 1.5E-7 T 28-03-2018 APY29_RS10675 5de06be491324344068d1bcbceb40911 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 173 186 1.5E-7 T 28-03-2018 APY29_RS10675 5de06be491324344068d1bcbceb40911 521 SUPERFAMILY SSF52402 193 415 1.19E-58 T 28-03-2018 APY29_RS10675 5de06be491324344068d1bcbceb40911 521 PRINTS PR00097 Anthranilate synthase component II signature 80 91 3.5E-6 T 28-03-2018 APY29_RS10675 5de06be491324344068d1bcbceb40911 521 PRINTS PR00097 Anthranilate synthase component II signature 53 62 3.5E-6 T 28-03-2018 APY29_RS10675 5de06be491324344068d1bcbceb40911 521 PRINTS PR00097 Anthranilate synthase component II signature 173 186 3.5E-6 T 28-03-2018 APY29_RS10675 5de06be491324344068d1bcbceb40911 521 Gene3D G3DSA:3.40.50.620 217 396 1.9E-36 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS10675 5de06be491324344068d1bcbceb40911 521 Pfam PF02540 NAD synthase 211 297 1.4E-8 T 28-03-2018 IPR022310 NAD/GMP synthase APY29_RS10675 5de06be491324344068d1bcbceb40911 521 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 521 55.121 T 28-03-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 APY29_RS10675 5de06be491324344068d1bcbceb40911 521 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 2.7E-6 T 28-03-2018 APY29_RS10675 5de06be491324344068d1bcbceb40911 521 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 9 23 2.7E-6 T 28-03-2018 APY29_RS10675 5de06be491324344068d1bcbceb40911 521 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 96 2.7E-6 T 28-03-2018 APY29_RS10675 5de06be491324344068d1bcbceb40911 521 SUPERFAMILY SSF52317 4 201 8.7E-55 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS10675 5de06be491324344068d1bcbceb40911 521 Gene3D G3DSA:3.40.50.880 4 216 1.0E-47 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS10675 5de06be491324344068d1bcbceb40911 521 SUPERFAMILY SSF54810 401 521 4.05E-49 T 28-03-2018 APY29_RS10675 5de06be491324344068d1bcbceb40911 521 Pfam PF00117 Glutamine amidotransferase class-I 11 196 2.1E-38 T 28-03-2018 IPR017926 Glutamine amidotransferase APY29_RS01120 f4c312cdce4ebcf2ac18dd01b94e9a1c 121 Gene3D G3DSA:3.30.70.1090 13 105 8.9E-4 T 28-03-2018 APY29_RS01120 f4c312cdce4ebcf2ac18dd01b94e9a1c 121 Pfam PF05336 L-rhamnose mutarotase 5 112 5.9E-26 T 28-03-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 APY29_RS01120 f4c312cdce4ebcf2ac18dd01b94e9a1c 121 SUPERFAMILY SSF54909 3 113 2.73E-24 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel APY29_RS23645 270a34d341bff718fe2a60d659f6de86 209 PIRSF PIRSF009320 1 209 1.9E-66 T 28-03-2018 APY29_RS23645 270a34d341bff718fe2a60d659f6de86 209 Gene3D G3DSA:3.40.50.300 1 65 9.1E-19 T 28-03-2018 APY29_RS23645 270a34d341bff718fe2a60d659f6de86 209 Gene3D G3DSA:3.40.50.300 66 209 4.5E-23 T 28-03-2018 APY29_RS23645 270a34d341bff718fe2a60d659f6de86 209 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 182 6.1E-20 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain APY29_RS23645 270a34d341bff718fe2a60d659f6de86 209 SUPERFAMILY SSF52540 1 207 2.51E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS12890 3e20365de2eee2680d334e5e0e02e131 112 SUPERFAMILY SSF101801 29 110 1.96E-25 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) APY29_RS12890 3e20365de2eee2680d334e5e0e02e131 112 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 33 102 1.2E-25 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) APY29_RS12890 3e20365de2eee2680d334e5e0e02e131 112 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 29 104 2.4E-34 T 28-03-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 APY29_RS12890 3e20365de2eee2680d334e5e0e02e131 112 Gene3D G3DSA:2.30.330.10 18 112 9.3E-31 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) APY29_RS12890 3e20365de2eee2680d334e5e0e02e131 112 PRINTS PR00956 Flagellar motor switch protein FliN signature 65 78 2.9E-26 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 APY29_RS12890 3e20365de2eee2680d334e5e0e02e131 112 PRINTS PR00956 Flagellar motor switch protein FliN signature 32 48 2.9E-26 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 APY29_RS12890 3e20365de2eee2680d334e5e0e02e131 112 PRINTS PR00956 Flagellar motor switch protein FliN signature 49 65 2.9E-26 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 APY29_RS12890 3e20365de2eee2680d334e5e0e02e131 112 PRINTS PR00956 Flagellar motor switch protein FliN signature 78 93 2.9E-26 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 APY29_RS03585 44ef13dd1238ae350e346e4ece56dc4a 150 Pfam PF02469 Fasciclin domain 16 150 6.1E-34 T 28-03-2018 IPR000782 FAS1 domain APY29_RS03585 44ef13dd1238ae350e346e4ece56dc4a 150 Gene3D G3DSA:2.30.180.10 5 150 3.8E-39 T 28-03-2018 IPR000782 FAS1 domain APY29_RS03585 44ef13dd1238ae350e346e4ece56dc4a 150 SMART SM00554 40 150 4.3E-24 T 28-03-2018 IPR000782 FAS1 domain APY29_RS03585 44ef13dd1238ae350e346e4ece56dc4a 150 SUPERFAMILY SSF82153 5 150 5.49E-42 T 28-03-2018 IPR000782 FAS1 domain APY29_RS06765 8342b443d5269eb1f641abc8042774d2 472 Gene3D G3DSA:3.40.640.10 82 348 1.2E-74 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS06765 8342b443d5269eb1f641abc8042774d2 472 PIRSF PIRSF000521 37 440 6.7E-28 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APY29_RS06765 8342b443d5269eb1f641abc8042774d2 472 Pfam PF00202 Aminotransferase class-III 46 465 9.2E-117 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APY29_RS06765 8342b443d5269eb1f641abc8042774d2 472 SUPERFAMILY SSF53383 26 466 2.33E-125 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS06765 8342b443d5269eb1f641abc8042774d2 472 Gene3D G3DSA:3.90.1150.10 349 472 7.4E-25 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS06765 8342b443d5269eb1f641abc8042774d2 472 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 31 465 1.3E-166 T 28-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 APY29_RS06765 8342b443d5269eb1f641abc8042774d2 472 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 274 311 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APY29_RS17280 1510f277f7d17c65cb4ccfeb2ad57bee 186 SUPERFAMILY SSF47240 37 181 9.76E-40 T 28-03-2018 IPR009078 Ferritin-like superfamily APY29_RS17280 1510f277f7d17c65cb4ccfeb2ad57bee 186 Pfam PF00210 Ferritin-like domain 44 181 1.2E-28 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APY29_RS17280 1510f277f7d17c65cb4ccfeb2ad57bee 186 Gene3D G3DSA:1.20.1260.10 10 182 2.1E-45 T 28-03-2018 IPR012347 Ferritin-related APY29_RS17280 1510f277f7d17c65cb4ccfeb2ad57bee 186 PIRSF PIRSF018063 19 186 5.7E-68 T 28-03-2018 IPR014490 DNA-binding protein from starved cells-like APY29_RS18695 3eea90fafd2e69e2a3789da32d4d5711 395 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 235 370 1.3E-14 T 28-03-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain APY29_RS18695 3eea90fafd2e69e2a3789da32d4d5711 395 SUPERFAMILY SSF47203 232 387 2.09E-22 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APY29_RS18695 3eea90fafd2e69e2a3789da32d4d5711 395 Gene3D G3DSA:1.20.140.10 228 395 2.3E-22 T 28-03-2018 APY29_RS18695 3eea90fafd2e69e2a3789da32d4d5711 395 PIRSF PIRSF016578 1 393 2.1E-25 T 28-03-2018 APY29_RS18695 3eea90fafd2e69e2a3789da32d4d5711 395 SUPERFAMILY SSF56645 12 216 2.23E-40 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APY29_RS18695 3eea90fafd2e69e2a3789da32d4d5711 395 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 25 115 1.1E-12 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 APY29_RS18695 3eea90fafd2e69e2a3789da32d4d5711 395 Gene3D G3DSA:2.40.110.10 120 219 5.1E-12 T 28-03-2018 APY29_RS18695 3eea90fafd2e69e2a3789da32d4d5711 395 Gene3D G3DSA:1.10.540.10 7 119 1.2E-17 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 APY29_RS22205 1796a91ac6520288b9d1dcf30a0b1ce7 469 Gene3D G3DSA:3.10.20.70 2 104 4.9E-28 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APY29_RS22205 1796a91ac6520288b9d1dcf30a0b1ce7 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 28-03-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 APY29_RS22205 1796a91ac6520288b9d1dcf30a0b1ce7 469 Pfam PF00120 Glutamine synthetase, catalytic domain 102 466 6.0E-131 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APY29_RS22205 1796a91ac6520288b9d1dcf30a0b1ce7 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 28-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 APY29_RS22205 1796a91ac6520288b9d1dcf30a0b1ce7 469 SMART SM01230 102 379 4.7E-138 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APY29_RS22205 1796a91ac6520288b9d1dcf30a0b1ce7 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 467 1.8E-193 T 28-03-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APY29_RS22205 1796a91ac6520288b9d1dcf30a0b1ce7 469 Gene3D G3DSA:3.30.590.10 105 458 5.8E-119 T 28-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 APY29_RS22205 1796a91ac6520288b9d1dcf30a0b1ce7 469 SUPERFAMILY SSF54368 3 100 1.14E-35 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APY29_RS22205 1796a91ac6520288b9d1dcf30a0b1ce7 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 4.6E-29 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APY29_RS22205 1796a91ac6520288b9d1dcf30a0b1ce7 469 SUPERFAMILY SSF55931 102 467 3.24E-131 T 28-03-2018 APY29_RS17090 ba2e1e11d569518b15df63e6477c437d 248 SUPERFAMILY SSF141868 20 237 2.88E-58 T 28-03-2018 IPR001633 EAL domain APY29_RS17090 ba2e1e11d569518b15df63e6477c437d 248 Pfam PF00563 EAL domain 21 236 4.9E-49 T 28-03-2018 IPR001633 EAL domain APY29_RS17090 ba2e1e11d569518b15df63e6477c437d 248 SMART SM00052 12 241 2.3E-29 T 28-03-2018 IPR001633 EAL domain APY29_RS17090 ba2e1e11d569518b15df63e6477c437d 248 Gene3D G3DSA:3.20.20.450 8 241 1.2E-54 T 28-03-2018 IPR001633 EAL domain APY29_RS01500 e58b4ef9d2824b312edc74886cf5b07e 438 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 6 430 1.6E-122 T 28-03-2018 IPR017735 Type VI secretion system, FHA domain-containing protein APY29_RS01500 e58b4ef9d2824b312edc74886cf5b07e 438 SUPERFAMILY SSF49879 29 112 2.3E-19 T 28-03-2018 IPR008984 SMAD/FHA domain GO:0005515 APY29_RS01500 e58b4ef9d2824b312edc74886cf5b07e 438 SMART SM00240 30 79 6.1E-4 T 28-03-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 APY29_RS01500 e58b4ef9d2824b312edc74886cf5b07e 438 Pfam PF00498 FHA domain 32 95 6.6E-15 T 28-03-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 APY29_RS01500 e58b4ef9d2824b312edc74886cf5b07e 438 Gene3D G3DSA:2.60.200.20 11 227 5.2E-17 T 28-03-2018 APY29_RS03380 d5b88ac0e062301f4c7964b527db139d 394 Gene3D G3DSA:3.40.50.720 21 314 6.3E-41 T 28-03-2018 APY29_RS03380 d5b88ac0e062301f4c7964b527db139d 394 Gene3D G3DSA:3.40.50.720 315 389 1.1E-12 T 28-03-2018 APY29_RS03380 d5b88ac0e062301f4c7964b527db139d 394 Pfam PF03275 UDP-galactopyranose mutase 169 365 7.1E-83 T 28-03-2018 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 APY29_RS03380 d5b88ac0e062301f4c7964b527db139d 394 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 22 380 5.2E-121 T 28-03-2018 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 APY29_RS03380 d5b88ac0e062301f4c7964b527db139d 394 Pfam PF13450 NAD(P)-binding Rossmann-like domain 26 90 4.0E-16 T 28-03-2018 APY29_RS03380 d5b88ac0e062301f4c7964b527db139d 394 SUPERFAMILY SSF54373 267 332 2.16E-22 T 28-03-2018 APY29_RS03380 d5b88ac0e062301f4c7964b527db139d 394 SUPERFAMILY SSF51971 350 385 1.88E-51 T 28-03-2018 APY29_RS03380 d5b88ac0e062301f4c7964b527db139d 394 SUPERFAMILY SSF51971 22 285 1.88E-51 T 28-03-2018 APY29_RS03495 ee2cd79c88aa39b0de361e747385b6f9 404 Pfam PF01266 FAD dependent oxidoreductase 126 402 1.2E-17 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APY29_RS03495 ee2cd79c88aa39b0de361e747385b6f9 404 Gene3D G3DSA:3.40.50.720 3 117 1.8E-6 T 28-03-2018 APY29_RS03495 ee2cd79c88aa39b0de361e747385b6f9 404 Gene3D G3DSA:3.30.9.10 281 403 1.0E-14 T 28-03-2018 APY29_RS03495 ee2cd79c88aa39b0de361e747385b6f9 404 SUPERFAMILY SSF51971 126 342 2.94E-20 T 28-03-2018 APY29_RS03495 ee2cd79c88aa39b0de361e747385b6f9 404 ProSitePatterns PS00677 D-amino acid oxidases signature. 91 109 - T 28-03-2018 IPR006181 D-amino acid oxidase, conserved site GO:0003884|GO:0055114 Reactome: R-HSA-389661 APY29_RS03495 ee2cd79c88aa39b0de361e747385b6f9 404 Gene3D G3DSA:3.40.50.720 118 247 1.9E-7 T 28-03-2018 APY29_RS01140 8cc0fb5355fce0bb283f0a6b51084d89 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 6.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS01140 8cc0fb5355fce0bb283f0a6b51084d89 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS01140 8cc0fb5355fce0bb283f0a6b51084d89 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 6.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS01140 8cc0fb5355fce0bb283f0a6b51084d89 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 6.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS01140 8cc0fb5355fce0bb283f0a6b51084d89 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 6.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS01140 8cc0fb5355fce0bb283f0a6b51084d89 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 6.4E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS01140 8cc0fb5355fce0bb283f0a6b51084d89 256 SUPERFAMILY SSF51735 14 255 2.68E-73 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS01140 8cc0fb5355fce0bb283f0a6b51084d89 256 Gene3D G3DSA:3.40.50.720 4 256 5.2E-67 T 28-03-2018 APY29_RS01140 8cc0fb5355fce0bb283f0a6b51084d89 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APY29_RS01140 8cc0fb5355fce0bb283f0a6b51084d89 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 255 3.5E-62 T 28-03-2018 APY29_RS01140 8cc0fb5355fce0bb283f0a6b51084d89 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.6E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS01140 8cc0fb5355fce0bb283f0a6b51084d89 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.6E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS01140 8cc0fb5355fce0bb283f0a6b51084d89 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.6E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS16395 162da9dee92cf5c678a70f7e67b442bf 449 Gene3D G3DSA:2.60.120.200 16 279 7.4E-67 T 28-03-2018 APY29_RS16395 162da9dee92cf5c678a70f7e67b442bf 449 SUPERFAMILY SSF49785 312 447 1.11E-5 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS16395 162da9dee92cf5c678a70f7e67b442bf 449 Gene3D G3DSA:2.60.120.430 283 449 1.3E-22 T 28-03-2018 APY29_RS16395 162da9dee92cf5c678a70f7e67b442bf 449 Pfam PF00722 Glycosyl hydrolases family 16 64 270 1.3E-21 T 28-03-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 APY29_RS16395 162da9dee92cf5c678a70f7e67b442bf 449 SUPERFAMILY SSF49899 22 276 6.34E-65 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain APY29_RS14445 c2400a5ce0f8306a73e02689418f2545 703 SMART SM00304 307 358 6.6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS14445 c2400a5ce0f8306a73e02689418f2545 703 SMART SM00304 397 449 38.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS14445 c2400a5ce0f8306a73e02689418f2545 703 SMART SM00304 216 268 1.3E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS14445 c2400a5ce0f8306a73e02689418f2545 703 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 185 6.0E-21 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain APY29_RS14445 c2400a5ce0f8306a73e02689418f2545 703 SMART SM00283 450 697 2.0E-84 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS14445 c2400a5ce0f8306a73e02689418f2545 703 SUPERFAMILY SSF58104 417 698 9.81E-68 T 28-03-2018 APY29_RS14445 c2400a5ce0f8306a73e02689418f2545 703 Gene3D G3DSA:1.10.287.950 238 505 2.7E-21 T 28-03-2018 APY29_RS14445 c2400a5ce0f8306a73e02689418f2545 703 Gene3D G3DSA:1.10.287.950 506 701 4.9E-45 T 28-03-2018 APY29_RS14445 c2400a5ce0f8306a73e02689418f2545 703 Gene3D G3DSA:1.20.120.30 26 188 1.7E-7 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain APY29_RS14445 c2400a5ce0f8306a73e02689418f2545 703 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 509 664 3.7E-49 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS14445 c2400a5ce0f8306a73e02689418f2545 703 SUPERFAMILY SSF158472 216 267 4.58E-8 T 28-03-2018 APY29_RS21020 6d04b2a86a43cebf302b73c7f82b35ba 807 SUPERFAMILY SSF50182 624 688 3.92E-15 T 28-03-2018 IPR010920 LSM domain APY29_RS21020 6d04b2a86a43cebf302b73c7f82b35ba 807 Gene3D G3DSA:3.30.70.100 690 783 2.8E-13 T 28-03-2018 APY29_RS21020 6d04b2a86a43cebf302b73c7f82b35ba 807 SUPERFAMILY SSF82689 690 783 1.06E-14 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APY29_RS21020 6d04b2a86a43cebf302b73c7f82b35ba 807 Gene3D G3DSA:2.30.30.60 639 689 1.5E-12 T 28-03-2018 APY29_RS21020 6d04b2a86a43cebf302b73c7f82b35ba 807 Pfam PF00924 Mechanosensitive ion channel 580 776 9.2E-44 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APY29_RS21020 6d04b2a86a43cebf302b73c7f82b35ba 807 SUPERFAMILY SSF82861 539 621 7.06E-12 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APY29_RS21020 6d04b2a86a43cebf302b73c7f82b35ba 807 Pfam PF12607 Protein of unknown function (DUF3772) 120 181 8.5E-16 T 28-03-2018 IPR022249 Domain of unknown function DUF3772 APY29_RS17850 a8116bdf9433907f76a0cb150f2a5316 679 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 15 337 2.5E-71 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 APY29_RS17850 a8116bdf9433907f76a0cb150f2a5316 679 Gene3D G3DSA:3.40.50.720 372 484 7.6E-23 T 28-03-2018 APY29_RS17850 a8116bdf9433907f76a0cb150f2a5316 679 Gene3D G3DSA:3.20.20.70 11 371 6.2E-103 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS17850 a8116bdf9433907f76a0cb150f2a5316 679 SUPERFAMILY SSF51395 10 371 6.02E-104 T 28-03-2018 APY29_RS17850 a8116bdf9433907f76a0cb150f2a5316 679 SUPERFAMILY SSF51971 342 528 1.47E-41 T 28-03-2018 APY29_RS17850 a8116bdf9433907f76a0cb150f2a5316 679 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 384 644 4.9E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS17850 a8116bdf9433907f76a0cb150f2a5316 679 SUPERFAMILY SSF51905 469 527 3.17E-19 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS17850 a8116bdf9433907f76a0cb150f2a5316 679 SUPERFAMILY SSF51905 563 657 3.17E-19 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS17850 a8116bdf9433907f76a0cb150f2a5316 679 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 385 407 2.0E-5 T 28-03-2018 APY29_RS17850 a8116bdf9433907f76a0cb150f2a5316 679 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 522 531 2.0E-5 T 28-03-2018 APY29_RS17850 a8116bdf9433907f76a0cb150f2a5316 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 625 641 7.6E-11 T 28-03-2018 APY29_RS17850 a8116bdf9433907f76a0cb150f2a5316 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 386 405 7.6E-11 T 28-03-2018 APY29_RS17850 a8116bdf9433907f76a0cb150f2a5316 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 506 524 7.6E-11 T 28-03-2018 APY29_RS17850 a8116bdf9433907f76a0cb150f2a5316 679 Gene3D G3DSA:3.50.50.60 485 632 8.9E-33 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS05580 f96094cab8cc010d318c3bba7cf27815 327 SUPERFAMILY SSF46785 1 88 5.69E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS05580 f96094cab8cc010d318c3bba7cf27815 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.8E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS05580 f96094cab8cc010d318c3bba7cf27815 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.8E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS05580 f96094cab8cc010d318c3bba7cf27815 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.8E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS05580 f96094cab8cc010d318c3bba7cf27815 327 Gene3D G3DSA:1.10.10.10 1 88 1.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS05580 f96094cab8cc010d318c3bba7cf27815 327 Pfam PF03466 LysR substrate binding domain 89 292 2.6E-38 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS05580 f96094cab8cc010d318c3bba7cf27815 327 SUPERFAMILY SSF53850 91 297 2.57E-36 T 28-03-2018 APY29_RS05580 f96094cab8cc010d318c3bba7cf27815 327 Gene3D G3DSA:3.40.190.10 184 266 2.2E-15 T 28-03-2018 APY29_RS05580 f96094cab8cc010d318c3bba7cf27815 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 3.4E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS05580 f96094cab8cc010d318c3bba7cf27815 327 Gene3D G3DSA:3.40.190.10 90 183 3.3E-19 T 28-03-2018 APY29_RS01210 6873528448f2989f0d3094e0ce7a28d5 336 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 28 95 3.8E-15 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 APY29_RS01210 6873528448f2989f0d3094e0ce7a28d5 336 Gene3D G3DSA:3.20.20.190 22 336 4.7E-31 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APY29_RS01210 6873528448f2989f0d3094e0ce7a28d5 336 SUPERFAMILY SSF51695 22 165 1.44E-26 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APY29_RS23730 85b3d1bdc757e81950cd667c576da98e 994 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 15 290 2.0E-89 T 28-03-2018 IPR014059 Conjugative relaxase, N-terminal APY29_RS23730 85b3d1bdc757e81950cd667c576da98e 994 Pfam PF13604 AAA domain 488 670 2.6E-42 T 28-03-2018 APY29_RS23730 85b3d1bdc757e81950cd667c576da98e 994 SUPERFAMILY SSF55464 3 291 3.2E-94 T 28-03-2018 APY29_RS23730 85b3d1bdc757e81950cd667c576da98e 994 Pfam PF08751 TrwC relaxase 15 286 1.5E-81 T 28-03-2018 IPR014862 TrwC relaxase APY29_RS23730 85b3d1bdc757e81950cd667c576da98e 994 Gene3D G3DSA:3.40.50.300 422 668 1.7E-19 T 28-03-2018 APY29_RS23730 85b3d1bdc757e81950cd667c576da98e 994 SUPERFAMILY SSF52540 601 660 1.42E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23730 85b3d1bdc757e81950cd667c576da98e 994 SUPERFAMILY SSF52540 695 727 1.42E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23730 85b3d1bdc757e81950cd667c576da98e 994 SUPERFAMILY SSF52540 806 929 1.42E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23730 85b3d1bdc757e81950cd667c576da98e 994 Pfam PF13538 UvrD-like helicase C-terminal domain 873 919 1.7E-7 T 28-03-2018 IPR027785 UvrD-like helicase C-terminal domain APY29_RS23730 85b3d1bdc757e81950cd667c576da98e 994 SUPERFAMILY SSF52540 484 637 9.41E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS10555 65faae1a64b2dbd99bda854e8e5d5c34 456 Pfam PF13416 Bacterial extracellular solute-binding protein 44 354 1.5E-43 T 28-03-2018 APY29_RS10555 65faae1a64b2dbd99bda854e8e5d5c34 456 Gene3D G3DSA:3.40.190.10 28 158 9.2E-29 T 28-03-2018 APY29_RS10555 65faae1a64b2dbd99bda854e8e5d5c34 456 SUPERFAMILY SSF53850 28 408 3.31E-88 T 28-03-2018 APY29_RS10555 65faae1a64b2dbd99bda854e8e5d5c34 456 Gene3D G3DSA:3.40.190.10 159 374 1.9E-38 T 28-03-2018 APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 Gene3D G3DSA:2.130.10.10 38 166 1.1E-23 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 Pfam PF07495 Y_Y_Y domain 707 768 2.2E-14 T 28-03-2018 IPR011123 Two component regulator three Y APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 Gene3D G3DSA:3.40.50.2300 1061 1189 1.8E-30 T 28-03-2018 APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 SMART SM00448 1070 1181 4.4E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 Gene3D G3DSA:3.30.565.10 883 1049 3.7E-44 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 SUPERFAMILY SSF55874 877 1048 1.31E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 SUPERFAMILY SSF63829 422 631 3.14E-14 T 28-03-2018 APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 Gene3D G3DSA:1.10.287.130 813 882 6.2E-17 T 28-03-2018 APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 SUPERFAMILY SSF63829 210 434 9.15E-10 T 28-03-2018 APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 SMART SM00388 823 888 9.6E-22 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 935 1047 7.1E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 SUPERFAMILY SSF63829 34 251 1.16E-12 T 28-03-2018 APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 SMART SM00387 935 1049 2.7E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 SUPERFAMILY SSF52172 1069 1188 5.98E-31 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 SUPERFAMILY SSF47384 812 889 4.71E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 Pfam PF00512 His Kinase A (phospho-acceptor) domain 823 888 8.2E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 Gene3D G3DSA:2.130.10.10 167 441 7.3E-16 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 Pfam PF07494 Two component regulator propeller 85 106 0.0056 T 28-03-2018 IPR011110 Two component regulator propeller APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 PRINTS PR00344 Bacterial sensor protein C-terminal signature 973 987 1.9E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 PRINTS PR00344 Bacterial sensor protein C-terminal signature 991 1001 1.9E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1033 1046 1.9E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1009 1027 1.9E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 Gene3D G3DSA:2.120.10.30 474 655 1.1E-10 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS06985 a7eb09a24c42ce8d57c71c8e7977aac0 1189 Pfam PF00072 Response regulator receiver domain 1072 1180 5.7E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS10765 782568c84121c2ef66951f1e2fb1d42c 89 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 14 85 2.0E-4 T 28-03-2018 APY29_RS10765 782568c84121c2ef66951f1e2fb1d42c 89 PIRSF PIRSF017854 5 89 4.6E-35 T 28-03-2018 IPR016704 Conjugal transfer, TrbD APY29_RS10765 782568c84121c2ef66951f1e2fb1d42c 89 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 11 85 2.0E-11 T 28-03-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB APY29_RS05310 deec53b17b6a988c59db1ca0687d60af 312 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 6 302 2.4E-79 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APY29_RS05310 deec53b17b6a988c59db1ca0687d60af 312 Gene3D G3DSA:3.90.245.10 1 312 1.7E-92 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APY29_RS05310 deec53b17b6a988c59db1ca0687d60af 312 SUPERFAMILY SSF53590 4 309 1.1E-87 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APY29_RS15145 7113474e12d39e88ec4823c8530a4960 589 Pfam PF00005 ABC transporter 366 515 6.1E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS15145 7113474e12d39e88ec4823c8530a4960 589 SMART SM00382 375 561 3.3E-20 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS15145 7113474e12d39e88ec4823c8530a4960 589 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 14 586 5.2E-261 T 28-03-2018 IPR011918 ABC transporter, ATP-binding/permease protein APY29_RS15145 7113474e12d39e88ec4823c8530a4960 589 Gene3D G3DSA:3.40.50.300 345 582 3.3E-76 T 28-03-2018 APY29_RS15145 7113474e12d39e88ec4823c8530a4960 589 SUPERFAMILY SSF90123 19 329 2.62E-72 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS15145 7113474e12d39e88ec4823c8530a4960 589 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS15145 7113474e12d39e88ec4823c8530a4960 589 Gene3D G3DSA:1.20.1560.10 7 334 2.4E-66 T 28-03-2018 APY29_RS15145 7113474e12d39e88ec4823c8530a4960 589 Pfam PF00664 ABC transporter transmembrane region 34 296 2.5E-48 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS15145 7113474e12d39e88ec4823c8530a4960 589 SUPERFAMILY SSF52540 340 586 3.73E-88 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS21920 9f29d7f73cc8e73fea23e39bc4c73b79 431 PIRSF PIRSF001362 1 428 2.5E-234 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 APY29_RS21920 9f29d7f73cc8e73fea23e39bc4c73b79 431 SUPERFAMILY SSF51621 3 425 4.93E-155 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APY29_RS21920 9f29d7f73cc8e73fea23e39bc4c73b79 431 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 248 4.4E-106 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 APY29_RS21920 9f29d7f73cc8e73fea23e39bc4c73b79 431 Gene3D G3DSA:3.20.20.60 1 408 4.7E-147 T 28-03-2018 APY29_RS21920 9f29d7f73cc8e73fea23e39bc4c73b79 431 Pfam PF00463 Isocitrate lyase family 13 248 1.7E-56 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 APY29_RS21920 9f29d7f73cc8e73fea23e39bc4c73b79 431 Pfam PF00463 Isocitrate lyase family 249 425 8.7E-44 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 APY29_RS21920 9f29d7f73cc8e73fea23e39bc4c73b79 431 ProSitePatterns PS00161 Isocitrate lyase signature. 186 191 - T 28-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 APY29_RS05630 d17473c6221d67f483560e2d0c1b5528 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 3.9E-147 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 APY29_RS05630 d17473c6221d67f483560e2d0c1b5528 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 30 257 1.9E-57 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 APY29_RS05630 d17473c6221d67f483560e2d0c1b5528 302 PIRSF PIRSF002936 2 302 3.2E-145 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 APY29_RS05630 d17473c6221d67f483560e2d0c1b5528 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 54.814 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 APY29_RS05630 d17473c6221d67f483560e2d0c1b5528 302 Gene3D G3DSA:3.40.50.620 6 269 2.1E-37 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS05630 d17473c6221d67f483560e2d0c1b5528 302 SUPERFAMILY SSF52402 6 210 6.98E-69 T 28-03-2018 APY29_RS13370 8f5b29ed1735bb30f365c066528d0484 619 Gene3D G3DSA:3.40.50.300 3 428 9.9E-29 T 28-03-2018 APY29_RS13370 8f5b29ed1735bb30f365c066528d0484 619 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 31 49 3.3E-5 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS13370 8f5b29ed1735bb30f365c066528d0484 619 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 10 30 3.3E-5 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS13370 8f5b29ed1735bb30f365c066528d0484 619 Pfam PF07670 Nucleoside recognition 455 588 2.3E-25 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 APY29_RS13370 8f5b29ed1735bb30f365c066528d0484 619 Pfam PF07670 Nucleoside recognition 286 380 4.9E-13 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 APY29_RS13370 8f5b29ed1735bb30f365c066528d0484 619 Pfam PF02421 Ferrous iron transport protein B 9 167 6.5E-52 T 28-03-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 APY29_RS13370 8f5b29ed1735bb30f365c066528d0484 619 SUPERFAMILY SSF52540 8 172 2.02E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS13370 8f5b29ed1735bb30f365c066528d0484 619 Pfam PF07664 Ferrous iron transport protein B C terminus 398 450 1.8E-14 T 28-03-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 APY29_RS11345 b0053cb56314171c3972899939ad2333 378 Pfam PF07514 Putative helicase 27 340 7.6E-129 T 28-03-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative APY29_RS11345 b0053cb56314171c3972899939ad2333 378 Gene3D G3DSA:1.10.3210.10 75 281 5.2E-8 T 28-03-2018 APY29_RS11345 b0053cb56314171c3972899939ad2333 378 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 26 243 2.4E-90 T 28-03-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class APY29_RS11345 b0053cb56314171c3972899939ad2333 378 SUPERFAMILY SSF109604 47 144 5.61E-5 T 28-03-2018 APY29_RS22155 6e23c0aeaedad0a92ef2af949d149ffd 421 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 6 379 3.8E-46 T 28-03-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 APY29_RS22155 6e23c0aeaedad0a92ef2af949d149ffd 421 SUPERFAMILY SSF48452 250 349 5.18E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS22155 6e23c0aeaedad0a92ef2af949d149ffd 421 SUPERFAMILY SSF48452 88 174 5.18E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS22155 6e23c0aeaedad0a92ef2af949d149ffd 421 Gene3D G3DSA:1.25.20.10 80 416 1.4E-16 T 28-03-2018 APY29_RS22155 6e23c0aeaedad0a92ef2af949d149ffd 421 Pfam PF07219 HemY protein N-terminus 33 132 2.2E-17 T 28-03-2018 IPR010817 HemY, N-terminal APY29_RS10535 0c1ab2abfb195c4c37fd4424cfbc4f4c 89 Pfam PF01722 BolA-like protein 11 87 5.8E-28 T 28-03-2018 IPR002634 BolA protein APY29_RS10535 0c1ab2abfb195c4c37fd4424cfbc4f4c 89 SUPERFAMILY SSF82657 2 87 9.55E-25 T 28-03-2018 IPR002634 BolA protein APY29_RS10535 0c1ab2abfb195c4c37fd4424cfbc4f4c 89 Gene3D G3DSA:3.30.300.90 1 89 1.6E-25 T 28-03-2018 APY29_RS10535 0c1ab2abfb195c4c37fd4424cfbc4f4c 89 PIRSF PIRSF003113 1 89 7.6E-26 T 28-03-2018 IPR002634 BolA protein APY29_RS12085 1ef001b98d42643699ed767e7da78bd7 603 Pfam PF00563 EAL domain 352 583 1.0E-64 T 28-03-2018 IPR001633 EAL domain APY29_RS12085 1ef001b98d42643699ed767e7da78bd7 603 Gene3D G3DSA:3.30.450.40 36 169 4.7E-7 T 28-03-2018 IPR029016 GAF domain-like APY29_RS12085 1ef001b98d42643699ed767e7da78bd7 603 Gene3D G3DSA:3.20.20.450 341 591 2.1E-83 T 28-03-2018 IPR001633 EAL domain APY29_RS12085 1ef001b98d42643699ed767e7da78bd7 603 SUPERFAMILY SSF55781 38 168 3.3E-7 T 28-03-2018 IPR029016 GAF domain-like APY29_RS12085 1ef001b98d42643699ed767e7da78bd7 603 SMART SM00052 343 588 1.4E-86 T 28-03-2018 IPR001633 EAL domain APY29_RS12085 1ef001b98d42643699ed767e7da78bd7 603 SUPERFAMILY SSF55073 180 320 4.47E-8 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS12085 1ef001b98d42643699ed767e7da78bd7 603 Gene3D G3DSA:3.30.70.270 174 340 3.1E-15 T 28-03-2018 APY29_RS12085 1ef001b98d42643699ed767e7da78bd7 603 SUPERFAMILY SSF141868 353 595 4.32E-75 T 28-03-2018 IPR001633 EAL domain APY29_RS01095 728b65992073c54f68a29516999d4256 1149 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 894 1001 7.0E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS01095 728b65992073c54f68a29516999d4256 1149 PRINTS PR00344 Bacterial sensor protein C-terminal signature 988 1001 7.8E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS01095 728b65992073c54f68a29516999d4256 1149 PRINTS PR00344 Bacterial sensor protein C-terminal signature 947 957 7.8E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS01095 728b65992073c54f68a29516999d4256 1149 PRINTS PR00344 Bacterial sensor protein C-terminal signature 929 943 7.8E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS01095 728b65992073c54f68a29516999d4256 1149 PRINTS PR00344 Bacterial sensor protein C-terminal signature 964 982 7.8E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS01095 728b65992073c54f68a29516999d4256 1149 Pfam PF12860 PAS fold 643 757 1.2E-43 T 28-03-2018 APY29_RS01095 728b65992073c54f68a29516999d4256 1149 SUPERFAMILY SSF52172 1028 1145 2.28E-19 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS01095 728b65992073c54f68a29516999d4256 1149 Gene3D G3DSA:3.30.450.20 633 788 5.7E-26 T 28-03-2018 APY29_RS01095 728b65992073c54f68a29516999d4256 1149 Pfam PF00512 His Kinase A (phospho-acceptor) domain 783 849 1.5E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS01095 728b65992073c54f68a29516999d4256 1149 Gene3D G3DSA:1.10.287.130 789 843 1.2E-10 T 28-03-2018 APY29_RS01095 728b65992073c54f68a29516999d4256 1149 SUPERFAMILY SSF55785 628 750 3.32E-11 T 28-03-2018 IPR000014 PAS domain APY29_RS01095 728b65992073c54f68a29516999d4256 1149 SMART SM00388 783 849 1.4E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS01095 728b65992073c54f68a29516999d4256 1149 SMART SM00387 893 1004 1.1E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS01095 728b65992073c54f68a29516999d4256 1149 Gene3D G3DSA:3.40.50.2300 1016 1149 1.4E-19 T 28-03-2018 APY29_RS01095 728b65992073c54f68a29516999d4256 1149 Pfam PF00072 Response regulator receiver domain 1031 1138 1.2E-10 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS01095 728b65992073c54f68a29516999d4256 1149 Gene3D G3DSA:3.30.565.10 844 1004 1.1E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS01095 728b65992073c54f68a29516999d4256 1149 SMART SM00448 1029 1140 1.4E-14 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS01095 728b65992073c54f68a29516999d4256 1149 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 636 759 1.0E-7 T 28-03-2018 IPR000014 PAS domain APY29_RS01095 728b65992073c54f68a29516999d4256 1149 SMART SM00091 637 706 0.0028 T 28-03-2018 IPR000014 PAS domain APY29_RS01095 728b65992073c54f68a29516999d4256 1149 SUPERFAMILY SSF47384 768 850 1.47E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS01095 728b65992073c54f68a29516999d4256 1149 SUPERFAMILY SSF55874 839 1002 2.1E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS12575 7fbf764b5c7d4656ce39ecf4779beb6c 372 Gene3D G3DSA:3.40.630.30 184 338 9.0E-33 T 28-03-2018 APY29_RS12575 7fbf764b5c7d4656ce39ecf4779beb6c 372 Gene3D G3DSA:3.40.630.30 6 183 3.1E-6 T 28-03-2018 APY29_RS12575 7fbf764b5c7d4656ce39ecf4779beb6c 372 SUPERFAMILY SSF55729 183 350 3.87E-36 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS12575 7fbf764b5c7d4656ce39ecf4779beb6c 372 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 11 371 3.5E-135 T 28-03-2018 IPR007434 Peptidogalycan biosysnthesis/recognition APY29_RS15165 cdd70d8196238b1cf4da24c1a512196c 467 SUPERFAMILY SSF56954 98 457 4.97E-45 T 28-03-2018 APY29_RS15165 cdd70d8196238b1cf4da24c1a512196c 467 SUPERFAMILY SSF56954 5 70 4.97E-45 T 28-03-2018 APY29_RS15165 cdd70d8196238b1cf4da24c1a512196c 467 Gene3D G3DSA:1.20.1600.10 15 459 4.2E-49 T 28-03-2018 APY29_RS15165 cdd70d8196238b1cf4da24c1a512196c 467 Pfam PF02321 Outer membrane efflux protein 283 457 1.0E-20 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS15165 cdd70d8196238b1cf4da24c1a512196c 467 Pfam PF02321 Outer membrane efflux protein 97 246 3.1E-9 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS14460 0a01957b67ddbd338a0c4603976a1131 338 SUPERFAMILY SSF53850 94 304 9.31E-41 T 28-03-2018 APY29_RS14460 0a01957b67ddbd338a0c4603976a1131 338 Gene3D G3DSA:3.40.190.10 97 184 1.2E-14 T 28-03-2018 APY29_RS14460 0a01957b67ddbd338a0c4603976a1131 338 Pfam PF03466 LysR substrate binding domain 93 300 3.3E-40 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS14460 0a01957b67ddbd338a0c4603976a1131 338 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 7.3E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS14460 0a01957b67ddbd338a0c4603976a1131 338 Gene3D G3DSA:1.10.10.10 4 89 9.7E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS14460 0a01957b67ddbd338a0c4603976a1131 338 SUPERFAMILY SSF46785 8 92 1.82E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS14460 0a01957b67ddbd338a0c4603976a1131 338 Gene3D G3DSA:3.40.190.10 185 271 6.3E-22 T 28-03-2018 APY29_RS12635 c3a5aeaf20b34a948bd07b7f00cac5fc 573 Gene3D G3DSA:3.30.70.270 21 175 2.0E-28 T 28-03-2018 APY29_RS12635 c3a5aeaf20b34a948bd07b7f00cac5fc 573 SUPERFAMILY SSF55073 27 169 2.2E-24 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS12635 c3a5aeaf20b34a948bd07b7f00cac5fc 573 SMART SM00267 11 168 1.0E-7 T 28-03-2018 IPR000160 GGDEF domain APY29_RS12635 c3a5aeaf20b34a948bd07b7f00cac5fc 573 Gene3D G3DSA:3.20.20.450 176 428 1.1E-87 T 28-03-2018 IPR001633 EAL domain APY29_RS12635 c3a5aeaf20b34a948bd07b7f00cac5fc 573 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 29 167 1.1E-15 T 28-03-2018 IPR000160 GGDEF domain APY29_RS12635 c3a5aeaf20b34a948bd07b7f00cac5fc 573 SMART SM00448 446 558 6.5E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS12635 c3a5aeaf20b34a948bd07b7f00cac5fc 573 SUPERFAMILY SSF141868 185 432 6.28E-81 T 28-03-2018 IPR001633 EAL domain APY29_RS12635 c3a5aeaf20b34a948bd07b7f00cac5fc 573 Pfam PF00990 Diguanylate cyclase, GGDEF domain 27 163 4.7E-19 T 28-03-2018 IPR000160 GGDEF domain APY29_RS12635 c3a5aeaf20b34a948bd07b7f00cac5fc 573 SUPERFAMILY SSF52172 445 567 2.56E-28 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS12635 c3a5aeaf20b34a948bd07b7f00cac5fc 573 Pfam PF00072 Response regulator receiver domain 449 559 1.1E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS12635 c3a5aeaf20b34a948bd07b7f00cac5fc 573 SMART SM00052 178 424 2.7E-97 T 28-03-2018 IPR001633 EAL domain APY29_RS12635 c3a5aeaf20b34a948bd07b7f00cac5fc 573 Gene3D G3DSA:3.40.50.2300 438 573 9.5E-28 T 28-03-2018 APY29_RS12635 c3a5aeaf20b34a948bd07b7f00cac5fc 573 Pfam PF00563 EAL domain 184 419 1.3E-70 T 28-03-2018 IPR001633 EAL domain APY29_RS22025 da1b5b6709277eef8da6a0f1badd9b95 336 SUPERFAMILY SSF51735 1 325 1.08E-66 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS22025 da1b5b6709277eef8da6a0f1badd9b95 336 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 4 251 1.1E-47 T 28-03-2018 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 APY29_RS22025 da1b5b6709277eef8da6a0f1badd9b95 336 Gene3D G3DSA:3.40.50.720 1 328 1.3E-61 T 28-03-2018 APY29_RS12970 73f22809c9f969155a6223bb5d49aab4 552 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 279 418 8.4E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS12970 73f22809c9f969155a6223bb5d49aab4 552 Gene3D G3DSA:1.10.287.560 171 232 1.2E-16 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 APY29_RS12970 73f22809c9f969155a6223bb5d49aab4 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 397 1.8E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS12970 73f22809c9f969155a6223bb5d49aab4 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 335 1.8E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS12970 73f22809c9f969155a6223bb5d49aab4 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 373 1.8E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS12970 73f22809c9f969155a6223bb5d49aab4 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 416 1.8E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS12970 73f22809c9f969155a6223bb5d49aab4 552 SUPERFAMILY SSF47384 172 232 4.32E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS12970 73f22809c9f969155a6223bb5d49aab4 552 Gene3D G3DSA:3.30.565.10 234 421 1.1E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS12970 73f22809c9f969155a6223bb5d49aab4 552 Pfam PF01584 CheW-like domain 425 547 3.0E-26 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS12970 73f22809c9f969155a6223bb5d49aab4 552 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 172 230 1.1E-11 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 APY29_RS12970 73f22809c9f969155a6223bb5d49aab4 552 SMART SM01231 171 231 2.8E-16 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 APY29_RS12970 73f22809c9f969155a6223bb5d49aab4 552 SMART SM00387 276 419 2.3E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS12970 73f22809c9f969155a6223bb5d49aab4 552 SUPERFAMILY SSF55874 234 417 1.19E-40 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS12970 73f22809c9f969155a6223bb5d49aab4 552 SMART SM00260 411 548 5.3E-30 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS12970 73f22809c9f969155a6223bb5d49aab4 552 Gene3D G3DSA:2.30.30.40 501 547 3.9E-19 T 28-03-2018 APY29_RS12970 73f22809c9f969155a6223bb5d49aab4 552 SMART SM00073 5 102 7.1E-16 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS12970 73f22809c9f969155a6223bb5d49aab4 552 Pfam PF01627 Hpt domain 9 103 1.2E-15 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS12970 73f22809c9f969155a6223bb5d49aab4 552 Gene3D G3DSA:2.40.50.180 431 500 5.8E-15 T 28-03-2018 APY29_RS12970 73f22809c9f969155a6223bb5d49aab4 552 SUPERFAMILY SSF47226 7 123 1.22E-27 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS12970 73f22809c9f969155a6223bb5d49aab4 552 Gene3D G3DSA:1.20.120.160 4 153 9.6E-28 T 28-03-2018 APY29_RS12970 73f22809c9f969155a6223bb5d49aab4 552 SUPERFAMILY SSF50341 418 547 3.92E-31 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS13640 6b13c2d4eb66a51a30bdfdaec568479c 234 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 196 206 - T 28-03-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS13640 6b13c2d4eb66a51a30bdfdaec568479c 234 Gene3D G3DSA:3.40.50.1860 122 218 1.7E-26 T 28-03-2018 APY29_RS13640 6b13c2d4eb66a51a30bdfdaec568479c 234 SUPERFAMILY SSF53681 108 218 2.78E-31 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS13640 6b13c2d4eb66a51a30bdfdaec568479c 234 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 227 5.9E-60 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS13640 6b13c2d4eb66a51a30bdfdaec568479c 234 TIGRFAM TIGR00035 asp_race: aspartate racemase 6 227 1.2E-65 T 28-03-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 APY29_RS13640 6b13c2d4eb66a51a30bdfdaec568479c 234 SUPERFAMILY SSF53681 6 120 1.77E-36 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS13640 6b13c2d4eb66a51a30bdfdaec568479c 234 Gene3D G3DSA:3.40.50.1860 4 121 4.3E-31 T 28-03-2018 APY29_RS15125 7152905be8012e9df2bd255970d10817 403 SUPERFAMILY SSF47005 118 161 3.14E-8 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 APY29_RS15125 7152905be8012e9df2bd255970d10817 403 SUPERFAMILY SSF52777 173 401 9.34E-88 T 28-03-2018 APY29_RS15125 7152905be8012e9df2bd255970d10817 403 SUPERFAMILY SSF51230 1 95 7.59E-26 T 28-03-2018 IPR011053 Single hybrid motif APY29_RS15125 7152905be8012e9df2bd255970d10817 403 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 402 3.7E-176 T 28-03-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 APY29_RS15125 7152905be8012e9df2bd255970d10817 403 Pfam PF02817 e3 binding domain 126 156 1.3E-6 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 APY29_RS15125 7152905be8012e9df2bd255970d10817 403 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 173 400 1.3E-82 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 APY29_RS15125 7152905be8012e9df2bd255970d10817 403 Gene3D G3DSA:3.30.559.10 165 401 6.2E-90 T 28-03-2018 APY29_RS15125 7152905be8012e9df2bd255970d10817 403 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 APY29_RS15125 7152905be8012e9df2bd255970d10817 403 Gene3D G3DSA:4.10.320.10 124 164 1.4E-8 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 APY29_RS15125 7152905be8012e9df2bd255970d10817 403 Pfam PF00364 Biotin-requiring enzyme 4 76 5.6E-19 T 28-03-2018 IPR000089 Biotin/lipoyl attachment APY29_RS15125 7152905be8012e9df2bd255970d10817 403 Gene3D G3DSA:3.90.1170.30 2 54 1.5E-11 T 28-03-2018 APY29_RS15125 7152905be8012e9df2bd255970d10817 403 Gene3D G3DSA:2.40.50.100 55 123 2.8E-8 T 28-03-2018 APY29_RS12290 ba64119c9a3e815ac6742fd52d11889b 86 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 6.5E-6 T 28-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 APY29_RS12290 ba64119c9a3e815ac6742fd52d11889b 86 SUPERFAMILY SSF89447 5 56 2.09E-5 T 28-03-2018 APY29_RS23405 ba64119c9a3e815ac6742fd52d11889b 86 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 6.5E-6 T 28-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 APY29_RS23405 ba64119c9a3e815ac6742fd52d11889b 86 SUPERFAMILY SSF89447 5 56 2.09E-5 T 28-03-2018 APY29_RS23490 58cdd2b34d6eae39b0a2921769307dfc 208 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 185 3.7E-18 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain APY29_RS23490 58cdd2b34d6eae39b0a2921769307dfc 208 Gene3D G3DSA:3.40.50.300 1 208 1.1E-36 T 28-03-2018 APY29_RS23490 58cdd2b34d6eae39b0a2921769307dfc 208 PIRSF PIRSF009320 1 208 2.2E-36 T 28-03-2018 APY29_RS23490 58cdd2b34d6eae39b0a2921769307dfc 208 SUPERFAMILY SSF52540 1 207 3.11E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS02795 966ce9380d63610c0e643329a6d112f2 470 Pfam PF12913 SH3 domain (SH3b1 type) 160 206 4.0E-18 T 28-03-2018 APY29_RS02795 966ce9380d63610c0e643329a6d112f2 470 PIRSF PIRSF019015 3 464 2.6E-72 T 28-03-2018 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type APY29_RS02795 966ce9380d63610c0e643329a6d112f2 470 SUPERFAMILY SSF54001 310 419 6.87E-18 T 28-03-2018 APY29_RS02795 966ce9380d63610c0e643329a6d112f2 470 Gene3D G3DSA:3.90.1720.10 309 468 3.7E-22 T 28-03-2018 APY29_RS02795 966ce9380d63610c0e643329a6d112f2 470 Pfam PF00877 NlpC/P60 family 326 417 8.0E-12 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain APY29_RS02795 966ce9380d63610c0e643329a6d112f2 470 Pfam PF12914 SH3 domain of SH3b2 type 218 264 1.5E-6 T 28-03-2018 IPR026864 SH3b2-type SH3 domain APY29_RS18860 218140897aa468d7afda6a20b89e9dea 403 Gene3D G3DSA:3.30.300.10 11 138 1.2E-43 T 28-03-2018 APY29_RS18860 218140897aa468d7afda6a20b89e9dea 403 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 400 56.211 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APY29_RS18860 218140897aa468d7afda6a20b89e9dea 403 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 233 5.8E-43 T 28-03-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APY29_RS18860 218140897aa468d7afda6a20b89e9dea 403 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 101 1.1E-41 T 28-03-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APY29_RS18860 218140897aa468d7afda6a20b89e9dea 403 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 370 1.3E-181 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APY29_RS18860 218140897aa468d7afda6a20b89e9dea 403 Gene3D G3DSA:3.30.300.10 261 402 6.4E-50 T 28-03-2018 APY29_RS18860 218140897aa468d7afda6a20b89e9dea 403 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 28-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APY29_RS18860 218140897aa468d7afda6a20b89e9dea 403 SUPERFAMILY SSF55973 3 109 5.89E-46 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APY29_RS18860 218140897aa468d7afda6a20b89e9dea 403 Gene3D G3DSA:3.30.300.10 139 260 3.9E-43 T 28-03-2018 APY29_RS18860 218140897aa468d7afda6a20b89e9dea 403 SUPERFAMILY SSF55973 110 234 3.92E-47 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APY29_RS18860 218140897aa468d7afda6a20b89e9dea 403 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 261 269 - T 28-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APY29_RS18860 218140897aa468d7afda6a20b89e9dea 403 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 235 371 3.6E-68 T 28-03-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APY29_RS18860 218140897aa468d7afda6a20b89e9dea 403 PIRSF PIRSF000497 1 401 6.7E-170 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APY29_RS18860 218140897aa468d7afda6a20b89e9dea 403 SUPERFAMILY SSF55973 235 401 2.28E-67 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APY29_RS02950 2823bb49be3094910c29cf37ff0ed30d 291 Pfam PF04545 Sigma-70, region 4 236 286 1.2E-14 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS02950 2823bb49be3094910c29cf37ff0ed30d 291 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 55 286 7.5E-31 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS02950 2823bb49be3094910c29cf37ff0ed30d 291 PIRSF PIRSF000770 16 291 2.5E-34 T 28-03-2018 APY29_RS02950 2823bb49be3094910c29cf37ff0ed30d 291 SUPERFAMILY SSF88946 22 129 4.24E-38 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS02950 2823bb49be3094910c29cf37ff0ed30d 291 Gene3D G3DSA:1.10.10.10 229 289 1.9E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS02950 2823bb49be3094910c29cf37ff0ed30d 291 Gene3D G3DSA:1.10.601.10 18 129 1.8E-34 T 28-03-2018 APY29_RS02950 2823bb49be3094910c29cf37ff0ed30d 291 SUPERFAMILY SSF88659 208 288 6.35E-16 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS02950 2823bb49be3094910c29cf37ff0ed30d 291 PRINTS PR00046 Major sigma-70 factor signature 84 97 3.3E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS02950 2823bb49be3094910c29cf37ff0ed30d 291 PRINTS PR00046 Major sigma-70 factor signature 239 251 3.3E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS02950 2823bb49be3094910c29cf37ff0ed30d 291 PRINTS PR00046 Major sigma-70 factor signature 259 274 3.3E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS02950 2823bb49be3094910c29cf37ff0ed30d 291 PRINTS PR00046 Major sigma-70 factor signature 274 285 3.3E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS02950 2823bb49be3094910c29cf37ff0ed30d 291 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 259 285 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS02950 2823bb49be3094910c29cf37ff0ed30d 291 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 8 291 54.057 T 28-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 APY29_RS02950 2823bb49be3094910c29cf37ff0ed30d 291 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 21 289 5.4E-126 T 28-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 APY29_RS02950 2823bb49be3094910c29cf37ff0ed30d 291 Pfam PF00140 Sigma-70 factor, region 1.2 22 53 3.4E-5 T 28-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS02950 2823bb49be3094910c29cf37ff0ed30d 291 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 84 97 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS02950 2823bb49be3094910c29cf37ff0ed30d 291 Pfam PF04542 Sigma-70 region 2 60 129 2.6E-16 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS14745 b913ca9bac4ad0b71f9a55a95c28e272 220 Pfam PF00484 Carbonic anhydrase 37 188 9.8E-50 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APY29_RS14745 b913ca9bac4ad0b71f9a55a95c28e272 220 SMART SM00947 30 193 1.6E-66 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APY29_RS14745 b913ca9bac4ad0b71f9a55a95c28e272 220 SUPERFAMILY SSF53056 1 212 9.03E-75 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APY29_RS14745 b913ca9bac4ad0b71f9a55a95c28e272 220 Gene3D G3DSA:3.40.1050.10 1 220 3.1E-70 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APY29_RS14745 b913ca9bac4ad0b71f9a55a95c28e272 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APY29_RS14745 b913ca9bac4ad0b71f9a55a95c28e272 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APY29_RS13840 9ec5d001a3919e446f6ec6d4007bf41e 323 Gene3D G3DSA:3.40.190.10 191 279 6.1E-16 T 28-03-2018 APY29_RS13840 9ec5d001a3919e446f6ec6d4007bf41e 323 Gene3D G3DSA:3.40.190.10 101 190 2.1E-17 T 28-03-2018 APY29_RS13840 9ec5d001a3919e446f6ec6d4007bf41e 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 52 1.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS13840 9ec5d001a3919e446f6ec6d4007bf41e 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 63 1.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS13840 9ec5d001a3919e446f6ec6d4007bf41e 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 42 1.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS13840 9ec5d001a3919e446f6ec6d4007bf41e 323 SUPERFAMILY SSF46785 11 124 6.09E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS13840 9ec5d001a3919e446f6ec6d4007bf41e 323 Gene3D G3DSA:1.10.10.10 9 96 3.5E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS13840 9ec5d001a3919e446f6ec6d4007bf41e 323 SUPERFAMILY SSF53850 107 313 1.12E-34 T 28-03-2018 APY29_RS13840 9ec5d001a3919e446f6ec6d4007bf41e 323 Pfam PF03466 LysR substrate binding domain 101 309 7.9E-33 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS13840 9ec5d001a3919e446f6ec6d4007bf41e 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 74 9.5E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS09130 cd12beb582a25a695fc437b78ad52108 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 8.2E-17 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APY29_RS09130 cd12beb582a25a695fc437b78ad52108 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 8.2E-17 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APY29_RS09130 cd12beb582a25a695fc437b78ad52108 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 8.2E-17 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APY29_RS09130 cd12beb582a25a695fc437b78ad52108 99 SMART SM00411 3 92 1.0E-42 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APY29_RS09130 cd12beb582a25a695fc437b78ad52108 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 APY29_RS09130 cd12beb582a25a695fc437b78ad52108 99 SUPERFAMILY SSF47729 3 92 1.91E-32 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APY29_RS09130 cd12beb582a25a695fc437b78ad52108 99 Gene3D G3DSA:4.10.520.10 1 98 5.0E-34 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APY29_RS09130 cd12beb582a25a695fc437b78ad52108 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 96 6.9E-48 T 28-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 APY29_RS09130 cd12beb582a25a695fc437b78ad52108 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 5.3E-32 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APY29_RS09130 cd12beb582a25a695fc437b78ad52108 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 29.832 T 28-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 APY29_RS20855 be8fdcdb818c636e458295c89c9539b1 162 SMART SM00347 40 140 3.7E-16 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS20855 be8fdcdb818c636e458295c89c9539b1 162 SUPERFAMILY SSF46785 9 152 1.01E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS20855 be8fdcdb818c636e458295c89c9539b1 162 Gene3D G3DSA:1.10.10.10 1 162 1.6E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS20855 be8fdcdb818c636e458295c89c9539b1 162 Pfam PF12802 MarR family 45 104 7.9E-12 T 28-03-2018 APY29_RS20855 be8fdcdb818c636e458295c89c9539b1 162 ProSitePatterns PS01117 MarR-type HTH domain signature. 79 113 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site APY29_RS20855 be8fdcdb818c636e458295c89c9539b1 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 96 1.6E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS20855 be8fdcdb818c636e458295c89c9539b1 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 100 116 1.6E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS20855 be8fdcdb818c636e458295c89c9539b1 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 130 150 1.6E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS20855 be8fdcdb818c636e458295c89c9539b1 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 80 1.6E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS10080 487ec3bd0e2682ec88bb679f9350cc5c 191 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 6 65 6.4E-28 T 28-03-2018 IPR012909 PHA accumulation regulator DNA-binding, N-terminal APY29_RS10080 487ec3bd0e2682ec88bb679f9350cc5c 191 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 5 111 4.1E-53 T 28-03-2018 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR GO:0006355 APY29_RS10080 487ec3bd0e2682ec88bb679f9350cc5c 191 Pfam PF05233 PHB accumulation regulatory domain 70 109 1.8E-18 T 28-03-2018 IPR007897 PHB accumulation regulatory APY29_RS03910 45af65f2c22603eece69f823f902e796 452 SUPERFAMILY SSF55874 320 450 1.2E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS03910 45af65f2c22603eece69f823f902e796 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 1.8E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS03910 45af65f2c22603eece69f823f902e796 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 449 1.8E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS03910 45af65f2c22603eece69f823f902e796 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 397 1.8E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS03910 45af65f2c22603eece69f823f902e796 452 SMART SM00387 342 452 1.5E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS03910 45af65f2c22603eece69f823f902e796 452 SUPERFAMILY SSF47384 235 309 2.55E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS03910 45af65f2c22603eece69f823f902e796 452 Gene3D G3DSA:1.10.287.130 240 305 2.5E-4 T 28-03-2018 APY29_RS03910 45af65f2c22603eece69f823f902e796 452 Gene3D G3DSA:3.30.450.20 111 239 6.4E-4 T 28-03-2018 APY29_RS03910 45af65f2c22603eece69f823f902e796 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 451 1.9E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS03910 45af65f2c22603eece69f823f902e796 452 Gene3D G3DSA:3.30.565.10 314 452 4.6E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS03070 01cbe1dc671cab42e8b5afddc1b097b8 307 SUPERFAMILY SSF53328 1 206 3.4E-63 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APY29_RS03070 01cbe1dc671cab42e8b5afddc1b097b8 307 Pfam PF00551 Formyl transferase 1 176 1.8E-42 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APY29_RS03070 01cbe1dc671cab42e8b5afddc1b097b8 307 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 301 9.7E-91 T 28-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 APY29_RS03070 01cbe1dc671cab42e8b5afddc1b097b8 307 Pfam PF02911 Formyl transferase, C-terminal domain 203 299 3.0E-27 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APY29_RS03070 01cbe1dc671cab42e8b5afddc1b097b8 307 Gene3D G3DSA:3.40.50.170 1 205 5.0E-67 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APY29_RS03070 01cbe1dc671cab42e8b5afddc1b097b8 307 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 131 154 - T 28-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APY29_RS03070 01cbe1dc671cab42e8b5afddc1b097b8 307 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 303 36.151 T 28-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 APY29_RS03070 01cbe1dc671cab42e8b5afddc1b097b8 307 SUPERFAMILY SSF50486 204 304 1.22E-30 T 28-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 APY29_RS03070 01cbe1dc671cab42e8b5afddc1b097b8 307 Gene3D G3DSA:3.10.25.10 206 305 1.7E-28 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 374 6.4E-14 T 28-03-2018 IPR000014 PAS domain APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 127 8.9E-16 T 28-03-2018 IPR000014 PAS domain APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 143 245 7.1E-12 T 28-03-2018 IPR000014 PAS domain APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 SUPERFAMILY SSF58104 374 625 1.05E-55 T 28-03-2018 APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 556 585 1.2E-37 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 508 537 1.2E-37 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 479 506 1.2E-37 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 402 431 1.2E-37 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 SUPERFAMILY SSF55785 264 365 5.8E-24 T 28-03-2018 IPR000014 PAS domain APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 SMART SM00086 326 368 1.2E-4 T 28-03-2018 IPR001610 PAC motif APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 SMART SM00086 82 124 0.8 T 28-03-2018 IPR001610 PAC motif APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 SMART SM00086 204 246 5.8E-5 T 28-03-2018 IPR001610 PAC motif APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 SMART SM00091 129 199 0.05 T 28-03-2018 IPR000014 PAS domain APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 SMART SM00091 9 76 0.042 T 28-03-2018 IPR000014 PAS domain APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 SMART SM00091 253 321 0.31 T 28-03-2018 IPR000014 PAS domain APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 441 592 6.2E-42 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 Gene3D G3DSA:3.40.50.10600 126 249 7.1E-34 T 28-03-2018 APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 Gene3D G3DSA:3.40.50.10600 6 125 3.9E-32 T 28-03-2018 APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 Gene3D G3DSA:3.40.50.10600 250 371 1.1E-31 T 28-03-2018 APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 SUPERFAMILY SSF55785 142 243 3.32E-25 T 28-03-2018 IPR000014 PAS domain APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 SUPERFAMILY SSF55785 20 121 2.27E-25 T 28-03-2018 IPR000014 PAS domain APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 Gene3D G3DSA:1.10.287.950 421 612 2.5E-37 T 28-03-2018 APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 Pfam PF08447 PAS fold 277 361 6.3E-13 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 Pfam PF08447 PAS fold 154 239 1.3E-15 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 Pfam PF08447 PAS fold 32 117 9.6E-12 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 APY29_RS13950 bbe3aa1deee762a9b69f02a71f9b7ec7 652 SMART SM00283 381 628 1.5E-59 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS18750 f73c47d0359c32f4ca8449c4fbcd96b2 423 Gene3D G3DSA:3.30.565.10 275 386 8.7E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS18750 f73c47d0359c32f4ca8449c4fbcd96b2 423 SUPERFAMILY SSF47384 197 275 3.14E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS18750 f73c47d0359c32f4ca8449c4fbcd96b2 423 SUPERFAMILY SSF55874 280 381 2.49E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS18750 f73c47d0359c32f4ca8449c4fbcd96b2 423 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 276 1.5E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS18750 f73c47d0359c32f4ca8449c4fbcd96b2 423 SMART SM00388 213 279 1.1E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS18750 f73c47d0359c32f4ca8449c4fbcd96b2 423 Gene3D G3DSA:1.10.287.130 194 274 4.1E-11 T 28-03-2018 APY29_RS18750 f73c47d0359c32f4ca8449c4fbcd96b2 423 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 374 1.8E-6 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 119 323 2.9E-62 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 Gene3D G3DSA:3.30.1360.40 794 891 4.6E-28 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 SUPERFAMILY SSF51230 1132 1203 3.14E-19 T 28-03-2018 IPR011053 Single hybrid motif APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 Gene3D G3DSA:3.30.470.20 212 444 6.1E-94 T 28-03-2018 APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 Gene3D G3DSA:3.30.1490.20 127 211 4.5E-20 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 Gene3D G3DSA:2.40.100.10 898 1060 1.1E-46 T 28-03-2018 IPR029000 Cyclophilin-like domain APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 2 1203 0.0 T 28-03-2018 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703 APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 SMART SM00797 473 771 3.8E-173 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 SUPERFAMILY SSF52440 1 115 7.91E-43 T 28-03-2018 IPR016185 Pre-ATP-grasp domain APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 474 754 9.1E-89 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 451 776 8.4E-100 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 SMART SM00796 810 1042 2.7E-107 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 Gene3D G3DSA:2.40.50.100 1133 1204 3.2E-16 T 28-03-2018 APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 155 169 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 Pfam PF02785 Biotin carboxylase C-terminal domain 338 442 1.6E-31 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 SUPERFAMILY SSF160467 812 904 1.7E-18 T 28-03-2018 APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 SUPERFAMILY SSF50891 927 1057 1.67E-25 T 28-03-2018 IPR029000 Cyclophilin-like domain APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 112 3.7E-40 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 Gene3D G3DSA:3.40.50.20 1 126 1.6E-46 T 28-03-2018 APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 SUPERFAMILY SSF56059 86 354 5.48E-68 T 28-03-2018 APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 SUPERFAMILY SSF51246 332 444 1.15E-33 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 Pfam PF00364 Biotin-requiring enzyme 1144 1203 5.7E-15 T 28-03-2018 IPR000089 Biotin/lipoyl attachment APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 SMART SM00878 338 442 2.7E-47 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1160 1177 - T 28-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 SUPERFAMILY SSF50891 635 761 4.17E-31 T 28-03-2018 IPR029000 Cyclophilin-like domain APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 289 296 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APY29_RS23110 6e7e2cf2c1f7de20ef873e8f81787024 1215 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 811 1028 4.6E-47 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D APY29_RS18980 226dfa8b55baba8847dbefb3bb43d80a 460 Gene3D G3DSA:3.20.20.80 33 325 1.8E-27 T 28-03-2018 APY29_RS18980 226dfa8b55baba8847dbefb3bb43d80a 460 SUPERFAMILY SSF51445 34 314 6.65E-39 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS18980 226dfa8b55baba8847dbefb3bb43d80a 460 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 99 179 2.9E-5 T 28-03-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 APY29_RS03855 9ee1aea77a856721ef80464f7215415f 266 PRINTS PR00123 ATP synthase A subunit signature 246 261 1.0E-12 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03855 9ee1aea77a856721ef80464f7215415f 266 PRINTS PR00123 ATP synthase A subunit signature 96 112 1.0E-12 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03855 9ee1aea77a856721ef80464f7215415f 266 PRINTS PR00123 ATP synthase A subunit signature 193 215 1.0E-12 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03855 9ee1aea77a856721ef80464f7215415f 266 Pfam PF00119 ATP synthase A chain 39 260 6.8E-55 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03855 9ee1aea77a856721ef80464f7215415f 266 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 32 260 5.5E-42 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03855 9ee1aea77a856721ef80464f7215415f 266 SUPERFAMILY SSF81336 88 260 5.49E-39 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03855 9ee1aea77a856721ef80464f7215415f 266 Gene3D G3DSA:1.20.120.220 87 266 2.3E-42 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03855 9ee1aea77a856721ef80464f7215415f 266 ProSitePatterns PS00449 ATP synthase a subunit signature. 196 205 - T 28-03-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03855 9ee1aea77a856721ef80464f7215415f 266 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 266 15.037 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS21360 a226b8d0f26ddca2a71b9ad981456c06 255 Pfam PF00106 short chain dehydrogenase 6 121 1.1E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS21360 a226b8d0f26ddca2a71b9ad981456c06 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 152 250 8.4E-15 T 28-03-2018 APY29_RS21360 a226b8d0f26ddca2a71b9ad981456c06 255 SUPERFAMILY SSF51735 5 252 9.39E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS21360 a226b8d0f26ddca2a71b9ad981456c06 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 104 120 2.6E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS21360 a226b8d0f26ddca2a71b9ad981456c06 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.6E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS21360 a226b8d0f26ddca2a71b9ad981456c06 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.6E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS21360 a226b8d0f26ddca2a71b9ad981456c06 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 2.6E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS21360 a226b8d0f26ddca2a71b9ad981456c06 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.6E-24 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS21360 a226b8d0f26ddca2a71b9ad981456c06 255 Gene3D G3DSA:3.40.50.720 1 253 5.9E-45 T 28-03-2018 APY29_RS11410 031d392186f35c4eff4e3908d76f7e8c 422 Gene3D G3DSA:2.40.110.10 143 237 1.3E-21 T 28-03-2018 APY29_RS11410 031d392186f35c4eff4e3908d76f7e8c 422 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 248 396 6.1E-24 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APY29_RS11410 031d392186f35c4eff4e3908d76f7e8c 422 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 144 235 2.2E-18 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 APY29_RS11410 031d392186f35c4eff4e3908d76f7e8c 422 SUPERFAMILY SSF47203 246 400 7.25E-32 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APY29_RS11410 031d392186f35c4eff4e3908d76f7e8c 422 SUPERFAMILY SSF56645 77 253 1.06E-27 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APY29_RS11410 031d392186f35c4eff4e3908d76f7e8c 422 Gene3D G3DSA:1.20.140.10 238 405 1.5E-32 T 28-03-2018 APY29_RS11410 031d392186f35c4eff4e3908d76f7e8c 422 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 146 158 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APY29_RS22120 901c077df7e8a114495b28b65988f95e 170 Hamap MF_00821 Protein-export protein SecB [secB]. 1 155 32.097 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APY29_RS22120 901c077df7e8a114495b28b65988f95e 170 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 107 129 1.4E-35 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APY29_RS22120 901c077df7e8a114495b28b65988f95e 170 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 23 40 1.4E-35 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APY29_RS22120 901c077df7e8a114495b28b65988f95e 170 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 83 103 1.4E-35 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APY29_RS22120 901c077df7e8a114495b28b65988f95e 170 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 133 151 1.4E-35 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APY29_RS22120 901c077df7e8a114495b28b65988f95e 170 SUPERFAMILY SSF54611 19 150 4.14E-47 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APY29_RS22120 901c077df7e8a114495b28b65988f95e 170 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 18 153 5.8E-48 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APY29_RS22120 901c077df7e8a114495b28b65988f95e 170 Pfam PF02556 Preprotein translocase subunit SecB 16 153 4.4E-53 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APY29_RS22120 901c077df7e8a114495b28b65988f95e 170 Gene3D G3DSA:3.10.420.10 12 162 4.2E-48 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APY29_RS08830 06036e3c8ccb1ee0f4f3ec6e25416a1c 130 SUPERFAMILY SSF89919 5 113 2.35E-30 T 28-03-2018 IPR023799 Ribosome-binding factor A domain APY29_RS08830 06036e3c8ccb1ee0f4f3ec6e25416a1c 130 Pfam PF02033 Ribosome-binding factor A 8 110 3.4E-30 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 APY29_RS08830 06036e3c8ccb1ee0f4f3ec6e25416a1c 130 Gene3D G3DSA:3.30.300.20 6 116 3.5E-32 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta APY29_RS08830 06036e3c8ccb1ee0f4f3ec6e25416a1c 130 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 4 117 21.03 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 APY29_RS08830 06036e3c8ccb1ee0f4f3ec6e25416a1c 130 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 97 3.0E-44 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 APY29_RS08830 06036e3c8ccb1ee0f4f3ec6e25416a1c 130 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 7 114 3.6E-30 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 APY29_RS08830 06036e3c8ccb1ee0f4f3ec6e25416a1c 130 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 28-03-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 APY29_RS08630 40601449d0afb5fc4d6e13a1a2dab944 357 SUPERFAMILY SSF51735 105 293 5.2E-59 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS08630 40601449d0afb5fc4d6e13a1a2dab944 357 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 153 181 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APY29_RS08630 40601449d0afb5fc4d6e13a1a2dab944 357 Gene3D G3DSA:3.40.50.720 6 117 2.7E-27 T 28-03-2018 APY29_RS08630 40601449d0afb5fc4d6e13a1a2dab944 357 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 292 1.4E-59 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APY29_RS08630 40601449d0afb5fc4d6e13a1a2dab944 357 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 319 4.8E-21 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 APY29_RS08630 40601449d0afb5fc4d6e13a1a2dab944 357 Gene3D G3DSA:3.40.50.720 118 295 1.1E-54 T 28-03-2018 APY29_RS08630 40601449d0afb5fc4d6e13a1a2dab944 357 SUPERFAMILY SSF52283 6 140 3.21E-31 T 28-03-2018 APY29_RS15140 0e09d92da8c7613df32aa5d3a54075c2 197 Gene3D G3DSA:3.30.230.30 1 125 1.1E-38 T 28-03-2018 IPR001498 Impact, N-terminal APY29_RS15140 0e09d92da8c7613df32aa5d3a54075c2 197 SUPERFAMILY SSF54980 128 193 1.37E-10 T 28-03-2018 IPR035647 EF-G domain III/V-like APY29_RS15140 0e09d92da8c7613df32aa5d3a54075c2 197 SUPERFAMILY SSF54211 6 120 4.17E-38 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS15140 0e09d92da8c7613df32aa5d3a54075c2 197 Gene3D G3DSA:3.30.70.240 127 191 3.5E-12 T 28-03-2018 APY29_RS15140 0e09d92da8c7613df32aa5d3a54075c2 197 Pfam PF01205 Uncharacterized protein family UPF0029 16 116 2.1E-28 T 28-03-2018 IPR001498 Impact, N-terminal APY29_RS15140 0e09d92da8c7613df32aa5d3a54075c2 197 Pfam PF09186 Domain of unknown function (DUF1949) 132 188 1.4E-8 T 28-03-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal APY29_RS15855 c106409a0d43045552eaea943e2e57fb 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 185 3.9E-28 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS15855 c106409a0d43045552eaea943e2e57fb 187 Gene3D G3DSA:1.10.10.10 95 187 8.9E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS15855 c106409a0d43045552eaea943e2e57fb 187 SUPERFAMILY SSF88659 122 186 6.35E-13 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS15855 c106409a0d43045552eaea943e2e57fb 187 Gene3D G3DSA:1.10.1740.10 15 94 1.2E-22 T 28-03-2018 APY29_RS15855 c106409a0d43045552eaea943e2e57fb 187 Pfam PF04542 Sigma-70 region 2 30 97 2.1E-15 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS15855 c106409a0d43045552eaea943e2e57fb 187 Pfam PF08281 Sigma-70, region 4 128 181 2.9E-12 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS15855 c106409a0d43045552eaea943e2e57fb 187 SUPERFAMILY SSF88946 7 106 1.29E-24 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS09580 8c80c7c384bc5c0c4258a547a1a29ba6 117 PRINTS PR01853 Bacterial YajC preprotein translocase signature 66 84 4.7E-13 T 28-03-2018 IPR003849 Preprotein translocase YajC APY29_RS09580 8c80c7c384bc5c0c4258a547a1a29ba6 117 PRINTS PR01853 Bacterial YajC preprotein translocase signature 28 48 4.7E-13 T 28-03-2018 IPR003849 Preprotein translocase YajC APY29_RS09580 8c80c7c384bc5c0c4258a547a1a29ba6 117 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 29 108 7.3E-27 T 28-03-2018 IPR003849 Preprotein translocase YajC APY29_RS09580 8c80c7c384bc5c0c4258a547a1a29ba6 117 SMART SM01323 26 108 3.5E-44 T 28-03-2018 IPR003849 Preprotein translocase YajC APY29_RS09580 8c80c7c384bc5c0c4258a547a1a29ba6 117 Pfam PF02699 Preprotein translocase subunit 31 104 2.3E-28 T 28-03-2018 IPR003849 Preprotein translocase YajC APY29_RS21170 f8975cbf603dbcb7e3561c26a4984e43 301 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 78 100 - T 28-03-2018 IPR030470 UbiA prenyltransferase conserved site APY29_RS21170 f8975cbf603dbcb7e3561c26a4984e43 301 Pfam PF01040 UbiA prenyltransferase family 39 283 3.9E-60 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 APY29_RS21170 f8975cbf603dbcb7e3561c26a4984e43 301 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 16 299 29.129 T 28-03-2018 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 APY29_RS21170 f8975cbf603dbcb7e3561c26a4984e43 301 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 23 297 1.6E-107 T 28-03-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 APY29_RS09040 4af5184bb551ade46cf9dad50c791987 313 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 2 226 6.1E-40 T 28-03-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 APY29_RS15540 59ebd261c617487947c1f5ff9ac654fd 505 SUPERFAMILY SSF56954 74 486 6.28E-103 T 28-03-2018 APY29_RS15540 59ebd261c617487947c1f5ff9ac654fd 505 SUPERFAMILY SSF56954 10 49 6.28E-103 T 28-03-2018 APY29_RS15540 59ebd261c617487947c1f5ff9ac654fd 505 Gene3D G3DSA:1.20.1600.10 41 490 1.7E-103 T 28-03-2018 APY29_RS15540 59ebd261c617487947c1f5ff9ac654fd 505 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 26 484 1.2E-160 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APY29_RS15540 59ebd261c617487947c1f5ff9ac654fd 505 Pfam PF02321 Outer membrane efflux protein 306 482 9.2E-25 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS15540 59ebd261c617487947c1f5ff9ac654fd 505 Pfam PF02321 Outer membrane efflux protein 83 273 4.9E-29 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS13865 fe01a4778f620ce6c508adc28cb99137 292 Gene3D G3DSA:3.30.420.40 1 158 0.0013 T 28-03-2018 APY29_RS13865 fe01a4778f620ce6c508adc28cb99137 292 Pfam PF05035 2-keto-3-deoxy-galactonokinase 5 284 1.0E-94 T 28-03-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 APY29_RS08565 2e92d7e1974988716120a37eee4fe217 168 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 26 57 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APY29_RS08565 2e92d7e1974988716120a37eee4fe217 168 PIRSF PIRSF006092 8 167 4.8E-49 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 APY29_RS08565 2e92d7e1974988716120a37eee4fe217 168 Hamap MF_00930 Transcription elongation factor GreB [greB]. 10 166 51.169 T 28-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 APY29_RS08565 2e92d7e1974988716120a37eee4fe217 168 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 91 165 1.7E-24 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APY29_RS08565 2e92d7e1974988716120a37eee4fe217 168 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 12 166 1.1E-60 T 28-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 APY29_RS08565 2e92d7e1974988716120a37eee4fe217 168 Hamap MF_00105 Transcription elongation factor GreA [greA]. 11 164 28.366 T 28-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 APY29_RS08565 2e92d7e1974988716120a37eee4fe217 168 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 129 145 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APY29_RS08565 2e92d7e1974988716120a37eee4fe217 168 Gene3D G3DSA:1.10.287.180 12 85 3.0E-27 T 28-03-2018 APY29_RS08565 2e92d7e1974988716120a37eee4fe217 168 SUPERFAMILY SSF54534 89 165 3.53E-21 T 28-03-2018 APY29_RS08565 2e92d7e1974988716120a37eee4fe217 168 SUPERFAMILY SSF46557 13 86 2.62E-24 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APY29_RS08565 2e92d7e1974988716120a37eee4fe217 168 Gene3D G3DSA:3.10.50.30 86 167 8.0E-24 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APY29_RS08565 2e92d7e1974988716120a37eee4fe217 168 Pfam PF03449 Transcription elongation factor, N-terminal 14 83 2.8E-25 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APY29_RS20435 0e1686f5ac9239b80acdcc7f6f90e4c0 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APY29_RS20435 0e1686f5ac9239b80acdcc7f6f90e4c0 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.8E-44 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 APY29_RS20435 0e1686f5ac9239b80acdcc7f6f90e4c0 455 Gene3D G3DSA:3.40.50.20 1 123 6.4E-52 T 28-03-2018 APY29_RS20435 0e1686f5ac9239b80acdcc7f6f90e4c0 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 2.5E-231 T 28-03-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 APY29_RS20435 0e1686f5ac9239b80acdcc7f6f90e4c0 455 SUPERFAMILY SSF52440 1 113 4.89E-47 T 28-03-2018 IPR016185 Pre-ATP-grasp domain APY29_RS20435 0e1686f5ac9239b80acdcc7f6f90e4c0 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 2.7E-81 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APY29_RS20435 0e1686f5ac9239b80acdcc7f6f90e4c0 455 SUPERFAMILY SSF56059 83 344 4.6E-67 T 28-03-2018 APY29_RS20435 0e1686f5ac9239b80acdcc7f6f90e4c0 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APY29_RS20435 0e1686f5ac9239b80acdcc7f6f90e4c0 455 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.3E-40 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 APY29_RS20435 0e1686f5ac9239b80acdcc7f6f90e4c0 455 SMART SM00878 336 441 7.0E-69 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 APY29_RS20435 0e1686f5ac9239b80acdcc7f6f90e4c0 455 Gene3D G3DSA:3.30.470.20 211 444 1.1E-97 T 28-03-2018 APY29_RS20435 0e1686f5ac9239b80acdcc7f6f90e4c0 455 SUPERFAMILY SSF51246 331 444 1.05E-44 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 APY29_RS20435 0e1686f5ac9239b80acdcc7f6f90e4c0 455 Gene3D G3DSA:3.30.1490.20 124 210 2.6E-21 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APY29_RS15430 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 PRINTS PR00050 Cold shock protein signature 29 38 5.3E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APY29_RS15430 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 PRINTS PR00050 Cold shock protein signature 9 24 5.3E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APY29_RS15430 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 PRINTS PR00050 Cold shock protein signature 44 62 5.3E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APY29_RS15430 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 Gene3D G3DSA:2.40.50.140 1 71 4.3E-27 T 28-03-2018 APY29_RS15430 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 SUPERFAMILY SSF50249 4 70 1.33E-23 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS15430 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 SMART SM00357 8 71 4.6E-28 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 APY29_RS15430 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 ProSitePatterns PS00352 'Cold-shock' domain signature. 20 38 - T 28-03-2018 IPR019844 Cold-shock conserved site APY29_RS15430 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 PIRSF PIRSF002599 2 71 8.8E-22 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 APY29_RS15430 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 Pfam PF00313 'Cold-shock' DNA-binding domain 8 70 1.9E-27 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APY29_RS13970 3cb4b72159ff284d11103c7b9bbb92d3 882 Pfam PF02272 DHHA1 domain 738 871 5.6E-25 T 28-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 APY29_RS13970 3cb4b72159ff284d11103c7b9bbb92d3 882 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 659 702 1.7E-17 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APY29_RS13970 3cb4b72159ff284d11103c7b9bbb92d3 882 SUPERFAMILY SSF50447 458 554 1.77E-16 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain APY29_RS13970 3cb4b72159ff284d11103c7b9bbb92d3 882 SUPERFAMILY SSF55186 558 715 3.4E-53 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 APY29_RS13970 3cb4b72159ff284d11103c7b9bbb92d3 882 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 881 195.136 T 28-03-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 APY29_RS13970 3cb4b72159ff284d11103c7b9bbb92d3 882 Gene3D G3DSA:3.30.980.10 559 719 2.7E-45 T 28-03-2018 APY29_RS13970 3cb4b72159ff284d11103c7b9bbb92d3 882 Pfam PF01411 tRNA synthetases class II (A) 11 562 2.9E-214 T 28-03-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 APY29_RS13970 3cb4b72159ff284d11103c7b9bbb92d3 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 211 222 4.0E-32 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 APY29_RS13970 3cb4b72159ff284d11103c7b9bbb92d3 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 238 251 4.0E-32 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 APY29_RS13970 3cb4b72159ff284d11103c7b9bbb92d3 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 284 300 4.0E-32 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 APY29_RS13970 3cb4b72159ff284d11103c7b9bbb92d3 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 308 321 4.0E-32 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 APY29_RS13970 3cb4b72159ff284d11103c7b9bbb92d3 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 80 91 4.0E-32 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 APY29_RS13970 3cb4b72159ff284d11103c7b9bbb92d3 882 SUPERFAMILY SSF101353 258 447 2.75E-59 T 28-03-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 APY29_RS13970 3cb4b72159ff284d11103c7b9bbb92d3 882 SMART SM00863 659 702 5.2E-22 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APY29_RS13970 3cb4b72159ff284d11103c7b9bbb92d3 882 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 12 860 0.0 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 APY29_RS13970 3cb4b72159ff284d11103c7b9bbb92d3 882 SUPERFAMILY SSF55681 7 257 7.95E-106 T 28-03-2018 APY29_RS13970 3cb4b72159ff284d11103c7b9bbb92d3 882 Gene3D G3DSA:3.30.930.10 6 254 2.9E-113 T 28-03-2018 APY29_RS11175 4d1563806870080c26961ed1a79ac462 259 Pfam PF02348 Cytidylyltransferase 11 230 2.9E-46 T 28-03-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 APY29_RS11175 4d1563806870080c26961ed1a79ac462 259 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 9 249 9.5E-78 T 28-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 APY29_RS11175 4d1563806870080c26961ed1a79ac462 259 SUPERFAMILY SSF53448 9 253 7.66E-58 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS11175 4d1563806870080c26961ed1a79ac462 259 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 7 257 38.611 T 28-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 APY29_RS11175 4d1563806870080c26961ed1a79ac462 259 Gene3D G3DSA:3.90.550.10 8 259 2.0E-46 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS07445 bcf496cb18742f4a7ab725b42f63d472 252 SUPERFAMILY SSF81901 17 211 9.16E-42 T 28-03-2018 APY29_RS07445 bcf496cb18742f4a7ab725b42f63d472 252 SMART SM00671 143 178 0.0018 T 28-03-2018 IPR006597 Sel1-like repeat APY29_RS07445 bcf496cb18742f4a7ab725b42f63d472 252 SMART SM00671 107 142 6.4E-7 T 28-03-2018 IPR006597 Sel1-like repeat APY29_RS07445 bcf496cb18742f4a7ab725b42f63d472 252 SMART SM00671 35 70 4.8E-6 T 28-03-2018 IPR006597 Sel1-like repeat APY29_RS07445 bcf496cb18742f4a7ab725b42f63d472 252 SMART SM00671 71 106 8.8E-8 T 28-03-2018 IPR006597 Sel1-like repeat APY29_RS07445 bcf496cb18742f4a7ab725b42f63d472 252 Pfam PF08238 Sel1 repeat 196 210 57.0 T 28-03-2018 IPR006597 Sel1-like repeat APY29_RS07445 bcf496cb18742f4a7ab725b42f63d472 252 Pfam PF08238 Sel1 repeat 71 105 5.1E-7 T 28-03-2018 IPR006597 Sel1-like repeat APY29_RS07445 bcf496cb18742f4a7ab725b42f63d472 252 Pfam PF08238 Sel1 repeat 143 178 0.0072 T 28-03-2018 IPR006597 Sel1-like repeat APY29_RS07445 bcf496cb18742f4a7ab725b42f63d472 252 Pfam PF08238 Sel1 repeat 110 142 9.4E-7 T 28-03-2018 IPR006597 Sel1-like repeat APY29_RS07445 bcf496cb18742f4a7ab725b42f63d472 252 Pfam PF08238 Sel1 repeat 37 69 9.2E-5 T 28-03-2018 IPR006597 Sel1-like repeat APY29_RS07445 bcf496cb18742f4a7ab725b42f63d472 252 Gene3D G3DSA:1.25.40.10 167 240 3.3E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS07445 bcf496cb18742f4a7ab725b42f63d472 252 Gene3D G3DSA:2.60.40.1180 119 166 2.4E-14 T 28-03-2018 APY29_RS07445 bcf496cb18742f4a7ab725b42f63d472 252 Gene3D G3DSA:2.60.40.1180 15 87 1.1E-17 T 28-03-2018 APY29_RS07445 bcf496cb18742f4a7ab725b42f63d472 252 Gene3D G3DSA:2.60.40.1180 88 118 1.5E-16 T 28-03-2018 APY29_RS19740 ed27cd6beaaa742083c17cb52a1d0c9c 591 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 90 311 2.7E-13 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APY29_RS19740 ed27cd6beaaa742083c17cb52a1d0c9c 591 SUPERFAMILY SSF48403 351 584 1.49E-51 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS19740 ed27cd6beaaa742083c17cb52a1d0c9c 591 PIRSF PIRSF000654 492 589 3.2E-12 T 28-03-2018 APY29_RS19740 ed27cd6beaaa742083c17cb52a1d0c9c 591 PIRSF PIRSF000654 429 502 5.4E-6 T 28-03-2018 APY29_RS19740 ed27cd6beaaa742083c17cb52a1d0c9c 591 PIRSF PIRSF000654 324 442 9.2E-8 T 28-03-2018 APY29_RS19740 ed27cd6beaaa742083c17cb52a1d0c9c 591 Gene3D G3DSA:3.40.190.10 82 182 0.0058 T 28-03-2018 APY29_RS19740 ed27cd6beaaa742083c17cb52a1d0c9c 591 Gene3D G3DSA:1.25.40.20 328 442 2.3E-19 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS19740 ed27cd6beaaa742083c17cb52a1d0c9c 591 Gene3D G3DSA:3.40.190.10 183 272 7.3E-5 T 28-03-2018 APY29_RS19740 ed27cd6beaaa742083c17cb52a1d0c9c 591 SUPERFAMILY SSF53850 84 311 1.81E-24 T 28-03-2018 APY29_RS19740 ed27cd6beaaa742083c17cb52a1d0c9c 591 Pfam PF13857 Ankyrin repeats (many copies) 417 471 1.1E-8 T 28-03-2018 APY29_RS19740 ed27cd6beaaa742083c17cb52a1d0c9c 591 Pfam PF13857 Ankyrin repeats (many copies) 517 570 7.2E-7 T 28-03-2018 APY29_RS19740 ed27cd6beaaa742083c17cb52a1d0c9c 591 SMART SM00248 529 558 0.023 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS19740 ed27cd6beaaa742083c17cb52a1d0c9c 591 SMART SM00248 463 492 0.0033 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS19740 ed27cd6beaaa742083c17cb52a1d0c9c 591 SMART SM00248 397 426 0.096 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS19740 ed27cd6beaaa742083c17cb52a1d0c9c 591 SMART SM00248 496 525 19.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS19740 ed27cd6beaaa742083c17cb52a1d0c9c 591 SMART SM00248 430 459 16.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS19740 ed27cd6beaaa742083c17cb52a1d0c9c 591 SMART SM00062 87 315 2.7E-18 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APY29_RS19740 ed27cd6beaaa742083c17cb52a1d0c9c 591 Gene3D G3DSA:1.25.40.20 443 502 1.1E-17 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS19740 ed27cd6beaaa742083c17cb52a1d0c9c 591 TIGRFAM TIGR03871 ABC_peri_MoxJ_2: quinoprotein dehydrogenase-associated probable ABC transporter substrate-binding protein 88 316 1.4E-79 T 28-03-2018 IPR022448 Quinoprotein dehydrogenase-associated APY29_RS19740 ed27cd6beaaa742083c17cb52a1d0c9c 591 Gene3D G3DSA:1.25.40.20 503 591 3.3E-22 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS13345 46c22c15e3f05150ab8007ab81aed685 238 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 120 2.8E-23 T 28-03-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 APY29_RS13345 46c22c15e3f05150ab8007ab81aed685 238 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 144 161 - T 28-03-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 APY29_RS13345 46c22c15e3f05150ab8007ab81aed685 238 Gene3D G3DSA:3.40.50.720 3 135 1.1E-19 T 28-03-2018 APY29_RS13345 46c22c15e3f05150ab8007ab81aed685 238 Gene3D G3DSA:3.30.360.10 136 207 2.7E-25 T 28-03-2018 APY29_RS13345 46c22c15e3f05150ab8007ab81aed685 238 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 167 2.9E-39 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 APY29_RS13345 46c22c15e3f05150ab8007ab81aed685 238 SUPERFAMILY SSF55347 122 209 1.79E-22 T 28-03-2018 APY29_RS13345 46c22c15e3f05150ab8007ab81aed685 238 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 238 28.25 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 APY29_RS13345 46c22c15e3f05150ab8007ab81aed685 238 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 123 236 1.6E-31 T 28-03-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 APY29_RS13345 46c22c15e3f05150ab8007ab81aed685 238 SUPERFAMILY SSF51735 5 121 2.36E-31 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS13345 46c22c15e3f05150ab8007ab81aed685 238 SUPERFAMILY SSF51735 209 237 2.36E-31 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS13345 46c22c15e3f05150ab8007ab81aed685 238 PIRSF PIRSF000161 4 238 1.8E-70 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 APY29_RS07585 f9d14b347377162e6304d004516b084c 144 Pfam PF02566 OsmC-like protein 42 138 6.7E-22 T 28-03-2018 IPR003718 OsmC/Ohr family APY29_RS07585 f9d14b347377162e6304d004516b084c 144 Gene3D G3DSA:3.30.300.20 3 144 9.4E-33 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta APY29_RS07585 f9d14b347377162e6304d004516b084c 144 SUPERFAMILY SSF82784 2 140 5.1E-37 T 28-03-2018 IPR003718 OsmC/Ohr family APY29_RS07585 f9d14b347377162e6304d004516b084c 144 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 139 1.1E-57 T 28-03-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 APY29_RS12585 657812e0b762a9525edae75ee3d43004 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 5.0E-37 T 28-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 APY29_RS12585 657812e0b762a9525edae75ee3d43004 72 SUPERFAMILY SSF50249 1 70 4.86E-28 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS12585 657812e0b762a9525edae75ee3d43004 72 SMART SM00316 4 72 3.3E-5 T 28-03-2018 IPR022967 RNA-binding domain, S1 APY29_RS12585 657812e0b762a9525edae75ee3d43004 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 2.4E-28 T 28-03-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 APY29_RS12585 657812e0b762a9525edae75ee3d43004 72 Gene3D G3DSA:2.40.50.140 1 72 4.0E-37 T 28-03-2018 APY29_RS12585 657812e0b762a9525edae75ee3d43004 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.423 T 28-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 APY29_RS05000 cdff84e2ac5d0bdcb553a0a427f09a8a 333 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 8 166 1.1E-69 T 28-03-2018 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 APY29_RS05000 cdff84e2ac5d0bdcb553a0a427f09a8a 333 PIRSF PIRSF000116 3 199 8.0E-40 T 28-03-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 APY29_RS05000 cdff84e2ac5d0bdcb553a0a427f09a8a 333 PIRSF PIRSF000116 191 321 6.5E-13 T 28-03-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 APY29_RS05000 cdff84e2ac5d0bdcb553a0a427f09a8a 333 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 8 316 4.8E-126 T 28-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 APY29_RS05000 cdff84e2ac5d0bdcb553a0a427f09a8a 333 Gene3D G3DSA:1.10.1040.10 52 320 2.9E-109 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APY29_RS05000 cdff84e2ac5d0bdcb553a0a427f09a8a 333 Gene3D G3DSA:3.40.50.720 1 37 0.0059 T 28-03-2018 APY29_RS05000 cdff84e2ac5d0bdcb553a0a427f09a8a 333 SUPERFAMILY SSF48179 173 320 9.86E-67 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APY29_RS05000 cdff84e2ac5d0bdcb553a0a427f09a8a 333 SUPERFAMILY SSF51735 7 172 2.1E-63 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS05000 cdff84e2ac5d0bdcb553a0a427f09a8a 333 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 173 316 1.4E-61 T 28-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 APY29_RS05000 cdff84e2ac5d0bdcb553a0a427f09a8a 333 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 318 41.622 T 28-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 APY29_RS02515 b69c3043bcc80bd6dc51cd5af3ad9952 562 Gene3D G3DSA:3.30.1360.70 1 112 8.0E-31 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 APY29_RS02515 b69c3043bcc80bd6dc51cd5af3ad9952 562 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 562 25.613 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 APY29_RS02515 b69c3043bcc80bd6dc51cd5af3ad9952 562 Pfam PF05746 DALR anticodon binding domain 441 562 7.9E-36 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APY29_RS02515 b69c3043bcc80bd6dc51cd5af3ad9952 562 Gene3D G3DSA:1.10.730.10 417 562 2.7E-47 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS02515 b69c3043bcc80bd6dc51cd5af3ad9952 562 Gene3D G3DSA:3.40.50.620 118 333 5.7E-42 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS02515 b69c3043bcc80bd6dc51cd5af3ad9952 562 SUPERFAMILY SSF52374 117 452 4.22E-89 T 28-03-2018 APY29_RS02515 b69c3043bcc80bd6dc51cd5af3ad9952 562 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 131 140 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS02515 b69c3043bcc80bd6dc51cd5af3ad9952 562 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 6 92 9.2E-25 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 APY29_RS02515 b69c3043bcc80bd6dc51cd5af3ad9952 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 160 173 1.9E-22 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 APY29_RS02515 b69c3043bcc80bd6dc51cd5af3ad9952 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 136 152 1.9E-22 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 APY29_RS02515 b69c3043bcc80bd6dc51cd5af3ad9952 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 121 136 1.9E-22 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 APY29_RS02515 b69c3043bcc80bd6dc51cd5af3ad9952 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 308 329 1.9E-22 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 APY29_RS02515 b69c3043bcc80bd6dc51cd5af3ad9952 562 SUPERFAMILY SSF55190 4 112 6.8E-27 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 APY29_RS02515 b69c3043bcc80bd6dc51cd5af3ad9952 562 SUPERFAMILY SSF47323 436 562 5.89E-35 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS02515 b69c3043bcc80bd6dc51cd5af3ad9952 562 Pfam PF00750 tRNA synthetases class I (R) 103 410 1.4E-24 T 28-03-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 APY29_RS02515 b69c3043bcc80bd6dc51cd5af3ad9952 562 SMART SM01016 3 92 2.1E-38 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 APY29_RS02515 b69c3043bcc80bd6dc51cd5af3ad9952 562 Gene3D G3DSA:3.40.50.620 334 416 2.6E-14 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS02515 b69c3043bcc80bd6dc51cd5af3ad9952 562 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 28 562 3.7E-127 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 APY29_RS02515 b69c3043bcc80bd6dc51cd5af3ad9952 562 SMART SM00836 441 562 3.2E-54 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APY29_RS23105 ff5c790c73ea5e75209e4bd0bf117a79 525 Gene3D G3DSA:2.160.20.10 24 525 2.3E-25 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS23105 ff5c790c73ea5e75209e4bd0bf117a79 525 SUPERFAMILY SSF51126 469 524 1.91E-21 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS23105 ff5c790c73ea5e75209e4bd0bf117a79 525 SUPERFAMILY SSF51126 259 418 1.91E-21 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS23105 ff5c790c73ea5e75209e4bd0bf117a79 525 SUPERFAMILY SSF51126 42 225 1.91E-21 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS19440 674bf23b424becc19a0ae43beeacba3a 964 SUPERFAMILY SSF49785 51 225 2.43E-39 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS19440 674bf23b424becc19a0ae43beeacba3a 964 Gene3D G3DSA:3.20.20.80 341 545 1.3E-33 T 28-03-2018 APY29_RS19440 674bf23b424becc19a0ae43beeacba3a 964 Gene3D G3DSA:3.20.20.80 546 626 1.7E-12 T 28-03-2018 APY29_RS19440 674bf23b424becc19a0ae43beeacba3a 964 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 439 453 - T 28-03-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 APY29_RS19440 674bf23b424becc19a0ae43beeacba3a 964 Pfam PF00703 Glycosyl hydrolases family 2 245 339 9.8E-12 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APY29_RS19440 674bf23b424becc19a0ae43beeacba3a 964 Gene3D G3DSA:2.60.120.260 51 224 5.5E-33 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS19440 674bf23b424becc19a0ae43beeacba3a 964 SUPERFAMILY SSF51445 344 622 4.32E-65 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS19440 674bf23b424becc19a0ae43beeacba3a 964 Gene3D G3DSA:2.60.40.10 629 706 3.2E-24 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS19440 674bf23b424becc19a0ae43beeacba3a 964 Pfam PF16355 Domain of unknown function (DUF4982) 642 700 2.3E-17 T 28-03-2018 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APY29_RS19440 674bf23b424becc19a0ae43beeacba3a 964 SUPERFAMILY SSF49303 246 339 4.89E-14 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APY29_RS19440 674bf23b424becc19a0ae43beeacba3a 964 Gene3D G3DSA:2.60.40.10 225 340 2.1E-17 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS19440 674bf23b424becc19a0ae43beeacba3a 964 Gene3D G3DSA:2.60.120.260 803 958 1.3E-4 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS19440 674bf23b424becc19a0ae43beeacba3a 964 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 100 223 3.3E-15 T 28-03-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APY29_RS19440 674bf23b424becc19a0ae43beeacba3a 964 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 346 511 8.8E-19 T 28-03-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 APY29_RS19440 674bf23b424becc19a0ae43beeacba3a 964 Gene3D G3DSA:2.60.40.10 707 802 5.1E-9 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS06515 d66f6ac6ff87e48f67ef1bf5057ee57f 299 SUPERFAMILY SSF56281 1 299 2.32E-52 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS06515 d66f6ac6ff87e48f67ef1bf5057ee57f 299 Gene3D G3DSA:3.60.15.10 1 299 1.3E-39 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS06515 d66f6ac6ff87e48f67ef1bf5057ee57f 299 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 299 145.503 T 28-03-2018 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 APY29_RS06515 d66f6ac6ff87e48f67ef1bf5057ee57f 299 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 2 299 3.5E-134 T 28-03-2018 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 APY29_RS06515 d66f6ac6ff87e48f67ef1bf5057ee57f 299 Pfam PF12706 Beta-lactamase superfamily domain 50 265 1.2E-51 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS12495 bb35dfd7146ae62882976419eafad984 212 Gene3D G3DSA:1.25.40.10 42 194 7.0E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS12495 bb35dfd7146ae62882976419eafad984 212 Pfam PF09976 Tetratricopeptide repeat-like domain 17 202 2.0E-37 T 28-03-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 APY29_RS12495 bb35dfd7146ae62882976419eafad984 212 SUPERFAMILY SSF48452 94 183 4.88E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 SMART SM01096 425 547 8.0E-72 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 Gene3D G3DSA:3.30.470.20 745 939 3.4E-41 T 28-03-2018 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 Gene3D G3DSA:3.30.470.20 119 403 1.8E-65 T 28-03-2018 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1073 13.505 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 SUPERFAMILY SSF52335 941 1076 8.63E-40 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 Pfam PF02142 MGS-like domain 962 1047 1.9E-19 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 SUPERFAMILY SSF56059 673 938 9.72E-103 T 28-03-2018 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 881 3.3E-38 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 4.9E-70 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 Gene3D G3DSA:3.40.50.1380 940 1077 1.8E-34 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 Gene3D G3DSA:3.40.50.20 4 115 1.6E-37 T 28-03-2018 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 SUPERFAMILY SSF52440 556 675 1.37E-49 T 28-03-2018 IPR016185 Pre-ATP-grasp domain APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 SUPERFAMILY SSF52440 1 127 2.59E-49 T 28-03-2018 IPR016185 Pre-ATP-grasp domain APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 428 547 1.1E-39 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1058 0.0 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 SUPERFAMILY SSF48108 396 554 7.06E-50 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 Gene3D G3DSA:3.30.1490.20 655 744 2.2E-24 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 SUPERFAMILY SSF56059 128 401 1.56E-107 T 28-03-2018 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1067 13.282 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 844 851 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 7.1E-65 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 7.1E-65 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 7.1E-65 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 7.1E-65 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 7.1E-65 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 7.1E-65 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 7.1E-65 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 Gene3D G3DSA:1.10.1030.10 409 538 1.8E-49 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 SMART SM00851 961 1047 1.0E-32 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain APY29_RS13330 da0570955f2b8e6dab17248a8bb9abe5 1079 Gene3D G3DSA:3.40.50.20 539 654 2.0E-61 T 28-03-2018 APY29_RS21630 e196b3ce2159ddf4a90be51fd3535dcf 326 Gene3D G3DSA:3.10.20.30 226 326 2.9E-20 T 28-03-2018 IPR012675 Beta-grasp domain APY29_RS21630 e196b3ce2159ddf4a90be51fd3535dcf 326 Gene3D G3DSA:3.40.50.80 104 225 1.4E-18 T 28-03-2018 APY29_RS21630 e196b3ce2159ddf4a90be51fd3535dcf 326 Pfam PF00970 Oxidoreductase FAD-binding domain 37 103 1.2E-4 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 APY29_RS21630 e196b3ce2159ddf4a90be51fd3535dcf 326 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 275 283 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APY29_RS21630 e196b3ce2159ddf4a90be51fd3535dcf 326 SUPERFAMILY SSF52343 102 231 7.46E-26 T 28-03-2018 APY29_RS21630 e196b3ce2159ddf4a90be51fd3535dcf 326 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 248 316 4.4E-9 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APY29_RS21630 e196b3ce2159ddf4a90be51fd3535dcf 326 Gene3D G3DSA:2.40.30.10 3 103 2.6E-17 T 28-03-2018 APY29_RS21630 e196b3ce2159ddf4a90be51fd3535dcf 326 SUPERFAMILY SSF54292 216 326 1.97E-27 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APY29_RS21630 e196b3ce2159ddf4a90be51fd3535dcf 326 SUPERFAMILY SSF63380 8 104 6.66E-25 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APY29_RS21630 e196b3ce2159ddf4a90be51fd3535dcf 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 34 44 1.0E-35 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 APY29_RS21630 e196b3ce2159ddf4a90be51fd3535dcf 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 80 94 1.0E-35 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 APY29_RS21630 e196b3ce2159ddf4a90be51fd3535dcf 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 56 70 1.0E-35 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 APY29_RS21630 e196b3ce2159ddf4a90be51fd3535dcf 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 44 56 1.0E-35 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 APY29_RS21630 e196b3ce2159ddf4a90be51fd3535dcf 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 140 149 1.0E-35 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 APY29_RS21630 e196b3ce2159ddf4a90be51fd3535dcf 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 115 134 1.0E-35 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 APY29_RS21630 e196b3ce2159ddf4a90be51fd3535dcf 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 194 202 1.0E-35 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 APY29_RS14565 8bd50ec5013d170419c5b97e60977ad6 242 Gene3D G3DSA:1.20.120.330 26 218 1.3E-5 T 28-03-2018 APY29_RS21735 313b4b675c00cb841f24de23fc7b79c8 997 Pfam PF00593 TonB dependent receptor 366 995 4.1E-6 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS21735 313b4b675c00cb841f24de23fc7b79c8 997 Pfam PF07715 TonB-dependent Receptor Plug Domain 130 235 1.9E-10 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS21735 313b4b675c00cb841f24de23fc7b79c8 997 Gene3D G3DSA:2.60.40.1120 27 108 2.5E-5 T 28-03-2018 APY29_RS21735 313b4b675c00cb841f24de23fc7b79c8 997 Gene3D G3DSA:2.40.170.20 280 996 3.3E-54 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS21735 313b4b675c00cb841f24de23fc7b79c8 997 Gene3D G3DSA:2.170.130.10 109 248 1.2E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS21735 313b4b675c00cb841f24de23fc7b79c8 997 Pfam PF13620 Carboxypeptidase regulatory-like domain 38 106 1.2E-7 T 28-03-2018 APY29_RS21735 313b4b675c00cb841f24de23fc7b79c8 997 SUPERFAMILY SSF56935 682 726 1.28E-67 T 28-03-2018 APY29_RS21735 313b4b675c00cb841f24de23fc7b79c8 997 SUPERFAMILY SSF56935 921 997 1.28E-67 T 28-03-2018 APY29_RS21735 313b4b675c00cb841f24de23fc7b79c8 997 SUPERFAMILY SSF56935 108 631 1.28E-67 T 28-03-2018 APY29_RS21735 313b4b675c00cb841f24de23fc7b79c8 997 SUPERFAMILY SSF56935 770 892 1.28E-67 T 28-03-2018 APY29_RS21735 313b4b675c00cb841f24de23fc7b79c8 997 SUPERFAMILY SSF49452 28 106 6.28E-5 T 28-03-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 APY29_RS19950 501d2dcbbf048d0dc8c9e3c0a6995d20 309 Pfam PF01590 GAF domain 27 153 2.5E-7 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS19950 501d2dcbbf048d0dc8c9e3c0a6995d20 309 SUPERFAMILY SSF55781 26 169 2.33E-22 T 28-03-2018 IPR029016 GAF domain-like APY29_RS19950 501d2dcbbf048d0dc8c9e3c0a6995d20 309 SMART SM00065 25 168 8.9E-5 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS19950 501d2dcbbf048d0dc8c9e3c0a6995d20 309 Gene3D G3DSA:3.30.450.40 23 151 5.9E-17 T 28-03-2018 IPR029016 GAF domain-like APY29_RS19950 501d2dcbbf048d0dc8c9e3c0a6995d20 309 Gene3D G3DSA:3.30.70.270 152 309 9.9E-4 T 28-03-2018 APY29_RS05575 9d79f3e75870cd4821659a80a47312a8 400 Gene3D G3DSA:3.30.950.10 258 388 7.7E-41 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 APY29_RS05575 9d79f3e75870cd4821659a80a47312a8 400 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 135 344 7.4E-51 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 APY29_RS05575 9d79f3e75870cd4821659a80a47312a8 400 Gene3D G3DSA:3.40.50.720 3 116 3.7E-7 T 28-03-2018 APY29_RS05575 9d79f3e75870cd4821659a80a47312a8 400 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 133 368 4.3E-90 T 28-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 APY29_RS05575 9d79f3e75870cd4821659a80a47312a8 400 Gene3D G3DSA:3.40.1010.10 133 257 6.6E-38 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 APY29_RS05575 9d79f3e75870cd4821659a80a47312a8 400 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 5 109 9.8E-19 T 28-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 APY29_RS05575 9d79f3e75870cd4821659a80a47312a8 400 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 213 246 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 APY29_RS05575 9d79f3e75870cd4821659a80a47312a8 400 PIRSF PIRSF036426 2 131 3.0E-26 T 28-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 APY29_RS05575 9d79f3e75870cd4821659a80a47312a8 400 PIRSF PIRSF036426 126 385 7.4E-124 T 28-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 APY29_RS05575 9d79f3e75870cd4821659a80a47312a8 400 Pfam PF13241 Putative NAD(P)-binding 8 108 1.4E-7 T 28-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 APY29_RS05575 9d79f3e75870cd4821659a80a47312a8 400 SUPERFAMILY SSF53790 130 377 1.44E-77 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 APY29_RS05575 9d79f3e75870cd4821659a80a47312a8 400 SUPERFAMILY SSF51735 5 104 9.45E-11 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 SUPERFAMILY SSF47226 734 844 1.31E-22 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 Gene3D G3DSA:1.20.120.160 1642 1784 3.9E-22 T 28-03-2018 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 SMART SM00387 1992 2133 1.9E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1996 2132 1.3E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 Gene3D G3DSA:1.20.120.160 891 1023 8.7E-10 T 28-03-2018 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 Pfam PF01627 Hpt domain 899 988 1.0E-5 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 Pfam PF01627 Hpt domain 13 111 8.7E-7 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 Pfam PF01627 Hpt domain 738 827 4.5E-12 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 Pfam PF01627 Hpt domain 1645 1738 8.4E-15 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 1811 1946 2.4E-5 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 Pfam PF00072 Response regulator receiver domain 2288 2398 5.0E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2117 2130 3.1E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2037 2051 3.1E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2093 2111 3.1E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 Gene3D G3DSA:2.30.30.40 2199 2263 3.4E-18 T 28-03-2018 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 Pfam PF01584 CheW-like domain 2137 2265 7.8E-20 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 SUPERFAMILY SSF47226 294 412 2.44E-9 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 SUPERFAMILY SSF47226 1643 1759 3.79E-23 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 SMART SM00073 1642 1740 1.3E-15 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 SMART SM00073 735 832 1.6E-4 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 SMART SM00448 2286 2399 2.0E-33 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 SUPERFAMILY SSF55874 1949 2130 7.2E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 SMART SM00260 2125 2263 1.9E-22 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 SUPERFAMILY SSF50341 2132 2262 2.22E-23 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 SMART SM01231 1809 1947 1.6E-11 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 SUPERFAMILY SSF52172 2288 2405 9.68E-34 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 Gene3D G3DSA:3.30.565.10 1947 2134 6.2E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 Gene3D G3DSA:1.10.287.560 1809 1946 2.8E-11 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 Gene3D G3DSA:1.20.120.160 731 884 7.3E-23 T 28-03-2018 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 Gene3D G3DSA:1.20.120.160 286 471 3.2E-13 T 28-03-2018 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 Gene3D G3DSA:1.20.120.160 15 139 4.5E-11 T 28-03-2018 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 SUPERFAMILY SSF47226 13 133 3.53E-18 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 SUPERFAMILY SSF47226 896 1017 1.96E-14 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS06600 ad89455b311bfe688d8dd1dba6c5b969 2409 Gene3D G3DSA:3.40.50.2300 2277 2408 2.5E-34 T 28-03-2018 APY29_RS15155 f24da3247402355f2ad5d800291e384c 562 Gene3D G3DSA:3.40.50.300 369 554 5.1E-8 T 28-03-2018 APY29_RS15155 f24da3247402355f2ad5d800291e384c 562 SUPERFAMILY SSF52540 374 528 2.94E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS15155 f24da3247402355f2ad5d800291e384c 562 SUPERFAMILY SSF90123 14 325 2.49E-32 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS15155 f24da3247402355f2ad5d800291e384c 562 Gene3D G3DSA:1.20.1560.10 10 327 7.1E-19 T 28-03-2018 APY29_RS09590 11ddf01f19aa8710552ed28b24edf55c 322 Pfam PF02355 Protein export membrane protein 127 296 1.4E-47 T 28-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial APY29_RS09590 11ddf01f19aa8710552ed28b24edf55c 322 Pfam PF07549 SecD/SecF GG Motif 38 64 1.7E-7 T 28-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site APY29_RS09590 11ddf01f19aa8710552ed28b24edf55c 322 SUPERFAMILY SSF82866 78 297 7.98E-35 T 28-03-2018 APY29_RS09590 11ddf01f19aa8710552ed28b24edf55c 322 Gene3D G3DSA:1.20.1640.10 98 300 4.1E-26 T 28-03-2018 APY29_RS09590 11ddf01f19aa8710552ed28b24edf55c 322 PRINTS PR01755 Bacterial translocase SecF protein signature 240 255 2.3E-27 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APY29_RS09590 11ddf01f19aa8710552ed28b24edf55c 322 PRINTS PR01755 Bacterial translocase SecF protein signature 161 175 2.3E-27 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APY29_RS09590 11ddf01f19aa8710552ed28b24edf55c 322 PRINTS PR01755 Bacterial translocase SecF protein signature 209 227 2.3E-27 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APY29_RS09590 11ddf01f19aa8710552ed28b24edf55c 322 PRINTS PR01755 Bacterial translocase SecF protein signature 42 57 2.3E-27 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APY29_RS09590 11ddf01f19aa8710552ed28b24edf55c 322 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 43 292 7.3E-63 T 28-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 APY29_RS09590 11ddf01f19aa8710552ed28b24edf55c 322 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 15 303 26.239 T 28-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 APY29_RS09590 11ddf01f19aa8710552ed28b24edf55c 322 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 81 289 1.8E-45 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APY29_RS12945 9cb9edc2c05398d4c5a39c2ddd7be51c 566 SUPERFAMILY SSF52540 354 543 1.61E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS12945 9cb9edc2c05398d4c5a39c2ddd7be51c 566 Gene3D G3DSA:3.40.50.300 354 548 1.3E-30 T 28-03-2018 APY29_RS12945 9cb9edc2c05398d4c5a39c2ddd7be51c 566 Pfam PF00448 SRP54-type protein, GTPase domain 359 546 6.5E-38 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 APY29_RS12945 9cb9edc2c05398d4c5a39c2ddd7be51c 566 SMART SM00382 356 550 9.2E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS12945 9cb9edc2c05398d4c5a39c2ddd7be51c 566 SMART SM00962 357 548 4.2E-56 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 APY29_RS12945 9cb9edc2c05398d4c5a39c2ddd7be51c 566 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 253 445 2.2E-55 T 28-03-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 APY29_RS19625 40e0e62d7a6ea8cb5236fb37288cbb32 301 Gene3D G3DSA:3.40.190.10 179 269 1.3E-22 T 28-03-2018 APY29_RS19625 40e0e62d7a6ea8cb5236fb37288cbb32 301 Pfam PF03466 LysR substrate binding domain 94 292 7.2E-39 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS19625 40e0e62d7a6ea8cb5236fb37288cbb32 301 SUPERFAMILY SSF53850 94 295 5.76E-41 T 28-03-2018 APY29_RS19625 40e0e62d7a6ea8cb5236fb37288cbb32 301 SUPERFAMILY SSF46785 3 113 1.94E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS19625 40e0e62d7a6ea8cb5236fb37288cbb32 301 Gene3D G3DSA:1.10.10.10 1 85 2.7E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS19625 40e0e62d7a6ea8cb5236fb37288cbb32 301 Gene3D G3DSA:3.40.190.10 90 178 5.0E-24 T 28-03-2018 APY29_RS19625 40e0e62d7a6ea8cb5236fb37288cbb32 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.2E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS17880 d4997fc62e18ca5ccb0836fba5ed493b 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 18 33 3.4E-35 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APY29_RS17880 d4997fc62e18ca5ccb0836fba5ed493b 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 83 98 3.4E-35 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APY29_RS17880 d4997fc62e18ca5ccb0836fba5ed493b 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 111 126 3.4E-35 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APY29_RS17880 d4997fc62e18ca5ccb0836fba5ed493b 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 110 3.4E-35 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APY29_RS17880 d4997fc62e18ca5ccb0836fba5ed493b 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 56 3.4E-35 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APY29_RS17880 d4997fc62e18ca5ccb0836fba5ed493b 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 5 136 3.1E-50 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APY29_RS17880 d4997fc62e18ca5ccb0836fba5ed493b 164 SUPERFAMILY SSF50891 4 136 1.61E-58 T 28-03-2018 IPR029000 Cyclophilin-like domain APY29_RS17880 d4997fc62e18ca5ccb0836fba5ed493b 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 39 56 - T 28-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 APY29_RS17880 d4997fc62e18ca5ccb0836fba5ed493b 164 PIRSF PIRSF001467 2 156 7.2E-56 T 28-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 APY29_RS17880 d4997fc62e18ca5ccb0836fba5ed493b 164 Gene3D G3DSA:2.40.100.10 2 157 4.1E-63 T 28-03-2018 IPR029000 Cyclophilin-like domain APY29_RS06675 c10cc3e65904810a80aef4ed55dced70 613 SUPERFAMILY SSF51445 32 357 5.77E-95 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS06675 c10cc3e65904810a80aef4ed55dced70 613 ProSitePatterns PS01182 Glycosyl hydrolases family 35 putative active site. 175 187 - T 28-03-2018 IPR019801 Glycoside hydrolase, family 35, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APY29_RS06675 c10cc3e65904810a80aef4ed55dced70 613 Gene3D G3DSA:3.20.20.80 25 362 2.0E-78 T 28-03-2018 APY29_RS06675 c10cc3e65904810a80aef4ed55dced70 613 SUPERFAMILY SSF49785 469 594 1.46E-21 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS06675 c10cc3e65904810a80aef4ed55dced70 613 Gene3D G3DSA:2.60.120.260 380 501 1.2E-38 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS06675 c10cc3e65904810a80aef4ed55dced70 613 PRINTS PR00742 Glycosyl hydrolase family 35 signature 325 341 1.9E-46 T 28-03-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APY29_RS06675 c10cc3e65904810a80aef4ed55dced70 613 PRINTS PR00742 Glycosyl hydrolase family 35 signature 63 81 1.9E-46 T 28-03-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APY29_RS06675 c10cc3e65904810a80aef4ed55dced70 613 PRINTS PR00742 Glycosyl hydrolase family 35 signature 173 188 1.9E-46 T 28-03-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APY29_RS06675 c10cc3e65904810a80aef4ed55dced70 613 PRINTS PR00742 Glycosyl hydrolase family 35 signature 118 137 1.9E-46 T 28-03-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APY29_RS06675 c10cc3e65904810a80aef4ed55dced70 613 PRINTS PR00742 Glycosyl hydrolase family 35 signature 551 567 1.9E-46 T 28-03-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APY29_RS06675 c10cc3e65904810a80aef4ed55dced70 613 PRINTS PR00742 Glycosyl hydrolase family 35 signature 259 274 1.9E-46 T 28-03-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APY29_RS06675 c10cc3e65904810a80aef4ed55dced70 613 PRINTS PR00742 Glycosyl hydrolase family 35 signature 42 59 1.9E-46 T 28-03-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APY29_RS06675 c10cc3e65904810a80aef4ed55dced70 613 SUPERFAMILY SSF49785 382 478 1.7E-5 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS06675 c10cc3e65904810a80aef4ed55dced70 613 Gene3D G3DSA:2.60.120.260 502 610 2.4E-17 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS06675 c10cc3e65904810a80aef4ed55dced70 613 PIRSF PIRSF006336 2 607 1.1E-181 T 28-03-2018 IPR026283 Beta-galactosidase 1-like GO:0004565 APY29_RS06675 c10cc3e65904810a80aef4ed55dced70 613 Pfam PF01301 Glycosyl hydrolases family 35 38 355 1.5E-120 T 28-03-2018 IPR031330 Glycoside hydrolase 35, catalytic domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APY29_RS14470 8dc0abf987ad2832a810ca52dec79efc 426 PIRSF PIRSF001529 1 426 1.1E-166 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 APY29_RS14470 8dc0abf987ad2832a810ca52dec79efc 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 226 402 2.4E-33 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS14470 8dc0abf987ad2832a810ca52dec79efc 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 3.4E-30 T 28-03-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 APY29_RS14470 8dc0abf987ad2832a810ca52dec79efc 426 SUPERFAMILY SSF55681 117 423 4.39E-98 T 28-03-2018 APY29_RS14470 8dc0abf987ad2832a810ca52dec79efc 426 SUPERFAMILY SSF46589 1 113 9.42E-27 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 APY29_RS14470 8dc0abf987ad2832a810ca52dec79efc 426 Gene3D G3DSA:1.10.287.40 2 105 2.3E-21 T 28-03-2018 APY29_RS14470 8dc0abf987ad2832a810ca52dec79efc 426 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 2.4E-33 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 APY29_RS14470 8dc0abf987ad2832a810ca52dec79efc 426 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 2.4E-33 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 APY29_RS14470 8dc0abf987ad2832a810ca52dec79efc 426 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 2.4E-33 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 APY29_RS14470 8dc0abf987ad2832a810ca52dec79efc 426 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 2.4E-33 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 APY29_RS14470 8dc0abf987ad2832a810ca52dec79efc 426 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 2.4E-33 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 APY29_RS14470 8dc0abf987ad2832a810ca52dec79efc 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 424 39.328 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 APY29_RS14470 8dc0abf987ad2832a810ca52dec79efc 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 419 1.5E-161 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 APY29_RS14470 8dc0abf987ad2832a810ca52dec79efc 426 Gene3D G3DSA:3.30.930.10 106 426 1.2E-94 T 28-03-2018 APY29_RS18870 972db9c8d8301b359e9fac4617df2e39 923 SUPERFAMILY SSF56935 39 252 7.06E-76 T 28-03-2018 APY29_RS18870 972db9c8d8301b359e9fac4617df2e39 923 SUPERFAMILY SSF56935 298 510 7.06E-76 T 28-03-2018 APY29_RS18870 972db9c8d8301b359e9fac4617df2e39 923 SUPERFAMILY SSF56935 557 907 7.06E-76 T 28-03-2018 APY29_RS18870 972db9c8d8301b359e9fac4617df2e39 923 Gene3D G3DSA:2.40.170.20 192 923 1.7E-62 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS18870 972db9c8d8301b359e9fac4617df2e39 923 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 46 923 3.6E-204 T 28-03-2018 IPR010104 Bacterial TonB-dependent receptor APY29_RS18870 972db9c8d8301b359e9fac4617df2e39 923 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 179 4.6E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS18870 972db9c8d8301b359e9fac4617df2e39 923 Pfam PF00593 TonB dependent receptor 422 895 2.3E-33 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS18870 972db9c8d8301b359e9fac4617df2e39 923 Gene3D G3DSA:2.170.130.10 37 191 1.1E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS12515 7bac528faf6adb46630c9717d3fcc8b9 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 28-03-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APY29_RS12515 7bac528faf6adb46630c9717d3fcc8b9 141 SUPERFAMILY SSF54919 1 140 2.62E-54 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APY29_RS12515 7bac528faf6adb46630c9717d3fcc8b9 141 Gene3D G3DSA:3.30.70.141 56 140 1.6E-30 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APY29_RS12515 7bac528faf6adb46630c9717d3fcc8b9 141 Gene3D G3DSA:3.30.70.141 1 55 1.8E-16 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APY29_RS12515 7bac528faf6adb46630c9717d3fcc8b9 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 2.3E-39 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APY29_RS12515 7bac528faf6adb46630c9717d3fcc8b9 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 2.3E-39 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APY29_RS12515 7bac528faf6adb46630c9717d3fcc8b9 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 2.3E-39 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APY29_RS12515 7bac528faf6adb46630c9717d3fcc8b9 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 2.3E-39 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APY29_RS12515 7bac528faf6adb46630c9717d3fcc8b9 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 2.3E-39 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APY29_RS12515 7bac528faf6adb46630c9717d3fcc8b9 141 Pfam PF00334 Nucleoside diphosphate kinase 4 137 1.2E-52 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APY29_RS12515 7bac528faf6adb46630c9717d3fcc8b9 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.8 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APY29_RS12515 7bac528faf6adb46630c9717d3fcc8b9 141 SMART SM00562 3 140 7.9E-82 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APY29_RS11445 d89071904109c102fec0b669375d58cc 147 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 13 143 3.4E-50 T 28-03-2018 IPR022262 Lipoprotein, putative APY29_RS06455 f9700884b666e9ed5177ee856c5ec0bf 598 Gene3D G3DSA:3.40.50.300 201 348 1.9E-28 T 28-03-2018 APY29_RS06455 f9700884b666e9ed5177ee856c5ec0bf 598 Gene3D G3DSA:1.10.10.10 349 509 3.7E-52 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS06455 f9700884b666e9ed5177ee856c5ec0bf 598 SUPERFAMILY SSF47819 522 596 3.27E-22 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 APY29_RS06455 f9700884b666e9ed5177ee856c5ec0bf 598 Pfam PF09382 RQC domain 401 507 2.1E-42 T 28-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 APY29_RS06455 f9700884b666e9ed5177ee856c5ec0bf 598 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 6 597 4.8E-266 T 28-03-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 APY29_RS06455 f9700884b666e9ed5177ee856c5ec0bf 598 Pfam PF00570 HRDC domain 527 594 9.6E-22 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 APY29_RS06455 f9700884b666e9ed5177ee856c5ec0bf 598 Gene3D G3DSA:3.40.50.300 1 200 7.6E-33 T 28-03-2018 APY29_RS06455 f9700884b666e9ed5177ee856c5ec0bf 598 Pfam PF00271 Helicase conserved C-terminal domain 218 321 5.1E-14 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS06455 f9700884b666e9ed5177ee856c5ec0bf 598 SUPERFAMILY SSF52540 200 452 1.99E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS06455 f9700884b666e9ed5177ee856c5ec0bf 598 Gene3D G3DSA:1.10.150.80 510 597 5.9E-24 T 28-03-2018 APY29_RS06455 f9700884b666e9ed5177ee856c5ec0bf 598 Pfam PF00270 DEAD/DEAH box helicase 22 177 1.2E-17 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APY29_RS06455 f9700884b666e9ed5177ee856c5ec0bf 598 SMART SM00487 14 210 3.2E-25 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APY29_RS06455 f9700884b666e9ed5177ee856c5ec0bf 598 SUPERFAMILY SSF52540 4 189 3.48E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS06455 f9700884b666e9ed5177ee856c5ec0bf 598 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 456 4.3E-154 T 28-03-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 APY29_RS06455 f9700884b666e9ed5177ee856c5ec0bf 598 SMART SM00490 242 323 7.4E-22 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS06455 f9700884b666e9ed5177ee856c5ec0bf 598 Pfam PF16124 RecQ zinc-binding 335 397 7.2E-20 T 28-03-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain APY29_RS06455 f9700884b666e9ed5177ee856c5ec0bf 598 SMART SM00341 524 597 1.5E-10 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 APY29_RS06455 f9700884b666e9ed5177ee856c5ec0bf 598 SMART SM00956 404 507 2.0E-57 T 28-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 APY29_RS04845 f96b277c8e01664b6d200efc494d1c0e 212 SMART SM00421 146 203 9.0E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS04845 f96b277c8e01664b6d200efc494d1c0e 212 Pfam PF00072 Response regulator receiver domain 6 117 1.5E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS04845 f96b277c8e01664b6d200efc494d1c0e 212 Gene3D G3DSA:1.10.10.10 124 207 2.8E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS04845 f96b277c8e01664b6d200efc494d1c0e 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 1.9E-17 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS04845 f96b277c8e01664b6d200efc494d1c0e 212 Gene3D G3DSA:3.40.50.2300 1 123 3.0E-27 T 28-03-2018 APY29_RS04845 f96b277c8e01664b6d200efc494d1c0e 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS04845 f96b277c8e01664b6d200efc494d1c0e 212 SUPERFAMILY SSF46894 129 204 6.46E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS04845 f96b277c8e01664b6d200efc494d1c0e 212 SMART SM00448 4 118 7.1E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS04845 f96b277c8e01664b6d200efc494d1c0e 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.3E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS04845 f96b277c8e01664b6d200efc494d1c0e 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.3E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS04845 f96b277c8e01664b6d200efc494d1c0e 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.3E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS04845 f96b277c8e01664b6d200efc494d1c0e 212 SUPERFAMILY SSF52172 2 150 1.57E-26 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS22010 491410513195bcf25c29e79d6bae227b 367 Pfam PF07478 D-ala D-ala ligase C-terminus 148 348 9.2E-77 T 28-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS22010 491410513195bcf25c29e79d6bae227b 367 Gene3D G3DSA:3.30.470.20 213 360 7.6E-43 T 28-03-2018 APY29_RS22010 491410513195bcf25c29e79d6bae227b 367 SUPERFAMILY SSF56059 140 354 4.6E-61 T 28-03-2018 APY29_RS22010 491410513195bcf25c29e79d6bae227b 367 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 41.71 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS22010 491410513195bcf25c29e79d6bae227b 367 Pfam PF01820 D-ala D-ala ligase N-terminus 5 130 9.2E-30 T 28-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS22010 491410513195bcf25c29e79d6bae227b 367 PIRSF PIRSF039102 1 359 6.6E-128 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS22010 491410513195bcf25c29e79d6bae227b 367 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS22010 491410513195bcf25c29e79d6bae227b 367 Gene3D G3DSA:3.40.50.20 1 150 1.0E-44 T 28-03-2018 APY29_RS22010 491410513195bcf25c29e79d6bae227b 367 Gene3D G3DSA:3.30.1490.20 155 212 1.7E-20 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APY29_RS22010 491410513195bcf25c29e79d6bae227b 367 SUPERFAMILY SSF52440 3 139 7.19E-37 T 28-03-2018 IPR016185 Pre-ATP-grasp domain APY29_RS22010 491410513195bcf25c29e79d6bae227b 367 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS22010 491410513195bcf25c29e79d6bae227b 367 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 2.2E-112 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS14355 42349159db5506104766fe8c1a1dfe86 193 Gene3D G3DSA:1.10.1740.10 2 92 8.6E-17 T 28-03-2018 APY29_RS14355 42349159db5506104766fe8c1a1dfe86 193 Gene3D G3DSA:1.10.10.10 93 181 5.9E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS14355 42349159db5506104766fe8c1a1dfe86 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 178 8.5E-20 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS14355 42349159db5506104766fe8c1a1dfe86 193 Pfam PF04542 Sigma-70 region 2 30 93 3.5E-7 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS14355 42349159db5506104766fe8c1a1dfe86 193 Pfam PF08281 Sigma-70, region 4 123 175 2.2E-11 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS14355 42349159db5506104766fe8c1a1dfe86 193 SUPERFAMILY SSF88659 115 179 5.23E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS14355 42349159db5506104766fe8c1a1dfe86 193 SUPERFAMILY SSF88946 6 115 5.1E-21 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS18165 7523608086326f52fa1046acfa0675f2 319 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 132 147 - T 28-03-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 APY29_RS18165 7523608086326f52fa1046acfa0675f2 319 Gene3D G3DSA:3.40.50.2020 4 159 1.3E-65 T 28-03-2018 APY29_RS18165 7523608086326f52fa1046acfa0675f2 319 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 8 123 3.7E-46 T 28-03-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 APY29_RS18165 7523608086326f52fa1046acfa0675f2 319 SMART SM01400 7 124 4.3E-68 T 28-03-2018 APY29_RS18165 7523608086326f52fa1046acfa0675f2 319 Pfam PF14572 Phosphoribosyl synthetase-associated domain 208 317 1.5E-30 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 APY29_RS18165 7523608086326f52fa1046acfa0675f2 319 SUPERFAMILY SSF53271 72 307 6.04E-61 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like APY29_RS18165 7523608086326f52fa1046acfa0675f2 319 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 7 318 48.503 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 APY29_RS18165 7523608086326f52fa1046acfa0675f2 319 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 9 317 7.0E-116 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 APY29_RS18165 7523608086326f52fa1046acfa0675f2 319 Gene3D G3DSA:3.40.50.2020 160 294 2.1E-41 T 28-03-2018 APY29_RS16540 895196cc6c77d6fe6a427d4ba4c30dc7 368 Gene3D G3DSA:1.10.443.10 176 368 6.6E-32 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS16540 895196cc6c77d6fe6a427d4ba4c30dc7 368 SUPERFAMILY SSF56349 60 366 9.12E-49 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APY29_RS16540 895196cc6c77d6fe6a427d4ba4c30dc7 368 Gene3D G3DSA:1.10.150.130 51 167 6.7E-13 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal APY29_RS16540 895196cc6c77d6fe6a427d4ba4c30dc7 368 Pfam PF00589 Phage integrase family 186 359 1.8E-23 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS16105 4b65b6cf2d3968128a20a87a750be17c 184 SUPERFAMILY SSF53271 6 183 5.24E-45 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like APY29_RS16105 4b65b6cf2d3968128a20a87a750be17c 184 Gene3D G3DSA:3.40.50.2020 5 184 6.7E-38 T 28-03-2018 APY29_RS16105 4b65b6cf2d3968128a20a87a750be17c 184 Pfam PF00156 Phosphoribosyl transferase domain 15 170 1.5E-21 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 APY29_RS20740 96660249b41a0b1f2ffd256a1608dded 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 APY29_RS20740 96660249b41a0b1f2ffd256a1608dded 223 SUPERFAMILY SSF51366 4 217 1.18E-74 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APY29_RS20740 96660249b41a0b1f2ffd256a1608dded 223 PIRSF PIRSF001461 1 223 2.2E-103 T 28-03-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 APY29_RS20740 96660249b41a0b1f2ffd256a1608dded 223 Gene3D G3DSA:3.20.20.70 1 220 8.5E-88 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS20740 96660249b41a0b1f2ffd256a1608dded 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 APY29_RS20740 96660249b41a0b1f2ffd256a1608dded 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.4E-90 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 APY29_RS20740 96660249b41a0b1f2ffd256a1608dded 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 216 2.1E-96 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 APY29_RS19555 e3b28f35258619dcf48b9d5f71446012 500 Gene3D G3DSA:3.40.50.2300 376 500 1.1E-12 T 28-03-2018 APY29_RS19555 e3b28f35258619dcf48b9d5f71446012 500 SUPERFAMILY SSF47384 145 213 4.9E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS19555 e3b28f35258619dcf48b9d5f71446012 500 SUPERFAMILY SSF52172 379 498 3.13E-15 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS19555 e3b28f35258619dcf48b9d5f71446012 500 SMART SM00448 381 493 0.0082 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS19555 e3b28f35258619dcf48b9d5f71446012 500 SMART SM00448 11 122 1.2E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS19555 e3b28f35258619dcf48b9d5f71446012 500 Pfam PF00072 Response regulator receiver domain 383 459 1.6E-5 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS19555 e3b28f35258619dcf48b9d5f71446012 500 Pfam PF00072 Response regulator receiver domain 13 122 4.9E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS19555 e3b28f35258619dcf48b9d5f71446012 500 SMART SM00387 256 363 1.7E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS19555 e3b28f35258619dcf48b9d5f71446012 500 SUPERFAMILY SSF52172 10 143 1.29E-26 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS19555 e3b28f35258619dcf48b9d5f71446012 500 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 259 361 3.3E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS19555 e3b28f35258619dcf48b9d5f71446012 500 SMART SM00388 150 215 4.0E-4 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS19555 e3b28f35258619dcf48b9d5f71446012 500 SUPERFAMILY SSF55874 206 362 4.98E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS19555 e3b28f35258619dcf48b9d5f71446012 500 Gene3D G3DSA:3.40.50.2300 3 141 2.2E-24 T 28-03-2018 APY29_RS19555 e3b28f35258619dcf48b9d5f71446012 500 Gene3D G3DSA:3.30.565.10 216 366 2.6E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS19555 e3b28f35258619dcf48b9d5f71446012 500 Gene3D G3DSA:1.10.287.130 142 211 1.5E-5 T 28-03-2018 APY29_RS19555 e3b28f35258619dcf48b9d5f71446012 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 294 308 2.0E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS19555 e3b28f35258619dcf48b9d5f71446012 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 341 2.0E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS19555 e3b28f35258619dcf48b9d5f71446012 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 360 2.0E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS19555 e3b28f35258619dcf48b9d5f71446012 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 322 2.0E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS07790 b97999549dce38eeaddc9195f22cea0a 171 SMART SM00260 15 156 2.0E-29 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS07790 b97999549dce38eeaddc9195f22cea0a 171 SUPERFAMILY SSF50341 11 158 4.97E-36 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS07790 b97999549dce38eeaddc9195f22cea0a 171 Pfam PF01584 CheW-like domain 19 157 1.1E-32 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS07790 b97999549dce38eeaddc9195f22cea0a 171 Gene3D G3DSA:2.30.30.40 97 150 8.1E-17 T 28-03-2018 APY29_RS07790 b97999549dce38eeaddc9195f22cea0a 171 Gene3D G3DSA:2.40.50.180 39 96 6.8E-19 T 28-03-2018 APY29_RS02835 a66cb73aa5120867c98efb38e084aa26 250 Pfam PF13419 Haloacid dehalogenase-like hydrolase 72 193 6.8E-7 T 28-03-2018 IPR023214 HAD-like domain APY29_RS02835 a66cb73aa5120867c98efb38e084aa26 250 Gene3D G3DSA:3.40.50.1000 97 249 1.7E-18 T 28-03-2018 IPR023214 HAD-like domain APY29_RS02835 a66cb73aa5120867c98efb38e084aa26 250 SUPERFAMILY SSF56784 11 222 1.3E-25 T 28-03-2018 IPR023214 HAD-like domain APY29_RS02835 a66cb73aa5120867c98efb38e084aa26 250 Gene3D G3DSA:1.10.150.240 27 96 1.0E-27 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 APY29_RS13620 a8276d7eb471305ebc725aebd92c22b7 351 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 28-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 APY29_RS13620 a8276d7eb471305ebc725aebd92c22b7 351 PIRSF PIRSF000164 12 344 6.7E-97 T 28-03-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 APY29_RS13620 a8276d7eb471305ebc725aebd92c22b7 351 SUPERFAMILY SSF51395 1 338 9.99E-102 T 28-03-2018 APY29_RS13620 a8276d7eb471305ebc725aebd92c22b7 351 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 28-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 APY29_RS13620 a8276d7eb471305ebc725aebd92c22b7 351 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 336 49.758 T 28-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 APY29_RS13620 a8276d7eb471305ebc725aebd92c22b7 351 Pfam PF01180 Dihydroorotate dehydrogenase 48 333 5.4E-89 T 28-03-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 APY29_RS13620 a8276d7eb471305ebc725aebd92c22b7 351 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 340 1.3E-125 T 28-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 APY29_RS13620 a8276d7eb471305ebc725aebd92c22b7 351 Gene3D G3DSA:3.20.20.70 1 341 2.0E-83 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS05980 33490b6236a070ca196f04b49850e94b 270 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 25 267 9.5E-73 T 28-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase APY29_RS05980 33490b6236a070ca196f04b49850e94b 270 Gene3D G3DSA:3.60.140.10 2 270 6.3E-86 T 28-03-2018 APY29_RS05980 33490b6236a070ca196f04b49850e94b 270 SUPERFAMILY SSF64438 6 268 4.58E-75 T 28-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic APY29_RS05980 33490b6236a070ca196f04b49850e94b 270 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 35 268 1.8E-51 T 28-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase APY29_RS17480 86ae1011e5c3bb407928b5b7e5d3396f 689 SUPERFAMILY SSF52540 34 223 3.21E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17480 86ae1011e5c3bb407928b5b7e5d3396f 689 Gene3D G3DSA:3.40.50.300 2 166 1.8E-41 T 28-03-2018 APY29_RS17480 86ae1011e5c3bb407928b5b7e5d3396f 689 SUPERFAMILY SSF48019 243 360 2.21E-28 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 APY29_RS17480 86ae1011e5c3bb407928b5b7e5d3396f 689 Pfam PF13177 DNA polymerase III, delta subunit 20 178 5.4E-45 T 28-03-2018 APY29_RS17480 86ae1011e5c3bb407928b5b7e5d3396f 689 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 359 1.8E-24 T 28-03-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 APY29_RS17480 86ae1011e5c3bb407928b5b7e5d3396f 689 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 564 684 3.4E-11 T 28-03-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS17480 86ae1011e5c3bb407928b5b7e5d3396f 689 Gene3D G3DSA:1.20.272.10 243 360 4.8E-9 T 28-03-2018 APY29_RS17480 86ae1011e5c3bb407928b5b7e5d3396f 689 SMART SM00382 37 188 1.8E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS17480 86ae1011e5c3bb407928b5b7e5d3396f 689 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 353 7.4E-125 T 28-03-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 APY29_RS17480 86ae1011e5c3bb407928b5b7e5d3396f 689 Gene3D G3DSA:1.10.8.60 167 242 4.0E-17 T 28-03-2018 APY29_RS17480 86ae1011e5c3bb407928b5b7e5d3396f 689 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.9E-5 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 APY29_RS17480 86ae1011e5c3bb407928b5b7e5d3396f 689 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.9E-5 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 APY29_RS11470 817f1f012c8dd6d41d98b5cc193efe69 119 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 15 119 9.7E-45 T 28-03-2018 IPR021356 Integrating conjugative element protein PFL4702 APY29_RS11470 817f1f012c8dd6d41d98b5cc193efe69 119 Pfam PF11190 Protein of unknown function (DUF2976) 32 118 1.5E-32 T 28-03-2018 IPR021356 Integrating conjugative element protein PFL4702 APY29_RS02570 2ed01139f34688d044a1e650bbfca5c7 309 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 45 219 1.0E-56 T 28-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 APY29_RS02570 2ed01139f34688d044a1e650bbfca5c7 309 Gene3D G3DSA:3.90.1530.10 33 136 6.5E-36 T 28-03-2018 APY29_RS02570 2ed01139f34688d044a1e650bbfca5c7 309 SMART SM00470 46 136 8.3E-36 T 28-03-2018 IPR003115 ParB/Sulfiredoxin APY29_RS02570 2ed01139f34688d044a1e650bbfca5c7 309 Pfam PF02195 ParB-like nuclease domain 47 136 2.4E-27 T 28-03-2018 IPR003115 ParB/Sulfiredoxin APY29_RS02570 2ed01139f34688d044a1e650bbfca5c7 309 SUPERFAMILY SSF110849 45 180 6.8E-33 T 28-03-2018 IPR003115 ParB/Sulfiredoxin APY29_RS02570 2ed01139f34688d044a1e650bbfca5c7 309 Gene3D G3DSA:1.10.10.730 137 184 1.9E-18 T 28-03-2018 APY29_RS12210 7a97c7b54703bf3d7f3f03d670d9fd86 273 Gene3D G3DSA:3.30.420.10 103 272 2.9E-42 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS12210 7a97c7b54703bf3d7f3f03d670d9fd86 273 SUPERFAMILY SSF53098 105 268 4.55E-39 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS12210 7a97c7b54703bf3d7f3f03d670d9fd86 273 Pfam PF00665 Integrase core domain 107 227 4.6E-25 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 APY29_RS02545 99f9b53374cda6d5de8e3c88c6588aa8 113 Pfam PF07578 Lipid A Biosynthesis N-terminal domain 26 98 4.0E-21 T 28-03-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 APY29_RS02545 99f9b53374cda6d5de8e3c88c6588aa8 113 PIRSF PIRSF028440 3 113 2.3E-46 T 28-03-2018 IPR014546 Uncharacterised conserved protein, lipid A biosynthesis APY29_RS02545 99f9b53374cda6d5de8e3c88c6588aa8 113 ProDom PD339292 LIPID A SYNTHASE LIPID-A-DISACCHARIDE TRANSFERASE GLYCOSYLTRANSFERASE BIOSYNTHESIS N-TERMINAL BIOSYNTHESIS SYNTHESIS 21 104 8.0E-42 T 28-03-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 APY29_RS02545 99f9b53374cda6d5de8e3c88c6588aa8 113 SMART SM01259 26 99 7.4E-22 T 28-03-2018 IPR011499 Lipid A biosynthesis, N-terminal GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 APY29_RS09635 a8284528bd47e106a69e7710cb5d0567 580 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 120 203 5.6E-38 T 28-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 APY29_RS09635 a8284528bd47e106a69e7710cb5d0567 580 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 121 211 4.1E-18 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APY29_RS09635 a8284528bd47e106a69e7710cb5d0567 580 Gene3D G3DSA:3.40.50.2300 4 100 2.4E-14 T 28-03-2018 APY29_RS09635 a8284528bd47e106a69e7710cb5d0567 580 Gene3D G3DSA:3.40.50.2300 118 216 2.8E-38 T 28-03-2018 APY29_RS09635 a8284528bd47e106a69e7710cb5d0567 580 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 233 572 3.4E-150 T 28-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 APY29_RS09635 a8284528bd47e106a69e7710cb5d0567 580 SUPERFAMILY SSF52794 5 102 3.92E-15 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APY29_RS09635 a8284528bd47e106a69e7710cb5d0567 580 SUPERFAMILY SSF52794 118 217 3.84E-36 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APY29_RS19615 f9b64def66128593565ce34c9acca95c 351 ProSitePatterns PS00893 Nudix box signature. 245 266 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APY29_RS19615 f9b64def66128593565ce34c9acca95c 351 SUPERFAMILY SSF55811 204 349 1.76E-29 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 APY29_RS19615 f9b64def66128593565ce34c9acca95c 351 Pfam PF00293 NUDIX domain 219 335 4.2E-15 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 APY29_RS19615 f9b64def66128593565ce34c9acca95c 351 Pfam PF01467 Cytidylyltransferase-like 9 65 2.0E-9 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APY29_RS19615 f9b64def66128593565ce34c9acca95c 351 Gene3D G3DSA:3.90.79.10 207 350 5.3E-30 T 28-03-2018 APY29_RS19615 f9b64def66128593565ce34c9acca95c 351 Gene3D G3DSA:3.40.50.620 1 206 2.4E-30 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS19615 f9b64def66128593565ce34c9acca95c 351 SUPERFAMILY SSF52374 9 180 1.72E-20 T 28-03-2018 APY29_RS19615 f9b64def66128593565ce34c9acca95c 351 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 9 62 8.6E-11 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APY29_RS17660 cb33dc6d4e93657cc9c381985397a88c 102 PRINTS PR00160 Glutaredoxin signature 16 34 2.9E-11 T 28-03-2018 IPR014025 Glutaredoxin subgroup APY29_RS17660 cb33dc6d4e93657cc9c381985397a88c 102 PRINTS PR00160 Glutaredoxin signature 58 71 2.9E-11 T 28-03-2018 IPR014025 Glutaredoxin subgroup APY29_RS17660 cb33dc6d4e93657cc9c381985397a88c 102 PRINTS PR00160 Glutaredoxin signature 72 85 2.9E-11 T 28-03-2018 IPR014025 Glutaredoxin subgroup APY29_RS17660 cb33dc6d4e93657cc9c381985397a88c 102 SUPERFAMILY SSF52833 8 95 1.08E-26 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS17660 cb33dc6d4e93657cc9c381985397a88c 102 ProSitePatterns PS00195 Glutaredoxin active site. 18 34 - T 28-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 APY29_RS17660 cb33dc6d4e93657cc9c381985397a88c 102 Pfam PF00462 Glutaredoxin 16 75 6.7E-17 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APY29_RS17660 cb33dc6d4e93657cc9c381985397a88c 102 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 16 94 2.7E-33 T 28-03-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 APY29_RS17660 cb33dc6d4e93657cc9c381985397a88c 102 Gene3D G3DSA:3.40.30.10 15 101 1.3E-25 T 28-03-2018 APY29_RS15960 85db6cce9ce43eea6575afaaa828a9f9 349 Gene3D G3DSA:1.20.1510.10 38 248 1.6E-33 T 28-03-2018 APY29_RS15960 85db6cce9ce43eea6575afaaa828a9f9 349 Pfam PF01545 Cation efflux family 42 245 1.5E-31 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APY29_RS15960 85db6cce9ce43eea6575afaaa828a9f9 349 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 40 331 2.4E-42 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APY29_RS15960 85db6cce9ce43eea6575afaaa828a9f9 349 Gene3D G3DSA:3.30.70.1350 249 339 5.0E-4 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain APY29_RS15960 85db6cce9ce43eea6575afaaa828a9f9 349 SUPERFAMILY SSF161111 37 250 3.92E-42 T 28-03-2018 APY29_RS07780 b5607d008bcc3b0fe821d6d77656c861 275 SUPERFAMILY SSF53335 84 270 5.97E-49 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS07780 b5607d008bcc3b0fe821d6d77656c861 275 SMART SM00138 16 275 5.5E-78 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APY29_RS07780 b5607d008bcc3b0fe821d6d77656c861 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 84 261 1.3E-50 T 28-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal APY29_RS07780 b5607d008bcc3b0fe821d6d77656c861 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 17 68 1.3E-14 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal APY29_RS07780 b5607d008bcc3b0fe821d6d77656c861 275 PRINTS PR00996 Glutamate methyltransferase family signature 112 132 9.4E-37 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APY29_RS07780 b5607d008bcc3b0fe821d6d77656c861 275 PRINTS PR00996 Glutamate methyltransferase family signature 77 89 9.4E-37 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APY29_RS07780 b5607d008bcc3b0fe821d6d77656c861 275 PRINTS PR00996 Glutamate methyltransferase family signature 144 160 9.4E-37 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APY29_RS07780 b5607d008bcc3b0fe821d6d77656c861 275 PRINTS PR00996 Glutamate methyltransferase family signature 215 229 9.4E-37 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APY29_RS07780 b5607d008bcc3b0fe821d6d77656c861 275 PRINTS PR00996 Glutamate methyltransferase family signature 234 257 9.4E-37 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APY29_RS07780 b5607d008bcc3b0fe821d6d77656c861 275 PRINTS PR00996 Glutamate methyltransferase family signature 38 51 9.4E-37 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APY29_RS07780 b5607d008bcc3b0fe821d6d77656c861 275 Gene3D G3DSA:3.40.50.150 83 275 3.9E-44 T 28-03-2018 APY29_RS07780 b5607d008bcc3b0fe821d6d77656c861 275 Gene3D G3DSA:1.10.155.10 8 82 1.3E-18 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal APY29_RS07780 b5607d008bcc3b0fe821d6d77656c861 275 PIRSF PIRSF000410 2 275 8.1E-89 T 28-03-2018 IPR026024 Chemotaxis protein methyltransferase CheR APY29_RS07780 b5607d008bcc3b0fe821d6d77656c861 275 SUPERFAMILY SSF47757 5 83 7.98E-19 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal APY29_RS05155 ff5b5dc6b77f361da0ed478aa5087519 149 Gene3D G3DSA:2.60.40.420 22 147 3.4E-13 T 28-03-2018 IPR008972 Cupredoxin APY29_RS05155 ff5b5dc6b77f361da0ed478aa5087519 149 TIGRFAM TIGR02695 azurin: azurin 24 148 2.4E-59 T 28-03-2018 IPR014068 Azurin APY29_RS05155 ff5b5dc6b77f361da0ed478aa5087519 149 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 126 142 - T 28-03-2018 IPR028871 Blue (type 1) copper protein, binding site APY29_RS05155 ff5b5dc6b77f361da0ed478aa5087519 149 SUPERFAMILY SSF49503 23 147 1.03E-42 T 28-03-2018 IPR008972 Cupredoxin APY29_RS05155 ff5b5dc6b77f361da0ed478aa5087519 149 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 26 149 7.0E-69 T 28-03-2018 APY29_RS05155 ff5b5dc6b77f361da0ed478aa5087519 149 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 23 147 3.6E-20 T 28-03-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 APY29_RS09755 f34c7c49ad0ba212c5ea04a50fa01c5c 414 SUPERFAMILY SSF52172 122 252 1.57E-30 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS09755 f34c7c49ad0ba212c5ea04a50fa01c5c 414 SMART SM00448 121 235 3.6E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS09755 f34c7c49ad0ba212c5ea04a50fa01c5c 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 252 409 2.8E-42 T 28-03-2018 IPR000160 GGDEF domain APY29_RS09755 f34c7c49ad0ba212c5ea04a50fa01c5c 414 Pfam PF00072 Response regulator receiver domain 124 232 2.3E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS09755 f34c7c49ad0ba212c5ea04a50fa01c5c 414 Gene3D G3DSA:3.30.70.270 245 414 4.0E-54 T 28-03-2018 APY29_RS09755 f34c7c49ad0ba212c5ea04a50fa01c5c 414 Gene3D G3DSA:3.40.50.2300 117 243 5.4E-28 T 28-03-2018 APY29_RS09755 f34c7c49ad0ba212c5ea04a50fa01c5c 414 SMART SM00267 241 413 1.4E-52 T 28-03-2018 IPR000160 GGDEF domain APY29_RS09755 f34c7c49ad0ba212c5ea04a50fa01c5c 414 Gene3D G3DSA:3.40.50.2300 1 116 5.1E-9 T 28-03-2018 APY29_RS09755 f34c7c49ad0ba212c5ea04a50fa01c5c 414 SUPERFAMILY SSF52172 1 120 1.04E-10 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS09755 f34c7c49ad0ba212c5ea04a50fa01c5c 414 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 248 412 5.9E-49 T 28-03-2018 IPR000160 GGDEF domain APY29_RS09755 f34c7c49ad0ba212c5ea04a50fa01c5c 414 SUPERFAMILY SSF55073 257 412 5.65E-47 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS06210 fcce47b7ec89be17d916b958633634d5 565 Gene3D G3DSA:3.40.50.720 419 555 1.5E-17 T 28-03-2018 APY29_RS06210 fcce47b7ec89be17d916b958633634d5 565 Pfam PF00999 Sodium/hydrogen exchanger family 12 391 3.7E-81 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APY29_RS06210 fcce47b7ec89be17d916b958633634d5 565 Gene3D G3DSA:1.20.91.10 245 326 4.9E-7 T 28-03-2018 APY29_RS06210 fcce47b7ec89be17d916b958633634d5 565 Pfam PF02254 TrkA-N domain 425 537 3.0E-21 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APY29_RS06210 fcce47b7ec89be17d916b958633634d5 565 SUPERFAMILY SSF51735 422 553 1.9E-26 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS23260 c13c7b8fab3178c8180c15e87f77955f 821 SUPERFAMILY SSF48208 313 757 9.98E-18 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 APY29_RS23260 c13c7b8fab3178c8180c15e87f77955f 821 Gene3D G3DSA:2.70.98.10 41 363 4.0E-70 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 APY29_RS23260 c13c7b8fab3178c8180c15e87f77955f 821 Gene3D G3DSA:1.20.1050.60 386 481 1.9E-25 T 28-03-2018 APY29_RS23260 c13c7b8fab3178c8180c15e87f77955f 821 Gene3D G3DSA:3.30.2080.10 666 813 1.3E-52 T 28-03-2018 APY29_RS23260 c13c7b8fab3178c8180c15e87f77955f 821 Pfam PF07971 Glycosyl hydrolase family 92 279 798 6.4E-146 T 28-03-2018 IPR012939 Glycosyl hydrolase family 92 APY29_RS23260 c13c7b8fab3178c8180c15e87f77955f 821 Gene3D G3DSA:1.20.1610.10 483 665 2.8E-45 T 28-03-2018 APY29_RS23260 c13c7b8fab3178c8180c15e87f77955f 821 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 46 800 2.4E-147 T 28-03-2018 IPR005887 Alpha-1,2-mannosidase, putative APY29_RS08390 106028893471680590a1b468e89bffb7 567 Pfam PF00245 Alkaline phosphatase 70 532 1.1E-122 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APY29_RS08390 106028893471680590a1b468e89bffb7 567 SMART SM00098 71 537 3.5E-152 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APY29_RS08390 106028893471680590a1b468e89bffb7 567 SUPERFAMILY SSF53649 62 533 2.04E-143 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APY29_RS08390 106028893471680590a1b468e89bffb7 567 PRINTS PR00113 Alkaline phosphatase signature 70 90 1.3E-43 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APY29_RS08390 106028893471680590a1b468e89bffb7 567 PRINTS PR00113 Alkaline phosphatase signature 172 192 1.3E-43 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APY29_RS08390 106028893471680590a1b468e89bffb7 567 PRINTS PR00113 Alkaline phosphatase signature 126 141 1.3E-43 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APY29_RS08390 106028893471680590a1b468e89bffb7 567 PRINTS PR00113 Alkaline phosphatase signature 235 245 1.3E-43 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APY29_RS08390 106028893471680590a1b468e89bffb7 567 PRINTS PR00113 Alkaline phosphatase signature 323 352 1.3E-43 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APY29_RS08390 106028893471680590a1b468e89bffb7 567 Gene3D G3DSA:3.40.720.10 35 536 2.3E-141 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APY29_RS15585 512204eda0097d87014c6a8a64e3fdc6 350 SMART SM00722 155 295 1.4E-4 T 28-03-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain APY29_RS15585 512204eda0097d87014c6a8a64e3fdc6 350 SUPERFAMILY SSF51126 44 339 7.7E-36 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS15585 512204eda0097d87014c6a8a64e3fdc6 350 SMART SM00710 203 225 620.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat APY29_RS15585 512204eda0097d87014c6a8a64e3fdc6 350 SMART SM00710 288 311 3100.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat APY29_RS15585 512204eda0097d87014c6a8a64e3fdc6 350 SMART SM00710 226 248 14.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat APY29_RS15585 512204eda0097d87014c6a8a64e3fdc6 350 SMART SM00710 249 271 61.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat APY29_RS15585 512204eda0097d87014c6a8a64e3fdc6 350 SMART SM00710 120 163 6400.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat APY29_RS15585 512204eda0097d87014c6a8a64e3fdc6 350 SMART SM00710 180 202 59.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat APY29_RS15585 512204eda0097d87014c6a8a64e3fdc6 350 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 229 263 5.9E-7 T 28-03-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 APY29_RS15585 512204eda0097d87014c6a8a64e3fdc6 350 Gene3D G3DSA:2.160.20.10 32 344 7.6E-35 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS15585 512204eda0097d87014c6a8a64e3fdc6 350 Pfam PF13229 Right handed beta helix region 150 269 2.4E-18 T 28-03-2018 APY29_RS10810 74e9ede01298bd7b6ae587ad901f5d49 817 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 70 111 2.7E-8 T 28-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS10810 74e9ede01298bd7b6ae587ad901f5d49 817 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 229 255 6.6E-17 T 28-03-2018 APY29_RS10810 74e9ede01298bd7b6ae587ad901f5d49 817 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 207 228 6.6E-17 T 28-03-2018 APY29_RS10810 74e9ede01298bd7b6ae587ad901f5d49 817 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 6.6E-17 T 28-03-2018 APY29_RS10810 74e9ede01298bd7b6ae587ad901f5d49 817 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 260 778 7.7E-193 T 28-03-2018 IPR018752 Uncharacterised protein family UPF0753 APY29_RS10810 74e9ede01298bd7b6ae587ad901f5d49 817 Pfam PF00361 Proton-conducting membrane transporter 129 260 2.9E-16 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS10810 74e9ede01298bd7b6ae587ad901f5d49 817 Gene3D G3DSA:3.40.50.720 254 603 2.4E-4 T 28-03-2018 APY29_RS21300 27bde21adf481462890162a62e898f96 287 SMART SM00882 5 224 3.7E-34 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 APY29_RS21300 27bde21adf481462890162a62e898f96 287 SUPERFAMILY SSF100950 5 274 1.36E-72 T 28-03-2018 APY29_RS21300 27bde21adf481462890162a62e898f96 287 Gene3D G3DSA:3.40.1080.10 2 286 1.7E-48 T 28-03-2018 APY29_RS21300 27bde21adf481462890162a62e898f96 287 Pfam PF01144 Coenzyme A transferase 6 222 1.4E-18 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 APY29_RS17180 969673941d66074ba2ca92174911d04c 569 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 102 121 1.5E-22 T 28-03-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 APY29_RS17180 969673941d66074ba2ca92174911d04c 569 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 310 332 1.5E-22 T 28-03-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 APY29_RS17180 969673941d66074ba2ca92174911d04c 569 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 68 80 1.5E-22 T 28-03-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 APY29_RS17180 969673941d66074ba2ca92174911d04c 569 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 333 347 1.5E-22 T 28-03-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 APY29_RS17180 969673941d66074ba2ca92174911d04c 569 Gene3D G3DSA:3.40.50.150 45 390 1.6E-61 T 28-03-2018 APY29_RS17180 969673941d66074ba2ca92174911d04c 569 SUPERFAMILY SSF53335 280 379 4.57E-74 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS17180 969673941d66074ba2ca92174911d04c 569 SUPERFAMILY SSF53335 43 230 4.57E-74 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS17180 969673941d66074ba2ca92174911d04c 569 Pfam PF01555 DNA methylase 68 365 3.9E-45 T 28-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 APY29_RS17180 969673941d66074ba2ca92174911d04c 569 PIRSF PIRSF015855 2 553 8.9E-116 T 28-03-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 APY29_RS17180 969673941d66074ba2ca92174911d04c 569 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 71 77 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APY29_RS03540 79dc9a4929827233e5d5c39e213fcaa5 231 SUPERFAMILY SSF53448 1 200 1.53E-35 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS03540 79dc9a4929827233e5d5c39e213fcaa5 231 Gene3D G3DSA:3.90.550.10 1 231 1.5E-34 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS03540 79dc9a4929827233e5d5c39e213fcaa5 231 Pfam PF00535 Glycosyl transferase family 2 3 152 6.7E-16 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 APY29_RS17435 a697e57c397bf629297de045abd23b72 329 Pfam PF00535 Glycosyl transferase family 2 20 139 2.2E-8 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 APY29_RS17435 a697e57c397bf629297de045abd23b72 329 SUPERFAMILY SSF53448 9 251 8.84E-24 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS17435 a697e57c397bf629297de045abd23b72 329 Gene3D G3DSA:3.90.550.10 5 248 2.2E-17 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS19325 7868dd9804190d7c03295af236c1b229 504 SUPERFAMILY SSF47384 280 351 8.24E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS19325 7868dd9804190d7c03295af236c1b229 504 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 392 498 1.2E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS19325 7868dd9804190d7c03295af236c1b229 504 SMART SM00304 243 295 5.5E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS19325 7868dd9804190d7c03295af236c1b229 504 SMART SM00388 296 353 1.1E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS19325 7868dd9804190d7c03295af236c1b229 504 Gene3D G3DSA:3.30.565.10 367 504 2.7E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS19325 7868dd9804190d7c03295af236c1b229 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 440 6.3E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS19325 7868dd9804190d7c03295af236c1b229 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 479 6.3E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS19325 7868dd9804190d7c03295af236c1b229 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 485 498 6.3E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS19325 7868dd9804190d7c03295af236c1b229 504 Gene3D G3DSA:1.10.287.130 286 366 7.2E-7 T 28-03-2018 APY29_RS19325 7868dd9804190d7c03295af236c1b229 504 SMART SM00387 392 501 1.5E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS19325 7868dd9804190d7c03295af236c1b229 504 SUPERFAMILY SSF55874 349 499 5.33E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS14195 04e8aeb22cf59cc52fe626a7ebb1f597 376 Pfam PF13439 Glycosyltransferase Family 4 30 140 4.2E-7 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 APY29_RS14195 04e8aeb22cf59cc52fe626a7ebb1f597 376 SUPERFAMILY SSF53756 28 366 6.28E-42 T 28-03-2018 APY29_RS14195 04e8aeb22cf59cc52fe626a7ebb1f597 376 Pfam PF00534 Glycosyl transferases group 1 184 344 2.1E-14 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 APY29_RS14195 04e8aeb22cf59cc52fe626a7ebb1f597 376 Gene3D G3DSA:3.40.50.2000 22 192 9.5E-8 T 28-03-2018 APY29_RS14195 04e8aeb22cf59cc52fe626a7ebb1f597 376 Gene3D G3DSA:3.40.50.2000 194 351 1.2E-27 T 28-03-2018 APY29_RS04030 dc55c3e4222a81ddb5989dd4efaf40ae 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 187 1.4E-36 T 28-03-2018 IPR023214 HAD-like domain APY29_RS04030 dc55c3e4222a81ddb5989dd4efaf40ae 216 SUPERFAMILY SSF56784 4 215 9.55E-59 T 28-03-2018 IPR023214 HAD-like domain APY29_RS04030 dc55c3e4222a81ddb5989dd4efaf40ae 216 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 101 180 1.0E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS04030 dc55c3e4222a81ddb5989dd4efaf40ae 216 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 7 215 5.5E-64 T 28-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 APY29_RS04030 dc55c3e4222a81ddb5989dd4efaf40ae 216 Gene3D G3DSA:3.40.50.1000 2 33 0.19 T 28-03-2018 IPR023214 HAD-like domain APY29_RS04030 dc55c3e4222a81ddb5989dd4efaf40ae 216 Gene3D G3DSA:3.40.50.1000 75 216 2.2E-37 T 28-03-2018 IPR023214 HAD-like domain APY29_RS04030 dc55c3e4222a81ddb5989dd4efaf40ae 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 184 1.6E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS04030 dc55c3e4222a81ddb5989dd4efaf40ae 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 1.2E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS04030 dc55c3e4222a81ddb5989dd4efaf40ae 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 1.2E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS04030 dc55c3e4222a81ddb5989dd4efaf40ae 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 1.2E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS04030 dc55c3e4222a81ddb5989dd4efaf40ae 216 Gene3D G3DSA:1.10.150.240 34 74 4.4E-15 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 APY29_RS20105 b2fa474ee9f8684294b67c5cbabc8a77 324 Gene3D G3DSA:3.40.30.10 39 187 3.2E-35 T 28-03-2018 APY29_RS20105 b2fa474ee9f8684294b67c5cbabc8a77 324 Gene3D G3DSA:1.20.1050.10 188 324 2.4E-42 T 28-03-2018 APY29_RS20105 b2fa474ee9f8684294b67c5cbabc8a77 324 SUPERFAMILY SSF52833 41 162 8.3E-16 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS20105 b2fa474ee9f8684294b67c5cbabc8a77 324 SUPERFAMILY SSF47616 175 322 1.67E-37 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like APY29_RS20105 b2fa474ee9f8684294b67c5cbabc8a77 324 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 157 2.9E-22 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APY29_RS20105 b2fa474ee9f8684294b67c5cbabc8a77 324 Pfam PF13410 Glutathione S-transferase, C-terminal domain 202 272 1.5E-13 T 28-03-2018 APY29_RS20105 b2fa474ee9f8684294b67c5cbabc8a77 324 PIRSF PIRSF015753 5 323 1.3E-135 T 28-03-2018 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 APY29_RS13310 1462ab35a1366fc32ee0ccf2353d9aa0 1746 Gene3D G3DSA:2.60.40.10 1561 1648 3.4E-8 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS13310 1462ab35a1366fc32ee0ccf2353d9aa0 1746 Gene3D G3DSA:2.60.40.10 1275 1382 3.0E-11 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS13310 1462ab35a1366fc32ee0ccf2353d9aa0 1746 Gene3D G3DSA:2.60.40.10 1383 1474 4.5E-8 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS13310 1462ab35a1366fc32ee0ccf2353d9aa0 1746 Gene3D G3DSA:2.60.40.10 1475 1560 6.1E-10 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS13310 1462ab35a1366fc32ee0ccf2353d9aa0 1746 SMART SM00060 1388 1463 27.0 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 APY29_RS13310 1462ab35a1366fc32ee0ccf2353d9aa0 1746 SMART SM00060 1477 1552 29.0 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 APY29_RS13310 1462ab35a1366fc32ee0ccf2353d9aa0 1746 SMART SM00060 1300 1374 7.6 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 APY29_RS13310 1462ab35a1366fc32ee0ccf2353d9aa0 1746 SMART SM00060 1566 1738 64.0 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 APY29_RS13310 1462ab35a1366fc32ee0ccf2353d9aa0 1746 SUPERFAMILY SSF49265 1495 1653 4.2E-9 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 APY29_RS13310 1462ab35a1366fc32ee0ccf2353d9aa0 1746 SUPERFAMILY SSF49265 1308 1472 1.47E-8 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 APY29_RS13310 1462ab35a1366fc32ee0ccf2353d9aa0 1746 Pfam PF05593 RHS Repeat 680 714 2.0E-7 T 28-03-2018 IPR031325 RHS repeat APY29_RS13310 1462ab35a1366fc32ee0ccf2353d9aa0 1746 Gene3D G3DSA:2.60.40.10 1649 1745 1.9E-5 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS15620 1d180bc7da34ed503b3945d5572f8e3f 183 SMART SM00972 120 180 5.9E-22 T 28-03-2018 IPR007893 Spore coat protein U APY29_RS15620 1d180bc7da34ed503b3945d5572f8e3f 183 Pfam PF05229 Spore Coat Protein U domain 34 180 2.1E-34 T 28-03-2018 IPR007893 Spore coat protein U APY29_RS19795 fe2c8a195ecc38c060eec53534380219 151 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 102 3.1E-16 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain APY29_RS19795 fe2c8a195ecc38c060eec53534380219 151 SUPERFAMILY SSF53927 7 148 7.7E-35 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 APY29_RS19795 fe2c8a195ecc38c060eec53534380219 151 Gene3D G3DSA:3.40.140.10 3 150 7.0E-32 T 28-03-2018 APY29_RS09365 09d6356e0593e1083008fd963f2f80d9 399 SUPERFAMILY SSF55920 165 391 8.64E-67 T 28-03-2018 IPR000994 Peptidase M24 APY29_RS09365 09d6356e0593e1083008fd963f2f80d9 399 Pfam PF00557 Metallopeptidase family M24 174 381 2.8E-48 T 28-03-2018 IPR000994 Peptidase M24 APY29_RS09365 09d6356e0593e1083008fd963f2f80d9 399 Gene3D G3DSA:3.90.230.10 165 396 3.7E-63 T 28-03-2018 APY29_RS09365 09d6356e0593e1083008fd963f2f80d9 399 SUPERFAMILY SSF53092 17 165 5.06E-24 T 28-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal APY29_RS09365 09d6356e0593e1083008fd963f2f80d9 399 Pfam PF01321 Creatinase/Prolidase N-terminal domain 35 166 5.9E-16 T 28-03-2018 IPR000587 Creatinase, N-terminal GO:0016787 APY29_RS09365 09d6356e0593e1083008fd963f2f80d9 399 Gene3D G3DSA:3.40.350.10 18 162 4.3E-21 T 28-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APY29_RS15685 a403b47ee56c3ea126842e6d035b128b 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 151 235 3.7E-39 T 28-03-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 APY29_RS15685 a403b47ee56c3ea126842e6d035b128b 396 PIRSF PIRSF006205 6 395 1.8E-146 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 APY29_RS15685 a403b47ee56c3ea126842e6d035b128b 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 7 389 7.1E-136 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 APY29_RS15685 a403b47ee56c3ea126842e6d035b128b 396 SUPERFAMILY SSF69055 299 388 5.36E-30 T 28-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 APY29_RS15685 a403b47ee56c3ea126842e6d035b128b 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 9 388 45.569 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 APY29_RS15685 a403b47ee56c3ea126842e6d035b128b 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 9 137 4.8E-40 T 28-03-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 APY29_RS15685 a403b47ee56c3ea126842e6d035b128b 396 SUPERFAMILY SSF51735 6 155 4.61E-40 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS15685 a403b47ee56c3ea126842e6d035b128b 396 Gene3D G3DSA:1.10.1740.10 308 392 1.5E-28 T 28-03-2018 APY29_RS15685 a403b47ee56c3ea126842e6d035b128b 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 267 383 1.3E-37 T 28-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 APY29_RS15685 a403b47ee56c3ea126842e6d035b128b 396 Gene3D G3DSA:3.40.50.720 6 155 6.4E-46 T 28-03-2018 APY29_RS15685 a403b47ee56c3ea126842e6d035b128b 396 SUPERFAMILY SSF55347 131 270 5.23E-58 T 28-03-2018 APY29_RS17785 b922c829c9940754cafe96974d633964 340 SUPERFAMILY SSF50129 1 173 6.09E-57 T 28-03-2018 IPR011032 GroES-like APY29_RS17785 b922c829c9940754cafe96974d633964 340 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 339 1.1E-146 T 28-03-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 APY29_RS17785 b922c829c9940754cafe96974d633964 340 SUPERFAMILY SSF51735 141 304 3.23E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS17785 b922c829c9940754cafe96974d633964 340 Pfam PF00107 Zinc-binding dehydrogenase 174 301 7.1E-29 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APY29_RS17785 b922c829c9940754cafe96974d633964 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 135 8.0E-34 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APY29_RS17785 b922c829c9940754cafe96974d633964 340 Gene3D G3DSA:3.90.180.10 1 155 7.3E-48 T 28-03-2018 APY29_RS17785 b922c829c9940754cafe96974d633964 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 APY29_RS17785 b922c829c9940754cafe96974d633964 340 SMART SM00829 12 337 5.7E-4 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APY29_RS17785 b922c829c9940754cafe96974d633964 340 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 339 58.277 T 28-03-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 APY29_RS17785 b922c829c9940754cafe96974d633964 340 Gene3D G3DSA:3.40.50.10730 156 306 1.4E-22 T 28-03-2018 APY29_RS07390 e9d22eb2e7b82eee1ed39e31b8a7a810 339 SUPERFAMILY SSF56112 22 307 1.11E-38 T 28-03-2018 IPR011009 Protein kinase-like domain APY29_RS07390 e9d22eb2e7b82eee1ed39e31b8a7a810 339 Gene3D G3DSA:3.30.200.20 7 97 7.2E-24 T 28-03-2018 APY29_RS07390 e9d22eb2e7b82eee1ed39e31b8a7a810 339 Pfam PF01636 Phosphotransferase enzyme family 30 249 2.9E-24 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase APY29_RS07390 e9d22eb2e7b82eee1ed39e31b8a7a810 339 Gene3D G3DSA:3.90.1200.10 98 265 4.9E-15 T 28-03-2018 APY29_RS08625 9e5933f2afba90ca194fa735d319b4ac 367 PIRSF PIRSF001456 3 361 1.5E-130 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 APY29_RS08625 9e5933f2afba90ca194fa735d319b4ac 367 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 34.879 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 APY29_RS08625 9e5933f2afba90ca194fa735d319b4ac 367 Pfam PF01264 Chorismate synthase 10 345 2.8E-130 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 APY29_RS08625 9e5933f2afba90ca194fa735d319b4ac 367 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 APY29_RS08625 9e5933f2afba90ca194fa735d319b4ac 367 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 4.8E-132 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 APY29_RS08625 9e5933f2afba90ca194fa735d319b4ac 367 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 APY29_RS08625 9e5933f2afba90ca194fa735d319b4ac 367 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 APY29_RS08625 9e5933f2afba90ca194fa735d319b4ac 367 SUPERFAMILY SSF103263 4 351 7.19E-140 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 APY29_RS08625 9e5933f2afba90ca194fa735d319b4ac 367 Gene3D G3DSA:3.60.150.10 3 358 1.5E-148 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 APY29_RS15690 ee98c92efe784f11a32f8085ff8faa2a 448 Gene3D G3DSA:2.30.42.10 28 197 1.7E-9 T 28-03-2018 APY29_RS15690 ee98c92efe784f11a32f8085ff8faa2a 448 SUPERFAMILY SSF50156 222 306 5.92E-14 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS15690 ee98c92efe784f11a32f8085ff8faa2a 448 SMART SM00228 211 279 1.2E-4 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS15690 ee98c92efe784f11a32f8085ff8faa2a 448 SMART SM00228 107 185 2.9 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS15690 ee98c92efe784f11a32f8085ff8faa2a 448 SUPERFAMILY SSF50156 89 174 2.63E-10 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS15690 ee98c92efe784f11a32f8085ff8faa2a 448 Gene3D G3DSA:2.30.42.10 220 305 3.2E-13 T 28-03-2018 APY29_RS15690 ee98c92efe784f11a32f8085ff8faa2a 448 Pfam PF02163 Peptidase family M50 11 432 4.0E-78 T 28-03-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889|Reactome: R-MMU-8963889 APY29_RS15690 ee98c92efe784f11a32f8085ff8faa2a 448 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 12 445 1.1E-101 T 28-03-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 APY29_RS13705 e19d9db36565d219dcd8bce46ef70a84 870 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 87 410 3.8E-77 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS13705 e19d9db36565d219dcd8bce46ef70a84 870 Gene3D G3DSA:2.60.120.430 702 857 6.2E-15 T 28-03-2018 APY29_RS13705 e19d9db36565d219dcd8bce46ef70a84 870 SUPERFAMILY SSF52279 451 666 1.96E-45 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APY29_RS13705 e19d9db36565d219dcd8bce46ef70a84 870 Gene3D G3DSA:3.20.20.300 67 427 6.7E-102 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS13705 e19d9db36565d219dcd8bce46ef70a84 870 Gene3D G3DSA:3.40.50.1700 436 670 1.2E-51 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APY29_RS13705 e19d9db36565d219dcd8bce46ef70a84 870 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 451 665 1.2E-34 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APY29_RS13705 e19d9db36565d219dcd8bce46ef70a84 870 PRINTS PR00133 Glycosyl hydrolase family 3 signature 263 279 1.8E-19 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS13705 e19d9db36565d219dcd8bce46ef70a84 870 PRINTS PR00133 Glycosyl hydrolase family 3 signature 222 238 1.8E-19 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS13705 e19d9db36565d219dcd8bce46ef70a84 870 PRINTS PR00133 Glycosyl hydrolase family 3 signature 176 195 1.8E-19 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS13705 e19d9db36565d219dcd8bce46ef70a84 870 PRINTS PR00133 Glycosyl hydrolase family 3 signature 152 168 1.8E-19 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS13705 e19d9db36565d219dcd8bce46ef70a84 870 PRINTS PR00133 Glycosyl hydrolase family 3 signature 333 351 1.8E-19 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS13705 e19d9db36565d219dcd8bce46ef70a84 870 SUPERFAMILY SSF51445 69 450 2.32E-104 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS05570 ca91a67cddcc23b9b5bb15eb08d8ecc8 319 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 303 9.4E-131 T 28-03-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 APY29_RS05570 ca91a67cddcc23b9b5bb15eb08d8ecc8 319 Gene3D G3DSA:3.40.50.1100 136 307 1.4E-46 T 28-03-2018 APY29_RS05570 ca91a67cddcc23b9b5bb15eb08d8ecc8 319 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 303 1.1E-123 T 28-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 APY29_RS05570 ca91a67cddcc23b9b5bb15eb08d8ecc8 319 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 28-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 APY29_RS05570 ca91a67cddcc23b9b5bb15eb08d8ecc8 319 Gene3D G3DSA:3.40.50.1100 40 135 6.8E-37 T 28-03-2018 APY29_RS05570 ca91a67cddcc23b9b5bb15eb08d8ecc8 319 SUPERFAMILY SSF53686 2 305 4.85E-92 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APY29_RS05570 ca91a67cddcc23b9b5bb15eb08d8ecc8 319 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 291 2.2E-62 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APY29_RS15460 1a7bf78dc4d781e4093715e2fc61c6b8 626 SMART SM00382 406 597 1.6E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS15460 1a7bf78dc4d781e4093715e2fc61c6b8 626 ProSitePatterns PS00211 ABC transporters family signature. 523 537 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS15460 1a7bf78dc4d781e4093715e2fc61c6b8 626 SUPERFAMILY SSF90123 31 343 6.67E-27 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS15460 1a7bf78dc4d781e4093715e2fc61c6b8 626 Gene3D G3DSA:3.40.50.300 377 624 1.3E-66 T 28-03-2018 APY29_RS15460 1a7bf78dc4d781e4093715e2fc61c6b8 626 SUPERFAMILY SSF52540 371 621 8.42E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS15460 1a7bf78dc4d781e4093715e2fc61c6b8 626 Pfam PF00005 ABC transporter 398 551 6.6E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS15460 1a7bf78dc4d781e4093715e2fc61c6b8 626 Gene3D G3DSA:1.20.1560.10 26 369 3.2E-24 T 28-03-2018 APY29_RS02185 2b5215d39d4e12a747da36e131cb8653 344 Pfam PF00753 Metallo-beta-lactamase superfamily 54 226 4.5E-24 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS02185 2b5215d39d4e12a747da36e131cb8653 344 SUPERFAMILY SSF56281 38 298 1.3E-50 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS02185 2b5215d39d4e12a747da36e131cb8653 344 SMART SM00849 51 256 2.5E-29 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS02185 2b5215d39d4e12a747da36e131cb8653 344 Gene3D G3DSA:3.60.15.10 27 292 7.2E-36 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS07720 fa8b21d9d2ded139909b32174593d80a 690 Pfam PF02554 Carbon starvation protein CstA 31 408 1.9E-165 T 28-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 APY29_RS07720 fa8b21d9d2ded139909b32174593d80a 690 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 3.3E-36 T 28-03-2018 IPR025299 CstA, C-terminal domain APY29_RS05035 c9ae55814de183e85709f5d584a8c286 297 SMART SM00342 189 272 4.3E-16 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS05035 c9ae55814de183e85709f5d584a8c286 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 226 268 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APY29_RS05035 c9ae55814de183e85709f5d584a8c286 297 Gene3D G3DSA:1.10.10.60 167 226 3.6E-7 T 28-03-2018 APY29_RS05035 c9ae55814de183e85709f5d584a8c286 297 SUPERFAMILY SSF46689 225 275 1.21E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS05035 c9ae55814de183e85709f5d584a8c286 297 Pfam PF12833 Helix-turn-helix domain 195 273 9.2E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS05035 c9ae55814de183e85709f5d584a8c286 297 Gene3D G3DSA:1.10.10.60 227 285 1.6E-11 T 28-03-2018 APY29_RS02060 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 SUPERFAMILY SSF52172 1 170 1.03E-39 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS02060 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 SMART SM00862 145 220 6.1E-26 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS02060 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 SMART SM00448 1 112 5.0E-41 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS02060 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 Gene3D G3DSA:1.10.10.10 116 227 1.5E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS02060 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 Gene3D G3DSA:3.40.50.2300 1 115 7.3E-35 T 28-03-2018 APY29_RS02060 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 3.7E-24 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS02060 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 Pfam PF00072 Response regulator receiver domain 3 113 3.4E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS13880 f7cfede9967f6972a96394b8d723e052 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 1.7E-26 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 APY29_RS13880 f7cfede9967f6972a96394b8d723e052 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 1.7E-26 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 APY29_RS13880 f7cfede9967f6972a96394b8d723e052 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 1.7E-26 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 APY29_RS13880 f7cfede9967f6972a96394b8d723e052 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 1.7E-26 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 APY29_RS13880 f7cfede9967f6972a96394b8d723e052 302 PIRSF PIRSF001365 2 299 3.7E-83 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 APY29_RS13880 f7cfede9967f6972a96394b8d723e052 302 Gene3D G3DSA:3.20.20.70 1 301 1.6E-88 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS13880 f7cfede9967f6972a96394b8d723e052 302 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 6 279 2.0E-79 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 APY29_RS13880 f7cfede9967f6972a96394b8d723e052 302 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 134 164 - T 28-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 APY29_RS13880 f7cfede9967f6972a96394b8d723e052 302 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 39 56 - T 28-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 APY29_RS13880 f7cfede9967f6972a96394b8d723e052 302 SUPERFAMILY SSF51569 3 286 2.09E-86 T 28-03-2018 APY29_RS13880 f7cfede9967f6972a96394b8d723e052 302 Pfam PF00701 Dihydrodipicolinate synthetase family 3 284 3.2E-76 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 APY29_RS13880 f7cfede9967f6972a96394b8d723e052 302 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 2 287 54.887 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 APY29_RS13880 f7cfede9967f6972a96394b8d723e052 302 SMART SM01130 2 289 3.3E-108 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 APY29_RS17655 80005bf0248ef6b7311e94a2bc9a8ac8 131 SUPERFAMILY SSF69118 8 112 3.14E-24 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 APY29_RS17655 80005bf0248ef6b7311e94a2bc9a8ac8 131 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 48 95 4.0E-10 T 28-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APY29_RS17655 80005bf0248ef6b7311e94a2bc9a8ac8 131 Pfam PF02627 Carboxymuconolactone decarboxylase family 32 112 9.9E-17 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APY29_RS17655 80005bf0248ef6b7311e94a2bc9a8ac8 131 Gene3D G3DSA:1.20.1290.10 1 129 2.5E-20 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 APY29_RS15345 d540d6313d5bf45549cb7f35a83120fb 241 Pfam PF13488 Glycine zipper 50 95 4.1E-11 T 28-03-2018 APY29_RS15345 d540d6313d5bf45549cb7f35a83120fb 241 SUPERFAMILY SSF103088 113 229 5.1E-41 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS15345 d540d6313d5bf45549cb7f35a83120fb 241 ProSitePatterns PS01068 OmpA-like domain. 158 202 - T 28-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 APY29_RS15345 d540d6313d5bf45549cb7f35a83120fb 241 Gene3D G3DSA:3.30.1330.60 84 239 3.0E-45 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS15345 d540d6313d5bf45549cb7f35a83120fb 241 PRINTS PR01021 OMPA domain signature 156 171 2.6E-17 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APY29_RS15345 d540d6313d5bf45549cb7f35a83120fb 241 PRINTS PR01021 OMPA domain signature 171 187 2.6E-17 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APY29_RS15345 d540d6313d5bf45549cb7f35a83120fb 241 PRINTS PR01021 OMPA domain signature 126 148 2.6E-17 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APY29_RS15345 d540d6313d5bf45549cb7f35a83120fb 241 Pfam PF00691 OmpA family 125 220 1.7E-24 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS05845 7a37559fcee29b8cb99b4b7e26a9a2d5 710 Pfam PF00128 Alpha amylase, catalytic domain 201 310 4.7E-13 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS05845 7a37559fcee29b8cb99b4b7e26a9a2d5 710 SUPERFAMILY SSF51445 148 481 4.91E-138 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS05845 7a37559fcee29b8cb99b4b7e26a9a2d5 710 SUPERFAMILY SSF51445 510 587 4.91E-138 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS05845 7a37559fcee29b8cb99b4b7e26a9a2d5 710 SMART SM00642 173 578 4.7E-10 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS05845 7a37559fcee29b8cb99b4b7e26a9a2d5 710 SUPERFAMILY SSF51011 599 707 4.96E-24 T 28-03-2018 APY29_RS05845 7a37559fcee29b8cb99b4b7e26a9a2d5 710 Gene3D G3DSA:2.60.40.10 17 151 6.1E-46 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS05845 7a37559fcee29b8cb99b4b7e26a9a2d5 710 Gene3D G3DSA:3.20.20.80 152 590 3.2E-115 T 28-03-2018 APY29_RS05845 7a37559fcee29b8cb99b4b7e26a9a2d5 710 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 24 108 2.6E-20 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 APY29_RS05845 7a37559fcee29b8cb99b4b7e26a9a2d5 710 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 18 705 0.0 T 28-03-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 APY29_RS05845 7a37559fcee29b8cb99b4b7e26a9a2d5 710 Gene3D G3DSA:2.60.40.1180 591 709 4.3E-26 T 28-03-2018 APY29_RS05845 7a37559fcee29b8cb99b4b7e26a9a2d5 710 SUPERFAMILY SSF81296 18 161 4.48E-49 T 28-03-2018 IPR014756 Immunoglobulin E-set APY29_RS08135 f143f81618674651de5e35f671107a1d 229 SUPERFAMILY SSF46894 128 228 1.96E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS08135 f143f81618674651de5e35f671107a1d 229 Pfam PF00072 Response regulator receiver domain 6 114 1.9E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS08135 f143f81618674651de5e35f671107a1d 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 228 1.8E-17 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS08135 f143f81618674651de5e35f671107a1d 229 Gene3D G3DSA:1.10.10.10 124 229 6.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS08135 f143f81618674651de5e35f671107a1d 229 SMART SM00862 152 228 7.6E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS08135 f143f81618674651de5e35f671107a1d 229 SUPERFAMILY SSF52172 1 126 7.68E-40 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS08135 f143f81618674651de5e35f671107a1d 229 Gene3D G3DSA:3.40.50.2300 1 123 2.5E-36 T 28-03-2018 APY29_RS08135 f143f81618674651de5e35f671107a1d 229 SMART SM00448 4 114 5.2E-40 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS04120 af8dcdd6f052ed996b25fe098fcbbbba 98 Pfam PF04325 Protein of unknown function (DUF465) 46 92 2.9E-11 T 28-03-2018 IPR007420 Protein of unknown function DUF465 APY29_RS05945 4e047656e35bacb2dc5b3b43148b7b36 291 SMART SM00881 4 100 9.8E-38 T 28-03-2018 IPR003781 CoA-binding GO:0048037 APY29_RS05945 4e047656e35bacb2dc5b3b43148b7b36 291 Pfam PF00549 CoA-ligase 153 273 6.8E-19 T 28-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 APY29_RS05945 4e047656e35bacb2dc5b3b43148b7b36 291 PIRSF PIRSF001553 1 291 3.5E-130 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 APY29_RS05945 4e047656e35bacb2dc5b3b43148b7b36 291 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 238 251 - T 28-03-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site APY29_RS05945 4e047656e35bacb2dc5b3b43148b7b36 291 SUPERFAMILY SSF51735 1 124 1.66E-43 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS05945 4e047656e35bacb2dc5b3b43148b7b36 291 SUPERFAMILY SSF52210 125 290 4.45E-56 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 APY29_RS05945 4e047656e35bacb2dc5b3b43148b7b36 291 Gene3D G3DSA:3.40.50.261 122 291 4.4E-53 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 APY29_RS05945 4e047656e35bacb2dc5b3b43148b7b36 291 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 9.0E-37 T 28-03-2018 APY29_RS05945 4e047656e35bacb2dc5b3b43148b7b36 291 PRINTS PR01798 Succinyl-CoA synthase signature 242 259 9.0E-37 T 28-03-2018 APY29_RS05945 4e047656e35bacb2dc5b3b43148b7b36 291 PRINTS PR01798 Succinyl-CoA synthase signature 179 197 9.0E-37 T 28-03-2018 APY29_RS05945 4e047656e35bacb2dc5b3b43148b7b36 291 PRINTS PR01798 Succinyl-CoA synthase signature 210 223 9.0E-37 T 28-03-2018 APY29_RS05945 4e047656e35bacb2dc5b3b43148b7b36 291 Pfam PF02629 CoA binding domain 6 99 6.8E-31 T 28-03-2018 IPR003781 CoA-binding GO:0048037 APY29_RS05945 4e047656e35bacb2dc5b3b43148b7b36 291 Gene3D G3DSA:3.40.50.720 1 121 1.1E-45 T 28-03-2018 APY29_RS05945 4e047656e35bacb2dc5b3b43148b7b36 291 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 154 183 - T 28-03-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site APY29_RS05945 4e047656e35bacb2dc5b3b43148b7b36 291 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 289 8.3E-139 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 APY29_RS05945 4e047656e35bacb2dc5b3b43148b7b36 291 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 290 43.428 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 APY29_RS11490 096d272bcc034d09a410f45af4519f6b 729 Gene3D G3DSA:3.40.50.300 164 660 8.5E-28 T 28-03-2018 APY29_RS11490 096d272bcc034d09a410f45af4519f6b 729 Pfam PF12696 TraM recognition site of TraD and TraG 510 636 4.2E-10 T 28-03-2018 IPR032689 TraD/TraG, TraM recognition site APY29_RS11490 096d272bcc034d09a410f45af4519f6b 729 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 7 657 8.5E-267 T 28-03-2018 IPR022458 Conjugative coupling factor TraG/TraD APY29_RS11490 096d272bcc034d09a410f45af4519f6b 729 SUPERFAMILY SSF52540 146 344 1.77E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11490 096d272bcc034d09a410f45af4519f6b 729 SUPERFAMILY SSF52540 399 656 1.77E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11490 096d272bcc034d09a410f45af4519f6b 729 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 657 0.0 T 28-03-2018 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 APY29_RS10360 6be92d0616fe33382fdd255f28105bdf 447 Pfam PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase 276 439 5.9E-55 T 28-03-2018 IPR006855 Vertebrate-like NAGS Gcn5-related N-acetyltransferase (GNAT) domain KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|Reactome: R-HSA-70635 APY29_RS10360 6be92d0616fe33382fdd255f28105bdf 447 Gene3D G3DSA:3.40.630.30 297 447 1.5E-42 T 28-03-2018 APY29_RS10360 6be92d0616fe33382fdd255f28105bdf 447 Pfam PF00696 Amino acid kinase family 44 259 6.5E-31 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase APY29_RS10360 6be92d0616fe33382fdd255f28105bdf 447 Gene3D G3DSA:3.40.1160.10 1 296 1.0E-63 T 28-03-2018 APY29_RS10360 6be92d0616fe33382fdd255f28105bdf 447 SUPERFAMILY SSF55729 305 402 8.86E-6 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS10360 6be92d0616fe33382fdd255f28105bdf 447 PIRSF PIRSF036441 22 447 2.1E-290 T 28-03-2018 IPR011242 Acetylglutamate kinase ArgB GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 APY29_RS10360 6be92d0616fe33382fdd255f28105bdf 447 TIGRFAM TIGR00761 argB: acetylglutamate kinase 43 264 1.3E-60 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 APY29_RS10360 6be92d0616fe33382fdd255f28105bdf 447 SUPERFAMILY SSF53633 16 294 4.89E-53 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase APY29_RS03120 f517e26330e68f4b4559a36ee866450b 173 Pfam PF13420 Acetyltransferase (GNAT) domain 43 156 1.2E-18 T 28-03-2018 APY29_RS03120 f517e26330e68f4b4559a36ee866450b 173 Gene3D G3DSA:3.40.630.30 6 172 1.6E-33 T 28-03-2018 APY29_RS03120 f517e26330e68f4b4559a36ee866450b 173 SUPERFAMILY SSF55729 9 165 1.96E-32 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS06835 de62c29218d6821b61382ccd3e8e89f0 824 SUPERFAMILY SSF56645 123 359 5.37E-42 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APY29_RS06835 de62c29218d6821b61382ccd3e8e89f0 824 Pfam PF09317 Domain of unknown function (DUF1974) 518 801 1.4E-108 T 28-03-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 APY29_RS06835 de62c29218d6821b61382ccd3e8e89f0 824 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 364 509 4.4E-17 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APY29_RS06835 de62c29218d6821b61382ccd3e8e89f0 824 Gene3D G3DSA:1.10.540.10 79 239 9.3E-25 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 APY29_RS06835 de62c29218d6821b61382ccd3e8e89f0 824 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 141 236 6.3E-17 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 APY29_RS06835 de62c29218d6821b61382ccd3e8e89f0 824 Gene3D G3DSA:1.20.140.10 352 512 1.1E-25 T 28-03-2018 APY29_RS06835 de62c29218d6821b61382ccd3e8e89f0 824 Gene3D G3DSA:2.40.110.10 240 351 3.0E-14 T 28-03-2018 APY29_RS06835 de62c29218d6821b61382ccd3e8e89f0 824 SUPERFAMILY SSF47203 364 510 1.1E-25 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APY29_RS20980 a69d899dade081ed662c54be7914747a 585 PIRSF PIRSF006337 7 585 3.1E-221 T 28-03-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 APY29_RS20980 a69d899dade081ed662c54be7914747a 585 Gene3D G3DSA:2.60.40.1180 519 583 2.2E-11 T 28-03-2018 APY29_RS20980 a69d899dade081ed662c54be7914747a 585 Gene3D G3DSA:1.10.10.760 433 475 1.4E-15 T 28-03-2018 APY29_RS20980 a69d899dade081ed662c54be7914747a 585 Pfam PF00128 Alpha amylase, catalytic domain 126 213 7.9E-12 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS20980 a69d899dade081ed662c54be7914747a 585 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 21 552 9.6E-216 T 28-03-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 APY29_RS20980 a69d899dade081ed662c54be7914747a 585 SUPERFAMILY SSF81296 9 93 6.65E-18 T 28-03-2018 IPR014756 Immunoglobulin E-set APY29_RS20980 a69d899dade081ed662c54be7914747a 585 SMART SM00642 96 453 8.4E-8 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS20980 a69d899dade081ed662c54be7914747a 585 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 12 73 2.8E-4 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 APY29_RS20980 a69d899dade081ed662c54be7914747a 585 Gene3D G3DSA:2.60.40.10 7 100 9.0E-19 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS20980 a69d899dade081ed662c54be7914747a 585 Pfam PF11941 Domain of unknown function (DUF3459) 496 561 3.5E-9 T 28-03-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) APY29_RS20980 a69d899dade081ed662c54be7914747a 585 Gene3D G3DSA:3.20.20.80 101 429 1.4E-60 T 28-03-2018 APY29_RS20980 a69d899dade081ed662c54be7914747a 585 SUPERFAMILY SSF51445 95 506 5.98E-99 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 SMART SM00838 614 701 4.3E-54 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 Gene3D G3DSA:3.30.70.240 628 705 3.9E-30 T 28-03-2018 APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 SUPERFAMILY SSF52540 6 288 1.86E-107 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 SUPERFAMILY SSF54980 409 486 5.76E-26 T 28-03-2018 IPR035647 EF-G domain III/V-like APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 186 2.8E-32 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 Hamap MF_00054_B Elongation factor G [fusA]. 6 705 108.884 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 SUPERFAMILY SSF50447 310 407 1.19E-35 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 SUPERFAMILY SSF50447 255 281 1.19E-35 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 Pfam PF03144 Elongation factor Tu domain 2 329 396 1.8E-18 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 Gene3D G3DSA:3.30.70.870 405 496 4.8E-37 T 28-03-2018 APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 SMART SM00889 485 612 1.9E-68 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 Gene3D G3DSA:3.40.50.300 1 282 7.5E-56 T 28-03-2018 APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 SUPERFAMILY SSF54980 617 703 1.92E-28 T 28-03-2018 IPR035647 EF-G domain III/V-like APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 Gene3D G3DSA:2.40.30.10 283 404 1.1E-31 T 28-03-2018 APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 Pfam PF03764 Elongation factor G, domain IV 484 612 2.0E-42 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 704 0.0 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 Pfam PF14492 Elongation Factor G, domain II 409 483 3.2E-35 T 28-03-2018 APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 2.5E-65 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 Gene3D G3DSA:3.30.230.10 497 627 1.9E-41 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.8E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.8E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.8E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.8E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.8E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 Pfam PF00679 Elongation factor G C-terminus 614 700 8.3E-29 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like APY29_RS18070 462adb51d642523c4da9a111af7f5407 705 SUPERFAMILY SSF54211 484 613 7.59E-40 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS06730 4acf6fb1339dd617bcbe8f3ecffbe5c2 828 Gene3D G3DSA:2.60.40.10 166 276 8.6E-16 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS06730 4acf6fb1339dd617bcbe8f3ecffbe5c2 828 SUPERFAMILY SSF49303 169 277 1.37E-18 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APY29_RS06730 4acf6fb1339dd617bcbe8f3ecffbe5c2 828 Gene3D G3DSA:2.60.120.260 1 165 6.0E-39 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS06730 4acf6fb1339dd617bcbe8f3ecffbe5c2 828 SUPERFAMILY SSF49303 641 733 9.78E-13 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APY29_RS06730 4acf6fb1339dd617bcbe8f3ecffbe5c2 828 Gene3D G3DSA:3.20.20.80 277 630 3.2E-84 T 28-03-2018 APY29_RS06730 4acf6fb1339dd617bcbe8f3ecffbe5c2 828 Pfam PF00703 Glycosyl hydrolases family 2 169 278 1.8E-8 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APY29_RS06730 4acf6fb1339dd617bcbe8f3ecffbe5c2 828 Gene3D G3DSA:2.60.40.10 730 820 4.8E-23 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS06730 4acf6fb1339dd617bcbe8f3ecffbe5c2 828 Gene3D G3DSA:2.60.40.10 631 727 1.3E-17 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS06730 4acf6fb1339dd617bcbe8f3ecffbe5c2 828 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 294 434 9.8E-5 T 28-03-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 APY29_RS06730 4acf6fb1339dd617bcbe8f3ecffbe5c2 828 SUPERFAMILY SSF51445 276 632 2.57E-107 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS06730 4acf6fb1339dd617bcbe8f3ecffbe5c2 828 SUPERFAMILY SSF49303 735 811 1.29E-17 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APY29_RS06730 4acf6fb1339dd617bcbe8f3ecffbe5c2 828 SUPERFAMILY SSF49785 1 167 1.56E-45 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS06380 2a6122e543bf68d835d8a921643cffcd 272 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 145 262 2.4E-40 T 28-03-2018 IPR014162 Cell division coordinator CpoB, C-terminal APY29_RS06380 2a6122e543bf68d835d8a921643cffcd 272 Pfam PF13525 Outer membrane lipoprotein 144 266 2.4E-13 T 28-03-2018 APY29_RS06380 2a6122e543bf68d835d8a921643cffcd 272 Gene3D G3DSA:1.25.40.10 146 272 2.7E-20 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS06380 2a6122e543bf68d835d8a921643cffcd 272 SUPERFAMILY SSF48452 144 259 9.28E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS06380 2a6122e543bf68d835d8a921643cffcd 272 Pfam PF16331 TolA binding protein trimerisation 26 99 1.2E-18 T 28-03-2018 IPR032519 YbgF, trimerisation domain GO:0070206 APY29_RS06380 2a6122e543bf68d835d8a921643cffcd 272 Gene3D G3DSA:1.20.5.320 21 104 7.5E-5 T 28-03-2018 APY29_RS06380 2a6122e543bf68d835d8a921643cffcd 272 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 2 265 19.784 T 28-03-2018 IPR034706 Cell division coordinator CpoB GO:0051301 APY29_RS20420 bb1dd625bb2efa7afd008560a9e12977 148 Gene3D G3DSA:3.40.50.9100 1 147 6.2E-64 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 APY29_RS20420 bb1dd625bb2efa7afd008560a9e12977 148 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 28-03-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 APY29_RS20420 bb1dd625bb2efa7afd008560a9e12977 148 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 148 71.556 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 APY29_RS20420 bb1dd625bb2efa7afd008560a9e12977 148 SUPERFAMILY SSF52304 3 145 9.03E-59 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 APY29_RS20420 bb1dd625bb2efa7afd008560a9e12977 148 PIRSF PIRSF001399 1 147 7.2E-56 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 APY29_RS20420 bb1dd625bb2efa7afd008560a9e12977 148 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 142 1.3E-54 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 APY29_RS20420 bb1dd625bb2efa7afd008560a9e12977 148 Pfam PF01220 Dehydroquinase class II 4 140 5.3E-57 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 APY29_RS20420 bb1dd625bb2efa7afd008560a9e12977 148 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 18 142 5.0E-67 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 APY29_RS19820 c08571248805156431c09d58e710d5be 284 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 10 284 35.916 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 APY29_RS19820 c08571248805156431c09d58e710d5be 284 Gene3D G3DSA:3.10.310.10 1 133 4.1E-44 T 28-03-2018 APY29_RS19820 c08571248805156431c09d58e710d5be 284 Gene3D G3DSA:3.10.310.10 134 271 2.1E-48 T 28-03-2018 APY29_RS19820 c08571248805156431c09d58e710d5be 284 SUPERFAMILY SSF54506 10 139 4.71E-40 T 28-03-2018 APY29_RS19820 c08571248805156431c09d58e710d5be 284 Pfam PF01678 Diaminopimelate epimerase 162 277 2.4E-26 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 APY29_RS19820 c08571248805156431c09d58e710d5be 284 Pfam PF01678 Diaminopimelate epimerase 12 132 7.5E-24 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 APY29_RS19820 c08571248805156431c09d58e710d5be 284 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 73 87 - T 28-03-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 APY29_RS19820 c08571248805156431c09d58e710d5be 284 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 11 282 3.3E-78 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 APY29_RS19820 c08571248805156431c09d58e710d5be 284 SUPERFAMILY SSF54506 149 283 2.2E-47 T 28-03-2018 APY29_RS23315 d344506a5ec8127d94dcc663010107fe 264 Pfam PF01694 Rhomboid family 61 198 3.1E-19 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APY29_RS23315 d344506a5ec8127d94dcc663010107fe 264 Gene3D G3DSA:1.20.1540.10 19 199 3.1E-18 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APY29_RS23315 d344506a5ec8127d94dcc663010107fe 264 SUPERFAMILY SSF144091 21 201 3.66E-26 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APY29_RS06170 61cb08c5caaa0c44e82b4e2deef70cf7 398 SUPERFAMILY SSF103473 2 389 1.31E-35 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS06170 61cb08c5caaa0c44e82b4e2deef70cf7 398 Gene3D G3DSA:1.20.1250.20 210 397 2.7E-14 T 28-03-2018 APY29_RS06170 61cb08c5caaa0c44e82b4e2deef70cf7 398 Gene3D G3DSA:1.20.1250.20 1 191 7.4E-18 T 28-03-2018 APY29_RS06170 61cb08c5caaa0c44e82b4e2deef70cf7 398 Pfam PF07690 Major Facilitator Superfamily 21 269 6.1E-15 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS07500 2733e2dce10082c58cbaff8ebdf34b4e 180 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 10 178 5.8E-50 T 28-03-2018 IPR006286 Peptidase C56, PfpI APY29_RS07500 2733e2dce10082c58cbaff8ebdf34b4e 180 Gene3D G3DSA:3.40.50.880 1 180 2.5E-46 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS07500 2733e2dce10082c58cbaff8ebdf34b4e 180 SUPERFAMILY SSF52317 7 178 3.11E-47 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS07500 2733e2dce10082c58cbaff8ebdf34b4e 180 Pfam PF01965 DJ-1/PfpI family 8 176 1.5E-49 T 28-03-2018 IPR002818 DJ-1/PfpI APY29_RS04050 6e2e39bee221e154a8fb4f49b2ce1c5d 160 Gene3D G3DSA:3.30.450.40 10 160 1.0E-27 T 28-03-2018 IPR029016 GAF domain-like APY29_RS04050 6e2e39bee221e154a8fb4f49b2ce1c5d 160 SUPERFAMILY SSF55781 13 159 3.34E-42 T 28-03-2018 IPR029016 GAF domain-like APY29_RS04050 6e2e39bee221e154a8fb4f49b2ce1c5d 160 SMART SM00065 31 160 0.0047 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS04050 6e2e39bee221e154a8fb4f49b2ce1c5d 160 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 98 115 - T 28-03-2018 IPR000614 Free Met sulfoxide reductase conserved site APY29_RS04050 6e2e39bee221e154a8fb4f49b2ce1c5d 160 Pfam PF13185 GAF domain 53 159 1.3E-11 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS18755 9d4b72d56dfbae268503e658b3b44d03 248 Gene3D G3DSA:3.40.50.2300 7 140 6.2E-37 T 28-03-2018 APY29_RS18755 9d4b72d56dfbae268503e658b3b44d03 248 Pfam PF00072 Response regulator receiver domain 22 132 1.3E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS18755 9d4b72d56dfbae268503e658b3b44d03 248 SMART SM00448 20 132 3.1E-41 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS18755 9d4b72d56dfbae268503e658b3b44d03 248 Gene3D G3DSA:1.10.10.10 141 245 1.0E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS18755 9d4b72d56dfbae268503e658b3b44d03 248 Pfam PF00486 Transcriptional regulatory protein, C terminal 166 240 1.7E-17 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS18755 9d4b72d56dfbae268503e658b3b44d03 248 SMART SM00862 166 240 6.3E-16 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS18755 9d4b72d56dfbae268503e658b3b44d03 248 SUPERFAMILY SSF52172 19 145 1.99E-40 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS18755 9d4b72d56dfbae268503e658b3b44d03 248 SUPERFAMILY SSF46894 141 240 8.79E-22 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS17460 1fe6a1bef92ce8a5ec68cae85327a340 177 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 12 176 2.9E-27 T 28-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 APY29_RS17460 1fe6a1bef92ce8a5ec68cae85327a340 177 PIRSF PIRSF004982 1 177 2.9E-51 T 28-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 APY29_RS17460 1fe6a1bef92ce8a5ec68cae85327a340 177 Pfam PF03843 Outer membrane lipoprotein Slp family 15 162 1.0E-44 T 28-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 APY29_RS17970 7cdf57728322e036d4ea46c3006cb413 180 Pfam PF03719 Ribosomal protein S5, C-terminal domain 102 170 5.5E-28 T 28-03-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 APY29_RS17970 7cdf57728322e036d4ea46c3006cb413 180 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 24 176 6.4E-64 T 28-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 APY29_RS17970 7cdf57728322e036d4ea46c3006cb413 180 SUPERFAMILY SSF54768 22 89 1.57E-20 T 28-03-2018 APY29_RS17970 7cdf57728322e036d4ea46c3006cb413 180 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 176 33.995 T 28-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 APY29_RS17970 7cdf57728322e036d4ea46c3006cb413 180 Gene3D G3DSA:3.30.230.10 89 179 1.5E-31 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APY29_RS17970 7cdf57728322e036d4ea46c3006cb413 180 Pfam PF00333 Ribosomal protein S5, N-terminal domain 26 87 4.2E-25 T 28-03-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 APY29_RS17970 7cdf57728322e036d4ea46c3006cb413 180 Gene3D G3DSA:3.30.160.20 24 84 7.2E-23 T 28-03-2018 APY29_RS17970 7cdf57728322e036d4ea46c3006cb413 180 SUPERFAMILY SSF54211 92 172 9.1E-25 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS17970 7cdf57728322e036d4ea46c3006cb413 180 ProSitePatterns PS00585 Ribosomal protein S5 signature. 41 73 - T 28-03-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site APY29_RS15675 572f6439717c83beb64e6fe8e9533410 257 Gene3D G3DSA:3.40.1180.10 3 245 1.4E-88 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 APY29_RS15675 572f6439717c83beb64e6fe8e9533410 257 Pfam PF01255 Putative undecaprenyl diphosphate synthase 21 241 9.3E-76 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 APY29_RS15675 572f6439717c83beb64e6fe8e9533410 257 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 14 241 4.4E-85 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 APY29_RS15675 572f6439717c83beb64e6fe8e9533410 257 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 14 242 39.772 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 APY29_RS15675 572f6439717c83beb64e6fe8e9533410 257 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 187 204 - T 28-03-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199 APY29_RS15675 572f6439717c83beb64e6fe8e9533410 257 SUPERFAMILY SSF64005 14 237 4.97E-83 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 APY29_RS09690 53c12b27ae59d21f1e4aeb0f2095f8fc 328 Gene3D G3DSA:1.10.3210.10 127 323 1.5E-42 T 28-03-2018 APY29_RS09690 53c12b27ae59d21f1e4aeb0f2095f8fc 328 SUPERFAMILY SSF109604 146 314 6.6E-35 T 28-03-2018 APY29_RS09690 53c12b27ae59d21f1e4aeb0f2095f8fc 328 Pfam PF13487 HD domain 202 264 2.3E-17 T 28-03-2018 APY29_RS09690 53c12b27ae59d21f1e4aeb0f2095f8fc 328 SUPERFAMILY SSF52172 3 131 1.85E-33 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS09690 53c12b27ae59d21f1e4aeb0f2095f8fc 328 Gene3D G3DSA:3.40.50.2300 2 126 2.0E-30 T 28-03-2018 APY29_RS09690 53c12b27ae59d21f1e4aeb0f2095f8fc 328 SMART SM00471 146 283 6.6E-7 T 28-03-2018 IPR003607 HD/PDEase domain APY29_RS09690 53c12b27ae59d21f1e4aeb0f2095f8fc 328 SMART SM00448 4 116 3.6E-33 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS09690 53c12b27ae59d21f1e4aeb0f2095f8fc 328 Pfam PF00072 Response regulator receiver domain 7 116 4.7E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS09865 c672b6589b0f1c10cd3781e6210ad87f 484 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 36 478 73.281 T 28-03-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 APY29_RS09865 c672b6589b0f1c10cd3781e6210ad87f 484 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 184 204 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 APY29_RS09865 c672b6589b0f1c10cd3781e6210ad87f 484 Pfam PF04055 Radical SAM superfamily 184 363 1.9E-27 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 APY29_RS09865 c672b6589b0f1c10cd3781e6210ad87f 484 Pfam PF00919 Uncharacterized protein family UPF0004 37 137 6.3E-30 T 28-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 APY29_RS09865 c672b6589b0f1c10cd3781e6210ad87f 484 SUPERFAMILY SSF102114 162 409 6.41E-59 T 28-03-2018 APY29_RS09865 c672b6589b0f1c10cd3781e6210ad87f 484 Pfam PF01938 TRAM domain 416 477 1.0E-19 T 28-03-2018 IPR002792 TRAM domain APY29_RS09865 c672b6589b0f1c10cd3781e6210ad87f 484 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 37 477 5.1E-180 T 28-03-2018 APY29_RS09865 c672b6589b0f1c10cd3781e6210ad87f 484 SMART SM00729 180 405 3.9E-58 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APY29_RS09865 c672b6589b0f1c10cd3781e6210ad87f 484 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 37 475 2.2E-147 T 28-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 APY29_RS09865 c672b6589b0f1c10cd3781e6210ad87f 484 Gene3D G3DSA:3.80.30.20 177 419 2.2E-50 T 28-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe APY29_RS19785 3948a2ba04c74a3b7fc5217b3e064aae 362 SUPERFAMILY SSF111369 206 283 7.45E-12 T 28-03-2018 APY29_RS19785 3948a2ba04c74a3b7fc5217b3e064aae 362 Gene3D G3DSA:1.10.287.470 134 196 7.0E-7 T 28-03-2018 APY29_RS19785 3948a2ba04c74a3b7fc5217b3e064aae 362 SUPERFAMILY SSF111369 64 138 4.32E-11 T 28-03-2018 APY29_RS19785 3948a2ba04c74a3b7fc5217b3e064aae 362 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 306 3.4E-15 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APY29_RS19785 3948a2ba04c74a3b7fc5217b3e064aae 362 Gene3D G3DSA:2.40.50.100 62 133 9.6E-17 T 28-03-2018 APY29_RS19785 3948a2ba04c74a3b7fc5217b3e064aae 362 Gene3D G3DSA:1.20.1600.10 200 332 8.3E-16 T 28-03-2018 APY29_RS19785 3948a2ba04c74a3b7fc5217b3e064aae 362 SUPERFAMILY SSF111369 134 191 3.92E-5 T 28-03-2018 APY29_RS19835 9e070a9b5643e108f4826988e8a763b1 702 Gene3D G3DSA:3.40.50.1820 11 129 4.8E-25 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS19835 9e070a9b5643e108f4826988e8a763b1 702 SUPERFAMILY SSF50993 22 431 1.6E-83 T 28-03-2018 APY29_RS19835 9e070a9b5643e108f4826988e8a763b1 702 Pfam PF00326 Prolyl oligopeptidase family 490 700 2.9E-66 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APY29_RS19835 9e070a9b5643e108f4826988e8a763b1 702 Gene3D G3DSA:3.40.50.1820 223 702 6.6E-65 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS19835 9e070a9b5643e108f4826988e8a763b1 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 553 573 1.1E-45 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APY29_RS19835 9e070a9b5643e108f4826988e8a763b1 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 523 542 1.1E-45 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APY29_RS19835 9e070a9b5643e108f4826988e8a763b1 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 495 519 1.1E-45 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APY29_RS19835 9e070a9b5643e108f4826988e8a763b1 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 611 626 1.1E-45 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APY29_RS19835 9e070a9b5643e108f4826988e8a763b1 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 469 487 1.1E-45 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APY29_RS19835 9e070a9b5643e108f4826988e8a763b1 702 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 629 651 1.1E-45 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APY29_RS19835 9e070a9b5643e108f4826988e8a763b1 702 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 26 427 4.4E-114 T 28-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 APY29_RS19835 9e070a9b5643e108f4826988e8a763b1 702 SUPERFAMILY SSF53474 437 686 8.47E-42 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS01725 3cffa8b130037f0122a57412a6596f4e 661 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 58 551 4.7E-177 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 APY29_RS01725 3cffa8b130037f0122a57412a6596f4e 661 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 244 250 - T 28-03-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 APY29_RS01725 3cffa8b130037f0122a57412a6596f4e 661 SUPERFAMILY SSF55347 244 549 2.98E-110 T 28-03-2018 APY29_RS01725 3cffa8b130037f0122a57412a6596f4e 661 Gene3D G3DSA:3.40.50.720 56 255 1.3E-59 T 28-03-2018 APY29_RS01725 3cffa8b130037f0122a57412a6596f4e 661 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 304 320 4.8E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 APY29_RS01725 3cffa8b130037f0122a57412a6596f4e 661 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 210 223 4.8E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 APY29_RS01725 3cffa8b130037f0122a57412a6596f4e 661 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 391 417 4.8E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 APY29_RS01725 3cffa8b130037f0122a57412a6596f4e 661 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 234 262 4.8E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 APY29_RS01725 3cffa8b130037f0122a57412a6596f4e 661 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 286 303 4.8E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 APY29_RS01725 3cffa8b130037f0122a57412a6596f4e 661 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 58 552 77.625 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 APY29_RS01725 3cffa8b130037f0122a57412a6596f4e 661 Gene3D G3DSA:3.30.360.10 256 553 2.6E-119 T 28-03-2018 APY29_RS01725 3cffa8b130037f0122a57412a6596f4e 661 SUPERFAMILY SSF51735 49 257 7.28E-55 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS01725 3cffa8b130037f0122a57412a6596f4e 661 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 62 254 7.6E-55 T 28-03-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 APY29_RS01725 3cffa8b130037f0122a57412a6596f4e 661 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 256 550 2.4E-107 T 28-03-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 APY29_RS10305 2e7df0206cb01143883925481ee48dec 449 Gene3D G3DSA:3.20.20.140 71 395 1.0E-97 T 28-03-2018 APY29_RS10305 2e7df0206cb01143883925481ee48dec 449 SUPERFAMILY SSF51556 55 377 1.14E-90 T 28-03-2018 IPR032466 Metal-dependent hydrolase APY29_RS10305 2e7df0206cb01143883925481ee48dec 449 Gene3D G3DSA:2.30.40.10 1 70 9.7E-20 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS10305 2e7df0206cb01143883925481ee48dec 449 Pfam PF01979 Amidohydrolase family 51 430 2.1E-19 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 APY29_RS10305 2e7df0206cb01143883925481ee48dec 449 SUPERFAMILY SSF51338 1 54 1.03E-30 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS10305 2e7df0206cb01143883925481ee48dec 449 SUPERFAMILY SSF51338 377 440 1.03E-30 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS10305 2e7df0206cb01143883925481ee48dec 449 ProSitePatterns PS00483 Dihydroorotase signature 2. 313 324 - T 28-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APY29_RS08485 a0d7408ac61828f089687ed3bcc5cf8c 283 SUPERFAMILY SSF52540 24 269 9.29E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS08485 a0d7408ac61828f089687ed3bcc5cf8c 283 Gene3D G3DSA:3.40.50.300 9 243 9.0E-63 T 28-03-2018 APY29_RS08485 a0d7408ac61828f089687ed3bcc5cf8c 283 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 264 1.2E-100 T 28-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 APY29_RS08485 a0d7408ac61828f089687ed3bcc5cf8c 283 Hamap MF_02040 Iron-sulfur cluster carrier protein. 10 269 37.378 T 28-03-2018 IPR019591 Mrp/NBP35 ATP-binding protein APY29_RS08485 a0d7408ac61828f089687ed3bcc5cf8c 283 ProSitePatterns PS01215 Mrp family signature. 128 144 - T 28-03-2018 IPR000808 Mrp, conserved site GO:0005524 APY29_RS22595 d8165af390699ebd8ba08c22fb6a3548 357 Gene3D G3DSA:3.40.50.2300 68 188 1.4E-29 T 28-03-2018 APY29_RS22595 d8165af390699ebd8ba08c22fb6a3548 357 Pfam PF13377 Periplasmic binding protein-like domain 182 345 3.9E-38 T 28-03-2018 APY29_RS22595 d8165af390699ebd8ba08c22fb6a3548 357 ProSitePatterns PS00356 LacI-type HTH domain signature. 17 35 - T 28-03-2018 APY29_RS22595 d8165af390699ebd8ba08c22fb6a3548 357 SMART SM00354 14 84 1.7E-26 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS22595 d8165af390699ebd8ba08c22fb6a3548 357 SUPERFAMILY SSF53822 75 348 2.02E-67 T 28-03-2018 IPR028082 Periplasmic binding protein-like I APY29_RS22595 d8165af390699ebd8ba08c22fb6a3548 357 Gene3D G3DSA:3.40.50.2300 189 320 1.9E-46 T 28-03-2018 APY29_RS22595 d8165af390699ebd8ba08c22fb6a3548 357 Pfam PF00356 Bacterial regulatory proteins, lacI family 16 61 4.0E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS22595 d8165af390699ebd8ba08c22fb6a3548 357 Gene3D G3DSA:1.10.260.40 15 67 1.2E-20 T 28-03-2018 APY29_RS22595 d8165af390699ebd8ba08c22fb6a3548 357 SUPERFAMILY SSF47413 14 72 6.57E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APY29_RS17590 2c128ea3883018a99fa3f1d6fdbbddc8 90 SMART SM00411 1 90 4.5E-45 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APY29_RS17590 2c128ea3883018a99fa3f1d6fdbbddc8 90 SUPERFAMILY SSF47729 1 90 2.65E-33 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APY29_RS17590 2c128ea3883018a99fa3f1d6fdbbddc8 90 Gene3D G3DSA:4.10.520.10 1 90 5.1E-36 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APY29_RS17590 2c128ea3883018a99fa3f1d6fdbbddc8 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.8E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APY29_RS17590 2c128ea3883018a99fa3f1d6fdbbddc8 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.8E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APY29_RS17590 2c128ea3883018a99fa3f1d6fdbbddc8 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.8E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APY29_RS17590 2c128ea3883018a99fa3f1d6fdbbddc8 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 APY29_RS17590 2c128ea3883018a99fa3f1d6fdbbddc8 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.9E-35 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APY29_RS19085 114ca1993d8b4b16a4e4db23038adbee 151 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 4 128 6.0E-69 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 APY29_RS19085 114ca1993d8b4b16a4e4db23038adbee 151 SUPERFAMILY SSF89447 3 139 4.34E-36 T 28-03-2018 APY29_RS19085 114ca1993d8b4b16a4e4db23038adbee 151 Pfam PF02381 MraZ protein, putative antitoxin-like 88 136 3.0E-12 T 28-03-2018 IPR020603 MraZ domain APY29_RS19085 114ca1993d8b4b16a4e4db23038adbee 151 Pfam PF02381 MraZ protein, putative antitoxin-like 5 78 3.0E-8 T 28-03-2018 IPR020603 MraZ domain APY29_RS19085 114ca1993d8b4b16a4e4db23038adbee 151 Gene3D G3DSA:2.10.260.10 83 135 2.5E-8 T 28-03-2018 APY29_RS19085 114ca1993d8b4b16a4e4db23038adbee 151 Gene3D G3DSA:2.10.260.10 5 43 0.049 T 28-03-2018 APY29_RS19085 114ca1993d8b4b16a4e4db23038adbee 151 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 151 40.772 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 APY29_RS19085 114ca1993d8b4b16a4e4db23038adbee 151 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 5 149 4.7E-29 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 APY29_RS08935 a3c53659eddd3df993cfde4627194126 135 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 1.2E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS08935 a3c53659eddd3df993cfde4627194126 135 Gene3D G3DSA:3.30.700.10 11 134 6.4E-22 T 28-03-2018 APY29_RS08935 a3c53659eddd3df993cfde4627194126 135 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 31 6.7E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS08935 a3c53659eddd3df993cfde4627194126 135 SUPERFAMILY SSF54523 11 124 1.2E-22 T 28-03-2018 APY29_RS08935 a3c53659eddd3df993cfde4627194126 135 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS08935 a3c53659eddd3df993cfde4627194126 135 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 32 117 4.1E-23 T 28-03-2018 IPR031982 Type IV minor pilin ComP APY29_RS08015 244a45efb707091a8e64a625bcb577ed 361 Pfam PF00107 Zinc-binding dehydrogenase 176 303 1.5E-26 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APY29_RS08015 244a45efb707091a8e64a625bcb577ed 361 SMART SM00829 11 343 6.8E-7 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APY29_RS08015 244a45efb707091a8e64a625bcb577ed 361 Gene3D G3DSA:3.40.50.10730 155 311 3.2E-38 T 28-03-2018 APY29_RS08015 244a45efb707091a8e64a625bcb577ed 361 SUPERFAMILY SSF51735 138 310 2.35E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS08015 244a45efb707091a8e64a625bcb577ed 361 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 APY29_RS08015 244a45efb707091a8e64a625bcb577ed 361 SUPERFAMILY SSF50129 1 167 6.83E-48 T 28-03-2018 IPR011032 GroES-like APY29_RS08015 244a45efb707091a8e64a625bcb577ed 361 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 132 2.7E-30 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APY29_RS08015 244a45efb707091a8e64a625bcb577ed 361 Gene3D G3DSA:3.90.180.10 1 154 6.8E-45 T 28-03-2018 APY29_RS06485 603fb6d7a577ac57769c4b70128f814d 344 Gene3D G3DSA:3.30.420.40 18 133 5.6E-14 T 28-03-2018 APY29_RS06485 603fb6d7a577ac57769c4b70128f814d 344 SUPERFAMILY SSF53067 22 341 6.41E-49 T 28-03-2018 APY29_RS06485 603fb6d7a577ac57769c4b70128f814d 344 Pfam PF02685 Glucokinase 23 338 3.9E-99 T 28-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 APY29_RS06485 603fb6d7a577ac57769c4b70128f814d 344 Gene3D G3DSA:3.40.367.20 134 322 3.0E-30 T 28-03-2018 APY29_RS22175 38f9b8e367e005c742eb70dfa3636e7f 215 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 102 112 - T 28-03-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 APY29_RS22175 38f9b8e367e005c742eb70dfa3636e7f 215 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 180 206 6.2E-8 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 APY29_RS22175 38f9b8e367e005c742eb70dfa3636e7f 215 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 102 124 6.2E-8 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 APY29_RS22175 38f9b8e367e005c742eb70dfa3636e7f 215 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 139 148 6.2E-8 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 APY29_RS22175 38f9b8e367e005c742eb70dfa3636e7f 215 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 69 205 3.4E-44 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 APY29_RS22175 38f9b8e367e005c742eb70dfa3636e7f 215 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 194 205 - T 28-03-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 APY29_RS22175 38f9b8e367e005c742eb70dfa3636e7f 215 Gene3D G3DSA:2.60.40.200 51 215 4.4E-43 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 APY29_RS22175 38f9b8e367e005c742eb70dfa3636e7f 215 SUPERFAMILY SSF49329 64 205 3.4E-43 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 APY29_RS13410 dd21c339b43a5fc2684e18aa2ec663ae 618 Gene3D G3DSA:3.40.390.10 45 205 5.7E-7 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APY29_RS13410 dd21c339b43a5fc2684e18aa2ec663ae 618 Pfam PF13387 Domain of unknown function (DUF4105) 234 400 1.7E-29 T 28-03-2018 IPR025178 Domain of unknown function DUF4105 APY29_RS03055 64c33b485e84659811728f7d9e84b948 381 Gene3D G3DSA:1.10.10.10 301 379 1.1E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS03055 64c33b485e84659811728f7d9e84b948 381 Pfam PF02481 DNA recombination-mediator protein A 73 279 8.1E-74 T 28-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 APY29_RS03055 64c33b485e84659811728f7d9e84b948 381 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 71 287 1.6E-73 T 28-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 APY29_RS03055 64c33b485e84659811728f7d9e84b948 381 Gene3D G3DSA:3.40.50.450 115 263 3.5E-36 T 28-03-2018 APY29_RS03055 64c33b485e84659811728f7d9e84b948 381 SUPERFAMILY SSF102405 83 289 2.29E-39 T 28-03-2018 APY29_RS20925 f76008964c55ac2ac6bec3b3c8540e82 205 Gene3D G3DSA:1.10.357.10 69 204 8.1E-13 T 28-03-2018 APY29_RS20925 f76008964c55ac2ac6bec3b3c8540e82 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 65 3.5E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS20925 f76008964c55ac2ac6bec3b3c8540e82 205 Gene3D G3DSA:1.10.10.60 1 68 5.3E-12 T 28-03-2018 APY29_RS20925 f76008964c55ac2ac6bec3b3c8540e82 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 4.0E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS20925 f76008964c55ac2ac6bec3b3c8540e82 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 4.0E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS20925 f76008964c55ac2ac6bec3b3c8540e82 205 SUPERFAMILY SSF48498 90 200 8.9E-10 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APY29_RS20925 f76008964c55ac2ac6bec3b3c8540e82 205 SUPERFAMILY SSF46689 12 95 1.03E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS16190 b35f7816d1ed04f3274c487b802edbea 693 SUPERFAMILY SSF52096 10 305 6.27E-67 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS16190 b35f7816d1ed04f3274c487b802edbea 693 Gene3D G3DSA:1.10.1040.10 495 591 9.4E-17 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APY29_RS16190 b35f7816d1ed04f3274c487b802edbea 693 SUPERFAMILY SSF48179 495 595 3.06E-22 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APY29_RS16190 b35f7816d1ed04f3274c487b802edbea 693 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 207 2.2E-38 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APY29_RS16190 b35f7816d1ed04f3274c487b802edbea 693 SUPERFAMILY SSF48179 603 681 2.13E-17 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APY29_RS16190 b35f7816d1ed04f3274c487b802edbea 693 SUPERFAMILY SSF51735 316 495 1.55E-43 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS16190 b35f7816d1ed04f3274c487b802edbea 693 Gene3D G3DSA:3.90.226.10 7 210 1.6E-59 T 28-03-2018 APY29_RS16190 b35f7816d1ed04f3274c487b802edbea 693 Gene3D G3DSA:1.10.1040.10 606 693 1.5E-14 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APY29_RS16190 b35f7816d1ed04f3274c487b802edbea 693 Gene3D G3DSA:3.40.50.720 259 494 3.5E-49 T 28-03-2018 APY29_RS16190 b35f7816d1ed04f3274c487b802edbea 693 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 319 491 3.3E-46 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 APY29_RS16190 b35f7816d1ed04f3274c487b802edbea 693 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 586 3.5E-16 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 APY29_RS16190 b35f7816d1ed04f3274c487b802edbea 693 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 608 680 2.2E-4 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 APY29_RS00005 c94325a618248c3b96674909cb1857d8 442 SUPERFAMILY SSF48295 339 441 1.62E-35 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 APY29_RS00005 c94325a618248c3b96674909cb1857d8 442 SMART SM00760 350 419 1.6E-39 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APY29_RS00005 c94325a618248c3b96674909cb1857d8 442 Pfam PF00308 Bacterial dnaA protein 106 324 1.2E-84 T 28-03-2018 IPR013317 Chromosomal replication initiator protein DnaA APY29_RS00005 c94325a618248c3b96674909cb1857d8 442 SMART SM00382 139 270 1.4E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS00005 c94325a618248c3b96674909cb1857d8 442 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 4 440 2.0E-165 T 28-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APY29_RS00005 c94325a618248c3b96674909cb1857d8 442 SUPERFAMILY SSF52540 107 318 1.44E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS00005 c94325a618248c3b96674909cb1857d8 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 172 186 4.0E-46 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like APY29_RS00005 c94325a618248c3b96674909cb1857d8 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 204 218 4.0E-46 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like APY29_RS00005 c94325a618248c3b96674909cb1857d8 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 140 160 4.0E-46 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like APY29_RS00005 c94325a618248c3b96674909cb1857d8 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 400 419 4.0E-46 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like APY29_RS00005 c94325a618248c3b96674909cb1857d8 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 238 265 4.0E-46 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like APY29_RS00005 c94325a618248c3b96674909cb1857d8 442 Gene3D G3DSA:3.40.50.300 103 271 8.7E-18 T 28-03-2018 APY29_RS00005 c94325a618248c3b96674909cb1857d8 442 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 441 32.002 T 28-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APY29_RS00005 c94325a618248c3b96674909cb1857d8 442 Pfam PF11638 DnaA N-terminal domain 1 62 2.8E-14 T 28-03-2018 IPR024633 DnaA N-terminal domain APY29_RS00005 c94325a618248c3b96674909cb1857d8 442 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 353 419 6.8E-30 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APY29_RS00005 c94325a618248c3b96674909cb1857d8 442 Gene3D G3DSA:1.10.8.60 273 343 1.1E-26 T 28-03-2018 APY29_RS00005 c94325a618248c3b96674909cb1857d8 442 ProSitePatterns PS01008 DnaA protein signature. 400 419 - T 28-03-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APY29_RS00005 c94325a618248c3b96674909cb1857d8 442 Gene3D G3DSA:1.10.1750.10 344 441 1.0E-33 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APY29_RS08760 ab5bec21ebaf9c3ea038e7b03e1376b6 175 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 26 174 1.5E-58 T 28-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08760 ab5bec21ebaf9c3ea038e7b03e1376b6 175 Gene3D G3DSA:3.40.30.10 92 174 4.1E-11 T 28-03-2018 APY29_RS08760 ab5bec21ebaf9c3ea038e7b03e1376b6 175 SUPERFAMILY SSF52833 20 174 4.7E-46 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS08760 ab5bec21ebaf9c3ea038e7b03e1376b6 175 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 28 174 1.1E-45 T 28-03-2018 APY29_RS08760 ab5bec21ebaf9c3ea038e7b03e1376b6 175 PIRSF PIRSF000216 4 175 5.9E-52 T 28-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS11840 8c721074d17808d3e2701861538990d3 328 SUPERFAMILY SSF55120 97 327 3.52E-56 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS11840 8c721074d17808d3e2701861538990d3 328 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 24 326 1.3E-73 T 28-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS11840 8c721074d17808d3e2701861538990d3 328 Pfam PF01479 S4 domain 28 74 9.3E-9 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS11840 8c721074d17808d3e2701861538990d3 328 Pfam PF00849 RNA pseudouridylate synthase 109 262 4.8E-27 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS11840 8c721074d17808d3e2701861538990d3 328 Gene3D G3DSA:3.30.2350.10 99 328 3.2E-59 T 28-03-2018 APY29_RS11840 8c721074d17808d3e2701861538990d3 328 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 146 160 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS11840 8c721074d17808d3e2701861538990d3 328 SMART SM00363 28 90 1.5E-6 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS11840 8c721074d17808d3e2701861538990d3 328 SUPERFAMILY SSF55174 27 78 7.23E-9 T 28-03-2018 APY29_RS11840 8c721074d17808d3e2701861538990d3 328 Gene3D G3DSA:3.10.290.10 17 84 9.1E-14 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS05595 24797d4b0a109954bb5ebe9c5e49b125 398 SUPERFAMILY SSF47384 171 217 4.12E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS05595 24797d4b0a109954bb5ebe9c5e49b125 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 356 2.3E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS05595 24797d4b0a109954bb5ebe9c5e49b125 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 396 2.3E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS05595 24797d4b0a109954bb5ebe9c5e49b125 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 342 2.3E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS05595 24797d4b0a109954bb5ebe9c5e49b125 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 377 2.3E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS05595 24797d4b0a109954bb5ebe9c5e49b125 398 SMART SM00065 38 180 8.2E-6 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS05595 24797d4b0a109954bb5ebe9c5e49b125 398 SMART SM00387 292 398 1.3E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS05595 24797d4b0a109954bb5ebe9c5e49b125 398 Pfam PF01590 GAF domain 39 167 3.2E-7 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS05595 24797d4b0a109954bb5ebe9c5e49b125 398 SUPERFAMILY SSF55874 253 397 7.2E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS05595 24797d4b0a109954bb5ebe9c5e49b125 398 SUPERFAMILY SSF55781 40 178 4.58E-23 T 28-03-2018 IPR029016 GAF domain-like APY29_RS05595 24797d4b0a109954bb5ebe9c5e49b125 398 Gene3D G3DSA:3.30.450.40 23 180 1.5E-23 T 28-03-2018 IPR029016 GAF domain-like APY29_RS05595 24797d4b0a109954bb5ebe9c5e49b125 398 Gene3D G3DSA:3.30.565.10 254 398 9.5E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS05595 24797d4b0a109954bb5ebe9c5e49b125 398 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 295 397 5.0E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS05595 24797d4b0a109954bb5ebe9c5e49b125 398 Gene3D G3DSA:1.10.287.130 181 249 2.3E-4 T 28-03-2018 APY29_RS09950 4b1d583a195cf939b31780a0b2f4e375 361 Pfam PF00990 Diguanylate cyclase, GGDEF domain 195 350 6.0E-21 T 28-03-2018 IPR000160 GGDEF domain APY29_RS09950 4b1d583a195cf939b31780a0b2f4e375 361 SMART SM00267 184 354 8.9E-24 T 28-03-2018 IPR000160 GGDEF domain APY29_RS09950 4b1d583a195cf939b31780a0b2f4e375 361 SMART SM00065 48 192 1.2E-5 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS09950 4b1d583a195cf939b31780a0b2f4e375 361 Gene3D G3DSA:3.30.450.40 31 192 3.8E-19 T 28-03-2018 IPR029016 GAF domain-like APY29_RS09950 4b1d583a195cf939b31780a0b2f4e375 361 SUPERFAMILY SSF55073 200 355 1.26E-24 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS09950 4b1d583a195cf939b31780a0b2f4e375 361 Gene3D G3DSA:3.30.70.270 193 360 6.9E-31 T 28-03-2018 APY29_RS09950 4b1d583a195cf939b31780a0b2f4e375 361 SUPERFAMILY SSF55781 50 187 3.19E-22 T 28-03-2018 IPR029016 GAF domain-like APY29_RS09950 4b1d583a195cf939b31780a0b2f4e375 361 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 192 353 9.3E-18 T 28-03-2018 IPR000160 GGDEF domain APY29_RS15190 dc2e91b2c080685c40ee2167db638b81 375 Gene3D G3DSA:2.60.260.20 112 166 3.3E-10 T 28-03-2018 APY29_RS15190 dc2e91b2c080685c40ee2167db638b81 375 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 369 39.508 T 28-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 APY29_RS15190 dc2e91b2c080685c40ee2167db638b81 375 SUPERFAMILY SSF57938 131 207 8.76E-21 T 28-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APY29_RS15190 dc2e91b2c080685c40ee2167db638b81 375 SMART SM00271 4 62 6.8E-31 T 28-03-2018 IPR001623 DnaJ domain APY29_RS15190 dc2e91b2c080685c40ee2167db638b81 375 Gene3D G3DSA:1.10.287.110 1 111 2.1E-34 T 28-03-2018 IPR001623 DnaJ domain APY29_RS15190 dc2e91b2c080685c40ee2167db638b81 375 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 345 8.6E-126 T 28-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 APY29_RS15190 dc2e91b2c080685c40ee2167db638b81 375 SUPERFAMILY SSF46565 1 105 1.15E-33 T 28-03-2018 IPR001623 DnaJ domain APY29_RS15190 dc2e91b2c080685c40ee2167db638b81 375 Pfam PF01556 DnaJ C terminal domain 119 329 4.4E-40 T 28-03-2018 IPR002939 Chaperone DnaJ, C-terminal APY29_RS15190 dc2e91b2c080685c40ee2167db638b81 375 Gene3D G3DSA:2.60.260.20 167 250 1.8E-18 T 28-03-2018 APY29_RS15190 dc2e91b2c080685c40ee2167db638b81 375 SUPERFAMILY SSF49493 255 340 7.59E-20 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APY29_RS15190 dc2e91b2c080685c40ee2167db638b81 375 SUPERFAMILY SSF49493 111 135 3.79E-18 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APY29_RS15190 dc2e91b2c080685c40ee2167db638b81 375 SUPERFAMILY SSF49493 182 255 3.79E-18 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APY29_RS15190 dc2e91b2c080685c40ee2167db638b81 375 Pfam PF00226 DnaJ domain 5 67 3.4E-26 T 28-03-2018 IPR001623 DnaJ domain APY29_RS15190 dc2e91b2c080685c40ee2167db638b81 375 PRINTS PR00625 DnaJ domain signature 25 40 7.0E-29 T 28-03-2018 IPR001623 DnaJ domain APY29_RS15190 dc2e91b2c080685c40ee2167db638b81 375 PRINTS PR00625 DnaJ domain signature 42 62 7.0E-29 T 28-03-2018 IPR001623 DnaJ domain APY29_RS15190 dc2e91b2c080685c40ee2167db638b81 375 PRINTS PR00625 DnaJ domain signature 62 81 7.0E-29 T 28-03-2018 IPR001623 DnaJ domain APY29_RS15190 dc2e91b2c080685c40ee2167db638b81 375 PRINTS PR00625 DnaJ domain signature 7 25 7.0E-29 T 28-03-2018 IPR001623 DnaJ domain APY29_RS15190 dc2e91b2c080685c40ee2167db638b81 375 Pfam PF00684 DnaJ central domain 144 203 1.4E-13 T 28-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APY29_RS15190 dc2e91b2c080685c40ee2167db638b81 375 Gene3D G3DSA:2.60.260.20 251 362 1.7E-27 T 28-03-2018 APY29_RS15020 31a7006a9d7cb0f1837e90b1287bb38f 281 Pfam PF13557 Putative MetA-pathway of phenol degradation 63 280 3.2E-11 T 28-03-2018 IPR025737 MetA-pathway of phenol degradation, putative APY29_RS06555 7bdb425bd7163e2d04358431f93e198c 674 SUPERFAMILY SSF52540 100 114 7.09E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS06555 7bdb425bd7163e2d04358431f93e198c 674 SUPERFAMILY SSF52540 593 615 7.09E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS06555 7bdb425bd7163e2d04358431f93e198c 674 SUPERFAMILY SSF52540 189 235 7.09E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS06555 7bdb425bd7163e2d04358431f93e198c 674 SUPERFAMILY SSF52540 383 562 7.09E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS06555 7bdb425bd7163e2d04358431f93e198c 674 Gene3D G3DSA:3.40.50.300 24 445 8.0E-25 T 28-03-2018 APY29_RS06555 7bdb425bd7163e2d04358431f93e198c 674 SMART SM00491 495 623 1.3E-36 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 APY29_RS06555 7bdb425bd7163e2d04358431f93e198c 674 Pfam PF13307 Helicase C-terminal domain 480 636 1.3E-34 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 APY29_RS06555 7bdb425bd7163e2d04358431f93e198c 674 SUPERFAMILY SSF52540 20 115 1.89E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS06555 7bdb425bd7163e2d04358431f93e198c 674 SUPERFAMILY SSF52540 582 620 1.89E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS06555 7bdb425bd7163e2d04358431f93e198c 674 SUPERFAMILY SSF52540 192 249 1.89E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS06555 7bdb425bd7163e2d04358431f93e198c 674 Gene3D G3DSA:3.40.50.300 471 643 2.0E-7 T 28-03-2018 APY29_RS17285 21c3b9dda18dc77ac6596174b47d0ad8 806 Pfam PF00912 Transglycosylase 73 248 2.5E-45 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 APY29_RS17285 21c3b9dda18dc77ac6596174b47d0ad8 806 SUPERFAMILY SSF56601 230 653 7.89E-97 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like APY29_RS17285 21c3b9dda18dc77ac6596174b47d0ad8 806 Gene3D G3DSA:3.40.710.10 276 632 2.2E-70 T 28-03-2018 APY29_RS17285 21c3b9dda18dc77ac6596174b47d0ad8 806 SUPERFAMILY SSF53955 62 278 9.56E-62 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS17285 21c3b9dda18dc77ac6596174b47d0ad8 806 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 56 804 7.4E-232 T 28-03-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 APY29_RS17285 21c3b9dda18dc77ac6596174b47d0ad8 806 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 720 802 2.0E-14 T 28-03-2018 IPR009647 Penicillin-binding, C-terminal APY29_RS17285 21c3b9dda18dc77ac6596174b47d0ad8 806 Gene3D G3DSA:1.10.3810.10 64 265 2.4E-55 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 APY29_RS17285 21c3b9dda18dc77ac6596174b47d0ad8 806 Pfam PF00905 Penicillin binding protein transpeptidase domain 325 545 1.8E-14 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APY29_RS08410 ca948c0a6af81885f20e118e935cab67 249 Pfam PF00877 NlpC/P60 family 139 247 1.4E-29 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain APY29_RS08410 ca948c0a6af81885f20e118e935cab67 249 Gene3D G3DSA:3.90.1720.10 122 249 3.9E-38 T 28-03-2018 APY29_RS08410 ca948c0a6af81885f20e118e935cab67 249 SUPERFAMILY SSF54001 121 248 4.91E-40 T 28-03-2018 APY29_RS19860 82f8b0ab033b666b7528296c52828c09 189 SUPERFAMILY SSF50814 13 176 1.31E-29 T 28-03-2018 IPR012674 Calycin APY29_RS19860 82f8b0ab033b666b7528296c52828c09 189 Gene3D G3DSA:2.40.128.20 1 174 1.9E-23 T 28-03-2018 IPR012674 Calycin APY29_RS19860 82f8b0ab033b666b7528296c52828c09 189 Pfam PF08212 Lipocalin-like domain 32 173 2.4E-41 T 28-03-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain APY29_RS19860 82f8b0ab033b666b7528296c52828c09 189 ProSitePatterns PS00213 Lipocalin signature. 33 44 - T 28-03-2018 IPR022272 Lipocalin family conserved site APY29_RS19860 82f8b0ab033b666b7528296c52828c09 189 PIRSF PIRSF036893 1 185 1.0E-44 T 28-03-2018 IPR022271 Lipocalin, ApoD type APY29_RS12320 5763870c564ac0846f8f81038bf701cd 289 Gene3D G3DSA:3.40.50.150 13 289 3.4E-69 T 28-03-2018 APY29_RS12320 5763870c564ac0846f8f81038bf701cd 289 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 33 47 1.2E-39 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APY29_RS12320 5763870c564ac0846f8f81038bf701cd 289 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 257 277 1.2E-39 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APY29_RS12320 5763870c564ac0846f8f81038bf701cd 289 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 215 232 1.2E-39 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APY29_RS12320 5763870c564ac0846f8f81038bf701cd 289 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 71 91 1.2E-39 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APY29_RS12320 5763870c564ac0846f8f81038bf701cd 289 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 234 252 1.2E-39 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APY29_RS12320 5763870c564ac0846f8f81038bf701cd 289 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 38 43 - T 28-03-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 KEGG: 00860+2.1.1.11|MetaCyc: PWY-5531|MetaCyc: PWY-7159 APY29_RS12320 5763870c564ac0846f8f81038bf701cd 289 SUPERFAMILY SSF53335 16 94 1.65E-65 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS12320 5763870c564ac0846f8f81038bf701cd 289 SUPERFAMILY SSF53335 124 277 1.65E-65 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS12320 5763870c564ac0846f8f81038bf701cd 289 Pfam PF01555 DNA methylase 34 273 1.7E-60 T 28-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 APY29_RS10160 62999292f76f7cce3c919cdd0ef1a041 146 Pfam PF00545 ribonuclease 55 135 3.4E-27 T 28-03-2018 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 APY29_RS10160 62999292f76f7cce3c919cdd0ef1a041 146 SUPERFAMILY SSF53933 54 138 1.81E-32 T 28-03-2018 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 APY29_RS10160 62999292f76f7cce3c919cdd0ef1a041 146 Gene3D G3DSA:3.10.450.30 51 140 2.8E-30 T 28-03-2018 APY29_RS08380 1e39a03d959d672d85006fe2809afa92 433 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 301 22.865 T 28-03-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APY29_RS08380 1e39a03d959d672d85006fe2809afa92 433 SMART SM00977 353 426 3.0E-18 T 28-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APY29_RS08380 1e39a03d959d672d85006fe2809afa92 433 Pfam PF01171 PP-loop family 16 193 6.0E-55 T 28-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 APY29_RS08380 1e39a03d959d672d85006fe2809afa92 433 Pfam PF11734 TilS substrate C-terminal domain 355 426 2.2E-16 T 28-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APY29_RS08380 1e39a03d959d672d85006fe2809afa92 433 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 16 197 6.6E-50 T 28-03-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APY29_RS08380 1e39a03d959d672d85006fe2809afa92 433 Pfam PF09179 TilS substrate binding domain 242 308 1.6E-10 T 28-03-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APY29_RS08380 1e39a03d959d672d85006fe2809afa92 433 SUPERFAMILY SSF82829 233 312 3.92E-15 T 28-03-2018 APY29_RS08380 1e39a03d959d672d85006fe2809afa92 433 Gene3D G3DSA:3.40.50.620 10 221 9.7E-38 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS08380 1e39a03d959d672d85006fe2809afa92 433 SUPERFAMILY SSF56037 317 426 3.14E-21 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APY29_RS08380 1e39a03d959d672d85006fe2809afa92 433 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 353 398 4.7E-15 T 28-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APY29_RS08380 1e39a03d959d672d85006fe2809afa92 433 SUPERFAMILY SSF52402 12 222 4.41E-60 T 28-03-2018 APY29_RS05555 c5914466255f7019eed38caae2083e75 334 SUPERFAMILY SSF51569 4 333 2.2E-130 T 28-03-2018 APY29_RS05555 c5914466255f7019eed38caae2083e75 334 Pfam PF00274 Fructose-bisphosphate aldolase class-I 6 333 3.8E-137 T 28-03-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05555 c5914466255f7019eed38caae2083e75 334 Gene3D G3DSA:3.20.20.70 2 334 1.9E-150 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS05555 c5914466255f7019eed38caae2083e75 334 ProSitePatterns PS00158 Fructose-bisphosphate aldolase class-I active site. 211 221 - T 28-03-2018 IPR029768 Fructose-bisphosphate aldolase class-I active site KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS00570 fd22ce6e192ac121c244618d606d379c 1115 Pfam PF00486 Transcriptional regulatory protein, C terminal 35 110 5.1E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS00570 fd22ce6e192ac121c244618d606d379c 1115 SUPERFAMILY SSF48452 686 864 7.27E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS00570 fd22ce6e192ac121c244618d606d379c 1115 SMART SM00862 35 110 5.3E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS00570 fd22ce6e192ac121c244618d606d379c 1115 Gene3D G3DSA:1.20.1250.10 784 861 3.0E-6 T 28-03-2018 APY29_RS00570 fd22ce6e192ac121c244618d606d379c 1115 SUPERFAMILY SSF52540 142 239 2.2E-10 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS00570 fd22ce6e192ac121c244618d606d379c 1115 SUPERFAMILY SSF52540 283 381 2.2E-10 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS00570 fd22ce6e192ac121c244618d606d379c 1115 Gene3D G3DSA:1.25.40.10 862 1100 0.0056 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS00570 fd22ce6e192ac121c244618d606d379c 1115 Gene3D G3DSA:1.25.40.10 688 783 3.2E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS00570 fd22ce6e192ac121c244618d606d379c 1115 Gene3D G3DSA:1.10.10.10 2 115 4.4E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS00570 fd22ce6e192ac121c244618d606d379c 1115 Pfam PF13191 AAA ATPase domain 150 324 3.8E-12 T 28-03-2018 APY29_RS00570 fd22ce6e192ac121c244618d606d379c 1115 Gene3D G3DSA:3.40.50.300 140 345 1.4E-9 T 28-03-2018 APY29_RS00570 fd22ce6e192ac121c244618d606d379c 1115 SUPERFAMILY SSF46894 17 110 1.7E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS02380 8a2ff19e42f8266b14a3a765001423e3 410 Pfam PF01139 tRNA-splicing ligase RtcB 38 410 3.6E-126 T 28-03-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 APY29_RS02380 8a2ff19e42f8266b14a3a765001423e3 410 SUPERFAMILY SSF103365 20 410 4.84E-130 T 28-03-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 APY29_RS03550 3095cd009c3efbe7b04013234d0a73a4 331 SUPERFAMILY SSF51430 1 313 1.01E-101 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS03550 3095cd009c3efbe7b04013234d0a73a4 331 Pfam PF00248 Aldo/keto reductase family 17 310 7.5E-75 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS03550 3095cd009c3efbe7b04013234d0a73a4 331 Gene3D G3DSA:3.20.20.100 1 330 9.7E-110 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS05895 636f857ed89a386d3e4bc0ae88175124 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 3 195 26.568 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 APY29_RS05895 636f857ed89a386d3e4bc0ae88175124 202 SUPERFAMILY SSF52540 1 188 1.16E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS05895 636f857ed89a386d3e4bc0ae88175124 202 Pfam PF01121 Dephospho-CoA kinase 5 182 2.8E-57 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 APY29_RS05895 636f857ed89a386d3e4bc0ae88175124 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 186 9.8E-49 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 APY29_RS05895 636f857ed89a386d3e4bc0ae88175124 202 Gene3D G3DSA:3.40.50.300 2 201 3.8E-35 T 28-03-2018 APY29_RS14975 a2aa00c10d0b5c1ba66b67b830789720 47 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 18 42 5.7E-7 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APY29_RS14975 a2aa00c10d0b5c1ba66b67b830789720 47 Gene3D G3DSA:1.20.140.10 2 47 8.1E-9 T 28-03-2018 APY29_RS14975 a2aa00c10d0b5c1ba66b67b830789720 47 SUPERFAMILY SSF47203 18 46 4.99E-7 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APY29_RS06080 470674a0372f2deed8f4b29154a6e4b2 370 SUPERFAMILY SSF53850 74 300 2.14E-43 T 28-03-2018 APY29_RS06080 470674a0372f2deed8f4b29154a6e4b2 370 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 77 360 8.2E-100 T 28-03-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 APY29_RS06080 470674a0372f2deed8f4b29154a6e4b2 370 Gene3D G3DSA:3.40.190.10 71 176 8.3E-19 T 28-03-2018 APY29_RS06080 470674a0372f2deed8f4b29154a6e4b2 370 Gene3D G3DSA:3.40.190.10 177 359 2.7E-30 T 28-03-2018 APY29_RS06080 470674a0372f2deed8f4b29154a6e4b2 370 SMART SM00062 76 302 4.0E-12 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APY29_RS06080 470674a0372f2deed8f4b29154a6e4b2 370 Pfam PF09084 NMT1/THI5 like 116 230 2.3E-11 T 28-03-2018 IPR015168 SsuA/THI5-like APY29_RS14265 760c89a3e1288229b9ac34f764d98ba3 169 Pfam PF01292 Prokaryotic cytochrome b561 1 166 2.6E-21 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 APY29_RS14265 760c89a3e1288229b9ac34f764d98ba3 169 Gene3D G3DSA:1.20.950.20 1 169 9.1E-26 T 28-03-2018 APY29_RS14265 760c89a3e1288229b9ac34f764d98ba3 169 SUPERFAMILY SSF81342 2 167 2.09E-28 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 APY29_RS19915 0efbc5274a5422f8682ea956888db14c 549 Gene3D G3DSA:3.50.30.30 105 261 1.8E-15 T 28-03-2018 APY29_RS19915 0efbc5274a5422f8682ea956888db14c 549 SUPERFAMILY SSF53187 22 70 3.25E-62 T 28-03-2018 APY29_RS19915 0efbc5274a5422f8682ea956888db14c 549 SUPERFAMILY SSF53187 282 526 3.25E-62 T 28-03-2018 APY29_RS19915 0efbc5274a5422f8682ea956888db14c 549 Pfam PF02225 PA domain 130 218 2.9E-7 T 28-03-2018 IPR003137 PA domain APY29_RS19915 0efbc5274a5422f8682ea956888db14c 549 Gene3D G3DSA:3.40.630.10 262 536 4.5E-44 T 28-03-2018 APY29_RS19915 0efbc5274a5422f8682ea956888db14c 549 SUPERFAMILY SSF52025 120 217 3.66E-8 T 28-03-2018 APY29_RS19915 0efbc5274a5422f8682ea956888db14c 549 Pfam PF04389 Peptidase family M28 298 508 5.8E-49 T 28-03-2018 IPR007484 Peptidase M28 APY29_RS21290 54579eedbe6e396494be6094a5f1cfa4 402 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 2 402 8.7E-217 T 28-03-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 APY29_RS21290 54579eedbe6e396494be6094a5f1cfa4 402 ProSitePatterns PS00737 Thiolases signature 2. 348 364 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 APY29_RS21290 54579eedbe6e396494be6094a5f1cfa4 402 PIRSF PIRSF000429 1 402 1.5E-127 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 APY29_RS21290 54579eedbe6e396494be6094a5f1cfa4 402 Gene3D G3DSA:3.40.47.10 1 158 1.6E-27 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS21290 54579eedbe6e396494be6094a5f1cfa4 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 APY29_RS21290 54579eedbe6e396494be6094a5f1cfa4 402 Pfam PF02803 Thiolase, C-terminal domain 278 401 1.1E-39 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 APY29_RS21290 54579eedbe6e396494be6094a5f1cfa4 402 Gene3D G3DSA:3.40.47.10 279 399 4.7E-27 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS21290 54579eedbe6e396494be6094a5f1cfa4 402 Gene3D G3DSA:3.40.47.10 159 278 8.8E-25 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS21290 54579eedbe6e396494be6094a5f1cfa4 402 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 APY29_RS21290 54579eedbe6e396494be6094a5f1cfa4 402 SUPERFAMILY SSF53901 278 401 1.1E-40 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS21290 54579eedbe6e396494be6094a5f1cfa4 402 Pfam PF00108 Thiolase, N-terminal domain 4 269 2.1E-79 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 APY29_RS21290 54579eedbe6e396494be6094a5f1cfa4 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 400 3.0E-135 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 APY29_RS21290 54579eedbe6e396494be6094a5f1cfa4 402 SUPERFAMILY SSF53901 3 277 5.77E-79 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS22105 c79d4464d49838f6af42d719b0c775e9 198 TIGRFAM TIGR04273 Y_sulf_Ax21: sulfation-dependent quorum factor, Ax21 family 6 198 1.4E-96 T 28-03-2018 IPR026364 Ax21 family APY29_RS22105 c79d4464d49838f6af42d719b0c775e9 198 Gene3D G3DSA:2.40.160.20 86 196 1.0E-7 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APY29_RS22105 c79d4464d49838f6af42d719b0c775e9 198 Gene3D G3DSA:2.40.160.20 5 85 5.1E-6 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APY29_RS22105 c79d4464d49838f6af42d719b0c775e9 198 SUPERFAMILY SSF56935 24 133 1.67E-9 T 28-03-2018 APY29_RS10375 9e57a2fc41d9d96428039df263391438 432 PRINTS PR00149 Fumarate lyase superfamily signature 279 295 2.0E-13 T 28-03-2018 IPR000362 Fumarate lyase family APY29_RS10375 9e57a2fc41d9d96428039df263391438 432 PRINTS PR00149 Fumarate lyase superfamily signature 150 168 2.0E-13 T 28-03-2018 IPR000362 Fumarate lyase family APY29_RS10375 9e57a2fc41d9d96428039df263391438 432 PRINTS PR00149 Fumarate lyase superfamily signature 105 123 2.0E-13 T 28-03-2018 IPR000362 Fumarate lyase family APY29_RS10375 9e57a2fc41d9d96428039df263391438 432 Gene3D G3DSA:1.10.275.10 5 109 2.0E-24 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal APY29_RS10375 9e57a2fc41d9d96428039df263391438 432 ProSitePatterns PS00163 Fumarate lyases signature. 279 288 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 APY29_RS10375 9e57a2fc41d9d96428039df263391438 432 Gene3D G3DSA:1.20.200.10 110 375 1.0E-57 T 28-03-2018 APY29_RS10375 9e57a2fc41d9d96428039df263391438 432 PRINTS PR00145 Argininosuccinate lyase family signature 104 126 1.4E-30 T 28-03-2018 APY29_RS10375 9e57a2fc41d9d96428039df263391438 432 PRINTS PR00145 Argininosuccinate lyase family signature 196 212 1.4E-30 T 28-03-2018 APY29_RS10375 9e57a2fc41d9d96428039df263391438 432 PRINTS PR00145 Argininosuccinate lyase family signature 313 332 1.4E-30 T 28-03-2018 APY29_RS10375 9e57a2fc41d9d96428039df263391438 432 PRINTS PR00145 Argininosuccinate lyase family signature 145 165 1.4E-30 T 28-03-2018 APY29_RS10375 9e57a2fc41d9d96428039df263391438 432 PRINTS PR00145 Argininosuccinate lyase family signature 279 295 1.4E-30 T 28-03-2018 APY29_RS10375 9e57a2fc41d9d96428039df263391438 432 Gene3D G3DSA:1.10.40.30 376 430 4.8E-5 T 28-03-2018 APY29_RS10375 9e57a2fc41d9d96428039df263391438 432 SUPERFAMILY SSF48557 25 402 4.56E-84 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 APY29_RS10375 9e57a2fc41d9d96428039df263391438 432 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 429 29.36 T 28-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 APY29_RS10375 9e57a2fc41d9d96428039df263391438 432 Pfam PF00206 Lyase 34 302 2.2E-44 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal APY29_RS13525 94120d85973f492e87ee0b3a85a08286 247 Gene3D G3DSA:2.40.440.10 80 219 5.6E-5 T 28-03-2018 APY29_RS13525 94120d85973f492e87ee0b3a85a08286 247 Pfam PF13645 L,D-transpeptidase catalytic domain 50 219 2.4E-65 T 28-03-2018 IPR032676 Putative L,D-transpeptidase catalytic domain APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 ProSitePatterns PS01312 SecA family signature. 496 511 - T 28-03-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 SUPERFAMILY SSF81886 888 900 6.28E-79 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 SUPERFAMILY SSF81886 618 837 6.28E-79 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 815 0.0 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 SMART SM00958 228 354 8.7E-75 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 SUPERFAMILY SSF52540 364 411 7.75E-87 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 SUPERFAMILY SSF52540 6 228 7.75E-87 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 Pfam PF02810 SEC-C motif 892 910 1.1E-10 T 28-03-2018 IPR004027 SEC-C motif APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 SUPERFAMILY SSF81767 227 364 2.09E-42 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 Pfam PF07516 SecA Wing and Scaffold domain 615 826 5.7E-64 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 SUPERFAMILY SSF52540 412 615 1.55E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 829 20.05 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 Gene3D G3DSA:3.40.50.300 9 269 8.2E-59 T 28-03-2018 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 Gene3D G3DSA:3.40.50.300 299 412 6.5E-9 T 28-03-2018 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 SMART SM00957 6 398 0.0 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 PRINTS PR00906 SecA protein signature 101 115 1.3E-71 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 PRINTS PR00906 SecA protein signature 409 422 1.3E-71 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 PRINTS PR00906 SecA protein signature 63 87 1.3E-71 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 PRINTS PR00906 SecA protein signature 170 190 1.3E-71 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 PRINTS PR00906 SecA protein signature 372 389 1.3E-71 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 PRINTS PR00906 SecA protein signature 117 127 1.3E-71 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 PRINTS PR00906 SecA protein signature 335 357 1.3E-71 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 Gene3D G3DSA:1.10.3060.10 631 710 1.3E-26 T 28-03-2018 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 Pfam PF01043 SecA preprotein cross-linking domain 233 354 1.0E-37 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 Gene3D G3DSA:3.40.50.300 413 630 4.7E-56 T 28-03-2018 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 Pfam PF07517 SecA DEAD-like domain 7 398 6.8E-134 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 APY29_RS19000 698a76406f5bb7391551513a173e97ea 912 Gene3D G3DSA:3.10.450.50 714 912 1.4E-51 T 28-03-2018 APY29_RS12580 75f2a9741497a98ff5fbd94ba83f36df 249 SUPERFAMILY SSF55729 11 232 2.33E-86 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS12580 75f2a9741497a98ff5fbd94ba83f36df 249 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 249 95.921 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 APY29_RS12580 75f2a9741497a98ff5fbd94ba83f36df 249 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 39 209 4.0E-70 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 APY29_RS12580 75f2a9741497a98ff5fbd94ba83f36df 249 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 43 220 1.1E-58 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 APY29_RS19260 9a7886cc1c3a2d6b334c8ff13f851c38 553 SMART SM00382 348 526 1.5E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS19260 9a7886cc1c3a2d6b334c8ff13f851c38 553 SMART SM00382 31 236 2.7E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS19260 9a7886cc1c3a2d6b334c8ff13f851c38 553 SUPERFAMILY SSF52540 303 522 4.18E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS19260 9a7886cc1c3a2d6b334c8ff13f851c38 553 Gene3D G3DSA:3.40.50.300 290 542 6.8E-57 T 28-03-2018 APY29_RS19260 9a7886cc1c3a2d6b334c8ff13f851c38 553 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 552 6.3E-287 T 28-03-2018 IPR022374 ABC transporter, ATP-binding protein, ChvD APY29_RS19260 9a7886cc1c3a2d6b334c8ff13f851c38 553 SUPERFAMILY SSF52540 9 237 5.42E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS19260 9a7886cc1c3a2d6b334c8ff13f851c38 553 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS19260 9a7886cc1c3a2d6b334c8ff13f851c38 553 Gene3D G3DSA:3.40.50.300 7 289 1.9E-53 T 28-03-2018 APY29_RS19260 9a7886cc1c3a2d6b334c8ff13f851c38 553 Pfam PF12848 ABC transporter 230 306 1.9E-11 T 28-03-2018 IPR032781 ABC-transporter extension domain APY29_RS19260 9a7886cc1c3a2d6b334c8ff13f851c38 553 Pfam PF00005 ABC transporter 340 473 2.2E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS19260 9a7886cc1c3a2d6b334c8ff13f851c38 553 Pfam PF00005 ABC transporter 23 191 1.0E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS07150 41e9973ed69b1e01d16014ebe4cefc0d 330 Pfam PF13365 Trypsin-like peptidase domain 133 288 4.3E-8 T 28-03-2018 APY29_RS07150 41e9973ed69b1e01d16014ebe4cefc0d 330 Gene3D G3DSA:2.40.10.10 199 318 4.4E-22 T 28-03-2018 APY29_RS07150 41e9973ed69b1e01d16014ebe4cefc0d 330 Gene3D G3DSA:2.40.10.10 93 183 1.1E-11 T 28-03-2018 APY29_RS07150 41e9973ed69b1e01d16014ebe4cefc0d 330 SUPERFAMILY SSF50494 97 327 6.41E-38 T 28-03-2018 IPR009003 Peptidase S1, PA clan APY29_RS11035 8383e41e6dec615d3f5ab1c19b40d658 1167 SUPERFAMILY SSF82714 831 914 1.44E-12 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS11035 8383e41e6dec615d3f5ab1c19b40d658 1167 Gene3D G3DSA:3.30.2090.10 208 341 5.9E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS11035 8383e41e6dec615d3f5ab1c19b40d658 1167 SUPERFAMILY SSF82866 916 1138 4.45E-50 T 28-03-2018 APY29_RS11035 8383e41e6dec615d3f5ab1c19b40d658 1167 Gene3D G3DSA:1.20.1640.10 918 1139 2.0E-42 T 28-03-2018 APY29_RS11035 8383e41e6dec615d3f5ab1c19b40d658 1167 Gene3D G3DSA:3.30.70.1430 682 785 1.1E-8 T 28-03-2018 APY29_RS11035 8383e41e6dec615d3f5ab1c19b40d658 1167 PRINTS PR00702 Acriflavin resistance protein family signature 31 55 2.3E-15 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS11035 8383e41e6dec615d3f5ab1c19b40d658 1167 PRINTS PR00702 Acriflavin resistance protein family signature 510 533 2.3E-15 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS11035 8383e41e6dec615d3f5ab1c19b40d658 1167 PRINTS PR00702 Acriflavin resistance protein family signature 59 77 2.3E-15 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS11035 8383e41e6dec615d3f5ab1c19b40d658 1167 Gene3D G3DSA:1.20.1640.10 352 565 3.1E-43 T 28-03-2018 APY29_RS11035 8383e41e6dec615d3f5ab1c19b40d658 1167 SUPERFAMILY SSF82693 62 153 6.8E-19 T 28-03-2018 APY29_RS11035 8383e41e6dec615d3f5ab1c19b40d658 1167 Gene3D G3DSA:3.30.70.1430 61 160 5.9E-23 T 28-03-2018 APY29_RS11035 8383e41e6dec615d3f5ab1c19b40d658 1167 Gene3D G3DSA:3.30.2090.10 830 917 6.9E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS11035 8383e41e6dec615d3f5ab1c19b40d658 1167 SUPERFAMILY SSF82714 211 277 3.27E-11 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS11035 8383e41e6dec615d3f5ab1c19b40d658 1167 Pfam PF00873 AcrB/AcrD/AcrF family 25 278 3.0E-56 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS11035 8383e41e6dec615d3f5ab1c19b40d658 1167 Pfam PF00873 AcrB/AcrD/AcrF family 634 1135 8.2E-114 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS11035 8383e41e6dec615d3f5ab1c19b40d658 1167 Pfam PF00873 AcrB/AcrD/AcrF family 296 558 9.5E-75 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS11035 8383e41e6dec615d3f5ab1c19b40d658 1167 SUPERFAMILY SSF82866 362 558 1.57E-41 T 28-03-2018 APY29_RS21495 145cca8424126d0352f04d279bccdeb7 195 TIGRFAM TIGR03566 FMN_reduc_MsuE: FMN reductase 8 179 1.8E-74 T 28-03-2018 IPR019912 FMN reductase, MsuE-like KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 APY29_RS21495 145cca8424126d0352f04d279bccdeb7 195 SUPERFAMILY SSF52218 4 187 5.0E-32 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS21495 145cca8424126d0352f04d279bccdeb7 195 Gene3D G3DSA:3.40.50.360 4 184 6.8E-29 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS21495 145cca8424126d0352f04d279bccdeb7 195 Pfam PF03358 NADPH-dependent FMN reductase 8 151 1.5E-26 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APY29_RS18060 b6148c406cf6021627824522bdfce5b1 103 Gene3D G3DSA:3.30.70.600 4 103 1.9E-35 T 28-03-2018 IPR027486 Ribosomal protein S10 domain APY29_RS18060 b6148c406cf6021627824522bdfce5b1 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.7E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18060 b6148c406cf6021627824522bdfce5b1 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.7E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18060 b6148c406cf6021627824522bdfce5b1 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.7E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18060 b6148c406cf6021627824522bdfce5b1 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 2.1E-34 T 28-03-2018 IPR027486 Ribosomal protein S10 domain APY29_RS18060 b6148c406cf6021627824522bdfce5b1 103 SUPERFAMILY SSF54999 5 102 1.83E-36 T 28-03-2018 IPR027486 Ribosomal protein S10 domain APY29_RS18060 b6148c406cf6021627824522bdfce5b1 103 SMART SM01403 7 101 5.7E-55 T 28-03-2018 IPR027486 Ribosomal protein S10 domain APY29_RS18060 b6148c406cf6021627824522bdfce5b1 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 4.4E-45 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18060 b6148c406cf6021627824522bdfce5b1 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.947 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18060 b6148c406cf6021627824522bdfce5b1 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 28-03-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS13770 ecd96f2d230573360fa83c62f0f455fd 385 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 157 375 3.3E-43 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 APY29_RS13770 ecd96f2d230573360fa83c62f0f455fd 385 SMART SM00646 217 375 3.0E-52 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 APY29_RS13770 ecd96f2d230573360fa83c62f0f455fd 385 Pfam PF11741 AMIN domain 36 114 4.0E-10 T 28-03-2018 IPR021731 AMIN domain APY29_RS13770 ecd96f2d230573360fa83c62f0f455fd 385 Gene3D G3DSA:3.40.630.40 152 381 3.4E-50 T 28-03-2018 APY29_RS13770 ecd96f2d230573360fa83c62f0f455fd 385 SUPERFAMILY SSF53187 302 378 7.85E-50 T 28-03-2018 APY29_RS13770 ecd96f2d230573360fa83c62f0f455fd 385 SUPERFAMILY SSF53187 155 251 7.85E-50 T 28-03-2018 APY29_RS21005 932bea6851410e2e33b74f178507a862 572 Pfam PF03109 ABC1 family 122 240 2.4E-28 T 28-03-2018 IPR004147 UbiB domain APY29_RS21005 932bea6851410e2e33b74f178507a862 572 Gene3D G3DSA:3.30.200.20 112 254 2.7E-22 T 28-03-2018 APY29_RS21005 932bea6851410e2e33b74f178507a862 572 SUPERFAMILY SSF56112 104 168 2.59E-21 T 28-03-2018 IPR011009 Protein kinase-like domain APY29_RS21005 932bea6851410e2e33b74f178507a862 572 SUPERFAMILY SSF56112 203 330 2.59E-21 T 28-03-2018 IPR011009 Protein kinase-like domain APY29_RS21005 932bea6851410e2e33b74f178507a862 572 Gene3D G3DSA:1.10.510.10 259 384 0.0018 T 28-03-2018 APY29_RS08085 0820c893eaba198bc23559dc52849f0c 801 SUPERFAMILY SSF141868 549 793 2.75E-65 T 28-03-2018 IPR001633 EAL domain APY29_RS08085 0820c893eaba198bc23559dc52849f0c 801 SMART SM00052 543 789 1.1E-49 T 28-03-2018 IPR001633 EAL domain APY29_RS08085 0820c893eaba198bc23559dc52849f0c 801 Gene3D G3DSA:3.30.70.270 386 545 3.6E-51 T 28-03-2018 APY29_RS08085 0820c893eaba198bc23559dc52849f0c 801 SMART SM00267 359 531 2.7E-53 T 28-03-2018 IPR000160 GGDEF domain APY29_RS08085 0820c893eaba198bc23559dc52849f0c 801 Gene3D G3DSA:3.20.20.450 546 797 3.0E-67 T 28-03-2018 IPR001633 EAL domain APY29_RS08085 0820c893eaba198bc23559dc52849f0c 801 SMART SM00086 317 359 3.3E-4 T 28-03-2018 IPR001610 PAC motif APY29_RS08085 0820c893eaba198bc23559dc52849f0c 801 Pfam PF08447 PAS fold 270 340 8.3E-6 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 APY29_RS08085 0820c893eaba198bc23559dc52849f0c 801 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 368 530 3.5E-38 T 28-03-2018 IPR000160 GGDEF domain APY29_RS08085 0820c893eaba198bc23559dc52849f0c 801 SMART SM00091 247 313 3.0E-5 T 28-03-2018 IPR000014 PAS domain APY29_RS08085 0820c893eaba198bc23559dc52849f0c 801 SUPERFAMILY SSF55785 235 357 4.36E-15 T 28-03-2018 IPR000014 PAS domain APY29_RS08085 0820c893eaba198bc23559dc52849f0c 801 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 245 363 1.9E-13 T 28-03-2018 IPR000014 PAS domain APY29_RS08085 0820c893eaba198bc23559dc52849f0c 801 Pfam PF00563 EAL domain 549 784 4.0E-56 T 28-03-2018 IPR001633 EAL domain APY29_RS08085 0820c893eaba198bc23559dc52849f0c 801 SUPERFAMILY SSF55073 375 533 2.9E-44 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS08085 0820c893eaba198bc23559dc52849f0c 801 Gene3D G3DSA:3.30.450.20 244 385 1.1E-18 T 28-03-2018 APY29_RS08085 0820c893eaba198bc23559dc52849f0c 801 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 527 1.7E-38 T 28-03-2018 IPR000160 GGDEF domain APY29_RS01640 0caacb284242575c1ad9c1486f5be584 324 PIRSF PIRSF028561 1 320 9.8E-168 T 28-03-2018 IPR014548 Predicted acyltransferase APY29_RS01640 0caacb284242575c1ad9c1486f5be584 324 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 91 250 2.6E-7 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APY29_RS06820 4b738dfee21a5a6b608d41c6f8acea69 459 Pfam PF00144 Beta-lactamase 80 405 6.6E-66 T 28-03-2018 IPR001466 Beta-lactamase-related APY29_RS06820 4b738dfee21a5a6b608d41c6f8acea69 459 SUPERFAMILY SSF56601 74 424 4.73E-75 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like APY29_RS06820 4b738dfee21a5a6b608d41c6f8acea69 459 Gene3D G3DSA:3.40.710.10 66 415 1.2E-72 T 28-03-2018 APY29_RS08670 c77bfe001c95907a5f7d1649de09dbc6 405 Gene3D G3DSA:3.40.50.1100 79 208 4.6E-37 T 28-03-2018 APY29_RS08670 c77bfe001c95907a5f7d1649de09dbc6 405 Gene3D G3DSA:3.40.50.1100 19 78 3.3E-7 T 28-03-2018 APY29_RS08670 c77bfe001c95907a5f7d1649de09dbc6 405 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 12 401 50.696 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 APY29_RS08670 c77bfe001c95907a5f7d1649de09dbc6 405 SUPERFAMILY SSF53686 13 398 3.67E-143 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APY29_RS08670 c77bfe001c95907a5f7d1649de09dbc6 405 PIRSF PIRSF001413 4 404 1.3E-154 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 APY29_RS08670 c77bfe001c95907a5f7d1649de09dbc6 405 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 63 388 2.3E-45 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APY29_RS08670 c77bfe001c95907a5f7d1649de09dbc6 405 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 91 105 - T 28-03-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 APY29_RS08670 c77bfe001c95907a5f7d1649de09dbc6 405 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 17 399 1.1E-185 T 28-03-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 APY29_RS08670 c77bfe001c95907a5f7d1649de09dbc6 405 Gene3D G3DSA:3.40.50.1100 209 401 2.1E-38 T 28-03-2018 APY29_RS02255 238fb07a5c94360553a5fbaf8a301e7c 180 Gene3D G3DSA:1.20.950.20 1 180 1.0E-35 T 28-03-2018 APY29_RS02255 238fb07a5c94360553a5fbaf8a301e7c 180 SUPERFAMILY SSF81342 1 178 6.51E-37 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 APY29_RS02255 238fb07a5c94360553a5fbaf8a301e7c 180 Pfam PF01292 Prokaryotic cytochrome b561 7 175 1.7E-29 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 APY29_RS22680 a1dafe188626a0a4fcf632cd90eb3bf5 226 SUPERFAMILY SSF53639 4 189 1.88E-45 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal APY29_RS22680 a1dafe188626a0a4fcf632cd90eb3bf5 226 SMART SM01007 8 186 1.9E-45 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal APY29_RS22680 a1dafe188626a0a4fcf632cd90eb3bf5 226 Gene3D G3DSA:3.40.225.10 3 208 8.6E-47 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal APY29_RS22680 a1dafe188626a0a4fcf632cd90eb3bf5 226 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 183 1.2E-40 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal APY29_RS12310 048d80c75be4b80cdb12e890d2ea2108 195 SUPERFAMILY SSF53271 53 189 6.82E-15 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like APY29_RS12310 048d80c75be4b80cdb12e890d2ea2108 195 Pfam PF00156 Phosphoribosyl transferase domain 55 188 1.7E-7 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 APY29_RS12310 048d80c75be4b80cdb12e890d2ea2108 195 Gene3D G3DSA:3.40.50.2020 32 194 2.8E-17 T 28-03-2018 APY29_RS08350 6319b8d3df2e7372036b57a8f85150d7 455 SUPERFAMILY SSF111283 21 453 2.22E-123 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 APY29_RS08350 6319b8d3df2e7372036b57a8f85150d7 455 Gene3D G3DSA:3.30.2290.10 4 240 6.8E-56 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain APY29_RS08350 6319b8d3df2e7372036b57a8f85150d7 455 Pfam PF01523 Putative modulator of DNA gyrase 39 331 2.6E-60 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 APY29_RS07010 eabb05132d7d581f95fb075e0501748f 370 SUPERFAMILY SSF56796 15 368 1.57E-102 T 28-03-2018 APY29_RS07010 eabb05132d7d581f95fb075e0501748f 370 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 18 366 2.3E-108 T 28-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 APY29_RS07010 eabb05132d7d581f95fb075e0501748f 370 Gene3D G3DSA:3.40.50.1970 6 179 6.2E-46 T 28-03-2018 APY29_RS07010 eabb05132d7d581f95fb075e0501748f 370 Gene3D G3DSA:1.20.1090.10 180 370 1.1E-65 T 28-03-2018 APY29_RS07010 eabb05132d7d581f95fb075e0501748f 370 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 8 370 39.392 T 28-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 APY29_RS07010 eabb05132d7d581f95fb075e0501748f 370 Pfam PF01761 3-dehydroquinate synthase 74 337 1.9E-102 T 28-03-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 APY29_RS07010 eabb05132d7d581f95fb075e0501748f 370 PIRSF PIRSF001455 21 369 4.2E-103 T 28-03-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 SUPERFAMILY SSF51126 2840 3012 1.82E-12 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 1.1E-5 T 28-03-2018 IPR024973 ESPR domain APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 SUPERFAMILY SSF51126 2436 2715 1.35E-29 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 SUPERFAMILY SSF51126 132 483 7.53E-9 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Gene3D G3DSA:2.160.20.20 1397 1661 0.011 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Gene3D G3DSA:2.160.20.20 366 495 0.16 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Gene3D G3DSA:2.160.20.20 711 843 0.096 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 SUPERFAMILY SSF51126 2650 2851 1.6E-16 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 SUPERFAMILY SSF51126 1662 1857 4.39E-19 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 SUPERFAMILY SSF51126 1889 1965 4.39E-19 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 SUPERFAMILY SSF51126 1425 1664 2.17E-16 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 SUPERFAMILY SSF51126 996 1310 3.77E-36 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 SUPERFAMILY SSF51126 1342 1415 3.77E-36 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 SUPERFAMILY SSF51126 748 1085 1.91E-25 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Gene3D G3DSA:3.30.1390.40 2461 2480 0.099 T 28-03-2018 APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 SUPERFAMILY SSF103515 3090 3397 3.14E-52 T 28-03-2018 IPR005546 Autotransporter beta-domain APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 SMART SM00869 3126 3387 1.4E-37 T 28-03-2018 IPR005546 Autotransporter beta-domain APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 591 622 2.2E-10 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1020 1051 4.9E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1824 1855 1.6E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1191 1222 2.3E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2374 2405 6.7E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2738 2766 4.3E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1996 2025 1.5E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2610 2639 8.6E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1449 1479 3.0E-10 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2460 2491 1.8E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1910 1941 6.2E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 505 534 2.6E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2803 2830 7.0E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2546 2575 5.5E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2866 2898 1.5E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 763 793 3.2E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1280 1308 7.2E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2674 2703 3.7E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1106 1137 1.4E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 677 708 5.0E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1363 1394 6.3E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 SUPERFAMILY SSF51126 483 750 1.0E-22 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 2612 2639 1.0E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 678 707 7.7E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 2740 2766 3.7E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 2803 2830 2.8E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 1021 1050 2.1E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 1192 1221 4.5E-4 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 1827 1854 0.0032 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 2675 2703 1.2E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 421 449 0.35 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 1997 2025 2.6E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 1107 1136 2.9E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 2375 2404 5.9E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 764 793 1.2E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 2461 2490 3.1E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 1911 1940 1.6E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 1364 1393 7.7E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 1543 1569 0.0047 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 2547 2575 4.8E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 2868 2897 1.3E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 2092 2120 0.065 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 506 533 1.2E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 593 621 2.8E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 1280 1307 5.2E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 856 879 0.0051 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 1450 1478 3.5E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 Pfam PF12951 Passenger-associated-transport-repeat 938 965 1.4E-4 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12080 05d76ffac560003e886fa698db47e422 3397 SUPERFAMILY SSF51126 2077 2425 1.19E-20 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS08720 1caea05d1833a715dd2ab47e426c9d98 266 SUPERFAMILY SSF51735 7 257 1.43E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS08720 1caea05d1833a715dd2ab47e426c9d98 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 8.7E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS08720 1caea05d1833a715dd2ab47e426c9d98 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 8.7E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS08720 1caea05d1833a715dd2ab47e426c9d98 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 8.7E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS08720 1caea05d1833a715dd2ab47e426c9d98 266 Gene3D G3DSA:3.40.50.720 2 263 5.6E-46 T 28-03-2018 APY29_RS08720 1caea05d1833a715dd2ab47e426c9d98 266 Pfam PF00106 short chain dehydrogenase 8 189 2.8E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS08720 1caea05d1833a715dd2ab47e426c9d98 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.9E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS08720 1caea05d1833a715dd2ab47e426c9d98 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.9E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS08720 1caea05d1833a715dd2ab47e426c9d98 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.9E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS08720 1caea05d1833a715dd2ab47e426c9d98 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.9E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS08720 1caea05d1833a715dd2ab47e426c9d98 266 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 191 0.0023 T 28-03-2018 APY29_RS16765 502e7cc8fbe382e61a95280fdaae9bb2 304 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 72 142 6.3E-17 T 28-03-2018 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7799 APY29_RS16765 502e7cc8fbe382e61a95280fdaae9bb2 304 PIRSF PIRSF037208 56 303 1.0E-86 T 28-03-2018 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic MetaCyc: PWY-7799 APY29_RS16765 502e7cc8fbe382e61a95280fdaae9bb2 304 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 57 298 40.641 T 28-03-2018 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic MetaCyc: PWY-7799 APY29_RS16765 502e7cc8fbe382e61a95280fdaae9bb2 304 SUPERFAMILY SSF55729 136 295 4.94E-21 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS16765 502e7cc8fbe382e61a95280fdaae9bb2 304 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 162 288 3.1E-33 T 28-03-2018 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7799 APY29_RS16765 502e7cc8fbe382e61a95280fdaae9bb2 304 Gene3D G3DSA:3.40.630.30 131 288 6.6E-8 T 28-03-2018 APY29_RS06915 eba21775f045e428f5831c49c25934c9 534 Gene3D G3DSA:2.40.30.10 269 382 2.0E-18 T 28-03-2018 APY29_RS06915 eba21775f045e428f5831c49c25934c9 534 SUPERFAMILY SSF50447 259 391 1.09E-29 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain APY29_RS06915 eba21775f045e428f5831c49c25934c9 534 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site APY29_RS06915 eba21775f045e428f5831c49c25934c9 534 Pfam PF00009 Elongation factor Tu GTP binding domain 11 275 9.7E-48 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS06915 eba21775f045e428f5831c49c25934c9 534 SUPERFAMILY SSF54980 391 466 4.68E-17 T 28-03-2018 IPR035647 EF-G domain III/V-like APY29_RS06915 eba21775f045e428f5831c49c25934c9 534 Gene3D G3DSA:3.30.70.870 386 463 3.1E-10 T 28-03-2018 APY29_RS06915 eba21775f045e428f5831c49c25934c9 534 Pfam PF16658 Class II release factor RF3, C-terminal domain 385 512 4.0E-46 T 28-03-2018 IPR032090 Peptide chain release factor 3, C-terminal APY29_RS06915 eba21775f045e428f5831c49c25934c9 534 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 1 527 1.8E-253 T 28-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 APY29_RS06915 eba21775f045e428f5831c49c25934c9 534 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 157 1.2E-20 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 APY29_RS06915 eba21775f045e428f5831c49c25934c9 534 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 525 53.028 T 28-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 APY29_RS06915 eba21775f045e428f5831c49c25934c9 534 SUPERFAMILY SSF52540 8 275 3.11E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS06915 eba21775f045e428f5831c49c25934c9 534 PRINTS PR00315 GTP-binding elongation factor signature 63 71 2.2E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS06915 eba21775f045e428f5831c49c25934c9 534 PRINTS PR00315 GTP-binding elongation factor signature 83 93 2.2E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS06915 eba21775f045e428f5831c49c25934c9 534 PRINTS PR00315 GTP-binding elongation factor signature 13 26 2.2E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS06915 eba21775f045e428f5831c49c25934c9 534 PRINTS PR00315 GTP-binding elongation factor signature 135 144 2.2E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS06915 eba21775f045e428f5831c49c25934c9 534 PRINTS PR00315 GTP-binding elongation factor signature 99 110 2.2E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS06915 eba21775f045e428f5831c49c25934c9 534 Gene3D G3DSA:3.40.50.300 4 268 5.9E-36 T 28-03-2018 APY29_RS03075 f9ef66586cb93007f89cd16bb10656c3 436 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 318 329 - T 28-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APY29_RS03075 f9ef66586cb93007f89cd16bb10656c3 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 319 331 5.3E-27 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APY29_RS03075 f9ef66586cb93007f89cd16bb10656c3 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 5.3E-27 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APY29_RS03075 f9ef66586cb93007f89cd16bb10656c3 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 5.3E-27 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APY29_RS03075 f9ef66586cb93007f89cd16bb10656c3 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 369 385 5.3E-27 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APY29_RS03075 f9ef66586cb93007f89cd16bb10656c3 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 417 434 5.3E-27 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APY29_RS03075 f9ef66586cb93007f89cd16bb10656c3 436 SUPERFAMILY SSF48013 12 148 9.16E-25 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APY29_RS03075 f9ef66586cb93007f89cd16bb10656c3 436 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 432 1.2E-52 T 28-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APY29_RS03075 f9ef66586cb93007f89cd16bb10656c3 436 SUPERFAMILY SSF53335 144 434 2.81E-63 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS03075 f9ef66586cb93007f89cd16bb10656c3 436 Gene3D G3DSA:3.40.50.150 231 436 4.0E-48 T 28-03-2018 APY29_RS03075 f9ef66586cb93007f89cd16bb10656c3 436 Gene3D G3DSA:1.10.287.730 146 170 0.0011 T 28-03-2018 APY29_RS03075 f9ef66586cb93007f89cd16bb10656c3 436 Gene3D G3DSA:3.30.70.1170 173 230 1.0E-13 T 28-03-2018 APY29_RS03075 f9ef66586cb93007f89cd16bb10656c3 436 Gene3D G3DSA:1.10.940.10 8 143 2.0E-19 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APY29_RS03075 f9ef66586cb93007f89cd16bb10656c3 436 Pfam PF01029 NusB family 12 133 4.5E-17 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APY29_RS03075 f9ef66586cb93007f89cd16bb10656c3 436 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 43 434 4.9E-97 T 28-03-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APY29_RS20380 9b4e03305d6258e3a7e828333b7276d3 276 SUPERFAMILY SSF51735 6 260 7.41E-62 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS20380 9b4e03305d6258e3a7e828333b7276d3 276 Pfam PF00106 short chain dehydrogenase 8 189 3.7E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20380 9b4e03305d6258e3a7e828333b7276d3 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.6E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20380 9b4e03305d6258e3a7e828333b7276d3 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.6E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20380 9b4e03305d6258e3a7e828333b7276d3 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.6E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20380 9b4e03305d6258e3a7e828333b7276d3 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.6E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20380 9b4e03305d6258e3a7e828333b7276d3 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.6E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20380 9b4e03305d6258e3a7e828333b7276d3 276 Gene3D G3DSA:3.40.50.720 5 267 2.8E-58 T 28-03-2018 APY29_RS20380 9b4e03305d6258e3a7e828333b7276d3 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 6.2E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20380 9b4e03305d6258e3a7e828333b7276d3 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 6.2E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20380 9b4e03305d6258e3a7e828333b7276d3 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 6.2E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS22325 037cd676dd1239a67c1aeb8b6e6f3d19 245 Pfam PF00005 ABC transporter 17 162 2.6E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS22325 037cd676dd1239a67c1aeb8b6e6f3d19 245 Gene3D G3DSA:3.40.50.300 1 244 1.6E-67 T 28-03-2018 APY29_RS22325 037cd676dd1239a67c1aeb8b6e6f3d19 245 SMART SM00382 26 220 5.8E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS22325 037cd676dd1239a67c1aeb8b6e6f3d19 245 SUPERFAMILY SSF52540 1 237 3.63E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS22325 037cd676dd1239a67c1aeb8b6e6f3d19 245 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS02970 4a65b5b1dbb52ff9a84f1a63622dee0d 268 Gene3D G3DSA:3.40.50.1010 1 147 1.8E-21 T 28-03-2018 IPR029060 PIN domain-like APY29_RS02970 4a65b5b1dbb52ff9a84f1a63622dee0d 268 Pfam PF01936 NYN domain 10 144 1.1E-30 T 28-03-2018 IPR021139 NYN domain, limkain-b1-type APY29_RS02970 4a65b5b1dbb52ff9a84f1a63622dee0d 268 Pfam PF12872 OST-HTH/LOTUS domain 170 233 4.6E-15 T 28-03-2018 IPR025605 OST-HTH/LOTUS domain APY29_RS21795 4f9d8d09c475f27bffb9234c03b4b475 364 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 364 49.578 T 28-03-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 APY29_RS21795 4f9d8d09c475f27bffb9234c03b4b475 364 Pfam PF03969 AFG1-like ATPase 4 359 5.6E-127 T 28-03-2018 IPR005654 ATPase, AFG1-like GO:0005524 APY29_RS21795 4f9d8d09c475f27bffb9234c03b4b475 364 SUPERFAMILY SSF52540 51 175 9.61E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS21795 4f9d8d09c475f27bffb9234c03b4b475 364 Gene3D G3DSA:3.40.50.300 22 360 4.4E-13 T 28-03-2018 APY29_RS02925 a4f20fb4d40c052ec85653601412eb85 569 Gene3D G3DSA:3.40.50.300 13 236 1.0E-53 T 28-03-2018 APY29_RS02925 a4f20fb4d40c052ec85653601412eb85 569 SMART SM00487 28 235 6.1E-56 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APY29_RS02925 a4f20fb4d40c052ec85653601412eb85 569 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 390 50.905 T 28-03-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 APY29_RS02925 a4f20fb4d40c052ec85653601412eb85 569 Gene3D G3DSA:3.40.50.300 237 521 8.8E-46 T 28-03-2018 APY29_RS02925 a4f20fb4d40c052ec85653601412eb85 569 Pfam PF00270 DEAD/DEAH box helicase 33 206 2.5E-45 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APY29_RS02925 a4f20fb4d40c052ec85653601412eb85 569 SUPERFAMILY SSF52540 84 363 9.29E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS02925 a4f20fb4d40c052ec85653601412eb85 569 SMART SM00490 271 352 1.0E-31 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS02925 a4f20fb4d40c052ec85653601412eb85 569 Pfam PF12300 ATP-dependent RNA helicase RhlB 377 547 3.0E-63 T 28-03-2018 IPR022077 ATP-dependent RNA helicase RhlB GO:0016817 APY29_RS02925 a4f20fb4d40c052ec85653601412eb85 569 Pfam PF00271 Helicase conserved C-terminal domain 245 352 2.5E-28 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS02925 a4f20fb4d40c052ec85653601412eb85 569 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 164 172 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APY29_RS00825 f934bf5cb98c3161b4075ba5b203fb73 164 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 107 131 - T 28-03-2018 IPR020935 Phosphodiesterase YfcE, conserved site APY29_RS00825 f934bf5cb98c3161b4075ba5b203fb73 164 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 16 145 2.3E-22 T 28-03-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 APY29_RS00825 f934bf5cb98c3161b4075ba5b203fb73 164 SUPERFAMILY SSF56300 15 160 1.26E-35 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like APY29_RS00825 f934bf5cb98c3161b4075ba5b203fb73 164 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 16 147 3.5E-30 T 28-03-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 APY29_RS00825 f934bf5cb98c3161b4075ba5b203fb73 164 Gene3D G3DSA:3.60.21.10 15 157 3.6E-21 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like APY29_RS22685 c1244975b7d93286bfbc0a0af022e171 548 Gene3D G3DSA:3.30.420.40 272 537 2.9E-57 T 28-03-2018 APY29_RS22685 c1244975b7d93286bfbc0a0af022e171 548 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 285 481 2.0E-29 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APY29_RS22685 c1244975b7d93286bfbc0a0af022e171 548 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 16 273 4.1E-34 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APY29_RS22685 c1244975b7d93286bfbc0a0af022e171 548 PIRSF PIRSF000538 14 532 1.1E-89 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 APY29_RS22685 c1244975b7d93286bfbc0a0af022e171 548 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 20 27 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 APY29_RS22685 c1244975b7d93286bfbc0a0af022e171 548 Gene3D G3DSA:3.30.420.40 12 271 7.6E-53 T 28-03-2018 APY29_RS22685 c1244975b7d93286bfbc0a0af022e171 548 SUPERFAMILY SSF53067 276 528 9.72E-59 T 28-03-2018 APY29_RS22685 c1244975b7d93286bfbc0a0af022e171 548 SUPERFAMILY SSF53067 16 275 2.2E-43 T 28-03-2018 APY29_RS10120 319d9c19b69c974eecbf257ea8f3c563 232 SUPERFAMILY SSF47616 89 222 2.09E-24 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like APY29_RS10120 319d9c19b69c974eecbf257ea8f3c563 232 Pfam PF00043 Glutathione S-transferase, C-terminal domain 155 211 1.9E-8 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal APY29_RS10120 319d9c19b69c974eecbf257ea8f3c563 232 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 74 2.2E-15 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APY29_RS10120 319d9c19b69c974eecbf257ea8f3c563 232 SUPERFAMILY SSF52833 1 81 1.1E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS10120 319d9c19b69c974eecbf257ea8f3c563 232 Gene3D G3DSA:1.20.1050.10 102 223 1.4E-25 T 28-03-2018 APY29_RS10120 319d9c19b69c974eecbf257ea8f3c563 232 Gene3D G3DSA:3.40.30.10 1 101 5.8E-25 T 28-03-2018 APY29_RS07920 0b3ae2f3da1e1a4937b207aca959d30a 503 Gene3D G3DSA:1.20.1600.10 20 489 1.5E-110 T 28-03-2018 APY29_RS07920 0b3ae2f3da1e1a4937b207aca959d30a 503 SUPERFAMILY SSF56954 3 32 7.06E-116 T 28-03-2018 APY29_RS07920 0b3ae2f3da1e1a4937b207aca959d30a 503 SUPERFAMILY SSF56954 69 486 7.06E-116 T 28-03-2018 APY29_RS07920 0b3ae2f3da1e1a4937b207aca959d30a 503 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 14 483 5.1E-126 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APY29_RS07920 0b3ae2f3da1e1a4937b207aca959d30a 503 Pfam PF02321 Outer membrane efflux protein 78 268 2.4E-23 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS07920 0b3ae2f3da1e1a4937b207aca959d30a 503 Pfam PF02321 Outer membrane efflux protein 298 481 4.0E-31 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS17610 a50546a3de7f26855cace22585768196 430 SUPERFAMILY SSF109998 244 428 4.32E-38 T 28-03-2018 IPR027304 Trigger factor/SurA domain APY29_RS17610 a50546a3de7f26855cace22585768196 430 Gene3D G3DSA:1.10.3120.10 207 389 6.4E-34 T 28-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APY29_RS17610 a50546a3de7f26855cace22585768196 430 Hamap MF_00303 Trigger factor [tig]. 1 418 17.544 T 28-03-2018 IPR005215 Trigger factor GO:0015031 APY29_RS17610 a50546a3de7f26855cace22585768196 430 Pfam PF05697 Bacterial trigger factor protein (TF) 1 140 3.0E-35 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APY29_RS17610 a50546a3de7f26855cace22585768196 430 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 260 413 1.8E-36 T 28-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APY29_RS17610 a50546a3de7f26855cace22585768196 430 Gene3D G3DSA:3.30.70.1050 1 112 1.5E-27 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APY29_RS17610 a50546a3de7f26855cace22585768196 430 TIGRFAM TIGR00115 tig: trigger factor 11 411 1.5E-108 T 28-03-2018 IPR005215 Trigger factor GO:0015031 APY29_RS17610 a50546a3de7f26855cace22585768196 430 PIRSF PIRSF003095 1 428 7.1E-104 T 28-03-2018 IPR005215 Trigger factor GO:0015031 APY29_RS17610 a50546a3de7f26855cace22585768196 430 SUPERFAMILY SSF102735 1 125 1.02E-30 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APY29_RS17610 a50546a3de7f26855cace22585768196 430 SUPERFAMILY SSF54534 128 242 8.35E-17 T 28-03-2018 APY29_RS12895 8190d3ac8547b6a2f3079407f3d7b513 135 Pfam PF04347 Flagellar biosynthesis protein, FliO 47 131 1.9E-24 T 28-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 APY29_RS12895 8190d3ac8547b6a2f3079407f3d7b513 135 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 35 102 4.2E-23 T 28-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 APY29_RS08540 f817f33d642d951ef3a1e266d88276e7 336 SMART SM00382 126 258 3.2E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS08540 f817f33d642d951ef3a1e266d88276e7 336 Gene3D G3DSA:3.40.50.300 63 334 8.1E-35 T 28-03-2018 APY29_RS08540 f817f33d642d951ef3a1e266d88276e7 336 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 130 255 1.9E-28 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APY29_RS08540 f817f33d642d951ef3a1e266d88276e7 336 SUPERFAMILY SSF52540 87 325 1.06E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS05970 5985ecc92e085b7a8d3418d94347f27a 293 Gene3D G3DSA:1.25.40.10 184 278 0.038 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS05970 5985ecc92e085b7a8d3418d94347f27a 293 SUPERFAMILY SSF48452 42 124 8.5E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS05970 5985ecc92e085b7a8d3418d94347f27a 293 Pfam PF13525 Outer membrane lipoprotein 40 244 3.1E-57 T 28-03-2018 APY29_RS05970 5985ecc92e085b7a8d3418d94347f27a 293 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 12 258 5.2E-79 T 28-03-2018 IPR017689 Outer membrane protein assembly factor BamD APY29_RS05970 5985ecc92e085b7a8d3418d94347f27a 293 Gene3D G3DSA:1.25.40.10 42 67 0.043 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS05970 5985ecc92e085b7a8d3418d94347f27a 293 Gene3D G3DSA:1.25.40.10 68 182 9.3E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS05970 5985ecc92e085b7a8d3418d94347f27a 293 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 10 252 34.951 T 28-03-2018 IPR017689 Outer membrane protein assembly factor BamD APY29_RS10850 5edbecfc1ca5d500d892011561c0c249 163 Pfam PF07681 DoxX 15 109 1.1E-15 T 28-03-2018 IPR032808 DoxX family APY29_RS16380 f78adef5cb1b4ba6a4bfe53e1ad7b021 57 Pfam PF01578 Cytochrome C assembly protein 2 52 3.8E-9 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APY29_RS14550 7133b502a462c9faa45b089d10f7b095 513 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 4 504 44.973 T 28-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 APY29_RS14550 7133b502a462c9faa45b089d10f7b095 513 Gene3D G3DSA:1.10.275.10 3 197 1.0E-67 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal APY29_RS14550 7133b502a462c9faa45b089d10f7b095 513 Pfam PF00221 Aromatic amino acid lyase 13 470 6.4E-180 T 28-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 APY29_RS14550 7133b502a462c9faa45b089d10f7b095 513 Gene3D G3DSA:1.20.200.10 199 507 1.2E-118 T 28-03-2018 APY29_RS14550 7133b502a462c9faa45b089d10f7b095 513 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 28-03-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 APY29_RS14550 7133b502a462c9faa45b089d10f7b095 513 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 503 4.6E-204 T 28-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 APY29_RS14550 7133b502a462c9faa45b089d10f7b095 513 SUPERFAMILY SSF48557 5 499 1.73E-184 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 APY29_RS01470 08150e5001f939c1b4fe5fd55ca64ab5 179 Pfam PF07638 ECF sigma factor 6 179 2.1E-30 T 28-03-2018 IPR011517 RNA polymerase sigma-70 ECF-like APY29_RS01470 08150e5001f939c1b4fe5fd55ca64ab5 179 Gene3D G3DSA:1.10.1740.10 1 106 2.1E-10 T 28-03-2018 APY29_RS01470 08150e5001f939c1b4fe5fd55ca64ab5 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 178 1.6E-15 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS01470 08150e5001f939c1b4fe5fd55ca64ab5 179 Gene3D G3DSA:1.10.10.10 119 178 6.4E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS01470 08150e5001f939c1b4fe5fd55ca64ab5 179 SUPERFAMILY SSF88946 2 104 2.59E-8 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS01470 08150e5001f939c1b4fe5fd55ca64ab5 179 SUPERFAMILY SSF88659 121 178 2.3E-7 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS01470 08150e5001f939c1b4fe5fd55ca64ab5 179 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 4 179 2.2E-57 T 28-03-2018 IPR011517 RNA polymerase sigma-70 ECF-like APY29_RS17065 afe110d2b19f478cef5d0998e6eaf112 192 SUPERFAMILY SSF54292 22 109 6.95E-27 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APY29_RS17065 afe110d2b19f478cef5d0998e6eaf112 192 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 61 69 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APY29_RS17065 afe110d2b19f478cef5d0998e6eaf112 192 Pfam PF01799 [2Fe-2S] binding domain 95 167 7.1E-30 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APY29_RS17065 afe110d2b19f478cef5d0998e6eaf112 192 Gene3D G3DSA:3.10.20.30 21 96 1.8E-27 T 28-03-2018 IPR012675 Beta-grasp domain APY29_RS17065 afe110d2b19f478cef5d0998e6eaf112 192 SUPERFAMILY SSF47741 106 176 1.01E-28 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APY29_RS17065 afe110d2b19f478cef5d0998e6eaf112 192 Gene3D G3DSA:1.10.150.120 97 188 6.6E-35 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APY29_RS17065 afe110d2b19f478cef5d0998e6eaf112 192 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 28 77 5.8E-6 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APY29_RS12140 2499113a728d4087699d80f5f8d03f38 189 Pfam PF12804 MobA-like NTP transferase domain 9 151 2.7E-28 T 28-03-2018 IPR025877 MobA-like NTP transferase APY29_RS12140 2499113a728d4087699d80f5f8d03f38 189 Gene3D G3DSA:3.90.550.10 5 186 3.8E-22 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS12140 2499113a728d4087699d80f5f8d03f38 189 SUPERFAMILY SSF53448 7 180 7.43E-28 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS12140 2499113a728d4087699d80f5f8d03f38 189 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 183 18.736 T 28-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 APY29_RS16920 e0a16d944a8619731a6e9afafd23f939 703 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 374 382 - T 28-03-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS16920 e0a16d944a8619731a6e9afafd23f939 703 SMART SM01060 44 432 3.5E-277 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS16920 e0a16d944a8619731a6e9afafd23f939 703 Pfam PF06628 Catalase-related immune-responsive 458 520 7.5E-22 T 28-03-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS16920 e0a16d944a8619731a6e9afafd23f939 703 Gene3D G3DSA:3.40.50.880 557 703 5.5E-11 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS16920 e0a16d944a8619731a6e9afafd23f939 703 Gene3D G3DSA:2.40.180.10 17 399 1.9E-159 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS16920 e0a16d944a8619731a6e9afafd23f939 703 SUPERFAMILY SSF56634 35 532 3.14E-217 T 28-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS16920 e0a16d944a8619731a6e9afafd23f939 703 Pfam PF00199 Catalase 44 429 3.2E-179 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS16920 e0a16d944a8619731a6e9afafd23f939 703 PIRSF PIRSF038927 17 701 1.0E-293 T 28-03-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APY29_RS16920 e0a16d944a8619731a6e9afafd23f939 703 SUPERFAMILY SSF52317 555 675 7.63E-13 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS16920 e0a16d944a8619731a6e9afafd23f939 703 ProSitePatterns PS00438 Catalase proximal active site signature. 80 96 - T 28-03-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS16920 e0a16d944a8619731a6e9afafd23f939 703 PRINTS PR00067 Catalase signature 361 387 1.8E-68 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS16920 e0a16d944a8619731a6e9afafd23f939 703 PRINTS PR00067 Catalase signature 57 80 1.8E-68 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS16920 e0a16d944a8619731a6e9afafd23f939 703 PRINTS PR00067 Catalase signature 141 158 1.8E-68 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS16920 e0a16d944a8619731a6e9afafd23f939 703 PRINTS PR00067 Catalase signature 329 356 1.8E-68 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS16920 e0a16d944a8619731a6e9afafd23f939 703 PRINTS PR00067 Catalase signature 160 178 1.8E-68 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS16920 e0a16d944a8619731a6e9afafd23f939 703 PRINTS PR00067 Catalase signature 120 138 1.8E-68 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS17565 ed1725a273364cccf31d9345437c0616 392 SMART SM00257 345 389 5.4E-10 T 28-03-2018 IPR018392 LysM domain APY29_RS17565 ed1725a273364cccf31d9345437c0616 392 Pfam PF01464 Transglycosylase SLT domain 100 204 1.6E-22 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 APY29_RS17565 ed1725a273364cccf31d9345437c0616 392 SUPERFAMILY SSF54106 344 387 5.23E-9 T 28-03-2018 IPR018392 LysM domain APY29_RS17565 ed1725a273364cccf31d9345437c0616 392 Pfam PF01476 LysM domain 346 387 1.1E-10 T 28-03-2018 IPR018392 LysM domain APY29_RS17565 ed1725a273364cccf31d9345437c0616 392 SUPERFAMILY SSF53955 90 239 4.31E-32 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS17565 ed1725a273364cccf31d9345437c0616 392 Gene3D G3DSA:1.10.530.10 16 237 1.9E-28 T 28-03-2018 APY29_RS17565 ed1725a273364cccf31d9345437c0616 392 Gene3D G3DSA:3.10.350.10 332 391 4.5E-12 T 28-03-2018 APY29_RS12670 5e6bebc69e05ab6f84f75da36bb9300e 133 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site APY29_RS12670 5e6bebc69e05ab6f84f75da36bb9300e 133 Pfam PF00460 Flagella basal body rod protein 11 39 7.9E-8 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 APY29_RS12670 5e6bebc69e05ab6f84f75da36bb9300e 133 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 130 3.7E-29 T 28-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 APY29_RS12670 5e6bebc69e05ab6f84f75da36bb9300e 133 PIRSF PIRSF002889 1 133 5.3E-35 T 28-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 APY29_RS02035 6d623292d81dfe639e10ee6a5b44778b 193 SUPERFAMILY SSF48403 45 173 2.65E-31 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS02035 6d623292d81dfe639e10ee6a5b44778b 193 SMART SM00248 109 138 35.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS02035 6d623292d81dfe639e10ee6a5b44778b 193 SMART SM00248 43 72 4500.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS02035 6d623292d81dfe639e10ee6a5b44778b 193 SMART SM00248 142 171 8.5 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS02035 6d623292d81dfe639e10ee6a5b44778b 193 SMART SM00248 76 105 0.0059 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS02035 6d623292d81dfe639e10ee6a5b44778b 193 Gene3D G3DSA:1.25.40.20 25 137 5.7E-30 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS02035 6d623292d81dfe639e10ee6a5b44778b 193 Pfam PF12796 Ankyrin repeats (3 copies) 50 136 4.0E-11 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS02035 6d623292d81dfe639e10ee6a5b44778b 193 Gene3D G3DSA:1.25.40.20 138 184 3.1E-8 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS21875 f0ee7a2f17b93ce51acdadeea9d18ad5 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 1.9E-16 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS21875 f0ee7a2f17b93ce51acdadeea9d18ad5 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 9.3E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS21875 f0ee7a2f17b93ce51acdadeea9d18ad5 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 9.3E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS21875 f0ee7a2f17b93ce51acdadeea9d18ad5 206 Gene3D G3DSA:1.10.357.10 68 206 7.0E-23 T 28-03-2018 APY29_RS21875 f0ee7a2f17b93ce51acdadeea9d18ad5 206 Gene3D G3DSA:1.10.10.60 13 67 2.7E-19 T 28-03-2018 APY29_RS21875 f0ee7a2f17b93ce51acdadeea9d18ad5 206 SUPERFAMILY SSF48498 87 200 2.03E-11 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APY29_RS21875 f0ee7a2f17b93ce51acdadeea9d18ad5 206 SUPERFAMILY SSF46689 10 92 2.74E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS17885 d09dbf45d5693efcdb25c6943974358d 609 SUPERFAMILY SSF52540 3 208 7.34E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17885 d09dbf45d5693efcdb25c6943974358d 609 Pfam PF03144 Elongation factor Tu domain 2 220 290 5.1E-10 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 APY29_RS17885 d09dbf45d5693efcdb25c6943974358d 609 Gene3D G3DSA:2.40.30.10 188 301 7.5E-23 T 28-03-2018 APY29_RS17885 d09dbf45d5693efcdb25c6943974358d 609 PRINTS PR00315 GTP-binding elongation factor signature 52 60 5.6E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS17885 d09dbf45d5693efcdb25c6943974358d 609 PRINTS PR00315 GTP-binding elongation factor signature 124 133 5.6E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS17885 d09dbf45d5693efcdb25c6943974358d 609 PRINTS PR00315 GTP-binding elongation factor signature 72 82 5.6E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS17885 d09dbf45d5693efcdb25c6943974358d 609 PRINTS PR00315 GTP-binding elongation factor signature 8 21 5.6E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS17885 d09dbf45d5693efcdb25c6943974358d 609 SUPERFAMILY SSF50447 152 300 1.39E-33 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain APY29_RS17885 d09dbf45d5693efcdb25c6943974358d 609 Gene3D G3DSA:3.40.50.300 69 187 1.0E-29 T 28-03-2018 APY29_RS17885 d09dbf45d5693efcdb25c6943974358d 609 Pfam PF00009 Elongation factor Tu GTP binding domain 5 195 1.8E-54 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS17885 d09dbf45d5693efcdb25c6943974358d 609 SUPERFAMILY SSF54980 303 392 1.15E-14 T 28-03-2018 IPR035647 EF-G domain III/V-like APY29_RS17885 d09dbf45d5693efcdb25c6943974358d 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 140 9.3E-25 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 APY29_RS17885 d09dbf45d5693efcdb25c6943974358d 609 SMART SM00838 400 488 1.6E-4 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like APY29_RS17885 d09dbf45d5693efcdb25c6943974358d 609 Gene3D G3DSA:2.40.50.250 488 578 4.4E-34 T 28-03-2018 APY29_RS17885 d09dbf45d5693efcdb25c6943974358d 609 Gene3D G3DSA:3.40.50.300 2 68 7.5E-11 T 28-03-2018 APY29_RS17885 d09dbf45d5693efcdb25c6943974358d 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site APY29_RS17885 d09dbf45d5693efcdb25c6943974358d 609 Gene3D G3DSA:3.30.70.240 406 486 3.3E-21 T 28-03-2018 APY29_RS17885 d09dbf45d5693efcdb25c6943974358d 609 Pfam PF00679 Elongation factor G C-terminus 401 480 6.0E-23 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like APY29_RS17885 d09dbf45d5693efcdb25c6943974358d 609 Gene3D G3DSA:3.30.70.870 303 405 9.9E-31 T 28-03-2018 APY29_RS17885 d09dbf45d5693efcdb25c6943974358d 609 SUPERFAMILY SSF54980 403 516 8.63E-26 T 28-03-2018 IPR035647 EF-G domain III/V-like APY29_RS17885 d09dbf45d5693efcdb25c6943974358d 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 604 1.3E-280 T 28-03-2018 IPR006298 GTP-binding protein TypA GO:0005525 APY29_RS18035 d7c48c869128bf389f8698c65ad6869e 89 SUPERFAMILY SSF54570 3 82 6.15E-34 T 28-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18035 d7c48c869128bf389f8698c65ad6869e 89 ProSitePatterns PS00323 Ribosomal protein S19 signature. 51 75 - T 28-03-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18035 d7c48c869128bf389f8698c65ad6869e 89 Gene3D G3DSA:3.30.860.10 1 89 2.5E-38 T 28-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18035 d7c48c869128bf389f8698c65ad6869e 89 PIRSF PIRSF002144 1 89 5.4E-32 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18035 d7c48c869128bf389f8698c65ad6869e 89 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 87 25.188 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18035 d7c48c869128bf389f8698c65ad6869e 89 Pfam PF00203 Ribosomal protein S19 3 81 8.6E-36 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18035 d7c48c869128bf389f8698c65ad6869e 89 PRINTS PR00975 Ribosomal protein S19 family signature 51 63 1.2E-22 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18035 d7c48c869128bf389f8698c65ad6869e 89 PRINTS PR00975 Ribosomal protein S19 family signature 63 78 1.2E-22 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18035 d7c48c869128bf389f8698c65ad6869e 89 PRINTS PR00975 Ribosomal protein S19 family signature 31 50 1.2E-22 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18035 d7c48c869128bf389f8698c65ad6869e 89 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 87 2.0E-42 T 28-03-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 APY29_RS16760 1875fb28bacbb45fb791a14c0a9c0f1f 199 Gene3D G3DSA:1.10.238.10 125 152 2.5E-5 T 28-03-2018 APY29_RS16760 1875fb28bacbb45fb791a14c0a9c0f1f 199 Pfam PF13499 EF-hand domain pair 58 110 5.5E-8 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 APY29_RS16760 1875fb28bacbb45fb791a14c0a9c0f1f 199 Pfam PF13202 EF hand 37 50 0.0028 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 APY29_RS16760 1875fb28bacbb45fb791a14c0a9c0f1f 199 Pfam PF13202 EF hand 120 134 0.0028 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 APY29_RS16760 1875fb28bacbb45fb791a14c0a9c0f1f 199 Pfam PF13202 EF hand 147 166 4.5E-6 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 APY29_RS16760 1875fb28bacbb45fb791a14c0a9c0f1f 199 Gene3D G3DSA:1.10.238.10 153 175 0.0071 T 28-03-2018 APY29_RS16760 1875fb28bacbb45fb791a14c0a9c0f1f 199 SUPERFAMILY SSF47473 59 167 2.14E-15 T 28-03-2018 IPR011992 EF-hand domain pair APY29_RS16760 1875fb28bacbb45fb791a14c0a9c0f1f 199 Gene3D G3DSA:1.10.1330.10 69 101 3.8E-6 T 28-03-2018 APY29_RS16760 1875fb28bacbb45fb791a14c0a9c0f1f 199 ProSitePatterns PS00018 EF-hand calcium-binding domain. 153 165 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site APY29_RS16760 1875fb28bacbb45fb791a14c0a9c0f1f 199 Gene3D G3DSA:1.10.238.10 21 45 0.15 T 28-03-2018 APY29_RS16760 1875fb28bacbb45fb791a14c0a9c0f1f 199 Gene3D G3DSA:1.10.238.10 102 124 4.6E-5 T 28-03-2018 APY29_RS16760 1875fb28bacbb45fb791a14c0a9c0f1f 199 Gene3D G3DSA:1.10.238.10 46 68 6.0E-6 T 28-03-2018 APY29_RS00035 0359c1395d79bcd466a3e17bd29438e3 397 SUPERFAMILY SSF48452 320 382 3.56E-18 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS00035 0359c1395d79bcd466a3e17bd29438e3 397 SUPERFAMILY SSF48452 179 281 3.56E-18 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS00035 0359c1395d79bcd466a3e17bd29438e3 397 SMART SM00028 354 386 140.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS00035 0359c1395d79bcd466a3e17bd29438e3 397 SMART SM00028 320 353 14.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS00035 0359c1395d79bcd466a3e17bd29438e3 397 SMART SM00028 179 212 0.073 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS00035 0359c1395d79bcd466a3e17bd29438e3 397 SMART SM00028 106 139 150.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS00035 0359c1395d79bcd466a3e17bd29438e3 397 Gene3D G3DSA:1.25.40.10 200 301 3.7E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS00035 0359c1395d79bcd466a3e17bd29438e3 397 Pfam PF09295 ChAPs (Chs5p-Arf1p-binding proteins) 145 245 1.3E-4 T 28-03-2018 IPR015374 Chs5p-Arf1p binding APY29_RS00035 0359c1395d79bcd466a3e17bd29438e3 397 SUPERFAMILY SSF48452 93 222 2.01E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS00035 0359c1395d79bcd466a3e17bd29438e3 397 Gene3D G3DSA:1.25.40.10 319 363 1.2E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS00035 0359c1395d79bcd466a3e17bd29438e3 397 Gene3D G3DSA:1.25.40.10 364 396 0.011 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS00035 0359c1395d79bcd466a3e17bd29438e3 397 Gene3D G3DSA:1.25.40.10 35 199 8.7E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS15895 1e07635fd4dd042a32fe80f353e8ec4d 356 SUPERFAMILY SSF53335 79 352 4.14E-60 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS15895 1e07635fd4dd042a32fe80f353e8ec4d 356 Pfam PF02353 Mycolic acid cyclopropane synthetase 77 338 2.5E-36 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS15895 1e07635fd4dd042a32fe80f353e8ec4d 356 Gene3D G3DSA:3.40.50.150 71 352 1.4E-47 T 28-03-2018 APY29_RS01425 9e41e63971205d55a44a9861e4ed676b 675 Gene3D G3DSA:2.80.10.50 314 443 5.3E-6 T 28-03-2018 APY29_RS01425 9e41e63971205d55a44a9861e4ed676b 675 SUPERFAMILY SSF50405 362 433 1.23E-5 T 28-03-2018 IPR008999 Actin cross-linking APY29_RS19135 972e2d39ab1d088ade2d6dbc85c82a0f 90 Pfam PF07007 Lysozyme inhibitor LprI 25 82 2.7E-8 T 28-03-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 Gene3D G3DSA:1.25.40.10 554 659 4.2E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 Gene3D G3DSA:1.25.40.10 444 553 1.8E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 SUPERFAMILY SSF48452 685 801 1.6E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 SUPERFAMILY SSF48452 34 183 9.11E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 Pfam PF14559 Tetratricopeptide repeat 385 440 1.2E-7 T 28-03-2018 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 Pfam PF14559 Tetratricopeptide repeat 460 527 8.7E-9 T 28-03-2018 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 Gene3D G3DSA:1.25.40.10 122 258 0.024 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 PRINTS PR01441 Cellulose synthase subunit C signature 138 150 1.4E-13 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 PRINTS PR01441 Cellulose synthase subunit C signature 168 185 1.4E-13 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 PRINTS PR01441 Cellulose synthase subunit C signature 728 756 1.4E-13 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 PRINTS PR01441 Cellulose synthase subunit C signature 482 502 1.4E-13 T 28-03-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 Gene3D G3DSA:1.25.40.10 268 343 1.3E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 Gene3D G3DSA:1.25.40.10 675 728 2.3E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 Gene3D G3DSA:1.25.40.10 729 811 9.0E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 Gene3D G3DSA:1.25.40.10 373 438 1.4E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 Gene3D G3DSA:1.25.40.10 22 121 3.6E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 Gene3D G3DSA:1.25.40.10 344 372 3.9E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 SUPERFAMILY SSF48452 452 542 2.09E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 Pfam PF13432 Tetratricopeptide repeat 680 743 0.0017 T 28-03-2018 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 Pfam PF13432 Tetratricopeptide repeat 44 96 0.0011 T 28-03-2018 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 Pfam PF13432 Tetratricopeptide repeat 749 808 1.5E-4 T 28-03-2018 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 Pfam PF13432 Tetratricopeptide repeat 274 322 9.5E-4 T 28-03-2018 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 990 1472 1.2E-101 T 28-03-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 SMART SM00028 374 406 240.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 SMART SM00028 744 777 11.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 SMART SM00028 778 811 3.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 SMART SM00028 32 65 19.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 SMART SM00028 340 373 24.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 SMART SM00028 710 743 0.19 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 SUPERFAMILY SSF48452 354 431 3.64E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS04610 d6436bf311a11e533faf4564c53559ec 1493 SUPERFAMILY SSF48452 271 321 3.64E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS13455 6cd3fde71c660cfbfed17cce3822955c 232 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 6 227 3.0E-79 T 28-03-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 APY29_RS13455 6cd3fde71c660cfbfed17cce3822955c 232 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 3 230 40.021 T 28-03-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 APY29_RS13455 6cd3fde71c660cfbfed17cce3822955c 232 Gene3D G3DSA:3.40.50.1000 73 232 1.8E-15 T 28-03-2018 IPR023214 HAD-like domain APY29_RS13455 6cd3fde71c660cfbfed17cce3822955c 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 117 197 2.6E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS13455 6cd3fde71c660cfbfed17cce3822955c 232 SUPERFAMILY SSF56784 1 230 9.47E-58 T 28-03-2018 IPR023214 HAD-like domain APY29_RS10735 cf06a6919615afcd0a3d15a3032255f5 231 Pfam PF00440 Bacterial regulatory proteins, tetR family 31 77 4.3E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS10735 cf06a6919615afcd0a3d15a3032255f5 231 SUPERFAMILY SSF48498 103 219 9.78E-5 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APY29_RS10735 cf06a6919615afcd0a3d15a3032255f5 231 Gene3D G3DSA:1.10.10.60 2 77 9.0E-16 T 28-03-2018 APY29_RS10735 cf06a6919615afcd0a3d15a3032255f5 231 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 44 4.5E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS10735 cf06a6919615afcd0a3d15a3032255f5 231 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 52 75 4.5E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS10735 cf06a6919615afcd0a3d15a3032255f5 231 Gene3D G3DSA:1.10.357.10 78 224 5.9E-19 T 28-03-2018 APY29_RS10735 cf06a6919615afcd0a3d15a3032255f5 231 SUPERFAMILY SSF46689 18 102 1.33E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS10735 cf06a6919615afcd0a3d15a3032255f5 231 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 176 217 9.7E-5 T 28-03-2018 APY29_RS10905 e8a5afdde6a0bda9b27f93241d8eb649 792 Gene3D G3DSA:3.30.1490.20 1 194 3.2E-51 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APY29_RS10905 e8a5afdde6a0bda9b27f93241d8eb649 792 Gene3D G3DSA:3.30.470.20 195 356 3.3E-41 T 28-03-2018 APY29_RS10905 e8a5afdde6a0bda9b27f93241d8eb649 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 384 455 1.1E-24 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APY29_RS10905 e8a5afdde6a0bda9b27f93241d8eb649 792 SUPERFAMILY SSF56059 3 385 9.3E-103 T 28-03-2018 APY29_RS10905 e8a5afdde6a0bda9b27f93241d8eb649 792 Gene3D G3DSA:3.50.30.10 357 474 5.8E-35 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APY29_RS10905 e8a5afdde6a0bda9b27f93241d8eb649 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 414 425 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 APY29_RS10905 e8a5afdde6a0bda9b27f93241d8eb649 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 789 0.0 T 28-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 APY29_RS10905 e8a5afdde6a0bda9b27f93241d8eb649 792 PIRSF PIRSF000854 1 792 0.0 T 28-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 APY29_RS10905 e8a5afdde6a0bda9b27f93241d8eb649 792 SUPERFAMILY SSF52009 352 465 4.32E-32 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APY29_RS10905 e8a5afdde6a0bda9b27f93241d8eb649 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 482 788 4.9E-61 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 APY29_RS10905 e8a5afdde6a0bda9b27f93241d8eb649 792 SUPERFAMILY SSF51621 463 789 1.02E-95 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APY29_RS10905 e8a5afdde6a0bda9b27f93241d8eb649 792 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 711 726 2.9E-6 T 28-03-2018 APY29_RS10905 e8a5afdde6a0bda9b27f93241d8eb649 792 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 694 709 2.9E-6 T 28-03-2018 APY29_RS10905 e8a5afdde6a0bda9b27f93241d8eb649 792 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 747 759 2.9E-6 T 28-03-2018 APY29_RS10905 e8a5afdde6a0bda9b27f93241d8eb649 792 Gene3D G3DSA:3.20.20.60 478 791 2.4E-103 T 28-03-2018 APY29_RS10905 e8a5afdde6a0bda9b27f93241d8eb649 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 344 1.5E-111 T 28-03-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 APY29_RS10905 e8a5afdde6a0bda9b27f93241d8eb649 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 694 712 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 APY29_RS01340 88180957c95f16db39c981f1e23752a1 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 1.3E-6 T 28-03-2018 APY29_RS01340 88180957c95f16db39c981f1e23752a1 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 199 217 1.3E-6 T 28-03-2018 APY29_RS01340 88180957c95f16db39c981f1e23752a1 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 1.3E-6 T 28-03-2018 APY29_RS01340 88180957c95f16db39c981f1e23752a1 463 Pfam PF13454 FAD-NAD(P)-binding 13 164 7.6E-35 T 28-03-2018 APY29_RS01340 88180957c95f16db39c981f1e23752a1 463 Gene3D G3DSA:3.40.50.720 191 400 6.1E-5 T 28-03-2018 APY29_RS01340 88180957c95f16db39c981f1e23752a1 463 Gene3D G3DSA:3.50.50.60 12 190 3.7E-17 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS01340 88180957c95f16db39c981f1e23752a1 463 SUPERFAMILY SSF51905 12 238 2.52E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS04115 2b63ab0a577c9c7761bc6970a35af746 296 Gene3D G3DSA:3.30.1330.60 109 292 4.3E-6 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS04115 2b63ab0a577c9c7761bc6970a35af746 296 SUPERFAMILY SSF103088 215 280 8.24E-7 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS12125 586004208d96c4446f9f9b99d401114f 176 Gene3D G3DSA:3.40.50.2300 1 127 1.9E-18 T 28-03-2018 APY29_RS12125 586004208d96c4446f9f9b99d401114f 176 Pfam PF00072 Response regulator receiver domain 3 109 1.1E-11 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS12125 586004208d96c4446f9f9b99d401114f 176 SMART SM00448 1 112 2.4E-4 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS12125 586004208d96c4446f9f9b99d401114f 176 SUPERFAMILY SSF52172 1 114 4.7E-22 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS14090 ae312bc787abec6d24a70d0abe94def3 430 Pfam PF00113 Enolase, C-terminal TIM barrel domain 142 425 1.1E-132 T 28-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS14090 ae312bc787abec6d24a70d0abe94def3 430 Hamap MF_00318 Enolase [eno]. 2 413 44.154 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS14090 ae312bc787abec6d24a70d0abe94def3 430 SMART SM01192 141 427 3.8E-219 T 28-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS14090 ae312bc787abec6d24a70d0abe94def3 430 Pfam PF03952 Enolase, N-terminal domain 4 134 3.1E-56 T 28-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS14090 ae312bc787abec6d24a70d0abe94def3 430 SUPERFAMILY SSF54826 4 136 1.04E-53 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS14090 ae312bc787abec6d24a70d0abe94def3 430 SMART SM01193 4 134 2.1E-89 T 28-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS14090 ae312bc787abec6d24a70d0abe94def3 430 PIRSF PIRSF001400 1 427 2.0E-185 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS14090 ae312bc787abec6d24a70d0abe94def3 430 SUPERFAMILY SSF51604 142 426 5.37E-127 T 28-03-2018 IPR029065 Enolase C-terminal domain-like APY29_RS14090 ae312bc787abec6d24a70d0abe94def3 430 Gene3D G3DSA:3.20.20.120 128 430 6.9E-102 T 28-03-2018 IPR029065 Enolase C-terminal domain-like APY29_RS14090 ae312bc787abec6d24a70d0abe94def3 430 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 2.9E-201 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS14090 ae312bc787abec6d24a70d0abe94def3 430 ProSitePatterns PS00164 Enolase signature. 336 349 - T 28-03-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS14090 ae312bc787abec6d24a70d0abe94def3 430 PRINTS PR00148 Enolase signature 365 382 2.9E-45 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS14090 ae312bc787abec6d24a70d0abe94def3 430 PRINTS PR00148 Enolase signature 37 51 2.9E-45 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS14090 ae312bc787abec6d24a70d0abe94def3 430 PRINTS PR00148 Enolase signature 107 123 2.9E-45 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS14090 ae312bc787abec6d24a70d0abe94def3 430 PRINTS PR00148 Enolase signature 313 324 2.9E-45 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS14090 ae312bc787abec6d24a70d0abe94def3 430 PRINTS PR00148 Enolase signature 336 350 2.9E-45 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS14090 ae312bc787abec6d24a70d0abe94def3 430 PRINTS PR00148 Enolase signature 163 176 2.9E-45 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS14090 ae312bc787abec6d24a70d0abe94def3 430 Gene3D G3DSA:3.30.390.10 3 127 3.6E-50 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS18605 0e40bf3f16a50105f587a6522f32b4be 465 SUPERFAMILY SSF54534 290 392 1.83E-26 T 28-03-2018 APY29_RS18605 0e40bf3f16a50105f587a6522f32b4be 465 Pfam PF13616 PPIC-type PPIASE domain 284 387 5.4E-26 T 28-03-2018 APY29_RS18605 0e40bf3f16a50105f587a6522f32b4be 465 Pfam PF00639 PPIC-type PPIASE domain 181 275 2.2E-15 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 APY29_RS18605 0e40bf3f16a50105f587a6522f32b4be 465 Hamap MF_01183 Chaperone SurA [surA]. 9 436 31.916 T 28-03-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 APY29_RS18605 0e40bf3f16a50105f587a6522f32b4be 465 SUPERFAMILY SSF54534 176 281 3.4E-25 T 28-03-2018 APY29_RS18605 0e40bf3f16a50105f587a6522f32b4be 465 Gene3D G3DSA:1.10.4030.10 27 154 1.2E-22 T 28-03-2018 APY29_RS18605 0e40bf3f16a50105f587a6522f32b4be 465 Pfam PF09312 SurA N-terminal domain 31 148 1.6E-45 T 28-03-2018 IPR015391 SurA N-terminal APY29_RS18605 0e40bf3f16a50105f587a6522f32b4be 465 SUPERFAMILY SSF109998 31 203 5.81E-41 T 28-03-2018 IPR027304 Trigger factor/SurA domain APY29_RS18605 0e40bf3f16a50105f587a6522f32b4be 465 Gene3D G3DSA:3.10.50.40 166 284 5.9E-21 T 28-03-2018 APY29_RS18605 0e40bf3f16a50105f587a6522f32b4be 465 Gene3D G3DSA:3.10.50.40 285 415 3.0E-30 T 28-03-2018 APY29_RS07350 f6901b6b663bc1092438a01ce7314b76 222 Pfam PF00551 Formyl transferase 9 184 6.9E-52 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APY29_RS07350 f6901b6b663bc1092438a01ce7314b76 222 SUPERFAMILY SSF53328 8 202 7.85E-58 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APY29_RS07350 f6901b6b663bc1092438a01ce7314b76 222 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 9 192 28.344 T 28-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 APY29_RS07350 f6901b6b663bc1092438a01ce7314b76 222 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 9 195 5.4E-64 T 28-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 APY29_RS07350 f6901b6b663bc1092438a01ce7314b76 222 Gene3D G3DSA:3.40.50.170 2 200 2.1E-64 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APY29_RS08450 0503ec34cbd9678fa59ff3704f48720c 671 Pfam PF01431 Peptidase family M13 473 663 6.8E-42 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS08450 0503ec34cbd9678fa59ff3704f48720c 671 Gene3D G3DSA:3.40.390.10 341 671 1.6E-64 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APY29_RS08450 0503ec34cbd9678fa59ff3704f48720c 671 Gene3D G3DSA:3.40.390.10 40 304 5.4E-7 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APY29_RS08450 0503ec34cbd9678fa59ff3704f48720c 671 SUPERFAMILY SSF55486 43 670 1.32E-138 T 28-03-2018 APY29_RS08450 0503ec34cbd9678fa59ff3704f48720c 671 Pfam PF05649 Peptidase family M13 44 418 4.2E-67 T 28-03-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 APY29_RS08450 0503ec34cbd9678fa59ff3704f48720c 671 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 480 492 1.7E-5 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS08450 0503ec34cbd9678fa59ff3704f48720c 671 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 501 517 1.7E-5 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS08450 0503ec34cbd9678fa59ff3704f48720c 671 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 574 585 1.7E-5 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS15595 fe93c23887c683145d4d51235887d050 376 Pfam PF07687 Peptidase dimerisation domain 175 282 9.2E-26 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain APY29_RS15595 fe93c23887c683145d4d51235887d050 376 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 375 50.253 T 28-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 APY29_RS15595 fe93c23887c683145d4d51235887d050 376 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 135 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APY29_RS15595 fe93c23887c683145d4d51235887d050 376 Pfam PF01546 Peptidase family M20/M25/M40 63 371 6.9E-41 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APY29_RS15595 fe93c23887c683145d4d51235887d050 376 SUPERFAMILY SSF55031 179 287 1.94E-28 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain APY29_RS15595 fe93c23887c683145d4d51235887d050 376 Gene3D G3DSA:3.40.630.10 269 375 1.2E-7 T 28-03-2018 APY29_RS15595 fe93c23887c683145d4d51235887d050 376 Gene3D G3DSA:3.40.630.10 1 268 1.2E-62 T 28-03-2018 APY29_RS15595 fe93c23887c683145d4d51235887d050 376 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 5 373 1.6E-166 T 28-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 APY29_RS15595 fe93c23887c683145d4d51235887d050 376 SUPERFAMILY SSF53187 292 373 1.68E-63 T 28-03-2018 APY29_RS15595 fe93c23887c683145d4d51235887d050 376 SUPERFAMILY SSF53187 2 178 1.68E-63 T 28-03-2018 APY29_RS05295 69e5838d63682f1cb54d90a5e68e7143 723 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 46 718 4.6E-225 T 28-03-2018 IPR004811 RelA/SpoT family GO:0015969 APY29_RS05295 69e5838d63682f1cb54d90a5e68e7143 723 SUPERFAMILY SSF55021 651 721 1.07E-7 T 28-03-2018 APY29_RS05295 69e5838d63682f1cb54d90a5e68e7143 723 Gene3D G3DSA:3.30.70.260 645 723 9.4E-12 T 28-03-2018 APY29_RS05295 69e5838d63682f1cb54d90a5e68e7143 723 SUPERFAMILY SSF81301 201 412 5.4E-57 T 28-03-2018 APY29_RS05295 69e5838d63682f1cb54d90a5e68e7143 723 Gene3D G3DSA:3.10.20.30 402 477 1.8E-19 T 28-03-2018 IPR012675 Beta-grasp domain APY29_RS05295 69e5838d63682f1cb54d90a5e68e7143 723 Pfam PF13328 HD domain 46 195 1.6E-51 T 28-03-2018 IPR003607 HD/PDEase domain APY29_RS05295 69e5838d63682f1cb54d90a5e68e7143 723 Pfam PF13291 ACT domain 646 722 7.1E-16 T 28-03-2018 IPR002912 ACT domain APY29_RS05295 69e5838d63682f1cb54d90a5e68e7143 723 Pfam PF04607 Region found in RelA / SpoT proteins 255 363 1.5E-32 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 APY29_RS05295 69e5838d63682f1cb54d90a5e68e7143 723 Pfam PF02824 TGS domain 408 467 3.9E-16 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 APY29_RS05295 69e5838d63682f1cb54d90a5e68e7143 723 SUPERFAMILY SSF109604 26 210 2.32E-71 T 28-03-2018 APY29_RS05295 69e5838d63682f1cb54d90a5e68e7143 723 SMART SM00471 61 173 1.5E-10 T 28-03-2018 IPR003607 HD/PDEase domain APY29_RS05295 69e5838d63682f1cb54d90a5e68e7143 723 Gene3D G3DSA:3.30.460.10 214 345 7.1E-37 T 28-03-2018 APY29_RS05295 69e5838d63682f1cb54d90a5e68e7143 723 SMART SM00954 255 365 1.5E-58 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 APY29_RS05295 69e5838d63682f1cb54d90a5e68e7143 723 SUPERFAMILY SSF81271 395 467 1.24E-18 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APY29_RS00490 05db20c37cab875796fa01b0cca03e8a 802 SMART SM00487 46 250 1.7E-29 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APY29_RS00490 05db20c37cab875796fa01b0cca03e8a 802 Gene3D G3DSA:3.40.50.300 33 248 1.6E-35 T 28-03-2018 APY29_RS00490 05db20c37cab875796fa01b0cca03e8a 802 Gene3D G3DSA:3.40.50.300 265 419 1.4E-24 T 28-03-2018 APY29_RS00490 05db20c37cab875796fa01b0cca03e8a 802 Pfam PF00270 DEAD/DEAH box helicase 52 220 1.0E-26 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APY29_RS00490 05db20c37cab875796fa01b0cca03e8a 802 Pfam PF00271 Helicase conserved C-terminal domain 279 383 5.6E-15 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS00490 05db20c37cab875796fa01b0cca03e8a 802 Pfam PF09369 Domain of unknown function (DUF1998) 648 753 4.1E-11 T 28-03-2018 IPR018973 DEAD/DEAH-box helicase, putative APY29_RS00490 05db20c37cab875796fa01b0cca03e8a 802 SMART SM00490 296 384 6.2E-17 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS00490 05db20c37cab875796fa01b0cca03e8a 802 SUPERFAMILY SSF52540 62 222 8.15E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS00490 05db20c37cab875796fa01b0cca03e8a 802 SUPERFAMILY SSF52540 251 390 8.15E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS14750 289a7d2a32c828a86233da061a9ce12c 176 Hamap MF_00825 3-hydroxyanthranilate 3,4-dioxygenase [nbaC]. 2 168 37.543 T 28-03-2018 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 APY29_RS14750 289a7d2a32c828a86233da061a9ce12c 176 Pfam PF06052 3-hydroxyanthranilic acid dioxygenase 3 150 9.2E-76 T 28-03-2018 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 APY29_RS14750 289a7d2a32c828a86233da061a9ce12c 176 Gene3D G3DSA:2.60.120.10 7 170 2.6E-46 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS14750 289a7d2a32c828a86233da061a9ce12c 176 SUPERFAMILY SSF51182 1 168 5.15E-58 T 28-03-2018 IPR011051 RmlC-like cupin domain APY29_RS14750 289a7d2a32c828a86233da061a9ce12c 176 TIGRFAM TIGR03037 anthran_nbaC: 3-hydroxyanthranilate 3,4-dioxygenase 6 162 8.7E-79 T 28-03-2018 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 APY29_RS17140 3f5c113c5c95036ec150f130b4a1f33d 439 SUPERFAMILY SSF51445 34 376 7.24E-82 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS17140 3f5c113c5c95036ec150f130b4a1f33d 439 Pfam PF17189 Glycosyl hydrolase family 30 beta sandwich domain 375 435 3.5E-14 T 28-03-2018 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 APY29_RS17140 3f5c113c5c95036ec150f130b4a1f33d 439 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 35 372 1.8E-70 T 28-03-2018 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 APY29_RS17140 3f5c113c5c95036ec150f130b4a1f33d 439 Gene3D G3DSA:2.60.40.1180 369 437 8.3E-17 T 28-03-2018 APY29_RS17140 3f5c113c5c95036ec150f130b4a1f33d 439 PRINTS PR00843 Glycosyl hydrolase family 30 signature 153 170 1.3E-15 T 28-03-2018 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 APY29_RS17140 3f5c113c5c95036ec150f130b4a1f33d 439 PRINTS PR00843 Glycosyl hydrolase family 30 signature 59 85 1.3E-15 T 28-03-2018 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 APY29_RS17140 3f5c113c5c95036ec150f130b4a1f33d 439 PRINTS PR00843 Glycosyl hydrolase family 30 signature 222 244 1.3E-15 T 28-03-2018 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 APY29_RS17140 3f5c113c5c95036ec150f130b4a1f33d 439 PRINTS PR00843 Glycosyl hydrolase family 30 signature 23 43 1.3E-15 T 28-03-2018 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 APY29_RS17140 3f5c113c5c95036ec150f130b4a1f33d 439 Gene3D G3DSA:3.20.20.80 31 368 2.2E-93 T 28-03-2018 APY29_RS08345 b489d86f694a9c3637a3e99443f6d977 193 SUPERFAMILY SSF158710 26 170 3.92E-46 T 28-03-2018 IPR023153 PSPTO4464-like domain APY29_RS08345 b489d86f694a9c3637a3e99443f6d977 193 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 3 171 23.357 T 28-03-2018 IPR006839 Ribosome-associated, YjgA APY29_RS08345 b489d86f694a9c3637a3e99443f6d977 193 Gene3D G3DSA:1.10.60.30 25 94 2.6E-20 T 28-03-2018 APY29_RS08345 b489d86f694a9c3637a3e99443f6d977 193 PIRSF PIRSF016183 1 175 2.4E-69 T 28-03-2018 IPR006839 Ribosome-associated, YjgA APY29_RS08345 b489d86f694a9c3637a3e99443f6d977 193 Gene3D G3DSA:1.10.60.30 102 175 1.6E-29 T 28-03-2018 APY29_RS08345 b489d86f694a9c3637a3e99443f6d977 193 Pfam PF04751 Protein of unknown function (DUF615) 14 167 1.9E-49 T 28-03-2018 IPR006839 Ribosome-associated, YjgA APY29_RS08290 60839c785d1946bbf0113bca262b914c 137 SUPERFAMILY SSF81301 21 126 8.99E-39 T 28-03-2018 APY29_RS08290 60839c785d1946bbf0113bca262b914c 137 Pfam PF02410 Ribosomal silencing factor during starvation 26 120 4.7E-28 T 28-03-2018 APY29_RS08290 60839c785d1946bbf0113bca262b914c 137 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 19 121 25.088 T 28-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APY29_RS08290 60839c785d1946bbf0113bca262b914c 137 Gene3D G3DSA:3.30.460.10 18 136 1.4E-37 T 28-03-2018 APY29_RS08290 60839c785d1946bbf0113bca262b914c 137 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 23 120 2.0E-37 T 28-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APY29_RS09155 d55c164340945be8b23dfd3d59557a90 484 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 33 484 3.1E-156 T 28-03-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 APY29_RS09155 d55c164340945be8b23dfd3d59557a90 484 Gene3D G3DSA:3.40.50.720 154 280 1.8E-13 T 28-03-2018 APY29_RS09155 d55c164340945be8b23dfd3d59557a90 484 Pfam PF02397 Bacterial sugar transferase 293 478 9.9E-64 T 28-03-2018 IPR003362 Bacterial sugar transferase APY29_RS09155 d55c164340945be8b23dfd3d59557a90 484 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 32 484 8.4E-147 T 28-03-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase APY29_RS09155 d55c164340945be8b23dfd3d59557a90 484 Pfam PF13727 CoA-binding domain 77 255 3.3E-32 T 28-03-2018 APY29_RS18380 6cc604127a8b562199bb1e02f4f70838 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.0E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS18380 6cc604127a8b562199bb1e02f4f70838 313 SUPERFAMILY SSF46785 1 111 1.59E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS18380 6cc604127a8b562199bb1e02f4f70838 313 SUPERFAMILY SSF53850 88 295 3.18E-46 T 28-03-2018 APY29_RS18380 6cc604127a8b562199bb1e02f4f70838 313 Pfam PF03466 LysR substrate binding domain 87 292 3.7E-50 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS18380 6cc604127a8b562199bb1e02f4f70838 313 Gene3D G3DSA:3.40.190.10 88 175 5.4E-27 T 28-03-2018 APY29_RS18380 6cc604127a8b562199bb1e02f4f70838 313 Gene3D G3DSA:1.10.10.10 1 86 4.2E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS18380 6cc604127a8b562199bb1e02f4f70838 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS18380 6cc604127a8b562199bb1e02f4f70838 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS18380 6cc604127a8b562199bb1e02f4f70838 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS18380 6cc604127a8b562199bb1e02f4f70838 313 Gene3D G3DSA:3.40.190.10 176 266 7.2E-27 T 28-03-2018 APY29_RS16995 fb22a4f821ed3cbcb55eea1779f6c9f2 650 Pfam PF03169 OPT oligopeptide transporter protein 9 605 1.3E-125 T 28-03-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 APY29_RS16995 fb22a4f821ed3cbcb55eea1779f6c9f2 650 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 4 602 2.5E-83 T 28-03-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 APY29_RS16995 fb22a4f821ed3cbcb55eea1779f6c9f2 650 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 10 605 8.3E-176 T 28-03-2018 IPR004814 Oligopeptide transporter OPT APY29_RS16340 8d03c7da5df0f604beb38bbcf89b58ce 252 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 229 1.5E-82 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APY29_RS16340 8d03c7da5df0f604beb38bbcf89b58ce 252 PIRSF PIRSF000386 1 249 4.3E-88 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APY29_RS16340 8d03c7da5df0f604beb38bbcf89b58ce 252 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 223 5.7E-56 T 28-03-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APY29_RS16340 8d03c7da5df0f604beb38bbcf89b58ce 252 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 252 103.355 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APY29_RS16340 8d03c7da5df0f604beb38bbcf89b58ce 252 SUPERFAMILY SSF75217 2 246 1.11E-91 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases APY29_RS16340 8d03c7da5df0f604beb38bbcf89b58ce 252 Gene3D G3DSA:3.40.1280.10 1 166 3.4E-65 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APY29_RS16340 8d03c7da5df0f604beb38bbcf89b58ce 252 Gene3D G3DSA:1.10.1270.20 167 252 1.8E-28 T 28-03-2018 APY29_RS05860 c4f09397f7aa24f7ca753e5c4c8aae69 225 SUPERFAMILY SSF52172 2 174 1.38E-38 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS05860 c4f09397f7aa24f7ca753e5c4c8aae69 225 Gene3D G3DSA:3.40.50.2300 1 122 2.5E-33 T 28-03-2018 APY29_RS05860 c4f09397f7aa24f7ca753e5c4c8aae69 225 SMART SM00448 1 113 2.9E-39 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS05860 c4f09397f7aa24f7ca753e5c4c8aae69 225 Gene3D G3DSA:1.10.10.10 123 225 6.4E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS05860 c4f09397f7aa24f7ca753e5c4c8aae69 225 Pfam PF00072 Response regulator receiver domain 3 112 1.9E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS05860 c4f09397f7aa24f7ca753e5c4c8aae69 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 2.5E-17 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS05860 c4f09397f7aa24f7ca753e5c4c8aae69 225 SMART SM00862 146 220 2.8E-17 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS12680 16e438fc5ef473c7f3a569b1a5249522 221 Pfam PF13861 FlgD Tudor-like domain 84 217 1.6E-14 T 28-03-2018 IPR025963 FlgD Tudor-like domain APY29_RS12680 16e438fc5ef473c7f3a569b1a5249522 221 Pfam PF13860 FlgD Ig-like domain 104 177 4.0E-20 T 28-03-2018 IPR025965 FlgD Ig-like domain APY29_RS12680 16e438fc5ef473c7f3a569b1a5249522 221 Pfam PF03963 Flagellar hook capping protein - N-terminal region 15 75 2.0E-22 T 28-03-2018 IPR005648 Flagellar hook capping protein APY29_RS12680 16e438fc5ef473c7f3a569b1a5249522 221 Gene3D G3DSA:2.60.40.10 71 193 5.3E-5 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS16690 9e38d2914b8e5e213286abf657c6f7ab 340 SUPERFAMILY SSF82114 176 308 1.33E-42 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 APY29_RS16690 9e38d2914b8e5e213286abf657c6f7ab 340 PIRSF PIRSF004491 7 314 8.8E-90 T 28-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 APY29_RS16690 9e38d2914b8e5e213286abf657c6f7ab 340 SUPERFAMILY SSF52374 17 176 2.03E-27 T 28-03-2018 APY29_RS16690 9e38d2914b8e5e213286abf657c6f7ab 340 Pfam PF06574 FAD synthetase 15 168 6.4E-44 T 28-03-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 APY29_RS16690 9e38d2914b8e5e213286abf657c6f7ab 340 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 306 2.9E-74 T 28-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 APY29_RS16690 9e38d2914b8e5e213286abf657c6f7ab 340 SMART SM00904 184 307 1.9E-59 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 APY29_RS16690 9e38d2914b8e5e213286abf657c6f7ab 340 Gene3D G3DSA:3.40.50.620 4 180 4.1E-36 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS16690 9e38d2914b8e5e213286abf657c6f7ab 340 Gene3D G3DSA:2.40.30.30 181 332 3.3E-42 T 28-03-2018 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 APY29_RS16690 9e38d2914b8e5e213286abf657c6f7ab 340 Pfam PF01687 Riboflavin kinase 185 306 1.2E-35 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 APY29_RS17190 4e266e08cc39b34e9ff4f157ff3f559e 1028 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 901 971 7.2E-7 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APY29_RS17190 4e266e08cc39b34e9ff4f157ff3f559e 1028 SUPERFAMILY SSF52540 888 983 2.1E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17190 4e266e08cc39b34e9ff4f157ff3f559e 1028 SUPERFAMILY SSF52540 353 531 2.1E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17190 4e266e08cc39b34e9ff4f157ff3f559e 1028 Gene3D G3DSA:3.20.20.140 11 279 7.6E-9 T 28-03-2018 APY29_RS17190 4e266e08cc39b34e9ff4f157ff3f559e 1028 Gene3D G3DSA:3.40.50.300 629 1007 2.4E-15 T 28-03-2018 APY29_RS17190 4e266e08cc39b34e9ff4f157ff3f559e 1028 Gene3D G3DSA:3.40.50.300 341 628 3.8E-13 T 28-03-2018 APY29_RS17190 4e266e08cc39b34e9ff4f157ff3f559e 1028 SUPERFAMILY SSF89550 13 115 5.1E-5 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 APY29_RS17190 4e266e08cc39b34e9ff4f157ff3f559e 1028 SUPERFAMILY SSF89550 200 318 5.1E-5 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 APY29_RS04265 ccde563fdc547c421f9e3fe00137659b 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 201 214 2.2E-28 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS04265 ccde563fdc547c421f9e3fe00137659b 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 230 245 2.2E-28 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS04265 ccde563fdc547c421f9e3fe00137659b 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 167 186 2.2E-28 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS04265 ccde563fdc547c421f9e3fe00137659b 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 90 104 2.2E-28 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS04265 ccde563fdc547c421f9e3fe00137659b 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 370 446 1.3E-10 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS04265 ccde563fdc547c421f9e3fe00137659b 448 Gene3D G3DSA:3.40.120.10 3 157 3.7E-36 T 28-03-2018 APY29_RS04265 ccde563fdc547c421f9e3fe00137659b 448 Gene3D G3DSA:3.30.310.50 370 448 1.3E-14 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS04265 ccde563fdc547c421f9e3fe00137659b 448 Gene3D G3DSA:3.40.120.10 260 369 1.6E-25 T 28-03-2018 APY29_RS04265 ccde563fdc547c421f9e3fe00137659b 448 Gene3D G3DSA:3.40.120.10 158 259 1.8E-29 T 28-03-2018 APY29_RS04265 ccde563fdc547c421f9e3fe00137659b 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 255 365 4.2E-24 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS04265 ccde563fdc547c421f9e3fe00137659b 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 151 250 1.2E-21 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS04265 ccde563fdc547c421f9e3fe00137659b 448 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 91 100 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS04265 ccde563fdc547c421f9e3fe00137659b 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 131 2.4E-34 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS04265 ccde563fdc547c421f9e3fe00137659b 448 SUPERFAMILY SSF53738 4 174 1.02E-34 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS04265 ccde563fdc547c421f9e3fe00137659b 448 SUPERFAMILY SSF53738 151 253 9.42E-28 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS04265 ccde563fdc547c421f9e3fe00137659b 448 SUPERFAMILY SSF55957 364 447 6.1E-19 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS04265 ccde563fdc547c421f9e3fe00137659b 448 SUPERFAMILY SSF53738 255 359 3.92E-31 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APY29_RS22395 e9a1e64b140444261c5250fc72ec3b68 284 Gene3D G3DSA:2.60.120.10 138 284 2.6E-48 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS22395 e9a1e64b140444261c5250fc72ec3b68 284 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 5 284 53.267 T 28-03-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 APY29_RS22395 e9a1e64b140444261c5250fc72ec3b68 284 Pfam PF04962 KduI/IolB family 72 273 4.0E-35 T 28-03-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 APY29_RS22395 e9a1e64b140444261c5250fc72ec3b68 284 SUPERFAMILY SSF51182 6 268 9.35E-98 T 28-03-2018 IPR011051 RmlC-like cupin domain APY29_RS22395 e9a1e64b140444261c5250fc72ec3b68 284 PIRSF PIRSF006625 5 284 2.1E-129 T 28-03-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 APY29_RS22395 e9a1e64b140444261c5250fc72ec3b68 284 Gene3D G3DSA:2.60.120.520 28 137 4.7E-43 T 28-03-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 APY29_RS04430 d4823f768a5ac12d2ee23ecb3fdec64b 1350 SUPERFAMILY SSF56042 875 1091 8.37E-49 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain APY29_RS04430 d4823f768a5ac12d2ee23ecb3fdec64b 1350 SUPERFAMILY SSF55326 213 415 1.26E-51 T 28-03-2018 IPR016188 PurM-like, N-terminal domain APY29_RS04430 d4823f768a5ac12d2ee23ecb3fdec64b 1350 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1098 1349 9.5E-98 T 28-03-2018 APY29_RS04430 d4823f768a5ac12d2ee23ecb3fdec64b 1350 SUPERFAMILY SSF55326 844 866 2.51E-58 T 28-03-2018 IPR016188 PurM-like, N-terminal domain APY29_RS04430 d4823f768a5ac12d2ee23ecb3fdec64b 1350 SUPERFAMILY SSF55326 646 816 2.51E-58 T 28-03-2018 IPR016188 PurM-like, N-terminal domain APY29_RS04430 d4823f768a5ac12d2ee23ecb3fdec64b 1350 Pfam PF02769 AIR synthase related protein, C-terminal domain 421 578 1.0E-30 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain APY29_RS04430 d4823f768a5ac12d2ee23ecb3fdec64b 1350 Pfam PF02769 AIR synthase related protein, C-terminal domain 880 1024 2.0E-10 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain APY29_RS04430 d4823f768a5ac12d2ee23ecb3fdec64b 1350 Gene3D G3DSA:3.30.1330.10 175 209 9.7E-4 T 28-03-2018 IPR016188 PurM-like, N-terminal domain APY29_RS04430 d4823f768a5ac12d2ee23ecb3fdec64b 1350 Gene3D G3DSA:3.30.1330.10 651 833 6.8E-17 T 28-03-2018 IPR016188 PurM-like, N-terminal domain APY29_RS04430 d4823f768a5ac12d2ee23ecb3fdec64b 1350 Gene3D G3DSA:3.30.1330.10 210 415 1.5E-45 T 28-03-2018 IPR016188 PurM-like, N-terminal domain APY29_RS04430 d4823f768a5ac12d2ee23ecb3fdec64b 1350 SMART SM01211 1098 1349 1.4E-142 T 28-03-2018 APY29_RS04430 d4823f768a5ac12d2ee23ecb3fdec64b 1350 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 817 0.0 T 28-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 APY29_RS04430 d4823f768a5ac12d2ee23ecb3fdec64b 1350 SUPERFAMILY SSF82697 1 148 4.39E-32 T 28-03-2018 APY29_RS04430 d4823f768a5ac12d2ee23ecb3fdec64b 1350 SUPERFAMILY SSF56042 421 585 1.5E-50 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain APY29_RS04430 d4823f768a5ac12d2ee23ecb3fdec64b 1350 SUPERFAMILY SSF56042 620 680 1.5E-50 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain APY29_RS04430 d4823f768a5ac12d2ee23ecb3fdec64b 1350 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1350 20.571 T 28-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 APY29_RS04430 d4823f768a5ac12d2ee23ecb3fdec64b 1350 SUPERFAMILY SSF52317 1095 1349 3.13E-90 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS04430 d4823f768a5ac12d2ee23ecb3fdec64b 1350 Gene3D G3DSA:3.90.650.10 416 601 2.5E-29 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain APY29_RS04430 d4823f768a5ac12d2ee23ecb3fdec64b 1350 Gene3D G3DSA:3.40.50.880 1097 1349 1.6E-29 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS04430 d4823f768a5ac12d2ee23ecb3fdec64b 1350 SUPERFAMILY SSF109736 157 212 5.62E-19 T 28-03-2018 APY29_RS04430 d4823f768a5ac12d2ee23ecb3fdec64b 1350 Gene3D G3DSA:3.90.650.10 840 1043 5.0E-28 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain APY29_RS07725 a84a2ed422463daa0ef11be6b4414a05 285 Pfam PF02678 Pirin 26 126 5.5E-38 T 28-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 APY29_RS07725 a84a2ed422463daa0ef11be6b4414a05 285 Pfam PF05726 Pirin C-terminal cupin domain 181 285 1.0E-29 T 28-03-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 APY29_RS07725 a84a2ed422463daa0ef11be6b4414a05 285 SUPERFAMILY SSF51182 10 285 1.98E-89 T 28-03-2018 IPR011051 RmlC-like cupin domain APY29_RS07725 a84a2ed422463daa0ef11be6b4414a05 285 PIRSF PIRSF006232 7 285 7.2E-98 T 28-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 APY29_RS07725 a84a2ed422463daa0ef11be6b4414a05 285 Gene3D G3DSA:2.60.120.10 5 259 1.9E-84 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS09435 1c4763b2d19def1e02836639213941e7 528 Pfam PF04616 Glycosyl hydrolases family 43 46 332 1.8E-39 T 28-03-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APY29_RS09435 1c4763b2d19def1e02836639213941e7 528 SUPERFAMILY SSF75005 38 341 5.85E-59 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APY29_RS09435 1c4763b2d19def1e02836639213941e7 528 Gene3D G3DSA:2.115.10.20 35 343 2.2E-62 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APY29_RS09435 1c4763b2d19def1e02836639213941e7 528 Gene3D G3DSA:2.60.120.260 349 511 5.2E-25 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS22745 4283744bdde8140dd9b412126e83ade0 977 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 960 977 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site APY29_RS22745 4283744bdde8140dd9b412126e83ade0 977 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 53 977 1.8E-242 T 28-03-2018 IPR010104 Bacterial TonB-dependent receptor APY29_RS22745 4283744bdde8140dd9b412126e83ade0 977 Pfam PF00593 TonB dependent receptor 487 974 9.3E-33 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS22745 4283744bdde8140dd9b412126e83ade0 977 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 182 9.7E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS22745 4283744bdde8140dd9b412126e83ade0 977 Gene3D G3DSA:2.170.130.10 44 192 4.8E-18 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS22745 4283744bdde8140dd9b412126e83ade0 977 Gene3D G3DSA:2.40.170.20 193 977 4.3E-56 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS22745 4283744bdde8140dd9b412126e83ade0 977 SUPERFAMILY SSF56935 344 549 1.95E-76 T 28-03-2018 APY29_RS22745 4283744bdde8140dd9b412126e83ade0 977 SUPERFAMILY SSF56935 811 977 1.95E-76 T 28-03-2018 APY29_RS22745 4283744bdde8140dd9b412126e83ade0 977 SUPERFAMILY SSF56935 605 777 1.95E-76 T 28-03-2018 APY29_RS22745 4283744bdde8140dd9b412126e83ade0 977 SUPERFAMILY SSF56935 48 250 1.95E-76 T 28-03-2018 APY29_RS14640 515202015c153189b4dc3212998a73e1 143 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 2 95 21.161 T 28-03-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 APY29_RS14640 515202015c153189b4dc3212998a73e1 143 Gene3D G3DSA:3.30.70.60 1 101 3.0E-28 T 28-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 APY29_RS14640 515202015c153189b4dc3212998a73e1 143 TIGRFAM TIGR00166 S6: ribosomal protein bS6 3 94 9.7E-32 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS14640 515202015c153189b4dc3212998a73e1 143 SUPERFAMILY SSF54995 1 104 1.44E-34 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS14640 515202015c153189b4dc3212998a73e1 143 Pfam PF01250 Ribosomal protein S6 4 92 5.1E-26 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS11150 5037352bf70fb40a8b448f39cce2fed0 848 SUPERFAMILY SSF56281 538 768 2.36E-42 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS11150 5037352bf70fb40a8b448f39cce2fed0 848 Pfam PF00753 Metallo-beta-lactamase superfamily 545 699 8.6E-12 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS11150 5037352bf70fb40a8b448f39cce2fed0 848 Gene3D G3DSA:3.60.15.10 533 756 5.4E-27 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS11150 5037352bf70fb40a8b448f39cce2fed0 848 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 266 442 4.4E-26 T 28-03-2018 IPR004477 ComEC/Rec2-related protein APY29_RS11150 5037352bf70fb40a8b448f39cce2fed0 848 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 161 762 1.6E-100 T 28-03-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 APY29_RS11150 5037352bf70fb40a8b448f39cce2fed0 848 Pfam PF03772 Competence protein 244 512 6.1E-59 T 28-03-2018 IPR004477 ComEC/Rec2-related protein APY29_RS11150 5037352bf70fb40a8b448f39cce2fed0 848 SMART SM00849 548 733 7.0E-13 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS11150 5037352bf70fb40a8b448f39cce2fed0 848 Pfam PF13567 Domain of unknown function (DUF4131) 22 204 3.2E-22 T 28-03-2018 IPR025405 Domain of unknown function DUF4131 APY29_RS21320 651ec984a2e126bc42256a795c047359 504 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 388 484 1.1E-10 T 28-03-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 APY29_RS21320 651ec984a2e126bc42256a795c047359 504 Gene3D G3DSA:3.30.9.10 83 184 1.2E-19 T 28-03-2018 APY29_RS21320 651ec984a2e126bc42256a795c047359 504 Gene3D G3DSA:3.30.9.10 185 324 3.6E-38 T 28-03-2018 APY29_RS21320 651ec984a2e126bc42256a795c047359 504 Pfam PF01266 FAD dependent oxidoreductase 6 329 6.1E-47 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APY29_RS21320 651ec984a2e126bc42256a795c047359 504 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 354 364 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 APY29_RS21320 651ec984a2e126bc42256a795c047359 504 SUPERFAMILY SSF54373 230 323 7.06E-6 T 28-03-2018 APY29_RS21320 651ec984a2e126bc42256a795c047359 504 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 10 27 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 APY29_RS21320 651ec984a2e126bc42256a795c047359 504 SUPERFAMILY SSF51905 316 376 4.26E-32 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS21320 651ec984a2e126bc42256a795c047359 504 SUPERFAMILY SSF51905 1 264 4.26E-32 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS21320 651ec984a2e126bc42256a795c047359 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 349 361 3.1E-29 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 APY29_RS21320 651ec984a2e126bc42256a795c047359 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 34 46 3.1E-29 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 APY29_RS21320 651ec984a2e126bc42256a795c047359 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 79 91 3.1E-29 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 APY29_RS21320 651ec984a2e126bc42256a795c047359 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 317 323 3.1E-29 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 APY29_RS21320 651ec984a2e126bc42256a795c047359 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 18 28 3.1E-29 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 APY29_RS21320 651ec984a2e126bc42256a795c047359 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 5 17 3.1E-29 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 APY29_RS21320 651ec984a2e126bc42256a795c047359 504 Gene3D G3DSA:3.40.50.720 4 82 0.0013 T 28-03-2018 APY29_RS15710 82522b94a46e4e54cf6f5e8fcfdcc3ea 152 Pfam PF07977 FabA-like domain 19 144 1.6E-39 T 28-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 APY29_RS15710 82522b94a46e4e54cf6f5e8fcfdcc3ea 152 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 10 149 1.9E-60 T 28-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 APY29_RS15710 82522b94a46e4e54cf6f5e8fcfdcc3ea 152 Gene3D G3DSA:3.10.129.10 2 152 1.4E-51 T 28-03-2018 APY29_RS15710 82522b94a46e4e54cf6f5e8fcfdcc3ea 152 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 10 152 34.01 T 28-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 APY29_RS15710 82522b94a46e4e54cf6f5e8fcfdcc3ea 152 SUPERFAMILY SSF54637 13 150 1.26E-44 T 28-03-2018 IPR029069 HotDog domain APY29_RS06085 d075497b03f15357fc7995a26e262443 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 245 5.2E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS06085 d075497b03f15357fc7995a26e262443 264 SUPERFAMILY SSF161098 56 237 4.06E-34 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS06085 d075497b03f15357fc7995a26e262443 264 Gene3D G3DSA:1.10.3720.10 9 252 2.1E-26 T 28-03-2018 APY29_RS19200 99c3c253ff549b16baf1eb56d4d17a6c 324 SUPERFAMILY SSF56042 140 307 8.22E-37 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain APY29_RS19200 99c3c253ff549b16baf1eb56d4d17a6c 324 Gene3D G3DSA:3.30.1330.10 1 138 1.4E-30 T 28-03-2018 IPR016188 PurM-like, N-terminal domain APY29_RS19200 99c3c253ff549b16baf1eb56d4d17a6c 324 SUPERFAMILY SSF55326 3 134 3.49E-31 T 28-03-2018 IPR016188 PurM-like, N-terminal domain APY29_RS19200 99c3c253ff549b16baf1eb56d4d17a6c 324 Gene3D G3DSA:3.90.650.10 142 323 2.1E-41 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain APY29_RS19200 99c3c253ff549b16baf1eb56d4d17a6c 324 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 319 28.801 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 APY29_RS19200 99c3c253ff549b16baf1eb56d4d17a6c 324 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 322 3.8E-104 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 APY29_RS19200 99c3c253ff549b16baf1eb56d4d17a6c 324 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 134 4.7E-22 T 28-03-2018 IPR016188 PurM-like, N-terminal domain APY29_RS19200 99c3c253ff549b16baf1eb56d4d17a6c 324 PIRSF PIRSF005303 1 322 3.2E-82 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 APY29_RS19200 99c3c253ff549b16baf1eb56d4d17a6c 324 Pfam PF02769 AIR synthase related protein, C-terminal domain 147 305 1.2E-11 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain APY29_RS16415 4cb4b3761a61ac26c52b1cde585d9183 274 Pfam PF01739 CheR methyltransferase, SAM binding domain 75 262 5.4E-35 T 28-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal APY29_RS16415 4cb4b3761a61ac26c52b1cde585d9183 274 Gene3D G3DSA:3.40.50.150 73 273 5.9E-33 T 28-03-2018 APY29_RS16415 4cb4b3761a61ac26c52b1cde585d9183 274 SUPERFAMILY SSF53335 75 253 7.6E-38 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS16415 4cb4b3761a61ac26c52b1cde585d9183 274 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 61 5.9E-9 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal APY29_RS16415 4cb4b3761a61ac26c52b1cde585d9183 274 SMART SM00138 8 271 6.2E-28 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APY29_RS16415 4cb4b3761a61ac26c52b1cde585d9183 274 PRINTS PR00996 Glutamate methyltransferase family signature 103 123 1.4E-19 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APY29_RS16415 4cb4b3761a61ac26c52b1cde585d9183 274 PRINTS PR00996 Glutamate methyltransferase family signature 135 151 1.4E-19 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APY29_RS16415 4cb4b3761a61ac26c52b1cde585d9183 274 PRINTS PR00996 Glutamate methyltransferase family signature 228 251 1.4E-19 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APY29_RS16415 4cb4b3761a61ac26c52b1cde585d9183 274 PRINTS PR00996 Glutamate methyltransferase family signature 209 223 1.4E-19 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APY29_RS17315 3bde164f7f8b4cf5fca8d494234373e7 399 Pfam PF04303 PrpF protein 6 392 9.6E-174 T 28-03-2018 IPR007400 PrpF protein APY29_RS17315 3bde164f7f8b4cf5fca8d494234373e7 399 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 4 395 3.5E-236 T 28-03-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 APY29_RS17315 3bde164f7f8b4cf5fca8d494234373e7 399 SUPERFAMILY SSF54506 190 393 9.42E-75 T 28-03-2018 APY29_RS17315 3bde164f7f8b4cf5fca8d494234373e7 399 Gene3D G3DSA:3.10.310.10 3 193 1.1E-84 T 28-03-2018 APY29_RS17315 3bde164f7f8b4cf5fca8d494234373e7 399 SUPERFAMILY SSF54506 2 182 2.04E-71 T 28-03-2018 APY29_RS17315 3bde164f7f8b4cf5fca8d494234373e7 399 Gene3D G3DSA:3.10.310.10 194 374 2.1E-70 T 28-03-2018 APY29_RS21390 174ee1fbcf8b6cb46d2a0c201bc60354 181 SUPERFAMILY SSF51161 3 175 2.63E-45 T 28-03-2018 IPR011004 Trimeric LpxA-like APY29_RS21390 174ee1fbcf8b6cb46d2a0c201bc60354 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 9.5E-4 T 28-03-2018 IPR001451 Hexapeptide repeat APY29_RS21390 174ee1fbcf8b6cb46d2a0c201bc60354 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 46 1.3E-5 T 28-03-2018 IPR001451 Hexapeptide repeat APY29_RS21390 174ee1fbcf8b6cb46d2a0c201bc60354 181 Gene3D G3DSA:2.160.10.10 1 179 6.1E-42 T 28-03-2018 APY29_RS12435 5ed8c6a8cfb97555587877fd95bd603e 389 Pfam PF13823 Alcohol dehydrogenase GroES-associated 2 22 5.6E-8 T 28-03-2018 IPR027399 Alcohol dehydrogenase GroES-associated APY29_RS12435 5ed8c6a8cfb97555587877fd95bd603e 389 Gene3D G3DSA:3.40.50.720 187 344 2.1E-26 T 28-03-2018 APY29_RS12435 5ed8c6a8cfb97555587877fd95bd603e 389 SUPERFAMILY SSF51735 162 351 9.44E-61 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS12435 5ed8c6a8cfb97555587877fd95bd603e 389 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 149 3.6E-25 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APY29_RS12435 5ed8c6a8cfb97555587877fd95bd603e 389 Pfam PF00107 Zinc-binding dehydrogenase 196 266 4.8E-14 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APY29_RS12435 5ed8c6a8cfb97555587877fd95bd603e 389 SUPERFAMILY SSF50129 2 188 2.83E-54 T 28-03-2018 IPR011032 GroES-like APY29_RS12435 5ed8c6a8cfb97555587877fd95bd603e 389 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 APY29_RS12435 5ed8c6a8cfb97555587877fd95bd603e 389 Gene3D G3DSA:3.90.180.10 1 186 2.1E-45 T 28-03-2018 APY29_RS16170 729170267c87b07575ed043f2dfb4c1c 601 Hamap MF_00071 Elongation factor 4 [lepA]. 1 601 295.413 T 28-03-2018 IPR006297 Elongation factor 4 GO:0005525 APY29_RS16170 729170267c87b07575ed043f2dfb4c1c 601 SUPERFAMILY SSF54980 404 498 1.63E-23 T 28-03-2018 IPR035647 EF-G domain III/V-like APY29_RS16170 729170267c87b07575ed043f2dfb4c1c 601 Gene3D G3DSA:2.40.30.10 193 292 2.4E-22 T 28-03-2018 APY29_RS16170 729170267c87b07575ed043f2dfb4c1c 601 Gene3D G3DSA:3.30.70.870 293 372 5.7E-29 T 28-03-2018 APY29_RS16170 729170267c87b07575ed043f2dfb4c1c 601 Pfam PF06421 GTP-binding protein LepA C-terminus 492 598 1.6E-51 T 28-03-2018 IPR013842 GTP-binding protein LepA, C-terminal APY29_RS16170 729170267c87b07575ed043f2dfb4c1c 601 Pfam PF03144 Elongation factor Tu domain 2 210 280 1.0E-9 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 APY29_RS16170 729170267c87b07575ed043f2dfb4c1c 601 PRINTS PR00315 GTP-binding elongation factor signature 11 24 3.1E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS16170 729170267c87b07575ed043f2dfb4c1c 601 PRINTS PR00315 GTP-binding elongation factor signature 95 106 3.1E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS16170 729170267c87b07575ed043f2dfb4c1c 601 PRINTS PR00315 GTP-binding elongation factor signature 79 89 3.1E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS16170 729170267c87b07575ed043f2dfb4c1c 601 PRINTS PR00315 GTP-binding elongation factor signature 54 62 3.1E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS16170 729170267c87b07575ed043f2dfb4c1c 601 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.1E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS16170 729170267c87b07575ed043f2dfb4c1c 601 Pfam PF00009 Elongation factor Tu GTP binding domain 8 186 4.7E-52 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS16170 729170267c87b07575ed043f2dfb4c1c 601 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 47 62 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site APY29_RS16170 729170267c87b07575ed043f2dfb4c1c 601 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 177 5.5E-17 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 APY29_RS16170 729170267c87b07575ed043f2dfb4c1c 601 Pfam PF00679 Elongation factor G C-terminus 404 482 1.3E-18 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like APY29_RS16170 729170267c87b07575ed043f2dfb4c1c 601 TIGRFAM TIGR01393 lepA: elongation factor 4 8 600 4.5E-293 T 28-03-2018 IPR006297 Elongation factor 4 GO:0005525 APY29_RS16170 729170267c87b07575ed043f2dfb4c1c 601 Gene3D G3DSA:3.40.50.300 4 190 9.5E-36 T 28-03-2018 APY29_RS16170 729170267c87b07575ed043f2dfb4c1c 601 Gene3D G3DSA:3.30.70.240 394 554 8.4E-25 T 28-03-2018 APY29_RS16170 729170267c87b07575ed043f2dfb4c1c 601 SUPERFAMILY SSF52540 5 228 1.91E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS16170 729170267c87b07575ed043f2dfb4c1c 601 SUPERFAMILY SSF54980 297 375 6.47E-19 T 28-03-2018 IPR035647 EF-G domain III/V-like APY29_RS16170 729170267c87b07575ed043f2dfb4c1c 601 SMART SM00838 403 491 0.0041 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like APY29_RS03440 be362726a4c6d15eb19fe03528f07a4e 126 SMART SM00448 9 117 1.2E-5 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS03440 be362726a4c6d15eb19fe03528f07a4e 126 SUPERFAMILY SSF52172 8 121 1.01E-15 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS03440 be362726a4c6d15eb19fe03528f07a4e 126 Pfam PF00072 Response regulator receiver domain 11 85 1.4E-5 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS03440 be362726a4c6d15eb19fe03528f07a4e 126 Gene3D G3DSA:3.40.50.2300 6 126 8.4E-13 T 28-03-2018 APY29_RS17105 46112d5e30a3383ee38d62b941891388 209 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 88 188 3.0E-14 T 28-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like APY29_RS17105 46112d5e30a3383ee38d62b941891388 209 Gene3D G3DSA:2.60.120.590 12 189 8.1E-33 T 28-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like APY29_RS17105 46112d5e30a3383ee38d62b941891388 209 SUPERFAMILY SSF51197 7 189 1.37E-41 T 28-03-2018 APY29_RS05245 ae205461e4c91424201a4af86fcc10ae 441 Pfam PF00557 Metallopeptidase family M24 167 427 4.6E-42 T 28-03-2018 IPR000994 Peptidase M24 APY29_RS05245 ae205461e4c91424201a4af86fcc10ae 441 SUPERFAMILY SSF55920 161 435 3.66E-54 T 28-03-2018 IPR000994 Peptidase M24 APY29_RS05245 ae205461e4c91424201a4af86fcc10ae 441 Gene3D G3DSA:3.90.230.10 158 439 5.7E-51 T 28-03-2018 APY29_RS05245 ae205461e4c91424201a4af86fcc10ae 441 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 3 440 55.306 T 28-03-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 APY29_RS05245 ae205461e4c91424201a4af86fcc10ae 441 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 332 344 - T 28-03-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site APY29_RS10715 c95e6b9b5d8b63bd2769b604057de84a 306 SUPERFAMILY SSF50129 4 147 5.63E-35 T 28-03-2018 IPR011032 GroES-like APY29_RS10715 c95e6b9b5d8b63bd2769b604057de84a 306 Gene3D G3DSA:3.40.50.720 135 271 5.6E-19 T 28-03-2018 APY29_RS10715 c95e6b9b5d8b63bd2769b604057de84a 306 Pfam PF00107 Zinc-binding dehydrogenase 153 229 5.3E-9 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APY29_RS10715 c95e6b9b5d8b63bd2769b604057de84a 306 SUPERFAMILY SSF51735 114 274 8.57E-26 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS10715 c95e6b9b5d8b63bd2769b604057de84a 306 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 88 8.2E-9 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APY29_RS10715 c95e6b9b5d8b63bd2769b604057de84a 306 SMART SM00829 7 304 1.4E-14 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APY29_RS10715 c95e6b9b5d8b63bd2769b604057de84a 306 Gene3D G3DSA:3.90.180.10 1 134 5.6E-39 T 28-03-2018 APY29_RS05290 4ca06d071ce340142dfa7520fe16995c 99 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 2.8E-20 T 28-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS05290 4ca06d071ce340142dfa7520fe16995c 99 Pfam PF01192 RNA polymerase Rpb6 8 60 7.7E-16 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 APY29_RS05290 4ca06d071ce340142dfa7520fe16995c 99 SMART SM01409 8 62 5.1E-16 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 APY29_RS05290 4ca06d071ce340142dfa7520fe16995c 99 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 63 17.87 T 28-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS05290 4ca06d071ce340142dfa7520fe16995c 99 SUPERFAMILY SSF63562 1 77 1.96E-24 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 APY29_RS05290 4ca06d071ce340142dfa7520fe16995c 99 Gene3D G3DSA:3.90.940.10 1 94 1.0E-26 T 28-03-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 APY29_RS22580 8e0516b068ecd0629672d208daed7756 305 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 22 283 53.985 T 28-03-2018 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 APY29_RS22580 8e0516b068ecd0629672d208daed7756 305 PIRSF PIRSF004976 12 286 7.1E-69 T 28-03-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 APY29_RS22580 8e0516b068ecd0629672d208daed7756 305 Pfam PF01171 PP-loop family 53 217 1.9E-15 T 28-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 APY29_RS22580 8e0516b068ecd0629672d208daed7756 305 SUPERFAMILY SSF52402 40 268 1.8E-52 T 28-03-2018 APY29_RS22580 8e0516b068ecd0629672d208daed7756 305 Gene3D G3DSA:3.40.50.620 20 254 9.5E-38 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS14030 9f5ceec3085c703394171364eca85984 210 PIRSF PIRSF005461 1 210 1.3E-70 T 28-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 APY29_RS14030 9f5ceec3085c703394171364eca85984 210 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 13 206 27.757 T 28-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 APY29_RS14030 9f5ceec3085c703394171364eca85984 210 Gene3D G3DSA:3.40.50.150 2 210 5.4E-55 T 28-03-2018 APY29_RS14030 9f5ceec3085c703394171364eca85984 210 SUPERFAMILY SSF53335 28 204 2.25E-39 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS14030 9f5ceec3085c703394171364eca85984 210 Pfam PF01728 FtsJ-like methyltransferase 30 204 9.6E-50 T 28-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 APY29_RS08300 e5c0fa83146dc36d38672d2eb0529729 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 6.2E-53 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APY29_RS08300 e5c0fa83146dc36d38672d2eb0529729 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 28.084 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APY29_RS08300 e5c0fa83146dc36d38672d2eb0529729 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.9E-48 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APY29_RS08300 e5c0fa83146dc36d38672d2eb0529729 156 Gene3D G3DSA:3.40.1280.10 1 155 2.8E-51 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APY29_RS08300 e5c0fa83146dc36d38672d2eb0529729 156 SUPERFAMILY SSF75217 1 153 1.31E-47 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases APY29_RS08300 e5c0fa83146dc36d38672d2eb0529729 156 PIRSF PIRSF004505 1 155 4.7E-46 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APY29_RS21465 e50c161751bc8ffe90f050f45167089c 292 SUPERFAMILY SSF51735 9 280 2.56E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS21465 e50c161751bc8ffe90f050f45167089c 292 Gene3D G3DSA:3.90.25.10 151 291 5.4E-5 T 28-03-2018 APY29_RS21465 e50c161751bc8ffe90f050f45167089c 292 Gene3D G3DSA:3.40.50.720 1 150 2.6E-18 T 28-03-2018 APY29_RS21465 e50c161751bc8ffe90f050f45167089c 292 Pfam PF05368 NmrA-like family 9 227 2.5E-19 T 28-03-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 APY29_RS21200 f26e75517f8623b59fc419adc02bcf6b 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.5E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS21200 f26e75517f8623b59fc419adc02bcf6b 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.5E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS21200 f26e75517f8623b59fc419adc02bcf6b 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 4.5E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS21200 f26e75517f8623b59fc419adc02bcf6b 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.5E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS21200 f26e75517f8623b59fc419adc02bcf6b 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 4.5E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS21200 f26e75517f8623b59fc419adc02bcf6b 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 4.5E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS21200 f26e75517f8623b59fc419adc02bcf6b 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 254 4.5E-38 T 28-03-2018 APY29_RS21200 f26e75517f8623b59fc419adc02bcf6b 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.9E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS21200 f26e75517f8623b59fc419adc02bcf6b 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.9E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS21200 f26e75517f8623b59fc419adc02bcf6b 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.9E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS21200 f26e75517f8623b59fc419adc02bcf6b 260 SUPERFAMILY SSF51735 7 255 4.74E-60 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS21200 f26e75517f8623b59fc419adc02bcf6b 260 Gene3D G3DSA:3.40.50.720 1 254 9.9E-51 T 28-03-2018 APY29_RS06845 05165e65c71d32c804cbefb677c6a444 202 Gene3D G3DSA:1.10.10.60 2 62 6.4E-18 T 28-03-2018 APY29_RS06845 05165e65c71d32c804cbefb677c6a444 202 SUPERFAMILY SSF46689 21 78 4.99E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS06845 05165e65c71d32c804cbefb677c6a444 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 73 9.1E-15 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS06845 05165e65c71d32c804cbefb677c6a444 202 Gene3D G3DSA:1.10.10.60 63 198 2.5E-11 T 28-03-2018 APY29_RS06845 05165e65c71d32c804cbefb677c6a444 202 SUPERFAMILY SSF48498 93 192 1.09E-6 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APY29_RS06845 05165e65c71d32c804cbefb677c6a444 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 2.0E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS06845 05165e65c71d32c804cbefb677c6a444 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 2.0E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS11390 16a8c4ad73bf0cba6e0cd904e2c204c5 448 Gene3D G3DSA:1.20.1250.20 4 201 1.7E-26 T 28-03-2018 APY29_RS11390 16a8c4ad73bf0cba6e0cd904e2c204c5 448 Pfam PF07690 Major Facilitator Superfamily 17 405 1.5E-36 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS11390 16a8c4ad73bf0cba6e0cd904e2c204c5 448 SUPERFAMILY SSF103473 12 202 3.92E-47 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS11390 16a8c4ad73bf0cba6e0cd904e2c204c5 448 SUPERFAMILY SSF103473 245 445 3.92E-47 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS11390 16a8c4ad73bf0cba6e0cd904e2c204c5 448 Gene3D G3DSA:1.20.1250.20 248 447 1.1E-11 T 28-03-2018 APY29_RS04470 1957e50a1afa0b7b7115cb6e54f3c405 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 17 42 1.2E-10 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 APY29_RS04470 1957e50a1afa0b7b7115cb6e54f3c405 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 53 71 1.2E-10 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 APY29_RS04470 1957e50a1afa0b7b7115cb6e54f3c405 143 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 17 142 1.7E-28 T 28-03-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 APY29_RS04470 1957e50a1afa0b7b7115cb6e54f3c405 143 SUPERFAMILY SSF54523 45 141 7.85E-24 T 28-03-2018 APY29_RS04470 1957e50a1afa0b7b7115cb6e54f3c405 143 Gene3D G3DSA:3.30.700.10 28 142 1.3E-14 T 28-03-2018 APY29_RS04470 1957e50a1afa0b7b7115cb6e54f3c405 143 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS04470 1957e50a1afa0b7b7115cb6e54f3c405 143 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 37 6.2E-4 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS04470 1957e50a1afa0b7b7115cb6e54f3c405 143 Pfam PF08334 Type II secretion system (T2SS), protein G 40 142 1.0E-28 T 28-03-2018 IPR013545 Type II secretion system protein G APY29_RS17955 e5e7b35003aa1da168c7d86cb84eae78 454 Pfam PF00344 SecY translocase 76 421 2.3E-108 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 APY29_RS17955 e5e7b35003aa1da168c7d86cb84eae78 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 4.5E-88 T 28-03-2018 APY29_RS17955 e5e7b35003aa1da168c7d86cb84eae78 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 4.5E-88 T 28-03-2018 APY29_RS17955 e5e7b35003aa1da168c7d86cb84eae78 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 182 205 4.5E-88 T 28-03-2018 APY29_RS17955 e5e7b35003aa1da168c7d86cb84eae78 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 375 393 4.5E-88 T 28-03-2018 APY29_RS17955 e5e7b35003aa1da168c7d86cb84eae78 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 274 293 4.5E-88 T 28-03-2018 APY29_RS17955 e5e7b35003aa1da168c7d86cb84eae78 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 320 342 4.5E-88 T 28-03-2018 APY29_RS17955 e5e7b35003aa1da168c7d86cb84eae78 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 4.5E-88 T 28-03-2018 APY29_RS17955 e5e7b35003aa1da168c7d86cb84eae78 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 156 181 4.5E-88 T 28-03-2018 APY29_RS17955 e5e7b35003aa1da168c7d86cb84eae78 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 407 425 4.5E-88 T 28-03-2018 APY29_RS17955 e5e7b35003aa1da168c7d86cb84eae78 454 PIRSF PIRSF004557 14 446 3.1E-115 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 APY29_RS17955 e5e7b35003aa1da168c7d86cb84eae78 454 ProSitePatterns PS00756 Protein secY signature 2. 175 192 - T 28-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 APY29_RS17955 e5e7b35003aa1da168c7d86cb84eae78 454 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 434 5.6E-124 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 APY29_RS17955 e5e7b35003aa1da168c7d86cb84eae78 454 SUPERFAMILY SSF103491 15 429 8.76E-122 T 28-03-2018 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 APY29_RS17955 e5e7b35003aa1da168c7d86cb84eae78 454 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 438 28.094 T 28-03-2018 IPR026593 Protein translocase subunit SecY APY29_RS17955 e5e7b35003aa1da168c7d86cb84eae78 454 Gene3D G3DSA:1.10.3370.10 13 444 8.1E-151 T 28-03-2018 APY29_RS17955 e5e7b35003aa1da168c7d86cb84eae78 454 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 28-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 APY29_RS20235 bf34f862767db4b07048c6f1e22eff4c 306 SUPERFAMILY SSF55048 124 182 8.63E-9 T 28-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 APY29_RS20235 bf34f862767db4b07048c6f1e22eff4c 306 Gene3D G3DSA:3.40.366.10 168 297 2.1E-23 T 28-03-2018 APY29_RS20235 bf34f862767db4b07048c6f1e22eff4c 306 Gene3D G3DSA:3.40.366.10 1 167 3.1E-25 T 28-03-2018 APY29_RS20235 bf34f862767db4b07048c6f1e22eff4c 306 Pfam PF00698 Acyl transferase domain 6 276 6.8E-21 T 28-03-2018 IPR014043 Acyl transferase APY29_RS20235 bf34f862767db4b07048c6f1e22eff4c 306 TIGRFAM TIGR03131 malonate_mdcH: malonate decarboxylase, epsilon subunit 3 298 1.4E-105 T 28-03-2018 IPR017554 Malonate decarboxylase, McdH subunit APY29_RS20235 bf34f862767db4b07048c6f1e22eff4c 306 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 306 4.9E-16 T 28-03-2018 IPR020801 Polyketide synthase, acyl transferase domain APY29_RS20235 bf34f862767db4b07048c6f1e22eff4c 306 SUPERFAMILY SSF52151 178 299 7.85E-43 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APY29_RS20235 bf34f862767db4b07048c6f1e22eff4c 306 SUPERFAMILY SSF52151 3 116 7.85E-43 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APY29_RS09670 518eaf65cebca18436d87b6ea0ad324b 1669 SUPERFAMILY SSF51735 1007 1109 6.43E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS09670 518eaf65cebca18436d87b6ea0ad324b 1669 SUPERFAMILY SSF51735 1147 1275 6.43E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS09670 518eaf65cebca18436d87b6ea0ad324b 1669 Pfam PF12466 Glutamate dehydrogenase N terminal 1 95 1.3E-43 T 28-03-2018 IPR024727 Bacterial NAD-glutamate dehydrogenase, N-terminal APY29_RS09670 518eaf65cebca18436d87b6ea0ad324b 1669 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 99 1662 0.0 T 28-03-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 APY29_RS09670 518eaf65cebca18436d87b6ea0ad324b 1669 PIRSF PIRSF036761 1 1669 0.0 T 28-03-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 APY29_RS09670 518eaf65cebca18436d87b6ea0ad324b 1669 SUPERFAMILY SSF53223 817 1003 1.53E-20 T 28-03-2018 APY29_RS09670 518eaf65cebca18436d87b6ea0ad324b 1669 Gene3D G3DSA:3.40.50.720 1000 1345 4.4E-55 T 28-03-2018 APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 Gene3D G3DSA:3.30.450.40 100 320 2.2E-24 T 28-03-2018 IPR029016 GAF domain-like APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 SUPERFAMILY SSF55874 422 590 9.69E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 Pfam PF00512 His Kinase A (phospho-acceptor) domain 366 433 4.7E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 SMART SM00448 937 1050 2.7E-37 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 SMART SM00448 791 905 1.6E-14 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 SMART SM00448 669 779 2.0E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 SMART SM00387 480 592 3.6E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 Pfam PF00072 Response regulator receiver domain 939 1048 7.9E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 Pfam PF00072 Response regulator receiver domain 794 903 3.1E-14 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 Pfam PF00072 Response regulator receiver domain 671 779 1.1E-15 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 SUPERFAMILY SSF52172 668 784 7.26E-26 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 Gene3D G3DSA:3.40.50.2300 936 1057 1.9E-40 T 28-03-2018 APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 Gene3D G3DSA:3.40.50.2300 788 935 4.1E-20 T 28-03-2018 APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 Gene3D G3DSA:3.30.565.10 437 599 2.2E-46 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 4.6E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 4.6E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 531 4.6E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 545 4.6E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 Pfam PF13185 GAF domain 132 266 3.2E-11 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 SUPERFAMILY SSF52172 792 913 1.32E-19 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 SUPERFAMILY SSF55781 127 296 8.29E-19 T 28-03-2018 IPR029016 GAF domain-like APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 SUPERFAMILY SSF47384 352 434 4.12E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 SMART SM00388 365 433 1.2E-22 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 Gene3D G3DSA:1.10.287.130 356 429 2.2E-15 T 28-03-2018 APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 SMART SM00065 133 276 6.2E-10 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 SUPERFAMILY SSF52172 935 1055 1.35E-39 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 Gene3D G3DSA:3.40.50.2300 660 787 1.1E-24 T 28-03-2018 APY29_RS16410 89cdde082f418be391590a23b3cd4956 1057 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 481 590 3.5E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS10640 44707ba8892d2804fd34ba3f0a87da8f 322 SUPERFAMILY SSF64153 169 213 7.85E-5 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APY29_RS10640 44707ba8892d2804fd34ba3f0a87da8f 322 Pfam PF00953 Glycosyl transferase family 4 77 210 4.0E-23 T 28-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 APY29_RS06400 13c6f8e41558f2ab0aa0729ea0a26c04 335 Pfam PF08448 PAS fold 19 128 1.4E-15 T 28-03-2018 IPR013656 PAS fold-4 APY29_RS06400 13c6f8e41558f2ab0aa0729ea0a26c04 335 Gene3D G3DSA:3.30.450.20 1 126 4.4E-27 T 28-03-2018 APY29_RS06400 13c6f8e41558f2ab0aa0729ea0a26c04 335 SUPERFAMILY SSF55874 208 326 9.97E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS06400 13c6f8e41558f2ab0aa0729ea0a26c04 335 Gene3D G3DSA:3.30.565.10 202 334 1.4E-10 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS06400 13c6f8e41558f2ab0aa0729ea0a26c04 335 SMART SM00091 12 79 1.8E-7 T 28-03-2018 IPR000014 PAS domain APY29_RS06400 13c6f8e41558f2ab0aa0729ea0a26c04 335 SUPERFAMILY SSF55785 10 125 2.62E-21 T 28-03-2018 IPR000014 PAS domain APY29_RS06400 13c6f8e41558f2ab0aa0729ea0a26c04 335 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 134 2.3E-14 T 28-03-2018 IPR000014 PAS domain APY29_RS06400 13c6f8e41558f2ab0aa0729ea0a26c04 335 Gene3D G3DSA:3.30.450.20 127 201 0.37 T 28-03-2018 APY29_RS06400 13c6f8e41558f2ab0aa0729ea0a26c04 335 Pfam PF07536 HWE histidine kinase 140 221 2.0E-25 T 28-03-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 APY29_RS06400 13c6f8e41558f2ab0aa0729ea0a26c04 335 SMART SM00911 140 222 2.3E-32 T 28-03-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 APY29_RS02405 07c694a5215054a2d745a5faa12bafb2 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 71 4.0E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS02405 07c694a5215054a2d745a5faa12bafb2 215 Gene3D G3DSA:1.10.357.10 7 214 1.2E-23 T 28-03-2018 APY29_RS02405 07c694a5215054a2d745a5faa12bafb2 215 SUPERFAMILY SSF46689 20 79 1.61E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 Gene3D G3DSA:1.20.1640.10 268 491 4.5E-46 T 28-03-2018 APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 SUPERFAMILY SSF82714 712 792 1.09E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 SUPERFAMILY SSF82693 135 181 6.98E-21 T 28-03-2018 APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 SUPERFAMILY SSF82693 268 324 6.98E-21 T 28-03-2018 APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 SUPERFAMILY SSF82714 182 265 2.35E-15 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 Pfam PF00873 AcrB/AcrD/AcrF family 5 1014 8.5E-289 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 Gene3D G3DSA:3.30.70.1430 560 652 1.3E-5 T 28-03-2018 APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 SUPERFAMILY SSF82866 794 1014 6.28E-41 T 28-03-2018 APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 Gene3D G3DSA:1.20.1640.10 804 1028 1.7E-27 T 28-03-2018 APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 Gene3D G3DSA:3.30.2090.10 710 792 1.5E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 8.8E-61 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 8.8E-61 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 8.8E-61 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 8.8E-61 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 8.8E-61 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 8.8E-61 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 8.8E-61 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 8.8E-61 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 SUPERFAMILY SSF82866 290 489 3.27E-46 T 28-03-2018 APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 Gene3D G3DSA:3.30.2090.10 180 267 2.6E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 Gene3D G3DSA:3.30.70.1430 40 142 1.4E-23 T 28-03-2018 APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 SUPERFAMILY SSF82693 40 134 1.17E-21 T 28-03-2018 APY29_RS02860 92a7f188689caeabdffb0b839cc4e16d 1046 SUPERFAMILY SSF82693 557 647 1.78E-5 T 28-03-2018 APY29_RS08875 404b559bcf385b75fb198b16a41bdc9f 192 SUPERFAMILY SSF54719 86 191 8.9E-41 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS08875 404b559bcf385b75fb198b16a41bdc9f 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 7 81 3.7E-20 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS08875 404b559bcf385b75fb198b16a41bdc9f 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 1.0E-36 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS08875 404b559bcf385b75fb198b16a41bdc9f 192 Gene3D G3DSA:1.10.287.990 20 82 2.8E-17 T 28-03-2018 APY29_RS08875 404b559bcf385b75fb198b16a41bdc9f 192 SUPERFAMILY SSF46609 2 83 1.96E-24 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS08875 404b559bcf385b75fb198b16a41bdc9f 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.0E-14 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS08875 404b559bcf385b75fb198b16a41bdc9f 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.0E-14 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS08875 404b559bcf385b75fb198b16a41bdc9f 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 1.0E-14 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS08875 404b559bcf385b75fb198b16a41bdc9f 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.0E-14 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS08875 404b559bcf385b75fb198b16a41bdc9f 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.0E-14 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS08875 404b559bcf385b75fb198b16a41bdc9f 192 PIRSF PIRSF000349 1 192 1.5E-72 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS08875 404b559bcf385b75fb198b16a41bdc9f 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 28-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS14020 a669214c70e2b59eadb1068e0d86a3f9 300 Pfam PF00809 Pterin binding enzyme 23 263 4.9E-82 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 APY29_RS14020 a669214c70e2b59eadb1068e0d86a3f9 300 SUPERFAMILY SSF51717 14 280 1.01E-98 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 APY29_RS14020 a669214c70e2b59eadb1068e0d86a3f9 300 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 21 278 3.0E-99 T 28-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 APY29_RS14020 a669214c70e2b59eadb1068e0d86a3f9 300 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 22 37 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 APY29_RS14020 a669214c70e2b59eadb1068e0d86a3f9 300 Gene3D G3DSA:3.20.20.20 19 158 5.1E-58 T 28-03-2018 APY29_RS14020 a669214c70e2b59eadb1068e0d86a3f9 300 Gene3D G3DSA:3.20.20.20 159 281 4.5E-47 T 28-03-2018 APY29_RS14020 a669214c70e2b59eadb1068e0d86a3f9 300 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 56 69 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 APY29_RS17005 5068e12fa28b3f491049dd45cdf0930e 530 SUPERFAMILY SSF53474 271 525 1.08E-66 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS17005 5068e12fa28b3f491049dd45cdf0930e 530 Gene3D G3DSA:2.140.10.30 13 265 1.7E-7 T 28-03-2018 APY29_RS17005 5068e12fa28b3f491049dd45cdf0930e 530 Pfam PF00326 Prolyl oligopeptidase family 316 525 4.6E-46 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APY29_RS17005 5068e12fa28b3f491049dd45cdf0930e 530 Gene3D G3DSA:3.40.50.1820 266 530 1.1E-48 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS08430 d54474260132797137ca09af32cf808d 416 Gene3D G3DSA:3.30.9.10 144 229 1.7E-4 T 28-03-2018 APY29_RS08430 d54474260132797137ca09af32cf808d 416 Gene3D G3DSA:3.30.9.10 230 357 3.7E-28 T 28-03-2018 APY29_RS08430 d54474260132797137ca09af32cf808d 416 SUPERFAMILY SSF51905 111 270 7.12E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS08430 d54474260132797137ca09af32cf808d 416 SUPERFAMILY SSF51905 358 415 7.12E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS08430 d54474260132797137ca09af32cf808d 416 SUPERFAMILY SSF51905 7 58 7.12E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS08430 d54474260132797137ca09af32cf808d 416 SUPERFAMILY SSF54373 270 357 1.44E-14 T 28-03-2018 APY29_RS08430 d54474260132797137ca09af32cf808d 416 Gene3D G3DSA:3.50.50.60 6 143 1.9E-12 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS08430 d54474260132797137ca09af32cf808d 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 3.4E-5 T 28-03-2018 APY29_RS08430 d54474260132797137ca09af32cf808d 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 410 416 3.4E-5 T 28-03-2018 APY29_RS08430 d54474260132797137ca09af32cf808d 416 Pfam PF01266 FAD dependent oxidoreductase 7 397 2.6E-65 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APY29_RS10035 2fcd8fd726e4b5e6bd5fb92874f4baa8 445 Pfam PF02601 Exonuclease VII, large subunit 125 438 9.6E-93 T 28-03-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 APY29_RS10035 2fcd8fd726e4b5e6bd5fb92874f4baa8 445 Gene3D G3DSA:2.40.50.140 19 112 4.9E-6 T 28-03-2018 APY29_RS10035 2fcd8fd726e4b5e6bd5fb92874f4baa8 445 Pfam PF13742 OB-fold nucleic acid binding domain 12 102 4.0E-27 T 28-03-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 APY29_RS10035 2fcd8fd726e4b5e6bd5fb92874f4baa8 445 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 12 356 1.6E-127 T 28-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 APY29_RS10035 2fcd8fd726e4b5e6bd5fb92874f4baa8 445 Gene3D G3DSA:3.90.226.10 175 239 3.3E-4 T 28-03-2018 APY29_RS10035 2fcd8fd726e4b5e6bd5fb92874f4baa8 445 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 6 441 30.5 T 28-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 APY29_RS17545 6f9dd0ff1d33675ba12139896353228f 244 SUPERFAMILY SSF53098 1 176 1.36E-49 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS17545 6f9dd0ff1d33675ba12139896353228f 244 Gene3D G3DSA:3.30.420.10 2 180 8.2E-36 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS17545 6f9dd0ff1d33675ba12139896353228f 244 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 234 2.1E-92 T 28-03-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS17545 6f9dd0ff1d33675ba12139896353228f 244 Pfam PF00929 Exonuclease 4 166 1.9E-31 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III APY29_RS17545 6f9dd0ff1d33675ba12139896353228f 244 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 5 186 5.7E-56 T 28-03-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS17545 6f9dd0ff1d33675ba12139896353228f 244 SMART SM00479 2 175 3.7E-42 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III APY29_RS18685 4c5b9096e588af713340154e8df63b23 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 263 1.4E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS18685 4c5b9096e588af713340154e8df63b23 283 Gene3D G3DSA:1.10.3720.10 25 269 1.3E-25 T 28-03-2018 APY29_RS18685 4c5b9096e588af713340154e8df63b23 283 SUPERFAMILY SSF161098 71 251 2.22E-33 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS21900 9f9d51feff3de82b262d0a3f868abe8f 402 Pfam PF00881 Nitroreductase family 181 370 3.1E-28 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 APY29_RS21900 9f9d51feff3de82b262d0a3f868abe8f 402 SUPERFAMILY SSF55469 176 241 8.08E-23 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 APY29_RS21900 9f9d51feff3de82b262d0a3f868abe8f 402 SUPERFAMILY SSF55469 281 387 8.08E-23 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 APY29_RS21900 9f9d51feff3de82b262d0a3f868abe8f 402 TIGRFAM TIGR04511 SagB_rel_DH_2: putative peptide maturation dehydrogenase 3 382 1.1E-174 T 28-03-2018 IPR030965 Putative peptide maturation dehydrogenase APY29_RS21900 9f9d51feff3de82b262d0a3f868abe8f 402 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 200 369 1.1E-36 T 28-03-2018 IPR020051 SagB-type dehydrogenase domain APY29_RS21900 9f9d51feff3de82b262d0a3f868abe8f 402 Gene3D G3DSA:3.40.109.10 86 372 8.4E-36 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 APY29_RS13755 b5df75c5264a718704a30c037fec70e7 455 Pfam PF01743 Poly A polymerase head domain 56 182 1.6E-34 T 28-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 APY29_RS13755 b5df75c5264a718704a30c037fec70e7 455 SUPERFAMILY SSF81301 27 180 7.74E-39 T 28-03-2018 APY29_RS13755 b5df75c5264a718704a30c037fec70e7 455 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 25 451 1.7E-151 T 28-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 APY29_RS13755 b5df75c5264a718704a30c037fec70e7 455 Gene3D G3DSA:3.30.460.10 22 180 8.4E-49 T 28-03-2018 APY29_RS13755 b5df75c5264a718704a30c037fec70e7 455 SUPERFAMILY SSF81891 183 416 1.57E-44 T 28-03-2018 APY29_RS13755 b5df75c5264a718704a30c037fec70e7 455 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 210 272 5.7E-19 T 28-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 APY29_RS13755 b5df75c5264a718704a30c037fec70e7 455 Pfam PF12626 Polymerase A arginine-rich C-terminus 326 448 2.5E-33 T 28-03-2018 IPR025866 Polymerase A arginine-rich C-terminal domain APY29_RS13755 b5df75c5264a718704a30c037fec70e7 455 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 12 448 37.992 T 28-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 APY29_RS13755 b5df75c5264a718704a30c037fec70e7 455 Gene3D G3DSA:1.10.3090.10 182 435 1.9E-36 T 28-03-2018 APY29_RS13670 a414bba5d03041942249f4425ffa68db 409 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 349 9.1E-6 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS13670 a414bba5d03041942249f4425ffa68db 409 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 382 9.1E-6 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS13670 a414bba5d03041942249f4425ffa68db 409 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 401 9.1E-6 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS13670 a414bba5d03041942249f4425ffa68db 409 Gene3D G3DSA:3.30.565.10 258 405 1.2E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS13670 a414bba5d03041942249f4425ffa68db 409 SUPERFAMILY SSF55874 273 402 2.36E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS13670 a414bba5d03041942249f4425ffa68db 409 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 300 403 3.3E-10 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS13670 a414bba5d03041942249f4425ffa68db 409 SUPERFAMILY SSF47384 198 242 1.08E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS13670 a414bba5d03041942249f4425ffa68db 409 Gene3D G3DSA:1.10.287.130 176 256 3.8E-7 T 28-03-2018 APY29_RS13670 a414bba5d03041942249f4425ffa68db 409 SMART SM00387 296 404 7.7E-12 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS18985 59302cfebec3314c59dec517b9ae329e 275 SUPERFAMILY SSF51730 3 274 3.14E-91 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like APY29_RS18985 59302cfebec3314c59dec517b9ae329e 275 Pfam PF02219 Methylenetetrahydrofolate reductase 3 274 1.0E-86 T 28-03-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 APY29_RS18985 59302cfebec3314c59dec517b9ae329e 275 Gene3D G3DSA:3.20.20.220 2 275 3.5E-93 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like APY29_RS18985 59302cfebec3314c59dec517b9ae329e 275 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 4 273 3.5E-102 T 28-03-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 APY29_RS15150 8499bfc38266fecb134a11d7f16e8bb3 299 Gene3D G3DSA:3.40.190.10 93 183 2.9E-25 T 28-03-2018 APY29_RS15150 8499bfc38266fecb134a11d7f16e8bb3 299 Pfam PF03466 LysR substrate binding domain 93 298 3.0E-42 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS15150 8499bfc38266fecb134a11d7f16e8bb3 299 Gene3D G3DSA:3.40.190.10 184 272 3.9E-17 T 28-03-2018 APY29_RS15150 8499bfc38266fecb134a11d7f16e8bb3 299 SUPERFAMILY SSF46785 4 115 3.9E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS15150 8499bfc38266fecb134a11d7f16e8bb3 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.1E-23 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS15150 8499bfc38266fecb134a11d7f16e8bb3 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.4E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS15150 8499bfc38266fecb134a11d7f16e8bb3 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.4E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS15150 8499bfc38266fecb134a11d7f16e8bb3 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.4E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS15150 8499bfc38266fecb134a11d7f16e8bb3 299 Gene3D G3DSA:1.10.10.10 1 92 4.4E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS15150 8499bfc38266fecb134a11d7f16e8bb3 299 SUPERFAMILY SSF53850 93 299 2.33E-39 T 28-03-2018 APY29_RS05835 0681bef44d8342ec8630721f8c26cafd 130 Pfam PF00816 H-NS histone family 16 108 8.7E-18 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 APY29_RS05835 0681bef44d8342ec8630721f8c26cafd 130 SMART SM00528 75 118 1.3E-8 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 APY29_RS05835 0681bef44d8342ec8630721f8c26cafd 130 SUPERFAMILY SSF81273 80 108 4.32E-6 T 28-03-2018 APY29_RS05835 0681bef44d8342ec8630721f8c26cafd 130 Gene3D G3DSA:4.10.430.10 81 111 5.4E-8 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 APY29_RS20360 f99757edcf08e98284621caf92876f3e 546 SUPERFAMILY SSF48592 406 521 4.66E-79 T 28-03-2018 APY29_RS20360 f99757edcf08e98284621caf92876f3e 546 SUPERFAMILY SSF48592 7 134 4.66E-79 T 28-03-2018 APY29_RS20360 f99757edcf08e98284621caf92876f3e 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 6.8E-97 T 28-03-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 APY29_RS20360 f99757edcf08e98284621caf92876f3e 546 Gene3D G3DSA:3.50.7.10 186 373 7.8E-96 T 28-03-2018 IPR027409 GroEL-like apical domain APY29_RS20360 f99757edcf08e98284621caf92876f3e 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.7E-254 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 APY29_RS20360 f99757edcf08e98284621caf92876f3e 546 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.589 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 APY29_RS20360 f99757edcf08e98284621caf92876f3e 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 28-03-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 APY29_RS20360 f99757edcf08e98284621caf92876f3e 546 Gene3D G3DSA:1.10.560.10 1 185 5.9E-45 T 28-03-2018 IPR027413 GroEL-like equatorial domain APY29_RS20360 f99757edcf08e98284621caf92876f3e 546 SUPERFAMILY SSF54849 137 203 2.52E-24 T 28-03-2018 APY29_RS20360 f99757edcf08e98284621caf92876f3e 546 SUPERFAMILY SSF52029 184 376 4.36E-82 T 28-03-2018 IPR027409 GroEL-like apical domain APY29_RS20360 f99757edcf08e98284621caf92876f3e 546 Gene3D G3DSA:1.10.560.10 374 516 3.5E-25 T 28-03-2018 IPR027413 GroEL-like equatorial domain APY29_RS20360 f99757edcf08e98284621caf92876f3e 546 PRINTS PR00298 60kDa chaperonin signature 398 419 1.6E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 APY29_RS20360 f99757edcf08e98284621caf92876f3e 546 PRINTS PR00298 60kDa chaperonin signature 83 110 1.6E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 APY29_RS20360 f99757edcf08e98284621caf92876f3e 546 PRINTS PR00298 60kDa chaperonin signature 268 291 1.6E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 APY29_RS20360 f99757edcf08e98284621caf92876f3e 546 PRINTS PR00298 60kDa chaperonin signature 27 53 1.6E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 APY29_RS20360 f99757edcf08e98284621caf92876f3e 546 PRINTS PR00298 60kDa chaperonin signature 350 375 1.6E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 APY29_RS08805 ed2ba2829b8bd1348a9b01a88ae1dd00 486 Pfam PF00361 Proton-conducting membrane transporter 130 423 7.0E-75 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08805 ed2ba2829b8bd1348a9b01a88ae1dd00 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 312 324 2.5E-7 T 28-03-2018 APY29_RS08805 ed2ba2829b8bd1348a9b01a88ae1dd00 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 417 436 2.5E-7 T 28-03-2018 APY29_RS08805 ed2ba2829b8bd1348a9b01a88ae1dd00 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 78 103 2.5E-7 T 28-03-2018 APY29_RS08805 ed2ba2829b8bd1348a9b01a88ae1dd00 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 220 241 2.5E-7 T 28-03-2018 APY29_RS08805 ed2ba2829b8bd1348a9b01a88ae1dd00 486 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 15 472 9.2E-139 T 28-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 APY29_RS08805 ed2ba2829b8bd1348a9b01a88ae1dd00 486 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 12 475 17.899 T 28-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 APY29_RS14580 69e8f3188b8fc6d7571cc378e23e67eb 354 SUPERFAMILY SSF100950 12 347 2.01E-114 T 28-03-2018 APY29_RS14580 69e8f3188b8fc6d7571cc378e23e67eb 354 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 17 341 3.0E-136 T 28-03-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 APY29_RS14580 69e8f3188b8fc6d7571cc378e23e67eb 354 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 14 352 38.949 T 28-03-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 APY29_RS14580 69e8f3188b8fc6d7571cc378e23e67eb 354 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 43 341 2.3E-111 T 28-03-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 APY29_RS14580 69e8f3188b8fc6d7571cc378e23e67eb 354 Gene3D G3DSA:1.20.120.420 15 151 1.9E-44 T 28-03-2018 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 APY29_RS14580 69e8f3188b8fc6d7571cc378e23e67eb 354 Gene3D G3DSA:3.40.50.10470 152 352 3.0E-67 T 28-03-2018 APY29_RS14580 69e8f3188b8fc6d7571cc378e23e67eb 354 Pfam PF01008 Initiation factor 2 subunit family 57 341 2.5E-75 T 28-03-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 APY29_RS12665 ba259ae8cba5c39780efb2c4c404387d 314 SMART SM00260 18 157 1.6E-22 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS12665 ba259ae8cba5c39780efb2c4c404387d 314 Gene3D G3DSA:3.40.50.2300 175 313 6.0E-21 T 28-03-2018 APY29_RS12665 ba259ae8cba5c39780efb2c4c404387d 314 SMART SM00448 182 303 1.1E-13 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS12665 ba259ae8cba5c39780efb2c4c404387d 314 Gene3D G3DSA:2.40.50.180 40 109 1.1E-13 T 28-03-2018 APY29_RS12665 ba259ae8cba5c39780efb2c4c404387d 314 Pfam PF00072 Response regulator receiver domain 184 296 8.8E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS12665 ba259ae8cba5c39780efb2c4c404387d 314 Gene3D G3DSA:2.30.30.40 110 151 2.4E-10 T 28-03-2018 APY29_RS12665 ba259ae8cba5c39780efb2c4c404387d 314 SUPERFAMILY SSF50341 18 160 2.49E-32 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS12665 ba259ae8cba5c39780efb2c4c404387d 314 SUPERFAMILY SSF52172 181 308 1.85E-22 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS12665 ba259ae8cba5c39780efb2c4c404387d 314 Pfam PF01584 CheW-like domain 23 159 2.4E-32 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS12665 ba259ae8cba5c39780efb2c4c404387d 314 PIRSF PIRSF002867 2 311 1.6E-98 T 28-03-2018 IPR024181 Chemotaxis response regulator CheV APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 2.4E-35 T 28-03-2018 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 303 325 2.4E-35 T 28-03-2018 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 2.4E-35 T 28-03-2018 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 274 290 2.4E-35 T 28-03-2018 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.4E-35 T 28-03-2018 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 Gene3D G3DSA:3.50.50.60 1 175 2.3E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.6E-72 T 28-03-2018 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 353 374 2.6E-72 T 28-03-2018 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 2.6E-72 T 28-03-2018 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 2.6E-72 T 28-03-2018 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 2.6E-72 T 28-03-2018 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 440 460 2.6E-72 T 28-03-2018 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 318 325 2.6E-72 T 28-03-2018 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 433 2.6E-72 T 28-03-2018 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 289 2.6E-72 T 28-03-2018 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 PIRSF PIRSF000350 1 476 6.9E-74 T 28-03-2018 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 Gene3D G3DSA:3.30.390.30 346 475 3.3E-42 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 338 7.7E-64 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 475 3.8E-151 T 28-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 357 465 1.0E-36 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 SUPERFAMILY SSF55424 354 475 4.47E-42 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 SUPERFAMILY SSF51905 1 347 7.29E-58 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS15130 fb02a1cac287941a4a0e537109cd3172 478 Gene3D G3DSA:3.40.50.720 176 345 7.6E-35 T 28-03-2018 APY29_RS20675 4d477b34015a7317ef2d8d67c9bb744b 217 SUPERFAMILY SSF47240 56 190 1.65E-17 T 28-03-2018 IPR009078 Ferritin-like superfamily APY29_RS20675 4d477b34015a7317ef2d8d67c9bb744b 217 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 57 215 1.3E-39 T 28-03-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 APY29_RS20675 4d477b34015a7317ef2d8d67c9bb744b 217 Gene3D G3DSA:1.20.1260.10 47 193 3.6E-21 T 28-03-2018 IPR012347 Ferritin-related APY29_RS20675 4d477b34015a7317ef2d8d67c9bb744b 217 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 17 217 30.631 T 28-03-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 APY29_RS03775 c03255417d2ccb6c15716a91f81368e5 266 PIRSF PIRSF002854 1 266 8.1E-102 T 28-03-2018 IPR004872 Lipoprotein NlpA family APY29_RS03775 c03255417d2ccb6c15716a91f81368e5 266 Pfam PF03180 NLPA lipoprotein 31 266 1.7E-97 T 28-03-2018 IPR004872 Lipoprotein NlpA family APY29_RS03775 c03255417d2ccb6c15716a91f81368e5 266 Gene3D G3DSA:3.40.190.10 125 266 1.1E-56 T 28-03-2018 APY29_RS03775 c03255417d2ccb6c15716a91f81368e5 266 Gene3D G3DSA:3.40.190.10 27 124 2.8E-21 T 28-03-2018 APY29_RS03775 c03255417d2ccb6c15716a91f81368e5 266 SUPERFAMILY SSF53850 30 266 1.12E-81 T 28-03-2018 APY29_RS12655 0d333a53c83a1f9139560a26bb2e400f 214 Gene3D G3DSA:3.90.1210.10 87 152 2.6E-10 T 28-03-2018 APY29_RS12655 0d333a53c83a1f9139560a26bb2e400f 214 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 77 212 5.7E-41 T 28-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal APY29_RS12655 0d333a53c83a1f9139560a26bb2e400f 214 Pfam PF13144 Chaperone for flagella basal body P-ring formation 44 212 9.7E-42 T 28-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal APY29_RS12655 0d333a53c83a1f9139560a26bb2e400f 214 SMART SM00858 89 151 1.0E-7 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 APY29_RS10250 81acb047fde86d17512c24c902fda23e 281 SUPERFAMILY SSF50494 70 258 2.48E-11 T 28-03-2018 IPR009003 Peptidase S1, PA clan APY29_RS10250 81acb047fde86d17512c24c902fda23e 281 Gene3D G3DSA:2.40.10.10 171 281 6.8E-14 T 28-03-2018 APY29_RS19800 6317788249fe37f577e6bb61817f7052 455 Pfam PF07724 AAA domain (Cdc48 subfamily) 195 341 1.5E-40 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APY29_RS19800 6317788249fe37f577e6bb61817f7052 455 SMART SM00382 54 344 9.3E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS19800 6317788249fe37f577e6bb61817f7052 455 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 9 455 1.2E-204 T 28-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 APY29_RS19800 6317788249fe37f577e6bb61817f7052 455 Gene3D G3DSA:3.40.50.300 6 344 6.5E-48 T 28-03-2018 APY29_RS19800 6317788249fe37f577e6bb61817f7052 455 SMART SM01086 347 446 6.5E-24 T 28-03-2018 IPR019489 Clp ATPase, C-terminal APY29_RS19800 6317788249fe37f577e6bb61817f7052 455 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 58 109 1.2E-6 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APY29_RS19800 6317788249fe37f577e6bb61817f7052 455 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 347 415 3.5E-6 T 28-03-2018 IPR019489 Clp ATPase, C-terminal APY29_RS19800 6317788249fe37f577e6bb61817f7052 455 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 6 455 44.054 T 28-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 APY29_RS19800 6317788249fe37f577e6bb61817f7052 455 SUPERFAMILY SSF52540 9 453 5.4E-90 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS19800 6317788249fe37f577e6bb61817f7052 455 Gene3D G3DSA:1.10.8.60 347 443 2.2E-30 T 28-03-2018 APY29_RS06775 d950ee47fc99d80eacbf0ddaad19807c 266 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 28-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 APY29_RS06775 d950ee47fc99d80eacbf0ddaad19807c 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 86 102 5.6E-7 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 APY29_RS06775 d950ee47fc99d80eacbf0ddaad19807c 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 5.6E-7 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 APY29_RS06775 d950ee47fc99d80eacbf0ddaad19807c 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 5.6E-7 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 APY29_RS06775 d950ee47fc99d80eacbf0ddaad19807c 266 Gene3D G3DSA:3.40.190.80 163 259 2.4E-30 T 28-03-2018 APY29_RS06775 d950ee47fc99d80eacbf0ddaad19807c 266 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 86 99 - T 28-03-2018 IPR020583 Inositol monophosphatase, metal-binding site APY29_RS06775 d950ee47fc99d80eacbf0ddaad19807c 266 Pfam PF00459 Inositol monophosphatase family 8 244 2.2E-48 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 APY29_RS06775 d950ee47fc99d80eacbf0ddaad19807c 266 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 254 4.1E-94 T 28-03-2018 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 APY29_RS06775 d950ee47fc99d80eacbf0ddaad19807c 266 Gene3D G3DSA:3.30.540.10 4 162 2.2E-41 T 28-03-2018 APY29_RS06775 d950ee47fc99d80eacbf0ddaad19807c 266 SUPERFAMILY SSF56655 6 258 4.45E-75 T 28-03-2018 APY29_RS13490 47cee2a64f3d66764b816fe0295d9aa8 375 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 357 4.5E-64 T 28-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 APY29_RS13490 47cee2a64f3d66764b816fe0295d9aa8 375 SUPERFAMILY SSF56784 1 148 3.81E-31 T 28-03-2018 IPR023214 HAD-like domain APY29_RS13490 47cee2a64f3d66764b816fe0295d9aa8 375 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 339 351 - T 28-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 APY29_RS13490 47cee2a64f3d66764b816fe0295d9aa8 375 Gene3D G3DSA:3.40.50.1000 2 155 8.1E-18 T 28-03-2018 IPR023214 HAD-like domain APY29_RS13490 47cee2a64f3d66764b816fe0295d9aa8 375 Gene3D G3DSA:3.30.230.40 169 255 2.9E-34 T 28-03-2018 APY29_RS13490 47cee2a64f3d66764b816fe0295d9aa8 375 Pfam PF13242 HAD-hyrolase-like 102 153 1.1E-4 T 28-03-2018 APY29_RS13490 47cee2a64f3d66764b816fe0295d9aa8 375 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 164 2.0E-69 T 28-03-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 APY29_RS13490 47cee2a64f3d66764b816fe0295d9aa8 375 SUPERFAMILY SSF54211 278 362 6.7E-31 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS13490 47cee2a64f3d66764b816fe0295d9aa8 375 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 143 7.0E-35 T 28-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 APY29_RS13490 47cee2a64f3d66764b816fe0295d9aa8 375 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 28-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 APY29_RS13490 47cee2a64f3d66764b816fe0295d9aa8 375 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 1 375 49.41 T 28-03-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 APY29_RS13490 47cee2a64f3d66764b816fe0295d9aa8 375 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 147 8.6E-21 T 28-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 APY29_RS13490 47cee2a64f3d66764b816fe0295d9aa8 375 Gene3D G3DSA:3.30.230.40 276 375 1.4E-31 T 28-03-2018 APY29_RS13490 47cee2a64f3d66764b816fe0295d9aa8 375 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 375 36.007 T 28-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 APY29_RS13490 47cee2a64f3d66764b816fe0295d9aa8 375 SUPERFAMILY SSF54211 169 253 3.16E-30 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS00395 d5ea42afa0080cf4d93d9f3ec4fd8d63 306 SUPERFAMILY SSF53795 118 247 7.32E-17 T 28-03-2018 APY29_RS00395 d5ea42afa0080cf4d93d9f3ec4fd8d63 306 Gene3D G3DSA:3.40.50.300 116 306 5.5E-29 T 28-03-2018 APY29_RS03860 b0bef523c3d60bd6f9a5be902b3d8d9b 100 Gene3D G3DSA:1.20.20.10 11 86 6.2E-13 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APY29_RS03860 b0bef523c3d60bd6f9a5be902b3d8d9b 100 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 27 84 7.0E-23 T 28-03-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 APY29_RS03860 b0bef523c3d60bd6f9a5be902b3d8d9b 100 Pfam PF00137 ATP synthase subunit C 18 80 3.8E-8 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APY29_RS03860 b0bef523c3d60bd6f9a5be902b3d8d9b 100 SUPERFAMILY SSF81333 12 86 3.27E-17 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APY29_RS03860 b0bef523c3d60bd6f9a5be902b3d8d9b 100 ProSitePatterns PS00605 ATP synthase c subunit signature. 47 68 - T 28-03-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03860 b0bef523c3d60bd6f9a5be902b3d8d9b 100 Hamap MF_01396 ATP synthase subunit c [atpH]. 17 82 13.72 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS14575 f31c6ca5724c32a4e05e7d421cceda42 899 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 875 24.067 T 28-03-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APY29_RS14575 f31c6ca5724c32a4e05e7d421cceda42 899 Gene3D G3DSA:2.120.10.90 532 891 1.6E-124 T 28-03-2018 APY29_RS14575 f31c6ca5724c32a4e05e7d421cceda42 899 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 4.4E-154 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS14575 f31c6ca5724c32a4e05e7d421cceda42 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 1.0E-10 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APY29_RS14575 f31c6ca5724c32a4e05e7d421cceda42 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 1.6E-10 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APY29_RS14575 f31c6ca5724c32a4e05e7d421cceda42 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 579 6.9E-10 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APY29_RS14575 f31c6ca5724c32a4e05e7d421cceda42 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 827 873 1.2E-11 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APY29_RS14575 f31c6ca5724c32a4e05e7d421cceda42 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 6.2E-13 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APY29_RS14575 f31c6ca5724c32a4e05e7d421cceda42 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 777 822 2.1E-16 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APY29_RS14575 f31c6ca5724c32a4e05e7d421cceda42 899 Gene3D G3DSA:3.90.199.10 34 216 9.6E-84 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 APY29_RS14575 f31c6ca5724c32a4e05e7d421cceda42 899 Gene3D G3DSA:3.30.1360.40 236 332 5.8E-37 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 APY29_RS14575 f31c6ca5724c32a4e05e7d421cceda42 899 SUPERFAMILY SSF101904 772 883 1.02E-104 T 28-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal APY29_RS14575 f31c6ca5724c32a4e05e7d421cceda42 899 SUPERFAMILY SSF101904 532 739 1.02E-104 T 28-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal APY29_RS14575 f31c6ca5724c32a4e05e7d421cceda42 899 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 873 0.0 T 28-03-2018 APY29_RS14575 f31c6ca5724c32a4e05e7d421cceda42 899 SMART SM00434 11 498 5.5E-278 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS14575 f31c6ca5724c32a4e05e7d421cceda42 899 Gene3D G3DSA:1.10.268.10 344 520 3.2E-52 T 28-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS14575 f31c6ca5724c32a4e05e7d421cceda42 899 SUPERFAMILY SSF56719 30 520 3.53E-177 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 APY29_RS09940 8ed2f49cd780955b72f5e6bdce254456 552 SUPERFAMILY SSF58104 234 501 5.89E-67 T 28-03-2018 APY29_RS09940 8ed2f49cd780955b72f5e6bdce254456 552 Gene3D G3DSA:1.20.1270.60 72 183 0.074 T 28-03-2018 APY29_RS09940 8ed2f49cd780955b72f5e6bdce254456 552 Pfam PF00672 HAMP domain 214 262 1.2E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS09940 8ed2f49cd780955b72f5e6bdce254456 552 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 183 7.3E-24 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain APY29_RS09940 8ed2f49cd780955b72f5e6bdce254456 552 SMART SM00304 214 266 7.5E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS09940 8ed2f49cd780955b72f5e6bdce254456 552 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 321 467 5.1E-34 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS09940 8ed2f49cd780955b72f5e6bdce254456 552 Gene3D G3DSA:1.10.287.950 212 322 1.5E-16 T 28-03-2018 APY29_RS09940 8ed2f49cd780955b72f5e6bdce254456 552 Gene3D G3DSA:1.10.287.950 323 504 1.5E-47 T 28-03-2018 APY29_RS09940 8ed2f49cd780955b72f5e6bdce254456 552 SMART SM00283 267 500 8.8E-72 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS09940 8ed2f49cd780955b72f5e6bdce254456 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 281 310 2.3E-28 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS09940 8ed2f49cd780955b72f5e6bdce254456 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.3E-28 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS09940 8ed2f49cd780955b72f5e6bdce254456 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 358 385 2.3E-28 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS09940 8ed2f49cd780955b72f5e6bdce254456 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 387 416 2.3E-28 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS00470 23a056c41cdd53cf674f6854a66ea10c 385 Gene3D G3DSA:1.10.10.10 27 84 6.8E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS00470 23a056c41cdd53cf674f6854a66ea10c 385 SUPERFAMILY SSF46785 26 85 2.55E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS00470 23a056c41cdd53cf674f6854a66ea10c 385 SUPERFAMILY SSF53067 94 381 5.47E-26 T 28-03-2018 APY29_RS00470 23a056c41cdd53cf674f6854a66ea10c 385 Pfam PF00480 ROK family 97 260 1.1E-17 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 APY29_RS00470 23a056c41cdd53cf674f6854a66ea10c 385 Gene3D G3DSA:3.30.420.40 85 214 2.3E-19 T 28-03-2018 APY29_RS00470 23a056c41cdd53cf674f6854a66ea10c 385 Gene3D G3DSA:3.30.420.40 215 384 4.3E-22 T 28-03-2018 APY29_RS19990 c97f015940c935dcafc913dc6c05e067 557 SUPERFAMILY SSF48208 45 536 3.47E-157 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 APY29_RS19990 c97f015940c935dcafc913dc6c05e067 557 ProSitePatterns PS00928 Trehalase signature 2. 450 459 - T 28-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 APY29_RS19990 c97f015940c935dcafc913dc6c05e067 557 ProSitePatterns PS00927 Trehalase signature 1. 155 168 - T 28-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 APY29_RS19990 c97f015940c935dcafc913dc6c05e067 557 Pfam PF01204 Trehalase 62 536 5.8E-169 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 APY29_RS19990 c97f015940c935dcafc913dc6c05e067 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 306 323 1.5E-41 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 APY29_RS19990 c97f015940c935dcafc913dc6c05e067 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 272 289 1.5E-41 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 APY29_RS19990 c97f015940c935dcafc913dc6c05e067 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 338 355 1.5E-41 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 APY29_RS19990 c97f015940c935dcafc913dc6c05e067 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 443 459 1.5E-41 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 APY29_RS19990 c97f015940c935dcafc913dc6c05e067 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 197 215 1.5E-41 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 APY29_RS19990 c97f015940c935dcafc913dc6c05e067 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 520 533 1.5E-41 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 APY29_RS19990 c97f015940c935dcafc913dc6c05e067 557 Gene3D G3DSA:1.50.10.10 43 551 1.0E-142 T 28-03-2018 APY29_RS19990 c97f015940c935dcafc913dc6c05e067 557 Hamap MF_01060 Periplasmic trehalase [treA]. 1 538 84.004 T 28-03-2018 IPR023720 Trehalase, periplasmic GO:0004555|GO:0005993|GO:0042597|GO:0071474 KEGG: 00500+3.2.1.28 APY29_RS03865 d4012455ee1eb5ae6916ecec0ea00c3d 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 1.1E-28 T 28-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 APY29_RS03865 d4012455ee1eb5ae6916ecec0ea00c3d 156 SUPERFAMILY SSF81573 62 121 4.32E-12 T 28-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain APY29_RS03865 d4012455ee1eb5ae6916ecec0ea00c3d 156 Gene3D G3DSA:1.20.5.620 62 122 3.1E-11 T 28-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain APY29_RS03865 d4012455ee1eb5ae6916ecec0ea00c3d 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 12.518 T 28-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 APY29_RS03865 d4012455ee1eb5ae6916ecec0ea00c3d 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 1.2E-39 T 28-03-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 APY29_RS20530 078b364b3898f78bfa28ca2f91fa1cc7 205 Pfam PF01066 CDP-alcohol phosphatidyltransferase 28 97 2.6E-10 T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APY29_RS13100 fb0329f5e512cdefc51c7ef43330b621 177 Gene3D G3DSA:1.20.120.30 40 177 2.6E-4 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain APY29_RS02890 6f88b1698190b54e7ac2de8c55913ada 185 Gene3D G3DSA:2.60.120.260 47 184 2.4E-4 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS16090 ad1d8c06b7acd9c9b5a95ef2de08494b 424 Pfam PF01494 FAD binding domain 7 339 4.0E-24 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 APY29_RS16090 ad1d8c06b7acd9c9b5a95ef2de08494b 424 Gene3D G3DSA:3.50.50.60 3 369 8.3E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS16090 ad1d8c06b7acd9c9b5a95ef2de08494b 424 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 8.5E-16 T 28-03-2018 APY29_RS16090 ad1d8c06b7acd9c9b5a95ef2de08494b 424 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 8.5E-16 T 28-03-2018 APY29_RS16090 ad1d8c06b7acd9c9b5a95ef2de08494b 424 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 8.5E-16 T 28-03-2018 APY29_RS16090 ad1d8c06b7acd9c9b5a95ef2de08494b 424 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 147 162 8.5E-16 T 28-03-2018 APY29_RS16090 ad1d8c06b7acd9c9b5a95ef2de08494b 424 SUPERFAMILY SSF51905 6 168 2.95E-50 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS16090 ad1d8c06b7acd9c9b5a95ef2de08494b 424 SUPERFAMILY SSF51905 269 377 2.95E-50 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS19245 5210d8d046c89cb5fd4f192aac687e69 174 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 6.0E-59 T 28-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 APY29_RS19245 5210d8d046c89cb5fd4f192aac687e69 174 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 84.362 T 28-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 APY29_RS19245 5210d8d046c89cb5fd4f192aac687e69 174 Pfam PF03477 ATP cone domain 50 136 4.1E-14 T 28-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 624 6.6E-289 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 337 360 5.2E-98 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 5.2E-98 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 361 386 5.2E-98 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 5.2E-98 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 502 518 5.2E-98 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 447 468 5.2E-98 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 536 558 5.2E-98 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 468 480 5.2E-98 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 5.2E-98 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 310 325 5.2E-98 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 293 309 5.2E-98 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 5.2E-98 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 583 597 5.2E-98 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 5.2E-98 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 Gene3D G3DSA:3.30.565.10 17 216 6.4E-64 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 ProSitePatterns PS00177 DNA topoisomerase II signature. 415 423 - T 28-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 Pfam PF01751 Toprim domain 412 509 1.1E-11 T 28-03-2018 IPR006171 TOPRIM domain APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 SUPERFAMILY SSF54211 217 380 1.27E-42 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 Gene3D G3DSA:3.30.230.10 217 390 3.2E-37 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 170 6.5E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR00418 DNA topoisomerase II family signature 66 79 2.7E-57 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR00418 DNA topoisomerase II family signature 413 427 2.7E-57 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR00418 DNA topoisomerase II family signature 516 528 2.7E-57 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR00418 DNA topoisomerase II family signature 109 123 2.7E-57 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR00418 DNA topoisomerase II family signature 496 513 2.7E-57 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR00418 DNA topoisomerase II family signature 31 46 2.7E-57 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR00418 DNA topoisomerase II family signature 265 278 2.7E-57 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR00418 DNA topoisomerase II family signature 478 494 2.7E-57 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 PRINTS PR00418 DNA topoisomerase II family signature 561 577 2.7E-57 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 SUPERFAMILY SSF56719 387 620 1.7E-74 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 Pfam PF00204 DNA gyrase B 218 383 1.3E-36 T 28-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 627 46.18 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 SUPERFAMILY SSF55874 4 215 9.45E-65 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 Gene3D G3DSA:3.40.50.670 394 626 3.4E-75 T 28-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 SMART SM00387 27 173 1.1E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 SMART SM00433 34 623 1.6E-198 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS14115 51af47348a7e37a1b2ba872c85fd4658 629 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 619 1.7E-23 T 28-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APY29_RS03370 2bcb1b3f54eaa9546786336839f8f250 591 Gene3D G3DSA:3.40.50.300 336 585 5.5E-76 T 28-03-2018 APY29_RS03370 2bcb1b3f54eaa9546786336839f8f250 591 SMART SM00382 370 556 1.9E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS03370 2bcb1b3f54eaa9546786336839f8f250 591 Pfam PF00664 ABC transporter transmembrane region 33 293 4.3E-18 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS03370 2bcb1b3f54eaa9546786336839f8f250 591 Pfam PF00005 ABC transporter 361 510 1.1E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS03370 2bcb1b3f54eaa9546786336839f8f250 591 Gene3D G3DSA:1.20.1560.10 13 335 1.8E-37 T 28-03-2018 APY29_RS03370 2bcb1b3f54eaa9546786336839f8f250 591 SUPERFAMILY SSF90123 16 325 6.8E-48 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS03370 2bcb1b3f54eaa9546786336839f8f250 591 SUPERFAMILY SSF52540 338 580 3.04E-89 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS03370 2bcb1b3f54eaa9546786336839f8f250 591 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS08655 5e7cc70aceba0c9780f70a28db92bc53 257 Gene3D G3DSA:3.30.70.580 1 106 4.8E-28 T 28-03-2018 APY29_RS08655 5e7cc70aceba0c9780f70a28db92bc53 257 SUPERFAMILY SSF55120 1 252 2.01E-80 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS08655 5e7cc70aceba0c9780f70a28db92bc53 257 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 245 30.747 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS08655 5e7cc70aceba0c9780f70a28db92bc53 257 PIRSF PIRSF001430 1 255 5.7E-64 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS08655 5e7cc70aceba0c9780f70a28db92bc53 257 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 4 239 3.4E-58 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS08655 5e7cc70aceba0c9780f70a28db92bc53 257 Pfam PF01416 tRNA pseudouridine synthase 8 104 4.7E-6 T 28-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS08655 5e7cc70aceba0c9780f70a28db92bc53 257 Pfam PF01416 tRNA pseudouridine synthase 144 241 3.7E-25 T 28-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS08655 5e7cc70aceba0c9780f70a28db92bc53 257 Gene3D G3DSA:3.30.70.660 107 241 6.6E-36 T 28-03-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS01460 55d4c609da506125c866b14f1b74900e 356 Pfam PF16344 Domain of unknown function (DUF4974) 249 321 6.4E-7 T 28-03-2018 IPR032508 Protein FecR, C-terminal APY29_RS01460 55d4c609da506125c866b14f1b74900e 356 Pfam PF16220 Domain of unknown function (DUF4880) 13 54 1.0E-7 T 28-03-2018 IPR032623 FecR, N-terminal APY29_RS01460 55d4c609da506125c866b14f1b74900e 356 PIRSF PIRSF018266 3 350 5.7E-68 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APY29_RS01460 55d4c609da506125c866b14f1b74900e 356 Pfam PF04773 FecR protein 140 230 2.1E-15 T 28-03-2018 IPR006860 FecR protein APY29_RS14760 e3a130a0ce34c5339bc5a81899da3a9b 423 SUPERFAMILY SSF53383 7 419 2.72E-74 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS14760 e3a130a0ce34c5339bc5a81899da3a9b 423 TIGRFAM TIGR01814 kynureninase: kynureninase 11 421 6.1E-158 T 28-03-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 APY29_RS14760 e3a130a0ce34c5339bc5a81899da3a9b 423 Gene3D G3DSA:3.90.1150.10 317 423 3.4E-19 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS14760 e3a130a0ce34c5339bc5a81899da3a9b 423 PIRSF PIRSF038800 2 422 7.7E-157 T 28-03-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 APY29_RS14760 e3a130a0ce34c5339bc5a81899da3a9b 423 Pfam PF00266 Aminotransferase class-V 69 361 3.6E-10 T 28-03-2018 IPR000192 Aminotransferase class V domain APY29_RS14760 e3a130a0ce34c5339bc5a81899da3a9b 423 Gene3D G3DSA:3.40.640.10 48 316 1.1E-41 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS14760 e3a130a0ce34c5339bc5a81899da3a9b 423 Hamap MF_01970 Kynureninase [kynU]. 2 421 45.808 T 28-03-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 APY29_RS06585 fa40a1ef00c68d4f100555d912761ccb 120 Gene3D G3DSA:3.40.50.2300 1 120 3.1E-36 T 28-03-2018 APY29_RS06585 fa40a1ef00c68d4f100555d912761ccb 120 Pfam PF00072 Response regulator receiver domain 4 116 3.6E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS06585 fa40a1ef00c68d4f100555d912761ccb 120 SMART SM00448 2 115 1.8E-36 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS06585 fa40a1ef00c68d4f100555d912761ccb 120 SUPERFAMILY SSF52172 1 120 4.7E-37 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS14495 1bec027a4544acca625984b11aa93318 361 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 187 206 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APY29_RS14495 1bec027a4544acca625984b11aa93318 361 Pfam PF00266 Aminotransferase class-V 5 348 1.4E-49 T 28-03-2018 IPR000192 Aminotransferase class V domain APY29_RS14495 1bec027a4544acca625984b11aa93318 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 360 1.2E-148 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 APY29_RS14495 1bec027a4544acca625984b11aa93318 361 SUPERFAMILY SSF53383 1 359 2.24E-106 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS14495 1bec027a4544acca625984b11aa93318 361 Gene3D G3DSA:3.90.1150.10 258 359 4.8E-33 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS14495 1bec027a4544acca625984b11aa93318 361 Gene3D G3DSA:3.40.640.10 16 257 1.5E-28 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS14495 1bec027a4544acca625984b11aa93318 361 PIRSF PIRSF000525 1 361 5.7E-139 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 APY29_RS14495 1bec027a4544acca625984b11aa93318 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 47.937 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 APY29_RS23390 aaa3e4fbd740713c2089e863686d1423 395 Gene3D G3DSA:3.40.50.300 16 295 2.6E-28 T 28-03-2018 APY29_RS23390 aaa3e4fbd740713c2089e863686d1423 395 SUPERFAMILY SSF52540 33 165 2.77E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23390 aaa3e4fbd740713c2089e863686d1423 395 Pfam PF06414 Zeta toxin 25 217 2.4E-57 T 28-03-2018 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 APY29_RS12275 aaa3e4fbd740713c2089e863686d1423 395 Gene3D G3DSA:3.40.50.300 16 295 2.6E-28 T 28-03-2018 APY29_RS12275 aaa3e4fbd740713c2089e863686d1423 395 SUPERFAMILY SSF52540 33 165 2.77E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS12275 aaa3e4fbd740713c2089e863686d1423 395 Pfam PF06414 Zeta toxin 25 217 2.4E-57 T 28-03-2018 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 APY29_RS15755 d2c2ec2799857afd15a8a49019427684 200 Gene3D G3DSA:3.40.50.150 1 193 8.7E-14 T 28-03-2018 APY29_RS15755 d2c2ec2799857afd15a8a49019427684 200 Pfam PF13489 Methyltransferase domain 29 145 8.0E-7 T 28-03-2018 APY29_RS15755 d2c2ec2799857afd15a8a49019427684 200 SUPERFAMILY SSF53335 8 183 3.41E-15 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS03310 de11c7b8be4e39f9725a9af6460bdbab 713 Gene3D G3DSA:2.170.130.10 29 175 1.5E-25 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS03310 de11c7b8be4e39f9725a9af6460bdbab 713 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 68 713 9.7E-103 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APY29_RS03310 de11c7b8be4e39f9725a9af6460bdbab 713 SUPERFAMILY SSF56935 29 713 3.05E-130 T 28-03-2018 APY29_RS03310 de11c7b8be4e39f9725a9af6460bdbab 713 Gene3D G3DSA:2.40.170.20 181 713 2.9E-83 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS03310 de11c7b8be4e39f9725a9af6460bdbab 713 Pfam PF00593 TonB dependent receptor 245 712 1.2E-62 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS03310 de11c7b8be4e39f9725a9af6460bdbab 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 168 8.5E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS01300 03d13ecc61da0d59ac926b058146d839 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 1.6E-23 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS01300 03d13ecc61da0d59ac926b058146d839 55 SUPERFAMILY SSF57829 1 53 2.56E-19 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 APY29_RS01300 03d13ecc61da0d59ac926b058146d839 55 Pfam PF00471 Ribosomal protein L33 8 53 1.5E-17 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS01300 03d13ecc61da0d59ac926b058146d839 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 13.714 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS01300 03d13ecc61da0d59ac926b058146d839 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 28-03-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS17240 0182cf5d970ed514f877d4c21026bba9 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 28-03-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 APY29_RS17240 0182cf5d970ed514f877d4c21026bba9 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 28-03-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 APY29_RS17240 0182cf5d970ed514f877d4c21026bba9 430 Pfam PF00709 Adenylosuccinate synthetase 5 422 4.6E-176 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 APY29_RS17240 0182cf5d970ed514f877d4c21026bba9 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 429 1.3E-176 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 APY29_RS17240 0182cf5d970ed514f877d4c21026bba9 430 Gene3D G3DSA:3.90.170.10 267 430 1.1E-67 T 28-03-2018 APY29_RS17240 0182cf5d970ed514f877d4c21026bba9 430 Gene3D G3DSA:3.40.440.10 1 159 6.3E-56 T 28-03-2018 APY29_RS17240 0182cf5d970ed514f877d4c21026bba9 430 Gene3D G3DSA:3.40.440.10 160 266 1.5E-23 T 28-03-2018 APY29_RS17240 0182cf5d970ed514f877d4c21026bba9 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 209.088 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 APY29_RS17240 0182cf5d970ed514f877d4c21026bba9 430 SMART SM00788 4 424 6.0E-289 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 APY29_RS17240 0182cf5d970ed514f877d4c21026bba9 430 SUPERFAMILY SSF52540 4 429 4.36E-175 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS01530 353c1783ff4dab40eceb42574d7f1a2a 1237 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 196 225 - T 28-03-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 APY29_RS01530 353c1783ff4dab40eceb42574d7f1a2a 1237 Gene3D G3DSA:1.25.40.10 755 951 0.34 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS01530 353c1783ff4dab40eceb42574d7f1a2a 1237 Pfam PF03781 Sulfatase-modifying factor enzyme 1 1065 1234 8.5E-17 T 28-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 APY29_RS01530 353c1783ff4dab40eceb42574d7f1a2a 1237 SUPERFAMILY SSF56112 187 461 2.29E-56 T 28-03-2018 IPR011009 Protein kinase-like domain APY29_RS01530 353c1783ff4dab40eceb42574d7f1a2a 1237 SUPERFAMILY SSF56436 1065 1236 4.24E-27 T 28-03-2018 IPR016187 C-type lectin fold APY29_RS01530 353c1783ff4dab40eceb42574d7f1a2a 1237 Gene3D G3DSA:1.10.510.10 264 754 1.9E-40 T 28-03-2018 APY29_RS01530 353c1783ff4dab40eceb42574d7f1a2a 1237 Gene3D G3DSA:3.30.200.20 180 263 2.4E-16 T 28-03-2018 APY29_RS01530 353c1783ff4dab40eceb42574d7f1a2a 1237 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 317 329 - T 28-03-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 APY29_RS01530 353c1783ff4dab40eceb42574d7f1a2a 1237 Pfam PF00069 Protein kinase domain 190 408 1.9E-35 T 28-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 APY29_RS01530 353c1783ff4dab40eceb42574d7f1a2a 1237 Gene3D G3DSA:3.90.1580.10 1066 1231 5.8E-20 T 28-03-2018 APY29_RS05090 89d937025be02664053dc96282dbf3ad 198 SMART SM00464 12 197 1.1E-4 T 28-03-2018 IPR003111 Lon, substrate-binding domain APY29_RS05090 89d937025be02664053dc96282dbf3ad 198 SUPERFAMILY SSF88697 12 197 3.73E-43 T 28-03-2018 IPR015947 PUA-like domain APY29_RS05090 89d937025be02664053dc96282dbf3ad 198 Gene3D G3DSA:1.10.4060.10 121 198 5.8E-7 T 28-03-2018 APY29_RS05090 89d937025be02664053dc96282dbf3ad 198 Gene3D G3DSA:2.30.130.40 10 120 1.1E-22 T 28-03-2018 APY29_RS05090 89d937025be02664053dc96282dbf3ad 198 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 12 197 7.0E-15 T 28-03-2018 IPR003111 Lon, substrate-binding domain APY29_RS17130 0bab3115fbfe2a40776df7d2f1c65aee 300 SUPERFAMILY SSF51735 54 298 1.66E-79 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS17130 0bab3115fbfe2a40776df7d2f1c65aee 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 224 3.3E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17130 0bab3115fbfe2a40776df7d2f1c65aee 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 144 3.3E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17130 0bab3115fbfe2a40776df7d2f1c65aee 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 261 281 3.3E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17130 0bab3115fbfe2a40776df7d2f1c65aee 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 195 3.3E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17130 0bab3115fbfe2a40776df7d2f1c65aee 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 243 3.3E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17130 0bab3115fbfe2a40776df7d2f1c65aee 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 57 74 3.3E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17130 0bab3115fbfe2a40776df7d2f1c65aee 300 Gene3D G3DSA:3.40.50.720 7 300 2.3E-79 T 28-03-2018 APY29_RS17130 0bab3115fbfe2a40776df7d2f1c65aee 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 205 224 1.9E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17130 0bab3115fbfe2a40776df7d2f1c65aee 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 185 193 1.9E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17130 0bab3115fbfe2a40776df7d2f1c65aee 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 144 1.9E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17130 0bab3115fbfe2a40776df7d2f1c65aee 300 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 192 220 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APY29_RS17130 0bab3115fbfe2a40776df7d2f1c65aee 300 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 62 297 2.3E-60 T 28-03-2018 APY29_RS10635 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 Gene3D G3DSA:1.25.40.10 93 178 3.3E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS10635 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 Pfam PF13432 Tetratricopeptide repeat 116 169 0.0014 T 28-03-2018 APY29_RS10635 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 Pfam PF13432 Tetratricopeptide repeat 190 251 0.0013 T 28-03-2018 APY29_RS10635 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 Gene3D G3DSA:1.25.40.10 238 304 2.6E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS10635 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 Gene3D G3DSA:1.25.40.10 29 92 6.3E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS10635 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 SUPERFAMILY SSF81901 44 276 2.48E-18 T 28-03-2018 APY29_RS10635 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 9 390 35.069 T 28-03-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 APY29_RS10635 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 Gene3D G3DSA:1.25.40.10 185 237 8.0E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS10635 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 SMART SM00028 40 73 56.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS10635 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 SMART SM00028 112 145 45.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS10635 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 SMART SM00028 185 218 150.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS10635 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 SMART SM00028 219 252 130.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS18315 68198a83b687576f7fd8007ac964b261 365 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 7 139 9.1E-37 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal APY29_RS18315 68198a83b687576f7fd8007ac964b261 365 Gene3D G3DSA:3.40.50.720 199 359 2.0E-33 T 28-03-2018 APY29_RS18315 68198a83b687576f7fd8007ac964b261 365 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 28-03-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 Reactome: R-HSA-71403 APY29_RS18315 68198a83b687576f7fd8007ac964b261 365 SMART SM01003 6 139 2.2E-55 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal APY29_RS18315 68198a83b687576f7fd8007ac964b261 365 SMART SM01002 148 310 2.1E-77 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain APY29_RS18315 68198a83b687576f7fd8007ac964b261 365 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 143 354 5.9E-62 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain APY29_RS18315 68198a83b687576f7fd8007ac964b261 365 SUPERFAMILY SSF51735 139 314 3.01E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS18315 68198a83b687576f7fd8007ac964b261 365 Gene3D G3DSA:3.40.50.720 3 194 5.4E-41 T 28-03-2018 APY29_RS18315 68198a83b687576f7fd8007ac964b261 365 SUPERFAMILY SSF52283 5 170 2.47E-44 T 28-03-2018 APY29_RS04640 24894fe9c7e1412edc6e4a3af6c00d6b 171 Pfam PF01327 Polypeptide deformylase 3 157 4.5E-43 T 28-03-2018 IPR023635 Peptide deformylase APY29_RS04640 24894fe9c7e1412edc6e4a3af6c00d6b 171 Hamap MF_00163 Peptide deformylase [def]. 1 169 24.657 T 28-03-2018 IPR023635 Peptide deformylase APY29_RS04640 24894fe9c7e1412edc6e4a3af6c00d6b 171 SUPERFAMILY SSF56420 1 163 5.63E-52 T 28-03-2018 IPR023635 Peptide deformylase APY29_RS04640 24894fe9c7e1412edc6e4a3af6c00d6b 171 PRINTS PR01576 Peptide deformylase signature 33 62 1.8E-27 T 28-03-2018 IPR023635 Peptide deformylase APY29_RS04640 24894fe9c7e1412edc6e4a3af6c00d6b 171 PRINTS PR01576 Peptide deformylase signature 109 127 1.8E-27 T 28-03-2018 IPR023635 Peptide deformylase APY29_RS04640 24894fe9c7e1412edc6e4a3af6c00d6b 171 PRINTS PR01576 Peptide deformylase signature 97 108 1.8E-27 T 28-03-2018 IPR023635 Peptide deformylase APY29_RS04640 24894fe9c7e1412edc6e4a3af6c00d6b 171 PRINTS PR01576 Peptide deformylase signature 128 157 1.8E-27 T 28-03-2018 IPR023635 Peptide deformylase APY29_RS04640 24894fe9c7e1412edc6e4a3af6c00d6b 171 PIRSF PIRSF004749 1 166 6.2E-42 T 28-03-2018 IPR023635 Peptide deformylase APY29_RS04640 24894fe9c7e1412edc6e4a3af6c00d6b 171 Gene3D G3DSA:3.90.45.10 1 168 7.9E-50 T 28-03-2018 IPR023635 Peptide deformylase APY29_RS04640 24894fe9c7e1412edc6e4a3af6c00d6b 171 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 3 160 4.5E-33 T 28-03-2018 IPR023635 Peptide deformylase APY29_RS17825 fd4edcc70470d8b2fd5a547935d2f5ba 286 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 137 151 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APY29_RS17825 fd4edcc70470d8b2fd5a547935d2f5ba 286 Pfam PF01479 S4 domain 39 80 2.8E-8 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS17825 fd4edcc70470d8b2fd5a547935d2f5ba 286 Gene3D G3DSA:3.30.70.580 96 179 6.4E-13 T 28-03-2018 APY29_RS17825 fd4edcc70470d8b2fd5a547935d2f5ba 286 Pfam PF00849 RNA pseudouridylate synthase 99 237 2.0E-17 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS17825 fd4edcc70470d8b2fd5a547935d2f5ba 286 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 103 267 8.8E-39 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APY29_RS17825 fd4edcc70470d8b2fd5a547935d2f5ba 286 SUPERFAMILY SSF55120 99 271 2.4E-34 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS17825 fd4edcc70470d8b2fd5a547935d2f5ba 286 Gene3D G3DSA:3.30.70.1560 180 254 1.0E-17 T 28-03-2018 APY29_RS17825 fd4edcc70470d8b2fd5a547935d2f5ba 286 SUPERFAMILY SSF55174 39 122 3.14E-11 T 28-03-2018 APY29_RS17825 fd4edcc70470d8b2fd5a547935d2f5ba 286 Gene3D G3DSA:3.10.290.10 39 94 2.6E-12 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS23155 ca9a4526182c780244869173b9247373 1260 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 11 1251 1.7E-216 T 28-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 APY29_RS23155 ca9a4526182c780244869173b9247373 1260 Pfam PF13361 UvrD-like helicase C-terminal domain 616 680 8.1E-7 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APY29_RS23155 ca9a4526182c780244869173b9247373 1260 Pfam PF13361 UvrD-like helicase C-terminal domain 706 887 2.3E-14 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APY29_RS23155 ca9a4526182c780244869173b9247373 1260 Gene3D G3DSA:3.40.50.300 581 890 1.2E-41 T 28-03-2018 APY29_RS23155 ca9a4526182c780244869173b9247373 1260 SUPERFAMILY SSF52540 562 823 1.33E-93 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23155 ca9a4526182c780244869173b9247373 1260 SUPERFAMILY SSF52540 866 888 1.33E-93 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23155 ca9a4526182c780244869173b9247373 1260 SUPERFAMILY SSF52540 378 530 1.33E-93 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23155 ca9a4526182c780244869173b9247373 1260 SUPERFAMILY SSF52540 14 72 1.33E-93 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23155 ca9a4526182c780244869173b9247373 1260 SUPERFAMILY SSF52540 159 225 1.33E-93 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23155 ca9a4526182c780244869173b9247373 1260 Gene3D G3DSA:3.40.50.300 10 505 3.8E-41 T 28-03-2018 APY29_RS23155 ca9a4526182c780244869173b9247373 1260 SUPERFAMILY SSF52980 953 1253 5.9E-57 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 APY29_RS23155 ca9a4526182c780244869173b9247373 1260 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 6 1252 18.904 T 28-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 APY29_RS23155 ca9a4526182c780244869173b9247373 1260 Gene3D G3DSA:3.90.320.10 942 1259 1.6E-87 T 28-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 APY29_RS23155 ca9a4526182c780244869173b9247373 1260 Pfam PF00580 UvrD/REP helicase N-terminal domain 15 493 2.4E-49 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 APY29_RS23155 ca9a4526182c780244869173b9247373 1260 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1008 1192 6.3E-6 T 28-03-2018 APY29_RS22315 cfcbd67745bc1c801cc0f734ccb10a9b 393 Gene3D G3DSA:3.40.640.10 37 287 2.6E-32 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS22315 cfcbd67745bc1c801cc0f734ccb10a9b 393 SUPERFAMILY SSF53383 15 391 1.17E-55 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS22315 cfcbd67745bc1c801cc0f734ccb10a9b 393 Gene3D G3DSA:3.90.1150.10 288 392 2.8E-6 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS22315 cfcbd67745bc1c801cc0f734ccb10a9b 393 Pfam PF00266 Aminotransferase class-V 68 362 1.5E-24 T 28-03-2018 IPR000192 Aminotransferase class V domain APY29_RS01890 64f090f46a7f8493ee711b91e26e2792 248 SMART SM00382 30 212 1.7E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS01890 64f090f46a7f8493ee711b91e26e2792 248 SUPERFAMILY SSF52540 10 226 2.51E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS01890 64f090f46a7f8493ee711b91e26e2792 248 Pfam PF00005 ABC transporter 22 165 3.8E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS01890 64f090f46a7f8493ee711b91e26e2792 248 Gene3D G3DSA:3.40.50.300 1 244 2.8E-66 T 28-03-2018 APY29_RS16145 40208d2a3c5ca2729b85ca71e4d12f92 240 Pfam PF11967 Recombination protein O N terminal 3 78 1.6E-20 T 28-03-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal APY29_RS16145 40208d2a3c5ca2729b85ca71e4d12f92 240 TIGRFAM TIGR00613 reco: DNA repair protein RecO 7 154 3.9E-22 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APY29_RS16145 40208d2a3c5ca2729b85ca71e4d12f92 240 SUPERFAMILY SSF57863 87 154 8.37E-7 T 28-03-2018 APY29_RS16145 40208d2a3c5ca2729b85ca71e4d12f92 240 Pfam PF02565 Recombination protein O C terminal 84 231 1.4E-16 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APY29_RS16145 40208d2a3c5ca2729b85ca71e4d12f92 240 SUPERFAMILY SSF50249 3 78 7.54E-12 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS16145 40208d2a3c5ca2729b85ca71e4d12f92 240 Hamap MF_00201 DNA repair protein RecO [recO]. 2 236 19.706 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APY29_RS16145 40208d2a3c5ca2729b85ca71e4d12f92 240 Gene3D G3DSA:2.40.50.140 1 78 5.6E-22 T 28-03-2018 APY29_RS02610 e4441b4c421fa73e71573c72f1ccb53a 472 Pfam PF04225 Opacity-associated protein A LysM-like domain 101 168 1.8E-6 T 28-03-2018 IPR007340 Opacity-associated protein A APY29_RS02610 e4441b4c421fa73e71573c72f1ccb53a 472 Pfam PF01551 Peptidase family M23 325 421 1.4E-33 T 28-03-2018 IPR016047 Peptidase M23 APY29_RS02610 e4441b4c421fa73e71573c72f1ccb53a 472 Gene3D G3DSA:2.70.70.10 280 426 3.6E-43 T 28-03-2018 APY29_RS02610 e4441b4c421fa73e71573c72f1ccb53a 472 SUPERFAMILY SSF51261 177 423 7.85E-72 T 28-03-2018 IPR011055 Duplicated hybrid motif APY29_RS13810 ce6f8c1f4b2d194296d186b2d4814e8e 967 Gene3D G3DSA:3.20.20.80 379 778 5.5E-103 T 28-03-2018 APY29_RS13810 ce6f8c1f4b2d194296d186b2d4814e8e 967 Gene3D G3DSA:2.60.40.1180 841 956 5.8E-25 T 28-03-2018 APY29_RS13810 ce6f8c1f4b2d194296d186b2d4814e8e 967 SMART SM00758 238 376 5.0E-29 T 28-03-2018 IPR011658 PA14 domain APY29_RS13810 ce6f8c1f4b2d194296d186b2d4814e8e 967 Gene3D G3DSA:2.60.40.1760 33 217 1.5E-29 T 28-03-2018 APY29_RS13810 ce6f8c1f4b2d194296d186b2d4814e8e 967 Pfam PF16338 Domain of unknown function (DUF4968) 55 135 6.5E-14 T 28-03-2018 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 APY29_RS13810 ce6f8c1f4b2d194296d186b2d4814e8e 967 Pfam PF01055 Glycosyl hydrolases family 31 388 844 1.8E-126 T 28-03-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 APY29_RS13810 ce6f8c1f4b2d194296d186b2d4814e8e 967 SUPERFAMILY SSF51011 760 839 4.89E-21 T 28-03-2018 APY29_RS13810 ce6f8c1f4b2d194296d186b2d4814e8e 967 SUPERFAMILY SSF51445 398 754 2.0E-48 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS13810 ce6f8c1f4b2d194296d186b2d4814e8e 967 Gene3D G3DSA:2.60.120.380 223 352 5.9E-23 T 28-03-2018 APY29_RS13810 ce6f8c1f4b2d194296d186b2d4814e8e 967 SUPERFAMILY SSF74650 57 216 1.41E-26 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APY29_RS13810 ce6f8c1f4b2d194296d186b2d4814e8e 967 Pfam PF17137 Domain of unknown function (DUF5110) 860 928 4.6E-20 T 28-03-2018 IPR033403 Domain of unknown function DUF5110 APY29_RS13810 ce6f8c1f4b2d194296d186b2d4814e8e 967 SUPERFAMILY SSF56988 255 351 6.54E-11 T 28-03-2018 APY29_RS13810 ce6f8c1f4b2d194296d186b2d4814e8e 967 Gene3D G3DSA:2.60.40.1180 779 840 1.9E-30 T 28-03-2018 APY29_RS13810 ce6f8c1f4b2d194296d186b2d4814e8e 967 Pfam PF07691 PA14 domain 275 351 4.1E-9 T 28-03-2018 IPR011658 PA14 domain APY29_RS09215 01f705e8c4117ac1afba61e39804ec1d 332 Gene3D G3DSA:3.40.47.10 166 332 1.0E-30 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS09215 01f705e8c4117ac1afba61e39804ec1d 332 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 243 332 4.2E-23 T 28-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 APY29_RS09215 01f705e8c4117ac1afba61e39804ec1d 332 Gene3D G3DSA:3.40.47.10 4 165 7.4E-28 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS09215 01f705e8c4117ac1afba61e39804ec1d 332 SUPERFAMILY SSF53901 7 332 6.1E-49 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS09215 01f705e8c4117ac1afba61e39804ec1d 332 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 111 191 4.4E-20 T 28-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 APY29_RS10650 f8cb3a6804174db4875f24f6ffe7f0ae 297 SUPERFAMILY SSF53448 5 279 5.86E-63 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS10650 f8cb3a6804174db4875f24f6ffe7f0ae 297 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 267 1.3E-106 T 28-03-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 APY29_RS10650 f8cb3a6804174db4875f24f6ffe7f0ae 297 Gene3D G3DSA:3.90.550.10 1 294 3.8E-57 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS10650 f8cb3a6804174db4875f24f6ffe7f0ae 297 Pfam PF00483 Nucleotidyl transferase 12 268 3.7E-30 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 APY29_RS09410 05c4b7c2e145269fb5c995f3cb99c8e1 523 Pfam PF09286 Pro-kumamolisin, activation domain 17 149 3.3E-14 T 28-03-2018 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 APY29_RS09410 05c4b7c2e145269fb5c995f3cb99c8e1 523 Gene3D G3DSA:3.40.50.200 183 523 2.6E-37 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS09410 05c4b7c2e145269fb5c995f3cb99c8e1 523 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 448 458 - T 28-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site APY29_RS09410 05c4b7c2e145269fb5c995f3cb99c8e1 523 Pfam PF00082 Subtilase family 268 467 1.2E-10 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS09410 05c4b7c2e145269fb5c995f3cb99c8e1 523 SUPERFAMILY SSF52743 185 520 1.27E-63 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS09410 05c4b7c2e145269fb5c995f3cb99c8e1 523 SMART SM00944 13 151 3.2E-26 T 28-03-2018 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 APY29_RS09410 05c4b7c2e145269fb5c995f3cb99c8e1 523 SUPERFAMILY SSF54897 4 159 1.11E-37 T 28-03-2018 IPR009020 Protease propeptides/proteinase inhibitor I9 APY29_RS19530 5eaefbd29ff146c02580d3e11eb22971 681 Gene3D G3DSA:2.170.130.10 22 161 3.0E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS19530 5eaefbd29ff146c02580d3e11eb22971 681 SUPERFAMILY SSF56935 42 680 4.43E-93 T 28-03-2018 APY29_RS19530 5eaefbd29ff146c02580d3e11eb22971 681 Gene3D G3DSA:2.40.170.20 162 680 1.5E-70 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS19530 5eaefbd29ff146c02580d3e11eb22971 681 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 154 1.0E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS19530 5eaefbd29ff146c02580d3e11eb22971 681 Pfam PF00593 TonB dependent receptor 238 680 9.3E-42 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS13135 1fc1add94d3c1312cf750543b7c79172 747 Gene3D G3DSA:1.10.287.1060 211 266 0.07 T 28-03-2018 APY29_RS13135 1fc1add94d3c1312cf750543b7c79172 747 Gene3D G3DSA:1.10.287.950 505 699 1.8E-46 T 28-03-2018 APY29_RS13135 1fc1add94d3c1312cf750543b7c79172 747 Pfam PF12729 Four helix bundle sensory module for signal transduction 9 183 7.5E-19 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain APY29_RS13135 1fc1add94d3c1312cf750543b7c79172 747 Gene3D G3DSA:1.20.120.30 27 186 4.0E-10 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain APY29_RS13135 1fc1add94d3c1312cf750543b7c79172 747 SMART SM00304 395 447 30.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13135 1fc1add94d3c1312cf750543b7c79172 747 SMART SM00304 214 266 1.6E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13135 1fc1add94d3c1312cf750543b7c79172 747 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 508 662 8.2E-51 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS13135 1fc1add94d3c1312cf750543b7c79172 747 SMART SM00283 448 695 1.8E-89 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS13135 1fc1add94d3c1312cf750543b7c79172 747 Gene3D G3DSA:1.20.120.330 267 504 0.0011 T 28-03-2018 APY29_RS13135 1fc1add94d3c1312cf750543b7c79172 747 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 546 573 1.9E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13135 1fc1add94d3c1312cf750543b7c79172 747 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 623 652 1.9E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13135 1fc1add94d3c1312cf750543b7c79172 747 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 469 498 1.9E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13135 1fc1add94d3c1312cf750543b7c79172 747 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 193 218 1.9E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13135 1fc1add94d3c1312cf750543b7c79172 747 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 575 604 1.9E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13135 1fc1add94d3c1312cf750543b7c79172 747 SUPERFAMILY SSF158472 214 264 4.05E-9 T 28-03-2018 APY29_RS13135 1fc1add94d3c1312cf750543b7c79172 747 SUPERFAMILY SSF58104 415 696 5.75E-69 T 28-03-2018 APY29_RS13135 1fc1add94d3c1312cf750543b7c79172 747 Pfam PF00672 HAMP domain 214 262 7.0E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13985 b9ceb4ab60abd2dd8289954b04055a02 344 Gene3D G3DSA:3.40.50.300 26 270 9.1E-45 T 28-03-2018 APY29_RS13985 b9ceb4ab60abd2dd8289954b04055a02 344 Pfam PF00154 recA bacterial DNA recombination protein 7 270 1.2E-139 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APY29_RS13985 b9ceb4ab60abd2dd8289954b04055a02 344 PRINTS PR00142 RecA protein signature 165 194 2.8E-85 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APY29_RS13985 b9ceb4ab60abd2dd8289954b04055a02 344 PRINTS PR00142 RecA protein signature 212 240 2.8E-85 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APY29_RS13985 b9ceb4ab60abd2dd8289954b04055a02 344 PRINTS PR00142 RecA protein signature 299 316 2.8E-85 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APY29_RS13985 b9ceb4ab60abd2dd8289954b04055a02 344 PRINTS PR00142 RecA protein signature 127 156 2.8E-85 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APY29_RS13985 b9ceb4ab60abd2dd8289954b04055a02 344 PRINTS PR00142 RecA protein signature 245 274 2.8E-85 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APY29_RS13985 b9ceb4ab60abd2dd8289954b04055a02 344 PRINTS PR00142 RecA protein signature 93 122 2.8E-85 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APY29_RS13985 b9ceb4ab60abd2dd8289954b04055a02 344 Hamap MF_00268 Protein RecA [recA]. 5 331 50.729 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APY29_RS13985 b9ceb4ab60abd2dd8289954b04055a02 344 SMART SM00382 57 230 2.8E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS13985 b9ceb4ab60abd2dd8289954b04055a02 344 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 326 3.0E-166 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APY29_RS13985 b9ceb4ab60abd2dd8289954b04055a02 344 SUPERFAMILY SSF52540 4 269 7.02E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS13985 b9ceb4ab60abd2dd8289954b04055a02 344 Gene3D G3DSA:3.30.250.10 271 328 1.4E-25 T 28-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal APY29_RS13985 b9ceb4ab60abd2dd8289954b04055a02 344 ProSitePatterns PS00321 recA signature. 215 223 - T 28-03-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 APY29_RS13985 b9ceb4ab60abd2dd8289954b04055a02 344 SUPERFAMILY SSF54752 270 327 6.93E-21 T 28-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal APY29_RS06150 5742dd6721483d178a1a7794e4ac32f3 244 Pfam PF02654 Cobalamin-5-phosphate synthase 8 237 7.9E-51 T 28-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 APY29_RS06150 5742dd6721483d178a1a7794e4ac32f3 244 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 244 48.317 T 28-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 APY29_RS06150 5742dd6721483d178a1a7794e4ac32f3 244 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 1 239 3.2E-35 T 28-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 APY29_RS04020 5b86de20d256297a020818a6b5864e8e 171 SUPERFAMILY SSF54637 2 169 1.86E-54 T 28-03-2018 IPR029069 HotDog domain APY29_RS04020 5b86de20d256297a020818a6b5864e8e 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 3 171 1.5E-93 T 28-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 APY29_RS04020 5b86de20d256297a020818a6b5864e8e 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 171 49.869 T 28-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 APY29_RS04020 5b86de20d256297a020818a6b5864e8e 171 Pfam PF07977 FabA-like domain 28 158 9.7E-51 T 28-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 APY29_RS04020 5b86de20d256297a020818a6b5864e8e 171 Gene3D G3DSA:3.10.129.10 1 171 2.3E-48 T 28-03-2018 APY29_RS11365 46b7e2d385a11556c8c6221214f95808 505 Pfam PF07916 TraG-like protein, N-terminal region 10 488 7.8E-97 T 28-03-2018 IPR012931 TraG-like, N-terminal APY29_RS09685 631a1eb52004a2155b4e5e68fccca7db 475 Gene3D G3DSA:1.20.1250.20 265 469 2.1E-20 T 28-03-2018 APY29_RS09685 631a1eb52004a2155b4e5e68fccca7db 475 Pfam PF07690 Major Facilitator Superfamily 25 416 9.6E-55 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS09685 631a1eb52004a2155b4e5e68fccca7db 475 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 23 424 1.3E-69 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 APY29_RS09685 631a1eb52004a2155b4e5e68fccca7db 475 SUPERFAMILY SSF103473 12 204 4.05E-63 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS09685 631a1eb52004a2155b4e5e68fccca7db 475 SUPERFAMILY SSF103473 255 462 4.05E-63 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS09685 631a1eb52004a2155b4e5e68fccca7db 475 Gene3D G3DSA:1.20.1250.20 13 203 1.3E-33 T 28-03-2018 APY29_RS02520 2744ec1c05d352c11cfe404bff733f48 225 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 1.6E-67 T 28-03-2018 IPR001405 RadC protein APY29_RS02520 2744ec1c05d352c11cfe404bff733f48 225 Gene3D G3DSA:3.40.140.10 99 224 3.6E-45 T 28-03-2018 APY29_RS02520 2744ec1c05d352c11cfe404bff733f48 225 Gene3D G3DSA:1.10.150.20 10 87 9.7E-4 T 28-03-2018 APY29_RS02520 2744ec1c05d352c11cfe404bff733f48 225 SUPERFAMILY SSF47781 16 88 9.45E-6 T 28-03-2018 IPR010994 RuvA domain 2-like APY29_RS02520 2744ec1c05d352c11cfe404bff733f48 225 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 28-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site APY29_RS02520 2744ec1c05d352c11cfe404bff733f48 225 Pfam PF04002 RadC-like JAB domain 104 222 3.6E-42 T 28-03-2018 IPR025657 RadC-like JAB domain APY29_RS13600 b0f75b0ec43193a5db0729277f434a84 510 Gene3D G3DSA:3.40.605.10 14 281 7.7E-70 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APY29_RS13600 b0f75b0ec43193a5db0729277f434a84 510 Gene3D G3DSA:3.40.309.10 282 478 1.3E-54 T 28-03-2018 APY29_RS13600 b0f75b0ec43193a5db0729277f434a84 510 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 263 270 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APY29_RS13600 b0f75b0ec43193a5db0729277f434a84 510 SUPERFAMILY SSF53720 21 498 3.53E-131 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APY29_RS13600 b0f75b0ec43193a5db0729277f434a84 510 Pfam PF00171 Aldehyde dehydrogenase family 28 491 3.1E-128 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APY29_RS06910 44fdee8a0f8d5fdb37c55e689f9e3f0c 214 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 14 211 9.2E-64 T 28-03-2018 IPR005744 Hly-III GO:0016021|GO:0019835 APY29_RS06910 44fdee8a0f8d5fdb37c55e689f9e3f0c 214 Pfam PF03006 Haemolysin-III related 12 206 1.3E-36 T 28-03-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 APY29_RS13180 92369d036ba19aa9022c65a284f5da7e 265 Pfam PF07238 PilZ domain 135 252 2.8E-12 T 28-03-2018 IPR009875 PilZ domain GO:0035438 APY29_RS13180 92369d036ba19aa9022c65a284f5da7e 265 SUPERFAMILY SSF141371 131 241 2.94E-5 T 28-03-2018 APY29_RS13180 92369d036ba19aa9022c65a284f5da7e 265 Pfam PF07317 Flagellar regulator YcgR 27 132 1.3E-26 T 28-03-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal APY29_RS13180 92369d036ba19aa9022c65a284f5da7e 265 Gene3D G3DSA:2.40.10.220 133 264 8.0E-18 T 28-03-2018 APY29_RS13180 92369d036ba19aa9022c65a284f5da7e 265 Gene3D G3DSA:2.30.110.10 28 132 1.8E-24 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 APY29_RS13180 92369d036ba19aa9022c65a284f5da7e 265 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 22 261 29.912 T 28-03-2018 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 APY29_RS13730 ed3edfa2109f8e9393f6c416c3de1134 504 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 40 483 37.69 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS13730 ed3edfa2109f8e9393f6c416c3de1134 504 Gene3D G3DSA:1.10.1390.10 480 504 1.5E-7 T 28-03-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS13730 ed3edfa2109f8e9393f6c416c3de1134 504 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 243 256 - T 28-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS13730 ed3edfa2109f8e9393f6c416c3de1134 504 Gene3D G3DSA:3.40.50.10490 127 227 3.7E-29 T 28-03-2018 APY29_RS13730 ed3edfa2109f8e9393f6c416c3de1134 504 Pfam PF00342 Phosphoglucose isomerase 47 498 2.6E-150 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS13730 ed3edfa2109f8e9393f6c416c3de1134 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 316 337 7.0E-46 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS13730 ed3edfa2109f8e9393f6c416c3de1134 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 424 442 7.0E-46 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS13730 ed3edfa2109f8e9393f6c416c3de1134 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 456 469 7.0E-46 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS13730 ed3edfa2109f8e9393f6c416c3de1134 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 134 153 7.0E-46 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS13730 ed3edfa2109f8e9393f6c416c3de1134 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 239 257 7.0E-46 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS13730 ed3edfa2109f8e9393f6c416c3de1134 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 442 456 7.0E-46 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS13730 ed3edfa2109f8e9393f6c416c3de1134 504 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 456 473 - T 28-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS13730 ed3edfa2109f8e9393f6c416c3de1134 504 Gene3D G3DSA:3.40.50.10490 228 479 2.6E-100 T 28-03-2018 APY29_RS13730 ed3edfa2109f8e9393f6c416c3de1134 504 SUPERFAMILY SSF53697 2 502 7.23E-153 T 28-03-2018 APY29_RS13730 ed3edfa2109f8e9393f6c416c3de1134 504 Gene3D G3DSA:3.40.50.10490 2 126 3.1E-24 T 28-03-2018 APY29_RS14045 fbe9a73b63e7dacfc45b3cc3fd778c0f 265 SUPERFAMILY SSF51261 66 262 2.93E-45 T 28-03-2018 IPR011055 Duplicated hybrid motif APY29_RS14045 fbe9a73b63e7dacfc45b3cc3fd778c0f 265 Gene3D G3DSA:2.70.70.10 131 265 5.5E-35 T 28-03-2018 APY29_RS14045 fbe9a73b63e7dacfc45b3cc3fd778c0f 265 Pfam PF01476 LysM domain 66 108 7.1E-16 T 28-03-2018 IPR018392 LysM domain APY29_RS14045 fbe9a73b63e7dacfc45b3cc3fd778c0f 265 SMART SM00257 65 109 8.2E-16 T 28-03-2018 IPR018392 LysM domain APY29_RS14045 fbe9a73b63e7dacfc45b3cc3fd778c0f 265 Gene3D G3DSA:3.10.350.10 62 123 2.3E-19 T 28-03-2018 APY29_RS14045 fbe9a73b63e7dacfc45b3cc3fd778c0f 265 Pfam PF01551 Peptidase family M23 164 258 1.2E-28 T 28-03-2018 IPR016047 Peptidase M23 APY29_RS14185 95e947d2634b74f3975c53c2a08cff0c 404 Pfam PF14907 Uncharacterised nucleotidyltransferase 36 261 1.4E-29 T 28-03-2018 APY29_RS04100 99df8ee7ab072576b256727dbc49773b 220 SUPERFAMILY SSF52833 5 110 2.24E-19 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS04100 99df8ee7ab072576b256727dbc49773b 220 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 7 218 3.1E-89 T 28-03-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-71182 APY29_RS04100 99df8ee7ab072576b256727dbc49773b 220 Gene3D G3DSA:3.40.30.10 1 103 1.1E-24 T 28-03-2018 APY29_RS04100 99df8ee7ab072576b256727dbc49773b 220 SUPERFAMILY SSF47616 88 217 3.41E-31 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like APY29_RS04100 99df8ee7ab072576b256727dbc49773b 220 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 84 1.6E-12 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APY29_RS04100 99df8ee7ab072576b256727dbc49773b 220 Gene3D G3DSA:1.20.1050.10 104 220 1.1E-26 T 28-03-2018 APY29_RS01770 b571133d93a34a9018fca54c56fb6f6a 832 SUPERFAMILY SSF48168 71 292 1.57E-48 T 28-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APY29_RS01770 b571133d93a34a9018fca54c56fb6f6a 832 SUPERFAMILY SSF51998 293 831 3.36E-162 T 28-03-2018 APY29_RS01770 b571133d93a34a9018fca54c56fb6f6a 832 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 689 711 - T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APY29_RS01770 b571133d93a34a9018fca54c56fb6f6a 832 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 207 290 6.5E-15 T 28-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APY29_RS01770 b571133d93a34a9018fca54c56fb6f6a 832 Gene3D G3DSA:3.20.70.20 189 824 2.6E-176 T 28-03-2018 APY29_RS01770 b571133d93a34a9018fca54c56fb6f6a 832 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 211 819 1.4E-166 T 28-03-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APY29_RS01770 b571133d93a34a9018fca54c56fb6f6a 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 573 596 1.7E-37 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APY29_RS01770 b571133d93a34a9018fca54c56fb6f6a 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 639 662 1.7E-37 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APY29_RS01770 b571133d93a34a9018fca54c56fb6f6a 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 700 727 1.7E-37 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APY29_RS01770 b571133d93a34a9018fca54c56fb6f6a 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 369 388 1.7E-37 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APY29_RS01770 b571133d93a34a9018fca54c56fb6f6a 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 512 523 1.7E-37 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APY29_RS01770 b571133d93a34a9018fca54c56fb6f6a 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 611 633 1.7E-37 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APY29_RS01770 b571133d93a34a9018fca54c56fb6f6a 832 Pfam PF02867 Ribonucleotide reductase, barrel domain 294 816 2.5E-144 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APY29_RS17675 3356226080b1f9b150b9028a6091059c 447 Pfam PF11808 Domain of unknown function (DUF3329) 13 98 1.7E-21 T 28-03-2018 IPR021766 Protein of unknown function DUF3329 GO:0004673 APY29_RS17675 3356226080b1f9b150b9028a6091059c 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 2.9E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS17675 3356226080b1f9b150b9028a6091059c 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 2.9E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS17675 3356226080b1f9b150b9028a6091059c 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 411 2.9E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS17675 3356226080b1f9b150b9028a6091059c 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 430 2.9E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS17675 3356226080b1f9b150b9028a6091059c 447 SMART SM00388 214 278 2.6E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS17675 3356226080b1f9b150b9028a6091059c 447 Gene3D G3DSA:1.10.287.130 212 274 1.1E-17 T 28-03-2018 APY29_RS17675 3356226080b1f9b150b9028a6091059c 447 SUPERFAMILY SSF47384 201 278 1.08E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS17675 3356226080b1f9b150b9028a6091059c 447 Gene3D G3DSA:3.30.450.20 90 211 4.3E-11 T 28-03-2018 APY29_RS17675 3356226080b1f9b150b9028a6091059c 447 SMART SM00091 105 172 0.0092 T 28-03-2018 IPR000014 PAS domain APY29_RS17675 3356226080b1f9b150b9028a6091059c 447 SUPERFAMILY SSF55874 267 429 8.51E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS17675 3356226080b1f9b150b9028a6091059c 447 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 430 2.0E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS17675 3356226080b1f9b150b9028a6091059c 447 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 102 429 3.8E-125 T 28-03-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 APY29_RS17675 3356226080b1f9b150b9028a6091059c 447 SMART SM00387 321 433 9.5E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS17675 3356226080b1f9b150b9028a6091059c 447 SUPERFAMILY SSF55785 92 205 8.37E-7 T 28-03-2018 IPR000014 PAS domain APY29_RS17675 3356226080b1f9b150b9028a6091059c 447 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 277 4.9E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS17675 3356226080b1f9b150b9028a6091059c 447 Gene3D G3DSA:3.30.565.10 291 444 3.6E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS15110 2beef1a04f7448dd0e6f02b0a8b5d692 495 Pfam PF08007 Cupin superfamily protein 25 337 1.0E-102 T 28-03-2018 IPR003347 JmjC domain APY29_RS15110 2beef1a04f7448dd0e6f02b0a8b5d692 495 SMART SM00558 112 241 3.8E-5 T 28-03-2018 IPR003347 JmjC domain APY29_RS15110 2beef1a04f7448dd0e6f02b0a8b5d692 495 Gene3D G3DSA:2.60.120.650 22 232 1.2E-28 T 28-03-2018 APY29_RS15110 2beef1a04f7448dd0e6f02b0a8b5d692 495 SUPERFAMILY SSF51197 22 317 3.57E-67 T 28-03-2018 APY29_RS08745 250f9099aff35e8d33ffc332e378ad2e 184 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 38 177 2.2E-76 T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08745 250f9099aff35e8d33ffc332e378ad2e 184 SUPERFAMILY SSF56770 35 179 8.11E-66 T 28-03-2018 APY29_RS08745 250f9099aff35e8d33ffc332e378ad2e 184 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 177 41.238 T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08745 250f9099aff35e8d33ffc332e378ad2e 184 Gene3D G3DSA:3.40.50.700 34 182 1.4E-48 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08745 250f9099aff35e8d33ffc332e378ad2e 184 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 63 172 5.0E-23 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08745 250f9099aff35e8d33ffc332e378ad2e 184 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 144 160 - T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS11165 0c1520cd590399cda264e361041b03a8 589 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 16 586 2.8E-239 T 28-03-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 APY29_RS11165 0c1520cd590399cda264e361041b03a8 589 Pfam PF00005 ABC transporter 363 513 1.4E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS11165 0c1520cd590399cda264e361041b03a8 589 SUPERFAMILY SSF52540 335 584 2.46E-87 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11165 0c1520cd590399cda264e361041b03a8 589 SUPERFAMILY SSF90123 18 332 4.45E-66 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS11165 0c1520cd590399cda264e361041b03a8 589 Gene3D G3DSA:3.40.50.300 343 580 3.3E-72 T 28-03-2018 APY29_RS11165 0c1520cd590399cda264e361041b03a8 589 Gene3D G3DSA:1.20.1560.10 11 336 5.8E-63 T 28-03-2018 APY29_RS11165 0c1520cd590399cda264e361041b03a8 589 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS11165 0c1520cd590399cda264e361041b03a8 589 SMART SM00382 372 559 7.4E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS11165 0c1520cd590399cda264e361041b03a8 589 Pfam PF00664 ABC transporter transmembrane region 32 298 2.9E-39 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS12830 1eef36f9dd79112c3817c8d111f251d2 65 Gene3D G3DSA:1.10.10.10 1 64 3.5E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS12830 1eef36f9dd79112c3817c8d111f251d2 65 SUPERFAMILY SSF46689 3 55 7.7E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS12830 1eef36f9dd79112c3817c8d111f251d2 65 Pfam PF01527 Transposase 1 53 6.0E-16 T 28-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APY29_RS12930 42b6b5b9573a75b2282d5aaf06eb3df9 695 SMART SM00052 432 678 1.6E-119 T 28-03-2018 IPR001633 EAL domain APY29_RS12930 42b6b5b9573a75b2282d5aaf06eb3df9 695 Gene3D G3DSA:3.30.70.270 263 430 3.4E-56 T 28-03-2018 APY29_RS12930 42b6b5b9573a75b2282d5aaf06eb3df9 695 SUPERFAMILY SSF141868 438 683 3.4E-91 T 28-03-2018 IPR001633 EAL domain APY29_RS12930 42b6b5b9573a75b2282d5aaf06eb3df9 695 Gene3D G3DSA:3.20.20.450 431 690 5.4E-104 T 28-03-2018 IPR001633 EAL domain APY29_RS12930 42b6b5b9573a75b2282d5aaf06eb3df9 695 SMART SM00267 251 422 4.4E-56 T 28-03-2018 IPR000160 GGDEF domain APY29_RS12930 42b6b5b9573a75b2282d5aaf06eb3df9 695 Pfam PF00990 Diguanylate cyclase, GGDEF domain 263 418 2.9E-43 T 28-03-2018 IPR000160 GGDEF domain APY29_RS12930 42b6b5b9573a75b2282d5aaf06eb3df9 695 SUPERFAMILY SSF55073 267 423 9.42E-47 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS12930 42b6b5b9573a75b2282d5aaf06eb3df9 695 Pfam PF03707 Bacterial signalling protein N terminal repeat 114 167 4.0E-15 T 28-03-2018 IPR005330 MHYT domain APY29_RS12930 42b6b5b9573a75b2282d5aaf06eb3df9 695 Pfam PF03707 Bacterial signalling protein N terminal repeat 51 106 1.9E-18 T 28-03-2018 IPR005330 MHYT domain APY29_RS12930 42b6b5b9573a75b2282d5aaf06eb3df9 695 Pfam PF03707 Bacterial signalling protein N terminal repeat 180 240 1.8E-7 T 28-03-2018 IPR005330 MHYT domain APY29_RS12930 42b6b5b9573a75b2282d5aaf06eb3df9 695 Pfam PF00563 EAL domain 438 673 4.1E-77 T 28-03-2018 IPR001633 EAL domain APY29_RS12930 42b6b5b9573a75b2282d5aaf06eb3df9 695 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 260 421 4.7E-38 T 28-03-2018 IPR000160 GGDEF domain APY29_RS01930 30b648f084e481d1aeb5e047f8a2cc09 229 Gene3D G3DSA:1.20.1050.10 100 195 2.0E-30 T 28-03-2018 APY29_RS01930 30b648f084e481d1aeb5e047f8a2cc09 229 SUPERFAMILY SSF47616 78 206 4.91E-35 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like APY29_RS01930 30b648f084e481d1aeb5e047f8a2cc09 229 Gene3D G3DSA:3.40.30.10 1 99 8.6E-30 T 28-03-2018 APY29_RS01930 30b648f084e481d1aeb5e047f8a2cc09 229 SUPERFAMILY SSF52833 1 84 3.25E-22 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS01930 30b648f084e481d1aeb5e047f8a2cc09 229 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 81 1.5E-14 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APY29_RS01930 30b648f084e481d1aeb5e047f8a2cc09 229 Pfam PF00043 Glutathione S-transferase, C-terminal domain 133 197 9.6E-13 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal APY29_RS05720 7ff6f8965a3d40eba968538ed98af9be 143 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 28-03-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site APY29_RS05720 7ff6f8965a3d40eba968538ed98af9be 143 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 136 26.473 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APY29_RS05720 7ff6f8965a3d40eba968538ed98af9be 143 SUPERFAMILY SSF81330 12 129 5.23E-36 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APY29_RS05720 7ff6f8965a3d40eba968538ed98af9be 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 89 97 2.9E-13 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APY29_RS05720 7ff6f8965a3d40eba968538ed98af9be 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 98 107 2.9E-13 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APY29_RS05720 7ff6f8965a3d40eba968538ed98af9be 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 2.9E-13 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APY29_RS05720 7ff6f8965a3d40eba968538ed98af9be 143 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 134 2.6E-40 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APY29_RS05720 7ff6f8965a3d40eba968538ed98af9be 143 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 133 2.8E-44 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APY29_RS20465 f7e7bf21439809093d102fe7a45f0afc 306 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 304 1.2E-90 T 28-03-2018 APY29_RS20465 f7e7bf21439809093d102fe7a45f0afc 306 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 297 3.2E-65 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 APY29_RS20465 f7e7bf21439809093d102fe7a45f0afc 306 SUPERFAMILY SSF53335 54 298 4.15E-39 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS20465 f7e7bf21439809093d102fe7a45f0afc 306 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 304 30.633 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 APY29_RS20465 f7e7bf21439809093d102fe7a45f0afc 306 PIRSF PIRSF000401 1 306 1.2E-95 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 APY29_RS20465 f7e7bf21439809093d102fe7a45f0afc 306 Gene3D G3DSA:3.40.50.150 106 305 9.2E-31 T 28-03-2018 APY29_RS08855 990ad74c94303f1b5dbfb5fc32a879b6 295 SUPERFAMILY SSF54675 15 117 4.71E-26 T 28-03-2018 APY29_RS08855 990ad74c94303f1b5dbfb5fc32a879b6 295 Gene3D G3DSA:3.90.1170.20 5 144 1.2E-38 T 28-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 APY29_RS08855 990ad74c94303f1b5dbfb5fc32a879b6 295 PIRSF PIRSF006250 14 291 8.9E-81 T 28-03-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 APY29_RS08855 990ad74c94303f1b5dbfb5fc32a879b6 295 SUPERFAMILY SSF51690 120 289 3.69E-53 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 APY29_RS08855 990ad74c94303f1b5dbfb5fc32a879b6 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 22 288 2.6E-81 T 28-03-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 APY29_RS08855 990ad74c94303f1b5dbfb5fc32a879b6 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 31 117 1.5E-20 T 28-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 APY29_RS08855 990ad74c94303f1b5dbfb5fc32a879b6 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 120 288 2.4E-51 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 APY29_RS08855 990ad74c94303f1b5dbfb5fc32a879b6 295 Gene3D G3DSA:3.20.20.70 145 279 3.3E-36 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS15935 b85b088f4ac0e22cfb5a2a65f02f08f1 151 Gene3D G3DSA:1.20.1260.10 2 146 2.0E-15 T 28-03-2018 IPR012347 Ferritin-related APY29_RS15935 b85b088f4ac0e22cfb5a2a65f02f08f1 151 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 7 144 1.5E-55 T 28-03-2018 IPR011971 Conserved hypothetical protein CHP02284 APY29_RS15935 b85b088f4ac0e22cfb5a2a65f02f08f1 151 Pfam PF09537 Domain of unknown function (DUF2383) 7 114 6.2E-30 T 28-03-2018 IPR019052 Domain of unknown function DUF2383 APY29_RS10215 59ae2cb23f32ba18359d423952e429d9 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 185 9.9E-28 T 28-03-2018 IPR023214 HAD-like domain APY29_RS10215 59ae2cb23f32ba18359d423952e429d9 221 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 70 179 2.0E-7 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS10215 59ae2cb23f32ba18359d423952e429d9 221 SUPERFAMILY SSF56784 5 213 1.6E-50 T 28-03-2018 IPR023214 HAD-like domain APY29_RS10215 59ae2cb23f32ba18359d423952e429d9 221 Gene3D G3DSA:1.10.150.240 19 74 6.8E-10 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 APY29_RS10215 59ae2cb23f32ba18359d423952e429d9 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 168 7.9E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS10215 59ae2cb23f32ba18359d423952e429d9 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 7.9E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS10215 59ae2cb23f32ba18359d423952e429d9 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 99 112 7.9E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS10215 59ae2cb23f32ba18359d423952e429d9 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 7.9E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS10215 59ae2cb23f32ba18359d423952e429d9 221 Gene3D G3DSA:3.40.50.1000 75 214 7.6E-28 T 28-03-2018 IPR023214 HAD-like domain APY29_RS10215 59ae2cb23f32ba18359d423952e429d9 221 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 7 212 2.9E-74 T 28-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 APY29_RS15200 4a4cd96214bf4bd7e7a80560e8b90a8a 197 Pfam PF01025 GrpE 37 195 8.3E-47 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 APY29_RS15200 4a4cd96214bf4bd7e7a80560e8b90a8a 197 Gene3D G3DSA:2.30.22.10 139 195 1.8E-21 T 28-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 APY29_RS15200 4a4cd96214bf4bd7e7a80560e8b90a8a 197 SUPERFAMILY SSF51064 141 196 2.35E-18 T 28-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 APY29_RS15200 4a4cd96214bf4bd7e7a80560e8b90a8a 197 SUPERFAMILY SSF58014 45 139 6.15E-22 T 28-03-2018 APY29_RS15200 4a4cd96214bf4bd7e7a80560e8b90a8a 197 ProSitePatterns PS01071 grpE protein signature. 150 193 - T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 APY29_RS15200 4a4cd96214bf4bd7e7a80560e8b90a8a 197 Gene3D G3DSA:3.90.20.20 38 137 5.6E-22 T 28-03-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 APY29_RS15200 4a4cd96214bf4bd7e7a80560e8b90a8a 197 Hamap MF_01151 Protein GrpE [grpE]. 28 195 19.515 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 APY29_RS15200 4a4cd96214bf4bd7e7a80560e8b90a8a 197 PRINTS PR00773 GrpE protein signature 67 83 8.6E-24 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 APY29_RS15200 4a4cd96214bf4bd7e7a80560e8b90a8a 197 PRINTS PR00773 GrpE protein signature 95 110 8.6E-24 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 APY29_RS15200 4a4cd96214bf4bd7e7a80560e8b90a8a 197 PRINTS PR00773 GrpE protein signature 147 162 8.6E-24 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 APY29_RS15200 4a4cd96214bf4bd7e7a80560e8b90a8a 197 PRINTS PR00773 GrpE protein signature 174 193 8.6E-24 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 APY29_RS06525 2314d453994426ef134b67c5d139c2c1 728 SUPERFAMILY SSF81301 206 378 8.83E-64 T 28-03-2018 APY29_RS06525 2314d453994426ef134b67c5d139c2c1 728 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 65 725 1.5E-162 T 28-03-2018 IPR004811 RelA/SpoT family GO:0015969 APY29_RS06525 2314d453994426ef134b67c5d139c2c1 728 Pfam PF13328 HD domain 64 190 1.1E-17 T 28-03-2018 IPR003607 HD/PDEase domain APY29_RS06525 2314d453994426ef134b67c5d139c2c1 728 SUPERFAMILY SSF81271 396 460 1.24E-19 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APY29_RS06525 2314d453994426ef134b67c5d139c2c1 728 Gene3D G3DSA:3.30.460.10 206 339 3.5E-43 T 28-03-2018 APY29_RS06525 2314d453994426ef134b67c5d139c2c1 728 SUPERFAMILY SSF109604 61 204 3.77E-22 T 28-03-2018 APY29_RS06525 2314d453994426ef134b67c5d139c2c1 728 Gene3D G3DSA:3.30.70.260 648 728 4.3E-9 T 28-03-2018 APY29_RS06525 2314d453994426ef134b67c5d139c2c1 728 Pfam PF02824 TGS domain 402 460 2.9E-20 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 APY29_RS06525 2314d453994426ef134b67c5d139c2c1 728 Pfam PF13291 ACT domain 649 726 3.5E-18 T 28-03-2018 IPR002912 ACT domain APY29_RS06525 2314d453994426ef134b67c5d139c2c1 728 Pfam PF04607 Region found in RelA / SpoT proteins 249 359 2.2E-37 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 APY29_RS06525 2314d453994426ef134b67c5d139c2c1 728 SUPERFAMILY SSF55021 651 726 3.82E-8 T 28-03-2018 APY29_RS06525 2314d453994426ef134b67c5d139c2c1 728 SMART SM00954 249 359 2.5E-67 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 APY29_RS06525 2314d453994426ef134b67c5d139c2c1 728 Gene3D G3DSA:3.10.20.30 395 470 4.7E-23 T 28-03-2018 IPR012675 Beta-grasp domain APY29_RS17540 db9c97a63004969b2624a536238d0063 234 SUPERFAMILY SSF81606 2 232 3.92E-62 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 APY29_RS17540 db9c97a63004969b2624a536238d0063 234 SMART SM00332 3 231 2.6E-18 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 APY29_RS17540 db9c97a63004969b2624a536238d0063 234 SMART SM00331 8 233 4.0E-28 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 APY29_RS17540 db9c97a63004969b2624a536238d0063 234 Gene3D G3DSA:3.60.40.10 1 232 6.5E-44 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 APY29_RS17540 db9c97a63004969b2624a536238d0063 234 Pfam PF13672 Protein phosphatase 2C 17 193 2.1E-13 T 28-03-2018 APY29_RS21785 3264045df5f9a391eaf54982398ba384 142 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 8 140 3.2E-55 T 28-03-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 APY29_RS21785 3264045df5f9a391eaf54982398ba384 142 SUPERFAMILY SSF82784 5 141 2.09E-44 T 28-03-2018 IPR003718 OsmC/Ohr family APY29_RS21785 3264045df5f9a391eaf54982398ba384 142 Pfam PF02566 OsmC-like protein 44 139 2.0E-19 T 28-03-2018 IPR003718 OsmC/Ohr family APY29_RS21785 3264045df5f9a391eaf54982398ba384 142 Gene3D G3DSA:2.20.25.10 5 48 2.0E-19 T 28-03-2018 APY29_RS21785 3264045df5f9a391eaf54982398ba384 142 Gene3D G3DSA:3.30.300.20 49 142 1.7E-24 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta APY29_RS00480 5fc9307d3b5a04ece3765042091d4d07 714 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 274 515 3.2E-32 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 APY29_RS00480 5fc9307d3b5a04ece3765042091d4d07 714 SUPERFAMILY SSF51695 273 406 7.06E-21 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APY29_RS00480 5fc9307d3b5a04ece3765042091d4d07 714 Gene3D G3DSA:3.20.20.190 242 540 6.0E-29 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APY29_RS18565 34843eda0a1370f49857628c7e454d2b 402 SUPERFAMILY SSF51905 5 179 1.44E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS18565 34843eda0a1370f49857628c7e454d2b 402 SUPERFAMILY SSF51905 269 380 1.44E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS18565 34843eda0a1370f49857628c7e454d2b 402 Pfam PF01494 FAD binding domain 6 339 4.9E-30 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 APY29_RS18565 34843eda0a1370f49857628c7e454d2b 402 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 6 389 4.5E-134 T 28-03-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 APY29_RS18565 34843eda0a1370f49857628c7e454d2b 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 389 9.3E-109 T 28-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 APY29_RS18565 34843eda0a1370f49857628c7e454d2b 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 1.9E-20 T 28-03-2018 APY29_RS18565 34843eda0a1370f49857628c7e454d2b 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 1.9E-20 T 28-03-2018 APY29_RS18565 34843eda0a1370f49857628c7e454d2b 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 1.9E-20 T 28-03-2018 APY29_RS18565 34843eda0a1370f49857628c7e454d2b 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.9E-20 T 28-03-2018 APY29_RS18565 34843eda0a1370f49857628c7e454d2b 402 Gene3D G3DSA:3.50.50.60 1 393 6.5E-37 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS19775 032d905c6319463b587fee4c4f41ab7b 253 SUPERFAMILY SSF53335 22 249 4.96E-44 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS19775 032d905c6319463b587fee4c4f41ab7b 253 Gene3D G3DSA:3.40.50.150 9 252 3.4E-44 T 28-03-2018 APY29_RS19775 032d905c6319463b587fee4c4f41ab7b 253 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 160 174 - T 28-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 APY29_RS19775 032d905c6319463b587fee4c4f41ab7b 253 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 18 252 37.819 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 APY29_RS19775 032d905c6319463b587fee4c4f41ab7b 253 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 38 53 - T 28-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 APY29_RS19775 032d905c6319463b587fee4c4f41ab7b 253 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 27 252 1.2E-80 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 APY29_RS19775 032d905c6319463b587fee4c4f41ab7b 253 Pfam PF01209 ubiE/COQ5 methyltransferase family 23 252 1.4E-89 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 APY29_RS17600 19d31eca505ab5141a29ed05774cbb5d 428 Gene3D G3DSA:3.40.50.300 58 317 2.2E-71 T 28-03-2018 APY29_RS17600 19d31eca505ab5141a29ed05774cbb5d 428 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 397 4.7E-17 T 28-03-2018 IPR019489 Clp ATPase, C-terminal APY29_RS17600 19d31eca505ab5141a29ed05774cbb5d 428 SMART SM00994 15 54 3.7E-24 T 28-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 APY29_RS17600 19d31eca505ab5141a29ed05774cbb5d 428 SMART SM01086 319 414 7.6E-34 T 28-03-2018 IPR019489 Clp ATPase, C-terminal APY29_RS17600 19d31eca505ab5141a29ed05774cbb5d 428 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 14 414 6.1E-206 T 28-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 APY29_RS17600 19d31eca505ab5141a29ed05774cbb5d 428 SMART SM00382 113 266 1.1E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS17600 19d31eca505ab5141a29ed05774cbb5d 428 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 2.2E-50 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APY29_RS17600 19d31eca505ab5141a29ed05774cbb5d 428 Pfam PF06689 ClpX C4-type zinc finger 16 53 2.2E-20 T 28-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 APY29_RS17600 19d31eca505ab5141a29ed05774cbb5d 428 SUPERFAMILY SSF57716 16 51 9.27E-12 T 28-03-2018 APY29_RS17600 19d31eca505ab5141a29ed05774cbb5d 428 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 9 417 53.387 T 28-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 APY29_RS17600 19d31eca505ab5141a29ed05774cbb5d 428 SUPERFAMILY SSF52540 64 407 5.94E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17600 19d31eca505ab5141a29ed05774cbb5d 428 Gene3D G3DSA:1.10.8.60 319 411 1.6E-33 T 28-03-2018 APY29_RS00155 de78dde37e9afa7c740fdcbf6e907c20 464 SUPERFAMILY SSF56349 143 441 5.0E-34 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APY29_RS00155 de78dde37e9afa7c740fdcbf6e907c20 464 Gene3D G3DSA:1.10.150.130 139 257 3.0E-12 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal APY29_RS00155 de78dde37e9afa7c740fdcbf6e907c20 464 Gene3D G3DSA:1.10.443.10 259 442 2.4E-20 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS00155 de78dde37e9afa7c740fdcbf6e907c20 464 Pfam PF00589 Phage integrase family 282 429 3.1E-7 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS03755 b9aeafc107c7f3451c0f671de6317a9f 161 Gene3D G3DSA:3.30.70.860 96 160 8.2E-30 T 28-03-2018 IPR035571 UPF0234/UPF0381 domain APY29_RS03755 b9aeafc107c7f3451c0f671de6317a9f 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 28.996 T 28-03-2018 IPR007551 Protein of unknown function DUF520 APY29_RS03755 b9aeafc107c7f3451c0f671de6317a9f 161 SUPERFAMILY SSF89963 90 161 1.28E-26 T 28-03-2018 IPR007551 Protein of unknown function DUF520 APY29_RS03755 b9aeafc107c7f3451c0f671de6317a9f 161 SUPERFAMILY SSF89963 2 85 4.97E-29 T 28-03-2018 IPR007551 Protein of unknown function DUF520 APY29_RS03755 b9aeafc107c7f3451c0f671de6317a9f 161 Gene3D G3DSA:3.30.70.990 10 95 5.2E-30 T 28-03-2018 IPR035570 UPF0234 N-terminal domain APY29_RS03755 b9aeafc107c7f3451c0f671de6317a9f 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 1.5E-61 T 28-03-2018 IPR007551 Protein of unknown function DUF520 APY29_RS03035 405330a33308dc9dc4744c798b69bc80 830 Pfam PF01751 Toprim domain 5 117 3.1E-26 T 28-03-2018 IPR006171 TOPRIM domain APY29_RS03035 405330a33308dc9dc4744c798b69bc80 830 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 618 5.2E-224 T 28-03-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 APY29_RS03035 405330a33308dc9dc4744c798b69bc80 830 SMART SM00436 108 196 8.1E-47 T 28-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 APY29_RS03035 405330a33308dc9dc4744c798b69bc80 830 Gene3D G3DSA:2.70.20.10 336 463 1.2E-40 T 28-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APY29_RS03035 405330a33308dc9dc4744c798b69bc80 830 Pfam PF01131 DNA topoisomerase 135 562 9.2E-130 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APY29_RS03035 405330a33308dc9dc4744c798b69bc80 830 Gene3D G3DSA:1.10.460.10 464 585 1.1E-25 T 28-03-2018 APY29_RS03035 405330a33308dc9dc4744c798b69bc80 830 Gene3D G3DSA:1.10.460.10 139 331 1.3E-47 T 28-03-2018 APY29_RS03035 405330a33308dc9dc4744c798b69bc80 830 Gene3D G3DSA:3.40.50.140 2 133 4.7E-40 T 28-03-2018 APY29_RS03035 405330a33308dc9dc4744c798b69bc80 830 SMART SM00493 3 103 3.3E-32 T 28-03-2018 IPR006171 TOPRIM domain APY29_RS03035 405330a33308dc9dc4744c798b69bc80 830 Pfam PF13368 Topoisomerase C-terminal repeat 714 759 5.7E-13 T 28-03-2018 IPR025589 Topoisomerase C-terminal repeat APY29_RS03035 405330a33308dc9dc4744c798b69bc80 830 Pfam PF13368 Topoisomerase C-terminal repeat 594 654 2.6E-14 T 28-03-2018 IPR025589 Topoisomerase C-terminal repeat APY29_RS03035 405330a33308dc9dc4744c798b69bc80 830 Pfam PF13368 Topoisomerase C-terminal repeat 657 703 5.6E-12 T 28-03-2018 IPR025589 Topoisomerase C-terminal repeat APY29_RS03035 405330a33308dc9dc4744c798b69bc80 830 SUPERFAMILY SSF56712 3 576 4.97E-187 T 28-03-2018 IPR023405 DNA topoisomerase, type IA, core domain APY29_RS03035 405330a33308dc9dc4744c798b69bc80 830 SMART SM00437 252 525 9.9E-114 T 28-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 APY29_RS03035 405330a33308dc9dc4744c798b69bc80 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 488 502 6.8E-37 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APY29_RS03035 405330a33308dc9dc4744c798b69bc80 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 303 312 6.8E-37 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APY29_RS03035 405330a33308dc9dc4744c798b69bc80 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 166 184 6.8E-37 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APY29_RS03035 405330a33308dc9dc4744c798b69bc80 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 6.8E-37 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APY29_RS03035 405330a33308dc9dc4744c798b69bc80 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 381 397 6.8E-37 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APY29_RS03035 405330a33308dc9dc4744c798b69bc80 830 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 289 312 - T 28-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 APY29_RS03035 405330a33308dc9dc4744c798b69bc80 830 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 681 54.025 T 28-03-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 APY29_RS15760 5dca4e36259d36a6ad62695410b31423 438 Gene3D G3DSA:3.40.50.1820 100 415 8.3E-20 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS15760 5dca4e36259d36a6ad62695410b31423 438 SUPERFAMILY SSF53474 109 412 6.64E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS15760 5dca4e36259d36a6ad62695410b31423 438 Pfam PF06850 PHB de-polymerase C-terminus 214 415 1.9E-100 T 28-03-2018 IPR009656 PHB de-polymerase, C-terminal APY29_RS15760 5dca4e36259d36a6ad62695410b31423 438 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 5 415 9.8E-209 T 28-03-2018 IPR010915 Polyhydroxyalkanoate depolymerase APY29_RS15760 5dca4e36259d36a6ad62695410b31423 438 PIRSF PIRSF020818 1 427 4.3E-201 T 28-03-2018 IPR010915 Polyhydroxyalkanoate depolymerase APY29_RS08030 b211ff5c71d6e7c22f28e5d896e1c846 181 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 129 135 - T 28-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 APY29_RS08030 b211ff5c71d6e7c22f28e5d896e1c846 181 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 80 159 2.0E-31 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 APY29_RS08030 b211ff5c71d6e7c22f28e5d896e1c846 181 Gene3D G3DSA:1.10.10.10 75 161 3.5E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS08030 b211ff5c71d6e7c22f28e5d896e1c846 181 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 3 75 6.7E-7 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 APY29_RS08030 b211ff5c71d6e7c22f28e5d896e1c846 181 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 8 159 42.006 T 28-03-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 APY29_RS08030 b211ff5c71d6e7c22f28e5d896e1c846 181 Gene3D G3DSA:3.30.160.70 3 74 2.5E-17 T 28-03-2018 APY29_RS08030 b211ff5c71d6e7c22f28e5d896e1c846 181 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 79 158 1.4E-33 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 APY29_RS08030 b211ff5c71d6e7c22f28e5d896e1c846 181 SUPERFAMILY SSF46767 78 160 2.35E-31 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 APY29_RS08030 b211ff5c71d6e7c22f28e5d896e1c846 181 SUPERFAMILY SSF53155 4 82 7.06E-19 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 APY29_RS12500 203cf9d1231ae7cfb561922cd60b481e 286 Pfam PF13464 Domain of unknown function (DUF4115) 202 274 3.2E-17 T 28-03-2018 IPR025194 Domain of unknown function DUF4115 APY29_RS12500 203cf9d1231ae7cfb561922cd60b481e 286 Pfam PF13413 Helix-turn-helix domain 20 79 1.2E-21 T 28-03-2018 APY29_RS12500 203cf9d1231ae7cfb561922cd60b481e 286 Gene3D G3DSA:1.10.260.40 12 86 5.9E-9 T 28-03-2018 APY29_RS09775 cb8380769ff67ccf62ddef32aadb5120 461 SUPERFAMILY SSF55931 123 458 2.55E-106 T 28-03-2018 APY29_RS09775 cb8380769ff67ccf62ddef32aadb5120 461 Pfam PF00120 Glutamine synthetase, catalytic domain 124 455 8.5E-105 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APY29_RS09775 cb8380769ff67ccf62ddef32aadb5120 461 Gene3D G3DSA:3.30.590.10 123 460 2.0E-95 T 28-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 APY29_RS09775 cb8380769ff67ccf62ddef32aadb5120 461 Gene3D G3DSA:3.10.20.70 13 122 1.4E-24 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APY29_RS09775 cb8380769ff67ccf62ddef32aadb5120 461 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 28-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 APY29_RS09775 cb8380769ff67ccf62ddef32aadb5120 461 SMART SM01230 123 380 1.4E-103 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APY29_RS09775 cb8380769ff67ccf62ddef32aadb5120 461 SUPERFAMILY SSF54368 19 122 5.49E-24 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APY29_RS11250 4f693ba15015444b658981e600cc32b0 570 Pfam PF00580 UvrD/REP helicase N-terminal domain 16 114 4.3E-5 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 APY29_RS11250 4f693ba15015444b658981e600cc32b0 570 Pfam PF00580 UvrD/REP helicase N-terminal domain 135 217 2.4E-13 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 APY29_RS11250 4f693ba15015444b658981e600cc32b0 570 Gene3D G3DSA:3.40.50.300 233 567 1.3E-12 T 28-03-2018 APY29_RS11250 4f693ba15015444b658981e600cc32b0 570 Pfam PF13361 UvrD-like helicase C-terminal domain 487 559 1.2E-6 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APY29_RS11250 4f693ba15015444b658981e600cc32b0 570 SUPERFAMILY SSF52540 8 330 7.53E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11250 4f693ba15015444b658981e600cc32b0 570 SUPERFAMILY SSF52540 423 565 7.53E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11250 4f693ba15015444b658981e600cc32b0 570 Gene3D G3DSA:3.40.50.300 11 230 1.1E-30 T 28-03-2018 APY29_RS13050 1fd116e55433941106d408aa05b5df53 1013 Gene3D G3DSA:2.40.170.20 173 1013 4.1E-63 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS13050 1fd116e55433941106d408aa05b5df53 1013 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 32 1013 1.0E-259 T 28-03-2018 IPR010104 Bacterial TonB-dependent receptor APY29_RS13050 1fd116e55433941106d408aa05b5df53 1013 Gene3D G3DSA:2.170.130.10 24 166 8.8E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS13050 1fd116e55433941106d408aa05b5df53 1013 SUPERFAMILY SSF56935 722 760 1.39E-50 T 28-03-2018 APY29_RS13050 1fd116e55433941106d408aa05b5df53 1013 SUPERFAMILY SSF56935 789 1013 1.39E-50 T 28-03-2018 APY29_RS13050 1fd116e55433941106d408aa05b5df53 1013 SUPERFAMILY SSF56935 400 667 1.39E-50 T 28-03-2018 APY29_RS13050 1fd116e55433941106d408aa05b5df53 1013 Pfam PF00593 TonB dependent receptor 457 1012 1.6E-40 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS13050 1fd116e55433941106d408aa05b5df53 1013 SUPERFAMILY SSF56935 27 225 2.44E-37 T 28-03-2018 APY29_RS13050 1fd116e55433941106d408aa05b5df53 1013 SUPERFAMILY SSF56935 286 401 2.44E-37 T 28-03-2018 APY29_RS13050 1fd116e55433941106d408aa05b5df53 1013 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 159 7.7E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 3.8E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.8E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 3.8E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 PRINTS PR00702 Acriflavin resistance protein family signature 537 554 3.8E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 3.8E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.8E-21 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 Gene3D G3DSA:3.30.70.1430 42 129 2.8E-16 T 28-03-2018 APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 SUPERFAMILY SSF82714 182 262 2.35E-13 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 SUPERFAMILY SSF82714 708 793 1.57E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 Gene3D G3DSA:3.30.2090.10 707 795 2.6E-22 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 SUPERFAMILY SSF82693 48 125 6.28E-17 T 28-03-2018 APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 SUPERFAMILY SSF82866 793 1016 5.1E-48 T 28-03-2018 APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 Gene3D G3DSA:3.30.70.1430 552 652 1.5E-14 T 28-03-2018 APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 Gene3D G3DSA:1.20.1640.10 295 504 1.8E-33 T 28-03-2018 APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1017 1.5E-286 T 28-03-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 Gene3D G3DSA:1.20.1640.10 814 1018 1.2E-36 T 28-03-2018 APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 SUPERFAMILY SSF82866 301 490 9.42E-32 T 28-03-2018 APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 SUPERFAMILY SSF82693 551 651 8.37E-11 T 28-03-2018 APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 Gene3D G3DSA:3.30.2090.10 179 266 4.1E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 Pfam PF00873 AcrB/AcrD/AcrF family 6 1015 2.5E-257 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 SUPERFAMILY SSF82693 137 180 2.77E-12 T 28-03-2018 APY29_RS12055 a94738688f6ac04e09293ca335d9c8e8 1028 SUPERFAMILY SSF82693 266 324 2.77E-12 T 28-03-2018 APY29_RS07375 0444356855f1734355b835fb0e126eaf 388 Pfam PF01594 AI-2E family transporter 18 348 1.6E-58 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like APY29_RS03065 8c3ac84bab42fa411ef35c13922d4d42 170 Pfam PF01327 Polypeptide deformylase 5 155 4.5E-53 T 28-03-2018 IPR023635 Peptide deformylase APY29_RS03065 8c3ac84bab42fa411ef35c13922d4d42 170 Hamap MF_00163 Peptide deformylase [def]. 2 165 31.511 T 28-03-2018 IPR023635 Peptide deformylase APY29_RS03065 8c3ac84bab42fa411ef35c13922d4d42 170 PIRSF PIRSF004749 1 170 8.0E-58 T 28-03-2018 IPR023635 Peptide deformylase APY29_RS03065 8c3ac84bab42fa411ef35c13922d4d42 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 162 6.2E-54 T 28-03-2018 IPR023635 Peptide deformylase APY29_RS03065 8c3ac84bab42fa411ef35c13922d4d42 170 PRINTS PR01576 Peptide deformylase signature 123 152 8.0E-39 T 28-03-2018 IPR023635 Peptide deformylase APY29_RS03065 8c3ac84bab42fa411ef35c13922d4d42 170 PRINTS PR01576 Peptide deformylase signature 104 122 8.0E-39 T 28-03-2018 IPR023635 Peptide deformylase APY29_RS03065 8c3ac84bab42fa411ef35c13922d4d42 170 PRINTS PR01576 Peptide deformylase signature 36 65 8.0E-39 T 28-03-2018 IPR023635 Peptide deformylase APY29_RS03065 8c3ac84bab42fa411ef35c13922d4d42 170 PRINTS PR01576 Peptide deformylase signature 92 103 8.0E-39 T 28-03-2018 IPR023635 Peptide deformylase APY29_RS03065 8c3ac84bab42fa411ef35c13922d4d42 170 Gene3D G3DSA:3.90.45.10 1 170 1.6E-64 T 28-03-2018 IPR023635 Peptide deformylase APY29_RS03065 8c3ac84bab42fa411ef35c13922d4d42 170 SUPERFAMILY SSF56420 2 167 1.7E-63 T 28-03-2018 IPR023635 Peptide deformylase APY29_RS22885 6ff86bb91eb87de8bea5435bf2e11252 184 SUPERFAMILY SSF55729 8 160 5.23E-36 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS22885 6ff86bb91eb87de8bea5435bf2e11252 184 Pfam PF13302 Acetyltransferase (GNAT) domain 15 155 2.0E-25 T 28-03-2018 IPR000182 GNAT domain GO:0008080 APY29_RS22885 6ff86bb91eb87de8bea5435bf2e11252 184 Gene3D G3DSA:3.40.630.30 2 173 5.8E-26 T 28-03-2018 APY29_RS19980 a3c539364e765f9d0f20312e86d4849d 250 SUPERFAMILY SSF81624 2 120 1.48E-11 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APY29_RS19980 a3c539364e765f9d0f20312e86d4849d 250 SUPERFAMILY SSF46946 116 208 1.12E-17 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 APY29_RS19980 a3c539364e765f9d0f20312e86d4849d 250 SMART SM01232 113 196 1.0E-10 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APY29_RS19980 a3c539364e765f9d0f20312e86d4849d 250 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 141 187 7.3E-11 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APY29_RS19980 a3c539364e765f9d0f20312e86d4849d 250 Gene3D G3DSA:3.20.190.10 3 109 4.4E-17 T 28-03-2018 APY29_RS19980 a3c539364e765f9d0f20312e86d4849d 250 SMART SM00898 2 99 9.1E-7 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APY29_RS19980 a3c539364e765f9d0f20312e86d4849d 250 Gene3D G3DSA:1.10.8.50 111 249 1.6E-25 T 28-03-2018 APY29_RS19980 a3c539364e765f9d0f20312e86d4849d 250 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 96 7.9E-8 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APY29_RS01730 e609996281c66f125f0f7b3cdccc69e7 603 Pfam PF00999 Sodium/hydrogen exchanger family 10 371 1.7E-61 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APY29_RS01730 e609996281c66f125f0f7b3cdccc69e7 603 SUPERFAMILY SSF51735 402 535 6.36E-31 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS01730 e609996281c66f125f0f7b3cdccc69e7 603 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 282 2.5E-76 T 28-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 APY29_RS01730 e609996281c66f125f0f7b3cdccc69e7 603 Gene3D G3DSA:1.20.91.10 227 308 4.1E-14 T 28-03-2018 APY29_RS01730 e609996281c66f125f0f7b3cdccc69e7 603 Pfam PF02254 TrkA-N domain 404 513 3.7E-27 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APY29_RS01730 e609996281c66f125f0f7b3cdccc69e7 603 Gene3D G3DSA:3.40.50.720 399 516 6.8E-22 T 28-03-2018 APY29_RS10315 18824b6c23873f81d17e746ac217b39f 346 Gene3D G3DSA:1.10.287.500 189 304 0.0012 T 28-03-2018 APY29_RS10315 18824b6c23873f81d17e746ac217b39f 346 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 223 345 28.523 T 28-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 APY29_RS10315 18824b6c23873f81d17e746ac217b39f 346 SUPERFAMILY SSF109635 213 305 6.15E-29 T 28-03-2018 APY29_RS10315 18824b6c23873f81d17e746ac217b39f 346 SUPERFAMILY SSF57716 306 344 3.85E-6 T 28-03-2018 APY29_RS10315 18824b6c23873f81d17e746ac217b39f 346 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 304 336 1.2E-7 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 APY29_RS10315 18824b6c23873f81d17e746ac217b39f 346 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 227 336 1.4E-42 T 28-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 APY29_RS18945 e1a0036c0cf87671877e44cd1f3d3780 475 Gene3D G3DSA:3.20.20.80 31 395 1.2E-42 T 28-03-2018 APY29_RS18945 e1a0036c0cf87671877e44cd1f3d3780 475 Gene3D G3DSA:2.60.40.1180 396 475 7.5E-10 T 28-03-2018 APY29_RS18945 e1a0036c0cf87671877e44cd1f3d3780 475 SMART SM00642 36 384 2.1E-28 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS18945 e1a0036c0cf87671877e44cd1f3d3780 475 SUPERFAMILY SSF51011 395 473 2.09E-6 T 28-03-2018 APY29_RS18945 e1a0036c0cf87671877e44cd1f3d3780 475 Pfam PF00128 Alpha amylase, catalytic domain 60 266 1.0E-10 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS18945 e1a0036c0cf87671877e44cd1f3d3780 475 PRINTS PR00110 Alpha-amylase signature 110 121 2.9E-15 T 28-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 APY29_RS18945 e1a0036c0cf87671877e44cd1f3d3780 475 PRINTS PR00110 Alpha-amylase signature 318 330 2.9E-15 T 28-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 APY29_RS18945 e1a0036c0cf87671877e44cd1f3d3780 475 PRINTS PR00110 Alpha-amylase signature 223 234 2.9E-15 T 28-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 APY29_RS18945 e1a0036c0cf87671877e44cd1f3d3780 475 PRINTS PR00110 Alpha-amylase signature 252 270 2.9E-15 T 28-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 APY29_RS18945 e1a0036c0cf87671877e44cd1f3d3780 475 PRINTS PR00110 Alpha-amylase signature 77 94 2.9E-15 T 28-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 APY29_RS18945 e1a0036c0cf87671877e44cd1f3d3780 475 SUPERFAMILY SSF51445 31 392 7.29E-60 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS02100 53611884fe3d31da65c74fc3ad6274b6 242 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 6 234 2.6E-20 T 28-03-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 APY29_RS02100 53611884fe3d31da65c74fc3ad6274b6 242 SUPERFAMILY SSF53067 113 236 1.17E-22 T 28-03-2018 APY29_RS02100 53611884fe3d31da65c74fc3ad6274b6 242 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 240 14.375 T 28-03-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 APY29_RS02100 53611884fe3d31da65c74fc3ad6274b6 242 SUPERFAMILY SSF53067 5 110 3.43E-20 T 28-03-2018 APY29_RS02100 53611884fe3d31da65c74fc3ad6274b6 242 Gene3D G3DSA:3.30.420.40 80 241 2.6E-34 T 28-03-2018 APY29_RS02100 53611884fe3d31da65c74fc3ad6274b6 242 Pfam PF03309 Type III pantothenate kinase 5 192 1.1E-35 T 28-03-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 APY29_RS19830 691a7e9511414b6b052b66f3d1dba681 132 Pfam PF04304 Protein of unknown function (DUF454) 8 122 9.3E-36 T 28-03-2018 IPR007401 Protein of unknown function DUF454 APY29_RS19830 691a7e9511414b6b052b66f3d1dba681 132 PIRSF PIRSF016789 7 127 7.3E-32 T 28-03-2018 IPR007401 Protein of unknown function DUF454 APY29_RS05455 d2115c328d75a55cc2f68c817b5f8ec3 432 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 309 386 4.7E-20 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 APY29_RS05455 d2115c328d75a55cc2f68c817b5f8ec3 432 Pfam PF05569 BlaR1 peptidase M56 7 256 6.9E-75 T 28-03-2018 IPR008756 Peptidase M56 APY29_RS05455 d2115c328d75a55cc2f68c817b5f8ec3 432 SUPERFAMILY SSF74653 309 384 6.54E-20 T 28-03-2018 APY29_RS05455 d2115c328d75a55cc2f68c817b5f8ec3 432 Gene3D G3DSA:3.30.1150.10 288 392 1.5E-19 T 28-03-2018 APY29_RS05455 d2115c328d75a55cc2f68c817b5f8ec3 432 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 310 386 1.0E-17 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 APY29_RS13945 5b7bba18fd19d2a7dacffee07682d630 233 SUPERFAMILY SSF51182 1 232 1.92E-73 T 28-03-2018 IPR011051 RmlC-like cupin domain APY29_RS13945 5b7bba18fd19d2a7dacffee07682d630 233 Gene3D G3DSA:2.60.120.10 132 233 1.2E-29 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS13945 5b7bba18fd19d2a7dacffee07682d630 233 Gene3D G3DSA:2.60.120.10 12 131 1.5E-49 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS13945 5b7bba18fd19d2a7dacffee07682d630 233 PIRSF PIRSF006232 1 230 2.7E-53 T 28-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 APY29_RS13945 5b7bba18fd19d2a7dacffee07682d630 233 Pfam PF02678 Pirin 7 119 9.3E-33 T 28-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 APY29_RS19725 b351cf0f564e60b52a6156e63e1c9832 368 SUPERFAMILY SSF50129 1 180 3.35E-66 T 28-03-2018 IPR011032 GroES-like APY29_RS19725 b351cf0f564e60b52a6156e63e1c9832 368 Pfam PF00107 Zinc-binding dehydrogenase 196 321 1.6E-22 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APY29_RS19725 b351cf0f564e60b52a6156e63e1c9832 368 SUPERFAMILY SSF50129 317 367 1.98E-5 T 28-03-2018 IPR011032 GroES-like APY29_RS19725 b351cf0f564e60b52a6156e63e1c9832 368 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 368 1.5E-180 T 28-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 APY29_RS19725 b351cf0f564e60b52a6156e63e1c9832 368 Gene3D G3DSA:3.40.50.720 187 309 6.5E-24 T 28-03-2018 APY29_RS19725 b351cf0f564e60b52a6156e63e1c9832 368 SUPERFAMILY SSF51735 159 332 4.43E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS19725 b351cf0f564e60b52a6156e63e1c9832 368 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 148 5.7E-21 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APY29_RS19725 b351cf0f564e60b52a6156e63e1c9832 368 SMART SM00829 10 366 7.3E-4 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APY29_RS19725 b351cf0f564e60b52a6156e63e1c9832 368 Gene3D G3DSA:3.90.180.10 1 186 3.9E-57 T 28-03-2018 APY29_RS02920 78541ccffd72c66c7e80968947c8e481 113 PRINTS PR00421 Thioredoxin family signature 24 32 4.1E-8 T 28-03-2018 APY29_RS02920 78541ccffd72c66c7e80968947c8e481 113 PRINTS PR00421 Thioredoxin family signature 32 41 4.1E-8 T 28-03-2018 APY29_RS02920 78541ccffd72c66c7e80968947c8e481 113 PRINTS PR00421 Thioredoxin family signature 72 83 4.1E-8 T 28-03-2018 APY29_RS02920 78541ccffd72c66c7e80968947c8e481 113 Pfam PF00085 Thioredoxin 5 106 3.5E-32 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 APY29_RS02920 78541ccffd72c66c7e80968947c8e481 113 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 APY29_RS02920 78541ccffd72c66c7e80968947c8e481 113 Gene3D G3DSA:3.40.30.10 1 113 4.9E-36 T 28-03-2018 APY29_RS02920 78541ccffd72c66c7e80968947c8e481 113 SUPERFAMILY SSF52833 3 109 3.03E-40 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS02920 78541ccffd72c66c7e80968947c8e481 113 TIGRFAM TIGR01068 thioredoxin: thioredoxin 10 107 7.4E-38 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APY29_RS02920 78541ccffd72c66c7e80968947c8e481 113 PIRSF PIRSF000077 2 108 7.4E-42 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APY29_RS11190 26287400397d0ec8e12e32196a56274f 619 SUPERFAMILY SSF47781 519 605 2.22E-19 T 28-03-2018 IPR010994 RuvA domain 2-like APY29_RS11190 26287400397d0ec8e12e32196a56274f 619 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 384 538 8.4E-50 T 28-03-2018 IPR001162 UvrC family homology region APY29_RS11190 26287400397d0ec8e12e32196a56274f 619 SUPERFAMILY SSF46600 193 246 4.58E-12 T 28-03-2018 IPR001943 UVR domain GO:0005515 APY29_RS11190 26287400397d0ec8e12e32196a56274f 619 Gene3D G3DSA:3.40.1440.10 10 105 4.6E-21 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily APY29_RS11190 26287400397d0ec8e12e32196a56274f 619 Pfam PF02151 UvrB/uvrC motif 217 240 9.9E-8 T 28-03-2018 IPR001943 UVR domain GO:0005515 APY29_RS11190 26287400397d0ec8e12e32196a56274f 619 SUPERFAMILY SSF82771 21 104 2.09E-17 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily APY29_RS11190 26287400397d0ec8e12e32196a56274f 619 Gene3D G3DSA:1.10.150.20 544 606 8.3E-12 T 28-03-2018 APY29_RS11190 26287400397d0ec8e12e32196a56274f 619 Gene3D G3DSA:4.10.860.10 186 244 4.2E-13 T 28-03-2018 IPR001943 UVR domain GO:0005515 APY29_RS11190 26287400397d0ec8e12e32196a56274f 619 Pfam PF01541 GIY-YIG catalytic domain 23 97 5.8E-7 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily APY29_RS11190 26287400397d0ec8e12e32196a56274f 619 SMART SM00465 21 102 1.8E-15 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily APY29_RS11190 26287400397d0ec8e12e32196a56274f 619 SMART SM00278 552 571 1.2 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APY29_RS11190 26287400397d0ec8e12e32196a56274f 619 SMART SM00278 584 603 230.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APY29_RS11190 26287400397d0ec8e12e32196a56274f 619 Hamap MF_00203 UvrABC system protein C [uvrC]. 8 603 26.907 T 28-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 APY29_RS11190 26287400397d0ec8e12e32196a56274f 619 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 16 584 2.7E-177 T 28-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 APY29_RS09430 53694ff3b2164a9c7f11962f7940cde6 1452 Gene3D G3DSA:3.40.1850.10 1051 1137 3.0E-7 T 28-03-2018 APY29_RS09430 53694ff3b2164a9c7f11962f7940cde6 1452 SUPERFAMILY SSF49785 876 1026 4.54E-10 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS09430 53694ff3b2164a9c7f11962f7940cde6 1452 Gene3D G3DSA:1.50.10.10 378 729 7.8E-12 T 28-03-2018 APY29_RS09430 53694ff3b2164a9c7f11962f7940cde6 1452 Pfam PF07532 Bacterial Ig-like domain (group 4) 1301 1353 6.7E-9 T 28-03-2018 IPR011081 Bacterial Ig-related KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 APY29_RS09430 53694ff3b2164a9c7f11962f7940cde6 1452 Pfam PF07532 Bacterial Ig-like domain (group 4) 1380 1432 7.0E-11 T 28-03-2018 IPR011081 Bacterial Ig-related KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 APY29_RS09430 53694ff3b2164a9c7f11962f7940cde6 1452 Gene3D G3DSA:2.60.120.260 869 1029 5.1E-29 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS09430 53694ff3b2164a9c7f11962f7940cde6 1452 Gene3D G3DSA:2.60.120.260 1138 1292 2.0E-19 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS09430 53694ff3b2164a9c7f11962f7940cde6 1452 Pfam PF00754 F5/8 type C domain 889 1015 2.1E-7 T 28-03-2018 IPR000421 Coagulation factor 5/8 C-terminal domain APY29_RS09430 53694ff3b2164a9c7f11962f7940cde6 1452 SUPERFAMILY SSF48208 305 786 4.76E-17 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 APY29_RS09075 7cd4e3e58b5ced7141f92bbb3809a423 693 SUPERFAMILY SSF51445 292 587 4.28E-9 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS09075 7cd4e3e58b5ced7141f92bbb3809a423 693 Gene3D G3DSA:3.20.20.70 285 588 4.4E-96 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS09075 7cd4e3e58b5ced7141f92bbb3809a423 693 Gene3D G3DSA:2.70.98.10 39 284 1.2E-80 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 APY29_RS09075 7cd4e3e58b5ced7141f92bbb3809a423 693 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 42 288 2.4E-68 T 28-03-2018 IPR029486 Glycosyl-hydrolase 97, N-terminal domain APY29_RS09075 7cd4e3e58b5ced7141f92bbb3809a423 693 Pfam PF10566 Glycoside hydrolase 97 293 583 1.9E-113 T 28-03-2018 IPR019563 Glycosyl-hydrolase 97, catalytic domain APY29_RS09075 7cd4e3e58b5ced7141f92bbb3809a423 693 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 586 686 9.3E-29 T 28-03-2018 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain APY29_RS09075 7cd4e3e58b5ced7141f92bbb3809a423 693 Gene3D G3DSA:2.60.40.1180 589 693 1.3E-29 T 28-03-2018 APY29_RS03220 18f37fa042098cfc5d3d1b2481cedd11 256 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 2.8E-18 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 APY29_RS03220 18f37fa042098cfc5d3d1b2481cedd11 256 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 2.8E-18 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 APY29_RS03220 18f37fa042098cfc5d3d1b2481cedd11 256 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 2.8E-18 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 APY29_RS03220 18f37fa042098cfc5d3d1b2481cedd11 256 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 2.8E-18 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 APY29_RS03220 18f37fa042098cfc5d3d1b2481cedd11 256 Hamap MF_01974 Methionine aminopeptidase [map]. 1 248 36.161 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 APY29_RS03220 18f37fa042098cfc5d3d1b2481cedd11 256 SUPERFAMILY SSF55920 2 249 4.97E-81 T 28-03-2018 IPR000994 Peptidase M24 APY29_RS03220 18f37fa042098cfc5d3d1b2481cedd11 256 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 APY29_RS03220 18f37fa042098cfc5d3d1b2481cedd11 256 Pfam PF00557 Metallopeptidase family M24 10 238 2.3E-47 T 28-03-2018 IPR000994 Peptidase M24 APY29_RS03220 18f37fa042098cfc5d3d1b2481cedd11 256 Gene3D G3DSA:3.90.230.10 1 255 8.2E-75 T 28-03-2018 APY29_RS03220 18f37fa042098cfc5d3d1b2481cedd11 256 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 1.0E-83 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 APY29_RS20750 cb242398a92a2b9c5b1cfe5be173bcbf 109 Gene3D G3DSA:1.10.287.110 31 109 2.8E-17 T 28-03-2018 IPR001623 DnaJ domain APY29_RS20750 cb242398a92a2b9c5b1cfe5be173bcbf 109 SUPERFAMILY SSF46565 10 109 8.24E-22 T 28-03-2018 IPR001623 DnaJ domain APY29_RS20750 cb242398a92a2b9c5b1cfe5be173bcbf 109 PRINTS PR00625 DnaJ domain signature 88 108 3.4E-10 T 28-03-2018 IPR001623 DnaJ domain APY29_RS20750 cb242398a92a2b9c5b1cfe5be173bcbf 109 PRINTS PR00625 DnaJ domain signature 66 81 3.4E-10 T 28-03-2018 IPR001623 DnaJ domain APY29_RS20750 cb242398a92a2b9c5b1cfe5be173bcbf 109 PRINTS PR00625 DnaJ domain signature 48 66 3.4E-10 T 28-03-2018 IPR001623 DnaJ domain APY29_RS20750 cb242398a92a2b9c5b1cfe5be173bcbf 109 Pfam PF00226 DnaJ domain 46 109 2.6E-13 T 28-03-2018 IPR001623 DnaJ domain APY29_RS20750 cb242398a92a2b9c5b1cfe5be173bcbf 109 SMART SM00271 45 108 2.7E-15 T 28-03-2018 IPR001623 DnaJ domain APY29_RS10040 dad3598b722e79c386f7f124176ac0be 355 Pfam PF13484 4Fe-4S double cluster binding domain 196 260 2.8E-19 T 28-03-2018 APY29_RS10040 dad3598b722e79c386f7f124176ac0be 355 Gene3D G3DSA:3.30.70.20 204 303 1.2E-9 T 28-03-2018 APY29_RS10040 dad3598b722e79c386f7f124176ac0be 355 SUPERFAMILY SSF54862 174 324 4.6E-18 T 28-03-2018 APY29_RS10040 dad3598b722e79c386f7f124176ac0be 355 Gene3D G3DSA:3.30.70.20 60 203 9.1E-4 T 28-03-2018 APY29_RS10040 dad3598b722e79c386f7f124176ac0be 355 Pfam PF08331 Domain of unknown function (DUF1730) 65 144 8.2E-23 T 28-03-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 APY29_RS10040 dad3598b722e79c386f7f124176ac0be 355 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 197 208 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APY29_RS10040 dad3598b722e79c386f7f124176ac0be 355 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 17 353 1.7E-148 T 28-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 APY29_RS10040 dad3598b722e79c386f7f124176ac0be 355 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 10 319 49.328 T 28-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 APY29_RS11030 ecef978dcd9e5e69e2ff2079b6a2434b 371 Gene3D G3DSA:2.40.50.100 37 101 1.2E-6 T 28-03-2018 APY29_RS11030 ecef978dcd9e5e69e2ff2079b6a2434b 371 Pfam PF00529 HlyD membrane-fusion protein of T1SS 101 334 1.9E-7 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 APY29_RS11030 ecef978dcd9e5e69e2ff2079b6a2434b 371 Gene3D G3DSA:2.40.50.100 158 351 3.9E-8 T 28-03-2018 APY29_RS11030 ecef978dcd9e5e69e2ff2079b6a2434b 371 Gene3D G3DSA:1.10.287.470 102 157 2.7E-7 T 28-03-2018 APY29_RS11030 ecef978dcd9e5e69e2ff2079b6a2434b 371 SUPERFAMILY SSF111369 62 274 2.35E-37 T 28-03-2018 APY29_RS11030 ecef978dcd9e5e69e2ff2079b6a2434b 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 348 1.6E-93 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 APY29_RS11030 ecef978dcd9e5e69e2ff2079b6a2434b 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 268 2.0E-28 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APY29_RS22710 57908ce4c32c71a05cf238a42c92dc39 394 SUPERFAMILY SSF51445 36 386 1.08E-101 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS22710 57908ce4c32c71a05cf238a42c92dc39 394 Gene3D G3DSA:3.20.20.80 29 391 2.2E-63 T 28-03-2018 APY29_RS22710 57908ce4c32c71a05cf238a42c92dc39 394 PRINTS PR00134 Glycosyl hydrolase family 10 signature 112 124 2.0E-15 T 28-03-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 APY29_RS22710 57908ce4c32c71a05cf238a42c92dc39 394 PRINTS PR00134 Glycosyl hydrolase family 10 signature 206 217 2.0E-15 T 28-03-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 APY29_RS22710 57908ce4c32c71a05cf238a42c92dc39 394 PRINTS PR00134 Glycosyl hydrolase family 10 signature 234 246 2.0E-15 T 28-03-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 APY29_RS22710 57908ce4c32c71a05cf238a42c92dc39 394 PRINTS PR00134 Glycosyl hydrolase family 10 signature 160 171 2.0E-15 T 28-03-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 APY29_RS22710 57908ce4c32c71a05cf238a42c92dc39 394 SMART SM00633 81 388 2.7E-91 T 28-03-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 APY29_RS22710 57908ce4c32c71a05cf238a42c92dc39 394 Pfam PF00331 Glycosyl hydrolase family 10 37 385 7.1E-98 T 28-03-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 APY29_RS22710 57908ce4c32c71a05cf238a42c92dc39 394 ProSitePatterns PS00591 Glycosyl hydrolases family 10 (GH10) active site. 268 278 - T 28-03-2018 IPR031158 Glycosyl hydrolases family 10, active site MetaCyc: PWY-6784 APY29_RS11965 0b3cfd7e07bd920dfbfe7a0014273aa0 152 Pfam PF12472 Phage related protein 62 113 2.2E-8 T 28-03-2018 IPR021096 Vibrio phage VSK, Orf152 APY29_RS11965 0b3cfd7e07bd920dfbfe7a0014273aa0 152 Gene3D G3DSA:1.10.260.40 4 58 4.3E-7 T 28-03-2018 APY29_RS12155 d133ba0d0e7cd7a526c7a93e5c77bce6 330 Gene3D G3DSA:3.60.10.10 7 262 1.9E-43 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS12155 d133ba0d0e7cd7a526c7a93e5c77bce6 330 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 32 41 - T 28-03-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 APY29_RS12155 d133ba0d0e7cd7a526c7a93e5c77bce6 330 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 9 253 3.3E-14 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS12155 d133ba0d0e7cd7a526c7a93e5c77bce6 330 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 7 259 2.8E-69 T 28-03-2018 APY29_RS12155 d133ba0d0e7cd7a526c7a93e5c77bce6 330 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 7 260 2.1E-66 T 28-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APY29_RS12155 d133ba0d0e7cd7a526c7a93e5c77bce6 330 SUPERFAMILY SSF56219 7 261 1.44E-72 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS06410 62917020709b4c5cac01391fc0c34cfc 300 SUPERFAMILY SSF53850 94 293 1.56E-21 T 28-03-2018 APY29_RS06410 62917020709b4c5cac01391fc0c34cfc 300 Gene3D G3DSA:1.10.10.10 1 85 2.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS06410 62917020709b4c5cac01391fc0c34cfc 300 SUPERFAMILY SSF46785 6 113 1.27E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS06410 62917020709b4c5cac01391fc0c34cfc 300 Gene3D G3DSA:3.40.190.10 95 196 1.5E-40 T 28-03-2018 APY29_RS06410 62917020709b4c5cac01391fc0c34cfc 300 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 295 6.2E-114 T 28-03-2018 IPR017685 HTH-type transcriptional regulator ArgP APY29_RS06410 62917020709b4c5cac01391fc0c34cfc 300 Pfam PF03466 LysR substrate binding domain 93 292 8.3E-15 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS06410 62917020709b4c5cac01391fc0c34cfc 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 6.4E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS03650 0b47da6e9d006742dbe2329acb4a5ca2 154 Gene3D G3DSA:2.170.150.20 10 153 3.4E-51 T 28-03-2018 APY29_RS03650 0b47da6e9d006742dbe2329acb4a5ca2 154 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 10 136 35.334 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 APY29_RS03650 0b47da6e9d006742dbe2329acb4a5ca2 154 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 16 136 5.2E-45 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 APY29_RS03650 0b47da6e9d006742dbe2329acb4a5ca2 154 Pfam PF01641 SelR domain 20 134 1.5E-46 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 APY29_RS03650 0b47da6e9d006742dbe2329acb4a5ca2 154 SUPERFAMILY SSF51316 15 138 1.67E-52 T 28-03-2018 IPR011057 Mss4-like APY29_RS07425 afc253d510eeb39c126a477fe1164e37 324 SUPERFAMILY SSF143631 13 321 5.1E-91 T 28-03-2018 IPR003374 ApbE-like domain APY29_RS07425 afc253d510eeb39c126a477fe1164e37 324 Pfam PF02424 ApbE family 19 298 9.5E-78 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 APY29_RS07425 afc253d510eeb39c126a477fe1164e37 324 PIRSF PIRSF006268 3 321 8.2E-77 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 APY29_RS07425 afc253d510eeb39c126a477fe1164e37 324 Gene3D G3DSA:3.10.520.10 21 312 1.8E-49 T 28-03-2018 APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 SUPERFAMILY SSF52172 1000 1120 7.26E-28 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 Gene3D G3DSA:3.30.450.20 311 433 4.8E-31 T 28-03-2018 APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 SMART SM00448 1001 1116 9.2E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 SMART SM00387 859 972 9.0E-41 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 859 971 2.6E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 SMART SM00065 570 727 2.4E-4 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 SMART SM00065 160 308 5.3E-13 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 Pfam PF00512 His Kinase A (phospho-acceptor) domain 747 809 2.9E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 SUPERFAMILY SSF47384 734 812 2.35E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 Gene3D G3DSA:3.40.50.2300 994 1127 3.5E-28 T 28-03-2018 APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 PRINTS PR00344 Bacterial sensor protein C-terminal signature 896 910 2.5E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 PRINTS PR00344 Bacterial sensor protein C-terminal signature 931 949 2.5E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 PRINTS PR00344 Bacterial sensor protein C-terminal signature 956 969 2.5E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 PRINTS PR00344 Bacterial sensor protein C-terminal signature 914 924 2.5E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 Gene3D G3DSA:3.30.450.40 128 310 9.6E-25 T 28-03-2018 IPR029016 GAF domain-like APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 SUPERFAMILY SSF55785 423 550 2.58E-33 T 28-03-2018 IPR000014 PAS domain APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 SUPERFAMILY SSF55785 299 423 2.44E-21 T 28-03-2018 IPR000014 PAS domain APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 Pfam PF00072 Response regulator receiver domain 1003 1116 7.1E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 SMART SM00388 746 812 1.1E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 Pfam PF13185 GAF domain 616 718 8.9E-10 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 SMART SM00091 312 378 0.0048 T 28-03-2018 IPR000014 PAS domain APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 SMART SM00091 438 504 1.0E-11 T 28-03-2018 IPR000014 PAS domain APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 Gene3D G3DSA:3.30.565.10 816 977 1.1E-46 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 SMART SM00086 384 426 1.1E-6 T 28-03-2018 IPR001610 PAC motif APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 SMART SM00086 510 552 1.6E-8 T 28-03-2018 IPR001610 PAC motif APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 SUPERFAMILY SSF55781 595 726 1.4E-16 T 28-03-2018 IPR029016 GAF domain-like APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 SUPERFAMILY SSF55781 151 307 3.05E-23 T 28-03-2018 IPR029016 GAF domain-like APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 SUPERFAMILY SSF55874 801 970 6.16E-48 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 Pfam PF01590 GAF domain 160 293 1.1E-11 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 Gene3D G3DSA:3.30.450.20 434 556 1.2E-38 T 28-03-2018 APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 Gene3D G3DSA:1.10.287.130 743 807 5.7E-17 T 28-03-2018 APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 Gene3D G3DSA:3.30.450.40 557 742 5.8E-20 T 28-03-2018 IPR029016 GAF domain-like APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 309 433 3.6E-9 T 28-03-2018 IPR000014 PAS domain APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 434 557 2.2E-27 T 28-03-2018 IPR000014 PAS domain APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 Pfam PF08447 PAS fold 461 544 9.5E-20 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 APY29_RS10975 68cf86d2b503b4097f67b641b7ce4c63 1127 Pfam PF08448 PAS fold 320 427 7.3E-11 T 28-03-2018 IPR013656 PAS fold-4 APY29_RS02905 962dfe343d74605fe0491d1ab7eca161 315 SUPERFAMILY SSF46785 6 111 4.41E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS02905 962dfe343d74605fe0491d1ab7eca161 315 Gene3D G3DSA:3.40.190.10 89 172 3.8E-12 T 28-03-2018 APY29_RS02905 962dfe343d74605fe0491d1ab7eca161 315 Gene3D G3DSA:3.40.190.10 173 258 5.7E-13 T 28-03-2018 APY29_RS02905 962dfe343d74605fe0491d1ab7eca161 315 SUPERFAMILY SSF53850 91 292 5.97E-33 T 28-03-2018 APY29_RS02905 962dfe343d74605fe0491d1ab7eca161 315 Gene3D G3DSA:1.10.10.10 3 88 1.7E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS02905 962dfe343d74605fe0491d1ab7eca161 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.5E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS02905 962dfe343d74605fe0491d1ab7eca161 315 Pfam PF03466 LysR substrate binding domain 89 286 4.6E-28 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS04215 2b2ec6ea00538ee0018d947250debb73 318 Pfam PF00535 Glycosyl transferase family 2 9 132 1.2E-25 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 APY29_RS04215 2b2ec6ea00538ee0018d947250debb73 318 SUPERFAMILY SSF53448 6 215 2.01E-28 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS04215 2b2ec6ea00538ee0018d947250debb73 318 Gene3D G3DSA:3.90.550.10 8 223 7.5E-25 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS08475 1c56f1c0a2694c47489f7f771fb874e1 1020 Gene3D G3DSA:2.40.170.20 247 1020 1.5E-57 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS08475 1c56f1c0a2694c47489f7f771fb874e1 1020 Gene3D G3DSA:2.170.130.10 126 246 5.8E-18 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS08475 1c56f1c0a2694c47489f7f771fb874e1 1020 SUPERFAMILY SSF49452 29 108 7.85E-6 T 28-03-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 APY29_RS08475 1c56f1c0a2694c47489f7f771fb874e1 1020 Pfam PF00593 TonB dependent receptor 365 1018 5.1E-11 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS08475 1c56f1c0a2694c47489f7f771fb874e1 1020 Pfam PF07715 TonB-dependent Receptor Plug Domain 139 243 1.7E-9 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS08475 1c56f1c0a2694c47489f7f771fb874e1 1020 Gene3D G3DSA:2.60.40.1120 33 125 1.8E-6 T 28-03-2018 APY29_RS08475 1c56f1c0a2694c47489f7f771fb874e1 1020 SUPERFAMILY SSF56935 702 746 1.9E-76 T 28-03-2018 APY29_RS08475 1c56f1c0a2694c47489f7f771fb874e1 1020 SUPERFAMILY SSF56935 118 263 1.9E-76 T 28-03-2018 APY29_RS08475 1c56f1c0a2694c47489f7f771fb874e1 1020 SUPERFAMILY SSF56935 798 913 1.9E-76 T 28-03-2018 APY29_RS08475 1c56f1c0a2694c47489f7f771fb874e1 1020 SUPERFAMILY SSF56935 303 651 1.9E-76 T 28-03-2018 APY29_RS08475 1c56f1c0a2694c47489f7f771fb874e1 1020 SUPERFAMILY SSF56935 941 1020 1.9E-76 T 28-03-2018 APY29_RS10115 ef1d4344e2fd0ce151551ff945776b0c 71 PIRSF PIRSF002599 2 71 2.8E-22 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 APY29_RS10115 ef1d4344e2fd0ce151551ff945776b0c 71 SUPERFAMILY SSF50249 5 70 2.69E-23 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS10115 ef1d4344e2fd0ce151551ff945776b0c 71 PRINTS PR00050 Cold shock protein signature 44 62 2.6E-16 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APY29_RS10115 ef1d4344e2fd0ce151551ff945776b0c 71 PRINTS PR00050 Cold shock protein signature 9 24 2.6E-16 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APY29_RS10115 ef1d4344e2fd0ce151551ff945776b0c 71 PRINTS PR00050 Cold shock protein signature 29 38 2.6E-16 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APY29_RS10115 ef1d4344e2fd0ce151551ff945776b0c 71 SMART SM00357 8 71 5.5E-27 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 APY29_RS10115 ef1d4344e2fd0ce151551ff945776b0c 71 Pfam PF00313 'Cold-shock' DNA-binding domain 8 70 3.3E-27 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APY29_RS10115 ef1d4344e2fd0ce151551ff945776b0c 71 ProSitePatterns PS00352 'Cold-shock' domain signature. 20 38 - T 28-03-2018 IPR019844 Cold-shock conserved site APY29_RS10115 ef1d4344e2fd0ce151551ff945776b0c 71 Gene3D G3DSA:2.40.50.140 1 71 1.7E-26 T 28-03-2018 APY29_RS04915 7466671c52d4fcb47f5a9445405a4dae 370 Gene3D G3DSA:3.40.50.2000 3 177 1.3E-17 T 28-03-2018 APY29_RS04915 7466671c52d4fcb47f5a9445405a4dae 370 Pfam PF00534 Glycosyl transferases group 1 194 341 1.4E-14 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 APY29_RS04915 7466671c52d4fcb47f5a9445405a4dae 370 Gene3D G3DSA:3.40.50.2000 178 360 2.2E-23 T 28-03-2018 APY29_RS04915 7466671c52d4fcb47f5a9445405a4dae 370 SUPERFAMILY SSF53756 1 368 1.44E-53 T 28-03-2018 APY29_RS04915 7466671c52d4fcb47f5a9445405a4dae 370 Pfam PF13439 Glycosyltransferase Family 4 16 169 3.3E-24 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 APY29_RS21890 c824b0b118fb00a2bad6aa178922aeff 675 SUPERFAMILY SSF51246 344 461 2.77E-37 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 APY29_RS21890 c824b0b118fb00a2bad6aa178922aeff 675 Gene3D G3DSA:3.40.50.20 14 136 4.8E-56 T 28-03-2018 APY29_RS21890 c824b0b118fb00a2bad6aa178922aeff 675 Pfam PF00364 Biotin-requiring enzyme 605 669 9.2E-14 T 28-03-2018 IPR000089 Biotin/lipoyl attachment APY29_RS21890 c824b0b118fb00a2bad6aa178922aeff 675 Pfam PF00289 Biotin carboxylase, N-terminal domain 15 123 4.6E-46 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 APY29_RS21890 c824b0b118fb00a2bad6aa178922aeff 675 Pfam PF02785 Biotin carboxylase C-terminal domain 349 457 1.2E-36 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 APY29_RS21890 c824b0b118fb00a2bad6aa178922aeff 675 Gene3D G3DSA:2.40.50.100 620 670 3.9E-11 T 28-03-2018 APY29_RS21890 c824b0b118fb00a2bad6aa178922aeff 675 SUPERFAMILY SSF51230 597 669 2.49E-19 T 28-03-2018 IPR011053 Single hybrid motif APY29_RS21890 c824b0b118fb00a2bad6aa178922aeff 675 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 335 2.5E-73 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APY29_RS21890 c824b0b118fb00a2bad6aa178922aeff 675 Gene3D G3DSA:3.30.470.20 223 459 2.3E-104 T 28-03-2018 APY29_RS21890 c824b0b118fb00a2bad6aa178922aeff 675 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 299 306 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APY29_RS21890 c824b0b118fb00a2bad6aa178922aeff 675 SMART SM00878 349 456 6.7E-54 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 APY29_RS21890 c824b0b118fb00a2bad6aa178922aeff 675 Gene3D G3DSA:2.40.50.100 509 619 3.9E-6 T 28-03-2018 APY29_RS21890 c824b0b118fb00a2bad6aa178922aeff 675 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 627 644 - T 28-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 APY29_RS21890 c824b0b118fb00a2bad6aa178922aeff 675 SUPERFAMILY SSF56059 96 356 8.13E-68 T 28-03-2018 APY29_RS21890 c824b0b118fb00a2bad6aa178922aeff 675 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 166 180 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APY29_RS21890 c824b0b118fb00a2bad6aa178922aeff 675 SUPERFAMILY SSF52440 12 126 2.95E-50 T 28-03-2018 IPR016185 Pre-ATP-grasp domain APY29_RS21890 c824b0b118fb00a2bad6aa178922aeff 675 Gene3D G3DSA:3.30.1490.20 137 222 5.6E-21 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APY29_RS21580 3ac667ad24ae6f3ef29dd923adb10e30 453 ProSitePatterns PS00216 Sugar transport proteins signature 1. 111 127 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APY29_RS21580 3ac667ad24ae6f3ef29dd923adb10e30 453 Gene3D G3DSA:1.20.1250.20 248 441 9.4E-20 T 28-03-2018 APY29_RS21580 3ac667ad24ae6f3ef29dd923adb10e30 453 Gene3D G3DSA:1.20.1250.20 54 244 3.1E-30 T 28-03-2018 APY29_RS21580 3ac667ad24ae6f3ef29dd923adb10e30 453 SUPERFAMILY SSF103473 52 434 4.05E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS21580 3ac667ad24ae6f3ef29dd923adb10e30 453 Pfam PF07690 Major Facilitator Superfamily 61 277 7.5E-21 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS09560 745e06705daa76fa4873077174ae84f1 498 Gene3D G3DSA:3.40.640.10 34 374 3.3E-36 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS09560 745e06705daa76fa4873077174ae84f1 498 SUPERFAMILY SSF53383 77 488 4.11E-55 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS09560 745e06705daa76fa4873077174ae84f1 498 Gene3D G3DSA:3.90.1150.10 375 498 9.5E-16 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS09560 745e06705daa76fa4873077174ae84f1 498 Pfam PF00202 Aminotransferase class-III 84 486 8.9E-36 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APY29_RS08900 a3271171473fa7a692f3401ce639f8c0 1074 SUPERFAMILY SSF49464 33 116 1.65E-11 T 28-03-2018 IPR008969 Carboxypeptidase-like, regulatory domain APY29_RS08900 a3271171473fa7a692f3401ce639f8c0 1074 Gene3D G3DSA:2.40.170.20 251 1074 1.4E-51 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS08900 a3271171473fa7a692f3401ce639f8c0 1074 SUPERFAMILY SSF56935 801 918 1.14E-45 T 28-03-2018 APY29_RS08900 a3271171473fa7a692f3401ce639f8c0 1074 SUPERFAMILY SSF56935 365 737 1.14E-45 T 28-03-2018 APY29_RS08900 a3271171473fa7a692f3401ce639f8c0 1074 SUPERFAMILY SSF56935 144 325 1.14E-45 T 28-03-2018 APY29_RS08900 a3271171473fa7a692f3401ce639f8c0 1074 SUPERFAMILY SSF56935 964 1018 1.14E-45 T 28-03-2018 APY29_RS08900 a3271171473fa7a692f3401ce639f8c0 1074 Pfam PF13620 Carboxypeptidase regulatory-like domain 34 114 5.5E-16 T 28-03-2018 APY29_RS08900 a3271171473fa7a692f3401ce639f8c0 1074 Gene3D G3DSA:2.170.130.10 136 250 6.3E-11 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS08900 a3271171473fa7a692f3401ce639f8c0 1074 Gene3D G3DSA:2.60.40.1120 33 131 3.2E-13 T 28-03-2018 APY29_RS08900 a3271171473fa7a692f3401ce639f8c0 1074 Pfam PF07715 TonB-dependent Receptor Plug Domain 145 244 2.2E-4 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS05740 d18fc004a019263f23f0b9269d7bde4c 113 Gene3D G3DSA:2.102.10.10 4 113 4.1E-19 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APY29_RS05740 d18fc004a019263f23f0b9269d7bde4c 113 SUPERFAMILY SSF50022 6 112 3.67E-22 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APY29_RS05740 d18fc004a019263f23f0b9269d7bde4c 113 Pfam PF00355 Rieske [2Fe-2S] domain 28 96 2.2E-11 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APY29_RS21280 36dbacce263a47ae1f1f996ca6873da2 187 SUPERFAMILY SSF49482 3 186 2.88E-55 T 28-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 APY29_RS21280 36dbacce263a47ae1f1f996ca6873da2 187 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 6 187 1.1E-74 T 28-03-2018 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 APY29_RS21280 36dbacce263a47ae1f1f996ca6873da2 187 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 39 67 - T 28-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 APY29_RS21280 36dbacce263a47ae1f1f996ca6873da2 187 Gene3D G3DSA:2.60.130.10 1 187 1.7E-58 T 28-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 APY29_RS21280 36dbacce263a47ae1f1f996ca6873da2 187 Pfam PF00775 Dioxygenase 29 150 1.0E-19 T 28-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 APY29_RS13425 3d7ee7a8f88a2d0298f64a5ec7e6d32b 413 Gene3D G3DSA:3.40.50.720 1 138 8.6E-46 T 28-03-2018 APY29_RS13425 3d7ee7a8f88a2d0298f64a5ec7e6d32b 413 SUPERFAMILY SSF55021 336 412 2.56E-15 T 28-03-2018 APY29_RS13425 3d7ee7a8f88a2d0298f64a5ec7e6d32b 413 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 156 183 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APY29_RS13425 3d7ee7a8f88a2d0298f64a5ec7e6d32b 413 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 202 224 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APY29_RS13425 3d7ee7a8f88a2d0298f64a5ec7e6d32b 413 SUPERFAMILY SSF51735 110 297 1.62E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS13425 3d7ee7a8f88a2d0298f64a5ec7e6d32b 413 Gene3D G3DSA:3.40.50.720 139 297 1.0E-43 T 28-03-2018 APY29_RS13425 3d7ee7a8f88a2d0298f64a5ec7e6d32b 413 SUPERFAMILY SSF52283 10 137 6.17E-47 T 28-03-2018 APY29_RS13425 3d7ee7a8f88a2d0298f64a5ec7e6d32b 413 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 121 296 4.1E-51 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APY29_RS13425 3d7ee7a8f88a2d0298f64a5ec7e6d32b 413 Gene3D G3DSA:3.30.70.260 330 412 6.0E-15 T 28-03-2018 APY29_RS13425 3d7ee7a8f88a2d0298f64a5ec7e6d32b 413 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 328 1.1E-36 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 APY29_RS19945 d583658153fab235469694d3a34d78b2 959 SUPERFAMILY SSF63411 41 251 1.7E-50 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APY29_RS19945 d583658153fab235469694d3a34d78b2 959 SUPERFAMILY SSF63411 274 463 4.67E-29 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APY29_RS19945 d583658153fab235469694d3a34d78b2 959 SUPERFAMILY SSF63411 745 936 6.33E-31 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APY29_RS19945 d583658153fab235469694d3a34d78b2 959 Pfam PF00675 Insulinase (Peptidase family M16) 529 652 5.7E-6 T 28-03-2018 IPR011765 Peptidase M16, N-terminal APY29_RS19945 d583658153fab235469694d3a34d78b2 959 Pfam PF00675 Insulinase (Peptidase family M16) 56 192 6.5E-15 T 28-03-2018 IPR011765 Peptidase M16, N-terminal APY29_RS19945 d583658153fab235469694d3a34d78b2 959 Pfam PF05193 Peptidase M16 inactive domain 684 864 3.5E-28 T 28-03-2018 IPR007863 Peptidase M16, C-terminal APY29_RS19945 d583658153fab235469694d3a34d78b2 959 Pfam PF05193 Peptidase M16 inactive domain 213 386 2.3E-29 T 28-03-2018 IPR007863 Peptidase M16, C-terminal APY29_RS19945 d583658153fab235469694d3a34d78b2 959 Gene3D G3DSA:3.30.830.10 501 734 1.0E-40 T 28-03-2018 APY29_RS19945 d583658153fab235469694d3a34d78b2 959 Gene3D G3DSA:3.30.830.10 25 261 1.5E-57 T 28-03-2018 APY29_RS19945 d583658153fab235469694d3a34d78b2 959 SUPERFAMILY SSF63411 513 732 1.75E-42 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APY29_RS19945 d583658153fab235469694d3a34d78b2 959 Gene3D G3DSA:3.30.830.10 268 473 2.3E-30 T 28-03-2018 APY29_RS19945 d583658153fab235469694d3a34d78b2 959 Gene3D G3DSA:3.30.830.10 743 943 2.2E-28 T 28-03-2018 APY29_RS16135 2e07c1cf55d38eea7724ee6636b986bb 444 SUPERFAMILY SSF50249 14 73 2.91E-10 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS16135 2e07c1cf55d38eea7724ee6636b986bb 444 SUPERFAMILY SSF53335 75 443 6.06E-82 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS16135 2e07c1cf55d38eea7724ee6636b986bb 444 Gene3D G3DSA:2.40.50.140 3 81 2.5E-22 T 28-03-2018 APY29_RS16135 2e07c1cf55d38eea7724ee6636b986bb 444 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 264 436 2.4E-56 T 28-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 APY29_RS16135 2e07c1cf55d38eea7724ee6636b986bb 444 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 426 436 - T 28-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site APY29_RS16135 2e07c1cf55d38eea7724ee6636b986bb 444 Gene3D G3DSA:3.40.50.150 82 442 9.6E-54 T 28-03-2018 APY29_RS16135 2e07c1cf55d38eea7724ee6636b986bb 444 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 14 444 67.932 T 28-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 APY29_RS16135 2e07c1cf55d38eea7724ee6636b986bb 444 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 274 443 3.0E-23 T 28-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 APY29_RS16135 2e07c1cf55d38eea7724ee6636b986bb 444 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 374 404 - T 28-03-2018 IPR030390 RNA methyltransferase TrmA, active site APY29_RS11990 a1cde1c09bdc8ddd8e488b7c7bc957c4 140 Pfam PF09335 SNARE associated Golgi protein 24 132 5.2E-10 T 28-03-2018 IPR032816 SNARE associated Golgi protein APY29_RS03905 a3c2109fdfe5c06e430b5c3b6958d286 456 Gene3D G3DSA:2.160.10.10 323 439 1.5E-27 T 28-03-2018 APY29_RS03905 a3c2109fdfe5c06e430b5c3b6958d286 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 267 295 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 APY29_RS03905 a3c2109fdfe5c06e430b5c3b6958d286 456 Gene3D G3DSA:2.160.10.10 244 322 8.5E-14 T 28-03-2018 APY29_RS03905 a3c2109fdfe5c06e430b5c3b6958d286 456 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 394 427 3.1E-8 T 28-03-2018 IPR001451 Hexapeptide repeat APY29_RS03905 a3c2109fdfe5c06e430b5c3b6958d286 456 SUPERFAMILY SSF51161 255 436 1.4E-47 T 28-03-2018 IPR011004 Trimeric LpxA-like APY29_RS03905 a3c2109fdfe5c06e430b5c3b6958d286 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 454 1.0E-186 T 28-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 APY29_RS03905 a3c2109fdfe5c06e430b5c3b6958d286 456 Pfam PF12804 MobA-like NTP transferase domain 7 129 1.6E-23 T 28-03-2018 IPR025877 MobA-like NTP transferase APY29_RS03905 a3c2109fdfe5c06e430b5c3b6958d286 456 SUPERFAMILY SSF53448 5 251 4.8E-58 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS03905 a3c2109fdfe5c06e430b5c3b6958d286 456 Gene3D G3DSA:3.90.550.10 2 243 7.7E-48 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS03905 a3c2109fdfe5c06e430b5c3b6958d286 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 4 451 40.934 T 28-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 APY29_RS03905 a3c2109fdfe5c06e430b5c3b6958d286 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 264 298 4.8E-7 T 28-03-2018 IPR001451 Hexapeptide repeat APY29_RS03905 a3c2109fdfe5c06e430b5c3b6958d286 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 317 348 1.8E-4 T 28-03-2018 IPR001451 Hexapeptide repeat APY29_RS13495 5d37378b156b9b8096b82f436e7a267d 363 Gene3D G3DSA:3.90.1150.10 249 363 5.1E-22 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS13495 5d37378b156b9b8096b82f436e7a267d 363 Gene3D G3DSA:3.40.640.10 49 248 3.4E-36 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS13495 5d37378b156b9b8096b82f436e7a267d 363 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 11 357 2.3E-107 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 APY29_RS13495 5d37378b156b9b8096b82f436e7a267d 363 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 9 359 52.835 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 APY29_RS13495 5d37378b156b9b8096b82f436e7a267d 363 SUPERFAMILY SSF53383 27 357 3.8E-72 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS13495 5d37378b156b9b8096b82f436e7a267d 363 Pfam PF00155 Aminotransferase class I and II 50 355 6.3E-51 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APY29_RS02285 d2bf2c77afd26794d62b29e02f334edf 368 Pfam PF01594 AI-2E family transporter 33 354 3.8E-42 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like APY29_RS22550 edcd41a8fc207026536de846db0e849c 321 TIGRFAM TIGR00109 hemH: ferrochelatase 8 317 1.7E-86 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 APY29_RS22550 edcd41a8fc207026536de846db0e849c 321 ProSitePatterns PS00534 Ferrochelatase signature. 192 210 - T 28-03-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 APY29_RS22550 edcd41a8fc207026536de846db0e849c 321 Pfam PF00762 Ferrochelatase 10 320 6.2E-100 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 APY29_RS22550 edcd41a8fc207026536de846db0e849c 321 SUPERFAMILY SSF53800 8 320 4.45E-93 T 28-03-2018 APY29_RS22550 edcd41a8fc207026536de846db0e849c 321 Gene3D G3DSA:3.40.50.1400 5 175 3.6E-45 T 28-03-2018 APY29_RS22550 edcd41a8fc207026536de846db0e849c 321 Gene3D G3DSA:3.40.50.1400 176 301 2.4E-37 T 28-03-2018 APY29_RS22550 edcd41a8fc207026536de846db0e849c 321 Hamap MF_00323 Ferrochelatase [hemH]. 8 321 33.355 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 SUPERFAMILY SSF82693 285 341 1.91E-22 T 28-03-2018 APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 SUPERFAMILY SSF82693 155 199 1.91E-22 T 28-03-2018 APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 SUPERFAMILY SSF82714 200 284 6.41E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 Gene3D G3DSA:3.30.70.1430 580 678 2.7E-11 T 28-03-2018 APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 SUPERFAMILY SSF82866 850 1073 1.7E-44 T 28-03-2018 APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 SUPERFAMILY SSF82866 307 508 1.96E-49 T 28-03-2018 APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 PRINTS PR00702 Acriflavin resistance protein family signature 57 75 8.9E-73 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 PRINTS PR00702 Acriflavin resistance protein family signature 374 395 8.9E-73 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 8.9E-73 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 PRINTS PR00702 Acriflavin resistance protein family signature 455 478 8.9E-73 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 PRINTS PR00702 Acriflavin resistance protein family signature 29 53 8.9E-73 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 PRINTS PR00702 Acriflavin resistance protein family signature 632 646 8.9E-73 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 PRINTS PR00702 Acriflavin resistance protein family signature 402 426 8.9E-73 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 PRINTS PR00702 Acriflavin resistance protein family signature 565 582 8.9E-73 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 PRINTS PR00702 Acriflavin resistance protein family signature 347 370 8.9E-73 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 SUPERFAMILY SSF82693 59 150 8.2E-21 T 28-03-2018 APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 Gene3D G3DSA:3.30.2090.10 198 286 2.3E-15 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 Pfam PF00873 AcrB/AcrD/AcrF family 23 1070 1.8E-297 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 Gene3D G3DSA:3.30.2090.10 729 851 2.4E-13 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 SUPERFAMILY SSF82714 729 799 2.62E-10 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 Gene3D G3DSA:1.20.1640.10 297 522 4.2E-49 T 28-03-2018 APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 Gene3D G3DSA:1.20.1640.10 865 1084 1.0E-35 T 28-03-2018 APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 Gene3D G3DSA:3.30.70.1430 59 159 6.9E-23 T 28-03-2018 APY29_RS02865 ca21c67d818122adfb1fc107b6c095c8 1101 SUPERFAMILY SSF82693 578 674 3.31E-12 T 28-03-2018 APY29_RS22290 1770de25f026cca692ac0e15b755e901 193 Pfam PF13560 Helix-turn-helix domain 10 64 4.4E-10 T 28-03-2018 APY29_RS22290 1770de25f026cca692ac0e15b755e901 193 TIGRFAM TIGR03070 couple_hipB: transcriptional regulator, y4mF family 9 65 2.8E-25 T 28-03-2018 IPR017507 Transcription regulator, HipB-like APY29_RS22290 1770de25f026cca692ac0e15b755e901 193 SUPERFAMILY SSF47413 8 65 1.15E-12 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APY29_RS22290 1770de25f026cca692ac0e15b755e901 193 Gene3D G3DSA:1.10.260.40 2 77 3.1E-14 T 28-03-2018 APY29_RS22290 1770de25f026cca692ac0e15b755e901 193 SMART SM00530 13 68 6.5E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APY29_RS20885 0bb12561cc24101650f4f6cf2070394d 327 SUPERFAMILY SSF52518 4 193 3.11E-62 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold APY29_RS20885 0bb12561cc24101650f4f6cf2070394d 327 SUPERFAMILY SSF52922 191 323 3.01E-40 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APY29_RS20885 0bb12561cc24101650f4f6cf2070394d 327 Gene3D G3DSA:3.40.50.920 197 325 2.8E-36 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APY29_RS20885 0bb12561cc24101650f4f6cf2070394d 327 Gene3D G3DSA:3.40.50.970 1 196 3.1E-58 T 28-03-2018 APY29_RS20885 0bb12561cc24101650f4f6cf2070394d 327 SMART SM00861 5 180 2.3E-58 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain APY29_RS20885 0bb12561cc24101650f4f6cf2070394d 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 179 5.5E-43 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain APY29_RS20885 0bb12561cc24101650f4f6cf2070394d 327 Pfam PF02780 Transketolase, C-terminal domain 199 316 1.8E-38 T 28-03-2018 IPR033248 Transketolase, C-terminal domain APY29_RS12550 aa7fe87734949e3b5e6eb4d3493b9057 1388 Gene3D G3DSA:1.20.1170.10 269 481 2.4E-6 T 28-03-2018 APY29_RS19040 5bb6281d255865331d3ca16dfae51f2a 477 Gene3D G3DSA:3.40.1190.10 104 320 1.7E-56 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 APY29_RS19040 5bb6281d255865331d3ca16dfae51f2a 477 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 15 473 43.271 T 28-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS19040 5bb6281d255865331d3ca16dfae51f2a 477 SUPERFAMILY SSF53623 101 317 3.92E-70 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 APY29_RS19040 5bb6281d255865331d3ca16dfae51f2a 477 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 410 2.5E-18 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 APY29_RS19040 5bb6281d255865331d3ca16dfae51f2a 477 Gene3D G3DSA:3.90.190.20 321 471 1.6E-35 T 28-03-2018 APY29_RS19040 5bb6281d255865331d3ca16dfae51f2a 477 SUPERFAMILY SSF53244 319 468 1.03E-43 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 APY29_RS19040 5bb6281d255865331d3ca16dfae51f2a 477 SUPERFAMILY SSF51984 17 102 5.36E-28 T 28-03-2018 APY29_RS19040 5bb6281d255865331d3ca16dfae51f2a 477 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 18 467 4.2E-162 T 28-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS19040 5bb6281d255865331d3ca16dfae51f2a 477 Pfam PF01225 Mur ligase family, catalytic domain 18 115 6.3E-27 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 APY29_RS19040 5bb6281d255865331d3ca16dfae51f2a 477 Gene3D G3DSA:3.40.50.720 17 103 9.9E-18 T 28-03-2018 APY29_RS19040 5bb6281d255865331d3ca16dfae51f2a 477 Pfam PF08245 Mur ligase middle domain 120 299 1.0E-27 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 APY29_RS03570 bed19af9ca0a60c87a9942aa34f475c6 272 Gene3D G3DSA:3.40.830.10 1 261 9.7E-85 T 28-03-2018 APY29_RS03570 bed19af9ca0a60c87a9942aa34f475c6 272 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 6 240 4.2E-46 T 28-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 APY29_RS03570 bed19af9ca0a60c87a9942aa34f475c6 272 PIRSF PIRSF006157 1 262 1.3E-87 T 28-03-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 APY29_RS03570 bed19af9ca0a60c87a9942aa34f475c6 272 SUPERFAMILY SSF53213 3 261 1.44E-86 T 28-03-2018 APY29_RS00685 b61f41bb09b9c37cceba6921b0c6b18d 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 192 8.7E-60 T 28-03-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 APY29_RS00685 b61f41bb09b9c37cceba6921b0c6b18d 336 SUPERFAMILY SSF56655 4 330 8.03E-113 T 28-03-2018 APY29_RS00685 b61f41bb09b9c37cceba6921b0c6b18d 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 28 55 1.8E-68 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 APY29_RS00685 b61f41bb09b9c37cceba6921b0c6b18d 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 204 231 1.8E-68 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 APY29_RS00685 b61f41bb09b9c37cceba6921b0c6b18d 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 178 201 1.8E-68 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 APY29_RS00685 b61f41bb09b9c37cceba6921b0c6b18d 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 306 331 1.8E-68 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 APY29_RS00685 b61f41bb09b9c37cceba6921b0c6b18d 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 147 170 1.8E-68 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 APY29_RS00685 b61f41bb09b9c37cceba6921b0c6b18d 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 65 91 1.8E-68 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 APY29_RS00685 b61f41bb09b9c37cceba6921b0c6b18d 336 PIRSF PIRSF500210 1 335 9.9E-125 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 APY29_RS00685 b61f41bb09b9c37cceba6921b0c6b18d 336 PIRSF PIRSF000904 1 336 1.8E-123 T 28-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 APY29_RS00685 b61f41bb09b9c37cceba6921b0c6b18d 336 Gene3D G3DSA:3.40.190.80 199 333 6.4E-56 T 28-03-2018 APY29_RS00685 b61f41bb09b9c37cceba6921b0c6b18d 336 Gene3D G3DSA:3.30.540.10 7 198 2.0E-59 T 28-03-2018 APY29_RS00685 b61f41bb09b9c37cceba6921b0c6b18d 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 332 45.787 T 28-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 APY29_RS22235 c12488177242435097c022045959d55c 329 PIRSF PIRSF005211 1 329 1.8E-75 T 28-03-2018 IPR012020 AB hydrolase 4 family APY29_RS22235 c12488177242435097c022045959d55c 329 SUPERFAMILY SSF53474 259 321 2.61E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS22235 c12488177242435097c022045959d55c 329 SUPERFAMILY SSF53474 41 184 2.61E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS22235 c12488177242435097c022045959d55c 329 Gene3D G3DSA:3.40.50.1820 27 317 3.1E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS22235 c12488177242435097c022045959d55c 329 Pfam PF12146 Serine aminopeptidase, S33 67 282 8.2E-13 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 APY29_RS18615 dc8de662a850bae79a2568747d477b25 262 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 258 5.2E-61 T 28-03-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm APY29_RS18615 dc8de662a850bae79a2568747d477b25 262 SMART SM00650 23 194 2.3E-80 T 28-03-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 APY29_RS18615 dc8de662a850bae79a2568747d477b25 262 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 9 258 7.1E-82 T 28-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 APY29_RS18615 dc8de662a850bae79a2568747d477b25 262 Gene3D G3DSA:3.40.50.150 2 199 5.0E-54 T 28-03-2018 APY29_RS18615 dc8de662a850bae79a2568747d477b25 262 Gene3D G3DSA:1.10.8.100 200 259 1.1E-18 T 28-03-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 APY29_RS18615 dc8de662a850bae79a2568747d477b25 262 SUPERFAMILY SSF53335 15 259 1.3E-72 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS18615 dc8de662a850bae79a2568747d477b25 262 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 7 261 55.283 T 28-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 APY29_RS18615 dc8de662a850bae79a2568747d477b25 262 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 39 66 - T 28-03-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 APY29_RS00990 9b8470d948d66b799b5320c5996a64f3 93 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 2 93 3.1E-31 T 28-03-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin APY29_RS00990 9b8470d948d66b799b5320c5996a64f3 93 SUPERFAMILY SSF143011 1 92 5.3E-24 T 28-03-2018 IPR035095 Toxin RelE-like domain APY29_RS00990 9b8470d948d66b799b5320c5996a64f3 93 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 92 3.2E-22 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family APY29_RS00990 9b8470d948d66b799b5320c5996a64f3 93 Gene3D G3DSA:3.30.2310.20 1 93 9.9E-22 T 28-03-2018 APY29_RS00990 9b8470d948d66b799b5320c5996a64f3 93 PIRSF PIRSF006156 1 93 6.7E-24 T 28-03-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin APY29_RS21615 b381f3869339b869852e89168f57c960 270 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 192 208 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APY29_RS21615 b381f3869339b869852e89168f57c960 270 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APY29_RS21615 b381f3869339b869852e89168f57c960 270 PIRSF PIRSF005902 1 264 1.1E-72 T 28-03-2018 IPR001130 TatD family GO:0016788 APY29_RS21615 b381f3869339b869852e89168f57c960 270 Gene3D G3DSA:3.20.20.140 1 269 2.8E-84 T 28-03-2018 APY29_RS21615 b381f3869339b869852e89168f57c960 270 SUPERFAMILY SSF51556 3 261 1.99E-82 T 28-03-2018 IPR032466 Metal-dependent hydrolase APY29_RS21615 b381f3869339b869852e89168f57c960 270 Pfam PF01026 TatD related DNase 4 259 2.9E-70 T 28-03-2018 IPR001130 TatD family GO:0016788 APY29_RS14040 76faf840ad32ce671667a2f57917187a 124 SUPERFAMILY SSF64076 1 123 2.22E-30 T 28-03-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein APY29_RS14040 76faf840ad32ce671667a2f57917187a 124 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 20 120 7.3E-24 T 28-03-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein APY29_RS14040 76faf840ad32ce671667a2f57917187a 124 Gene3D G3DSA:3.40.1230.10 1 123 5.1E-27 T 28-03-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein APY29_RS00815 f9da2ef989c4dd6689700e7061ceeb86 1116 SUPERFAMILY SSF56112 864 1007 4.42E-14 T 28-03-2018 IPR011009 Protein kinase-like domain APY29_RS00815 f9da2ef989c4dd6689700e7061ceeb86 1116 SUPERFAMILY SSF56112 733 836 4.42E-14 T 28-03-2018 IPR011009 Protein kinase-like domain APY29_RS00815 f9da2ef989c4dd6689700e7061ceeb86 1116 SUPERFAMILY SSF56112 1038 1060 4.42E-14 T 28-03-2018 IPR011009 Protein kinase-like domain APY29_RS00815 f9da2ef989c4dd6689700e7061ceeb86 1116 Pfam PF16657 Maltogenic Amylase, C-terminal domain 478 554 2.1E-26 T 28-03-2018 IPR032091 Maltogenic Amylase, C-terminal APY29_RS00815 f9da2ef989c4dd6689700e7061ceeb86 1116 SUPERFAMILY SSF51011 482 558 2.34E-17 T 28-03-2018 APY29_RS00815 f9da2ef989c4dd6689700e7061ceeb86 1116 SUPERFAMILY SSF51445 34 478 1.91E-131 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS00815 f9da2ef989c4dd6689700e7061ceeb86 1116 Gene3D G3DSA:3.90.1200.10 845 1110 4.6E-15 T 28-03-2018 APY29_RS00815 f9da2ef989c4dd6689700e7061ceeb86 1116 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 21 558 3.7E-301 T 28-03-2018 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622 APY29_RS00815 f9da2ef989c4dd6689700e7061ceeb86 1116 Gene3D G3DSA:2.60.40.1180 478 569 3.9E-24 T 28-03-2018 APY29_RS00815 f9da2ef989c4dd6689700e7061ceeb86 1116 Gene3D G3DSA:3.20.20.80 27 477 2.6E-121 T 28-03-2018 APY29_RS00815 f9da2ef989c4dd6689700e7061ceeb86 1116 SMART SM00642 30 430 1.2E-105 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS00815 f9da2ef989c4dd6689700e7061ceeb86 1116 TIGRFAM TIGR02457 TreS_Cterm: putative maltokinase 575 1106 4.9E-220 T 28-03-2018 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain APY29_RS00815 f9da2ef989c4dd6689700e7061ceeb86 1116 Pfam PF00128 Alpha amylase, catalytic domain 45 399 3.0E-75 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS14390 711067122f63b3afffcf45bc01158914 180 Gene3D G3DSA:3.40.30.10 29 178 1.7E-27 T 28-03-2018 APY29_RS14390 711067122f63b3afffcf45bc01158914 180 SUPERFAMILY SSF52833 33 175 3.75E-33 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS14390 711067122f63b3afffcf45bc01158914 180 Pfam PF08534 Redoxin 38 161 6.2E-16 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 APY29_RS14390 711067122f63b3afffcf45bc01158914 180 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 4 172 3.6E-49 T 28-03-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 SUPERFAMILY SSF52833 106 196 2.35E-22 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 SUPERFAMILY SSF52833 1 101 9.51E-31 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 3.7E-64 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 3.7E-64 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 352 376 3.7E-64 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 443 464 3.7E-64 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 477 495 3.7E-64 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 337 349 3.7E-64 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 404 420 3.7E-64 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 3.7E-64 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 315 323 3.7E-64 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 Gene3D G3DSA:3.50.50.60 197 229 1.0E-8 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 374 6.9E-40 T 28-03-2018 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 467 489 6.9E-40 T 28-03-2018 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 6.9E-40 T 28-03-2018 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 441 457 6.9E-40 T 28-03-2018 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 314 332 6.9E-40 T 28-03-2018 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 SUPERFAMILY SSF51905 205 513 3.71E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 PIRSF PIRSF000238 1 520 6.9E-270 T 28-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 344 364 - T 28-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 Gene3D G3DSA:3.50.50.60 230 340 1.3E-11 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 Gene3D G3DSA:3.40.30.10 1 94 4.9E-28 T 28-03-2018 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 Gene3D G3DSA:3.40.30.10 103 196 3.7E-9 T 28-03-2018 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 Gene3D G3DSA:3.50.50.60 444 530 2.2E-12 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 Pfam PF13192 Thioredoxin domain 125 195 1.6E-8 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 Gene3D G3DSA:3.50.50.60 341 443 4.4E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 516 4.1E-242 T 28-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 APY29_RS18375 43f9047951c0d7d4ca69438461171e29 530 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 503 1.4E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS23455 85968634b3c804b34d5c429e2ad4d042 307 Gene3D G3DSA:1.10.10.60 131 172 8.1E-8 T 28-03-2018 APY29_RS23455 85968634b3c804b34d5c429e2ad4d042 307 Gene3D G3DSA:3.40.50.1390 1 107 2.4E-31 T 28-03-2018 APY29_RS23455 85968634b3c804b34d5c429e2ad4d042 307 SMART SM00857 2 136 8.9E-58 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APY29_RS23455 85968634b3c804b34d5c429e2ad4d042 307 Pfam PF00239 Resolvase, N terminal domain 3 135 2.8E-43 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APY29_RS23455 85968634b3c804b34d5c429e2ad4d042 307 Gene3D G3DSA:1.10.260.40 173 287 2.9E-4 T 28-03-2018 APY29_RS23455 85968634b3c804b34d5c429e2ad4d042 307 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 APY29_RS23455 85968634b3c804b34d5c429e2ad4d042 307 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 APY29_RS23455 85968634b3c804b34d5c429e2ad4d042 307 SUPERFAMILY SSF53041 1 135 8.11E-44 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APY29_RS23455 85968634b3c804b34d5c429e2ad4d042 307 Gene3D G3DSA:1.20.5.40 108 130 3.0E-16 T 28-03-2018 APY29_RS06180 eb7e34717aa9c48da530af3a48ec02cb 429 SUPERFAMILY SSF56059 118 337 7.81E-31 T 28-03-2018 APY29_RS06180 eb7e34717aa9c48da530af3a48ec02cb 429 Pfam PF02655 ATP-grasp domain 137 303 4.1E-6 T 28-03-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 APY29_RS06180 eb7e34717aa9c48da530af3a48ec02cb 429 Gene3D G3DSA:3.40.50.20 44 143 1.9E-5 T 28-03-2018 APY29_RS06180 eb7e34717aa9c48da530af3a48ec02cb 429 Gene3D G3DSA:3.30.470.20 144 416 6.0E-28 T 28-03-2018 APY29_RS13520 5fe868c65f530893a898bd551944e3af 253 SUPERFAMILY SSF51206 31 166 2.62E-27 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like APY29_RS13520 5fe868c65f530893a898bd551944e3af 253 Gene3D G3DSA:1.10.10.10 169 249 1.7E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS13520 5fe868c65f530893a898bd551944e3af 253 SUPERFAMILY SSF46785 172 250 1.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS13520 5fe868c65f530893a898bd551944e3af 253 SMART SM00419 192 241 1.4E-15 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APY29_RS13520 5fe868c65f530893a898bd551944e3af 253 Pfam PF13545 Crp-like helix-turn-helix domain 173 248 9.0E-21 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APY29_RS13520 5fe868c65f530893a898bd551944e3af 253 Gene3D G3DSA:2.60.120.10 33 168 2.4E-18 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS13520 5fe868c65f530893a898bd551944e3af 253 SMART SM00100 38 156 8.6E-17 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain APY29_RS13520 5fe868c65f530893a898bd551944e3af 253 Pfam PF00027 Cyclic nucleotide-binding domain 59 141 3.2E-14 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain APY29_RS13520 5fe868c65f530893a898bd551944e3af 253 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 198 214 3.1E-11 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APY29_RS13520 5fe868c65f530893a898bd551944e3af 253 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 214 229 3.1E-11 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APY29_RS13095 5decea1ef458520a2e6e03e3ec468d2b 763 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 546 573 5.2E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13095 5decea1ef458520a2e6e03e3ec468d2b 763 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 575 604 5.2E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13095 5decea1ef458520a2e6e03e3ec468d2b 763 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 188 213 5.2E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13095 5decea1ef458520a2e6e03e3ec468d2b 763 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 469 498 5.2E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13095 5decea1ef458520a2e6e03e3ec468d2b 763 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 623 652 5.2E-60 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13095 5decea1ef458520a2e6e03e3ec468d2b 763 SMART SM00304 395 447 15.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13095 5decea1ef458520a2e6e03e3ec468d2b 763 SMART SM00304 214 266 1.2E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13095 5decea1ef458520a2e6e03e3ec468d2b 763 Pfam PF00672 HAMP domain 214 263 5.8E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13095 5decea1ef458520a2e6e03e3ec468d2b 763 SMART SM00283 448 695 2.0E-87 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS13095 5decea1ef458520a2e6e03e3ec468d2b 763 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 508 662 2.9E-53 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS13095 5decea1ef458520a2e6e03e3ec468d2b 763 Gene3D G3DSA:1.20.120.30 25 188 1.3E-18 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain APY29_RS13095 5decea1ef458520a2e6e03e3ec468d2b 763 SUPERFAMILY SSF58104 415 696 5.23E-70 T 28-03-2018 APY29_RS13095 5decea1ef458520a2e6e03e3ec468d2b 763 Gene3D G3DSA:1.10.287.950 499 699 6.0E-48 T 28-03-2018 APY29_RS13095 5decea1ef458520a2e6e03e3ec468d2b 763 Gene3D G3DSA:1.10.287.950 221 498 1.3E-14 T 28-03-2018 APY29_RS13095 5decea1ef458520a2e6e03e3ec468d2b 763 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 185 1.0E-20 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain APY29_RS13095 5decea1ef458520a2e6e03e3ec468d2b 763 SUPERFAMILY SSF158472 214 263 7.06E-9 T 28-03-2018 APY29_RS13225 ec18b89ad3da49585e51bece7252a963 863 Gene3D G3DSA:3.40.1060.10 524 685 7.2E-29 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS13225 ec18b89ad3da49585e51bece7252a963 863 SUPERFAMILY SSF74778 1 160 3.27E-67 T 28-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 APY29_RS13225 ec18b89ad3da49585e51bece7252a963 863 Gene3D G3DSA:3.20.19.10 162 362 3.6E-28 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APY29_RS13225 ec18b89ad3da49585e51bece7252a963 863 Pfam PF11791 Aconitate B N-terminal domain 4 156 5.3E-65 T 28-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 APY29_RS13225 ec18b89ad3da49585e51bece7252a963 863 Gene3D G3DSA:3.30.499.10 405 523 2.1E-10 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS13225 ec18b89ad3da49585e51bece7252a963 863 PIRSF PIRSF036687 1 861 0.0 T 28-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 APY29_RS13225 ec18b89ad3da49585e51bece7252a963 863 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 7.1E-94 T 28-03-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 APY29_RS13225 ec18b89ad3da49585e51bece7252a963 863 SUPERFAMILY SSF52016 162 372 1.37E-64 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APY29_RS13225 ec18b89ad3da49585e51bece7252a963 863 ProSitePatterns PS00450 Aconitase family signature 1. 705 722 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 APY29_RS13225 ec18b89ad3da49585e51bece7252a963 863 SUPERFAMILY SSF53732 380 856 4.05E-145 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS13225 ec18b89ad3da49585e51bece7252a963 863 Gene3D G3DSA:3.30.499.10 686 863 4.1E-49 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS13225 ec18b89ad3da49585e51bece7252a963 863 Pfam PF00330 Aconitase family (aconitate hydratase) 474 817 9.6E-40 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS13225 ec18b89ad3da49585e51bece7252a963 863 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 855 0.0 T 28-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 APY29_RS07270 dbf968e2f61d1efdc6eeb6703461fb19 130 Pfam PF03610 PTS system fructose IIA component 4 103 9.1E-13 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APY29_RS07270 dbf968e2f61d1efdc6eeb6703461fb19 130 SUPERFAMILY SSF53062 4 124 1.44E-23 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APY29_RS07270 dbf968e2f61d1efdc6eeb6703461fb19 130 Gene3D G3DSA:3.40.50.510 3 127 3.8E-24 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APY29_RS10055 aa93e0fcb2e0011379fd286aaf5b1b0c 569 SUPERFAMILY SSF53187 464 540 3.04E-52 T 28-03-2018 APY29_RS10055 aa93e0fcb2e0011379fd286aaf5b1b0c 569 SUPERFAMILY SSF53187 320 416 3.04E-52 T 28-03-2018 APY29_RS10055 aa93e0fcb2e0011379fd286aaf5b1b0c 569 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 322 537 2.0E-47 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 APY29_RS10055 aa93e0fcb2e0011379fd286aaf5b1b0c 569 Pfam PF11741 AMIN domain 39 113 4.8E-12 T 28-03-2018 IPR021731 AMIN domain APY29_RS10055 aa93e0fcb2e0011379fd286aaf5b1b0c 569 SMART SM00646 382 537 8.1E-64 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 APY29_RS10055 aa93e0fcb2e0011379fd286aaf5b1b0c 569 Gene3D G3DSA:3.40.630.40 317 545 1.6E-56 T 28-03-2018 APY29_RS11855 8eb9467488ea290c1f38df682e20f6e2 140 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 45 121 7.5E-21 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 APY29_RS11855 8eb9467488ea290c1f38df682e20f6e2 140 Gene3D G3DSA:3.30.1150.10 20 128 1.5E-22 T 28-03-2018 APY29_RS11855 8eb9467488ea290c1f38df682e20f6e2 140 SUPERFAMILY SSF74653 38 119 2.49E-20 T 28-03-2018 APY29_RS11855 8eb9467488ea290c1f38df682e20f6e2 140 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 43 120 8.8E-22 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 APY29_RS18440 917940c7cf7bbeb665e8ed0bc90c0843 579 PRINTS PR00987 Glutamyl-tRNA synthetase signature 67 80 8.0E-8 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 APY29_RS18440 917940c7cf7bbeb665e8ed0bc90c0843 579 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 50 8.0E-8 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 APY29_RS18440 917940c7cf7bbeb665e8ed0bc90c0843 579 PRINTS PR00987 Glutamyl-tRNA synthetase signature 216 226 8.0E-8 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 APY29_RS18440 917940c7cf7bbeb665e8ed0bc90c0843 579 Gene3D G3DSA:2.40.240.10 489 575 1.0E-29 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 APY29_RS18440 917940c7cf7bbeb665e8ed0bc90c0843 579 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 364 556 3.9E-55 T 28-03-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 APY29_RS18440 917940c7cf7bbeb665e8ed0bc90c0843 579 SUPERFAMILY SSF50715 364 575 8.89E-70 T 28-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 APY29_RS18440 917940c7cf7bbeb665e8ed0bc90c0843 579 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 577 52.457 T 28-03-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 APY29_RS18440 917940c7cf7bbeb665e8ed0bc90c0843 579 Gene3D G3DSA:3.40.50.620 50 158 3.2E-35 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS18440 917940c7cf7bbeb665e8ed0bc90c0843 579 Gene3D G3DSA:3.40.50.620 161 284 9.1E-17 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS18440 917940c7cf7bbeb665e8ed0bc90c0843 579 SUPERFAMILY SSF52374 19 361 5.63E-89 T 28-03-2018 APY29_RS18440 917940c7cf7bbeb665e8ed0bc90c0843 579 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 35 360 3.9E-92 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 APY29_RS18440 917940c7cf7bbeb665e8ed0bc90c0843 579 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 35 579 9.5E-202 T 28-03-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 APY29_RS18440 917940c7cf7bbeb665e8ed0bc90c0843 579 Gene3D G3DSA:3.40.50.620 27 49 0.15 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS18440 917940c7cf7bbeb665e8ed0bc90c0843 579 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 52 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS18440 917940c7cf7bbeb665e8ed0bc90c0843 579 Gene3D G3DSA:1.10.1160.10 285 362 9.8E-34 T 28-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APY29_RS18440 917940c7cf7bbeb665e8ed0bc90c0843 579 Gene3D G3DSA:2.40.240.10 368 488 3.5E-44 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 APY29_RS15045 801b41ed7bde7daab41087db072a6cae 185 ProSitePatterns PS00460 Glutathione peroxidases active site. 48 63 - T 28-03-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 APY29_RS15045 801b41ed7bde7daab41087db072a6cae 185 Gene3D G3DSA:3.40.30.10 26 182 5.8E-34 T 28-03-2018 APY29_RS15045 801b41ed7bde7daab41087db072a6cae 185 PRINTS PR01011 Glutathione peroxidase family signature 81 97 1.5E-14 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 APY29_RS15045 801b41ed7bde7daab41087db072a6cae 185 PRINTS PR01011 Glutathione peroxidase family signature 142 151 1.5E-14 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 APY29_RS15045 801b41ed7bde7daab41087db072a6cae 185 PRINTS PR01011 Glutathione peroxidase family signature 46 63 1.5E-14 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 APY29_RS15045 801b41ed7bde7daab41087db072a6cae 185 PIRSF PIRSF000303 2 184 3.4E-55 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 APY29_RS15045 801b41ed7bde7daab41087db072a6cae 185 SUPERFAMILY SSF52833 25 180 1.32E-48 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS15045 801b41ed7bde7daab41087db072a6cae 185 Pfam PF00255 Glutathione peroxidase 32 134 1.8E-32 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 APY29_RS19765 99f0f1cf1accabbeb15823fa61e63175 648 Gene3D G3DSA:2.60.40.1730 38 245 2.2E-38 T 28-03-2018 APY29_RS19765 99f0f1cf1accabbeb15823fa61e63175 648 Gene3D G3DSA:1.10.390.10 318 487 1.8E-38 T 28-03-2018 APY29_RS19765 99f0f1cf1accabbeb15823fa61e63175 648 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 228 243 1.4E-16 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APY29_RS19765 99f0f1cf1accabbeb15823fa61e63175 648 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 183 198 1.4E-16 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APY29_RS19765 99f0f1cf1accabbeb15823fa61e63175 648 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 329 344 1.4E-16 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APY29_RS19765 99f0f1cf1accabbeb15823fa61e63175 648 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 302 312 1.4E-16 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APY29_RS19765 99f0f1cf1accabbeb15823fa61e63175 648 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 348 360 1.4E-16 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APY29_RS19765 99f0f1cf1accabbeb15823fa61e63175 648 Pfam PF01433 Peptidase family M1 domain 254 466 7.2E-48 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APY29_RS19765 99f0f1cf1accabbeb15823fa61e63175 648 Pfam PF09127 Leukotriene A4 hydrolase, C-terminal 526 636 1.8E-26 T 28-03-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 KEGG: 00590+3.3.2.6 APY29_RS19765 99f0f1cf1accabbeb15823fa61e63175 648 SMART SM01263 498 637 8.2E-47 T 28-03-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 KEGG: 00590+3.3.2.6 APY29_RS19765 99f0f1cf1accabbeb15823fa61e63175 648 SUPERFAMILY SSF63737 46 245 1.44E-37 T 28-03-2018 APY29_RS19765 99f0f1cf1accabbeb15823fa61e63175 648 SUPERFAMILY SSF55486 250 491 3.77E-69 T 28-03-2018 APY29_RS19765 99f0f1cf1accabbeb15823fa61e63175 648 SUPERFAMILY SSF48371 501 637 1.9E-37 T 28-03-2018 IPR016024 Armadillo-type fold GO:0005488 APY29_RS01135 c7f726e5b3b4a3648fc9bf491035f3fe 285 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 72 278 3.2E-74 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APY29_RS01135 c7f726e5b3b4a3648fc9bf491035f3fe 285 SUPERFAMILY SSF56529 61 279 3.27E-85 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APY29_RS01135 c7f726e5b3b4a3648fc9bf491035f3fe 285 Gene3D G3DSA:3.90.850.10 25 285 3.2E-87 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APY29_RS20940 7f3c66e11fdc43c1713da0d547fbb49e 469 Pfam PF13454 FAD-NAD(P)-binding 7 149 4.6E-24 T 28-03-2018 APY29_RS20940 7f3c66e11fdc43c1713da0d547fbb49e 469 Gene3D G3DSA:3.50.50.60 181 448 1.8E-10 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS20940 7f3c66e11fdc43c1713da0d547fbb49e 469 Pfam PF00890 FAD binding domain 395 424 2.3E-5 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 APY29_RS20940 7f3c66e11fdc43c1713da0d547fbb49e 469 SUPERFAMILY SSF51905 1 218 1.18E-14 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS20940 7f3c66e11fdc43c1713da0d547fbb49e 469 SUPERFAMILY SSF51905 186 270 2.37E-7 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS20940 7f3c66e11fdc43c1713da0d547fbb49e 469 SUPERFAMILY SSF51905 303 445 2.37E-7 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS20940 7f3c66e11fdc43c1713da0d547fbb49e 469 Gene3D G3DSA:3.50.50.60 1 180 5.1E-14 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 601 8.0E-285 T 28-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 SUPERFAMILY SSF53067 188 383 7.41E-68 T 28-03-2018 APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 SUPERFAMILY SSF100920 385 541 1.96E-59 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 Gene3D G3DSA:1.20.1270.10 534 604 4.6E-18 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 Pfam PF00012 Hsp70 protein 4 601 4.8E-261 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 Gene3D G3DSA:3.30.420.40 198 367 1.3E-46 T 28-03-2018 APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.4E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 PRINTS PR00301 70kDa heat shock protein signature 199 209 2.4E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.4E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 PRINTS PR00301 70kDa heat shock protein signature 139 159 2.4E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 PRINTS PR00301 70kDa heat shock protein signature 366 386 2.4E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 PRINTS PR00301 70kDa heat shock protein signature 470 486 2.4E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 PRINTS PR00301 70kDa heat shock protein signature 389 408 2.4E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.4E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 PRINTS PR00301 70kDa heat shock protein signature 335 351 2.4E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 SUPERFAMILY SSF53067 4 185 7.12E-66 T 28-03-2018 APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 Gene3D G3DSA:2.60.34.10 391 533 3.7E-63 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 Gene3D G3DSA:3.30.420.40 1 197 5.7E-80 T 28-03-2018 APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 APY29_RS15195 6ffd6a3044b4052a3fa6a02baef9d13b 641 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 636 36.268 T 28-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 APY29_RS16315 7b29ca5c98eefd3f41b51832afacca71 135 SUPERFAMILY SSF55174 8 106 2.36E-24 T 28-03-2018 APY29_RS16315 7b29ca5c98eefd3f41b51832afacca71 135 Pfam PF01479 S4 domain 11 56 3.1E-7 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS16315 7b29ca5c98eefd3f41b51832afacca71 135 Gene3D G3DSA:3.10.290.10 5 107 2.2E-20 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS00525 dacc20efbcfbb6f51470d2a4809d88e4 303 Gene3D G3DSA:1.10.10.10 3 83 3.5E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS00525 dacc20efbcfbb6f51470d2a4809d88e4 303 Pfam PF03466 LysR substrate binding domain 88 291 4.6E-38 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS00525 dacc20efbcfbb6f51470d2a4809d88e4 303 Gene3D G3DSA:3.40.190.10 175 261 4.5E-21 T 28-03-2018 APY29_RS00525 dacc20efbcfbb6f51470d2a4809d88e4 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.8E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS00525 dacc20efbcfbb6f51470d2a4809d88e4 303 Gene3D G3DSA:3.40.190.10 90 174 2.5E-14 T 28-03-2018 APY29_RS00525 dacc20efbcfbb6f51470d2a4809d88e4 303 SUPERFAMILY SSF46785 4 85 4.57E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS00525 dacc20efbcfbb6f51470d2a4809d88e4 303 SUPERFAMILY SSF53850 88 294 1.23E-40 T 28-03-2018 APY29_RS01150 483c996fd3b8278bbb804f788453791c 336 SUPERFAMILY SSF51430 7 325 3.4E-63 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS01150 483c996fd3b8278bbb804f788453791c 336 Gene3D G3DSA:3.20.20.100 4 326 6.0E-59 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS01150 483c996fd3b8278bbb804f788453791c 336 Pfam PF00248 Aldo/keto reductase family 19 323 1.5E-45 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS04795 23b49aae4d41fc053a278d0dc3b04847 824 Pfam PF00593 TonB dependent receptor 334 822 7.9E-20 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS04795 23b49aae4d41fc053a278d0dc3b04847 824 Gene3D G3DSA:2.40.170.20 190 824 4.2E-46 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS04795 23b49aae4d41fc053a278d0dc3b04847 824 Gene3D G3DSA:2.170.130.10 45 189 2.3E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS04795 23b49aae4d41fc053a278d0dc3b04847 824 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 181 2.0E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS04795 23b49aae4d41fc053a278d0dc3b04847 824 SUPERFAMILY SSF56935 573 824 1.18E-87 T 28-03-2018 APY29_RS04795 23b49aae4d41fc053a278d0dc3b04847 824 SUPERFAMILY SSF56935 45 544 1.18E-87 T 28-03-2018 APY29_RS19010 15d2098c45dd7a0c7a32c8d2549d450b 148 Pfam PF05258 Protein of unknown function (DUF721) 31 94 2.0E-10 T 28-03-2018 IPR007922 Protein of unknown function DUF721/UPF0232 APY29_RS03575 581e0b74423b924335d496cad523d3b2 414 SUPERFAMILY SSF102114 45 184 2.49E-15 T 28-03-2018 APY29_RS03575 581e0b74423b924335d496cad523d3b2 414 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 3 406 1.4E-168 T 28-03-2018 IPR023874 DNA modification/repair radical SAM protein, putative APY29_RS03575 581e0b74423b924335d496cad523d3b2 414 SUPERFAMILY SSF47781 310 382 9.45E-8 T 28-03-2018 IPR010994 RuvA domain 2-like APY29_RS03575 581e0b74423b924335d496cad523d3b2 414 SMART SM00729 56 287 0.0085 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APY29_RS03575 581e0b74423b924335d496cad523d3b2 414 Gene3D G3DSA:3.20.20.70 9 311 2.5E-36 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS03575 581e0b74423b924335d496cad523d3b2 414 Pfam PF04055 Radical SAM superfamily 62 239 2.3E-7 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 APY29_RS05135 7f124581f75d855c4a955bd540d6abb3 527 Pfam PF01593 Flavin containing amine oxidoreductase 56 516 4.8E-64 T 28-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 APY29_RS05135 7f124581f75d855c4a955bd540d6abb3 527 Gene3D G3DSA:3.90.660.10 91 460 2.1E-59 T 28-03-2018 APY29_RS05135 7f124581f75d855c4a955bd540d6abb3 527 SUPERFAMILY SSF51905 44 377 7.34E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS05135 7f124581f75d855c4a955bd540d6abb3 527 SUPERFAMILY SSF51905 477 518 7.34E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS05135 7f124581f75d855c4a955bd540d6abb3 527 SUPERFAMILY SSF54373 357 467 2.22E-30 T 28-03-2018 APY29_RS05135 7f124581f75d855c4a955bd540d6abb3 527 Gene3D G3DSA:3.50.50.60 21 90 2.1E-6 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS01280 5b1e95f87358f3226d85195431c37564 425 Gene3D G3DSA:2.40.50.100 198 251 5.4E-14 T 28-03-2018 APY29_RS01280 5b1e95f87358f3226d85195431c37564 425 SUPERFAMILY SSF51230 198 267 6.02E-13 T 28-03-2018 IPR011053 Single hybrid motif APY29_RS01280 5b1e95f87358f3226d85195431c37564 425 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 235 338 2.8E-17 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APY29_RS01280 5b1e95f87358f3226d85195431c37564 425 Gene3D G3DSA:2.40.50.100 252 394 0.018 T 28-03-2018 APY29_RS10580 b4d0c9b2187e359ca1d582d62b7a92a4 406 Pfam PF01963 TraB family 21 242 1.4E-24 T 28-03-2018 IPR002816 Pheromone shutdown, TraB APY29_RS10580 b4d0c9b2187e359ca1d582d62b7a92a4 406 TIGRFAM TIGR00261 traB: TraB family protein 28 403 4.1E-78 T 28-03-2018 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal APY29_RS05850 392c861be4b499277b400a4540fc467b 295 Gene3D G3DSA:3.30.1490.20 103 169 2.9E-8 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APY29_RS05850 392c861be4b499277b400a4540fc467b 295 Pfam PF08443 RimK-like ATP-grasp domain 98 283 4.1E-57 T 28-03-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 APY29_RS05850 392c861be4b499277b400a4540fc467b 295 Gene3D G3DSA:3.40.50.20 1 102 2.4E-37 T 28-03-2018 APY29_RS05850 392c861be4b499277b400a4540fc467b 295 SUPERFAMILY SSF56059 98 288 1.13E-44 T 28-03-2018 APY29_RS05850 392c861be4b499277b400a4540fc467b 295 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 52.862 T 28-03-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK APY29_RS05850 392c861be4b499277b400a4540fc467b 295 Gene3D G3DSA:3.30.470.20 170 277 2.8E-33 T 28-03-2018 APY29_RS05850 392c861be4b499277b400a4540fc467b 295 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 283 2.4E-76 T 28-03-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 APY29_RS09660 655ac253ed9e0390414052c09ec429b1 435 SUPERFAMILY SSF111369 48 292 4.71E-69 T 28-03-2018 APY29_RS09660 655ac253ed9e0390414052c09ec429b1 435 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 289 1.8E-12 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APY29_RS09660 655ac253ed9e0390414052c09ec429b1 435 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 367 5.0E-75 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 APY29_RS09660 655ac253ed9e0390414052c09ec429b1 435 Gene3D G3DSA:2.40.50.100 164 367 0.011 T 28-03-2018 APY29_RS09660 655ac253ed9e0390414052c09ec429b1 435 Gene3D G3DSA:2.40.50.100 59 116 2.0E-16 T 28-03-2018 APY29_RS09660 655ac253ed9e0390414052c09ec429b1 435 Gene3D G3DSA:1.10.287.470 117 163 7.4E-9 T 28-03-2018 APY29_RS02095 1c04150cb25f2b972771a1429cfeab8c 321 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 2 319 30.455 T 28-03-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 APY29_RS02095 1c04150cb25f2b972771a1429cfeab8c 321 Gene3D G3DSA:3.30.930.10 62 270 4.9E-50 T 28-03-2018 APY29_RS02095 1c04150cb25f2b972771a1429cfeab8c 321 Pfam PF03099 Biotin/lipoate A/B protein ligase family 89 209 5.4E-9 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 APY29_RS02095 1c04150cb25f2b972771a1429cfeab8c 321 Gene3D G3DSA:2.30.30.100 274 320 2.1E-11 T 28-03-2018 APY29_RS02095 1c04150cb25f2b972771a1429cfeab8c 321 SUPERFAMILY SSF55681 84 270 3.64E-48 T 28-03-2018 APY29_RS02095 1c04150cb25f2b972771a1429cfeab8c 321 Pfam PF02237 Biotin protein ligase C terminal domain 274 319 7.3E-8 T 28-03-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 APY29_RS02095 1c04150cb25f2b972771a1429cfeab8c 321 Pfam PF08279 HTH domain 11 54 3.4E-10 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 APY29_RS02095 1c04150cb25f2b972771a1429cfeab8c 321 SUPERFAMILY SSF50037 275 319 6.87E-7 T 28-03-2018 IPR008988 Transcriptional repressor, C-terminal APY29_RS02095 1c04150cb25f2b972771a1429cfeab8c 321 SUPERFAMILY SSF46785 5 56 5.54E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS02095 1c04150cb25f2b972771a1429cfeab8c 321 Gene3D G3DSA:1.10.10.10 3 59 2.4E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS02095 1c04150cb25f2b972771a1429cfeab8c 321 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 87 318 2.6E-47 T 28-03-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 APY29_RS22660 50e69ed5fc15a3bc2a4aca6d64d536a3 345 Gene3D G3DSA:3.40.605.10 1 102 4.9E-39 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APY29_RS22660 50e69ed5fc15a3bc2a4aca6d64d536a3 345 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 112 123 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APY29_RS22660 50e69ed5fc15a3bc2a4aca6d64d536a3 345 Gene3D G3DSA:3.40.309.10 103 296 7.3E-62 T 28-03-2018 APY29_RS22660 50e69ed5fc15a3bc2a4aca6d64d536a3 345 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 84 91 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APY29_RS22660 50e69ed5fc15a3bc2a4aca6d64d536a3 345 SUPERFAMILY SSF53720 2 313 6.94E-94 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APY29_RS22660 50e69ed5fc15a3bc2a4aca6d64d536a3 345 Pfam PF00171 Aldehyde dehydrogenase family 2 310 1.4E-76 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APY29_RS11140 ff89bd3b34ee4878f01a5924e69bec0f 227 Pfam PF00005 ABC transporter 22 169 6.7E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS11140 ff89bd3b34ee4878f01a5924e69bec0f 227 SUPERFAMILY SSF52540 1 223 2.21E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11140 ff89bd3b34ee4878f01a5924e69bec0f 227 SMART SM00382 30 218 1.7E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS11140 ff89bd3b34ee4878f01a5924e69bec0f 227 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 1 220 8.7E-103 T 28-03-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 APY29_RS11140 ff89bd3b34ee4878f01a5924e69bec0f 227 Gene3D G3DSA:3.40.50.300 1 226 1.6E-57 T 28-03-2018 APY29_RS17915 f127e169afcbb31f7d669b8785a12710 707 Gene3D G3DSA:2.170.130.10 26 160 9.4E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS17915 f127e169afcbb31f7d669b8785a12710 707 Gene3D G3DSA:2.40.170.20 161 707 2.9E-60 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS17915 f127e169afcbb31f7d669b8785a12710 707 Pfam PF00593 TonB dependent receptor 236 704 1.1E-36 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS17915 f127e169afcbb31f7d669b8785a12710 707 SUPERFAMILY SSF56935 28 707 5.49E-78 T 28-03-2018 APY29_RS17915 f127e169afcbb31f7d669b8785a12710 707 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 150 1.3E-4 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS16915 1a09620808b6f9a5a9b399c94a6e0dfa 284 SUPERFAMILY SSF51430 14 273 5.11E-68 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS16915 1a09620808b6f9a5a9b399c94a6e0dfa 284 Gene3D G3DSA:3.20.20.100 8 284 5.7E-71 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS16915 1a09620808b6f9a5a9b399c94a6e0dfa 284 PRINTS PR00069 Aldo-keto reductase signature 206 230 2.7E-15 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APY29_RS16915 1a09620808b6f9a5a9b399c94a6e0dfa 284 PRINTS PR00069 Aldo-keto reductase signature 47 71 2.7E-15 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APY29_RS16915 1a09620808b6f9a5a9b399c94a6e0dfa 284 PRINTS PR00069 Aldo-keto reductase signature 102 120 2.7E-15 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APY29_RS16915 1a09620808b6f9a5a9b399c94a6e0dfa 284 PRINTS PR00069 Aldo-keto reductase signature 132 149 2.7E-15 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APY29_RS16915 1a09620808b6f9a5a9b399c94a6e0dfa 284 PIRSF PIRSF000097 120 278 4.2E-23 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APY29_RS16915 1a09620808b6f9a5a9b399c94a6e0dfa 284 PIRSF PIRSF000097 5 123 1.8E-15 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APY29_RS16915 1a09620808b6f9a5a9b399c94a6e0dfa 284 Pfam PF00248 Aldo/keto reductase family 23 271 2.3E-48 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS05540 cd281505b65443fa6ceed09727a12dca 488 Pfam PF02887 Pyruvate kinase, alpha/beta domain 360 473 4.9E-24 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 APY29_RS05540 cd281505b65443fa6ceed09727a12dca 488 PRINTS PR01050 Pyruvate kinase family signature 272 296 4.8E-56 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 APY29_RS05540 cd281505b65443fa6ceed09727a12dca 488 PRINTS PR01050 Pyruvate kinase family signature 63 79 4.8E-56 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 APY29_RS05540 cd281505b65443fa6ceed09727a12dca 488 PRINTS PR01050 Pyruvate kinase family signature 247 271 4.8E-56 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 APY29_RS05540 cd281505b65443fa6ceed09727a12dca 488 PRINTS PR01050 Pyruvate kinase family signature 190 204 4.8E-56 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 APY29_RS05540 cd281505b65443fa6ceed09727a12dca 488 PRINTS PR01050 Pyruvate kinase family signature 297 315 4.8E-56 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 APY29_RS05540 cd281505b65443fa6ceed09727a12dca 488 PRINTS PR01050 Pyruvate kinase family signature 220 246 4.8E-56 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 APY29_RS05540 cd281505b65443fa6ceed09727a12dca 488 PRINTS PR01050 Pyruvate kinase family signature 316 332 4.8E-56 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 APY29_RS05540 cd281505b65443fa6ceed09727a12dca 488 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 476 4.4E-157 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 APY29_RS05540 cd281505b65443fa6ceed09727a12dca 488 SUPERFAMILY SSF50800 74 171 4.54E-24 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain APY29_RS05540 cd281505b65443fa6ceed09727a12dca 488 Gene3D G3DSA:3.20.20.60 6 170 1.1E-33 T 28-03-2018 APY29_RS05540 cd281505b65443fa6ceed09727a12dca 488 Gene3D G3DSA:3.20.20.60 171 324 3.3E-55 T 28-03-2018 APY29_RS05540 cd281505b65443fa6ceed09727a12dca 488 Pfam PF00224 Pyruvate kinase, barrel domain 6 342 3.2E-122 T 28-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 APY29_RS05540 cd281505b65443fa6ceed09727a12dca 488 Gene3D G3DSA:3.40.1380.20 325 477 1.3E-43 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 APY29_RS05540 cd281505b65443fa6ceed09727a12dca 488 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 28-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 APY29_RS05540 cd281505b65443fa6ceed09727a12dca 488 SUPERFAMILY SSF52935 327 476 1.57E-34 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 APY29_RS05540 cd281505b65443fa6ceed09727a12dca 488 SUPERFAMILY SSF51621 171 342 5.93E-88 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APY29_RS05540 cd281505b65443fa6ceed09727a12dca 488 SUPERFAMILY SSF51621 4 79 5.93E-88 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APY29_RS14800 320c26329f0a635e4cf3bede3f62fb16 711 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 198 209 - T 28-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APY29_RS14800 320c26329f0a635e4cf3bede3f62fb16 711 SUPERFAMILY SSF53335 401 705 1.25E-58 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS14800 320c26329f0a635e4cf3bede3f62fb16 711 Pfam PF02926 THUMP domain 30 152 4.7E-10 T 28-03-2018 IPR004114 THUMP domain GO:0003723 APY29_RS14800 320c26329f0a635e4cf3bede3f62fb16 711 SMART SM00981 55 153 3.6E-21 T 28-03-2018 IPR004114 THUMP domain GO:0003723 APY29_RS14800 320c26329f0a635e4cf3bede3f62fb16 711 PIRSF PIRSF037618 1 711 2.2E-284 T 28-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APY29_RS14800 320c26329f0a635e4cf3bede3f62fb16 711 Gene3D G3DSA:3.40.50.150 93 401 2.4E-26 T 28-03-2018 APY29_RS14800 320c26329f0a635e4cf3bede3f62fb16 711 Gene3D G3DSA:3.40.50.150 495 711 2.8E-38 T 28-03-2018 APY29_RS14800 320c26329f0a635e4cf3bede3f62fb16 711 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 308 314 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APY29_RS14800 320c26329f0a635e4cf3bede3f62fb16 711 SUPERFAMILY SSF53335 262 375 1.32E-36 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS14800 320c26329f0a635e4cf3bede3f62fb16 711 SUPERFAMILY SSF53335 143 220 1.32E-36 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS14800 320c26329f0a635e4cf3bede3f62fb16 711 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 485 663 2.2E-15 T 28-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 APY29_RS14800 320c26329f0a635e4cf3bede3f62fb16 711 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 3 711 29.754 T 28-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APY29_RS14800 320c26329f0a635e4cf3bede3f62fb16 711 Pfam PF01170 Putative RNA methylase family UPF0020 161 372 4.9E-40 T 28-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APY29_RS17275 69d676d89601e573cfaa033eb5a1c298 160 Pfam PF08534 Redoxin 5 155 3.6E-33 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 APY29_RS17275 69d676d89601e573cfaa033eb5a1c298 160 Gene3D G3DSA:3.40.30.10 1 158 2.9E-26 T 28-03-2018 APY29_RS17275 69d676d89601e573cfaa033eb5a1c298 160 SUPERFAMILY SSF52833 1 157 3.22E-34 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS18190 cd79864761f07a9378ccd152493c0362 432 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 164 297 7.0E-46 T 28-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase APY29_RS18190 cd79864761f07a9378ccd152493c0362 432 PIRSF PIRSF000445 1 417 6.7E-146 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 APY29_RS18190 cd79864761f07a9378ccd152493c0362 432 SUPERFAMILY SSF69075 309 409 5.36E-23 T 28-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 APY29_RS18190 cd79864761f07a9378ccd152493c0362 432 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 148 3.0E-47 T 28-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 APY29_RS18190 cd79864761f07a9378ccd152493c0362 432 Gene3D G3DSA:1.10.1200.70 325 408 4.6E-17 T 28-03-2018 APY29_RS18190 cd79864761f07a9378ccd152493c0362 432 Gene3D G3DSA:3.40.50.720 153 305 5.0E-23 T 28-03-2018 APY29_RS18190 cd79864761f07a9378ccd152493c0362 432 SUPERFAMILY SSF69742 1 149 1.27E-46 T 28-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 APY29_RS18190 cd79864761f07a9378ccd152493c0362 432 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 403 1.6E-122 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 APY29_RS18190 cd79864761f07a9378ccd152493c0362 432 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 312 407 9.9E-19 T 28-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 APY29_RS18190 cd79864761f07a9378ccd152493c0362 432 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 410 29.176 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 APY29_RS18190 cd79864761f07a9378ccd152493c0362 432 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 91 114 - T 28-03-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 APY29_RS18190 cd79864761f07a9378ccd152493c0362 432 SUPERFAMILY SSF51735 154 306 1.14E-30 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS03060 f0ce891bcbc978ae4aa32617a72b436e 378 Pfam PF01476 LysM domain 32 77 2.3E-14 T 28-03-2018 IPR018392 LysM domain APY29_RS03060 f0ce891bcbc978ae4aa32617a72b436e 378 SMART SM00257 31 79 1.7E-6 T 28-03-2018 IPR018392 LysM domain APY29_RS03060 f0ce891bcbc978ae4aa32617a72b436e 378 Gene3D G3DSA:3.10.350.10 26 80 2.5E-16 T 28-03-2018 APY29_RS03060 f0ce891bcbc978ae4aa32617a72b436e 378 SUPERFAMILY SSF54106 30 78 1.11E-7 T 28-03-2018 IPR018392 LysM domain APY29_RS19060 d8e7479f89cdf3d3c9a38e9c4069bbc7 503 Pfam PF08245 Mur ligase middle domain 107 302 2.0E-43 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 APY29_RS19060 d8e7479f89cdf3d3c9a38e9c4069bbc7 503 Gene3D G3DSA:3.90.190.20 322 503 2.5E-45 T 28-03-2018 APY29_RS19060 d8e7479f89cdf3d3c9a38e9c4069bbc7 503 SUPERFAMILY SSF53623 102 319 2.09E-51 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 APY29_RS19060 d8e7479f89cdf3d3c9a38e9c4069bbc7 503 Pfam PF01225 Mur ligase family, catalytic domain 24 93 1.5E-8 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 APY29_RS19060 d8e7479f89cdf3d3c9a38e9c4069bbc7 503 SUPERFAMILY SSF63418 2 94 2.09E-22 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 APY29_RS19060 d8e7479f89cdf3d3c9a38e9c4069bbc7 503 SUPERFAMILY SSF53244 324 432 7.55E-26 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 APY29_RS19060 d8e7479f89cdf3d3c9a38e9c4069bbc7 503 Gene3D G3DSA:3.40.1190.10 91 319 1.1E-55 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 APY29_RS19060 d8e7479f89cdf3d3c9a38e9c4069bbc7 503 Gene3D G3DSA:3.40.1390.10 3 90 1.9E-24 T 28-03-2018 APY29_RS19060 d8e7479f89cdf3d3c9a38e9c4069bbc7 503 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 430 8.6E-125 T 28-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS19060 d8e7479f89cdf3d3c9a38e9c4069bbc7 503 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 402 3.1E-10 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 APY29_RS19060 d8e7479f89cdf3d3c9a38e9c4069bbc7 503 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 1 493 32.906 T 28-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS12765 4b2d8c40fe53d63d80b82b70190e9c2b 467 PIRSF PIRSF000774 1 459 2.7E-115 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APY29_RS12765 4b2d8c40fe53d63d80b82b70190e9c2b 467 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 349 368 - T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APY29_RS12765 4b2d8c40fe53d63d80b82b70190e9c2b 467 PRINTS PR00045 Sigma-54 factor signature 361 373 3.4E-27 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APY29_RS12765 4b2d8c40fe53d63d80b82b70190e9c2b 467 PRINTS PR00045 Sigma-54 factor signature 432 450 3.4E-27 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APY29_RS12765 4b2d8c40fe53d63d80b82b70190e9c2b 467 PRINTS PR00045 Sigma-54 factor signature 377 388 3.4E-27 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APY29_RS12765 4b2d8c40fe53d63d80b82b70190e9c2b 467 PRINTS PR00045 Sigma-54 factor signature 173 190 3.4E-27 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APY29_RS12765 4b2d8c40fe53d63d80b82b70190e9c2b 467 Pfam PF04552 Sigma-54, DNA binding domain 304 457 2.0E-57 T 28-03-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding APY29_RS12765 4b2d8c40fe53d63d80b82b70190e9c2b 467 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 437 444 - T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APY29_RS12765 4b2d8c40fe53d63d80b82b70190e9c2b 467 Gene3D G3DSA:1.10.10.10 307 399 1.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS12765 4b2d8c40fe53d63d80b82b70190e9c2b 467 Pfam PF04963 Sigma-54 factor, core binding domain 112 288 6.0E-32 T 28-03-2018 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 APY29_RS12765 4b2d8c40fe53d63d80b82b70190e9c2b 467 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 456 1.8E-109 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APY29_RS12765 4b2d8c40fe53d63d80b82b70190e9c2b 467 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 7 49 2.5E-12 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APY29_RS01225 a6cf29de362780520767ae48ea1280be 380 Gene3D G3DSA:1.10.10.10 18 82 2.7E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS01225 a6cf29de362780520767ae48ea1280be 380 Gene3D G3DSA:3.30.420.40 83 209 1.0E-16 T 28-03-2018 APY29_RS01225 a6cf29de362780520767ae48ea1280be 380 SUPERFAMILY SSF46785 19 86 5.18E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS01225 a6cf29de362780520767ae48ea1280be 380 Gene3D G3DSA:3.30.420.40 210 380 6.8E-25 T 28-03-2018 APY29_RS01225 a6cf29de362780520767ae48ea1280be 380 SUPERFAMILY SSF53067 90 375 5.02E-31 T 28-03-2018 APY29_RS01225 a6cf29de362780520767ae48ea1280be 380 Pfam PF00480 ROK family 93 249 4.3E-18 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 APY29_RS04715 013c3df8c9f088703940a26e1d7f0c35 225 SUPERFAMILY SSF52266 5 200 3.83E-29 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain APY29_RS04715 013c3df8c9f088703940a26e1d7f0c35 225 Gene3D G3DSA:3.40.50.1110 2 201 1.5E-27 T 28-03-2018 APY29_RS04715 013c3df8c9f088703940a26e1d7f0c35 225 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 12 192 1.6E-24 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain APY29_RS08465 83d010e69bb66db17963a42d0041ac7a 713 Pfam PF05649 Peptidase family M13 78 454 3.6E-93 T 28-03-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 APY29_RS08465 83d010e69bb66db17963a42d0041ac7a 713 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 537 553 2.5E-23 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS08465 83d010e69bb66db17963a42d0041ac7a 713 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 611 622 2.5E-23 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS08465 83d010e69bb66db17963a42d0041ac7a 713 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 516 528 2.5E-23 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS08465 83d010e69bb66db17963a42d0041ac7a 713 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 498 510 2.5E-23 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS08465 83d010e69bb66db17963a42d0041ac7a 713 Pfam PF01431 Peptidase family M13 506 710 4.3E-69 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS08465 83d010e69bb66db17963a42d0041ac7a 713 Gene3D G3DSA:3.40.390.10 373 713 4.2E-109 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APY29_RS08465 83d010e69bb66db17963a42d0041ac7a 713 Gene3D G3DSA:3.40.390.10 73 321 2.1E-10 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APY29_RS08465 83d010e69bb66db17963a42d0041ac7a 713 SUPERFAMILY SSF55486 68 713 3.22E-203 T 28-03-2018 APY29_RS10210 4d6b8649122bd69b4ae10c80301c10fb 239 Pfam PF13489 Methyltransferase domain 48 207 3.0E-28 T 28-03-2018 APY29_RS10210 4d6b8649122bd69b4ae10c80301c10fb 239 SUPERFAMILY SSF53335 18 234 1.74E-52 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS10210 4d6b8649122bd69b4ae10c80301c10fb 239 Gene3D G3DSA:3.40.50.150 1 239 2.7E-57 T 28-03-2018 APY29_RS10210 4d6b8649122bd69b4ae10c80301c10fb 239 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 14 239 39.787 T 28-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 APY29_RS10210 4d6b8649122bd69b4ae10c80301c10fb 239 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 233 2.1E-91 T 28-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 APY29_RS01355 6f942171db35103e60ad840c5da88685 192 Pfam PF12464 Maltose acetyltransferase 7 58 1.9E-10 T 28-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 APY29_RS01355 6f942171db35103e60ad840c5da88685 192 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 139 167 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 APY29_RS01355 6f942171db35103e60ad840c5da88685 192 SUPERFAMILY SSF51161 2 185 2.08E-53 T 28-03-2018 IPR011004 Trimeric LpxA-like APY29_RS01355 6f942171db35103e60ad840c5da88685 192 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 165 1.7E-9 T 28-03-2018 IPR001451 Hexapeptide repeat APY29_RS01355 6f942171db35103e60ad840c5da88685 192 Gene3D G3DSA:2.160.10.10 2 191 5.4E-52 T 28-03-2018 APY29_RS01355 6f942171db35103e60ad840c5da88685 192 SMART SM01266 5 59 1.1E-16 T 28-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 APY29_RS15480 87b7d79bb1c0f01309c16988280f2a03 716 SUPERFAMILY SSF55486 27 698 8.8E-176 T 28-03-2018 APY29_RS15480 87b7d79bb1c0f01309c16988280f2a03 716 Pfam PF01432 Peptidase family M3 244 698 8.8E-132 T 28-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 APY29_RS15480 87b7d79bb1c0f01309c16988280f2a03 716 Gene3D G3DSA:1.20.1050.40 24 159 3.5E-35 T 28-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal APY29_RS15480 87b7d79bb1c0f01309c16988280f2a03 716 Gene3D G3DSA:1.10.1370.10 160 398 4.3E-44 T 28-03-2018 APY29_RS15480 87b7d79bb1c0f01309c16988280f2a03 716 Gene3D G3DSA:1.10.1370.10 480 709 7.4E-60 T 28-03-2018 APY29_RS06580 c94b3d9b848a7310b631fbebf1d3feea 133 SUPERFAMILY SSF52172 13 131 2.7E-36 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS06580 c94b3d9b848a7310b631fbebf1d3feea 133 Pfam PF00072 Response regulator receiver domain 16 128 1.1E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS06580 c94b3d9b848a7310b631fbebf1d3feea 133 Gene3D G3DSA:3.40.50.2300 7 133 1.2E-35 T 28-03-2018 APY29_RS06580 c94b3d9b848a7310b631fbebf1d3feea 133 SMART SM00448 14 127 8.4E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS21355 fca505fa089dd8bf1cb5cb96161f6aae 493 Gene3D G3DSA:3.40.309.10 278 467 6.4E-61 T 28-03-2018 APY29_RS21355 fca505fa089dd8bf1cb5cb96161f6aae 493 Gene3D G3DSA:3.40.605.10 13 277 2.3E-86 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APY29_RS21355 fca505fa089dd8bf1cb5cb96161f6aae 493 SUPERFAMILY SSF53720 12 485 4.97E-145 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APY29_RS21355 fca505fa089dd8bf1cb5cb96161f6aae 493 Pfam PF00171 Aldehyde dehydrogenase family 26 481 2.3E-150 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APY29_RS21355 fca505fa089dd8bf1cb5cb96161f6aae 493 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 259 266 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APY29_RS21355 fca505fa089dd8bf1cb5cb96161f6aae 493 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 287 298 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APY29_RS13395 724cf943df9dbb68ae510a2e1925401c 256 Gene3D G3DSA:3.40.50.720 50 256 4.8E-51 T 28-03-2018 APY29_RS13395 724cf943df9dbb68ae510a2e1925401c 256 Gene3D G3DSA:3.40.50.720 2 49 1.0E-6 T 28-03-2018 APY29_RS13395 724cf943df9dbb68ae510a2e1925401c 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APY29_RS13395 724cf943df9dbb68ae510a2e1925401c 256 SUPERFAMILY SSF51735 7 252 6.49E-65 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS13395 724cf943df9dbb68ae510a2e1925401c 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 199 6.8E-4 T 28-03-2018 APY29_RS13395 724cf943df9dbb68ae510a2e1925401c 256 Pfam PF00106 short chain dehydrogenase 8 202 1.6E-47 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS13395 724cf943df9dbb68ae510a2e1925401c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.6E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS13395 724cf943df9dbb68ae510a2e1925401c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 9.6E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS13395 724cf943df9dbb68ae510a2e1925401c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 9.6E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS13395 724cf943df9dbb68ae510a2e1925401c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.4E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS13395 724cf943df9dbb68ae510a2e1925401c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.4E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS13395 724cf943df9dbb68ae510a2e1925401c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.4E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS13395 724cf943df9dbb68ae510a2e1925401c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.4E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS13395 724cf943df9dbb68ae510a2e1925401c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.4E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS13395 724cf943df9dbb68ae510a2e1925401c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.4E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17220 0a7f959d153c5543031095fb0fe1fde5 198 Gene3D G3DSA:1.10.10.60 5 66 6.6E-20 T 28-03-2018 APY29_RS17220 0a7f959d153c5543031095fb0fe1fde5 198 SUPERFAMILY SSF46689 6 73 2.88E-14 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS17220 0a7f959d153c5543031095fb0fe1fde5 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 65 1.0E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS17220 0a7f959d153c5543031095fb0fe1fde5 198 Gene3D G3DSA:1.10.357.10 67 191 8.3E-12 T 28-03-2018 APY29_RS17220 0a7f959d153c5543031095fb0fe1fde5 198 SUPERFAMILY SSF48498 87 190 6.04E-12 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APY29_RS17220 0a7f959d153c5543031095fb0fe1fde5 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 32 62 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APY29_RS17680 f70d182484a446751d45ba8a0f511c24 700 SUPERFAMILY SSF56024 335 511 2.83E-56 T 28-03-2018 APY29_RS17680 f70d182484a446751d45ba8a0f511c24 700 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 27 698 9.4E-281 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 APY29_RS17680 f70d182484a446751d45ba8a0f511c24 700 Hamap MF_00347 Polyphosphate kinase [ppk]. 25 699 28.76 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 APY29_RS17680 f70d182484a446751d45ba8a0f511c24 700 Gene3D G3DSA:3.30.870.10 339 518 3.2E-22 T 28-03-2018 APY29_RS17680 f70d182484a446751d45ba8a0f511c24 700 Pfam PF13089 Polyphosphate kinase N-terminal domain 27 131 2.4E-30 T 28-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 APY29_RS17680 f70d182484a446751d45ba8a0f511c24 700 Pfam PF13090 Polyphosphate kinase C-terminal domain 349 696 9.5E-150 T 28-03-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 APY29_RS17680 f70d182484a446751d45ba8a0f511c24 700 PIRSF PIRSF015589 7 700 2.2E-264 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 APY29_RS17680 f70d182484a446751d45ba8a0f511c24 700 Gene3D G3DSA:1.20.58.310 29 130 2.3E-31 T 28-03-2018 APY29_RS17680 f70d182484a446751d45ba8a0f511c24 700 Pfam PF02503 Polyphosphate kinase middle domain 141 342 8.5E-59 T 28-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 APY29_RS17680 f70d182484a446751d45ba8a0f511c24 700 Gene3D G3DSA:3.30.870.10 519 700 4.9E-33 T 28-03-2018 APY29_RS17680 f70d182484a446751d45ba8a0f511c24 700 SUPERFAMILY SSF56024 519 699 2.69E-69 T 28-03-2018 APY29_RS17680 f70d182484a446751d45ba8a0f511c24 700 SUPERFAMILY SSF140356 24 126 3.92E-34 T 28-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 APY29_RS17680 f70d182484a446751d45ba8a0f511c24 700 SUPERFAMILY SSF143724 130 335 2.55E-59 T 28-03-2018 APY29_RS17680 f70d182484a446751d45ba8a0f511c24 700 Gene3D G3DSA:3.30.1840.10 131 328 3.3E-58 T 28-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 APY29_RS12570 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 13 35 9.2E-74 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS12570 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 134 146 9.2E-74 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS12570 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 112 120 9.2E-74 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS12570 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 149 173 9.2E-74 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS12570 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 204 220 9.2E-74 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS12570 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 281 299 9.2E-74 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS12570 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 243 264 9.2E-74 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS12570 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 46 61 9.2E-74 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS12570 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 67 77 9.2E-74 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS12570 2336b5d66c54f7145f7537889b0f5b63 322 Gene3D G3DSA:3.50.50.60 4 132 8.8E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS12570 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 1.6E-37 T 28-03-2018 APY29_RS12570 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 1.6E-37 T 28-03-2018 APY29_RS12570 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 1.6E-37 T 28-03-2018 APY29_RS12570 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.6E-37 T 28-03-2018 APY29_RS12570 2336b5d66c54f7145f7537889b0f5b63 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 257 1.6E-37 T 28-03-2018 APY29_RS12570 2336b5d66c54f7145f7537889b0f5b63 322 SUPERFAMILY SSF51905 5 318 3.98E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS12570 2336b5d66c54f7145f7537889b0f5b63 322 Gene3D G3DSA:3.50.50.60 262 322 1.8E-7 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS12570 2336b5d66c54f7145f7537889b0f5b63 322 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 13 302 4.4E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS12570 2336b5d66c54f7145f7537889b0f5b63 322 Gene3D G3DSA:3.50.50.60 133 248 1.2E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS12570 2336b5d66c54f7145f7537889b0f5b63 322 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 141 161 - T 28-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 APY29_RS12570 2336b5d66c54f7145f7537889b0f5b63 322 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 13 318 7.2E-117 T 28-03-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Gene3D G3DSA:3.30.1300.30 2075 2179 2.2E-16 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 SUPERFAMILY SSF101967 51 208 8.89E-28 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 502 541 9.5E-8 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1245 1270 1.6E-8 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 184 218 9.7E-10 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 771 810 6.0E-9 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 914 953 4.0E-9 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1630 1669 1.2E-7 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1794 1825 5.4E-8 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 2046 2082 5.4E-7 T 28-03-2018 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Gene3D G3DSA:2.150.10.10 225 308 7.2E-11 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Gene3D G3DSA:2.150.10.10 1015 1091 2.4E-14 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Gene3D G3DSA:2.150.10.10 605 678 2.3E-15 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Gene3D G3DSA:2.150.10.10 940 1014 4.9E-9 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 SUPERFAMILY SSF101967 805 936 3.27E-30 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Gene3D G3DSA:2.150.10.10 1871 2074 8.1E-31 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Gene3D G3DSA:2.150.10.10 1663 1826 1.3E-29 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Gene3D G3DSA:2.150.10.10 395 530 1.3E-35 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Gene3D G3DSA:2.150.10.10 795 939 4.4E-34 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Gene3D G3DSA:2.150.10.10 1376 1466 1.7E-15 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Gene3D G3DSA:2.150.10.10 1184 1277 1.9E-25 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Gene3D G3DSA:2.150.10.10 52 216 1.5E-33 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 SUPERFAMILY SSF101967 1667 1818 1.83E-24 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Gene3D G3DSA:2.150.10.10 1467 1531 2.6E-10 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Gene3D G3DSA:2.150.10.10 531 604 1.5E-9 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Gene3D G3DSA:2.150.10.10 1532 1656 9.8E-23 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Gene3D G3DSA:2.150.10.10 1288 1375 5.5E-11 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Gene3D G3DSA:2.150.10.10 1092 1181 2.2E-18 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Gene3D G3DSA:2.150.10.10 679 794 7.3E-32 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 SUPERFAMILY SSF101967 955 1079 4.97E-16 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 SUPERFAMILY SSF101967 1479 1652 1.57E-28 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 SUPERFAMILY SSF101967 1076 1268 3.6E-38 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 SUPERFAMILY SSF101967 226 303 8.5E-10 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 SUPERFAMILY SSF101967 1364 1473 3.01E-13 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05658 Head domain of trimeric autotransporter adhesin 458 484 1.6E-6 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1958 1984 2.9E-4 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05658 Head domain of trimeric autotransporter adhesin 545 571 4.2E-4 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05658 Head domain of trimeric autotransporter adhesin 272 297 1.5E-4 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05658 Head domain of trimeric autotransporter adhesin 643 669 3.9E-4 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1013 1039 3.5E-4 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1481 1507 1.7E-4 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05658 Head domain of trimeric autotransporter adhesin 884 908 1.3E-4 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1187 1213 1.1E-6 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1746 1771 1.4E-4 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05658 Head domain of trimeric autotransporter adhesin 136 161 3.4E-4 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1715 1741 1.2E-6 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05658 Head domain of trimeric autotransporter adhesin 715 739 5.6E-6 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05658 Head domain of trimeric autotransporter adhesin 1125 1151 1.0E-5 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05658 Head domain of trimeric autotransporter adhesin 430 456 1.6E-5 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05658 Head domain of trimeric autotransporter adhesin 105 131 2.3E-7 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF05658 Head domain of trimeric autotransporter adhesin 872 896 2.5E-6 T 28-03-2018 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 SUPERFAMILY SSF54523 2057 2179 8.0E-13 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 SUPERFAMILY SSF101967 617 794 4.58E-39 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 SUPERFAMILY SSF101967 1920 2067 4.58E-27 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 SUPERFAMILY SSF101967 543 655 1.03E-16 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Gene3D G3DSA:2.150.10.10 309 388 3.1E-6 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 SUPERFAMILY SSF101967 309 386 1.26E-5 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 SUPERFAMILY SSF101967 400 526 3.01E-29 T 28-03-2018 APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 23 1.6E-8 T 28-03-2018 IPR024973 ESPR domain APY29_RS04445 6fafbfa006b8cd8840613ae159411d6a 2179 SUPERFAMILY SSF101967 1280 1402 2.62E-14 T 28-03-2018 APY29_RS21865 dbbf87f3574330bbc2226c83468fc32d 175 SMART SM00953 23 156 2.6E-16 T 28-03-2018 IPR014914 RES domain APY29_RS21865 dbbf87f3574330bbc2226c83468fc32d 175 Pfam PF08808 RES domain 10 163 3.4E-23 T 28-03-2018 IPR014914 RES domain APY29_RS18550 99f5d3b5cd2d035b6e0c087e293eaf17 143 Gene3D G3DSA:3.10.450.50 2 142 2.3E-22 T 28-03-2018 APY29_RS18550 99f5d3b5cd2d035b6e0c087e293eaf17 143 Pfam PF13577 SnoaL-like domain 10 132 1.7E-15 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain APY29_RS18550 99f5d3b5cd2d035b6e0c087e293eaf17 143 SUPERFAMILY SSF54427 7 138 1.28E-22 T 28-03-2018 IPR032710 NTF2-like domain APY29_RS20475 7b0454de5b15228770c59a0ddc40ac6e 125 Gene3D G3DSA:3.30.1190.10 29 92 1.2E-8 T 28-03-2018 APY29_RS20475 7b0454de5b15228770c59a0ddc40ac6e 125 Pfam PF01381 Helix-turn-helix 9 55 7.1E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APY29_RS20475 7b0454de5b15228770c59a0ddc40ac6e 125 SUPERFAMILY SSF47413 3 66 7.17E-12 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APY29_RS20475 7b0454de5b15228770c59a0ddc40ac6e 125 Gene3D G3DSA:1.10.10.60 93 124 0.13 T 28-03-2018 APY29_RS20475 7b0454de5b15228770c59a0ddc40ac6e 125 Gene3D G3DSA:1.10.10.60 3 28 6.7E-9 T 28-03-2018 APY29_RS20475 7b0454de5b15228770c59a0ddc40ac6e 125 SMART SM00530 7 63 2.2E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APY29_RS17815 303bdcc9aa26119ca69b93b3f1d7855e 402 Gene3D G3DSA:3.40.640.10 63 282 5.7E-42 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS17815 303bdcc9aa26119ca69b93b3f1d7855e 402 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 5 398 53.39 T 28-03-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 APY29_RS17815 303bdcc9aa26119ca69b93b3f1d7855e 402 SUPERFAMILY SSF53383 11 398 3.55E-116 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS17815 303bdcc9aa26119ca69b93b3f1d7855e 402 Pfam PF00155 Aminotransferase class I and II 46 390 6.9E-64 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APY29_RS17815 303bdcc9aa26119ca69b93b3f1d7855e 402 Gene3D G3DSA:3.90.1150.10 283 400 1.0E-37 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS17815 303bdcc9aa26119ca69b93b3f1d7855e 402 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 8 400 1.1E-225 T 28-03-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 APY29_RS22890 2d470761187d937fb518c11b3934b455 658 Gene3D G3DSA:3.40.50.300 135 273 2.5E-30 T 28-03-2018 APY29_RS22890 2d470761187d937fb518c11b3934b455 658 Gene3D G3DSA:3.40.50.300 1 134 4.2E-23 T 28-03-2018 APY29_RS22890 2d470761187d937fb518c11b3934b455 658 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 2 658 36.614 T 28-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 APY29_RS22890 2d470761187d937fb518c11b3934b455 658 Pfam PF13361 UvrD-like helicase C-terminal domain 485 603 5.5E-28 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APY29_RS22890 2d470761187d937fb518c11b3934b455 658 Pfam PF13361 UvrD-like helicase C-terminal domain 269 421 3.7E-30 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APY29_RS22890 2d470761187d937fb518c11b3934b455 658 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 263 1.8E-68 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 APY29_RS22890 2d470761187d937fb518c11b3934b455 658 Gene3D G3DSA:3.40.50.300 274 374 1.1E-24 T 28-03-2018 APY29_RS22890 2d470761187d937fb518c11b3934b455 658 Gene3D G3DSA:1.10.486.10 375 543 1.1E-35 T 28-03-2018 APY29_RS22890 2d470761187d937fb518c11b3934b455 658 SUPERFAMILY SSF52540 2 628 3.63E-159 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS21910 e97c1f70353d68cbe33986de90d10642 886 TIGRFAM TIGR04510 mod_pep_cyc: putative peptide modification system cyclase 17 832 0.0 T 28-03-2018 IPR030966 Putative peptide modification system cyclase APY29_RS21910 e97c1f70353d68cbe33986de90d10642 886 Gene3D G3DSA:3.40.50.10070 256 393 1.7E-8 T 28-03-2018 APY29_RS21910 e97c1f70353d68cbe33986de90d10642 886 SUPERFAMILY SSF48452 419 654 2.93E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS21910 e97c1f70353d68cbe33986de90d10642 886 Pfam PF14559 Tetratricopeptide repeat 563 614 9.2E-6 T 28-03-2018 APY29_RS21910 e97c1f70353d68cbe33986de90d10642 886 Gene3D G3DSA:1.25.40.10 570 598 0.15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS21910 e97c1f70353d68cbe33986de90d10642 886 Gene3D G3DSA:3.30.70.1230 5 206 4.5E-18 T 28-03-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 APY29_RS21910 e97c1f70353d68cbe33986de90d10642 886 Gene3D G3DSA:1.25.40.10 599 883 0.061 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS21910 e97c1f70353d68cbe33986de90d10642 886 SUPERFAMILY SSF55073 20 207 9.58E-22 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS21910 e97c1f70353d68cbe33986de90d10642 886 Pfam PF13174 Tetratricopeptide repeat 832 863 0.0092 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS21910 e97c1f70353d68cbe33986de90d10642 886 Gene3D G3DSA:1.25.40.10 412 569 1.6E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS07945 c523fb4647bb96cd1b1c230741e86ed9 302 Pfam PF12833 Helix-turn-helix domain 212 286 1.1E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS07945 c523fb4647bb96cd1b1c230741e86ed9 302 Pfam PF06719 AraC-type transcriptional regulator N-terminus 25 175 5.3E-47 T 28-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal APY29_RS07945 c523fb4647bb96cd1b1c230741e86ed9 302 SUPERFAMILY SSF46689 241 291 4.48E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS07945 c523fb4647bb96cd1b1c230741e86ed9 302 SUPERFAMILY SSF46689 189 238 4.36E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS07945 c523fb4647bb96cd1b1c230741e86ed9 302 Gene3D G3DSA:1.10.10.60 244 302 1.2E-10 T 28-03-2018 APY29_RS07945 c523fb4647bb96cd1b1c230741e86ed9 302 SMART SM00342 205 288 3.9E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS07945 c523fb4647bb96cd1b1c230741e86ed9 302 Gene3D G3DSA:1.10.10.60 137 243 4.5E-15 T 28-03-2018 APY29_RS10010 465d68211d943e150f1465950c2ea9a9 363 Pfam PF01612 3'-5' exonuclease 8 168 3.0E-28 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APY29_RS10010 465d68211d943e150f1465950c2ea9a9 363 Pfam PF00570 HRDC domain 213 258 4.1E-5 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 APY29_RS10010 465d68211d943e150f1465950c2ea9a9 363 SUPERFAMILY SSF47819 193 282 5.23E-15 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 APY29_RS10010 465d68211d943e150f1465950c2ea9a9 363 Gene3D G3DSA:3.30.420.10 3 191 2.5E-34 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS10010 465d68211d943e150f1465950c2ea9a9 363 Gene3D G3DSA:1.10.150.80 192 299 6.3E-11 T 28-03-2018 APY29_RS10010 465d68211d943e150f1465950c2ea9a9 363 SMART SM00474 2 169 4.5E-31 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APY29_RS10010 465d68211d943e150f1465950c2ea9a9 363 SUPERFAMILY SSF47819 293 360 2.88E-11 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 APY29_RS10010 465d68211d943e150f1465950c2ea9a9 363 TIGRFAM TIGR01388 rnd: ribonuclease D 4 358 1.0E-118 T 28-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 APY29_RS10010 465d68211d943e150f1465950c2ea9a9 363 SUPERFAMILY SSF53098 3 192 4.17E-55 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS10010 465d68211d943e150f1465950c2ea9a9 363 Hamap MF_01899 Ribonuclease D [rnd]. 2 359 36.662 T 28-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 APY29_RS18820 acf1f4e92477515969983a85d1b5825e 322 Gene3D G3DSA:3.20.20.100 3 322 5.5E-91 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS18820 acf1f4e92477515969983a85d1b5825e 322 SUPERFAMILY SSF51430 1 319 9.17E-94 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS18820 acf1f4e92477515969983a85d1b5825e 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 164 183 1.8E-12 T 28-03-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 APY29_RS18820 acf1f4e92477515969983a85d1b5825e 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 236 248 1.8E-12 T 28-03-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 APY29_RS18820 acf1f4e92477515969983a85d1b5825e 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 113 123 1.8E-12 T 28-03-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 APY29_RS18820 acf1f4e92477515969983a85d1b5825e 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 208 214 1.8E-12 T 28-03-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 APY29_RS18820 acf1f4e92477515969983a85d1b5825e 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 275 288 1.8E-12 T 28-03-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 APY29_RS18820 acf1f4e92477515969983a85d1b5825e 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 262 274 1.8E-12 T 28-03-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 APY29_RS18820 acf1f4e92477515969983a85d1b5825e 322 Pfam PF00248 Aldo/keto reductase family 16 318 1.6E-72 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS16075 9a4f1d566bf3820e793bb8142e1b8929 534 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 2 532 8.4E-187 T 28-03-2018 IPR026333 ATP-dependent DNA ligase, PP_1105 family APY29_RS16075 9a4f1d566bf3820e793bb8142e1b8929 534 SUPERFAMILY SSF56091 206 408 3.74E-54 T 28-03-2018 APY29_RS16075 9a4f1d566bf3820e793bb8142e1b8929 534 SUPERFAMILY SSF50249 413 532 2.06E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS16075 9a4f1d566bf3820e793bb8142e1b8929 534 Gene3D G3DSA:3.30.1490.70 338 409 1.6E-21 T 28-03-2018 APY29_RS16075 9a4f1d566bf3820e793bb8142e1b8929 534 Pfam PF01068 ATP dependent DNA ligase domain 212 408 2.8E-33 T 28-03-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 APY29_RS16075 9a4f1d566bf3820e793bb8142e1b8929 534 Pfam PF04679 ATP dependent DNA ligase C terminal region 429 518 3.3E-8 T 28-03-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 APY29_RS16075 9a4f1d566bf3820e793bb8142e1b8929 534 Pfam PF04675 DNA ligase N terminus 3 166 3.0E-19 T 28-03-2018 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 APY29_RS16075 9a4f1d566bf3820e793bb8142e1b8929 534 Gene3D G3DSA:2.40.50.140 412 534 3.5E-22 T 28-03-2018 APY29_RS16075 9a4f1d566bf3820e793bb8142e1b8929 534 Gene3D G3DSA:1.10.3260.10 2 337 1.2E-27 T 28-03-2018 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 APY29_RS05275 3983fe93f55e33536d93bee316dac34b 241 Gene3D G3DSA:3.30.230.70 2 241 4.1E-59 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 APY29_RS05275 3983fe93f55e33536d93bee316dac34b 241 SUPERFAMILY SSF54211 5 184 1.97E-45 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS05275 3983fe93f55e33536d93bee316dac34b 241 SUPERFAMILY SSF55666 156 239 1.09E-24 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 APY29_RS05275 3983fe93f55e33536d93bee316dac34b 241 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 5 239 5.8E-115 T 28-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 APY29_RS05275 3983fe93f55e33536d93bee316dac34b 241 Pfam PF03725 3' exoribonuclease family, domain 2 161 227 1.9E-9 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 APY29_RS05275 3983fe93f55e33536d93bee316dac34b 241 Pfam PF01138 3' exoribonuclease family, domain 1 13 143 1.8E-22 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 APY29_RS05275 3983fe93f55e33536d93bee316dac34b 241 Hamap MF_00564 Ribonuclease PH [rph]. 4 240 50.052 T 28-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 APY29_RS05275 3983fe93f55e33536d93bee316dac34b 241 ProSitePatterns PS01277 Ribonuclease PH signature. 119 132 - T 28-03-2018 IPR018336 Ribonuclease PH, conserved site APY29_RS14105 9857c8addd82f7c58468a67d13c94421 554 Gene3D G3DSA:3.40.50.880 287 546 4.4E-65 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS14105 9857c8addd82f7c58468a67d13c94421 554 SUPERFAMILY SSF52540 2 266 7.31E-118 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS14105 9857c8addd82f7c58468a67d13c94421 554 Pfam PF06418 CTP synthase N-terminus 5 265 3.1E-121 T 28-03-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 APY29_RS14105 9857c8addd82f7c58468a67d13c94421 554 SUPERFAMILY SSF52317 290 542 9.03E-80 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS14105 9857c8addd82f7c58468a67d13c94421 554 TIGRFAM TIGR00337 PyrG: CTP synthase 4 538 1.7E-238 T 28-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 APY29_RS14105 9857c8addd82f7c58468a67d13c94421 554 Hamap MF_01227 CTP synthase [pyrG]. 2 543 50.934 T 28-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 APY29_RS14105 9857c8addd82f7c58468a67d13c94421 554 Gene3D G3DSA:3.40.50.300 1 286 2.4E-124 T 28-03-2018 APY29_RS14105 9857c8addd82f7c58468a67d13c94421 554 Pfam PF00117 Glutamine amidotransferase class-I 303 537 9.6E-53 T 28-03-2018 IPR017926 Glutamine amidotransferase APY29_RS12955 f0ad6d35347652ad7a9e524688a2efd5 255 SUPERFAMILY SSF88659 170 241 2.06E-19 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS12955 f0ad6d35347652ad7a9e524688a2efd5 255 Pfam PF04542 Sigma-70 region 2 25 96 3.0E-17 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS12955 f0ad6d35347652ad7a9e524688a2efd5 255 Gene3D G3DSA:1.10.10.10 184 244 4.2E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS12955 f0ad6d35347652ad7a9e524688a2efd5 255 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 25 242 2.4E-80 T 28-03-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APY29_RS12955 f0ad6d35347652ad7a9e524688a2efd5 255 SUPERFAMILY SSF88946 20 96 2.88E-24 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS12955 f0ad6d35347652ad7a9e524688a2efd5 255 Pfam PF04539 Sigma-70 region 3 107 177 9.2E-13 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS12955 f0ad6d35347652ad7a9e524688a2efd5 255 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 10 244 64.846 T 28-03-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APY29_RS12955 f0ad6d35347652ad7a9e524688a2efd5 255 PRINTS PR00046 Major sigma-70 factor signature 226 237 2.4E-11 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS12955 f0ad6d35347652ad7a9e524688a2efd5 255 PRINTS PR00046 Major sigma-70 factor signature 211 226 2.4E-11 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS12955 f0ad6d35347652ad7a9e524688a2efd5 255 PRINTS PR00046 Major sigma-70 factor signature 51 64 2.4E-11 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS12955 f0ad6d35347652ad7a9e524688a2efd5 255 PRINTS PR00046 Major sigma-70 factor signature 194 206 2.4E-11 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS12955 f0ad6d35347652ad7a9e524688a2efd5 255 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 240 2.7E-33 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS12955 f0ad6d35347652ad7a9e524688a2efd5 255 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 211 237 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS12955 f0ad6d35347652ad7a9e524688a2efd5 255 SUPERFAMILY SSF88659 97 163 3.18E-11 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS12955 f0ad6d35347652ad7a9e524688a2efd5 255 Gene3D G3DSA:1.10.10.10 97 147 1.7E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS12955 f0ad6d35347652ad7a9e524688a2efd5 255 Gene3D G3DSA:1.10.1740.10 8 94 7.4E-21 T 28-03-2018 APY29_RS12955 f0ad6d35347652ad7a9e524688a2efd5 255 PIRSF PIRSF000770 1 246 5.4E-40 T 28-03-2018 APY29_RS12955 f0ad6d35347652ad7a9e524688a2efd5 255 Pfam PF04545 Sigma-70, region 4 190 238 1.3E-17 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS12485 22c33319fafd5c5828c9d46a56b84235 465 SMART SM00382 177 325 0.13 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS12485 22c33319fafd5c5828c9d46a56b84235 465 SMART SM00382 1 148 3.8 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS12485 22c33319fafd5c5828c9d46a56b84235 465 SUPERFAMILY SSF52540 1 166 2.99E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS12485 22c33319fafd5c5828c9d46a56b84235 465 Gene3D G3DSA:1.20.120.430 69 248 2.4E-49 T 28-03-2018 APY29_RS12485 22c33319fafd5c5828c9d46a56b84235 465 Gene3D G3DSA:1.20.120.430 249 360 1.5E-13 T 28-03-2018 APY29_RS12485 22c33319fafd5c5828c9d46a56b84235 465 SUPERFAMILY SSF52540 139 440 3.83E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS12485 22c33319fafd5c5828c9d46a56b84235 465 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 356 434 1.2E-23 T 28-03-2018 IPR032859 GTPase Der, C-terminal KH-domain-like APY29_RS12485 22c33319fafd5c5828c9d46a56b84235 465 Gene3D G3DSA:1.20.120.430 3 68 4.2E-14 T 28-03-2018 APY29_RS12485 22c33319fafd5c5828c9d46a56b84235 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 1.7E-8 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS12485 22c33319fafd5c5828c9d46a56b84235 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.7E-8 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS12485 22c33319fafd5c5828c9d46a56b84235 465 Gene3D G3DSA:3.30.300.20 361 435 2.0E-25 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta APY29_RS12485 22c33319fafd5c5828c9d46a56b84235 465 Hamap MF_00195 GTPase Der [der]. 2 437 36.841 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 APY29_RS12485 22c33319fafd5c5828c9d46a56b84235 465 Pfam PF01926 50S ribosome-binding GTPase 180 298 6.7E-24 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS12485 22c33319fafd5c5828c9d46a56b84235 465 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.2E-26 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS12485 22c33319fafd5c5828c9d46a56b84235 465 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 434 7.9E-166 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 APY29_RS12485 22c33319fafd5c5828c9d46a56b84235 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 179 344 3.7E-26 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 APY29_RS12485 22c33319fafd5c5828c9d46a56b84235 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 159 6.4E-25 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 APY29_RS12485 22c33319fafd5c5828c9d46a56b84235 465 PIRSF PIRSF006485 1 442 2.7E-167 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 APY29_RS21195 225f70b6d1e08f378cb681f3c8d47e4c 253 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 1 250 41.638 T 28-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 APY29_RS21195 225f70b6d1e08f378cb681f3c8d47e4c 253 SUPERFAMILY SSF53474 2 249 2.3E-42 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS21195 225f70b6d1e08f378cb681f3c8d47e4c 253 Pfam PF12697 Alpha/beta hydrolase family 12 244 4.0E-19 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS21195 225f70b6d1e08f378cb681f3c8d47e4c 253 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 8 249 1.5E-88 T 28-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 APY29_RS21195 225f70b6d1e08f378cb681f3c8d47e4c 253 Gene3D G3DSA:3.40.50.1820 1 252 4.5E-41 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS13230 e160f339351cdeff7c0abebe3ad6c3c5 136 Gene3D G3DSA:3.40.50.1010 1 130 9.7E-14 T 28-03-2018 IPR029060 PIN domain-like APY29_RS13230 e160f339351cdeff7c0abebe3ad6c3c5 136 Pfam PF01850 PIN domain 3 121 1.2E-7 T 28-03-2018 IPR002716 PIN domain APY29_RS13230 e160f339351cdeff7c0abebe3ad6c3c5 136 SUPERFAMILY SSF88723 1 122 4.77E-13 T 28-03-2018 IPR029060 PIN domain-like APY29_RS17450 f15e8174f7c97be02cac13c9656031ae 318 Pfam PF01882 Protein of unknown function DUF58 211 288 7.7E-15 T 28-03-2018 IPR002881 Domain of unknown function DUF58 APY29_RS22405 1e2d7ba5569a91088cd69b4a47a1e3ed 355 Gene3D G3DSA:1.10.10.60 4 35 3.6E-4 T 28-03-2018 APY29_RS22405 1e2d7ba5569a91088cd69b4a47a1e3ed 355 Pfam PF13377 Periplasmic binding protein-like domain 191 350 1.5E-35 T 28-03-2018 APY29_RS22405 1e2d7ba5569a91088cd69b4a47a1e3ed 355 SUPERFAMILY SSF47413 22 80 1.48E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APY29_RS22405 1e2d7ba5569a91088cd69b4a47a1e3ed 355 Gene3D G3DSA:3.40.50.2300 79 198 3.4E-20 T 28-03-2018 APY29_RS22405 1e2d7ba5569a91088cd69b4a47a1e3ed 355 Gene3D G3DSA:3.40.50.2300 199 329 7.8E-43 T 28-03-2018 APY29_RS22405 1e2d7ba5569a91088cd69b4a47a1e3ed 355 Pfam PF00356 Bacterial regulatory proteins, lacI family 24 69 7.3E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS22405 1e2d7ba5569a91088cd69b4a47a1e3ed 355 Gene3D G3DSA:1.10.260.40 36 78 1.0E-19 T 28-03-2018 APY29_RS22405 1e2d7ba5569a91088cd69b4a47a1e3ed 355 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 34 44 1.9E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS22405 1e2d7ba5569a91088cd69b4a47a1e3ed 355 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 24 34 1.9E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS22405 1e2d7ba5569a91088cd69b4a47a1e3ed 355 SMART SM00354 22 92 5.1E-25 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS22405 1e2d7ba5569a91088cd69b4a47a1e3ed 355 ProSitePatterns PS00356 LacI-type HTH domain signature. 25 43 - T 28-03-2018 APY29_RS22405 1e2d7ba5569a91088cd69b4a47a1e3ed 355 SUPERFAMILY SSF53822 83 353 3.46E-61 T 28-03-2018 IPR028082 Periplasmic binding protein-like I APY29_RS00290 3327cd111405fe82cd8f241f294c2960 381 Pfam PF13439 Glycosyltransferase Family 4 13 173 1.5E-20 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 APY29_RS00290 3327cd111405fe82cd8f241f294c2960 381 Pfam PF00534 Glycosyl transferases group 1 188 342 2.4E-27 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 APY29_RS00290 3327cd111405fe82cd8f241f294c2960 381 Gene3D G3DSA:3.40.50.2000 8 184 5.4E-12 T 28-03-2018 APY29_RS00290 3327cd111405fe82cd8f241f294c2960 381 Gene3D G3DSA:3.40.50.2000 185 351 6.6E-36 T 28-03-2018 APY29_RS00290 3327cd111405fe82cd8f241f294c2960 381 SUPERFAMILY SSF53756 2 366 4.19E-71 T 28-03-2018 APY29_RS11650 a7671f235bdf9f146ae8d7495d2340b7 177 Pfam PF11358 Protein of unknown function (DUF3158) 13 167 1.7E-71 T 28-03-2018 IPR021502 Protein of unknown function DUF3158 APY29_RS22410 e1baf69bc35198f279c29daf89b01ad6 527 SUPERFAMILY SSF49899 344 524 6.73E-26 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain APY29_RS22410 e1baf69bc35198f279c29daf89b01ad6 527 SUPERFAMILY SSF75005 47 324 1.8E-78 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APY29_RS22410 e1baf69bc35198f279c29daf89b01ad6 527 Gene3D G3DSA:2.60.120.200 342 527 6.4E-25 T 28-03-2018 APY29_RS22410 e1baf69bc35198f279c29daf89b01ad6 527 Gene3D G3DSA:2.115.10.20 46 334 1.3E-68 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APY29_RS22410 e1baf69bc35198f279c29daf89b01ad6 527 Pfam PF04616 Glycosyl hydrolases family 43 48 320 5.6E-92 T 28-03-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APY29_RS23160 42332f358fd9dfbf400d089b6abd759f 1134 Gene3D G3DSA:1.10.486.10 422 631 2.2E-54 T 28-03-2018 APY29_RS23160 42332f358fd9dfbf400d089b6abd759f 1134 SUPERFAMILY SSF52540 345 791 8.92E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23160 42332f358fd9dfbf400d089b6abd759f 1134 SUPERFAMILY SSF52540 9 332 2.81E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23160 42332f358fd9dfbf400d089b6abd759f 1134 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 8 1112 16.845 T 28-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 APY29_RS23160 42332f358fd9dfbf400d089b6abd759f 1134 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 9 787 5.0E-211 T 28-03-2018 APY29_RS23160 42332f358fd9dfbf400d089b6abd759f 1134 Gene3D G3DSA:1.10.10.160 93 185 9.7E-13 T 28-03-2018 APY29_RS23160 42332f358fd9dfbf400d089b6abd759f 1134 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 9 1068 0.0 T 28-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 APY29_RS23160 42332f358fd9dfbf400d089b6abd759f 1134 PIRSF PIRSF000980 8 1114 0.0 T 28-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 APY29_RS23160 42332f358fd9dfbf400d089b6abd759f 1134 SUPERFAMILY SSF52980 803 1105 4.02E-53 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 APY29_RS15925 b5e80a79912cd436ea5efe85a86b0c7e 201 SUPERFAMILY SSF109604 19 195 6.8E-14 T 28-03-2018 APY29_RS15925 b5e80a79912cd436ea5efe85a86b0c7e 201 PIRSF PIRSF035170 5 201 6.2E-74 T 28-03-2018 IPR009218 Predicted HD phosphohydrolase APY29_RS15925 b5e80a79912cd436ea5efe85a86b0c7e 201 Gene3D G3DSA:1.10.472.50 10 106 4.3E-9 T 28-03-2018 APY29_RS07645 3edb3bf7aa6e9122e48e54ed11b4e19b 493 SMART SM00267 318 492 8.1E-44 T 28-03-2018 IPR000160 GGDEF domain APY29_RS07645 3edb3bf7aa6e9122e48e54ed11b4e19b 493 Gene3D G3DSA:3.30.70.270 313 471 9.2E-43 T 28-03-2018 APY29_RS07645 3edb3bf7aa6e9122e48e54ed11b4e19b 493 SUPERFAMILY SSF55073 334 463 1.41E-38 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS07645 3edb3bf7aa6e9122e48e54ed11b4e19b 493 Gene3D G3DSA:3.30.450.20 39 173 3.8E-19 T 28-03-2018 APY29_RS07645 3edb3bf7aa6e9122e48e54ed11b4e19b 493 Gene3D G3DSA:3.30.450.20 174 292 3.3E-13 T 28-03-2018 APY29_RS07645 3edb3bf7aa6e9122e48e54ed11b4e19b 493 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 326 464 4.2E-39 T 28-03-2018 IPR000160 GGDEF domain APY29_RS07645 3edb3bf7aa6e9122e48e54ed11b4e19b 493 Pfam PF00990 Diguanylate cyclase, GGDEF domain 329 463 6.4E-40 T 28-03-2018 IPR000160 GGDEF domain APY29_RS07645 3edb3bf7aa6e9122e48e54ed11b4e19b 493 Pfam PF02743 Cache domain 44 227 6.9E-18 T 28-03-2018 IPR033479 Double Cache domain 1 APY29_RS04805 3aac84f23df21644bd43841c179cf9d1 343 Gene3D G3DSA:1.10.260.40 28 69 8.6E-20 T 28-03-2018 APY29_RS04805 3aac84f23df21644bd43841c179cf9d1 343 Pfam PF13377 Periplasmic binding protein-like domain 185 342 3.4E-38 T 28-03-2018 APY29_RS04805 3aac84f23df21644bd43841c179cf9d1 343 SUPERFAMILY SSF53822 87 342 3.34E-58 T 28-03-2018 IPR028082 Periplasmic binding protein-like I APY29_RS04805 3aac84f23df21644bd43841c179cf9d1 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 16 34 - T 28-03-2018 APY29_RS04805 3aac84f23df21644bd43841c179cf9d1 343 Gene3D G3DSA:3.40.50.2300 70 183 3.2E-22 T 28-03-2018 APY29_RS04805 3aac84f23df21644bd43841c179cf9d1 343 Gene3D G3DSA:3.40.50.2300 184 343 3.8E-47 T 28-03-2018 APY29_RS04805 3aac84f23df21644bd43841c179cf9d1 343 SUPERFAMILY SSF47413 13 72 1.97E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APY29_RS04805 3aac84f23df21644bd43841c179cf9d1 343 SMART SM00354 13 83 5.5E-15 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS04805 3aac84f23df21644bd43841c179cf9d1 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 16 58 2.5E-11 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS04805 3aac84f23df21644bd43841c179cf9d1 343 Gene3D G3DSA:1.10.10.10 1 27 7.7E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS06950 1029dee9aa957bcfd958f997bf804c41 460 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 457 1.7E-217 T 28-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 APY29_RS06950 1029dee9aa957bcfd958f997bf804c41 460 Gene3D G3DSA:3.30.1330.90 11 161 3.9E-55 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 APY29_RS06950 1029dee9aa957bcfd958f997bf804c41 460 Pfam PF03313 Serine dehydratase alpha chain 189 454 1.9E-105 T 28-03-2018 IPR005130 Serine dehydratase-like, alpha subunit APY29_RS06950 1029dee9aa957bcfd958f997bf804c41 460 Gene3D G3DSA:1.10.4100.10 270 449 3.7E-33 T 28-03-2018 APY29_RS06950 1029dee9aa957bcfd958f997bf804c41 460 Pfam PF03315 Serine dehydratase beta chain 4 158 1.4E-58 T 28-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 APY29_RS06950 1029dee9aa957bcfd958f997bf804c41 460 SUPERFAMILY SSF143548 17 158 3.66E-44 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 APY29_RS10155 59de38a8c8baf31ab31dedb72560a848 141 SUPERFAMILY SSF52038 40 130 3.01E-23 T 28-03-2018 IPR000468 Barstar (barnase inhibitor) APY29_RS10155 59de38a8c8baf31ab31dedb72560a848 141 Gene3D G3DSA:3.30.370.10 38 131 7.4E-20 T 28-03-2018 IPR000468 Barstar (barnase inhibitor) APY29_RS10155 59de38a8c8baf31ab31dedb72560a848 141 Pfam PF01337 Barstar (barnase inhibitor) 43 125 6.1E-24 T 28-03-2018 IPR000468 Barstar (barnase inhibitor) APY29_RS05505 0e57d6f062b160ec324ba2228b00b28b 333 Gene3D G3DSA:3.40.50.720 1 161 8.1E-82 T 28-03-2018 APY29_RS05505 0e57d6f062b160ec324ba2228b00b28b 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 5.2E-47 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05505 0e57d6f062b160ec324ba2228b00b28b 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 5.2E-47 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05505 0e57d6f062b160ec324ba2228b00b28b 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 5.2E-47 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05505 0e57d6f062b160ec324ba2228b00b28b 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 5.2E-47 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05505 0e57d6f062b160ec324ba2228b00b28b 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 5.2E-47 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05505 0e57d6f062b160ec324ba2228b00b28b 333 Gene3D G3DSA:3.30.360.10 162 316 1.5E-76 T 28-03-2018 APY29_RS05505 0e57d6f062b160ec324ba2228b00b28b 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 5.3E-134 T 28-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05505 0e57d6f062b160ec324ba2228b00b28b 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 28-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05505 0e57d6f062b160ec324ba2228b00b28b 333 SUPERFAMILY SSF55347 151 314 1.01E-73 T 28-03-2018 APY29_RS05505 0e57d6f062b160ec324ba2228b00b28b 333 PIRSF PIRSF000149 1 333 2.4E-131 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05505 0e57d6f062b160ec324ba2228b00b28b 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 2.7E-39 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05505 0e57d6f062b160ec324ba2228b00b28b 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 5.1E-65 T 28-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS05505 0e57d6f062b160ec324ba2228b00b28b 333 SUPERFAMILY SSF51735 3 168 1.25E-67 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS05505 0e57d6f062b160ec324ba2228b00b28b 333 SMART SM00846 3 152 5.2E-99 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 APY29_RS22760 3ffe049db1c094f7e12e5b7b65fef8e9 177 Gene3D G3DSA:2.40.128.20 2 176 3.2E-27 T 28-03-2018 IPR012674 Calycin APY29_RS22760 3ffe049db1c094f7e12e5b7b65fef8e9 177 PRINTS PR01171 Bacterial lipocalin signature 136 147 1.2E-9 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 APY29_RS22760 3ffe049db1c094f7e12e5b7b65fef8e9 177 PRINTS PR01171 Bacterial lipocalin signature 33 47 1.2E-9 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 APY29_RS22760 3ffe049db1c094f7e12e5b7b65fef8e9 177 PRINTS PR01171 Bacterial lipocalin signature 163 173 1.2E-9 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 APY29_RS22760 3ffe049db1c094f7e12e5b7b65fef8e9 177 PRINTS PR01171 Bacterial lipocalin signature 50 66 1.2E-9 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 APY29_RS22760 3ffe049db1c094f7e12e5b7b65fef8e9 177 PRINTS PR01171 Bacterial lipocalin signature 104 118 1.2E-9 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 APY29_RS22760 3ffe049db1c094f7e12e5b7b65fef8e9 177 Pfam PF08212 Lipocalin-like domain 33 174 5.8E-44 T 28-03-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain APY29_RS22760 3ffe049db1c094f7e12e5b7b65fef8e9 177 PIRSF PIRSF036893 1 177 1.1E-39 T 28-03-2018 IPR022271 Lipocalin, ApoD type APY29_RS22760 3ffe049db1c094f7e12e5b7b65fef8e9 177 SUPERFAMILY SSF50814 8 174 1.96E-32 T 28-03-2018 IPR012674 Calycin APY29_RS03260 b72cda309c94af17c49fcc2348d50ee9 94 SUPERFAMILY SSF54909 1 84 4.29E-12 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel APY29_RS03260 b72cda309c94af17c49fcc2348d50ee9 94 Gene3D G3DSA:3.30.70.1060 2 91 1.8E-13 T 28-03-2018 APY29_RS03260 b72cda309c94af17c49fcc2348d50ee9 94 Pfam PF03795 YCII-related domain 1 74 2.8E-5 T 28-03-2018 IPR005545 YCII-related APY29_RS17300 93a845edb72bc75677c9b2d0c7126da6 1640 Gene3D G3DSA:1.50.10.20 1149 1416 2.7E-22 T 28-03-2018 APY29_RS17300 93a845edb72bc75677c9b2d0c7126da6 1640 Gene3D G3DSA:2.60.40.10 625 1002 0.18 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS17300 93a845edb72bc75677c9b2d0c7126da6 1640 Pfam PF00207 Alpha-2-macroglobulin family 956 1041 4.1E-7 T 28-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 APY29_RS17300 93a845edb72bc75677c9b2d0c7126da6 1640 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 286 380 2.3E-23 T 28-03-2018 APY29_RS17300 93a845edb72bc75677c9b2d0c7126da6 1640 Gene3D G3DSA:2.60.40.10 388 482 3.3E-4 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS17300 93a845edb72bc75677c9b2d0c7126da6 1640 SUPERFAMILY SSF48239 1155 1412 1.33E-28 T 28-03-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APY29_RS17300 93a845edb72bc75677c9b2d0c7126da6 1640 PIRSF PIRSF038980 6 1639 0.0 T 28-03-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria APY29_RS17300 93a845edb72bc75677c9b2d0c7126da6 1640 SMART SM01359 746 889 2.5E-31 T 28-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 APY29_RS17300 93a845edb72bc75677c9b2d0c7126da6 1640 Gene3D G3DSA:2.60.120.430 1007 1105 0.0017 T 28-03-2018 APY29_RS17300 93a845edb72bc75677c9b2d0c7126da6 1640 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 747 889 7.4E-14 T 28-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 APY29_RS17300 93a845edb72bc75677c9b2d0c7126da6 1640 SMART SM01360 953 1042 1.5E-23 T 28-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 APY29_RS17300 93a845edb72bc75677c9b2d0c7126da6 1640 Pfam PF01835 MG2 domain 386 474 1.4E-16 T 28-03-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 APY29_RS04340 54bd5816046e009e67a14bd8ee7a9b79 157 Pfam PF00583 Acetyltransferase (GNAT) family 18 125 1.4E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 APY29_RS04340 54bd5816046e009e67a14bd8ee7a9b79 157 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 16 147 1.4E-42 T 28-03-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 APY29_RS04340 54bd5816046e009e67a14bd8ee7a9b79 157 Gene3D G3DSA:3.40.630.30 7 153 7.1E-37 T 28-03-2018 APY29_RS04340 54bd5816046e009e67a14bd8ee7a9b79 157 SUPERFAMILY SSF55729 8 150 2.19E-36 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS17080 c69ae3cea6e2b0ca5f5f5b83231b3989 842 SUPERFAMILY SSF52540 148 282 1.03E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17080 c69ae3cea6e2b0ca5f5f5b83231b3989 842 SUPERFAMILY SSF52540 340 458 1.03E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17080 c69ae3cea6e2b0ca5f5f5b83231b3989 842 SUPERFAMILY SSF52540 11 94 1.03E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17080 c69ae3cea6e2b0ca5f5f5b83231b3989 842 Gene3D G3DSA:3.40.50.300 46 77 0.057 T 28-03-2018 APY29_RS17080 c69ae3cea6e2b0ca5f5f5b83231b3989 842 SUPERFAMILY SSF52540 583 812 2.46E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17080 c69ae3cea6e2b0ca5f5f5b83231b3989 842 SUPERFAMILY SSF52540 506 547 2.46E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17080 c69ae3cea6e2b0ca5f5f5b83231b3989 842 Gene3D G3DSA:3.40.50.300 498 839 2.7E-50 T 28-03-2018 APY29_RS17080 c69ae3cea6e2b0ca5f5f5b83231b3989 842 Pfam PF00005 ABC transporter 511 759 9.4E-7 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS17080 c69ae3cea6e2b0ca5f5f5b83231b3989 842 Gene3D G3DSA:3.40.50.300 12 45 0.063 T 28-03-2018 APY29_RS17080 c69ae3cea6e2b0ca5f5f5b83231b3989 842 ProSitePatterns PS00211 ABC transporters family signature. 729 743 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS17080 c69ae3cea6e2b0ca5f5f5b83231b3989 842 Gene3D G3DSA:1.20.1580.10 98 376 3.4E-57 T 28-03-2018 APY29_RS17080 c69ae3cea6e2b0ca5f5f5b83231b3989 842 ProSitePatterns PS00211 ABC transporters family signature. 376 390 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS06395 f9371cd3950f20f8cb04c8d75916f401 224 SUPERFAMILY SSF52402 1 221 5.29E-63 T 28-03-2018 APY29_RS06395 f9371cd3950f20f8cb04c8d75916f401 224 PIRSF PIRSF006293 1 223 8.5E-77 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 APY29_RS06395 f9371cd3950f20f8cb04c8d75916f401 224 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 9.9E-76 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 APY29_RS06395 f9371cd3950f20f8cb04c8d75916f401 224 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 55.761 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 APY29_RS06395 f9371cd3950f20f8cb04c8d75916f401 224 Gene3D G3DSA:3.40.50.620 1 224 2.0E-50 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS06395 f9371cd3950f20f8cb04c8d75916f401 224 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 4.7E-57 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 APY29_RS17335 54dade89e1e5e47dfd74d766f7028269 863 Gene3D G3DSA:3.30.499.10 2 227 3.6E-58 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS17335 54dade89e1e5e47dfd74d766f7028269 863 Pfam PF00330 Aconitase family (aconitate hydratase) 70 533 5.3E-145 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS17335 54dade89e1e5e47dfd74d766f7028269 863 Pfam PF00694 Aconitase C-terminal domain 657 787 2.1E-29 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS17335 54dade89e1e5e47dfd74d766f7028269 863 Gene3D G3DSA:3.30.499.10 359 547 1.0E-53 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS17335 54dade89e1e5e47dfd74d766f7028269 863 PRINTS PR00415 Aconitase family signature 360 374 4.3E-28 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS17335 54dade89e1e5e47dfd74d766f7028269 863 PRINTS PR00415 Aconitase family signature 402 413 4.3E-28 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS17335 54dade89e1e5e47dfd74d766f7028269 863 PRINTS PR00415 Aconitase family signature 191 204 4.3E-28 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS17335 54dade89e1e5e47dfd74d766f7028269 863 PRINTS PR00415 Aconitase family signature 464 477 4.3E-28 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS17335 54dade89e1e5e47dfd74d766f7028269 863 PRINTS PR00415 Aconitase family signature 205 220 4.3E-28 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS17335 54dade89e1e5e47dfd74d766f7028269 863 PRINTS PR00415 Aconitase family signature 138 151 4.3E-28 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS17335 54dade89e1e5e47dfd74d766f7028269 863 PRINTS PR00415 Aconitase family signature 267 280 4.3E-28 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS17335 54dade89e1e5e47dfd74d766f7028269 863 PRINTS PR00415 Aconitase family signature 162 170 4.3E-28 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS17335 54dade89e1e5e47dfd74d766f7028269 863 PRINTS PR00415 Aconitase family signature 281 294 4.3E-28 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS17335 54dade89e1e5e47dfd74d766f7028269 863 SUPERFAMILY SSF53732 22 589 1.7E-181 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS17335 54dade89e1e5e47dfd74d766f7028269 863 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 859 0.0 T 28-03-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 APY29_RS17335 54dade89e1e5e47dfd74d766f7028269 863 Gene3D G3DSA:3.40.1060.10 228 358 1.9E-39 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS17335 54dade89e1e5e47dfd74d766f7028269 863 Gene3D G3DSA:3.20.19.10 619 859 6.3E-68 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APY29_RS17335 54dade89e1e5e47dfd74d766f7028269 863 SUPERFAMILY SSF52016 599 857 2.55E-67 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APY29_RS11865 5ed341c1d48df19342f169a77709295b 199 Gene3D G3DSA:3.30.300.130 109 189 1.2E-24 T 28-03-2018 IPR034904 Fe-S cluster assembly domain APY29_RS11865 5ed341c1d48df19342f169a77709295b 199 Gene3D G3DSA:2.60.300.12 1 108 5.1E-11 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 APY29_RS11865 5ed341c1d48df19342f169a77709295b 199 Pfam PF01106 NifU-like domain 115 179 9.6E-20 T 28-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 APY29_RS11865 5ed341c1d48df19342f169a77709295b 199 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 120 179 3.0E-28 T 28-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 APY29_RS11865 5ed341c1d48df19342f169a77709295b 199 SUPERFAMILY SSF89360 1 99 6.08E-15 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 APY29_RS11865 5ed341c1d48df19342f169a77709295b 199 SUPERFAMILY SSF117916 103 186 2.4E-22 T 28-03-2018 IPR034904 Fe-S cluster assembly domain APY29_RS11865 5ed341c1d48df19342f169a77709295b 199 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 193 39.502 T 28-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 SMART SM00448 761 873 4.7E-16 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 695 713 3.5E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 719 732 3.5E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 679 689 3.5E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 661 675 3.5E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 626 734 3.8E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 SUPERFAMILY SSF47384 502 582 1.08E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 SUPERFAMILY SSF55874 570 733 2.36E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 Gene3D G3DSA:3.30.565.10 576 735 5.5E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 SMART SM00387 625 735 3.5E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 SUPERFAMILY SSF55785 355 466 1.11E-7 T 28-03-2018 IPR000014 PAS domain APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 Pfam PF00072 Response regulator receiver domain 763 873 4.6E-16 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 Pfam PF02743 Cache domain 45 191 1.7E-13 T 28-03-2018 IPR033479 Double Cache domain 1 APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 SUPERFAMILY SSF52172 759 877 6.26E-22 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 Gene3D G3DSA:3.30.450.20 167 289 0.017 T 28-03-2018 APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 SUPERFAMILY SSF103190 54 191 2.62E-13 T 28-03-2018 IPR029151 Periplasmic sensor domain-like APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 Pfam PF00512 His Kinase A (phospho-acceptor) domain 517 581 2.9E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 Gene3D G3DSA:3.40.50.2300 747 881 5.2E-21 T 28-03-2018 APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 Pfam PF12860 PAS fold 369 482 2.9E-40 T 28-03-2018 APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 Gene3D G3DSA:1.10.287.130 508 575 1.2E-9 T 28-03-2018 APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 Gene3D G3DSA:3.30.450.20 358 507 9.0E-20 T 28-03-2018 APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 SMART SM00388 516 581 2.3E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS04880 57b512d090a26f8177a000cf59177e3a 881 Gene3D G3DSA:3.30.450.20 59 166 6.3E-24 T 28-03-2018 APY29_RS14055 d4caa0d927bac6fb6660abbefb753dc0 225 Gene3D G3DSA:3.40.50.150 15 222 3.9E-40 T 28-03-2018 APY29_RS14055 d4caa0d927bac6fb6660abbefb753dc0 225 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 23 221 1.0E-55 T 28-03-2018 APY29_RS14055 d4caa0d927bac6fb6660abbefb753dc0 225 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 145 160 - T 28-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 APY29_RS14055 d4caa0d927bac6fb6660abbefb753dc0 225 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 18 222 1.3E-60 T 28-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 APY29_RS14055 d4caa0d927bac6fb6660abbefb753dc0 225 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 17 225 35.025 T 28-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 APY29_RS14055 d4caa0d927bac6fb6660abbefb753dc0 225 SUPERFAMILY SSF53335 19 222 4.1E-43 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS22905 fad032d2007c7a006470a4849f1e0f2a 533 SUPERFAMILY SSF74650 43 412 1.57E-155 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APY29_RS22905 fad032d2007c7a006470a4849f1e0f2a 533 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 43 522 3.5E-195 T 28-03-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 APY29_RS22905 fad032d2007c7a006470a4849f1e0f2a 533 Gene3D G3DSA:2.60.40.10 414 526 6.8E-30 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS22905 fad032d2007c7a006470a4849f1e0f2a 533 PIRSF PIRSF006281 1 526 2.0E-209 T 28-03-2018 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D APY29_RS22905 fad032d2007c7a006470a4849f1e0f2a 533 Gene3D G3DSA:2.70.98.10 43 410 3.0E-161 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 APY29_RS22905 fad032d2007c7a006470a4849f1e0f2a 533 SUPERFAMILY SSF81296 413 525 1.82E-28 T 28-03-2018 IPR014756 Immunoglobulin E-set APY29_RS22905 fad032d2007c7a006470a4849f1e0f2a 533 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 532 62.967 T 28-03-2018 IPR023724 Glucan biosynthesis, MdoD APY29_RS16425 ea09b2f8bd1e8ed9698401728a97fe38 376 Gene3D G3DSA:3.40.50.2300 15 159 2.1E-34 T 28-03-2018 APY29_RS16425 ea09b2f8bd1e8ed9698401728a97fe38 376 Pfam PF00512 His Kinase A (phospho-acceptor) domain 161 222 3.4E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS16425 ea09b2f8bd1e8ed9698401728a97fe38 376 Gene3D G3DSA:1.10.287.130 160 220 5.7E-14 T 28-03-2018 APY29_RS16425 ea09b2f8bd1e8ed9698401728a97fe38 376 SUPERFAMILY SSF55874 213 361 2.23E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16425 ea09b2f8bd1e8ed9698401728a97fe38 376 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 267 361 6.2E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16425 ea09b2f8bd1e8ed9698401728a97fe38 376 SUPERFAMILY SSF52172 17 157 1.85E-35 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS16425 ea09b2f8bd1e8ed9698401728a97fe38 376 SMART SM00388 158 224 2.0E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS16425 ea09b2f8bd1e8ed9698401728a97fe38 376 SUPERFAMILY SSF47384 145 224 1.51E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS16425 ea09b2f8bd1e8ed9698401728a97fe38 376 SMART SM00387 267 373 1.1E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16425 ea09b2f8bd1e8ed9698401728a97fe38 376 Gene3D G3DSA:3.30.565.10 233 373 1.4E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16425 ea09b2f8bd1e8ed9698401728a97fe38 376 SMART SM00448 18 132 7.3E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS16425 ea09b2f8bd1e8ed9698401728a97fe38 376 Pfam PF00072 Response regulator receiver domain 20 132 1.3E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS20970 221c196026a249080c4d5c6da4118aaa 869 Gene3D G3DSA:3.20.20.80 6 765 7.4E-105 T 28-03-2018 APY29_RS20970 221c196026a249080c4d5c6da4118aaa 869 Gene3D G3DSA:2.60.40.1180 766 858 1.5E-4 T 28-03-2018 APY29_RS20970 221c196026a249080c4d5c6da4118aaa 869 SMART SM00642 7 750 1.7E-6 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS20970 221c196026a249080c4d5c6da4118aaa 869 Pfam PF00128 Alpha amylase, catalytic domain 26 98 5.9E-14 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS20970 221c196026a249080c4d5c6da4118aaa 869 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 5 865 0.0 T 28-03-2018 IPR012767 Maltooligosyl trehalose synthase KEGG: 00500+5.4.99.15|MetaCyc: PWY-2661 APY29_RS20970 221c196026a249080c4d5c6da4118aaa 869 SUPERFAMILY SSF51445 5 138 1.44E-126 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS20970 221c196026a249080c4d5c6da4118aaa 869 SUPERFAMILY SSF51445 474 766 1.44E-126 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS20970 221c196026a249080c4d5c6da4118aaa 869 SUPERFAMILY SSF51445 197 440 1.44E-126 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS23685 b4ffd5696c86d3d76d3d3c28c883c989 208 Gene3D G3DSA:3.30.420.10 42 207 2.1E-38 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS23685 b4ffd5696c86d3d76d3d3c28c883c989 208 Pfam PF00665 Integrase core domain 50 162 4.9E-26 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 APY29_RS23685 b4ffd5696c86d3d76d3d3c28c883c989 208 SUPERFAMILY SSF53098 43 202 5.31E-43 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS07850 fe74757c34aa4241bc0b04cb705f9a71 230 SMART SM00862 151 228 2.9E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS07850 fe74757c34aa4241bc0b04cb705f9a71 230 SUPERFAMILY SSF52172 4 125 2.85E-39 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS07850 fe74757c34aa4241bc0b04cb705f9a71 230 Gene3D G3DSA:3.40.50.2300 1 125 5.5E-33 T 28-03-2018 APY29_RS07850 fe74757c34aa4241bc0b04cb705f9a71 230 Pfam PF00072 Response regulator receiver domain 8 117 1.6E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS07850 fe74757c34aa4241bc0b04cb705f9a71 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 228 1.7E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS07850 fe74757c34aa4241bc0b04cb705f9a71 230 SMART SM00448 6 116 6.2E-40 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS07850 fe74757c34aa4241bc0b04cb705f9a71 230 Gene3D G3DSA:1.10.10.10 126 230 1.6E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS07850 fe74757c34aa4241bc0b04cb705f9a71 230 SUPERFAMILY SSF46894 136 229 1.13E-22 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS13340 8a5437ef1694fe11af94f26debc7b542 391 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 391 48.308 T 28-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APY29_RS13340 8a5437ef1694fe11af94f26debc7b542 391 SUPERFAMILY SSF52021 4 149 7.59E-57 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APY29_RS13340 8a5437ef1694fe11af94f26debc7b542 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 246 260 2.9E-38 T 28-03-2018 APY29_RS13340 8a5437ef1694fe11af94f26debc7b542 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 207 221 2.9E-38 T 28-03-2018 APY29_RS13340 8a5437ef1694fe11af94f26debc7b542 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 294 311 2.9E-38 T 28-03-2018 APY29_RS13340 8a5437ef1694fe11af94f26debc7b542 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 319 330 2.9E-38 T 28-03-2018 APY29_RS13340 8a5437ef1694fe11af94f26debc7b542 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 277 293 2.9E-38 T 28-03-2018 APY29_RS13340 8a5437ef1694fe11af94f26debc7b542 391 SMART SM01097 3 133 9.5E-89 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APY29_RS13340 8a5437ef1694fe11af94f26debc7b542 391 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 388 1.3E-143 T 28-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APY29_RS13340 8a5437ef1694fe11af94f26debc7b542 391 Gene3D G3DSA:3.40.50.880 151 391 1.9E-65 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS13340 8a5437ef1694fe11af94f26debc7b542 391 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 131 7.0E-53 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APY29_RS13340 8a5437ef1694fe11af94f26debc7b542 391 Pfam PF00117 Glutamine amidotransferase class-I 210 385 9.8E-46 T 28-03-2018 IPR017926 Glutamine amidotransferase APY29_RS13340 8a5437ef1694fe11af94f26debc7b542 391 Gene3D G3DSA:3.50.30.20 2 150 5.1E-62 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APY29_RS13340 8a5437ef1694fe11af94f26debc7b542 391 SUPERFAMILY SSF52317 204 389 3.25E-61 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS13340 8a5437ef1694fe11af94f26debc7b542 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 249 258 3.4E-10 T 28-03-2018 APY29_RS13340 8a5437ef1694fe11af94f26debc7b542 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 362 375 3.4E-10 T 28-03-2018 APY29_RS13340 8a5437ef1694fe11af94f26debc7b542 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 277 288 3.4E-10 T 28-03-2018 APY29_RS01010 67883c4af898fd4a30620207a423a8cc 123 SUPERFAMILY SSF53041 5 107 1.44E-21 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APY29_RS01010 67883c4af898fd4a30620207a423a8cc 123 Gene3D G3DSA:3.40.50.1390 4 122 3.7E-27 T 28-03-2018 APY29_RS01010 67883c4af898fd4a30620207a423a8cc 123 SMART SM00857 5 120 1.9E-17 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APY29_RS01010 67883c4af898fd4a30620207a423a8cc 123 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 APY29_RS01010 67883c4af898fd4a30620207a423a8cc 123 Pfam PF00239 Resolvase, N terminal domain 6 103 9.9E-20 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APY29_RS10345 df8a83c8e84fcc3a17754b14476d9e82 411 Pfam PF00764 Arginosuccinate synthase 21 406 7.6E-83 T 28-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 APY29_RS10345 df8a83c8e84fcc3a17754b14476d9e82 411 Hamap MF_00005 Argininosuccinate synthase [argG]. 17 411 39.669 T 28-03-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 APY29_RS10345 df8a83c8e84fcc3a17754b14476d9e82 411 Gene3D G3DSA:3.40.50.620 12 194 1.9E-23 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS10345 df8a83c8e84fcc3a17754b14476d9e82 411 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 23 31 - T 28-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 APY29_RS10345 df8a83c8e84fcc3a17754b14476d9e82 411 Gene3D G3DSA:3.90.1260.10 195 411 3.3E-55 T 28-03-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 APY29_RS10345 df8a83c8e84fcc3a17754b14476d9e82 411 SUPERFAMILY SSF69864 189 410 1.96E-55 T 28-03-2018 APY29_RS10345 df8a83c8e84fcc3a17754b14476d9e82 411 SUPERFAMILY SSF52402 18 199 1.94E-34 T 28-03-2018 APY29_RS10345 df8a83c8e84fcc3a17754b14476d9e82 411 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 131 142 - T 28-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 APY29_RS10345 df8a83c8e84fcc3a17754b14476d9e82 411 TIGRFAM TIGR00032 argG: argininosuccinate synthase 20 409 9.3E-81 T 28-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 APY29_RS15520 187b5875c8f58e1f77d0b5a7049f0f20 729 PRINTS PR00133 Glycosyl hydrolase family 3 signature 109 128 2.6E-26 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS15520 187b5875c8f58e1f77d0b5a7049f0f20 729 PRINTS PR00133 Glycosyl hydrolase family 3 signature 186 202 2.6E-26 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS15520 187b5875c8f58e1f77d0b5a7049f0f20 729 PRINTS PR00133 Glycosyl hydrolase family 3 signature 79 95 2.6E-26 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS15520 187b5875c8f58e1f77d0b5a7049f0f20 729 PRINTS PR00133 Glycosyl hydrolase family 3 signature 256 274 2.6E-26 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS15520 187b5875c8f58e1f77d0b5a7049f0f20 729 PRINTS PR00133 Glycosyl hydrolase family 3 signature 155 171 2.6E-26 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS15520 187b5875c8f58e1f77d0b5a7049f0f20 729 SMART SM01217 644 712 2.5E-15 T 28-03-2018 IPR026891 Fibronectin type III-like domain APY29_RS15520 187b5875c8f58e1f77d0b5a7049f0f20 729 Pfam PF14310 Fibronectin type III-like domain 645 711 2.9E-12 T 28-03-2018 IPR026891 Fibronectin type III-like domain APY29_RS15520 187b5875c8f58e1f77d0b5a7049f0f20 729 SUPERFAMILY SSF51445 21 354 2.63E-83 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS15520 187b5875c8f58e1f77d0b5a7049f0f20 729 SUPERFAMILY SSF52279 362 561 1.12E-51 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APY29_RS15520 187b5875c8f58e1f77d0b5a7049f0f20 729 SUPERFAMILY SSF52279 592 614 1.12E-51 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APY29_RS15520 187b5875c8f58e1f77d0b5a7049f0f20 729 Gene3D G3DSA:3.40.50.1700 347 611 6.7E-73 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APY29_RS15520 187b5875c8f58e1f77d0b5a7049f0f20 729 Gene3D G3DSA:2.60.40.10 612 726 2.2E-24 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS15520 187b5875c8f58e1f77d0b5a7049f0f20 729 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 80 327 4.7E-37 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS15520 187b5875c8f58e1f77d0b5a7049f0f20 729 Gene3D G3DSA:3.20.20.300 11 335 1.1E-88 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS15520 187b5875c8f58e1f77d0b5a7049f0f20 729 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 362 611 9.3E-59 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APY29_RS06830 367f3339cad767245d354cf1a6efd928 117 Pfam PF06993 Protein of unknown function (DUF1304) 11 114 1.2E-38 T 28-03-2018 IPR009732 Protein of unknown function DUF1304 APY29_RS21460 0bab68debd59292c9eb41bb23acd7ea4 143 Pfam PF01638 HxlR-like helix-turn-helix 31 116 1.1E-26 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type APY29_RS21460 0bab68debd59292c9eb41bb23acd7ea4 143 SUPERFAMILY SSF46785 18 128 9.1E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS21460 0bab68debd59292c9eb41bb23acd7ea4 143 Gene3D G3DSA:1.10.10.10 14 143 2.7E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS22855 bbdec8a0de0271a389a93dc07e9690b3 506 PIRSF PIRSF011396 1 504 3.2E-197 T 28-03-2018 IPR033856 Flavin-dependent tryptophan halogenase APY29_RS22855 bbdec8a0de0271a389a93dc07e9690b3 506 SUPERFAMILY SSF51905 326 421 7.18E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS22855 bbdec8a0de0271a389a93dc07e9690b3 506 SUPERFAMILY SSF51905 8 90 7.18E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS22855 bbdec8a0de0271a389a93dc07e9690b3 506 SUPERFAMILY SSF51905 147 241 7.18E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS22855 bbdec8a0de0271a389a93dc07e9690b3 506 Gene3D G3DSA:3.50.50.60 7 366 1.5E-32 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS22855 bbdec8a0de0271a389a93dc07e9690b3 506 Pfam PF04820 Tryptophan halogenase 8 468 2.6E-199 T 28-03-2018 IPR006905 Flavin-dependent halogenase APY29_RS00615 5d3d2499e9aa4edb697f2aeff8456bb9 319 TIGRFAM TIGR02772 Ku_bact: Ku protein 2 265 4.0E-99 T 28-03-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type APY29_RS00615 5d3d2499e9aa4edb697f2aeff8456bb9 319 Pfam PF02735 Ku70/Ku80 beta-barrel domain 12 178 7.8E-29 T 28-03-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 APY29_RS00615 5d3d2499e9aa4edb697f2aeff8456bb9 319 SUPERFAMILY SSF100939 2 265 8.04E-44 T 28-03-2018 IPR016194 SPOC-like, C-terminal domain APY29_RS00615 5d3d2499e9aa4edb697f2aeff8456bb9 319 Gene3D G3DSA:2.40.290.10 2 180 7.7E-26 T 28-03-2018 IPR016194 SPOC-like, C-terminal domain APY29_RS00615 5d3d2499e9aa4edb697f2aeff8456bb9 319 PIRSF PIRSF006493 1 313 4.5E-84 T 28-03-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type APY29_RS00615 5d3d2499e9aa4edb697f2aeff8456bb9 319 SMART SM00559 53 182 1.9E-20 T 28-03-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 APY29_RS00615 5d3d2499e9aa4edb697f2aeff8456bb9 319 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 2 263 30.225 T 28-03-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type APY29_RS16495 2b39da86d5eb8dacd96d5f5131e93995 476 SMART SM00342 389 474 1.0E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS16495 2b39da86d5eb8dacd96d5f5131e93995 476 Gene3D G3DSA:1.10.10.60 428 476 1.2E-4 T 28-03-2018 APY29_RS16495 2b39da86d5eb8dacd96d5f5131e93995 476 Pfam PF12833 Helix-turn-helix domain 395 476 1.4E-16 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS16495 2b39da86d5eb8dacd96d5f5131e93995 476 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 426 470 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APY29_RS16495 2b39da86d5eb8dacd96d5f5131e93995 476 SUPERFAMILY SSF46689 376 423 7.39E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS16495 2b39da86d5eb8dacd96d5f5131e93995 476 Gene3D G3DSA:1.10.10.60 377 427 3.2E-11 T 28-03-2018 APY29_RS16495 2b39da86d5eb8dacd96d5f5131e93995 476 Gene3D G3DSA:1.25.40.10 8 163 4.0E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS16495 2b39da86d5eb8dacd96d5f5131e93995 476 Gene3D G3DSA:1.25.20.10 164 376 0.048 T 28-03-2018 APY29_RS16495 2b39da86d5eb8dacd96d5f5131e93995 476 SUPERFAMILY SSF48452 27 167 2.68E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS11710 294be496972779c1757e0b8a43fd5d8a 1046 SUPERFAMILY SSF52540 501 634 3.45E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11710 294be496972779c1757e0b8a43fd5d8a 1046 SUPERFAMILY SSF52540 170 342 3.45E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11710 294be496972779c1757e0b8a43fd5d8a 1046 SMART SM00490 535 624 1.4E-18 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS11710 294be496972779c1757e0b8a43fd5d8a 1046 Pfam PF00271 Helicase conserved C-terminal domain 520 624 4.3E-16 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS11710 294be496972779c1757e0b8a43fd5d8a 1046 Gene3D G3DSA:3.40.50.300 118 494 1.0E-23 T 28-03-2018 APY29_RS11710 294be496972779c1757e0b8a43fd5d8a 1046 Pfam PF00176 SNF2 family N-terminal domain 143 343 6.2E-11 T 28-03-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 APY29_RS11710 294be496972779c1757e0b8a43fd5d8a 1046 SMART SM00487 119 334 3.6E-13 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APY29_RS11710 294be496972779c1757e0b8a43fd5d8a 1046 Gene3D G3DSA:3.40.50.300 495 1004 3.5E-27 T 28-03-2018 APY29_RS14770 de8bd95a719eb300d2995af558229142 481 SUPERFAMILY SSF53098 2 477 6.17E-115 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS14770 de8bd95a719eb300d2995af558229142 481 Pfam PF00929 Exonuclease 7 185 6.4E-22 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III APY29_RS14770 de8bd95a719eb300d2995af558229142 481 Pfam PF08411 Exonuclease C-terminal 206 475 1.8E-91 T 28-03-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 APY29_RS14770 de8bd95a719eb300d2995af558229142 481 SMART SM00479 4 197 3.7E-5 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III APY29_RS14770 de8bd95a719eb300d2995af558229142 481 PIRSF PIRSF000977 1 481 4.7E-174 T 28-03-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 APY29_RS14770 de8bd95a719eb300d2995af558229142 481 Gene3D G3DSA:3.30.420.10 1 195 3.2E-29 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS03745 bbd30742c329750ba1b95533c525133d 578 SMART SM00448 457 569 1.1E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS03745 bbd30742c329750ba1b95533c525133d 578 Gene3D G3DSA:1.10.287.130 192 265 1.3E-14 T 28-03-2018 APY29_RS03745 bbd30742c329750ba1b95533c525133d 578 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 429 4.9E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS03745 bbd30742c329750ba1b95533c525133d 578 Gene3D G3DSA:3.30.565.10 274 441 5.2E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS03745 bbd30742c329750ba1b95533c525133d 578 Pfam PF00072 Response regulator receiver domain 460 569 1.5E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS03745 bbd30742c329750ba1b95533c525133d 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 6.2E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS03745 bbd30742c329750ba1b95533c525133d 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 6.2E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS03745 bbd30742c329750ba1b95533c525133d 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 411 6.2E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS03745 bbd30742c329750ba1b95533c525133d 578 SUPERFAMILY SSF52172 456 575 3.27E-31 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS03745 bbd30742c329750ba1b95533c525133d 578 SUPERFAMILY SSF55874 259 429 2.88E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS03745 bbd30742c329750ba1b95533c525133d 578 SUPERFAMILY SSF47384 190 271 1.08E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS03745 bbd30742c329750ba1b95533c525133d 578 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 270 1.2E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS03745 bbd30742c329750ba1b95533c525133d 578 Gene3D G3DSA:3.40.50.2300 443 578 1.6E-30 T 28-03-2018 APY29_RS03745 bbd30742c329750ba1b95533c525133d 578 SMART SM00388 205 270 4.3E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS03745 bbd30742c329750ba1b95533c525133d 578 SMART SM00387 317 433 8.0E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS07835 700b6d10c367459cdff024cc2ef0191f 1154 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 27 1113 28.816 T 28-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 APY29_RS07835 700b6d10c367459cdff024cc2ef0191f 1154 Pfam PF00270 DEAD/DEAH box helicase 613 769 1.3E-16 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APY29_RS07835 700b6d10c367459cdff024cc2ef0191f 1154 SUPERFAMILY SSF52540 25 346 3.32E-94 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS07835 700b6d10c367459cdff024cc2ef0191f 1154 Gene3D G3DSA:3.40.50.300 794 961 1.6E-23 T 28-03-2018 APY29_RS07835 700b6d10c367459cdff024cc2ef0191f 1154 SUPERFAMILY SSF52540 360 470 1.49E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS07835 700b6d10c367459cdff024cc2ef0191f 1154 SUPERFAMILY SSF141259 476 553 2.88E-21 T 28-03-2018 IPR003711 CarD-like/TRCF domain APY29_RS07835 700b6d10c367459cdff024cc2ef0191f 1154 Pfam PF02559 CarD-like/TRCF domain 485 578 8.9E-24 T 28-03-2018 IPR003711 CarD-like/TRCF domain APY29_RS07835 700b6d10c367459cdff024cc2ef0191f 1154 SUPERFAMILY SSF52540 528 789 1.8E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS07835 700b6d10c367459cdff024cc2ef0191f 1154 Gene3D G3DSA:3.30.2060.10 136 182 0.0011 T 28-03-2018 APY29_RS07835 700b6d10c367459cdff024cc2ef0191f 1154 Pfam PF00271 Helicase conserved C-terminal domain 815 914 1.9E-15 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS07835 700b6d10c367459cdff024cc2ef0191f 1154 SUPERFAMILY SSF52540 787 994 1.27E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS07835 700b6d10c367459cdff024cc2ef0191f 1154 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 153 1087 0.0 T 28-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 APY29_RS07835 700b6d10c367459cdff024cc2ef0191f 1154 SMART SM01058 484 581 2.0E-47 T 28-03-2018 IPR003711 CarD-like/TRCF domain APY29_RS07835 700b6d10c367459cdff024cc2ef0191f 1154 Pfam PF03461 TRCF domain 1015 1107 9.0E-27 T 28-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 APY29_RS07835 700b6d10c367459cdff024cc2ef0191f 1154 SUPERFAMILY SSF143517 1006 1152 7.19E-42 T 28-03-2018 APY29_RS07835 700b6d10c367459cdff024cc2ef0191f 1154 SMART SM00487 605 795 9.8E-35 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APY29_RS07835 700b6d10c367459cdff024cc2ef0191f 1154 SMART SM00982 1014 1114 1.0E-49 T 28-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 APY29_RS07835 700b6d10c367459cdff024cc2ef0191f 1154 SMART SM00490 831 915 6.4E-18 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS07835 700b6d10c367459cdff024cc2ef0191f 1154 Gene3D G3DSA:3.40.50.300 303 792 3.0E-37 T 28-03-2018 APY29_RS15740 6bc3c0cd617b777652e7d6a60b206152 251 Gene3D G3DSA:1.25.40.10 205 240 0.067 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS15740 6bc3c0cd617b777652e7d6a60b206152 251 PIRSF PIRSF030959 2 248 4.3E-114 T 28-03-2018 IPR014562 Uncharacterised conserved protein UCP030959, divergent TPR repeat-containing APY29_RS15740 6bc3c0cd617b777652e7d6a60b206152 251 Gene3D G3DSA:1.25.40.10 67 204 1.3E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS15740 6bc3c0cd617b777652e7d6a60b206152 251 Pfam PF14559 Tetratricopeptide repeat 98 165 6.5E-10 T 28-03-2018 APY29_RS15740 6bc3c0cd617b777652e7d6a60b206152 251 SUPERFAMILY SSF48452 87 229 3.8E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS07805 d0e9ca6e5a175e19f480cb01e4c2cfc8 109 Gene3D G3DSA:3.30.750.24 2 107 6.7E-10 T 28-03-2018 IPR002645 STAS domain APY29_RS07805 d0e9ca6e5a175e19f480cb01e4c2cfc8 109 SUPERFAMILY SSF52091 1 97 5.89E-15 T 28-03-2018 IPR002645 STAS domain APY29_RS07805 d0e9ca6e5a175e19f480cb01e4c2cfc8 109 Pfam PF13466 STAS domain 14 92 2.6E-15 T 28-03-2018 IPR002645 STAS domain APY29_RS23275 cfeef6a54a4f2f2813b0a405baeb27ea 582 SUPERFAMILY SSF55785 298 422 7.57E-20 T 28-03-2018 IPR000014 PAS domain APY29_RS23275 cfeef6a54a4f2f2813b0a405baeb27ea 582 SMART SM00091 313 379 5.1E-8 T 28-03-2018 IPR000014 PAS domain APY29_RS23275 cfeef6a54a4f2f2813b0a405baeb27ea 582 Gene3D G3DSA:3.30.450.20 312 429 6.4E-19 T 28-03-2018 APY29_RS23275 cfeef6a54a4f2f2813b0a405baeb27ea 582 Pfam PF00990 Diguanylate cyclase, GGDEF domain 436 574 1.1E-24 T 28-03-2018 IPR000160 GGDEF domain APY29_RS23275 cfeef6a54a4f2f2813b0a405baeb27ea 582 SUPERFAMILY SSF55781 32 171 7.63E-23 T 28-03-2018 IPR029016 GAF domain-like APY29_RS23275 cfeef6a54a4f2f2813b0a405baeb27ea 582 SMART SM00267 424 580 3.1E-15 T 28-03-2018 IPR000160 GGDEF domain APY29_RS23275 cfeef6a54a4f2f2813b0a405baeb27ea 582 Pfam PF08448 PAS fold 326 425 1.7E-7 T 28-03-2018 IPR013656 PAS fold-4 APY29_RS23275 cfeef6a54a4f2f2813b0a405baeb27ea 582 Gene3D G3DSA:3.30.70.270 430 580 3.5E-31 T 28-03-2018 APY29_RS23275 cfeef6a54a4f2f2813b0a405baeb27ea 582 SMART SM00065 30 173 1.0E-7 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS23275 cfeef6a54a4f2f2813b0a405baeb27ea 582 SUPERFAMILY SSF55785 178 299 7.15E-13 T 28-03-2018 IPR000014 PAS domain APY29_RS23275 cfeef6a54a4f2f2813b0a405baeb27ea 582 SUPERFAMILY SSF55073 440 575 5.65E-27 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS23275 cfeef6a54a4f2f2813b0a405baeb27ea 582 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 310 431 6.5E-15 T 28-03-2018 IPR000014 PAS domain APY29_RS23275 cfeef6a54a4f2f2813b0a405baeb27ea 582 Pfam PF01590 GAF domain 57 160 5.2E-8 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS23275 cfeef6a54a4f2f2813b0a405baeb27ea 582 Gene3D G3DSA:3.30.450.40 13 192 2.4E-25 T 28-03-2018 IPR029016 GAF domain-like APY29_RS23275 cfeef6a54a4f2f2813b0a405baeb27ea 582 Gene3D G3DSA:3.30.450.20 198 243 8.2E-8 T 28-03-2018 APY29_RS23275 cfeef6a54a4f2f2813b0a405baeb27ea 582 Gene3D G3DSA:3.30.450.20 244 311 7.5E-7 T 28-03-2018 APY29_RS23275 cfeef6a54a4f2f2813b0a405baeb27ea 582 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 434 575 2.2E-25 T 28-03-2018 IPR000160 GGDEF domain APY29_RS00610 7e43398d3709f8e9a61180ae8c29bef1 388 SUPERFAMILY SSF51395 223 372 2.38E-98 T 28-03-2018 APY29_RS00610 7e43398d3709f8e9a61180ae8c29bef1 388 SUPERFAMILY SSF51395 6 193 2.38E-98 T 28-03-2018 APY29_RS00610 7e43398d3709f8e9a61180ae8c29bef1 388 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 28-03-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 APY29_RS00610 7e43398d3709f8e9a61180ae8c29bef1 388 Gene3D G3DSA:3.20.20.70 2 380 5.3E-98 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS00610 7e43398d3709f8e9a61180ae8c29bef1 388 Pfam PF01070 FMN-dependent dehydrogenase 13 376 2.5E-127 T 28-03-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 APY29_RS00610 7e43398d3709f8e9a61180ae8c29bef1 388 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 74.759 T 28-03-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 APY29_RS00610 7e43398d3709f8e9a61180ae8c29bef1 388 PIRSF PIRSF000138 2 380 2.7E-123 T 28-03-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 APY29_RS19890 11c8162763ed0973f95006dc58761e2a 350 SUPERFAMILY SSF55874 217 297 1.34E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS19890 11c8162763ed0973f95006dc58761e2a 350 Pfam PF06580 Histidine kinase 159 237 1.4E-20 T 28-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 APY29_RS19890 11c8162763ed0973f95006dc58761e2a 350 Gene3D G3DSA:3.30.565.10 212 330 2.6E-6 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS05405 bae0ae5efedb33858ce2f3964275429d 666 ProSitePatterns PS00802 Transketolase signature 2. 470 486 - T 28-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 APY29_RS05405 bae0ae5efedb33858ce2f3964275429d 666 Pfam PF02779 Transketolase, pyrimidine binding domain 356 528 6.2E-43 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain APY29_RS05405 bae0ae5efedb33858ce2f3964275429d 666 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 APY29_RS05405 bae0ae5efedb33858ce2f3964275429d 666 SUPERFAMILY SSF52518 336 529 7.85E-63 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold APY29_RS05405 bae0ae5efedb33858ce2f3964275429d 666 Gene3D G3DSA:3.40.50.970 365 543 5.3E-40 T 28-03-2018 APY29_RS05405 bae0ae5efedb33858ce2f3964275429d 666 SMART SM00861 357 529 3.1E-63 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain APY29_RS05405 bae0ae5efedb33858ce2f3964275429d 666 Gene3D G3DSA:3.40.50.970 1 364 1.1E-119 T 28-03-2018 APY29_RS05405 bae0ae5efedb33858ce2f3964275429d 666 Gene3D G3DSA:3.40.50.920 544 666 1.2E-34 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APY29_RS05405 bae0ae5efedb33858ce2f3964275429d 666 SUPERFAMILY SSF52922 536 666 3.8E-43 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APY29_RS05405 bae0ae5efedb33858ce2f3964275429d 666 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 336 3.7E-153 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 APY29_RS05405 bae0ae5efedb33858ce2f3964275429d 666 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 666 2.2E-284 T 28-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 APY29_RS05405 bae0ae5efedb33858ce2f3964275429d 666 Pfam PF02780 Transketolase, C-terminal domain 553 659 3.6E-18 T 28-03-2018 IPR033248 Transketolase, C-terminal domain APY29_RS05405 bae0ae5efedb33858ce2f3964275429d 666 SUPERFAMILY SSF52518 6 321 3.14E-120 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold APY29_RS01825 788955b5940d7c2af77a90f9884f5a71 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 183 202 2.2E-5 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APY29_RS01825 788955b5940d7c2af77a90f9884f5a71 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 65 87 2.2E-5 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APY29_RS01825 788955b5940d7c2af77a90f9884f5a71 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 109 134 2.2E-5 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APY29_RS01825 788955b5940d7c2af77a90f9884f5a71 263 Pfam PF01061 ABC-2 type transporter 16 225 2.2E-35 T 28-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 APY29_RS01825 788955b5940d7c2af77a90f9884f5a71 263 PIRSF PIRSF006648 1 260 3.8E-28 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APY29_RS18395 47941950f26c14daab9eaf4e255d2e5d 322 Gene3D G3DSA:3.20.20.70 5 320 1.2E-102 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS18395 47941950f26c14daab9eaf4e255d2e5d 322 ProSitePatterns PS01054 Transaldolase signature 1. 34 42 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 APY29_RS18395 47941950f26c14daab9eaf4e255d2e5d 322 ProSitePatterns PS00958 Transaldolase active site. 133 150 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 APY29_RS18395 47941950f26c14daab9eaf4e255d2e5d 322 SUPERFAMILY SSF51569 6 320 1.04E-96 T 28-03-2018 APY29_RS18395 47941950f26c14daab9eaf4e255d2e5d 322 Hamap MF_00492 Transaldolase [tal]. 5 320 48.019 T 28-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 APY29_RS18395 47941950f26c14daab9eaf4e255d2e5d 322 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 17 316 1.0E-90 T 28-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 APY29_RS18395 47941950f26c14daab9eaf4e255d2e5d 322 TIGRFAM TIGR00874 talAB: transaldolase 7 320 7.6E-120 T 28-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 APY29_RS01840 babcd4b43d34d6fb1573aa129e2a7942 336 Gene3D G3DSA:3.40.50.880 15 223 2.1E-51 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS01840 babcd4b43d34d6fb1573aa129e2a7942 336 SUPERFAMILY SSF46689 277 325 1.43E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS01840 babcd4b43d34d6fb1573aa129e2a7942 336 SUPERFAMILY SSF46689 224 274 1.89E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS01840 babcd4b43d34d6fb1573aa129e2a7942 336 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 277 319 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APY29_RS01840 babcd4b43d34d6fb1573aa129e2a7942 336 Pfam PF12833 Helix-turn-helix domain 246 324 5.2E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS01840 babcd4b43d34d6fb1573aa129e2a7942 336 Gene3D G3DSA:1.10.10.60 224 282 6.1E-12 T 28-03-2018 APY29_RS01840 babcd4b43d34d6fb1573aa129e2a7942 336 SMART SM00342 240 323 3.6E-26 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS01840 babcd4b43d34d6fb1573aa129e2a7942 336 Pfam PF01965 DJ-1/PfpI family 49 183 5.9E-15 T 28-03-2018 IPR002818 DJ-1/PfpI APY29_RS01840 babcd4b43d34d6fb1573aa129e2a7942 336 Gene3D G3DSA:1.10.10.60 283 330 4.9E-13 T 28-03-2018 APY29_RS01840 babcd4b43d34d6fb1573aa129e2a7942 336 SUPERFAMILY SSF52317 17 205 2.04E-44 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS07275 e26805c01ef10c77da8b3db2418a62ea 282 PIRSF PIRSF005052 1 282 2.1E-110 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 APY29_RS07275 e26805c01ef10c77da8b3db2418a62ea 282 SUPERFAMILY SSF52540 2 150 3.41E-10 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS07275 e26805c01ef10c77da8b3db2418a62ea 282 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 282 37.078 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 APY29_RS07275 e26805c01ef10c77da8b3db2418a62ea 282 Pfam PF03668 P-loop ATPase protein family 1 279 7.6E-95 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 APY29_RS07275 e26805c01ef10c77da8b3db2418a62ea 282 Gene3D G3DSA:3.40.50.300 1 151 4.0E-6 T 28-03-2018 APY29_RS07015 e65f5686086a45b4337f97cee1dba533 180 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 27.32 T 28-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 APY29_RS07015 e65f5686086a45b4337f97cee1dba533 180 SUPERFAMILY SSF52540 5 165 1.33E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS07015 e65f5686086a45b4337f97cee1dba533 180 Pfam PF01202 Shikimate kinase 13 167 1.1E-47 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 APY29_RS07015 e65f5686086a45b4337f97cee1dba533 180 PRINTS PR01100 Shikimate kinase family signature 7 22 7.0E-22 T 28-03-2018 APY29_RS07015 e65f5686086a45b4337f97cee1dba533 180 PRINTS PR01100 Shikimate kinase family signature 31 44 7.0E-22 T 28-03-2018 APY29_RS07015 e65f5686086a45b4337f97cee1dba533 180 PRINTS PR01100 Shikimate kinase family signature 77 86 7.0E-22 T 28-03-2018 APY29_RS07015 e65f5686086a45b4337f97cee1dba533 180 PRINTS PR01100 Shikimate kinase family signature 59 67 7.0E-22 T 28-03-2018 APY29_RS07015 e65f5686086a45b4337f97cee1dba533 180 PRINTS PR01100 Shikimate kinase family signature 98 115 7.0E-22 T 28-03-2018 APY29_RS07015 e65f5686086a45b4337f97cee1dba533 180 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 28-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 APY29_RS07015 e65f5686086a45b4337f97cee1dba533 180 Gene3D G3DSA:3.40.50.300 4 179 4.3E-33 T 28-03-2018 APY29_RS15175 7700e739f6cc4c2254efb488ad30b9d7 373 SUPERFAMILY SSF48179 154 254 6.57E-19 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APY29_RS15175 7700e739f6cc4c2254efb488ad30b9d7 373 Pfam PF02153 Prephenate dehydrogenase 46 252 1.6E-24 T 28-03-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 APY29_RS15175 7700e739f6cc4c2254efb488ad30b9d7 373 Gene3D G3DSA:3.40.50.720 2 160 7.4E-17 T 28-03-2018 APY29_RS15175 7700e739f6cc4c2254efb488ad30b9d7 373 SUPERFAMILY SSF51735 7 151 4.49E-22 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS15175 7700e739f6cc4c2254efb488ad30b9d7 373 SUPERFAMILY SSF55021 296 362 8.1E-10 T 28-03-2018 APY29_RS15175 7700e739f6cc4c2254efb488ad30b9d7 373 Pfam PF01842 ACT domain 297 347 3.0E-7 T 28-03-2018 IPR002912 ACT domain APY29_RS15175 7700e739f6cc4c2254efb488ad30b9d7 373 Gene3D G3DSA:1.10.3660.10 162 287 1.3E-19 T 28-03-2018 APY29_RS15175 7700e739f6cc4c2254efb488ad30b9d7 373 Gene3D G3DSA:3.30.70.260 290 363 1.8E-8 T 28-03-2018 APY29_RS11040 f8e991da0ca68de22f174efa1c0bf346 764 Pfam PF00873 AcrB/AcrD/AcrF family 4 762 7.0E-135 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS11040 f8e991da0ca68de22f174efa1c0bf346 764 SUPERFAMILY SSF82693 146 181 1.2E-10 T 28-03-2018 APY29_RS11040 f8e991da0ca68de22f174efa1c0bf346 764 SUPERFAMILY SSF82693 264 306 1.2E-10 T 28-03-2018 APY29_RS11040 f8e991da0ca68de22f174efa1c0bf346 764 SUPERFAMILY SSF82714 183 260 1.57E-10 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS11040 f8e991da0ca68de22f174efa1c0bf346 764 Gene3D G3DSA:1.20.1640.10 265 490 1.2E-38 T 28-03-2018 APY29_RS11040 f8e991da0ca68de22f174efa1c0bf346 764 SUPERFAMILY SSF82714 692 762 3.66E-11 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS11040 f8e991da0ca68de22f174efa1c0bf346 764 SUPERFAMILY SSF82866 292 487 4.05E-34 T 28-03-2018 APY29_RS11040 f8e991da0ca68de22f174efa1c0bf346 764 PRINTS PR00702 Acriflavin resistance protein family signature 327 350 1.1E-36 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS11040 f8e991da0ca68de22f174efa1c0bf346 764 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 1.1E-36 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS11040 f8e991da0ca68de22f174efa1c0bf346 764 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.1E-36 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS11040 f8e991da0ca68de22f174efa1c0bf346 764 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.1E-36 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS11040 f8e991da0ca68de22f174efa1c0bf346 764 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.1E-36 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS11040 f8e991da0ca68de22f174efa1c0bf346 764 PRINTS PR00702 Acriflavin resistance protein family signature 354 375 1.1E-36 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS11040 f8e991da0ca68de22f174efa1c0bf346 764 SUPERFAMILY SSF82693 40 135 1.31E-17 T 28-03-2018 APY29_RS11040 f8e991da0ca68de22f174efa1c0bf346 764 Gene3D G3DSA:3.30.70.1430 40 142 4.4E-19 T 28-03-2018 APY29_RS11040 f8e991da0ca68de22f174efa1c0bf346 764 Gene3D G3DSA:3.30.2090.10 688 764 6.0E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS11040 f8e991da0ca68de22f174efa1c0bf346 764 Gene3D G3DSA:3.30.2090.10 181 264 1.0E-12 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS10730 b2792da1a5342f40acb83dfad8ba38af 414 SUPERFAMILY SSF53474 53 410 1.17E-52 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS10730 b2792da1a5342f40acb83dfad8ba38af 414 Gene3D G3DSA:3.40.50.1820 154 411 3.2E-26 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS10730 b2792da1a5342f40acb83dfad8ba38af 414 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 72 281 9.3E-10 T 28-03-2018 IPR010520 UPF0255 family APY29_RS10730 b2792da1a5342f40acb83dfad8ba38af 414 Gene3D G3DSA:1.20.1440.110 42 152 4.4E-22 T 28-03-2018 APY29_RS19300 d438295aa40bbf5ad4601e8695a143cc 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 APY29_RS19300 d438295aa40bbf5ad4601e8695a143cc 369 SUPERFAMILY SSF50129 318 369 2.82E-12 T 28-03-2018 IPR011032 GroES-like APY29_RS19300 d438295aa40bbf5ad4601e8695a143cc 369 SMART SM00829 10 367 0.0041 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APY29_RS19300 d438295aa40bbf5ad4601e8695a143cc 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 4.8E-224 T 28-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 APY29_RS19300 d438295aa40bbf5ad4601e8695a143cc 369 SUPERFAMILY SSF51735 160 333 1.47E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS19300 d438295aa40bbf5ad4601e8695a143cc 369 Gene3D G3DSA:3.40.50.720 189 310 5.6E-25 T 28-03-2018 APY29_RS19300 d438295aa40bbf5ad4601e8695a143cc 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 151 1.1E-25 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APY29_RS19300 d438295aa40bbf5ad4601e8695a143cc 369 Pfam PF00107 Zinc-binding dehydrogenase 197 329 8.2E-24 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APY29_RS19300 d438295aa40bbf5ad4601e8695a143cc 369 Gene3D G3DSA:3.90.180.10 1 188 3.3E-59 T 28-03-2018 APY29_RS19300 d438295aa40bbf5ad4601e8695a143cc 369 SUPERFAMILY SSF50129 1 187 3.2E-72 T 28-03-2018 IPR011032 GroES-like APY29_RS11135 be9d3a114610420ea6bdbc62d526a731 413 Pfam PF12704 MacB-like periplasmic core domain 28 229 9.5E-18 T 28-03-2018 IPR025857 MacB-like periplasmic core domain APY29_RS11135 be9d3a114610420ea6bdbc62d526a731 413 Pfam PF02687 FtsX-like permease family 300 406 7.6E-12 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 APY29_RS11135 be9d3a114610420ea6bdbc62d526a731 413 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 1.0E-139 T 28-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 APY29_RS22095 cb4957901fbdaa73a1b0805c4c4b07b8 480 SUPERFAMILY SSF55874 364 476 9.99E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS22095 cb4957901fbdaa73a1b0805c4c4b07b8 480 SUPERFAMILY SSF47384 263 328 4.12E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS22095 cb4957901fbdaa73a1b0805c4c4b07b8 480 SMART SM00388 268 334 4.0E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS22095 cb4957901fbdaa73a1b0805c4c4b07b8 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 268 326 2.1E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS22095 cb4957901fbdaa73a1b0805c4c4b07b8 480 Gene3D G3DSA:3.30.565.10 323 480 2.1E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS22095 cb4957901fbdaa73a1b0805c4c4b07b8 480 Gene3D G3DSA:1.10.287.130 256 322 7.5E-8 T 28-03-2018 APY29_RS22095 cb4957901fbdaa73a1b0805c4c4b07b8 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 9.3E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS22095 cb4957901fbdaa73a1b0805c4c4b07b8 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 9.3E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS22095 cb4957901fbdaa73a1b0805c4c4b07b8 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 439 9.3E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS22095 cb4957901fbdaa73a1b0805c4c4b07b8 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 476 8.3E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS22095 cb4957901fbdaa73a1b0805c4c4b07b8 480 SMART SM00387 374 479 7.9E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS06015 d97b0dddc49698ea19f0986a2b215ace 592 SUPERFAMILY SSF48208 204 588 8.32E-91 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 APY29_RS06015 d97b0dddc49698ea19f0986a2b215ace 592 Pfam PF00723 Glycosyl hydrolases family 15 220 522 6.6E-22 T 28-03-2018 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: R-HSA-70221 APY29_RS06015 d97b0dddc49698ea19f0986a2b215ace 592 Gene3D G3DSA:1.50.10.10 190 549 2.0E-82 T 28-03-2018 APY29_RS16355 0368a24f3b0308b4cf6478489e4a85e7 265 Gene3D G3DSA:3.30.470.10 9 91 6.5E-13 T 28-03-2018 APY29_RS16355 0368a24f3b0308b4cf6478489e4a85e7 265 SUPERFAMILY SSF56752 12 244 5.62E-40 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 APY29_RS16355 0368a24f3b0308b4cf6478489e4a85e7 265 Gene3D G3DSA:3.20.10.10 110 259 6.0E-24 T 28-03-2018 APY29_RS16355 0368a24f3b0308b4cf6478489e4a85e7 265 Pfam PF01063 Amino-transferase class IV 25 229 9.6E-35 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 APY29_RS21555 b6d94b5f6f46552392706c902dcbd0cb 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 159 1.6E-35 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 APY29_RS21555 b6d94b5f6f46552392706c902dcbd0cb 292 Gene3D G3DSA:3.40.50.720 1 174 2.1E-27 T 28-03-2018 APY29_RS21555 b6d94b5f6f46552392706c902dcbd0cb 292 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 28-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 APY29_RS21555 b6d94b5f6f46552392706c902dcbd0cb 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 280 4.2E-15 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 APY29_RS21555 b6d94b5f6f46552392706c902dcbd0cb 292 SUPERFAMILY SSF48179 165 283 8.16E-24 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APY29_RS21555 b6d94b5f6f46552392706c902dcbd0cb 292 Gene3D G3DSA:1.10.1040.10 175 290 6.5E-20 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APY29_RS21555 b6d94b5f6f46552392706c902dcbd0cb 292 SUPERFAMILY SSF51735 1 160 6.15E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS21555 b6d94b5f6f46552392706c902dcbd0cb 292 PIRSF PIRSF000103 1 292 3.3E-75 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 APY29_RS09345 1517272035628f7148dccd3be072ddd5 81 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 80 4.7E-22 T 28-03-2018 APY29_RS09345 1517272035628f7148dccd3be072ddd5 81 Gene3D G3DSA:3.10.20.30 1 80 1.4E-9 T 28-03-2018 IPR012675 Beta-grasp domain APY29_RS09345 1517272035628f7148dccd3be072ddd5 81 SUPERFAMILY SSF54292 5 80 7.21E-19 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APY29_RS16685 b5dd9700f03304f49a2be6979ba1673e 943 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS16685 b5dd9700f03304f49a2be6979ba1673e 943 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 3 934 21.039 T 28-03-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 APY29_RS16685 b5dd9700f03304f49a2be6979ba1673e 943 Gene3D G3DSA:3.30.2320.20 818 907 7.4E-15 T 28-03-2018 APY29_RS16685 b5dd9700f03304f49a2be6979ba1673e 943 SUPERFAMILY SSF50677 205 421 4.06E-43 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 APY29_RS16685 b5dd9700f03304f49a2be6979ba1673e 943 Gene3D G3DSA:3.40.50.620 43 119 6.6E-25 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS16685 b5dd9700f03304f49a2be6979ba1673e 943 Gene3D G3DSA:3.90.740.10 190 405 1.5E-48 T 28-03-2018 APY29_RS16685 b5dd9700f03304f49a2be6979ba1673e 943 SUPERFAMILY SSF47323 668 934 4.3E-68 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS16685 b5dd9700f03304f49a2be6979ba1673e 943 SUPERFAMILY SSF52374 5 203 1.25E-132 T 28-03-2018 APY29_RS16685 b5dd9700f03304f49a2be6979ba1673e 943 SUPERFAMILY SSF52374 421 662 1.25E-132 T 28-03-2018 APY29_RS16685 b5dd9700f03304f49a2be6979ba1673e 943 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 858 7.3E-267 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 APY29_RS16685 b5dd9700f03304f49a2be6979ba1673e 943 Pfam PF06827 Zinc finger found in FPG and IleRS 905 931 3.4E-7 T 28-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 APY29_RS16685 b5dd9700f03304f49a2be6979ba1673e 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 577 586 1.9E-30 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 APY29_RS16685 b5dd9700f03304f49a2be6979ba1673e 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 240 263 1.9E-30 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 APY29_RS16685 b5dd9700f03304f49a2be6979ba1673e 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 52 63 1.9E-30 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 APY29_RS16685 b5dd9700f03304f49a2be6979ba1673e 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 419 434 1.9E-30 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 APY29_RS16685 b5dd9700f03304f49a2be6979ba1673e 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 544 557 1.9E-30 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 APY29_RS16685 b5dd9700f03304f49a2be6979ba1673e 943 Gene3D G3DSA:3.40.50.620 406 606 3.6E-51 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS16685 b5dd9700f03304f49a2be6979ba1673e 943 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 29 657 8.4E-196 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS16685 b5dd9700f03304f49a2be6979ba1673e 943 Pfam PF08264 Anticodon-binding domain of tRNA 701 855 7.8E-27 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 APY29_RS16685 b5dd9700f03304f49a2be6979ba1673e 943 Gene3D G3DSA:1.10.730.10 607 810 2.3E-47 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS07990 4c35da6fed6e807fe8ca8818c41af82e 793 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 166 7.5E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS07990 4c35da6fed6e807fe8ca8818c41af82e 793 Gene3D G3DSA:2.170.130.10 31 177 8.1E-21 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS07990 4c35da6fed6e807fe8ca8818c41af82e 793 SUPERFAMILY SSF56935 35 793 8.55E-94 T 28-03-2018 APY29_RS07990 4c35da6fed6e807fe8ca8818c41af82e 793 Pfam PF00593 TonB dependent receptor 368 792 6.2E-31 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS07990 4c35da6fed6e807fe8ca8818c41af82e 793 Gene3D G3DSA:2.40.170.20 178 792 8.3E-54 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS19330 c2f0a939b50862f17b7378ac4c51ce8c 454 PIRSF PIRSF017901 2 454 2.3E-184 T 28-03-2018 IPR035434 Glutamate--cysteine ligase, bacteria and plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 APY29_RS19330 c2f0a939b50862f17b7378ac4c51ce8c 454 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 11 454 2.0E-210 T 28-03-2018 IPR011556 Glutamate--cysteine ligase, plant-type GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 APY29_RS19330 c2f0a939b50862f17b7378ac4c51ce8c 454 SUPERFAMILY SSF55931 304 452 1.47E-69 T 28-03-2018 APY29_RS19330 c2f0a939b50862f17b7378ac4c51ce8c 454 SUPERFAMILY SSF55931 25 265 1.47E-69 T 28-03-2018 APY29_RS19330 c2f0a939b50862f17b7378ac4c51ce8c 454 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 58 357 8.7E-93 T 28-03-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 APY29_RS16140 0691ce5233a84340051d28aae407867d 240 Gene3D G3DSA:1.20.120.160 140 239 6.0E-9 T 28-03-2018 APY29_RS16140 0691ce5233a84340051d28aae407867d 240 Gene3D G3DSA:3.40.50.2300 2 132 3.4E-26 T 28-03-2018 APY29_RS16140 0691ce5233a84340051d28aae407867d 240 SUPERFAMILY SSF52172 10 129 5.55E-27 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS16140 0691ce5233a84340051d28aae407867d 240 SMART SM00448 11 122 5.0E-16 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS16140 0691ce5233a84340051d28aae407867d 240 Pfam PF00072 Response regulator receiver domain 14 123 5.9E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS16140 0691ce5233a84340051d28aae407867d 240 SUPERFAMILY SSF47226 108 219 6.02E-10 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS16140 0691ce5233a84340051d28aae407867d 240 Pfam PF01627 Hpt domain 165 220 3.5E-5 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS03970 8c27edd932be5cdaac1dc20a4d09f347 621 Gene3D G3DSA:3.90.1720.10 217 390 1.1E-5 T 28-03-2018 APY29_RS03970 8c27edd932be5cdaac1dc20a4d09f347 621 Gene3D G3DSA:1.10.530.10 1 183 4.6E-12 T 28-03-2018 APY29_RS03970 8c27edd932be5cdaac1dc20a4d09f347 621 SUPERFAMILY SSF53955 2 78 6.61E-9 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS03970 8c27edd932be5cdaac1dc20a4d09f347 621 SUPERFAMILY SSF47090 421 491 5.76E-18 T 28-03-2018 IPR002477 Peptidoglycan binding-like APY29_RS03970 8c27edd932be5cdaac1dc20a4d09f347 621 Pfam PF01471 Putative peptidoglycan binding domain 429 490 4.4E-17 T 28-03-2018 IPR002477 Peptidoglycan binding-like APY29_RS03970 8c27edd932be5cdaac1dc20a4d09f347 621 Gene3D G3DSA:1.20.141.10 469 556 1.1E-14 T 28-03-2018 APY29_RS03970 8c27edd932be5cdaac1dc20a4d09f347 621 Gene3D G3DSA:1.20.141.10 391 468 2.0E-9 T 28-03-2018 APY29_RS19610 1c03572fd439ff4373bf93e586035ec0 467 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 172 410 6.0E-68 T 28-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 APY29_RS19610 1c03572fd439ff4373bf93e586035ec0 467 SUPERFAMILY SSF51690 171 464 1.43E-46 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 APY29_RS19610 1c03572fd439ff4373bf93e586035ec0 467 Gene3D G3DSA:3.20.140.10 2 433 3.9E-82 T 28-03-2018 APY29_RS19610 1c03572fd439ff4373bf93e586035ec0 467 PIRSF PIRSF005943 1 467 1.2E-197 T 28-03-2018 IPR016471 Nicotinamide phosphoribosyl transferase Reactome: R-HSA-1368108|Reactome: R-HSA-197264 APY29_RS19720 27e29df36bfc53aad12c5e1236f9d85e 794 Gene3D G3DSA:2.170.130.10 33 181 3.7E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS19720 27e29df36bfc53aad12c5e1236f9d85e 794 Pfam PF00593 TonB dependent receptor 266 792 7.8E-46 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS19720 27e29df36bfc53aad12c5e1236f9d85e 794 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 172 1.1E-9 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS19720 27e29df36bfc53aad12c5e1236f9d85e 794 Gene3D G3DSA:2.40.170.20 182 793 9.8E-73 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS19720 27e29df36bfc53aad12c5e1236f9d85e 794 SUPERFAMILY SSF56935 33 792 6.96E-91 T 28-03-2018 APY29_RS10325 2c5e35493602f866f81f3bab3aa20d36 145 SUPERFAMILY SSF82649 15 143 3.24E-42 T 28-03-2018 APY29_RS10325 2c5e35493602f866f81f3bab3aa20d36 145 Gene3D G3DSA:3.90.1010.10 6 144 4.2E-46 T 28-03-2018 APY29_RS10325 2c5e35493602f866f81f3bab3aa20d36 145 Pfam PF02657 Fe-S metabolism associated domain 21 138 9.2E-43 T 28-03-2018 IPR003808 Fe-S metabolism associated domain, SufE-like APY29_RS00955 f7ff7ad86a7f941543afa57f023e4475 107 Gene3D G3DSA:2.30.30.110 1 104 1.2E-16 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor APY29_RS00955 f7ff7ad86a7f941543afa57f023e4475 107 SUPERFAMILY SSF50118 2 105 2.94E-24 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor APY29_RS00955 f7ff7ad86a7f941543afa57f023e4475 107 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 2 102 2.1E-18 T 28-03-2018 IPR003477 mRNA interferase PemK-like GO:0003677 APY29_RS07235 4fc62f93e0fe64c5f15bffdfd563677f 338 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 214 2.7E-40 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APY29_RS07235 4fc62f93e0fe64c5f15bffdfd563677f 338 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 326 2.9E-91 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APY29_RS23780 747a094ca429422d1c3cef1b5a8614c2 424 SUPERFAMILY SSF56349 118 306 6.77E-35 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APY29_RS23780 747a094ca429422d1c3cef1b5a8614c2 424 SUPERFAMILY SSF47823 7 96 6.67E-23 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal APY29_RS23780 747a094ca429422d1c3cef1b5a8614c2 424 Gene3D G3DSA:1.10.443.10 100 300 1.3E-21 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS23780 747a094ca429422d1c3cef1b5a8614c2 424 Pfam PF00589 Phage integrase family 135 295 1.3E-10 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS23780 747a094ca429422d1c3cef1b5a8614c2 424 Gene3D G3DSA:1.10.150.130 1 99 1.5E-7 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal APY29_RS12250 747a094ca429422d1c3cef1b5a8614c2 424 SUPERFAMILY SSF56349 118 306 6.77E-35 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APY29_RS12250 747a094ca429422d1c3cef1b5a8614c2 424 SUPERFAMILY SSF47823 7 96 6.67E-23 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal APY29_RS12250 747a094ca429422d1c3cef1b5a8614c2 424 Gene3D G3DSA:1.10.443.10 100 300 1.3E-21 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS12250 747a094ca429422d1c3cef1b5a8614c2 424 Pfam PF00589 Phage integrase family 135 295 1.3E-10 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS12250 747a094ca429422d1c3cef1b5a8614c2 424 Gene3D G3DSA:1.10.150.130 1 99 1.5E-7 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal APY29_RS11635 baa46fde0886c3cd8c3d362ef7b2f829 521 SUPERFAMILY SSF53335 445 519 6.09E-56 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS11635 baa46fde0886c3cd8c3d362ef7b2f829 521 SUPERFAMILY SSF53335 11 216 6.09E-56 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS11635 baa46fde0886c3cd8c3d362ef7b2f829 521 SUPERFAMILY SSF53335 269 352 6.09E-56 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS11635 baa46fde0886c3cd8c3d362ef7b2f829 521 Pfam PF00145 C-5 cytosine-specific DNA methylase 13 201 4.5E-27 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS11635 baa46fde0886c3cd8c3d362ef7b2f829 521 Pfam PF00145 C-5 cytosine-specific DNA methylase 461 516 8.5E-7 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS11635 baa46fde0886c3cd8c3d362ef7b2f829 521 Gene3D G3DSA:3.90.120.10 197 506 4.3E-18 T 28-03-2018 APY29_RS11635 baa46fde0886c3cd8c3d362ef7b2f829 521 Gene3D G3DSA:3.40.50.150 9 196 4.0E-36 T 28-03-2018 APY29_RS11635 baa46fde0886c3cd8c3d362ef7b2f829 521 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 75 87 - T 28-03-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 APY29_RS20685 ac3932b227fa4459ce9495a77eaab75a 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 154.107 T 28-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 APY29_RS20685 ac3932b227fa4459ce9495a77eaab75a 264 Gene3D G3DSA:3.60.90.10 37 190 1.6E-45 T 28-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 APY29_RS20685 ac3932b227fa4459ce9495a77eaab75a 264 PIRSF PIRSF001356 2 264 2.7E-147 T 28-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 APY29_RS20685 ac3932b227fa4459ce9495a77eaab75a 264 SUPERFAMILY SSF56276 47 175 1.77E-24 T 28-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 APY29_RS20685 ac3932b227fa4459ce9495a77eaab75a 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 7 262 6.0E-142 T 28-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 APY29_RS20685 ac3932b227fa4459ce9495a77eaab75a 264 Pfam PF02675 S-adenosylmethionine decarboxylase 42 170 6.3E-31 T 28-03-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 APY29_RS15230 f5fac771a8216d7ad8a504e771a6184a 143 SUPERFAMILY SSF55961 1 140 3.06E-33 T 28-03-2018 APY29_RS15230 f5fac771a8216d7ad8a504e771a6184a 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 2.6E-25 T 28-03-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 APY29_RS15230 f5fac771a8216d7ad8a504e771a6184a 143 Gene3D G3DSA:3.30.530.20 1 142 3.0E-26 T 28-03-2018 IPR023393 START-like domain APY29_RS14655 4c89739681f5954328b85586f9cc1086 464 Gene3D G3DSA:3.30.930.10 126 460 9.1E-91 T 28-03-2018 APY29_RS14655 4c89739681f5954328b85586f9cc1086 464 SUPERFAMILY SSF50249 16 100 7.43E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS14655 4c89739681f5954328b85586f9cc1086 464 Pfam PF01336 OB-fold nucleic acid binding domain 20 97 4.5E-10 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APY29_RS14655 4c89739681f5954328b85586f9cc1086 464 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 4 464 45.127 T 28-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 APY29_RS14655 4c89739681f5954328b85586f9cc1086 464 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 457 3.6E-80 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS14655 4c89739681f5954328b85586f9cc1086 464 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 16 464 1.2E-189 T 28-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 APY29_RS14655 4c89739681f5954328b85586f9cc1086 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 206 218 9.2E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS14655 4c89739681f5954328b85586f9cc1086 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 379 395 9.2E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS14655 4c89739681f5954328b85586f9cc1086 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 222 235 9.2E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS14655 4c89739681f5954328b85586f9cc1086 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 419 433 9.2E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS14655 4c89739681f5954328b85586f9cc1086 464 Gene3D G3DSA:2.40.50.140 7 105 7.5E-17 T 28-03-2018 APY29_RS14655 4c89739681f5954328b85586f9cc1086 464 SUPERFAMILY SSF55681 103 462 4.56E-94 T 28-03-2018 APY29_RS15805 acc667cdacf4b271af2094ab45f99130 465 PIRSF PIRSF006060 1 465 4.1E-74 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APY29_RS15805 acc667cdacf4b271af2094ab45f99130 465 Pfam PF00324 Amino acid permease 20 449 1.3E-107 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APY29_RS15805 acc667cdacf4b271af2094ab45f99130 465 ProSitePatterns PS00218 Amino acid permeases signature. 45 76 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APY29_RS09905 814f1265fee83fd3ae138028eece6f07 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 193 1.1E-6 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal APY29_RS09905 814f1265fee83fd3ae138028eece6f07 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.6E-12 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APY29_RS09905 814f1265fee83fd3ae138028eece6f07 211 SUPERFAMILY SSF52833 10 111 3.12E-21 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS09905 814f1265fee83fd3ae138028eece6f07 211 SUPERFAMILY SSF47616 82 207 2.56E-24 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like APY29_RS09905 814f1265fee83fd3ae138028eece6f07 211 Gene3D G3DSA:3.40.30.10 2 96 1.3E-22 T 28-03-2018 APY29_RS09905 814f1265fee83fd3ae138028eece6f07 211 Gene3D G3DSA:1.20.1050.10 97 208 1.3E-15 T 28-03-2018 APY29_RS11440 55aa4beb20fd11a1c240d24c718d9e79 960 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 51 944 0.0 T 28-03-2018 IPR022303 Conjugative transfer ATPase APY29_RS11440 55aa4beb20fd11a1c240d24c718d9e79 960 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 62 335 1.6E-72 T 28-03-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase APY29_RS11440 55aa4beb20fd11a1c240d24c718d9e79 960 Gene3D G3DSA:3.40.50.300 525 892 2.6E-16 T 28-03-2018 APY29_RS11440 55aa4beb20fd11a1c240d24c718d9e79 960 SUPERFAMILY SSF52540 478 606 5.94E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11440 55aa4beb20fd11a1c240d24c718d9e79 960 SUPERFAMILY SSF52540 640 896 5.94E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS12090 d84aa97fafeaab8817f35b8516c91b86 232 Gene3D G3DSA:2.60.120.200 40 223 6.6E-35 T 28-03-2018 APY29_RS12090 d84aa97fafeaab8817f35b8516c91b86 232 SUPERFAMILY SSF49899 47 220 3.44E-28 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain APY29_RS12090 d84aa97fafeaab8817f35b8516c91b86 232 Pfam PF07081 Protein of unknown function (DUF1349) 48 221 6.7E-62 T 28-03-2018 IPR009784 Protein of unknown function DUF1349 APY29_RS12090 d84aa97fafeaab8817f35b8516c91b86 232 PIRSF PIRSF022704 35 232 7.9E-70 T 28-03-2018 IPR015987 Uncharacterised conserved protein UCP022704 APY29_RS13530 6e79ba493edefc842888c74124b5877f 434 Pfam PF14821 Threonine synthase N terminus 2 75 6.1E-13 T 28-03-2018 IPR029144 Threonine synthase, N-terminal APY29_RS13530 6e79ba493edefc842888c74124b5877f 434 TIGRFAM TIGR00260 thrC: threonine synthase 69 398 3.1E-69 T 28-03-2018 IPR004450 Threonine synthase-like APY29_RS13530 6e79ba493edefc842888c74124b5877f 434 Gene3D G3DSA:3.40.50.1100 195 319 3.2E-35 T 28-03-2018 APY29_RS13530 6e79ba493edefc842888c74124b5877f 434 Gene3D G3DSA:3.40.50.1100 320 401 7.4E-16 T 28-03-2018 APY29_RS13530 6e79ba493edefc842888c74124b5877f 434 Gene3D G3DSA:3.90.1380.10 1 78 7.1E-15 T 28-03-2018 IPR029144 Threonine synthase, N-terminal APY29_RS13530 6e79ba493edefc842888c74124b5877f 434 SUPERFAMILY SSF53686 2 430 6.16E-121 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APY29_RS13530 6e79ba493edefc842888c74124b5877f 434 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 93 370 3.1E-20 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APY29_RS13530 6e79ba493edefc842888c74124b5877f 434 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 93 107 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 APY29_RS13530 6e79ba493edefc842888c74124b5877f 434 Gene3D G3DSA:3.40.50.1100 97 194 9.5E-20 T 28-03-2018 APY29_RS05620 19d5cfc3b33faf61a439400648f9c634 568 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 468 484 - T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 APY29_RS05620 19d5cfc3b33faf61a439400648f9c634 568 SUPERFAMILY SSF56014 135 332 5.89E-53 T 28-03-2018 APY29_RS05620 19d5cfc3b33faf61a439400648f9c634 568 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 1 566 55.882 T 28-03-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 APY29_RS05620 19d5cfc3b33faf61a439400648f9c634 568 SUPERFAMILY SSF55124 334 410 7.03E-18 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 APY29_RS05620 19d5cfc3b33faf61a439400648f9c634 568 PRINTS PR00397 Sirohaem Fe-binding site signature 468 486 1.4E-8 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 APY29_RS05620 19d5cfc3b33faf61a439400648f9c634 568 PRINTS PR00397 Sirohaem Fe-binding site signature 420 438 1.4E-8 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 APY29_RS05620 19d5cfc3b33faf61a439400648f9c634 568 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 340 404 3.6E-13 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 APY29_RS05620 19d5cfc3b33faf61a439400648f9c634 568 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 63 125 6.1E-16 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 APY29_RS05620 19d5cfc3b33faf61a439400648f9c634 568 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 422 550 0.054 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 APY29_RS05620 19d5cfc3b33faf61a439400648f9c634 568 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 162 316 3.0E-41 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 APY29_RS05620 19d5cfc3b33faf61a439400648f9c634 568 SUPERFAMILY SSF55124 4 134 9.49E-30 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 APY29_RS05620 19d5cfc3b33faf61a439400648f9c634 568 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 6 551 1.5E-267 T 28-03-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 APY29_RS05620 19d5cfc3b33faf61a439400648f9c634 568 SUPERFAMILY SSF56014 419 552 1.7E-32 T 28-03-2018 APY29_RS05620 19d5cfc3b33faf61a439400648f9c634 568 Gene3D G3DSA:3.30.413.10 130 334 8.1E-47 T 28-03-2018 APY29_RS05620 19d5cfc3b33faf61a439400648f9c634 568 Gene3D G3DSA:3.30.413.10 66 129 0.089 T 28-03-2018 APY29_RS05620 19d5cfc3b33faf61a439400648f9c634 568 Gene3D G3DSA:3.30.413.10 416 553 2.6E-26 T 28-03-2018 APY29_RS01050 d0229f35d137a5ee2972d53694b722df 146 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 1 131 1.0E-5 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 APY29_RS01050 d0229f35d137a5ee2972d53694b722df 146 SUPERFAMILY SSF52304 2 134 8.9E-19 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 APY29_RS01050 d0229f35d137a5ee2972d53694b722df 146 Gene3D G3DSA:3.40.50.9100 1 136 3.7E-13 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 APY29_RS04065 4c31a6799536f543710b24f031fceef0 117 PIRSF PIRSF006113 1 117 3.0E-48 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 APY29_RS04065 4c31a6799536f543710b24f031fceef0 117 SUPERFAMILY SSF55620 3 117 1.5E-39 T 28-03-2018 APY29_RS04065 4c31a6799536f543710b24f031fceef0 117 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 94 1.3E-32 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 APY29_RS04065 4c31a6799536f543710b24f031fceef0 117 Gene3D G3DSA:3.30.479.10 1 117 9.9E-41 T 28-03-2018 APY29_RS04065 4c31a6799536f543710b24f031fceef0 117 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 116 3.1E-35 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 APY29_RS04720 04bd520a24859602ff4f8c4751f4cd36 423 Pfam PF00155 Aminotransferase class I and II 39 390 2.6E-51 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APY29_RS04720 04bd520a24859602ff4f8c4751f4cd36 423 Gene3D G3DSA:3.90.1150.10 286 410 1.8E-18 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS04720 04bd520a24859602ff4f8c4751f4cd36 423 SUPERFAMILY SSF53383 10 405 1.13E-90 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS04720 04bd520a24859602ff4f8c4751f4cd36 423 Gene3D G3DSA:3.40.640.10 55 285 5.6E-50 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS00410 de8e344278d20da3cc55239b54736f49 195 Gene3D G3DSA:3.90.1340.10 1 54 9.9E-22 T 28-03-2018 IPR011083 Phage tail collar domain APY29_RS00410 de8e344278d20da3cc55239b54736f49 195 SUPERFAMILY SSF88874 1 186 3.79E-43 T 28-03-2018 APY29_RS00410 de8e344278d20da3cc55239b54736f49 195 Pfam PF07484 Phage Tail Collar Domain 7 63 1.4E-25 T 28-03-2018 IPR011083 Phage tail collar domain APY29_RS00410 de8e344278d20da3cc55239b54736f49 195 Gene3D G3DSA:4.10.1070.10 55 175 1.1E-5 T 28-03-2018 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 Gene3D G3DSA:3.30.70.1430 558 657 5.2E-11 T 28-03-2018 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 SUPERFAMILY SSF82693 136 181 6.8E-22 T 28-03-2018 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 SUPERFAMILY SSF82693 268 324 6.8E-22 T 28-03-2018 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 Pfam PF00873 AcrB/AcrD/AcrF family 4 1013 3.1E-300 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 Gene3D G3DSA:3.30.2090.10 180 267 1.5E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 SUPERFAMILY SSF82866 291 490 1.29E-46 T 28-03-2018 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 SUPERFAMILY SSF82866 795 1016 3.27E-50 T 28-03-2018 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 SUPERFAMILY SSF82693 40 134 1.52E-22 T 28-03-2018 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 Gene3D G3DSA:1.20.1640.10 831 1026 2.6E-42 T 28-03-2018 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 Gene3D G3DSA:3.30.70.1430 40 141 1.9E-25 T 28-03-2018 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.2E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.2E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.2E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 PRINTS PR00702 Acriflavin resistance protein family signature 615 629 1.2E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 1.2E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.2E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.2E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.2E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.2E-76 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 Gene3D G3DSA:3.30.70.1320 756 830 2.6E-7 T 28-03-2018 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 SUPERFAMILY SSF82714 182 265 4.19E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 SUPERFAMILY SSF82714 709 793 5.49E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 SUPERFAMILY SSF82693 556 653 4.08E-14 T 28-03-2018 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 Gene3D G3DSA:1.20.1640.10 268 492 1.6E-43 T 28-03-2018 APY29_RS05645 e177808464a0b35dc2233b62f77c0c96 1041 Gene3D G3DSA:3.30.70.1440 660 755 7.3E-14 T 28-03-2018 APY29_RS04455 44ab368ce7d93cab9b4d3f1e8e72b9ab 579 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 57 165 9.6E-14 T 28-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 APY29_RS04455 44ab368ce7d93cab9b4d3f1e8e72b9ab 579 SUPERFAMILY SSF160246 18 161 3.66E-32 T 28-03-2018 APY29_RS04455 44ab368ce7d93cab9b4d3f1e8e72b9ab 579 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 396 410 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APY29_RS04455 44ab368ce7d93cab9b4d3f1e8e72b9ab 579 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 96 576 5.2E-209 T 28-03-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 APY29_RS04455 44ab368ce7d93cab9b4d3f1e8e72b9ab 579 Gene3D G3DSA:3.30.450.90 166 301 2.0E-48 T 28-03-2018 APY29_RS04455 44ab368ce7d93cab9b4d3f1e8e72b9ab 579 Gene3D G3DSA:3.40.50.300 303 579 1.4E-54 T 28-03-2018 APY29_RS04455 44ab368ce7d93cab9b4d3f1e8e72b9ab 579 Pfam PF00437 Type II/IV secretion system protein 204 468 2.3E-87 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APY29_RS04455 44ab368ce7d93cab9b4d3f1e8e72b9ab 579 SUPERFAMILY SSF52540 186 576 1.49E-93 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS04455 44ab368ce7d93cab9b4d3f1e8e72b9ab 579 SMART SM00382 329 450 7.5E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS03815 bc7f781cd80749b1a22da19611dbf72e 186 SMART SM00987 24 179 1.2E-10 T 28-03-2018 APY29_RS03815 bc7f781cd80749b1a22da19611dbf72e 186 SMART SM00986 24 179 1.2E-10 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 APY29_RS03815 bc7f781cd80749b1a22da19611dbf72e 186 Pfam PF03167 Uracil DNA glycosylase superfamily 27 179 5.3E-12 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 APY29_RS03815 bc7f781cd80749b1a22da19611dbf72e 186 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 22 178 1.8E-41 T 28-03-2018 IPR026353 Hypoxanthine-DNA glycosylase APY29_RS03815 bc7f781cd80749b1a22da19611dbf72e 186 SUPERFAMILY SSF52141 23 184 8.28E-40 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 APY29_RS03815 bc7f781cd80749b1a22da19611dbf72e 186 Gene3D G3DSA:3.40.470.10 18 186 7.2E-46 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 APY29_RS02500 d3a4eb8a7ab27a843e20ed045dbf8040 251 SUPERFAMILY SSF51735 3 227 7.54E-60 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS02500 d3a4eb8a7ab27a843e20ed045dbf8040 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 8.2E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS02500 d3a4eb8a7ab27a843e20ed045dbf8040 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 8.2E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS02500 d3a4eb8a7ab27a843e20ed045dbf8040 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 8.2E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS02500 d3a4eb8a7ab27a843e20ed045dbf8040 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.2E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS02500 d3a4eb8a7ab27a843e20ed045dbf8040 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 8.2E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS02500 d3a4eb8a7ab27a843e20ed045dbf8040 251 Pfam PF00106 short chain dehydrogenase 3 187 1.2E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS02500 d3a4eb8a7ab27a843e20ed045dbf8040 251 Gene3D G3DSA:3.40.50.720 2 232 2.8E-56 T 28-03-2018 APY29_RS02500 d3a4eb8a7ab27a843e20ed045dbf8040 251 PIRSF PIRSF000126 1 222 2.1E-50 T 28-03-2018 APY29_RS02500 d3a4eb8a7ab27a843e20ed045dbf8040 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 4.9E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS02500 d3a4eb8a7ab27a843e20ed045dbf8040 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 4.9E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS02500 d3a4eb8a7ab27a843e20ed045dbf8040 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 4.9E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS02500 d3a4eb8a7ab27a843e20ed045dbf8040 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APY29_RS12525 581ed4c2ff7c53196cd5996bbf7a07a8 790 SUPERFAMILY SSF48179 345 458 1.53E-16 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APY29_RS12525 581ed4c2ff7c53196cd5996bbf7a07a8 790 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 195 294 1.5E-9 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 APY29_RS12525 581ed4c2ff7c53196cd5996bbf7a07a8 790 Gene3D G3DSA:3.40.50.720 1 192 1.1E-39 T 28-03-2018 APY29_RS12525 581ed4c2ff7c53196cd5996bbf7a07a8 790 SUPERFAMILY SSF51735 7 193 1.97E-40 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS12525 581ed4c2ff7c53196cd5996bbf7a07a8 790 Gene3D G3DSA:1.10.1040.10 193 300 1.3E-12 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APY29_RS12525 581ed4c2ff7c53196cd5996bbf7a07a8 790 SUPERFAMILY SSF52096 474 787 3.85E-37 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS12525 581ed4c2ff7c53196cd5996bbf7a07a8 790 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 10 192 6.3E-41 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 APY29_RS12525 581ed4c2ff7c53196cd5996bbf7a07a8 790 Gene3D G3DSA:3.90.226.10 473 788 5.5E-35 T 28-03-2018 APY29_RS12525 581ed4c2ff7c53196cd5996bbf7a07a8 790 Gene3D G3DSA:1.10.1040.10 354 437 8.9E-10 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APY29_RS12525 581ed4c2ff7c53196cd5996bbf7a07a8 790 SUPERFAMILY SSF48179 193 311 8.16E-19 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APY29_RS12525 581ed4c2ff7c53196cd5996bbf7a07a8 790 Pfam PF00378 Enoyl-CoA hydratase/isomerase 487 619 1.5E-15 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APY29_RS03715 754633d6885957821df51a95ac649999 237 Pfam PF00849 RNA pseudouridylate synthase 61 137 3.7E-10 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS03715 754633d6885957821df51a95ac649999 237 Gene3D G3DSA:3.10.290.10 1 55 1.8E-5 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS03715 754633d6885957821df51a95ac649999 237 SUPERFAMILY SSF55120 61 226 2.72E-36 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS03715 754633d6885957821df51a95ac649999 237 Gene3D G3DSA:3.30.70.1560 141 210 1.3E-19 T 28-03-2018 APY29_RS03715 754633d6885957821df51a95ac649999 237 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 64 223 5.9E-41 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APY29_RS03715 754633d6885957821df51a95ac649999 237 Gene3D G3DSA:3.30.70.580 59 140 1.0E-10 T 28-03-2018 APY29_RS02430 1659a6054664609f08db80dd74355166 169 PRINTS PR01171 Bacterial lipocalin signature 121 132 1.2E-9 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 APY29_RS02430 1659a6054664609f08db80dd74355166 169 PRINTS PR01171 Bacterial lipocalin signature 148 158 1.2E-9 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 APY29_RS02430 1659a6054664609f08db80dd74355166 169 PRINTS PR01171 Bacterial lipocalin signature 50 59 1.2E-9 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 APY29_RS02430 1659a6054664609f08db80dd74355166 169 PRINTS PR01171 Bacterial lipocalin signature 13 27 1.2E-9 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 APY29_RS02430 1659a6054664609f08db80dd74355166 169 ProSitePatterns PS00213 Lipocalin signature. 14 25 - T 28-03-2018 IPR022272 Lipocalin family conserved site APY29_RS02430 1659a6054664609f08db80dd74355166 169 SUPERFAMILY SSF50814 5 161 5.61E-39 T 28-03-2018 IPR012674 Calycin APY29_RS02430 1659a6054664609f08db80dd74355166 169 PIRSF PIRSF036893 1 168 4.1E-53 T 28-03-2018 IPR022271 Lipocalin, ApoD type APY29_RS02430 1659a6054664609f08db80dd74355166 169 Pfam PF08212 Lipocalin-like domain 13 159 5.9E-55 T 28-03-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain APY29_RS02430 1659a6054664609f08db80dd74355166 169 Gene3D G3DSA:2.40.128.20 2 162 7.5E-35 T 28-03-2018 IPR012674 Calycin APY29_RS22225 44466b8c9d735283ffc08a0087848a7a 690 Gene3D G3DSA:1.25.40.10 320 616 9.1E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS22225 44466b8c9d735283ffc08a0087848a7a 690 SUPERFAMILY SSF48452 29 199 8.93E-29 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS22225 44466b8c9d735283ffc08a0087848a7a 690 Gene3D G3DSA:1.25.40.10 193 303 4.1E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS22225 44466b8c9d735283ffc08a0087848a7a 690 Pfam PF13432 Tetratricopeptide repeat 38 97 1.2E-4 T 28-03-2018 APY29_RS22225 44466b8c9d735283ffc08a0087848a7a 690 Pfam PF13432 Tetratricopeptide repeat 209 270 7.4E-7 T 28-03-2018 APY29_RS22225 44466b8c9d735283ffc08a0087848a7a 690 Pfam PF13432 Tetratricopeptide repeat 105 168 2.1E-5 T 28-03-2018 APY29_RS22225 44466b8c9d735283ffc08a0087848a7a 690 Gene3D G3DSA:1.25.40.10 94 154 5.2E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS22225 44466b8c9d735283ffc08a0087848a7a 690 SUPERFAMILY SSF48452 165 384 1.1E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS22225 44466b8c9d735283ffc08a0087848a7a 690 Gene3D G3DSA:1.25.40.10 4 52 2.9E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS22225 44466b8c9d735283ffc08a0087848a7a 690 Gene3D G3DSA:1.25.40.10 53 93 4.2E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS22225 44466b8c9d735283ffc08a0087848a7a 690 Gene3D G3DSA:1.25.40.10 155 192 1.3E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS22225 44466b8c9d735283ffc08a0087848a7a 690 SMART SM00028 237 270 39.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS22225 44466b8c9d735283ffc08a0087848a7a 690 SMART SM00028 32 65 1.1 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS22225 44466b8c9d735283ffc08a0087848a7a 690 SMART SM00028 66 99 81.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS22225 44466b8c9d735283ffc08a0087848a7a 690 SMART SM00028 134 167 82.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS22225 44466b8c9d735283ffc08a0087848a7a 690 SMART SM00028 168 201 0.065 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS22225 44466b8c9d735283ffc08a0087848a7a 690 SMART SM00028 100 133 27.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS19405 86d642c5cd55075e73cdf8f67b48be31 384 SUPERFAMILY SSF51556 61 355 6.39E-95 T 28-03-2018 IPR032466 Metal-dependent hydrolase APY29_RS19405 86d642c5cd55075e73cdf8f67b48be31 384 SUPERFAMILY SSF51338 355 382 3.91E-13 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS19405 86d642c5cd55075e73cdf8f67b48be31 384 SUPERFAMILY SSF51338 8 60 3.91E-13 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS19405 86d642c5cd55075e73cdf8f67b48be31 384 Gene3D G3DSA:3.20.20.140 76 355 2.2E-91 T 28-03-2018 APY29_RS19405 86d642c5cd55075e73cdf8f67b48be31 384 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 7 381 7.3E-96 T 28-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 APY29_RS19405 86d642c5cd55075e73cdf8f67b48be31 384 Gene3D G3DSA:2.30.40.10 7 75 4.9E-9 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS19405 86d642c5cd55075e73cdf8f67b48be31 384 Pfam PF01979 Amidohydrolase family 57 382 5.9E-27 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 APY29_RS19405 86d642c5cd55075e73cdf8f67b48be31 384 PIRSF PIRSF038994 5 384 1.3E-111 T 28-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 APY29_RS07475 e617fe30e962e4cef32507f83f7f385b 420 Pfam PF01458 Uncharacterized protein family (UPF0051) 167 390 5.2E-64 T 28-03-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 APY29_RS07475 e617fe30e962e4cef32507f83f7f385b 420 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 131 400 9.1E-87 T 28-03-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 APY29_RS07475 e617fe30e962e4cef32507f83f7f385b 420 SUPERFAMILY SSF101960 16 401 6.28E-95 T 28-03-2018 APY29_RS18425 2bed25cd3bffa094318f3175822b2437 154 Pfam PF00072 Response regulator receiver domain 11 118 5.7E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS18425 2bed25cd3bffa094318f3175822b2437 154 Gene3D G3DSA:3.40.50.2300 4 146 8.8E-31 T 28-03-2018 APY29_RS18425 2bed25cd3bffa094318f3175822b2437 154 SUPERFAMILY SSF52172 9 142 2.42E-33 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS18425 2bed25cd3bffa094318f3175822b2437 154 SMART SM00448 9 124 3.6E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS15390 3e62e77c3f9094ba6ce2569bfdd65f6e 387 Gene3D G3DSA:2.40.110.10 131 222 8.3E-32 T 28-03-2018 APY29_RS15390 3e62e77c3f9094ba6ce2569bfdd65f6e 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 16 127 6.4E-32 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 APY29_RS15390 3e62e77c3f9094ba6ce2569bfdd65f6e 387 SUPERFAMILY SSF56645 5 232 2.88E-73 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APY29_RS15390 3e62e77c3f9094ba6ce2569bfdd65f6e 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 381 1.2E-29 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APY29_RS15390 3e62e77c3f9094ba6ce2569bfdd65f6e 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 132 222 6.8E-22 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 APY29_RS15390 3e62e77c3f9094ba6ce2569bfdd65f6e 387 SUPERFAMILY SSF47203 235 384 6.44E-39 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APY29_RS15390 3e62e77c3f9094ba6ce2569bfdd65f6e 387 Gene3D G3DSA:1.20.140.10 223 386 5.5E-36 T 28-03-2018 APY29_RS15390 3e62e77c3f9094ba6ce2569bfdd65f6e 387 Gene3D G3DSA:1.10.540.10 2 130 4.9E-37 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 APY29_RS15390 3e62e77c3f9094ba6ce2569bfdd65f6e 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 134 146 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APY29_RS21270 dd6a10d30d719a59c9eb87c5ce47f687 260 Pfam PF00561 alpha/beta hydrolase fold 22 132 2.1E-13 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS21270 dd6a10d30d719a59c9eb87c5ce47f687 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 204 218 2.9E-7 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS21270 dd6a10d30d719a59c9eb87c5ce47f687 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 2.9E-7 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS21270 dd6a10d30d719a59c9eb87c5ce47f687 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 2.9E-7 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS21270 dd6a10d30d719a59c9eb87c5ce47f687 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 2.9E-7 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS21270 dd6a10d30d719a59c9eb87c5ce47f687 260 Gene3D G3DSA:3.40.50.1820 3 260 2.6E-44 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS21270 dd6a10d30d719a59c9eb87c5ce47f687 260 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 10 258 1.5E-103 T 28-03-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 APY29_RS21270 dd6a10d30d719a59c9eb87c5ce47f687 260 SUPERFAMILY SSF53474 2 258 3.98E-59 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS12865 674f73a61bf4462c75c81cde8726ec97 458 Gene3D G3DSA:3.40.50.300 85 374 1.9E-81 T 28-03-2018 APY29_RS12865 674f73a61bf4462c75c81cde8726ec97 458 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 163 374 7.4E-72 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APY29_RS12865 674f73a61bf4462c75c81cde8726ec97 458 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 36 454 5.8E-167 T 28-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APY29_RS12865 674f73a61bf4462c75c81cde8726ec97 458 SUPERFAMILY SSF52540 111 379 2.42E-92 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS12865 674f73a61bf4462c75c81cde8726ec97 458 SMART SM00382 175 359 1.2E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS06100 be8972930cea607ccbcb1a8b6f0eb0c9 625 Gene3D G3DSA:2.40.170.20 167 622 7.6E-68 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS06100 be8972930cea607ccbcb1a8b6f0eb0c9 625 Gene3D G3DSA:2.170.130.10 24 160 2.6E-36 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS06100 be8972930cea607ccbcb1a8b6f0eb0c9 625 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 153 3.0E-29 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS06100 be8972930cea607ccbcb1a8b6f0eb0c9 625 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 1 623 3.0E-290 T 28-03-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 APY29_RS06100 be8972930cea607ccbcb1a8b6f0eb0c9 625 SUPERFAMILY SSF56935 34 621 1.34E-118 T 28-03-2018 APY29_RS06100 be8972930cea607ccbcb1a8b6f0eb0c9 625 Pfam PF00593 TonB dependent receptor 192 622 1.5E-55 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS20610 f324c8f2e9f9f155e742d06a93219e62 128 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 109 126 - T 28-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 APY29_RS20610 f324c8f2e9f9f155e742d06a93219e62 128 Gene3D G3DSA:2.60.300.12 23 128 7.3E-38 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 APY29_RS20610 f324c8f2e9f9f155e742d06a93219e62 128 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 7 128 35.585 T 28-03-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 APY29_RS20610 f324c8f2e9f9f155e742d06a93219e62 128 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 25 128 1.4E-37 T 28-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 APY29_RS20610 f324c8f2e9f9f155e742d06a93219e62 128 Pfam PF01521 Iron-sulphur cluster biosynthesis 23 123 4.5E-19 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 APY29_RS20610 f324c8f2e9f9f155e742d06a93219e62 128 SUPERFAMILY SSF89360 23 117 1.9E-29 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 APY29_RS19705 03d4598b834ca7313674be3c4c6edeb1 348 Pfam PF06723 MreB/Mbl protein 11 339 9.6E-152 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 APY29_RS19705 03d4598b834ca7313674be3c4c6edeb1 348 SUPERFAMILY SSF53067 155 340 2.34E-48 T 28-03-2018 APY29_RS19705 03d4598b834ca7313674be3c4c6edeb1 348 SMART SM00268 10 345 0.0028 T 28-03-2018 IPR004000 Actin family APY29_RS19705 03d4598b834ca7313674be3c4c6edeb1 348 Gene3D G3DSA:3.90.640.10 200 257 1.5E-28 T 28-03-2018 APY29_RS19705 03d4598b834ca7313674be3c4c6edeb1 348 Gene3D G3DSA:3.30.420.40 258 322 1.8E-8 T 28-03-2018 APY29_RS19705 03d4598b834ca7313674be3c4c6edeb1 348 SUPERFAMILY SSF53067 9 153 3.82E-38 T 28-03-2018 APY29_RS19705 03d4598b834ca7313674be3c4c6edeb1 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 5.6E-62 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 APY29_RS19705 03d4598b834ca7313674be3c4c6edeb1 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 5.6E-62 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 APY29_RS19705 03d4598b834ca7313674be3c4c6edeb1 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 5.6E-62 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 APY29_RS19705 03d4598b834ca7313674be3c4c6edeb1 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 5.6E-62 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 APY29_RS19705 03d4598b834ca7313674be3c4c6edeb1 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 5.6E-62 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 APY29_RS19705 03d4598b834ca7313674be3c4c6edeb1 348 Gene3D G3DSA:3.30.420.40 165 199 7.3E-4 T 28-03-2018 APY29_RS19705 03d4598b834ca7313674be3c4c6edeb1 348 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 2.9E-161 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 APY29_RS19705 03d4598b834ca7313674be3c4c6edeb1 348 Gene3D G3DSA:3.30.420.40 8 164 8.8E-44 T 28-03-2018 APY29_RS12795 a8b4789c1ff0052a30587fbb59ba60ae 254 SUPERFAMILY SSF51735 8 248 2.4E-60 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS12795 a8b4789c1ff0052a30587fbb59ba60ae 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.1E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS12795 a8b4789c1ff0052a30587fbb59ba60ae 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.1E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS12795 a8b4789c1ff0052a30587fbb59ba60ae 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 2.1E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS12795 a8b4789c1ff0052a30587fbb59ba60ae 254 Gene3D G3DSA:3.40.50.720 53 253 3.5E-46 T 28-03-2018 APY29_RS12795 a8b4789c1ff0052a30587fbb59ba60ae 254 Gene3D G3DSA:3.40.50.720 5 52 5.4E-11 T 28-03-2018 APY29_RS12795 a8b4789c1ff0052a30587fbb59ba60ae 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 247 3.8E-44 T 28-03-2018 APY29_RS12795 a8b4789c1ff0052a30587fbb59ba60ae 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 7.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS12795 a8b4789c1ff0052a30587fbb59ba60ae 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 7.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS12795 a8b4789c1ff0052a30587fbb59ba60ae 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 7.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS12795 a8b4789c1ff0052a30587fbb59ba60ae 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 7.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS12795 a8b4789c1ff0052a30587fbb59ba60ae 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 7.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS12795 a8b4789c1ff0052a30587fbb59ba60ae 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 7.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS12795 a8b4789c1ff0052a30587fbb59ba60ae 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APY29_RS14015 20aea960c890e6271410850367fe1935 327 Pfam PF01715 IPP transferase 43 292 1.7E-81 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 APY29_RS14015 20aea960c890e6271410850367fe1935 327 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 10 302 5.5E-90 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 APY29_RS14015 20aea960c890e6271410850367fe1935 327 SUPERFAMILY SSF52540 10 154 9.58E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS14015 20aea960c890e6271410850367fe1935 327 Gene3D G3DSA:3.40.50.300 5 186 1.5E-60 T 28-03-2018 APY29_RS14015 20aea960c890e6271410850367fe1935 327 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 9 312 29.041 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 APY29_RS14015 20aea960c890e6271410850367fe1935 327 Gene3D G3DSA:1.10.287.890 204 291 1.1E-22 T 28-03-2018 APY29_RS18535 52ef77f128db1bbb3880be6a644ccefa 298 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 271 1.4E-80 T 28-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 APY29_RS18535 52ef77f128db1bbb3880be6a644ccefa 298 SUPERFAMILY SSF53213 2 285 1.27E-90 T 28-03-2018 APY29_RS18535 52ef77f128db1bbb3880be6a644ccefa 298 Gene3D G3DSA:3.40.830.10 1 297 2.6E-49 T 28-03-2018 APY29_RS12075 9ef3de662a2babf42ebbab943b0dfd2d 203 Gene3D G3DSA:1.10.10.10 116 202 1.4E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS12075 9ef3de662a2babf42ebbab943b0dfd2d 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 1.2E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS12075 9ef3de662a2babf42ebbab943b0dfd2d 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 1.2E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS12075 9ef3de662a2babf42ebbab943b0dfd2d 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 1.2E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS12075 9ef3de662a2babf42ebbab943b0dfd2d 203 SUPERFAMILY SSF46894 132 203 2.18E-17 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS12075 9ef3de662a2babf42ebbab943b0dfd2d 203 SUPERFAMILY SSF52172 8 155 2.85E-31 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS12075 9ef3de662a2babf42ebbab943b0dfd2d 203 Gene3D G3DSA:3.40.50.2300 2 115 4.1E-26 T 28-03-2018 APY29_RS12075 9ef3de662a2babf42ebbab943b0dfd2d 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 198 8.5E-17 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS12075 9ef3de662a2babf42ebbab943b0dfd2d 203 Pfam PF00072 Response regulator receiver domain 8 118 9.0E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS12075 9ef3de662a2babf42ebbab943b0dfd2d 203 SMART SM00448 6 117 3.8E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS12075 9ef3de662a2babf42ebbab943b0dfd2d 203 SMART SM00421 141 198 3.4E-17 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS13585 7d64af66ba4a7ef9f8795a45eb557963 417 Gene3D G3DSA:3.90.550.10 31 311 5.9E-65 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS13585 7d64af66ba4a7ef9f8795a45eb557963 417 Pfam PF13641 Glycosyltransferase like family 2 53 277 2.2E-36 T 28-03-2018 APY29_RS13585 7d64af66ba4a7ef9f8795a45eb557963 417 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 10 415 8.4E-187 T 28-03-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0042710 APY29_RS13585 7d64af66ba4a7ef9f8795a45eb557963 417 SUPERFAMILY SSF53448 42 326 4.57E-67 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS06540 8b05e3c9defcabf09541419526fa5644 694 SUPERFAMILY SSF53756 347 690 1.94E-23 T 28-03-2018 APY29_RS06540 8b05e3c9defcabf09541419526fa5644 694 Gene3D G3DSA:3.90.550.10 25 332 4.1E-52 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS06540 8b05e3c9defcabf09541419526fa5644 694 Gene3D G3DSA:3.40.50.2000 506 679 5.1E-21 T 28-03-2018 APY29_RS06540 8b05e3c9defcabf09541419526fa5644 694 SUPERFAMILY SSF53448 62 292 6.14E-52 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS06540 8b05e3c9defcabf09541419526fa5644 694 Pfam PF13692 Glycosyl transferases group 1 521 659 1.1E-25 T 28-03-2018 APY29_RS06540 8b05e3c9defcabf09541419526fa5644 694 Pfam PF00535 Glycosyl transferase family 2 75 199 7.0E-27 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 APY29_RS14215 b9243ff665564f4bf033cd85b4c61016 280 SUPERFAMILY SSF53335 22 280 5.93E-35 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS14215 b9243ff665564f4bf033cd85b4c61016 280 Gene3D G3DSA:3.40.50.150 17 228 1.5E-31 T 28-03-2018 APY29_RS14215 b9243ff665564f4bf033cd85b4c61016 280 Pfam PF13649 Methyltransferase domain 65 159 1.0E-16 T 28-03-2018 APY29_RS15730 16199925fc3fa2e31d8923bf3ff7a821 1196 SUPERFAMILY SSF89550 6 249 1.84E-9 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 APY29_RS15730 16199925fc3fa2e31d8923bf3ff7a821 1196 Pfam PF02811 PHP domain 8 183 7.1E-25 T 28-03-2018 IPR004013 PHP domain GO:0003824 APY29_RS15730 16199925fc3fa2e31d8923bf3ff7a821 1196 Pfam PF14579 Helix-hairpin-helix motif 823 912 1.6E-26 T 28-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS15730 16199925fc3fa2e31d8923bf3ff7a821 1196 Pfam PF01336 OB-fold nucleic acid binding domain 1030 1098 3.4E-8 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APY29_RS15730 16199925fc3fa2e31d8923bf3ff7a821 1196 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 994 0.0 T 28-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS15730 16199925fc3fa2e31d8923bf3ff7a821 1196 Gene3D G3DSA:1.10.150.280 807 909 8.8E-10 T 28-03-2018 APY29_RS15730 16199925fc3fa2e31d8923bf3ff7a821 1196 SUPERFAMILY SSF160975 838 887 4.58E-5 T 28-03-2018 APY29_RS15730 16199925fc3fa2e31d8923bf3ff7a821 1196 SUPERFAMILY SSF50249 1028 1098 4.57E-5 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS15730 16199925fc3fa2e31d8923bf3ff7a821 1196 Gene3D G3DSA:2.40.50.140 963 1121 1.6E-8 T 28-03-2018 APY29_RS15730 16199925fc3fa2e31d8923bf3ff7a821 1196 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 304 748 2.1E-166 T 28-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS15730 16199925fc3fa2e31d8923bf3ff7a821 1196 SMART SM00481 7 88 3.3E-16 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal APY29_RS15730 16199925fc3fa2e31d8923bf3ff7a821 1196 Gene3D G3DSA:3.20.20.140 5 268 2.2E-32 T 28-03-2018 APY29_RS06575 e6cff9abb7298aa5d3f516c9d67af243 316 Gene3D G3DSA:3.40.50.20 3 130 1.5E-43 T 28-03-2018 APY29_RS06575 e6cff9abb7298aa5d3f516c9d67af243 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 312 4.2E-137 T 28-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 APY29_RS06575 e6cff9abb7298aa5d3f516c9d67af243 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 3.8E-72 T 28-03-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 APY29_RS06575 e6cff9abb7298aa5d3f516c9d67af243 316 SUPERFAMILY SSF56059 124 311 9.03E-54 T 28-03-2018 APY29_RS06575 e6cff9abb7298aa5d3f516c9d67af243 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 121 1.6E-39 T 28-03-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 APY29_RS06575 e6cff9abb7298aa5d3f516c9d67af243 316 Gene3D G3DSA:3.30.470.20 193 301 7.1E-14 T 28-03-2018 APY29_RS06575 e6cff9abb7298aa5d3f516c9d67af243 316 SUPERFAMILY SSF52440 3 123 1.12E-38 T 28-03-2018 IPR016185 Pre-ATP-grasp domain APY29_RS06575 e6cff9abb7298aa5d3f516c9d67af243 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 155.998 T 28-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 APY29_RS06575 e6cff9abb7298aa5d3f516c9d67af243 316 Gene3D G3DSA:3.30.1490.20 139 192 1.4E-18 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APY29_RS20790 75657178bf9533506e16a8491780c67e 300 Gene3D G3DSA:3.40.50.720 89 295 1.6E-18 T 28-03-2018 APY29_RS20790 75657178bf9533506e16a8491780c67e 300 SUPERFAMILY SSF51735 16 286 1.86E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS20790 75657178bf9533506e16a8491780c67e 300 Gene3D G3DSA:3.40.50.720 9 88 2.0E-12 T 28-03-2018 APY29_RS20790 75657178bf9533506e16a8491780c67e 300 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 73 3.1E-5 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 APY29_RS20790 75657178bf9533506e16a8491780c67e 300 Pfam PF01370 NAD dependent epimerase/dehydratase family 127 211 2.6E-5 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 APY29_RS13250 c8b8a6b62825976565bfde5367e667f8 560 Pfam PF00501 AMP-binding enzyme 34 465 1.2E-115 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APY29_RS13250 c8b8a6b62825976565bfde5367e667f8 560 Gene3D G3DSA:3.40.50.980 22 218 7.8E-42 T 28-03-2018 APY29_RS13250 c8b8a6b62825976565bfde5367e667f8 560 ProSitePatterns PS00455 Putative AMP-binding domain signature. 213 224 - T 28-03-2018 IPR020845 AMP-binding, conserved site APY29_RS13250 c8b8a6b62825976565bfde5367e667f8 560 Gene3D G3DSA:3.40.50.980 219 375 1.8E-42 T 28-03-2018 APY29_RS13250 c8b8a6b62825976565bfde5367e667f8 560 SUPERFAMILY SSF56801 23 556 2.88E-154 T 28-03-2018 APY29_RS13250 c8b8a6b62825976565bfde5367e667f8 560 Gene3D G3DSA:3.30.300.30 459 558 1.6E-26 T 28-03-2018 APY29_RS13250 c8b8a6b62825976565bfde5367e667f8 560 Gene3D G3DSA:2.30.38.10 376 458 7.5E-30 T 28-03-2018 APY29_RS13250 c8b8a6b62825976565bfde5367e667f8 560 Pfam PF13193 AMP-binding enzyme C-terminal domain 474 548 3.5E-18 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain APY29_RS20525 a13e28861dd81feff3e5d391688fd704 586 Gene3D G3DSA:3.40.50.1820 3 291 2.5E-35 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS20525 a13e28861dd81feff3e5d391688fd704 586 Gene3D G3DSA:3.40.50.150 354 582 1.3E-17 T 28-03-2018 APY29_RS20525 a13e28861dd81feff3e5d391688fd704 586 Pfam PF12147 Putative methyltransferase 275 583 2.4E-153 T 28-03-2018 IPR022744 Methyltransferase domain, putative APY29_RS20525 a13e28861dd81feff3e5d391688fd704 586 Pfam PF12146 Serine aminopeptidase, S33 35 267 7.2E-67 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 APY29_RS20525 a13e28861dd81feff3e5d391688fd704 586 SUPERFAMILY SSF53474 210 280 8.32E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS20525 a13e28861dd81feff3e5d391688fd704 586 SUPERFAMILY SSF53474 6 143 8.32E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS20525 a13e28861dd81feff3e5d391688fd704 586 SUPERFAMILY SSF53335 381 568 2.79E-19 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS18485 3921100f34b4e02a1e085936dd109f58 369 SUPERFAMILY SSF55347 168 322 3.27E-21 T 28-03-2018 APY29_RS18485 3921100f34b4e02a1e085936dd109f58 369 Gene3D G3DSA:3.30.360.10 183 368 9.3E-31 T 28-03-2018 APY29_RS18485 3921100f34b4e02a1e085936dd109f58 369 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 38 162 2.5E-24 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 APY29_RS18485 3921100f34b4e02a1e085936dd109f58 369 Gene3D G3DSA:3.40.50.720 28 182 7.0E-37 T 28-03-2018 APY29_RS18485 3921100f34b4e02a1e085936dd109f58 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 287 302 4.3E-20 T 28-03-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 APY29_RS18485 3921100f34b4e02a1e085936dd109f58 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 152 166 4.3E-20 T 28-03-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 APY29_RS18485 3921100f34b4e02a1e085936dd109f58 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 335 351 4.3E-20 T 28-03-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 APY29_RS18485 3921100f34b4e02a1e085936dd109f58 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 90 106 4.3E-20 T 28-03-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 APY29_RS18485 3921100f34b4e02a1e085936dd109f58 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 36 49 4.3E-20 T 28-03-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 APY29_RS18485 3921100f34b4e02a1e085936dd109f58 369 SUPERFAMILY SSF51735 29 191 3.1E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS23175 62d66f9e2e0614397d2de86ac0ee356c 264 SUPERFAMILY SSF52540 7 235 1.05E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23175 62d66f9e2e0614397d2de86ac0ee356c 264 Pfam PF00005 ABC transporter 24 171 7.3E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS23175 62d66f9e2e0614397d2de86ac0ee356c 264 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS23175 62d66f9e2e0614397d2de86ac0ee356c 264 Gene3D G3DSA:3.40.50.300 5 252 3.3E-59 T 28-03-2018 APY29_RS23175 62d66f9e2e0614397d2de86ac0ee356c 264 SMART SM00382 33 223 3.4E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS02800 75b25bdac1ca1b334445304e675ebcb7 268 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 50 174 1.5E-28 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 APY29_RS02800 75b25bdac1ca1b334445304e675ebcb7 268 SUPERFAMILY SSF55846 36 189 1.03E-47 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 APY29_RS02800 75b25bdac1ca1b334445304e675ebcb7 268 SMART SM00644 38 173 1.6E-26 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 APY29_RS02800 75b25bdac1ca1b334445304e675ebcb7 268 Gene3D G3DSA:3.40.80.10 35 188 8.7E-42 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 APY29_RS16460 015316a7466b1924fdfd426a7d5b45c8 337 SUPERFAMILY SSF81606 158 334 5.49E-8 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 APY29_RS16460 015316a7466b1924fdfd426a7d5b45c8 337 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 171 295 8.6E-7 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 APY29_RS16460 015316a7466b1924fdfd426a7d5b45c8 337 SUPERFAMILY SSF55874 37 112 6.02E-6 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16460 015316a7466b1924fdfd426a7d5b45c8 337 Gene3D G3DSA:3.30.565.10 9 142 3.0E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16460 015316a7466b1924fdfd426a7d5b45c8 337 Pfam PF13581 Histidine kinase-like ATPase domain 19 131 1.3E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16460 015316a7466b1924fdfd426a7d5b45c8 337 Gene3D G3DSA:3.60.40.10 144 334 1.6E-10 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 APY29_RS17835 243b78a5ffddc932729421e4c369c067 365 Pfam PF13505 Outer membrane protein beta-barrel domain 8 188 6.2E-20 T 28-03-2018 IPR027385 Outer membrane protein beta-barrel APY29_RS17835 243b78a5ffddc932729421e4c369c067 365 Pfam PF00691 OmpA family 255 346 7.1E-23 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS17835 243b78a5ffddc932729421e4c369c067 365 Gene3D G3DSA:3.30.1330.60 206 365 4.2E-40 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS17835 243b78a5ffddc932729421e4c369c067 365 Gene3D G3DSA:2.40.160.20 8 205 9.1E-27 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APY29_RS17835 243b78a5ffddc932729421e4c369c067 365 PRINTS PR01021 OMPA domain signature 301 317 4.8E-18 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APY29_RS17835 243b78a5ffddc932729421e4c369c067 365 PRINTS PR01021 OMPA domain signature 286 301 4.8E-18 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APY29_RS17835 243b78a5ffddc932729421e4c369c067 365 PRINTS PR01021 OMPA domain signature 256 278 4.8E-18 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APY29_RS17835 243b78a5ffddc932729421e4c369c067 365 SUPERFAMILY SSF103088 253 363 1.18E-35 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS17835 243b78a5ffddc932729421e4c369c067 365 SUPERFAMILY SSF56925 27 188 2.62E-17 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APY29_RS17835 243b78a5ffddc932729421e4c369c067 365 SUPERFAMILY SSF103647 210 246 4.18E-5 T 28-03-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 APY29_RS20280 33bf58b07b4bb2cbfbe2efde3c35cf96 423 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 39 140 2.7E-7 T 28-03-2018 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 APY29_RS20280 33bf58b07b4bb2cbfbe2efde3c35cf96 423 SUPERFAMILY SSF53254 38 393 6.24E-37 T 28-03-2018 IPR029033 Histidine phosphatase superfamily APY29_RS20280 33bf58b07b4bb2cbfbe2efde3c35cf96 423 Gene3D G3DSA:3.40.50.1240 25 412 2.3E-33 T 28-03-2018 IPR029033 Histidine phosphatase superfamily APY29_RS21565 0638351b8069c1ff2c225fa82a8b4b52 293 Gene3D G3DSA:3.40.50.1220 4 278 8.6E-67 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain APY29_RS21565 0638351b8069c1ff2c225fa82a8b4b52 293 Pfam PF02146 Sir2 family 27 229 1.0E-45 T 28-03-2018 IPR003000 Sirtuin family GO:0070403 APY29_RS21565 0638351b8069c1ff2c225fa82a8b4b52 293 SUPERFAMILY SSF52467 8 273 3.27E-80 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain APY29_RS21565 0638351b8069c1ff2c225fa82a8b4b52 293 Hamap MF_01967 NAD-dependent protein deacetylase [cobB]. 3 273 64.031 T 28-03-2018 IPR026587 Sirtuin, class II Reactome: R-HSA-2151201 APY29_RS19840 76d50e85d08677f96a6c60829f501e34 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 237 250 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 APY29_RS19840 76d50e85d08677f96a6c60829f501e34 394 Gene3D G3DSA:3.90.1150.10 24 105 9.3E-7 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS19840 76d50e85d08677f96a6c60829f501e34 394 Gene3D G3DSA:3.40.640.10 106 276 5.2E-40 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS19840 76d50e85d08677f96a6c60829f501e34 394 Gene3D G3DSA:3.90.1150.10 277 394 4.4E-26 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS19840 76d50e85d08677f96a6c60829f501e34 394 SUPERFAMILY SSF53383 12 393 1.26E-95 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS19840 76d50e85d08677f96a6c60829f501e34 394 Pfam PF00155 Aminotransferase class I and II 39 387 1.7E-53 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APY29_RS18995 baff3fe4de40feebbb0fb2ebaa7e4b61 315 Gene3D G3DSA:3.90.79.10 3 132 1.2E-30 T 28-03-2018 APY29_RS18995 baff3fe4de40feebbb0fb2ebaa7e4b61 315 PRINTS PR00502 NUDIX hydrolase family signature 37 51 2.5E-8 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 APY29_RS18995 baff3fe4de40feebbb0fb2ebaa7e4b61 315 PRINTS PR00502 NUDIX hydrolase family signature 51 66 2.5E-8 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 APY29_RS18995 baff3fe4de40feebbb0fb2ebaa7e4b61 315 TIGRFAM TIGR00586 mutt: mutator mutT protein 7 132 4.1E-33 T 28-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 APY29_RS18995 baff3fe4de40feebbb0fb2ebaa7e4b61 315 SUPERFAMILY SSF51391 118 313 2.49E-50 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 APY29_RS18995 baff3fe4de40feebbb0fb2ebaa7e4b61 315 Pfam PF02581 Thiamine monophosphate synthase 136 312 1.4E-41 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 APY29_RS18995 baff3fe4de40feebbb0fb2ebaa7e4b61 315 Gene3D G3DSA:3.20.20.70 133 315 1.2E-30 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS18995 baff3fe4de40feebbb0fb2ebaa7e4b61 315 Pfam PF00293 NUDIX domain 11 124 5.6E-19 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 APY29_RS18995 baff3fe4de40feebbb0fb2ebaa7e4b61 315 SUPERFAMILY SSF55811 6 131 1.76E-34 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 APY29_RS18995 baff3fe4de40feebbb0fb2ebaa7e4b61 315 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APY29_RS18390 872e13536a2a1caaa849a66867268b61 146 SUPERFAMILY SSF54534 56 131 8.63E-19 T 28-03-2018 APY29_RS18390 872e13536a2a1caaa849a66867268b61 146 PIRSF PIRSF006092 35 135 1.2E-26 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 APY29_RS18390 872e13536a2a1caaa849a66867268b61 146 Gene3D G3DSA:3.10.50.30 52 145 9.1E-26 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APY29_RS18390 872e13536a2a1caaa849a66867268b61 146 Pfam PF14760 Rnk N-terminus 11 50 2.0E-12 T 28-03-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain APY29_RS18390 872e13536a2a1caaa849a66867268b61 146 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 57 132 1.2E-21 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APY29_RS18390 872e13536a2a1caaa849a66867268b61 146 Gene3D G3DSA:1.10.286.20 10 50 1.6E-13 T 28-03-2018 APY29_RS05905 d4d179ba077b899001a7131a123c8e18 419 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 179 207 - T 28-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 APY29_RS05905 d4d179ba077b899001a7131a123c8e18 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 399 418 3.1E-17 T 28-03-2018 IPR003004 GspF/PilC family APY29_RS05905 d4d179ba077b899001a7131a123c8e18 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 80 92 3.1E-17 T 28-03-2018 IPR003004 GspF/PilC family APY29_RS05905 d4d179ba077b899001a7131a123c8e18 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 179 207 3.1E-17 T 28-03-2018 IPR003004 GspF/PilC family APY29_RS05905 d4d179ba077b899001a7131a123c8e18 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 383 397 3.1E-17 T 28-03-2018 IPR003004 GspF/PilC family APY29_RS05905 d4d179ba077b899001a7131a123c8e18 419 Pfam PF00482 Type II secretion system (T2SS), protein F 84 207 1.8E-31 T 28-03-2018 IPR018076 Type II secretion system F domain APY29_RS05905 d4d179ba077b899001a7131a123c8e18 419 Pfam PF00482 Type II secretion system (T2SS), protein F 288 410 1.3E-29 T 28-03-2018 IPR018076 Type II secretion system F domain APY29_RS04510 7a5f0f326c8d15f7ae7296b17fbd4f59 761 PRINTS PR00811 Bacterial general secretion pathway protein D signature 557 581 2.4E-14 T 28-03-2018 IPR001775 GspD/PilQ family APY29_RS04510 7a5f0f326c8d15f7ae7296b17fbd4f59 761 PRINTS PR00811 Bacterial general secretion pathway protein D signature 701 719 2.4E-14 T 28-03-2018 IPR001775 GspD/PilQ family APY29_RS04510 7a5f0f326c8d15f7ae7296b17fbd4f59 761 PRINTS PR00811 Bacterial general secretion pathway protein D signature 724 738 2.4E-14 T 28-03-2018 IPR001775 GspD/PilQ family APY29_RS04510 7a5f0f326c8d15f7ae7296b17fbd4f59 761 PRINTS PR00811 Bacterial general secretion pathway protein D signature 483 493 2.4E-14 T 28-03-2018 IPR001775 GspD/PilQ family APY29_RS04510 7a5f0f326c8d15f7ae7296b17fbd4f59 761 Pfam PF00263 Bacterial type II and III secretion system protein 561 737 1.3E-43 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 APY29_RS04510 7a5f0f326c8d15f7ae7296b17fbd4f59 761 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 98 746 8.3E-191 T 28-03-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 APY29_RS04510 7a5f0f326c8d15f7ae7296b17fbd4f59 761 Pfam PF03958 Bacterial type II/III secretion system short domain 333 483 6.1E-12 T 28-03-2018 IPR005644 NolW-like APY29_RS04510 7a5f0f326c8d15f7ae7296b17fbd4f59 761 Pfam PF03958 Bacterial type II/III secretion system short domain 259 326 2.5E-7 T 28-03-2018 IPR005644 NolW-like APY29_RS04510 7a5f0f326c8d15f7ae7296b17fbd4f59 761 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 682 715 - T 28-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 APY29_RS19885 0bb20fa250fc19e29aaa16601b85644b 245 Gene3D G3DSA:3.40.50.2300 5 140 4.3E-36 T 28-03-2018 APY29_RS19885 0bb20fa250fc19e29aaa16601b85644b 245 Gene3D G3DSA:2.40.50.40 141 204 2.8E-11 T 28-03-2018 APY29_RS19885 0bb20fa250fc19e29aaa16601b85644b 245 SMART SM00448 6 117 4.9E-33 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS19885 0bb20fa250fc19e29aaa16601b85644b 245 Pfam PF04397 LytTr DNA-binding domain 148 242 8.5E-24 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 APY29_RS19885 0bb20fa250fc19e29aaa16601b85644b 245 Pfam PF00072 Response regulator receiver domain 8 117 2.7E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS19885 0bb20fa250fc19e29aaa16601b85644b 245 SUPERFAMILY SSF52172 5 122 4.27E-36 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS19885 0bb20fa250fc19e29aaa16601b85644b 245 SMART SM00850 146 243 2.8E-25 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 APY29_RS22265 71b631510173863a17d8d7186743c7f8 210 PIRSF PIRSF009320 1 206 1.1E-29 T 28-03-2018 APY29_RS22265 71b631510173863a17d8d7186743c7f8 210 SUPERFAMILY SSF52540 1 208 6.08E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS22265 71b631510173863a17d8d7186743c7f8 210 Gene3D G3DSA:3.40.50.300 1 203 3.2E-34 T 28-03-2018 APY29_RS22265 71b631510173863a17d8d7186743c7f8 210 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 158 2.5E-17 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain APY29_RS07895 09f32a20f7240a9239a0e0e8332e98ca 467 Gene3D G3DSA:3.40.50.620 128 231 1.7E-26 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS07895 09f32a20f7240a9239a0e0e8332e98ca 467 Gene3D G3DSA:1.10.10.350 368 467 7.4E-19 T 28-03-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 APY29_RS07895 09f32a20f7240a9239a0e0e8332e98ca 467 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 305 7.4E-102 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 APY29_RS07895 09f32a20f7240a9239a0e0e8332e98ca 467 SUPERFAMILY SSF52374 4 295 2.41E-106 T 28-03-2018 APY29_RS07895 09f32a20f7240a9239a0e0e8332e98ca 467 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS07895 09f32a20f7240a9239a0e0e8332e98ca 467 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 462 5.0E-169 T 28-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 APY29_RS07895 09f32a20f7240a9239a0e0e8332e98ca 467 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 30.743 T 28-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 APY29_RS07895 09f32a20f7240a9239a0e0e8332e98ca 467 Gene3D G3DSA:3.40.50.620 1 127 1.2E-40 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS07895 09f32a20f7240a9239a0e0e8332e98ca 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 4.1E-24 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 APY29_RS07895 09f32a20f7240a9239a0e0e8332e98ca 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 4.1E-24 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 APY29_RS07895 09f32a20f7240a9239a0e0e8332e98ca 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 4.1E-24 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 APY29_RS07895 09f32a20f7240a9239a0e0e8332e98ca 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 4.1E-24 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 APY29_RS07895 09f32a20f7240a9239a0e0e8332e98ca 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 4.1E-24 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 APY29_RS07895 09f32a20f7240a9239a0e0e8332e98ca 467 SUPERFAMILY SSF48163 299 461 8.76E-36 T 28-03-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 APY29_RS07895 09f32a20f7240a9239a0e0e8332e98ca 467 Gene3D G3DSA:1.10.8.70 318 361 8.7E-8 T 28-03-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APY29_RS07895 09f32a20f7240a9239a0e0e8332e98ca 467 Gene3D G3DSA:1.10.1160.10 232 315 5.6E-29 T 28-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APY29_RS16720 40ed9d952d394087a6e3f2200cdda6a5 988 Gene3D G3DSA:1.10.8.280 289 407 3.3E-36 T 28-03-2018 APY29_RS16720 40ed9d952d394087a6e3f2200cdda6a5 988 ProSitePatterns PS00211 ABC transporters family signature. 831 845 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS16720 40ed9d952d394087a6e3f2200cdda6a5 988 Gene3D G3DSA:3.40.50.300 37 139 1.8E-4 T 28-03-2018 APY29_RS16720 40ed9d952d394087a6e3f2200cdda6a5 988 SUPERFAMILY SSF52540 616 915 6.36E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS16720 40ed9d952d394087a6e3f2200cdda6a5 988 Gene3D G3DSA:3.40.50.300 428 613 3.1E-22 T 28-03-2018 APY29_RS16720 40ed9d952d394087a6e3f2200cdda6a5 988 SUPERFAMILY SSF52540 3 206 9.15E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS16720 40ed9d952d394087a6e3f2200cdda6a5 988 SUPERFAMILY SSF52540 432 571 9.15E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS16720 40ed9d952d394087a6e3f2200cdda6a5 988 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 941 22.536 T 28-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 APY29_RS16720 40ed9d952d394087a6e3f2200cdda6a5 988 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS16720 40ed9d952d394087a6e3f2200cdda6a5 988 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 926 0.0 T 28-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 APY29_RS16720 40ed9d952d394087a6e3f2200cdda6a5 988 Pfam PF00005 ABC transporter 625 861 3.8E-10 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS16720 40ed9d952d394087a6e3f2200cdda6a5 988 Gene3D G3DSA:3.40.50.300 8 36 8.5E-4 T 28-03-2018 APY29_RS16720 40ed9d952d394087a6e3f2200cdda6a5 988 Gene3D G3DSA:3.40.50.300 614 953 1.6E-55 T 28-03-2018 APY29_RS16720 40ed9d952d394087a6e3f2200cdda6a5 988 Gene3D G3DSA:3.30.190.20 140 250 5.4E-41 T 28-03-2018 APY29_RS19925 6a672b6641bef0e8ca8d9575f3a3200f 476 Pfam PF01740 STAS domain 382 466 1.8E-7 T 28-03-2018 IPR002645 STAS domain APY29_RS19925 6a672b6641bef0e8ca8d9575f3a3200f 476 Gene3D G3DSA:3.30.750.24 376 467 9.1E-16 T 28-03-2018 IPR002645 STAS domain APY29_RS19925 6a672b6641bef0e8ca8d9575f3a3200f 476 Pfam PF00916 Sulfate permease family 1 126 3.3E-19 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 APY29_RS19925 6a672b6641bef0e8ca8d9575f3a3200f 476 Pfam PF00916 Sulfate permease family 127 340 1.5E-26 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 APY29_RS19925 6a672b6641bef0e8ca8d9575f3a3200f 476 SUPERFAMILY SSF52091 382 466 3.14E-13 T 28-03-2018 IPR002645 STAS domain APY29_RS12735 97c95b271245930fd90b39acd7d87a2c 399 Pfam PF00700 Bacterial flagellin C-terminal helical region 313 398 7.1E-29 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APY29_RS12735 97c95b271245930fd90b39acd7d87a2c 399 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 7.8E-46 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APY29_RS12735 97c95b271245930fd90b39acd7d87a2c 399 Gene3D G3DSA:1.20.1330.10 44 205 1.3E-49 T 28-03-2018 APY29_RS12735 97c95b271245930fd90b39acd7d87a2c 399 Gene3D G3DSA:1.20.1330.10 206 371 8.9E-27 T 28-03-2018 APY29_RS12735 97c95b271245930fd90b39acd7d87a2c 399 Pfam PF07196 Flagellin hook IN motif 198 259 1.1E-6 T 28-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 APY29_RS12735 97c95b271245930fd90b39acd7d87a2c 399 PRINTS PR00207 Flagellin signature 37 54 1.2E-27 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 APY29_RS12735 97c95b271245930fd90b39acd7d87a2c 399 PRINTS PR00207 Flagellin signature 111 134 1.2E-27 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 APY29_RS12735 97c95b271245930fd90b39acd7d87a2c 399 PRINTS PR00207 Flagellin signature 76 95 1.2E-27 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 APY29_RS12735 97c95b271245930fd90b39acd7d87a2c 399 SUPERFAMILY SSF64518 1 399 7.72E-103 T 28-03-2018 APY29_RS15215 e9257ef6fbd31c841533358f57c64f8f 141 Gene3D G3DSA:1.10.10.10 7 94 7.0E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS15215 e9257ef6fbd31c841533358f57c64f8f 141 SUPERFAMILY SSF46785 11 136 6.13E-38 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS15215 e9257ef6fbd31c841533358f57c64f8f 141 Pfam PF01475 Ferric uptake regulator family 14 134 2.3E-42 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 APY29_RS04980 6aa3d1f988ee7700b5ef3325e0030118 520 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 11 501 2.9E-195 T 28-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 APY29_RS04980 6aa3d1f988ee7700b5ef3325e0030118 520 Pfam PF00682 HMGL-like 11 279 3.2E-91 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 APY29_RS04980 6aa3d1f988ee7700b5ef3325e0030118 520 SUPERFAMILY SSF51569 8 298 4.76E-95 T 28-03-2018 APY29_RS04980 6aa3d1f988ee7700b5ef3325e0030118 520 SUPERFAMILY SSF110921 417 503 4.32E-21 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 APY29_RS04980 6aa3d1f988ee7700b5ef3325e0030118 520 SMART SM00917 376 504 3.0E-29 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 APY29_RS04980 6aa3d1f988ee7700b5ef3325e0030118 520 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 9 513 40.224 T 28-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 APY29_RS04980 6aa3d1f988ee7700b5ef3325e0030118 520 Gene3D G3DSA:3.20.20.70 2 338 8.3E-105 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS04980 6aa3d1f988ee7700b5ef3325e0030118 520 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 19 35 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 APY29_RS04980 6aa3d1f988ee7700b5ef3325e0030118 520 Pfam PF08502 LeuA allosteric (dimerisation) domain 377 504 4.0E-30 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 APY29_RS04980 6aa3d1f988ee7700b5ef3325e0030118 520 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 206 219 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 APY29_RS05995 b27e1df4def55d75b3375edccdf65698 622 SUPERFAMILY SSF58104 321 605 3.66E-72 T 28-03-2018 APY29_RS05995 b27e1df4def55d75b3375edccdf65698 622 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 481 510 8.8E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS05995 b27e1df4def55d75b3375edccdf65698 622 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 529 558 8.8E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS05995 b27e1df4def55d75b3375edccdf65698 622 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 404 8.8E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS05995 b27e1df4def55d75b3375edccdf65698 622 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 452 479 8.8E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS05995 b27e1df4def55d75b3375edccdf65698 622 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 420 569 6.3E-54 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS05995 b27e1df4def55d75b3375edccdf65698 622 Gene3D G3DSA:1.10.287.950 205 410 1.5E-18 T 28-03-2018 APY29_RS05995 b27e1df4def55d75b3375edccdf65698 622 Gene3D G3DSA:1.10.287.950 411 605 2.2E-47 T 28-03-2018 APY29_RS05995 b27e1df4def55d75b3375edccdf65698 622 SMART SM00283 354 601 1.3E-90 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS04860 353cc1e8e7c9b5795dbb02f1f8a2427c 356 SUPERFAMILY SSF51430 10 325 9.17E-92 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS04860 353cc1e8e7c9b5795dbb02f1f8a2427c 356 Pfam PF00248 Aldo/keto reductase family 22 325 5.1E-70 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS04860 353cc1e8e7c9b5795dbb02f1f8a2427c 356 Gene3D G3DSA:3.20.20.100 10 328 6.1E-89 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS20950 01a0fac0f1e3995fdfb674e021436b8a 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 248 5.6E-54 T 28-03-2018 APY29_RS20950 01a0fac0f1e3995fdfb674e021436b8a 252 Gene3D G3DSA:3.40.50.720 45 252 3.4E-55 T 28-03-2018 APY29_RS20950 01a0fac0f1e3995fdfb674e021436b8a 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APY29_RS20950 01a0fac0f1e3995fdfb674e021436b8a 252 SUPERFAMILY SSF51735 9 250 4.06E-71 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS20950 01a0fac0f1e3995fdfb674e021436b8a 252 Gene3D G3DSA:3.40.50.10090 1 44 1.1E-8 T 28-03-2018 APY29_RS20950 01a0fac0f1e3995fdfb674e021436b8a 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20950 01a0fac0f1e3995fdfb674e021436b8a 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20950 01a0fac0f1e3995fdfb674e021436b8a 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20950 01a0fac0f1e3995fdfb674e021436b8a 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20950 01a0fac0f1e3995fdfb674e021436b8a 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20950 01a0fac0f1e3995fdfb674e021436b8a 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20950 01a0fac0f1e3995fdfb674e021436b8a 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 7.2E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20950 01a0fac0f1e3995fdfb674e021436b8a 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 7.2E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20950 01a0fac0f1e3995fdfb674e021436b8a 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 7.2E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS16320 975863bde54a48fd4692e6f97c421c37 218 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 81 4.0E-14 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APY29_RS16320 975863bde54a48fd4692e6f97c421c37 218 SUPERFAMILY SSF47616 83 195 1.22E-16 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like APY29_RS16320 975863bde54a48fd4692e6f97c421c37 218 SUPERFAMILY SSF52833 5 85 2.56E-22 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS16320 975863bde54a48fd4692e6f97c421c37 218 Gene3D G3DSA:1.20.1050.10 100 211 7.7E-13 T 28-03-2018 APY29_RS16320 975863bde54a48fd4692e6f97c421c37 218 Gene3D G3DSA:3.40.30.10 1 99 8.7E-25 T 28-03-2018 APY29_RS16320 975863bde54a48fd4692e6f97c421c37 218 Pfam PF00043 Glutathione S-transferase, C-terminal domain 131 188 3.1E-5 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal APY29_RS11075 2b92db7d59ee31067fd078f39bb01c60 335 Hamap MF_00524 Glucokinase [glk]. 7 326 33.585 T 28-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 APY29_RS11075 2b92db7d59ee31067fd078f39bb01c60 335 TIGRFAM TIGR00749 glk: glucokinase 9 320 1.3E-80 T 28-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 APY29_RS11075 2b92db7d59ee31067fd078f39bb01c60 335 Pfam PF02685 Glucokinase 9 324 5.9E-112 T 28-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 APY29_RS11075 2b92db7d59ee31067fd078f39bb01c60 335 Gene3D G3DSA:3.30.420.40 2 114 3.6E-13 T 28-03-2018 APY29_RS11075 2b92db7d59ee31067fd078f39bb01c60 335 SUPERFAMILY SSF53067 8 326 4.07E-60 T 28-03-2018 APY29_RS11075 2b92db7d59ee31067fd078f39bb01c60 335 Gene3D G3DSA:3.30.420.40 115 331 2.2E-30 T 28-03-2018 APY29_RS05920 d42b54c58ba8038f6eaf050dfc05b2f5 578 SUPERFAMILY SSF52540 190 576 7.63E-97 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS05920 d42b54c58ba8038f6eaf050dfc05b2f5 578 Pfam PF00437 Type II/IV secretion system protein 202 468 4.1E-88 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APY29_RS05920 d42b54c58ba8038f6eaf050dfc05b2f5 578 Gene3D G3DSA:3.40.50.300 302 578 3.3E-59 T 28-03-2018 APY29_RS05920 d42b54c58ba8038f6eaf050dfc05b2f5 578 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 396 410 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APY29_RS05920 d42b54c58ba8038f6eaf050dfc05b2f5 578 SUPERFAMILY SSF160246 11 148 2.01E-33 T 28-03-2018 APY29_RS05920 d42b54c58ba8038f6eaf050dfc05b2f5 578 Gene3D G3DSA:3.30.450.90 169 301 2.5E-45 T 28-03-2018 APY29_RS05920 d42b54c58ba8038f6eaf050dfc05b2f5 578 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 49 151 2.5E-19 T 28-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 APY29_RS05920 d42b54c58ba8038f6eaf050dfc05b2f5 578 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 15 578 1.9E-267 T 28-03-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 APY29_RS09585 626deba1e3f984da715fc22902087089 622 Pfam PF13721 SecD export protein N-terminal TM region 10 110 4.9E-32 T 28-03-2018 IPR027398 SecD export protein N-terminal TM domain APY29_RS09585 626deba1e3f984da715fc22902087089 622 SUPERFAMILY SSF82866 417 614 3.01E-38 T 28-03-2018 APY29_RS09585 626deba1e3f984da715fc22902087089 622 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 130 606 8.4E-123 T 28-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 APY29_RS09585 626deba1e3f984da715fc22902087089 622 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 10 621 45.899 T 28-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 APY29_RS09585 626deba1e3f984da715fc22902087089 622 Pfam PF02355 Protein export membrane protein 442 610 8.1E-21 T 28-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial APY29_RS09585 626deba1e3f984da715fc22902087089 622 Gene3D G3DSA:1.20.1640.10 404 612 2.7E-31 T 28-03-2018 APY29_RS09585 626deba1e3f984da715fc22902087089 622 Pfam PF07549 SecD/SecF GG Motif 123 148 5.5E-6 T 28-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site APY29_RS09585 626deba1e3f984da715fc22902087089 622 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 352 600 3.4E-63 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APY29_RS08850 81316f8b60fcae6b44344a5ba5868d09 350 PIRSF PIRSF028415 1 350 1.8E-219 T 28-03-2018 IPR014545 Uncharacterised conserved protein UCP028415 APY29_RS08850 81316f8b60fcae6b44344a5ba5868d09 350 Pfam PF10030 Uncharacterized protein conserved in bacteria (DUF2272) 78 300 1.0E-102 T 28-03-2018 IPR019262 Domain of unknown function DUF2272 APY29_RS04790 b15e35a8df369f006ee71d0d8a685079 644 Gene3D G3DSA:2.60.40.1180 563 637 6.9E-13 T 28-03-2018 APY29_RS04790 b15e35a8df369f006ee71d0d8a685079 644 Pfam PF00128 Alpha amylase, catalytic domain 103 310 7.7E-32 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS04790 b15e35a8df369f006ee71d0d8a685079 644 SUPERFAMILY SSF51445 19 557 6.63E-95 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS04790 b15e35a8df369f006ee71d0d8a685079 644 SUPERFAMILY SSF51011 563 636 4.5E-10 T 28-03-2018 APY29_RS04790 b15e35a8df369f006ee71d0d8a685079 644 SMART SM00642 95 530 1.9E-26 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS04790 b15e35a8df369f006ee71d0d8a685079 644 Gene3D G3DSA:1.10.1740.10 11 88 8.1E-13 T 28-03-2018 APY29_RS04790 b15e35a8df369f006ee71d0d8a685079 644 Gene3D G3DSA:3.20.20.80 92 560 1.3E-70 T 28-03-2018 APY29_RS18645 bc1ceb5e2d2015a2fbe593e50c81c74c 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 442 8.6E-78 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain APY29_RS18645 bc1ceb5e2d2015a2fbe593e50c81c74c 544 Gene3D G3DSA:3.10.105.10 300 513 8.9E-42 T 28-03-2018 APY29_RS18645 bc1ceb5e2d2015a2fbe593e50c81c74c 544 SUPERFAMILY SSF53850 32 542 1.36E-114 T 28-03-2018 APY29_RS18645 bc1ceb5e2d2015a2fbe593e50c81c74c 544 Gene3D G3DSA:3.90.76.10 60 156 5.4E-29 T 28-03-2018 APY29_RS18645 bc1ceb5e2d2015a2fbe593e50c81c74c 544 PIRSF PIRSF002741 1 544 2.4E-90 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APY29_RS18645 bc1ceb5e2d2015a2fbe593e50c81c74c 544 Gene3D G3DSA:3.40.190.10 157 299 2.1E-32 T 28-03-2018 APY29_RS12855 a0404b18f66736544b42c1d9201e8830 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 268 294 9.1E-66 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APY29_RS12855 a0404b18f66736544b42c1d9201e8830 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 1 17 9.1E-66 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APY29_RS12855 a0404b18f66736544b42c1d9201e8830 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 191 216 9.1E-66 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APY29_RS12855 a0404b18f66736544b42c1d9201e8830 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 110 133 9.1E-66 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APY29_RS12855 a0404b18f66736544b42c1d9201e8830 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 244 264 9.1E-66 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APY29_RS12855 a0404b18f66736544b42c1d9201e8830 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 222 242 9.1E-66 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APY29_RS12855 a0404b18f66736544b42c1d9201e8830 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 30 56 9.1E-66 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APY29_RS12855 a0404b18f66736544b42c1d9201e8830 329 PIRSF PIRSF003161 1 329 2.4E-119 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APY29_RS12855 a0404b18f66736544b42c1d9201e8830 329 SUPERFAMILY SSF48029 110 321 1.44E-67 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical APY29_RS12855 a0404b18f66736544b42c1d9201e8830 329 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 1 323 7.5E-103 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APY29_RS12855 a0404b18f66736544b42c1d9201e8830 329 Gene3D G3DSA:1.10.220.30 2 65 9.1E-13 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical APY29_RS12855 a0404b18f66736544b42c1d9201e8830 329 Pfam PF01706 FliG C-terminal domain 215 320 3.6E-39 T 28-03-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal APY29_RS12855 a0404b18f66736544b42c1d9201e8830 329 Pfam PF14842 FliG N-terminal domain 1 101 4.7E-33 T 28-03-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain APY29_RS12855 a0404b18f66736544b42c1d9201e8830 329 Gene3D G3DSA:1.10.220.30 191 329 8.8E-31 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical APY29_RS12855 a0404b18f66736544b42c1d9201e8830 329 Gene3D G3DSA:1.10.220.30 69 186 2.6E-21 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical APY29_RS12855 a0404b18f66736544b42c1d9201e8830 329 SUPERFAMILY SSF48029 2 113 3.92E-25 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical APY29_RS12855 a0404b18f66736544b42c1d9201e8830 329 Pfam PF14841 FliG middle domain 111 184 2.3E-26 T 28-03-2018 IPR032779 Flagellar motor switch protein FliG, middle domain APY29_RS10205 c32cead2502406fa9fd1705f049cf518 449 Gene3D G3DSA:2.30.40.10 3 83 9.0E-12 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS10205 c32cead2502406fa9fd1705f049cf518 449 SUPERFAMILY SSF51556 72 371 8.08E-96 T 28-03-2018 IPR032466 Metal-dependent hydrolase APY29_RS10205 c32cead2502406fa9fd1705f049cf518 449 Pfam PF01979 Amidohydrolase family 70 417 7.7E-66 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 APY29_RS10205 c32cead2502406fa9fd1705f049cf518 449 SUPERFAMILY SSF51338 14 72 2.06E-24 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS10205 c32cead2502406fa9fd1705f049cf518 449 SUPERFAMILY SSF51338 370 444 2.06E-24 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS10205 c32cead2502406fa9fd1705f049cf518 449 Gene3D G3DSA:3.20.20.140 84 370 1.2E-57 T 28-03-2018 APY29_RS05345 acfeebdaefdad14e1376537e592e1768 221 Pfam PF04350 Pilus assembly protein, PilO 51 201 5.2E-50 T 28-03-2018 IPR007445 Pilus assembly protein, PilO APY29_RS05345 acfeebdaefdad14e1376537e592e1768 221 Gene3D G3DSA:1.10.287.540 60 95 8.4E-12 T 28-03-2018 APY29_RS05345 acfeebdaefdad14e1376537e592e1768 221 PIRSF PIRSF016482 1 218 2.3E-87 T 28-03-2018 IPR007445 Pilus assembly protein, PilO APY29_RS05345 acfeebdaefdad14e1376537e592e1768 221 Gene3D G3DSA:3.30.70.60 96 211 2.7E-26 T 28-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 APY29_RS12235 e5f401ca453f33926f2c0858288139c0 90 Pfam PF05717 IS66 Orf2 like protein 6 65 7.8E-16 T 28-03-2018 IPR008878 Transposase IS66, Orf2 APY29_RS12410 e5f401ca453f33926f2c0858288139c0 90 Pfam PF05717 IS66 Orf2 like protein 6 65 7.8E-16 T 28-03-2018 IPR008878 Transposase IS66, Orf2 APY29_RS02160 1826ec8f7fdc039808de50099715f105 307 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 28-03-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 APY29_RS02160 1826ec8f7fdc039808de50099715f105 307 Gene3D G3DSA:3.40.800.10 1 303 2.5E-84 T 28-03-2018 APY29_RS02160 1826ec8f7fdc039808de50099715f105 307 Pfam PF00491 Arginase family 8 299 2.2E-76 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 APY29_RS02160 1826ec8f7fdc039808de50099715f105 307 PRINTS PR00116 Arginase signature 97 112 4.4E-45 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 APY29_RS02160 1826ec8f7fdc039808de50099715f105 307 PRINTS PR00116 Arginase signature 261 275 4.4E-45 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 APY29_RS02160 1826ec8f7fdc039808de50099715f105 307 PRINTS PR00116 Arginase signature 226 255 4.4E-45 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 APY29_RS02160 1826ec8f7fdc039808de50099715f105 307 PRINTS PR00116 Arginase signature 124 151 4.4E-45 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 APY29_RS02160 1826ec8f7fdc039808de50099715f105 307 PRINTS PR00116 Arginase signature 178 196 4.4E-45 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 APY29_RS02160 1826ec8f7fdc039808de50099715f105 307 PIRSF PIRSF036979 2 303 7.8E-34 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 APY29_RS02160 1826ec8f7fdc039808de50099715f105 307 SUPERFAMILY SSF52768 8 302 4.14E-90 T 28-03-2018 APY29_RS02160 1826ec8f7fdc039808de50099715f105 307 TIGRFAM TIGR01229 rocF_arginase: arginase 9 303 3.1E-88 T 28-03-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 APY29_RS18625 b8c7ef92f85af8c9de6921b46e5c4b6a 314 Gene3D G3DSA:3.60.21.10 1 282 1.1E-41 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like APY29_RS18625 b8c7ef92f85af8c9de6921b46e5c4b6a 314 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 45.05 T 28-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 APY29_RS18625 b8c7ef92f85af8c9de6921b46e5c4b6a 314 Pfam PF00149 Calcineurin-like phosphoesterase 1 86 1.4E-12 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 APY29_RS18625 b8c7ef92f85af8c9de6921b46e5c4b6a 314 PRINTS PR00114 Serine/threonine phosphatase family signature 176 192 5.4E-5 T 28-03-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 APY29_RS18625 b8c7ef92f85af8c9de6921b46e5c4b6a 314 PRINTS PR00114 Serine/threonine phosphatase family signature 2 29 5.4E-5 T 28-03-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 APY29_RS18625 b8c7ef92f85af8c9de6921b46e5c4b6a 314 PRINTS PR00114 Serine/threonine phosphatase family signature 32 59 5.4E-5 T 28-03-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 APY29_RS18625 b8c7ef92f85af8c9de6921b46e5c4b6a 314 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 259 5.9E-78 T 28-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 APY29_RS18625 b8c7ef92f85af8c9de6921b46e5c4b6a 314 SUPERFAMILY SSF56300 1 273 3.24E-48 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like APY29_RS18625 b8c7ef92f85af8c9de6921b46e5c4b6a 314 PIRSF PIRSF000903 1 275 1.6E-119 T 28-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 APY29_RS19685 00b8c0f13b5d2b05d654c855b162bdf4 372 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 1.1E-116 T 28-03-2018 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 APY29_RS19685 00b8c0f13b5d2b05d654c855b162bdf4 372 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 325 349 - T 28-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 APY29_RS19685 00b8c0f13b5d2b05d654c855b162bdf4 372 Pfam PF01098 Cell cycle protein 21 367 1.2E-95 T 28-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 APY29_RS04995 4cf5a8c8cc2728320157111eaffd820f 573 Gene3D G3DSA:3.40.50.1220 199 343 1.6E-48 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain APY29_RS04995 4cf5a8c8cc2728320157111eaffd820f 573 SUPERFAMILY SSF52518 10 190 1.22E-61 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold APY29_RS04995 4cf5a8c8cc2728320157111eaffd820f 573 SUPERFAMILY SSF52467 195 353 1.56E-53 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain APY29_RS04995 4cf5a8c8cc2728320157111eaffd820f 573 Gene3D G3DSA:3.40.50.970 344 550 6.5E-47 T 28-03-2018 APY29_RS04995 4cf5a8c8cc2728320157111eaffd820f 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 332 8.7E-43 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APY29_RS04995 4cf5a8c8cc2728320157111eaffd820f 573 SUPERFAMILY SSF52518 368 559 1.04E-65 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold APY29_RS04995 4cf5a8c8cc2728320157111eaffd820f 573 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 11 558 1.9E-205 T 28-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 APY29_RS04995 4cf5a8c8cc2728320157111eaffd820f 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 174 4.7E-58 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APY29_RS04995 4cf5a8c8cc2728320157111eaffd820f 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 423 442 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 APY29_RS04995 4cf5a8c8cc2728320157111eaffd820f 573 Gene3D G3DSA:3.40.50.970 3 198 3.4E-62 T 28-03-2018 APY29_RS04995 4cf5a8c8cc2728320157111eaffd820f 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 386 534 8.8E-48 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APY29_RS15440 41c039c869134a18e781c71ac588dd89 373 SUPERFAMILY SSF56931 112 331 1.96E-63 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 APY29_RS15440 41c039c869134a18e781c71ac588dd89 373 PRINTS PR01486 Bacterial phospholipase A1 protein signature 253 271 7.8E-21 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 APY29_RS15440 41c039c869134a18e781c71ac588dd89 373 PRINTS PR01486 Bacterial phospholipase A1 protein signature 163 180 7.8E-21 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 APY29_RS15440 41c039c869134a18e781c71ac588dd89 373 PRINTS PR01486 Bacterial phospholipase A1 protein signature 208 227 7.8E-21 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 APY29_RS15440 41c039c869134a18e781c71ac588dd89 373 PRINTS PR01486 Bacterial phospholipase A1 protein signature 185 201 7.8E-21 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 APY29_RS15440 41c039c869134a18e781c71ac588dd89 373 PRINTS PR01486 Bacterial phospholipase A1 protein signature 288 306 7.8E-21 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 APY29_RS15440 41c039c869134a18e781c71ac588dd89 373 PRINTS PR01486 Bacterial phospholipase A1 protein signature 238 252 7.8E-21 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 APY29_RS15440 41c039c869134a18e781c71ac588dd89 373 Pfam PF02253 Phospholipase A1 111 307 5.2E-74 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 APY29_RS15440 41c039c869134a18e781c71ac588dd89 373 Gene3D G3DSA:2.40.230.10 109 335 7.6E-65 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 APY29_RS14005 4131a56039b6873d04c00e2ebdd971aa 439 PIRSF PIRSF006809 3 424 2.9E-142 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 APY29_RS14005 4131a56039b6873d04c00e2ebdd971aa 439 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 364 1.9E-145 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 APY29_RS14005 4131a56039b6873d04c00e2ebdd971aa 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 2.7E-12 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS14005 4131a56039b6873d04c00e2ebdd971aa 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 222 240 2.7E-12 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS14005 4131a56039b6873d04c00e2ebdd971aa 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 2.7E-12 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS14005 4131a56039b6873d04c00e2ebdd971aa 439 Pfam PF13167 GTP-binding GTPase N-terminal 26 112 2.3E-30 T 28-03-2018 IPR025121 GTPase HflX, N-terminal APY29_RS14005 4131a56039b6873d04c00e2ebdd971aa 439 Gene3D G3DSA:3.40.50.300 166 231 1.0E-14 T 28-03-2018 APY29_RS14005 4131a56039b6873d04c00e2ebdd971aa 439 Gene3D G3DSA:3.40.50.300 232 358 4.6E-15 T 28-03-2018 APY29_RS14005 4131a56039b6873d04c00e2ebdd971aa 439 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 199 358 2.3E-12 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 APY29_RS14005 4131a56039b6873d04c00e2ebdd971aa 439 SUPERFAMILY SSF52540 199 365 9.35E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS14005 4131a56039b6873d04c00e2ebdd971aa 439 Hamap MF_00900 GTPase HflX [hflX]. 27 394 46.742 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 APY29_RS14005 4131a56039b6873d04c00e2ebdd971aa 439 Pfam PF01926 50S ribosome-binding GTPase 200 318 1.6E-21 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS14005 4131a56039b6873d04c00e2ebdd971aa 439 Gene3D G3DSA:3.40.50.720 5 146 0.22 T 28-03-2018 APY29_RS14005 4131a56039b6873d04c00e2ebdd971aa 439 Pfam PF16360 GTP-binding GTPase Middle Region 114 193 8.9E-27 T 28-03-2018 IPR032305 GTP-binding protein, middle domain APY29_RS15810 a71199b95b2f210e51a1bbe979f2a1e7 129 Gene3D G3DSA:3.10.180.10 1 129 1.4E-28 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS15810 a71199b95b2f210e51a1bbe979f2a1e7 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 1.4E-21 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APY29_RS15810 a71199b95b2f210e51a1bbe979f2a1e7 129 SUPERFAMILY SSF54593 1 127 5.91E-33 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS15900 de6e461a28f346648f0b7b7e73d197dc 115 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 28-03-2018 IPR019897 RidA, conserved site APY29_RS15900 de6e461a28f346648f0b7b7e73d197dc 115 Gene3D G3DSA:3.30.1330.40 1 115 1.4E-25 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APY29_RS15900 de6e461a28f346648f0b7b7e73d197dc 115 Pfam PF01042 Endoribonuclease L-PSP 10 113 2.1E-23 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family APY29_RS15900 de6e461a28f346648f0b7b7e73d197dc 115 SUPERFAMILY SSF55298 3 114 5.81E-29 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APY29_RS22590 010aaff7421a4b2987eb1802256447e6 445 SUPERFAMILY SSF51658 11 443 1.82E-161 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain APY29_RS22590 010aaff7421a4b2987eb1802256447e6 445 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 12 443 2.4E-212 T 28-03-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS22590 010aaff7421a4b2987eb1802256447e6 445 Hamap MF_00455 Xylose isomerase [xylA]. 19 443 53.504 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS22590 010aaff7421a4b2987eb1802256447e6 445 Gene3D G3DSA:3.20.20.150 10 445 7.6E-105 T 28-03-2018 APY29_RS22590 010aaff7421a4b2987eb1802256447e6 445 PRINTS PR00688 Xylose isomerase signature 188 209 2.5E-79 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS22590 010aaff7421a4b2987eb1802256447e6 445 PRINTS PR00688 Xylose isomerase signature 141 161 2.5E-79 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS22590 010aaff7421a4b2987eb1802256447e6 445 PRINTS PR00688 Xylose isomerase signature 341 352 2.5E-79 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS22590 010aaff7421a4b2987eb1802256447e6 445 PRINTS PR00688 Xylose isomerase signature 100 122 2.5E-79 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS22590 010aaff7421a4b2987eb1802256447e6 445 PRINTS PR00688 Xylose isomerase signature 164 183 2.5E-79 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS22590 010aaff7421a4b2987eb1802256447e6 445 PRINTS PR00688 Xylose isomerase signature 237 261 2.5E-79 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS22590 010aaff7421a4b2987eb1802256447e6 445 PRINTS PR00688 Xylose isomerase signature 215 234 2.5E-79 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS22590 010aaff7421a4b2987eb1802256447e6 445 PRINTS PR00688 Xylose isomerase signature 279 306 2.5E-79 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS22590 010aaff7421a4b2987eb1802256447e6 445 PRINTS PR00688 Xylose isomerase signature 308 319 2.5E-79 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS13795 010aaff7421a4b2987eb1802256447e6 445 SUPERFAMILY SSF51658 11 443 1.82E-161 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain APY29_RS13795 010aaff7421a4b2987eb1802256447e6 445 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 12 443 2.4E-212 T 28-03-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS13795 010aaff7421a4b2987eb1802256447e6 445 Hamap MF_00455 Xylose isomerase [xylA]. 19 443 53.504 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS13795 010aaff7421a4b2987eb1802256447e6 445 Gene3D G3DSA:3.20.20.150 10 445 7.6E-105 T 28-03-2018 APY29_RS13795 010aaff7421a4b2987eb1802256447e6 445 PRINTS PR00688 Xylose isomerase signature 188 209 2.5E-79 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS13795 010aaff7421a4b2987eb1802256447e6 445 PRINTS PR00688 Xylose isomerase signature 141 161 2.5E-79 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS13795 010aaff7421a4b2987eb1802256447e6 445 PRINTS PR00688 Xylose isomerase signature 341 352 2.5E-79 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS13795 010aaff7421a4b2987eb1802256447e6 445 PRINTS PR00688 Xylose isomerase signature 100 122 2.5E-79 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS13795 010aaff7421a4b2987eb1802256447e6 445 PRINTS PR00688 Xylose isomerase signature 164 183 2.5E-79 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS13795 010aaff7421a4b2987eb1802256447e6 445 PRINTS PR00688 Xylose isomerase signature 237 261 2.5E-79 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS13795 010aaff7421a4b2987eb1802256447e6 445 PRINTS PR00688 Xylose isomerase signature 215 234 2.5E-79 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS13795 010aaff7421a4b2987eb1802256447e6 445 PRINTS PR00688 Xylose isomerase signature 279 306 2.5E-79 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS13795 010aaff7421a4b2987eb1802256447e6 445 PRINTS PR00688 Xylose isomerase signature 308 319 2.5E-79 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APY29_RS13470 b1e737c7719f14899f1af7be68540a0d 206 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 115 201 17.854 T 28-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 APY29_RS13470 b1e737c7719f14899f1af7be68540a0d 206 SUPERFAMILY SSF101386 117 205 5.45E-21 T 28-03-2018 APY29_RS13470 b1e737c7719f14899f1af7be68540a0d 206 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 206 35.152 T 28-03-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 APY29_RS13470 b1e737c7719f14899f1af7be68540a0d 206 SUPERFAMILY SSF141734 14 113 3.01E-42 T 28-03-2018 APY29_RS13470 b1e737c7719f14899f1af7be68540a0d 206 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 122 199 4.0E-11 T 28-03-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 APY29_RS13470 b1e737c7719f14899f1af7be68540a0d 206 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 1.0E-23 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 APY29_RS13470 b1e737c7719f14899f1af7be68540a0d 206 Gene3D G3DSA:1.10.287.1080 114 206 1.7E-17 T 28-03-2018 APY29_RS13470 b1e737c7719f14899f1af7be68540a0d 206 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 6.9E-31 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 APY29_RS13470 b1e737c7719f14899f1af7be68540a0d 206 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 119 198 6.6E-26 T 28-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 APY29_RS00565 a3f04bed76a404cfc7fc9d88c52d6be1 402 Pfam PF07055 Enoyl reductase FAD binding domain 327 390 1.3E-30 T 28-03-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 APY29_RS00565 a3f04bed76a404cfc7fc9d88c52d6be1 402 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 79 1.5E-34 T 28-03-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 APY29_RS00565 a3f04bed76a404cfc7fc9d88c52d6be1 402 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 318 4.7E-109 T 28-03-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 APY29_RS00565 a3f04bed76a404cfc7fc9d88c52d6be1 402 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 396 56.15 T 28-03-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 APY29_RS00565 a3f04bed76a404cfc7fc9d88c52d6be1 402 Gene3D G3DSA:3.40.50.720 22 298 0.0013 T 28-03-2018 APY29_RS11745 ead847fa7eb5f649074f011d24e71e43 253 SUPERFAMILY SSF56024 94 237 1.33E-20 T 28-03-2018 APY29_RS11745 ead847fa7eb5f649074f011d24e71e43 253 SMART SM00155 190 217 1.5E-4 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 APY29_RS11745 ead847fa7eb5f649074f011d24e71e43 253 Gene3D G3DSA:3.30.870.10 1 245 8.3E-31 T 28-03-2018 APY29_RS11745 ead847fa7eb5f649074f011d24e71e43 253 Pfam PF13091 PLD-like domain 110 239 1.1E-15 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 APY29_RS19465 1810e1c6d0c62f88e309bf2e9b9e56b0 329 Pfam PF03934 Type II secretion system (T2SS), protein K 36 317 2.0E-79 T 28-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 APY29_RS19465 1810e1c6d0c62f88e309bf2e9b9e56b0 329 Gene3D G3DSA:1.10.40.60 105 217 1.1E-28 T 28-03-2018 APY29_RS19465 1810e1c6d0c62f88e309bf2e9b9e56b0 329 SUPERFAMILY SSF54523 287 325 4.39E-16 T 28-03-2018 APY29_RS19465 1810e1c6d0c62f88e309bf2e9b9e56b0 329 SUPERFAMILY SSF54523 40 105 4.39E-16 T 28-03-2018 APY29_RS19465 1810e1c6d0c62f88e309bf2e9b9e56b0 329 SUPERFAMILY SSF158544 106 216 2.88E-28 T 28-03-2018 APY29_RS19465 1810e1c6d0c62f88e309bf2e9b9e56b0 329 SUPERFAMILY SSF158544 220 286 2.56E-15 T 28-03-2018 APY29_RS19465 1810e1c6d0c62f88e309bf2e9b9e56b0 329 PIRSF PIRSF002786 4 329 3.6E-69 T 28-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 APY29_RS19465 1810e1c6d0c62f88e309bf2e9b9e56b0 329 Gene3D G3DSA:1.10.40.60 221 284 1.7E-17 T 28-03-2018 APY29_RS22740 741ac7f2417109a6c78542d1ed898ec1 494 SUPERFAMILY SSF103473 66 485 9.02E-85 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS22740 741ac7f2417109a6c78542d1ed898ec1 494 Gene3D G3DSA:1.20.1250.20 68 270 2.8E-41 T 28-03-2018 APY29_RS22740 741ac7f2417109a6c78542d1ed898ec1 494 Pfam PF07690 Major Facilitator Superfamily 85 441 5.8E-56 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS22740 741ac7f2417109a6c78542d1ed898ec1 494 Gene3D G3DSA:1.20.1250.20 279 488 4.7E-24 T 28-03-2018 APY29_RS00070 f86c03e89a7dfe9442b27e6f4ce31846 486 Gene3D G3DSA:3.30.870.10 313 477 2.6E-29 T 28-03-2018 APY29_RS00070 f86c03e89a7dfe9442b27e6f4ce31846 486 Pfam PF13091 PLD-like domain 328 448 2.5E-25 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 APY29_RS00070 f86c03e89a7dfe9442b27e6f4ce31846 486 Pfam PF13091 PLD-like domain 134 247 1.6E-16 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 APY29_RS00070 f86c03e89a7dfe9442b27e6f4ce31846 486 PIRSF PIRSF000850 370 462 0.068 T 28-03-2018 APY29_RS00070 f86c03e89a7dfe9442b27e6f4ce31846 486 PIRSF PIRSF000850 101 204 0.2 T 28-03-2018 APY29_RS00070 f86c03e89a7dfe9442b27e6f4ce31846 486 PIRSF PIRSF000850 283 384 10.0 T 28-03-2018 APY29_RS00070 f86c03e89a7dfe9442b27e6f4ce31846 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 19 486 1.3E-117 T 28-03-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 APY29_RS00070 f86c03e89a7dfe9442b27e6f4ce31846 486 Gene3D G3DSA:3.30.870.10 94 284 4.0E-36 T 28-03-2018 APY29_RS00070 f86c03e89a7dfe9442b27e6f4ce31846 486 SUPERFAMILY SSF56024 270 463 1.26E-43 T 28-03-2018 APY29_RS00070 f86c03e89a7dfe9442b27e6f4ce31846 486 SMART SM00155 219 246 0.028 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 APY29_RS00070 f86c03e89a7dfe9442b27e6f4ce31846 486 SMART SM00155 400 427 2.2E-4 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 APY29_RS00070 f86c03e89a7dfe9442b27e6f4ce31846 486 SUPERFAMILY SSF56024 74 317 2.51E-47 T 28-03-2018 APY29_RS22705 d93ceaa6810f43ba52b63986d37b510f 345 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 62 328 5.2E-51 T 28-03-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region APY29_RS22705 d93ceaa6810f43ba52b63986d37b510f 345 Gene3D G3DSA:2.120.10.30 21 337 9.7E-41 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS22705 d93ceaa6810f43ba52b63986d37b510f 345 SUPERFAMILY SSF63829 34 337 2.83E-60 T 28-03-2018 APY29_RS22705 d93ceaa6810f43ba52b63986d37b510f 345 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 63 80 2.2E-6 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) APY29_RS22705 d93ceaa6810f43ba52b63986d37b510f 345 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 272 289 2.2E-6 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) APY29_RS22705 d93ceaa6810f43ba52b63986d37b510f 345 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 203 225 2.2E-6 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) APY29_RS08705 821bbbe988c21af9da8418565a2a8799 788 Pfam PF00672 HAMP domain 294 341 1.3E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS08705 821bbbe988c21af9da8418565a2a8799 788 SUPERFAMILY SSF158472 294 342 1.26E-7 T 28-03-2018 APY29_RS08705 821bbbe988c21af9da8418565a2a8799 788 Pfam PF14827 Double sensory domain of two-component sensor kinase 51 241 3.6E-11 T 28-03-2018 IPR029150 Double Cache domain 3 APY29_RS08705 821bbbe988c21af9da8418565a2a8799 788 SMART SM00304 294 346 5.8E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS08705 821bbbe988c21af9da8418565a2a8799 788 SUPERFAMILY SSF141868 528 775 4.32E-85 T 28-03-2018 IPR001633 EAL domain APY29_RS08705 821bbbe988c21af9da8418565a2a8799 788 Gene3D G3DSA:3.30.70.270 342 505 2.7E-45 T 28-03-2018 APY29_RS08705 821bbbe988c21af9da8418565a2a8799 788 Pfam PF00563 EAL domain 529 762 4.9E-69 T 28-03-2018 IPR001633 EAL domain APY29_RS08705 821bbbe988c21af9da8418565a2a8799 788 Gene3D G3DSA:3.20.20.450 511 779 5.1E-94 T 28-03-2018 IPR001633 EAL domain APY29_RS08705 821bbbe988c21af9da8418565a2a8799 788 SMART SM00267 341 512 1.1E-40 T 28-03-2018 IPR000160 GGDEF domain APY29_RS08705 821bbbe988c21af9da8418565a2a8799 788 SMART SM00052 522 767 4.9E-102 T 28-03-2018 IPR001633 EAL domain APY29_RS08705 821bbbe988c21af9da8418565a2a8799 788 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 350 500 2.4E-30 T 28-03-2018 IPR000160 GGDEF domain APY29_RS08705 821bbbe988c21af9da8418565a2a8799 788 SUPERFAMILY SSF55073 357 500 4.16E-36 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS08705 821bbbe988c21af9da8418565a2a8799 788 Pfam PF00990 Diguanylate cyclase, GGDEF domain 352 501 1.3E-36 T 28-03-2018 IPR000160 GGDEF domain APY29_RS13195 4a0a3815c89daa69bd312a62302fcbe6 795 SUPERFAMILY SSF55785 261 387 2.09E-6 T 28-03-2018 IPR000014 PAS domain APY29_RS13195 4a0a3815c89daa69bd312a62302fcbe6 795 SMART SM00304 439 491 13.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13195 4a0a3815c89daa69bd312a62302fcbe6 795 SMART SM00304 215 267 2.0E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13195 4a0a3815c89daa69bd312a62302fcbe6 795 Pfam PF12729 Four helix bundle sensory module for signal transduction 8 185 1.2E-14 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain APY29_RS13195 4a0a3815c89daa69bd312a62302fcbe6 795 Gene3D G3DSA:1.20.120.30 27 189 5.6E-11 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain APY29_RS13195 4a0a3815c89daa69bd312a62302fcbe6 795 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 552 706 8.1E-54 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS13195 4a0a3815c89daa69bd312a62302fcbe6 795 SMART SM00283 492 739 1.5E-92 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS13195 4a0a3815c89daa69bd312a62302fcbe6 795 SUPERFAMILY SSF58104 459 740 7.98E-72 T 28-03-2018 APY29_RS13195 4a0a3815c89daa69bd312a62302fcbe6 795 SUPERFAMILY SSF158472 215 266 1.31E-8 T 28-03-2018 APY29_RS13195 4a0a3815c89daa69bd312a62302fcbe6 795 Gene3D G3DSA:3.30.450.20 257 411 5.2E-12 T 28-03-2018 APY29_RS13195 4a0a3815c89daa69bd312a62302fcbe6 795 Gene3D G3DSA:1.10.287.950 551 743 3.0E-49 T 28-03-2018 APY29_RS13195 4a0a3815c89daa69bd312a62302fcbe6 795 Gene3D G3DSA:1.10.287.1060 463 550 0.0072 T 28-03-2018 APY29_RS13195 4a0a3815c89daa69bd312a62302fcbe6 795 Pfam PF00672 HAMP domain 215 263 3.2E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS07400 2b3da18369227c40e3f9bb8a11b59dca 497 Gene3D G3DSA:3.40.630.10 10 212 1.6E-22 T 28-03-2018 APY29_RS07400 2b3da18369227c40e3f9bb8a11b59dca 497 Pfam PF01546 Peptidase family M20/M25/M40 95 466 1.3E-20 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APY29_RS07400 2b3da18369227c40e3f9bb8a11b59dca 497 Pfam PF07687 Peptidase dimerisation domain 207 367 3.7E-13 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain APY29_RS07400 2b3da18369227c40e3f9bb8a11b59dca 497 SUPERFAMILY SSF53187 383 468 5.71E-48 T 28-03-2018 APY29_RS07400 2b3da18369227c40e3f9bb8a11b59dca 497 SUPERFAMILY SSF53187 12 209 5.71E-48 T 28-03-2018 APY29_RS07400 2b3da18369227c40e3f9bb8a11b59dca 497 Gene3D G3DSA:3.30.70.360 213 379 1.7E-35 T 28-03-2018 APY29_RS22045 7b8ee21d1016f691ec598cf218a863cf 300 Pfam PF00561 alpha/beta hydrolase fold 33 282 3.0E-23 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS22045 7b8ee21d1016f691ec598cf218a863cf 300 PRINTS PR00412 Epoxide hydrolase signature 110 123 5.4E-5 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 APY29_RS22045 7b8ee21d1016f691ec598cf218a863cf 300 PRINTS PR00412 Epoxide hydrolase signature 38 56 5.4E-5 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 APY29_RS22045 7b8ee21d1016f691ec598cf218a863cf 300 PRINTS PR00412 Epoxide hydrolase signature 272 294 5.4E-5 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 APY29_RS22045 7b8ee21d1016f691ec598cf218a863cf 300 Gene3D G3DSA:3.40.50.1820 1 299 1.9E-43 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS22045 7b8ee21d1016f691ec598cf218a863cf 300 SUPERFAMILY SSF53474 4 297 2.09E-61 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS04060 b5ec6937728996f8516d7936b7345da3 111 Pfam PF09361 Phasin protein 8 95 8.5E-7 T 28-03-2018 IPR018968 Phasin APY29_RS02265 1ddd284446eeddee156b26a86d5259b1 171 Pfam PF04542 Sigma-70 region 2 10 75 4.8E-10 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS02265 1ddd284446eeddee156b26a86d5259b1 171 Gene3D G3DSA:1.10.10.10 75 168 9.5E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS02265 1ddd284446eeddee156b26a86d5259b1 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 155 5.9E-22 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS02265 1ddd284446eeddee156b26a86d5259b1 171 Pfam PF08281 Sigma-70, region 4 102 153 2.0E-16 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS02265 1ddd284446eeddee156b26a86d5259b1 171 SUPERFAMILY SSF88659 97 156 2.83E-16 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS02265 1ddd284446eeddee156b26a86d5259b1 171 SUPERFAMILY SSF88946 9 86 1.26E-13 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS02265 1ddd284446eeddee156b26a86d5259b1 171 Gene3D G3DSA:1.10.1740.10 2 74 3.7E-14 T 28-03-2018 APY29_RS02265 1ddd284446eeddee156b26a86d5259b1 171 ProSitePatterns PS00622 LuxR-type HTH domain signature. 125 152 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS21310 21e1ea57e67385a7877a822bc4c82c65 327 SUPERFAMILY SSF63380 4 102 3.94E-19 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APY29_RS21310 21e1ea57e67385a7877a822bc4c82c65 327 Pfam PF00970 Oxidoreductase FAD-binding domain 25 104 7.6E-8 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 APY29_RS21310 21e1ea57e67385a7877a822bc4c82c65 327 SUPERFAMILY SSF52343 107 226 5.11E-29 T 28-03-2018 APY29_RS21310 21e1ea57e67385a7877a822bc4c82c65 327 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 267 275 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APY29_RS21310 21e1ea57e67385a7877a822bc4c82c65 327 PRINTS PR00409 Phthalate dioxygenase reductase family signature 114 133 4.0E-20 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 APY29_RS21310 21e1ea57e67385a7877a822bc4c82c65 327 PRINTS PR00409 Phthalate dioxygenase reductase family signature 92 106 4.0E-20 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 APY29_RS21310 21e1ea57e67385a7877a822bc4c82c65 327 PRINTS PR00409 Phthalate dioxygenase reductase family signature 139 148 4.0E-20 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 APY29_RS21310 21e1ea57e67385a7877a822bc4c82c65 327 PRINTS PR00409 Phthalate dioxygenase reductase family signature 30 40 4.0E-20 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 APY29_RS21310 21e1ea57e67385a7877a822bc4c82c65 327 PRINTS PR00409 Phthalate dioxygenase reductase family signature 190 198 4.0E-20 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 APY29_RS21310 21e1ea57e67385a7877a822bc4c82c65 327 SUPERFAMILY SSF54292 213 314 4.46E-22 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APY29_RS21310 21e1ea57e67385a7877a822bc4c82c65 327 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 239 311 8.8E-11 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APY29_RS21310 21e1ea57e67385a7877a822bc4c82c65 327 Gene3D G3DSA:3.10.20.30 227 320 1.3E-15 T 28-03-2018 IPR012675 Beta-grasp domain APY29_RS21310 21e1ea57e67385a7877a822bc4c82c65 327 Gene3D G3DSA:3.40.50.80 104 226 2.2E-24 T 28-03-2018 APY29_RS21310 21e1ea57e67385a7877a822bc4c82c65 327 Gene3D G3DSA:2.40.30.10 1 103 2.9E-18 T 28-03-2018 APY29_RS21310 21e1ea57e67385a7877a822bc4c82c65 327 Pfam PF00175 Oxidoreductase NAD-binding domain 115 204 8.7E-8 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APY29_RS13235 3a67bf087168192a19ffa07134ffafdf 82 Gene3D G3DSA:2.10.260.10 2 46 3.2E-14 T 28-03-2018 APY29_RS13235 3a67bf087168192a19ffa07134ffafdf 82 SMART SM00966 3 46 3.4E-11 T 28-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 APY29_RS13235 3a67bf087168192a19ffa07134ffafdf 82 SUPERFAMILY SSF89447 2 42 5.76E-11 T 28-03-2018 APY29_RS13235 3a67bf087168192a19ffa07134ffafdf 82 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 3 42 1.2E-12 T 28-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 APY29_RS13235 3a67bf087168192a19ffa07134ffafdf 82 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 43 5.6E-11 T 28-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 APY29_RS12005 c079511d2e13d974e7c826845b0d4019 437 Gene3D G3DSA:2.120.10.30 51 317 2.1E-32 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS12005 c079511d2e13d974e7c826845b0d4019 437 Gene3D G3DSA:2.120.10.30 318 436 4.3E-13 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS12005 c079511d2e13d974e7c826845b0d4019 437 Pfam PF07995 Glucose / Sorbosone dehydrogenase 164 356 1.1E-11 T 28-03-2018 IPR012938 Glucose/Sorbosone dehydrogenase APY29_RS12005 c079511d2e13d974e7c826845b0d4019 437 SUPERFAMILY SSF50952 121 431 1.31E-33 T 28-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 APY29_RS12005 c079511d2e13d974e7c826845b0d4019 437 SUPERFAMILY SSF50952 60 93 1.31E-33 T 28-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 APY29_RS15705 1722f343ec3e39703d0a1ced41106962 337 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 88 1.1E-23 T 28-03-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 APY29_RS15705 1722f343ec3e39703d0a1ced41106962 337 Gene3D G3DSA:2.160.10.10 208 335 1.7E-20 T 28-03-2018 APY29_RS15705 1722f343ec3e39703d0a1ced41106962 337 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 328 1.8E-125 T 28-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 APY29_RS15705 1722f343ec3e39703d0a1ced41106962 337 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 8 325 35.996 T 28-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 APY29_RS15705 1722f343ec3e39703d0a1ced41106962 337 SUPERFAMILY SSF51161 32 316 2.28E-77 T 28-03-2018 IPR011004 Trimeric LpxA-like APY29_RS15705 1722f343ec3e39703d0a1ced41106962 337 Gene3D G3DSA:2.160.10.10 22 207 8.5E-27 T 28-03-2018 APY29_RS15705 1722f343ec3e39703d0a1ced41106962 337 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 139 178 5.4E-5 T 28-03-2018 IPR001451 Hexapeptide repeat APY29_RS15705 1722f343ec3e39703d0a1ced41106962 337 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 221 256 7.5E-6 T 28-03-2018 IPR001451 Hexapeptide repeat APY29_RS07230 9384b76a5a46abb60c5ecea0195e0c12 466 PIRSF PIRSF006446 1 457 1.4E-180 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 APY29_RS07230 9384b76a5a46abb60c5ecea0195e0c12 466 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 435 1.6E-149 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 APY29_RS03015 3c236f6b21c71894cd99185300aca335 258 SUPERFAMILY SSF51735 9 255 6.98E-80 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS03015 3c236f6b21c71894cd99185300aca335 258 Gene3D G3DSA:3.40.50.10090 3 50 4.4E-11 T 28-03-2018 APY29_RS03015 3c236f6b21c71894cd99185300aca335 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 253 6.9E-62 T 28-03-2018 APY29_RS03015 3c236f6b21c71894cd99185300aca335 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 2.9E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03015 3c236f6b21c71894cd99185300aca335 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 2.9E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03015 3c236f6b21c71894cd99185300aca335 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 2.9E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03015 3c236f6b21c71894cd99185300aca335 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 3.2E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03015 3c236f6b21c71894cd99185300aca335 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 3.2E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03015 3c236f6b21c71894cd99185300aca335 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 3.2E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03015 3c236f6b21c71894cd99185300aca335 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 3.2E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03015 3c236f6b21c71894cd99185300aca335 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 3.2E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03015 3c236f6b21c71894cd99185300aca335 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 3.2E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03015 3c236f6b21c71894cd99185300aca335 258 Gene3D G3DSA:3.40.50.720 51 257 2.6E-65 T 28-03-2018 APY29_RS03015 3c236f6b21c71894cd99185300aca335 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APY29_RS03355 737e9037be7199d183d981779ee72a13 387 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 20 1.2E-8 T 28-03-2018 IPR027399 Alcohol dehydrogenase GroES-associated APY29_RS03355 737e9037be7199d183d981779ee72a13 387 Gene3D G3DSA:3.90.180.10 1 183 2.3E-48 T 28-03-2018 APY29_RS03355 737e9037be7199d183d981779ee72a13 387 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 152 8.8E-29 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APY29_RS03355 737e9037be7199d183d981779ee72a13 387 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 APY29_RS03355 737e9037be7199d183d981779ee72a13 387 Pfam PF00107 Zinc-binding dehydrogenase 197 283 2.6E-9 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APY29_RS03355 737e9037be7199d183d981779ee72a13 387 Gene3D G3DSA:3.40.50.720 184 343 1.5E-26 T 28-03-2018 APY29_RS03355 737e9037be7199d183d981779ee72a13 387 SUPERFAMILY SSF51735 164 349 1.73E-61 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS03355 737e9037be7199d183d981779ee72a13 387 SUPERFAMILY SSF50129 1 195 3.65E-57 T 28-03-2018 IPR011032 GroES-like APY29_RS18345 f84ee5cca638072e29042a5d7e7821ca 331 SMART SM00475 16 285 2.9E-73 T 28-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 APY29_RS18345 f84ee5cca638072e29042a5d7e7821ca 331 SMART SM00279 187 222 3.4E-10 T 28-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 APY29_RS18345 f84ee5cca638072e29042a5d7e7821ca 331 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 21 182 1.5E-39 T 28-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 APY29_RS18345 f84ee5cca638072e29042a5d7e7821ca 331 Gene3D G3DSA:3.40.50.1010 19 198 1.2E-56 T 28-03-2018 IPR029060 PIN domain-like APY29_RS18345 f84ee5cca638072e29042a5d7e7821ca 331 SUPERFAMILY SSF88723 20 174 8.83E-42 T 28-03-2018 IPR029060 PIN domain-like APY29_RS18345 f84ee5cca638072e29042a5d7e7821ca 331 SUPERFAMILY SSF47807 185 307 9.27E-23 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APY29_RS18345 f84ee5cca638072e29042a5d7e7821ca 331 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 185 284 3.7E-22 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APY29_RS18345 f84ee5cca638072e29042a5d7e7821ca 331 Gene3D G3DSA:1.10.150.20 199 285 7.9E-19 T 28-03-2018 APY29_RS13130 7560b8addfb8c6b224e93cbb9ff31f2c 752 Gene3D G3DSA:1.10.287.950 84 504 1.3E-21 T 28-03-2018 APY29_RS13130 7560b8addfb8c6b224e93cbb9ff31f2c 752 Gene3D G3DSA:1.10.287.950 505 699 6.5E-49 T 28-03-2018 APY29_RS13130 7560b8addfb8c6b224e93cbb9ff31f2c 752 SUPERFAMILY SSF158472 215 264 1.02E-7 T 28-03-2018 APY29_RS13130 7560b8addfb8c6b224e93cbb9ff31f2c 752 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 175 1.6E-17 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain APY29_RS13130 7560b8addfb8c6b224e93cbb9ff31f2c 752 SMART SM00304 215 267 0.0014 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13130 7560b8addfb8c6b224e93cbb9ff31f2c 752 SMART SM00304 395 447 17.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13130 7560b8addfb8c6b224e93cbb9ff31f2c 752 SUPERFAMILY SSF58104 415 697 7.19E-73 T 28-03-2018 APY29_RS13130 7560b8addfb8c6b224e93cbb9ff31f2c 752 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 508 662 4.9E-54 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS13130 7560b8addfb8c6b224e93cbb9ff31f2c 752 SMART SM00283 448 695 4.4E-89 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS16345 1ec5416d66c0ad58a536f39a186a75ff 170 Gene3D G3DSA:2.30.30.240 101 170 5.4E-19 T 28-03-2018 APY29_RS16345 1ec5416d66c0ad58a536f39a186a75ff 170 Pfam PF01782 RimM N-terminal domain 10 92 6.2E-20 T 28-03-2018 IPR002676 RimM protein GO:0006364 APY29_RS16345 1ec5416d66c0ad58a536f39a186a75ff 170 SUPERFAMILY SSF50447 8 95 9.53E-18 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain APY29_RS16345 1ec5416d66c0ad58a536f39a186a75ff 170 SUPERFAMILY SSF50346 101 170 8.63E-17 T 28-03-2018 IPR011033 PRC-barrel-like APY29_RS16345 1ec5416d66c0ad58a536f39a186a75ff 170 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 169 3.9E-51 T 28-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 APY29_RS16345 1ec5416d66c0ad58a536f39a186a75ff 170 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 170 22.402 T 28-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 APY29_RS16345 1ec5416d66c0ad58a536f39a186a75ff 170 Gene3D G3DSA:2.40.30.60 7 95 1.2E-19 T 28-03-2018 IPR002676 RimM protein GO:0006364 APY29_RS16345 1ec5416d66c0ad58a536f39a186a75ff 170 Pfam PF05239 PRC-barrel domain 98 165 1.1E-5 T 28-03-2018 IPR027275 PRC-barrel domain APY29_RS08305 1a78318d8bebf32bc32644eabd54a2cc 224 Gene3D G3DSA:3.30.1150.10 48 224 1.5E-20 T 28-03-2018 APY29_RS08305 1a78318d8bebf32bc32644eabd54a2cc 224 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 146 224 5.0E-19 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 APY29_RS08305 1a78318d8bebf32bc32644eabd54a2cc 224 SUPERFAMILY SSF74653 137 221 1.03E-22 T 28-03-2018 APY29_RS08305 1a78318d8bebf32bc32644eabd54a2cc 224 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 144 223 2.0E-24 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 APY29_RS02340 2693a894988f499a1d0cc8065a582bad 221 SUPERFAMILY SSF46894 125 215 1.98E-24 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS02340 2693a894988f499a1d0cc8065a582bad 221 Gene3D G3DSA:1.10.10.10 116 220 1.4E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS02340 2693a894988f499a1d0cc8065a582bad 221 SMART SM00448 1 112 6.4E-33 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS02340 2693a894988f499a1d0cc8065a582bad 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 215 2.1E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS02340 2693a894988f499a1d0cc8065a582bad 221 Gene3D G3DSA:3.40.50.2300 1 115 1.9E-30 T 28-03-2018 APY29_RS02340 2693a894988f499a1d0cc8065a582bad 221 SUPERFAMILY SSF52172 1 118 9.25E-34 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS02340 2693a894988f499a1d0cc8065a582bad 221 Pfam PF00072 Response regulator receiver domain 4 112 6.8E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS02340 2693a894988f499a1d0cc8065a582bad 221 SMART SM00862 145 216 1.3E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS07020 1403def0b7f23a44b2d8b5b4af661414 199 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 168 181 - T 28-03-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 APY29_RS07020 1403def0b7f23a44b2d8b5b4af661414 199 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 197 7.9E-63 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 APY29_RS07020 1403def0b7f23a44b2d8b5b4af661414 199 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 158 199 2.0E-14 T 28-03-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 APY29_RS07020 1403def0b7f23a44b2d8b5b4af661414 199 Gene3D G3DSA:2.30.110.10 2 199 4.7E-62 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 APY29_RS07020 1403def0b7f23a44b2d8b5b4af661414 199 PIRSF PIRSF000190 2 199 8.3E-64 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 APY29_RS07020 1403def0b7f23a44b2d8b5b4af661414 199 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 2 105 1.9E-27 T 28-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 APY29_RS07020 1403def0b7f23a44b2d8b5b4af661414 199 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 4 199 34.946 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 APY29_RS07020 1403def0b7f23a44b2d8b5b4af661414 199 SUPERFAMILY SSF50475 2 199 1.04E-55 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 APY29_RS13485 1c8a43b190185951ea7d2b90fc8c7f93 200 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 197 32.159 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 APY29_RS13485 1c8a43b190185951ea7d2b90fc8c7f93 200 Gene3D G3DSA:3.40.50.880 1 198 1.6E-40 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS13485 1c8a43b190185951ea7d2b90fc8c7f93 200 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 197 1.8E-65 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 APY29_RS13485 1c8a43b190185951ea7d2b90fc8c7f93 200 SUPERFAMILY SSF52317 4 197 7.74E-49 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS13485 1c8a43b190185951ea7d2b90fc8c7f93 200 PIRSF PIRSF000495 2 199 3.1E-62 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 APY29_RS13485 1c8a43b190185951ea7d2b90fc8c7f93 200 Pfam PF00117 Glutamine amidotransferase class-I 6 195 2.1E-19 T 28-03-2018 IPR017926 Glutamine amidotransferase APY29_RS01645 fb8b5b6b73c66aae3d4bd787b7e87aac 215 Gene3D G3DSA:2.50.20.10 30 202 3.1E-10 T 28-03-2018 APY29_RS07320 e05c31963ac0bd15c1c9971aa387ab89 333 Gene3D G3DSA:3.40.50.10490 12 207 2.1E-50 T 28-03-2018 APY29_RS07320 e05c31963ac0bd15c1c9971aa387ab89 333 Gene3D G3DSA:3.10.580.10 208 263 8.6E-10 T 28-03-2018 APY29_RS07320 e05c31963ac0bd15c1c9971aa387ab89 333 Pfam PF00571 CBS domain 278 330 1.0E-7 T 28-03-2018 IPR000644 CBS domain APY29_RS07320 e05c31963ac0bd15c1c9971aa387ab89 333 Pfam PF00571 CBS domain 212 267 1.1E-8 T 28-03-2018 IPR000644 CBS domain APY29_RS07320 e05c31963ac0bd15c1c9971aa387ab89 333 Gene3D G3DSA:3.10.580.10 264 331 6.5E-12 T 28-03-2018 APY29_RS07320 e05c31963ac0bd15c1c9971aa387ab89 333 Pfam PF01380 SIS domain 50 181 1.4E-31 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 APY29_RS07320 e05c31963ac0bd15c1c9971aa387ab89 333 PIRSF PIRSF004692 5 333 7.6E-133 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 APY29_RS07320 e05c31963ac0bd15c1c9971aa387ab89 333 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 54 323 6.0E-110 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 APY29_RS07320 e05c31963ac0bd15c1c9971aa387ab89 333 SMART SM00116 284 332 0.0058 T 28-03-2018 IPR000644 CBS domain APY29_RS07320 e05c31963ac0bd15c1c9971aa387ab89 333 SMART SM00116 219 267 2.8E-5 T 28-03-2018 IPR000644 CBS domain APY29_RS07320 e05c31963ac0bd15c1c9971aa387ab89 333 SUPERFAMILY SSF53697 22 331 1.13E-68 T 28-03-2018 APY29_RS07365 204086d1b0e448e0dfeab33e8a3edd03 352 Pfam PF02769 AIR synthase related protein, C-terminal domain 181 346 5.1E-37 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain APY29_RS07365 204086d1b0e448e0dfeab33e8a3edd03 352 Gene3D G3DSA:3.30.1330.10 42 166 3.9E-52 T 28-03-2018 IPR016188 PurM-like, N-terminal domain APY29_RS07365 204086d1b0e448e0dfeab33e8a3edd03 352 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 12 351 45.9 T 28-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 APY29_RS07365 204086d1b0e448e0dfeab33e8a3edd03 352 SUPERFAMILY SSF55326 12 174 5.08E-53 T 28-03-2018 IPR016188 PurM-like, N-terminal domain APY29_RS07365 204086d1b0e448e0dfeab33e8a3edd03 352 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 12 341 9.5E-136 T 28-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 APY29_RS07365 204086d1b0e448e0dfeab33e8a3edd03 352 Gene3D G3DSA:3.90.650.10 176 351 1.3E-59 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain APY29_RS07365 204086d1b0e448e0dfeab33e8a3edd03 352 SUPERFAMILY SSF56042 176 346 2.69E-57 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain APY29_RS07365 204086d1b0e448e0dfeab33e8a3edd03 352 Pfam PF00586 AIR synthase related protein, N-terminal domain 66 168 6.8E-14 T 28-03-2018 IPR016188 PurM-like, N-terminal domain APY29_RS09710 8e5145aa569186f97ceeabc3350bf775 450 PIRSF PIRSF000521 204 449 1.3E-17 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APY29_RS09710 8e5145aa569186f97ceeabc3350bf775 450 PIRSF PIRSF000521 29 155 3.3E-6 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APY29_RS09710 8e5145aa569186f97ceeabc3350bf775 450 Pfam PF00202 Aminotransferase class-III 37 446 2.0E-92 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APY29_RS09710 8e5145aa569186f97ceeabc3350bf775 450 Gene3D G3DSA:3.40.640.10 202 337 6.1E-47 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS09710 8e5145aa569186f97ceeabc3350bf775 450 SUPERFAMILY SSF53383 22 448 1.83E-122 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS09710 8e5145aa569186f97ceeabc3350bf775 450 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 259 296 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APY29_RS09710 8e5145aa569186f97ceeabc3350bf775 450 Gene3D G3DSA:3.90.1150.10 6 199 1.6E-43 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS09710 8e5145aa569186f97ceeabc3350bf775 450 Gene3D G3DSA:3.90.1150.10 338 449 4.8E-12 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS17075 4b75f215b2f19f5cff4d8319a3b76f49 765 SUPERFAMILY SSF56003 178 763 1.31E-154 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APY29_RS17075 4b75f215b2f19f5cff4d8319a3b76f49 765 Gene3D G3DSA:3.30.365.10 183 291 4.1E-23 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APY29_RS17075 4b75f215b2f19f5cff4d8319a3b76f49 765 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 183 705 3.4E-108 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APY29_RS17075 4b75f215b2f19f5cff4d8319a3b76f49 765 Gene3D G3DSA:3.90.1170.50 9 155 2.2E-33 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APY29_RS17075 4b75f215b2f19f5cff4d8319a3b76f49 765 Gene3D G3DSA:3.30.365.10 607 765 3.6E-43 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APY29_RS17075 4b75f215b2f19f5cff4d8319a3b76f49 765 SUPERFAMILY SSF54665 23 160 1.18E-37 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APY29_RS17075 4b75f215b2f19f5cff4d8319a3b76f49 765 SMART SM01008 41 155 3.9E-38 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APY29_RS17075 4b75f215b2f19f5cff4d8319a3b76f49 765 Gene3D G3DSA:3.30.365.10 292 456 8.5E-31 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APY29_RS17075 4b75f215b2f19f5cff4d8319a3b76f49 765 Gene3D G3DSA:3.30.365.10 457 606 5.7E-33 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APY29_RS17075 4b75f215b2f19f5cff4d8319a3b76f49 765 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 41 151 6.4E-22 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APY29_RS16215 2b20e5903e438e2d07b9527134ad2d14 393 PIRSF PIRSF016578 221 392 1.9E-15 T 28-03-2018 APY29_RS16215 2b20e5903e438e2d07b9527134ad2d14 393 PIRSF PIRSF016578 6 201 8.2E-11 T 28-03-2018 APY29_RS16215 2b20e5903e438e2d07b9527134ad2d14 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 125 5.0E-31 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 APY29_RS16215 2b20e5903e438e2d07b9527134ad2d14 393 Gene3D G3DSA:1.20.140.10 225 392 6.6E-64 T 28-03-2018 APY29_RS16215 2b20e5903e438e2d07b9527134ad2d14 393 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 132 144 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APY29_RS16215 2b20e5903e438e2d07b9527134ad2d14 393 SUPERFAMILY SSF47203 235 388 6.12E-60 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APY29_RS16215 2b20e5903e438e2d07b9527134ad2d14 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 224 1.1E-26 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 APY29_RS16215 2b20e5903e438e2d07b9527134ad2d14 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 386 1.5E-49 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APY29_RS16215 2b20e5903e438e2d07b9527134ad2d14 393 Gene3D G3DSA:1.10.540.10 4 128 8.2E-34 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 APY29_RS16215 2b20e5903e438e2d07b9527134ad2d14 393 SUPERFAMILY SSF56645 12 249 1.02E-82 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APY29_RS16215 2b20e5903e438e2d07b9527134ad2d14 393 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 344 363 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APY29_RS16215 2b20e5903e438e2d07b9527134ad2d14 393 Gene3D G3DSA:2.40.110.10 129 224 7.6E-40 T 28-03-2018 APY29_RS16290 7195b75cfddce90cc591341828fc3294 758 Pfam PF05593 RHS Repeat 544 578 2.8E-7 T 28-03-2018 IPR031325 RHS repeat APY29_RS18580 4f4d0ec4a5b606b52222581772609e78 185 Pfam PF01923 Cobalamin adenosyltransferase 8 166 1.8E-56 T 28-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 APY29_RS18580 4f4d0ec4a5b606b52222581772609e78 185 Gene3D G3DSA:1.20.1200.10 17 184 1.1E-60 T 28-03-2018 APY29_RS18580 4f4d0ec4a5b606b52222581772609e78 185 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 28 178 7.0E-81 T 28-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 APY29_RS18580 4f4d0ec4a5b606b52222581772609e78 185 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 179 1.4E-56 T 28-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 APY29_RS18580 4f4d0ec4a5b606b52222581772609e78 185 SUPERFAMILY SSF89028 7 179 6.47E-58 T 28-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 APY29_RS14875 8cda890f1e9c72f816c239ca66444d67 226 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APY29_RS14875 8cda890f1e9c72f816c239ca66444d67 226 Gene3D G3DSA:3.40.1050.10 1 220 2.3E-71 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APY29_RS14875 8cda890f1e9c72f816c239ca66444d67 226 Pfam PF00484 Carbonic anhydrase 34 190 7.9E-53 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APY29_RS14875 8cda890f1e9c72f816c239ca66444d67 226 SMART SM00947 27 194 2.6E-68 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APY29_RS14875 8cda890f1e9c72f816c239ca66444d67 226 SUPERFAMILY SSF53056 1 204 6.8E-68 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APY29_RS14875 8cda890f1e9c72f816c239ca66444d67 226 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APY29_RS05125 186d725ca04ccb8b780b255b1bbcf363 205 Gene3D G3DSA:3.40.50.1000 2 201 9.5E-16 T 28-03-2018 IPR023214 HAD-like domain APY29_RS05125 186d725ca04ccb8b780b255b1bbcf363 205 SUPERFAMILY SSF56784 9 196 8.26E-25 T 28-03-2018 IPR023214 HAD-like domain APY29_RS05125 186d725ca04ccb8b780b255b1bbcf363 205 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 141 186 8.9E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS10390 b2c895381369709b9542886f337b48bf 414 PIRSF PIRSF000151 1 414 2.8E-174 T 28-03-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 APY29_RS10390 b2c895381369709b9542886f337b48bf 414 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 401 8.1E-139 T 28-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 APY29_RS10390 b2c895381369709b9542886f337b48bf 414 SUPERFAMILY SSF53720 6 413 2.62E-110 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APY29_RS10390 b2c895381369709b9542886f337b48bf 414 Gene3D G3DSA:3.40.605.10 238 414 1.1E-36 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APY29_RS10390 b2c895381369709b9542886f337b48bf 414 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 320 341 - T 28-03-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 APY29_RS10390 b2c895381369709b9542886f337b48bf 414 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 413 41.426 T 28-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 APY29_RS10390 b2c895381369709b9542886f337b48bf 414 Pfam PF00171 Aldehyde dehydrogenase family 11 286 3.4E-13 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APY29_RS10390 b2c895381369709b9542886f337b48bf 414 Gene3D G3DSA:3.40.605.10 2 237 5.2E-39 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APY29_RS19805 288fb35e09eb932cb54ac7faf0307da1 183 PIRSF PIRSF039093 6 183 2.0E-81 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 APY29_RS19805 288fb35e09eb932cb54ac7faf0307da1 183 Pfam PF00227 Proteasome subunit 10 181 1.7E-20 T 28-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 APY29_RS19805 288fb35e09eb932cb54ac7faf0307da1 183 Gene3D G3DSA:3.60.20.10 13 183 2.8E-28 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APY29_RS19805 288fb35e09eb932cb54ac7faf0307da1 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 12 183 40.915 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 APY29_RS19805 288fb35e09eb932cb54ac7faf0307da1 183 SUPERFAMILY SSF56235 9 182 9.57E-53 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APY29_RS19805 288fb35e09eb932cb54ac7faf0307da1 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 13 183 1.3E-81 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 APY29_RS03940 c12be2eb62c2a3f0d8aab05b634eeb83 423 Pfam PF13437 HlyD family secretion protein 241 334 8.7E-12 T 28-03-2018 APY29_RS03940 c12be2eb62c2a3f0d8aab05b634eeb83 423 Pfam PF13533 Biotin-lipoyl like 93 129 2.0E-7 T 28-03-2018 APY29_RS03940 c12be2eb62c2a3f0d8aab05b634eeb83 423 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 213 422 1.0E-30 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 APY29_RS03940 c12be2eb62c2a3f0d8aab05b634eeb83 423 Gene3D G3DSA:1.20.1600.10 25 347 2.2E-16 T 28-03-2018 APY29_RS21035 5b1c4008fd62985113ada898fcffbf13 187 SUPERFAMILY SSF53955 56 182 3.92E-41 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS21035 5b1c4008fd62985113ada898fcffbf13 187 Gene3D G3DSA:1.10.530.10 56 178 1.2E-16 T 28-03-2018 APY29_RS21035 5b1c4008fd62985113ada898fcffbf13 187 Pfam PF01464 Transglycosylase SLT domain 66 162 9.8E-19 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 APY29_RS12595 55ac931d7ef16f19f65a0e9cca02a787 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 4 101 28.651 T 28-03-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS APY29_RS12595 55ac931d7ef16f19f65a0e9cca02a787 106 SUPERFAMILY SSF54736 21 105 2.14E-32 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APY29_RS12595 55ac931d7ef16f19f65a0e9cca02a787 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 4.5E-34 T 28-03-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 APY29_RS12595 55ac931d7ef16f19f65a0e9cca02a787 106 Gene3D G3DSA:3.30.1390.10 13 105 3.2E-36 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APY29_RS23070 8b72603d0f8b1636d2ce64f513d5b698 113 Gene3D G3DSA:3.40.50.1010 1 113 4.4E-17 T 28-03-2018 IPR029060 PIN domain-like APY29_RS23070 8b72603d0f8b1636d2ce64f513d5b698 113 SUPERFAMILY SSF88723 5 112 1.71E-19 T 28-03-2018 IPR029060 PIN domain-like APY29_RS23070 8b72603d0f8b1636d2ce64f513d5b698 113 Pfam PF01850 PIN domain 4 102 4.7E-11 T 28-03-2018 IPR002716 PIN domain APY29_RS00720 1330ed562730879ce01e460a85cbdb04 298 Gene3D G3DSA:3.40.50.410 56 222 6.6E-17 T 28-03-2018 IPR002035 von Willebrand factor, type A APY29_RS00720 1330ed562730879ce01e460a85cbdb04 298 Pfam PF01882 Protein of unknown function DUF58 44 132 8.1E-21 T 28-03-2018 IPR002881 Domain of unknown function DUF58 APY29_RS01720 280831ab5ff4e0b0fe565b423e1c026e 599 SUPERFAMILY SSF48208 190 590 1.74E-102 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 APY29_RS01720 280831ab5ff4e0b0fe565b423e1c026e 599 Pfam PF00723 Glycosyl hydrolases family 15 224 585 3.9E-53 T 28-03-2018 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: R-HSA-70221 APY29_RS01720 280831ab5ff4e0b0fe565b423e1c026e 599 Gene3D G3DSA:1.50.10.10 191 541 3.1E-90 T 28-03-2018 APY29_RS01720 280831ab5ff4e0b0fe565b423e1c026e 599 Gene3D G3DSA:1.50.10.10 542 598 0.019 T 28-03-2018 APY29_RS22185 a841c68eaf849ca0eff82b1837099608 475 Pfam PF00072 Response regulator receiver domain 10 117 9.8E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS22185 a841c68eaf849ca0eff82b1837099608 475 SUPERFAMILY SSF46689 400 468 3.54E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS22185 a841c68eaf849ca0eff82b1837099608 475 SMART SM00448 8 120 1.9E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS22185 a841c68eaf849ca0eff82b1837099608 475 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APY29_RS22185 a841c68eaf849ca0eff82b1837099608 475 Pfam PF00158 Sigma-54 interaction domain 146 312 2.4E-68 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APY29_RS22185 a841c68eaf849ca0eff82b1837099608 475 Gene3D G3DSA:3.40.50.2300 2 130 2.7E-30 T 28-03-2018 APY29_RS22185 a841c68eaf849ca0eff82b1837099608 475 Gene3D G3DSA:1.10.10.60 392 469 1.3E-10 T 28-03-2018 APY29_RS22185 a841c68eaf849ca0eff82b1837099608 475 Pfam PF02954 Bacterial regulatory protein, Fis family 431 468 4.4E-9 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS22185 a841c68eaf849ca0eff82b1837099608 475 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 10 469 4.5E-223 T 28-03-2018 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 APY29_RS22185 a841c68eaf849ca0eff82b1837099608 475 SUPERFAMILY SSF52540 146 389 1.27E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS22185 a841c68eaf849ca0eff82b1837099608 475 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APY29_RS22185 a841c68eaf849ca0eff82b1837099608 475 Gene3D G3DSA:1.10.8.60 319 391 1.8E-21 T 28-03-2018 APY29_RS22185 a841c68eaf849ca0eff82b1837099608 475 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site APY29_RS22185 a841c68eaf849ca0eff82b1837099608 475 SMART SM00382 166 309 1.0E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS22185 a841c68eaf849ca0eff82b1837099608 475 SUPERFAMILY SSF52172 9 190 7.26E-38 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS22185 a841c68eaf849ca0eff82b1837099608 475 Gene3D G3DSA:3.40.50.300 141 318 5.3E-30 T 28-03-2018 APY29_RS18635 66269a950a5bf329b44b8dea2ec7bbd8 294 Gene3D G3DSA:1.10.3720.10 14 283 1.1E-45 T 28-03-2018 APY29_RS18635 66269a950a5bf329b44b8dea2ec7bbd8 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 290 8.4E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS18635 66269a950a5bf329b44b8dea2ec7bbd8 294 SUPERFAMILY SSF161098 87 286 1.44E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS17150 9bd16e35639aff885498cec54df38a3d 289 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 9 288 19.625 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 APY29_RS17150 9bd16e35639aff885498cec54df38a3d 289 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 11 283 2.1E-47 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 APY29_RS17150 9bd16e35639aff885498cec54df38a3d 289 SUPERFAMILY SSF53613 8 280 5.61E-54 T 28-03-2018 IPR029056 Ribokinase-like APY29_RS17150 9bd16e35639aff885498cec54df38a3d 289 Pfam PF01256 Carbohydrate kinase 32 276 4.5E-37 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 APY29_RS17150 9bd16e35639aff885498cec54df38a3d 289 Gene3D G3DSA:3.40.1190.20 2 287 1.0E-37 T 28-03-2018 IPR029056 Ribokinase-like APY29_RS11170 92af9baab6af83e73779118a5a402339 345 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 7 341 37.203 T 28-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 APY29_RS11170 92af9baab6af83e73779118a5a402339 345 SUPERFAMILY SSF52540 52 201 9.56E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11170 92af9baab6af83e73779118a5a402339 345 Gene3D G3DSA:3.20.20.120 263 323 0.056 T 28-03-2018 IPR029065 Enolase C-terminal domain-like APY29_RS11170 92af9baab6af83e73779118a5a402339 345 Gene3D G3DSA:3.40.50.300 53 145 0.0014 T 28-03-2018 APY29_RS11170 92af9baab6af83e73779118a5a402339 345 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 30 325 1.1E-65 T 28-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 APY29_RS11170 92af9baab6af83e73779118a5a402339 345 Gene3D G3DSA:3.40.50.720 146 262 1.3E-5 T 28-03-2018 APY29_RS11170 92af9baab6af83e73779118a5a402339 345 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 23 336 5.3E-105 T 28-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 APY29_RS05475 be33daed1dbf73f4dd1c215718983b6e 258 Gene3D G3DSA:3.40.190.10 121 218 6.3E-29 T 28-03-2018 APY29_RS05475 be33daed1dbf73f4dd1c215718983b6e 258 Gene3D G3DSA:3.40.190.10 23 120 1.2E-15 T 28-03-2018 APY29_RS05475 be33daed1dbf73f4dd1c215718983b6e 258 PIRSF PIRSF004846 2 258 4.1E-70 T 28-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 APY29_RS05475 be33daed1dbf73f4dd1c215718983b6e 258 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 34 251 4.7E-59 T 28-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 APY29_RS05475 be33daed1dbf73f4dd1c215718983b6e 258 Pfam PF13531 Bacterial extracellular solute-binding protein 29 254 7.5E-46 T 28-03-2018 APY29_RS05475 be33daed1dbf73f4dd1c215718983b6e 258 SUPERFAMILY SSF53850 28 254 2.05E-64 T 28-03-2018 APY29_RS15605 c7b156a2f803423ebf5221ee981c2e39 399 Gene3D G3DSA:1.10.166.10 126 193 1.3E-23 T 28-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 APY29_RS15605 c7b156a2f803423ebf5221ee981c2e39 399 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 256 290 9.6E-5 T 28-03-2018 IPR001451 Hexapeptide repeat APY29_RS15605 c7b156a2f803423ebf5221ee981c2e39 399 Gene3D G3DSA:2.160.10.10 211 381 8.5E-37 T 28-03-2018 APY29_RS15605 c7b156a2f803423ebf5221ee981c2e39 399 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 124 396 54.66 T 28-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 APY29_RS15605 c7b156a2f803423ebf5221ee981c2e39 399 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 299 333 7.0E-11 T 28-03-2018 IPR001451 Hexapeptide repeat APY29_RS15605 c7b156a2f803423ebf5221ee981c2e39 399 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 127 193 6.2E-22 T 28-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 APY29_RS15605 c7b156a2f803423ebf5221ee981c2e39 399 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 130 396 5.8E-129 T 28-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 APY29_RS15605 c7b156a2f803423ebf5221ee981c2e39 399 SUPERFAMILY SSF51161 129 380 4.57E-72 T 28-03-2018 IPR011004 Trimeric LpxA-like APY29_RS11805 f7f04607341ed6446c4ca42ed77f45cb 430 PIRSF PIRSF000124 12 429 6.4E-49 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 APY29_RS11805 f7f04607341ed6446c4ca42ed77f45cb 430 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 323 421 9.2E-20 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 APY29_RS11805 f7f04607341ed6446c4ca42ed77f45cb 430 SUPERFAMILY SSF52413 314 426 6.28E-26 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 APY29_RS11805 f7f04607341ed6446c4ca42ed77f45cb 430 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 13 186 5.0E-29 T 28-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 APY29_RS11805 f7f04607341ed6446c4ca42ed77f45cb 430 SUPERFAMILY SSF48179 207 297 1.36E-25 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APY29_RS11805 f7f04607341ed6446c4ca42ed77f45cb 430 Gene3D G3DSA:1.20.5.170 207 229 1.9E-10 T 28-03-2018 APY29_RS11805 f7f04607341ed6446c4ca42ed77f45cb 430 PIRSF PIRSF500136 5 430 6.5E-145 T 28-03-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 APY29_RS11805 f7f04607341ed6446c4ca42ed77f45cb 430 Gene3D G3DSA:3.40.50.720 9 203 4.6E-38 T 28-03-2018 APY29_RS11805 f7f04607341ed6446c4ca42ed77f45cb 430 SMART SM00984 323 423 9.9E-35 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 APY29_RS11805 f7f04607341ed6446c4ca42ed77f45cb 430 Gene3D G3DSA:3.40.50.720 230 429 9.0E-55 T 28-03-2018 APY29_RS11805 f7f04607341ed6446c4ca42ed77f45cb 430 SUPERFAMILY SSF51735 13 197 3.65E-43 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS11805 f7f04607341ed6446c4ca42ed77f45cb 430 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 208 296 1.8E-24 T 28-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 APY29_RS11805 f7f04607341ed6446c4ca42ed77f45cb 430 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 13 418 2.6E-112 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 APY29_RS03045 32281bddb38d168a494d3be97ebbe0fd 240 Gene3D G3DSA:3.30.1490.40 3 59 0.0015 T 28-03-2018 IPR035445 GYF-like domain APY29_RS03045 32281bddb38d168a494d3be97ebbe0fd 240 Gene3D G3DSA:3.30.700.10 126 240 6.4E-20 T 28-03-2018 APY29_RS03045 32281bddb38d168a494d3be97ebbe0fd 240 Pfam PF14237 Domain of unknown function (DUF4339) 4 48 2.3E-12 T 28-03-2018 IPR025640 Domain of unknown function DUF4339 Reactome: R-HSA-6798695 APY29_RS03045 32281bddb38d168a494d3be97ebbe0fd 240 Pfam PF00114 Pilin (bacterial filament) 133 239 4.8E-16 T 28-03-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 APY29_RS03045 32281bddb38d168a494d3be97ebbe0fd 240 SUPERFAMILY SSF54523 126 239 1.15E-22 T 28-03-2018 APY29_RS19470 e31bab340de37f33465513387f3e8750 200 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS19470 e31bab340de37f33465513387f3e8750 200 Gene3D G3DSA:2.10.70.20 151 199 1.3E-11 T 28-03-2018 APY29_RS19470 e31bab340de37f33465513387f3e8750 200 Gene3D G3DSA:3.10.610.10 40 146 1.4E-24 T 28-03-2018 APY29_RS19470 e31bab340de37f33465513387f3e8750 200 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 3.3E-10 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS19470 e31bab340de37f33465513387f3e8750 200 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 8 195 1.8E-40 T 28-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 APY29_RS19470 e31bab340de37f33465513387f3e8750 200 Pfam PF11612 Type II secretion system (T2SS), protein J 60 193 2.2E-32 T 28-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 APY29_RS19470 e31bab340de37f33465513387f3e8750 200 SUPERFAMILY SSF54523 41 198 3.53E-38 T 28-03-2018 APY29_RS19470 e31bab340de37f33465513387f3e8750 200 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 1.1E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS03050 bec8c17a903331733de78eb90ab74c1f 157 Pfam PF04361 Protein of unknown function (DUF494) 5 157 3.6E-55 T 28-03-2018 IPR007456 Smg APY29_RS03050 bec8c17a903331733de78eb90ab74c1f 157 Hamap MF_00598 Protein Smg [smg]. 5 157 30.746 T 28-03-2018 IPR007456 Smg APY29_RS02335 58c9be3e994853b5b32da336024acc37 394 SUPERFAMILY SSF47384 149 231 4.71E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS02335 58c9be3e994853b5b32da336024acc37 394 SMART SM00388 166 231 2.0E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS02335 58c9be3e994853b5b32da336024acc37 394 SMART SM00304 113 165 3.1E-4 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS02335 58c9be3e994853b5b32da336024acc37 394 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 330 1.8E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS02335 58c9be3e994853b5b32da336024acc37 394 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 366 1.8E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS02335 58c9be3e994853b5b32da336024acc37 394 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 344 1.8E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS02335 58c9be3e994853b5b32da336024acc37 394 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 279 384 2.3E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS02335 58c9be3e994853b5b32da336024acc37 394 Pfam PF00512 His Kinase A (phospho-acceptor) domain 167 231 3.3E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS02335 58c9be3e994853b5b32da336024acc37 394 SMART SM00387 275 389 1.2E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS02335 58c9be3e994853b5b32da336024acc37 394 Gene3D G3DSA:1.10.287.130 156 227 4.5E-14 T 28-03-2018 APY29_RS02335 58c9be3e994853b5b32da336024acc37 394 Gene3D G3DSA:3.30.565.10 237 390 2.5E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS02335 58c9be3e994853b5b32da336024acc37 394 SUPERFAMILY SSF55874 220 385 3.8E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS09780 dcdd5b0a572b9286cb9b7d6c86cb11b0 455 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 255 292 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APY29_RS09780 dcdd5b0a572b9286cb9b7d6c86cb11b0 455 Gene3D G3DSA:3.90.1150.10 2 179 2.2E-40 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS09780 dcdd5b0a572b9286cb9b7d6c86cb11b0 455 Pfam PF00202 Aminotransferase class-III 33 442 8.7E-89 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APY29_RS09780 dcdd5b0a572b9286cb9b7d6c86cb11b0 455 Gene3D G3DSA:3.90.1150.10 333 449 3.4E-11 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS09780 dcdd5b0a572b9286cb9b7d6c86cb11b0 455 SUPERFAMILY SSF53383 12 447 1.15E-115 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS09780 dcdd5b0a572b9286cb9b7d6c86cb11b0 455 Gene3D G3DSA:3.40.640.10 192 332 1.2E-41 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS15025 6e3ea97611438ddbae0afd2cfa4bd4e3 250 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 108 250 9.4E-27 T 28-03-2018 IPR018636 Protein of unknown function DUF2058 APY29_RS08165 fe74a8b3026e90edb67876c4549782a5 198 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 19 187 9.0E-42 T 28-03-2018 IPR012912 Plasmid pRiA4b, Orf3 APY29_RS08165 fe74a8b3026e90edb67876c4549782a5 198 Gene3D G3DSA:3.10.290.30 12 191 5.3E-41 T 28-03-2018 IPR024047 Protein MM3350-like domain APY29_RS08165 fe74a8b3026e90edb67876c4549782a5 198 SUPERFAMILY SSF159941 18 190 1.18E-44 T 28-03-2018 IPR024047 Protein MM3350-like domain APY29_RS16240 1af68aa61bb0d6dab762b9d604a77c0b 854 SUPERFAMILY SSF49785 56 251 1.46E-39 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS16240 1af68aa61bb0d6dab762b9d604a77c0b 854 Gene3D G3DSA:2.60.40.10 652 732 2.5E-21 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS16240 1af68aa61bb0d6dab762b9d604a77c0b 854 Gene3D G3DSA:3.20.20.80 365 651 7.3E-51 T 28-03-2018 APY29_RS16240 1af68aa61bb0d6dab762b9d604a77c0b 854 SUPERFAMILY SSF51445 369 651 9.78E-72 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS16240 1af68aa61bb0d6dab762b9d604a77c0b 854 SUPERFAMILY SSF49303 259 363 1.5E-15 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APY29_RS16240 1af68aa61bb0d6dab762b9d604a77c0b 854 PRINTS PR00132 Glycosyl hydrolase family 2 signature 375 389 2.1E-6 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 APY29_RS16240 1af68aa61bb0d6dab762b9d604a77c0b 854 PRINTS PR00132 Glycosyl hydrolase family 2 signature 464 479 2.1E-6 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 APY29_RS16240 1af68aa61bb0d6dab762b9d604a77c0b 854 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 372 532 2.0E-27 T 28-03-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 APY29_RS16240 1af68aa61bb0d6dab762b9d604a77c0b 854 Gene3D G3DSA:2.60.40.10 733 845 1.2E-9 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS16240 1af68aa61bb0d6dab762b9d604a77c0b 854 Gene3D G3DSA:2.60.40.10 249 364 2.0E-23 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS16240 1af68aa61bb0d6dab762b9d604a77c0b 854 Pfam PF00703 Glycosyl hydrolases family 2 253 363 1.0E-15 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APY29_RS16240 1af68aa61bb0d6dab762b9d604a77c0b 854 Pfam PF16355 Domain of unknown function (DUF4982) 672 726 6.2E-15 T 28-03-2018 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APY29_RS16240 1af68aa61bb0d6dab762b9d604a77c0b 854 Gene3D G3DSA:2.60.120.260 33 248 4.2E-37 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS16240 1af68aa61bb0d6dab762b9d604a77c0b 854 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 67 248 9.0E-16 T 28-03-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APY29_RS04975 2a29e9180cb2b5669a9d3e76ad490503 357 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 352 1.0E-156 T 28-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 APY29_RS04975 2a29e9180cb2b5669a9d3e76ad490503 357 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 353 3.8E-135 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 APY29_RS04975 2a29e9180cb2b5669a9d3e76ad490503 357 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 357 52.375 T 28-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 APY29_RS04975 2a29e9180cb2b5669a9d3e76ad490503 357 Gene3D G3DSA:3.40.718.10 1 357 1.4E-124 T 28-03-2018 APY29_RS04975 2a29e9180cb2b5669a9d3e76ad490503 357 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 APY29_RS04975 2a29e9180cb2b5669a9d3e76ad490503 357 SMART SM01329 4 353 4.1E-207 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 APY29_RS04975 2a29e9180cb2b5669a9d3e76ad490503 357 SUPERFAMILY SSF53659 1 357 1.38E-123 T 28-03-2018 APY29_RS02190 0321cd1a381a3f251de871b769fca4ba 563 Gene3D G3DSA:3.40.630.10 249 521 1.3E-34 T 28-03-2018 APY29_RS02190 0321cd1a381a3f251de871b769fca4ba 563 SUPERFAMILY SSF52025 141 227 1.11E-8 T 28-03-2018 APY29_RS02190 0321cd1a381a3f251de871b769fca4ba 563 Pfam PF02225 PA domain 141 247 5.2E-9 T 28-03-2018 IPR003137 PA domain APY29_RS02190 0321cd1a381a3f251de871b769fca4ba 563 Pfam PF04389 Peptidase family M28 312 528 2.0E-49 T 28-03-2018 IPR007484 Peptidase M28 APY29_RS02190 0321cd1a381a3f251de871b769fca4ba 563 Gene3D G3DSA:3.50.30.30 109 248 1.4E-15 T 28-03-2018 APY29_RS02190 0321cd1a381a3f251de871b769fca4ba 563 SUPERFAMILY SSF53187 40 86 9.44E-65 T 28-03-2018 APY29_RS02190 0321cd1a381a3f251de871b769fca4ba 563 SUPERFAMILY SSF53187 296 539 9.44E-65 T 28-03-2018 APY29_RS21740 550cd6978990a5665919f58abfe9753c 190 Gene3D G3DSA:3.30.70.1560 83 165 5.7E-27 T 28-03-2018 APY29_RS21740 550cd6978990a5665919f58abfe9753c 190 Pfam PF00849 RNA pseudouridylate synthase 2 149 1.0E-18 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS21740 550cd6978990a5665919f58abfe9753c 190 SUPERFAMILY SSF55120 2 179 8.96E-42 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS21740 550cd6978990a5665919f58abfe9753c 190 Gene3D G3DSA:3.30.70.580 1 82 7.2E-16 T 28-03-2018 APY29_RS21740 550cd6978990a5665919f58abfe9753c 190 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 6 176 6.5E-53 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APY29_RS21740 550cd6978990a5665919f58abfe9753c 190 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 39 53 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APY29_RS19160 c3f2bd7d19b02153765ae74cc46901e5 715 Pfam PF00582 Universal stress protein family 249 361 4.4E-6 T 28-03-2018 IPR006016 UspA GO:0006950 APY29_RS19160 c3f2bd7d19b02153765ae74cc46901e5 715 Gene3D G3DSA:1.10.287.130 646 715 2.0E-13 T 28-03-2018 APY29_RS19160 c3f2bd7d19b02153765ae74cc46901e5 715 Pfam PF00512 His Kinase A (phospho-acceptor) domain 653 714 1.9E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS19160 c3f2bd7d19b02153765ae74cc46901e5 715 Gene3D G3DSA:1.20.120.620 395 494 5.9E-23 T 28-03-2018 APY29_RS19160 c3f2bd7d19b02153765ae74cc46901e5 715 SUPERFAMILY SSF47384 648 714 2.94E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS19160 c3f2bd7d19b02153765ae74cc46901e5 715 Gene3D G3DSA:3.40.50.620 227 372 3.2E-16 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS19160 c3f2bd7d19b02153765ae74cc46901e5 715 Gene3D G3DSA:3.40.50.300 20 147 6.2E-21 T 28-03-2018 APY29_RS19160 c3f2bd7d19b02153765ae74cc46901e5 715 SUPERFAMILY SSF52540 21 223 8.88E-7 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS19160 c3f2bd7d19b02153765ae74cc46901e5 715 SUPERFAMILY SSF52402 250 362 2.01E-12 T 28-03-2018 APY29_RS19160 c3f2bd7d19b02153765ae74cc46901e5 715 Pfam PF13493 Domain of unknown function (DUF4118) 397 498 6.3E-23 T 28-03-2018 IPR025201 Sensor protein KdpD, transmembrane domain APY29_RS19160 c3f2bd7d19b02153765ae74cc46901e5 715 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 229 1.0E-93 T 28-03-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 APY29_RS19160 c3f2bd7d19b02153765ae74cc46901e5 715 SMART SM00388 652 715 6.2E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS01115 368bd368b4eb875159f8564ceeee6ad9 433 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 19 422 6.8E-137 T 28-03-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 APY29_RS01115 368bd368b4eb875159f8564ceeee6ad9 433 Gene3D G3DSA:1.20.1250.20 19 233 1.1E-21 T 28-03-2018 APY29_RS01115 368bd368b4eb875159f8564ceeee6ad9 433 SUPERFAMILY SSF103473 11 425 5.89E-41 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS01115 368bd368b4eb875159f8564ceeee6ad9 433 Pfam PF07690 Major Facilitator Superfamily 28 376 5.9E-22 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS01115 368bd368b4eb875159f8564ceeee6ad9 433 Gene3D G3DSA:1.20.1250.20 238 427 7.0E-21 T 28-03-2018 APY29_RS10430 70bd079ee0a77f35f32d25278b0cc192 578 Gene3D G3DSA:1.20.1560.10 18 343 8.6E-26 T 28-03-2018 APY29_RS10430 70bd079ee0a77f35f32d25278b0cc192 578 SUPERFAMILY SSF52540 373 571 3.48E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS10430 70bd079ee0a77f35f32d25278b0cc192 578 SUPERFAMILY SSF90123 37 343 5.23E-39 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS10430 70bd079ee0a77f35f32d25278b0cc192 578 Pfam PF00005 ABC transporter 389 526 7.6E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS10430 70bd079ee0a77f35f32d25278b0cc192 578 Gene3D G3DSA:3.40.50.300 357 577 7.3E-54 T 28-03-2018 APY29_RS10430 70bd079ee0a77f35f32d25278b0cc192 578 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 41 568 1.4E-150 T 28-03-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 APY29_RS10430 70bd079ee0a77f35f32d25278b0cc192 578 ProSitePatterns PS00211 ABC transporters family signature. 498 512 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS10430 70bd079ee0a77f35f32d25278b0cc192 578 SMART SM00382 397 572 5.8E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS10430 70bd079ee0a77f35f32d25278b0cc192 578 Pfam PF00664 ABC transporter transmembrane region 44 288 9.0E-18 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS15880 3f5864b8db575648ecad6d238e43de5e 431 SUPERFAMILY SSF53335 53 369 3.31E-73 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS15880 3f5864b8db575648ecad6d238e43de5e 431 Pfam PF02353 Mycolic acid cyclopropane synthetase 138 406 5.1E-77 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS15880 3f5864b8db575648ecad6d238e43de5e 431 Gene3D G3DSA:3.40.50.150 131 415 3.6E-58 T 28-03-2018 APY29_RS15880 3f5864b8db575648ecad6d238e43de5e 431 PIRSF PIRSF003085 17 428 6.5E-115 T 28-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 APY29_RS02175 20620f3d50636ad789467af9ab44692a 69 Gene3D G3DSA:1.10.1470.10 1 69 1.2E-18 T 28-03-2018 IPR008462 CsbD-like domain APY29_RS02175 20620f3d50636ad789467af9ab44692a 69 Pfam PF05532 CsbD-like 4 55 2.2E-19 T 28-03-2018 IPR008462 CsbD-like domain APY29_RS02175 20620f3d50636ad789467af9ab44692a 69 SUPERFAMILY SSF69047 1 66 8.89E-24 T 28-03-2018 IPR008462 CsbD-like domain APY29_RS02175 20620f3d50636ad789467af9ab44692a 69 PIRSF PIRSF039008 1 66 1.7E-30 T 28-03-2018 IPR026042 Stress response protein YjbJ APY29_RS19415 61a74e80ea45dcd63fc4b52079183ed8 355 SMART SM00354 3 73 3.6E-25 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS19415 61a74e80ea45dcd63fc4b52079183ed8 355 SUPERFAMILY SSF53822 64 344 1.69E-63 T 28-03-2018 IPR028082 Periplasmic binding protein-like I APY29_RS19415 61a74e80ea45dcd63fc4b52079183ed8 355 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 5.5E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS19415 61a74e80ea45dcd63fc4b52079183ed8 355 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 5.5E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS19415 61a74e80ea45dcd63fc4b52079183ed8 355 SUPERFAMILY SSF47413 2 59 4.57E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APY29_RS19415 61a74e80ea45dcd63fc4b52079183ed8 355 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 28-03-2018 APY29_RS19415 61a74e80ea45dcd63fc4b52079183ed8 355 Gene3D G3DSA:3.40.50.2300 182 311 6.0E-42 T 28-03-2018 APY29_RS19415 61a74e80ea45dcd63fc4b52079183ed8 355 Pfam PF13377 Periplasmic binding protein-like domain 173 339 1.5E-34 T 28-03-2018 APY29_RS19415 61a74e80ea45dcd63fc4b52079183ed8 355 Gene3D G3DSA:3.40.50.2300 55 181 4.5E-23 T 28-03-2018 APY29_RS19415 61a74e80ea45dcd63fc4b52079183ed8 355 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 4.3E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS19415 61a74e80ea45dcd63fc4b52079183ed8 355 Gene3D G3DSA:1.10.260.40 5 54 5.0E-22 T 28-03-2018 APY29_RS15630 0a49150e7fbc487fb03dc15606d1c3a6 783 Pfam PF00577 Outer membrane usher protein 473 692 1.4E-16 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APY29_RS15630 0a49150e7fbc487fb03dc15606d1c3a6 783 Pfam PF00577 Outer membrane usher protein 196 362 1.1E-11 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APY29_RS15630 0a49150e7fbc487fb03dc15606d1c3a6 783 Pfam PF13953 PapC C-terminal domain 702 762 7.3E-12 T 28-03-2018 IPR025949 PapC-like, C-terminal domain APY29_RS10920 3306ae74fded9b3bbbec304faa1d9991 162 Gene3D G3DSA:3.90.79.10 6 158 8.0E-24 T 28-03-2018 APY29_RS10920 3306ae74fded9b3bbbec304faa1d9991 162 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APY29_RS10920 3306ae74fded9b3bbbec304faa1d9991 162 PRINTS PR01402 Mutator MutX protein signature 27 42 2.9E-10 T 28-03-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 APY29_RS10920 3306ae74fded9b3bbbec304faa1d9991 162 PRINTS PR01402 Mutator MutX protein signature 105 125 2.9E-10 T 28-03-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 APY29_RS10920 3306ae74fded9b3bbbec304faa1d9991 162 PRINTS PR01402 Mutator MutX protein signature 125 142 2.9E-10 T 28-03-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 APY29_RS10920 3306ae74fded9b3bbbec304faa1d9991 162 PRINTS PR01402 Mutator MutX protein signature 9 27 2.9E-10 T 28-03-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 APY29_RS10920 3306ae74fded9b3bbbec304faa1d9991 162 PRINTS PR01402 Mutator MutX protein signature 74 100 2.9E-10 T 28-03-2018 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 APY29_RS10920 3306ae74fded9b3bbbec304faa1d9991 162 Pfam PF00293 NUDIX domain 12 134 1.3E-15 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 APY29_RS10920 3306ae74fded9b3bbbec304faa1d9991 162 SUPERFAMILY SSF55811 3 151 1.76E-25 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 APY29_RS03665 dec7ea6907eec922c764636a2110e152 429 Pfam PF01266 FAD dependent oxidoreductase 3 398 8.8E-73 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APY29_RS03665 dec7ea6907eec922c764636a2110e152 429 Gene3D G3DSA:3.50.50.60 1 428 1.0E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS03665 dec7ea6907eec922c764636a2110e152 429 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 49.143 T 28-03-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 APY29_RS03665 dec7ea6907eec922c764636a2110e152 429 SUPERFAMILY SSF54373 270 360 1.09E-18 T 28-03-2018 APY29_RS03665 dec7ea6907eec922c764636a2110e152 429 SUPERFAMILY SSF51905 1 54 1.14E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS03665 dec7ea6907eec922c764636a2110e152 429 SUPERFAMILY SSF51905 360 419 1.14E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS03665 dec7ea6907eec922c764636a2110e152 429 SUPERFAMILY SSF51905 107 270 1.14E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS17520 44ca8210c3246da9b3c8f7466f77d3fa 249 SUPERFAMILY SSF56112 46 201 2.16E-16 T 28-03-2018 IPR011009 Protein kinase-like domain APY29_RS17520 44ca8210c3246da9b3c8f7466f77d3fa 249 Gene3D G3DSA:1.10.510.10 91 246 1.5E-13 T 28-03-2018 APY29_RS17520 44ca8210c3246da9b3c8f7466f77d3fa 249 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 40 241 2.9E-68 T 28-03-2018 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 APY29_RS17520 44ca8210c3246da9b3c8f7466f77d3fa 249 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 10 243 38.683 T 28-03-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 APY29_RS01325 48c5e6fc9d5a39e37563f3491094c499 435 Gene3D G3DSA:3.40.190.10 195 284 4.9E-23 T 28-03-2018 APY29_RS01325 48c5e6fc9d5a39e37563f3491094c499 435 SUPERFAMILY SSF46785 7 85 2.48E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS01325 48c5e6fc9d5a39e37563f3491094c499 435 Pfam PF03466 LysR substrate binding domain 190 398 1.8E-32 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS01325 48c5e6fc9d5a39e37563f3491094c499 435 Gene3D G3DSA:1.10.10.10 3 84 2.4E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS01325 48c5e6fc9d5a39e37563f3491094c499 435 SUPERFAMILY SSF46785 102 214 3.33E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS01325 48c5e6fc9d5a39e37563f3491094c499 435 Gene3D G3DSA:3.40.190.10 285 363 4.7E-13 T 28-03-2018 APY29_RS01325 48c5e6fc9d5a39e37563f3491094c499 435 Gene3D G3DSA:1.10.10.10 104 194 1.0E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS01325 48c5e6fc9d5a39e37563f3491094c499 435 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 5.9E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS01325 48c5e6fc9d5a39e37563f3491094c499 435 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 5.9E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS01325 48c5e6fc9d5a39e37563f3491094c499 435 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 5.9E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS01325 48c5e6fc9d5a39e37563f3491094c499 435 SUPERFAMILY SSF53850 191 402 6.25E-38 T 28-03-2018 APY29_RS01325 48c5e6fc9d5a39e37563f3491094c499 435 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 5.3E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS01325 48c5e6fc9d5a39e37563f3491094c499 435 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 107 163 1.1E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS14870 c827b61f6be534939591201aad737038 522 Pfam PF00916 Sulfate permease family 16 383 1.0E-55 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 APY29_RS14870 c827b61f6be534939591201aad737038 522 Gene3D G3DSA:3.30.750.24 412 493 3.8E-6 T 28-03-2018 IPR002645 STAS domain APY29_RS13380 065a9c85b999f619c799fd2625ee7958 265 Gene3D G3DSA:3.90.226.10 1 203 1.2E-46 T 28-03-2018 APY29_RS13380 065a9c85b999f619c799fd2625ee7958 265 Gene3D G3DSA:1.10.12.10 204 263 1.1E-10 T 28-03-2018 IPR014748 Crontonase, C-terminal APY29_RS13380 065a9c85b999f619c799fd2625ee7958 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 259 1.2E-45 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APY29_RS13380 065a9c85b999f619c799fd2625ee7958 265 SUPERFAMILY SSF52096 5 259 8.06E-65 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS00200 941b943c1ec055f6821a0c2ac1b1a2d4 147 Pfam PF13670 Peptidase propeptide and YPEB domain 88 144 2.1E-9 T 28-03-2018 IPR025711 PepSY domain APY29_RS00200 941b943c1ec055f6821a0c2ac1b1a2d4 147 Pfam PF13670 Peptidase propeptide and YPEB domain 9 84 2.6E-12 T 28-03-2018 IPR025711 PepSY domain APY29_RS00200 941b943c1ec055f6821a0c2ac1b1a2d4 147 Gene3D G3DSA:3.10.450.40 20 89 0.025 T 28-03-2018 APY29_RS11685 4fe5057797da4a8bdf0f503db236348b 70 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 12 62 3.1E-25 T 28-03-2018 IPR010260 DNA-binding transcriptional activator AlpA APY29_RS01025 0c7392e3381484f031461d3682db6cfe 232 PIRSF PIRSF009320 16 231 1.8E-36 T 28-03-2018 APY29_RS01025 0c7392e3381484f031461d3682db6cfe 232 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 19 206 1.1E-12 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain APY29_RS01025 0c7392e3381484f031461d3682db6cfe 232 Gene3D G3DSA:3.40.50.300 17 230 5.5E-30 T 28-03-2018 APY29_RS01025 0c7392e3381484f031461d3682db6cfe 232 SUPERFAMILY SSF52540 18 230 5.41E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS22345 0b23657454143537e3f3893f51678268 335 Pfam PF01987 Mitochondrial biogenesis AIM24 74 294 6.4E-64 T 28-03-2018 IPR002838 Mitochondrial biogenesis protein AIM24 APY29_RS22345 0b23657454143537e3f3893f51678268 335 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 73 295 7.3E-29 T 28-03-2018 IPR002838 Mitochondrial biogenesis protein AIM24 APY29_RS22345 0b23657454143537e3f3893f51678268 335 SUPERFAMILY SSF51219 72 314 4.45E-79 T 28-03-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain APY29_RS22345 0b23657454143537e3f3893f51678268 335 Gene3D G3DSA:3.60.160.10 65 320 2.9E-74 T 28-03-2018 IPR002838 Mitochondrial biogenesis protein AIM24 APY29_RS22355 1ec66383880ee2d6e58151b3b6ef5077 733 SUPERFAMILY SSF56935 32 733 1.15E-110 T 28-03-2018 APY29_RS22355 1ec66383880ee2d6e58151b3b6ef5077 733 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 67 730 2.8E-86 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APY29_RS22355 1ec66383880ee2d6e58151b3b6ef5077 733 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 159 1.6E-11 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS22355 1ec66383880ee2d6e58151b3b6ef5077 733 Pfam PF00593 TonB dependent receptor 250 732 3.6E-41 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS22355 1ec66383880ee2d6e58151b3b6ef5077 733 Gene3D G3DSA:2.40.170.20 171 733 3.4E-70 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS22355 1ec66383880ee2d6e58151b3b6ef5077 733 Gene3D G3DSA:2.170.130.10 32 170 2.8E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS19015 bc25717d335052d744b7ce871a1401d7 303 SUPERFAMILY SSF54211 3 125 2.43E-42 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS19015 bc25717d335052d744b7ce871a1401d7 303 Gene3D G3DSA:3.30.1700.10 128 299 2.3E-64 T 28-03-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 APY29_RS19015 bc25717d335052d744b7ce871a1401d7 303 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 5.3E-105 T 28-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 APY29_RS19015 bc25717d335052d744b7ce871a1401d7 303 SUPERFAMILY SSF54211 133 277 5.61E-51 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS19015 bc25717d335052d744b7ce871a1401d7 303 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3 294 6.5E-118 T 28-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 APY29_RS19015 bc25717d335052d744b7ce871a1401d7 303 Gene3D G3DSA:3.30.230.20 1 127 6.0E-49 T 28-03-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 APY29_RS19015 bc25717d335052d744b7ce871a1401d7 303 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 45.964 T 28-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 APY29_RS15655 037804130ccc3965e9e16a8d8734b2f3 292 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 28-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 APY29_RS15655 037804130ccc3965e9e16a8d8734b2f3 292 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 28-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 APY29_RS15655 037804130ccc3965e9e16a8d8734b2f3 292 SUPERFAMILY SSF46934 1 55 2.01E-19 T 28-03-2018 IPR009060 UBA-like GO:0005515 APY29_RS15655 037804130ccc3965e9e16a8d8734b2f3 292 Gene3D G3DSA:3.30.479.20 57 154 8.9E-19 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 APY29_RS15655 037804130ccc3965e9e16a8d8734b2f3 292 Hamap MF_00050 Elongation factor Ts [tsf]. 1 289 74.776 T 28-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 APY29_RS15655 037804130ccc3965e9e16a8d8734b2f3 292 SUPERFAMILY SSF54713 149 289 3.79E-46 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 APY29_RS15655 037804130ccc3965e9e16a8d8734b2f3 292 Pfam PF00889 Elongation factor TS 70 272 4.4E-65 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 APY29_RS15655 037804130ccc3965e9e16a8d8734b2f3 292 Gene3D G3DSA:1.10.8.10 1 55 2.4E-24 T 28-03-2018 APY29_RS15655 037804130ccc3965e9e16a8d8734b2f3 292 SUPERFAMILY SSF54713 55 144 7.03E-20 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 APY29_RS15655 037804130ccc3965e9e16a8d8734b2f3 292 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 289 2.2E-99 T 28-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 APY29_RS15655 037804130ccc3965e9e16a8d8734b2f3 292 Gene3D G3DSA:3.30.479.20 155 288 1.2E-42 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 APY29_RS18865 eba4b14f61fa1a82b93b11cd2534cb65 536 Gene3D G3DSA:3.40.50.1240 150 535 2.3E-42 T 28-03-2018 IPR029033 Histidine phosphatase superfamily APY29_RS18865 eba4b14f61fa1a82b93b11cd2534cb65 536 SUPERFAMILY SSF53254 154 530 1.25E-57 T 28-03-2018 IPR029033 Histidine phosphatase superfamily APY29_RS18865 eba4b14f61fa1a82b93b11cd2534cb65 536 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 158 172 - T 28-03-2018 IPR033379 Histidine acid phosphatase active site APY29_RS18865 eba4b14f61fa1a82b93b11cd2534cb65 536 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 157 262 6.5E-9 T 28-03-2018 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 APY29_RS12105 063777443c694f895965dcb7ec644483 169 Pfam PF05974 Domain of unknown function (DUF892) 4 156 2.5E-49 T 28-03-2018 IPR010287 Domain of unknown function DUF892 APY29_RS12105 063777443c694f895965dcb7ec644483 169 Gene3D G3DSA:1.20.1260.10 1 169 1.3E-37 T 28-03-2018 IPR012347 Ferritin-related APY29_RS12105 063777443c694f895965dcb7ec644483 169 SUPERFAMILY SSF47240 1 156 1.1E-46 T 28-03-2018 IPR009078 Ferritin-like superfamily APY29_RS11935 880c3300aa438c04d9db82cba7a68347 38 Pfam PF17091 Inovirus G7P protein 1 38 8.8E-28 T 28-03-2018 IPR031377 Inovirus G7P protein APY29_RS07690 b4d5e1cec88c4950575e043aea4c19d3 416 Pfam PF05684 Protein of unknown function (DUF819) 17 412 2.5E-143 T 28-03-2018 IPR008537 Protein of unknown function DUF819 APY29_RS11735 959c2c04688bcf2b4fc6cb7430612c1d 1344 Gene3D G3DSA:3.40.50.300 935 1196 2.8E-10 T 28-03-2018 APY29_RS11735 959c2c04688bcf2b4fc6cb7430612c1d 1344 Pfam PF00271 Helicase conserved C-terminal domain 1106 1149 7.9E-5 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS11735 959c2c04688bcf2b4fc6cb7430612c1d 1344 SUPERFAMILY SSF52540 622 685 1.58E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11735 959c2c04688bcf2b4fc6cb7430612c1d 1344 SUPERFAMILY SSF52540 1070 1192 1.58E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11735 959c2c04688bcf2b4fc6cb7430612c1d 1344 SMART SM00490 1078 1151 0.0079 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS11735 959c2c04688bcf2b4fc6cb7430612c1d 1344 Gene3D G3DSA:3.40.50.300 483 934 7.5E-9 T 28-03-2018 APY29_RS12050 c6b13c71f5fef5fee0b36e137dfc9e3a 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 56 369 1.0E-53 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 APY29_RS12050 c6b13c71f5fef5fee0b36e137dfc9e3a 371 Gene3D G3DSA:1.20.1600.10 111 309 2.0E-19 T 28-03-2018 APY29_RS12050 c6b13c71f5fef5fee0b36e137dfc9e3a 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 297 8.1E-44 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APY29_RS12050 c6b13c71f5fef5fee0b36e137dfc9e3a 371 SUPERFAMILY SSF111369 78 301 6.54E-25 T 28-03-2018 APY29_RS09085 55ccd128ecd4d834c5f3f7fd9bd4745a 492 Gene3D G3DSA:1.20.1250.20 6 217 3.8E-24 T 28-03-2018 APY29_RS09085 55ccd128ecd4d834c5f3f7fd9bd4745a 492 SUPERFAMILY SSF103473 232 486 6.15E-15 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS09085 55ccd128ecd4d834c5f3f7fd9bd4745a 492 Gene3D G3DSA:1.20.1250.20 295 488 7.5E-19 T 28-03-2018 APY29_RS09085 55ccd128ecd4d834c5f3f7fd9bd4745a 492 SUPERFAMILY SSF103473 10 208 8.11E-22 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS09085 55ccd128ecd4d834c5f3f7fd9bd4745a 492 Pfam PF07690 Major Facilitator Superfamily 16 448 8.3E-16 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS15355 9723c4a82e6be16dd3e676d97d950eaf 484 Gene3D G3DSA:3.40.50.620 11 140 3.3E-35 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS15355 9723c4a82e6be16dd3e676d97d950eaf 484 Pfam PF00875 DNA photolyase 16 175 5.1E-51 T 28-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 APY29_RS15355 9723c4a82e6be16dd3e676d97d950eaf 484 SUPERFAMILY SSF52425 15 218 6.28E-57 T 28-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 APY29_RS15355 9723c4a82e6be16dd3e676d97d950eaf 484 SUPERFAMILY SSF48173 204 483 9.81E-100 T 28-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 APY29_RS15355 9723c4a82e6be16dd3e676d97d950eaf 484 Gene3D G3DSA:1.25.40.80 141 303 5.3E-43 T 28-03-2018 APY29_RS15355 9723c4a82e6be16dd3e676d97d950eaf 484 Pfam PF03441 FAD binding domain of DNA photolyase 284 480 5.7E-78 T 28-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 APY29_RS15355 9723c4a82e6be16dd3e676d97d950eaf 484 Gene3D G3DSA:1.10.579.10 304 484 2.0E-70 T 28-03-2018 APY29_RS15355 9723c4a82e6be16dd3e676d97d950eaf 484 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 334 346 - T 28-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal APY29_RS15355 9723c4a82e6be16dd3e676d97d950eaf 484 PRINTS PR00147 DNA photolyase signature 393 407 5.8E-23 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 APY29_RS15355 9723c4a82e6be16dd3e676d97d950eaf 484 PRINTS PR00147 DNA photolyase signature 334 350 5.8E-23 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 APY29_RS15355 9723c4a82e6be16dd3e676d97d950eaf 484 PRINTS PR00147 DNA photolyase signature 152 168 5.8E-23 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 APY29_RS15355 9723c4a82e6be16dd3e676d97d950eaf 484 PRINTS PR00147 DNA photolyase signature 354 372 5.8E-23 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 APY29_RS14025 ab9d3902b52e44e0530c261d5737eb11 648 SMART SM00382 199 338 1.6E-26 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS14025 ab9d3902b52e44e0530c261d5737eb11 648 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 8 629 37.547 T 28-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 APY29_RS14025 ab9d3902b52e44e0530c261d5737eb11 648 Pfam PF06480 FtsH Extracellular 10 102 5.2E-10 T 28-03-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 APY29_RS14025 ab9d3902b52e44e0530c261d5737eb11 648 Gene3D G3DSA:3.40.50.300 143 346 2.7E-63 T 28-03-2018 APY29_RS14025 ab9d3902b52e44e0530c261d5737eb11 648 SUPERFAMILY SSF140990 418 617 2.35E-76 T 28-03-2018 APY29_RS14025 ab9d3902b52e44e0530c261d5737eb11 648 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 3.9E-46 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APY29_RS14025 ab9d3902b52e44e0530c261d5737eb11 648 SUPERFAMILY SSF52540 161 406 1.66E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS14025 ab9d3902b52e44e0530c261d5737eb11 648 ProSitePatterns PS00674 AAA-protein family signature. 306 324 - T 28-03-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 APY29_RS14025 ab9d3902b52e44e0530c261d5737eb11 648 Gene3D G3DSA:1.10.8.60 347 429 7.0E-25 T 28-03-2018 APY29_RS14025 ab9d3902b52e44e0530c261d5737eb11 648 Pfam PF01434 Peptidase family M41 397 606 6.0E-82 T 28-03-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 APY29_RS14025 ab9d3902b52e44e0530c261d5737eb11 648 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 114 608 1.4E-240 T 28-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 APY29_RS04690 3b3f6c3c7372e67525b150cdf3a3c503 308 SUPERFAMILY SSF52833 8 104 8.59E-31 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS04690 3b3f6c3c7372e67525b150cdf3a3c503 308 SUPERFAMILY SSF89360 114 201 6.87E-11 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 APY29_RS04690 3b3f6c3c7372e67525b150cdf3a3c503 308 Pfam PF00581 Rhodanese-like domain 211 299 5.9E-8 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS04690 3b3f6c3c7372e67525b150cdf3a3c503 308 Pfam PF00462 Glutaredoxin 20 84 3.9E-19 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APY29_RS04690 3b3f6c3c7372e67525b150cdf3a3c503 308 Gene3D G3DSA:3.40.30.10 6 109 2.2E-28 T 28-03-2018 APY29_RS04690 3b3f6c3c7372e67525b150cdf3a3c503 308 Gene3D G3DSA:3.40.250.10 204 305 4.0E-18 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS04690 3b3f6c3c7372e67525b150cdf3a3c503 308 SMART SM00450 208 303 1.0E-12 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS04690 3b3f6c3c7372e67525b150cdf3a3c503 308 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 9 103 1.5E-39 T 28-03-2018 IPR004480 Monothiol glutaredoxin-related APY29_RS04690 3b3f6c3c7372e67525b150cdf3a3c503 308 Gene3D G3DSA:2.60.300.12 110 203 1.3E-9 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 APY29_RS04690 3b3f6c3c7372e67525b150cdf3a3c503 308 SUPERFAMILY SSF52821 201 302 3.01E-21 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS10330 30ba093e61a62e429e2ea47c0b15554c 476 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 5 475 3.2E-148 T 28-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 APY29_RS10330 30ba093e61a62e429e2ea47c0b15554c 476 Pfam PF09190 DALR domain 350 419 3.3E-10 T 28-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 APY29_RS10330 30ba093e61a62e429e2ea47c0b15554c 476 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 20 317 5.2E-113 T 28-03-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 APY29_RS10330 30ba093e61a62e429e2ea47c0b15554c 476 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 64 73 7.7E-29 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APY29_RS10330 30ba093e61a62e429e2ea47c0b15554c 476 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 193 211 7.7E-29 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APY29_RS10330 30ba093e61a62e429e2ea47c0b15554c 476 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 28 39 7.7E-29 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APY29_RS10330 30ba093e61a62e429e2ea47c0b15554c 476 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 224 245 7.7E-29 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APY29_RS10330 30ba093e61a62e429e2ea47c0b15554c 476 SUPERFAMILY SSF47323 319 475 2.22E-30 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS10330 30ba093e61a62e429e2ea47c0b15554c 476 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 5 476 37.004 T 28-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 APY29_RS10330 30ba093e61a62e429e2ea47c0b15554c 476 Gene3D G3DSA:1.20.120.640 309 411 1.9E-12 T 28-03-2018 APY29_RS10330 30ba093e61a62e429e2ea47c0b15554c 476 SUPERFAMILY SSF52374 6 317 9.12E-89 T 28-03-2018 APY29_RS10330 30ba093e61a62e429e2ea47c0b15554c 476 Gene3D G3DSA:3.40.50.620 2 308 2.1E-83 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS10330 30ba093e61a62e429e2ea47c0b15554c 476 SMART SM00840 349 419 2.9E-12 T 28-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 APY29_RS20880 3c2337c990d6fcae5b1ce644c83092ed 362 SUPERFAMILY SSF52518 6 356 2.86E-86 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold APY29_RS20880 3c2337c990d6fcae5b1ce644c83092ed 362 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 11 353 1.8E-129 T 28-03-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 APY29_RS20880 3c2337c990d6fcae5b1ce644c83092ed 362 Pfam PF00676 Dehydrogenase E1 component 41 330 5.6E-68 T 28-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 APY29_RS20880 3c2337c990d6fcae5b1ce644c83092ed 362 Gene3D G3DSA:3.40.50.970 1 354 1.3E-73 T 28-03-2018 APY29_RS05170 f57247f15b07bd84080d733f8b40047f 607 Pfam PF13620 Carboxypeptidase regulatory-like domain 28 102 1.5E-8 T 28-03-2018 APY29_RS05170 f57247f15b07bd84080d733f8b40047f 607 Pfam PF07715 TonB-dependent Receptor Plug Domain 132 235 7.7E-10 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS05170 f57247f15b07bd84080d733f8b40047f 607 Gene3D G3DSA:2.170.130.10 115 247 2.0E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS05170 f57247f15b07bd84080d733f8b40047f 607 Gene3D G3DSA:2.40.170.20 289 607 9.5E-21 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS05170 f57247f15b07bd84080d733f8b40047f 607 Gene3D G3DSA:2.60.40.1120 26 114 1.8E-7 T 28-03-2018 APY29_RS05170 f57247f15b07bd84080d733f8b40047f 607 SUPERFAMILY SSF56935 105 255 4.07E-46 T 28-03-2018 APY29_RS05170 f57247f15b07bd84080d733f8b40047f 607 SUPERFAMILY SSF56935 554 606 4.07E-46 T 28-03-2018 APY29_RS05170 f57247f15b07bd84080d733f8b40047f 607 SUPERFAMILY SSF56935 299 522 4.07E-46 T 28-03-2018 APY29_RS05170 f57247f15b07bd84080d733f8b40047f 607 SUPERFAMILY SSF49452 22 101 1.45E-7 T 28-03-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 APY29_RS19425 5df4d7a9a19eccac767c75b444978098 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 77 1.6E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS19425 5df4d7a9a19eccac767c75b444978098 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.2E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS19425 5df4d7a9a19eccac767c75b444978098 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.2E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS19425 5df4d7a9a19eccac767c75b444978098 240 SUPERFAMILY SSF46785 7 79 2.55E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS19425 5df4d7a9a19eccac767c75b444978098 240 Gene3D G3DSA:1.10.10.10 1 76 5.2E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS19425 5df4d7a9a19eccac767c75b444978098 240 Gene3D G3DSA:3.40.1410.10 77 240 1.3E-36 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APY29_RS19425 5df4d7a9a19eccac767c75b444978098 240 SUPERFAMILY SSF64288 65 240 3.14E-42 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APY29_RS19425 5df4d7a9a19eccac767c75b444978098 240 SMART SM00866 97 233 1.6E-27 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APY29_RS19425 5df4d7a9a19eccac767c75b444978098 240 Pfam PF07702 UTRA domain 99 232 2.0E-32 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APY29_RS19425 5df4d7a9a19eccac767c75b444978098 240 SMART SM00345 18 77 1.9E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS17385 62815764a3a30de5e6d08846ed83fcfd 411 SUPERFAMILY SSF53901 3 251 9.27E-77 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS17385 62815764a3a30de5e6d08846ed83fcfd 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 2.6E-38 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal APY29_RS17385 62815764a3a30de5e6d08846ed83fcfd 411 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site APY29_RS17385 62815764a3a30de5e6d08846ed83fcfd 411 SUPERFAMILY SSF53901 213 410 1.8E-73 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS17385 62815764a3a30de5e6d08846ed83fcfd 411 Gene3D G3DSA:3.40.47.10 5 259 1.4E-78 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS17385 62815764a3a30de5e6d08846ed83fcfd 411 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 409 1.0E-197 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 APY29_RS17385 62815764a3a30de5e6d08846ed83fcfd 411 Gene3D G3DSA:3.40.47.10 262 411 2.9E-51 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS17385 62815764a3a30de5e6d08846ed83fcfd 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 246 1.0E-58 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal APY29_RS17385 62815764a3a30de5e6d08846ed83fcfd 411 PIRSF PIRSF000447 1 411 1.2E-183 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 APY29_RS17385 62815764a3a30de5e6d08846ed83fcfd 411 SMART SM00825 Beta-ketoacyl synthase 5 411 1.3E-15 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APY29_RS21480 ff1426ef8e6b406fd14f47d3beed4164 318 TIGRFAM TIGR00793 kdgT: 2-keto-3-deoxygluconate transporter 1 312 1.4E-143 T 28-03-2018 IPR018395 2-keto-3-deoxygluconate permease, subgroup GO:0008643|GO:0015649|GO:0016021|GO:0046411 APY29_RS21480 ff1426ef8e6b406fd14f47d3beed4164 318 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 25 317 2.0E-100 T 28-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 APY29_RS21480 ff1426ef8e6b406fd14f47d3beed4164 318 Hamap MF_00070 2-keto-3-deoxygluconate permease [kdgT]. 1 318 36.009 T 28-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 APY29_RS21480 ff1426ef8e6b406fd14f47d3beed4164 318 Pfam PF03812 2-keto-3-deoxygluconate permease 3 312 1.7E-111 T 28-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 APY29_RS12530 d45a2e8c2c3a66ec004e24d121daad1e 401 SUPERFAMILY SSF53901 7 278 7.52E-75 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS12530 d45a2e8c2c3a66ec004e24d121daad1e 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 APY29_RS12530 d45a2e8c2c3a66ec004e24d121daad1e 401 PIRSF PIRSF000429 2 401 2.4E-128 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 APY29_RS12530 d45a2e8c2c3a66ec004e24d121daad1e 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 APY29_RS12530 d45a2e8c2c3a66ec004e24d121daad1e 401 Gene3D G3DSA:3.40.47.10 1 282 5.9E-55 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS12530 d45a2e8c2c3a66ec004e24d121daad1e 401 Gene3D G3DSA:3.40.47.10 283 398 2.1E-32 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS12530 d45a2e8c2c3a66ec004e24d121daad1e 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 399 4.7E-141 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 APY29_RS12530 d45a2e8c2c3a66ec004e24d121daad1e 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 APY29_RS12530 d45a2e8c2c3a66ec004e24d121daad1e 401 Pfam PF02803 Thiolase, C-terminal domain 278 399 1.9E-45 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 APY29_RS12530 d45a2e8c2c3a66ec004e24d121daad1e 401 Pfam PF00108 Thiolase, N-terminal domain 9 271 3.7E-74 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 APY29_RS12530 d45a2e8c2c3a66ec004e24d121daad1e 401 SUPERFAMILY SSF53901 279 399 3.62E-43 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS04270 b52d31b63da6b098cc63dd93586c9672 243 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 27 42 - T 28-03-2018 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 Reactome: R-HSA-77108 APY29_RS04270 b52d31b63da6b098cc63dd93586c9672 243 Pfam PF01144 Coenzyme A transferase 16 225 1.2E-79 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 APY29_RS04270 b52d31b63da6b098cc63dd93586c9672 243 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 12 225 2.4E-79 T 28-03-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 APY29_RS04270 b52d31b63da6b098cc63dd93586c9672 243 Gene3D G3DSA:3.40.1080.10 2 243 7.1E-97 T 28-03-2018 APY29_RS04270 b52d31b63da6b098cc63dd93586c9672 243 SUPERFAMILY SSF100950 16 236 6.07E-87 T 28-03-2018 APY29_RS04270 b52d31b63da6b098cc63dd93586c9672 243 SMART SM00882 14 226 1.8E-92 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 APY29_RS18325 962321bf635420fc20bff3bd48c018cb 285 Pfam PF12146 Serine aminopeptidase, S33 80 213 6.9E-12 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 APY29_RS18325 962321bf635420fc20bff3bd48c018cb 285 SUPERFAMILY SSF53474 54 275 1.34E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS18325 962321bf635420fc20bff3bd48c018cb 285 Gene3D G3DSA:3.40.50.1820 53 282 2.4E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS12245 62e9331c45fb182d1a6c8b9e4af0cd18 351 Gene3D G3DSA:1.20.120.330 63 211 6.5E-5 T 28-03-2018 APY29_RS12245 62e9331c45fb182d1a6c8b9e4af0cd18 351 Gene3D G3DSA:1.20.5.730 212 279 0.17 T 28-03-2018 APY29_RS12245 62e9331c45fb182d1a6c8b9e4af0cd18 351 Pfam PF11740 Plasmid replication region DNA-binding N-term 8 118 3.0E-23 T 28-03-2018 IPR021104 KfrA, N-terminal DNA-binding domain APY29_RS23775 62e9331c45fb182d1a6c8b9e4af0cd18 351 Gene3D G3DSA:1.20.120.330 63 211 6.5E-5 T 28-03-2018 APY29_RS23775 62e9331c45fb182d1a6c8b9e4af0cd18 351 Gene3D G3DSA:1.20.5.730 212 279 0.17 T 28-03-2018 APY29_RS23775 62e9331c45fb182d1a6c8b9e4af0cd18 351 Pfam PF11740 Plasmid replication region DNA-binding N-term 8 118 3.0E-23 T 28-03-2018 IPR021104 KfrA, N-terminal DNA-binding domain APY29_RS04900 a1e771ecf70bcfca55dffe98c7b2ab7a 769 Gene3D G3DSA:3.40.50.10380 6 161 4.7E-33 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APY29_RS04900 a1e771ecf70bcfca55dffe98c7b2ab7a 769 SMART SM01274 19 152 8.8E-75 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APY29_RS04900 a1e771ecf70bcfca55dffe98c7b2ab7a 769 Gene3D G3DSA:3.40.50.10750 571 724 5.4E-46 T 28-03-2018 APY29_RS04900 a1e771ecf70bcfca55dffe98c7b2ab7a 769 SUPERFAMILY SSF51735 164 451 5.26E-84 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS04900 a1e771ecf70bcfca55dffe98c7b2ab7a 769 Pfam PF00390 Malic enzyme, N-terminal domain 20 152 3.0E-26 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APY29_RS04900 a1e771ecf70bcfca55dffe98c7b2ab7a 769 SUPERFAMILY SSF53659 428 751 5.35E-86 T 28-03-2018 APY29_RS04900 a1e771ecf70bcfca55dffe98c7b2ab7a 769 Gene3D G3DSA:3.40.50.720 162 446 6.4E-83 T 28-03-2018 APY29_RS04900 a1e771ecf70bcfca55dffe98c7b2ab7a 769 Pfam PF01515 Phosphate acetyl/butaryl transferase 428 748 1.4E-90 T 28-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 APY29_RS04900 a1e771ecf70bcfca55dffe98c7b2ab7a 769 SUPERFAMILY SSF53223 11 162 5.76E-51 T 28-03-2018 APY29_RS04900 a1e771ecf70bcfca55dffe98c7b2ab7a 769 Pfam PF03949 Malic enzyme, NAD binding domain 166 360 1.8E-20 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 APY29_RS04900 a1e771ecf70bcfca55dffe98c7b2ab7a 769 SMART SM00919 164 399 6.9E-129 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 APY29_RS04900 a1e771ecf70bcfca55dffe98c7b2ab7a 769 PIRSF PIRSF036684 1 756 0.0 T 28-03-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 APY29_RS22965 23ba8ba354b0bad958e60c529f685f06 720 Pfam PF01471 Putative peptidoglycan binding domain 342 397 3.2E-9 T 28-03-2018 IPR002477 Peptidoglycan binding-like APY29_RS22965 23ba8ba354b0bad958e60c529f685f06 720 SUPERFAMILY SSF53955 10 326 8.62E-95 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS22965 23ba8ba354b0bad958e60c529f685f06 720 SUPERFAMILY SSF47090 328 398 2.43E-14 T 28-03-2018 IPR002477 Peptidoglycan binding-like APY29_RS22965 23ba8ba354b0bad958e60c529f685f06 720 Pfam PF13406 Transglycosylase SLT domain 25 320 6.5E-100 T 28-03-2018 IPR031304 Transglycosylase SLT domain 2 APY29_RS22965 23ba8ba354b0bad958e60c529f685f06 720 Gene3D G3DSA:2.70.98.10 419 720 3.0E-62 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 APY29_RS22965 23ba8ba354b0bad958e60c529f685f06 720 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 24 323 1.9E-112 T 28-03-2018 IPR011970 Lytic murein transglycosylase APY29_RS22965 23ba8ba354b0bad958e60c529f685f06 720 Gene3D G3DSA:1.10.8.350 90 193 1.3E-29 T 28-03-2018 APY29_RS22965 23ba8ba354b0bad958e60c529f685f06 720 Gene3D G3DSA:1.10.530.10 198 326 8.6E-31 T 28-03-2018 APY29_RS22965 23ba8ba354b0bad958e60c529f685f06 720 Gene3D G3DSA:1.10.101.10 327 402 1.3E-11 T 28-03-2018 IPR002477 Peptidoglycan binding-like APY29_RS22965 23ba8ba354b0bad958e60c529f685f06 720 SUPERFAMILY SSF74650 440 717 1.26E-61 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APY29_RS22965 23ba8ba354b0bad958e60c529f685f06 720 Pfam PF01263 Aldose 1-epimerase 456 717 1.7E-40 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 APY29_RS06330 880e244aa82134345a976975bb879ead 194 SUPERFAMILY SSF50249 2 63 1.26E-16 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS06330 880e244aa82134345a976975bb879ead 194 Pfam PF14520 Helix-hairpin-helix domain 72 130 1.3E-17 T 28-03-2018 APY29_RS06330 880e244aa82134345a976975bb879ead 194 Pfam PF01330 RuvA N terminal domain 2 62 8.7E-18 T 28-03-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 APY29_RS06330 880e244aa82134345a976975bb879ead 194 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 193 6.7E-48 T 28-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 APY29_RS06330 880e244aa82134345a976975bb879ead 194 Gene3D G3DSA:2.40.50.140 2 66 2.8E-20 T 28-03-2018 APY29_RS06330 880e244aa82134345a976975bb879ead 194 SMART SM00278 108 127 0.089 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APY29_RS06330 880e244aa82134345a976975bb879ead 194 SMART SM00278 73 92 8.8 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APY29_RS06330 880e244aa82134345a976975bb879ead 194 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 193 29.643 T 28-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 APY29_RS06330 880e244aa82134345a976975bb879ead 194 Gene3D G3DSA:1.10.150.20 67 119 1.8E-13 T 28-03-2018 APY29_RS06330 880e244aa82134345a976975bb879ead 194 SUPERFAMILY SSF46929 147 191 1.57E-7 T 28-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 APY29_RS06330 880e244aa82134345a976975bb879ead 194 Pfam PF07499 RuvA, C-terminal domain 148 191 3.3E-8 T 28-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 APY29_RS06330 880e244aa82134345a976975bb879ead 194 Gene3D G3DSA:1.10.8.10 158 192 2.4E-8 T 28-03-2018 APY29_RS06330 880e244aa82134345a976975bb879ead 194 SUPERFAMILY SSF47781 66 134 1.33E-20 T 28-03-2018 IPR010994 RuvA domain 2-like APY29_RS06330 880e244aa82134345a976975bb879ead 194 Gene3D G3DSA:1.10.150.20 120 157 0.024 T 28-03-2018 APY29_RS16775 08564875845bcfce8731f9ad0695b4a1 400 Gene3D G3DSA:3.30.470.20 198 396 1.7E-40 T 28-03-2018 APY29_RS16775 08564875845bcfce8731f9ad0695b4a1 400 Pfam PF02222 ATP-grasp domain 124 295 8.4E-56 T 28-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type APY29_RS16775 08564875845bcfce8731f9ad0695b4a1 400 SUPERFAMILY SSF51246 325 396 1.73E-14 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 APY29_RS16775 08564875845bcfce8731f9ad0695b4a1 400 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 397 5.8E-176 T 28-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 APY29_RS16775 08564875845bcfce8731f9ad0695b4a1 400 SUPERFAMILY SSF56059 114 314 3.54E-58 T 28-03-2018 APY29_RS16775 08564875845bcfce8731f9ad0695b4a1 400 Gene3D G3DSA:3.30.1490.20 130 197 1.0E-21 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APY29_RS16775 08564875845bcfce8731f9ad0695b4a1 400 Gene3D G3DSA:3.40.50.20 14 113 6.1E-19 T 28-03-2018 APY29_RS16775 08564875845bcfce8731f9ad0695b4a1 400 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 397 51.449 T 28-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 APY29_RS16775 08564875845bcfce8731f9ad0695b4a1 400 SUPERFAMILY SSF52440 3 113 1.09E-30 T 28-03-2018 IPR016185 Pre-ATP-grasp domain APY29_RS04830 7979ada5cbc1c9f43550a14c0cd882bf 233 SUPERFAMILY SSF52172 1 176 1.38E-36 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS04830 7979ada5cbc1c9f43550a14c0cd882bf 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 218 3.7E-16 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS04830 7979ada5cbc1c9f43550a14c0cd882bf 233 Gene3D G3DSA:3.40.50.2300 1 120 1.7E-34 T 28-03-2018 APY29_RS04830 7979ada5cbc1c9f43550a14c0cd882bf 233 Pfam PF00072 Response regulator receiver domain 4 111 4.3E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS04830 7979ada5cbc1c9f43550a14c0cd882bf 233 Gene3D G3DSA:1.10.10.10 121 225 4.5E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS04830 7979ada5cbc1c9f43550a14c0cd882bf 233 SMART SM00448 1 112 3.7E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS04830 7979ada5cbc1c9f43550a14c0cd882bf 233 SMART SM00862 145 218 9.4E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS17770 7659476a6bfd6d4c2c7585197cbd2638 693 SUPERFAMILY SSF53649 150 437 1.33E-5 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APY29_RS17770 7659476a6bfd6d4c2c7585197cbd2638 693 Pfam PF05506 Domain of unknown function (DUF756) 501 586 4.5E-21 T 28-03-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 APY29_RS17770 7659476a6bfd6d4c2c7585197cbd2638 693 Pfam PF05506 Domain of unknown function (DUF756) 607 677 1.1E-11 T 28-03-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 APY29_RS17770 7659476a6bfd6d4c2c7585197cbd2638 693 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 6 36 8.4E-5 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APY29_RS17770 7659476a6bfd6d4c2c7585197cbd2638 693 Gene3D G3DSA:3.40.720.10 125 437 1.1E-22 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APY29_RS17770 7659476a6bfd6d4c2c7585197cbd2638 693 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 6 690 5.2E-267 T 28-03-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 APY29_RS17770 7659476a6bfd6d4c2c7585197cbd2638 693 Pfam PF04185 Phosphoesterase family 46 432 4.2E-105 T 28-03-2018 IPR007312 Phosphoesterase GO:0016788 APY29_RS20395 0c381ffcc4902b757cb4f7a41d452067 204 SUPERFAMILY SSF55961 19 200 1.08E-38 T 28-03-2018 APY29_RS20395 0c381ffcc4902b757cb4f7a41d452067 204 Pfam PF01852 START domain 18 202 2.1E-11 T 28-03-2018 IPR002913 START domain GO:0008289 APY29_RS20395 0c381ffcc4902b757cb4f7a41d452067 204 PIRSF PIRSF039033 1 204 2.7E-63 T 28-03-2018 IPR028347 START domain-containing protein APY29_RS20395 0c381ffcc4902b757cb4f7a41d452067 204 SMART SM00234 5 204 0.0088 T 28-03-2018 IPR002913 START domain GO:0008289 APY29_RS20395 0c381ffcc4902b757cb4f7a41d452067 204 Gene3D G3DSA:3.30.530.20 24 204 4.2E-33 T 28-03-2018 IPR023393 START-like domain APY29_RS08915 955e06691781b224abbf389d40c77d78 159 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 33 1.1E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS08915 955e06691781b224abbf389d40c77d78 159 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 13 137 2.0E-28 T 28-03-2018 IPR013362 Pilus modification type IV, PilV APY29_RS08915 955e06691781b224abbf389d40c77d78 159 Gene3D G3DSA:3.30.700.10 15 156 2.4E-4 T 28-03-2018 APY29_RS08915 955e06691781b224abbf389d40c77d78 159 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 32 5.4E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS05230 b650557a20170d57c6a9bb47020e18a4 180 Pfam PF03695 Uncharacterised protein family (UPF0149) 15 167 3.5E-28 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 APY29_RS05230 b650557a20170d57c6a9bb47020e18a4 180 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 2 180 30.752 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 APY29_RS05230 b650557a20170d57c6a9bb47020e18a4 180 SUPERFAMILY SSF101327 4 168 9.29E-39 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 APY29_RS05635 13fda443d1ba997156936179171ef157 658 SUPERFAMILY SSF52540 45 259 6.04E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS05635 13fda443d1ba997156936179171ef157 658 PRINTS PR00315 GTP-binding elongation factor signature 151 162 5.3E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS05635 13fda443d1ba997156936179171ef157 658 PRINTS PR00315 GTP-binding elongation factor signature 54 67 5.3E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS05635 13fda443d1ba997156936179171ef157 658 PRINTS PR00315 GTP-binding elongation factor signature 115 123 5.3E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS05635 13fda443d1ba997156936179171ef157 658 PRINTS PR00315 GTP-binding elongation factor signature 135 145 5.3E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS05635 13fda443d1ba997156936179171ef157 658 PRINTS PR00315 GTP-binding elongation factor signature 188 197 5.3E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS05635 13fda443d1ba997156936179171ef157 658 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 44 487 51.819 T 28-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 APY29_RS05635 13fda443d1ba997156936179171ef157 658 Pfam PF01583 Adenylylsulphate kinase 489 641 4.0E-70 T 28-03-2018 APY29_RS05635 13fda443d1ba997156936179171ef157 658 SUPERFAMILY SSF50465 356 457 1.69E-33 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APY29_RS05635 13fda443d1ba997156936179171ef157 658 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 474 654 5.8E-77 T 28-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 APY29_RS05635 13fda443d1ba997156936179171ef157 658 Gene3D G3DSA:3.40.50.300 483 657 8.7E-49 T 28-03-2018 APY29_RS05635 13fda443d1ba997156936179171ef157 658 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 108 123 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site APY29_RS05635 13fda443d1ba997156936179171ef157 658 SUPERFAMILY SSF52540 484 654 2.99E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS05635 13fda443d1ba997156936179171ef157 658 Gene3D G3DSA:3.40.50.300 36 264 1.5E-36 T 28-03-2018 APY29_RS05635 13fda443d1ba997156936179171ef157 658 SUPERFAMILY SSF50447 266 355 7.69E-23 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain APY29_RS05635 13fda443d1ba997156936179171ef157 658 Gene3D G3DSA:2.40.30.10 265 353 1.9E-23 T 28-03-2018 APY29_RS05635 13fda443d1ba997156936179171ef157 658 Pfam PF00009 Elongation factor Tu GTP binding domain 52 251 4.2E-40 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS05635 13fda443d1ba997156936179171ef157 658 Gene3D G3DSA:2.40.30.10 355 458 3.2E-26 T 28-03-2018 APY29_RS05635 13fda443d1ba997156936179171ef157 658 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 53 457 1.1E-207 T 28-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 APY29_RS05635 13fda443d1ba997156936179171ef157 658 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 486 658 37.855 T 28-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 APY29_RS02210 fa31bb6879d605f28042d4ee37eab7f8 302 TIGRFAM TIGR00688 rarD: protein RarD 11 264 4.1E-61 T 28-03-2018 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 APY29_RS02210 fa31bb6879d605f28042d4ee37eab7f8 302 SUPERFAMILY SSF103481 212 290 2.88E-11 T 28-03-2018 APY29_RS02210 fa31bb6879d605f28042d4ee37eab7f8 302 SUPERFAMILY SSF103481 55 148 1.22E-11 T 28-03-2018 APY29_RS02210 fa31bb6879d605f28042d4ee37eab7f8 302 Pfam PF00892 EamA-like transporter family 12 147 1.8E-12 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 APY29_RS02210 fa31bb6879d605f28042d4ee37eab7f8 302 Pfam PF00892 EamA-like transporter family 156 287 2.3E-7 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 APY29_RS15310 514101ed782dec8b3265f496cfbfd92a 474 Gene3D G3DSA:1.20.1600.10 18 464 1.7E-85 T 28-03-2018 APY29_RS15310 514101ed782dec8b3265f496cfbfd92a 474 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 458 1.9E-107 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APY29_RS15310 514101ed782dec8b3265f496cfbfd92a 474 Pfam PF02321 Outer membrane efflux protein 279 457 2.5E-23 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS15310 514101ed782dec8b3265f496cfbfd92a 474 Pfam PF02321 Outer membrane efflux protein 60 248 3.1E-24 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS15310 514101ed782dec8b3265f496cfbfd92a 474 SUPERFAMILY SSF56954 2 460 6.28E-98 T 28-03-2018 APY29_RS15560 c8365a653d6e272f780c12d9c5c4af08 218 SUPERFAMILY SSF53335 1 217 2.38E-54 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS15560 c8365a653d6e272f780c12d9c5c4af08 218 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 217 38.989 T 28-03-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 APY29_RS15560 c8365a653d6e272f780c12d9c5c4af08 218 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 216 6.6E-84 T 28-03-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 APY29_RS15560 c8365a653d6e272f780c12d9c5c4af08 218 PIRSF PIRSF023956 1 218 1.3E-74 T 28-03-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 APY29_RS15560 c8365a653d6e272f780c12d9c5c4af08 218 Gene3D G3DSA:3.40.50.150 16 218 1.5E-26 T 28-03-2018 APY29_RS15560 c8365a653d6e272f780c12d9c5c4af08 218 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 217 7.6E-84 T 28-03-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 APY29_RS11080 d5a3eda91df76526f21e233f9cdb725c 476 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 2 467 68.36 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 APY29_RS11080 d5a3eda91df76526f21e233f9cdb725c 476 Gene3D G3DSA:3.40.50.720 1 177 2.4E-50 T 28-03-2018 APY29_RS11080 d5a3eda91df76526f21e233f9cdb725c 476 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 156 184 3.5E-40 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 APY29_RS11080 d5a3eda91df76526f21e233f9cdb725c 476 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 132 145 3.5E-40 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 APY29_RS11080 d5a3eda91df76526f21e233f9cdb725c 476 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 313 339 3.5E-40 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 APY29_RS11080 d5a3eda91df76526f21e233f9cdb725c 476 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 208 225 3.5E-40 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 APY29_RS11080 d5a3eda91df76526f21e233f9cdb725c 476 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 226 242 3.5E-40 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 APY29_RS11080 d5a3eda91df76526f21e233f9cdb725c 476 PIRSF PIRSF000110 1 476 3.6E-163 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 APY29_RS11080 d5a3eda91df76526f21e233f9cdb725c 476 SUPERFAMILY SSF51735 3 179 4.92E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS11080 d5a3eda91df76526f21e233f9cdb725c 476 SUPERFAMILY SSF55347 171 466 6.21E-97 T 28-03-2018 APY29_RS11080 d5a3eda91df76526f21e233f9cdb725c 476 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 3 465 2.7E-137 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 APY29_RS11080 d5a3eda91df76526f21e233f9cdb725c 476 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 6 176 2.7E-42 T 28-03-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 APY29_RS11080 d5a3eda91df76526f21e233f9cdb725c 476 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 179 465 6.7E-96 T 28-03-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 APY29_RS11080 d5a3eda91df76526f21e233f9cdb725c 476 Gene3D G3DSA:3.30.360.10 178 471 6.5E-105 T 28-03-2018 APY29_RS15250 df371fc141ae77fc5c75cb3a66f93307 301 SUPERFAMILY SSF56349 131 186 1.17E-7 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APY29_RS15250 df371fc141ae77fc5c75cb3a66f93307 301 SUPERFAMILY SSF56349 215 281 1.17E-7 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APY29_RS15250 df371fc141ae77fc5c75cb3a66f93307 301 Gene3D G3DSA:1.10.150.130 129 259 5.6E-10 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal APY29_RS11110 d1bec888083af50383c47ac77533ade7 596 SUPERFAMILY SSF46977 454 596 9.42E-49 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APY29_RS11110 d1bec888083af50383c47ac77533ade7 596 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 12 596 1.0E-242 T 28-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APY29_RS11110 d1bec888083af50383c47ac77533ade7 596 Gene3D G3DSA:4.10.80.40 544 596 5.3E-20 T 28-03-2018 APY29_RS11110 d1bec888083af50383c47ac77533ade7 596 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 9 596 3.6E-289 T 28-03-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 APY29_RS11110 d1bec888083af50383c47ac77533ade7 596 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 596 9.2E-43 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APY29_RS11110 d1bec888083af50383c47ac77533ade7 596 SUPERFAMILY SSF51905 362 440 1.02E-75 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS11110 d1bec888083af50383c47ac77533ade7 596 SUPERFAMILY SSF51905 4 263 1.02E-75 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS11110 d1bec888083af50383c47ac77533ade7 596 Gene3D G3DSA:1.20.58.100 434 543 5.1E-32 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APY29_RS11110 d1bec888083af50383c47ac77533ade7 596 Pfam PF00890 FAD binding domain 12 408 6.0E-122 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 APY29_RS11110 d1bec888083af50383c47ac77533ade7 596 PIRSF PIRSF000171 1 586 5.7E-37 T 28-03-2018 APY29_RS11110 d1bec888083af50383c47ac77533ade7 596 Gene3D G3DSA:3.50.50.60 2 295 3.6E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS11110 d1bec888083af50383c47ac77533ade7 596 SUPERFAMILY SSF56425 240 358 4.34E-43 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 APY29_RS11110 d1bec888083af50383c47ac77533ade7 596 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 46 55 - T 28-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APY29_RS11110 d1bec888083af50383c47ac77533ade7 596 Gene3D G3DSA:3.50.50.60 313 424 3.1E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS15370 dba72e30d4ceb1d6f23a8ce57b1e01be 645 SUPERFAMILY SSF56235 1 220 1.63E-64 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APY29_RS15370 dba72e30d4ceb1d6f23a8ce57b1e01be 645 SUPERFAMILY SSF52402 253 403 4.19E-85 T 28-03-2018 APY29_RS15370 dba72e30d4ceb1d6f23a8ce57b1e01be 645 SUPERFAMILY SSF52402 489 629 4.19E-85 T 28-03-2018 APY29_RS15370 dba72e30d4ceb1d6f23a8ce57b1e01be 645 Gene3D G3DSA:3.60.20.10 1 236 3.7E-56 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APY29_RS15370 dba72e30d4ceb1d6f23a8ce57b1e01be 645 PIRSF PIRSF001589 1 645 1.8E-157 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 APY29_RS15370 dba72e30d4ceb1d6f23a8ce57b1e01be 645 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 569 4.9E-142 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 APY29_RS15370 dba72e30d4ceb1d6f23a8ce57b1e01be 645 Pfam PF00733 Asparagine synthase 263 633 5.4E-110 T 28-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 APY29_RS15370 dba72e30d4ceb1d6f23a8ce57b1e01be 645 Pfam PF13537 Glutamine amidotransferase domain 52 171 4.3E-47 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain APY29_RS15370 dba72e30d4ceb1d6f23a8ce57b1e01be 645 Gene3D G3DSA:3.40.50.620 237 641 3.5E-75 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS07540 4be156fe86c7372c8fe77a8901a14768 345 SUPERFAMILY SSF52540 5 336 7.19E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS07540 4be156fe86c7372c8fe77a8901a14768 345 Pfam PF00437 Type II/IV secretion system protein 12 269 3.3E-46 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APY29_RS07540 4be156fe86c7372c8fe77a8901a14768 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APY29_RS07540 4be156fe86c7372c8fe77a8901a14768 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 341 6.5E-158 T 28-03-2018 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 APY29_RS07540 4be156fe86c7372c8fe77a8901a14768 345 Gene3D G3DSA:3.40.50.300 273 345 9.9E-13 T 28-03-2018 APY29_RS07540 4be156fe86c7372c8fe77a8901a14768 345 Gene3D G3DSA:3.40.50.300 117 272 3.1E-26 T 28-03-2018 APY29_RS07540 4be156fe86c7372c8fe77a8901a14768 345 SMART SM00382 122 248 0.0063 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS07540 4be156fe86c7372c8fe77a8901a14768 345 Gene3D G3DSA:3.30.450.90 1 100 1.4E-24 T 28-03-2018 APY29_RS14440 73e62cbd666cf424617f115c1c3cb301 396 Pfam PF01494 FAD binding domain 5 322 1.6E-20 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 APY29_RS14440 73e62cbd666cf424617f115c1c3cb301 396 Gene3D G3DSA:3.50.50.60 1 358 3.4E-35 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS14440 73e62cbd666cf424617f115c1c3cb301 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 150 165 7.2E-10 T 28-03-2018 APY29_RS14440 73e62cbd666cf424617f115c1c3cb301 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 7.2E-10 T 28-03-2018 APY29_RS14440 73e62cbd666cf424617f115c1c3cb301 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 7.2E-10 T 28-03-2018 APY29_RS14440 73e62cbd666cf424617f115c1c3cb301 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 7.2E-10 T 28-03-2018 APY29_RS14440 73e62cbd666cf424617f115c1c3cb301 396 SUPERFAMILY SSF51905 269 369 1.3E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS14440 73e62cbd666cf424617f115c1c3cb301 396 SUPERFAMILY SSF51905 3 171 1.3E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS03295 161f27a098ccb110b28259dd187fa2b6 240 SUPERFAMILY SSF52540 4 217 4.36E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS03295 161f27a098ccb110b28259dd187fa2b6 240 Gene3D G3DSA:3.40.50.300 1 221 3.3E-51 T 28-03-2018 APY29_RS03295 161f27a098ccb110b28259dd187fa2b6 240 Pfam PF00005 ABC transporter 20 163 1.9E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS03295 161f27a098ccb110b28259dd187fa2b6 240 SMART SM00382 29 211 3.4E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS03295 161f27a098ccb110b28259dd187fa2b6 240 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS02150 9a78ea477dbecfe672aac1400a656aac 119 Gene3D G3DSA:3.30.450.30 4 117 2.7E-22 T 28-03-2018 APY29_RS02150 9a78ea477dbecfe672aac1400a656aac 119 SUPERFAMILY SSF103196 6 113 2.09E-5 T 28-03-2018 APY29_RS19110 d7a104bb3c9b5ec9b0dd1f46e40787e3 273 PIRSF PIRSF005917 1 273 1.4E-97 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APY29_RS19110 d7a104bb3c9b5ec9b0dd1f46e40787e3 273 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 84 95 - T 28-03-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APY29_RS19110 d7a104bb3c9b5ec9b0dd1f46e40787e3 273 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 6 227 37.19 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APY29_RS19110 d7a104bb3c9b5ec9b0dd1f46e40787e3 273 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 206 3.1E-30 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 APY29_RS19110 d7a104bb3c9b5ec9b0dd1f46e40787e3 273 Gene3D G3DSA:3.40.1010.10 4 114 1.0E-37 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 APY29_RS19110 d7a104bb3c9b5ec9b0dd1f46e40787e3 273 Gene3D G3DSA:3.30.950.10 115 230 1.1E-40 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 APY29_RS19110 d7a104bb3c9b5ec9b0dd1f46e40787e3 273 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 7 271 8.2E-81 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APY29_RS19110 d7a104bb3c9b5ec9b0dd1f46e40787e3 273 SUPERFAMILY SSF53790 5 225 9.81E-78 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 APY29_RS13625 24d471cd5b834c5295f5722c1e380380 350 Gene3D G3DSA:3.30.465.10 83 234 3.1E-47 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APY29_RS13625 24d471cd5b834c5295f5722c1e380380 350 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 350 80.758 T 28-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS13625 24d471cd5b834c5295f5722c1e380380 350 Gene3D G3DSA:3.30.43.10 7 81 1.1E-17 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APY29_RS13625 24d471cd5b834c5295f5722c1e380380 350 Pfam PF01565 FAD binding domain 35 153 1.0E-16 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APY29_RS13625 24d471cd5b834c5295f5722c1e380380 350 SUPERFAMILY SSF56176 17 202 1.82E-37 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APY29_RS13625 24d471cd5b834c5295f5722c1e380380 350 Gene3D G3DSA:3.90.78.10 237 350 4.2E-36 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS13625 24d471cd5b834c5295f5722c1e380380 350 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 19 347 5.7E-63 T 28-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS13625 24d471cd5b834c5295f5722c1e380380 350 SUPERFAMILY SSF56194 220 348 1.2E-43 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS13625 24d471cd5b834c5295f5722c1e380380 350 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 222 346 1.5E-32 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS18610 77caa539adb1ba163127d12bbe5acaa0 322 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 318 5.0E-117 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 APY29_RS18610 77caa539adb1ba163127d12bbe5acaa0 322 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 319 34.562 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 APY29_RS18610 77caa539adb1ba163127d12bbe5acaa0 322 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 33 314 3.6E-100 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 APY29_RS18610 77caa539adb1ba163127d12bbe5acaa0 322 Gene3D G3DSA:3.40.718.10 1 322 3.8E-120 T 28-03-2018 APY29_RS18610 77caa539adb1ba163127d12bbe5acaa0 322 SUPERFAMILY SSF53659 3 321 3.94E-103 T 28-03-2018 APY29_RS20595 8d4e8b2041c10be4d36666f356058ab9 296 SUPERFAMILY SSF55811 112 292 6.23E-41 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 APY29_RS20595 8d4e8b2041c10be4d36666f356058ab9 296 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 39 125 1.7E-4 T 28-03-2018 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 APY29_RS20595 8d4e8b2041c10be4d36666f356058ab9 296 Pfam PF00293 NUDIX domain 164 267 1.1E-15 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 APY29_RS20595 8d4e8b2041c10be4d36666f356058ab9 296 ProSitePatterns PS00893 Nudix box signature. 193 214 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APY29_RS20595 8d4e8b2041c10be4d36666f356058ab9 296 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 128 158 1.6E-8 T 28-03-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 APY29_RS20595 8d4e8b2041c10be4d36666f356058ab9 296 Gene3D G3DSA:3.90.79.10 160 296 2.5E-34 T 28-03-2018 APY29_RS13940 83ad60e82a5f47f6ebf48390f66db222 314 SUPERFAMILY SSF46785 4 88 1.13E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS13940 83ad60e82a5f47f6ebf48390f66db222 314 Gene3D G3DSA:3.40.190.10 180 264 2.5E-10 T 28-03-2018 APY29_RS13940 83ad60e82a5f47f6ebf48390f66db222 314 Gene3D G3DSA:1.10.10.10 1 85 6.3E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS13940 83ad60e82a5f47f6ebf48390f66db222 314 SUPERFAMILY SSF53850 90 290 1.71E-26 T 28-03-2018 APY29_RS13940 83ad60e82a5f47f6ebf48390f66db222 314 Pfam PF03466 LysR substrate binding domain 90 289 2.8E-21 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS13940 83ad60e82a5f47f6ebf48390f66db222 314 Gene3D G3DSA:3.40.190.10 90 179 9.2E-10 T 28-03-2018 APY29_RS13940 83ad60e82a5f47f6ebf48390f66db222 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.2E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS20265 98cca9c011a39dcfa3df87d0714ccd79 548 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 5 548 1.7E-298 T 28-03-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 APY29_RS20265 98cca9c011a39dcfa3df87d0714ccd79 548 SUPERFAMILY SSF100950 222 381 1.34E-21 T 28-03-2018 APY29_RS20265 98cca9c011a39dcfa3df87d0714ccd79 548 SUPERFAMILY SSF100950 409 479 1.34E-21 T 28-03-2018 APY29_RS20265 98cca9c011a39dcfa3df87d0714ccd79 548 Gene3D G3DSA:3.40.1080.10 2 217 2.4E-31 T 28-03-2018 APY29_RS20265 98cca9c011a39dcfa3df87d0714ccd79 548 SUPERFAMILY SSF100950 29 274 4.24E-32 T 28-03-2018 APY29_RS20265 98cca9c011a39dcfa3df87d0714ccd79 548 Gene3D G3DSA:3.40.1080.10 226 529 2.5E-38 T 28-03-2018 APY29_RS20265 98cca9c011a39dcfa3df87d0714ccd79 548 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 4 548 1.1E-302 T 28-03-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 SUPERFAMILY SSF82693 566 670 7.85E-31 T 28-03-2018 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 Gene3D G3DSA:3.30.70.1320 769 845 0.13 T 28-03-2018 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 SUPERFAMILY SSF82866 296 497 8.63E-49 T 28-03-2018 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 Gene3D G3DSA:3.30.70.1440 673 768 6.7E-21 T 28-03-2018 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 SUPERFAMILY SSF82693 38 131 2.79E-27 T 28-03-2018 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1042 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 Gene3D G3DSA:3.30.2090.10 180 275 4.8E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 SUPERFAMILY SSF82714 182 272 1.7E-22 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 Gene3D G3DSA:3.30.70.1430 568 669 8.9E-21 T 28-03-2018 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 SUPERFAMILY SSF82693 136 182 1.05E-25 T 28-03-2018 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 SUPERFAMILY SSF82693 274 330 1.05E-25 T 28-03-2018 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 5.5E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 5.5E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 5.5E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 5.5E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 5.5E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 5.5E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 5.5E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 5.5E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 5.5E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 Gene3D G3DSA:3.30.70.1430 38 140 4.2E-29 T 28-03-2018 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 SUPERFAMILY SSF82714 723 808 7.06E-22 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 SUPERFAMILY SSF82693 673 722 2.88E-24 T 28-03-2018 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 SUPERFAMILY SSF82693 809 858 2.88E-24 T 28-03-2018 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 Gene3D G3DSA:1.20.1640.10 286 507 1.1E-44 T 28-03-2018 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 Gene3D G3DSA:1.20.1640.10 846 1036 3.1E-31 T 28-03-2018 APY29_RS07915 3fdb9ab97d2b4541f1d3830894c09807 1047 SUPERFAMILY SSF82866 839 1026 1.23E-41 T 28-03-2018 APY29_RS16250 4fb58af76878c5385f12d3a7f4a42491 642 Gene3D G3DSA:3.20.20.80 26 355 1.2E-80 T 28-03-2018 APY29_RS16250 4fb58af76878c5385f12d3a7f4a42491 642 Pfam PF01120 Alpha-L-fucosidase 38 350 7.1E-36 T 28-03-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|Reactome: R-HSA-6798695 APY29_RS16250 4fb58af76878c5385f12d3a7f4a42491 642 SMART SM00812 39 395 6.0E-13 T 28-03-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|Reactome: R-HSA-6798695 APY29_RS16250 4fb58af76878c5385f12d3a7f4a42491 642 SUPERFAMILY SSF49785 355 484 1.42E-13 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS16250 4fb58af76878c5385f12d3a7f4a42491 642 SUPERFAMILY SSF51445 35 353 1.68E-85 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS16250 4fb58af76878c5385f12d3a7f4a42491 642 Gene3D G3DSA:2.60.120.260 358 486 2.5E-17 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS16250 4fb58af76878c5385f12d3a7f4a42491 642 Pfam PF00754 F5/8 type C domain 366 471 1.1E-8 T 28-03-2018 IPR000421 Coagulation factor 5/8 C-terminal domain APY29_RS16250 4fb58af76878c5385f12d3a7f4a42491 642 Pfam PF00754 F5/8 type C domain 517 622 1.2E-10 T 28-03-2018 IPR000421 Coagulation factor 5/8 C-terminal domain APY29_RS16250 4fb58af76878c5385f12d3a7f4a42491 642 SUPERFAMILY SSF49785 517 621 5.17E-14 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS16250 4fb58af76878c5385f12d3a7f4a42491 642 Gene3D G3DSA:2.60.120.260 495 640 1.8E-16 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS08445 fdf35c72b13f29b2dbb2c3f3427b4f61 231 Gene3D G3DSA:1.20.1540.10 2 208 1.6E-49 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APY29_RS08445 fdf35c72b13f29b2dbb2c3f3427b4f61 231 Pfam PF01694 Rhomboid family 59 208 6.1E-40 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APY29_RS08445 fdf35c72b13f29b2dbb2c3f3427b4f61 231 SMART SM01160 56 145 7.8E-6 T 28-03-2018 APY29_RS08445 fdf35c72b13f29b2dbb2c3f3427b4f61 231 SUPERFAMILY SSF144091 3 206 5.62E-45 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APY29_RS09100 6b9453b7b8930db0893e20a9ddb2731f 634 Gene3D G3DSA:3.30.980.10 69 227 1.5E-40 T 28-03-2018 APY29_RS09100 6b9453b7b8930db0893e20a9ddb2731f 634 Gene3D G3DSA:3.40.50.800 532 634 3.3E-26 T 28-03-2018 IPR004154 Anticodon-binding APY29_RS09100 6b9453b7b8930db0893e20a9ddb2731f 634 Gene3D G3DSA:3.30.930.10 228 531 1.1E-115 T 28-03-2018 APY29_RS09100 6b9453b7b8930db0893e20a9ddb2731f 634 Gene3D G3DSA:3.10.20.30 1 64 2.1E-20 T 28-03-2018 IPR012675 Beta-grasp domain APY29_RS09100 6b9453b7b8930db0893e20a9ddb2731f 634 SMART SM00863 170 219 1.6E-20 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APY29_RS09100 6b9453b7b8930db0893e20a9ddb2731f 634 SUPERFAMILY SSF81271 2 61 3.92E-15 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APY29_RS09100 6b9453b7b8930db0893e20a9ddb2731f 634 SUPERFAMILY SSF52954 530 631 1.07E-31 T 28-03-2018 IPR004154 Anticodon-binding APY29_RS09100 6b9453b7b8930db0893e20a9ddb2731f 634 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 2.6E-215 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APY29_RS09100 6b9453b7b8930db0893e20a9ddb2731f 634 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 33.61 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APY29_RS09100 6b9453b7b8930db0893e20a9ddb2731f 634 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 321 529 7.1E-40 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS09100 6b9453b7b8930db0893e20a9ddb2731f 634 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 174 219 1.8E-14 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APY29_RS09100 6b9453b7b8930db0893e20a9ddb2731f 634 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 6.4E-51 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APY29_RS09100 6b9453b7b8930db0893e20a9ddb2731f 634 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 6.4E-51 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APY29_RS09100 6b9453b7b8930db0893e20a9ddb2731f 634 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 6.4E-51 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APY29_RS09100 6b9453b7b8930db0893e20a9ddb2731f 634 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 6.4E-51 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APY29_RS09100 6b9453b7b8930db0893e20a9ddb2731f 634 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 6.4E-51 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APY29_RS09100 6b9453b7b8930db0893e20a9ddb2731f 634 SUPERFAMILY SSF55186 63 241 1.18E-63 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 APY29_RS09100 6b9453b7b8930db0893e20a9ddb2731f 634 SUPERFAMILY SSF55681 243 526 4.4E-94 T 28-03-2018 APY29_RS09100 6b9453b7b8930db0893e20a9ddb2731f 634 Pfam PF03129 Anticodon binding domain 541 630 1.8E-21 T 28-03-2018 IPR004154 Anticodon-binding APY29_RS09100 6b9453b7b8930db0893e20a9ddb2731f 634 Pfam PF02824 TGS domain 2 61 1.1E-11 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 APY29_RS01490 2bdf0c32e5058b8abdbe218b4625866e 655 Pfam PF05954 Phage late control gene D protein (GPD) 24 329 2.0E-78 T 28-03-2018 APY29_RS01490 2bdf0c32e5058b8abdbe218b4625866e 655 Gene3D G3DSA:3.55.50.10 96 187 1.4E-31 T 28-03-2018 APY29_RS01490 2bdf0c32e5058b8abdbe218b4625866e 655 Gene3D G3DSA:2.40.50.230 368 450 1.7E-32 T 28-03-2018 IPR006531 Gp5 N-terminal APY29_RS01490 2bdf0c32e5058b8abdbe218b4625866e 655 SUPERFAMILY SSF69349 440 655 8.63E-39 T 28-03-2018 APY29_RS01490 2bdf0c32e5058b8abdbe218b4625866e 655 SUPERFAMILY SSF69279 192 360 8.5E-21 T 28-03-2018 APY29_RS01490 2bdf0c32e5058b8abdbe218b4625866e 655 SUPERFAMILY SSF69279 8 182 4.7E-49 T 28-03-2018 APY29_RS01490 2bdf0c32e5058b8abdbe218b4625866e 655 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 8 520 1.6E-179 T 28-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset APY29_RS01490 2bdf0c32e5058b8abdbe218b4625866e 655 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 17 503 5.9E-130 T 28-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein APY29_RS01490 2bdf0c32e5058b8abdbe218b4625866e 655 SUPERFAMILY SSF69255 363 450 1.28E-29 T 28-03-2018 APY29_RS13575 2cb7d29dfe1569fbe034609699ed29e8 652 Gene3D G3DSA:1.25.40.10 1 102 6.9E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS13575 2cb7d29dfe1569fbe034609699ed29e8 652 SUPERFAMILY SSF48452 250 326 2.43E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS13575 2cb7d29dfe1569fbe034609699ed29e8 652 SUPERFAMILY SSF48452 159 210 2.43E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS13575 2cb7d29dfe1569fbe034609699ed29e8 652 Gene3D G3DSA:1.25.40.10 103 220 2.9E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS13575 2cb7d29dfe1569fbe034609699ed29e8 652 Pfam PF14559 Tetratricopeptide repeat 163 219 5.8E-7 T 28-03-2018 APY29_RS13575 2cb7d29dfe1569fbe034609699ed29e8 652 Pfam PF13432 Tetratricopeptide repeat 241 302 0.013 T 28-03-2018 APY29_RS13575 2cb7d29dfe1569fbe034609699ed29e8 652 Pfam PF13432 Tetratricopeptide repeat 3 53 0.0011 T 28-03-2018 APY29_RS13575 2cb7d29dfe1569fbe034609699ed29e8 652 SUPERFAMILY SSF48452 120 212 7.28E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS13575 2cb7d29dfe1569fbe034609699ed29e8 652 SUPERFAMILY SSF48452 11 77 7.28E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS13575 2cb7d29dfe1569fbe034609699ed29e8 652 Gene3D G3DSA:1.25.40.10 230 354 2.2E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS13575 2cb7d29dfe1569fbe034609699ed29e8 652 Gene3D G3DSA:2.40.160.10 384 572 2.3E-5 T 28-03-2018 APY29_RS13575 2cb7d29dfe1569fbe034609699ed29e8 652 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 9 648 6.7E-111 T 28-03-2018 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:0022891|GO:0042710 APY29_RS20320 06f347f80afb4283851723ed2c0663f1 941 SUPERFAMILY SSF81593 800 895 1.26E-20 T 28-03-2018 APY29_RS20320 06f347f80afb4283851723ed2c0663f1 941 SUPERFAMILY SSF81301 520 796 1.37E-69 T 28-03-2018 APY29_RS20320 06f347f80afb4283851723ed2c0663f1 941 Gene3D G3DSA:1.10.4050.10 522 626 5.9E-10 T 28-03-2018 APY29_RS20320 06f347f80afb4283851723ed2c0663f1 941 Gene3D G3DSA:1.10.4050.10 7 111 1.6E-5 T 28-03-2018 APY29_RS20320 06f347f80afb4283851723ed2c0663f1 941 Pfam PF08335 GlnD PII-uridylyltransferase 296 434 2.9E-42 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 APY29_RS20320 06f347f80afb4283851723ed2c0663f1 941 Pfam PF08335 GlnD PII-uridylyltransferase 810 892 3.2E-6 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 APY29_RS20320 06f347f80afb4283851723ed2c0663f1 941 Gene3D G3DSA:3.30.460.10 629 796 5.5E-53 T 28-03-2018 APY29_RS20320 06f347f80afb4283851723ed2c0663f1 941 Gene3D G3DSA:3.30.460.10 112 283 8.2E-54 T 28-03-2018 APY29_RS20320 06f347f80afb4283851723ed2c0663f1 941 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 41 275 5.2E-60 T 28-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 APY29_RS20320 06f347f80afb4283851723ed2c0663f1 941 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 546 789 3.5E-67 T 28-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 APY29_RS20320 06f347f80afb4283851723ed2c0663f1 941 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 37 936 18.377 T 28-03-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 APY29_RS20320 06f347f80afb4283851723ed2c0663f1 941 Gene3D G3DSA:1.20.120.330 284 438 4.0E-45 T 28-03-2018 APY29_RS20320 06f347f80afb4283851723ed2c0663f1 941 SUPERFAMILY SSF81301 29 285 6.54E-67 T 28-03-2018 APY29_RS20320 06f347f80afb4283851723ed2c0663f1 941 Gene3D G3DSA:1.20.120.330 797 921 4.2E-22 T 28-03-2018 APY29_RS20320 06f347f80afb4283851723ed2c0663f1 941 SUPERFAMILY SSF81593 286 435 5.02E-41 T 28-03-2018 APY29_RS06230 5c88be192e6385770224c7cc1c469f2b 795 Pfam PF00593 TonB dependent receptor 261 721 4.8E-39 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS06230 5c88be192e6385770224c7cc1c469f2b 795 Gene3D G3DSA:2.40.170.20 172 743 4.1E-62 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS06230 5c88be192e6385770224c7cc1c469f2b 795 Gene3D G3DSA:2.170.130.10 74 171 4.4E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS06230 5c88be192e6385770224c7cc1c469f2b 795 SUPERFAMILY SSF56935 86 726 1.32E-89 T 28-03-2018 APY29_RS06230 5c88be192e6385770224c7cc1c469f2b 795 Pfam PF07715 TonB-dependent Receptor Plug Domain 93 171 1.0E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS21750 f342df095bf531c2a3606b8f33814147 323 SUPERFAMILY SSF51430 4 315 1.96E-92 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS21750 f342df095bf531c2a3606b8f33814147 323 Pfam PF00248 Aldo/keto reductase family 16 314 4.9E-69 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS21750 f342df095bf531c2a3606b8f33814147 323 Gene3D G3DSA:3.20.20.100 1 321 1.9E-84 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS10940 a788da6315e104871a5470db9edb90b4 358 Gene3D G3DSA:3.40.50.1820 40 355 3.6E-25 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS10940 a788da6315e104871a5470db9edb90b4 358 TIGRFAM TIGR01836 PHA_synth_III_C: poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit 7 354 2.0E-174 T 28-03-2018 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit GO:0016746|GO:0042619 APY29_RS10940 a788da6315e104871a5470db9edb90b4 358 SUPERFAMILY SSF53474 37 352 1.62E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS10940 a788da6315e104871a5470db9edb90b4 358 Pfam PF00561 alpha/beta hydrolase fold 68 331 1.1E-22 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS14865 507d3641f2bed7bd3b424e5c99198972 236 Gene3D G3DSA:1.10.340.30 30 132 1.3E-21 T 28-03-2018 APY29_RS14865 507d3641f2bed7bd3b424e5c99198972 236 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 49 183 2.4E-18 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 APY29_RS14865 507d3641f2bed7bd3b424e5c99198972 236 PIRSF PIRSF001435 15 225 1.8E-48 T 28-03-2018 APY29_RS14865 507d3641f2bed7bd3b424e5c99198972 236 Pfam PF00633 Helix-hairpin-helix motif 114 142 4.9E-8 T 28-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 APY29_RS14865 507d3641f2bed7bd3b424e5c99198972 236 Gene3D G3DSA:1.10.1670.10 133 235 1.2E-31 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 APY29_RS14865 507d3641f2bed7bd3b424e5c99198972 236 SMART SM00478 53 200 9.0E-54 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 APY29_RS14865 507d3641f2bed7bd3b424e5c99198972 236 SUPERFAMILY SSF48150 16 228 2.2E-72 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 APY29_RS14865 507d3641f2bed7bd3b424e5c99198972 236 Hamap MF_00942 Endonuclease III [nth]. 16 224 37.272 T 28-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 APY29_RS14865 507d3641f2bed7bd3b424e5c99198972 236 TIGRFAM TIGR01083 nth: endonuclease III 20 209 1.6E-86 T 28-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 APY29_RS14865 507d3641f2bed7bd3b424e5c99198972 236 ProSitePatterns PS01155 Endonuclease III family signature. 117 146 - T 28-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 APY29_RS07770 365d1d818e8d35e9a74e77cd4abff164 520 SMART SM00155 176 203 2.2E-4 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 APY29_RS07770 365d1d818e8d35e9a74e77cd4abff164 520 SMART SM00155 411 438 5.6E-6 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 APY29_RS07770 365d1d818e8d35e9a74e77cd4abff164 520 Gene3D G3DSA:3.30.870.10 77 258 4.1E-27 T 28-03-2018 APY29_RS07770 365d1d818e8d35e9a74e77cd4abff164 520 Gene3D G3DSA:3.30.870.10 320 505 6.2E-22 T 28-03-2018 APY29_RS07770 365d1d818e8d35e9a74e77cd4abff164 520 SUPERFAMILY SSF56024 229 257 7.18E-36 T 28-03-2018 APY29_RS07770 365d1d818e8d35e9a74e77cd4abff164 520 SUPERFAMILY SSF56024 290 477 7.18E-36 T 28-03-2018 APY29_RS07770 365d1d818e8d35e9a74e77cd4abff164 520 Pfam PF13091 PLD-like domain 324 463 2.8E-19 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 APY29_RS07770 365d1d818e8d35e9a74e77cd4abff164 520 Pfam PF13091 PLD-like domain 88 235 6.7E-16 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 APY29_RS07770 365d1d818e8d35e9a74e77cd4abff164 520 SUPERFAMILY SSF56024 49 248 4.97E-39 T 28-03-2018 APY29_RS11670 0019c9ce41a25a302552274b435f99da 547 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 28 290 6.2E-123 T 28-03-2018 IPR022304 Integrating conjugative element, PFGI-1, ParB APY29_RS11670 0019c9ce41a25a302552274b435f99da 547 Pfam PF02195 ParB-like nuclease domain 39 103 7.1E-5 T 28-03-2018 IPR003115 ParB/Sulfiredoxin APY29_RS11670 0019c9ce41a25a302552274b435f99da 547 Gene3D G3DSA:1.10.10.10 162 196 3.9E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS11670 0019c9ce41a25a302552274b435f99da 547 SUPERFAMILY SSF110849 37 159 4.19E-10 T 28-03-2018 IPR003115 ParB/Sulfiredoxin APY29_RS11670 0019c9ce41a25a302552274b435f99da 547 Gene3D G3DSA:3.90.1530.10 31 144 5.7E-14 T 28-03-2018 APY29_RS00435 b8366003a0b38c10040f860a00638021 560 Pfam PF05569 BlaR1 peptidase M56 10 306 7.4E-85 T 28-03-2018 IPR008756 Peptidase M56 APY29_RS00435 b8366003a0b38c10040f860a00638021 560 Gene3D G3DSA:1.20.1170.10 85 560 7.8E-10 T 28-03-2018 APY29_RS19055 71ba5f88708a29bc8e7408ed84e3b062 361 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 359 24.531 T 28-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 APY29_RS19055 71ba5f88708a29bc8e7408ed84e3b062 361 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 361 8.9E-130 T 28-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 APY29_RS19055 71ba5f88708a29bc8e7408ed84e3b062 361 ProSitePatterns PS01348 MraY family signature 2. 190 201 - T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 APY29_RS19055 71ba5f88708a29bc8e7408ed84e3b062 361 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 APY29_RS19055 71ba5f88708a29bc8e7408ed84e3b062 361 Pfam PF00953 Glycosyl transferase family 4 99 285 1.5E-33 T 28-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 APY29_RS08910 b685d76db3c5a566c0d92fd6e911c7fc 172 SUPERFAMILY SSF54523 9 133 6.59E-23 T 28-03-2018 APY29_RS08910 b685d76db3c5a566c0d92fd6e911c7fc 172 Gene3D G3DSA:3.30.700.10 9 169 2.8E-21 T 28-03-2018 APY29_RS08910 b685d76db3c5a566c0d92fd6e911c7fc 172 Pfam PF12019 Type II transport protein GspH 46 162 8.5E-15 T 28-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 APY29_RS08910 b685d76db3c5a566c0d92fd6e911c7fc 172 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS08910 b685d76db3c5a566c0d92fd6e911c7fc 172 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 5.7E-10 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS08910 b685d76db3c5a566c0d92fd6e911c7fc 172 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 1.3E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS13720 f838134ec70fe75e5ba04ef8a6dcf603 207 SUPERFAMILY SSF52540 1 136 1.6E-9 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS13720 f838134ec70fe75e5ba04ef8a6dcf603 207 Gene3D G3DSA:3.40.50.300 1 140 5.5E-9 T 28-03-2018 APY29_RS14910 482300657ddbeb1ce2e2682c8b8fafc1 276 SMART SM00382 54 257 5.4E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS14910 482300657ddbeb1ce2e2682c8b8fafc1 276 Pfam PF00005 ABC transporter 45 201 1.1E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS14910 482300657ddbeb1ce2e2682c8b8fafc1 276 SUPERFAMILY SSF52540 31 263 3.22E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS14910 482300657ddbeb1ce2e2682c8b8fafc1 276 Gene3D G3DSA:3.40.50.300 28 273 1.4E-62 T 28-03-2018 APY29_RS14910 482300657ddbeb1ce2e2682c8b8fafc1 276 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS14910 482300657ddbeb1ce2e2682c8b8fafc1 276 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 30 276 1.1E-115 T 28-03-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 APY29_RS08455 75c1501a8cbf0ce7bbfa47bb7194ccb3 699 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 595 606 1.1E-23 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS08455 75c1501a8cbf0ce7bbfa47bb7194ccb3 699 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 521 537 1.1E-23 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS08455 75c1501a8cbf0ce7bbfa47bb7194ccb3 699 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 500 512 1.1E-23 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS08455 75c1501a8cbf0ce7bbfa47bb7194ccb3 699 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 482 494 1.1E-23 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS08455 75c1501a8cbf0ce7bbfa47bb7194ccb3 699 SUPERFAMILY SSF55486 48 699 3.08E-203 T 28-03-2018 APY29_RS08455 75c1501a8cbf0ce7bbfa47bb7194ccb3 699 Gene3D G3DSA:3.40.390.10 360 699 7.7E-111 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APY29_RS08455 75c1501a8cbf0ce7bbfa47bb7194ccb3 699 Gene3D G3DSA:3.40.390.10 55 294 1.3E-9 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APY29_RS08455 75c1501a8cbf0ce7bbfa47bb7194ccb3 699 Pfam PF05649 Peptidase family M13 61 438 2.6E-85 T 28-03-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 APY29_RS08455 75c1501a8cbf0ce7bbfa47bb7194ccb3 699 Pfam PF01431 Peptidase family M13 490 695 1.4E-69 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS19695 a9a8848193a6e679107779bc7b3cebdc 161 PIRSF PIRSF018472 1 159 2.4E-51 T 28-03-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type APY29_RS19695 a9a8848193a6e679107779bc7b3cebdc 161 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 6 151 1.3E-32 T 28-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 APY29_RS19695 a9a8848193a6e679107779bc7b3cebdc 161 Pfam PF04093 rod shape-determining protein MreD 3 152 8.1E-33 T 28-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 APY29_RS10140 069e5efa92fb32141df61701ef4932a2 458 Gene3D G3DSA:3.40.50.300 12 220 5.0E-56 T 28-03-2018 APY29_RS10140 069e5efa92fb32141df61701ef4932a2 458 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APY29_RS10140 069e5efa92fb32141df61701ef4932a2 458 SUPERFAMILY SSF52540 71 352 3.04E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS10140 069e5efa92fb32141df61701ef4932a2 458 Pfam PF00271 Helicase conserved C-terminal domain 237 336 6.6E-28 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS10140 069e5efa92fb32141df61701ef4932a2 458 SMART SM00487 21 219 7.4E-56 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APY29_RS10140 069e5efa92fb32141df61701ef4932a2 458 Gene3D G3DSA:3.40.50.300 221 454 9.9E-40 T 28-03-2018 APY29_RS10140 069e5efa92fb32141df61701ef4932a2 458 SMART SM00490 255 336 3.3E-29 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS10140 069e5efa92fb32141df61701ef4932a2 458 Pfam PF03880 DbpA RNA binding domain 386 456 1.2E-21 T 28-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain APY29_RS10140 069e5efa92fb32141df61701ef4932a2 458 Pfam PF00270 DEAD/DEAH box helicase 26 192 6.4E-45 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APY29_RS17155 f4ab5f5a66c2b860d8427e9e3edfe5e1 262 PIRSF PIRSF000709 17 209 7.8E-21 T 28-03-2018 APY29_RS17155 f4ab5f5a66c2b860d8427e9e3edfe5e1 262 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 23 237 3.9E-34 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 APY29_RS17155 f4ab5f5a66c2b860d8427e9e3edfe5e1 262 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 25 34 - T 28-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 APY29_RS17155 f4ab5f5a66c2b860d8427e9e3edfe5e1 262 Gene3D G3DSA:3.40.50.1240 19 255 1.5E-45 T 28-03-2018 IPR029033 Histidine phosphatase superfamily APY29_RS17155 f4ab5f5a66c2b860d8427e9e3edfe5e1 262 SUPERFAMILY SSF53254 22 233 2.49E-43 T 28-03-2018 IPR029033 Histidine phosphatase superfamily APY29_RS17155 f4ab5f5a66c2b860d8427e9e3edfe5e1 262 SMART SM00855 22 196 2.7E-19 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 APY29_RS04760 fe4c1131702d81e8b59caed552f0b7d3 202 Gene3D G3DSA:2.150.10.10 5 149 1.3E-12 T 28-03-2018 APY29_RS04760 fe4c1131702d81e8b59caed552f0b7d3 202 PRINTS PR00313 NodO calcium binding signature 23 34 1.1E-8 T 28-03-2018 APY29_RS04760 fe4c1131702d81e8b59caed552f0b7d3 202 PRINTS PR00313 NodO calcium binding signature 35 43 1.1E-8 T 28-03-2018 APY29_RS04760 fe4c1131702d81e8b59caed552f0b7d3 202 PRINTS PR00313 NodO calcium binding signature 44 52 1.1E-8 T 28-03-2018 APY29_RS04760 fe4c1131702d81e8b59caed552f0b7d3 202 PRINTS PR00313 NodO calcium binding signature 53 62 1.1E-8 T 28-03-2018 APY29_RS04760 fe4c1131702d81e8b59caed552f0b7d3 202 SUPERFAMILY SSF51120 11 141 3.66E-14 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal APY29_RS04760 fe4c1131702d81e8b59caed552f0b7d3 202 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 40 58 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site APY29_RS18205 1f2f94f828ca1521d16a4e9eee70802e 172 Gene3D G3DSA:3.40.980.10 7 166 1.9E-29 T 28-03-2018 IPR001453 MoaB/Mog domain APY29_RS18205 1f2f94f828ca1521d16a4e9eee70802e 172 PIRSF PIRSF006443 1 165 2.5E-62 T 28-03-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 APY29_RS18205 1f2f94f828ca1521d16a4e9eee70802e 172 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 10 151 1.5E-33 T 28-03-2018 IPR001453 MoaB/Mog domain APY29_RS18205 1f2f94f828ca1521d16a4e9eee70802e 172 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 6 167 6.3E-83 T 28-03-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 APY29_RS18205 1f2f94f828ca1521d16a4e9eee70802e 172 Pfam PF00994 Probable molybdopterin binding domain 14 154 8.9E-31 T 28-03-2018 IPR001453 MoaB/Mog domain APY29_RS18205 1f2f94f828ca1521d16a4e9eee70802e 172 SMART SM00852 13 157 3.5E-27 T 28-03-2018 IPR001453 MoaB/Mog domain APY29_RS18205 1f2f94f828ca1521d16a4e9eee70802e 172 SUPERFAMILY SSF53218 7 165 6.41E-43 T 28-03-2018 IPR001453 MoaB/Mog domain APY29_RS22765 58ed931cefada498cca92bd5175c2cb2 117 SUPERFAMILY SSF89946 8 112 3.92E-16 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain APY29_RS22765 58ed931cefada498cca92bd5175c2cb2 117 Gene3D G3DSA:3.30.70.970 3 113 1.3E-19 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain APY29_RS22765 58ed931cefada498cca92bd5175c2cb2 117 Pfam PF06877 Regulator of ribonuclease activity B 11 109 1.6E-17 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain APY29_RS07785 88b335885bcafea76d6cee6a371e7145 427 SUPERFAMILY SSF141868 162 408 1.01E-78 T 28-03-2018 IPR001633 EAL domain APY29_RS07785 88b335885bcafea76d6cee6a371e7145 427 Gene3D G3DSA:3.40.50.2300 14 165 7.6E-20 T 28-03-2018 APY29_RS07785 88b335885bcafea76d6cee6a371e7145 427 SUPERFAMILY SSF52172 16 133 7.83E-21 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS07785 88b335885bcafea76d6cee6a371e7145 427 Gene3D G3DSA:3.20.20.450 166 415 3.5E-87 T 28-03-2018 IPR001633 EAL domain APY29_RS07785 88b335885bcafea76d6cee6a371e7145 427 Pfam PF00563 EAL domain 162 395 1.5E-72 T 28-03-2018 IPR001633 EAL domain APY29_RS07785 88b335885bcafea76d6cee6a371e7145 427 Pfam PF00072 Response regulator receiver domain 16 132 5.8E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS07785 88b335885bcafea76d6cee6a371e7145 427 SMART SM00448 14 132 2.9E-13 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS07785 88b335885bcafea76d6cee6a371e7145 427 SMART SM00052 160 400 2.7E-86 T 28-03-2018 IPR001633 EAL domain APY29_RS08620 aa0dc9915532c01aa366bb5f2ff9fd99 308 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 11 286 4.3E-70 T 28-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 APY29_RS08620 aa0dc9915532c01aa366bb5f2ff9fd99 308 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 2 296 48.96 T 28-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 APY29_RS08620 aa0dc9915532c01aa366bb5f2ff9fd99 308 Gene3D G3DSA:3.40.50.150 98 295 1.3E-33 T 28-03-2018 APY29_RS08620 aa0dc9915532c01aa366bb5f2ff9fd99 308 PIRSF PIRSF037167 1 303 2.0E-124 T 28-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 APY29_RS08620 aa0dc9915532c01aa366bb5f2ff9fd99 308 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 9 290 5.9E-117 T 28-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 APY29_RS08620 aa0dc9915532c01aa366bb5f2ff9fd99 308 Gene3D G3DSA:1.10.8.10 10 97 5.2E-12 T 28-03-2018 APY29_RS08620 aa0dc9915532c01aa366bb5f2ff9fd99 308 Pfam PF05175 Methyltransferase small domain 131 213 3.0E-15 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 APY29_RS08620 aa0dc9915532c01aa366bb5f2ff9fd99 308 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 200 206 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APY29_RS08620 aa0dc9915532c01aa366bb5f2ff9fd99 308 SUPERFAMILY SSF53335 12 289 7.49E-48 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS07210 9e544ee6dea3cd8e958d4e298d838b44 113 SUPERFAMILY SSF51126 1 110 1.26E-18 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS07210 9e544ee6dea3cd8e958d4e298d838b44 113 Gene3D G3DSA:2.160.20.10 1 113 7.5E-23 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13160 62dcde12dec8f88e036094ee238acd81 753 Pfam PF12729 Four helix bundle sensory module for signal transduction 8 179 6.3E-17 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain APY29_RS13160 62dcde12dec8f88e036094ee238acd81 753 SMART SM00283 448 695 3.8E-93 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS13160 62dcde12dec8f88e036094ee238acd81 753 Pfam PF00672 HAMP domain 214 262 1.6E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13160 62dcde12dec8f88e036094ee238acd81 753 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 508 662 3.4E-53 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS13160 62dcde12dec8f88e036094ee238acd81 753 Gene3D G3DSA:1.10.287.950 504 699 1.5E-49 T 28-03-2018 APY29_RS13160 62dcde12dec8f88e036094ee238acd81 753 Gene3D G3DSA:1.10.287.950 364 503 1.3E-20 T 28-03-2018 APY29_RS13160 62dcde12dec8f88e036094ee238acd81 753 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 469 498 8.8E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13160 62dcde12dec8f88e036094ee238acd81 753 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 546 573 8.8E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13160 62dcde12dec8f88e036094ee238acd81 753 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 623 652 8.8E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13160 62dcde12dec8f88e036094ee238acd81 753 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 575 604 8.8E-59 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13160 62dcde12dec8f88e036094ee238acd81 753 SMART SM00304 214 266 1.5E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13160 62dcde12dec8f88e036094ee238acd81 753 SMART SM00304 395 447 11.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13160 62dcde12dec8f88e036094ee238acd81 753 SUPERFAMILY SSF158472 214 265 1.96E-9 T 28-03-2018 APY29_RS13160 62dcde12dec8f88e036094ee238acd81 753 Gene3D G3DSA:1.20.120.30 27 186 8.9E-8 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain APY29_RS13160 62dcde12dec8f88e036094ee238acd81 753 SUPERFAMILY SSF58104 415 697 5.23E-72 T 28-03-2018 APY29_RS14130 055716470e485b61571ddeba8fd642e9 375 Pfam PF01384 Phosphate transporter family 19 361 3.9E-79 T 28-03-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 APY29_RS15060 48e76114244e2ed978140316c29a6f03 291 SUPERFAMILY SSF52540 9 225 2.57E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS15060 48e76114244e2ed978140316c29a6f03 291 Pfam PF00005 ABC transporter 25 162 8.5E-20 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS15060 48e76114244e2ed978140316c29a6f03 291 SMART SM00382 34 212 6.4E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS15060 48e76114244e2ed978140316c29a6f03 291 Gene3D G3DSA:3.40.50.300 6 251 2.6E-43 T 28-03-2018 APY29_RS01465 4963b5365b5901a2badb0dadc9ddd1c6 175 SUPERFAMILY SSF88946 5 92 3.85E-17 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS01465 4963b5365b5901a2badb0dadc9ddd1c6 175 Pfam PF04542 Sigma-70 region 2 12 78 1.1E-11 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS01465 4963b5365b5901a2badb0dadc9ddd1c6 175 SUPERFAMILY SSF88659 97 171 2.83E-16 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS01465 4963b5365b5901a2badb0dadc9ddd1c6 175 Pfam PF08281 Sigma-70, region 4 111 163 2.7E-16 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS01465 4963b5365b5901a2badb0dadc9ddd1c6 175 Gene3D G3DSA:1.10.10.10 75 170 6.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS01465 4963b5365b5901a2badb0dadc9ddd1c6 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 167 3.9E-28 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS01465 4963b5365b5901a2badb0dadc9ddd1c6 175 Gene3D G3DSA:1.10.1740.10 2 74 5.9E-16 T 28-03-2018 APY29_RS07795 8e5de5ce9b3d6e004fe1bfd24a114502 718 SMART SM00304 100 157 6.4 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS07795 8e5de5ce9b3d6e004fe1bfd24a114502 718 SMART SM00304 194 247 27.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS07795 8e5de5ce9b3d6e004fe1bfd24a114502 718 SMART SM00304 373 425 3.4E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS07795 8e5de5ce9b3d6e004fe1bfd24a114502 718 SMART SM00304 586 639 120.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS07795 8e5de5ce9b3d6e004fe1bfd24a114502 718 SMART SM00304 284 337 35.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS07795 8e5de5ce9b3d6e004fe1bfd24a114502 718 SMART SM00283 426 659 1.8E-67 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS07795 8e5de5ce9b3d6e004fe1bfd24a114502 718 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 517 544 7.5E-27 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS07795 8e5de5ce9b3d6e004fe1bfd24a114502 718 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 546 575 7.5E-27 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS07795 8e5de5ce9b3d6e004fe1bfd24a114502 718 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 7.5E-27 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS07795 8e5de5ce9b3d6e004fe1bfd24a114502 718 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 486 626 8.4E-32 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS07795 8e5de5ce9b3d6e004fe1bfd24a114502 718 SUPERFAMILY SSF58104 393 660 2.35E-62 T 28-03-2018 APY29_RS07795 8e5de5ce9b3d6e004fe1bfd24a114502 718 Gene3D G3DSA:1.10.287.950 83 482 4.1E-17 T 28-03-2018 APY29_RS07795 8e5de5ce9b3d6e004fe1bfd24a114502 718 Gene3D G3DSA:1.10.287.950 483 663 3.9E-45 T 28-03-2018 APY29_RS21095 d2bdaf14a7dacd016097dcef284bca05 640 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 133 156 - T 28-03-2018 IPR025505 FHIPEP conserved site APY29_RS21095 d2bdaf14a7dacd016097dcef284bca05 640 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 177 194 9.7E-50 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APY29_RS21095 d2bdaf14a7dacd016097dcef284bca05 640 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 128 144 9.7E-50 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APY29_RS21095 d2bdaf14a7dacd016097dcef284bca05 640 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 66 85 9.7E-50 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APY29_RS21095 d2bdaf14a7dacd016097dcef284bca05 640 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 147 165 9.7E-50 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APY29_RS21095 d2bdaf14a7dacd016097dcef284bca05 640 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 29 42 9.7E-50 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APY29_RS21095 d2bdaf14a7dacd016097dcef284bca05 640 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 228 242 9.7E-50 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APY29_RS21095 d2bdaf14a7dacd016097dcef284bca05 640 Pfam PF00771 FHIPEP family 22 425 1.1E-155 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APY29_RS21095 d2bdaf14a7dacd016097dcef284bca05 640 Pfam PF00771 FHIPEP family 432 630 9.2E-46 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APY29_RS21095 d2bdaf14a7dacd016097dcef284bca05 640 PIRSF PIRSF005419 428 640 3.7E-50 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APY29_RS21095 d2bdaf14a7dacd016097dcef284bca05 640 PIRSF PIRSF005419 2 439 6.4E-161 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APY29_RS09665 3054d0aa6a570af9869b26a587ab1faf 219 SUPERFAMILY SSF48498 79 202 3.56E-12 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APY29_RS09665 3054d0aa6a570af9869b26a587ab1faf 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 62 1.3E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS09665 3054d0aa6a570af9869b26a587ab1faf 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 5.3E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS09665 3054d0aa6a570af9869b26a587ab1faf 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 5.3E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS09665 3054d0aa6a570af9869b26a587ab1faf 219 SUPERFAMILY SSF46689 5 73 1.35E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS09665 3054d0aa6a570af9869b26a587ab1faf 219 Gene3D G3DSA:1.10.10.60 3 64 8.7E-15 T 28-03-2018 APY29_RS09665 3054d0aa6a570af9869b26a587ab1faf 219 Gene3D G3DSA:1.10.357.10 65 212 8.3E-24 T 28-03-2018 APY29_RS12130 a8c176d462afb52d24ee567a143758af 325 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 2.7E-8 T 28-03-2018 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 APY29_RS12130 a8c176d462afb52d24ee567a143758af 325 Gene3D G3DSA:3.40.50.720 3 120 9.2E-20 T 28-03-2018 APY29_RS12130 a8c176d462afb52d24ee567a143758af 325 Gene3D G3DSA:3.40.1010.10 215 321 9.4E-12 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 APY29_RS12130 a8c176d462afb52d24ee567a143758af 325 SUPERFAMILY SSF51735 1 111 7.88E-22 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS12130 a8c176d462afb52d24ee567a143758af 325 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 9.7E-16 T 28-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 APY29_RS12130 a8c176d462afb52d24ee567a143758af 325 Pfam PF13241 Putative NAD(P)-binding 6 115 1.5E-25 T 28-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 APY29_RS12130 a8c176d462afb52d24ee567a143758af 325 Gene3D G3DSA:1.10.8.210 151 208 1.3E-15 T 28-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 APY29_RS12130 a8c176d462afb52d24ee567a143758af 325 SUPERFAMILY SSF53790 216 321 1.74E-14 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 APY29_RS12130 a8c176d462afb52d24ee567a143758af 325 SUPERFAMILY SSF75615 114 206 3.01E-25 T 28-03-2018 APY29_RS12130 a8c176d462afb52d24ee567a143758af 325 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 221 296 6.9E-11 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 APY29_RS12130 a8c176d462afb52d24ee567a143758af 325 Gene3D G3DSA:3.30.160.110 121 147 2.9E-15 T 28-03-2018 APY29_RS12130 a8c176d462afb52d24ee567a143758af 325 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 2.0E-67 T 28-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 APY29_RS18420 343063a1fb51dcbfbef697e1dac3485a 636 Pfam PF00072 Response regulator receiver domain 520 631 7.1E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS18420 343063a1fb51dcbfbef697e1dac3485a 636 Pfam PF00512 His Kinase A (phospho-acceptor) domain 275 339 2.1E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS18420 343063a1fb51dcbfbef697e1dac3485a 636 SMART SM00388 275 340 1.2E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS18420 343063a1fb51dcbfbef697e1dac3485a 636 SUPERFAMILY SSF52172 518 635 4.55E-25 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS18420 343063a1fb51dcbfbef697e1dac3485a 636 Gene3D G3DSA:3.30.565.10 335 495 1.7E-42 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS18420 343063a1fb51dcbfbef697e1dac3485a 636 SMART SM00387 386 496 9.1E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS18420 343063a1fb51dcbfbef697e1dac3485a 636 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 451 1.3E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS18420 343063a1fb51dcbfbef697e1dac3485a 636 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 475 1.3E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS18420 343063a1fb51dcbfbef697e1dac3485a 636 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 437 1.3E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS18420 343063a1fb51dcbfbef697e1dac3485a 636 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 493 1.3E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS18420 343063a1fb51dcbfbef697e1dac3485a 636 SMART SM00448 517 631 6.6E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS18420 343063a1fb51dcbfbef697e1dac3485a 636 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 387 494 7.4E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS18420 343063a1fb51dcbfbef697e1dac3485a 636 Gene3D G3DSA:1.10.287.130 265 334 9.1E-18 T 28-03-2018 APY29_RS18420 343063a1fb51dcbfbef697e1dac3485a 636 SUPERFAMILY SSF47384 263 341 1.31E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS18420 343063a1fb51dcbfbef697e1dac3485a 636 SUPERFAMILY SSF55874 330 494 1.44E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS18420 343063a1fb51dcbfbef697e1dac3485a 636 Gene3D G3DSA:3.40.50.2300 513 636 1.1E-24 T 28-03-2018 APY29_RS18420 343063a1fb51dcbfbef697e1dac3485a 636 Pfam PF05227 CHASE3 domain 46 176 1.4E-21 T 28-03-2018 IPR007891 CHASE3 APY29_RS19340 eeb4032e8a96bbfae240c206fefb0bce 278 SUPERFAMILY SSF46689 229 273 4.4E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS19340 eeb4032e8a96bbfae240c206fefb0bce 278 Pfam PF12833 Helix-turn-helix domain 201 272 8.0E-12 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS19340 eeb4032e8a96bbfae240c206fefb0bce 278 SMART SM00342 193 275 1.2E-11 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS19340 eeb4032e8a96bbfae240c206fefb0bce 278 Gene3D G3DSA:1.10.10.60 173 218 6.8E-6 T 28-03-2018 APY29_RS19340 eeb4032e8a96bbfae240c206fefb0bce 278 Gene3D G3DSA:1.10.10.60 222 274 1.0E-8 T 28-03-2018 APY29_RS14950 2d28e0e32a62a3b23e5a130f7ffd032e 842 SMART SM00357 186 245 2.6E-12 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 APY29_RS14950 2d28e0e32a62a3b23e5a130f7ffd032e 842 Gene3D G3DSA:1.10.10.10 121 194 1.8E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS14950 2d28e0e32a62a3b23e5a130f7ffd032e 842 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 176 816 2.0E-207 T 28-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 APY29_RS14950 2d28e0e32a62a3b23e5a130f7ffd032e 842 SUPERFAMILY SSF50249 737 816 1.72E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS14950 2d28e0e32a62a3b23e5a130f7ffd032e 842 SMART SM00955 360 688 1.8E-173 T 28-03-2018 APY29_RS14950 2d28e0e32a62a3b23e5a130f7ffd032e 842 Pfam PF08206 Ribonuclease B OB domain 187 244 3.3E-22 T 28-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain APY29_RS14950 2d28e0e32a62a3b23e5a130f7ffd032e 842 Gene3D G3DSA:2.40.50.140 733 818 2.1E-17 T 28-03-2018 APY29_RS14950 2d28e0e32a62a3b23e5a130f7ffd032e 842 Pfam PF00773 RNB domain 360 687 1.3E-102 T 28-03-2018 APY29_RS14950 2d28e0e32a62a3b23e5a130f7ffd032e 842 Pfam PF00575 S1 RNA binding domain 735 814 2.0E-11 T 28-03-2018 IPR003029 S1 domain GO:0003676 APY29_RS14950 2d28e0e32a62a3b23e5a130f7ffd032e 842 SUPERFAMILY SSF50249 325 734 1.14E-138 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS14950 2d28e0e32a62a3b23e5a130f7ffd032e 842 SUPERFAMILY SSF50249 238 337 3.51E-11 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS14950 2d28e0e32a62a3b23e5a130f7ffd032e 842 Hamap MF_01895 Ribonuclease R [rnr]. 140 817 57.032 T 28-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 APY29_RS14950 2d28e0e32a62a3b23e5a130f7ffd032e 842 TIGRFAM TIGR02063 RNase_R: ribonuclease R 121 817 4.5E-258 T 28-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 APY29_RS14950 2d28e0e32a62a3b23e5a130f7ffd032e 842 SMART SM00316 734 817 1.9E-11 T 28-03-2018 IPR022967 RNA-binding domain, S1 APY29_RS14950 2d28e0e32a62a3b23e5a130f7ffd032e 842 SUPERFAMILY SSF50249 167 247 8.8E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS14950 2d28e0e32a62a3b23e5a130f7ffd032e 842 ProSitePatterns PS01175 Ribonuclease II family signature. 655 679 - T 28-03-2018 IPR022966 Ribonuclease II/R, conserved site APY29_RS17795 df228c3615e999d3fb178bec29b29e7f 343 SUPERFAMILY SSF50331 240 339 1.3E-9 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal APY29_RS17795 df228c3615e999d3fb178bec29b29e7f 343 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 242 5.0E-113 T 28-03-2018 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 APY29_RS17795 df228c3615e999d3fb178bec29b29e7f 343 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS17795 df228c3615e999d3fb178bec29b29e7f 343 SMART SM00382 27 214 2.9E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS17795 df228c3615e999d3fb178bec29b29e7f 343 Gene3D G3DSA:3.40.50.300 2 243 5.7E-74 T 28-03-2018 APY29_RS17795 df228c3615e999d3fb178bec29b29e7f 343 Pfam PF00005 ABC transporter 18 164 3.9E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS17795 df228c3615e999d3fb178bec29b29e7f 343 SUPERFAMILY SSF52540 3 243 2.73E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17795 df228c3615e999d3fb178bec29b29e7f 343 Pfam PF12857 TOBE-like domain 282 336 1.8E-7 T 28-03-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 APY29_RS12740 94732de7ba80e1bbbaa41f493a2dc414 441 Pfam PF07196 Flagellin hook IN motif 124 177 4.9E-8 T 28-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 APY29_RS12740 94732de7ba80e1bbbaa41f493a2dc414 441 Gene3D G3DSA:1.20.1480.30 29 331 0.53 T 28-03-2018 APY29_RS12740 94732de7ba80e1bbbaa41f493a2dc414 441 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 214 430 1.4E-48 T 28-03-2018 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 APY29_RS12740 94732de7ba80e1bbbaa41f493a2dc414 441 Gene3D G3DSA:1.20.5.50 364 441 3.9E-5 T 28-03-2018 APY29_RS12740 94732de7ba80e1bbbaa41f493a2dc414 441 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 107 3.1E-17 T 28-03-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 APY29_RS02790 b68c647e7508c417cdf999677e967c81 365 Gene3D G3DSA:3.30.390.10 1 137 2.8E-34 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS02790 b68c647e7508c417cdf999677e967c81 365 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 11 124 2.4E-18 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APY29_RS02790 b68c647e7508c417cdf999677e967c81 365 Gene3D G3DSA:3.20.20.120 138 353 1.6E-61 T 28-03-2018 IPR029065 Enolase C-terminal domain-like APY29_RS02790 b68c647e7508c417cdf999677e967c81 365 SUPERFAMILY SSF54826 1 125 3.54E-31 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS02790 b68c647e7508c417cdf999677e967c81 365 SUPERFAMILY SSF51604 113 355 5.9E-68 T 28-03-2018 IPR029065 Enolase C-terminal domain-like APY29_RS02790 b68c647e7508c417cdf999677e967c81 365 Pfam PF13378 Enolase C-terminal domain-like 144 355 1.5E-51 T 28-03-2018 IPR029065 Enolase C-terminal domain-like APY29_RS02790 b68c647e7508c417cdf999677e967c81 365 SMART SM00922 141 239 3.1E-25 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APY29_RS02790 b68c647e7508c417cdf999677e967c81 365 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 99 124 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 APY29_RS08375 4a700a759285008315f111047677f415 83 Pfam PF02609 Exonuclease VII small subunit 15 65 1.7E-19 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APY29_RS08375 4a700a759285008315f111047677f415 83 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 14 74 15.865 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APY29_RS08375 4a700a759285008315f111047677f415 83 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 28 56 4.0E-10 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APY29_RS08375 4a700a759285008315f111047677f415 83 PIRSF PIRSF006488 1 81 5.2E-26 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APY29_RS08375 4a700a759285008315f111047677f415 83 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 15 68 2.3E-22 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APY29_RS08375 4a700a759285008315f111047677f415 83 SUPERFAMILY SSF116842 13 72 1.44E-18 T 28-03-2018 APY29_RS08375 4a700a759285008315f111047677f415 83 Gene3D G3DSA:1.10.287.1040 13 76 2.9E-23 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APY29_RS14485 7414939bafb1037399324994a8c07441 440 Gene3D G3DSA:3.65.10.10 225 437 5.6E-49 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 APY29_RS14485 7414939bafb1037399324994a8c07441 440 PIRSF PIRSF000505 5 436 8.6E-119 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 APY29_RS14485 7414939bafb1037399324994a8c07441 440 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 18 430 5.6E-122 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 APY29_RS14485 7414939bafb1037399324994a8c07441 440 ProSitePatterns PS00104 EPSP synthase signature 1. 93 107 - T 28-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 APY29_RS14485 7414939bafb1037399324994a8c07441 440 ProSitePatterns PS00885 EPSP synthase signature 2. 345 363 - T 28-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 APY29_RS14485 7414939bafb1037399324994a8c07441 440 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 12 423 1.7E-117 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 APY29_RS14485 7414939bafb1037399324994a8c07441 440 SUPERFAMILY SSF55205 9 432 8.99E-125 T 28-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 APY29_RS14485 7414939bafb1037399324994a8c07441 440 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 14 433 31.929 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 APY29_RS14485 7414939bafb1037399324994a8c07441 440 Gene3D G3DSA:3.65.10.10 25 224 1.8E-51 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 APY29_RS06590 8a57ff84fdda5a0ca4d2de14a098f58e 176 Pfam PF01584 CheW-like domain 35 153 3.6E-25 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS06590 8a57ff84fdda5a0ca4d2de14a098f58e 176 Gene3D G3DSA:2.40.50.180 52 143 8.8E-21 T 28-03-2018 APY29_RS06590 8a57ff84fdda5a0ca4d2de14a098f58e 176 SMART SM00260 29 166 2.9E-7 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS06590 8a57ff84fdda5a0ca4d2de14a098f58e 176 SUPERFAMILY SSF50341 28 169 1.16E-25 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS01880 e826b292e66c855fce396b786cdb39b3 66 SMART SM00530 4 59 7.6E-19 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APY29_RS01880 e826b292e66c855fce396b786cdb39b3 66 Pfam PF01381 Helix-turn-helix 5 57 2.7E-17 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APY29_RS01880 e826b292e66c855fce396b786cdb39b3 66 Gene3D G3DSA:1.10.260.40 3 64 1.8E-18 T 28-03-2018 APY29_RS01880 e826b292e66c855fce396b786cdb39b3 66 SUPERFAMILY SSF47413 3 64 2.15E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APY29_RS12255 229e59a3ea76a0b6705a2d020bdb127e 998 Pfam PF13700 Domain of unknown function (DUF4158) 5 168 3.1E-28 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 APY29_RS12255 229e59a3ea76a0b6705a2d020bdb127e 998 Pfam PF01526 Tn3 transposase DDE domain 589 975 2.1E-149 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 APY29_RS12600 7ca693846d078e353e3146fec38d693b 152 SUPERFAMILY SSF55811 7 145 3.79E-30 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 APY29_RS12600 7ca693846d078e353e3146fec38d693b 152 Pfam PF00293 NUDIX domain 12 120 6.7E-15 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 APY29_RS12600 7ca693846d078e353e3146fec38d693b 152 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APY29_RS12600 7ca693846d078e353e3146fec38d693b 152 Gene3D G3DSA:3.90.79.10 4 152 1.9E-29 T 28-03-2018 APY29_RS02140 af97787e6e5755c0fdc28c303cdaa989 180 Gene3D G3DSA:3.40.50.300 3 179 6.2E-15 T 28-03-2018 APY29_RS02140 af97787e6e5755c0fdc28c303cdaa989 180 SUPERFAMILY SSF52540 7 173 2.26E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS18115 29d0ca5b012ee16dac1fc612ffd35ea0 185 Pfam PF00467 KOW motif 134 168 3.1E-7 T 28-03-2018 IPR005824 KOW APY29_RS18115 29d0ca5b012ee16dac1fc612ffd35ea0 185 SUPERFAMILY SSF50104 129 184 2.66E-18 T 28-03-2018 IPR008991 Translation protein SH3-like domain APY29_RS18115 29d0ca5b012ee16dac1fc612ffd35ea0 185 Gene3D G3DSA:2.30.30.30 126 184 8.0E-20 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 APY29_RS18115 29d0ca5b012ee16dac1fc612ffd35ea0 185 Gene3D G3DSA:3.30.70.940 1 123 8.9E-37 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 APY29_RS18115 29d0ca5b012ee16dac1fc612ffd35ea0 185 SMART SM00739 131 158 2.6E-5 T 28-03-2018 IPR005824 KOW APY29_RS18115 29d0ca5b012ee16dac1fc612ffd35ea0 185 Pfam PF02357 Transcription termination factor nusG 2 116 1.8E-22 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 APY29_RS18115 29d0ca5b012ee16dac1fc612ffd35ea0 185 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 4 184 2.6E-61 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 APY29_RS18115 29d0ca5b012ee16dac1fc612ffd35ea0 185 ProSitePatterns PS01014 Transcription termination factor nusG signature. 168 177 - T 28-03-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site APY29_RS18115 29d0ca5b012ee16dac1fc612ffd35ea0 185 SUPERFAMILY SSF82679 2 121 1.96E-35 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 APY29_RS18115 29d0ca5b012ee16dac1fc612ffd35ea0 185 PRINTS PR00338 Transcription termination factor NUSG signature 161 177 8.3E-19 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 APY29_RS18115 29d0ca5b012ee16dac1fc612ffd35ea0 185 PRINTS PR00338 Transcription termination factor NUSG signature 56 68 8.3E-19 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 APY29_RS18115 29d0ca5b012ee16dac1fc612ffd35ea0 185 PRINTS PR00338 Transcription termination factor NUSG signature 143 158 8.3E-19 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 APY29_RS18115 29d0ca5b012ee16dac1fc612ffd35ea0 185 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 185 23.001 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 APY29_RS18115 29d0ca5b012ee16dac1fc612ffd35ea0 185 SMART SM00738 1 119 1.2E-42 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 APY29_RS09285 6e1dbf53d489e5528453261f236dbc67 284 SMART SM00465 32 110 2.3E-9 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily APY29_RS09285 6e1dbf53d489e5528453261f236dbc67 284 Gene3D G3DSA:3.40.1440.10 18 111 3.0E-16 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily APY29_RS09285 6e1dbf53d489e5528453261f236dbc67 284 SUPERFAMILY SSF82771 33 109 8.5E-9 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily APY29_RS04810 995bcd2963895d9b84505b1fd72752d3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.0E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS04810 995bcd2963895d9b84505b1fd72752d3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.0E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS04810 995bcd2963895d9b84505b1fd72752d3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.0E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS04810 995bcd2963895d9b84505b1fd72752d3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.0E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS04810 995bcd2963895d9b84505b1fd72752d3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.0E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS04810 995bcd2963895d9b84505b1fd72752d3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.0E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS04810 995bcd2963895d9b84505b1fd72752d3 246 SUPERFAMILY SSF51735 4 245 1.17E-66 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS04810 995bcd2963895d9b84505b1fd72752d3 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS04810 995bcd2963895d9b84505b1fd72752d3 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS04810 995bcd2963895d9b84505b1fd72752d3 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS04810 995bcd2963895d9b84505b1fd72752d3 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 245 1.2E-98 T 28-03-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216 APY29_RS04810 995bcd2963895d9b84505b1fd72752d3 246 Gene3D G3DSA:3.40.50.720 44 246 8.0E-57 T 28-03-2018 APY29_RS04810 995bcd2963895d9b84505b1fd72752d3 246 Gene3D G3DSA:3.40.50.720 1 43 9.7E-4 T 28-03-2018 APY29_RS04810 995bcd2963895d9b84505b1fd72752d3 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 189 0.0052 T 28-03-2018 APY29_RS04810 995bcd2963895d9b84505b1fd72752d3 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 243 2.4E-52 T 28-03-2018 APY29_RS01290 b0313d0d267008f818ab012fd5ee8859 1064 SUPERFAMILY SSF82866 828 1054 7.19E-55 T 28-03-2018 APY29_RS01290 b0313d0d267008f818ab012fd5ee8859 1064 Gene3D G3DSA:1.20.1640.10 847 1063 9.0E-39 T 28-03-2018 APY29_RS01290 b0313d0d267008f818ab012fd5ee8859 1064 Gene3D G3DSA:1.20.1640.10 293 520 7.9E-34 T 28-03-2018 APY29_RS01290 b0313d0d267008f818ab012fd5ee8859 1064 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1060 0.0 T 28-03-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 APY29_RS01290 b0313d0d267008f818ab012fd5ee8859 1064 Gene3D G3DSA:3.30.2090.10 190 277 2.8E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS01290 b0313d0d267008f818ab012fd5ee8859 1064 SUPERFAMILY SSF82714 192 274 2.88E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS01290 b0313d0d267008f818ab012fd5ee8859 1064 SUPERFAMILY SSF82693 42 128 8.2E-22 T 28-03-2018 APY29_RS01290 b0313d0d267008f818ab012fd5ee8859 1064 Gene3D G3DSA:3.30.70.1430 42 143 3.5E-22 T 28-03-2018 APY29_RS01290 b0313d0d267008f818ab012fd5ee8859 1064 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS01290 b0313d0d267008f818ab012fd5ee8859 1064 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 2.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS01290 b0313d0d267008f818ab012fd5ee8859 1064 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 2.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS01290 b0313d0d267008f818ab012fd5ee8859 1064 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 2.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS01290 b0313d0d267008f818ab012fd5ee8859 1064 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 2.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS01290 b0313d0d267008f818ab012fd5ee8859 1064 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS01290 b0313d0d267008f818ab012fd5ee8859 1064 SUPERFAMILY SSF82714 725 796 4.58E-12 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS01290 b0313d0d267008f818ab012fd5ee8859 1064 SUPERFAMILY SSF82693 277 333 2.09E-18 T 28-03-2018 APY29_RS01290 b0313d0d267008f818ab012fd5ee8859 1064 SUPERFAMILY SSF82693 156 191 2.09E-18 T 28-03-2018 APY29_RS01290 b0313d0d267008f818ab012fd5ee8859 1064 Pfam PF00873 AcrB/AcrD/AcrF family 5 1051 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS01290 b0313d0d267008f818ab012fd5ee8859 1064 Gene3D G3DSA:3.30.2090.10 724 832 3.7E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS01290 b0313d0d267008f818ab012fd5ee8859 1064 SUPERFAMILY SSF82866 300 506 7.59E-32 T 28-03-2018 APY29_RS01290 b0313d0d267008f818ab012fd5ee8859 1064 Gene3D G3DSA:3.30.70.1430 569 673 4.2E-13 T 28-03-2018 APY29_RS11705 211eee3d6011d2a387ac735bc65804c2 348 Gene3D G3DSA:3.90.120.10 181 325 2.5E-8 T 28-03-2018 APY29_RS11705 211eee3d6011d2a387ac735bc65804c2 348 Pfam PF00145 C-5 cytosine-specific DNA methylase 5 337 4.7E-54 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS11705 211eee3d6011d2a387ac735bc65804c2 348 SUPERFAMILY SSF53335 5 341 1.51E-82 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS11705 211eee3d6011d2a387ac735bc65804c2 348 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 72 84 - T 28-03-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 APY29_RS11705 211eee3d6011d2a387ac735bc65804c2 348 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 7 337 1.1E-40 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APY29_RS11705 211eee3d6011d2a387ac735bc65804c2 348 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 5 21 3.4E-11 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APY29_RS11705 211eee3d6011d2a387ac735bc65804c2 348 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 156 169 3.4E-11 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APY29_RS11705 211eee3d6011d2a387ac735bc65804c2 348 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 113 127 3.4E-11 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APY29_RS11705 211eee3d6011d2a387ac735bc65804c2 348 Gene3D G3DSA:3.40.50.150 1 180 8.4E-43 T 28-03-2018 APY29_RS11705 211eee3d6011d2a387ac735bc65804c2 348 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 319 337 - T 28-03-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 APY29_RS19025 b6ad8780d01465839596e6ec6cccf4a7 411 SUPERFAMILY SSF53067 9 198 5.89E-61 T 28-03-2018 APY29_RS19025 b6ad8780d01465839596e6ec6cccf4a7 411 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 1.0E-28 T 28-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 APY29_RS19025 b6ad8780d01465839596e6ec6cccf4a7 411 Pfam PF14450 Cell division protein FtsA 11 195 3.9E-11 T 28-03-2018 APY29_RS19025 b6ad8780d01465839596e6ec6cccf4a7 411 Pfam PF14450 Cell division protein FtsA 208 375 5.4E-24 T 28-03-2018 APY29_RS19025 b6ad8780d01465839596e6ec6cccf4a7 411 Gene3D G3DSA:3.30.420.40 198 257 1.0E-7 T 28-03-2018 APY29_RS19025 b6ad8780d01465839596e6ec6cccf4a7 411 Gene3D G3DSA:3.30.420.40 258 353 6.0E-19 T 28-03-2018 APY29_RS19025 b6ad8780d01465839596e6ec6cccf4a7 411 SUPERFAMILY SSF53067 200 378 1.3E-45 T 28-03-2018 APY29_RS19025 b6ad8780d01465839596e6ec6cccf4a7 411 Gene3D G3DSA:3.30.420.40 1 188 2.0E-39 T 28-03-2018 APY29_RS19025 b6ad8780d01465839596e6ec6cccf4a7 411 SMART SM00842 10 197 7.8E-104 T 28-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 APY29_RS19025 b6ad8780d01465839596e6ec6cccf4a7 411 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 2.7E-160 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 APY29_RS19025 b6ad8780d01465839596e6ec6cccf4a7 411 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 411 30.631 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 APY29_RS19025 b6ad8780d01465839596e6ec6cccf4a7 411 PIRSF PIRSF003101 1 411 3.5E-150 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 APY29_RS04205 1c68f875808017423369efad4788442b 442 Pfam PF01593 Flavin containing amine oxidoreductase 17 437 5.4E-28 T 28-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 APY29_RS04205 1c68f875808017423369efad4788442b 442 Gene3D G3DSA:3.50.50.60 2 441 5.8E-31 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS04205 1c68f875808017423369efad4788442b 442 SUPERFAMILY SSF51905 402 437 9.39E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS04205 1c68f875808017423369efad4788442b 442 SUPERFAMILY SSF51905 8 299 9.39E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS00255 e6b2f636a8e77340068d103d5390505f 425 SUPERFAMILY SSF55869 101 161 3.92E-21 T 28-03-2018 IPR035447 DNA topoisomerase I, N-terminal APY29_RS00255 e6b2f636a8e77340068d103d5390505f 425 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 311 325 1.0E-5 T 28-03-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 APY29_RS00255 e6b2f636a8e77340068d103d5390505f 425 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 364 375 1.0E-5 T 28-03-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 APY29_RS00255 e6b2f636a8e77340068d103d5390505f 425 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 224 238 1.0E-5 T 28-03-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 APY29_RS00255 e6b2f636a8e77340068d103d5390505f 425 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 246 262 1.0E-5 T 28-03-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 APY29_RS00255 e6b2f636a8e77340068d103d5390505f 425 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 201 220 1.0E-5 T 28-03-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 APY29_RS00255 e6b2f636a8e77340068d103d5390505f 425 Gene3D G3DSA:1.20.120.380 313 399 7.7E-27 T 28-03-2018 IPR027362 DNA topoisomerase I catalytic fragment, domain 2 APY29_RS00255 e6b2f636a8e77340068d103d5390505f 425 Gene3D G3DSA:3.30.66.10 94 159 1.6E-34 T 28-03-2018 IPR035447 DNA topoisomerase I, N-terminal APY29_RS00255 e6b2f636a8e77340068d103d5390505f 425 Gene3D G3DSA:3.90.15.10 160 307 2.2E-33 T 28-03-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 APY29_RS00255 e6b2f636a8e77340068d103d5390505f 425 SUPERFAMILY SSF56349 157 384 1.0E-67 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APY29_RS00255 e6b2f636a8e77340068d103d5390505f 425 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 165 368 1.9E-29 T 28-03-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 APY29_RS06445 9f95317f65a9d27eb517e634b07f0c30 134 Pfam PF00072 Response regulator receiver domain 10 120 1.4E-11 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS06445 9f95317f65a9d27eb517e634b07f0c30 134 SUPERFAMILY SSF52172 8 129 4.7E-22 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS06445 9f95317f65a9d27eb517e634b07f0c30 134 SMART SM00448 8 119 6.3E-10 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS06445 9f95317f65a9d27eb517e634b07f0c30 134 Gene3D G3DSA:3.40.50.2300 1 131 2.6E-20 T 28-03-2018 APY29_RS08865 9d9db50e9b6cc82e5b03d0af21b6e201 167 SUPERFAMILY SSF52255 9 165 8.63E-65 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 APY29_RS08865 9d9db50e9b6cc82e5b03d0af21b6e201 167 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 32.107 T 28-03-2018 IPR033747 Class I PurE APY29_RS08865 9d9db50e9b6cc82e5b03d0af21b6e201 167 SMART SM01001 8 159 8.0E-99 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 APY29_RS08865 9d9db50e9b6cc82e5b03d0af21b6e201 167 Pfam PF00731 AIR carboxylase 10 157 4.8E-62 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 APY29_RS08865 9d9db50e9b6cc82e5b03d0af21b6e201 167 PIRSF PIRSF001338 5 167 6.3E-66 T 28-03-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 APY29_RS08865 9d9db50e9b6cc82e5b03d0af21b6e201 167 Gene3D G3DSA:3.40.50.7700 1 167 8.7E-65 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 APY29_RS08865 9d9db50e9b6cc82e5b03d0af21b6e201 167 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 164 6.6E-64 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 APY29_RS07000 aedde2fd74fb93a28b678c7504ee3638 354 Gene3D G3DSA:3.20.20.210 1 354 3.7E-110 T 28-03-2018 APY29_RS07000 aedde2fd74fb93a28b678c7504ee3638 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 3 350 2.9E-138 T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 APY29_RS07000 aedde2fd74fb93a28b678c7504ee3638 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 7 349 3.2E-130 T 28-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 APY29_RS07000 aedde2fd74fb93a28b678c7504ee3638 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 140 156 - T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 APY29_RS07000 aedde2fd74fb93a28b678c7504ee3638 354 SUPERFAMILY SSF51726 1 353 5.58E-116 T 28-03-2018 APY29_RS07000 aedde2fd74fb93a28b678c7504ee3638 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 20 29 - T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 APY29_RS07000 aedde2fd74fb93a28b678c7504ee3638 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 4 352 50.328 T 28-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 APY29_RS07575 7fba95262c4df339ee5bf6502d23f497 155 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 14 145 1.6E-29 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APY29_RS07575 7fba95262c4df339ee5bf6502d23f497 155 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 11 149 22.124 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APY29_RS07575 7fba95262c4df339ee5bf6502d23f497 155 Gene3D G3DSA:3.30.420.140 9 153 1.6E-38 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 APY29_RS07575 7fba95262c4df339ee5bf6502d23f497 155 SMART SM00732 11 111 3.7E-28 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 APY29_RS07575 7fba95262c4df339ee5bf6502d23f497 155 SUPERFAMILY SSF53098 11 146 1.52E-31 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS07575 7fba95262c4df339ee5bf6502d23f497 155 Pfam PF03652 Holliday junction resolvase 12 146 1.8E-36 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APY29_RS03030 39e051b1aea952aa89de56f992334e62 187 Gene3D G3DSA:3.90.870.10 1 186 1.1E-51 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain APY29_RS03030 39e051b1aea952aa89de56f992334e62 187 Pfam PF01300 Telomere recombination 13 186 1.2E-40 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 APY29_RS03030 39e051b1aea952aa89de56f992334e62 187 SUPERFAMILY SSF55821 7 185 4.58E-51 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain APY29_RS03030 39e051b1aea952aa89de56f992334e62 187 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 4 186 38.992 T 28-03-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 APY29_RS12720 39a644561cef5b0ba4d19163c281e709 392 PRINTS PR01002 Flagellar protein FlgJ signature 16 39 1.0E-10 T 28-03-2018 APY29_RS12720 39a644561cef5b0ba4d19163c281e709 392 PRINTS PR01002 Flagellar protein FlgJ signature 61 83 1.0E-10 T 28-03-2018 APY29_RS12720 39a644561cef5b0ba4d19163c281e709 392 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 225 356 3.8E-20 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 APY29_RS12720 39a644561cef5b0ba4d19163c281e709 392 SMART SM00047 207 368 1.0E-38 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 APY29_RS12720 39a644561cef5b0ba4d19163c281e709 392 Gene3D G3DSA:1.10.530.10 207 358 3.1E-34 T 28-03-2018 APY29_RS12720 39a644561cef5b0ba4d19163c281e709 392 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 146 356 8.6E-58 T 28-03-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 APY29_RS12720 39a644561cef5b0ba4d19163c281e709 392 Pfam PF10135 Rod binding protein 38 84 8.2E-12 T 28-03-2018 IPR019301 Flagellar protein FlgJ, N-terminal APY29_RS22535 4662d1d9590e633722bdd5e19a2292c4 208 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.3E-20 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 APY29_RS22535 4662d1d9590e633722bdd5e19a2292c4 208 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.3E-20 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 APY29_RS22535 4662d1d9590e633722bdd5e19a2292c4 208 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.3E-20 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 APY29_RS22535 4662d1d9590e633722bdd5e19a2292c4 208 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 79 2.1E-26 T 28-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 APY29_RS22535 4662d1d9590e633722bdd5e19a2292c4 208 Gene3D G3DSA:1.20.1600.10 36 208 2.8E-4 T 28-03-2018 APY29_RS22535 4662d1d9590e633722bdd5e19a2292c4 208 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 161 19.032 T 28-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 APY29_RS22535 4662d1d9590e633722bdd5e19a2292c4 208 Pfam PF02416 mttA/Hcf106 family 4 34 4.0E-5 T 28-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 APY29_RS15915 b937835e6bbaac93e795ed2ab8c04b9a 457 Gene3D G3DSA:3.40.50.1820 256 453 1.8E-14 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS15915 b937835e6bbaac93e795ed2ab8c04b9a 457 SUPERFAMILY SSF53474 31 180 1.7E-7 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS15915 b937835e6bbaac93e795ed2ab8c04b9a 457 SUPERFAMILY SSF53474 260 454 7.46E-22 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS15915 b937835e6bbaac93e795ed2ab8c04b9a 457 Gene3D G3DSA:3.40.50.1820 37 225 3.8E-8 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS15915 b937835e6bbaac93e795ed2ab8c04b9a 457 PIRSF PIRSF029063 1 457 2.7E-178 T 28-03-2018 IPR011225 Type IV secretory pathway, VirJ component APY29_RS15915 b937835e6bbaac93e795ed2ab8c04b9a 457 Pfam PF06057 Bacterial virulence protein (VirJ) 266 453 6.5E-84 T 28-03-2018 IPR010333 Bacterial virulence APY29_RS10370 a551726df893d34be4b4a545c76e06d5 316 SUPERFAMILY SSF55347 136 290 2.14E-35 T 28-03-2018 APY29_RS10370 a551726df893d34be4b4a545c76e06d5 316 Gene3D G3DSA:3.30.360.10 144 290 4.8E-46 T 28-03-2018 APY29_RS10370 a551726df893d34be4b4a545c76e06d5 316 SMART SM00859 7 128 2.6E-33 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APY29_RS10370 a551726df893d34be4b4a545c76e06d5 316 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 6 316 30.894 T 28-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 APY29_RS10370 a551726df893d34be4b4a545c76e06d5 316 Gene3D G3DSA:3.40.50.720 1 143 3.2E-34 T 28-03-2018 APY29_RS10370 a551726df893d34be4b4a545c76e06d5 316 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 7 315 3.8E-101 T 28-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 APY29_RS10370 a551726df893d34be4b4a545c76e06d5 316 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 8 122 9.9E-28 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APY29_RS10370 a551726df893d34be4b4a545c76e06d5 316 SUPERFAMILY SSF51735 5 152 5.1E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS10370 a551726df893d34be4b4a545c76e06d5 316 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 131 147 - T 28-03-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 APY29_RS19045 63c8a028c7cbca97200ff9013bb7f2ec 426 Gene3D G3DSA:3.40.50.2000 19 185 2.1E-34 T 28-03-2018 APY29_RS19045 63c8a028c7cbca97200ff9013bb7f2ec 426 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 198 361 1.3E-39 T 28-03-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 APY29_RS19045 63c8a028c7cbca97200ff9013bb7f2ec 426 Gene3D G3DSA:3.40.50.2000 186 363 1.1E-35 T 28-03-2018 APY29_RS19045 63c8a028c7cbca97200ff9013bb7f2ec 426 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 21 369 35.904 T 28-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 APY29_RS19045 63c8a028c7cbca97200ff9013bb7f2ec 426 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 21 158 3.7E-40 T 28-03-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 APY29_RS19045 63c8a028c7cbca97200ff9013bb7f2ec 426 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 20 365 2.1E-108 T 28-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 APY29_RS19045 63c8a028c7cbca97200ff9013bb7f2ec 426 SUPERFAMILY SSF53756 20 368 2.75E-113 T 28-03-2018 APY29_RS16885 d2b8a5b45fc44b61c5f25739fafaea6a 555 Pfam PF08019 Domain of unknown function (DUF1705) 68 216 7.7E-47 T 28-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 APY29_RS16885 d2b8a5b45fc44b61c5f25739fafaea6a 555 Pfam PF00884 Sulfatase 247 533 1.2E-48 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APY29_RS16885 d2b8a5b45fc44b61c5f25739fafaea6a 555 SUPERFAMILY SSF53649 244 539 1.57E-19 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APY29_RS16885 d2b8a5b45fc44b61c5f25739fafaea6a 555 Gene3D G3DSA:3.40.720.10 234 538 3.3E-19 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APY29_RS01230 289f43acdeeb26b3a4e494edda4687bb 259 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 28-03-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 APY29_RS01230 289f43acdeeb26b3a4e494edda4687bb 259 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 247 1.2E-23 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS01230 289f43acdeeb26b3a4e494edda4687bb 259 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 254 3.8E-74 T 28-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APY29_RS01230 289f43acdeeb26b3a4e494edda4687bb 259 SUPERFAMILY SSF56219 1 254 2.62E-75 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS01230 289f43acdeeb26b3a4e494edda4687bb 259 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 211 222 - T 28-03-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 APY29_RS01230 289f43acdeeb26b3a4e494edda4687bb 259 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 253 2.0E-80 T 28-03-2018 APY29_RS01230 289f43acdeeb26b3a4e494edda4687bb 259 Gene3D G3DSA:3.60.10.10 1 255 1.4E-50 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS01020 e0f3a1110be2a1adf3b6a29bb83a1a95 93 Gene3D G3DSA:1.10.1220.10 48 89 3.3E-9 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APY29_RS07960 c27cce16e5429467a92f6fd382f259f9 405 Gene3D G3DSA:1.20.1250.20 3 195 4.9E-26 T 28-03-2018 APY29_RS07960 c27cce16e5429467a92f6fd382f259f9 405 Gene3D G3DSA:1.20.1250.20 197 398 4.8E-18 T 28-03-2018 APY29_RS07960 c27cce16e5429467a92f6fd382f259f9 405 Pfam PF07690 Major Facilitator Superfamily 20 329 3.2E-37 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS07960 c27cce16e5429467a92f6fd382f259f9 405 SUPERFAMILY SSF103473 8 394 1.96E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS01075 4785af4ca413d4e388374409a12e9123 460 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 70 95 - T 28-03-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 APY29_RS01075 4785af4ca413d4e388374409a12e9123 460 Gene3D G3DSA:1.20.1250.20 17 225 3.1E-18 T 28-03-2018 APY29_RS01075 4785af4ca413d4e388374409a12e9123 460 Gene3D G3DSA:1.20.1250.20 226 445 1.3E-18 T 28-03-2018 APY29_RS01075 4785af4ca413d4e388374409a12e9123 460 SUPERFAMILY SSF103473 15 434 1.83E-35 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS01075 4785af4ca413d4e388374409a12e9123 460 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 19 452 3.1E-119 T 28-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 APY29_RS01075 4785af4ca413d4e388374409a12e9123 460 Pfam PF13347 MFS/sugar transport protein 21 439 1.3E-97 T 28-03-2018 APY29_RS18845 521189e9e102d6c7eab1f307d8b9c926 332 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 28-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 APY29_RS18845 521189e9e102d6c7eab1f307d8b9c926 332 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.54 T 28-03-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 APY29_RS18845 521189e9e102d6c7eab1f307d8b9c926 332 Gene3D G3DSA:1.10.1200.80 251 323 4.5E-22 T 28-03-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 APY29_RS18845 521189e9e102d6c7eab1f307d8b9c926 332 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 318 6.2E-120 T 28-03-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 APY29_RS18845 521189e9e102d6c7eab1f307d8b9c926 332 Gene3D G3DSA:3.20.20.70 8 240 1.7E-56 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS18845 521189e9e102d6c7eab1f307d8b9c926 332 Pfam PF01207 Dihydrouridine synthase (Dus) 13 316 1.8E-104 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APY29_RS18845 521189e9e102d6c7eab1f307d8b9c926 332 PIRSF PIRSF006621 1 325 3.6E-109 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APY29_RS18845 521189e9e102d6c7eab1f307d8b9c926 332 SUPERFAMILY SSF51395 10 318 2.12E-90 T 28-03-2018 APY29_RS03725 addd5bd8265355ab7ff00bcb1358b0a7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 5.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03725 addd5bd8265355ab7ff00bcb1358b0a7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 5.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03725 addd5bd8265355ab7ff00bcb1358b0a7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 5.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03725 addd5bd8265355ab7ff00bcb1358b0a7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 5.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03725 addd5bd8265355ab7ff00bcb1358b0a7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 5.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03725 addd5bd8265355ab7ff00bcb1358b0a7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 5.3E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03725 addd5bd8265355ab7ff00bcb1358b0a7 268 Gene3D G3DSA:3.40.50.720 58 268 2.9E-51 T 28-03-2018 APY29_RS03725 addd5bd8265355ab7ff00bcb1358b0a7 268 Gene3D G3DSA:3.40.50.720 11 57 5.5E-7 T 28-03-2018 APY29_RS03725 addd5bd8265355ab7ff00bcb1358b0a7 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 8.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03725 addd5bd8265355ab7ff00bcb1358b0a7 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 8.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03725 addd5bd8265355ab7ff00bcb1358b0a7 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 8.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS03725 addd5bd8265355ab7ff00bcb1358b0a7 268 SUPERFAMILY SSF51735 16 262 3.58E-67 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS03725 addd5bd8265355ab7ff00bcb1358b0a7 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APY29_RS03725 addd5bd8265355ab7ff00bcb1358b0a7 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 262 4.9E-59 T 28-03-2018 APY29_RS13085 db55198561e1532a6010cd7c057e8e09 121 Gene3D G3DSA:3.40.50.2300 1 121 6.6E-36 T 28-03-2018 APY29_RS13085 db55198561e1532a6010cd7c057e8e09 121 SMART SM00448 3 116 1.2E-36 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS13085 db55198561e1532a6010cd7c057e8e09 121 SUPERFAMILY SSF52172 3 121 3.13E-36 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS13085 db55198561e1532a6010cd7c057e8e09 121 Pfam PF00072 Response regulator receiver domain 5 116 1.5E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS11450 b4417e4ab540e82119f60a67c266d1b9 476 Gene3D G3DSA:1.20.5.340 54 146 8.3E-5 T 28-03-2018 APY29_RS11450 b4417e4ab540e82119f60a67c266d1b9 476 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 2 466 5.8E-188 T 28-03-2018 IPR021207 Integrating conjugative element protein, PFL4705 APY29_RS12170 8ccb0199d30f019955d837017075dad3 309 Pfam PF13276 HTH-like domain 63 119 8.8E-14 T 28-03-2018 IPR025948 HTH-like domain APY29_RS12170 8ccb0199d30f019955d837017075dad3 309 SUPERFAMILY SSF53098 137 303 8.47E-41 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS12170 8ccb0199d30f019955d837017075dad3 309 Gene3D G3DSA:3.30.420.10 135 308 7.2E-40 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS12170 8ccb0199d30f019955d837017075dad3 309 Pfam PF00665 Integrase core domain 144 258 9.7E-32 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 APY29_RS13975 8ab874d7f47f6154b9ba44279c15ace5 162 Gene3D G3DSA:1.10.10.10 17 64 1.0E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS13975 8ab874d7f47f6154b9ba44279c15ace5 162 Gene3D G3DSA:1.10.10.10 111 162 1.9E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS13975 8ab874d7f47f6154b9ba44279c15ace5 162 Gene3D G3DSA:1.10.10.10 65 109 2.3E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS13975 8ab874d7f47f6154b9ba44279c15ace5 162 Hamap MF_01114 Regulatory protein RecX [recX]. 11 162 14.355 T 28-03-2018 IPR003783 Regulatory protein RecX GO:0006282 APY29_RS13975 8ab874d7f47f6154b9ba44279c15ace5 162 Pfam PF02631 RecX family 41 156 5.5E-27 T 28-03-2018 IPR003783 Regulatory protein RecX GO:0006282 APY29_RS08275 573f6dd63372bf798f8453934a7521ce 214 Gene3D G3DSA:3.30.160.150 21 175 3.1E-37 T 28-03-2018 APY29_RS08275 573f6dd63372bf798f8453934a7521ce 214 Pfam PF04390 Lipopolysaccharide-assembly 39 162 7.6E-6 T 28-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 APY29_RS08275 573f6dd63372bf798f8453934a7521ce 214 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 6 167 23.769 T 28-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 APY29_RS19435 43c379b582f762eaa6068008041de5be 782 Gene3D G3DSA:3.20.20.80 107 474 6.4E-129 T 28-03-2018 APY29_RS19435 43c379b582f762eaa6068008041de5be 782 Gene3D G3DSA:1.20.120.670 478 760 2.2E-52 T 28-03-2018 APY29_RS19435 43c379b582f762eaa6068008041de5be 782 Pfam PF12971 Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain 18 98 1.8E-18 T 28-03-2018 IPR024240 Alpha-N-acetylglucosaminidase, N-terminal KEGG: 00531+3.2.1.50|Reactome: R-HSA-2024096 APY29_RS19435 43c379b582f762eaa6068008041de5be 782 Gene3D G3DSA:3.30.379.10 14 106 3.8E-21 T 28-03-2018 APY29_RS19435 43c379b582f762eaa6068008041de5be 782 Pfam PF05089 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain 111 473 5.3E-133 T 28-03-2018 IPR024733 Alpha-N-acetylglucosaminidase, tim-barrel domain KEGG: 00531+3.2.1.50|Reactome: R-HSA-2024096 APY29_RS19435 43c379b582f762eaa6068008041de5be 782 Pfam PF12972 Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain 482 744 7.4E-47 T 28-03-2018 IPR024732 Alpha-N-acetylglucosaminidase, C-terminal KEGG: 00531+3.2.1.50|Reactome: R-HSA-2024096 APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 Gene3D G3DSA:1.10.1780.10 1 150 1.6E-24 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 Gene3D G3DSA:3.40.50.300 455 655 4.1E-43 T 28-03-2018 APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 28-03-2018 IPR028299 ClpA/B, conserved site 2 APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 SUPERFAMILY SSF52540 440 745 5.5E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 SUPERFAMILY SSF81923 1 141 3.53E-56 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 650 8.2E-46 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 28-03-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 SMART SM01086 656 745 2.1E-32 T 28-03-2018 IPR019489 Clp ATPase, C-terminal APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 SUPERFAMILY SSF52540 171 433 2.06E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 SMART SM00382 490 626 2.7E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 SMART SM00382 209 354 5.5E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 1.5E-37 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 1.5E-37 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 1.5E-37 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 1.5E-37 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 Gene3D G3DSA:1.10.8.60 354 454 4.0E-27 T 28-03-2018 APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.6E-12 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 Gene3D G3DSA:3.40.50.300 168 353 4.3E-26 T 28-03-2018 APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 Gene3D G3DSA:1.10.8.60 656 753 1.1E-20 T 28-03-2018 APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 657 736 2.1E-21 T 28-03-2018 IPR019489 Clp ATPase, C-terminal APY29_RS12590 36a52f540f6468b513c2f392e1aadf78 760 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 315 1.5E-10 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 Pfam PF00072 Response regulator receiver domain 7 119 3.7E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 Pfam PF00072 Response regulator receiver domain 529 639 2.1E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 Pfam PF08448 PAS fold 143 242 1.2E-9 T 28-03-2018 IPR013656 PAS fold-4 APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 Gene3D G3DSA:3.30.565.10 342 507 6.3E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 391 506 6.6E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 SUPERFAMILY SSF52172 3 139 2.28E-32 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 486 3.0E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 465 3.0E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 451 3.0E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 505 3.0E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 Gene3D G3DSA:3.40.50.2300 2 129 1.6E-30 T 28-03-2018 APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 SUPERFAMILY SSF47384 275 347 7.26E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 Gene3D G3DSA:3.30.450.20 130 254 1.2E-17 T 28-03-2018 APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 348 1.7E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 SMART SM00448 5 119 7.0E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 SMART SM00448 527 639 2.1E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 Gene3D G3DSA:3.40.50.2300 521 651 4.0E-27 T 28-03-2018 APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 Gene3D G3DSA:1.10.287.130 270 341 1.8E-6 T 28-03-2018 APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 SUPERFAMILY SSF52172 526 645 4.13E-30 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 SUPERFAMILY SSF55785 125 235 7.42E-12 T 28-03-2018 IPR000014 PAS domain APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 SMART SM00387 390 508 4.6E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 135 247 7.1E-7 T 28-03-2018 IPR000014 PAS domain APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 SUPERFAMILY SSF55874 340 506 6.55E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16450 b3cdc00fb42165da879a3aa6047f2ab8 651 SMART SM00388 281 349 6.0E-4 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS17650 fd92e8867294becd3d47076908f4b4dd 335 SMART SM01329 4 331 1.8E-178 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 APY29_RS17650 fd92e8867294becd3d47076908f4b4dd 335 SUPERFAMILY SSF53659 1 335 2.3E-123 T 28-03-2018 APY29_RS17650 fd92e8867294becd3d47076908f4b4dd 335 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 227 246 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 APY29_RS17650 fd92e8867294becd3d47076908f4b4dd 335 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 326 6.7E-105 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 APY29_RS17650 fd92e8867294becd3d47076908f4b4dd 335 Gene3D G3DSA:3.40.718.10 1 335 1.1E-134 T 28-03-2018 APY29_RS22875 5869d61a13050cfc470a9353c944a5a8 222 SUPERFAMILY SSF46785 90 170 4.54E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS22875 5869d61a13050cfc470a9353c944a5a8 222 Pfam PF04337 Protein of unknown function, DUF480 10 154 1.3E-53 T 28-03-2018 IPR007432 Protein of unknown function DUF480 APY29_RS22875 5869d61a13050cfc470a9353c944a5a8 222 Hamap MF_01584 UPF0502 protein YceH [yceH]. 10 215 30.059 T 28-03-2018 IPR007432 Protein of unknown function DUF480 APY29_RS22875 5869d61a13050cfc470a9353c944a5a8 222 SUPERFAMILY SSF46785 8 87 2.18E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS22875 5869d61a13050cfc470a9353c944a5a8 222 Gene3D G3DSA:1.10.10.10 7 90 1.5E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS22875 5869d61a13050cfc470a9353c944a5a8 222 Gene3D G3DSA:1.10.10.10 96 167 5.6E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS07495 c962e4d071359259725c85b19d2f6a09 155 SMART SM00317 3 128 3.1E-31 T 28-03-2018 IPR001214 SET domain GO:0005515 APY29_RS07495 c962e4d071359259725c85b19d2f6a09 155 Pfam PF00856 SET domain 14 122 1.4E-19 T 28-03-2018 IPR001214 SET domain GO:0005515 APY29_RS07495 c962e4d071359259725c85b19d2f6a09 155 SUPERFAMILY SSF82199 4 148 2.49E-42 T 28-03-2018 APY29_RS07495 c962e4d071359259725c85b19d2f6a09 155 Gene3D G3DSA:2.170.270.10 1 151 1.7E-42 T 28-03-2018 APY29_RS08510 0485afaf8720fe13a6af18cfb3eb69ba 144 Pfam PF01230 HIT domain 22 108 2.2E-8 T 28-03-2018 IPR001310 Histidine triad (HIT) protein APY29_RS08510 0485afaf8720fe13a6af18cfb3eb69ba 144 SUPERFAMILY SSF54197 20 143 5.1E-29 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 APY29_RS08510 0485afaf8720fe13a6af18cfb3eb69ba 144 Gene3D G3DSA:3.30.428.10 11 144 5.4E-13 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 APY29_RS08510 0485afaf8720fe13a6af18cfb3eb69ba 144 PIRSF PIRSF000714 12 144 5.3E-48 T 28-03-2018 IPR026026 Histidine triad hydrolase, Hint-type APY29_RS22915 5a98cb519b978bd0ac44318633cd9e05 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 1.8E-33 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APY29_RS22915 5a98cb519b978bd0ac44318633cd9e05 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 246 270 - T 28-03-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 APY29_RS22915 5a98cb519b978bd0ac44318633cd9e05 271 SUPERFAMILY SSF46946 132 223 1.19E-29 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 APY29_RS22915 5a98cb519b978bd0ac44318633cd9e05 271 SUPERFAMILY SSF57716 219 270 4.56E-15 T 28-03-2018 APY29_RS22915 5a98cb519b978bd0ac44318633cd9e05 271 SMART SM00898 2 117 7.1E-55 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APY29_RS22915 5a98cb519b978bd0ac44318633cd9e05 271 Gene3D G3DSA:3.20.190.10 1 132 4.0E-38 T 28-03-2018 APY29_RS22915 5a98cb519b978bd0ac44318633cd9e05 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 270 3.4E-88 T 28-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 APY29_RS22915 5a98cb519b978bd0ac44318633cd9e05 271 SMART SM01232 131 223 3.7E-48 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APY29_RS22915 5a98cb519b978bd0ac44318633cd9e05 271 Gene3D G3DSA:1.10.8.50 133 271 9.3E-48 T 28-03-2018 APY29_RS22915 5a98cb519b978bd0ac44318633cd9e05 271 SUPERFAMILY SSF81624 2 140 8.37E-42 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APY29_RS22915 5a98cb519b978bd0ac44318633cd9e05 271 Pfam PF06827 Zinc finger found in FPG and IleRS 243 270 1.4E-6 T 28-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 APY29_RS22915 5a98cb519b978bd0ac44318633cd9e05 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 131 220 2.2E-24 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APY29_RS22915 5a98cb519b978bd0ac44318633cd9e05 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 271 43.839 T 28-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 APY29_RS03280 1e18a041a5d7356544a4565a8ac87a48 113 Pfam PF01223 DNA/RNA non-specific endonuclease 10 83 4.3E-9 T 28-03-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 APY29_RS03280 1e18a041a5d7356544a4565a8ac87a48 113 SUPERFAMILY SSF54060 7 107 2.06E-12 T 28-03-2018 APY29_RS03280 1e18a041a5d7356544a4565a8ac87a48 113 Gene3D G3DSA:3.40.570.10 2 105 3.5E-11 T 28-03-2018 APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 922 1034 9.9E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 Gene3D G3DSA:3.30.565.10 870 1036 6.3E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 SMART SM00388 810 875 6.9E-22 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 SUPERFAMILY SSF63829 306 478 3.2E-7 T 28-03-2018 APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 Pfam PF00512 His Kinase A (phospho-acceptor) domain 810 875 4.7E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 SMART SM00387 922 1036 1.9E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 SUPERFAMILY SSF63829 31 232 5.23E-23 T 28-03-2018 APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 Pfam PF00072 Response regulator receiver domain 1059 1168 3.2E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 Gene3D G3DSA:2.120.10.30 523 669 2.4E-6 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 SUPERFAMILY SSF52172 1055 1179 5.55E-33 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 Gene3D G3DSA:2.120.10.30 391 522 2.0E-10 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 SUPERFAMILY SSF55874 864 1036 4.06E-44 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 PRINTS PR00344 Bacterial sensor protein C-terminal signature 960 974 8.9E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 PRINTS PR00344 Bacterial sensor protein C-terminal signature 996 1014 8.9E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1020 1033 8.9E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 PRINTS PR00344 Bacterial sensor protein C-terminal signature 978 988 8.9E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 Pfam PF07495 Y_Y_Y domain 694 755 2.0E-15 T 28-03-2018 IPR011123 Two component regulator three Y APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 Gene3D G3DSA:1.10.287.130 800 869 5.6E-17 T 28-03-2018 APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 SMART SM00448 1057 1168 1.3E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 SUPERFAMILY SSF47384 800 876 1.02E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 Gene3D G3DSA:3.40.50.2300 1053 1181 7.6E-33 T 28-03-2018 APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 SUPERFAMILY SSF63829 410 617 1.7E-26 T 28-03-2018 APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 Pfam PF07494 Two component regulator propeller 165 188 0.0094 T 28-03-2018 IPR011110 Two component regulator propeller APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 Pfam PF07494 Two component regulator propeller 31 53 0.0026 T 28-03-2018 IPR011110 Two component regulator propeller APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 Gene3D G3DSA:2.130.10.10 159 374 2.1E-13 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS06990 8bfc4b5fa356b366481758634b063750 1181 Gene3D G3DSA:2.130.10.10 25 158 1.1E-26 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS13995 ba87ed2bab44d8f82640cb01a69c2516 558 Gene3D G3DSA:3.30.200.20 107 249 2.0E-19 T 28-03-2018 APY29_RS13995 ba87ed2bab44d8f82640cb01a69c2516 558 Gene3D G3DSA:1.10.510.10 270 357 3.8E-4 T 28-03-2018 APY29_RS13995 ba87ed2bab44d8f82640cb01a69c2516 558 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 12 446 1.8E-166 T 28-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 APY29_RS13995 ba87ed2bab44d8f82640cb01a69c2516 558 Pfam PF03109 ABC1 family 118 236 1.6E-32 T 28-03-2018 IPR004147 UbiB domain APY29_RS13995 ba87ed2bab44d8f82640cb01a69c2516 558 SUPERFAMILY SSF56112 205 436 4.67E-29 T 28-03-2018 IPR011009 Protein kinase-like domain APY29_RS13995 ba87ed2bab44d8f82640cb01a69c2516 558 SUPERFAMILY SSF56112 100 163 4.67E-29 T 28-03-2018 IPR011009 Protein kinase-like domain APY29_RS09930 fca8b0ab1fa6ce604fa6bc52e0318a27 1464 Pfam PF00270 DEAD/DEAH box helicase 24 210 5.6E-27 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APY29_RS09930 fca8b0ab1fa6ce604fa6bc52e0318a27 1464 Gene3D G3DSA:3.40.50.300 252 402 1.2E-28 T 28-03-2018 APY29_RS09930 fca8b0ab1fa6ce604fa6bc52e0318a27 1464 SUPERFAMILY SSF52540 31 212 5.78E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS09930 fca8b0ab1fa6ce604fa6bc52e0318a27 1464 SUPERFAMILY SSF52540 246 374 5.78E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS09930 fca8b0ab1fa6ce604fa6bc52e0318a27 1464 SMART SM00487 19 236 2.1E-31 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APY29_RS09930 fca8b0ab1fa6ce604fa6bc52e0318a27 1464 Pfam PF00271 Helicase conserved C-terminal domain 271 370 4.0E-17 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS09930 fca8b0ab1fa6ce604fa6bc52e0318a27 1464 Gene3D G3DSA:3.40.50.300 7 220 4.8E-36 T 28-03-2018 APY29_RS09930 fca8b0ab1fa6ce604fa6bc52e0318a27 1464 Pfam PF08494 DEAD/H associated 633 835 1.9E-51 T 28-03-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 APY29_RS09930 fca8b0ab1fa6ce604fa6bc52e0318a27 1464 Gene3D G3DSA:1.10.10.10 1175 1227 0.0011 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS09930 fca8b0ab1fa6ce604fa6bc52e0318a27 1464 SMART SM00490 290 370 3.1E-17 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS07295 d6090279f42b537a5cc1278f75d5d951 479 PRINTS PR00045 Sigma-54 factor signature 394 405 2.1E-26 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APY29_RS07295 d6090279f42b537a5cc1278f75d5d951 479 PRINTS PR00045 Sigma-54 factor signature 452 470 2.1E-26 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APY29_RS07295 d6090279f42b537a5cc1278f75d5d951 479 PRINTS PR00045 Sigma-54 factor signature 188 205 2.1E-26 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APY29_RS07295 d6090279f42b537a5cc1278f75d5d951 479 PRINTS PR00045 Sigma-54 factor signature 378 390 2.1E-26 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APY29_RS07295 d6090279f42b537a5cc1278f75d5d951 479 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 5.6E-18 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APY29_RS07295 d6090279f42b537a5cc1278f75d5d951 479 Gene3D G3DSA:1.10.10.10 325 411 4.0E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS07295 d6090279f42b537a5cc1278f75d5d951 479 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 457 464 - T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APY29_RS07295 d6090279f42b537a5cc1278f75d5d951 479 PIRSF PIRSF000774 1 479 9.6E-138 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APY29_RS07295 d6090279f42b537a5cc1278f75d5d951 479 Pfam PF04963 Sigma-54 factor, core binding domain 113 306 4.9E-50 T 28-03-2018 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 APY29_RS07295 d6090279f42b537a5cc1278f75d5d951 479 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 366 385 - T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APY29_RS07295 d6090279f42b537a5cc1278f75d5d951 479 Pfam PF04552 Sigma-54, DNA binding domain 320 477 1.1E-63 T 28-03-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding APY29_RS07295 d6090279f42b537a5cc1278f75d5d951 479 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 475 8.5E-151 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APY29_RS23335 5375d8a4c9c5b3f7a0aad5b3789b023c 446 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 15 446 5.8E-98 T 28-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 APY29_RS23335 5375d8a4c9c5b3f7a0aad5b3789b023c 446 Gene3D G3DSA:1.20.120.430 122 279 4.3E-23 T 28-03-2018 APY29_RS23335 5375d8a4c9c5b3f7a0aad5b3789b023c 446 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 220 336 1.1E-21 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 APY29_RS23335 5375d8a4c9c5b3f7a0aad5b3789b023c 446 SUPERFAMILY SSF52540 72 152 3.72E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23335 5375d8a4c9c5b3f7a0aad5b3789b023c 446 SUPERFAMILY SSF52540 188 359 3.72E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23335 5375d8a4c9c5b3f7a0aad5b3789b023c 446 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 6 446 31.375 T 28-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 APY29_RS23335 5375d8a4c9c5b3f7a0aad5b3789b023c 446 Pfam PF12631 MnmE helical domain 123 443 1.1E-48 T 28-03-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 APY29_RS23335 5375d8a4c9c5b3f7a0aad5b3789b023c 446 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 219 239 7.4E-5 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS23335 5375d8a4c9c5b3f7a0aad5b3789b023c 446 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 268 283 7.4E-5 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS23335 5375d8a4c9c5b3f7a0aad5b3789b023c 446 Pfam PF01926 50S ribosome-binding GTPase 219 311 5.1E-23 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS23335 5375d8a4c9c5b3f7a0aad5b3789b023c 446 Gene3D G3DSA:3.30.1360.120 1 121 7.5E-42 T 28-03-2018 APY29_RS23335 5375d8a4c9c5b3f7a0aad5b3789b023c 446 Pfam PF10396 GTP-binding protein TrmE N-terminus 7 120 1.7E-36 T 28-03-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 APY29_RS23335 5375d8a4c9c5b3f7a0aad5b3789b023c 446 Gene3D G3DSA:1.20.120.430 280 446 1.6E-29 T 28-03-2018 APY29_RS04245 750d942642c19fe359cb392b4e3319ff 185 Gene3D G3DSA:2.60.120.10 1 182 3.0E-71 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS04245 750d942642c19fe359cb392b4e3319ff 185 SUPERFAMILY SSF51182 1 176 9.79E-72 T 28-03-2018 IPR011051 RmlC-like cupin domain APY29_RS04245 750d942642c19fe359cb392b4e3319ff 185 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 172 2.9E-69 T 28-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APY29_RS04245 750d942642c19fe359cb392b4e3319ff 185 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 174 6.6E-78 T 28-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APY29_RS04245 750d942642c19fe359cb392b4e3319ff 185 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 175 6.0E-83 T 28-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APY29_RS14250 2e95db4d6b1cc9ce2af76fdb6bef73c5 317 Gene3D G3DSA:2.115.10.20 70 229 3.3E-13 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APY29_RS14250 2e95db4d6b1cc9ce2af76fdb6bef73c5 317 SUPERFAMILY SSF75005 68 301 9.1E-24 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APY29_RS14250 2e95db4d6b1cc9ce2af76fdb6bef73c5 317 Gene3D G3DSA:2.115.10.20 230 308 1.3E-9 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APY29_RS00140 0051a4dcb5608d2fe2683ba8343d3e5d 101 Gene3D G3DSA:3.30.420.10 1 95 6.8E-15 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS00140 0051a4dcb5608d2fe2683ba8343d3e5d 101 Pfam PF00665 Integrase core domain 1 50 1.2E-9 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 APY29_RS00140 0051a4dcb5608d2fe2683ba8343d3e5d 101 SUPERFAMILY SSF53098 1 59 7.44E-15 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS03945 a7a84f7ca82be96173d42a558c8b9112 609 SUPERFAMILY SSF56235 2 233 7.55E-71 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APY29_RS03945 a7a84f7ca82be96173d42a558c8b9112 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 1.7E-259 T 28-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 APY29_RS03945 a7a84f7ca82be96173d42a558c8b9112 609 Pfam PF13522 Glutamine amidotransferase domain 62 191 6.1E-22 T 28-03-2018 APY29_RS03945 a7a84f7ca82be96173d42a558c8b9112 609 Pfam PF01380 SIS domain 463 591 9.8E-26 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 APY29_RS03945 a7a84f7ca82be96173d42a558c8b9112 609 Pfam PF01380 SIS domain 290 416 5.9E-28 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 APY29_RS03945 a7a84f7ca82be96173d42a558c8b9112 609 SUPERFAMILY SSF53697 244 609 6.77E-109 T 28-03-2018 APY29_RS03945 a7a84f7ca82be96173d42a558c8b9112 609 Gene3D G3DSA:3.60.20.10 2 237 2.8E-66 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APY29_RS03945 a7a84f7ca82be96173d42a558c8b9112 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 39.306 T 28-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 APY29_RS03945 a7a84f7ca82be96173d42a558c8b9112 609 Gene3D G3DSA:3.40.50.10490 238 458 5.8E-57 T 28-03-2018 APY29_RS03945 a7a84f7ca82be96173d42a558c8b9112 609 Gene3D G3DSA:3.40.50.10490 459 607 4.5E-50 T 28-03-2018 APY29_RS16910 259201c18b822f06364a718033913c98 544 Pfam PF00135 Carboxylesterase family 40 528 2.0E-118 T 28-03-2018 IPR002018 Carboxylesterase, type B APY29_RS16910 259201c18b822f06364a718033913c98 544 Gene3D G3DSA:3.40.50.1820 32 543 4.1E-138 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS16910 259201c18b822f06364a718033913c98 544 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 206 221 - T 28-03-2018 IPR019826 Carboxylesterase type B, active site APY29_RS16910 259201c18b822f06364a718033913c98 544 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 110 120 - T 28-03-2018 IPR019819 Carboxylesterase type B, conserved site APY29_RS16910 259201c18b822f06364a718033913c98 544 SUPERFAMILY SSF53474 41 530 1.79E-122 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS03825 78df99a4f5cb00b02c0591b3ae817df2 591 SUPERFAMILY SSF51230 127 217 1.83E-22 T 28-03-2018 IPR011053 Single hybrid motif APY29_RS03825 78df99a4f5cb00b02c0591b3ae817df2 591 SUPERFAMILY SSF47005 283 325 6.28E-11 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 APY29_RS03825 78df99a4f5cb00b02c0591b3ae817df2 591 SUPERFAMILY SSF52777 351 591 2.36E-84 T 28-03-2018 APY29_RS03825 78df99a4f5cb00b02c0591b3ae817df2 591 Pfam PF00364 Biotin-requiring enzyme 9 77 3.0E-20 T 28-03-2018 IPR000089 Biotin/lipoyl attachment APY29_RS03825 78df99a4f5cb00b02c0591b3ae817df2 591 Pfam PF00364 Biotin-requiring enzyme 130 199 5.1E-21 T 28-03-2018 IPR000089 Biotin/lipoyl attachment APY29_RS03825 78df99a4f5cb00b02c0591b3ae817df2 591 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 150 179 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 APY29_RS03825 78df99a4f5cb00b02c0591b3ae817df2 591 Gene3D G3DSA:4.10.320.10 279 341 4.3E-17 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 APY29_RS03825 78df99a4f5cb00b02c0591b3ae817df2 591 Gene3D G3DSA:2.40.50.100 101 186 1.1E-15 T 28-03-2018 APY29_RS03825 78df99a4f5cb00b02c0591b3ae817df2 591 Pfam PF02817 e3 binding domain 287 321 1.1E-13 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 APY29_RS03825 78df99a4f5cb00b02c0591b3ae817df2 591 Gene3D G3DSA:2.40.50.100 16 62 2.0E-12 T 28-03-2018 APY29_RS03825 78df99a4f5cb00b02c0591b3ae817df2 591 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 362 590 2.6E-80 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 APY29_RS03825 78df99a4f5cb00b02c0591b3ae817df2 591 Gene3D G3DSA:2.40.50.100 63 100 4.8E-5 T 28-03-2018 APY29_RS03825 78df99a4f5cb00b02c0591b3ae817df2 591 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 APY29_RS03825 78df99a4f5cb00b02c0591b3ae817df2 591 SUPERFAMILY SSF51230 3 97 2.49E-23 T 28-03-2018 IPR011053 Single hybrid motif APY29_RS03825 78df99a4f5cb00b02c0591b3ae817df2 591 Gene3D G3DSA:3.30.559.10 349 591 8.2E-83 T 28-03-2018 APY29_RS03825 78df99a4f5cb00b02c0591b3ae817df2 591 Gene3D G3DSA:3.90.1170.30 187 227 0.057 T 28-03-2018 APY29_RS01100 30d4023881d07202634e554e9795f236 194 Pfam PF02659 Putative manganese efflux pump 31 186 1.0E-49 T 28-03-2018 IPR003810 Putative manganese efflux pump APY29_RS01100 30d4023881d07202634e554e9795f236 194 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 189 24.458 T 28-03-2018 IPR022929 Putative manganese efflux pump MntP APY29_RS17810 22906dc2e2c24b6e60599d7d0de7d0af 365 Pfam PF13531 Bacterial extracellular solute-binding protein 73 314 1.8E-42 T 28-03-2018 APY29_RS17810 22906dc2e2c24b6e60599d7d0de7d0af 365 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 44 361 3.4E-148 T 28-03-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 APY29_RS17810 22906dc2e2c24b6e60599d7d0de7d0af 365 Gene3D G3DSA:3.40.190.10 52 161 2.8E-23 T 28-03-2018 APY29_RS17810 22906dc2e2c24b6e60599d7d0de7d0af 365 Gene3D G3DSA:3.40.190.10 162 281 1.6E-22 T 28-03-2018 APY29_RS17810 22906dc2e2c24b6e60599d7d0de7d0af 365 Gene3D G3DSA:3.40.190.10 282 364 5.7E-21 T 28-03-2018 APY29_RS17810 22906dc2e2c24b6e60599d7d0de7d0af 365 SUPERFAMILY SSF53850 56 361 2.41E-84 T 28-03-2018 APY29_RS17810 22906dc2e2c24b6e60599d7d0de7d0af 365 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 179 187 - T 28-03-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 APY29_RS08320 d226608014da9bfe1e07dd9a3fb1826c 190 SUPERFAMILY SSF52972 1 185 2.81E-57 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like APY29_RS08320 d226608014da9bfe1e07dd9a3fb1826c 190 PIRSF PIRSF006305 1 190 2.0E-48 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 APY29_RS08320 d226608014da9bfe1e07dd9a3fb1826c 190 Pfam PF02545 Maf-like protein 2 186 9.3E-52 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 APY29_RS08320 d226608014da9bfe1e07dd9a3fb1826c 190 Gene3D G3DSA:3.90.950.10 1 190 2.8E-62 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like APY29_RS08320 d226608014da9bfe1e07dd9a3fb1826c 190 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 184 1.1E-47 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 APY29_RS08320 d226608014da9bfe1e07dd9a3fb1826c 190 Hamap MF_00528 Septum formation protein Maf [maf]. 1 190 28.988 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 APY29_RS21345 54819e0b9f7d4037da847dd02b0d05c1 394 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 1 389 8.1E-188 T 28-03-2018 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 APY29_RS21345 54819e0b9f7d4037da847dd02b0d05c1 394 Gene3D G3DSA:3.30.9.10 309 387 3.9E-14 T 28-03-2018 APY29_RS21345 54819e0b9f7d4037da847dd02b0d05c1 394 Gene3D G3DSA:3.30.9.10 167 283 2.1E-47 T 28-03-2018 APY29_RS21345 54819e0b9f7d4037da847dd02b0d05c1 394 SUPERFAMILY SSF54373 174 274 6.28E-44 T 28-03-2018 APY29_RS21345 54819e0b9f7d4037da847dd02b0d05c1 394 SUPERFAMILY SSF51905 1 171 4.41E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS21345 54819e0b9f7d4037da847dd02b0d05c1 394 SUPERFAMILY SSF51905 273 388 4.41E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS21345 54819e0b9f7d4037da847dd02b0d05c1 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 6.0E-28 T 28-03-2018 APY29_RS21345 54819e0b9f7d4037da847dd02b0d05c1 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 150 165 6.0E-28 T 28-03-2018 APY29_RS21345 54819e0b9f7d4037da847dd02b0d05c1 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 6.0E-28 T 28-03-2018 APY29_RS21345 54819e0b9f7d4037da847dd02b0d05c1 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 6.0E-28 T 28-03-2018 APY29_RS21345 54819e0b9f7d4037da847dd02b0d05c1 394 Pfam PF01494 FAD binding domain 2 342 9.6E-84 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 APY29_RS21345 54819e0b9f7d4037da847dd02b0d05c1 394 Gene3D G3DSA:3.50.50.60 3 166 5.3E-14 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS03095 89e3b96aa43bed0b9fcf2277715fe407 352 Gene3D G3DSA:3.40.50.2000 192 272 1.3E-4 T 28-03-2018 APY29_RS03095 89e3b96aa43bed0b9fcf2277715fe407 352 PIRSF PIRSF028458 1 352 7.2E-186 T 28-03-2018 IPR016886 Predicted glycerophosphotransferase UCP028458 APY29_RS03095 89e3b96aa43bed0b9fcf2277715fe407 352 SUPERFAMILY SSF53756 8 319 7.12E-34 T 28-03-2018 APY29_RS03095 89e3b96aa43bed0b9fcf2277715fe407 352 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 192 314 2.5E-8 T 28-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 Gene3D G3DSA:2.30.130.40 1 118 2.3E-32 T 28-03-2018 APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 11 200 3.9E-41 T 28-03-2018 IPR003111 Lon, substrate-binding domain APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 SUPERFAMILY SSF54211 610 785 5.31E-57 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 353 489 5.8E-18 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 Gene3D G3DSA:1.10.8.60 507 599 5.6E-33 T 28-03-2018 APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 PIRSF PIRSF001174 1 789 0.0 T 28-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 SMART SM00382 349 495 4.0E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 SUPERFAMILY SSF88697 10 202 2.98E-49 T 28-03-2018 IPR015947 PUA-like domain APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 Gene3D G3DSA:3.40.50.300 303 506 2.7E-31 T 28-03-2018 APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 TIGRFAM TIGR00763 lon: endopeptidase La 12 786 0.0 T 28-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 SMART SM00464 10 203 1.5E-73 T 28-03-2018 IPR003111 Lon, substrate-binding domain APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 691 699 - T 28-03-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 Hamap MF_01973 Lon protease [lon]. 11 787 72.419 T 28-03-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 Gene3D G3DSA:1.10.4060.10 122 212 2.8E-28 T 28-03-2018 APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 SUPERFAMILY SSF52540 315 603 7.22E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 741 759 2.1E-53 T 28-03-2018 APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 357 376 2.1E-53 T 28-03-2018 APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 610 626 2.1E-53 T 28-03-2018 APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 688 707 2.1E-53 T 28-03-2018 APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 718 737 2.1E-53 T 28-03-2018 APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 585 787 5.3E-94 T 28-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 APY29_RS17595 40fa83016fbcd6615fa9932efdfb125e 823 Gene3D G3DSA:3.30.230.10 600 787 2.7E-66 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APY29_RS18110 49edf732bcfd2cafdcd250c8d122390b 142 SMART SM00649 9 141 2.4E-81 T 28-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APY29_RS18110 49edf732bcfd2cafdcd250c8d122390b 142 Gene3D G3DSA:3.30.1550.10 3 72 1.3E-32 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal APY29_RS18110 49edf732bcfd2cafdcd250c8d122390b 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.3E-28 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal APY29_RS18110 49edf732bcfd2cafdcd250c8d122390b 142 Gene3D G3DSA:1.10.10.250 73 141 7.3E-24 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APY29_RS18110 49edf732bcfd2cafdcd250c8d122390b 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 72 2.0E-15 T 28-03-2018 APY29_RS18110 49edf732bcfd2cafdcd250c8d122390b 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 5.7E-64 T 28-03-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS18110 49edf732bcfd2cafdcd250c8d122390b 142 SUPERFAMILY SSF46906 68 141 3.66E-24 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APY29_RS18110 49edf732bcfd2cafdcd250c8d122390b 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.0E-23 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APY29_RS18110 49edf732bcfd2cafdcd250c8d122390b 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 28-03-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18110 49edf732bcfd2cafdcd250c8d122390b 142 SUPERFAMILY SSF54747 3 72 1.28E-28 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal APY29_RS18110 49edf732bcfd2cafdcd250c8d122390b 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.516 T 28-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APY29_RS16865 58377a4b36a7c3f45d2069ac9221e506 438 SUPERFAMILY SSF55874 293 430 2.49E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16865 58377a4b36a7c3f45d2069ac9221e506 438 SUPERFAMILY SSF47384 204 283 1.28E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS16865 58377a4b36a7c3f45d2069ac9221e506 438 SMART SM00388 221 287 2.9E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS16865 58377a4b36a7c3f45d2069ac9221e506 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 430 1.0E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16865 58377a4b36a7c3f45d2069ac9221e506 438 SMART SM00387 331 434 9.1E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16865 58377a4b36a7c3f45d2069ac9221e506 438 Gene3D G3DSA:3.30.565.10 272 438 1.8E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16865 58377a4b36a7c3f45d2069ac9221e506 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 223 284 2.6E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS16865 58377a4b36a7c3f45d2069ac9221e506 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 431 5.6E-5 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS16865 58377a4b36a7c3f45d2069ac9221e506 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 412 5.6E-5 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS16865 58377a4b36a7c3f45d2069ac9221e506 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 378 5.6E-5 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS16865 58377a4b36a7c3f45d2069ac9221e506 438 Gene3D G3DSA:1.10.287.130 207 271 1.5E-9 T 28-03-2018 APY29_RS00100 db10024f4457e3f8f705438581ff070f 213 Pfam PF07791 Protein of unknown function (DUF1629) 11 133 1.6E-55 T 28-03-2018 IPR012433 Protein of unknown function DUF1629 APY29_RS22000 8f0da8f9ba465b09a556eac1283648a2 557 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 554 49.574 T 28-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 APY29_RS22000 8f0da8f9ba465b09a556eac1283648a2 557 Gene3D G3DSA:3.30.200.20 100 246 3.4E-18 T 28-03-2018 APY29_RS22000 8f0da8f9ba465b09a556eac1283648a2 557 SUPERFAMILY SSF56112 195 439 1.28E-32 T 28-03-2018 IPR011009 Protein kinase-like domain APY29_RS22000 8f0da8f9ba465b09a556eac1283648a2 557 SUPERFAMILY SSF56112 92 160 1.28E-32 T 28-03-2018 IPR011009 Protein kinase-like domain APY29_RS22000 8f0da8f9ba465b09a556eac1283648a2 557 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 5 449 1.7E-182 T 28-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 APY29_RS22000 8f0da8f9ba465b09a556eac1283648a2 557 Pfam PF03109 ABC1 family 111 232 9.3E-30 T 28-03-2018 IPR004147 UbiB domain APY29_RS13505 449b8f856b956e24e5b1528571af0013 304 Gene3D G3DSA:3.40.190.10 119 198 4.6E-30 T 28-03-2018 APY29_RS13505 449b8f856b956e24e5b1528571af0013 304 SUPERFAMILY SSF53850 12 228 4.71E-61 T 28-03-2018 APY29_RS13505 449b8f856b956e24e5b1528571af0013 304 Pfam PF08029 HisG, C-terminal domain 230 301 7.3E-8 T 28-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 APY29_RS13505 449b8f856b956e24e5b1528571af0013 304 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 206 302 1.6E-17 T 28-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 APY29_RS13505 449b8f856b956e24e5b1528571af0013 304 Pfam PF01634 ATP phosphoribosyltransferase 60 224 2.7E-44 T 28-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 APY29_RS13505 449b8f856b956e24e5b1528571af0013 304 Gene3D G3DSA:3.30.70.120 233 303 5.3E-4 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APY29_RS13505 449b8f856b956e24e5b1528571af0013 304 Gene3D G3DSA:3.40.190.10 9 118 1.1E-26 T 28-03-2018 APY29_RS13505 449b8f856b956e24e5b1528571af0013 304 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 13 201 5.5E-54 T 28-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 APY29_RS13505 449b8f856b956e24e5b1528571af0013 304 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 162 183 - T 28-03-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 APY29_RS13505 449b8f856b956e24e5b1528571af0013 304 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 12 304 31.574 T 28-03-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 APY29_RS17605 ac86f1e142199991f71f6052ec364f9b 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 10 200 44.124 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APY29_RS17605 ac86f1e142199991f71f6052ec364f9b 208 SUPERFAMILY SSF52096 10 199 1.03E-72 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS17605 ac86f1e142199991f71f6052ec364f9b 208 Gene3D G3DSA:3.90.226.10 9 201 4.1E-46 T 28-03-2018 APY29_RS17605 ac86f1e142199991f71f6052ec364f9b 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 97 108 - T 28-03-2018 IPR018215 ClpP, Ser active site APY29_RS17605 ac86f1e142199991f71f6052ec364f9b 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 9 199 6.0E-106 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APY29_RS17605 ac86f1e142199991f71f6052ec364f9b 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 119 132 - T 28-03-2018 IPR033135 ClpP, histidine active site APY29_RS17605 ac86f1e142199991f71f6052ec364f9b 208 Pfam PF00574 Clp protease 19 199 5.9E-87 T 28-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APY29_RS17605 ac86f1e142199991f71f6052ec364f9b 208 PRINTS PR00127 Clp protease catalytic subunit P signature 26 41 4.0E-52 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APY29_RS17605 ac86f1e142199991f71f6052ec364f9b 208 PRINTS PR00127 Clp protease catalytic subunit P signature 175 194 4.0E-52 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APY29_RS17605 ac86f1e142199991f71f6052ec364f9b 208 PRINTS PR00127 Clp protease catalytic subunit P signature 66 86 4.0E-52 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APY29_RS17605 ac86f1e142199991f71f6052ec364f9b 208 PRINTS PR00127 Clp protease catalytic subunit P signature 97 114 4.0E-52 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APY29_RS17605 ac86f1e142199991f71f6052ec364f9b 208 PRINTS PR00127 Clp protease catalytic subunit P signature 118 137 4.0E-52 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APY29_RS04075 0500dce88ade74b0b651e5489fd24bfb 873 Gene3D G3DSA:2.40.170.20 169 873 4.5E-79 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS04075 0500dce88ade74b0b651e5489fd24bfb 873 Pfam PF00593 TonB dependent receptor 394 872 3.4E-51 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS04075 0500dce88ade74b0b651e5489fd24bfb 873 Gene3D G3DSA:2.170.130.10 41 168 4.7E-31 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS04075 0500dce88ade74b0b651e5489fd24bfb 873 SUPERFAMILY SSF56935 389 873 1.19E-104 T 28-03-2018 APY29_RS04075 0500dce88ade74b0b651e5489fd24bfb 873 SUPERFAMILY SSF56935 302 350 1.19E-104 T 28-03-2018 APY29_RS04075 0500dce88ade74b0b651e5489fd24bfb 873 SUPERFAMILY SSF56935 32 231 1.19E-104 T 28-03-2018 APY29_RS04075 0500dce88ade74b0b651e5489fd24bfb 873 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 163 1.4E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS18085 b8c5c8397634c105f06e07ae120e598a 1404 SUPERFAMILY SSF64484 16 945 0.0 T 28-03-2018 APY29_RS18085 b8c5c8397634c105f06e07ae120e598a 1404 SUPERFAMILY SSF64484 1134 1363 0.0 T 28-03-2018 APY29_RS18085 b8c5c8397634c105f06e07ae120e598a 1404 SMART SM00663 235 514 1.1E-183 T 28-03-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS18085 b8c5c8397634c105f06e07ae120e598a 1404 Pfam PF04997 RNA polymerase Rpb1, domain 1 17 342 1.6E-86 T 28-03-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS18085 b8c5c8397634c105f06e07ae120e598a 1404 Gene3D G3DSA:2.40.40.20 346 488 1.9E-40 T 28-03-2018 APY29_RS18085 b8c5c8397634c105f06e07ae120e598a 1404 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 7.1E-78 T 28-03-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS18085 b8c5c8397634c105f06e07ae120e598a 1404 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1377 18.945 T 28-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS18085 b8c5c8397634c105f06e07ae120e598a 1404 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.4E-18 T 28-03-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS18085 b8c5c8397634c105f06e07ae120e598a 1404 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 28-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS18085 b8c5c8397634c105f06e07ae120e598a 1404 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 1.0E-27 T 28-03-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS18085 b8c5c8397634c105f06e07ae120e598a 1404 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.5E-27 T 28-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS18085 b8c5c8397634c105f06e07ae120e598a 1404 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 3.8E-8 T 28-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS18085 b8c5c8397634c105f06e07ae120e598a 1404 Gene3D G3DSA:2.40.50.100 1023 1127 2.6E-14 T 28-03-2018 APY29_RS18085 b8c5c8397634c105f06e07ae120e598a 1404 Gene3D G3DSA:2.40.50.100 908 1022 1.1E-30 T 28-03-2018 APY29_RS18085 b8c5c8397634c105f06e07ae120e598a 1404 Gene3D G3DSA:2.40.50.100 1154 1213 4.2E-12 T 28-03-2018 APY29_RS12285 cc3e702242bb87f1ccab32c657a48938 133 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 129 9.751 T 28-03-2018 IPR022907 VapC family GO:0004540 APY29_RS12285 cc3e702242bb87f1ccab32c657a48938 133 Gene3D G3DSA:3.40.50.1010 1 133 8.0E-25 T 28-03-2018 IPR029060 PIN domain-like APY29_RS12285 cc3e702242bb87f1ccab32c657a48938 133 Pfam PF01850 PIN domain 4 122 8.4E-17 T 28-03-2018 IPR002716 PIN domain APY29_RS12285 cc3e702242bb87f1ccab32c657a48938 133 SUPERFAMILY SSF88723 1 131 1.82E-31 T 28-03-2018 IPR029060 PIN domain-like APY29_RS23400 cc3e702242bb87f1ccab32c657a48938 133 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 129 9.751 T 28-03-2018 IPR022907 VapC family GO:0004540 APY29_RS23400 cc3e702242bb87f1ccab32c657a48938 133 Gene3D G3DSA:3.40.50.1010 1 133 8.0E-25 T 28-03-2018 IPR029060 PIN domain-like APY29_RS23400 cc3e702242bb87f1ccab32c657a48938 133 Pfam PF01850 PIN domain 4 122 8.4E-17 T 28-03-2018 IPR002716 PIN domain APY29_RS23400 cc3e702242bb87f1ccab32c657a48938 133 SUPERFAMILY SSF88723 1 131 1.82E-31 T 28-03-2018 IPR029060 PIN domain-like APY29_RS08205 653670383714e99c64e80d271b2ed7ed 209 Gene3D G3DSA:3.40.190.10 92 176 1.0E-16 T 28-03-2018 APY29_RS08205 653670383714e99c64e80d271b2ed7ed 209 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS08205 653670383714e99c64e80d271b2ed7ed 209 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS08205 653670383714e99c64e80d271b2ed7ed 209 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS08205 653670383714e99c64e80d271b2ed7ed 209 Pfam PF03466 LysR substrate binding domain 95 206 9.6E-23 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS08205 653670383714e99c64e80d271b2ed7ed 209 SUPERFAMILY SSF46785 8 84 3.5E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS08205 653670383714e99c64e80d271b2ed7ed 209 SUPERFAMILY SSF53850 86 206 4.71E-22 T 28-03-2018 APY29_RS08205 653670383714e99c64e80d271b2ed7ed 209 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 1.0E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS08205 653670383714e99c64e80d271b2ed7ed 209 Gene3D G3DSA:1.10.10.10 6 91 2.0E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS08205 653670383714e99c64e80d271b2ed7ed 209 Gene3D G3DSA:3.40.190.10 177 209 5.8E-7 T 28-03-2018 APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Gene3D G3DSA:3.10.20.90 682 715 0.025 T 28-03-2018 APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Gene3D G3DSA:3.10.20.90 546 579 0.082 T 28-03-2018 APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Gene3D G3DSA:3.10.20.90 513 545 0.062 T 28-03-2018 APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Gene3D G3DSA:3.10.20.90 340 375 0.097 T 28-03-2018 APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Gene3D G3DSA:3.10.20.90 886 926 0.35 T 28-03-2018 APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Gene3D G3DSA:3.10.20.90 580 613 0.047 T 28-03-2018 APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Gene3D G3DSA:3.10.20.90 376 408 0.44 T 28-03-2018 APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Gene3D G3DSA:3.10.20.90 750 782 0.049 T 28-03-2018 APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Gene3D G3DSA:3.10.20.90 716 749 0.071 T 28-03-2018 APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Gene3D G3DSA:3.10.20.90 648 681 0.028 T 28-03-2018 APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Gene3D G3DSA:3.10.20.90 783 816 0.062 T 28-03-2018 APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Gene3D G3DSA:3.10.20.90 817 850 0.049 T 28-03-2018 APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Gene3D G3DSA:3.10.20.90 475 512 0.041 T 28-03-2018 APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Gene3D G3DSA:3.10.20.90 614 647 0.049 T 28-03-2018 APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Gene3D G3DSA:3.10.20.90 851 885 0.061 T 28-03-2018 APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Gene3D G3DSA:3.40.47.10 247 339 0.075 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Pfam PF03377 TAL effector repeat 563 592 2.8E-15 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Pfam PF03377 TAL effector repeat 391 422 4.6E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Pfam PF03377 TAL effector repeat 323 354 4.2E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Pfam PF03377 TAL effector repeat 629 660 1.2E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Pfam PF03377 TAL effector repeat 527 558 1.2E-14 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Pfam PF03377 TAL effector repeat 663 694 3.0E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Pfam PF03377 TAL effector repeat 425 456 4.6E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Pfam PF03377 TAL effector repeat 289 320 3.0E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Pfam PF03377 TAL effector repeat 731 762 1.5E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Pfam PF03377 TAL effector repeat 595 626 1.2E-14 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Pfam PF03377 TAL effector repeat 937 961 0.044 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Pfam PF03377 TAL effector repeat 867 898 6.8E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Pfam PF03377 TAL effector repeat 765 796 1.2E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Pfam PF03377 TAL effector repeat 901 930 2.5E-10 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Pfam PF03377 TAL effector repeat 357 388 8.3E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Pfam PF03377 TAL effector repeat 493 524 1.2E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Pfam PF03377 TAL effector repeat 833 864 1.2E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Pfam PF03377 TAL effector repeat 799 830 6.8E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Pfam PF03377 TAL effector repeat 697 728 3.0E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Pfam PF03377 TAL effector repeat 461 490 4.3E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23705 44a4d4f34e40ecae0d163cbaacf5db8d 1198 Gene3D G3DSA:3.40.47.10 409 473 0.019 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS17350 bceb8e9cee2e462bdf0344b0755c8e6f 538 SMART SM00382 245 388 3.4E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS17350 bceb8e9cee2e462bdf0344b0755c8e6f 538 Gene3D G3DSA:1.10.8.60 398 462 1.4E-15 T 28-03-2018 APY29_RS17350 bceb8e9cee2e462bdf0344b0755c8e6f 538 SUPERFAMILY SSF159800 21 201 1.44E-46 T 28-03-2018 APY29_RS17350 bceb8e9cee2e462bdf0344b0755c8e6f 538 TIGRFAM TIGR02329 propionate_PrpR: propionate catabolism operon regulatory protein PrpR 18 532 1.8E-235 T 28-03-2018 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0005737|GO:0019629 APY29_RS17350 bceb8e9cee2e462bdf0344b0755c8e6f 538 Pfam PF02954 Bacterial regulatory protein, Fis family 503 531 1.2E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS17350 bceb8e9cee2e462bdf0344b0755c8e6f 538 SUPERFAMILY SSF52540 226 452 7.02E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17350 bceb8e9cee2e462bdf0344b0755c8e6f 538 Gene3D G3DSA:3.40.50.300 218 396 3.4E-23 T 28-03-2018 APY29_RS17350 bceb8e9cee2e462bdf0344b0755c8e6f 538 Gene3D G3DSA:1.10.10.60 463 517 3.1E-10 T 28-03-2018 APY29_RS17350 bceb8e9cee2e462bdf0344b0755c8e6f 538 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 499 516 6.5E-5 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS17350 bceb8e9cee2e462bdf0344b0755c8e6f 538 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 516 536 6.5E-5 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS17350 bceb8e9cee2e462bdf0344b0755c8e6f 538 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 434 443 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site APY29_RS17350 bceb8e9cee2e462bdf0344b0755c8e6f 538 Gene3D G3DSA:1.10.10.10 518 536 0.0038 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS17350 bceb8e9cee2e462bdf0344b0755c8e6f 538 SUPERFAMILY SSF46689 434 530 3.14E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS17350 bceb8e9cee2e462bdf0344b0755c8e6f 538 Gene3D G3DSA:3.40.50.10660 106 186 1.1E-23 T 28-03-2018 APY29_RS17350 bceb8e9cee2e462bdf0344b0755c8e6f 538 Pfam PF00158 Sigma-54 interaction domain 226 391 2.9E-60 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APY29_RS17350 bceb8e9cee2e462bdf0344b0755c8e6f 538 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 249 262 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APY29_RS17350 bceb8e9cee2e462bdf0344b0755c8e6f 538 Pfam PF06506 Propionate catabolism activator 43 201 1.8E-44 T 28-03-2018 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 APY29_RS17350 bceb8e9cee2e462bdf0344b0755c8e6f 538 Gene3D G3DSA:3.40.50.2300 10 105 3.5E-17 T 28-03-2018 APY29_RS06570 d381a104cba30fa498abc36f7d1ecd7f 291 Gene3D G3DSA:3.30.1150.10 69 288 8.4E-24 T 28-03-2018 APY29_RS06570 d381a104cba30fa498abc36f7d1ecd7f 291 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 206 281 1.8E-18 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 APY29_RS06570 d381a104cba30fa498abc36f7d1ecd7f 291 SUPERFAMILY SSF74653 178 285 4.58E-21 T 28-03-2018 APY29_RS06570 d381a104cba30fa498abc36f7d1ecd7f 291 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 204 272 3.2E-16 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 APY29_RS08755 6e6de3ff8a3638f62ae0f59c44528060 435 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 24 435 1.8E-181 T 28-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08755 6e6de3ff8a3638f62ae0f59c44528060 435 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 138 435 3.9E-119 T 28-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08755 6e6de3ff8a3638f62ae0f59c44528060 435 Gene3D G3DSA:1.10.645.10 20 237 3.8E-62 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08755 6e6de3ff8a3638f62ae0f59c44528060 435 SUPERFAMILY SSF56762 34 435 1.7E-134 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08755 6e6de3ff8a3638f62ae0f59c44528060 435 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 17 435 48.972 T 28-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08755 6e6de3ff8a3638f62ae0f59c44528060 435 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 61 72 - T 28-03-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08755 6e6de3ff8a3638f62ae0f59c44528060 435 Gene3D G3DSA:1.10.645.10 238 428 1.7E-43 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS11795 1ab6e751ef1c532654d1d2ddf3f2b288 256 PRINTS PR01399 Enterobactin synthetase component D signature 68 88 1.5E-8 T 28-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 APY29_RS11795 1ab6e751ef1c532654d1d2ddf3f2b288 256 PRINTS PR01399 Enterobactin synthetase component D signature 183 199 1.5E-8 T 28-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 APY29_RS11795 1ab6e751ef1c532654d1d2ddf3f2b288 256 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 136 221 1.9E-10 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 APY29_RS11795 1ab6e751ef1c532654d1d2ddf3f2b288 256 Gene3D G3DSA:3.90.470.20 147 229 3.7E-7 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 APY29_RS11795 1ab6e751ef1c532654d1d2ddf3f2b288 256 SUPERFAMILY SSF56214 134 223 1.06E-11 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 APY29_RS11795 1ab6e751ef1c532654d1d2ddf3f2b288 256 Gene3D G3DSA:3.90.470.20 29 146 5.8E-14 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 APY29_RS17160 0d595ee586b7feab76813fc4e8270ebd 209 Gene3D G3DSA:1.10.10.60 7 56 4.6E-11 T 28-03-2018 APY29_RS17160 0d595ee586b7feab76813fc4e8270ebd 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 1.6E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS17160 0d595ee586b7feab76813fc4e8270ebd 209 SUPERFAMILY SSF46689 8 81 1.8E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS17160 0d595ee586b7feab76813fc4e8270ebd 209 Gene3D G3DSA:1.10.10.60 57 161 3.1E-7 T 28-03-2018 APY29_RS21995 38499ea119bc823c0292a09b11992539 167 Gene3D G3DSA:2.60.120.10 16 166 1.9E-21 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS21995 38499ea119bc823c0292a09b11992539 167 Pfam PF07883 Cupin domain 60 131 1.3E-12 T 28-03-2018 IPR013096 Cupin 2, conserved barrel APY29_RS21995 38499ea119bc823c0292a09b11992539 167 SUPERFAMILY SSF51182 30 146 8.19E-18 T 28-03-2018 IPR011051 RmlC-like cupin domain APY29_RS15115 541bceed40aca0a5eb98795c8500945f 309 Gene3D G3DSA:3.40.630.30 7 134 5.7E-19 T 28-03-2018 APY29_RS15115 541bceed40aca0a5eb98795c8500945f 309 SUPERFAMILY SSF55729 7 138 3.77E-19 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS15115 541bceed40aca0a5eb98795c8500945f 309 Pfam PF13673 Acetyltransferase (GNAT) domain 49 123 6.6E-9 T 28-03-2018 IPR000182 GNAT domain GO:0008080 APY29_RS05235 114fa3a3970da6e108d073b19b4fbcd8 442 Gene3D G3DSA:3.90.230.10 177 442 1.2E-79 T 28-03-2018 APY29_RS05235 114fa3a3970da6e108d073b19b4fbcd8 442 Pfam PF05195 Aminopeptidase P, N-terminal domain 12 131 5.6E-39 T 28-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 APY29_RS05235 114fa3a3970da6e108d073b19b4fbcd8 442 Pfam PF00557 Metallopeptidase family M24 186 417 9.0E-61 T 28-03-2018 IPR000994 Peptidase M24 APY29_RS05235 114fa3a3970da6e108d073b19b4fbcd8 442 Gene3D G3DSA:3.40.350.10 5 176 1.9E-52 T 28-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APY29_RS05235 114fa3a3970da6e108d073b19b4fbcd8 442 SUPERFAMILY SSF55920 180 438 4.45E-81 T 28-03-2018 IPR000994 Peptidase M24 APY29_RS05235 114fa3a3970da6e108d073b19b4fbcd8 442 SUPERFAMILY SSF53092 6 179 2.41E-56 T 28-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal APY29_RS05235 114fa3a3970da6e108d073b19b4fbcd8 442 SMART SM01011 7 141 4.9E-67 T 28-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 APY29_RS05235 114fa3a3970da6e108d073b19b4fbcd8 442 PRINTS PR00599 Methionine aminopeptidase-1 signature 257 273 1.9E-5 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 APY29_RS05235 114fa3a3970da6e108d073b19b4fbcd8 442 PRINTS PR00599 Methionine aminopeptidase-1 signature 375 387 1.9E-5 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 APY29_RS21930 b54226873efc08ddb32f5ea37721a9b4 318 Pfam PF03466 LysR substrate binding domain 100 301 1.1E-49 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS21930 b54226873efc08ddb32f5ea37721a9b4 318 Gene3D G3DSA:3.40.190.10 189 276 5.5E-23 T 28-03-2018 APY29_RS21930 b54226873efc08ddb32f5ea37721a9b4 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 73 2.9E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS21930 b54226873efc08ddb32f5ea37721a9b4 318 Gene3D G3DSA:3.40.190.10 99 188 4.0E-25 T 28-03-2018 APY29_RS21930 b54226873efc08ddb32f5ea37721a9b4 318 SUPERFAMILY SSF53850 102 302 7.29E-47 T 28-03-2018 APY29_RS21930 b54226873efc08ddb32f5ea37721a9b4 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 2.0E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS21930 b54226873efc08ddb32f5ea37721a9b4 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 2.0E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS21930 b54226873efc08ddb32f5ea37721a9b4 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 2.0E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS21930 b54226873efc08ddb32f5ea37721a9b4 318 Gene3D G3DSA:1.10.10.10 10 94 9.3E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS21930 b54226873efc08ddb32f5ea37721a9b4 318 SUPERFAMILY SSF46785 13 92 7.71E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS22735 f6023791747bdc2aadf93c33de56acc8 330 PRINTS PR00134 Glycosyl hydrolase family 10 signature 211 223 2.2E-5 T 28-03-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 APY29_RS22735 f6023791747bdc2aadf93c33de56acc8 330 PRINTS PR00134 Glycosyl hydrolase family 10 signature 130 141 2.2E-5 T 28-03-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 APY29_RS22735 f6023791747bdc2aadf93c33de56acc8 330 PRINTS PR00134 Glycosyl hydrolase family 10 signature 183 194 2.2E-5 T 28-03-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 APY29_RS22735 f6023791747bdc2aadf93c33de56acc8 330 PRINTS PR00134 Glycosyl hydrolase family 10 signature 89 101 2.2E-5 T 28-03-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 APY29_RS22735 f6023791747bdc2aadf93c33de56acc8 330 SUPERFAMILY SSF51445 20 325 1.1E-83 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS22735 f6023791747bdc2aadf93c33de56acc8 330 SMART SM00633 58 323 6.2E-18 T 28-03-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 APY29_RS22735 f6023791747bdc2aadf93c33de56acc8 330 Pfam PF00331 Glycosyl hydrolase family 10 40 319 1.6E-51 T 28-03-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 APY29_RS22735 f6023791747bdc2aadf93c33de56acc8 330 Gene3D G3DSA:3.20.20.80 22 327 2.2E-47 T 28-03-2018 APY29_RS15695 ef643b08759d28ca79f841915fabab22 817 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 60 817 4.4E-245 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 APY29_RS15695 ef643b08759d28ca79f841915fabab22 817 Pfam PF07244 Surface antigen variable number repeat 382 455 1.7E-15 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 APY29_RS15695 ef643b08759d28ca79f841915fabab22 817 Pfam PF07244 Surface antigen variable number repeat 62 126 1.1E-4 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 APY29_RS15695 ef643b08759d28ca79f841915fabab22 817 Pfam PF07244 Surface antigen variable number repeat 301 379 1.8E-11 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 APY29_RS15695 ef643b08759d28ca79f841915fabab22 817 Pfam PF07244 Surface antigen variable number repeat 128 207 4.2E-12 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 APY29_RS15695 ef643b08759d28ca79f841915fabab22 817 Pfam PF07244 Surface antigen variable number repeat 211 298 6.1E-11 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 APY29_RS15695 ef643b08759d28ca79f841915fabab22 817 Gene3D G3DSA:3.10.20.310 56 123 5.5E-10 T 28-03-2018 APY29_RS15695 ef643b08759d28ca79f841915fabab22 817 Pfam PF01103 Surface antigen 483 817 3.3E-91 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 APY29_RS15695 ef643b08759d28ca79f841915fabab22 817 Gene3D G3DSA:2.40.160.50 414 817 1.4E-92 T 28-03-2018 APY29_RS15695 ef643b08759d28ca79f841915fabab22 817 Gene3D G3DSA:3.10.20.310 210 301 8.6E-15 T 28-03-2018 APY29_RS15695 ef643b08759d28ca79f841915fabab22 817 Gene3D G3DSA:3.10.20.310 124 209 7.4E-17 T 28-03-2018 APY29_RS15695 ef643b08759d28ca79f841915fabab22 817 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 30 817 25.416 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 APY29_RS15695 ef643b08759d28ca79f841915fabab22 817 Gene3D G3DSA:3.10.20.310 302 381 1.5E-15 T 28-03-2018 APY29_RS15695 ef643b08759d28ca79f841915fabab22 817 PIRSF PIRSF006076 25 817 5.6E-255 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 APY29_RS08825 317a26de4988ed8a62192f6183410a7f 904 SUPERFAMILY SSF50447 806 902 8.73E-32 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain APY29_RS08825 317a26de4988ed8a62192f6183410a7f 904 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 12 902 16.779 T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 APY29_RS08825 317a26de4988ed8a62192f6183410a7f 904 SUPERFAMILY SSF46955 18 66 1.1E-8 T 28-03-2018 IPR009061 Putative DNA-binding domain APY29_RS08825 317a26de4988ed8a62192f6183410a7f 904 Gene3D G3DSA:2.40.30.10 805 903 1.7E-27 T 28-03-2018 APY29_RS08825 317a26de4988ed8a62192f6183410a7f 904 SUPERFAMILY SSF50447 576 659 3.12E-24 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain APY29_RS08825 317a26de4988ed8a62192f6183410a7f 904 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 84 119 1.9E-8 T 28-03-2018 IPR013575 Initiation factor 2 associated domain, bacterial APY29_RS08825 317a26de4988ed8a62192f6183410a7f 904 Gene3D G3DSA:3.40.50.300 398 577 1.2E-38 T 28-03-2018 APY29_RS08825 317a26de4988ed8a62192f6183410a7f 904 SUPERFAMILY SSF52156 687 811 1.02E-33 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 APY29_RS08825 317a26de4988ed8a62192f6183410a7f 904 Pfam PF00009 Elongation factor Tu GTP binding domain 408 563 3.3E-33 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APY29_RS08825 317a26de4988ed8a62192f6183410a7f 904 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 321 904 1.2E-245 T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 APY29_RS08825 317a26de4988ed8a62192f6183410a7f 904 Gene3D G3DSA:2.40.30.10 578 715 5.9E-29 T 28-03-2018 APY29_RS08825 317a26de4988ed8a62192f6183410a7f 904 Pfam PF11987 Translation-initiation factor 2 690 794 6.6E-35 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 APY29_RS08825 317a26de4988ed8a62192f6183410a7f 904 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 327 377 2.1E-14 T 28-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal APY29_RS08825 317a26de4988ed8a62192f6183410a7f 904 ProSitePatterns PS01176 Initiation factor 2 signature. 855 877 - T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 APY29_RS08825 317a26de4988ed8a62192f6183410a7f 904 Gene3D G3DSA:3.40.50.10050 716 783 3.0E-26 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 APY29_RS08825 317a26de4988ed8a62192f6183410a7f 904 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 405 562 1.7E-31 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 APY29_RS08825 317a26de4988ed8a62192f6183410a7f 904 Gene3D G3DSA:3.30.56.50 329 370 3.5E-9 T 28-03-2018 APY29_RS08825 317a26de4988ed8a62192f6183410a7f 904 Gene3D G3DSA:3.30.56.50 19 61 9.9E-5 T 28-03-2018 APY29_RS08825 317a26de4988ed8a62192f6183410a7f 904 SUPERFAMILY SSF52540 400 570 1.62E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS15090 29e3c3c8d37ba9fd4ab414852436150b 444 Pfam PF03471 Transporter associated domain 361 436 2.9E-17 T 28-03-2018 IPR005170 Transporter-associated domain APY29_RS15090 29e3c3c8d37ba9fd4ab414852436150b 444 Pfam PF01595 Domain of unknown function DUF21 13 195 2.1E-46 T 28-03-2018 IPR002550 Domain of unknown function DUF21 APY29_RS15090 29e3c3c8d37ba9fd4ab414852436150b 444 SUPERFAMILY SSF56176 360 440 1.61E-17 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APY29_RS15090 29e3c3c8d37ba9fd4ab414852436150b 444 Gene3D G3DSA:3.10.580.10 205 350 3.0E-27 T 28-03-2018 APY29_RS15090 29e3c3c8d37ba9fd4ab414852436150b 444 Gene3D G3DSA:3.30.465.10 351 437 1.0E-19 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APY29_RS15090 29e3c3c8d37ba9fd4ab414852436150b 444 SUPERFAMILY SSF54631 213 350 1.39E-24 T 28-03-2018 APY29_RS15090 29e3c3c8d37ba9fd4ab414852436150b 444 SMART SM00116 231 280 2.2 T 28-03-2018 IPR000644 CBS domain APY29_RS15090 29e3c3c8d37ba9fd4ab414852436150b 444 SMART SM00116 294 342 4.3 T 28-03-2018 IPR000644 CBS domain APY29_RS15090 29e3c3c8d37ba9fd4ab414852436150b 444 Pfam PF00571 CBS domain 222 279 1.0E-4 T 28-03-2018 IPR000644 CBS domain APY29_RS15090 29e3c3c8d37ba9fd4ab414852436150b 444 Pfam PF00571 CBS domain 293 342 4.9E-6 T 28-03-2018 IPR000644 CBS domain APY29_RS15090 29e3c3c8d37ba9fd4ab414852436150b 444 SMART SM01091 358 437 4.1E-22 T 28-03-2018 IPR005170 Transporter-associated domain APY29_RS01080 33845beb2c99dc269008f3e09247be54 784 Gene3D G3DSA:1.50.10.10 318 661 3.2E-51 T 28-03-2018 APY29_RS01080 33845beb2c99dc269008f3e09247be54 784 Pfam PF06165 Glycosyltransferase family 36 73 272 5.5E-24 T 28-03-2018 IPR010383 Glycosyl hydrolase 94 APY29_RS01080 33845beb2c99dc269008f3e09247be54 784 SUPERFAMILY SSF74650 3 274 5.65E-71 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APY29_RS01080 33845beb2c99dc269008f3e09247be54 784 Gene3D G3DSA:2.70.98.40 4 285 1.0E-59 T 28-03-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 APY29_RS01080 33845beb2c99dc269008f3e09247be54 784 Gene3D G3DSA:2.60.420.10 701 782 3.4E-15 T 28-03-2018 APY29_RS01080 33845beb2c99dc269008f3e09247be54 784 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 311 709 3.1E-59 T 28-03-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain APY29_RS01080 33845beb2c99dc269008f3e09247be54 784 SUPERFAMILY SSF48208 279 782 1.97E-77 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 APY29_RS08750 7cb184002b3974e572dea8c70639c45c 250 SUPERFAMILY SSF143243 111 219 4.45E-54 T 28-03-2018 APY29_RS08750 7cb184002b3974e572dea8c70639c45c 250 SUPERFAMILY SSF143243 8 67 4.45E-54 T 28-03-2018 APY29_RS08750 7cb184002b3974e572dea8c70639c45c 250 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 160 181 - T 28-03-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08750 7cb184002b3974e572dea8c70639c45c 250 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 33 199 1.6E-41 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08750 7cb184002b3974e572dea8c70639c45c 250 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 132 187 6.0E-27 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08750 7cb184002b3974e572dea8c70639c45c 250 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 8 207 33.418 T 28-03-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS09420 bef48db8f00c6be582729a719f5dd6b1 945 Pfam PF00593 TonB dependent receptor 370 943 8.1E-37 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS09420 bef48db8f00c6be582729a719f5dd6b1 945 SUPERFAMILY SSF56935 680 945 1.32E-81 T 28-03-2018 APY29_RS09420 bef48db8f00c6be582729a719f5dd6b1 945 SUPERFAMILY SSF56935 492 647 1.32E-81 T 28-03-2018 APY29_RS09420 bef48db8f00c6be582729a719f5dd6b1 945 SUPERFAMILY SSF56935 59 254 1.32E-81 T 28-03-2018 APY29_RS09420 bef48db8f00c6be582729a719f5dd6b1 945 SUPERFAMILY SSF56935 319 449 1.32E-81 T 28-03-2018 APY29_RS09420 bef48db8f00c6be582729a719f5dd6b1 945 Gene3D G3DSA:2.170.130.10 50 189 5.2E-30 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS09420 bef48db8f00c6be582729a719f5dd6b1 945 Pfam PF07715 TonB-dependent Receptor Plug Domain 74 189 6.5E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS09420 bef48db8f00c6be582729a719f5dd6b1 945 Gene3D G3DSA:2.40.170.20 190 945 2.2E-55 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS01085 11e988fa0664f975a9d5abcbbffd8853 880 Pfam PF15979 Glycosyl hydrolase family 115 202 543 5.1E-143 T 28-03-2018 IPR031924 Glycosyl hydrolase family 115 APY29_RS01085 11e988fa0664f975a9d5abcbbffd8853 880 Gene3D G3DSA:2.60.120.260 736 874 3.0E-5 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS01085 11e988fa0664f975a9d5abcbbffd8853 880 Gene3D G3DSA:3.30.379.10 55 182 1.5E-27 T 28-03-2018 APY29_RS07845 f9c646ee636c6f1cafa79f04019804c7 302 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 298 1.3E-97 T 28-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 APY29_RS07845 f9c646ee636c6f1cafa79f04019804c7 302 SUPERFAMILY SSF53335 8 297 1.55E-80 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS07845 f9c646ee636c6f1cafa79f04019804c7 302 Gene3D G3DSA:3.40.50.150 1 302 1.3E-82 T 28-03-2018 APY29_RS07845 f9c646ee636c6f1cafa79f04019804c7 302 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 288 40.005 T 28-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 APY29_RS09350 3cc0353f384cee158996b6db3e6b368b 444 SUPERFAMILY SSF51905 9 321 4.07E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS09350 3cc0353f384cee158996b6db3e6b368b 444 Gene3D G3DSA:3.40.50.720 155 391 3.6E-16 T 28-03-2018 APY29_RS09350 3cc0353f384cee158996b6db3e6b368b 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 3.8E-23 T 28-03-2018 APY29_RS09350 3cc0353f384cee158996b6db3e6b368b 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 3.8E-23 T 28-03-2018 APY29_RS09350 3cc0353f384cee158996b6db3e6b368b 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 17 36 3.8E-23 T 28-03-2018 APY29_RS09350 3cc0353f384cee158996b6db3e6b368b 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 264 3.8E-23 T 28-03-2018 APY29_RS09350 3cc0353f384cee158996b6db3e6b368b 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 278 300 3.8E-23 T 28-03-2018 APY29_RS09350 3cc0353f384cee158996b6db3e6b368b 444 PIRSF PIRSF037495 8 443 7.3E-109 T 28-03-2018 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 APY29_RS09350 3cc0353f384cee158996b6db3e6b368b 444 Gene3D G3DSA:3.50.50.60 12 154 4.7E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS09350 3cc0353f384cee158996b6db3e6b368b 444 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 15 302 1.6E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS09350 3cc0353f384cee158996b6db3e6b368b 444 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 148 172 1.5E-15 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS09350 3cc0353f384cee158996b6db3e6b368b 444 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 288 306 1.5E-15 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS09350 3cc0353f384cee158996b6db3e6b368b 444 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 16 38 1.5E-15 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS09350 3cc0353f384cee158996b6db3e6b368b 444 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 1.5E-15 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APY29_RS01735 f73f1a5724613964d9f22c55a03e30c9 275 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 141 157 - T 28-03-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0006730|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 APY29_RS01735 f73f1a5724613964d9f22c55a03e30c9 275 Pfam PF00194 Eukaryotic-type carbonic anhydrase 51 270 2.6E-47 T 28-03-2018 IPR001148 Alpha carbonic anhydrase APY29_RS01735 f73f1a5724613964d9f22c55a03e30c9 275 SUPERFAMILY SSF51069 50 271 1.43E-71 T 28-03-2018 IPR001148 Alpha carbonic anhydrase APY29_RS01735 f73f1a5724613964d9f22c55a03e30c9 275 SMART SM01057 52 275 1.1E-95 T 28-03-2018 IPR001148 Alpha carbonic anhydrase APY29_RS01735 f73f1a5724613964d9f22c55a03e30c9 275 Gene3D G3DSA:3.10.200.10 48 273 4.6E-66 T 28-03-2018 IPR001148 Alpha carbonic anhydrase APY29_RS00045 8214b8223bc1d5609f779510896c78ad 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 118 236 7.7E-37 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APY29_RS09995 b5f47976a9da70791eeccab446e59191 133 Pfam PF00816 H-NS histone family 17 111 2.4E-17 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 APY29_RS09995 b5f47976a9da70791eeccab446e59191 133 SUPERFAMILY SSF81273 81 111 3.84E-6 T 28-03-2018 APY29_RS09995 b5f47976a9da70791eeccab446e59191 133 SMART SM00528 78 121 8.2E-18 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 APY29_RS09995 b5f47976a9da70791eeccab446e59191 133 Gene3D G3DSA:4.10.430.10 84 113 8.2E-9 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 APY29_RS10530 7ca767f9e8f0b1f5071ee7e6a8ef1ee9 99 Pfam PF03795 YCII-related domain 2 95 9.8E-26 T 28-03-2018 IPR005545 YCII-related APY29_RS10530 7ca767f9e8f0b1f5071ee7e6a8ef1ee9 99 SUPERFAMILY SSF54909 2 97 4.29E-30 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel APY29_RS10530 7ca767f9e8f0b1f5071ee7e6a8ef1ee9 99 Gene3D G3DSA:3.30.70.1060 2 98 7.5E-27 T 28-03-2018 APY29_RS04550 1cae3fa07448e752cc7949878ed806c9 279 Pfam PF00535 Glycosyl transferase family 2 8 146 1.7E-19 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 APY29_RS04550 1cae3fa07448e752cc7949878ed806c9 279 SUPERFAMILY SSF53448 4 252 1.86E-43 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS04550 1cae3fa07448e752cc7949878ed806c9 279 Gene3D G3DSA:3.90.550.10 1 254 3.9E-38 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS14790 aff22f3da64b9c9dd0876713142fade9 318 Gene3D G3DSA:3.40.50.1000 169 309 1.1E-20 T 28-03-2018 IPR023214 HAD-like domain APY29_RS14790 aff22f3da64b9c9dd0876713142fade9 318 Pfam PF06189 5'-nucleotidase 39 316 1.3E-106 T 28-03-2018 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821|Reactome: R-HSA-74259 APY29_RS09325 80a6110056c101115636bdef47f2b252 543 Pfam PF02881 SRP54-type protein, helical bundle domain 254 316 5.6E-11 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 APY29_RS09325 80a6110056c101115636bdef47f2b252 543 SMART SM00382 336 516 1.8E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS09325 80a6110056c101115636bdef47f2b252 543 Gene3D G3DSA:1.20.120.140 260 332 1.0E-16 T 28-03-2018 APY29_RS09325 80a6110056c101115636bdef47f2b252 543 SUPERFAMILY SSF52540 289 533 4.47E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS09325 80a6110056c101115636bdef47f2b252 543 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 265 538 62.675 T 28-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 APY29_RS09325 80a6110056c101115636bdef47f2b252 543 SMART SM00962 337 538 1.5E-109 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 APY29_RS09325 80a6110056c101115636bdef47f2b252 543 Pfam PF00448 SRP54-type protein, GTPase domain 337 537 1.4E-72 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 APY29_RS09325 80a6110056c101115636bdef47f2b252 543 SMART SM00963 243 322 7.8E-19 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 APY29_RS09325 80a6110056c101115636bdef47f2b252 543 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 511 524 - T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 APY29_RS09325 80a6110056c101115636bdef47f2b252 543 Gene3D G3DSA:3.40.50.300 336 539 2.3E-36 T 28-03-2018 APY29_RS09325 80a6110056c101115636bdef47f2b252 543 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 265 537 1.3E-99 T 28-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 APY29_RS10855 af6b6ea7f13a4d92185deca97262ce0e 194 SMART SM00479 10 183 3.4E-13 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III APY29_RS10855 af6b6ea7f13a4d92185deca97262ce0e 194 Gene3D G3DSA:3.30.420.10 6 181 1.7E-26 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS10855 af6b6ea7f13a4d92185deca97262ce0e 194 Hamap MF_00045 Oligoribonuclease [orn]. 6 184 41.071 T 28-03-2018 IPR022894 Oligoribonuclease GO:0000175 APY29_RS10855 af6b6ea7f13a4d92185deca97262ce0e 194 SUPERFAMILY SSF53098 7 181 1.93E-45 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS10855 af6b6ea7f13a4d92185deca97262ce0e 194 Pfam PF00929 Exonuclease 12 173 1.9E-26 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III APY29_RS19070 983163eb5a6e6d56d1de38f108888720 622 SUPERFAMILY SSF56519 57 224 1.29E-46 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APY29_RS19070 983163eb5a6e6d56d1de38f108888720 622 Pfam PF03717 Penicillin-binding Protein dimerisation domain 62 209 4.9E-20 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APY29_RS19070 983163eb5a6e6d56d1de38f108888720 622 Pfam PF00905 Penicillin binding protein transpeptidase domain 250 546 9.7E-81 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APY29_RS19070 983163eb5a6e6d56d1de38f108888720 622 Gene3D G3DSA:3.40.710.10 226 573 5.1E-88 T 28-03-2018 APY29_RS19070 983163eb5a6e6d56d1de38f108888720 622 SUPERFAMILY SSF56601 177 572 1.62E-95 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like APY29_RS19070 983163eb5a6e6d56d1de38f108888720 622 Gene3D G3DSA:3.90.1310.10 30 225 6.1E-48 T 28-03-2018 APY29_RS10685 52a31b5885c3a4eb716627342cd5f7b0 75 SUPERFAMILY SSF46955 9 61 1.03E-6 T 28-03-2018 IPR009061 Putative DNA-binding domain APY29_RS10685 52a31b5885c3a4eb716627342cd5f7b0 75 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 9 57 3.9E-16 T 28-03-2018 IPR010260 DNA-binding transcriptional activator AlpA APY29_RS10685 52a31b5885c3a4eb716627342cd5f7b0 75 Gene3D G3DSA:1.10.10.10 10 69 2.2E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS14590 eec20f5db2165721b2fcfffae2e7905b 228 Pfam PF11218 Protein of unknown function (DUF3011) 30 225 9.5E-89 T 28-03-2018 IPR021381 Protein of unknown function DUF3011 APY29_RS10005 763617dc4acb9c36bf1d83a2b2e5623e 872 Pfam PF04679 ATP dependent DNA ligase C terminal region 428 522 6.9E-17 T 28-03-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 APY29_RS10005 763617dc4acb9c36bf1d83a2b2e5623e 872 SUPERFAMILY SSF50249 413 528 1.88E-22 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS10005 763617dc4acb9c36bf1d83a2b2e5623e 872 Gene3D G3DSA:3.30.1490.70 356 399 2.8E-10 T 28-03-2018 APY29_RS10005 763617dc4acb9c36bf1d83a2b2e5623e 872 SUPERFAMILY SSF56091 225 409 1.34E-44 T 28-03-2018 APY29_RS10005 763617dc4acb9c36bf1d83a2b2e5623e 872 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 3 158 9.4E-71 T 28-03-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain APY29_RS10005 763617dc4acb9c36bf1d83a2b2e5623e 872 Gene3D G3DSA:3.30.470.30 199 355 4.3E-33 T 28-03-2018 APY29_RS10005 763617dc4acb9c36bf1d83a2b2e5623e 872 Gene3D G3DSA:2.40.50.140 400 524 3.4E-26 T 28-03-2018 APY29_RS10005 763617dc4acb9c36bf1d83a2b2e5623e 872 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 229 526 1.6E-83 T 28-03-2018 IPR014146 DNA ligase D, ligase domain APY29_RS10005 763617dc4acb9c36bf1d83a2b2e5623e 872 Pfam PF13298 DNA polymerase Ligase (LigD) 35 139 1.6E-34 T 28-03-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain APY29_RS10005 763617dc4acb9c36bf1d83a2b2e5623e 872 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 586 828 1.7E-90 T 28-03-2018 IPR014145 DNA ligase D, polymerase domain APY29_RS10005 763617dc4acb9c36bf1d83a2b2e5623e 872 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 238 857 2.9E-175 T 28-03-2018 IPR014143 DNA ligase D APY29_RS10005 763617dc4acb9c36bf1d83a2b2e5623e 872 Pfam PF01068 ATP dependent DNA ligase domain 229 409 5.4E-25 T 28-03-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 APY29_RS10425 e9014ab873434e75a625f75346e2c93f 540 PIRSF PIRSF006446 366 515 7.2E-34 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 APY29_RS10425 e9014ab873434e75a625f75346e2c93f 540 PIRSF PIRSF006446 2 320 7.8E-111 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 APY29_RS10425 e9014ab873434e75a625f75346e2c93f 540 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 503 4.2E-174 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 APY29_RS07420 de6fb67262792c9cf34722dc5620d771 580 Pfam PF00258 Flavodoxin 80 205 3.2E-26 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APY29_RS07420 de6fb67262792c9cf34722dc5620d771 580 Pfam PF00175 Oxidoreductase NAD-binding domain 448 551 8.2E-11 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APY29_RS07420 de6fb67262792c9cf34722dc5620d771 580 Gene3D G3DSA:2.40.30.10 226 430 2.3E-12 T 28-03-2018 APY29_RS07420 de6fb67262792c9cf34722dc5620d771 580 PRINTS PR00369 Flavodoxin signature 127 138 1.7E-10 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APY29_RS07420 de6fb67262792c9cf34722dc5620d771 580 PRINTS PR00369 Flavodoxin signature 183 202 1.7E-10 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APY29_RS07420 de6fb67262792c9cf34722dc5620d771 580 PRINTS PR00369 Flavodoxin signature 79 92 1.7E-10 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APY29_RS07420 de6fb67262792c9cf34722dc5620d771 580 PRINTS PR00369 Flavodoxin signature 159 169 1.7E-10 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APY29_RS07420 de6fb67262792c9cf34722dc5620d771 580 SUPERFAMILY SSF63380 226 438 1.21E-13 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APY29_RS07420 de6fb67262792c9cf34722dc5620d771 580 Gene3D G3DSA:3.40.50.360 62 225 2.3E-29 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS07420 de6fb67262792c9cf34722dc5620d771 580 Gene3D G3DSA:3.40.50.80 434 579 3.1E-21 T 28-03-2018 APY29_RS07420 de6fb67262792c9cf34722dc5620d771 580 SUPERFAMILY SSF52218 76 219 2.72E-36 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS07420 de6fb67262792c9cf34722dc5620d771 580 SUPERFAMILY SSF52343 437 580 1.57E-33 T 28-03-2018 APY29_RS07420 de6fb67262792c9cf34722dc5620d771 580 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 471 480 8.1E-9 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APY29_RS07420 de6fb67262792c9cf34722dc5620d771 580 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 447 466 8.1E-9 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APY29_RS07420 de6fb67262792c9cf34722dc5620d771 580 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 383 390 8.1E-9 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APY29_RS07420 de6fb67262792c9cf34722dc5620d771 580 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 539 547 8.1E-9 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APY29_RS07420 de6fb67262792c9cf34722dc5620d771 580 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 484 495 8.1E-9 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APY29_RS22850 1421be5f2fab498afdde12ff03ba4ecf 1011 Gene3D G3DSA:2.60.40.1120 31 125 7.0E-7 T 28-03-2018 APY29_RS22850 1421be5f2fab498afdde12ff03ba4ecf 1011 SUPERFAMILY SSF49452 31 105 7.65E-8 T 28-03-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 APY29_RS22850 1421be5f2fab498afdde12ff03ba4ecf 1011 Gene3D G3DSA:2.170.130.10 126 257 1.1E-9 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS22850 1421be5f2fab498afdde12ff03ba4ecf 1011 Gene3D G3DSA:2.40.170.20 279 1011 1.1E-51 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS22850 1421be5f2fab498afdde12ff03ba4ecf 1011 SUPERFAMILY SSF56935 111 589 1.1E-61 T 28-03-2018 APY29_RS22850 1421be5f2fab498afdde12ff03ba4ecf 1011 SUPERFAMILY SSF56935 729 903 1.1E-61 T 28-03-2018 APY29_RS22850 1421be5f2fab498afdde12ff03ba4ecf 1011 SUPERFAMILY SSF56935 628 668 1.1E-61 T 28-03-2018 APY29_RS22850 1421be5f2fab498afdde12ff03ba4ecf 1011 SUPERFAMILY SSF56935 931 1011 1.1E-61 T 28-03-2018 APY29_RS22850 1421be5f2fab498afdde12ff03ba4ecf 1011 Pfam PF00593 TonB dependent receptor 405 982 7.7E-17 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS10925 2f59e5b1edb642bb133726301bb78360 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APY29_RS10925 2f59e5b1edb642bb133726301bb78360 252 Gene3D G3DSA:3.40.50.720 1 252 5.8E-60 T 28-03-2018 APY29_RS10925 2f59e5b1edb642bb133726301bb78360 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 250 2.9E-46 T 28-03-2018 APY29_RS10925 2f59e5b1edb642bb133726301bb78360 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 5.7E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS10925 2f59e5b1edb642bb133726301bb78360 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 5.7E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS10925 2f59e5b1edb642bb133726301bb78360 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 5.7E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS10925 2f59e5b1edb642bb133726301bb78360 252 SUPERFAMILY SSF51735 4 251 2.0E-67 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS10925 2f59e5b1edb642bb133726301bb78360 252 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 2 252 2.7E-109 T 28-03-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 APY29_RS10925 2f59e5b1edb642bb133726301bb78360 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 1.6E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS10925 2f59e5b1edb642bb133726301bb78360 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.6E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS10925 2f59e5b1edb642bb133726301bb78360 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.6E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS10925 2f59e5b1edb642bb133726301bb78360 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.6E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS10925 2f59e5b1edb642bb133726301bb78360 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.6E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS10925 2f59e5b1edb642bb133726301bb78360 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.6E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS14560 beed334bb1f8355ce73d919fd562e21a 555 Pfam PF17391 Urocanase N-terminal domain 10 136 4.3E-60 T 28-03-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 APY29_RS14560 beed334bb1f8355ce73d919fd562e21a 555 Gene3D G3DSA:3.40.1770.10 8 150 1.0E-27 T 28-03-2018 APY29_RS14560 beed334bb1f8355ce73d919fd562e21a 555 Gene3D G3DSA:3.40.1770.10 194 553 9.4E-161 T 28-03-2018 APY29_RS14560 beed334bb1f8355ce73d919fd562e21a 555 ProSitePatterns PS01233 Urocanase signature. 440 455 - T 28-03-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 APY29_RS14560 beed334bb1f8355ce73d919fd562e21a 555 PIRSF PIRSF001423 1 555 1.7E-286 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 APY29_RS14560 beed334bb1f8355ce73d919fd562e21a 555 Pfam PF17392 Urocanase C-terminal domain 350 544 4.1E-92 T 28-03-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 APY29_RS14560 beed334bb1f8355ce73d919fd562e21a 555 Hamap MF_00577 Urocanate hydratase [hutU]. 3 554 49.712 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 APY29_RS14560 beed334bb1f8355ce73d919fd562e21a 555 TIGRFAM TIGR01228 hutU: urocanate hydratase 9 551 3.0E-284 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 APY29_RS14560 beed334bb1f8355ce73d919fd562e21a 555 SUPERFAMILY SSF111326 4 552 1.57E-256 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 APY29_RS14560 beed334bb1f8355ce73d919fd562e21a 555 Pfam PF01175 Urocanase Rossmann-like domain 139 347 8.5E-84 T 28-03-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 APY29_RS11400 d1f356853b24e47dccf3a606deb49c13 138 ProSitePatterns PS00893 Nudix box signature. 34 55 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APY29_RS11400 d1f356853b24e47dccf3a606deb49c13 138 SUPERFAMILY SSF55811 4 122 1.49E-30 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 APY29_RS11400 d1f356853b24e47dccf3a606deb49c13 138 Pfam PF00293 NUDIX domain 4 111 5.4E-19 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 APY29_RS11400 d1f356853b24e47dccf3a606deb49c13 138 PRINTS PR00502 NUDIX hydrolase family signature 29 43 8.3E-8 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 APY29_RS11400 d1f356853b24e47dccf3a606deb49c13 138 PRINTS PR00502 NUDIX hydrolase family signature 43 58 8.3E-8 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 APY29_RS11400 d1f356853b24e47dccf3a606deb49c13 138 Gene3D G3DSA:3.90.79.10 2 125 2.9E-26 T 28-03-2018 APY29_RS19540 7a22a6960b2284b594ea5cbdc896f2e9 394 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 83 322 2.3E-42 T 28-03-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 APY29_RS19540 7a22a6960b2284b594ea5cbdc896f2e9 394 SUPERFAMILY SSF53335 21 379 3.88E-84 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS19540 7a22a6960b2284b594ea5cbdc896f2e9 394 Gene3D G3DSA:3.40.50.150 50 382 1.8E-10 T 28-03-2018 APY29_RS05440 0aa184b92fc9386a621f08303fbebf1c 391 Gene3D G3DSA:3.20.20.190 43 347 1.0E-24 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APY29_RS05440 0aa184b92fc9386a621f08303fbebf1c 391 Pfam PF16670 Phosphoinositide phospholipase C, Ca2+-dependent 49 377 3.1E-130 T 28-03-2018 IPR032075 Phosphoinositide phospholipase C, Ca2+-dependent APY29_RS05440 0aa184b92fc9386a621f08303fbebf1c 391 SUPERFAMILY SSF51695 49 112 4.19E-26 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APY29_RS05440 0aa184b92fc9386a621f08303fbebf1c 391 SUPERFAMILY SSF51695 145 319 4.19E-26 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APY29_RS08055 8731cd47dab1355893724e3e426d51e6 133 SUPERFAMILY SSF161084 6 131 7.46E-27 T 28-03-2018 APY29_RS08055 8731cd47dab1355893724e3e426d51e6 133 Pfam PF01124 MAPEG family 10 126 7.6E-21 T 28-03-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein APY29_RS08055 8731cd47dab1355893724e3e426d51e6 133 Gene3D G3DSA:1.20.120.550 3 133 1.5E-20 T 28-03-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain APY29_RS11435 2d82d0971c8a5aee5c5eca895e4dfe04 254 SUPERFAMILY SSF52833 62 229 3.55E-27 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS11435 2d82d0971c8a5aee5c5eca895e4dfe04 254 Pfam PF13462 Thioredoxin 65 209 1.4E-14 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS11435 2d82d0971c8a5aee5c5eca895e4dfe04 254 Gene3D G3DSA:3.40.30.10 62 240 1.0E-23 T 28-03-2018 APY29_RS07985 4873aa09e6e18ceeee125ad962ae8628 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 79 98 1.0E-17 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS07985 4873aa09e6e18ceeee125ad962ae8628 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 122 135 1.0E-17 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS07985 4873aa09e6e18ceeee125ad962ae8628 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 372 388 1.0E-17 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS07985 4873aa09e6e18ceeee125ad962ae8628 592 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 373 383 - T 28-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site APY29_RS07985 4873aa09e6e18ceeee125ad962ae8628 592 Pfam PF01483 Proprotein convertase P-domain 499 586 2.1E-16 T 28-03-2018 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 APY29_RS07985 4873aa09e6e18ceeee125ad962ae8628 592 SUPERFAMILY SSF52743 330 337 6.94E-67 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS07985 4873aa09e6e18ceeee125ad962ae8628 592 SUPERFAMILY SSF52743 366 457 6.94E-67 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS07985 4873aa09e6e18ceeee125ad962ae8628 592 SUPERFAMILY SSF52743 36 302 6.94E-67 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS07985 4873aa09e6e18ceeee125ad962ae8628 592 SUPERFAMILY SSF49785 489 586 2.76E-15 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS07985 4873aa09e6e18ceeee125ad962ae8628 592 Gene3D G3DSA:3.40.50.200 27 457 6.5E-63 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS07985 4873aa09e6e18ceeee125ad962ae8628 592 Gene3D G3DSA:2.60.120.260 458 588 4.5E-17 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS07985 4873aa09e6e18ceeee125ad962ae8628 592 Pfam PF00082 Subtilase family 347 445 2.3E-11 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS07985 4873aa09e6e18ceeee125ad962ae8628 592 Pfam PF00082 Subtilase family 79 293 1.6E-19 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS07985 4873aa09e6e18ceeee125ad962ae8628 592 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 126 136 - T 28-03-2018 IPR022398 Peptidase S8, subtilisin, His-active site APY29_RS07985 4873aa09e6e18ceeee125ad962ae8628 592 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 84 95 - T 28-03-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site APY29_RS11290 dfb1de67ee0de488a9dfa539959cb117 170 Gene3D G3DSA:1.20.58.430 17 145 5.3E-5 T 28-03-2018 APY29_RS05005 ba08be3ff0ec1b3a9c8ce2608b13173d 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 250 266 3.0E-44 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS05005 ba08be3ff0ec1b3a9c8ce2608b13173d 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 377 395 3.0E-44 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS05005 ba08be3ff0ec1b3a9c8ce2608b13173d 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 432 447 3.0E-44 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS05005 ba08be3ff0ec1b3a9c8ce2608b13173d 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 456 473 3.0E-44 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS05005 ba08be3ff0ec1b3a9c8ce2608b13173d 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 63 88 3.0E-44 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS05005 ba08be3ff0ec1b3a9c8ce2608b13173d 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 134 152 3.0E-44 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS05005 ba08be3ff0ec1b3a9c8ce2608b13173d 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 401 419 3.0E-44 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS05005 ba08be3ff0ec1b3a9c8ce2608b13173d 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 152 171 3.0E-44 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS05005 ba08be3ff0ec1b3a9c8ce2608b13173d 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 279 298 3.0E-44 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS05005 ba08be3ff0ec1b3a9c8ce2608b13173d 569 SUPERFAMILY SSF56235 30 569 4.24E-178 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APY29_RS05005 ba08be3ff0ec1b3a9c8ce2608b13173d 569 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 42 561 5.1E-118 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS05005 ba08be3ff0ec1b3a9c8ce2608b13173d 569 Pfam PF01019 Gamma-glutamyltranspeptidase 56 564 1.5E-160 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS22505 32cfd41b0b95967e7210d17a4a448d91 604 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 419 433 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APY29_RS22505 32cfd41b0b95967e7210d17a4a448d91 604 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 80 174 8.3E-15 T 28-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 APY29_RS22505 32cfd41b0b95967e7210d17a4a448d91 604 Pfam PF00437 Type II/IV secretion system protein 230 491 2.6E-76 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APY29_RS22505 32cfd41b0b95967e7210d17a4a448d91 604 SMART SM00382 352 473 4.6E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS22505 32cfd41b0b95967e7210d17a4a448d91 604 SUPERFAMILY SSF52540 213 599 4.01E-95 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS22505 32cfd41b0b95967e7210d17a4a448d91 604 SUPERFAMILY SSF160246 81 169 7.85E-13 T 28-03-2018 APY29_RS22505 32cfd41b0b95967e7210d17a4a448d91 604 Gene3D G3DSA:3.30.450.90 196 324 3.5E-44 T 28-03-2018 APY29_RS22505 32cfd41b0b95967e7210d17a4a448d91 604 Gene3D G3DSA:3.40.50.300 326 604 1.0E-60 T 28-03-2018 APY29_RS21210 9e861ba4467c9f221c2906590bec5f47 301 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 71 224 4.4E-48 T 28-03-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 APY29_RS21210 9e861ba4467c9f221c2906590bec5f47 301 Gene3D G3DSA:2.60.120.330 62 239 1.5E-44 T 28-03-2018 IPR027443 Isopenicillin N synthase-like APY29_RS21210 9e861ba4467c9f221c2906590bec5f47 301 SUPERFAMILY SSF51197 81 230 2.25E-21 T 28-03-2018 APY29_RS08215 057a8970b801771b6f0f0bc31a8f04d3 323 Gene3D G3DSA:2.40.100.10 48 277 3.9E-33 T 28-03-2018 IPR029000 Cyclophilin-like domain APY29_RS08215 057a8970b801771b6f0f0bc31a8f04d3 323 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 71 239 1.0E-25 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APY29_RS08215 057a8970b801771b6f0f0bc31a8f04d3 323 SUPERFAMILY SSF50891 183 284 3.94E-27 T 28-03-2018 IPR029000 Cyclophilin-like domain APY29_RS08215 057a8970b801771b6f0f0bc31a8f04d3 323 SUPERFAMILY SSF50891 70 146 3.94E-27 T 28-03-2018 IPR029000 Cyclophilin-like domain APY29_RS14010 e53c16832c68d974fd86a07ef396d613 92 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.333 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 APY29_RS14010 e53c16832c68d974fd86a07ef396d613 92 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 9.7E-30 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 APY29_RS14010 e53c16832c68d974fd86a07ef396d613 92 Gene3D G3DSA:2.30.30.100 4 72 1.7E-32 T 28-03-2018 APY29_RS14010 e53c16832c68d974fd86a07ef396d613 92 Pfam PF17209 Hfq protein 7 68 8.1E-31 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 APY29_RS14010 e53c16832c68d974fd86a07ef396d613 92 SUPERFAMILY SSF50182 7 68 6.93E-24 T 28-03-2018 IPR010920 LSM domain APY29_RS12650 513d76a46c6fdbf2fe70b5ee4f32c88e 103 Pfam PF04316 Anti-sigma-28 factor, FlgM 42 96 6.1E-14 T 28-03-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal APY29_RS12650 513d76a46c6fdbf2fe70b5ee4f32c88e 103 Gene3D G3DSA:1.10.287.1160 70 96 2.4E-8 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 APY29_RS12650 513d76a46c6fdbf2fe70b5ee4f32c88e 103 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 97 7.3E-19 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 APY29_RS12650 513d76a46c6fdbf2fe70b5ee4f32c88e 103 SUPERFAMILY SSF101498 4 97 7.32E-14 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 APY29_RS19985 0c3b4d9a0e967156bcaa56fb34648751 256 Pfam PF01904 Protein of unknown function DUF72 35 250 1.5E-49 T 28-03-2018 IPR002763 Protein of unknown function DUF72 APY29_RS19985 0c3b4d9a0e967156bcaa56fb34648751 256 Gene3D G3DSA:3.20.20.410 5 256 2.7E-68 T 28-03-2018 IPR002763 Protein of unknown function DUF72 APY29_RS19985 0c3b4d9a0e967156bcaa56fb34648751 256 SUPERFAMILY SSF117396 11 253 2.22E-68 T 28-03-2018 IPR002763 Protein of unknown function DUF72 APY29_RS04240 9d7bf1a2a89582d63bd2b8152be58949 295 SUPERFAMILY SSF53448 4 289 2.48E-91 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS04240 9d7bf1a2a89582d63bd2b8152be58949 295 Gene3D G3DSA:3.90.550.10 5 293 1.5E-68 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS04240 9d7bf1a2a89582d63bd2b8152be58949 295 Pfam PF00483 Nucleotidyl transferase 5 241 8.1E-71 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 APY29_RS04240 9d7bf1a2a89582d63bd2b8152be58949 295 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 290 8.7E-156 T 28-03-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 APY29_RS09125 c10690750ede7507127b1ff8aef5b319 792 SMART SM00874 402 470 1.4E-27 T 28-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 APY29_RS09125 c10690750ede7507127b1ff8aef5b319 792 SUPERFAMILY SSF55681 466 683 1.94E-48 T 28-03-2018 APY29_RS09125 c10690750ede7507127b1ff8aef5b319 792 Pfam PF03483 B3/4 domain 212 384 1.6E-63 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 APY29_RS09125 c10690750ede7507127b1ff8aef5b319 792 SUPERFAMILY SSF56037 195 392 3.14E-68 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APY29_RS09125 c10690750ede7507127b1ff8aef5b319 792 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 3.0E-228 T 28-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APY29_RS09125 c10690750ede7507127b1ff8aef5b319 792 Gene3D G3DSA:3.50.40.10 196 393 5.4E-67 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APY29_RS09125 c10690750ede7507127b1ff8aef5b319 792 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 43.827 T 28-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APY29_RS09125 c10690750ede7507127b1ff8aef5b319 792 Gene3D G3DSA:3.30.56.10 402 474 7.4E-23 T 28-03-2018 APY29_RS09125 c10690750ede7507127b1ff8aef5b319 792 SUPERFAMILY SSF50249 36 190 7.35E-43 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS09125 c10690750ede7507127b1ff8aef5b319 792 Gene3D G3DSA:3.30.930.10 489 687 1.0E-39 T 28-03-2018 APY29_RS09125 c10690750ede7507127b1ff8aef5b319 792 SMART SM00873 211 384 6.2E-85 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 APY29_RS09125 c10690750ede7507127b1ff8aef5b319 792 Gene3D G3DSA:3.30.56.10 1 186 2.9E-47 T 28-03-2018 APY29_RS09125 c10690750ede7507127b1ff8aef5b319 792 SUPERFAMILY SSF46955 402 474 2.93E-18 T 28-03-2018 IPR009061 Putative DNA-binding domain APY29_RS09125 c10690750ede7507127b1ff8aef5b319 792 SUPERFAMILY SSF54991 694 791 1.44E-26 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 APY29_RS09125 c10690750ede7507127b1ff8aef5b319 792 Pfam PF01588 Putative tRNA binding domain 45 144 2.5E-24 T 28-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 APY29_RS09125 c10690750ede7507127b1ff8aef5b319 792 Pfam PF03484 tRNA synthetase B5 domain 405 470 8.1E-18 T 28-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 APY29_RS09125 c10690750ede7507127b1ff8aef5b319 792 Gene3D G3DSA:3.30.70.380 695 791 2.5E-22 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 APY29_RS09125 c10690750ede7507127b1ff8aef5b319 792 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 791 5.5E-25 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 APY29_RS09125 c10690750ede7507127b1ff8aef5b319 792 SMART SM00896 698 791 1.7E-37 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 APY29_RS16435 9758b17f161dc92c8a2de10becc0dce5 148 PRINTS PR00421 Thioredoxin family signature 69 78 1.8E-7 T 28-03-2018 APY29_RS16435 9758b17f161dc92c8a2de10becc0dce5 148 PRINTS PR00421 Thioredoxin family signature 109 120 1.8E-7 T 28-03-2018 APY29_RS16435 9758b17f161dc92c8a2de10becc0dce5 148 PRINTS PR00421 Thioredoxin family signature 61 69 1.8E-7 T 28-03-2018 APY29_RS16435 9758b17f161dc92c8a2de10becc0dce5 148 SUPERFAMILY SSF52833 30 146 9.98E-35 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS16435 9758b17f161dc92c8a2de10becc0dce5 148 Gene3D G3DSA:3.40.30.10 111 148 0.0056 T 28-03-2018 APY29_RS16435 9758b17f161dc92c8a2de10becc0dce5 148 Pfam PF00085 Thioredoxin 44 142 2.5E-24 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 APY29_RS16435 9758b17f161dc92c8a2de10becc0dce5 148 ProSitePatterns PS00194 Thioredoxin family active site. 62 80 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 APY29_RS16435 9758b17f161dc92c8a2de10becc0dce5 148 Gene3D G3DSA:3.40.30.10 42 110 7.0E-23 T 28-03-2018 APY29_RS16435 9758b17f161dc92c8a2de10becc0dce5 148 PIRSF PIRSF000077 40 145 1.1E-25 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APY29_RS10520 5dc5a4eb3fcc5cb2758b8a28a0b2140c 436 SUPERFAMILY SSF46785 26 107 7.48E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS10520 5dc5a4eb3fcc5cb2758b8a28a0b2140c 436 Pfam PF04079 Segregation and condensation complex subunit ScpB 33 194 8.7E-51 T 28-03-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 APY29_RS10520 5dc5a4eb3fcc5cb2758b8a28a0b2140c 436 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 33 196 3.9E-34 T 28-03-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 APY29_RS10520 5dc5a4eb3fcc5cb2758b8a28a0b2140c 436 SUPERFAMILY SSF46785 110 185 7.78E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS10520 5dc5a4eb3fcc5cb2758b8a28a0b2140c 436 Gene3D G3DSA:1.10.10.10 110 202 6.2E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS10520 5dc5a4eb3fcc5cb2758b8a28a0b2140c 436 Gene3D G3DSA:1.10.10.10 20 109 1.6E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS18100 2bf2da8ad5c299ea129faa2a50e0ec6a 177 Pfam PF00466 Ribosomal protein L10 6 101 7.8E-23 T 28-03-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 APY29_RS18100 2bf2da8ad5c299ea129faa2a50e0ec6a 177 SUPERFAMILY SSF160369 4 160 3.4E-43 T 28-03-2018 APY29_RS18100 2bf2da8ad5c299ea129faa2a50e0ec6a 177 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 25.149 T 28-03-2018 IPR022973 Ribosomal protein L10 APY29_RS06305 1bfb0935ff0adde7f592bf17c3cb3771 588 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 32.765 T 28-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 APY29_RS06305 1bfb0935ff0adde7f592bf17c3cb3771 588 Gene3D G3DSA:3.30.930.10 134 324 2.0E-51 T 28-03-2018 APY29_RS06305 1bfb0935ff0adde7f592bf17c3cb3771 588 Gene3D G3DSA:3.30.930.10 370 586 3.2E-55 T 28-03-2018 APY29_RS06305 1bfb0935ff0adde7f592bf17c3cb3771 588 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 3.1E-226 T 28-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 APY29_RS06305 1bfb0935ff0adde7f592bf17c3cb3771 588 Pfam PF01336 OB-fold nucleic acid binding domain 18 105 8.7E-13 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APY29_RS06305 1bfb0935ff0adde7f592bf17c3cb3771 588 Gene3D G3DSA:2.40.50.140 1 111 2.5E-21 T 28-03-2018 APY29_RS06305 1bfb0935ff0adde7f592bf17c3cb3771 588 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 558 7.2E-106 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS06305 1bfb0935ff0adde7f592bf17c3cb3771 588 SUPERFAMILY SSF55681 115 295 1.59E-104 T 28-03-2018 APY29_RS06305 1bfb0935ff0adde7f592bf17c3cb3771 588 SUPERFAMILY SSF55681 424 585 1.59E-104 T 28-03-2018 APY29_RS06305 1bfb0935ff0adde7f592bf17c3cb3771 588 SUPERFAMILY SSF50249 1 112 1.05E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS06305 1bfb0935ff0adde7f592bf17c3cb3771 588 Pfam PF02938 GAD domain 311 405 2.4E-26 T 28-03-2018 IPR029351 GAD domain Reactome: R-HSA-379726 APY29_RS06305 1bfb0935ff0adde7f592bf17c3cb3771 588 SUPERFAMILY SSF55261 294 420 6.98E-41 T 28-03-2018 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 APY29_RS06305 1bfb0935ff0adde7f592bf17c3cb3771 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 6.3E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS06305 1bfb0935ff0adde7f592bf17c3cb3771 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 6.3E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS06305 1bfb0935ff0adde7f592bf17c3cb3771 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 6.3E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS06305 1bfb0935ff0adde7f592bf17c3cb3771 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 6.3E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS17310 79dc475fa8ebed42d0dee335c54840f8 738 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 162 6.4E-10 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS17310 79dc475fa8ebed42d0dee335c54840f8 738 SUPERFAMILY SSF56935 34 738 2.2E-94 T 28-03-2018 APY29_RS17310 79dc475fa8ebed42d0dee335c54840f8 738 Pfam PF00593 TonB dependent receptor 264 735 9.7E-38 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS17310 79dc475fa8ebed42d0dee335c54840f8 738 Gene3D G3DSA:2.40.170.20 173 738 1.3E-61 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS17310 79dc475fa8ebed42d0dee335c54840f8 738 Gene3D G3DSA:2.170.130.10 30 172 5.9E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS00225 3e511b6a58791b906136a75566c5dc7f 357 SUPERFAMILY SSF51445 43 346 2.92E-78 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS00225 3e511b6a58791b906136a75566c5dc7f 357 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 47 321 2.0E-51 T 28-03-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 APY29_RS00225 3e511b6a58791b906136a75566c5dc7f 357 Gene3D G3DSA:3.20.20.80 39 352 5.0E-55 T 28-03-2018 APY29_RS00225 3e511b6a58791b906136a75566c5dc7f 357 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 167 176 - T 28-03-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 APY29_RS09515 1bc0fb95ad4b518809d1401f7e431767 586 SUPERFAMILY SSF81296 29 125 7.7E-19 T 28-03-2018 IPR014756 Immunoglobulin E-set APY29_RS09515 1bc0fb95ad4b518809d1401f7e431767 586 Pfam PF00759 Glycosyl hydrolase family 9 130 577 3.2E-92 T 28-03-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APY29_RS09515 1bc0fb95ad4b518809d1401f7e431767 586 Pfam PF02927 Cellulase N-terminal ig-like domain 34 117 1.0E-17 T 28-03-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 APY29_RS09515 1bc0fb95ad4b518809d1401f7e431767 586 SUPERFAMILY SSF48208 128 581 7.65E-121 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 APY29_RS09515 1bc0fb95ad4b518809d1401f7e431767 586 ProSitePatterns PS00698 Glycosyl hydrolases family 9 active sites signature 2. 554 572 - T 28-03-2018 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APY29_RS09515 1bc0fb95ad4b518809d1401f7e431767 586 Gene3D G3DSA:1.50.10.10 128 586 1.4E-109 T 28-03-2018 APY29_RS09515 1bc0fb95ad4b518809d1401f7e431767 586 Gene3D G3DSA:2.60.40.10 31 126 2.0E-18 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS09515 1bc0fb95ad4b518809d1401f7e431767 586 ProSitePatterns PS00592 Glycosyl hydrolases family 9 active sites signature 1. 496 512 - T 28-03-2018 IPR018221 Glycoside hydrolase family 9, His active site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APY29_RS22255 fa69591adc1d337706ae7079d33f67f3 190 SMART SM00867 25 185 3.5E-23 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APY29_RS22255 fa69591adc1d337706ae7079d33f67f3 190 Gene3D G3DSA:2.40.128.110 21 189 2.7E-25 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APY29_RS22255 fa69591adc1d337706ae7079d33f67f3 190 Pfam PF04264 YceI-like domain 28 180 8.9E-22 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APY29_RS22255 fa69591adc1d337706ae7079d33f67f3 190 SUPERFAMILY SSF101874 28 185 5.49E-28 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APY29_RS14810 23d18007b227fe3d9ab800e357c785a5 537 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS14810 23d18007b227fe3d9ab800e357c785a5 537 SUPERFAMILY SSF52540 18 222 2.79E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS14810 23d18007b227fe3d9ab800e357c785a5 537 SMART SM00382 30 359 2.1E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS14810 23d18007b227fe3d9ab800e357c785a5 537 SMART SM00382 364 531 1.8E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS14810 23d18007b227fe3d9ab800e357c785a5 537 Gene3D G3DSA:3.40.50.300 3 322 2.0E-41 T 28-03-2018 APY29_RS14810 23d18007b227fe3d9ab800e357c785a5 537 Pfam PF00005 ABC transporter 358 485 1.6E-16 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS14810 23d18007b227fe3d9ab800e357c785a5 537 Pfam PF00005 ABC transporter 32 171 5.1E-17 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS14810 23d18007b227fe3d9ab800e357c785a5 537 Gene3D G3DSA:3.40.50.300 341 524 1.0E-32 T 28-03-2018 APY29_RS14810 23d18007b227fe3d9ab800e357c785a5 537 SUPERFAMILY SSF52540 357 518 1.1E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS22900 af09435c4d40053eeb81875228621e4b 414 SMART SM00388 182 247 3.1E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS22900 af09435c4d40053eeb81875228621e4b 414 SUPERFAMILY SSF55874 259 399 1.08E-12 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS22900 af09435c4d40053eeb81875228621e4b 414 Pfam PF01590 GAF domain 24 154 6.3E-7 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS22900 af09435c4d40053eeb81875228621e4b 414 Gene3D G3DSA:3.30.450.40 19 159 9.7E-18 T 28-03-2018 IPR029016 GAF domain-like APY29_RS22900 af09435c4d40053eeb81875228621e4b 414 SMART SM00065 16 163 3.3E-8 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS22900 af09435c4d40053eeb81875228621e4b 414 SUPERFAMILY SSF47384 175 243 1.79E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS22900 af09435c4d40053eeb81875228621e4b 414 SUPERFAMILY SSF55781 23 161 9.08E-19 T 28-03-2018 IPR029016 GAF domain-like APY29_RS22900 af09435c4d40053eeb81875228621e4b 414 Pfam PF00512 His Kinase A (phospho-acceptor) domain 183 243 3.5E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS22900 af09435c4d40053eeb81875228621e4b 414 Gene3D G3DSA:3.30.565.10 257 406 3.5E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS22900 af09435c4d40053eeb81875228621e4b 414 Gene3D G3DSA:1.10.287.130 160 243 2.7E-8 T 28-03-2018 APY29_RS16490 32787c1887e852d5b793be9f72b8d7f5 656 PIRSF PIRSF002583 24 642 6.5E-103 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APY29_RS16490 32787c1887e852d5b793be9f72b8d7f5 656 SUPERFAMILY SSF54211 253 492 2.58E-32 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS16490 32787c1887e852d5b793be9f72b8d7f5 656 Pfam PF00183 Hsp90 protein 312 391 2.8E-8 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APY29_RS16490 32787c1887e852d5b793be9f72b8d7f5 656 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 68 200 4.5E-10 T 28-03-2018 APY29_RS16490 32787c1887e852d5b793be9f72b8d7f5 656 PRINTS PR00775 90kDa heat shock protein signature 222 240 3.3E-14 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal APY29_RS16490 32787c1887e852d5b793be9f72b8d7f5 656 PRINTS PR00775 90kDa heat shock protein signature 68 90 3.3E-14 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal APY29_RS16490 32787c1887e852d5b793be9f72b8d7f5 656 PRINTS PR00775 90kDa heat shock protein signature 152 174 3.3E-14 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal APY29_RS16490 32787c1887e852d5b793be9f72b8d7f5 656 PRINTS PR00775 90kDa heat shock protein signature 204 221 3.3E-14 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal APY29_RS16490 32787c1887e852d5b793be9f72b8d7f5 656 SUPERFAMILY SSF55874 48 242 1.08E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16490 32787c1887e852d5b793be9f72b8d7f5 656 Gene3D G3DSA:3.30.565.10 71 248 1.7E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS13240 f5a514745150b8bb0242fdc73754dc82 923 Pfam PF00694 Aconitase C-terminal domain 715 846 1.4E-44 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS13240 f5a514745150b8bb0242fdc73754dc82 923 Pfam PF00330 Aconitase family (aconitate hydratase) 67 585 1.9E-181 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS13240 f5a514745150b8bb0242fdc73754dc82 923 SUPERFAMILY SSF53732 3 649 6.41E-224 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS13240 f5a514745150b8bb0242fdc73754dc82 923 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 17 916 0.0 T 28-03-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 APY29_RS13240 f5a514745150b8bb0242fdc73754dc82 923 PRINTS PR00415 Aconitase family signature 215 230 5.6E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS13240 f5a514745150b8bb0242fdc73754dc82 923 PRINTS PR00415 Aconitase family signature 291 304 5.6E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS13240 f5a514745150b8bb0242fdc73754dc82 923 PRINTS PR00415 Aconitase family signature 454 465 5.6E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS13240 f5a514745150b8bb0242fdc73754dc82 923 PRINTS PR00415 Aconitase family signature 168 176 5.6E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS13240 f5a514745150b8bb0242fdc73754dc82 923 PRINTS PR00415 Aconitase family signature 277 290 5.6E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS13240 f5a514745150b8bb0242fdc73754dc82 923 PRINTS PR00415 Aconitase family signature 371 385 5.6E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS13240 f5a514745150b8bb0242fdc73754dc82 923 PRINTS PR00415 Aconitase family signature 144 157 5.6E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS13240 f5a514745150b8bb0242fdc73754dc82 923 PRINTS PR00415 Aconitase family signature 201 214 5.6E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS13240 f5a514745150b8bb0242fdc73754dc82 923 PRINTS PR00415 Aconitase family signature 516 529 5.6E-41 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS13240 f5a514745150b8bb0242fdc73754dc82 923 ProSitePatterns PS00450 Aconitase family signature 1. 450 466 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 APY29_RS13240 f5a514745150b8bb0242fdc73754dc82 923 Gene3D G3DSA:3.20.19.10 676 918 1.0E-90 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APY29_RS13240 f5a514745150b8bb0242fdc73754dc82 923 SUPERFAMILY SSF52016 654 916 1.65E-83 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APY29_RS13240 f5a514745150b8bb0242fdc73754dc82 923 Gene3D G3DSA:3.30.499.10 34 237 1.6E-71 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS13240 f5a514745150b8bb0242fdc73754dc82 923 ProSitePatterns PS01244 Aconitase family signature 2. 516 529 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 APY29_RS13240 f5a514745150b8bb0242fdc73754dc82 923 Gene3D G3DSA:3.40.1060.10 238 370 4.2E-45 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS13240 f5a514745150b8bb0242fdc73754dc82 923 Gene3D G3DSA:3.30.499.10 371 599 2.9E-66 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 APY29_RS08415 0d39aed45d3c86e7256a5d34b9abc15c 180 Gene3D G3DSA:2.30.260.10 104 179 4.1E-18 T 28-03-2018 APY29_RS08415 0d39aed45d3c86e7256a5d34b9abc15c 180 Pfam PF00877 NlpC/P60 family 70 175 1.1E-27 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain APY29_RS08415 0d39aed45d3c86e7256a5d34b9abc15c 180 SUPERFAMILY SSF54001 47 179 1.28E-39 T 28-03-2018 APY29_RS08415 0d39aed45d3c86e7256a5d34b9abc15c 180 Gene3D G3DSA:3.90.1720.10 27 103 2.2E-15 T 28-03-2018 APY29_RS22190 c7e8054527e62ae83a3c9c42498b2966 351 SMART SM00387 228 341 9.0E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS22190 c7e8054527e62ae83a3c9c42498b2966 351 SUPERFAMILY SSF47384 119 182 4.51E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS22190 c7e8054527e62ae83a3c9c42498b2966 351 SUPERFAMILY SSF55874 192 338 3.67E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS22190 c7e8054527e62ae83a3c9c42498b2966 351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 228 339 2.3E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS22190 c7e8054527e62ae83a3c9c42498b2966 351 Gene3D G3DSA:3.30.450.20 9 109 2.2E-7 T 28-03-2018 APY29_RS22190 c7e8054527e62ae83a3c9c42498b2966 351 SUPERFAMILY SSF55785 10 72 1.64E-7 T 28-03-2018 IPR000014 PAS domain APY29_RS22190 c7e8054527e62ae83a3c9c42498b2966 351 Pfam PF00512 His Kinase A (phospho-acceptor) domain 123 182 9.0E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS22190 c7e8054527e62ae83a3c9c42498b2966 351 SMART SM00388 122 189 4.5E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS22190 c7e8054527e62ae83a3c9c42498b2966 351 Gene3D G3DSA:1.10.287.130 116 183 1.2E-12 T 28-03-2018 APY29_RS22190 c7e8054527e62ae83a3c9c42498b2966 351 Gene3D G3DSA:3.30.565.10 189 350 1.8E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS22190 c7e8054527e62ae83a3c9c42498b2966 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 338 2.8E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS22190 c7e8054527e62ae83a3c9c42498b2966 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 320 2.8E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS22190 c7e8054527e62ae83a3c9c42498b2966 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 273 287 2.8E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS10625 9e443a4cfcbd1b4e078edf4d5e101d21 103 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 APY29_RS10625 9e443a4cfcbd1b4e078edf4d5e101d21 103 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.3E-18 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APY29_RS10625 9e443a4cfcbd1b4e078edf4d5e101d21 103 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.3E-18 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APY29_RS10625 9e443a4cfcbd1b4e078edf4d5e101d21 103 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.3E-18 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APY29_RS10625 9e443a4cfcbd1b4e078edf4d5e101d21 103 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.005 T 28-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 APY29_RS10625 9e443a4cfcbd1b4e078edf4d5e101d21 103 SUPERFAMILY SSF47729 1 91 3.53E-30 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APY29_RS10625 9e443a4cfcbd1b4e078edf4d5e101d21 103 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 1.6E-42 T 28-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 APY29_RS10625 9e443a4cfcbd1b4e078edf4d5e101d21 103 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.1E-28 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APY29_RS10625 9e443a4cfcbd1b4e078edf4d5e101d21 103 Gene3D G3DSA:4.10.520.10 1 94 2.1E-30 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APY29_RS10625 9e443a4cfcbd1b4e078edf4d5e101d21 103 SMART SM00411 1 91 1.3E-39 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APY29_RS12040 23e0f57ca83b997db98c3330b5d92eef 911 SMART SM00869 642 900 2.0E-27 T 28-03-2018 IPR005546 Autotransporter beta-domain APY29_RS12040 23e0f57ca83b997db98c3330b5d92eef 911 SUPERFAMILY SSF103515 638 911 8.37E-34 T 28-03-2018 IPR005546 Autotransporter beta-domain APY29_RS12040 23e0f57ca83b997db98c3330b5d92eef 911 Gene3D G3DSA:2.40.128.130 541 911 1.2E-28 T 28-03-2018 APY29_RS12040 23e0f57ca83b997db98c3330b5d92eef 911 Pfam PF03797 Autotransporter beta-domain 646 889 9.2E-27 T 28-03-2018 IPR005546 Autotransporter beta-domain APY29_RS12040 23e0f57ca83b997db98c3330b5d92eef 911 Pfam PF12951 Passenger-associated-transport-repeat 400 429 7.4E-11 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12040 23e0f57ca83b997db98c3330b5d92eef 911 Pfam PF00082 Subtilase family 89 360 7.3E-38 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS12040 23e0f57ca83b997db98c3330b5d92eef 911 Gene3D G3DSA:3.40.50.200 54 373 8.3E-49 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS12040 23e0f57ca83b997db98c3330b5d92eef 911 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 468 911 5.0E-5 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 APY29_RS12040 23e0f57ca83b997db98c3330b5d92eef 911 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 399 429 3.7E-11 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS12040 23e0f57ca83b997db98c3330b5d92eef 911 SUPERFAMILY SSF52743 77 373 1.06E-47 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS12040 23e0f57ca83b997db98c3330b5d92eef 911 PRINTS PR00723 Subtilisin serine protease family (S8) signature 89 108 1.0E-5 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS12040 23e0f57ca83b997db98c3330b5d92eef 911 PRINTS PR00723 Subtilisin serine protease family (S8) signature 309 325 1.0E-5 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS12040 23e0f57ca83b997db98c3330b5d92eef 911 PRINTS PR00723 Subtilisin serine protease family (S8) signature 131 144 1.0E-5 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS01215 df5a4d9f14d90598854d78651282856d 294 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 186 207 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 APY29_RS01215 df5a4d9f14d90598854d78651282856d 294 Gene3D G3DSA:3.10.50.40 132 270 6.8E-25 T 28-03-2018 APY29_RS01215 df5a4d9f14d90598854d78651282856d 294 SUPERFAMILY SSF54534 141 250 1.37E-21 T 28-03-2018 APY29_RS01215 df5a4d9f14d90598854d78651282856d 294 Pfam PF13616 PPIC-type PPIASE domain 139 248 1.5E-16 T 28-03-2018 APY29_RS01215 df5a4d9f14d90598854d78651282856d 294 SUPERFAMILY SSF109998 62 155 9.42E-6 T 28-03-2018 IPR027304 Trigger factor/SurA domain APY29_RS15040 939f7f5309c0ae5e09fdbadcf22b7628 323 Gene3D G3DSA:1.10.287.460 111 204 3.3E-14 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 APY29_RS15040 939f7f5309c0ae5e09fdbadcf22b7628 323 Gene3D G3DSA:3.10.50.40 205 322 1.5E-38 T 28-03-2018 APY29_RS15040 939f7f5309c0ae5e09fdbadcf22b7628 323 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 232 318 1.7E-25 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain APY29_RS15040 939f7f5309c0ae5e09fdbadcf22b7628 323 Gene3D G3DSA:1.10.287.460 29 110 4.2E-10 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 APY29_RS15040 939f7f5309c0ae5e09fdbadcf22b7628 323 SUPERFAMILY SSF54534 161 322 3.93E-50 T 28-03-2018 APY29_RS15040 939f7f5309c0ae5e09fdbadcf22b7628 323 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 131 223 1.7E-19 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 APY29_RS15040 939f7f5309c0ae5e09fdbadcf22b7628 323 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 40 113 3.2E-9 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 APY29_RS16675 2b69ea7273dfc812fbb094509f544d96 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 286 6.5E-100 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 APY29_RS16675 2b69ea7273dfc812fbb094509f544d96 316 Gene3D G3DSA:3.40.50.1220 10 294 1.3E-4 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain APY29_RS16675 2b69ea7273dfc812fbb094509f544d96 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 38.833 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 APY29_RS16675 2b69ea7273dfc812fbb094509f544d96 316 Pfam PF02401 LytB protein 3 284 5.4E-92 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 APY29_RS07385 358efd25cee55c410ff67c348820fd11 236 Pfam PF00483 Nucleotidyl transferase 2 119 1.4E-13 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 APY29_RS07385 358efd25cee55c410ff67c348820fd11 236 Gene3D G3DSA:3.90.550.10 1 234 2.0E-36 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS07385 358efd25cee55c410ff67c348820fd11 236 SUPERFAMILY SSF53448 2 230 8.79E-50 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS17410 cf8d72115ec199624bb17ec0309208e7 325 SUPERFAMILY SSF53901 7 325 4.47E-75 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS17410 cf8d72115ec199624bb17ec0309208e7 325 Gene3D G3DSA:3.40.47.10 2 164 2.1E-41 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS17410 cf8d72115ec199624bb17ec0309208e7 325 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 5 325 72.278 T 28-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 APY29_RS17410 cf8d72115ec199624bb17ec0309208e7 325 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 187 1.7E-35 T 28-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 APY29_RS17410 cf8d72115ec199624bb17ec0309208e7 325 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 236 325 5.2E-38 T 28-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 APY29_RS17410 cf8d72115ec199624bb17ec0309208e7 325 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 6 324 4.6E-135 T 28-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 APY29_RS17410 cf8d72115ec199624bb17ec0309208e7 325 Gene3D G3DSA:3.40.47.10 165 325 3.0E-44 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS04220 fa0aa722aece8f978da2c42f5633ecc8 242 Gene3D G3DSA:3.40.50.720 49 229 1.9E-14 T 28-03-2018 APY29_RS04220 fa0aa722aece8f978da2c42f5633ecc8 242 SUPERFAMILY SSF51735 56 196 9.13E-15 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS08585 3336397bbb7305beab5f962e1cd30fe2 206 Gene3D G3DSA:3.90.79.10 3 201 7.0E-32 T 28-03-2018 APY29_RS08585 3336397bbb7305beab5f962e1cd30fe2 206 Pfam PF00293 NUDIX domain 51 171 2.0E-8 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 APY29_RS08585 3336397bbb7305beab5f962e1cd30fe2 206 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 194 2.5E-42 T 28-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 APY29_RS08585 3336397bbb7305beab5f962e1cd30fe2 206 SUPERFAMILY SSF55811 12 196 6.63E-45 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 APY29_RS08040 0c557f79a46b5e852ed8e52301405e9f 408 SUPERFAMILY SSF52096 116 270 7.56E-11 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS08040 0c557f79a46b5e852ed8e52301405e9f 408 Gene3D G3DSA:3.90.226.10 118 271 1.2E-4 T 28-03-2018 APY29_RS19315 bfbb9c89ab9dd52912b95ca75942264c 366 SUPERFAMILY SSF53756 113 329 1.76E-18 T 28-03-2018 APY29_RS19315 bfbb9c89ab9dd52912b95ca75942264c 366 Gene3D G3DSA:3.40.50.2000 168 339 3.8E-17 T 28-03-2018 APY29_RS19315 bfbb9c89ab9dd52912b95ca75942264c 366 Pfam PF00534 Glycosyl transferases group 1 222 285 1.1E-6 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 APY29_RS04080 4458010a52ca2a5caeef806d2f4375dc 765 Pfam PF02225 PA domain 157 229 7.0E-11 T 28-03-2018 IPR003137 PA domain APY29_RS04080 4458010a52ca2a5caeef806d2f4375dc 765 Gene3D G3DSA:3.40.630.10 323 578 3.4E-33 T 28-03-2018 APY29_RS04080 4458010a52ca2a5caeef806d2f4375dc 765 Gene3D G3DSA:1.20.930.40 584 759 3.5E-27 T 28-03-2018 IPR007365 Transferrin receptor-like, dimerisation domain APY29_RS04080 4458010a52ca2a5caeef806d2f4375dc 765 SUPERFAMILY SSF47672 582 610 2.62E-27 T 28-03-2018 IPR007365 Transferrin receptor-like, dimerisation domain APY29_RS04080 4458010a52ca2a5caeef806d2f4375dc 765 SUPERFAMILY SSF47672 640 757 2.62E-27 T 28-03-2018 IPR007365 Transferrin receptor-like, dimerisation domain APY29_RS04080 4458010a52ca2a5caeef806d2f4375dc 765 Pfam PF04253 Transferrin receptor-like dimerisation domain 644 753 3.6E-20 T 28-03-2018 IPR007365 Transferrin receptor-like, dimerisation domain APY29_RS04080 4458010a52ca2a5caeef806d2f4375dc 765 SUPERFAMILY SSF53187 59 99 6.86E-59 T 28-03-2018 APY29_RS04080 4458010a52ca2a5caeef806d2f4375dc 765 SUPERFAMILY SSF53187 322 581 6.86E-59 T 28-03-2018 APY29_RS04080 4458010a52ca2a5caeef806d2f4375dc 765 SUPERFAMILY SSF52025 105 340 4.45E-71 T 28-03-2018 APY29_RS04080 4458010a52ca2a5caeef806d2f4375dc 765 Pfam PF04389 Peptidase family M28 338 549 1.5E-17 T 28-03-2018 IPR007484 Peptidase M28 APY29_RS04080 4458010a52ca2a5caeef806d2f4375dc 765 Gene3D G3DSA:3.50.30.30 111 322 9.1E-68 T 28-03-2018 APY29_RS09305 97ed1d1eda52d7f3ebaf1ba8f7722ced 540 SUPERFAMILY SSF52172 415 534 2.13E-27 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS09305 97ed1d1eda52d7f3ebaf1ba8f7722ced 540 Gene3D G3DSA:3.30.450.20 16 153 9.1E-29 T 28-03-2018 APY29_RS09305 97ed1d1eda52d7f3ebaf1ba8f7722ced 540 Pfam PF13426 PAS domain 49 143 2.5E-21 T 28-03-2018 IPR000014 PAS domain APY29_RS09305 97ed1d1eda52d7f3ebaf1ba8f7722ced 540 Gene3D G3DSA:3.40.50.2300 414 538 7.4E-25 T 28-03-2018 APY29_RS09305 97ed1d1eda52d7f3ebaf1ba8f7722ced 540 Gene3D G3DSA:1.10.287.130 154 226 1.4E-6 T 28-03-2018 APY29_RS09305 97ed1d1eda52d7f3ebaf1ba8f7722ced 540 SMART SM00388 160 230 3.5E-4 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS09305 97ed1d1eda52d7f3ebaf1ba8f7722ced 540 SMART SM00387 271 396 3.2E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS09305 97ed1d1eda52d7f3ebaf1ba8f7722ced 540 Gene3D G3DSA:3.30.565.10 229 396 6.0E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS09305 97ed1d1eda52d7f3ebaf1ba8f7722ced 540 Pfam PF00072 Response regulator receiver domain 418 530 1.9E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS09305 97ed1d1eda52d7f3ebaf1ba8f7722ced 540 SMART SM00091 28 97 3.7E-5 T 28-03-2018 IPR000014 PAS domain APY29_RS09305 97ed1d1eda52d7f3ebaf1ba8f7722ced 540 SMART SM00448 416 529 1.2E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS09305 97ed1d1eda52d7f3ebaf1ba8f7722ced 540 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 277 394 4.8E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS09305 97ed1d1eda52d7f3ebaf1ba8f7722ced 540 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 27 152 1.5E-17 T 28-03-2018 IPR000014 PAS domain APY29_RS09305 97ed1d1eda52d7f3ebaf1ba8f7722ced 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 339 7.6E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS09305 97ed1d1eda52d7f3ebaf1ba8f7722ced 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 374 7.6E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS09305 97ed1d1eda52d7f3ebaf1ba8f7722ced 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 353 7.6E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS09305 97ed1d1eda52d7f3ebaf1ba8f7722ced 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 393 7.6E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS09305 97ed1d1eda52d7f3ebaf1ba8f7722ced 540 SMART SM00086 103 145 2.5E-8 T 28-03-2018 IPR001610 PAC motif APY29_RS09305 97ed1d1eda52d7f3ebaf1ba8f7722ced 540 SUPERFAMILY SSF55874 220 394 4.45E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS09305 97ed1d1eda52d7f3ebaf1ba8f7722ced 540 SUPERFAMILY SSF55785 35 145 1.2E-27 T 28-03-2018 IPR000014 PAS domain APY29_RS09305 97ed1d1eda52d7f3ebaf1ba8f7722ced 540 SUPERFAMILY SSF47384 151 227 3.14E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS09355 17b148687528b44ac2c286f4d9b29957 302 Gene3D G3DSA:3.20.20.70 2 301 6.7E-76 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS09355 17b148687528b44ac2c286f4d9b29957 302 SUPERFAMILY SSF51569 6 293 1.99E-83 T 28-03-2018 APY29_RS09355 17b148687528b44ac2c286f4d9b29957 302 Pfam PF00701 Dihydrodipicolinate synthetase family 8 292 3.5E-58 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 APY29_RS09355 17b148687528b44ac2c286f4d9b29957 302 PIRSF PIRSF001365 3 301 6.0E-75 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 APY29_RS09355 17b148687528b44ac2c286f4d9b29957 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 3.2E-12 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 APY29_RS09355 17b148687528b44ac2c286f4d9b29957 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 3.2E-12 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 APY29_RS09355 17b148687528b44ac2c286f4d9b29957 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 3.2E-12 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 APY29_RS09355 17b148687528b44ac2c286f4d9b29957 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 3.2E-12 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 APY29_RS09355 17b148687528b44ac2c286f4d9b29957 302 SMART SM01130 6 295 1.2E-92 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 APY29_RS21235 1204f7857606261256bf71eabf3b8552 634 SMART SM01228 552 623 9.1E-43 T 28-03-2018 APY29_RS21235 1204f7857606261256bf71eabf3b8552 634 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 630 41.779 T 28-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 APY29_RS21235 1204f7857606261256bf71eabf3b8552 634 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 279 293 - T 28-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 APY29_RS21235 1204f7857606261256bf71eabf3b8552 634 Pfam PF01134 Glucose inhibited division protein A 9 404 1.5E-162 T 28-03-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 APY29_RS21235 1204f7857606261256bf71eabf3b8552 634 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 627 1.2E-267 T 28-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 APY29_RS21235 1204f7857606261256bf71eabf3b8552 634 Pfam PF13932 GidA associated domain 409 622 5.2E-72 T 28-03-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 APY29_RS21235 1204f7857606261256bf71eabf3b8552 634 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 374 397 - T 28-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 APY29_RS21235 1204f7857606261256bf71eabf3b8552 634 Gene3D G3DSA:3.50.50.60 6 271 2.1E-68 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS21235 1204f7857606261256bf71eabf3b8552 634 SUPERFAMILY SSF51905 8 69 8.23E-46 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS21235 1204f7857606261256bf71eabf3b8552 634 SUPERFAMILY SSF51905 100 267 8.23E-46 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS06060 6f1ecba204c59693cf2c8ded218f1be9 102 SUPERFAMILY SSF82771 6 77 3.14E-12 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily APY29_RS06060 6f1ecba204c59693cf2c8ded218f1be9 102 Gene3D G3DSA:3.40.1440.10 2 84 6.1E-6 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily APY29_RS06060 6f1ecba204c59693cf2c8ded218f1be9 102 Pfam PF01541 GIY-YIG catalytic domain 7 76 9.1E-12 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily APY29_RS00315 0b3c05e0af402c57fff535f56d5b9750 359 Gene3D G3DSA:3.40.50.2000 172 334 7.6E-32 T 28-03-2018 APY29_RS00315 0b3c05e0af402c57fff535f56d5b9750 359 Pfam PF13439 Glycosyltransferase Family 4 17 163 1.3E-12 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 APY29_RS00315 0b3c05e0af402c57fff535f56d5b9750 359 SUPERFAMILY SSF53756 1 350 6.8E-60 T 28-03-2018 APY29_RS00315 0b3c05e0af402c57fff535f56d5b9750 359 Pfam PF13692 Glycosyl transferases group 1 182 316 5.3E-24 T 28-03-2018 APY29_RS00315 0b3c05e0af402c57fff535f56d5b9750 359 Gene3D G3DSA:3.40.50.2000 4 171 7.4E-7 T 28-03-2018 APY29_RS19495 27fb1b5c409c30b81fe62a2cc499577f 515 SUPERFAMILY SSF160246 28 89 8.37E-12 T 28-03-2018 APY29_RS19495 27fb1b5c409c30b81fe62a2cc499577f 515 SMART SM00382 263 405 4.6E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS19495 27fb1b5c409c30b81fe62a2cc499577f 515 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 330 344 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APY29_RS19495 27fb1b5c409c30b81fe62a2cc499577f 515 SUPERFAMILY SSF52540 113 504 1.39E-97 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS19495 27fb1b5c409c30b81fe62a2cc499577f 515 Gene3D G3DSA:3.40.50.300 236 513 3.6E-61 T 28-03-2018 APY29_RS19495 27fb1b5c409c30b81fe62a2cc499577f 515 Gene3D G3DSA:3.30.450.90 111 235 3.4E-42 T 28-03-2018 APY29_RS19495 27fb1b5c409c30b81fe62a2cc499577f 515 Pfam PF00437 Type II/IV secretion system protein 139 402 1.7E-83 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APY29_RS19495 27fb1b5c409c30b81fe62a2cc499577f 515 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 27 504 1.5E-191 T 28-03-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 APY29_RS17800 9efc97d304843689344c311d52e0ea1e 317 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 34 306 5.1E-87 T 28-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 APY29_RS17800 9efc97d304843689344c311d52e0ea1e 317 Gene3D G3DSA:1.10.3720.10 35 309 2.1E-39 T 28-03-2018 APY29_RS17800 9efc97d304843689344c311d52e0ea1e 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 304 3.4E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS17800 9efc97d304843689344c311d52e0ea1e 317 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 35 308 1.1E-119 T 28-03-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 APY29_RS17800 9efc97d304843689344c311d52e0ea1e 317 SUPERFAMILY SSF161098 33 300 2.43E-52 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS15790 7c8c8ae947989143a1cf89e2955fdbf5 258 Pfam PF02592 Putative vitamin uptake transporter 62 234 1.2E-41 T 28-03-2018 IPR003744 Queuosine precursor transporter APY29_RS15790 7c8c8ae947989143a1cf89e2955fdbf5 258 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 58 236 6.9E-34 T 28-03-2018 IPR003744 Queuosine precursor transporter APY29_RS20860 3528e9cef79be29b4e9eb73965385d50 196 SUPERFAMILY SSF52833 54 189 2.3E-18 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS20860 3528e9cef79be29b4e9eb73965385d50 196 Pfam PF13899 Thioredoxin-like 75 159 1.1E-11 T 28-03-2018 APY29_RS20860 3528e9cef79be29b4e9eb73965385d50 196 Gene3D G3DSA:3.40.30.10 76 194 1.1E-11 T 28-03-2018 APY29_RS21680 fc5819afd7ef04d236c612b3d0282eaf 423 Pfam PF07687 Peptidase dimerisation domain 226 320 5.8E-5 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain APY29_RS21680 fc5819afd7ef04d236c612b3d0282eaf 423 SUPERFAMILY SSF55031 223 335 7.92E-26 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain APY29_RS21680 fc5819afd7ef04d236c612b3d0282eaf 423 SUPERFAMILY SSF53187 345 417 2.8E-78 T 28-03-2018 APY29_RS21680 fc5819afd7ef04d236c612b3d0282eaf 423 SUPERFAMILY SSF53187 25 232 2.8E-78 T 28-03-2018 APY29_RS21680 fc5819afd7ef04d236c612b3d0282eaf 423 Gene3D G3DSA:3.40.630.10 33 253 3.2E-33 T 28-03-2018 APY29_RS21680 fc5819afd7ef04d236c612b3d0282eaf 423 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 33 404 3.0E-113 T 28-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 APY29_RS21680 fc5819afd7ef04d236c612b3d0282eaf 423 PIRSF PIRSF001235 19 419 5.0E-129 T 28-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 APY29_RS21680 fc5819afd7ef04d236c612b3d0282eaf 423 Gene3D G3DSA:3.40.630.10 254 420 2.5E-22 T 28-03-2018 APY29_RS21680 fc5819afd7ef04d236c612b3d0282eaf 423 Pfam PF01546 Peptidase family M20/M25/M40 86 415 1.4E-29 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APY29_RS07130 1347041c1a993455ee18ae6700212d44 505 Pfam PF04820 Tryptophan halogenase 8 457 2.6E-191 T 28-03-2018 IPR006905 Flavin-dependent halogenase APY29_RS07130 1347041c1a993455ee18ae6700212d44 505 PIRSF PIRSF011396 1 494 9.4E-183 T 28-03-2018 IPR033856 Flavin-dependent tryptophan halogenase APY29_RS07130 1347041c1a993455ee18ae6700212d44 505 SUPERFAMILY SSF51905 317 405 2.59E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS07130 1347041c1a993455ee18ae6700212d44 505 SUPERFAMILY SSF51905 134 232 2.59E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS07130 1347041c1a993455ee18ae6700212d44 505 SUPERFAMILY SSF51905 7 90 2.59E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS07130 1347041c1a993455ee18ae6700212d44 505 Gene3D G3DSA:3.50.50.60 1 357 2.6E-32 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 SUPERFAMILY SSF47384 284 361 1.02E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 SUPERFAMILY SSF55874 353 525 9.43E-48 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 Gene3D G3DSA:1.10.287.130 294 359 1.1E-15 T 28-03-2018 APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 520 3.0E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 461 3.0E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 500 3.0E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 475 3.0E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 410 521 4.5E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 SMART SM00086 229 271 1.3E-5 T 28-03-2018 IPR001610 PAC motif APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 SUPERFAMILY SSF52172 550 675 2.42E-32 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 Gene3D G3DSA:3.30.450.20 139 293 1.0E-39 T 28-03-2018 APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 SMART SM00448 552 670 7.4E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 Pfam PF13426 PAS domain 59 144 0.012 T 28-03-2018 IPR000014 PAS domain APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 Gene3D G3DSA:3.30.565.10 368 531 3.5E-46 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 SMART SM00387 410 523 4.8E-42 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 Gene3D G3DSA:3.40.50.2300 543 678 1.7E-32 T 28-03-2018 APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 SMART SM00091 30 102 42.0 T 28-03-2018 IPR000014 PAS domain APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 SMART SM00091 157 223 6.0E-9 T 28-03-2018 IPR000014 PAS domain APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 SUPERFAMILY SSF55785 142 269 3.32E-28 T 28-03-2018 IPR000014 PAS domain APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 SMART SM00388 298 364 7.8E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 30 152 1.5E-6 T 28-03-2018 IPR000014 PAS domain APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 276 2.1E-16 T 28-03-2018 IPR000014 PAS domain APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 Pfam PF08448 PAS fold 164 273 5.1E-14 T 28-03-2018 IPR013656 PAS fold-4 APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 Pfam PF00512 His Kinase A (phospho-acceptor) domain 299 361 1.6E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 SUPERFAMILY SSF55785 57 153 7.15E-11 T 28-03-2018 IPR000014 PAS domain APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 Pfam PF00072 Response regulator receiver domain 555 671 6.7E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS03690 30600f2ec38b03a31df11d2576f13dd7 678 Gene3D G3DSA:3.30.450.20 29 138 4.0E-15 T 28-03-2018 APY29_RS20815 3838ba30882a5838df7316a72e3b998b 94 PIRSF PIRSF028784 4 94 1.6E-26 T 28-03-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 APY29_RS20815 3838ba30882a5838df7316a72e3b998b 94 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 36 87 3.7E-19 T 28-03-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 APY29_RS18355 791b32d6e9fc9c4b7df48a07c639e839 261 PIRSF PIRSF029730 5 260 8.5E-104 T 28-03-2018 IPR011227 Uncharacterised conserved protein UCP029730 APY29_RS18355 791b32d6e9fc9c4b7df48a07c639e839 261 SUPERFAMILY SSF53187 10 258 1.73E-79 T 28-03-2018 APY29_RS18355 791b32d6e9fc9c4b7df48a07c639e839 261 Gene3D G3DSA:3.40.630.40 17 260 7.9E-70 T 28-03-2018 APY29_RS18355 791b32d6e9fc9c4b7df48a07c639e839 261 Pfam PF05013 N-formylglutamate amidohydrolase 27 234 1.8E-47 T 28-03-2018 IPR007709 N-formylglutamate amidohydrolase APY29_RS14930 aa33b7bf1be9b79c950e37368b8ae651 889 Gene3D G3DSA:3.30.70.270 712 889 1.8E-52 T 28-03-2018 APY29_RS14930 aa33b7bf1be9b79c950e37368b8ae651 889 Pfam PF07494 Two component regulator propeller 162 181 0.011 T 28-03-2018 IPR011110 Two component regulator propeller APY29_RS14930 aa33b7bf1be9b79c950e37368b8ae651 889 Pfam PF07494 Two component regulator propeller 241 263 0.0048 T 28-03-2018 IPR011110 Two component regulator propeller APY29_RS14930 aa33b7bf1be9b79c950e37368b8ae651 889 Pfam PF07495 Y_Y_Y domain 585 646 3.6E-14 T 28-03-2018 IPR011123 Two component regulator three Y APY29_RS14930 aa33b7bf1be9b79c950e37368b8ae651 889 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 726 887 3.7E-44 T 28-03-2018 IPR000160 GGDEF domain APY29_RS14930 aa33b7bf1be9b79c950e37368b8ae651 889 SUPERFAMILY SSF63829 116 393 1.0E-14 T 28-03-2018 APY29_RS14930 aa33b7bf1be9b79c950e37368b8ae651 889 SMART SM00267 718 889 1.6E-55 T 28-03-2018 IPR000160 GGDEF domain APY29_RS14930 aa33b7bf1be9b79c950e37368b8ae651 889 Pfam PF00990 Diguanylate cyclase, GGDEF domain 729 885 1.4E-44 T 28-03-2018 IPR000160 GGDEF domain APY29_RS14930 aa33b7bf1be9b79c950e37368b8ae651 889 Gene3D G3DSA:2.130.10.10 289 437 1.4E-12 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS14930 aa33b7bf1be9b79c950e37368b8ae651 889 Gene3D G3DSA:2.130.10.10 28 193 2.2E-13 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS14930 aa33b7bf1be9b79c950e37368b8ae651 889 Gene3D G3DSA:2.130.10.10 440 563 0.0018 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS14930 aa33b7bf1be9b79c950e37368b8ae651 889 Gene3D G3DSA:2.130.10.10 194 288 1.4E-10 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS14930 aa33b7bf1be9b79c950e37368b8ae651 889 SUPERFAMILY SSF63829 2 179 3.92E-10 T 28-03-2018 APY29_RS14930 aa33b7bf1be9b79c950e37368b8ae651 889 SUPERFAMILY SSF55073 734 888 4.16E-45 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS23675 b74adf11b4e2b9824205e4f69f7ced55 89 Gene3D G3DSA:1.10.1220.10 1 35 2.4E-5 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APY29_RS08685 12021b2704a02323966cc43a28742391 295 SUPERFAMILY SSF52096 28 288 9.02E-86 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS08685 12021b2704a02323966cc43a28742391 295 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 285 37.946 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 APY29_RS08685 12021b2704a02323966cc43a28742391 295 Gene3D G3DSA:3.90.226.10 15 291 6.2E-68 T 28-03-2018 APY29_RS08685 12021b2704a02323966cc43a28742391 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 255 264 4.9E-42 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 APY29_RS08685 12021b2704a02323966cc43a28742391 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 204 221 4.9E-42 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 APY29_RS08685 12021b2704a02323966cc43a28742391 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 133 147 4.9E-42 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 APY29_RS08685 12021b2704a02323966cc43a28742391 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 233 244 4.9E-42 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 APY29_RS08685 12021b2704a02323966cc43a28742391 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 167 185 4.9E-42 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 APY29_RS08685 12021b2704a02323966cc43a28742391 295 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 287 9.2E-127 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 APY29_RS08685 12021b2704a02323966cc43a28742391 295 Pfam PF01039 Carboxyl transferase domain 110 243 5.2E-17 T 28-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 APY29_RS05915 19564989de2309339149f3e9fe8d408b 137 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 4.5E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS05915 19564989de2309339149f3e9fe8d408b 137 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 2.3E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS05915 19564989de2309339149f3e9fe8d408b 137 Gene3D G3DSA:3.30.700.10 7 136 4.1E-22 T 28-03-2018 APY29_RS05915 19564989de2309339149f3e9fe8d408b 137 SUPERFAMILY SSF54523 7 136 1.73E-20 T 28-03-2018 APY29_RS05915 19564989de2309339149f3e9fe8d408b 137 Pfam PF00114 Pilin (bacterial filament) 36 136 8.8E-11 T 28-03-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 APY29_RS21205 0e01d673f75510718432d7ecca4ab31d 294 Gene3D G3DSA:3.40.50.150 6 272 1.0E-40 T 28-03-2018 APY29_RS21205 0e01d673f75510718432d7ecca4ab31d 294 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 13 264 1.1E-72 T 28-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 APY29_RS21205 0e01d673f75510718432d7ecca4ab31d 294 Pfam PF08241 Methyltransferase domain 51 147 2.7E-20 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APY29_RS21205 0e01d673f75510718432d7ecca4ab31d 294 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 5 265 30.282 T 28-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 APY29_RS21205 0e01d673f75510718432d7ecca4ab31d 294 SUPERFAMILY SSF53335 10 216 7.06E-38 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS08800 1cada37080e213973066872bac3ee2e3 500 Pfam PF00361 Proton-conducting membrane transporter 128 428 8.5E-78 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08800 1cada37080e213973066872bac3ee2e3 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 233 257 5.9E-40 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08800 1cada37080e213973066872bac3ee2e3 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 134 153 5.9E-40 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08800 1cada37080e213973066872bac3ee2e3 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 385 411 5.9E-40 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08800 1cada37080e213973066872bac3ee2e3 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 164 188 5.9E-40 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08800 1cada37080e213973066872bac3ee2e3 500 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 494 1.1E-195 T 28-03-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS01715 7e51f71fb8ae45c64a7215976e4ef276 109 Gene3D G3DSA:3.40.50.2300 1 39 2.8E-7 T 28-03-2018 APY29_RS01715 7e51f71fb8ae45c64a7215976e4ef276 109 PIRSF PIRSF029416 1 106 2.3E-47 T 28-03-2018 IPR016919 Uncharacterised conserved protein UCP029416, tyrosine-protein phosphatase, Mlr4629 APY29_RS01715 7e51f71fb8ae45c64a7215976e4ef276 109 Gene3D G3DSA:3.40.50.2300 40 98 0.11 T 28-03-2018 APY29_RS01715 7e51f71fb8ae45c64a7215976e4ef276 109 SUPERFAMILY SSF52788 1 104 2.88E-15 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily APY29_RS20635 d2b51ed594af29e388152c92ed8ae9b2 756 SMART SM00387 209 325 5.6E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS20635 d2b51ed594af29e388152c92ed8ae9b2 756 SMART SM00448 484 600 5.8E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS20635 d2b51ed594af29e388152c92ed8ae9b2 756 Pfam PF00072 Response regulator receiver domain 486 598 9.3E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS20635 d2b51ed594af29e388152c92ed8ae9b2 756 SUPERFAMILY SSF47226 634 740 2.75E-23 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS20635 d2b51ed594af29e388152c92ed8ae9b2 756 Gene3D G3DSA:3.30.565.10 166 329 6.3E-53 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS20635 d2b51ed594af29e388152c92ed8ae9b2 756 SUPERFAMILY SSF55874 151 323 6.02E-50 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS20635 d2b51ed594af29e388152c92ed8ae9b2 756 SMART SM00388 97 162 1.2E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS20635 d2b51ed594af29e388152c92ed8ae9b2 756 Pfam PF00512 His Kinase A (phospho-acceptor) domain 97 161 8.7E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS20635 d2b51ed594af29e388152c92ed8ae9b2 756 Gene3D G3DSA:1.10.287.130 87 158 1.0E-17 T 28-03-2018 APY29_RS20635 d2b51ed594af29e388152c92ed8ae9b2 756 SUPERFAMILY SSF52172 483 606 2.85E-39 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS20635 d2b51ed594af29e388152c92ed8ae9b2 756 Gene3D G3DSA:1.20.120.160 631 748 2.9E-16 T 28-03-2018 APY29_RS20635 d2b51ed594af29e388152c92ed8ae9b2 756 Gene3D G3DSA:3.40.50.2300 479 630 1.0E-43 T 28-03-2018 APY29_RS20635 d2b51ed594af29e388152c92ed8ae9b2 756 SUPERFAMILY SSF47384 80 163 1.88E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS20635 d2b51ed594af29e388152c92ed8ae9b2 756 PRINTS PR00344 Bacterial sensor protein C-terminal signature 250 264 8.1E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS20635 d2b51ed594af29e388152c92ed8ae9b2 756 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 278 8.1E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS20635 d2b51ed594af29e388152c92ed8ae9b2 756 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 322 8.1E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS20635 d2b51ed594af29e388152c92ed8ae9b2 756 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 303 8.1E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS20635 d2b51ed594af29e388152c92ed8ae9b2 756 Pfam PF01627 Hpt domain 657 727 3.7E-11 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS20635 d2b51ed594af29e388152c92ed8ae9b2 756 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 209 323 5.1E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS20635 d2b51ed594af29e388152c92ed8ae9b2 756 Gene3D G3DSA:3.40.50.2300 330 426 3.7E-4 T 28-03-2018 APY29_RS14765 91ec192830c65c490fe078d6f4fc9c1f 455 Gene3D G3DSA:3.50.50.60 10 364 2.9E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS14765 91ec192830c65c490fe078d6f4fc9c1f 455 Hamap MF_01971 Kynurenine 3-monooxygenase [kmo]. 6 445 27.46 T 28-03-2018 IPR027545 Kynurenine 3-monooxygenase GO:0004502|GO:0006569|GO:0019805 KEGG: 00380+1.14.13.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7765|Reactome: R-HSA-71240 APY29_RS14765 91ec192830c65c490fe078d6f4fc9c1f 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 312 328 1.0E-17 T 28-03-2018 APY29_RS14765 91ec192830c65c490fe078d6f4fc9c1f 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 1.0E-17 T 28-03-2018 APY29_RS14765 91ec192830c65c490fe078d6f4fc9c1f 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 312 1.0E-17 T 28-03-2018 APY29_RS14765 91ec192830c65c490fe078d6f4fc9c1f 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 1.0E-17 T 28-03-2018 APY29_RS14765 91ec192830c65c490fe078d6f4fc9c1f 455 SUPERFAMILY SSF51905 283 388 3.11E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS14765 91ec192830c65c490fe078d6f4fc9c1f 455 SUPERFAMILY SSF51905 12 179 3.11E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS14765 91ec192830c65c490fe078d6f4fc9c1f 455 Pfam PF01494 FAD binding domain 11 334 7.1E-24 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 APY29_RS19570 0830ec9dd23fc67f6865bad7c29eef4e 120 SMART SM00749 53 116 9.1E-9 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria APY29_RS19570 0830ec9dd23fc67f6865bad7c29eef4e 120 Pfam PF04972 BON domain 48 115 2.2E-18 T 28-03-2018 IPR007055 BON domain APY29_RS17960 6bcf3ef6a87b5254c2b713bc8698049b 147 Gene3D G3DSA:3.100.10.10 42 147 1.1E-20 T 28-03-2018 APY29_RS17960 6bcf3ef6a87b5254c2b713bc8698049b 147 SUPERFAMILY SSF52080 6 146 2.88E-38 T 28-03-2018 IPR021131 Ribosomal protein L18e/L15P APY29_RS17960 6bcf3ef6a87b5254c2b713bc8698049b 147 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 4 146 7.0E-44 T 28-03-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS17960 6bcf3ef6a87b5254c2b713bc8698049b 147 ProSitePatterns PS00475 Ribosomal protein L15 signature. 112 142 - T 28-03-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS17960 6bcf3ef6a87b5254c2b713bc8698049b 147 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 5 147 17.174 T 28-03-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 APY29_RS17960 6bcf3ef6a87b5254c2b713bc8698049b 147 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 30 146 5.0E-26 T 28-03-2018 IPR021131 Ribosomal protein L18e/L15P APY29_RS12880 4ae2cef8d9c06b7fd50a136ea1bed538 175 Pfam PF03748 Flagellar basal body-associated protein FliL 73 175 1.9E-23 T 28-03-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 APY29_RS23225 bd244d63b6337ffe6dbe119fbe28fb49 335 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 335 8.1E-163 T 28-03-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 APY29_RS23225 bd244d63b6337ffe6dbe119fbe28fb49 335 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 148 169 - T 28-03-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 APY29_RS23225 bd244d63b6337ffe6dbe119fbe28fb49 335 SUPERFAMILY SSF50129 1 143 2.59E-33 T 28-03-2018 IPR011032 GroES-like APY29_RS23225 bd244d63b6337ffe6dbe119fbe28fb49 335 SUPERFAMILY SSF51735 116 286 8.22E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS23225 bd244d63b6337ffe6dbe119fbe28fb49 335 Gene3D G3DSA:3.40.50.720 142 298 6.1E-21 T 28-03-2018 APY29_RS23225 bd244d63b6337ffe6dbe119fbe28fb49 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 89 7.9E-6 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APY29_RS23225 bd244d63b6337ffe6dbe119fbe28fb49 335 Gene3D G3DSA:3.90.180.10 1 141 2.5E-35 T 28-03-2018 APY29_RS23225 bd244d63b6337ffe6dbe119fbe28fb49 335 SMART SM00829 10 332 3.3E-10 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APY29_RS23225 bd244d63b6337ffe6dbe119fbe28fb49 335 Pfam PF13602 Zinc-binding dehydrogenase 192 332 4.6E-24 T 28-03-2018 APY29_RS13475 03b4e31160d0a3e788ba9867768546b7 258 Pfam PF00977 Histidine biosynthesis protein 5 238 2.0E-71 T 28-03-2018 IPR006062 Histidine biosynthesis GO:0000105 APY29_RS13475 03b4e31160d0a3e788ba9867768546b7 258 Gene3D G3DSA:3.20.20.70 4 251 2.9E-58 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS13475 03b4e31160d0a3e788ba9867768546b7 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 255 43.593 T 28-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 APY29_RS13475 03b4e31160d0a3e788ba9867768546b7 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 255 3.1E-100 T 28-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 APY29_RS13475 03b4e31160d0a3e788ba9867768546b7 258 SUPERFAMILY SSF51366 1 255 1.57E-70 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APY29_RS01520 8574effaec5816ce763a0e04ea244b7a 191 PIRSF PIRSF029287 143 188 0.0041 T 28-03-2018 IPR017748 Type VI secretion system-associated, BMAA0400 APY29_RS01520 8574effaec5816ce763a0e04ea244b7a 191 PIRSF PIRSF029287 3 150 1.7E-62 T 28-03-2018 IPR017748 Type VI secretion system-associated, BMAA0400 APY29_RS01520 8574effaec5816ce763a0e04ea244b7a 191 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 10 138 1.7E-37 T 28-03-2018 IPR017748 Type VI secretion system-associated, BMAA0400 APY29_RS01520 8574effaec5816ce763a0e04ea244b7a 191 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 10 138 1.3E-31 T 28-03-2018 IPR017748 Type VI secretion system-associated, BMAA0400 APY29_RS01520 8574effaec5816ce763a0e04ea244b7a 191 Gene3D G3DSA:3.40.1730.10 7 184 7.7E-38 T 28-03-2018 APY29_RS02005 e08020e612c0559343865531b94de7cc 283 Gene3D G3DSA:3.40.50.10860 2 110 5.8E-39 T 28-03-2018 APY29_RS02005 e08020e612c0559343865531b94de7cc 283 Gene3D G3DSA:3.40.50.720 111 279 1.4E-35 T 28-03-2018 APY29_RS02005 e08020e612c0559343865531b94de7cc 283 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 8 90 8.7E-25 T 28-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 APY29_RS02005 e08020e612c0559343865531b94de7cc 283 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 3 274 32.58 T 28-03-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 APY29_RS02005 e08020e612c0559343865531b94de7cc 283 SUPERFAMILY SSF51735 103 273 6.06E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS02005 e08020e612c0559343865531b94de7cc 283 SUPERFAMILY SSF53223 4 102 1.15E-31 T 28-03-2018 APY29_RS02005 e08020e612c0559343865531b94de7cc 283 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 6 273 9.7E-71 T 28-03-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 APY29_RS02005 e08020e612c0559343865531b94de7cc 283 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 113 194 3.5E-12 T 28-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase APY29_RS19275 8a569e9c727043dc307fd300b8ea02a5 263 Pfam PF02567 Phenazine biosynthesis-like protein 8 259 1.9E-48 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 APY29_RS19275 8a569e9c727043dc307fd300b8ea02a5 263 Gene3D G3DSA:3.10.310.10 127 251 9.6E-31 T 28-03-2018 APY29_RS19275 8a569e9c727043dc307fd300b8ea02a5 263 SUPERFAMILY SSF54506 1 262 3.14E-73 T 28-03-2018 APY29_RS19275 8a569e9c727043dc307fd300b8ea02a5 263 PIRSF PIRSF016184 1 263 4.7E-48 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 APY29_RS19275 8a569e9c727043dc307fd300b8ea02a5 263 Gene3D G3DSA:3.10.310.10 1 126 1.0E-27 T 28-03-2018 APY29_RS19275 8a569e9c727043dc307fd300b8ea02a5 263 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 239 7.5E-28 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 APY29_RS10910 faa21d6c4a9d5e6a728190d33dd7b915 273 Pfam PF03618 Kinase/pyrophosphorylase 7 263 4.6E-71 T 28-03-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 APY29_RS10910 faa21d6c4a9d5e6a728190d33dd7b915 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 4 272 70.938 T 28-03-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein APY29_RS18780 738f2399d45b21358b7e6c40432b467e 348 Pfam PF13379 NMT1-like family 37 281 1.8E-20 T 28-03-2018 APY29_RS18780 738f2399d45b21358b7e6c40432b467e 348 Gene3D G3DSA:3.40.190.10 36 150 2.0E-11 T 28-03-2018 APY29_RS18780 738f2399d45b21358b7e6c40432b467e 348 Gene3D G3DSA:3.40.190.10 163 338 2.3E-21 T 28-03-2018 APY29_RS18780 738f2399d45b21358b7e6c40432b467e 348 SUPERFAMILY SSF53850 49 284 1.29E-27 T 28-03-2018 APY29_RS02945 ca3bb19d8b6e9148e02092f6ac35add3 241 SMART SM00987 56 216 1.1E-41 T 28-03-2018 APY29_RS02945 ca3bb19d8b6e9148e02092f6ac35add3 241 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 11 227 39.781 T 28-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 APY29_RS02945 ca3bb19d8b6e9148e02092f6ac35add3 241 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 64 73 - T 28-03-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 APY29_RS02945 ca3bb19d8b6e9148e02092f6ac35add3 241 Gene3D G3DSA:3.40.470.10 2 229 6.3E-99 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 APY29_RS02945 ca3bb19d8b6e9148e02092f6ac35add3 241 Pfam PF03167 Uracil DNA glycosylase superfamily 60 213 3.7E-24 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 APY29_RS02945 ca3bb19d8b6e9148e02092f6ac35add3 241 SMART SM00986 56 216 1.1E-41 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 APY29_RS02945 ca3bb19d8b6e9148e02092f6ac35add3 241 SUPERFAMILY SSF52141 9 228 2.4E-90 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 APY29_RS02945 ca3bb19d8b6e9148e02092f6ac35add3 241 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 12 219 1.5E-78 T 28-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 APY29_RS14645 7fea0fe3798ee93d5c7a5a59cde2b281 112 SUPERFAMILY SSF89360 1 96 3.92E-27 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 APY29_RS14645 7fea0fe3798ee93d5c7a5a59cde2b281 112 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 106 6.2E-32 T 28-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 APY29_RS14645 7fea0fe3798ee93d5c7a5a59cde2b281 112 Gene3D G3DSA:2.60.300.12 2 110 2.7E-32 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 APY29_RS14645 7fea0fe3798ee93d5c7a5a59cde2b281 112 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 5.6E-17 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 APY29_RS14645 7fea0fe3798ee93d5c7a5a59cde2b281 112 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 28-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 APY29_RS10680 b78960ed9a20d023ab9fc223809d1fec 400 SUPERFAMILY SSF56349 98 384 1.45E-61 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APY29_RS10680 b78960ed9a20d023ab9fc223809d1fec 400 Gene3D G3DSA:1.10.443.10 206 383 1.9E-26 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS10680 b78960ed9a20d023ab9fc223809d1fec 400 Gene3D G3DSA:1.10.150.130 93 205 7.5E-19 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal APY29_RS10680 b78960ed9a20d023ab9fc223809d1fec 400 Pfam PF00589 Phage integrase family 203 373 8.1E-22 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS10680 b78960ed9a20d023ab9fc223809d1fec 400 Pfam PF13356 Arm DNA-binding domain 2 88 2.6E-17 T 28-03-2018 IPR025166 Integrase, DNA-binding domain APY29_RS06320 52085088fed4e845cb221e10fca23c8b 242 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 6 235 2.1E-86 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS06320 52085088fed4e845cb221e10fca23c8b 242 SUPERFAMILY SSF75625 7 236 5.76E-85 T 28-03-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS06320 52085088fed4e845cb221e10fca23c8b 242 Gene3D G3DSA:3.30.70.980 80 175 8.0E-31 T 28-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS06320 52085088fed4e845cb221e10fca23c8b 242 Gene3D G3DSA:3.30.70.980 176 236 3.6E-9 T 28-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS06320 52085088fed4e845cb221e10fca23c8b 242 Gene3D G3DSA:1.10.10.200 20 73 2.3E-22 T 28-03-2018 IPR017856 Integrase, N-terminal zinc-binding domain-like APY29_RS06320 52085088fed4e845cb221e10fca23c8b 242 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 2 237 33.158 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS06320 52085088fed4e845cb221e10fca23c8b 242 Pfam PF01709 Transcriptional regulator 7 235 1.9E-87 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS14915 96d02a7ece6c09e837a8694e7473abad 236 PIRSF PIRSF003107 6 223 3.6E-58 T 28-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 APY29_RS14915 96d02a7ece6c09e837a8694e7473abad 236 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 11 219 6.6E-60 T 28-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 APY29_RS14915 96d02a7ece6c09e837a8694e7473abad 236 Pfam PF01895 PhoU domain 127 210 3.2E-17 T 28-03-2018 IPR026022 PhoU domain APY29_RS14915 96d02a7ece6c09e837a8694e7473abad 236 Pfam PF01895 PhoU domain 24 110 5.6E-19 T 28-03-2018 IPR026022 PhoU domain APY29_RS14915 96d02a7ece6c09e837a8694e7473abad 236 SUPERFAMILY SSF109755 11 227 1.02E-64 T 28-03-2018 APY29_RS14915 96d02a7ece6c09e837a8694e7473abad 236 Gene3D G3DSA:1.20.58.220 120 233 5.1E-26 T 28-03-2018 APY29_RS14915 96d02a7ece6c09e837a8694e7473abad 236 Gene3D G3DSA:1.20.58.220 5 119 1.1E-24 T 28-03-2018 APY29_RS04260 a5854d4d1ffe0930a372d2d1d0295dd0 467 Pfam PF01050 Mannose-6-phosphate isomerase 312 462 1.9E-74 T 28-03-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 APY29_RS04260 a5854d4d1ffe0930a372d2d1d0295dd0 467 Gene3D G3DSA:3.90.550.10 4 334 2.3E-96 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS04260 a5854d4d1ffe0930a372d2d1d0295dd0 467 Pfam PF00483 Nucleotidyl transferase 6 285 5.3E-78 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 APY29_RS04260 a5854d4d1ffe0930a372d2d1d0295dd0 467 SUPERFAMILY SSF51182 183 467 8.9E-90 T 28-03-2018 IPR011051 RmlC-like cupin domain APY29_RS04260 a5854d4d1ffe0930a372d2d1d0295dd0 467 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 5 466 1.1E-228 T 28-03-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 APY29_RS04260 a5854d4d1ffe0930a372d2d1d0295dd0 467 Gene3D G3DSA:2.60.120.10 335 445 1.2E-28 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS04260 a5854d4d1ffe0930a372d2d1d0295dd0 467 SUPERFAMILY SSF53448 5 279 5.16E-73 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS10515 612da198391b604be5991073b482be13 550 Gene3D G3DSA:3.30.70.1560 172 246 7.2E-18 T 28-03-2018 APY29_RS10515 612da198391b604be5991073b482be13 550 Gene3D G3DSA:3.10.290.10 24 82 7.7E-13 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS10515 612da198391b604be5991073b482be13 550 Pfam PF01479 S4 domain 28 73 2.7E-9 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS10515 612da198391b604be5991073b482be13 550 Gene3D G3DSA:3.30.70.580 83 171 7.1E-15 T 28-03-2018 APY29_RS10515 612da198391b604be5991073b482be13 550 Pfam PF00849 RNA pseudouridylate synthase 91 226 9.1E-16 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS10515 612da198391b604be5991073b482be13 550 SUPERFAMILY SSF55120 87 259 6.72E-36 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS10515 612da198391b604be5991073b482be13 550 SUPERFAMILY SSF55174 26 114 2.94E-16 T 28-03-2018 APY29_RS10515 612da198391b604be5991073b482be13 550 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 129 143 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APY29_RS10515 612da198391b604be5991073b482be13 550 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 95 255 7.1E-49 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APY29_RS10515 612da198391b604be5991073b482be13 550 SMART SM00363 28 86 8.9E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS11335 100fabb220e9163db5c113ac61a38a75 161 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 70 161 1.6E-34 T 28-03-2018 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal APY29_RS11335 100fabb220e9163db5c113ac61a38a75 161 SUPERFAMILY SSF46785 66 161 5.71E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS11335 100fabb220e9163db5c113ac61a38a75 161 Gene3D G3DSA:2.40.10.200 88 161 1.6E-25 T 28-03-2018 APY29_RS21500 f3cd0e716d7b41b1abf67b18f52d38c9 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 4.3E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS21500 f3cd0e716d7b41b1abf67b18f52d38c9 304 Gene3D G3DSA:1.10.10.10 2 84 2.1E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS21500 f3cd0e716d7b41b1abf67b18f52d38c9 304 Gene3D G3DSA:3.40.190.10 89 176 4.7E-14 T 28-03-2018 APY29_RS21500 f3cd0e716d7b41b1abf67b18f52d38c9 304 Gene3D G3DSA:3.40.190.10 177 268 1.5E-15 T 28-03-2018 APY29_RS21500 f3cd0e716d7b41b1abf67b18f52d38c9 304 SUPERFAMILY SSF53850 88 296 1.07E-36 T 28-03-2018 APY29_RS21500 f3cd0e716d7b41b1abf67b18f52d38c9 304 Pfam PF03466 LysR substrate binding domain 88 292 4.6E-34 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS21500 f3cd0e716d7b41b1abf67b18f52d38c9 304 SUPERFAMILY SSF46785 6 111 7.71E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS21500 f3cd0e716d7b41b1abf67b18f52d38c9 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS21500 f3cd0e716d7b41b1abf67b18f52d38c9 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS21500 f3cd0e716d7b41b1abf67b18f52d38c9 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS22655 6def5370844bffb1e52157e0fb712b39 248 Pfam PF00440 Bacterial regulatory proteins, tetR family 37 83 1.6E-12 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS22655 6def5370844bffb1e52157e0fb712b39 248 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 58 81 7.2E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS22655 6def5370844bffb1e52157e0fb712b39 248 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 50 7.2E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS22655 6def5370844bffb1e52157e0fb712b39 248 ProSitePatterns PS01081 TetR-type HTH domain signature. 49 80 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APY29_RS22655 6def5370844bffb1e52157e0fb712b39 248 Gene3D G3DSA:1.10.10.60 1 72 2.4E-15 T 28-03-2018 APY29_RS22655 6def5370844bffb1e52157e0fb712b39 248 Gene3D G3DSA:1.10.10.60 73 229 1.5E-8 T 28-03-2018 APY29_RS22655 6def5370844bffb1e52157e0fb712b39 248 SUPERFAMILY SSF46689 27 98 9.75E-14 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS19770 ff463d2beac1ab6441cdb4325fbb4a29 301 Pfam PF00990 Diguanylate cyclase, GGDEF domain 135 284 7.6E-29 T 28-03-2018 IPR000160 GGDEF domain APY29_RS19770 ff463d2beac1ab6441cdb4325fbb4a29 301 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 131 286 7.7E-29 T 28-03-2018 IPR000160 GGDEF domain APY29_RS19770 ff463d2beac1ab6441cdb4325fbb4a29 301 SMART SM00267 124 290 4.7E-25 T 28-03-2018 IPR000160 GGDEF domain APY29_RS19770 ff463d2beac1ab6441cdb4325fbb4a29 301 Gene3D G3DSA:3.30.70.270 126 291 6.1E-40 T 28-03-2018 APY29_RS19770 ff463d2beac1ab6441cdb4325fbb4a29 301 SUPERFAMILY SSF55073 140 288 7.61E-34 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS12205 79751aa4621896a49ec76333f2ae1a36 104 SUPERFAMILY SSF48295 5 68 2.77E-15 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 APY29_RS12205 79751aa4621896a49ec76333f2ae1a36 104 Gene3D G3DSA:1.10.10.10 2 81 2.4E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS12205 79751aa4621896a49ec76333f2ae1a36 104 Pfam PF06627 Protein of unknown function (DUF1153) 6 62 9.0E-9 T 28-03-2018 IPR009534 Protein of unknown function DUF1153 APY29_RS02940 3ea58c1db225143de2bbe192d8c455b3 264 SMART SM00448 125 248 1.3E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS02940 3ea58c1db225143de2bbe192d8c455b3 264 SMART SM00448 1 113 6.8E-6 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS02940 3ea58c1db225143de2bbe192d8c455b3 264 SUPERFAMILY SSF52172 1 118 2.7E-20 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS02940 3ea58c1db225143de2bbe192d8c455b3 264 Pfam PF00072 Response regulator receiver domain 1 113 5.8E-13 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS02940 3ea58c1db225143de2bbe192d8c455b3 264 Pfam PF00072 Response regulator receiver domain 127 248 2.1E-16 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS02940 3ea58c1db225143de2bbe192d8c455b3 264 Gene3D G3DSA:3.40.50.2300 1 119 3.8E-20 T 28-03-2018 APY29_RS02940 3ea58c1db225143de2bbe192d8c455b3 264 Gene3D G3DSA:3.40.50.2300 120 263 4.6E-24 T 28-03-2018 APY29_RS02940 3ea58c1db225143de2bbe192d8c455b3 264 SUPERFAMILY SSF52172 125 260 5.55E-24 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS05260 f27401c1ab9cecef3bbbd06e9303c713 385 Pfam PF04055 Radical SAM superfamily 13 178 4.9E-20 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 APY29_RS05260 f27401c1ab9cecef3bbbd06e9303c713 385 Pfam PF06969 HemN C-terminal domain 315 373 2.5E-8 T 28-03-2018 IPR010723 HemN, C-terminal APY29_RS05260 f27401c1ab9cecef3bbbd06e9303c713 385 Gene3D G3DSA:3.20.20.70 2 302 3.5E-46 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS05260 f27401c1ab9cecef3bbbd06e9303c713 385 SMART SM00729 8 225 6.3E-51 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APY29_RS05260 f27401c1ab9cecef3bbbd06e9303c713 385 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 9 357 1.0E-108 T 28-03-2018 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 APY29_RS05260 f27401c1ab9cecef3bbbd06e9303c713 385 SUPERFAMILY SSF102114 4 384 7.32E-107 T 28-03-2018 APY29_RS11060 455b6247aed308579213e35dd94150c6 219 Gene3D G3DSA:3.20.20.70 8 218 1.4E-29 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS11060 455b6247aed308579213e35dd94150c6 219 SUPERFAMILY SSF51569 7 213 1.83E-61 T 28-03-2018 APY29_RS11060 455b6247aed308579213e35dd94150c6 219 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 42 51 - T 28-03-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 APY29_RS11060 455b6247aed308579213e35dd94150c6 219 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 11 211 7.0E-78 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 APY29_RS11060 455b6247aed308579213e35dd94150c6 219 Pfam PF01081 KDPG and KHG aldolase 11 203 1.5E-63 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 APY29_RS17370 911dbdce28bb6f7a95ba5846412cd290 319 Gene3D G3DSA:1.20.272.10 247 312 0.0094 T 28-03-2018 APY29_RS17370 911dbdce28bb6f7a95ba5846412cd290 319 Pfam PF13177 DNA polymerase III, delta subunit 9 170 1.1E-32 T 28-03-2018 APY29_RS17370 911dbdce28bb6f7a95ba5846412cd290 319 SUPERFAMILY SSF52540 7 210 2.37E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17370 911dbdce28bb6f7a95ba5846412cd290 319 Gene3D G3DSA:3.40.50.300 6 169 6.9E-24 T 28-03-2018 APY29_RS17370 911dbdce28bb6f7a95ba5846412cd290 319 Gene3D G3DSA:1.10.8.10 170 211 4.3E-5 T 28-03-2018 APY29_RS19580 19941bf385a474680c46a9548f8d3f59 313 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 169 280 3.5E-22 T 28-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 APY29_RS19580 19941bf385a474680c46a9548f8d3f59 313 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 153 4.6E-42 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 APY29_RS19580 19941bf385a474680c46a9548f8d3f59 313 Gene3D G3DSA:1.10.1040.10 171 307 1.1E-39 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APY29_RS19580 19941bf385a474680c46a9548f8d3f59 313 SUPERFAMILY SSF51735 1 154 1.16E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS19580 19941bf385a474680c46a9548f8d3f59 313 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 28-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 APY29_RS19580 19941bf385a474680c46a9548f8d3f59 313 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 299 6.6E-117 T 28-03-2018 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 APY29_RS19580 19941bf385a474680c46a9548f8d3f59 313 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 234 261 5.3E-38 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 APY29_RS19580 19941bf385a474680c46a9548f8d3f59 313 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 24 5.3E-38 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 APY29_RS19580 19941bf385a474680c46a9548f8d3f59 313 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 59 88 5.3E-38 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 APY29_RS19580 19941bf385a474680c46a9548f8d3f59 313 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 158 186 5.3E-38 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 APY29_RS19580 19941bf385a474680c46a9548f8d3f59 313 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 112 137 5.3E-38 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 APY29_RS19580 19941bf385a474680c46a9548f8d3f59 313 Gene3D G3DSA:3.40.50.720 2 170 2.0E-32 T 28-03-2018 APY29_RS19580 19941bf385a474680c46a9548f8d3f59 313 SUPERFAMILY SSF48179 167 298 5.51E-41 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APY29_RS19580 19941bf385a474680c46a9548f8d3f59 313 SMART SM01350 169 313 2.0E-6 T 28-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 APY29_RS19005 d4e426b036c67804765c44e3040d17ab 313 SUPERFAMILY SSF51261 80 301 2.82E-58 T 28-03-2018 IPR011055 Duplicated hybrid motif APY29_RS19005 d4e426b036c67804765c44e3040d17ab 313 Gene3D G3DSA:2.70.70.10 50 304 4.8E-49 T 28-03-2018 APY29_RS19005 d4e426b036c67804765c44e3040d17ab 313 Pfam PF01551 Peptidase family M23 203 297 2.8E-32 T 28-03-2018 IPR016047 Peptidase M23 APY29_RS09240 466c131b751b60e250c2f32028860184 418 SUPERFAMILY SSF53756 1 411 6.28E-63 T 28-03-2018 APY29_RS09240 466c131b751b60e250c2f32028860184 418 Gene3D G3DSA:3.40.50.2000 257 394 1.8E-20 T 28-03-2018 APY29_RS09240 466c131b751b60e250c2f32028860184 418 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 299 377 6.5E-11 T 28-03-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 APY29_RS09240 466c131b751b60e250c2f32028860184 418 Gene3D G3DSA:3.40.50.2000 1 256 3.5E-27 T 28-03-2018 APY29_RS04725 2d08cf848368a097ed91c98253ca9216 713 Gene3D G3DSA:3.40.50.300 463 712 2.5E-76 T 28-03-2018 APY29_RS04725 2d08cf848368a097ed91c98253ca9216 713 Gene3D G3DSA:3.90.70.10 6 136 1.0E-15 T 28-03-2018 APY29_RS04725 2d08cf848368a097ed91c98253ca9216 713 Gene3D G3DSA:1.20.1560.10 143 462 3.6E-47 T 28-03-2018 APY29_RS04725 2d08cf848368a097ed91c98253ca9216 713 SUPERFAMILY SSF90123 146 453 7.59E-67 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS04725 2d08cf848368a097ed91c98253ca9216 713 Pfam PF03412 Peptidase C39 family 10 133 7.7E-12 T 28-03-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 APY29_RS04725 2d08cf848368a097ed91c98253ca9216 713 ProSitePatterns PS00211 ABC transporters family signature. 610 624 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS04725 2d08cf848368a097ed91c98253ca9216 713 Pfam PF00005 ABC transporter 489 638 8.7E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS04725 2d08cf848368a097ed91c98253ca9216 713 SUPERFAMILY SSF52540 462 709 1.78E-88 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS04725 2d08cf848368a097ed91c98253ca9216 713 Pfam PF00664 ABC transporter transmembrane region 159 427 1.8E-53 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS04725 2d08cf848368a097ed91c98253ca9216 713 SMART SM00382 498 684 6.5E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS04725 2d08cf848368a097ed91c98253ca9216 713 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 16 710 0.0 T 28-03-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 APY29_RS18220 e55dd66850be4d2fe33ee165c128fde3 88 Gene3D G3DSA:3.30.70.100 1 87 5.7E-23 T 28-03-2018 APY29_RS18220 e55dd66850be4d2fe33ee165c128fde3 88 Pfam PF00708 Acylphosphatase 5 85 5.3E-20 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APY29_RS18220 e55dd66850be4d2fe33ee165c128fde3 88 SUPERFAMILY SSF54975 1 86 2.62E-23 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APY29_RS00310 fbe23f2b7f05cf257d4b81664999d1bc 236 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 39 206 3.1E-55 T 28-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 APY29_RS00310 fbe23f2b7f05cf257d4b81664999d1bc 236 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 36 207 5.6E-42 T 28-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 SMART SM01086 769 858 2.1E-38 T 28-03-2018 IPR019489 Clp ATPase, C-terminal APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 4.4E-8 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 5.9E-12 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 769 849 1.7E-26 T 28-03-2018 IPR019489 Clp ATPase, C-terminal APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 858 0.0 T 28-03-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 Gene3D G3DSA:1.10.8.60 343 547 2.4E-46 T 28-03-2018 APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 336 3.2E-13 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 28-03-2018 IPR028299 ClpA/B, conserved site 2 APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 763 1.6E-55 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 SUPERFAMILY SSF81923 4 156 5.3E-40 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 Gene3D G3DSA:3.40.50.300 157 342 2.3E-24 T 28-03-2018 APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 Gene3D G3DSA:1.10.8.60 769 861 4.3E-23 T 28-03-2018 APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 Gene3D G3DSA:3.40.50.300 552 768 4.7E-53 T 28-03-2018 APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 SUPERFAMILY SSF52540 546 858 1.98E-82 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.2E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.2E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.2E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.2E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 Gene3D G3DSA:1.10.1780.10 1 150 1.5E-30 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 SMART SM00382 198 344 2.6E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 SMART SM00382 597 770 1.2E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS06095 c698d7132284271cb1b36e5f094405eb 861 SUPERFAMILY SSF52540 159 545 3.82E-100 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS19170 ffc3ace3c159b776ecd3a5ab754658ff 682 SUPERFAMILY SSF81653 116 210 1.7E-21 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 APY29_RS19170 ffc3ace3c159b776ecd3a5ab754658ff 682 Gene3D G3DSA:3.40.1110.10 319 443 9.8E-22 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 APY29_RS19170 ffc3ace3c159b776ecd3a5ab754658ff 682 SUPERFAMILY SSF56784 304 319 1.57E-37 T 28-03-2018 IPR023214 HAD-like domain APY29_RS19170 ffc3ace3c159b776ecd3a5ab754658ff 682 SUPERFAMILY SSF56784 346 564 1.57E-37 T 28-03-2018 IPR023214 HAD-like domain APY29_RS19170 ffc3ace3c159b776ecd3a5ab754658ff 682 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 14 676 4.3E-284 T 28-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 APY29_RS19170 ffc3ace3c159b776ecd3a5ab754658ff 682 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 17 680 39.962 T 28-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 APY29_RS19170 ffc3ace3c159b776ecd3a5ab754658ff 682 Pfam PF00702 haloacid dehalogenase-like hydrolase 304 530 1.4E-33 T 28-03-2018 APY29_RS19170 ffc3ace3c159b776ecd3a5ab754658ff 682 SUPERFAMILY SSF81665 42 107 1.19E-7 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 APY29_RS19170 ffc3ace3c159b776ecd3a5ab754658ff 682 SUPERFAMILY SSF81665 211 302 1.19E-7 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 APY29_RS19170 ffc3ace3c159b776ecd3a5ab754658ff 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 551 2.1E-22 T 28-03-2018 APY29_RS19170 ffc3ace3c159b776ecd3a5ab754658ff 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 473 2.1E-22 T 28-03-2018 APY29_RS19170 ffc3ace3c159b776ecd3a5ab754658ff 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 535 2.1E-22 T 28-03-2018 APY29_RS19170 ffc3ace3c159b776ecd3a5ab754658ff 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 157 171 2.1E-22 T 28-03-2018 APY29_RS19170 ffc3ace3c159b776ecd3a5ab754658ff 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 308 322 2.1E-22 T 28-03-2018 APY29_RS19170 ffc3ace3c159b776ecd3a5ab754658ff 682 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 310 316 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 APY29_RS19170 ffc3ace3c159b776ecd3a5ab754658ff 682 Gene3D G3DSA:2.70.150.10 7 211 1.3E-26 T 28-03-2018 APY29_RS19170 ffc3ace3c159b776ecd3a5ab754658ff 682 Gene3D G3DSA:3.40.50.1000 444 573 2.7E-32 T 28-03-2018 IPR023214 HAD-like domain APY29_RS19170 ffc3ace3c159b776ecd3a5ab754658ff 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 373 605 5.2E-41 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 APY29_RS19170 ffc3ace3c159b776ecd3a5ab754658ff 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 78 344 1.2E-32 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 APY29_RS19170 ffc3ace3c159b776ecd3a5ab754658ff 682 Pfam PF00122 E1-E2 ATPase 113 285 7.6E-34 T 28-03-2018 APY29_RS18700 7ad99d25dc815a7c882de3ee247f6999 357 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 51 64 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APY29_RS18700 7ad99d25dc815a7c882de3ee247f6999 357 Gene3D G3DSA:3.40.50.300 23 198 5.4E-25 T 28-03-2018 APY29_RS18700 7ad99d25dc815a7c882de3ee247f6999 357 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 240 249 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site APY29_RS18700 7ad99d25dc815a7c882de3ee247f6999 357 SUPERFAMILY SSF46689 240 347 1.08E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS18700 7ad99d25dc815a7c882de3ee247f6999 357 Pfam PF00158 Sigma-54 interaction domain 30 193 3.7E-67 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APY29_RS18700 7ad99d25dc815a7c882de3ee247f6999 357 SUPERFAMILY SSF52540 28 268 4.2E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS18700 7ad99d25dc815a7c882de3ee247f6999 357 Gene3D G3DSA:1.10.8.60 200 271 2.9E-22 T 28-03-2018 APY29_RS18700 7ad99d25dc815a7c882de3ee247f6999 357 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 113 128 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APY29_RS18700 7ad99d25dc815a7c882de3ee247f6999 357 Gene3D G3DSA:1.10.10.60 273 348 3.6E-7 T 28-03-2018 APY29_RS18700 7ad99d25dc815a7c882de3ee247f6999 357 SMART SM00382 47 190 1.9E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS08765 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 346 426 6.9E-30 T 28-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08765 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 SMART SM00928 343 388 4.4E-26 T 28-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08765 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 Pfam PF10531 SLBB domain 257 305 6.5E-11 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08765 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 SUPERFAMILY SSF140490 339 437 4.71E-35 T 28-03-2018 APY29_RS08765 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 356 367 - T 28-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08765 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 SUPERFAMILY SSF142019 19 252 3.27E-78 T 28-03-2018 APY29_RS08765 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 Gene3D G3DSA:3.10.560.10 246 327 1.9E-5 T 28-03-2018 APY29_RS08765 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 181 196 - T 28-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08765 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 62 233 2.1E-42 T 28-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08765 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 21 429 4.4E-198 T 28-03-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08765 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 SUPERFAMILY SSF142984 255 338 5.36E-22 T 28-03-2018 APY29_RS00180 802d0341726a389f4cdf4f985f4e9d9a 508 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 63 371 1.4E-94 T 28-03-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 APY29_RS00180 802d0341726a389f4cdf4f985f4e9d9a 508 Gene3D G3DSA:2.30.42.10 114 179 7.9E-16 T 28-03-2018 APY29_RS00180 802d0341726a389f4cdf4f985f4e9d9a 508 Pfam PF13180 PDZ domain 111 188 2.0E-13 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS00180 802d0341726a389f4cdf4f985f4e9d9a 508 Pfam PF03572 Peptidase family S41 207 368 1.5E-54 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 APY29_RS00180 802d0341726a389f4cdf4f985f4e9d9a 508 SUPERFAMILY SSF52096 200 375 9.11E-75 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS00180 802d0341726a389f4cdf4f985f4e9d9a 508 SUPERFAMILY SSF52096 50 129 9.11E-75 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS00180 802d0341726a389f4cdf4f985f4e9d9a 508 SMART SM00245 181 371 7.8E-71 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 APY29_RS00180 802d0341726a389f4cdf4f985f4e9d9a 508 Gene3D G3DSA:3.90.226.10 180 452 6.6E-66 T 28-03-2018 APY29_RS00180 802d0341726a389f4cdf4f985f4e9d9a 508 SMART SM00228 110 179 2.8E-9 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS00180 802d0341726a389f4cdf4f985f4e9d9a 508 Gene3D G3DSA:3.30.750.44 45 113 2.0E-15 T 28-03-2018 APY29_RS00180 802d0341726a389f4cdf4f985f4e9d9a 508 SUPERFAMILY SSF50156 105 191 3.11E-15 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS16350 9c00825c9fb7a1dbcd6cf6333b51d0dc 85 SUPERFAMILY SSF54565 1 78 6.93E-29 T 28-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS16350 9c00825c9fb7a1dbcd6cf6333b51d0dc 85 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.433 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS16350 9c00825c9fb7a1dbcd6cf6333b51d0dc 85 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 5.6E-31 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS16350 9c00825c9fb7a1dbcd6cf6333b51d0dc 85 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 28-03-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS16350 9c00825c9fb7a1dbcd6cf6333b51d0dc 85 Pfam PF00886 Ribosomal protein S16 8 68 6.9E-24 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS16350 9c00825c9fb7a1dbcd6cf6333b51d0dc 85 Gene3D G3DSA:3.30.1320.10 1 79 3.3E-31 T 28-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS01505 80e5a98a7d6bc559641c42575227a25c 444 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 4 443 1.6E-160 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 APY29_RS01505 80e5a98a7d6bc559641c42575227a25c 444 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 442 7.9E-152 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 APY29_RS03325 c5092689811b2b80257e92490989591a 885 Gene3D G3DSA:1.20.120.290 498 572 3.0E-14 T 28-03-2018 APY29_RS03325 c5092689811b2b80257e92490989591a 885 Gene3D G3DSA:1.20.120.290 383 435 0.037 T 28-03-2018 APY29_RS03325 c5092689811b2b80257e92490989591a 885 Gene3D G3DSA:1.20.120.290 436 497 0.0023 T 28-03-2018 APY29_RS03325 c5092689811b2b80257e92490989591a 885 Gene3D G3DSA:1.20.120.290 573 645 9.5E-17 T 28-03-2018 APY29_RS03325 c5092689811b2b80257e92490989591a 885 Gene3D G3DSA:1.20.120.290 646 737 0.009 T 28-03-2018 APY29_RS03325 c5092689811b2b80257e92490989591a 885 Gene3D G3DSA:1.20.120.290 309 382 7.6E-6 T 28-03-2018 APY29_RS03325 c5092689811b2b80257e92490989591a 885 Pfam PF05650 Domain of unknown function (DUF802) 383 427 8.8E-7 T 28-03-2018 IPR008520 Domain of unknown function DUF802 APY29_RS03325 c5092689811b2b80257e92490989591a 885 Pfam PF05650 Domain of unknown function (DUF802) 507 559 1.6E-17 T 28-03-2018 IPR008520 Domain of unknown function DUF802 APY29_RS03325 c5092689811b2b80257e92490989591a 885 Pfam PF05650 Domain of unknown function (DUF802) 445 489 8.3E-5 T 28-03-2018 IPR008520 Domain of unknown function DUF802 APY29_RS03325 c5092689811b2b80257e92490989591a 885 Pfam PF05650 Domain of unknown function (DUF802) 562 614 1.4E-10 T 28-03-2018 IPR008520 Domain of unknown function DUF802 APY29_RS03325 c5092689811b2b80257e92490989591a 885 Pfam PF05650 Domain of unknown function (DUF802) 321 364 2.4E-8 T 28-03-2018 IPR008520 Domain of unknown function DUF802 APY29_RS03325 c5092689811b2b80257e92490989591a 885 Gene3D G3DSA:1.20.120.20 738 870 0.37 T 28-03-2018 APY29_RS20700 ba8fa66f3368964a2637a540ed38e3a7 265 Gene3D G3DSA:3.20.20.70 11 264 1.3E-73 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS20700 ba8fa66f3368964a2637a540ed38e3a7 265 SUPERFAMILY SSF51366 12 262 2.94E-89 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APY29_RS20700 ba8fa66f3368964a2637a540ed38e3a7 265 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 28-03-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 APY29_RS20700 ba8fa66f3368964a2637a540ed38e3a7 265 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 260 7.3E-95 T 28-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 APY29_RS20700 ba8fa66f3368964a2637a540ed38e3a7 265 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 36.075 T 28-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 APY29_RS15625 adf566304d4357a3ce5e3037af4124a3 256 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 40 157 1.2E-23 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 APY29_RS15625 adf566304d4357a3ce5e3037af4124a3 256 Gene3D G3DSA:2.60.40.10 163 248 2.3E-5 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS15625 adf566304d4357a3ce5e3037af4124a3 256 SUPERFAMILY SSF49354 35 157 1.47E-25 T 28-03-2018 IPR008962 PapD-like APY29_RS15625 adf566304d4357a3ce5e3037af4124a3 256 Gene3D G3DSA:2.60.40.10 39 158 1.3E-26 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS13325 7203740bf4f69e60d8585655b5ccc798 158 SUPERFAMILY SSF54534 83 156 6.8E-22 T 28-03-2018 APY29_RS13325 7203740bf4f69e60d8585655b5ccc798 158 Gene3D G3DSA:3.10.50.30 75 157 6.5E-26 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APY29_RS13325 7203740bf4f69e60d8585655b5ccc798 158 Gene3D G3DSA:1.10.287.180 2 74 5.8E-33 T 28-03-2018 APY29_RS13325 7203740bf4f69e60d8585655b5ccc798 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 156 3.8E-26 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APY29_RS13325 7203740bf4f69e60d8585655b5ccc798 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 3.5E-32 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APY29_RS13325 7203740bf4f69e60d8585655b5ccc798 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 1 155 33.404 T 28-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 APY29_RS13325 7203740bf4f69e60d8585655b5ccc798 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 4 154 5.8E-58 T 28-03-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 APY29_RS13325 7203740bf4f69e60d8585655b5ccc798 158 SUPERFAMILY SSF46557 4 77 3.66E-29 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APY29_RS13325 7203740bf4f69e60d8585655b5ccc798 158 PIRSF PIRSF006092 1 158 1.0E-50 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 APY29_RS13325 7203740bf4f69e60d8585655b5ccc798 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 16 47 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APY29_RS21945 974902f8cd5409765a22e02d3c75690e 115 SUPERFAMILY SSF54593 6 114 1.88E-22 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS21945 974902f8cd5409765a22e02d3c75690e 115 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 109 1.7E-5 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APY29_RS21945 974902f8cd5409765a22e02d3c75690e 115 Gene3D G3DSA:3.10.180.10 3 115 8.6E-18 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS16130 998671e0281b43f025151d5f5e669bf8 164 SMART SM01118 2 155 1.3E-22 T 28-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 APY29_RS16130 998671e0281b43f025151d5f5e669bf8 164 SUPERFAMILY SSF55154 1 155 2.94E-41 T 28-03-2018 IPR033469 CYTH-like domain Reactome: R-HSA-196819 APY29_RS16130 998671e0281b43f025151d5f5e669bf8 164 Gene3D G3DSA:2.40.320.10 1 158 3.2E-39 T 28-03-2018 APY29_RS16130 998671e0281b43f025151d5f5e669bf8 164 PIRSF PIRSF016487 1 164 1.6E-61 T 28-03-2018 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like APY29_RS16130 998671e0281b43f025151d5f5e669bf8 164 Pfam PF01928 CYTH domain 4 144 6.1E-18 T 28-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 APY29_RS10955 1f82aea91c140bb84fb27afac1364105 403 SUPERFAMILY SSF51905 29 252 5.63E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS10955 1f82aea91c140bb84fb27afac1364105 403 SUPERFAMILY SSF51905 345 391 5.63E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS10955 1f82aea91c140bb84fb27afac1364105 403 Gene3D G3DSA:3.50.50.60 18 397 8.1E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS10955 1f82aea91c140bb84fb27afac1364105 403 Pfam PF01266 FAD dependent oxidoreductase 31 380 1.8E-48 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APY29_RS23355 82ea4680bed88da1e5585414cf608c42 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 4 23 - T 28-03-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS23355 82ea4680bed88da1e5585414cf608c42 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 3 46 16.576 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS23355 82ea4680bed88da1e5585414cf608c42 46 Pfam PF00468 Ribosomal protein L34 3 46 5.2E-25 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS23355 82ea4680bed88da1e5585414cf608c42 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 46 1.2E-25 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS23355 82ea4680bed88da1e5585414cf608c42 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 4 28 1.0E-7 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS22480 05ad6b2470684629b30d225c6c7c9487 593 Pfam PF01103 Surface antigen 304 582 2.7E-32 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 APY29_RS22480 05ad6b2470684629b30d225c6c7c9487 593 Pfam PF07244 Surface antigen variable number repeat 119 190 1.9E-5 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 APY29_RS22480 05ad6b2470684629b30d225c6c7c9487 593 Pfam PF17243 POTRA domain TamA domain 1 28 108 7.1E-17 T 28-03-2018 IPR035243 TamA, POTRA domain 1 APY29_RS22480 05ad6b2470684629b30d225c6c7c9487 593 Gene3D G3DSA:2.40.160.50 230 592 5.1E-61 T 28-03-2018 APY29_RS22480 05ad6b2470684629b30d225c6c7c9487 593 Gene3D G3DSA:3.10.20.310 24 111 0.0052 T 28-03-2018 APY29_RS22480 05ad6b2470684629b30d225c6c7c9487 593 Gene3D G3DSA:3.10.20.310 112 198 5.9E-16 T 28-03-2018 APY29_RS22390 cc2ab57e052a08b9d6f4b36d3036d739 251 Gene3D G3DSA:3.40.50.720 1 249 9.4E-67 T 28-03-2018 APY29_RS22390 cc2ab57e052a08b9d6f4b36d3036d739 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 8.4E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS22390 cc2ab57e052a08b9d6f4b36d3036d739 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 8.4E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS22390 cc2ab57e052a08b9d6f4b36d3036d739 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 8.4E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS22390 cc2ab57e052a08b9d6f4b36d3036d739 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 8.4E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS22390 cc2ab57e052a08b9d6f4b36d3036d739 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 8.4E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS22390 cc2ab57e052a08b9d6f4b36d3036d739 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 8.4E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS22390 cc2ab57e052a08b9d6f4b36d3036d739 251 SUPERFAMILY SSF51735 5 250 1.03E-75 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS22390 cc2ab57e052a08b9d6f4b36d3036d739 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APY29_RS22390 cc2ab57e052a08b9d6f4b36d3036d739 251 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 5 251 1.8E-124 T 28-03-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 APY29_RS22390 cc2ab57e052a08b9d6f4b36d3036d739 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.1E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS22390 cc2ab57e052a08b9d6f4b36d3036d739 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.1E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS22390 cc2ab57e052a08b9d6f4b36d3036d739 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.1E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS22390 cc2ab57e052a08b9d6f4b36d3036d739 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 248 1.6E-56 T 28-03-2018 APY29_RS07840 4bc4340b463265b49b16c3e7748ea1f9 180 Gene3D G3DSA:3.40.630.30 12 180 2.1E-22 T 28-03-2018 APY29_RS07840 4bc4340b463265b49b16c3e7748ea1f9 180 SUPERFAMILY SSF55729 24 167 3.01E-17 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS07840 4bc4340b463265b49b16c3e7748ea1f9 180 Pfam PF13302 Acetyltransferase (GNAT) domain 22 161 5.5E-8 T 28-03-2018 IPR000182 GNAT domain GO:0008080 APY29_RS12150 a48077218692a6bd238350dec4e82567 91 Pfam PF04193 PQ loop repeat 4 58 3.5E-5 T 28-03-2018 IPR006603 PQ-loop repeat APY29_RS15010 cf3b875decff4095ab23ee8826a0bba1 436 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 25 421 1.7E-90 T 28-03-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 APY29_RS15010 cf3b875decff4095ab23ee8826a0bba1 436 Pfam PF07690 Major Facilitator Superfamily 31 387 1.7E-21 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS15010 cf3b875decff4095ab23ee8826a0bba1 436 Gene3D G3DSA:1.20.1250.20 19 239 8.3E-26 T 28-03-2018 APY29_RS15010 cf3b875decff4095ab23ee8826a0bba1 436 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 104 420 7.1E-94 T 28-03-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 APY29_RS15010 cf3b875decff4095ab23ee8826a0bba1 436 SUPERFAMILY SSF103473 23 424 1.83E-38 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS15010 cf3b875decff4095ab23ee8826a0bba1 436 Gene3D G3DSA:1.20.1250.20 240 428 2.8E-18 T 28-03-2018 APY29_RS06740 6447775662692f247957c35b514418b2 355 Pfam PF00704 Glycosyl hydrolases family 18 48 340 5.4E-27 T 28-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 APY29_RS06740 6447775662692f247957c35b514418b2 355 Gene3D G3DSA:3.20.20.80 21 354 1.3E-47 T 28-03-2018 APY29_RS06740 6447775662692f247957c35b514418b2 355 SUPERFAMILY SSF51445 314 346 2.02E-42 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS06740 6447775662692f247957c35b514418b2 355 SUPERFAMILY SSF51445 46 248 2.02E-42 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS06740 6447775662692f247957c35b514418b2 355 SMART SM00636 28 342 1.8E-20 T 28-03-2018 IPR011583 Chitinase II GO:0008061 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 Gene3D G3DSA:1.20.1640.10 821 1031 3.6E-36 T 28-03-2018 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 Gene3D G3DSA:1.20.1640.10 275 499 2.3E-43 T 28-03-2018 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 Gene3D G3DSA:3.30.70.1430 565 664 3.6E-20 T 28-03-2018 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 SUPERFAMILY SSF82866 833 1028 6.28E-45 T 28-03-2018 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 PRINTS PR00702 Acriflavin resistance protein family signature 617 631 2.6E-99 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.6E-99 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.6E-99 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.6E-99 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 2.6E-99 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.6E-99 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.6E-99 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.6E-99 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.6E-99 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 Pfam PF00873 AcrB/AcrD/AcrF family 1 1028 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 SUPERFAMILY SSF82693 809 858 3.4E-25 T 28-03-2018 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 SUPERFAMILY SSF82693 665 715 3.4E-25 T 28-03-2018 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 SUPERFAMILY SSF82693 38 132 3.79E-27 T 28-03-2018 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 SUPERFAMILY SSF82714 182 271 3.4E-22 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 SUPERFAMILY SSF82866 296 497 8.89E-46 T 28-03-2018 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 SUPERFAMILY SSF82693 563 664 4.87E-28 T 28-03-2018 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 Gene3D G3DSA:3.30.70.1440 665 762 1.8E-14 T 28-03-2018 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 Gene3D G3DSA:3.30.70.1430 38 140 2.5E-27 T 28-03-2018 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 SUPERFAMILY SSF82714 716 809 4.58E-15 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 Gene3D G3DSA:3.30.2090.10 180 274 1.2E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1040 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 SUPERFAMILY SSF82693 135 182 7.85E-21 T 28-03-2018 APY29_RS09655 f51fb8e230446938d17c96cb548bcb32 1056 SUPERFAMILY SSF82693 274 330 7.85E-21 T 28-03-2018 APY29_RS18815 d8fd271fb2dbfb661c261085212182f0 81 Gene3D G3DSA:2.10.70.10 45 81 9.5E-18 T 28-03-2018 APY29_RS18815 d8fd271fb2dbfb661c261085212182f0 81 Pfam PF10636 Hemin uptake protein hemP 46 81 5.7E-18 T 28-03-2018 IPR019600 Hemin uptake protein HemP APY29_RS05715 c12d1a3ec5d9fdc443e5d2f9f473e1d5 472 SUPERFAMILY SSF53187 49 93 6.56E-49 T 28-03-2018 APY29_RS05715 c12d1a3ec5d9fdc443e5d2f9f473e1d5 472 SUPERFAMILY SSF53187 247 456 6.56E-49 T 28-03-2018 APY29_RS05715 c12d1a3ec5d9fdc443e5d2f9f473e1d5 472 Pfam PF04389 Peptidase family M28 255 444 7.9E-24 T 28-03-2018 IPR007484 Peptidase M28 APY29_RS05715 c12d1a3ec5d9fdc443e5d2f9f473e1d5 472 Gene3D G3DSA:3.40.630.10 42 462 2.9E-46 T 28-03-2018 APY29_RS04305 1ed0ede21da70fecb1dd19c499827511 370 Pfam PF02405 Permease MlaE 154 362 1.9E-67 T 28-03-2018 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 APY29_RS04305 1ed0ede21da70fecb1dd19c499827511 370 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 129 366 1.0E-70 T 28-03-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria APY29_RS14925 c36be320147d3d65f095b421f5da6ad7 213 SMART SM00479 26 211 9.9E-23 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III APY29_RS14925 c36be320147d3d65f095b421f5da6ad7 213 Pfam PF00929 Exonuclease 28 202 1.0E-23 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III APY29_RS14925 c36be320147d3d65f095b421f5da6ad7 213 TIGRFAM TIGR01298 RNaseT: ribonuclease T 18 210 1.6E-99 T 28-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 APY29_RS14925 c36be320147d3d65f095b421f5da6ad7 213 SUPERFAMILY SSF53098 17 210 4.61E-53 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS14925 c36be320147d3d65f095b421f5da6ad7 213 Gene3D G3DSA:3.30.420.10 18 211 5.5E-28 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS14925 c36be320147d3d65f095b421f5da6ad7 213 Hamap MF_00157 Ribonuclease T [rnt]. 1 213 85.305 T 28-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 APY29_RS00960 6987abe2ca471f6c5f79b8b7dc8b90d3 991 Pfam PF08751 TrwC relaxase 15 286 1.6E-81 T 28-03-2018 IPR014862 TrwC relaxase APY29_RS00960 6987abe2ca471f6c5f79b8b7dc8b90d3 991 SUPERFAMILY SSF52540 482 635 5.94E-20 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS00960 6987abe2ca471f6c5f79b8b7dc8b90d3 991 Pfam PF13538 UvrD-like helicase C-terminal domain 871 917 9.9E-7 T 28-03-2018 IPR027785 UvrD-like helicase C-terminal domain APY29_RS00960 6987abe2ca471f6c5f79b8b7dc8b90d3 991 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 15 290 3.7E-89 T 28-03-2018 IPR014059 Conjugative relaxase, N-terminal APY29_RS00960 6987abe2ca471f6c5f79b8b7dc8b90d3 991 SUPERFAMILY SSF52540 599 658 1.37E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS00960 6987abe2ca471f6c5f79b8b7dc8b90d3 991 SUPERFAMILY SSF52540 804 921 1.37E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS00960 6987abe2ca471f6c5f79b8b7dc8b90d3 991 SUPERFAMILY SSF52540 693 725 1.37E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS00960 6987abe2ca471f6c5f79b8b7dc8b90d3 991 Pfam PF13604 AAA domain 486 668 1.8E-41 T 28-03-2018 APY29_RS00960 6987abe2ca471f6c5f79b8b7dc8b90d3 991 Gene3D G3DSA:3.40.50.300 412 666 4.7E-19 T 28-03-2018 APY29_RS00960 6987abe2ca471f6c5f79b8b7dc8b90d3 991 SUPERFAMILY SSF55464 3 291 1.24E-93 T 28-03-2018 APY29_RS15450 5d01aca657b6027ee04ff90c342c979d 211 Pfam PF14497 Glutathione S-transferase, C-terminal domain 111 199 7.0E-8 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal APY29_RS15450 5d01aca657b6027ee04ff90c342c979d 211 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 70 9.3E-13 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APY29_RS15450 5d01aca657b6027ee04ff90c342c979d 211 Gene3D G3DSA:1.20.1050.10 99 202 6.2E-22 T 28-03-2018 APY29_RS15450 5d01aca657b6027ee04ff90c342c979d 211 SUPERFAMILY SSF52833 3 84 3.16E-21 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS15450 5d01aca657b6027ee04ff90c342c979d 211 SUPERFAMILY SSF47616 82 202 9.05E-23 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like APY29_RS15450 5d01aca657b6027ee04ff90c342c979d 211 Gene3D G3DSA:3.40.30.10 2 98 1.3E-24 T 28-03-2018 APY29_RS15470 053891859e887d01d9a25f29b69d11fd 161 PRINTS PR01011 Glutathione peroxidase family signature 22 39 3.9E-20 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 APY29_RS15470 053891859e887d01d9a25f29b69d11fd 161 PRINTS PR01011 Glutathione peroxidase family signature 123 132 3.9E-20 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 APY29_RS15470 053891859e887d01d9a25f29b69d11fd 161 PRINTS PR01011 Glutathione peroxidase family signature 57 73 3.9E-20 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 APY29_RS15470 053891859e887d01d9a25f29b69d11fd 161 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 28-03-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 APY29_RS15470 053891859e887d01d9a25f29b69d11fd 161 PIRSF PIRSF000303 1 161 3.0E-64 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 APY29_RS15470 053891859e887d01d9a25f29b69d11fd 161 Gene3D G3DSA:3.40.30.10 3 161 8.3E-46 T 28-03-2018 APY29_RS15470 053891859e887d01d9a25f29b69d11fd 161 SUPERFAMILY SSF52833 4 159 7.34E-61 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS15470 053891859e887d01d9a25f29b69d11fd 161 Pfam PF00255 Glutathione peroxidase 6 111 1.1E-39 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 APY29_RS18965 d2d111e1f132fae6f8cc826a64c5607d 585 Pfam PF09286 Pro-kumamolisin, activation domain 74 168 6.2E-10 T 28-03-2018 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 APY29_RS18965 d2d111e1f132fae6f8cc826a64c5607d 585 Gene3D G3DSA:3.40.50.200 233 583 4.0E-26 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS18965 d2d111e1f132fae6f8cc826a64c5607d 585 SUPERFAMILY SSF52743 208 576 3.01E-52 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS18965 d2d111e1f132fae6f8cc826a64c5607d 585 Pfam PF00082 Subtilase family 312 569 1.3E-12 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS18965 d2d111e1f132fae6f8cc826a64c5607d 585 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 499 509 - T 28-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site APY29_RS18965 d2d111e1f132fae6f8cc826a64c5607d 585 SMART SM00944 30 170 1.8E-24 T 28-03-2018 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 APY29_RS18965 d2d111e1f132fae6f8cc826a64c5607d 585 SUPERFAMILY SSF54897 31 171 3.4E-23 T 28-03-2018 IPR009020 Protease propeptides/proteinase inhibitor I9 APY29_RS16200 bcc7920fb64961c00bade405e90afb42 295 SUPERFAMILY SSF51735 1 162 2.25E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS16200 bcc7920fb64961c00bade405e90afb42 295 Gene3D G3DSA:1.10.1040.10 164 295 5.7E-31 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APY29_RS16200 bcc7920fb64961c00bade405e90afb42 295 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 3.7E-51 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 APY29_RS16200 bcc7920fb64961c00bade405e90afb42 295 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 28-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 APY29_RS16200 bcc7920fb64961c00bade405e90afb42 295 Gene3D G3DSA:3.40.50.720 1 163 9.3E-37 T 28-03-2018 APY29_RS16200 bcc7920fb64961c00bade405e90afb42 295 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 291 2.2E-33 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 APY29_RS16200 bcc7920fb64961c00bade405e90afb42 295 SUPERFAMILY SSF48179 163 294 5.89E-39 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APY29_RS16200 bcc7920fb64961c00bade405e90afb42 295 PIRSF PIRSF000103 1 295 4.3E-80 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 APY29_RS16200 bcc7920fb64961c00bade405e90afb42 295 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 292 2.1E-121 T 28-03-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 APY29_RS04835 70ea703f3ff3f97b8909767e5770cc85 463 SMART SM00388 242 307 5.3E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS04835 70ea703f3ff3f97b8909767e5770cc85 463 SUPERFAMILY SSF55874 298 459 4.98E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS04835 70ea703f3ff3f97b8909767e5770cc85 463 Gene3D G3DSA:1.10.287.130 232 302 3.0E-11 T 28-03-2018 APY29_RS04835 70ea703f3ff3f97b8909767e5770cc85 463 Pfam PF08521 Two-component sensor kinase N-terminal 25 165 4.2E-38 T 28-03-2018 IPR013727 Two-component sensor kinase, N-terminal APY29_RS04835 70ea703f3ff3f97b8909767e5770cc85 463 SMART SM00387 352 462 2.8E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS04835 70ea703f3ff3f97b8909767e5770cc85 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 459 5.4E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS04835 70ea703f3ff3f97b8909767e5770cc85 463 Gene3D G3DSA:3.30.565.10 311 462 1.5E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS04835 70ea703f3ff3f97b8909767e5770cc85 463 SUPERFAMILY SSF47384 225 300 2.75E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS04835 70ea703f3ff3f97b8909767e5770cc85 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 2.9E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS04835 70ea703f3ff3f97b8909767e5770cc85 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 2.9E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS04835 70ea703f3ff3f97b8909767e5770cc85 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 459 2.9E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS04835 70ea703f3ff3f97b8909767e5770cc85 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 2.9E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS04835 70ea703f3ff3f97b8909767e5770cc85 463 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 300 7.1E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS12440 80ab678ecd17c90afe5495bfb1eb3bbd 176 SUPERFAMILY SSF55961 17 156 9.03E-13 T 28-03-2018 APY29_RS12440 80ab678ecd17c90afe5495bfb1eb3bbd 176 Gene3D G3DSA:3.30.530.20 4 162 2.4E-12 T 28-03-2018 IPR023393 START-like domain APY29_RS14520 68d7fcbb14aa0987b1327b15d0fb54a5 186 Gene3D G3DSA:1.20.120.20 8 179 1.9E-5 T 28-03-2018 APY29_RS14520 68d7fcbb14aa0987b1327b15d0fb54a5 186 TIGRFAM TIGR01837 PHA_granule_1: poly(hydroxyalkanoate) granule-associated protein 28 144 1.1E-48 T 28-03-2018 IPR008769 Poly granule associated APY29_RS14520 68d7fcbb14aa0987b1327b15d0fb54a5 186 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 20 142 2.0E-40 T 28-03-2018 IPR008769 Poly granule associated APY29_RS14625 b7733cb37d21ada94a31ea6e42548a2a 1167 Gene3D G3DSA:3.40.50.300 1 183 1.6E-34 T 28-03-2018 APY29_RS14625 b7733cb37d21ada94a31ea6e42548a2a 1167 Gene3D G3DSA:1.20.5.730 427 507 0.075 T 28-03-2018 APY29_RS14625 b7733cb37d21ada94a31ea6e42548a2a 1167 SUPERFAMILY SSF57997 658 855 3.4E-5 T 28-03-2018 APY29_RS14625 b7733cb37d21ada94a31ea6e42548a2a 1167 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1157 0.0 T 28-03-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 APY29_RS14625 b7733cb37d21ada94a31ea6e42548a2a 1167 PIRSF PIRSF005719 1 1165 2.1E-264 T 28-03-2018 IPR024704 Structural maintenance of chromosomes protein APY29_RS14625 b7733cb37d21ada94a31ea6e42548a2a 1167 SUPERFAMILY SSF75553 485 668 3.14E-8 T 28-03-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 APY29_RS14625 b7733cb37d21ada94a31ea6e42548a2a 1167 SMART SM00968 521 619 0.0031 T 28-03-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 APY29_RS14625 b7733cb37d21ada94a31ea6e42548a2a 1167 Gene3D G3DSA:1.20.5.340 649 759 3.0E-6 T 28-03-2018 APY29_RS14625 b7733cb37d21ada94a31ea6e42548a2a 1167 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1159 23.255 T 28-03-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 APY29_RS14625 b7733cb37d21ada94a31ea6e42548a2a 1167 Gene3D G3DSA:1.10.287.620 232 391 8.1E-10 T 28-03-2018 APY29_RS14625 b7733cb37d21ada94a31ea6e42548a2a 1167 SUPERFAMILY SSF52540 959 1159 3.71E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS14625 b7733cb37d21ada94a31ea6e42548a2a 1167 SUPERFAMILY SSF52540 1 210 3.71E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS14625 b7733cb37d21ada94a31ea6e42548a2a 1167 Gene3D G3DSA:3.40.50.300 767 1162 7.5E-25 T 28-03-2018 APY29_RS14625 b7733cb37d21ada94a31ea6e42548a2a 1167 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1150 2.8E-67 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal APY29_RS17040 4ebb27b8769bd75e490a3ad5a354bdb0 141 Gene3D G3DSA:1.10.3290.10 17 129 9.9E-9 T 28-03-2018 IPR003812 Fido domain APY29_RS17040 4ebb27b8769bd75e490a3ad5a354bdb0 141 PIRSF PIRSF018297 1 132 9.6E-39 T 28-03-2018 IPR006440 Death on curing protein GO:0016301 APY29_RS17040 4ebb27b8769bd75e490a3ad5a354bdb0 141 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 12 122 5.6E-15 T 28-03-2018 IPR006440 Death on curing protein GO:0016301 APY29_RS17040 4ebb27b8769bd75e490a3ad5a354bdb0 141 Pfam PF02661 Fic/DOC family 4 86 9.4E-11 T 28-03-2018 IPR003812 Fido domain APY29_RS17040 4ebb27b8769bd75e490a3ad5a354bdb0 141 SUPERFAMILY SSF140931 24 122 1.15E-6 T 28-03-2018 IPR003812 Fido domain APY29_RS14630 f295f91ae547529402495a3a091bf442 149 SUPERFAMILY SSF55653 61 147 1.31E-21 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal APY29_RS14630 f295f91ae547529402495a3a091bf442 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 23.689 T 28-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS14630 f295f91ae547529402495a3a091bf442 149 SUPERFAMILY SSF55658 1 57 7.85E-18 T 28-03-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal APY29_RS14630 f295f91ae547529402495a3a091bf442 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 1.6E-41 T 28-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS14630 f295f91ae547529402495a3a091bf442 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS14630 f295f91ae547529402495a3a091bf442 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.0E-20 T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS14630 f295f91ae547529402495a3a091bf442 149 Gene3D G3DSA:3.40.5.10 1 49 1.7E-21 T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS14630 f295f91ae547529402495a3a091bf442 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 146 4.3E-21 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal APY29_RS14630 f295f91ae547529402495a3a091bf442 149 Gene3D G3DSA:3.10.430.100 63 147 2.9E-22 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal APY29_RS01660 9a723c3b490d8e2ed77dddbd00a7dc5d 788 Pfam PF03176 MMPL family 191 415 2.9E-7 T 28-03-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 APY29_RS01660 9a723c3b490d8e2ed77dddbd00a7dc5d 788 Gene3D G3DSA:1.20.1640.10 607 772 1.6E-16 T 28-03-2018 APY29_RS01660 9a723c3b490d8e2ed77dddbd00a7dc5d 788 Gene3D G3DSA:1.20.1640.10 204 394 4.3E-18 T 28-03-2018 APY29_RS01660 9a723c3b490d8e2ed77dddbd00a7dc5d 788 SUPERFAMILY SSF82866 214 393 1.96E-19 T 28-03-2018 APY29_RS01660 9a723c3b490d8e2ed77dddbd00a7dc5d 788 SUPERFAMILY SSF82866 613 770 6.8E-17 T 28-03-2018 APY29_RS14840 acb773c6fe88dbea0640f9538b041f68 290 Gene3D G3DSA:3.40.250.10 156 290 4.6E-23 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS14840 acb773c6fe88dbea0640f9538b041f68 290 SUPERFAMILY SSF52821 5 151 6.42E-39 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS14840 acb773c6fe88dbea0640f9538b041f68 290 SMART SM00450 11 141 5.5E-21 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS14840 acb773c6fe88dbea0640f9538b041f68 290 SMART SM00450 165 284 6.1E-11 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS14840 acb773c6fe88dbea0640f9538b041f68 290 SUPERFAMILY SSF52821 160 288 1.05E-29 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS14840 acb773c6fe88dbea0640f9538b041f68 290 Gene3D G3DSA:3.40.250.10 4 155 8.3E-30 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS14840 acb773c6fe88dbea0640f9538b041f68 290 Pfam PF00581 Rhodanese-like domain 15 137 1.3E-16 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS14840 acb773c6fe88dbea0640f9538b041f68 290 Pfam PF00581 Rhodanese-like domain 167 280 5.7E-8 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS20125 73e4d37ca48d51ef52df88906f82a018 314 Pfam PF12852 Cupin 17 193 6.9E-31 T 28-03-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain APY29_RS20125 73e4d37ca48d51ef52df88906f82a018 314 SMART SM00342 226 309 5.5E-28 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS20125 73e4d37ca48d51ef52df88906f82a018 314 Gene3D G3DSA:1.10.10.60 191 264 1.6E-11 T 28-03-2018 APY29_RS20125 73e4d37ca48d51ef52df88906f82a018 314 Gene3D G3DSA:2.60.120.280 51 190 8.2E-4 T 28-03-2018 APY29_RS20125 73e4d37ca48d51ef52df88906f82a018 314 Gene3D G3DSA:1.10.10.60 265 311 6.3E-14 T 28-03-2018 APY29_RS20125 73e4d37ca48d51ef52df88906f82a018 314 Pfam PF12833 Helix-turn-helix domain 232 309 1.6E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS20125 73e4d37ca48d51ef52df88906f82a018 314 SUPERFAMILY SSF46689 262 309 3.85E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS20125 73e4d37ca48d51ef52df88906f82a018 314 SUPERFAMILY SSF46689 209 260 6.54E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS18015 241e7995f8e11533448e8bd7eae4ffb6 61 Gene3D G3DSA:1.10.287.310 1 61 7.1E-20 T 28-03-2018 APY29_RS18015 241e7995f8e11533448e8bd7eae4ffb6 61 SUPERFAMILY SSF46561 1 59 1.7E-18 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18015 241e7995f8e11533448e8bd7eae4ffb6 61 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 15.164 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18015 241e7995f8e11533448e8bd7eae4ffb6 61 Pfam PF00831 Ribosomal L29 protein 4 57 4.6E-21 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18015 241e7995f8e11533448e8bd7eae4ffb6 61 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 55 1.6E-20 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS22865 801907fef8c00021ff21900a33a45db6 336 SUPERFAMILY SSF56784 125 315 5.4E-31 T 28-03-2018 IPR023214 HAD-like domain APY29_RS22865 801907fef8c00021ff21900a33a45db6 336 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 70 308 1.0E-42 T 28-03-2018 IPR005519 Acid phosphatase, class B-like APY29_RS22865 801907fef8c00021ff21900a33a45db6 336 Gene3D G3DSA:3.40.50.1000 87 276 4.6E-21 T 28-03-2018 IPR023214 HAD-like domain APY29_RS22865 801907fef8c00021ff21900a33a45db6 336 TIGRFAM TIGR01533 lipo_e_P4: 5'-nucleotidase, lipoprotein e(P4) family 65 332 9.8E-65 T 28-03-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 APY29_RS22865 801907fef8c00021ff21900a33a45db6 336 PIRSF PIRSF019271 33 336 1.0E-103 T 28-03-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 APY29_RS02465 bd2272bd883db0600e9cd58ee021cd23 270 Gene3D G3DSA:2.40.160.20 66 270 4.9E-7 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APY29_RS02465 bd2272bd883db0600e9cd58ee021cd23 270 SUPERFAMILY SSF56925 113 245 1.15E-8 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APY29_RS16025 67831f7d7dd8a794da1fa64555c6158e 946 SUPERFAMILY SSF52743 69 385 2.49E-58 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS16025 67831f7d7dd8a794da1fa64555c6158e 946 Gene3D G3DSA:2.40.128.130 636 946 4.6E-26 T 28-03-2018 APY29_RS16025 67831f7d7dd8a794da1fa64555c6158e 946 SUPERFAMILY SSF103515 645 946 3.14E-35 T 28-03-2018 IPR005546 Autotransporter beta-domain APY29_RS16025 67831f7d7dd8a794da1fa64555c6158e 946 SMART SM00869 680 936 6.3E-24 T 28-03-2018 IPR005546 Autotransporter beta-domain APY29_RS16025 67831f7d7dd8a794da1fa64555c6158e 946 Pfam PF12951 Passenger-associated-transport-repeat 415 444 1.6E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS16025 67831f7d7dd8a794da1fa64555c6158e 946 Pfam PF03797 Autotransporter beta-domain 684 926 3.0E-32 T 28-03-2018 IPR005546 Autotransporter beta-domain APY29_RS16025 67831f7d7dd8a794da1fa64555c6158e 946 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 92 103 - T 28-03-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site APY29_RS16025 67831f7d7dd8a794da1fa64555c6158e 946 PRINTS PR00723 Subtilisin serine protease family (S8) signature 128 141 4.1E-14 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS16025 67831f7d7dd8a794da1fa64555c6158e 946 PRINTS PR00723 Subtilisin serine protease family (S8) signature 324 340 4.1E-14 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS16025 67831f7d7dd8a794da1fa64555c6158e 946 PRINTS PR00723 Subtilisin serine protease family (S8) signature 87 106 4.1E-14 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS16025 67831f7d7dd8a794da1fa64555c6158e 946 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 325 335 - T 28-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site APY29_RS16025 67831f7d7dd8a794da1fa64555c6158e 946 Pfam PF00082 Subtilase family 87 375 1.3E-35 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS16025 67831f7d7dd8a794da1fa64555c6158e 946 Gene3D G3DSA:3.40.50.200 54 388 9.5E-61 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS16025 67831f7d7dd8a794da1fa64555c6158e 946 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 414 444 9.9E-12 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat APY29_RS02875 4be2b34bce43241acaabe42b02f5fbaf 435 Pfam PF07687 Peptidase dimerisation domain 226 323 2.4E-7 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain APY29_RS02875 4be2b34bce43241acaabe42b02f5fbaf 435 Gene3D G3DSA:3.40.630.10 14 279 2.9E-49 T 28-03-2018 APY29_RS02875 4be2b34bce43241acaabe42b02f5fbaf 435 Gene3D G3DSA:3.40.630.10 280 435 8.3E-23 T 28-03-2018 APY29_RS02875 4be2b34bce43241acaabe42b02f5fbaf 435 PIRSF PIRSF005962 26 435 1.7E-116 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 APY29_RS02875 4be2b34bce43241acaabe42b02f5fbaf 435 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 41 420 2.4E-101 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 APY29_RS02875 4be2b34bce43241acaabe42b02f5fbaf 435 SUPERFAMILY SSF55031 223 329 5.76E-27 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain APY29_RS02875 4be2b34bce43241acaabe42b02f5fbaf 435 SUPERFAMILY SSF53187 30 237 4.29E-79 T 28-03-2018 APY29_RS02875 4be2b34bce43241acaabe42b02f5fbaf 435 SUPERFAMILY SSF53187 341 433 4.29E-79 T 28-03-2018 APY29_RS02875 4be2b34bce43241acaabe42b02f5fbaf 435 Pfam PF01546 Peptidase family M20/M25/M40 98 426 8.7E-33 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APY29_RS00500 04d805714b05343e0fbfb257bd36519c 85 SUPERFAMILY SSF143120 1 74 2.62E-15 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM APY29_RS00500 04d805714b05343e0fbfb257bd36519c 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 56 3.9E-17 T 28-03-2018 APY29_RS00500 04d805714b05343e0fbfb257bd36519c 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 73 3.7E-15 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM APY29_RS00500 04d805714b05343e0fbfb257bd36519c 85 Gene3D G3DSA:3.40.1620.10 1 57 2.7E-12 T 28-03-2018 APY29_RS11215 4cd550e84686e8df2ddb2efe01c34111 645 Gene3D G3DSA:1.10.443.10 213 403 2.5E-19 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS11215 4cd550e84686e8df2ddb2efe01c34111 645 Gene3D G3DSA:1.10.150.130 89 212 3.3E-15 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal APY29_RS11215 4cd550e84686e8df2ddb2efe01c34111 645 Pfam PF00589 Phage integrase family 217 393 5.0E-16 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS11215 4cd550e84686e8df2ddb2efe01c34111 645 SUPERFAMILY SSF56349 101 403 3.53E-46 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APY29_RS11215 4cd550e84686e8df2ddb2efe01c34111 645 Pfam PF13356 Arm DNA-binding domain 8 89 1.9E-17 T 28-03-2018 IPR025166 Integrase, DNA-binding domain APY29_RS21965 eceafe4b43efefc20fa7e24246e31175 692 Gene3D G3DSA:1.20.1050.40 21 156 1.4E-39 T 28-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal APY29_RS21965 eceafe4b43efefc20fa7e24246e31175 692 SUPERFAMILY SSF55486 16 689 1.6E-181 T 28-03-2018 APY29_RS21965 eceafe4b43efefc20fa7e24246e31175 692 Pfam PF01432 Peptidase family M3 241 689 7.1E-135 T 28-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 APY29_RS21965 eceafe4b43efefc20fa7e24246e31175 692 Gene3D G3DSA:1.10.1370.10 157 427 3.4E-40 T 28-03-2018 APY29_RS21965 eceafe4b43efefc20fa7e24246e31175 692 Gene3D G3DSA:1.10.1370.10 469 692 1.3E-58 T 28-03-2018 APY29_RS21485 ab53d73627c4e5d6c59dea2c2d8033d9 342 Gene3D G3DSA:3.20.20.210 1 342 1.2E-87 T 28-03-2018 APY29_RS21485 ab53d73627c4e5d6c59dea2c2d8033d9 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 8.0E-37 T 28-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 APY29_RS21485 ab53d73627c4e5d6c59dea2c2d8033d9 342 SUPERFAMILY SSF51726 4 338 4.06E-66 T 28-03-2018 APY29_RS21485 ab53d73627c4e5d6c59dea2c2d8033d9 342 PIRSF PIRSF005632 1 342 2.5E-196 T 28-03-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit APY29_RS12305 b4480f8c0ed6d80a694e52c80dfd5b40 283 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 204 279 1.0E-26 T 28-03-2018 IPR014057 Addiction module antidote protein, HI1420 APY29_RS12305 b4480f8c0ed6d80a694e52c80dfd5b40 283 Gene3D G3DSA:3.40.50.450 1 145 1.6E-4 T 28-03-2018 APY29_RS12305 b4480f8c0ed6d80a694e52c80dfd5b40 283 SUPERFAMILY SSF47413 220 278 6.75E-5 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APY29_RS04480 adefb9aaaf814ac344e8c599443bc784 138 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.2E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS04480 adefb9aaaf814ac344e8c599443bc784 138 Gene3D G3DSA:3.30.1300.30 31 134 9.5E-5 T 28-03-2018 APY29_RS04480 adefb9aaaf814ac344e8c599443bc784 138 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS04480 adefb9aaaf814ac344e8c599443bc784 138 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 2.7E-5 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS22310 6827b627fe58755ea1a2fc7008520544 429 Pfam PF12867 DinB superfamily 24 154 4.5E-8 T 28-03-2018 IPR024775 DinB-like domain APY29_RS22310 6827b627fe58755ea1a2fc7008520544 429 Gene3D G3DSA:3.90.1580.10 178 429 5.2E-47 T 28-03-2018 APY29_RS22310 6827b627fe58755ea1a2fc7008520544 429 SUPERFAMILY SSF56436 187 428 5.02E-62 T 28-03-2018 IPR016187 C-type lectin fold APY29_RS22310 6827b627fe58755ea1a2fc7008520544 429 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 20 425 1.2E-166 T 28-03-2018 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 APY29_RS22310 6827b627fe58755ea1a2fc7008520544 429 Gene3D G3DSA:1.20.120.450 11 163 3.7E-7 T 28-03-2018 APY29_RS22310 6827b627fe58755ea1a2fc7008520544 429 Pfam PF03781 Sulfatase-modifying factor enzyme 1 207 341 1.3E-21 T 28-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 APY29_RS22310 6827b627fe58755ea1a2fc7008520544 429 Pfam PF03781 Sulfatase-modifying factor enzyme 1 346 426 8.8E-7 T 28-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 APY29_RS09880 58d3691afc84c5c0d9d48cc91b4bb327 327 Pfam PF01464 Transglycosylase SLT domain 201 298 2.2E-27 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 APY29_RS09880 58d3691afc84c5c0d9d48cc91b4bb327 327 Gene3D G3DSA:1.10.530.10 185 324 8.1E-45 T 28-03-2018 APY29_RS09880 58d3691afc84c5c0d9d48cc91b4bb327 327 SUPERFAMILY SSF53955 192 321 3.18E-45 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS09880 58d3691afc84c5c0d9d48cc91b4bb327 327 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 218 246 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 APY29_RS21070 9d39b7e86fe036f4cc6974d3f6065a35 209 TIGRFAM TIGR02560 HrpB4: type III secretion protein HrpB4 2 209 1.1E-78 T 28-03-2018 IPR013393 Type III secretion protein HrpB4 APY29_RS21070 9d39b7e86fe036f4cc6974d3f6065a35 209 Pfam PF09502 Bacterial type III secretion protein (HrpB4) 5 203 2.2E-39 T 28-03-2018 IPR013393 Type III secretion protein HrpB4 APY29_RS05615 af13df15e445b97a1d8ff7d5c6659f02 241 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 44 215 6.3E-54 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 APY29_RS05615 af13df15e445b97a1d8ff7d5c6659f02 241 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 17 238 1.3E-88 T 28-03-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 APY29_RS05615 af13df15e445b97a1d8ff7d5c6659f02 241 SUPERFAMILY SSF52402 16 204 4.79E-58 T 28-03-2018 APY29_RS05615 af13df15e445b97a1d8ff7d5c6659f02 241 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 8 239 41.249 T 28-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 APY29_RS05615 af13df15e445b97a1d8ff7d5c6659f02 241 Gene3D G3DSA:3.40.50.620 5 241 2.5E-44 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS05615 af13df15e445b97a1d8ff7d5c6659f02 241 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 29 239 5.1E-83 T 28-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 APY29_RS05615 af13df15e445b97a1d8ff7d5c6659f02 241 PIRSF PIRSF000857 4 241 7.3E-61 T 28-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 APY29_RS15970 9ad25edae572ef6e0f0f9e7fa92ac210 458 Pfam PF06723 MreB/Mbl protein 201 256 6.1E-7 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 APY29_RS15970 9ad25edae572ef6e0f0f9e7fa92ac210 458 SUPERFAMILY SSF53067 111 230 3.56E-19 T 28-03-2018 APY29_RS15970 9ad25edae572ef6e0f0f9e7fa92ac210 458 SUPERFAMILY SSF53067 2 42 3.56E-19 T 28-03-2018 APY29_RS15970 9ad25edae572ef6e0f0f9e7fa92ac210 458 Gene3D G3DSA:3.30.420.40 2 239 2.1E-27 T 28-03-2018 APY29_RS15970 9ad25edae572ef6e0f0f9e7fa92ac210 458 Gene3D G3DSA:3.30.420.40 240 433 1.5E-16 T 28-03-2018 APY29_RS15970 9ad25edae572ef6e0f0f9e7fa92ac210 458 SUPERFAMILY SSF53067 235 294 5.03E-22 T 28-03-2018 APY29_RS15970 9ad25edae572ef6e0f0f9e7fa92ac210 458 SUPERFAMILY SSF53067 332 450 5.03E-22 T 28-03-2018 APY29_RS21045 913636925d63032041ec4ec3fdd11610 607 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 584 603 2.8E-26 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 APY29_RS21045 913636925d63032041ec4ec3fdd11610 607 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 370 390 2.8E-26 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 APY29_RS21045 913636925d63032041ec4ec3fdd11610 607 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 495 510 2.8E-26 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 APY29_RS21045 913636925d63032041ec4ec3fdd11610 607 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 198 215 2.8E-26 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 APY29_RS21045 913636925d63032041ec4ec3fdd11610 607 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 461 480 2.8E-26 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 APY29_RS21045 913636925d63032041ec4ec3fdd11610 607 Pfam PF00263 Bacterial type II and III secretion system protein 448 605 2.4E-39 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 APY29_RS21045 913636925d63032041ec4ec3fdd11610 607 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 323 606 1.3E-106 T 28-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 APY29_RS21045 913636925d63032041ec4ec3fdd11610 607 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 551 584 - T 28-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 APY29_RS21045 913636925d63032041ec4ec3fdd11610 607 Pfam PF03958 Bacterial type II/III secretion system short domain 186 367 2.9E-17 T 28-03-2018 IPR005644 NolW-like APY29_RS18910 c467607ff3e31cf2b494323db5a0bf48 480 SMART SM00996 12 479 0.0 T 28-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 APY29_RS18910 c467607ff3e31cf2b494323db5a0bf48 480 SUPERFAMILY SSF52283 190 237 1.25E-113 T 28-03-2018 APY29_RS18910 c467607ff3e31cf2b494323db5a0bf48 480 SUPERFAMILY SSF52283 10 153 1.25E-113 T 28-03-2018 APY29_RS18910 c467607ff3e31cf2b494323db5a0bf48 480 SUPERFAMILY SSF52283 401 480 1.25E-113 T 28-03-2018 APY29_RS18910 c467607ff3e31cf2b494323db5a0bf48 480 SUPERFAMILY SSF51735 238 400 1.07E-79 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS18910 c467607ff3e31cf2b494323db5a0bf48 480 PIRSF PIRSF001109 1 480 2.3E-190 T 28-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 APY29_RS18910 c467607ff3e31cf2b494323db5a0bf48 480 Gene3D G3DSA:3.40.50.1480 2 256 9.5E-85 T 28-03-2018 APY29_RS18910 c467607ff3e31cf2b494323db5a0bf48 480 Gene3D G3DSA:3.40.50.1480 257 453 7.8E-83 T 28-03-2018 APY29_RS18910 c467607ff3e31cf2b494323db5a0bf48 480 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 13 472 9.3E-187 T 28-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 APY29_RS18910 c467607ff3e31cf2b494323db5a0bf48 480 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 8 472 48.14 T 28-03-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508 APY29_RS18910 c467607ff3e31cf2b494323db5a0bf48 480 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 84 98 - T 28-03-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 APY29_RS18910 c467607ff3e31cf2b494323db5a0bf48 480 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 12 479 2.4E-146 T 28-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 APY29_RS18910 c467607ff3e31cf2b494323db5a0bf48 480 SMART SM00997 238 400 1.7E-110 T 28-03-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 APY29_RS18910 c467607ff3e31cf2b494323db5a0bf48 480 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 238 400 4.7E-81 T 28-03-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 APY29_RS18910 c467607ff3e31cf2b494323db5a0bf48 480 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 260 277 - T 28-03-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 APY29_RS11815 786fba2d6fdc3082eabe5eb34217f38d 143 Gene3D G3DSA:3.10.50.40 31 143 2.3E-41 T 28-03-2018 APY29_RS11815 786fba2d6fdc3082eabe5eb34217f38d 143 SUPERFAMILY SSF54534 35 142 2.16E-37 T 28-03-2018 APY29_RS11815 786fba2d6fdc3082eabe5eb34217f38d 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 42 138 2.9E-34 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain APY29_RS04290 7ebc64810338c39e8d611d0de7ed1bba 214 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 35 195 9.5E-38 T 28-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component APY29_RS04290 7ebc64810338c39e8d611d0de7ed1bba 214 Gene3D G3DSA:3.40.50.10610 17 213 2.3E-43 T 28-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component APY29_RS04290 7ebc64810338c39e8d611d0de7ed1bba 214 SUPERFAMILY SSF159594 34 204 7.32E-44 T 28-03-2018 APY29_RS13005 b55e3effad408ca4bcbdcf4b11437ab7 74 Gene3D G3DSA:3.30.420.10 9 74 1.0E-6 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS13005 b55e3effad408ca4bcbdcf4b11437ab7 74 Pfam PF13683 Integrase core domain 30 73 8.6E-14 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 APY29_RS13005 b55e3effad408ca4bcbdcf4b11437ab7 74 SUPERFAMILY SSF53098 30 73 1.52E-6 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS00820 36408369d440ff12d43c0c6f2cef8ba8 727 SUPERFAMILY SSF51011 622 725 1.03E-33 T 28-03-2018 APY29_RS00820 36408369d440ff12d43c0c6f2cef8ba8 727 SUPERFAMILY SSF81296 18 111 4.48E-16 T 28-03-2018 IPR014756 Immunoglobulin E-set APY29_RS00820 36408369d440ff12d43c0c6f2cef8ba8 727 Pfam PF00128 Alpha amylase, catalytic domain 265 346 7.9E-9 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS00820 36408369d440ff12d43c0c6f2cef8ba8 727 PIRSF PIRSF000463 10 726 1.6E-288 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 APY29_RS00820 36408369d440ff12d43c0c6f2cef8ba8 727 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 123 206 1.5E-22 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 APY29_RS00820 36408369d440ff12d43c0c6f2cef8ba8 727 SMART SM00642 250 618 6.1E-7 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS00820 36408369d440ff12d43c0c6f2cef8ba8 727 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 627 724 5.2E-25 T 28-03-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 APY29_RS00820 36408369d440ff12d43c0c6f2cef8ba8 727 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 99 726 44.453 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 APY29_RS00820 36408369d440ff12d43c0c6f2cef8ba8 727 Gene3D G3DSA:2.60.40.10 111 242 4.2E-33 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS00820 36408369d440ff12d43c0c6f2cef8ba8 727 Gene3D G3DSA:2.60.40.10 5 104 8.6E-12 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS00820 36408369d440ff12d43c0c6f2cef8ba8 727 Gene3D G3DSA:2.60.40.1180 635 726 9.2E-35 T 28-03-2018 APY29_RS00820 36408369d440ff12d43c0c6f2cef8ba8 727 Gene3D G3DSA:3.20.20.80 243 634 6.8E-79 T 28-03-2018 APY29_RS00820 36408369d440ff12d43c0c6f2cef8ba8 727 SUPERFAMILY SSF51445 168 615 1.68E-112 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS00820 36408369d440ff12d43c0c6f2cef8ba8 727 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 107 723 9.4E-276 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 APY29_RS17620 06c21d55af4ecd1d2b8d9c79026be3c9 422 SUPERFAMILY SSF55874 250 418 9.04E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS17620 06c21d55af4ecd1d2b8d9c79026be3c9 422 SUPERFAMILY SSF47384 180 254 2.94E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS17620 06c21d55af4ecd1d2b8d9c79026be3c9 422 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 3 123 5.3E-11 T 28-03-2018 IPR000014 PAS domain APY29_RS17620 06c21d55af4ecd1d2b8d9c79026be3c9 422 SUPERFAMILY SSF55785 3 115 2.97E-14 T 28-03-2018 IPR000014 PAS domain APY29_RS17620 06c21d55af4ecd1d2b8d9c79026be3c9 422 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 302 417 6.0E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS17620 06c21d55af4ecd1d2b8d9c79026be3c9 422 Gene3D G3DSA:3.30.450.20 1 135 2.0E-20 T 28-03-2018 APY29_RS17620 06c21d55af4ecd1d2b8d9c79026be3c9 422 Pfam PF08448 PAS fold 12 119 3.4E-17 T 28-03-2018 IPR013656 PAS fold-4 APY29_RS17620 06c21d55af4ecd1d2b8d9c79026be3c9 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 349 363 4.1E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS17620 06c21d55af4ecd1d2b8d9c79026be3c9 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 398 4.1E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS17620 06c21d55af4ecd1d2b8d9c79026be3c9 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 377 4.1E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS17620 06c21d55af4ecd1d2b8d9c79026be3c9 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 417 4.1E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS17620 06c21d55af4ecd1d2b8d9c79026be3c9 422 SMART SM00091 3 70 6.0E-4 T 28-03-2018 IPR000014 PAS domain APY29_RS17620 06c21d55af4ecd1d2b8d9c79026be3c9 422 SMART SM00387 299 420 1.4E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS17620 06c21d55af4ecd1d2b8d9c79026be3c9 422 Gene3D G3DSA:1.10.287.130 173 254 2.7E-4 T 28-03-2018 APY29_RS17620 06c21d55af4ecd1d2b8d9c79026be3c9 422 Gene3D G3DSA:3.30.565.10 257 420 3.2E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS19880 dcbc428324b071368a9b1b2d45a17ce1 304 Gene3D G3DSA:3.40.190.10 1 104 5.5E-43 T 28-03-2018 APY29_RS19880 dcbc428324b071368a9b1b2d45a17ce1 304 SUPERFAMILY SSF53850 2 216 3.8E-82 T 28-03-2018 APY29_RS19880 dcbc428324b071368a9b1b2d45a17ce1 304 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 210 4.6E-76 T 28-03-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APY29_RS19880 dcbc428324b071368a9b1b2d45a17ce1 304 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 224 293 9.2E-14 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APY29_RS19880 dcbc428324b071368a9b1b2d45a17ce1 304 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 294 1.0E-102 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APY29_RS19880 dcbc428324b071368a9b1b2d45a17ce1 304 PIRSF PIRSF001438 1 304 2.1E-113 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APY29_RS19880 dcbc428324b071368a9b1b2d45a17ce1 304 Gene3D G3DSA:3.30.160.40 220 302 3.8E-21 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APY29_RS19880 dcbc428324b071368a9b1b2d45a17ce1 304 Gene3D G3DSA:3.40.190.10 105 197 2.1E-36 T 28-03-2018 APY29_RS19880 dcbc428324b071368a9b1b2d45a17ce1 304 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 1.3E-42 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APY29_RS19880 dcbc428324b071368a9b1b2d45a17ce1 304 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 1.3E-42 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APY29_RS19880 dcbc428324b071368a9b1b2d45a17ce1 304 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 1.3E-42 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APY29_RS19880 dcbc428324b071368a9b1b2d45a17ce1 304 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 1.3E-42 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APY29_RS19880 dcbc428324b071368a9b1b2d45a17ce1 304 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 1.3E-42 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APY29_RS19880 dcbc428324b071368a9b1b2d45a17ce1 304 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 28-03-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APY29_RS19880 dcbc428324b071368a9b1b2d45a17ce1 304 SUPERFAMILY SSF54782 221 303 9.55E-23 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APY29_RS19880 dcbc428324b071368a9b1b2d45a17ce1 304 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 37.683 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APY29_RS11890 53b8cadb8eb26b0003e43b4773ec3acf 112 Pfam PF12375 Phage protein 15 55 4.8E-6 T 28-03-2018 IPR021077 Bacteriophage phi-Lf, Orf112 APY29_RS06420 00fc80f2cdd5976e436d6ee4ceb4b688 722 SMART SM00304 214 266 2.6E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS06420 00fc80f2cdd5976e436d6ee4ceb4b688 722 SMART SM00304 395 447 11.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS06420 00fc80f2cdd5976e436d6ee4ceb4b688 722 SUPERFAMILY SSF58104 415 701 6.02E-72 T 28-03-2018 APY29_RS06420 00fc80f2cdd5976e436d6ee4ceb4b688 722 Pfam PF00672 HAMP domain 214 262 3.6E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS06420 00fc80f2cdd5976e436d6ee4ceb4b688 722 SMART SM00283 448 695 7.1E-92 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS06420 00fc80f2cdd5976e436d6ee4ceb4b688 722 SUPERFAMILY SSF158472 214 265 1.44E-9 T 28-03-2018 APY29_RS06420 00fc80f2cdd5976e436d6ee4ceb4b688 722 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 508 662 3.2E-53 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS06420 00fc80f2cdd5976e436d6ee4ceb4b688 722 Pfam PF12729 Four helix bundle sensory module for signal transduction 8 185 2.1E-12 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain APY29_RS06420 00fc80f2cdd5976e436d6ee4ceb4b688 722 Gene3D G3DSA:1.10.287.950 80 503 9.3E-17 T 28-03-2018 APY29_RS06420 00fc80f2cdd5976e436d6ee4ceb4b688 722 Gene3D G3DSA:1.10.287.950 504 699 5.3E-49 T 28-03-2018 APY29_RS06420 00fc80f2cdd5976e436d6ee4ceb4b688 722 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 623 652 1.3E-28 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS06420 00fc80f2cdd5976e436d6ee4ceb4b688 722 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 575 604 1.3E-28 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS06420 00fc80f2cdd5976e436d6ee4ceb4b688 722 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 462 491 1.3E-28 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS16820 5d6edf04321c1ee0bbc1f81eaf637a04 388 Gene3D G3DSA:3.30.530.20 25 183 9.5E-9 T 28-03-2018 IPR023393 START-like domain APY29_RS16820 5d6edf04321c1ee0bbc1f81eaf637a04 388 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 30 178 4.8E-6 T 28-03-2018 IPR019587 Polyketide cyclase/dehydrase APY29_RS16820 5d6edf04321c1ee0bbc1f81eaf637a04 388 SUPERFAMILY SSF55961 26 181 1.9E-8 T 28-03-2018 APY29_RS16820 5d6edf04321c1ee0bbc1f81eaf637a04 388 Gene3D G3DSA:3.20.80.10 196 388 6.9E-20 T 28-03-2018 IPR011256 Regulatory factor, effector binding domain APY29_RS19815 2d06f75ed577aae208c7f58d1b1abb23 226 Gene3D G3DSA:3.30.450.40 45 226 1.1E-11 T 28-03-2018 IPR029016 GAF domain-like APY29_RS19815 2d06f75ed577aae208c7f58d1b1abb23 226 Pfam PF04340 Protein of unknown function, DUF484 7 225 9.9E-65 T 28-03-2018 IPR007435 Protein of unknown function DUF484 APY29_RS22200 bd55f61778f7841bc07c8a4d6fb60b80 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 28-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 APY29_RS22200 bd55f61778f7841bc07c8a4d6fb60b80 112 Gene3D G3DSA:3.30.70.120 1 109 1.9E-50 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APY29_RS22200 bd55f61778f7841bc07c8a4d6fb60b80 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 8.1E-43 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APY29_RS22200 bd55f61778f7841bc07c8a4d6fb60b80 112 PRINTS PR00340 P-II protein signature 83 103 5.6E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APY29_RS22200 bd55f61778f7841bc07c8a4d6fb60b80 112 PRINTS PR00340 P-II protein signature 2 17 5.6E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APY29_RS22200 bd55f61778f7841bc07c8a4d6fb60b80 112 PRINTS PR00340 P-II protein signature 23 41 5.6E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APY29_RS22200 bd55f61778f7841bc07c8a4d6fb60b80 112 PRINTS PR00340 P-II protein signature 52 75 5.6E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APY29_RS22200 bd55f61778f7841bc07c8a4d6fb60b80 112 SUPERFAMILY SSF54913 1 112 4.45E-46 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta APY29_RS22200 bd55f61778f7841bc07c8a4d6fb60b80 112 PIRSF PIRSF039144 1 112 1.3E-53 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APY29_RS22200 bd55f61778f7841bc07c8a4d6fb60b80 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 28-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 APY29_RS22200 bd55f61778f7841bc07c8a4d6fb60b80 112 SMART SM00938 4 105 2.8E-67 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APY29_RS17665 d3fd784a66f712a438fb4ce83428171c 548 SUPERFAMILY SSF48452 338 428 1.52E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS17665 d3fd784a66f712a438fb4ce83428171c 548 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 1 538 37.488 T 28-03-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 APY29_RS17665 d3fd784a66f712a438fb4ce83428171c 548 Gene3D G3DSA:1.25.40.10 182 514 4.8E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS17665 d3fd784a66f712a438fb4ce83428171c 548 Gene3D G3DSA:3.30.2010.10 59 144 2.3E-16 T 28-03-2018 APY29_RS17665 d3fd784a66f712a438fb4ce83428171c 548 Pfam PF01435 Peptidase family M48 66 260 1.7E-38 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 APY29_RS16030 a1e9631583034aa028990893fa41ecf8 391 Pfam PF00108 Thiolase, N-terminal domain 4 260 3.0E-87 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 APY29_RS16030 a1e9631583034aa028990893fa41ecf8 391 SUPERFAMILY SSF53901 3 267 3.12E-78 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS16030 a1e9631583034aa028990893fa41ecf8 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 2.4E-44 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 APY29_RS16030 a1e9631583034aa028990893fa41ecf8 391 Gene3D G3DSA:3.40.47.10 266 388 4.1E-32 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS16030 a1e9631583034aa028990893fa41ecf8 391 PIRSF PIRSF000429 1 391 1.1E-114 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 APY29_RS16030 a1e9631583034aa028990893fa41ecf8 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 APY29_RS16030 a1e9631583034aa028990893fa41ecf8 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 1.1E-126 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 APY29_RS16030 a1e9631583034aa028990893fa41ecf8 391 SUPERFAMILY SSF53901 269 390 1.25E-41 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS16030 a1e9631583034aa028990893fa41ecf8 391 Gene3D G3DSA:3.40.47.10 147 265 1.8E-21 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS16030 a1e9631583034aa028990893fa41ecf8 391 Gene3D G3DSA:3.40.47.10 1 144 1.3E-31 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS16030 a1e9631583034aa028990893fa41ecf8 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 APY29_RS18905 8d44bce8f31ba0dbf93346ccfb7bca68 844 SUPERFAMILY SSF53474 574 832 3.54E-45 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS18905 8d44bce8f31ba0dbf93346ccfb7bca68 844 Gene3D G3DSA:3.40.50.1820 570 843 2.7E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS18905 8d44bce8f31ba0dbf93346ccfb7bca68 844 Pfam PF00326 Prolyl oligopeptidase family 675 833 2.2E-24 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APY29_RS18905 8d44bce8f31ba0dbf93346ccfb7bca68 844 Gene3D G3DSA:2.140.10.30 11 245 2.9E-14 T 28-03-2018 APY29_RS18905 8d44bce8f31ba0dbf93346ccfb7bca68 844 Gene3D G3DSA:2.140.10.30 249 558 2.0E-8 T 28-03-2018 APY29_RS18905 8d44bce8f31ba0dbf93346ccfb7bca68 844 SUPERFAMILY SSF82171 252 552 1.44E-21 T 28-03-2018 APY29_RS18905 8d44bce8f31ba0dbf93346ccfb7bca68 844 SUPERFAMILY SSF82171 116 212 1.44E-21 T 28-03-2018 APY29_RS07940 c0abbac72d14c6d95204a5fd0211d64c 156 Gene3D G3DSA:2.60.120.10 31 156 7.8E-29 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS07940 c0abbac72d14c6d95204a5fd0211d64c 156 SUPERFAMILY SSF51182 35 154 1.22E-30 T 28-03-2018 IPR011051 RmlC-like cupin domain APY29_RS07940 c0abbac72d14c6d95204a5fd0211d64c 156 Pfam PF07883 Cupin domain 65 128 4.8E-12 T 28-03-2018 IPR013096 Cupin 2, conserved barrel APY29_RS20275 a4b5905d6274af3597d3e099c8fbecfe 264 Pfam PF04954 Siderophore-interacting protein 140 257 3.3E-35 T 28-03-2018 IPR007037 Siderophore-interacting protein APY29_RS20275 a4b5905d6274af3597d3e099c8fbecfe 264 SUPERFAMILY SSF63380 5 137 4.84E-17 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APY29_RS20275 a4b5905d6274af3597d3e099c8fbecfe 264 Gene3D G3DSA:3.40.50.80 133 264 6.4E-39 T 28-03-2018 APY29_RS20275 a4b5905d6274af3597d3e099c8fbecfe 264 Pfam PF08021 Siderophore-interacting FAD-binding domain 19 132 7.0E-38 T 28-03-2018 IPR013113 FAD-binding 9, siderophore-interacting APY29_RS20275 a4b5905d6274af3597d3e099c8fbecfe 264 Gene3D G3DSA:2.40.30.10 8 132 6.8E-34 T 28-03-2018 APY29_RS09840 67d7873d160f2fb823eb871292364241 292 Gene3D G3DSA:3.30.465.10 199 284 6.5E-26 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APY29_RS09840 67d7873d160f2fb823eb871292364241 292 Pfam PF00571 CBS domain 69 124 2.8E-5 T 28-03-2018 IPR000644 CBS domain APY29_RS09840 67d7873d160f2fb823eb871292364241 292 Pfam PF00571 CBS domain 137 189 5.0E-5 T 28-03-2018 IPR000644 CBS domain APY29_RS09840 67d7873d160f2fb823eb871292364241 292 SUPERFAMILY SSF54631 65 201 7.33E-31 T 28-03-2018 APY29_RS09840 67d7873d160f2fb823eb871292364241 292 SMART SM01091 207 285 1.6E-28 T 28-03-2018 IPR005170 Transporter-associated domain APY29_RS09840 67d7873d160f2fb823eb871292364241 292 SUPERFAMILY SSF56176 206 290 3.54E-24 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APY29_RS09840 67d7873d160f2fb823eb871292364241 292 Pfam PF03471 Transporter associated domain 209 283 3.8E-22 T 28-03-2018 IPR005170 Transporter-associated domain APY29_RS09840 67d7873d160f2fb823eb871292364241 292 Gene3D G3DSA:3.10.580.10 50 198 2.1E-33 T 28-03-2018 APY29_RS09840 67d7873d160f2fb823eb871292364241 292 SMART SM00116 141 189 1.9 T 28-03-2018 IPR000644 CBS domain APY29_RS09840 67d7873d160f2fb823eb871292364241 292 SMART SM00116 78 127 3.5 T 28-03-2018 IPR000644 CBS domain APY29_RS16890 13f59c2ddd24cf9c6374c029de323f40 672 Gene3D G3DSA:1.10.1370.10 46 650 1.4E-65 T 28-03-2018 APY29_RS16890 13f59c2ddd24cf9c6374c029de323f40 672 SUPERFAMILY SSF55486 40 312 1.07E-187 T 28-03-2018 APY29_RS16890 13f59c2ddd24cf9c6374c029de323f40 672 SUPERFAMILY SSF55486 343 655 1.07E-187 T 28-03-2018 APY29_RS16890 13f59c2ddd24cf9c6374c029de323f40 672 Pfam PF01401 Angiotensin-converting enzyme 40 654 1.8E-190 T 28-03-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 APY29_RS15240 495d76cb0139434bcc31f5332671264e 815 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 754 764 - T 28-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site APY29_RS15240 495d76cb0139434bcc31f5332671264e 815 Gene3D G3DSA:3.40.50.200 470 815 9.5E-67 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS15240 495d76cb0139434bcc31f5332671264e 815 SUPERFAMILY SSF52743 468 812 1.13E-58 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS15240 495d76cb0139434bcc31f5332671264e 815 Gene3D G3DSA:3.40.50.1820 49 318 2.7E-11 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS15240 495d76cb0139434bcc31f5332671264e 815 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 544 554 - T 28-03-2018 IPR022398 Peptidase S8, subtilisin, His-active site APY29_RS15240 495d76cb0139434bcc31f5332671264e 815 SUPERFAMILY SSF53474 199 324 2.98E-9 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS15240 495d76cb0139434bcc31f5332671264e 815 PRINTS PR00723 Subtilisin serine protease family (S8) signature 753 769 3.6E-15 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS15240 495d76cb0139434bcc31f5332671264e 815 PRINTS PR00723 Subtilisin serine protease family (S8) signature 485 504 3.6E-15 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS15240 495d76cb0139434bcc31f5332671264e 815 PRINTS PR00723 Subtilisin serine protease family (S8) signature 540 553 3.6E-15 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS15240 495d76cb0139434bcc31f5332671264e 815 Pfam PF00082 Subtilase family 491 799 1.3E-43 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS16680 becc789c275ecb2da2ee1fcb10c67d23 172 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 163 16.281 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 APY29_RS16680 becc789c275ecb2da2ee1fcb10c67d23 172 Pfam PF01252 Signal peptidase (SPase) II 17 157 1.1E-35 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 APY29_RS16680 becc789c275ecb2da2ee1fcb10c67d23 172 TIGRFAM TIGR00077 lspA: signal peptidase II 10 165 1.6E-41 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 APY29_RS16680 becc789c275ecb2da2ee1fcb10c67d23 172 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 102 117 6.3E-16 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 APY29_RS16680 becc789c275ecb2da2ee1fcb10c67d23 172 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 6.3E-16 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 APY29_RS16680 becc789c275ecb2da2ee1fcb10c67d23 172 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 138 154 6.3E-16 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 APY29_RS16680 becc789c275ecb2da2ee1fcb10c67d23 172 ProSitePatterns PS00855 Signal peptidases II signature. 105 117 - T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 APY29_RS06705 5e12ca57c43cd1deb71b55361ee4b80b 275 Gene3D G3DSA:1.20.1540.10 74 255 1.5E-15 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APY29_RS06705 5e12ca57c43cd1deb71b55361ee4b80b 275 Pfam PF01694 Rhomboid family 114 256 6.5E-17 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APY29_RS06705 5e12ca57c43cd1deb71b55361ee4b80b 275 SUPERFAMILY SSF144091 83 255 1.83E-17 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APY29_RS02880 4380391e67d051fa021996f88bf714a7 271 Gene3D G3DSA:3.30.1130.10 15 127 2.1E-38 T 28-03-2018 APY29_RS02880 4380391e67d051fa021996f88bf714a7 271 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 15 123 9.8E-45 T 28-03-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 APY29_RS02880 4380391e67d051fa021996f88bf714a7 271 TIGRFAM TIGR03138 QueF: queuine synthase 4 271 5.2E-113 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 APY29_RS02880 4380391e67d051fa021996f88bf714a7 271 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 271 135.094 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 APY29_RS02880 4380391e67d051fa021996f88bf714a7 271 PIRSF PIRSF004750 1 271 3.6E-111 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 APY29_RS02880 4380391e67d051fa021996f88bf714a7 271 Pfam PF14489 QueF-like protein 183 257 2.7E-27 T 28-03-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 APY29_RS02880 4380391e67d051fa021996f88bf714a7 271 SUPERFAMILY SSF55620 173 253 2.3E-9 T 28-03-2018 APY29_RS02880 4380391e67d051fa021996f88bf714a7 271 Gene3D G3DSA:3.30.1130.10 132 271 3.9E-37 T 28-03-2018 APY29_RS22160 48a95ef8b60c6a5cefcb01aaaa9e7d56 431 SUPERFAMILY SSF53901 288 431 6.37E-31 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS22160 48a95ef8b60c6a5cefcb01aaaa9e7d56 431 Gene3D G3DSA:3.40.47.10 6 282 4.1E-39 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS22160 48a95ef8b60c6a5cefcb01aaaa9e7d56 431 SUPERFAMILY SSF53901 12 288 1.46E-54 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS22160 48a95ef8b60c6a5cefcb01aaaa9e7d56 431 PIRSF PIRSF000429 6 431 6.9E-104 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 APY29_RS22160 48a95ef8b60c6a5cefcb01aaaa9e7d56 431 Pfam PF00108 Thiolase, N-terminal domain 12 281 2.4E-53 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 APY29_RS22160 48a95ef8b60c6a5cefcb01aaaa9e7d56 431 Pfam PF02803 Thiolase, C-terminal domain 290 431 9.5E-32 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 APY29_RS22160 48a95ef8b60c6a5cefcb01aaaa9e7d56 431 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 14 430 5.4E-114 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 APY29_RS22160 48a95ef8b60c6a5cefcb01aaaa9e7d56 431 Gene3D G3DSA:3.40.47.10 283 429 2.7E-26 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS11180 e287e82a88f81f0184ee6aa254af84f3 154 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 144 1.2E-35 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily APY29_RS11180 e287e82a88f81f0184ee6aa254af84f3 154 Gene3D G3DSA:3.40.50.2300 1 154 3.0E-46 T 28-03-2018 APY29_RS11180 e287e82a88f81f0184ee6aa254af84f3 154 SMART SM00226 1 150 5.8E-46 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily APY29_RS11180 e287e82a88f81f0184ee6aa254af84f3 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 2.3E-23 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APY29_RS11180 e287e82a88f81f0184ee6aa254af84f3 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 80 95 2.3E-23 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APY29_RS11180 e287e82a88f81f0184ee6aa254af84f3 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 122 137 2.3E-23 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APY29_RS11180 e287e82a88f81f0184ee6aa254af84f3 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 46 62 2.3E-23 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APY29_RS11180 e287e82a88f81f0184ee6aa254af84f3 154 SUPERFAMILY SSF52788 1 150 5.76E-46 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily APY29_RS08100 3704c81d7af525b30bccb3daee6bc3db 315 SUPERFAMILY SSF103481 195 290 2.22E-9 T 28-03-2018 APY29_RS08100 3704c81d7af525b30bccb3daee6bc3db 315 Pfam PF00892 EamA-like transporter family 148 289 2.0E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 APY29_RS08100 3704c81d7af525b30bccb3daee6bc3db 315 Pfam PF00892 EamA-like transporter family 16 138 1.7E-10 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 APY29_RS08100 3704c81d7af525b30bccb3daee6bc3db 315 SUPERFAMILY SSF103481 40 139 6.15E-7 T 28-03-2018 APY29_RS05300 880956d77292e1a4ea203564d75d950d 126 SUPERFAMILY SSF55298 2 125 2.04E-45 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APY29_RS05300 880956d77292e1a4ea203564d75d950d 126 Gene3D G3DSA:3.30.1330.40 1 126 1.8E-46 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APY29_RS05300 880956d77292e1a4ea203564d75d950d 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 1.1E-49 T 28-03-2018 IPR006056 RidA family APY29_RS05300 880956d77292e1a4ea203564d75d950d 126 Pfam PF01042 Endoribonuclease L-PSP 8 124 8.2E-41 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family APY29_RS10280 45cedff37f50cdbb2a5f22632346063b 469 PIRSF PIRSF018788 2 461 3.5E-240 T 28-03-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 APY29_RS10280 45cedff37f50cdbb2a5f22632346063b 469 Gene3D G3DSA:3.20.20.70 144 450 6.1E-162 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS10280 45cedff37f50cdbb2a5f22632346063b 469 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 13 440 1.0E-220 T 28-03-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 APY29_RS10280 45cedff37f50cdbb2a5f22632346063b 469 Gene3D G3DSA:1.10.220.70 57 141 3.4E-40 T 28-03-2018 APY29_RS10280 45cedff37f50cdbb2a5f22632346063b 469 Gene3D G3DSA:2.30.170.30 3 54 1.3E-21 T 28-03-2018 APY29_RS13420 e9465658fb2689c9dde77bdd617c6059 472 Gene3D G3DSA:3.30.43.10 2 92 8.4E-25 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APY29_RS13420 e9465658fb2689c9dde77bdd617c6059 472 Gene3D G3DSA:1.10.45.10 420 459 5.8E-13 T 28-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 APY29_RS13420 e9465658fb2689c9dde77bdd617c6059 472 Pfam PF02913 FAD linked oxidases, C-terminal domain 218 459 8.7E-56 T 28-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 APY29_RS13420 e9465658fb2689c9dde77bdd617c6059 472 Gene3D G3DSA:3.30.465.10 93 239 1.7E-37 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APY29_RS13420 e9465658fb2689c9dde77bdd617c6059 472 SUPERFAMILY SSF56176 8 216 2.04E-66 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APY29_RS13420 e9465658fb2689c9dde77bdd617c6059 472 SUPERFAMILY SSF55103 189 462 7.19E-57 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 APY29_RS13420 e9465658fb2689c9dde77bdd617c6059 472 Pfam PF01565 FAD binding domain 40 178 1.4E-38 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APY29_RS02525 2a6ea1a46e05706f5f60b3d1905041da 424 Gene3D G3DSA:3.40.50.10300 206 424 4.4E-63 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 APY29_RS02525 2a6ea1a46e05706f5f60b3d1905041da 424 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 212 392 8.6E-68 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 APY29_RS02525 2a6ea1a46e05706f5f60b3d1905041da 424 Gene3D G3DSA:3.40.50.1950 5 193 8.8E-54 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 APY29_RS02525 2a6ea1a46e05706f5f60b3d1905041da 424 SUPERFAMILY SSF52507 10 183 2.22E-58 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 APY29_RS02525 2a6ea1a46e05706f5f60b3d1905041da 424 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 11 418 1.5E-130 T 28-03-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 APY29_RS02525 2a6ea1a46e05706f5f60b3d1905041da 424 SUPERFAMILY SSF102645 211 423 3.66E-72 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 APY29_RS02525 2a6ea1a46e05706f5f60b3d1905041da 424 Pfam PF02441 Flavoprotein 14 182 3.6E-43 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 APY29_RS06785 3f845e41ced4199dd055518bc0ce6525 111 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 5 109 24.843 T 28-03-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 APY29_RS06785 3f845e41ced4199dd055518bc0ce6525 111 SUPERFAMILY SSF103481 11 109 1.44E-6 T 28-03-2018 APY29_RS06785 3f845e41ced4199dd055518bc0ce6525 111 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 7 109 1.2E-40 T 28-03-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 APY29_RS20665 e33e886f480444038d87f4e6cb6be04a 130 Gene3D G3DSA:3.30.230.10 3 130 6.8E-52 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APY29_RS20665 e33e886f480444038d87f4e6cb6be04a 130 SUPERFAMILY SSF54211 6 130 2.12E-47 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APY29_RS20665 e33e886f480444038d87f4e6cb6be04a 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 28-03-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 APY29_RS20665 e33e886f480444038d87f4e6cb6be04a 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 32.236 T 28-03-2018 IPR023035 Ribosomal protein S9, bacterial/plastid APY29_RS20665 e33e886f480444038d87f4e6cb6be04a 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 7.0E-46 T 28-03-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 APY29_RS12605 89404d90199917cfdd3efdabd877fee3 378 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 357 36.851 T 28-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 APY29_RS12605 89404d90199917cfdd3efdabd877fee3 378 Pfam PF03054 tRNA methyl transferase 5 356 1.3E-126 T 28-03-2018 APY29_RS12605 89404d90199917cfdd3efdabd877fee3 378 Gene3D G3DSA:2.30.30.280 209 275 4.9E-21 T 28-03-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 APY29_RS12605 89404d90199917cfdd3efdabd877fee3 378 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 5 356 1.8E-126 T 28-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 APY29_RS12605 89404d90199917cfdd3efdabd877fee3 378 Gene3D G3DSA:2.40.30.10 278 367 1.7E-28 T 28-03-2018 APY29_RS12605 89404d90199917cfdd3efdabd877fee3 378 SUPERFAMILY SSF52402 2 291 3.09E-50 T 28-03-2018 APY29_RS12605 89404d90199917cfdd3efdabd877fee3 378 Gene3D G3DSA:3.40.50.620 1 208 4.2E-61 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS09760 482023bb94b8dc2ff6a9492a76dc7744 438 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 306 321 9.0E-5 T 28-03-2018 APY29_RS09760 482023bb94b8dc2ff6a9492a76dc7744 438 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 43 65 9.0E-5 T 28-03-2018 APY29_RS09760 482023bb94b8dc2ff6a9492a76dc7744 438 Pfam PF01266 FAD dependent oxidoreductase 43 393 1.8E-49 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APY29_RS09760 482023bb94b8dc2ff6a9492a76dc7744 438 Gene3D G3DSA:3.50.50.60 30 424 1.9E-32 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS09760 482023bb94b8dc2ff6a9492a76dc7744 438 SUPERFAMILY SSF51905 357 431 1.62E-39 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS09760 482023bb94b8dc2ff6a9492a76dc7744 438 SUPERFAMILY SSF51905 41 265 1.62E-39 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS22060 755b95eda1e3169b6eb39d14333aae7a 106 Pfam PF13698 Domain of unknown function (DUF4156) 22 103 1.7E-10 T 28-03-2018 IPR025294 Protein of unknown function DUF4156 APY29_RS04365 f03d5e94becce098136cd1c3be9e4a57 141 SUPERFAMILY SSF102400 1 140 5.1E-36 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 APY29_RS04365 f03d5e94becce098136cd1c3be9e4a57 141 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 137 5.2E-33 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 APY29_RS04365 f03d5e94becce098136cd1c3be9e4a57 141 Gene3D G3DSA:3.40.50.10110 1 141 3.2E-39 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 APY29_RS18785 065fdacc8410bd4beaa59e442e8a3887 277 SUPERFAMILY SSF52540 5 241 1.58E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS18785 065fdacc8410bd4beaa59e442e8a3887 277 Gene3D G3DSA:3.40.50.300 1 256 3.6E-59 T 28-03-2018 APY29_RS18785 065fdacc8410bd4beaa59e442e8a3887 277 Pfam PF00005 ABC transporter 26 167 2.6E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS18785 065fdacc8410bd4beaa59e442e8a3887 277 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS18785 065fdacc8410bd4beaa59e442e8a3887 277 SMART SM00382 34 215 5.4E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS04580 dc54e75267b4eab5ee6157fa00a3bb3a 392 Gene3D G3DSA:3.20.140.10 1 392 1.4E-103 T 28-03-2018 APY29_RS04580 dc54e75267b4eab5ee6157fa00a3bb3a 392 SUPERFAMILY SSF54675 1 136 1.18E-43 T 28-03-2018 APY29_RS04580 dc54e75267b4eab5ee6157fa00a3bb3a 392 PIRSF PIRSF000484 1 371 1.4E-68 T 28-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 APY29_RS04580 dc54e75267b4eab5ee6157fa00a3bb3a 392 SUPERFAMILY SSF51690 118 386 1.2E-88 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 APY29_RS04580 dc54e75267b4eab5ee6157fa00a3bb3a 392 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 388 47.049 T 28-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 APY29_RS04580 dc54e75267b4eab5ee6157fa00a3bb3a 392 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 161 386 2.3E-77 T 28-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 APY29_RS04580 dc54e75267b4eab5ee6157fa00a3bb3a 392 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 2 386 1.9E-139 T 28-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 APY29_RS20240 fa458253355f838bf35ab6cd4a9eb21f 289 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 26 284 9.0E-79 T 28-03-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 APY29_RS20240 fa458253355f838bf35ab6cd4a9eb21f 289 TIGRFAM TIGR03132 malonate_mdcB: triphosphoribosyl-dephospho-CoA synthase MdcB 21 286 2.1E-108 T 28-03-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 APY29_RS20240 fa458253355f838bf35ab6cd4a9eb21f 289 Hamap MF_01883 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [mdcB]. 1 289 118.43 T 28-03-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 APY29_RS20240 fa458253355f838bf35ab6cd4a9eb21f 289 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 289 116.319 T 28-03-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 APY29_RS19065 756a4112cb9a91e5f359f7f5e23d98fe 495 Gene3D G3DSA:3.40.1390.10 3 99 2.1E-18 T 28-03-2018 APY29_RS19065 756a4112cb9a91e5f359f7f5e23d98fe 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 19 485 7.9E-152 T 28-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 APY29_RS19065 756a4112cb9a91e5f359f7f5e23d98fe 495 Pfam PF01225 Mur ligase family, catalytic domain 22 96 6.1E-10 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 APY29_RS19065 756a4112cb9a91e5f359f7f5e23d98fe 495 Gene3D G3DSA:3.40.1190.10 100 334 7.4E-56 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 APY29_RS19065 756a4112cb9a91e5f359f7f5e23d98fe 495 Pfam PF08245 Mur ligase middle domain 109 311 6.1E-49 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 APY29_RS19065 756a4112cb9a91e5f359f7f5e23d98fe 495 SUPERFAMILY SSF63418 9 100 4.58E-19 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 APY29_RS19065 756a4112cb9a91e5f359f7f5e23d98fe 495 SUPERFAMILY SSF53244 332 487 2.35E-46 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 APY29_RS19065 756a4112cb9a91e5f359f7f5e23d98fe 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 417 2.0E-19 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 APY29_RS19065 756a4112cb9a91e5f359f7f5e23d98fe 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 485 33.779 T 28-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 APY29_RS19065 756a4112cb9a91e5f359f7f5e23d98fe 495 SUPERFAMILY SSF53623 100 331 6.93E-75 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 APY29_RS19065 756a4112cb9a91e5f359f7f5e23d98fe 495 Gene3D G3DSA:3.90.190.20 335 489 1.4E-45 T 28-03-2018 APY29_RS11240 877c237d1e9acab5fdc646819ce55d2b 210 Pfam PF03466 LysR substrate binding domain 89 198 7.9E-21 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS11240 877c237d1e9acab5fdc646819ce55d2b 210 Gene3D G3DSA:3.40.190.10 176 209 8.9E-5 T 28-03-2018 APY29_RS11240 877c237d1e9acab5fdc646819ce55d2b 210 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS11240 877c237d1e9acab5fdc646819ce55d2b 210 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.2E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS11240 877c237d1e9acab5fdc646819ce55d2b 210 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.2E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS11240 877c237d1e9acab5fdc646819ce55d2b 210 SUPERFAMILY SSF46785 1 85 2.42E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS11240 877c237d1e9acab5fdc646819ce55d2b 210 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.3E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS11240 877c237d1e9acab5fdc646819ce55d2b 210 Gene3D G3DSA:1.10.10.10 1 83 1.0E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS11240 877c237d1e9acab5fdc646819ce55d2b 210 Gene3D G3DSA:3.40.190.10 88 175 1.0E-18 T 28-03-2018 APY29_RS11240 877c237d1e9acab5fdc646819ce55d2b 210 SUPERFAMILY SSF53850 93 197 2.02E-20 T 28-03-2018 APY29_RS12730 c91fa3c15e7d229cbb58869d1b77a0a3 401 Pfam PF00700 Bacterial flagellin C-terminal helical region 318 398 4.6E-5 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APY29_RS12730 c91fa3c15e7d229cbb58869d1b77a0a3 401 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.0E-22 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APY29_RS12730 c91fa3c15e7d229cbb58869d1b77a0a3 401 Gene3D G3DSA:1.20.1330.10 44 366 3.5E-30 T 28-03-2018 APY29_RS12730 c91fa3c15e7d229cbb58869d1b77a0a3 401 SUPERFAMILY SSF64518 1 401 3.27E-77 T 28-03-2018 APY29_RS12730 c91fa3c15e7d229cbb58869d1b77a0a3 401 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 400 2.9E-109 T 28-03-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 APY29_RS18515 e93e702f3d71b1cfd72eaa8283ba7ed2 489 Gene3D G3DSA:3.40.605.10 5 275 1.5E-82 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APY29_RS18515 e93e702f3d71b1cfd72eaa8283ba7ed2 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APY29_RS18515 e93e702f3d71b1cfd72eaa8283ba7ed2 489 Gene3D G3DSA:3.40.309.10 276 472 1.6E-59 T 28-03-2018 APY29_RS18515 e93e702f3d71b1cfd72eaa8283ba7ed2 489 SUPERFAMILY SSF53720 16 487 1.7E-144 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APY29_RS18515 e93e702f3d71b1cfd72eaa8283ba7ed2 489 Pfam PF00171 Aldehyde dehydrogenase family 25 485 9.3E-149 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APY29_RS06325 a373ea8673214d5c0769f24665bdde98 174 Gene3D G3DSA:3.30.420.10 2 161 3.1E-42 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS06325 a373ea8673214d5c0769f24665bdde98 174 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 156 1.3E-48 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APY29_RS06325 a373ea8673214d5c0769f24665bdde98 174 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 115 149 - T 28-03-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 APY29_RS06325 a373ea8673214d5c0769f24665bdde98 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.9E-34 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APY29_RS06325 a373ea8673214d5c0769f24665bdde98 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 140 152 1.9E-34 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APY29_RS06325 a373ea8673214d5c0769f24665bdde98 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 109 128 1.9E-34 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APY29_RS06325 a373ea8673214d5c0769f24665bdde98 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 63 79 1.9E-34 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APY29_RS06325 a373ea8673214d5c0769f24665bdde98 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 85 101 1.9E-34 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APY29_RS06325 a373ea8673214d5c0769f24665bdde98 174 SUPERFAMILY SSF53098 3 156 4.05E-46 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS06325 a373ea8673214d5c0769f24665bdde98 174 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 152 3.4E-46 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APY29_RS06325 a373ea8673214d5c0769f24665bdde98 174 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 155 44.624 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APY29_RS22145 2f0c9f2021a47e699b653365a81f6d4d 259 Gene3D G3DSA:3.40.50.10090 11 126 3.1E-17 T 28-03-2018 APY29_RS22145 2f0c9f2021a47e699b653365a81f6d4d 259 SUPERFAMILY SSF69618 11 249 3.66E-43 T 28-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APY29_RS22145 2f0c9f2021a47e699b653365a81f6d4d 259 Gene3D G3DSA:3.40.50.10090 131 252 1.3E-8 T 28-03-2018 APY29_RS22145 2f0c9f2021a47e699b653365a81f6d4d 259 Pfam PF02602 Uroporphyrinogen-III synthase HemD 25 238 4.6E-22 T 28-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APY29_RS06160 f7630639d215ac48362fb0b89abffdf5 429 Gene3D G3DSA:2.40.37.10 270 399 3.8E-31 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 APY29_RS06160 f7630639d215ac48362fb0b89abffdf5 429 SUPERFAMILY SSF50621 255 393 1.26E-36 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 APY29_RS06160 f7630639d215ac48362fb0b89abffdf5 429 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 74 86 4.2E-10 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 APY29_RS06160 f7630639d215ac48362fb0b89abffdf5 429 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 4.2E-10 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 APY29_RS06160 f7630639d215ac48362fb0b89abffdf5 429 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 186 199 4.2E-10 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 APY29_RS06160 f7630639d215ac48362fb0b89abffdf5 429 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 54 72 4.2E-10 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 APY29_RS06160 f7630639d215ac48362fb0b89abffdf5 429 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 37 280 2.3E-27 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 APY29_RS06160 f7630639d215ac48362fb0b89abffdf5 429 SUPERFAMILY SSF51419 31 283 3.53E-61 T 28-03-2018 IPR029066 PLP-binding barrel APY29_RS06160 f7630639d215ac48362fb0b89abffdf5 429 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 28 372 1.1E-14 T 28-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 APY29_RS06160 f7630639d215ac48362fb0b89abffdf5 429 Gene3D G3DSA:3.20.20.10 33 269 3.7E-54 T 28-03-2018 IPR029066 PLP-binding barrel APY29_RS02830 f4a9705dbaa5a2aa56a4f025819c3d49 133 Pfam PF13202 EF hand 104 121 1.4E-5 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 APY29_RS02830 f4a9705dbaa5a2aa56a4f025819c3d49 133 SUPERFAMILY SSF47473 76 123 1.66E-8 T 28-03-2018 IPR011992 EF-hand domain pair APY29_RS02830 f4a9705dbaa5a2aa56a4f025819c3d49 133 Gene3D G3DSA:1.10.238.10 73 124 2.1E-7 T 28-03-2018 APY29_RS02830 f4a9705dbaa5a2aa56a4f025819c3d49 133 ProSitePatterns PS00018 EF-hand calcium-binding domain. 108 120 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site APY29_RS20210 09248e8daea9b8720aaeef54f44c6ecd 143 SUPERFAMILY SSF55874 30 126 1.16E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS20210 09248e8daea9b8720aaeef54f44c6ecd 143 Pfam PF13581 Histidine kinase-like ATPase domain 8 130 1.9E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS20210 09248e8daea9b8720aaeef54f44c6ecd 143 Gene3D G3DSA:3.30.565.10 1 140 3.2E-8 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS21325 dd01e21ed5b78d37637403309844c12a 273 Gene3D G3DSA:1.20.1080.10 1 264 1.1E-72 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 APY29_RS21325 dd01e21ed5b78d37637403309844c12a 273 Pfam PF00230 Major intrinsic protein 4 248 1.9E-49 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 APY29_RS21325 dd01e21ed5b78d37637403309844c12a 273 PRINTS PR00783 Major intrinsic protein family signature 183 205 8.2E-42 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 APY29_RS21325 dd01e21ed5b78d37637403309844c12a 273 PRINTS PR00783 Major intrinsic protein family signature 49 73 8.2E-42 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 APY29_RS21325 dd01e21ed5b78d37637403309844c12a 273 PRINTS PR00783 Major intrinsic protein family signature 86 105 8.2E-42 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 APY29_RS21325 dd01e21ed5b78d37637403309844c12a 273 PRINTS PR00783 Major intrinsic protein family signature 149 167 8.2E-42 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 APY29_RS21325 dd01e21ed5b78d37637403309844c12a 273 PRINTS PR00783 Major intrinsic protein family signature 231 251 8.2E-42 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 APY29_RS21325 dd01e21ed5b78d37637403309844c12a 273 PRINTS PR00783 Major intrinsic protein family signature 7 26 8.2E-42 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 APY29_RS21325 dd01e21ed5b78d37637403309844c12a 273 TIGRFAM TIGR00861 MIP: MIP family channel proteins 14 248 6.1E-60 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 APY29_RS21325 dd01e21ed5b78d37637403309844c12a 273 SUPERFAMILY SSF81338 5 253 7.85E-64 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 APY29_RS21325 dd01e21ed5b78d37637403309844c12a 273 ProSitePatterns PS00221 MIP family signature. 67 75 - T 28-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 APY29_RS09330 deef142fa0aab7831368d3b535f286ba 238 Gene3D G3DSA:1.10.10.60 188 236 5.6E-13 T 28-03-2018 APY29_RS09330 deef142fa0aab7831368d3b535f286ba 238 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 216 232 2.1E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APY29_RS09330 deef142fa0aab7831368d3b535f286ba 238 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 201 216 2.1E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APY29_RS09330 deef142fa0aab7831368d3b535f286ba 238 SUPERFAMILY SSF55785 13 122 4.54E-11 T 28-03-2018 IPR000014 PAS domain APY29_RS09330 deef142fa0aab7831368d3b535f286ba 238 SUPERFAMILY SSF46689 187 233 3.45E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS09330 deef142fa0aab7831368d3b535f286ba 238 Pfam PF08448 PAS fold 17 125 8.4E-20 T 28-03-2018 IPR013656 PAS fold-4 APY29_RS09330 deef142fa0aab7831368d3b535f286ba 238 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 187 228 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APY29_RS09330 deef142fa0aab7831368d3b535f286ba 238 SMART SM00342 150 232 1.1E-26 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS09330 deef142fa0aab7831368d3b535f286ba 238 Gene3D G3DSA:3.30.450.20 11 125 1.3E-10 T 28-03-2018 APY29_RS09330 deef142fa0aab7831368d3b535f286ba 238 Gene3D G3DSA:1.10.10.60 126 187 1.7E-13 T 28-03-2018 APY29_RS09330 deef142fa0aab7831368d3b535f286ba 238 SUPERFAMILY SSF46689 133 183 1.79E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS09330 deef142fa0aab7831368d3b535f286ba 238 Pfam PF12833 Helix-turn-helix domain 156 233 1.2E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS02530 b28616c79c7664904db7917eb4d185a7 155 Gene3D G3DSA:2.70.40.10 1 116 2.0E-37 T 28-03-2018 APY29_RS02530 b28616c79c7664904db7917eb4d185a7 155 Gene3D G3DSA:2.70.40.10 117 154 8.2E-15 T 28-03-2018 APY29_RS02530 b28616c79c7664904db7917eb4d185a7 155 Pfam PF00692 dUTPase 21 153 3.2E-33 T 28-03-2018 IPR029054 dUTPase-like APY29_RS02530 b28616c79c7664904db7917eb4d185a7 155 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 10 154 32.568 T 28-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 APY29_RS02530 b28616c79c7664904db7917eb4d185a7 155 SUPERFAMILY SSF51283 9 154 1.57E-48 T 28-03-2018 IPR029054 dUTPase-like APY29_RS02530 b28616c79c7664904db7917eb4d185a7 155 TIGRFAM TIGR00576 dut: dUTP diphosphatase 21 153 3.0E-44 T 28-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 APY29_RS19365 f2427b03f237de255a01a32ceb7d38b6 272 Pfam PF01323 DSBA-like thioredoxin domain 151 257 1.5E-8 T 28-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 APY29_RS19365 f2427b03f237de255a01a32ceb7d38b6 272 Gene3D G3DSA:3.40.30.10 85 272 6.3E-33 T 28-03-2018 APY29_RS19365 f2427b03f237de255a01a32ceb7d38b6 272 SUPERFAMILY SSF52833 82 262 8.75E-36 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS19360 d39473d1c73bfd125805ac45438ff68a 216 ProSitePatterns PS00194 Thioredoxin family active site. 52 70 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 APY29_RS19360 d39473d1c73bfd125805ac45438ff68a 216 Gene3D G3DSA:3.40.30.10 24 216 1.3E-36 T 28-03-2018 APY29_RS19360 d39473d1c73bfd125805ac45438ff68a 216 SUPERFAMILY SSF52833 27 206 1.42E-40 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS19360 d39473d1c73bfd125805ac45438ff68a 216 PIRSF PIRSF001488 7 211 9.6E-34 T 28-03-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL APY29_RS19360 d39473d1c73bfd125805ac45438ff68a 216 Pfam PF13462 Thioredoxin 49 199 2.6E-11 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS22625 623c9ded8ae9306cf937295e2f282991 490 SUPERFAMILY SSF48179 282 479 2.14E-51 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APY29_RS22625 623c9ded8ae9306cf937295e2f282991 490 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 215 453 9.0E-63 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 APY29_RS22625 623c9ded8ae9306cf937295e2f282991 490 SUPERFAMILY SSF51735 7 279 9.05E-90 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS22625 623c9ded8ae9306cf937295e2f282991 490 PRINTS PR00084 Mannitol dehydrogenase signature 247 262 2.4E-15 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APY29_RS22625 623c9ded8ae9306cf937295e2f282991 490 PRINTS PR00084 Mannitol dehydrogenase signature 178 191 2.4E-15 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APY29_RS22625 623c9ded8ae9306cf937295e2f282991 490 PRINTS PR00084 Mannitol dehydrogenase signature 217 230 2.4E-15 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APY29_RS22625 623c9ded8ae9306cf937295e2f282991 490 PRINTS PR00084 Mannitol dehydrogenase signature 32 42 2.4E-15 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APY29_RS22625 623c9ded8ae9306cf937295e2f282991 490 Gene3D G3DSA:1.10.1040.10 281 487 4.4E-57 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APY29_RS22625 623c9ded8ae9306cf937295e2f282991 490 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 31 187 9.0E-37 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 APY29_RS22625 623c9ded8ae9306cf937295e2f282991 490 Gene3D G3DSA:3.40.50.720 4 280 3.4E-105 T 28-03-2018 APY29_RS09080 34719f792c52d42b5b44b14b795c9557 728 Gene3D G3DSA:1.50.10.10 51 440 1.1E-33 T 28-03-2018 APY29_RS09080 34719f792c52d42b5b44b14b795c9557 728 SUPERFAMILY SSF48208 91 449 2.24E-35 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 APY29_RS09080 34719f792c52d42b5b44b14b795c9557 728 Pfam PF06202 Amylo-alpha-1,6-glucosidase 106 290 1.3E-5 T 28-03-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 APY29_RS02650 60162af9fe4d734d78fbdcf69410531e 1066 SUPERFAMILY SSF53720 585 1051 2.09E-127 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APY29_RS02650 60162af9fe4d734d78fbdcf69410531e 1066 Pfam PF01619 Proline dehydrogenase 210 501 2.9E-91 T 28-03-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 APY29_RS02650 60162af9fe4d734d78fbdcf69410531e 1066 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 83 196 2.0E-44 T 28-03-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 APY29_RS02650 60162af9fe4d734d78fbdcf69410531e 1066 Gene3D G3DSA:3.40.309.10 837 1027 2.4E-46 T 28-03-2018 APY29_RS02650 60162af9fe4d734d78fbdcf69410531e 1066 SUPERFAMILY SSF81935 27 198 2.48E-63 T 28-03-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 APY29_RS02650 60162af9fe4d734d78fbdcf69410531e 1066 PIRSF PIRSF000197 13 1062 0.0 T 28-03-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 APY29_RS02650 60162af9fe4d734d78fbdcf69410531e 1066 SUPERFAMILY SSF51730 199 544 2.67E-113 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like APY29_RS02650 60162af9fe4d734d78fbdcf69410531e 1066 Gene3D G3DSA:3.40.605.10 578 836 1.3E-71 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APY29_RS02650 60162af9fe4d734d78fbdcf69410531e 1066 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 543 1044 2.2E-211 T 28-03-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 APY29_RS02650 60162af9fe4d734d78fbdcf69410531e 1066 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 848 859 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APY29_RS02650 60162af9fe4d734d78fbdcf69410531e 1066 Pfam PF00171 Aldehyde dehydrogenase family 589 1048 4.3E-117 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APY29_RS02650 60162af9fe4d734d78fbdcf69410531e 1066 Gene3D G3DSA:1.20.5.550 27 75 1.6E-17 T 28-03-2018 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 APY29_RS02650 60162af9fe4d734d78fbdcf69410531e 1066 Gene3D G3DSA:3.20.20.220 123 532 7.4E-99 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like APY29_RS18195 b5344ce75aed24a737a46d3b64c8e606 361 SUPERFAMILY SSF75620 12 354 2.62E-129 T 28-03-2018 APY29_RS18195 b5344ce75aed24a737a46d3b64c8e606 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APY29_RS18195 b5344ce75aed24a737a46d3b64c8e606 361 Gene3D G3DSA:1.20.58.410 4 100 2.0E-13 T 28-03-2018 APY29_RS18195 b5344ce75aed24a737a46d3b64c8e606 361 Pfam PF00472 RF-1 domain 212 321 9.9E-42 T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APY29_RS18195 b5344ce75aed24a737a46d3b64c8e606 361 Pfam PF03462 PCRF domain 13 203 8.1E-70 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 APY29_RS18195 b5344ce75aed24a737a46d3b64c8e606 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 358 39.469 T 28-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 APY29_RS18195 b5344ce75aed24a737a46d3b64c8e606 361 SMART SM00937 63 178 2.5E-63 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 APY29_RS18195 b5344ce75aed24a737a46d3b64c8e606 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 358 5.1E-153 T 28-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 APY29_RS18195 b5344ce75aed24a737a46d3b64c8e606 361 Gene3D G3DSA:3.30.160.20 209 291 4.2E-33 T 28-03-2018 APY29_RS04300 bef776067427189334479a824925d974 280 SUPERFAMILY SSF52540 23 249 6.26E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS04300 bef776067427189334479a824925d974 280 Gene3D G3DSA:3.40.50.300 20 279 9.2E-58 T 28-03-2018 APY29_RS04300 bef776067427189334479a824925d974 280 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS04300 bef776067427189334479a824925d974 280 SMART SM00382 48 238 8.1E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS04300 bef776067427189334479a824925d974 280 Pfam PF00005 ABC transporter 41 190 5.2E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS08115 9aa5de892875e944593faf5876159644 166 SUPERFAMILY SSF89562 3 158 6.41E-48 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein APY29_RS08115 9aa5de892875e944593faf5876159644 166 Pfam PF03737 Aldolase/RraA 5 152 1.3E-40 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein APY29_RS08115 9aa5de892875e944593faf5876159644 166 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 152 3.2E-68 T 28-03-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 APY29_RS08115 9aa5de892875e944593faf5876159644 166 Gene3D G3DSA:3.50.30.40 1 162 7.8E-45 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein APY29_RS10185 65eef4bd2969f57ddc9e35afb657c4e0 705 SMART SM00052 452 697 4.9E-110 T 28-03-2018 IPR001633 EAL domain APY29_RS10185 65eef4bd2969f57ddc9e35afb657c4e0 705 Gene3D G3DSA:3.30.70.270 260 442 2.1E-54 T 28-03-2018 APY29_RS10185 65eef4bd2969f57ddc9e35afb657c4e0 705 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 274 438 6.2E-36 T 28-03-2018 IPR000160 GGDEF domain APY29_RS10185 65eef4bd2969f57ddc9e35afb657c4e0 705 Pfam PF00563 EAL domain 459 692 2.1E-70 T 28-03-2018 IPR001633 EAL domain APY29_RS10185 65eef4bd2969f57ddc9e35afb657c4e0 705 Gene3D G3DSA:3.20.20.450 443 705 3.8E-96 T 28-03-2018 IPR001633 EAL domain APY29_RS10185 65eef4bd2969f57ddc9e35afb657c4e0 705 SMART SM00267 266 442 1.8E-52 T 28-03-2018 IPR000160 GGDEF domain APY29_RS10185 65eef4bd2969f57ddc9e35afb657c4e0 705 Pfam PF00990 Diguanylate cyclase, GGDEF domain 277 437 2.0E-42 T 28-03-2018 IPR000160 GGDEF domain APY29_RS10185 65eef4bd2969f57ddc9e35afb657c4e0 705 Pfam PF00672 HAMP domain 218 267 2.2E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS10185 65eef4bd2969f57ddc9e35afb657c4e0 705 Gene3D G3DSA:3.30.450.20 23 178 8.1E-5 T 28-03-2018 APY29_RS10185 65eef4bd2969f57ddc9e35afb657c4e0 705 SMART SM00304 218 271 7.9E-13 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS10185 65eef4bd2969f57ddc9e35afb657c4e0 705 Pfam PF17203 Single cache domain 3 60 172 3.1E-9 T 28-03-2018 IPR033463 Single cache domain 3 APY29_RS10185 65eef4bd2969f57ddc9e35afb657c4e0 705 SUPERFAMILY SSF103190 79 173 2.04E-5 T 28-03-2018 IPR029151 Periplasmic sensor domain-like APY29_RS10185 65eef4bd2969f57ddc9e35afb657c4e0 705 SUPERFAMILY SSF158472 218 267 9.29E-10 T 28-03-2018 APY29_RS10185 65eef4bd2969f57ddc9e35afb657c4e0 705 SUPERFAMILY SSF55073 282 443 2.55E-44 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS10185 65eef4bd2969f57ddc9e35afb657c4e0 705 SUPERFAMILY SSF141868 457 702 2.88E-86 T 28-03-2018 IPR001633 EAL domain APY29_RS19745 ea5fee02f909ef1539acf3b486d036f9 653 Pfam PF13570 PQQ-like domain 507 547 2.1E-7 T 28-03-2018 IPR025666 Pyrrolo-quinoline quinone-like domain APY29_RS19745 ea5fee02f909ef1539acf3b486d036f9 653 SMART SM00564 523 555 6.6E-5 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS19745 ea5fee02f909ef1539acf3b486d036f9 653 SMART SM00564 153 185 1.1E-5 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS19745 ea5fee02f909ef1539acf3b486d036f9 653 SMART SM00564 199 236 22.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS19745 ea5fee02f909ef1539acf3b486d036f9 653 SMART SM00564 97 134 720.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS19745 ea5fee02f909ef1539acf3b486d036f9 653 Pfam PF13360 PQQ-like domain 125 240 2.6E-12 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat APY29_RS19745 ea5fee02f909ef1539acf3b486d036f9 653 SUPERFAMILY SSF50998 48 593 9.16E-143 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APY29_RS19745 ea5fee02f909ef1539acf3b486d036f9 653 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 40 583 7.6E-179 T 28-03-2018 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 APY29_RS19745 ea5fee02f909ef1539acf3b486d036f9 653 Gene3D G3DSA:2.140.10.10 24 601 1.4E-102 T 28-03-2018 APY29_RS16155 b377f251ad1008506ac5b8e7f312485d 226 SMART SM00535 20 148 7.5E-48 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 APY29_RS16155 b377f251ad1008506ac5b8e7f312485d 226 Pfam PF14622 Ribonuclease-III-like 18 138 1.5E-30 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 APY29_RS16155 b377f251ad1008506ac5b8e7f312485d 226 SMART SM00358 155 223 7.0E-19 T 28-03-2018 IPR014720 Double-stranded RNA-binding domain APY29_RS16155 b377f251ad1008506ac5b8e7f312485d 226 SUPERFAMILY SSF54768 108 222 1.15E-25 T 28-03-2018 APY29_RS16155 b377f251ad1008506ac5b8e7f312485d 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 27.342 T 28-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 APY29_RS16155 b377f251ad1008506ac5b8e7f312485d 226 SUPERFAMILY SSF69065 11 157 2.79E-43 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 APY29_RS16155 b377f251ad1008506ac5b8e7f312485d 226 Gene3D G3DSA:1.10.1520.10 4 148 2.2E-38 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 APY29_RS16155 b377f251ad1008506ac5b8e7f312485d 226 Pfam PF00035 Double-stranded RNA binding motif 155 222 7.1E-11 T 28-03-2018 IPR014720 Double-stranded RNA-binding domain APY29_RS16155 b377f251ad1008506ac5b8e7f312485d 226 Gene3D G3DSA:3.30.160.20 154 226 6.2E-19 T 28-03-2018 APY29_RS16155 b377f251ad1008506ac5b8e7f312485d 226 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 APY29_RS16155 b377f251ad1008506ac5b8e7f312485d 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 12 221 1.2E-68 T 28-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 APY29_RS09575 83f753f55d1ee1a6c2e404195d3fb2cc 381 Gene3D G3DSA:3.20.20.105 1 373 1.5E-151 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 APY29_RS09575 83f753f55d1ee1a6c2e404195d3fb2cc 381 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 368 55.632 T 28-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 APY29_RS09575 83f753f55d1ee1a6c2e404195d3fb2cc 381 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 371 8.5E-150 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 APY29_RS09575 83f753f55d1ee1a6c2e404195d3fb2cc 381 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 371 1.2E-155 T 28-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 APY29_RS09575 83f753f55d1ee1a6c2e404195d3fb2cc 381 SUPERFAMILY SSF51713 3 368 8.37E-153 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 APY29_RS09575 83f753f55d1ee1a6c2e404195d3fb2cc 381 Pfam PF01702 Queuine tRNA-ribosyltransferase 129 365 3.8E-86 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 APY29_RS05010 cef1dde9888eb41deb22842e3f9c94a4 512 SMART SM00283 88 335 1.2E-30 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS05010 cef1dde9888eb41deb22842e3f9c94a4 512 SUPERFAMILY SSF58104 79 339 5.93E-44 T 28-03-2018 APY29_RS05010 cef1dde9888eb41deb22842e3f9c94a4 512 Gene3D G3DSA:1.10.287.950 113 338 7.3E-33 T 28-03-2018 APY29_RS05010 cef1dde9888eb41deb22842e3f9c94a4 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 215 244 5.2E-25 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS05010 cef1dde9888eb41deb22842e3f9c94a4 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 186 213 5.2E-25 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS05010 cef1dde9888eb41deb22842e3f9c94a4 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 109 138 5.2E-25 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS05010 cef1dde9888eb41deb22842e3f9c94a4 512 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 148 298 2.4E-29 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS17380 14bf360d3149e7e68b442c162c4d2cb1 451 Gene3D G3DSA:3.60.120.10 1 451 4.8E-133 T 28-03-2018 IPR005801 ADC synthase GO:0009058 APY29_RS17380 14bf360d3149e7e68b442c162c4d2cb1 451 Pfam PF00425 chorismate binding enzyme 187 440 2.7E-91 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal APY29_RS17380 14bf360d3149e7e68b442c162c4d2cb1 451 PRINTS PR00095 Anthranilate synthase component I signature 382 396 2.9E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 APY29_RS17380 14bf360d3149e7e68b442c162c4d2cb1 451 PRINTS PR00095 Anthranilate synthase component I signature 288 301 2.9E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 APY29_RS17380 14bf360d3149e7e68b442c162c4d2cb1 451 PRINTS PR00095 Anthranilate synthase component I signature 397 411 2.9E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 APY29_RS17380 14bf360d3149e7e68b442c162c4d2cb1 451 PRINTS PR00095 Anthranilate synthase component I signature 302 315 2.9E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 APY29_RS17380 14bf360d3149e7e68b442c162c4d2cb1 451 SUPERFAMILY SSF56322 7 449 7.98E-123 T 28-03-2018 IPR005801 ADC synthase GO:0009058 APY29_RS17380 14bf360d3149e7e68b442c162c4d2cb1 451 TIGRFAM TIGR01824 PabB-clade2: aminodeoxychorismate synthase, component I 96 443 3.4E-147 T 28-03-2018 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I APY29_RS21575 932a6a46602fd277e8a4902444dc479a 142 SUPERFAMILY SSF46955 9 120 4.03E-24 T 28-03-2018 IPR009061 Putative DNA-binding domain APY29_RS21575 932a6a46602fd277e8a4902444dc479a 142 Pfam PF13411 MerR HTH family regulatory protein 10 70 2.4E-12 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APY29_RS21575 932a6a46602fd277e8a4902444dc479a 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 10 21 1.7E-5 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APY29_RS21575 932a6a46602fd277e8a4902444dc479a 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 21 34 1.7E-5 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APY29_RS21575 932a6a46602fd277e8a4902444dc479a 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 1.7E-5 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APY29_RS21575 932a6a46602fd277e8a4902444dc479a 142 Gene3D G3DSA:1.10.1660.10 4 61 1.1E-18 T 28-03-2018 APY29_RS21575 932a6a46602fd277e8a4902444dc479a 142 SMART SM00422 9 77 1.0E-15 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APY29_RS21575 932a6a46602fd277e8a4902444dc479a 142 Gene3D G3DSA:1.10.1660.10 62 142 3.1E-10 T 28-03-2018 APY29_RS16660 6cf2295d5565d57b4cb185d101a2f2fa 269 Gene3D G3DSA:1.10.10.10 22 264 4.5E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS16660 6cf2295d5565d57b4cb185d101a2f2fa 269 SUPERFAMILY SSF46785 30 95 2.69E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS16530 7509cf5f2f8f302f75f837c638446976 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 1.5E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS16530 7509cf5f2f8f302f75f837c638446976 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 1.5E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS16530 7509cf5f2f8f302f75f837c638446976 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 1.5E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS16530 7509cf5f2f8f302f75f837c638446976 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 1.5E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS16530 7509cf5f2f8f302f75f837c638446976 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 1.5E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS16530 7509cf5f2f8f302f75f837c638446976 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 1.5E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS16530 7509cf5f2f8f302f75f837c638446976 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 1.5E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS16530 7509cf5f2f8f302f75f837c638446976 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 1.5E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS16530 7509cf5f2f8f302f75f837c638446976 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 1.5E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS16530 7509cf5f2f8f302f75f837c638446976 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 1.5E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS16530 7509cf5f2f8f302f75f837c638446976 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 1.5E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS16530 7509cf5f2f8f302f75f837c638446976 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 1.5E-98 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS16530 7509cf5f2f8f302f75f837c638446976 666 Gene3D G3DSA:1.20.210.10 43 561 2.5E-190 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS16530 7509cf5f2f8f302f75f837c638446976 666 Gene3D G3DSA:1.10.287.70 574 640 1.4E-15 T 28-03-2018 APY29_RS16530 7509cf5f2f8f302f75f837c638446976 666 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 28-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS16530 7509cf5f2f8f302f75f837c638446976 666 SUPERFAMILY SSF81442 43 559 4.06E-182 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS16530 7509cf5f2f8f302f75f837c638446976 666 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 504 1.1E-139 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS16530 7509cf5f2f8f302f75f837c638446976 666 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 28-03-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 APY29_RS07620 f21926a598c2438436ab57261ac28904 468 Gene3D G3DSA:3.40.1190.10 99 308 6.2E-46 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 APY29_RS07620 f21926a598c2438436ab57261ac28904 468 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 9 455 27.692 T 28-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS07620 f21926a598c2438436ab57261ac28904 468 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 451 1.1E-88 T 28-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS07620 f21926a598c2438436ab57261ac28904 468 SUPERFAMILY SSF53623 117 307 2.35E-41 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 APY29_RS07620 f21926a598c2438436ab57261ac28904 468 Gene3D G3DSA:3.90.190.20 310 452 2.2E-24 T 28-03-2018 APY29_RS07620 f21926a598c2438436ab57261ac28904 468 Pfam PF08245 Mur ligase middle domain 120 290 3.5E-22 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 APY29_RS07620 f21926a598c2438436ab57261ac28904 468 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 383 3.8E-6 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 APY29_RS07620 f21926a598c2438436ab57261ac28904 468 SUPERFAMILY SSF53244 310 452 1.42E-26 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 APY29_RS07620 f21926a598c2438436ab57261ac28904 468 Gene3D G3DSA:3.40.50.720 2 98 8.6E-6 T 28-03-2018 APY29_RS07620 f21926a598c2438436ab57261ac28904 468 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 118 141 - T 28-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 APY29_RS01265 9dd8eb131b40c501dbc657d1dc631809 605 Pfam PF05960 Bacterial protein of unknown function (DUF885) 70 583 6.4E-155 T 28-03-2018 IPR010281 Protein of unknown function DUF885 APY29_RS09265 93378d943941ddf9c8a7982d287cdd4d 158 SUPERFAMILY SSF117070 16 128 5.1E-5 T 28-03-2018 APY29_RS09265 93378d943941ddf9c8a7982d287cdd4d 158 Pfam PF03168 Late embryogenesis abundant protein 50 139 1.1E-6 T 28-03-2018 IPR004864 Late embryogenesis abundant protein, LEA-14 APY29_RS09265 93378d943941ddf9c8a7982d287cdd4d 158 Gene3D G3DSA:2.60.40.10 27 135 6.6E-4 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS12100 b70aff929d08be0668ac96e6779468a0 306 SUPERFAMILY SSF53187 33 290 5.62E-37 T 28-03-2018 APY29_RS12100 b70aff929d08be0668ac96e6779468a0 306 Gene3D G3DSA:3.40.630.10 21 305 4.9E-32 T 28-03-2018 APY29_RS12100 b70aff929d08be0668ac96e6779468a0 306 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 79 178 1.6E-7 T 28-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 APY29_RS21975 bb5b80bdc5097b60af06f6e12eea6693 209 Pfam PF01553 Acyltransferase 59 168 1.3E-11 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APY29_RS21975 bb5b80bdc5097b60af06f6e12eea6693 209 SUPERFAMILY SSF69593 20 185 7.45E-22 T 28-03-2018 APY29_RS21975 bb5b80bdc5097b60af06f6e12eea6693 209 SMART SM00563 59 171 8.3E-25 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APY29_RS21975 bb5b80bdc5097b60af06f6e12eea6693 209 Gene3D G3DSA:3.40.1130.10 25 189 4.4E-24 T 28-03-2018 APY29_RS22375 9c8761afe91964d3c14fe3d0c4e714ab 580 Gene3D G3DSA:2.30.42.10 479 563 0.0092 T 28-03-2018 APY29_RS22375 9c8761afe91964d3c14fe3d0c4e714ab 580 SUPERFAMILY SSF55486 277 457 1.32E-8 T 28-03-2018 APY29_RS22375 9c8761afe91964d3c14fe3d0c4e714ab 580 Pfam PF05299 M61 glycyl aminopeptidase 319 371 2.0E-5 T 28-03-2018 IPR007963 Peptidase M61, catalytic domain APY29_RS22375 9c8761afe91964d3c14fe3d0c4e714ab 580 PIRSF PIRSF016493 48 580 4.2E-86 T 28-03-2018 IPR024191 Peptidase M61 APY29_RS22375 9c8761afe91964d3c14fe3d0c4e714ab 580 Gene3D G3DSA:1.10.390.10 300 463 2.2E-11 T 28-03-2018 APY29_RS01510 a435cecd2aa1eba0a3d8a8892734fa4a 426 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 284 421 4.3E-42 T 28-03-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain APY29_RS01510 a435cecd2aa1eba0a3d8a8892734fa4a 426 SUPERFAMILY SSF103088 306 423 5.76E-23 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS01510 a435cecd2aa1eba0a3d8a8892734fa4a 426 Gene3D G3DSA:3.30.1330.60 283 426 5.5E-28 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS01510 a435cecd2aa1eba0a3d8a8892734fa4a 426 Pfam PF09850 Type VI secretion system protein DotU 48 248 1.1E-66 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU APY29_RS01510 a435cecd2aa1eba0a3d8a8892734fa4a 426 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 47 255 4.9E-71 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU APY29_RS01510 a435cecd2aa1eba0a3d8a8892734fa4a 426 Pfam PF00691 OmpA family 317 415 1.2E-11 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS22180 c67c356079507663d63c5e69f2fd7473 159 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 45 55 - T 28-03-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 APY29_RS22180 c67c356079507663d63c5e69f2fd7473 159 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 45 67 1.2E-7 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 APY29_RS22180 c67c356079507663d63c5e69f2fd7473 159 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 122 148 1.2E-7 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 APY29_RS22180 c67c356079507663d63c5e69f2fd7473 159 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 82 91 1.2E-7 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 APY29_RS22180 c67c356079507663d63c5e69f2fd7473 159 SUPERFAMILY SSF49329 5 147 1.44E-41 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 APY29_RS22180 c67c356079507663d63c5e69f2fd7473 159 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 136 147 - T 28-03-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 APY29_RS22180 c67c356079507663d63c5e69f2fd7473 159 Gene3D G3DSA:2.60.40.200 2 153 9.0E-39 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 APY29_RS22180 c67c356079507663d63c5e69f2fd7473 159 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 14 147 4.1E-37 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 APY29_RS18360 125b819669ea8e5a1644c74b4a9f9b7c 313 Pfam PF00561 alpha/beta hydrolase fold 35 298 1.2E-31 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS18360 125b819669ea8e5a1644c74b4a9f9b7c 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 7.8E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS18360 125b819669ea8e5a1644c74b4a9f9b7c 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 7.8E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS18360 125b819669ea8e5a1644c74b4a9f9b7c 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 7.8E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS18360 125b819669ea8e5a1644c74b4a9f9b7c 313 Gene3D G3DSA:3.40.50.1820 1 313 1.3E-65 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS18360 125b819669ea8e5a1644c74b4a9f9b7c 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 1.2E-13 T 28-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 APY29_RS18360 125b819669ea8e5a1644c74b4a9f9b7c 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 1.2E-13 T 28-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 APY29_RS18360 125b819669ea8e5a1644c74b4a9f9b7c 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 1.2E-13 T 28-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 APY29_RS18360 125b819669ea8e5a1644c74b4a9f9b7c 313 PIRSF PIRSF006431 1 313 9.4E-140 T 28-03-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 APY29_RS18360 125b819669ea8e5a1644c74b4a9f9b7c 313 SUPERFAMILY SSF53474 2 310 3.92E-67 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS18360 125b819669ea8e5a1644c74b4a9f9b7c 313 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 311 1.7E-152 T 28-03-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 APY29_RS16065 1d3dd5946ba83e8d86483d3db5c45ba2 340 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 16 339 1.3E-145 T 28-03-2018 IPR026360 Putative exonuclease, DNA ligase-associated APY29_RS16065 1d3dd5946ba83e8d86483d3db5c45ba2 340 SUPERFAMILY SSF56281 19 329 1.4E-59 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS16065 1d3dd5946ba83e8d86483d3db5c45ba2 340 Gene3D G3DSA:3.60.15.10 215 336 0.0016 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS16065 1d3dd5946ba83e8d86483d3db5c45ba2 340 Gene3D G3DSA:3.60.15.10 27 205 1.8E-25 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS02280 a2932c3337283453434ca1d0e0887bdc 245 SUPERFAMILY SSF56784 5 228 3.01E-45 T 28-03-2018 IPR023214 HAD-like domain APY29_RS02280 a2932c3337283453434ca1d0e0887bdc 245 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 199 1.0E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS02280 a2932c3337283453434ca1d0e0887bdc 245 Gene3D G3DSA:3.40.50.1000 89 234 5.8E-28 T 28-03-2018 IPR023214 HAD-like domain APY29_RS02280 a2932c3337283453434ca1d0e0887bdc 245 Pfam PF13419 Haloacid dehalogenase-like hydrolase 50 199 3.1E-12 T 28-03-2018 IPR023214 HAD-like domain APY29_RS02280 a2932c3337283453434ca1d0e0887bdc 245 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 142 158 1.9E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS02280 a2932c3337283453434ca1d0e0887bdc 245 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 188 201 1.9E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS02280 a2932c3337283453434ca1d0e0887bdc 245 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 1.9E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS02280 a2932c3337283453434ca1d0e0887bdc 245 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 88 193 3.3E-13 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS00750 482c6806e61e341d80b8b9460475801b 157 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 13 133 2.9E-6 T 28-03-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 APY29_RS00750 482c6806e61e341d80b8b9460475801b 157 SUPERFAMILY SSF55961 4 143 4.4E-19 T 28-03-2018 APY29_RS00750 482c6806e61e341d80b8b9460475801b 157 Gene3D G3DSA:3.30.530.20 2 152 8.1E-21 T 28-03-2018 IPR023393 START-like domain APY29_RS02455 007581ac7ffd8505de1e9ef6303e1891 661 Gene3D G3DSA:3.20.20.80 180 493 5.5E-104 T 28-03-2018 APY29_RS02455 007581ac7ffd8505de1e9ef6303e1891 661 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 36 177 2.1E-20 T 28-03-2018 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 APY29_RS02455 007581ac7ffd8505de1e9ef6303e1891 661 SUPERFAMILY SSF51445 180 509 8.11E-100 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS02455 007581ac7ffd8505de1e9ef6303e1891 661 Pfam PF07555 beta-N-acetylglucosaminidase 183 493 6.1E-103 T 28-03-2018 IPR011496 Beta-N-acetylglucosaminidase MetaCyc: PWY-7437 APY29_RS02455 007581ac7ffd8505de1e9ef6303e1891 661 Gene3D G3DSA:1.20.58.460 494 658 1.7E-32 T 28-03-2018 APY29_RS02455 007581ac7ffd8505de1e9ef6303e1891 661 Gene3D G3DSA:3.30.379.10 25 177 2.3E-19 T 28-03-2018 APY29_RS02455 007581ac7ffd8505de1e9ef6303e1891 661 SUPERFAMILY SSF55545 33 178 1.23E-22 T 28-03-2018 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 APY29_RS16175 c2c43eff14fca28d9cd21d1d2627bc6f 525 SUPERFAMILY SSF50494 51 303 1.06E-64 T 28-03-2018 IPR009003 Peptidase S1, PA clan APY29_RS16175 c2c43eff14fca28d9cd21d1d2627bc6f 525 SUPERFAMILY SSF50156 432 522 7.03E-7 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS16175 c2c43eff14fca28d9cd21d1d2627bc6f 525 Gene3D G3DSA:2.40.10.10 51 203 3.4E-39 T 28-03-2018 APY29_RS16175 c2c43eff14fca28d9cd21d1d2627bc6f 525 Pfam PF13180 PDZ domain 313 403 2.6E-17 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS16175 c2c43eff14fca28d9cd21d1d2627bc6f 525 Gene3D G3DSA:2.30.42.10 307 415 2.3E-26 T 28-03-2018 APY29_RS16175 c2c43eff14fca28d9cd21d1d2627bc6f 525 Gene3D G3DSA:2.40.10.10 204 302 1.1E-38 T 28-03-2018 APY29_RS16175 c2c43eff14fca28d9cd21d1d2627bc6f 525 Gene3D G3DSA:2.30.42.10 430 524 4.9E-10 T 28-03-2018 APY29_RS16175 c2c43eff14fca28d9cd21d1d2627bc6f 525 SUPERFAMILY SSF50156 270 395 1.31E-23 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS16175 c2c43eff14fca28d9cd21d1d2627bc6f 525 SMART SM00228 312 394 5.7E-12 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS16175 c2c43eff14fca28d9cd21d1d2627bc6f 525 SMART SM00228 431 514 8.7 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS16175 c2c43eff14fca28d9cd21d1d2627bc6f 525 PRINTS PR00834 HtrA/DegQ protease family signature 266 283 2.4E-50 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APY29_RS16175 c2c43eff14fca28d9cd21d1d2627bc6f 525 PRINTS PR00834 HtrA/DegQ protease family signature 352 364 2.4E-50 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APY29_RS16175 c2c43eff14fca28d9cd21d1d2627bc6f 525 PRINTS PR00834 HtrA/DegQ protease family signature 244 261 2.4E-50 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APY29_RS16175 c2c43eff14fca28d9cd21d1d2627bc6f 525 PRINTS PR00834 HtrA/DegQ protease family signature 208 232 2.4E-50 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APY29_RS16175 c2c43eff14fca28d9cd21d1d2627bc6f 525 PRINTS PR00834 HtrA/DegQ protease family signature 147 159 2.4E-50 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APY29_RS16175 c2c43eff14fca28d9cd21d1d2627bc6f 525 PRINTS PR00834 HtrA/DegQ protease family signature 168 188 2.4E-50 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APY29_RS16175 c2c43eff14fca28d9cd21d1d2627bc6f 525 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 53 520 2.5E-149 T 28-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 APY29_RS16175 c2c43eff14fca28d9cd21d1d2627bc6f 525 Pfam PF13365 Trypsin-like peptidase domain 138 273 9.8E-38 T 28-03-2018 APY29_RS12545 4ea0810d0bb5c7ceebf7164c8a263058 457 SUPERFAMILY SSF52540 22 242 1.93E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS12545 4ea0810d0bb5c7ceebf7164c8a263058 457 SUPERFAMILY SSF48019 258 440 3.61E-69 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 APY29_RS12545 4ea0810d0bb5c7ceebf7164c8a263058 457 Pfam PF12002 MgsA AAA+ ATPase C terminal 275 440 1.4E-62 T 28-03-2018 IPR021886 MgsA AAA+ ATPase C-terminal APY29_RS12545 4ea0810d0bb5c7ceebf7164c8a263058 457 Pfam PF16193 AAA C-terminal domain 197 273 1.0E-21 T 28-03-2018 IPR032423 AAA C-terminal domain APY29_RS12545 4ea0810d0bb5c7ceebf7164c8a263058 457 Gene3D G3DSA:1.10.3710.10 354 455 1.6E-32 T 28-03-2018 APY29_RS12545 4ea0810d0bb5c7ceebf7164c8a263058 457 SMART SM00382 58 174 1.4E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS12545 4ea0810d0bb5c7ceebf7164c8a263058 457 Gene3D G3DSA:1.10.8.60 163 249 9.7E-21 T 28-03-2018 APY29_RS12545 4ea0810d0bb5c7ceebf7164c8a263058 457 Gene3D G3DSA:1.20.272.10 258 352 1.9E-36 T 28-03-2018 APY29_RS12545 4ea0810d0bb5c7ceebf7164c8a263058 457 Gene3D G3DSA:3.40.50.300 15 162 2.2E-28 T 28-03-2018 APY29_RS12545 4ea0810d0bb5c7ceebf7164c8a263058 457 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 62 170 2.3E-14 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APY29_RS01985 88092786fa7ce628a690c49c2181ecee 304 Gene3D G3DSA:1.10.10.10 1 89 7.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS01985 88092786fa7ce628a690c49c2181ecee 304 Gene3D G3DSA:3.40.190.10 180 260 2.5E-11 T 28-03-2018 APY29_RS01985 88092786fa7ce628a690c49c2181ecee 304 Pfam PF03466 LysR substrate binding domain 92 289 1.4E-28 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS01985 88092786fa7ce628a690c49c2181ecee 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.3E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS01985 88092786fa7ce628a690c49c2181ecee 304 SUPERFAMILY SSF46785 5 115 5.56E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS01985 88092786fa7ce628a690c49c2181ecee 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS01985 88092786fa7ce628a690c49c2181ecee 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS01985 88092786fa7ce628a690c49c2181ecee 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS01985 88092786fa7ce628a690c49c2181ecee 304 Gene3D G3DSA:3.40.190.10 95 179 1.5E-18 T 28-03-2018 APY29_RS01985 88092786fa7ce628a690c49c2181ecee 304 SUPERFAMILY SSF53850 93 293 5.43E-33 T 28-03-2018 APY29_RS04910 6f6951c630d9f23f3485cb54c30bdb96 65 Gene3D G3DSA:2.60.260.40 9 64 6.1E-17 T 28-03-2018 APY29_RS04910 6f6951c630d9f23f3485cb54c30bdb96 65 Pfam PF10276 Zinc-finger domain 25 61 3.6E-8 T 28-03-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS14795 3d0c95e62506f8832d052b531a4a0b80 258 SUPERFAMILY SSF111331 28 245 1.96E-55 T 28-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain APY29_RS14795 3d0c95e62506f8832d052b531a4a0b80 258 Hamap MF_00361 NAD kinase [nadK]. 5 257 21.632 T 28-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 APY29_RS14795 3d0c95e62506f8832d052b531a4a0b80 258 Gene3D G3DSA:3.40.50.10330 8 114 6.0E-18 T 28-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 APY29_RS14795 3d0c95e62506f8832d052b531a4a0b80 258 Pfam PF01513 ATP-NAD kinase 18 220 4.7E-17 T 28-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 APY29_RS14795 3d0c95e62506f8832d052b531a4a0b80 258 Gene3D G3DSA:2.60.200.30 115 233 1.0E-22 T 28-03-2018 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 APY29_RS21275 8d7114f535540f85b30157faacb8e09a 450 SUPERFAMILY SSF48557 7 444 3.61E-114 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 APY29_RS21275 8d7114f535540f85b30157faacb8e09a 450 PRINTS PR00149 Fumarate lyase superfamily signature 102 120 4.6E-22 T 28-03-2018 IPR000362 Fumarate lyase family APY29_RS21275 8d7114f535540f85b30157faacb8e09a 450 PRINTS PR00149 Fumarate lyase superfamily signature 147 165 4.6E-22 T 28-03-2018 IPR000362 Fumarate lyase family APY29_RS21275 8d7114f535540f85b30157faacb8e09a 450 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 4.6E-22 T 28-03-2018 IPR000362 Fumarate lyase family APY29_RS21275 8d7114f535540f85b30157faacb8e09a 450 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 4.6E-22 T 28-03-2018 IPR000362 Fumarate lyase family APY29_RS21275 8d7114f535540f85b30157faacb8e09a 450 Gene3D G3DSA:1.10.275.10 1 104 5.2E-19 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal APY29_RS21275 8d7114f535540f85b30157faacb8e09a 450 Gene3D G3DSA:1.20.200.10 105 373 2.0E-79 T 28-03-2018 APY29_RS21275 8d7114f535540f85b30157faacb8e09a 450 SMART SM00998 365 444 7.0E-24 T 28-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APY29_RS21275 8d7114f535540f85b30157faacb8e09a 450 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 5.3E-9 T 28-03-2018 APY29_RS21275 8d7114f535540f85b30157faacb8e09a 450 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 5.3E-9 T 28-03-2018 APY29_RS21275 8d7114f535540f85b30157faacb8e09a 450 PRINTS PR00145 Argininosuccinate lyase family signature 101 123 5.3E-9 T 28-03-2018 APY29_RS21275 8d7114f535540f85b30157faacb8e09a 450 PRINTS PR00145 Argininosuccinate lyase family signature 142 162 5.3E-9 T 28-03-2018 APY29_RS21275 8d7114f535540f85b30157faacb8e09a 450 Pfam PF00206 Lyase 21 302 3.7E-53 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal APY29_RS21275 8d7114f535540f85b30157faacb8e09a 450 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 7 350 8.0E-143 T 28-03-2018 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 APY29_RS21275 8d7114f535540f85b30157faacb8e09a 450 Gene3D G3DSA:1.10.40.30 374 444 5.5E-18 T 28-03-2018 APY29_RS21275 8d7114f535540f85b30157faacb8e09a 450 Pfam PF10397 Adenylosuccinate lyase C-terminus 366 443 8.4E-14 T 28-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APY29_RS21275 8d7114f535540f85b30157faacb8e09a 450 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 APY29_RS14555 1ec9b3f74923aed6d223fc91c10c79b1 285 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 6 272 5.3E-131 T 28-03-2018 IPR010247 N-formylglutamate deformylase APY29_RS14555 1ec9b3f74923aed6d223fc91c10c79b1 285 Gene3D G3DSA:3.40.630.40 2 275 3.7E-75 T 28-03-2018 APY29_RS14555 1ec9b3f74923aed6d223fc91c10c79b1 285 SUPERFAMILY SSF53187 5 269 5.65E-79 T 28-03-2018 APY29_RS14555 1ec9b3f74923aed6d223fc91c10c79b1 285 Pfam PF05013 N-formylglutamate amidohydrolase 15 233 2.6E-67 T 28-03-2018 IPR007709 N-formylglutamate amidohydrolase APY29_RS18735 7301765b133c4bd8d5cd1e4daadc7031 212 Gene3D G3DSA:1.20.1440.20 13 192 1.4E-53 T 28-03-2018 APY29_RS18735 7301765b133c4bd8d5cd1e4daadc7031 212 Pfam PF04011 LemA family 8 192 7.4E-67 T 28-03-2018 IPR007156 LemA APY29_RS18735 7301765b133c4bd8d5cd1e4daadc7031 212 SUPERFAMILY SSF140478 26 179 3.53E-54 T 28-03-2018 IPR023353 LemA-like domain APY29_RS00485 d06faebe6593a85d160ee87867038330 487 Gene3D G3DSA:3.30.420.10 295 485 7.0E-18 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS00485 d06faebe6593a85d160ee87867038330 487 Pfam PF13482 RNase_H superfamily 296 470 2.2E-39 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS00485 d06faebe6593a85d160ee87867038330 487 SUPERFAMILY SSF53098 291 471 6.4E-23 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS14850 a900fea8ad65c520f4c5faff00c13e9b 232 SUPERFAMILY SSF54534 27 232 1.73E-33 T 28-03-2018 APY29_RS14850 a900fea8ad65c520f4c5faff00c13e9b 232 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 181 229 3.5E-7 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain APY29_RS14850 a900fea8ad65c520f4c5faff00c13e9b 232 Gene3D G3DSA:1.10.287.460 19 116 5.8E-23 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 APY29_RS14850 a900fea8ad65c520f4c5faff00c13e9b 232 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 18 135 6.0E-28 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 APY29_RS14850 a900fea8ad65c520f4c5faff00c13e9b 232 Gene3D G3DSA:3.10.50.40 117 232 8.4E-16 T 28-03-2018 APY29_RS22445 3847bf20775c854e8d28df67249da3e2 382 Gene3D G3DSA:3.20.20.100 53 369 1.9E-53 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS22445 3847bf20775c854e8d28df67249da3e2 382 Pfam PF00248 Aldo/keto reductase family 61 367 2.6E-43 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS22445 3847bf20775c854e8d28df67249da3e2 382 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 27 8.5E-5 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APY29_RS22445 3847bf20775c854e8d28df67249da3e2 382 SUPERFAMILY SSF51430 58 368 6.55E-56 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS07225 80ea96e80c30a6fad69ef6e284ae0021 409 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 64 405 7.0E-45 T 28-03-2018 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 APY29_RS07225 80ea96e80c30a6fad69ef6e284ae0021 409 SUPERFAMILY SSF51556 28 408 5.78E-50 T 28-03-2018 IPR032466 Metal-dependent hydrolase APY29_RS07225 80ea96e80c30a6fad69ef6e284ae0021 409 Gene3D G3DSA:3.20.20.140 17 325 1.2E-50 T 28-03-2018 APY29_RS07225 80ea96e80c30a6fad69ef6e284ae0021 409 Gene3D G3DSA:3.20.20.140 331 409 1.9E-13 T 28-03-2018 APY29_RS01110 0e1a240933c2e290aa3630212f41550e 249 Pfam PF01614 Bacterial transcriptional regulator 131 245 2.1E-8 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal APY29_RS01110 0e1a240933c2e290aa3630212f41550e 249 SUPERFAMILY SSF46785 12 79 3.11E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS01110 0e1a240933c2e290aa3630212f41550e 249 SMART SM00346 10 99 2.3E-19 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APY29_RS01110 0e1a240933c2e290aa3630212f41550e 249 SUPERFAMILY SSF55781 74 248 1.96E-30 T 28-03-2018 IPR029016 GAF domain-like APY29_RS01110 0e1a240933c2e290aa3630212f41550e 249 Pfam PF09339 IclR helix-turn-helix domain 12 63 5.5E-15 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APY29_RS01110 0e1a240933c2e290aa3630212f41550e 249 Gene3D G3DSA:1.10.10.10 4 78 3.7E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS01110 0e1a240933c2e290aa3630212f41550e 249 Gene3D G3DSA:3.30.450.40 79 249 1.9E-31 T 28-03-2018 IPR029016 GAF domain-like APY29_RS18630 565e5cdea0f9e7cc57d857389979d446 549 Gene3D G3DSA:3.40.50.300 281 549 1.4E-67 T 28-03-2018 APY29_RS18630 565e5cdea0f9e7cc57d857389979d446 549 Gene3D G3DSA:3.40.50.300 2 278 6.3E-59 T 28-03-2018 APY29_RS18630 565e5cdea0f9e7cc57d857389979d446 549 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 267 6.4E-6 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APY29_RS18630 565e5cdea0f9e7cc57d857389979d446 549 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 513 544 4.0E-4 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APY29_RS18630 565e5cdea0f9e7cc57d857389979d446 549 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS18630 565e5cdea0f9e7cc57d857389979d446 549 SUPERFAMILY SSF52540 5 255 1.98E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS18630 565e5cdea0f9e7cc57d857389979d446 549 Pfam PF00005 ABC transporter 27 184 1.3E-18 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS18630 565e5cdea0f9e7cc57d857389979d446 549 Pfam PF00005 ABC transporter 306 460 5.5E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS18630 565e5cdea0f9e7cc57d857389979d446 549 SUPERFAMILY SSF52540 284 532 4.2E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS18630 565e5cdea0f9e7cc57d857389979d446 549 SMART SM00382 35 233 4.5E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS18630 565e5cdea0f9e7cc57d857389979d446 549 SMART SM00382 314 518 2.8E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS06660 8074889974e4d537f9ff208ea74cb02b 109 Pfam PF11747 Killing trait 11 77 6.2E-27 T 28-03-2018 IPR021070 Killing trait, RebB APY29_RS03720 56c5ee93ccf7a96c6790433b62e1560f 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 4.0E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS03720 56c5ee93ccf7a96c6790433b62e1560f 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 4.0E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS03720 56c5ee93ccf7a96c6790433b62e1560f 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 4.0E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS03720 56c5ee93ccf7a96c6790433b62e1560f 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 71 190 3.6E-16 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS03720 56c5ee93ccf7a96c6790433b62e1560f 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 190 1.3E-26 T 28-03-2018 IPR023214 HAD-like domain APY29_RS03720 56c5ee93ccf7a96c6790433b62e1560f 226 SUPERFAMILY SSF56784 10 221 1.6E-48 T 28-03-2018 IPR023214 HAD-like domain APY29_RS03720 56c5ee93ccf7a96c6790433b62e1560f 226 Gene3D G3DSA:3.40.50.1000 1 215 5.5E-34 T 28-03-2018 IPR023214 HAD-like domain APY29_RS13105 0bb838d004e79f20cca5c88d51fe013e 725 SMART SM01049 43 138 1.1E-30 T 28-03-2018 IPR033480 Single Cache domain 2 APY29_RS13105 0bb838d004e79f20cca5c88d51fe013e 725 Pfam PF17200 Single Cache domain 2 46 193 2.2E-41 T 28-03-2018 IPR033480 Single Cache domain 2 APY29_RS13105 0bb838d004e79f20cca5c88d51fe013e 725 SMART SM00304 400 452 32.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13105 0bb838d004e79f20cca5c88d51fe013e 725 SMART SM00304 220 272 2.0E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13105 0bb838d004e79f20cca5c88d51fe013e 725 SUPERFAMILY SSF158472 221 269 3.14E-7 T 28-03-2018 APY29_RS13105 0bb838d004e79f20cca5c88d51fe013e 725 Gene3D G3DSA:3.30.450.20 40 194 7.9E-46 T 28-03-2018 APY29_RS13105 0bb838d004e79f20cca5c88d51fe013e 725 SUPERFAMILY SSF58104 420 703 3.92E-72 T 28-03-2018 APY29_RS13105 0bb838d004e79f20cca5c88d51fe013e 725 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 628 657 1.8E-57 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13105 0bb838d004e79f20cca5c88d51fe013e 725 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 551 578 1.8E-57 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13105 0bb838d004e79f20cca5c88d51fe013e 725 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 580 609 1.8E-57 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13105 0bb838d004e79f20cca5c88d51fe013e 725 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 474 503 1.8E-57 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13105 0bb838d004e79f20cca5c88d51fe013e 725 SMART SM00283 453 700 7.6E-90 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS13105 0bb838d004e79f20cca5c88d51fe013e 725 Gene3D G3DSA:1.10.287.950 226 509 8.0E-22 T 28-03-2018 APY29_RS13105 0bb838d004e79f20cca5c88d51fe013e 725 Gene3D G3DSA:1.10.287.950 510 704 2.0E-48 T 28-03-2018 APY29_RS13105 0bb838d004e79f20cca5c88d51fe013e 725 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 513 666 3.4E-54 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS02755 0e04c988df760c1eadc415832b9dbe3e 723 Gene3D G3DSA:3.20.20.300 1 356 9.5E-101 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS02755 0e04c988df760c1eadc415832b9dbe3e 723 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 253 270 - T 28-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 APY29_RS02755 0e04c988df760c1eadc415832b9dbe3e 723 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 372 604 3.2E-52 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APY29_RS02755 0e04c988df760c1eadc415832b9dbe3e 723 PRINTS PR00133 Glycosyl hydrolase family 3 signature 253 271 2.8E-18 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS02755 0e04c988df760c1eadc415832b9dbe3e 723 PRINTS PR00133 Glycosyl hydrolase family 3 signature 81 97 2.8E-18 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS02755 0e04c988df760c1eadc415832b9dbe3e 723 PRINTS PR00133 Glycosyl hydrolase family 3 signature 100 119 2.8E-18 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS02755 0e04c988df760c1eadc415832b9dbe3e 723 PRINTS PR00133 Glycosyl hydrolase family 3 signature 146 162 2.8E-18 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS02755 0e04c988df760c1eadc415832b9dbe3e 723 PRINTS PR00133 Glycosyl hydrolase family 3 signature 183 199 2.8E-18 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS02755 0e04c988df760c1eadc415832b9dbe3e 723 SUPERFAMILY SSF52279 372 607 5.62E-52 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APY29_RS02755 0e04c988df760c1eadc415832b9dbe3e 723 SMART SM01217 641 710 2.2E-30 T 28-03-2018 IPR026891 Fibronectin type III-like domain APY29_RS02755 0e04c988df760c1eadc415832b9dbe3e 723 Gene3D G3DSA:3.40.50.1700 357 604 1.2E-72 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APY29_RS02755 0e04c988df760c1eadc415832b9dbe3e 723 Pfam PF14310 Fibronectin type III-like domain 641 709 4.5E-20 T 28-03-2018 IPR026891 Fibronectin type III-like domain APY29_RS02755 0e04c988df760c1eadc415832b9dbe3e 723 Gene3D G3DSA:2.60.40.10 605 720 1.7E-29 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS02755 0e04c988df760c1eadc415832b9dbe3e 723 SUPERFAMILY SSF51445 3 371 4.42E-99 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS02755 0e04c988df760c1eadc415832b9dbe3e 723 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 14 332 1.5E-69 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS19385 3b50be6069e02d5b2055e2857b121776 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 56.501 T 28-03-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 APY29_RS19385 3b50be6069e02d5b2055e2857b121776 490 SUPERFAMILY SSF53720 9 482 2.88E-173 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APY29_RS19385 3b50be6069e02d5b2055e2857b121776 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 2.6E-215 T 28-03-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 APY29_RS19385 3b50be6069e02d5b2055e2857b121776 490 Gene3D G3DSA:3.40.605.10 2 267 3.5E-107 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APY29_RS19385 3b50be6069e02d5b2055e2857b121776 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APY29_RS19385 3b50be6069e02d5b2055e2857b121776 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APY29_RS19385 3b50be6069e02d5b2055e2857b121776 490 Pfam PF00171 Aldehyde dehydrogenase family 18 479 2.6E-178 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APY29_RS19385 3b50be6069e02d5b2055e2857b121776 490 Gene3D G3DSA:3.40.309.10 268 465 5.4E-72 T 28-03-2018 APY29_RS00430 25e27aa33224d4395ccc1cf892fa9f3a 128 PIRSF PIRSF019455 1 128 9.1E-26 T 28-03-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 APY29_RS00430 25e27aa33224d4395ccc1cf892fa9f3a 128 Pfam PF03965 Penicillinase repressor 6 119 3.6E-28 T 28-03-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 APY29_RS00430 25e27aa33224d4395ccc1cf892fa9f3a 128 Gene3D G3DSA:1.10.4040.10 73 120 1.8E-9 T 28-03-2018 APY29_RS00430 25e27aa33224d4395ccc1cf892fa9f3a 128 Gene3D G3DSA:1.10.10.10 1 70 6.7E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS00430 25e27aa33224d4395ccc1cf892fa9f3a 128 SUPERFAMILY SSF46785 4 121 6.64E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS09475 cf8089ac0e5a29f4938216c75726c444 901 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 671 751 1.7E-16 T 28-03-2018 IPR022385 Rhs repeat-associated core GO:0097264 APY29_RS09475 cf8089ac0e5a29f4938216c75726c444 901 Pfam PF05593 RHS Repeat 43 72 3.0E-7 T 28-03-2018 IPR031325 RHS repeat APY29_RS09475 cf8089ac0e5a29f4938216c75726c444 901 Pfam PF05593 RHS Repeat 460 497 3.9E-6 T 28-03-2018 IPR031325 RHS repeat APY29_RS09475 cf8089ac0e5a29f4938216c75726c444 901 Pfam PF05593 RHS Repeat 248 285 1.5E-7 T 28-03-2018 IPR031325 RHS repeat APY29_RS09475 cf8089ac0e5a29f4938216c75726c444 901 Pfam PF05593 RHS Repeat 203 241 2.5E-5 T 28-03-2018 IPR031325 RHS repeat APY29_RS09475 cf8089ac0e5a29f4938216c75726c444 901 Pfam PF05593 RHS Repeat 227 263 4.1E-8 T 28-03-2018 IPR031325 RHS repeat APY29_RS09475 cf8089ac0e5a29f4938216c75726c444 901 Pfam PF05593 RHS Repeat 93 128 7.1E-7 T 28-03-2018 IPR031325 RHS repeat APY29_RS09475 cf8089ac0e5a29f4938216c75726c444 901 Pfam PF05593 RHS Repeat 269 304 8.2E-10 T 28-03-2018 IPR031325 RHS repeat APY29_RS09475 cf8089ac0e5a29f4938216c75726c444 901 Gene3D G3DSA:3.40.390.10 707 896 7.8E-4 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APY29_RS09475 cf8089ac0e5a29f4938216c75726c444 901 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 101 134 1.5E-8 T 28-03-2018 IPR006530 YD repeat APY29_RS09475 cf8089ac0e5a29f4938216c75726c444 901 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 227 268 5.3E-8 T 28-03-2018 IPR006530 YD repeat APY29_RS09475 cf8089ac0e5a29f4938216c75726c444 901 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 248 288 8.9E-9 T 28-03-2018 IPR006530 YD repeat APY29_RS09475 cf8089ac0e5a29f4938216c75726c444 901 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 269 300 4.2E-4 T 28-03-2018 IPR006530 YD repeat APY29_RS09475 cf8089ac0e5a29f4938216c75726c444 901 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 43 72 1.3E-4 T 28-03-2018 IPR006530 YD repeat APY29_RS03465 aa339dc11222cd76fccb916d84032f97 299 SUPERFAMILY SSF47240 1 285 8.31E-85 T 28-03-2018 IPR009078 Ferritin-like superfamily APY29_RS03465 aa339dc11222cd76fccb916d84032f97 299 Gene3D G3DSA:1.20.1260.10 1 198 1.7E-66 T 28-03-2018 IPR012347 Ferritin-related APY29_RS03465 aa339dc11222cd76fccb916d84032f97 299 Pfam PF05067 Manganese containing catalase 1 286 3.0E-84 T 28-03-2018 IPR007760 Manganese catalase APY29_RS21105 f5ca37d349ed8136298539cd516cfaeb 317 Gene3D G3DSA:2.30.330.10 231 313 9.5E-15 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) APY29_RS21105 f5ca37d349ed8136298539cd516cfaeb 317 Gene3D G3DSA:2.30.330.10 142 212 9.5E-4 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) APY29_RS21105 f5ca37d349ed8136298539cd516cfaeb 317 SUPERFAMILY SSF101801 238 312 3.14E-13 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) APY29_RS21105 f5ca37d349ed8136298539cd516cfaeb 317 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 240 309 2.2E-12 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) APY29_RS21105 f5ca37d349ed8136298539cd516cfaeb 317 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 36 309 6.2E-53 T 28-03-2018 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 APY29_RS08785 c32864576d3709ae3eff0e54ce64b399 219 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 20 167 5.7E-36 T 28-03-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS18150 87c587e083d30599968c1c180aac4240 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 4.1E-155 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 APY29_RS18150 87c587e083d30599968c1c180aac4240 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 5.0E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS18150 87c587e083d30599968c1c180aac4240 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 5.0E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS18150 87c587e083d30599968c1c180aac4240 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 5.0E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS18150 87c587e083d30599968c1c180aac4240 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.0E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS18150 87c587e083d30599968c1c180aac4240 363 SUPERFAMILY SSF52540 3 301 1.58E-82 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS18150 87c587e083d30599968c1c180aac4240 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 44.202 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 APY29_RS18150 87c587e083d30599968c1c180aac4240 363 PIRSF PIRSF006641 1 363 6.5E-153 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 APY29_RS18150 87c587e083d30599968c1c180aac4240 363 Gene3D G3DSA:3.10.20.30 263 362 3.7E-43 T 28-03-2018 IPR012675 Beta-grasp domain APY29_RS18150 87c587e083d30599968c1c180aac4240 363 Gene3D G3DSA:3.40.50.300 1 79 2.3E-7 T 28-03-2018 APY29_RS18150 87c587e083d30599968c1c180aac4240 363 Pfam PF01926 50S ribosome-binding GTPase 5 128 2.8E-22 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS18150 87c587e083d30599968c1c180aac4240 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 3.3E-37 T 28-03-2018 IPR013029 Domain of unknown function DUF933 Reactome: R-HSA-114608 APY29_RS18150 87c587e083d30599968c1c180aac4240 363 Gene3D G3DSA:1.10.150.300 110 200 2.6E-26 T 28-03-2018 IPR023192 TGS-like domain Reactome: R-HSA-114608 APY29_RS18150 87c587e083d30599968c1c180aac4240 363 SUPERFAMILY SSF81271 279 360 2.11E-34 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APY29_RS22035 323bca430f25d7bb42420637312c8ab0 553 SUPERFAMILY SSF56801 7 544 2.88E-87 T 28-03-2018 APY29_RS22035 323bca430f25d7bb42420637312c8ab0 553 ProSitePatterns PS00455 Putative AMP-binding domain signature. 178 189 - T 28-03-2018 IPR020845 AMP-binding, conserved site APY29_RS22035 323bca430f25d7bb42420637312c8ab0 553 Pfam PF00501 AMP-binding enzyme 15 444 7.4E-64 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APY29_RS22035 323bca430f25d7bb42420637312c8ab0 553 Gene3D G3DSA:3.40.50.980 183 334 6.5E-31 T 28-03-2018 APY29_RS22035 323bca430f25d7bb42420637312c8ab0 553 Gene3D G3DSA:2.30.38.10 335 439 3.5E-14 T 28-03-2018 APY29_RS22035 323bca430f25d7bb42420637312c8ab0 553 Gene3D G3DSA:3.40.50.980 5 182 1.1E-36 T 28-03-2018 APY29_RS22035 323bca430f25d7bb42420637312c8ab0 553 Gene3D G3DSA:3.30.300.30 444 553 5.8E-5 T 28-03-2018 APY29_RS02370 5ff1f8808b0bf6218b99a6054c27f0e7 289 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 83 113 - T 28-03-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 APY29_RS02370 5ff1f8808b0bf6218b99a6054c27f0e7 289 SUPERFAMILY SSF53474 7 238 8.24E-39 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS02370 5ff1f8808b0bf6218b99a6054c27f0e7 289 Pfam PF00326 Prolyl oligopeptidase family 51 239 2.1E-12 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APY29_RS02370 5ff1f8808b0bf6218b99a6054c27f0e7 289 Gene3D G3DSA:3.40.50.1820 28 243 2.5E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS03580 c53e661752baa94b98591d6c4b73f9ff 478 SMART SM00986 304 464 8.5E-36 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 APY29_RS03580 c53e661752baa94b98591d6c4b73f9ff 478 SMART SM00987 304 464 8.5E-36 T 28-03-2018 APY29_RS03580 c53e661752baa94b98591d6c4b73f9ff 478 Pfam PF03167 Uracil DNA glycosylase superfamily 304 453 3.4E-36 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 APY29_RS03580 c53e661752baa94b98591d6c4b73f9ff 478 Gene3D G3DSA:3.40.470.10 274 469 1.6E-57 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 APY29_RS03580 c53e661752baa94b98591d6c4b73f9ff 478 TIGRFAM TIGR03914 UDG_fam_dom: uracil-DNA glycosylase family domain 238 465 2.4E-97 T 28-03-2018 IPR005273 Uracil-DNA glycosylase family 4 APY29_RS03580 c53e661752baa94b98591d6c4b73f9ff 478 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 290 451 2.8E-38 T 28-03-2018 IPR005273 Uracil-DNA glycosylase family 4 APY29_RS03580 c53e661752baa94b98591d6c4b73f9ff 478 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 11 236 5.0E-66 T 28-03-2018 IPR023875 DNA metabolism protein, putative APY29_RS03580 c53e661752baa94b98591d6c4b73f9ff 478 SUPERFAMILY SSF52141 278 454 1.99E-53 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 APY29_RS03580 c53e661752baa94b98591d6c4b73f9ff 478 Pfam PF13566 Domain of unknown function (DUF4130 77 235 3.2E-43 T 28-03-2018 IPR025404 Domain of unknown function DUF4130 APY29_RS00420 052e13894fed3b42654c35abbc6d5eb9 181 Pfam PF07484 Phage Tail Collar Domain 9 65 1.8E-25 T 28-03-2018 IPR011083 Phage tail collar domain APY29_RS00420 052e13894fed3b42654c35abbc6d5eb9 181 Gene3D G3DSA:3.90.1340.10 1 56 7.7E-22 T 28-03-2018 IPR011083 Phage tail collar domain APY29_RS00420 052e13894fed3b42654c35abbc6d5eb9 181 Gene3D G3DSA:4.10.1070.10 57 165 8.5E-4 T 28-03-2018 APY29_RS00420 052e13894fed3b42654c35abbc6d5eb9 181 SUPERFAMILY SSF88874 5 173 6.41E-45 T 28-03-2018 APY29_RS02780 46dd9263d26c325e475ecb8698ac906d 438 PIRSF PIRSF006060 1 437 2.4E-72 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APY29_RS02780 46dd9263d26c325e475ecb8698ac906d 438 Pfam PF13520 Amino acid permease 18 406 1.4E-48 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APY29_RS19115 88afbe4c156e716e2542ecfa53415889 576 Gene3D G3DSA:3.40.50.2300 391 558 5.7E-10 T 28-03-2018 APY29_RS19115 88afbe4c156e716e2542ecfa53415889 576 Gene3D G3DSA:3.40.50.2300 250 390 1.4E-15 T 28-03-2018 APY29_RS19115 88afbe4c156e716e2542ecfa53415889 576 SUPERFAMILY SSF53822 250 572 7.07E-62 T 28-03-2018 IPR028082 Periplasmic binding protein-like I APY29_RS19115 88afbe4c156e716e2542ecfa53415889 576 Pfam PF04348 LppC putative lipoprotein 43 567 3.3E-118 T 28-03-2018 IPR007443 Penicillin-binding protein activator LpoA APY29_RS09770 7626d0f337fed0875c6c28402937565f 251 Gene3D G3DSA:3.40.50.880 14 251 1.8E-36 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS09770 7626d0f337fed0875c6c28402937565f 251 SUPERFAMILY SSF52317 12 245 7.86E-38 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS09770 7626d0f337fed0875c6c28402937565f 251 Pfam PF07722 Peptidase C26 5 222 4.7E-69 T 28-03-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 APY29_RS19690 93493c51c161ec553db1468db6082e5a 686 Pfam PF00905 Penicillin binding protein transpeptidase domain 266 604 5.7E-64 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APY29_RS19690 93493c51c161ec553db1468db6082e5a 686 SUPERFAMILY SSF56519 57 248 1.83E-46 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APY29_RS19690 93493c51c161ec553db1468db6082e5a 686 Gene3D G3DSA:3.90.1310.10 34 244 1.3E-48 T 28-03-2018 APY29_RS19690 93493c51c161ec553db1468db6082e5a 686 SUPERFAMILY SSF56601 250 607 8.25E-92 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like APY29_RS19690 93493c51c161ec553db1468db6082e5a 686 Gene3D G3DSA:3.40.710.10 245 612 2.0E-82 T 28-03-2018 APY29_RS19690 93493c51c161ec553db1468db6082e5a 686 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 607 6.3E-206 T 28-03-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0016020 APY29_RS19690 93493c51c161ec553db1468db6082e5a 686 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 233 1.2E-40 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APY29_RS14230 8df2ec8653adb876d0df4059768d71a2 316 Pfam PF00535 Glycosyl transferase family 2 17 130 2.3E-20 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 APY29_RS14230 8df2ec8653adb876d0df4059768d71a2 316 Gene3D G3DSA:3.90.550.10 7 275 4.2E-39 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS14230 8df2ec8653adb876d0df4059768d71a2 316 SUPERFAMILY SSF53448 16 287 4.85E-45 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS08440 f4cb23a6b0c41f0767854581f53fef03 135 Gene3D G3DSA:1.10.10.10 26 135 1.9E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS08440 f4cb23a6b0c41f0767854581f53fef03 135 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 33 111 1.5E-17 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 APY29_RS08440 f4cb23a6b0c41f0767854581f53fef03 135 SUPERFAMILY SSF46767 30 112 8.24E-19 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 APY29_RS17465 c7b461563463f1e9511228d5c28302ea 116 Pfam PF01230 HIT domain 11 107 1.1E-23 T 28-03-2018 IPR001310 Histidine triad (HIT) protein APY29_RS17465 c7b461563463f1e9511228d5c28302ea 116 SUPERFAMILY SSF54197 1 109 2.41E-34 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 APY29_RS17465 c7b461563463f1e9511228d5c28302ea 116 PRINTS PR00332 Histidine triad family signature 95 105 8.7E-20 T 28-03-2018 IPR001310 Histidine triad (HIT) protein APY29_RS17465 c7b461563463f1e9511228d5c28302ea 116 PRINTS PR00332 Histidine triad family signature 26 44 8.7E-20 T 28-03-2018 IPR001310 Histidine triad (HIT) protein APY29_RS17465 c7b461563463f1e9511228d5c28302ea 116 PRINTS PR00332 Histidine triad family signature 5 21 8.7E-20 T 28-03-2018 IPR001310 Histidine triad (HIT) protein APY29_RS17465 c7b461563463f1e9511228d5c28302ea 116 Gene3D G3DSA:3.30.428.10 1 114 7.9E-29 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 APY29_RS17465 c7b461563463f1e9511228d5c28302ea 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 28-03-2018 IPR019808 Histidine triad, conserved site APY29_RS14885 ef52caec60c24e3773c09f101800e316 416 Gene3D G3DSA:2.40.160.10 17 415 4.6E-46 T 28-03-2018 APY29_RS14885 ef52caec60c24e3773c09f101800e316 416 SUPERFAMILY SSF56935 31 413 3.4E-9 T 28-03-2018 APY29_RS14885 ef52caec60c24e3773c09f101800e316 416 Pfam PF07396 Phosphate-selective porin O and P 41 416 1.1E-98 T 28-03-2018 IPR010870 Phosphate-selective porin O/P APY29_RS00785 decc82cd995cb19d19aaa3b5da50ca86 156 Pfam PF00293 NUDIX domain 19 137 1.5E-19 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 APY29_RS00785 decc82cd995cb19d19aaa3b5da50ca86 156 Gene3D G3DSA:3.90.79.10 16 151 2.9E-30 T 28-03-2018 APY29_RS00785 decc82cd995cb19d19aaa3b5da50ca86 156 PRINTS PR00502 NUDIX hydrolase family signature 61 76 3.7E-6 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 APY29_RS00785 decc82cd995cb19d19aaa3b5da50ca86 156 PRINTS PR00502 NUDIX hydrolase family signature 47 61 3.7E-6 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 APY29_RS00785 decc82cd995cb19d19aaa3b5da50ca86 156 SUPERFAMILY SSF55811 15 150 2.03E-30 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 APY29_RS00785 decc82cd995cb19d19aaa3b5da50ca86 156 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APY29_RS11195 8298fd1381af467c299033ce5863ad9a 210 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 71 2.2E-16 T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APY29_RS11195 8298fd1381af467c299033ce5863ad9a 210 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 191 2.3E-52 T 28-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 APY29_RS11195 8298fd1381af467c299033ce5863ad9a 210 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APY29_RS11195 8298fd1381af467c299033ce5863ad9a 210 PIRSF PIRSF000847 1 200 1.1E-43 T 28-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 APY29_RS00515 3164c9a09b4623c2ab4fca48d579ff97 299 SUPERFAMILY SSF51735 3 220 2.6E-50 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS00515 3164c9a09b4623c2ab4fca48d579ff97 299 Pfam PF00106 short chain dehydrogenase 3 192 1.7E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS00515 3164c9a09b4623c2ab4fca48d579ff97 299 Gene3D G3DSA:3.40.50.720 1 296 1.9E-55 T 28-03-2018 APY29_RS00515 3164c9a09b4623c2ab4fca48d579ff97 299 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 190 0.0066 T 28-03-2018 APY29_RS00515 3164c9a09b4623c2ab4fca48d579ff97 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.8E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS00515 3164c9a09b4623c2ab4fca48d579ff97 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 5.8E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS00515 3164c9a09b4623c2ab4fca48d579ff97 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 5.8E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS00515 3164c9a09b4623c2ab4fca48d579ff97 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.8E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS00515 3164c9a09b4623c2ab4fca48d579ff97 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 5.8E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS00515 3164c9a09b4623c2ab4fca48d579ff97 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.8E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS07515 de5f2c7afbd8fb700b2e522f8fe6591c 113 Pfam PF12977 Domain of Unknown Function with PDB structure (DUF3861) 15 105 5.9E-23 T 28-03-2018 IPR024476 Protein of unknown function DUF3861 APY29_RS17975 3a9e2c34b39492b4ef4825d94694950f 119 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 4 119 1.7E-37 T 28-03-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS17975 3a9e2c34b39492b4ef4825d94694950f 119 SUPERFAMILY SSF53137 5 117 1.18E-48 T 28-03-2018 APY29_RS17975 3a9e2c34b39492b4ef4825d94694950f 119 Gene3D G3DSA:3.30.420.100 3 119 3.1E-34 T 28-03-2018 APY29_RS17975 3a9e2c34b39492b4ef4825d94694950f 119 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 5 119 1.9E-36 T 28-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS17975 3a9e2c34b39492b4ef4825d94694950f 119 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 4 119 25.762 T 28-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS04130 b13df6376eb518dce64949ba945fc9e3 395 Gene3D G3DSA:3.40.640.10 15 261 2.4E-63 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS04130 b13df6376eb518dce64949ba945fc9e3 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 18 393 1.2E-160 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 APY29_RS04130 b13df6376eb518dce64949ba945fc9e3 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 APY29_RS04130 b13df6376eb518dce64949ba945fc9e3 395 PIRSF PIRSF001434 3 395 8.0E-150 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 APY29_RS04130 b13df6376eb518dce64949ba945fc9e3 395 SUPERFAMILY SSF53383 20 394 2.99E-126 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS04130 b13df6376eb518dce64949ba945fc9e3 395 Gene3D G3DSA:3.90.1150.10 263 395 2.0E-56 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS14380 45608f27eb87eb2102bbfe6f46594c8e 156 Gene3D G3DSA:2.40.50.140 27 124 1.9E-31 T 28-03-2018 APY29_RS14380 45608f27eb87eb2102bbfe6f46594c8e 156 Pfam PF03100 CcmE 5 130 4.4E-44 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 APY29_RS14380 45608f27eb87eb2102bbfe6f46594c8e 156 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 140 30.852 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 APY29_RS14380 45608f27eb87eb2102bbfe6f46594c8e 156 SUPERFAMILY SSF82093 30 136 3.14E-36 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 APY29_RS11285 b14ce7c73587d73d367acc96cd16648d 81 Gene3D G3DSA:1.20.58.430 34 81 1.2E-9 T 28-03-2018 APY29_RS15555 4d44ba7dadb0453da6fa9c1e694a97d9 747 SMART SM00434 15 465 1.4E-218 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS15555 4d44ba7dadb0453da6fa9c1e694a97d9 747 SUPERFAMILY SSF56719 35 487 1.96E-150 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 APY29_RS15555 4d44ba7dadb0453da6fa9c1e694a97d9 747 Gene3D G3DSA:3.90.199.10 38 287 1.0E-96 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 APY29_RS15555 4d44ba7dadb0453da6fa9c1e694a97d9 747 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 472 4.0E-132 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS15555 4d44ba7dadb0453da6fa9c1e694a97d9 747 Gene3D G3DSA:1.10.268.10 348 487 2.0E-43 T 28-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APY29_RS15555 4d44ba7dadb0453da6fa9c1e694a97d9 747 Gene3D G3DSA:2.120.10.90 499 742 4.6E-39 T 28-03-2018 APY29_RS15555 4d44ba7dadb0453da6fa9c1e694a97d9 747 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 649 698 1.0E-5 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APY29_RS15555 4d44ba7dadb0453da6fa9c1e694a97d9 747 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 602 639 0.1 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APY29_RS15555 4d44ba7dadb0453da6fa9c1e694a97d9 747 SUPERFAMILY SSF101904 501 743 3.79E-46 T 28-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal APY29_RS15555 4d44ba7dadb0453da6fa9c1e694a97d9 747 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 13 743 0.0 T 28-03-2018 APY29_RS15555 4d44ba7dadb0453da6fa9c1e694a97d9 747 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 745 33.751 T 28-03-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APY29_RS19995 0fef30d23fddd0a89653ba941540e0d4 231 Pfam PF01987 Mitochondrial biogenesis AIM24 27 221 6.8E-33 T 28-03-2018 IPR002838 Mitochondrial biogenesis protein AIM24 APY29_RS19995 0fef30d23fddd0a89653ba941540e0d4 231 Gene3D G3DSA:3.60.160.10 19 230 2.0E-44 T 28-03-2018 IPR002838 Mitochondrial biogenesis protein AIM24 APY29_RS19995 0fef30d23fddd0a89653ba941540e0d4 231 SUPERFAMILY SSF51219 26 228 1.26E-51 T 28-03-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain APY29_RS01205 c63346086e5227081bcb7e4e44bc3860 575 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 182 207 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 APY29_RS01205 c63346086e5227081bcb7e4e44bc3860 575 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 67 492 1.3E-57 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APY29_RS01205 c63346086e5227081bcb7e4e44bc3860 575 Pfam PF00474 Sodium:solute symporter family 67 492 1.6E-106 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APY29_RS01550 3796c5b893e35f3766c57d871b6d600e 347 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 6 342 8.7E-98 T 28-03-2018 IPR017740 Type VI secretion system-associated, ImpA APY29_RS01550 3796c5b893e35f3766c57d871b6d600e 347 Pfam PF06812 ImpA, N-terminal, type VI secretion system 11 134 2.1E-34 T 28-03-2018 IPR010657 ImpA, N-terminal APY29_RS01570 d4938b9d99cfd5fd91ad04802f3e7da1 299 SUPERFAMILY SSF102886 5 297 2.75E-130 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APY29_RS01570 d4938b9d99cfd5fd91ad04802f3e7da1 299 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 164 188 - T 28-03-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APY29_RS01570 d4938b9d99cfd5fd91ad04802f3e7da1 299 Gene3D G3DSA:3.40.1500.10 1 298 1.8E-133 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APY29_RS01570 d4938b9d99cfd5fd91ad04802f3e7da1 299 PRINTS PR00073 Coprogen oxidase signature 160 189 4.0E-83 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APY29_RS01570 d4938b9d99cfd5fd91ad04802f3e7da1 299 PRINTS PR00073 Coprogen oxidase signature 29 45 4.0E-83 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APY29_RS01570 d4938b9d99cfd5fd91ad04802f3e7da1 299 PRINTS PR00073 Coprogen oxidase signature 259 285 4.0E-83 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APY29_RS01570 d4938b9d99cfd5fd91ad04802f3e7da1 299 PRINTS PR00073 Coprogen oxidase signature 123 145 4.0E-83 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APY29_RS01570 d4938b9d99cfd5fd91ad04802f3e7da1 299 PRINTS PR00073 Coprogen oxidase signature 88 112 4.0E-83 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APY29_RS01570 d4938b9d99cfd5fd91ad04802f3e7da1 299 PRINTS PR00073 Coprogen oxidase signature 231 258 4.0E-83 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APY29_RS01570 d4938b9d99cfd5fd91ad04802f3e7da1 299 PRINTS PR00073 Coprogen oxidase signature 46 67 4.0E-83 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APY29_RS01570 d4938b9d99cfd5fd91ad04802f3e7da1 299 Pfam PF01218 Coproporphyrinogen III oxidase 6 298 2.1E-129 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APY29_RS01570 d4938b9d99cfd5fd91ad04802f3e7da1 299 PIRSF PIRSF000166 2 299 1.5E-121 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APY29_RS01570 d4938b9d99cfd5fd91ad04802f3e7da1 299 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 1 274 57.113 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APY29_RS09245 bf0f7b440613456c8c94aece0a30e7ae 638 SUPERFAMILY SSF52518 320 507 3.47E-55 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold APY29_RS09245 bf0f7b440613456c8c94aece0a30e7ae 638 Gene3D G3DSA:3.40.50.970 301 491 4.1E-58 T 28-03-2018 APY29_RS09245 bf0f7b440613456c8c94aece0a30e7ae 638 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 9 623 45.031 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 APY29_RS09245 bf0f7b440613456c8c94aece0a30e7ae 638 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 10 285 2.3E-114 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 APY29_RS09245 bf0f7b440613456c8c94aece0a30e7ae 638 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 10 620 4.1E-256 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 APY29_RS09245 bf0f7b440613456c8c94aece0a30e7ae 638 SMART SM00861 322 486 6.1E-58 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain APY29_RS09245 bf0f7b440613456c8c94aece0a30e7ae 638 Pfam PF02779 Transketolase, pyrimidine binding domain 321 481 5.5E-36 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain APY29_RS09245 bf0f7b440613456c8c94aece0a30e7ae 638 SUPERFAMILY SSF52922 494 620 6.15E-27 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APY29_RS09245 bf0f7b440613456c8c94aece0a30e7ae 638 Pfam PF02780 Transketolase, C-terminal domain 498 614 6.2E-23 T 28-03-2018 IPR033248 Transketolase, C-terminal domain APY29_RS09245 bf0f7b440613456c8c94aece0a30e7ae 638 ProSitePatterns PS00802 Transketolase signature 2. 428 444 - T 28-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 APY29_RS09245 bf0f7b440613456c8c94aece0a30e7ae 638 SUPERFAMILY SSF52518 246 384 9.18E-73 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold APY29_RS09245 bf0f7b440613456c8c94aece0a30e7ae 638 SUPERFAMILY SSF52518 7 202 9.18E-73 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold APY29_RS09245 bf0f7b440613456c8c94aece0a30e7ae 638 ProSitePatterns PS00801 Transketolase signature 1. 35 54 - T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 APY29_RS09245 bf0f7b440613456c8c94aece0a30e7ae 638 Gene3D G3DSA:3.40.50.920 498 622 1.9E-29 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APY29_RS09245 bf0f7b440613456c8c94aece0a30e7ae 638 Gene3D G3DSA:3.40.50.970 1 300 1.8E-75 T 28-03-2018 APY29_RS10890 2e8710dddc7860026405564fb73acfe1 542 Pfam PF05977 Transmembrane secretion effector 11 527 1.3E-179 T 28-03-2018 IPR010290 Transmembrane secretion effector APY29_RS10890 2e8710dddc7860026405564fb73acfe1 542 Gene3D G3DSA:1.20.1250.20 225 401 3.1E-14 T 28-03-2018 APY29_RS10890 2e8710dddc7860026405564fb73acfe1 542 Gene3D G3DSA:1.20.1250.20 7 203 7.2E-26 T 28-03-2018 APY29_RS10890 2e8710dddc7860026405564fb73acfe1 542 SUPERFAMILY SSF103473 19 401 8.5E-49 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS21530 396cccc62b8f72d8ac43c4fe1fc11ecd 401 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 377 1.2E-84 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 APY29_RS21530 396cccc62b8f72d8ac43c4fe1fc11ecd 401 SUPERFAMILY SSF111369 56 300 7.19E-81 T 28-03-2018 APY29_RS21530 396cccc62b8f72d8ac43c4fe1fc11ecd 401 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 295 9.0E-14 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APY29_RS21530 396cccc62b8f72d8ac43c4fe1fc11ecd 401 Gene3D G3DSA:1.20.1600.10 30 338 7.2E-32 T 28-03-2018 APY29_RS05985 30087b29378c0689c0b1c8407ccbe147 168 Pfam PF13761 Domain of unknown function (DUF4166) 10 165 2.0E-32 T 28-03-2018 IPR025311 Domain of unknown function DUF4166 APY29_RS11500 9c3813517717fba4717fa7beb34a8bb7 198 Pfam PF01464 Transglycosylase SLT domain 37 158 1.0E-5 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 APY29_RS11500 9c3813517717fba4717fa7beb34a8bb7 198 Gene3D G3DSA:1.10.530.10 24 187 1.9E-14 T 28-03-2018 APY29_RS11500 9c3813517717fba4717fa7beb34a8bb7 198 SUPERFAMILY SSF53955 104 177 3.97E-14 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS11500 9c3813517717fba4717fa7beb34a8bb7 198 SUPERFAMILY SSF53955 34 76 3.97E-14 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS14165 b85d44e657ccfe5a1858bc7ee2935525 474 SUPERFAMILY SSF103473 20 469 4.32E-59 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS14165 b85d44e657ccfe5a1858bc7ee2935525 474 Gene3D G3DSA:1.20.1250.20 24 237 2.9E-26 T 28-03-2018 APY29_RS14165 b85d44e657ccfe5a1858bc7ee2935525 474 Gene3D G3DSA:1.20.1250.20 274 471 1.1E-18 T 28-03-2018 APY29_RS14165 b85d44e657ccfe5a1858bc7ee2935525 474 Pfam PF00083 Sugar (and other) transporter 39 470 7.7E-30 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APY29_RS14165 b85d44e657ccfe5a1858bc7ee2935525 474 ProSitePatterns PS00216 Sugar transport proteins signature 1. 96 112 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APY29_RS14165 b85d44e657ccfe5a1858bc7ee2935525 474 ProSitePatterns PS00217 Sugar transport proteins signature 2. 138 163 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APY29_RS20365 1d3a5a843961f4eb2ac9c91943092571 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 25.406 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APY29_RS20365 1d3a5a843961f4eb2ac9c91943092571 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 28-03-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 APY29_RS20365 1d3a5a843961f4eb2ac9c91943092571 95 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 8.3E-32 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APY29_RS20365 1d3a5a843961f4eb2ac9c91943092571 95 PRINTS PR00297 10kDa chaperonin signature 3 18 3.6E-32 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APY29_RS20365 1d3a5a843961f4eb2ac9c91943092571 95 PRINTS PR00297 10kDa chaperonin signature 60 72 3.6E-32 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APY29_RS20365 1d3a5a843961f4eb2ac9c91943092571 95 PRINTS PR00297 10kDa chaperonin signature 81 94 3.6E-32 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APY29_RS20365 1d3a5a843961f4eb2ac9c91943092571 95 PRINTS PR00297 10kDa chaperonin signature 25 46 3.6E-32 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APY29_RS20365 1d3a5a843961f4eb2ac9c91943092571 95 SMART SM00883 2 94 1.7E-51 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APY29_RS20365 1d3a5a843961f4eb2ac9c91943092571 95 Gene3D G3DSA:2.30.33.40 1 95 7.8E-35 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APY29_RS20365 1d3a5a843961f4eb2ac9c91943092571 95 SUPERFAMILY SSF50129 1 94 4.36E-31 T 28-03-2018 IPR011032 GroES-like APY29_RS21670 908cb53c932dfca104d78754a9d79651 399 SUPERFAMILY SSF103473 14 391 9.16E-52 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS21670 908cb53c932dfca104d78754a9d79651 399 Gene3D G3DSA:1.20.1250.20 16 207 3.4E-26 T 28-03-2018 APY29_RS21670 908cb53c932dfca104d78754a9d79651 399 Gene3D G3DSA:1.20.1250.20 208 393 7.8E-12 T 28-03-2018 APY29_RS21670 908cb53c932dfca104d78754a9d79651 399 Pfam PF07690 Major Facilitator Superfamily 30 364 2.1E-32 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS00390 fb134ae3026dd18b1fb5b7f445580935 74 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 4 70 7.1E-13 T 28-03-2018 IPR008792 Coenzyme PQQ synthesis D APY29_RS01400 b89e89dd5cd7705a0a5a4f1406b2ed87 346 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 27 328 7.7E-102 T 28-03-2018 IPR010732 Type VI secretion, TssG-like APY29_RS01400 b89e89dd5cd7705a0a5a4f1406b2ed87 346 Pfam PF06996 Type VI secretion, TssG 27 328 6.4E-95 T 28-03-2018 IPR010732 Type VI secretion, TssG-like APY29_RS23460 b1d9da6755b410b903d3834e2a562bd9 79 Pfam PF16762 Ribbon-helix-helix domain 2 78 1.0E-38 T 28-03-2018 IPR031914 XACb0070, ribbon-helix-helix domain APY29_RS10550 40b61e0ace2bbe2d9c5c502e7280459a 539 Pfam PF10091 Putative glucoamylase 231 478 3.9E-90 T 28-03-2018 IPR019282 Domain of unknown function DUF2329 APY29_RS10550 40b61e0ace2bbe2d9c5c502e7280459a 539 PIRSF PIRSF028431 13 506 1.3E-219 T 28-03-2018 IPR016883 Uncharacterised conserved protein UCP028431 APY29_RS22055 12139ce1c9dda3c5a7e9a094ab7e44fe 338 SUPERFAMILY SSF53901 46 338 4.24E-40 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS22055 12139ce1c9dda3c5a7e9a094ab7e44fe 338 Gene3D G3DSA:3.40.47.10 199 338 1.7E-25 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS22055 12139ce1c9dda3c5a7e9a094ab7e44fe 338 Gene3D G3DSA:3.40.47.10 3 198 2.5E-27 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS22055 12139ce1c9dda3c5a7e9a094ab7e44fe 338 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 253 333 1.7E-18 T 28-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 APY29_RS22055 12139ce1c9dda3c5a7e9a094ab7e44fe 338 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 195 1.1E-7 T 28-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 APY29_RS12615 1282a5a69a5e518aa7c2fd659f255e9d 396 SMART SM00283 78 350 6.9E-13 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS12615 1282a5a69a5e518aa7c2fd659f255e9d 396 Gene3D G3DSA:1.10.287.950 89 315 1.8E-40 T 28-03-2018 APY29_RS12615 1282a5a69a5e518aa7c2fd659f255e9d 396 SUPERFAMILY SSF58104 63 342 1.83E-44 T 28-03-2018 APY29_RS12615 1282a5a69a5e518aa7c2fd659f255e9d 396 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 163 307 6.2E-30 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS19400 1d87dc699e2bec4adf181e397cb87d9e 849 Gene3D G3DSA:2.170.130.10 25 171 1.0E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS19400 1d87dc699e2bec4adf181e397cb87d9e 849 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 33 848 2.9E-202 T 28-03-2018 IPR010104 Bacterial TonB-dependent receptor APY29_RS19400 1d87dc699e2bec4adf181e397cb87d9e 849 Pfam PF00593 TonB dependent receptor 298 848 9.4E-39 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS19400 1d87dc699e2bec4adf181e397cb87d9e 849 SUPERFAMILY SSF56935 26 230 8.11E-95 T 28-03-2018 APY29_RS19400 1d87dc699e2bec4adf181e397cb87d9e 849 SUPERFAMILY SSF56935 267 468 8.11E-95 T 28-03-2018 APY29_RS19400 1d87dc699e2bec4adf181e397cb87d9e 849 SUPERFAMILY SSF56935 502 848 8.11E-95 T 28-03-2018 APY29_RS19400 1d87dc699e2bec4adf181e397cb87d9e 849 Gene3D G3DSA:2.40.170.20 175 848 2.1E-75 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS19400 1d87dc699e2bec4adf181e397cb87d9e 849 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 164 1.4E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS18590 f05658e714afdc6c7a58ec8b67a6453e 269 Pfam PF01453 D-mannose binding lectin 178 244 1.3E-13 T 28-03-2018 IPR001480 Bulb-type lectin domain APY29_RS18590 f05658e714afdc6c7a58ec8b67a6453e 269 SUPERFAMILY SSF51110 169 255 1.96E-18 T 28-03-2018 IPR001480 Bulb-type lectin domain APY29_RS18590 f05658e714afdc6c7a58ec8b67a6453e 269 Gene3D G3DSA:2.90.10.10 30 155 1.6E-11 T 28-03-2018 IPR001480 Bulb-type lectin domain APY29_RS18590 f05658e714afdc6c7a58ec8b67a6453e 269 SMART SM00108 160 269 0.0026 T 28-03-2018 IPR001480 Bulb-type lectin domain APY29_RS18590 f05658e714afdc6c7a58ec8b67a6453e 269 Gene3D G3DSA:2.90.10.10 163 267 6.5E-13 T 28-03-2018 IPR001480 Bulb-type lectin domain APY29_RS18590 f05658e714afdc6c7a58ec8b67a6453e 269 SUPERFAMILY SSF51110 128 151 9.75E-9 T 28-03-2018 IPR001480 Bulb-type lectin domain APY29_RS18590 f05658e714afdc6c7a58ec8b67a6453e 269 SUPERFAMILY SSF51110 35 100 9.75E-9 T 28-03-2018 IPR001480 Bulb-type lectin domain APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Gene3D G3DSA:3.40.47.10 645 711 0.0011 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Gene3D G3DSA:3.10.20.90 338 375 0.1 T 28-03-2018 APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Gene3D G3DSA:3.10.20.90 852 884 0.065 T 28-03-2018 APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Gene3D G3DSA:3.10.20.90 477 511 0.065 T 28-03-2018 APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Gene3D G3DSA:3.10.20.90 615 644 0.03 T 28-03-2018 APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Gene3D G3DSA:3.10.20.90 376 409 0.37 T 28-03-2018 APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Gene3D G3DSA:3.10.20.90 581 614 0.058 T 28-03-2018 APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Gene3D G3DSA:3.10.20.90 749 783 0.053 T 28-03-2018 APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Gene3D G3DSA:3.10.20.90 546 580 0.058 T 28-03-2018 APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Gene3D G3DSA:3.10.20.90 410 442 0.42 T 28-03-2018 APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Gene3D G3DSA:3.10.20.90 819 851 0.065 T 28-03-2018 APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Gene3D G3DSA:3.10.20.90 919 955 0.065 T 28-03-2018 APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Gene3D G3DSA:3.10.20.90 512 545 0.069 T 28-03-2018 APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Gene3D G3DSA:3.10.20.90 784 818 0.07 T 28-03-2018 APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Gene3D G3DSA:3.10.20.90 443 476 0.42 T 28-03-2018 APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Gene3D G3DSA:3.10.20.90 713 748 0.034 T 28-03-2018 APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Gene3D G3DSA:3.10.20.90 885 918 0.065 T 28-03-2018 APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Gene3D G3DSA:3.40.47.10 197 337 0.044 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 425 456 4.9E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 629 660 3.2E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 357 388 8.9E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 697 728 4.9E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 459 490 4.9E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 867 898 7.2E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 969 998 3.4E-10 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 901 932 7.2E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 527 558 7.2E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 289 320 3.2E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 663 694 3.2E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 799 830 4.9E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 323 354 3.8E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 493 524 7.2E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 833 864 1.3E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 731 762 3.2E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 595 626 4.9E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 1005 1029 0.047 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 561 592 1.3E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 935 966 7.2E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 765 796 1.3E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23565 ad96b1422dd8167115b1faa7dc8de197 1266 Pfam PF03377 TAL effector repeat 391 422 4.9E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS21745 7ea1b80e355255019fc35c0c82abec45 284 PIRSF PIRSF031679 9 284 6.4E-114 T 28-03-2018 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted APY29_RS21745 7ea1b80e355255019fc35c0c82abec45 284 SUPERFAMILY SSF53335 58 248 8.0E-14 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS21745 7ea1b80e355255019fc35c0c82abec45 284 Gene3D G3DSA:3.40.50.150 39 278 9.8E-21 T 28-03-2018 APY29_RS14775 c2a7b985b605b2c32744fa2ac8d70c86 228 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 6 225 1.4E-82 T 28-03-2018 IPR012808 Conserved hypothetical protein CHP02453 APY29_RS14775 c2a7b985b605b2c32744fa2ac8d70c86 228 Pfam PF09365 Conserved hypothetical protein (DUF2461) 10 219 9.8E-60 T 28-03-2018 IPR012808 Conserved hypothetical protein CHP02453 APY29_RS14775 c2a7b985b605b2c32744fa2ac8d70c86 228 PIRSF PIRSF028451 1 228 8.2E-99 T 28-03-2018 IPR015996 Uncharacterised conserved protein UCP028451 APY29_RS08770 d20fabe450287e04a62effab8e3f126b 744 Gene3D G3DSA:3.10.20.30 8 175 1.6E-16 T 28-03-2018 IPR012675 Beta-grasp domain APY29_RS08770 d20fabe450287e04a62effab8e3f126b 744 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 14 89 1.2E-18 T 28-03-2018 APY29_RS08770 d20fabe450287e04a62effab8e3f126b 744 Gene3D G3DSA:3.40.50.740 285 420 2.7E-16 T 28-03-2018 APY29_RS08770 d20fabe450287e04a62effab8e3f126b 744 SUPERFAMILY SSF50692 677 735 1.79E-12 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain APY29_RS08770 d20fabe450287e04a62effab8e3f126b 744 SMART SM00929 96 136 2.5E-19 T 28-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08770 d20fabe450287e04a62effab8e3f126b 744 Pfam PF00384 Molybdopterin oxidoreductase 445 608 6.1E-9 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08770 d20fabe450287e04a62effab8e3f126b 744 Pfam PF00384 Molybdopterin oxidoreductase 285 414 2.9E-16 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08770 d20fabe450287e04a62effab8e3f126b 744 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 44 61 - T 28-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08770 d20fabe450287e04a62effab8e3f126b 744 Gene3D G3DSA:3.40.50.740 432 645 7.4E-15 T 28-03-2018 APY29_RS08770 d20fabe450287e04a62effab8e3f126b 744 SUPERFAMILY SSF54292 15 87 7.18E-19 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APY29_RS08770 d20fabe450287e04a62effab8e3f126b 744 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 111 123 - T 28-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08770 d20fabe450287e04a62effab8e3f126b 744 SUPERFAMILY SSF54862 89 223 2.01E-36 T 28-03-2018 APY29_RS08770 d20fabe450287e04a62effab8e3f126b 744 Gene3D G3DSA:2.40.40.20 663 744 9.5E-14 T 28-03-2018 APY29_RS08770 d20fabe450287e04a62effab8e3f126b 744 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 158 168 - T 28-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08770 d20fabe450287e04a62effab8e3f126b 744 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 96 132 6.7E-16 T 28-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08770 d20fabe450287e04a62effab8e3f126b 744 SUPERFAMILY SSF53706 226 627 7.01E-73 T 28-03-2018 APY29_RS08770 d20fabe450287e04a62effab8e3f126b 744 Pfam PF01568 Molydopterin dinucleotide binding domain 676 730 1.5E-11 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APY29_RS08770 d20fabe450287e04a62effab8e3f126b 744 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 17 607 7.5E-206 T 28-03-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08095 cad3507bd60012eeebf34fbaf83fe19b 375 Pfam PF01590 GAF domain 47 176 5.1E-10 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS08095 cad3507bd60012eeebf34fbaf83fe19b 375 SMART SM00065 45 188 1.1E-7 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS08095 cad3507bd60012eeebf34fbaf83fe19b 375 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 217 373 2.0E-43 T 28-03-2018 IPR000160 GGDEF domain APY29_RS08095 cad3507bd60012eeebf34fbaf83fe19b 375 Gene3D G3DSA:3.30.70.270 203 375 9.6E-52 T 28-03-2018 APY29_RS08095 cad3507bd60012eeebf34fbaf83fe19b 375 Gene3D G3DSA:3.30.450.40 29 202 9.8E-24 T 28-03-2018 IPR029016 GAF domain-like APY29_RS08095 cad3507bd60012eeebf34fbaf83fe19b 375 SMART SM00267 208 374 2.4E-53 T 28-03-2018 IPR000160 GGDEF domain APY29_RS08095 cad3507bd60012eeebf34fbaf83fe19b 375 SUPERFAMILY SSF55781 47 190 1.16E-25 T 28-03-2018 IPR029016 GAF domain-like APY29_RS08095 cad3507bd60012eeebf34fbaf83fe19b 375 SUPERFAMILY SSF55073 224 373 1.33E-44 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS08095 cad3507bd60012eeebf34fbaf83fe19b 375 Pfam PF00990 Diguanylate cyclase, GGDEF domain 220 370 7.4E-41 T 28-03-2018 IPR000160 GGDEF domain APY29_RS14635 5f7a6d5b1bfff80693def0b884a9b272 76 SUPERFAMILY SSF46911 3 74 4.84E-28 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS14635 5f7a6d5b1bfff80693def0b884a9b272 76 Gene3D G3DSA:4.10.640.10 1 76 4.5E-29 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS14635 5f7a6d5b1bfff80693def0b884a9b272 76 Pfam PF01084 Ribosomal protein S18 19 68 1.9E-23 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS14635 5f7a6d5b1bfff80693def0b884a9b272 76 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-16 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS14635 5f7a6d5b1bfff80693def0b884a9b272 76 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-16 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS14635 5f7a6d5b1bfff80693def0b884a9b272 76 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-16 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS14635 5f7a6d5b1bfff80693def0b884a9b272 76 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-16 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS14635 5f7a6d5b1bfff80693def0b884a9b272 76 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 28-03-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS14635 5f7a6d5b1bfff80693def0b884a9b272 76 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 8.5E-35 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS14635 5f7a6d5b1bfff80693def0b884a9b272 76 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 1.0E-22 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS14635 5f7a6d5b1bfff80693def0b884a9b272 76 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.61 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS09890 c8670f813a820eb0b0d6d940da4d4b13 214 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 9 44 1.0E-14 T 28-03-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 APY29_RS09890 c8670f813a820eb0b0d6d940da4d4b13 214 Gene3D G3DSA:1.20.5.510 9 37 5.0E-16 T 28-03-2018 APY29_RS09890 c8670f813a820eb0b0d6d940da4d4b13 214 Pfam PF00355 Rieske [2Fe-2S] domain 109 182 1.5E-9 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APY29_RS09890 c8670f813a820eb0b0d6d940da4d4b13 214 PRINTS PR00162 Rieske 2Fe-2S subunit signature 157 169 2.6E-5 T 28-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 APY29_RS09890 c8670f813a820eb0b0d6d940da4d4b13 214 PRINTS PR00162 Rieske 2Fe-2S subunit signature 126 137 2.6E-5 T 28-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 APY29_RS09890 c8670f813a820eb0b0d6d940da4d4b13 214 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 13 198 2.1E-68 T 28-03-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 APY29_RS09890 c8670f813a820eb0b0d6d940da4d4b13 214 SUPERFAMILY SSF50022 34 200 1.08E-38 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APY29_RS09890 c8670f813a820eb0b0d6d940da4d4b13 214 Gene3D G3DSA:2.102.10.10 38 213 9.8E-39 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APY29_RS21895 af19b425c9740597efdb0d66c13e6b11 694 SUPERFAMILY SSF53474 393 654 1.32E-67 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS21895 af19b425c9740597efdb0d66c13e6b11 694 Gene3D G3DSA:2.140.10.30 152 382 8.6E-17 T 28-03-2018 APY29_RS21895 af19b425c9740597efdb0d66c13e6b11 694 Gene3D G3DSA:2.140.10.30 40 151 2.8E-8 T 28-03-2018 APY29_RS21895 af19b425c9740597efdb0d66c13e6b11 694 Pfam PF00326 Prolyl oligopeptidase family 447 655 1.5E-43 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APY29_RS21895 af19b425c9740597efdb0d66c13e6b11 694 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 451 475 9.2E-6 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APY29_RS21895 af19b425c9740597efdb0d66c13e6b11 694 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 587 609 9.2E-6 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APY29_RS21895 af19b425c9740597efdb0d66c13e6b11 694 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 509 529 9.2E-6 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APY29_RS21895 af19b425c9740597efdb0d66c13e6b11 694 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 479 498 9.2E-6 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APY29_RS21895 af19b425c9740597efdb0d66c13e6b11 694 Gene3D G3DSA:3.40.50.1820 383 658 1.8E-52 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS21895 af19b425c9740597efdb0d66c13e6b11 694 SUPERFAMILY SSF82171 58 283 1.82E-16 T 28-03-2018 APY29_RS21895 af19b425c9740597efdb0d66c13e6b11 694 SUPERFAMILY SSF82171 328 380 1.82E-16 T 28-03-2018 APY29_RS08250 ed7e1ce2028f762f07952fd93c041de8 149 SUPERFAMILY SSF54637 5 144 2.61E-24 T 28-03-2018 IPR029069 HotDog domain APY29_RS08250 ed7e1ce2028f762f07952fd93c041de8 149 Gene3D G3DSA:3.10.129.10 1 146 1.2E-21 T 28-03-2018 APY29_RS08250 ed7e1ce2028f762f07952fd93c041de8 149 Pfam PF14539 Domain of unknown function (DUF4442) 5 143 5.9E-23 T 28-03-2018 IPR027961 Protein of unknown function DUF4442 APY29_RS06885 6f80f2c0ff88df0a27aeda06293a6581 296 Pfam PF01430 Hsp33 protein 5 273 3.5E-76 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 APY29_RS06885 6f80f2c0ff88df0a27aeda06293a6581 296 Gene3D G3DSA:1.10.287.480 182 226 1.7E-14 T 28-03-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain APY29_RS06885 6f80f2c0ff88df0a27aeda06293a6581 296 PIRSF PIRSF005261 1 286 2.7E-96 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 APY29_RS06885 6f80f2c0ff88df0a27aeda06293a6581 296 Gene3D G3DSA:3.90.1280.10 227 282 4.0E-20 T 28-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 APY29_RS06885 6f80f2c0ff88df0a27aeda06293a6581 296 SUPERFAMILY SSF118352 226 283 3.27E-17 T 28-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 APY29_RS06885 6f80f2c0ff88df0a27aeda06293a6581 296 SUPERFAMILY SSF64397 4 233 2.88E-58 T 28-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 APY29_RS06885 6f80f2c0ff88df0a27aeda06293a6581 296 Gene3D G3DSA:3.55.30.10 1 177 4.9E-48 T 28-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 APY29_RS15120 2b5c67d7f71cd88b13db65cd66b20df1 942 SUPERFAMILY SSF52518 117 546 3.05E-86 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold APY29_RS15120 2b5c67d7f71cd88b13db65cd66b20df1 942 Pfam PF00676 Dehydrogenase E1 component 209 516 2.8E-53 T 28-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 APY29_RS15120 2b5c67d7f71cd88b13db65cd66b20df1 942 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 932 3.0E-51 T 28-03-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APY29_RS15120 2b5c67d7f71cd88b13db65cd66b20df1 942 Pfam PF02779 Transketolase, pyrimidine binding domain 595 788 1.8E-62 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain APY29_RS15120 2b5c67d7f71cd88b13db65cd66b20df1 942 Gene3D G3DSA:3.40.50.970 592 800 1.1E-57 T 28-03-2018 APY29_RS15120 2b5c67d7f71cd88b13db65cd66b20df1 942 SMART SM00861 594 787 9.2E-53 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain APY29_RS15120 2b5c67d7f71cd88b13db65cd66b20df1 942 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 11 49 1.3E-15 T 28-03-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APY29_RS15120 2b5c67d7f71cd88b13db65cd66b20df1 942 Gene3D G3DSA:3.40.50.970 162 520 8.7E-90 T 28-03-2018 APY29_RS15120 2b5c67d7f71cd88b13db65cd66b20df1 942 Gene3D G3DSA:1.10.287.1150 80 161 3.3E-19 T 28-03-2018 APY29_RS15120 2b5c67d7f71cd88b13db65cd66b20df1 942 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 932 0.0 T 28-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APY29_RS15120 2b5c67d7f71cd88b13db65cd66b20df1 942 SUPERFAMILY SSF52518 577 794 1.43E-52 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold APY29_RS15120 2b5c67d7f71cd88b13db65cd66b20df1 942 PIRSF PIRSF000157 2 934 0.0 T 28-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APY29_RS11520 2011743e293419eddd661d2a5bb12a8c 759 Gene3D G3DSA:3.40.50.300 572 732 1.1E-16 T 28-03-2018 APY29_RS11520 2011743e293419eddd661d2a5bb12a8c 759 SUPERFAMILY SSF52540 68 180 6.75E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11520 2011743e293419eddd661d2a5bb12a8c 759 SUPERFAMILY SSF52540 345 411 6.75E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11520 2011743e293419eddd661d2a5bb12a8c 759 Gene3D G3DSA:3.40.50.10810 55 415 5.4E-25 T 28-03-2018 APY29_RS11520 2011743e293419eddd661d2a5bb12a8c 759 SUPERFAMILY SSF52540 571 736 4.58E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11520 2011743e293419eddd661d2a5bb12a8c 759 SUPERFAMILY SSF52540 351 412 4.58E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11520 2011743e293419eddd661d2a5bb12a8c 759 SMART SM00487 69 413 1.3E-9 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APY29_RS11520 2011743e293419eddd661d2a5bb12a8c 759 Pfam PF00271 Helicase conserved C-terminal domain 585 695 2.0E-6 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS07490 9b88e7567d5db4992c49ae7064a40397 152 SUPERFAMILY SSF46785 3 133 4.88E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS07490 9b88e7567d5db4992c49ae7064a40397 152 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 131 4.5E-30 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type APY29_RS07490 9b88e7567d5db4992c49ae7064a40397 152 Pfam PF02082 Transcriptional regulator 3 82 5.1E-22 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type APY29_RS07490 9b88e7567d5db4992c49ae7064a40397 152 TIGRFAM TIGR02944 suf_reg_Xantho: FeS assembly SUF system regulator 1 130 7.0E-62 T 28-03-2018 IPR014290 SUF system FeS cluster assembly regulator APY29_RS07490 9b88e7567d5db4992c49ae7064a40397 152 Gene3D G3DSA:1.10.10.10 2 138 5.5E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS06755 d704efbfb3d631d52cb7d93e5027165f 338 SUPERFAMILY SSF53067 18 335 2.14E-51 T 28-03-2018 APY29_RS06755 d704efbfb3d631d52cb7d93e5027165f 338 Pfam PF02685 Glucokinase 20 334 6.3E-101 T 28-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 APY29_RS06755 d704efbfb3d631d52cb7d93e5027165f 338 Gene3D G3DSA:3.30.420.40 5 129 2.0E-16 T 28-03-2018 APY29_RS06755 d704efbfb3d631d52cb7d93e5027165f 338 Gene3D G3DSA:3.40.367.20 130 319 1.1E-28 T 28-03-2018 APY29_RS04960 ec97cdfd0b15265621af8d576172194b 294 Gene3D G3DSA:1.10.10.10 1 83 4.0E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS04960 ec97cdfd0b15265621af8d576172194b 294 Gene3D G3DSA:3.40.190.10 177 261 4.2E-20 T 28-03-2018 APY29_RS04960 ec97cdfd0b15265621af8d576172194b 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.5E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS04960 ec97cdfd0b15265621af8d576172194b 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.5E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS04960 ec97cdfd0b15265621af8d576172194b 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.5E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS04960 ec97cdfd0b15265621af8d576172194b 294 SUPERFAMILY SSF46785 1 110 1.45E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS04960 ec97cdfd0b15265621af8d576172194b 294 Gene3D G3DSA:3.40.190.10 87 176 7.1E-20 T 28-03-2018 APY29_RS04960 ec97cdfd0b15265621af8d576172194b 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 6.1E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS04960 ec97cdfd0b15265621af8d576172194b 294 SUPERFAMILY SSF53850 90 289 1.18E-42 T 28-03-2018 APY29_RS04960 ec97cdfd0b15265621af8d576172194b 294 Pfam PF03466 LysR substrate binding domain 88 289 9.0E-43 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS22260 bdd8d9703d6e2312c6d7861fc18f7ddb 158 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 98 1.9E-14 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 APY29_RS22260 bdd8d9703d6e2312c6d7861fc18f7ddb 158 SMART SM00855 3 114 1.1E-6 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 APY29_RS22260 bdd8d9703d6e2312c6d7861fc18f7ddb 158 Gene3D G3DSA:3.40.50.1240 1 158 5.7E-29 T 28-03-2018 IPR029033 Histidine phosphatase superfamily APY29_RS22260 bdd8d9703d6e2312c6d7861fc18f7ddb 158 SUPERFAMILY SSF53254 1 140 2.08E-27 T 28-03-2018 IPR029033 Histidine phosphatase superfamily APY29_RS21625 35ff280a94a508f1706c40a118149880 350 Gene3D G3DSA:3.90.380.10 126 343 2.9E-40 T 28-03-2018 APY29_RS21625 35ff280a94a508f1706c40a118149880 350 SUPERFAMILY SSF50022 20 132 7.99E-33 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APY29_RS21625 35ff280a94a508f1706c40a118149880 350 Pfam PF00355 Rieske [2Fe-2S] domain 25 105 9.4E-17 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APY29_RS21625 35ff280a94a508f1706c40a118149880 350 Gene3D G3DSA:2.102.10.10 23 125 6.9E-25 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APY29_RS21625 35ff280a94a508f1706c40a118149880 350 SUPERFAMILY SSF55961 139 342 3.85E-26 T 28-03-2018 APY29_RS05330 42310ace0a94afa2bf45d770a180a645 840 SUPERFAMILY SSF56601 300 351 3.32E-117 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like APY29_RS05330 42310ace0a94afa2bf45d770a180a645 840 SUPERFAMILY SSF56601 449 636 3.32E-117 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like APY29_RS05330 42310ace0a94afa2bf45d770a180a645 840 SUPERFAMILY SSF56601 248 271 3.32E-117 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like APY29_RS05330 42310ace0a94afa2bf45d770a180a645 840 SUPERFAMILY SSF56601 694 817 3.32E-117 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like APY29_RS05330 42310ace0a94afa2bf45d770a180a645 840 Gene3D G3DSA:3.40.710.10 286 838 1.3E-116 T 28-03-2018 APY29_RS05330 42310ace0a94afa2bf45d770a180a645 840 Pfam PF00912 Transglycosylase 92 267 8.2E-57 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 APY29_RS05330 42310ace0a94afa2bf45d770a180a645 840 Pfam PF17092 Penicillin-binding protein OB-like domain 354 450 2.6E-9 T 28-03-2018 IPR031376 Penicillin-binding protein, OB-like domain APY29_RS05330 42310ace0a94afa2bf45d770a180a645 840 Gene3D G3DSA:1.10.3810.10 84 284 8.0E-71 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 APY29_RS05330 42310ace0a94afa2bf45d770a180a645 840 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 101 788 1.6E-171 T 28-03-2018 APY29_RS05330 42310ace0a94afa2bf45d770a180a645 840 SUPERFAMILY SSF53955 79 294 7.03E-69 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS05330 42310ace0a94afa2bf45d770a180a645 840 Pfam PF00905 Penicillin binding protein transpeptidase domain 455 628 8.1E-22 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APY29_RS17755 cf8e2e7b428a764aab1ce5deba6647b8 214 SUPERFAMILY SSF53254 1 203 1.83E-54 T 28-03-2018 IPR029033 Histidine phosphatase superfamily APY29_RS17755 cf8e2e7b428a764aab1ce5deba6647b8 214 PIRSF PIRSF000709 1 184 5.1E-14 T 28-03-2018 APY29_RS17755 cf8e2e7b428a764aab1ce5deba6647b8 214 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 198 3.7E-57 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 APY29_RS17755 cf8e2e7b428a764aab1ce5deba6647b8 214 SMART SM00855 2 158 7.5E-22 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 APY29_RS17755 cf8e2e7b428a764aab1ce5deba6647b8 214 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 28-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 APY29_RS17755 cf8e2e7b428a764aab1ce5deba6647b8 214 Gene3D G3DSA:3.40.50.1240 1 210 3.3E-50 T 28-03-2018 IPR029033 Histidine phosphatase superfamily APY29_RS23465 bc38def80f828f23af629643451adbe4 139 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 2 113 2.0E-14 T 28-03-2018 IPR002850 PIN family, putative toxin-antitoxin system toxin component APY29_RS23465 bc38def80f828f23af629643451adbe4 139 SUPERFAMILY SSF88723 1 115 3.92E-13 T 28-03-2018 IPR029060 PIN domain-like APY29_RS23465 bc38def80f828f23af629643451adbe4 139 Pfam PF13470 PIN domain 2 114 4.2E-16 T 28-03-2018 IPR002716 PIN domain APY29_RS23465 bc38def80f828f23af629643451adbe4 139 SMART SM00670 1 117 2.1E-9 T 28-03-2018 IPR002716 PIN domain APY29_RS23465 bc38def80f828f23af629643451adbe4 139 Gene3D G3DSA:3.40.50.1010 1 130 1.7E-10 T 28-03-2018 IPR029060 PIN domain-like APY29_RS20000 0ee746e7330ecfceb7a162e6b43a3487 300 SUPERFAMILY SSF143865 10 233 1.44E-29 T 28-03-2018 APY29_RS20000 0ee746e7330ecfceb7a162e6b43a3487 300 Pfam PF01544 CorA-like Mg2+ transporter protein 11 296 3.5E-54 T 28-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 APY29_RS20000 0ee746e7330ecfceb7a162e6b43a3487 300 Gene3D G3DSA:1.20.58.340 110 232 2.4E-19 T 28-03-2018 APY29_RS20000 0ee746e7330ecfceb7a162e6b43a3487 300 SUPERFAMILY SSF144083 235 297 6.15E-17 T 28-03-2018 APY29_RS20000 0ee746e7330ecfceb7a162e6b43a3487 300 Gene3D G3DSA:3.30.460.20 3 106 2.4E-9 T 28-03-2018 APY29_RS20000 0ee746e7330ecfceb7a162e6b43a3487 300 Gene3D G3DSA:1.20.58.340 233 300 2.1E-15 T 28-03-2018 APY29_RS00780 4d73b0578c6f7c12b4afaf87681d9569 1238 Pfam PF01435 Peptidase family M48 133 346 2.8E-14 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 APY29_RS00780 4d73b0578c6f7c12b4afaf87681d9569 1238 Gene3D G3DSA:3.30.2010.10 69 162 4.9E-9 T 28-03-2018 APY29_RS01800 9955ccacf9b4c8570e17ba80518d4bee 133 Gene3D G3DSA:3.10.129.10 1 132 5.1E-38 T 28-03-2018 APY29_RS01800 9955ccacf9b4c8570e17ba80518d4bee 133 Pfam PF03061 Thioesterase superfamily 27 99 3.1E-18 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 APY29_RS01800 9955ccacf9b4c8570e17ba80518d4bee 133 SUPERFAMILY SSF54637 5 130 5.83E-40 T 28-03-2018 IPR029069 HotDog domain APY29_RS08665 32df4afddc3565c02a00213db048daa2 308 Gene3D G3DSA:3.40.190.10 95 174 9.4E-5 T 28-03-2018 APY29_RS08665 32df4afddc3565c02a00213db048daa2 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS08665 32df4afddc3565c02a00213db048daa2 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS08665 32df4afddc3565c02a00213db048daa2 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS08665 32df4afddc3565c02a00213db048daa2 308 SUPERFAMILY SSF46785 3 87 3.58E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS08665 32df4afddc3565c02a00213db048daa2 308 SUPERFAMILY SSF53850 95 296 1.47E-25 T 28-03-2018 APY29_RS08665 32df4afddc3565c02a00213db048daa2 308 Gene3D G3DSA:1.10.10.10 4 91 6.4E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS08665 32df4afddc3565c02a00213db048daa2 308 Gene3D G3DSA:3.40.190.10 175 264 2.8E-19 T 28-03-2018 APY29_RS08665 32df4afddc3565c02a00213db048daa2 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 9.0E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS08665 32df4afddc3565c02a00213db048daa2 308 Pfam PF03466 LysR substrate binding domain 95 293 5.6E-22 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS05560 d7c5153993abe3c8eca2aeeb21753030 179 Pfam PF01661 Macro domain 19 137 7.7E-43 T 28-03-2018 IPR002589 Macro domain APY29_RS05560 d7c5153993abe3c8eca2aeeb21753030 179 Gene3D G3DSA:3.40.220.10 1 179 4.1E-72 T 28-03-2018 APY29_RS05560 d7c5153993abe3c8eca2aeeb21753030 179 SMART SM00506 2 137 1.8E-52 T 28-03-2018 IPR002589 Macro domain APY29_RS05560 d7c5153993abe3c8eca2aeeb21753030 179 SUPERFAMILY SSF52949 1 171 5.55E-62 T 28-03-2018 APY29_RS06680 aac3e595469c0196fbc5e50aa0c33532 780 Gene3D G3DSA:2.70.98.10 43 357 1.4E-105 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 APY29_RS06680 aac3e595469c0196fbc5e50aa0c33532 780 Gene3D G3DSA:1.20.1050.60 381 472 3.2E-23 T 28-03-2018 APY29_RS06680 aac3e595469c0196fbc5e50aa0c33532 780 Gene3D G3DSA:1.20.1610.10 473 626 1.4E-56 T 28-03-2018 APY29_RS06680 aac3e595469c0196fbc5e50aa0c33532 780 Pfam PF07971 Glycosyl hydrolase family 92 277 761 2.0E-172 T 28-03-2018 IPR012939 Glycosyl hydrolase family 92 APY29_RS06680 aac3e595469c0196fbc5e50aa0c33532 780 SUPERFAMILY SSF48208 296 758 2.89E-28 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 APY29_RS06680 aac3e595469c0196fbc5e50aa0c33532 780 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 43 765 1.5E-200 T 28-03-2018 IPR005887 Alpha-1,2-mannosidase, putative APY29_RS06680 aac3e595469c0196fbc5e50aa0c33532 780 Gene3D G3DSA:3.30.2080.10 627 775 9.1E-66 T 28-03-2018 APY29_RS17225 9d39d6aabacb7e95e58024e7c1fd6b79 237 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 233 2.8E-49 T 28-03-2018 APY29_RS17225 9d39d6aabacb7e95e58024e7c1fd6b79 237 SUPERFAMILY SSF51735 5 234 5.11E-63 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS17225 9d39d6aabacb7e95e58024e7c1fd6b79 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 5.6E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17225 9d39d6aabacb7e95e58024e7c1fd6b79 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 5.6E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17225 9d39d6aabacb7e95e58024e7c1fd6b79 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 5.6E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17225 9d39d6aabacb7e95e58024e7c1fd6b79 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.4E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17225 9d39d6aabacb7e95e58024e7c1fd6b79 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17225 9d39d6aabacb7e95e58024e7c1fd6b79 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.4E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17225 9d39d6aabacb7e95e58024e7c1fd6b79 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.4E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17225 9d39d6aabacb7e95e58024e7c1fd6b79 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 1.4E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17225 9d39d6aabacb7e95e58024e7c1fd6b79 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 1.4E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17225 9d39d6aabacb7e95e58024e7c1fd6b79 237 Gene3D G3DSA:3.40.50.720 149 235 8.9E-22 T 28-03-2018 APY29_RS17225 9d39d6aabacb7e95e58024e7c1fd6b79 237 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 182 1.0E-4 T 28-03-2018 APY29_RS17225 9d39d6aabacb7e95e58024e7c1fd6b79 237 Gene3D G3DSA:3.40.50.720 3 148 2.0E-33 T 28-03-2018 APY29_RS07405 3ac633f0d30c86be0f09e16dff5a5a95 110 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 26 86 2.7E-22 T 28-03-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain APY29_RS07405 3ac633f0d30c86be0f09e16dff5a5a95 110 Pfam PF12836 Helix-hairpin-helix motif 26 86 1.0E-21 T 28-03-2018 APY29_RS07405 3ac633f0d30c86be0f09e16dff5a5a95 110 Gene3D G3DSA:1.10.150.310 45 104 4.0E-14 T 28-03-2018 APY29_RS07405 3ac633f0d30c86be0f09e16dff5a5a95 110 SUPERFAMILY SSF47781 25 91 2.78E-25 T 28-03-2018 IPR010994 RuvA domain 2-like APY29_RS07405 3ac633f0d30c86be0f09e16dff5a5a95 110 Gene3D G3DSA:1.10.150.20 7 44 6.7E-7 T 28-03-2018 APY29_RS02575 bf03acf90cf2dbbedecf300dd2706c35 265 SUPERFAMILY SSF52540 1 252 2.19E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS02575 bf03acf90cf2dbbedecf300dd2706c35 265 PIRSF PIRSF009320 2 54 2.2E-15 T 28-03-2018 APY29_RS02575 bf03acf90cf2dbbedecf300dd2706c35 265 PIRSF PIRSF009320 90 257 2.3E-8 T 28-03-2018 APY29_RS02575 bf03acf90cf2dbbedecf300dd2706c35 265 Pfam PF13614 AAA domain 3 177 9.3E-64 T 28-03-2018 IPR025669 AAA domain APY29_RS02575 bf03acf90cf2dbbedecf300dd2706c35 265 Gene3D G3DSA:3.40.50.300 1 264 6.4E-60 T 28-03-2018 APY29_RS20290 06103dd01c7203c6d15709e2c3a49c58 247 Gene3D G3DSA:2.40.128.110 61 234 3.8E-52 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APY29_RS20290 06103dd01c7203c6d15709e2c3a49c58 247 SUPERFAMILY SSF101874 66 233 2.62E-54 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APY29_RS20290 06103dd01c7203c6d15709e2c3a49c58 247 SMART SM00867 68 232 6.9E-70 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APY29_RS20290 06103dd01c7203c6d15709e2c3a49c58 247 Pfam PF04264 YceI-like domain 69 231 3.5E-44 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APY29_RS10275 ebc08f133c0da59d3f7b6ed5b1cc66b9 271 PIRSF PIRSF018982 2 257 5.3E-105 T 28-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 APY29_RS10275 ebc08f133c0da59d3f7b6ed5b1cc66b9 271 Gene3D G3DSA:3.40.50.2020 60 269 0.0031 T 28-03-2018 APY29_RS10275 ebc08f133c0da59d3f7b6ed5b1cc66b9 271 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 10 247 2.1E-95 T 28-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 APY29_RS10275 ebc08f133c0da59d3f7b6ed5b1cc66b9 271 Hamap MF_00601 Ethanolamine ammonia-lyase light chain [eutC]. 2 247 41.446 T 28-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 APY29_RS08075 b4566554da0861290aa44eebeadf45bd 165 Gene3D G3DSA:1.10.10.10 109 164 2.7E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS08075 b4566554da0861290aa44eebeadf45bd 165 SUPERFAMILY SSF88659 123 164 1.05E-7 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS08075 b4566554da0861290aa44eebeadf45bd 165 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 165 1.4E-22 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS08075 b4566554da0861290aa44eebeadf45bd 165 SUPERFAMILY SSF88946 10 89 3.92E-20 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS08075 b4566554da0861290aa44eebeadf45bd 165 Pfam PF04542 Sigma-70 region 2 14 80 6.0E-15 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS08075 b4566554da0861290aa44eebeadf45bd 165 Gene3D G3DSA:1.10.1740.10 5 108 4.3E-20 T 28-03-2018 APY29_RS08075 b4566554da0861290aa44eebeadf45bd 165 Pfam PF08281 Sigma-70, region 4 122 159 1.3E-9 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS09875 29d760af705d80952dc7238dc0bbacce 321 Pfam PF13280 WYL domain 142 309 1.3E-20 T 28-03-2018 IPR026881 WYL domain APY29_RS09875 29d760af705d80952dc7238dc0bbacce 321 Gene3D G3DSA:1.10.10.10 2 66 3.8E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS09875 29d760af705d80952dc7238dc0bbacce 321 SUPERFAMILY SSF46785 6 63 2.73E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS09875 29d760af705d80952dc7238dc0bbacce 321 Pfam PF08279 HTH domain 7 62 2.5E-11 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 APY29_RS18055 1c3fee5cac0eccf6dd7e1da1d0119a02 216 Gene3D G3DSA:4.10.960.10 62 172 1.2E-31 T 28-03-2018 APY29_RS18055 1c3fee5cac0eccf6dd7e1da1d0119a02 216 Pfam PF00297 Ribosomal protein L3 105 188 3.7E-15 T 28-03-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18055 1c3fee5cac0eccf6dd7e1da1d0119a02 216 ProSitePatterns PS00474 Ribosomal protein L3 signature. 108 131 - T 28-03-2018 IPR019926 Ribosomal protein L3, conserved site APY29_RS18055 1c3fee5cac0eccf6dd7e1da1d0119a02 216 SUPERFAMILY SSF50447 5 215 4.06E-78 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain APY29_RS18055 1c3fee5cac0eccf6dd7e1da1d0119a02 216 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 8 211 2.5E-85 T 28-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS18055 1c3fee5cac0eccf6dd7e1da1d0119a02 216 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 6 214 39.155 T 28-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS18715 3d7d838fa6d1b7f4f4cdbe3a06ba4aa0 264 SUPERFAMILY SSF55831 3 264 7.46E-128 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 APY29_RS18715 3d7d838fa6d1b7f4f4cdbe3a06ba4aa0 264 Gene3D G3DSA:3.30.572.10 1 264 2.3E-130 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 APY29_RS18715 3d7d838fa6d1b7f4f4cdbe3a06ba4aa0 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 4.7E-97 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 APY29_RS18715 3d7d838fa6d1b7f4f4cdbe3a06ba4aa0 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 84 4.9E-42 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 APY29_RS18715 3d7d838fa6d1b7f4f4cdbe3a06ba4aa0 264 Pfam PF00303 Thymidylate synthase 3 264 9.9E-122 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 APY29_RS18715 3d7d838fa6d1b7f4f4cdbe3a06ba4aa0 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.42 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 APY29_RS18715 3d7d838fa6d1b7f4f4cdbe3a06ba4aa0 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 28-03-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 APY29_RS18715 3d7d838fa6d1b7f4f4cdbe3a06ba4aa0 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 3.2E-49 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 APY29_RS18715 3d7d838fa6d1b7f4f4cdbe3a06ba4aa0 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 3.2E-49 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 APY29_RS18715 3d7d838fa6d1b7f4f4cdbe3a06ba4aa0 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 3.2E-49 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 APY29_RS18715 3d7d838fa6d1b7f4f4cdbe3a06ba4aa0 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 3.2E-49 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 APY29_RS18715 3d7d838fa6d1b7f4f4cdbe3a06ba4aa0 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 3.2E-49 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 APY29_RS06605 377a27f69736557a2b5984c54a155629 395 SUPERFAMILY SSF52738 221 393 2.75E-22 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APY29_RS06605 377a27f69736557a2b5984c54a155629 395 Gene3D G3DSA:3.40.50.180 216 393 2.3E-13 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APY29_RS06605 377a27f69736557a2b5984c54a155629 395 PIRSF PIRSF036592 1 395 1.3E-222 T 28-03-2018 IPR012071 Chemotaxis glutamate methyltransferase APY29_RS06605 377a27f69736557a2b5984c54a155629 395 Pfam PF01339 CheB methylesterase 226 376 2.2E-11 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APY29_RS11430 10676477846b3b5fd7eed5df2e57b4fa 307 Gene3D G3DSA:3.40.190.10 175 265 1.1E-15 T 28-03-2018 APY29_RS11430 10676477846b3b5fd7eed5df2e57b4fa 307 Pfam PF03466 LysR substrate binding domain 87 289 1.0E-30 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS11430 10676477846b3b5fd7eed5df2e57b4fa 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.8E-22 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS11430 10676477846b3b5fd7eed5df2e57b4fa 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.5E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS11430 10676477846b3b5fd7eed5df2e57b4fa 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.5E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS11430 10676477846b3b5fd7eed5df2e57b4fa 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.5E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS11430 10676477846b3b5fd7eed5df2e57b4fa 307 Gene3D G3DSA:1.10.10.10 1 83 3.5E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS11430 10676477846b3b5fd7eed5df2e57b4fa 307 SUPERFAMILY SSF46785 1 84 1.47E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS11430 10676477846b3b5fd7eed5df2e57b4fa 307 SUPERFAMILY SSF53850 91 288 1.5E-27 T 28-03-2018 APY29_RS11430 10676477846b3b5fd7eed5df2e57b4fa 307 Gene3D G3DSA:3.40.190.10 88 174 4.8E-13 T 28-03-2018 APY29_RS21880 d357cc675715dd5460d6811e4958b2af 387 Gene3D G3DSA:1.20.140.10 223 387 2.9E-55 T 28-03-2018 APY29_RS21880 d357cc675715dd5460d6811e4958b2af 387 Gene3D G3DSA:2.40.110.10 126 222 6.1E-41 T 28-03-2018 APY29_RS21880 d357cc675715dd5460d6811e4958b2af 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APY29_RS21880 d357cc675715dd5460d6811e4958b2af 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 6.1E-43 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APY29_RS21880 d357cc675715dd5460d6811e4958b2af 387 PIRSF PIRSF016578 143 387 1.0E-12 T 28-03-2018 APY29_RS21880 d357cc675715dd5460d6811e4958b2af 387 PIRSF PIRSF016578 13 117 0.58 T 28-03-2018 APY29_RS21880 d357cc675715dd5460d6811e4958b2af 387 SUPERFAMILY SSF56645 5 245 1.83E-81 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APY29_RS21880 d357cc675715dd5460d6811e4958b2af 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APY29_RS21880 d357cc675715dd5460d6811e4958b2af 387 Gene3D G3DSA:1.10.540.10 1 125 3.7E-37 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 APY29_RS21880 d357cc675715dd5460d6811e4958b2af 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 123 8.3E-33 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 APY29_RS21880 d357cc675715dd5460d6811e4958b2af 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 222 1.7E-26 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 APY29_RS21880 d357cc675715dd5460d6811e4958b2af 387 SUPERFAMILY SSF47203 234 384 1.18E-46 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APY29_RS11720 e15be8506701d4184387555b51b419f9 346 SUPERFAMILY SSF53098 118 289 2.47E-16 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS11720 e15be8506701d4184387555b51b419f9 346 Gene3D G3DSA:1.10.260.40 31 107 0.0014 T 28-03-2018 APY29_RS11720 e15be8506701d4184387555b51b419f9 346 Pfam PF13936 Helix-turn-helix domain 2 39 2.2E-8 T 28-03-2018 IPR025246 Transposase IS30-like HTH domain APY29_RS11720 e15be8506701d4184387555b51b419f9 346 Gene3D G3DSA:1.10.10.60 1 30 1.3E-15 T 28-03-2018 APY29_RS11720 e15be8506701d4184387555b51b419f9 346 Pfam PF00665 Integrase core domain 118 242 1.8E-27 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 APY29_RS11720 e15be8506701d4184387555b51b419f9 346 Gene3D G3DSA:3.30.420.10 113 325 1.4E-26 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS11720 e15be8506701d4184387555b51b419f9 346 SUPERFAMILY SSF46689 5 79 5.38E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS12225 e15be8506701d4184387555b51b419f9 346 SUPERFAMILY SSF53098 118 289 2.47E-16 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS12225 e15be8506701d4184387555b51b419f9 346 Gene3D G3DSA:1.10.260.40 31 107 0.0014 T 28-03-2018 APY29_RS12225 e15be8506701d4184387555b51b419f9 346 Pfam PF13936 Helix-turn-helix domain 2 39 2.2E-8 T 28-03-2018 IPR025246 Transposase IS30-like HTH domain APY29_RS12225 e15be8506701d4184387555b51b419f9 346 Gene3D G3DSA:1.10.10.60 1 30 1.3E-15 T 28-03-2018 APY29_RS12225 e15be8506701d4184387555b51b419f9 346 Pfam PF00665 Integrase core domain 118 242 1.8E-27 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 APY29_RS12225 e15be8506701d4184387555b51b419f9 346 Gene3D G3DSA:3.30.420.10 113 325 1.4E-26 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS12225 e15be8506701d4184387555b51b419f9 346 SUPERFAMILY SSF46689 5 79 5.38E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS12455 8dc1a6efe47250ae97c2001d29a51bfa 152 Gene3D G3DSA:2.40.170.20 1 151 6.2E-20 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS12455 8dc1a6efe47250ae97c2001d29a51bfa 152 Pfam PF00593 TonB dependent receptor 9 151 4.7E-11 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS12455 8dc1a6efe47250ae97c2001d29a51bfa 152 SUPERFAMILY SSF56935 1 151 1.65E-18 T 28-03-2018 APY29_RS19500 6685b60656aa8afea063dfad0a52aa1b 692 Pfam PF00263 Bacterial type II and III secretion system protein 459 623 7.6E-50 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 APY29_RS19500 6685b60656aa8afea063dfad0a52aa1b 692 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 36 632 2.4E-169 T 28-03-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 APY29_RS19500 6685b60656aa8afea063dfad0a52aa1b 692 Pfam PF03958 Bacterial type II/III secretion system short domain 190 252 3.1E-10 T 28-03-2018 IPR005644 NolW-like APY29_RS19500 6685b60656aa8afea063dfad0a52aa1b 692 Pfam PF03958 Bacterial type II/III secretion system short domain 126 186 1.0E-10 T 28-03-2018 IPR005644 NolW-like APY29_RS19500 6685b60656aa8afea063dfad0a52aa1b 692 Pfam PF03958 Bacterial type II/III secretion system short domain 259 357 3.2E-16 T 28-03-2018 IPR005644 NolW-like APY29_RS19500 6685b60656aa8afea063dfad0a52aa1b 692 PRINTS PR00811 Bacterial general secretion pathway protein D signature 455 479 5.8E-35 T 28-03-2018 IPR001775 GspD/PilQ family APY29_RS19500 6685b60656aa8afea063dfad0a52aa1b 692 PRINTS PR00811 Bacterial general secretion pathway protein D signature 587 605 5.8E-35 T 28-03-2018 IPR001775 GspD/PilQ family APY29_RS19500 6685b60656aa8afea063dfad0a52aa1b 692 PRINTS PR00811 Bacterial general secretion pathway protein D signature 490 500 5.8E-35 T 28-03-2018 IPR001775 GspD/PilQ family APY29_RS19500 6685b60656aa8afea063dfad0a52aa1b 692 PRINTS PR00811 Bacterial general secretion pathway protein D signature 357 367 5.8E-35 T 28-03-2018 IPR001775 GspD/PilQ family APY29_RS19500 6685b60656aa8afea063dfad0a52aa1b 692 PRINTS PR00811 Bacterial general secretion pathway protein D signature 610 624 5.8E-35 T 28-03-2018 IPR001775 GspD/PilQ family APY29_RS21305 b9e9547d5786d6bb453c623c4abf6f19 358 SUPERFAMILY SSF50022 6 120 3.14E-29 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APY29_RS21305 b9e9547d5786d6bb453c623c4abf6f19 358 Gene3D G3DSA:2.102.10.10 9 112 1.5E-19 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APY29_RS21305 b9e9547d5786d6bb453c623c4abf6f19 358 Gene3D G3DSA:3.90.380.10 113 352 6.6E-48 T 28-03-2018 APY29_RS21305 b9e9547d5786d6bb453c623c4abf6f19 358 Pfam PF00355 Rieske [2Fe-2S] domain 13 93 6.8E-14 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APY29_RS21305 b9e9547d5786d6bb453c623c4abf6f19 358 SUPERFAMILY SSF55961 105 352 3.3E-51 T 28-03-2018 APY29_RS10145 74d9a5e73419846eeed77de1d1aaa393 629 Pfam PF16326 ABC transporter C-terminal domain 560 628 2.2E-19 T 28-03-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 APY29_RS10145 74d9a5e73419846eeed77de1d1aaa393 629 Gene3D G3DSA:3.40.50.300 17 88 4.3E-10 T 28-03-2018 APY29_RS10145 74d9a5e73419846eeed77de1d1aaa393 629 SUPERFAMILY SSF52540 3 94 1.07E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS10145 74d9a5e73419846eeed77de1d1aaa393 629 SUPERFAMILY SSF52540 121 230 1.07E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS10145 74d9a5e73419846eeed77de1d1aaa393 629 Gene3D G3DSA:3.40.50.300 286 545 4.9E-59 T 28-03-2018 APY29_RS10145 74d9a5e73419846eeed77de1d1aaa393 629 Gene3D G3DSA:3.40.50.300 89 285 5.5E-42 T 28-03-2018 APY29_RS10145 74d9a5e73419846eeed77de1d1aaa393 629 SMART SM00382 339 510 1.8E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS10145 74d9a5e73419846eeed77de1d1aaa393 629 SMART SM00382 28 225 1.0E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS10145 74d9a5e73419846eeed77de1d1aaa393 629 SUPERFAMILY SSF52540 308 511 6.99E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS10145 74d9a5e73419846eeed77de1d1aaa393 629 Gene3D G3DSA:1.20.58.410 556 629 0.0035 T 28-03-2018 APY29_RS10145 74d9a5e73419846eeed77de1d1aaa393 629 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS10145 74d9a5e73419846eeed77de1d1aaa393 629 Pfam PF12848 ABC transporter 219 293 1.2E-9 T 28-03-2018 IPR032781 ABC-transporter extension domain APY29_RS10145 74d9a5e73419846eeed77de1d1aaa393 629 Pfam PF00005 ABC transporter 331 464 4.5E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS10145 74d9a5e73419846eeed77de1d1aaa393 629 Pfam PF00005 ABC transporter 20 180 4.7E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS10145 74d9a5e73419846eeed77de1d1aaa393 629 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS21710 a553eee3d59aec203e33db635cc9ecf0 110 Pfam PF00576 HIUase/Transthyretin family 4 109 9.9E-32 T 28-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 APY29_RS21710 a553eee3d59aec203e33db635cc9ecf0 110 PRINTS PR00189 Transthyretin signature 88 110 4.0E-9 T 28-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 APY29_RS21710 a553eee3d59aec203e33db635cc9ecf0 110 PRINTS PR00189 Transthyretin signature 3 23 4.0E-9 T 28-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 APY29_RS21710 a553eee3d59aec203e33db635cc9ecf0 110 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 110 2.8E-32 T 28-03-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 APY29_RS21710 a553eee3d59aec203e33db635cc9ecf0 110 ProSitePatterns PS00769 Transthyretin signature 2. 93 105 - T 28-03-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 APY29_RS21710 a553eee3d59aec203e33db635cc9ecf0 110 Gene3D G3DSA:2.60.40.180 1 110 1.7E-36 T 28-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 APY29_RS21710 a553eee3d59aec203e33db635cc9ecf0 110 SUPERFAMILY SSF49472 1 110 4.58E-37 T 28-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 APY29_RS02820 9d242c944b852b4bd9df233b91e7d86f 117 Pfam PF13202 EF hand 60 72 0.018 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 APY29_RS02820 9d242c944b852b4bd9df233b91e7d86f 117 Pfam PF13202 EF hand 80 103 1.6E-4 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 APY29_RS02820 9d242c944b852b4bd9df233b91e7d86f 117 Gene3D G3DSA:1.10.238.10 66 108 1.1E-7 T 28-03-2018 APY29_RS02820 9d242c944b852b4bd9df233b91e7d86f 117 Gene3D G3DSA:1.10.1330.10 19 65 0.18 T 28-03-2018 APY29_RS02820 9d242c944b852b4bd9df233b91e7d86f 117 ProSitePatterns PS00018 EF-hand calcium-binding domain. 87 99 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site APY29_RS02820 9d242c944b852b4bd9df233b91e7d86f 117 SUPERFAMILY SSF47473 55 105 3.61E-8 T 28-03-2018 IPR011992 EF-hand domain pair APY29_RS19650 63d4fa8d1466436c96aedb9ca6c75b3f 92 Pfam PF04359 Protein of unknown function (DUF493) 11 92 1.5E-20 T 28-03-2018 IPR007454 Uncharacterised protein family UPF0250 APY29_RS19650 63d4fa8d1466436c96aedb9ca6c75b3f 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 4 92 19.344 T 28-03-2018 IPR007454 Uncharacterised protein family UPF0250 APY29_RS19650 63d4fa8d1466436c96aedb9ca6c75b3f 92 Gene3D G3DSA:3.30.70.260 9 92 3.0E-19 T 28-03-2018 APY29_RS19650 63d4fa8d1466436c96aedb9ca6c75b3f 92 SUPERFAMILY SSF117991 6 92 1.26E-18 T 28-03-2018 IPR027471 YbeD-like domain APY29_RS18250 309dde3cff7edf01706b1f7fc644a986 161 Gene3D G3DSA:3.40.50.1170 1 160 7.2E-26 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 APY29_RS18250 309dde3cff7edf01706b1f7fc644a986 161 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 8.9E-6 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 APY29_RS18250 309dde3cff7edf01706b1f7fc644a986 161 PRINTS PR00139 Asparaginase/glutaminase family signature 75 93 8.9E-6 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 APY29_RS18250 309dde3cff7edf01706b1f7fc644a986 161 SUPERFAMILY SSF53774 1 156 2.75E-33 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 APY29_RS18250 309dde3cff7edf01706b1f7fc644a986 161 Pfam PF00710 Asparaginase, N-terminal 4 155 1.2E-23 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 APY29_RS01895 a68f745334a97ca87d2fc649d9829765 397 Gene3D G3DSA:3.40.1710.10 74 201 5.1E-5 T 28-03-2018 APY29_RS01895 a68f745334a97ca87d2fc649d9829765 397 Pfam PF12679 ABC-2 family transporter protein 11 362 2.1E-22 T 28-03-2018 IPR032688 ABC-2 family transporter protein GO:0006810 APY29_RS12490 02cec6f13e4f2cd152134cb50f29fbea 406 SUPERFAMILY SSF50998 43 396 1.47E-78 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APY29_RS12490 02cec6f13e4f2cd152134cb50f29fbea 406 Gene3D G3DSA:2.140.10.10 300 406 1.9E-12 T 28-03-2018 APY29_RS12490 02cec6f13e4f2cd152134cb50f29fbea 406 Gene3D G3DSA:2.140.10.10 203 299 3.2E-11 T 28-03-2018 APY29_RS12490 02cec6f13e4f2cd152134cb50f29fbea 406 Pfam PF13360 PQQ-like domain 57 114 4.3E-5 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat APY29_RS12490 02cec6f13e4f2cd152134cb50f29fbea 406 Pfam PF13360 PQQ-like domain 120 331 8.0E-44 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat APY29_RS12490 02cec6f13e4f2cd152134cb50f29fbea 406 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 6 404 38.686 T 28-03-2018 IPR017687 Outer membrane protein assembly factor BamB APY29_RS12490 02cec6f13e4f2cd152134cb50f29fbea 406 SMART SM00564 342 373 44.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS12490 02cec6f13e4f2cd152134cb50f29fbea 406 SMART SM00564 126 158 0.015 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS12490 02cec6f13e4f2cd152134cb50f29fbea 406 SMART SM00564 167 198 0.29 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS12490 02cec6f13e4f2cd152134cb50f29fbea 406 SMART SM00564 300 332 34.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS12490 02cec6f13e4f2cd152134cb50f29fbea 406 SMART SM00564 263 294 730.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS12490 02cec6f13e4f2cd152134cb50f29fbea 406 SMART SM00564 211 243 0.21 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS12490 02cec6f13e4f2cd152134cb50f29fbea 406 SMART SM00564 77 108 5.1E-5 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS12490 02cec6f13e4f2cd152134cb50f29fbea 406 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 9 403 9.2E-132 T 28-03-2018 IPR017687 Outer membrane protein assembly factor BamB APY29_RS12490 02cec6f13e4f2cd152134cb50f29fbea 406 Gene3D G3DSA:2.140.10.10 26 202 6.1E-31 T 28-03-2018 APY29_RS04360 3dec55177ddf06b889f782af8b212364 973 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 17 656 9.4E-193 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS04360 3dec55177ddf06b889f782af8b212364 973 Gene3D G3DSA:1.10.730.10 645 810 8.6E-49 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS04360 3dec55177ddf06b889f782af8b212364 973 SUPERFAMILY SSF50677 351 392 1.06E-51 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 APY29_RS04360 3dec55177ddf06b889f782af8b212364 973 SUPERFAMILY SSF50677 194 322 1.06E-51 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 APY29_RS04360 3dec55177ddf06b889f782af8b212364 973 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 1.4E-26 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 APY29_RS04360 3dec55177ddf06b889f782af8b212364 973 PRINTS PR00986 Valyl-tRNA synthetase signature 396 409 1.4E-26 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 APY29_RS04360 3dec55177ddf06b889f782af8b212364 973 PRINTS PR00986 Valyl-tRNA synthetase signature 496 517 1.4E-26 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 APY29_RS04360 3dec55177ddf06b889f782af8b212364 973 PRINTS PR00986 Valyl-tRNA synthetase signature 531 549 1.4E-26 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 APY29_RS04360 3dec55177ddf06b889f782af8b212364 973 Gene3D G3DSA:3.40.50.620 5 644 1.4E-130 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS04360 3dec55177ddf06b889f782af8b212364 973 SUPERFAMILY SSF52374 2 194 1.27E-129 T 28-03-2018 APY29_RS04360 3dec55177ddf06b889f782af8b212364 973 SUPERFAMILY SSF52374 634 666 1.27E-129 T 28-03-2018 APY29_RS04360 3dec55177ddf06b889f782af8b212364 973 SUPERFAMILY SSF52374 391 596 1.27E-129 T 28-03-2018 APY29_RS04360 3dec55177ddf06b889f782af8b212364 973 TIGRFAM TIGR00422 valS: valine--tRNA ligase 6 956 0.0 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 APY29_RS04360 3dec55177ddf06b889f782af8b212364 973 Gene3D G3DSA:1.10.287.380 902 972 2.0E-23 T 28-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 APY29_RS04360 3dec55177ddf06b889f782af8b212364 973 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS04360 3dec55177ddf06b889f782af8b212364 973 SUPERFAMILY SSF46589 909 973 9.94E-16 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 APY29_RS04360 3dec55177ddf06b889f782af8b212364 973 SUPERFAMILY SSF47323 667 923 2.24E-61 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS04360 3dec55177ddf06b889f782af8b212364 973 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 909 972 1.7E-17 T 28-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 APY29_RS04360 3dec55177ddf06b889f782af8b212364 973 Pfam PF08264 Anticodon-binding domain of tRNA 697 849 8.6E-41 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 APY29_RS04360 3dec55177ddf06b889f782af8b212364 973 Hamap MF_02004 Valine--tRNA ligase [valS]. 4 973 15.46 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 APY29_RS05680 f6ede1f018f900e0eb309a833935b9ef 305 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 65 133 1.5E-12 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 APY29_RS05680 f6ede1f018f900e0eb309a833935b9ef 305 SUPERFAMILY SSF75217 144 298 3.79E-31 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases APY29_RS05680 f6ede1f018f900e0eb309a833935b9ef 305 SUPERFAMILY SSF55315 60 133 1.41E-11 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like APY29_RS05680 f6ede1f018f900e0eb309a833935b9ef 305 Gene3D G3DSA:3.40.1280.10 144 300 1.1E-31 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APY29_RS05680 f6ede1f018f900e0eb309a833935b9ef 305 Pfam PF00588 SpoU rRNA Methylase family 155 292 7.8E-29 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APY29_RS05680 f6ede1f018f900e0eb309a833935b9ef 305 SMART SM00967 64 139 2.4E-12 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 APY29_RS05680 f6ede1f018f900e0eb309a833935b9ef 305 Gene3D G3DSA:3.30.1330.30 52 134 6.1E-13 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like APY29_RS18760 5f80977e3a39f7401d1cf01186a24efb 222 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 44 204 1.7E-19 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain APY29_RS18760 5f80977e3a39f7401d1cf01186a24efb 222 SUPERFAMILY SSF52266 42 220 1.1E-45 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain APY29_RS18760 5f80977e3a39f7401d1cf01186a24efb 222 Gene3D G3DSA:3.40.50.1110 39 222 6.4E-34 T 28-03-2018 APY29_RS22955 4f51958dc8db7be5580052a66e51f8b6 197 SUPERFAMILY SSF48613 11 191 2.72E-46 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 APY29_RS22955 4f51958dc8db7be5580052a66e51f8b6 197 Pfam PF01126 Heme oxygenase 13 65 5.1E-5 T 28-03-2018 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 APY29_RS22955 4f51958dc8db7be5580052a66e51f8b6 197 Gene3D G3DSA:1.20.910.10 4 193 2.3E-30 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 APY29_RS17265 141b38809fd75369b6fe3094470d81f6 299 SUPERFAMILY SSF49493 205 287 8.11E-16 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APY29_RS17265 141b38809fd75369b6fe3094470d81f6 299 Pfam PF01556 DnaJ C terminal domain 143 276 7.0E-25 T 28-03-2018 IPR002939 Chaperone DnaJ, C-terminal APY29_RS17265 141b38809fd75369b6fe3094470d81f6 299 PRINTS PR00625 DnaJ domain signature 25 40 1.2E-21 T 28-03-2018 IPR001623 DnaJ domain APY29_RS17265 141b38809fd75369b6fe3094470d81f6 299 PRINTS PR00625 DnaJ domain signature 41 61 1.2E-21 T 28-03-2018 IPR001623 DnaJ domain APY29_RS17265 141b38809fd75369b6fe3094470d81f6 299 PRINTS PR00625 DnaJ domain signature 61 80 1.2E-21 T 28-03-2018 IPR001623 DnaJ domain APY29_RS17265 141b38809fd75369b6fe3094470d81f6 299 PRINTS PR00625 DnaJ domain signature 7 25 1.2E-21 T 28-03-2018 IPR001623 DnaJ domain APY29_RS17265 141b38809fd75369b6fe3094470d81f6 299 Gene3D G3DSA:2.60.260.20 138 197 1.7E-12 T 28-03-2018 APY29_RS17265 141b38809fd75369b6fe3094470d81f6 299 Pfam PF00226 DnaJ domain 5 66 7.1E-24 T 28-03-2018 IPR001623 DnaJ domain APY29_RS17265 141b38809fd75369b6fe3094470d81f6 299 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 28-03-2018 IPR018253 DnaJ domain, conserved site APY29_RS17265 141b38809fd75369b6fe3094470d81f6 299 SUPERFAMILY SSF46565 1 106 1.44E-30 T 28-03-2018 IPR001623 DnaJ domain APY29_RS17265 141b38809fd75369b6fe3094470d81f6 299 Gene3D G3DSA:2.60.260.20 200 298 6.2E-18 T 28-03-2018 APY29_RS17265 141b38809fd75369b6fe3094470d81f6 299 SMART SM00271 4 61 2.4E-26 T 28-03-2018 IPR001623 DnaJ domain APY29_RS17265 141b38809fd75369b6fe3094470d81f6 299 Gene3D G3DSA:1.10.287.110 1 124 1.4E-31 T 28-03-2018 IPR001623 DnaJ domain APY29_RS17265 141b38809fd75369b6fe3094470d81f6 299 SUPERFAMILY SSF49493 137 212 7.98E-12 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APY29_RS23020 2809f854ae73a459657966eed7c4f189 486 Gene3D G3DSA:1.20.1600.10 21 478 2.2E-79 T 28-03-2018 APY29_RS23020 2809f854ae73a459657966eed7c4f189 486 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 14 472 3.1E-89 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APY29_RS23020 2809f854ae73a459657966eed7c4f189 486 SUPERFAMILY SSF56954 63 475 4.84E-88 T 28-03-2018 APY29_RS23020 2809f854ae73a459657966eed7c4f189 486 SUPERFAMILY SSF56954 6 31 4.84E-88 T 28-03-2018 APY29_RS23020 2809f854ae73a459657966eed7c4f189 486 Pfam PF02321 Outer membrane efflux protein 293 470 5.1E-23 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS23020 2809f854ae73a459657966eed7c4f189 486 Pfam PF02321 Outer membrane efflux protein 72 262 6.0E-15 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS11945 65c61d186094eb0603098d5966adca64 98 Gene3D G3DSA:2.40.50.140 2 88 7.4E-24 T 28-03-2018 APY29_RS11945 65c61d186094eb0603098d5966adca64 98 SUPERFAMILY SSF50249 1 88 1.25E-22 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS11945 65c61d186094eb0603098d5966adca64 98 Pfam PF02303 Helix-destabilising protein 4 82 2.8E-8 T 28-03-2018 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 APY29_RS17255 270e6f0eecaf9d089a1cb82bf554219f 375 Pfam PF01145 SPFH domain / Band 7 family 68 239 7.2E-31 T 28-03-2018 IPR001107 Band 7 domain APY29_RS17255 270e6f0eecaf9d089a1cb82bf554219f 375 SMART SM00244 63 223 6.1E-35 T 28-03-2018 IPR001107 Band 7 domain APY29_RS17255 270e6f0eecaf9d089a1cb82bf554219f 375 SUPERFAMILY SSF117892 96 230 5.75E-20 T 28-03-2018 IPR001107 Band 7 domain APY29_RS17255 270e6f0eecaf9d089a1cb82bf554219f 375 TIGRFAM TIGR01933 hflK: HflK protein 65 321 1.5E-99 T 28-03-2018 IPR010201 HflK GO:0016021 APY29_RS17255 270e6f0eecaf9d089a1cb82bf554219f 375 PRINTS PR00721 Stomatin signature 153 170 1.4E-10 T 28-03-2018 IPR001972 Stomatin family GO:0016020 APY29_RS17255 270e6f0eecaf9d089a1cb82bf554219f 375 PRINTS PR00721 Stomatin signature 199 217 1.4E-10 T 28-03-2018 IPR001972 Stomatin family GO:0016020 APY29_RS17255 270e6f0eecaf9d089a1cb82bf554219f 375 PRINTS PR00721 Stomatin signature 118 139 1.4E-10 T 28-03-2018 IPR001972 Stomatin family GO:0016020 APY29_RS17255 270e6f0eecaf9d089a1cb82bf554219f 375 PRINTS PR00721 Stomatin signature 70 92 1.4E-10 T 28-03-2018 IPR001972 Stomatin family GO:0016020 APY29_RS12030 0301cc8dd38ee521c1ea347092bdf6ce 340 SUPERFAMILY SSF55874 216 330 7.86E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS12030 0301cc8dd38ee521c1ea347092bdf6ce 340 Gene3D G3DSA:3.30.565.10 207 336 4.9E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS12030 0301cc8dd38ee521c1ea347092bdf6ce 340 Pfam PF06580 Histidine kinase 153 232 5.2E-16 T 28-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 APY29_RS12445 d1580b25094e07bc10e8d8e7ee037461 190 Pfam PF13628 Domain of unknown function (DUF4142) 46 180 4.3E-28 T 28-03-2018 IPR025419 Domain of unknown function DUF4142 APY29_RS12445 d1580b25094e07bc10e8d8e7ee037461 190 Gene3D G3DSA:1.20.1260.10 33 183 1.4E-14 T 28-03-2018 IPR012347 Ferritin-related APY29_RS18010 bdc6ff9c112b137ea417084d4c0ce2e4 89 Gene3D G3DSA:2.40.50.140 9 89 4.5E-30 T 28-03-2018 APY29_RS18010 bdc6ff9c112b137ea417084d4c0ce2e4 89 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 11 81 9.0E-36 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18010 bdc6ff9c112b137ea417084d4c0ce2e4 89 SUPERFAMILY SSF50249 11 86 4.2E-31 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS18010 bdc6ff9c112b137ea417084d4c0ce2e4 89 Pfam PF00366 Ribosomal protein S17 15 82 6.5E-32 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18010 bdc6ff9c112b137ea417084d4c0ce2e4 89 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 11 81 1.6E-34 T 28-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18010 bdc6ff9c112b137ea417084d4c0ce2e4 89 PRINTS PR00973 Ribosomal protein S17 family signature 61 71 5.4E-11 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18010 bdc6ff9c112b137ea417084d4c0ce2e4 89 PRINTS PR00973 Ribosomal protein S17 family signature 29 52 5.4E-11 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18010 bdc6ff9c112b137ea417084d4c0ce2e4 89 PRINTS PR00973 Ribosomal protein S17 family signature 71 78 5.4E-11 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18010 bdc6ff9c112b137ea417084d4c0ce2e4 89 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 85 23.631 T 28-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS20995 7615cd1ec3c4ec5eabd51d8439aa4941 542 Gene3D G3DSA:3.30.70.270 369 542 2.2E-45 T 28-03-2018 APY29_RS20995 7615cd1ec3c4ec5eabd51d8439aa4941 542 Pfam PF00990 Diguanylate cyclase, GGDEF domain 384 537 5.6E-35 T 28-03-2018 IPR000160 GGDEF domain APY29_RS20995 7615cd1ec3c4ec5eabd51d8439aa4941 542 SMART SM00267 370 541 5.6E-43 T 28-03-2018 IPR000160 GGDEF domain APY29_RS20995 7615cd1ec3c4ec5eabd51d8439aa4941 542 SUPERFAMILY SSF55073 386 539 2.43E-42 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS20995 7615cd1ec3c4ec5eabd51d8439aa4941 542 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 383 540 6.9E-39 T 28-03-2018 IPR000160 GGDEF domain APY29_RS01380 561f001742f9528455da6096d4ed94e1 167 Gene3D G3DSA:2.30.110.20 1 163 1.4E-35 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp APY29_RS01380 561f001742f9528455da6096d4ed94e1 167 SUPERFAMILY SSF141452 2 162 1.57E-38 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp APY29_RS01380 561f001742f9528455da6096d4ed94e1 167 Pfam PF05638 Type VI secretion system effector, Hcp 12 139 1.2E-26 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp APY29_RS20250 5c5329300fc777f37b8bf63fd2b79cf0 234 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 6 229 8.3E-90 T 28-03-2018 APY29_RS20250 5c5329300fc777f37b8bf63fd2b79cf0 234 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 3 231 1.7E-80 T 28-03-2018 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 APY29_RS20250 5c5329300fc777f37b8bf63fd2b79cf0 234 Gene3D G3DSA:3.90.226.10 2 203 1.9E-19 T 28-03-2018 APY29_RS20250 5c5329300fc777f37b8bf63fd2b79cf0 234 SUPERFAMILY SSF52096 13 205 4.26E-19 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS18900 e6f171fbfb8294cd7c1d4baae3f89b77 904 Pfam PF00311 Phosphoenolpyruvate carboxylase 142 904 9.7E-223 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APY29_RS18900 e6f171fbfb8294cd7c1d4baae3f89b77 904 Gene3D G3DSA:3.20.20.60 400 642 8.5E-5 T 28-03-2018 APY29_RS18900 e6f171fbfb8294cd7c1d4baae3f89b77 904 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 561 573 - T 28-03-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APY29_RS18900 e6f171fbfb8294cd7c1d4baae3f89b77 904 Gene3D G3DSA:1.20.1440.90 286 399 5.0E-16 T 28-03-2018 APY29_RS18900 e6f171fbfb8294cd7c1d4baae3f89b77 904 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 147 158 - T 28-03-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APY29_RS18900 e6f171fbfb8294cd7c1d4baae3f89b77 904 SUPERFAMILY SSF51621 18 904 3.3E-260 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APY29_RS18900 e6f171fbfb8294cd7c1d4baae3f89b77 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 404 424 3.8E-51 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APY29_RS18900 e6f171fbfb8294cd7c1d4baae3f89b77 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 601 630 3.8E-51 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APY29_RS18900 e6f171fbfb8294cd7c1d4baae3f89b77 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 257 272 3.8E-51 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APY29_RS18900 e6f171fbfb8294cd7c1d4baae3f89b77 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 146 159 3.8E-51 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APY29_RS18900 e6f171fbfb8294cd7c1d4baae3f89b77 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 559 579 3.8E-51 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APY29_RS18900 e6f171fbfb8294cd7c1d4baae3f89b77 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 735 761 3.8E-51 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APY29_RS18900 e6f171fbfb8294cd7c1d4baae3f89b77 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 199 215 3.8E-51 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APY29_RS18900 e6f171fbfb8294cd7c1d4baae3f89b77 904 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 10 904 17.263 T 28-03-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APY29_RS17995 d8a59cdb96638f9a5058a7ee8c50ee16 180 Pfam PF00281 Ribosomal protein L5 25 81 1.2E-27 T 28-03-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS17995 d8a59cdb96638f9a5058a7ee8c50ee16 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 28-03-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS17995 d8a59cdb96638f9a5058a7ee8c50ee16 180 SUPERFAMILY SSF55282 4 180 5.89E-77 T 28-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS17995 d8a59cdb96638f9a5058a7ee8c50ee16 180 Pfam PF00673 ribosomal L5P family C-terminus 85 178 9.4E-40 T 28-03-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS17995 d8a59cdb96638f9a5058a7ee8c50ee16 180 PIRSF PIRSF002161 1 180 1.1E-65 T 28-03-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS17995 d8a59cdb96638f9a5058a7ee8c50ee16 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 43.195 T 28-03-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS17995 d8a59cdb96638f9a5058a7ee8c50ee16 180 Gene3D G3DSA:3.30.1440.10 1 180 6.8E-77 T 28-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS14210 c1c7dacf808d2d60a5b2c79e1e03a6f0 391 Gene3D G3DSA:2.30.40.10 1 49 6.3E-7 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS14210 c1c7dacf808d2d60a5b2c79e1e03a6f0 391 Gene3D G3DSA:3.20.20.140 164 314 1.1E-20 T 28-03-2018 APY29_RS14210 c1c7dacf808d2d60a5b2c79e1e03a6f0 391 SUPERFAMILY SSF51338 298 339 1.3E-9 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS14210 c1c7dacf808d2d60a5b2c79e1e03a6f0 391 SUPERFAMILY SSF51338 3 52 1.3E-9 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS14210 c1c7dacf808d2d60a5b2c79e1e03a6f0 391 SUPERFAMILY SSF51556 51 294 2.55E-27 T 28-03-2018 IPR032466 Metal-dependent hydrolase APY29_RS14210 c1c7dacf808d2d60a5b2c79e1e03a6f0 391 Gene3D G3DSA:3.20.20.140 50 163 7.3E-4 T 28-03-2018 APY29_RS14210 c1c7dacf808d2d60a5b2c79e1e03a6f0 391 Pfam PF01979 Amidohydrolase family 157 337 7.6E-10 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 APY29_RS13825 8903ceee8711746e4b7a62d33e5e44ba 751 Gene3D G3DSA:2.130.10.10 57 436 4.6E-64 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS13825 8903ceee8711746e4b7a62d33e5e44ba 751 SUPERFAMILY SSF110296 434 749 2.09E-32 T 28-03-2018 APY29_RS13825 8903ceee8711746e4b7a62d33e5e44ba 751 SUPERFAMILY SSF110296 47 428 3.01E-75 T 28-03-2018 APY29_RS13825 8903ceee8711746e4b7a62d33e5e44ba 751 Gene3D G3DSA:2.130.10.10 437 751 4.2E-49 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS20845 dcf145c6c4b59fb5abb6b1d7444fdf84 130 SUPERFAMILY SSF52980 9 123 6.43E-26 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 APY29_RS20845 dcf145c6c4b59fb5abb6b1d7444fdf84 130 Pfam PF04480 Protein of unknown function (DUF559) 12 114 2.2E-40 T 28-03-2018 IPR007569 Domain of unknown function DUF559 APY29_RS20845 dcf145c6c4b59fb5abb6b1d7444fdf84 130 Gene3D G3DSA:3.40.960.10 22 120 2.5E-26 T 28-03-2018 APY29_RS18185 435cfb7fe8255bbc0fe4ee1be7f6555d 562 Pfam PF14559 Tetratricopeptide repeat 223 285 3.0E-7 T 28-03-2018 APY29_RS18185 435cfb7fe8255bbc0fe4ee1be7f6555d 562 SUPERFAMILY SSF48452 383 551 4.93E-26 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS18185 435cfb7fe8255bbc0fe4ee1be7f6555d 562 Gene3D G3DSA:1.25.40.10 375 476 6.1E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS18185 435cfb7fe8255bbc0fe4ee1be7f6555d 562 SUPERFAMILY SSF48452 310 367 1.57E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS18185 435cfb7fe8255bbc0fe4ee1be7f6555d 562 SUPERFAMILY SSF48452 174 278 1.57E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS18185 435cfb7fe8255bbc0fe4ee1be7f6555d 562 Gene3D G3DSA:1.25.40.10 477 560 2.3E-16 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS18185 435cfb7fe8255bbc0fe4ee1be7f6555d 562 SMART SM00028 177 210 91.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS18185 435cfb7fe8255bbc0fe4ee1be7f6555d 562 SMART SM00028 449 483 240.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS18185 435cfb7fe8255bbc0fe4ee1be7f6555d 562 SMART SM00028 381 414 240.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS18185 435cfb7fe8255bbc0fe4ee1be7f6555d 562 SMART SM00028 517 550 1.5 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS18185 435cfb7fe8255bbc0fe4ee1be7f6555d 562 SMART SM00028 415 448 6.8 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS18185 435cfb7fe8255bbc0fe4ee1be7f6555d 562 Gene3D G3DSA:1.25.40.10 224 323 1.6E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS18185 435cfb7fe8255bbc0fe4ee1be7f6555d 562 Gene3D G3DSA:1.25.40.10 44 223 1.5E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS18185 435cfb7fe8255bbc0fe4ee1be7f6555d 562 Pfam PF13181 Tetratricopeptide repeat 314 334 0.12 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS18185 435cfb7fe8255bbc0fe4ee1be7f6555d 562 Gene3D G3DSA:1.25.40.10 324 374 0.0018 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS18185 435cfb7fe8255bbc0fe4ee1be7f6555d 562 Pfam PF13432 Tetratricopeptide repeat 423 484 1.0E-4 T 28-03-2018 APY29_RS18185 435cfb7fe8255bbc0fe4ee1be7f6555d 562 Pfam PF13432 Tetratricopeptide repeat 492 550 0.018 T 28-03-2018 APY29_RS01365 13a755a25b9e716f4c35e4bdea349d3c 223 Gene3D G3DSA:2.60.120.10 20 101 0.0036 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS01365 13a755a25b9e716f4c35e4bdea349d3c 223 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 97 140 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APY29_RS01365 13a755a25b9e716f4c35e4bdea349d3c 223 SUPERFAMILY SSF46689 97 150 1.16E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS01365 13a755a25b9e716f4c35e4bdea349d3c 223 SMART SM00342 62 144 1.9E-9 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS01365 13a755a25b9e716f4c35e4bdea349d3c 223 Pfam PF12833 Helix-turn-helix domain 70 146 1.6E-14 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS01365 13a755a25b9e716f4c35e4bdea349d3c 223 Gene3D G3DSA:1.10.10.60 102 154 1.0E-15 T 28-03-2018 APY29_RS06955 037aca0dbc6e35ec52d7d76c7381e24a 79 Gene3D G3DSA:3.40.30.10 1 79 2.9E-9 T 28-03-2018 APY29_RS06955 037aca0dbc6e35ec52d7d76c7381e24a 79 Pfam PF05768 Glutaredoxin-like domain (DUF836) 3 72 1.1E-12 T 28-03-2018 IPR008554 Glutaredoxin-like APY29_RS06955 037aca0dbc6e35ec52d7d76c7381e24a 79 SUPERFAMILY SSF52833 3 74 1.62E-14 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS03980 d01f67f74308e1cac704d7585d4878ea 174 SUPERFAMILY SSF54593 21 172 3.62E-32 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS03980 d01f67f74308e1cac704d7585d4878ea 174 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 17 171 5.6E-43 T 28-03-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 APY29_RS03980 d01f67f74308e1cac704d7585d4878ea 174 ProSitePatterns PS00934 Glyoxalase I signature 1. 26 47 - T 28-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 APY29_RS03980 d01f67f74308e1cac704d7585d4878ea 174 Gene3D G3DSA:3.10.180.10 18 172 2.3E-31 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS03980 d01f67f74308e1cac704d7585d4878ea 174 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 24 167 1.8E-22 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APY29_RS03700 52599bd594cf46460ffbfdd3afb912ac 445 Gene3D G3DSA:2.120.10.30 331 444 9.6E-14 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS03700 52599bd594cf46460ffbfdd3afb912ac 445 Gene3D G3DSA:2.120.10.30 57 330 1.1E-37 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS03700 52599bd594cf46460ffbfdd3afb912ac 445 Pfam PF07995 Glucose / Sorbosone dehydrogenase 179 369 1.7E-12 T 28-03-2018 IPR012938 Glucose/Sorbosone dehydrogenase APY29_RS03700 52599bd594cf46460ffbfdd3afb912ac 445 SUPERFAMILY SSF50952 133 443 5.36E-34 T 28-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 APY29_RS03700 52599bd594cf46460ffbfdd3afb912ac 445 SUPERFAMILY SSF50952 69 100 5.36E-34 T 28-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 APY29_RS06120 305aee3ef5343552239a59616a68a70f 304 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 304 102.688 T 28-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 APY29_RS06120 305aee3ef5343552239a59616a68a70f 304 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 4 279 3.0E-59 T 28-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 APY29_RS06120 305aee3ef5343552239a59616a68a70f 304 Pfam PF03186 CobD/Cbib protein 8 284 1.9E-91 T 28-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 APY29_RS03175 0678159cb2700bbb1353ded24686d4ec 626 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 320 400 1.1E-10 T 28-03-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain APY29_RS03175 0678159cb2700bbb1353ded24686d4ec 626 Gene3D G3DSA:1.10.10.10 420 489 0.011 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS03175 0678159cb2700bbb1353ded24686d4ec 626 Pfam PF04326 Putative DNA-binding domain 14 135 2.3E-14 T 28-03-2018 IPR007421 Schlafen, AAA domain GO:0005524 APY29_RS03175 0678159cb2700bbb1353ded24686d4ec 626 Gene3D G3DSA:1.10.10.10 521 614 0.47 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS23270 befec5852bede7a970424a551c90ab1a 132 Pfam PF10947 Protein of unknown function (DUF2628) 13 115 2.7E-20 T 28-03-2018 IPR024399 Protein of unknown function DUF2628 APY29_RS23270 befec5852bede7a970424a551c90ab1a 132 ProDom PD031864 YIGF SIMILAR ESCHERICHIA COLI MEMBRANE XCC4223 XAC4357 XAC2195 9 125 1.0E-36 T 28-03-2018 APY29_RS01905 050a82324058d3e2ef442aa0e43fb166 521 PIRSF PIRSF011396 9 502 5.0E-185 T 28-03-2018 IPR033856 Flavin-dependent tryptophan halogenase APY29_RS01905 050a82324058d3e2ef442aa0e43fb166 521 Gene3D G3DSA:3.50.50.60 9 365 1.2E-32 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS01905 050a82324058d3e2ef442aa0e43fb166 521 SUPERFAMILY SSF51905 325 425 3.31E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS01905 050a82324058d3e2ef442aa0e43fb166 521 SUPERFAMILY SSF51905 142 240 3.31E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS01905 050a82324058d3e2ef442aa0e43fb166 521 SUPERFAMILY SSF51905 15 98 3.31E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS01905 050a82324058d3e2ef442aa0e43fb166 521 Pfam PF04820 Tryptophan halogenase 16 465 2.8E-189 T 28-03-2018 IPR006905 Flavin-dependent halogenase APY29_RS20840 495d3d2e6844375b64a4f0beebfcf7cd 458 Gene3D G3DSA:2.60.120.10 296 419 3.8E-53 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS20840 495d3d2e6844375b64a4f0beebfcf7cd 458 Gene3D G3DSA:2.60.120.10 217 257 1.2E-9 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS20840 495d3d2e6844375b64a4f0beebfcf7cd 458 Pfam PF04209 homogentisate 1,2-dioxygenase 27 449 2.4E-205 T 28-03-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 APY29_RS20840 495d3d2e6844375b64a4f0beebfcf7cd 458 SUPERFAMILY SSF51182 25 452 1.39E-173 T 28-03-2018 IPR011051 RmlC-like cupin domain APY29_RS20840 495d3d2e6844375b64a4f0beebfcf7cd 458 Hamap MF_00334 Homogentisate 1,2-dioxygenase [hmgA]. 27 451 71.325 T 28-03-2018 IPR022950 Homogentisate 1,2-dioxygenase, bacterial GO:0004411|GO:0006559|GO:0006572|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5 APY29_RS20840 495d3d2e6844375b64a4f0beebfcf7cd 458 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 26 449 2.0E-203 T 28-03-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 APY29_RS17940 6c41adadd24d2bdeb4003276a68674fa 208 SMART SM00363 97 161 1.5E-16 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS17940 6c41adadd24d2bdeb4003276a68674fa 208 Pfam PF01479 S4 domain 98 144 6.2E-18 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS17940 6c41adadd24d2bdeb4003276a68674fa 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 96 4.4E-31 T 28-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 APY29_RS17940 6c41adadd24d2bdeb4003276a68674fa 208 Gene3D G3DSA:1.10.1050.10 146 208 2.3E-15 T 28-03-2018 APY29_RS17940 6c41adadd24d2bdeb4003276a68674fa 208 SMART SM01390 3 96 6.4E-48 T 28-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 APY29_RS17940 6c41adadd24d2bdeb4003276a68674fa 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 34.661 T 28-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 APY29_RS17940 6c41adadd24d2bdeb4003276a68674fa 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 4.6E-77 T 28-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 APY29_RS17940 6c41adadd24d2bdeb4003276a68674fa 208 Gene3D G3DSA:3.10.290.10 103 145 7.5E-14 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS17940 6c41adadd24d2bdeb4003276a68674fa 208 SUPERFAMILY SSF55174 2 208 6.15E-65 T 28-03-2018 APY29_RS17940 6c41adadd24d2bdeb4003276a68674fa 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 95 119 - T 28-03-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS17940 6c41adadd24d2bdeb4003276a68674fa 208 Gene3D G3DSA:1.10.1050.10 1 102 1.2E-42 T 28-03-2018 APY29_RS10500 20b35ffd477135e98b48d074ebcf925e 267 Gene3D G3DSA:3.60.110.10 1 266 5.1E-58 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APY29_RS10500 20b35ffd477135e98b48d074ebcf925e 267 SUPERFAMILY SSF56317 2 260 6.93E-58 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APY29_RS10500 20b35ffd477135e98b48d074ebcf925e 267 Pfam PF00795 Carbon-nitrogen hydrolase 7 245 3.4E-28 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APY29_RS17390 1b72c1db9497daf81f2a1f444fb4a836 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 4.5E-36 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 APY29_RS17390 1b72c1db9497daf81f2a1f444fb4a836 79 SUPERFAMILY SSF47336 2 77 1.57E-23 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain APY29_RS17390 1b72c1db9497daf81f2a1f444fb4a836 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site APY29_RS17390 1b72c1db9497daf81f2a1f444fb4a836 79 Gene3D G3DSA:1.10.1200.10 1 79 3.6E-27 T 28-03-2018 APY29_RS17390 1b72c1db9497daf81f2a1f444fb4a836 79 Pfam PF00550 Phosphopantetheine attachment site 6 73 3.6E-16 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain APY29_RS17390 1b72c1db9497daf81f2a1f444fb4a836 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 8.0E-4 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 APY29_RS17390 1b72c1db9497daf81f2a1f444fb4a836 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.661 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 APY29_RS21755 8acc91db1e8f4d62e9fbd738b3b6b407 342 Pfam PF16884 N-terminal domain of oxidoreductase 7 109 2.6E-35 T 28-03-2018 APY29_RS21755 8acc91db1e8f4d62e9fbd738b3b6b407 342 Gene3D G3DSA:3.40.50.720 152 283 6.5E-28 T 28-03-2018 APY29_RS21755 8acc91db1e8f4d62e9fbd738b3b6b407 342 SMART SM00829 20 339 1.5E-6 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APY29_RS21755 8acc91db1e8f4d62e9fbd738b3b6b407 342 Pfam PF00107 Zinc-binding dehydrogenase 161 298 7.5E-18 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APY29_RS21755 8acc91db1e8f4d62e9fbd738b3b6b407 342 SUPERFAMILY SSF50129 5 146 3.59E-39 T 28-03-2018 IPR011032 GroES-like APY29_RS21755 8acc91db1e8f4d62e9fbd738b3b6b407 342 SUPERFAMILY SSF51735 127 305 6.37E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS21755 8acc91db1e8f4d62e9fbd738b3b6b407 342 Gene3D G3DSA:3.90.180.10 1 151 3.0E-34 T 28-03-2018 APY29_RS09485 3f0fdffe8e911b213a259e6344a0c72d 207 SUPERFAMILY SSF53335 15 192 2.07E-43 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS09485 3f0fdffe8e911b213a259e6344a0c72d 207 Gene3D G3DSA:3.40.50.150 4 202 2.0E-34 T 28-03-2018 APY29_RS09485 3f0fdffe8e911b213a259e6344a0c72d 207 PIRSF PIRSF004553 15 194 2.1E-43 T 28-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 APY29_RS09485 3f0fdffe8e911b213a259e6344a0c72d 207 Pfam PF03602 Conserved hypothetical protein 95 16 191 3.0E-51 T 28-03-2018 APY29_RS09485 3f0fdffe8e911b213a259e6344a0c72d 207 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 14 192 4.1E-42 T 28-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 APY29_RS23560 fadd2d2043f8301c0152d11e25198868 203 ProSitePatterns PS00398 Site-specific recombinases signature 2. 75 87 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 APY29_RS23560 fadd2d2043f8301c0152d11e25198868 203 Pfam PF00239 Resolvase, N terminal domain 33 155 2.4E-38 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APY29_RS23560 fadd2d2043f8301c0152d11e25198868 203 SUPERFAMILY SSF53041 32 156 2.22E-38 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APY29_RS23560 fadd2d2043f8301c0152d11e25198868 203 Gene3D G3DSA:3.40.50.1390 29 124 1.2E-26 T 28-03-2018 APY29_RS23560 fadd2d2043f8301c0152d11e25198868 203 SMART SM00857 32 156 9.5E-45 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APY29_RS23560 fadd2d2043f8301c0152d11e25198868 203 Gene3D G3DSA:1.10.10.60 157 201 9.4E-5 T 28-03-2018 APY29_RS23560 fadd2d2043f8301c0152d11e25198868 203 Gene3D G3DSA:1.20.5.40 125 154 1.9E-17 T 28-03-2018 APY29_RS04165 9a0325e6ea9c5d1752d98b2110b5b443 346 SUPERFAMILY SSF51735 4 338 1.11E-73 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS04165 9a0325e6ea9c5d1752d98b2110b5b443 346 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 4 342 52.307 T 28-03-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 APY29_RS04165 9a0325e6ea9c5d1752d98b2110b5b443 346 Gene3D G3DSA:3.40.50.720 1 202 7.7E-24 T 28-03-2018 APY29_RS04165 9a0325e6ea9c5d1752d98b2110b5b443 346 Gene3D G3DSA:3.90.25.10 203 244 7.2E-21 T 28-03-2018 APY29_RS04165 9a0325e6ea9c5d1752d98b2110b5b443 346 Gene3D G3DSA:3.90.25.10 245 343 1.9E-27 T 28-03-2018 APY29_RS04165 9a0325e6ea9c5d1752d98b2110b5b443 346 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 4 338 8.2E-143 T 28-03-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 APY29_RS04165 9a0325e6ea9c5d1752d98b2110b5b443 346 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 332 1.6E-134 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS17670 82f9fadb1a2b09e7700a24b3bc7d3a49 229 SMART SM00862 150 225 6.1E-28 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS17670 82f9fadb1a2b09e7700a24b3bc7d3a49 229 Pfam PF00072 Response regulator receiver domain 5 117 6.3E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS17670 82f9fadb1a2b09e7700a24b3bc7d3a49 229 SMART SM00448 3 116 1.2E-41 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS17670 82f9fadb1a2b09e7700a24b3bc7d3a49 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 2 226 2.1E-112 T 28-03-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 APY29_RS17670 82f9fadb1a2b09e7700a24b3bc7d3a49 229 Gene3D G3DSA:1.10.10.10 127 229 9.7E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS17670 82f9fadb1a2b09e7700a24b3bc7d3a49 229 SUPERFAMILY SSF52172 3 125 6.4E-42 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS17670 82f9fadb1a2b09e7700a24b3bc7d3a49 229 Gene3D G3DSA:3.40.50.2300 1 126 9.3E-37 T 28-03-2018 APY29_RS17670 82f9fadb1a2b09e7700a24b3bc7d3a49 229 SUPERFAMILY SSF46894 127 225 1.87E-29 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS17670 82f9fadb1a2b09e7700a24b3bc7d3a49 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.5E-25 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS19185 aef4f43b48c61e915544bb867f0f2b5b 445 SUPERFAMILY SSF81383 36 74 1.96E-5 T 28-03-2018 IPR001810 F-box domain GO:0005515 APY29_RS19185 aef4f43b48c61e915544bb867f0f2b5b 445 Gene3D G3DSA:1.20.1280.50 40 125 6.1E-4 T 28-03-2018 APY29_RS19185 aef4f43b48c61e915544bb867f0f2b5b 445 Pfam PF00646 F-box domain 42 71 1.4E-4 T 28-03-2018 IPR001810 F-box domain GO:0005515 APY29_RS17365 04ebb28abf5df4a781fc9caca3b460a9 117 Gene3D G3DSA:2.40.10.220 31 107 2.3E-6 T 28-03-2018 APY29_RS17365 04ebb28abf5df4a781fc9caca3b460a9 117 Pfam PF07238 PilZ domain 15 104 8.5E-10 T 28-03-2018 IPR009875 PilZ domain GO:0035438 APY29_RS03250 48fbf59815c834a55b7015673829f118 76 Gene3D G3DSA:2.30.30.320 9 76 3.4E-23 T 28-03-2018 IPR023387 DUF1653-like domain APY29_RS03250 48fbf59815c834a55b7015673829f118 76 Pfam PF07866 Protein of unknown function (DUF1653) 15 73 9.7E-25 T 28-03-2018 IPR023387 DUF1653-like domain APY29_RS13815 c66ea200c517fb10dddf5653721ceca2 556 Pfam PF02449 Beta-galactosidase 89 232 3.7E-6 T 28-03-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APY29_RS13815 c66ea200c517fb10dddf5653721ceca2 556 Gene3D G3DSA:3.20.20.80 45 416 2.5E-69 T 28-03-2018 APY29_RS13815 c66ea200c517fb10dddf5653721ceca2 556 SUPERFAMILY SSF51445 69 392 6.45E-39 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS13815 c66ea200c517fb10dddf5653721ceca2 556 Gene3D G3DSA:2.60.220.20 418 555 9.2E-37 T 28-03-2018 APY29_RS19865 1a4f3e77e9c234d0c9ddcd2f6a982f18 321 Pfam PF08279 HTH domain 6 61 3.4E-12 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 APY29_RS19865 1a4f3e77e9c234d0c9ddcd2f6a982f18 321 Gene3D G3DSA:1.10.10.10 1 65 3.9E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS19865 1a4f3e77e9c234d0c9ddcd2f6a982f18 321 SUPERFAMILY SSF46785 2 47 2.18E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS19865 1a4f3e77e9c234d0c9ddcd2f6a982f18 321 Pfam PF13280 WYL domain 144 313 1.4E-38 T 28-03-2018 IPR026881 WYL domain APY29_RS07665 2ad05abb150b485389c805d01132f4a6 735 Gene3D G3DSA:3.90.1170.50 4 137 2.8E-27 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APY29_RS07665 2ad05abb150b485389c805d01132f4a6 735 SMART SM01008 32 138 4.8E-26 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APY29_RS07665 2ad05abb150b485389c805d01132f4a6 735 SUPERFAMILY SSF56003 157 731 2.09E-164 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APY29_RS07665 2ad05abb150b485389c805d01132f4a6 735 Gene3D G3DSA:3.30.365.10 261 418 4.9E-32 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APY29_RS07665 2ad05abb150b485389c805d01132f4a6 735 Gene3D G3DSA:3.30.365.10 561 732 1.1E-46 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APY29_RS07665 2ad05abb150b485389c805d01132f4a6 735 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 162 669 3.2E-121 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APY29_RS07665 2ad05abb150b485389c805d01132f4a6 735 Gene3D G3DSA:3.30.365.10 162 260 1.1E-31 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APY29_RS07665 2ad05abb150b485389c805d01132f4a6 735 Gene3D G3DSA:3.30.365.10 440 560 3.3E-26 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APY29_RS07665 2ad05abb150b485389c805d01132f4a6 735 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 32 135 9.1E-20 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APY29_RS07665 2ad05abb150b485389c805d01132f4a6 735 SUPERFAMILY SSF54665 12 153 4.06E-31 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APY29_RS11100 ab5f38303db34b2dffc468610dd78b18 131 PIRSF PIRSF000178 1 125 1.9E-37 T 28-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APY29_RS11100 ab5f38303db34b2dffc468610dd78b18 131 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 5 122 1.4E-35 T 28-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APY29_RS11100 ab5f38303db34b2dffc468610dd78b18 131 Gene3D G3DSA:1.20.5.540 4 13 0.0013 T 28-03-2018 APY29_RS11100 ab5f38303db34b2dffc468610dd78b18 131 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 4 119 1.5E-21 T 28-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APY29_RS11100 ab5f38303db34b2dffc468610dd78b18 131 Gene3D G3DSA:1.20.1300.10 14 125 4.5E-27 T 28-03-2018 APY29_RS11100 ab5f38303db34b2dffc468610dd78b18 131 SUPERFAMILY SSF81343 4 125 1.37E-30 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APY29_RS04855 ca9b4b473e4fc6fecdca6e6859bcd509 181 Pfam PF12680 SnoaL-like domain 48 155 1.5E-11 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain APY29_RS04855 ca9b4b473e4fc6fecdca6e6859bcd509 181 SUPERFAMILY SSF54427 44 164 2.72E-23 T 28-03-2018 IPR032710 NTF2-like domain APY29_RS04855 ca9b4b473e4fc6fecdca6e6859bcd509 181 Gene3D G3DSA:3.10.450.50 43 168 2.3E-16 T 28-03-2018 APY29_RS20545 b312043cc25ef46d2b8edfea2f81a255 431 Gene3D G3DSA:3.90.600.10 330 424 5.9E-30 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 APY29_RS20545 b312043cc25ef46d2b8edfea2f81a255 431 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 1.1E-80 T 28-03-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 APY29_RS20545 b312043cc25ef46d2b8edfea2f81a255 431 Gene3D G3DSA:3.30.1490.20 87 189 8.7E-23 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APY29_RS20545 b312043cc25ef46d2b8edfea2f81a255 431 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 42.338 T 28-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 APY29_RS20545 b312043cc25ef46d2b8edfea2f81a255 431 Gene3D G3DSA:3.40.50.20 2 86 3.2E-37 T 28-03-2018 APY29_RS20545 b312043cc25ef46d2b8edfea2f81a255 431 SMART SM01209 103 296 9.7E-139 T 28-03-2018 APY29_RS20545 b312043cc25ef46d2b8edfea2f81a255 431 SUPERFAMILY SSF52440 2 103 1.73E-35 T 28-03-2018 IPR016185 Pre-ATP-grasp domain APY29_RS20545 b312043cc25ef46d2b8edfea2f81a255 431 Gene3D G3DSA:3.30.470.20 191 328 8.0E-61 T 28-03-2018 APY29_RS20545 b312043cc25ef46d2b8edfea2f81a255 431 SMART SM01210 330 423 1.9E-43 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 APY29_RS20545 b312043cc25ef46d2b8edfea2f81a255 431 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 7.3E-171 T 28-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 APY29_RS20545 b312043cc25ef46d2b8edfea2f81a255 431 SUPERFAMILY SSF56059 104 322 9.37E-67 T 28-03-2018 APY29_RS20545 b312043cc25ef46d2b8edfea2f81a255 431 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 3.5E-24 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 APY29_RS20545 b312043cc25ef46d2b8edfea2f81a255 431 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 2 102 1.6E-33 T 28-03-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 APY29_RS20545 b312043cc25ef46d2b8edfea2f81a255 431 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 28-03-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 APY29_RS20545 b312043cc25ef46d2b8edfea2f81a255 431 SUPERFAMILY SSF51246 329 424 2.75E-27 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 APY29_RS09945 cb8e3d69a580f0089a7fd1ad7ced677a 169 Gene3D G3DSA:2.40.50.180 37 95 1.3E-18 T 28-03-2018 APY29_RS09945 cb8e3d69a580f0089a7fd1ad7ced677a 169 SMART SM00260 14 155 1.5E-25 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS09945 cb8e3d69a580f0089a7fd1ad7ced677a 169 Gene3D G3DSA:2.30.30.40 96 149 2.5E-15 T 28-03-2018 APY29_RS09945 cb8e3d69a580f0089a7fd1ad7ced677a 169 Pfam PF01584 CheW-like domain 18 156 2.1E-33 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS09945 cb8e3d69a580f0089a7fd1ad7ced677a 169 SUPERFAMILY SSF50341 18 157 2.49E-32 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS20570 b79a21ce8603b026b98c2c27ee1e5186 640 Gene3D G3DSA:1.20.1250.20 1 202 8.4E-14 T 28-03-2018 APY29_RS20570 b79a21ce8603b026b98c2c27ee1e5186 640 Gene3D G3DSA:1.20.1250.20 216 434 9.6E-9 T 28-03-2018 APY29_RS20570 b79a21ce8603b026b98c2c27ee1e5186 640 Pfam PF01553 Acyltransferase 461 582 1.3E-24 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APY29_RS20570 b79a21ce8603b026b98c2c27ee1e5186 640 Gene3D G3DSA:3.40.1130.10 435 638 9.9E-42 T 28-03-2018 APY29_RS20570 b79a21ce8603b026b98c2c27ee1e5186 640 SMART SM00563 469 585 7.7E-29 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APY29_RS20570 b79a21ce8603b026b98c2c27ee1e5186 640 SUPERFAMILY SSF69593 426 586 6.54E-28 T 28-03-2018 APY29_RS20570 b79a21ce8603b026b98c2c27ee1e5186 640 SUPERFAMILY SSF103473 11 438 6.1E-26 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS20570 b79a21ce8603b026b98c2c27ee1e5186 640 Pfam PF07690 Major Facilitator Superfamily 34 385 5.6E-18 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS09750 a5a247f866bb22caf1eb709942aa798a 153 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 6 126 1.5E-37 T 28-03-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 APY29_RS09750 a5a247f866bb22caf1eb709942aa798a 153 ProSitePatterns PS00550 Hemerythrin family signature. 57 80 - T 28-03-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 APY29_RS09750 a5a247f866bb22caf1eb709942aa798a 153 Gene3D G3DSA:1.20.120.50 1 127 2.4E-37 T 28-03-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 APY29_RS09750 a5a247f866bb22caf1eb709942aa798a 153 SUPERFAMILY SSF47188 1 126 1.44E-34 T 28-03-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 APY29_RS09750 a5a247f866bb22caf1eb709942aa798a 153 Pfam PF01814 Hemerythrin HHE cation binding domain 13 126 4.3E-14 T 28-03-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 APY29_RS23230 48cc8ee616671bd248c9df752f8e2068 310 SUPERFAMILY SSF46785 2 112 1.41E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS23230 48cc8ee616671bd248c9df752f8e2068 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.6E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS23230 48cc8ee616671bd248c9df752f8e2068 310 Gene3D G3DSA:3.40.190.10 178 263 5.1E-23 T 28-03-2018 APY29_RS23230 48cc8ee616671bd248c9df752f8e2068 310 Pfam PF03466 LysR substrate binding domain 89 293 9.6E-39 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS23230 48cc8ee616671bd248c9df752f8e2068 310 Gene3D G3DSA:3.40.190.10 89 177 6.9E-14 T 28-03-2018 APY29_RS23230 48cc8ee616671bd248c9df752f8e2068 310 SUPERFAMILY SSF53850 90 296 1.52E-38 T 28-03-2018 APY29_RS23230 48cc8ee616671bd248c9df752f8e2068 310 Gene3D G3DSA:1.10.10.10 1 87 3.7E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS01390 947f5966aadf1869f99027572f8a6a40 167 Gene3D G3DSA:3.10.450.40 8 157 3.4E-24 T 28-03-2018 APY29_RS01390 947f5966aadf1869f99027572f8a6a40 167 SUPERFAMILY SSF160719 66 153 1.27E-11 T 28-03-2018 APY29_RS01390 947f5966aadf1869f99027572f8a6a40 167 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 11 162 1.8E-25 T 28-03-2018 IPR017737 Type VI secretion system, lysozyme-related protein APY29_RS01390 947f5966aadf1869f99027572f8a6a40 167 Pfam PF04965 Gene 25-like lysozyme 39 142 6.5E-22 T 28-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD APY29_RS03500 d7c0561a8a3563b630987e4ad9ba073e 434 Pfam PF06580 Histidine kinase 218 297 3.1E-20 T 28-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 APY29_RS03500 d7c0561a8a3563b630987e4ad9ba073e 434 SMART SM00387 312 408 3.2E-4 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS03500 d7c0561a8a3563b630987e4ad9ba073e 434 SUPERFAMILY SSF55874 275 406 9.82E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS03500 d7c0561a8a3563b630987e4ad9ba073e 434 Gene3D G3DSA:3.30.565.10 182 407 5.5E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS07410 d6a46e7420de40c6580b90b570307b08 272 Pfam PF05962 HutD 152 265 6.1E-21 T 28-03-2018 IPR010282 Uncharacterised protein family HutD/Ves APY29_RS07410 d6a46e7420de40c6580b90b570307b08 272 Pfam PF05962 HutD 14 81 3.9E-23 T 28-03-2018 IPR010282 Uncharacterised protein family HutD/Ves APY29_RS07410 d6a46e7420de40c6580b90b570307b08 272 SUPERFAMILY SSF51182 8 81 8.0E-22 T 28-03-2018 IPR011051 RmlC-like cupin domain APY29_RS07410 d6a46e7420de40c6580b90b570307b08 272 Gene3D G3DSA:2.60.120.10 13 189 4.0E-44 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS07410 d6a46e7420de40c6580b90b570307b08 272 SUPERFAMILY SSF51182 156 270 6.74E-22 T 28-03-2018 IPR011051 RmlC-like cupin domain APY29_RS07410 d6a46e7420de40c6580b90b570307b08 272 Gene3D G3DSA:2.60.120.10 190 270 3.6E-10 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS14475 5e31b1a9c441dd1c0d0ea90d596b9060 255 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 175 252 1.3E-23 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 APY29_RS14475 5e31b1a9c441dd1c0d0ea90d596b9060 255 Gene3D G3DSA:3.30.1150.10 78 255 1.1E-25 T 28-03-2018 APY29_RS14475 5e31b1a9c441dd1c0d0ea90d596b9060 255 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 177 253 1.9E-22 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 APY29_RS14475 5e31b1a9c441dd1c0d0ea90d596b9060 255 SUPERFAMILY SSF74653 174 251 4.32E-22 T 28-03-2018 APY29_RS02385 561f70d5b2eb068091f8c646db1fe0ab 374 Pfam PF01145 SPFH domain / Band 7 family 147 318 5.5E-24 T 28-03-2018 IPR001107 Band 7 domain APY29_RS02385 561f70d5b2eb068091f8c646db1fe0ab 374 SMART SM00244 142 301 3.2E-16 T 28-03-2018 IPR001107 Band 7 domain APY29_RS02385 561f70d5b2eb068091f8c646db1fe0ab 374 PRINTS PR00721 Stomatin signature 198 219 1.4E-14 T 28-03-2018 IPR001972 Stomatin family GO:0016020 APY29_RS02385 561f70d5b2eb068091f8c646db1fe0ab 374 PRINTS PR00721 Stomatin signature 277 295 1.4E-14 T 28-03-2018 IPR001972 Stomatin family GO:0016020 APY29_RS02385 561f70d5b2eb068091f8c646db1fe0ab 374 PRINTS PR00721 Stomatin signature 149 171 1.4E-14 T 28-03-2018 IPR001972 Stomatin family GO:0016020 APY29_RS02385 561f70d5b2eb068091f8c646db1fe0ab 374 PRINTS PR00721 Stomatin signature 296 317 1.4E-14 T 28-03-2018 IPR001972 Stomatin family GO:0016020 APY29_RS02385 561f70d5b2eb068091f8c646db1fe0ab 374 PRINTS PR00721 Stomatin signature 321 344 1.4E-14 T 28-03-2018 IPR001972 Stomatin family GO:0016020 APY29_RS02385 561f70d5b2eb068091f8c646db1fe0ab 374 SUPERFAMILY SSF117892 182 307 6.67E-25 T 28-03-2018 IPR001107 Band 7 domain APY29_RS13830 df3c626f4a361c5147b9dd5bba556ee3 906 Pfam PF07715 TonB-dependent Receptor Plug Domain 78 179 2.1E-12 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS13830 df3c626f4a361c5147b9dd5bba556ee3 906 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 59 905 9.7E-259 T 28-03-2018 IPR010104 Bacterial TonB-dependent receptor APY29_RS13830 df3c626f4a361c5147b9dd5bba556ee3 906 Gene3D G3DSA:2.40.170.20 181 905 7.5E-68 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS13830 df3c626f4a361c5147b9dd5bba556ee3 906 Pfam PF00593 TonB dependent receptor 426 904 1.6E-41 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS13830 df3c626f4a361c5147b9dd5bba556ee3 906 Gene3D G3DSA:2.170.130.10 51 180 1.1E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS13830 df3c626f4a361c5147b9dd5bba556ee3 906 SUPERFAMILY SSF56935 531 905 1.28E-88 T 28-03-2018 APY29_RS13830 df3c626f4a361c5147b9dd5bba556ee3 906 SUPERFAMILY SSF56935 49 248 1.28E-88 T 28-03-2018 APY29_RS13830 df3c626f4a361c5147b9dd5bba556ee3 906 SUPERFAMILY SSF56935 281 492 1.28E-88 T 28-03-2018 APY29_RS13830 df3c626f4a361c5147b9dd5bba556ee3 906 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 67 - T 28-03-2018 IPR010916 TonB box, conserved site APY29_RS22980 25894309ea91b8ee1d4dd9248fef196e 279 Pfam PF01925 Sulfite exporter TauE/SafE 35 273 5.8E-37 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 APY29_RS05710 464bd989c985ffe98755da527ba422ac 350 SMART SM00354 12 82 7.4E-22 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS05710 464bd989c985ffe98755da527ba422ac 350 Gene3D G3DSA:1.10.260.40 13 63 8.4E-19 T 28-03-2018 APY29_RS05710 464bd989c985ffe98755da527ba422ac 350 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 28-03-2018 APY29_RS05710 464bd989c985ffe98755da527ba422ac 350 Pfam PF13377 Periplasmic binding protein-like domain 179 344 1.6E-38 T 28-03-2018 APY29_RS05710 464bd989c985ffe98755da527ba422ac 350 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 1.9E-15 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS05710 464bd989c985ffe98755da527ba422ac 350 SUPERFAMILY SSF47413 13 68 1.59E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APY29_RS05710 464bd989c985ffe98755da527ba422ac 350 Gene3D G3DSA:3.40.50.2300 186 317 1.4E-47 T 28-03-2018 APY29_RS05710 464bd989c985ffe98755da527ba422ac 350 SUPERFAMILY SSF53822 73 347 2.36E-69 T 28-03-2018 IPR028082 Periplasmic binding protein-like I APY29_RS05710 464bd989c985ffe98755da527ba422ac 350 Gene3D G3DSA:3.40.50.2300 64 185 8.7E-29 T 28-03-2018 APY29_RS08265 8ec856cb77da202d69f486bc61d6961d 205 Pfam PF06197 Protein of unknown function (DUF998) 14 196 3.2E-14 T 28-03-2018 IPR009339 Protein of unknown function DUF998 APY29_RS21055 d25a6bab081bd4d182ed9a33814bdedb 169 Gene3D G3DSA:1.20.120.330 9 167 1.4E-4 T 28-03-2018 APY29_RS21055 d25a6bab081bd4d182ed9a33814bdedb 169 TIGRFAM TIGR02559 HrpB7: type III secretion protein HrpB7 5 159 1.6E-41 T 28-03-2018 IPR013392 Type III secretion protein HrpB7 APY29_RS21055 d25a6bab081bd4d182ed9a33814bdedb 169 Pfam PF09486 Bacterial type III secretion protein (HrpB7) 5 159 5.0E-33 T 28-03-2018 IPR013392 Type III secretion protein HrpB7 APY29_RS01185 6e847155da04201d18a36c761a57dee4 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.3E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS01185 6e847155da04201d18a36c761a57dee4 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.3E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS01185 6e847155da04201d18a36c761a57dee4 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.3E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS01185 6e847155da04201d18a36c761a57dee4 222 SUPERFAMILY SSF46894 141 206 3.13E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS01185 6e847155da04201d18a36c761a57dee4 222 Gene3D G3DSA:3.40.50.2300 1 124 8.1E-28 T 28-03-2018 APY29_RS01185 6e847155da04201d18a36c761a57dee4 222 SUPERFAMILY SSF52172 2 133 1.08E-26 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS01185 6e847155da04201d18a36c761a57dee4 222 SMART SM00448 2 116 3.5E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS01185 6e847155da04201d18a36c761a57dee4 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 6.9E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS01185 6e847155da04201d18a36c761a57dee4 222 SMART SM00421 147 204 1.4E-23 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS01185 6e847155da04201d18a36c761a57dee4 222 Gene3D G3DSA:1.10.10.10 125 211 3.8E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS01185 6e847155da04201d18a36c761a57dee4 222 Pfam PF00072 Response regulator receiver domain 5 114 8.4E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS01185 6e847155da04201d18a36c761a57dee4 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS00165 26d8e1fa84eb1c7644086db26e4825c4 230 Gene3D G3DSA:1.20.1540.10 12 219 2.0E-37 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APY29_RS00165 26d8e1fa84eb1c7644086db26e4825c4 230 Pfam PF01694 Rhomboid family 64 218 3.4E-35 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APY29_RS00165 26d8e1fa84eb1c7644086db26e4825c4 230 SUPERFAMILY SSF144091 12 220 7.85E-33 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APY29_RS05305 81c02f53939662c884dda278271eaa2c 717 SUPERFAMILY SSF50249 17 183 2.23E-30 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS05305 81c02f53939662c884dda278271eaa2c 717 SUPERFAMILY SSF52540 193 464 8.15E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS05305 81c02f53939662c884dda278271eaa2c 717 Gene3D G3DSA:2.40.50.140 61 152 4.9E-9 T 28-03-2018 APY29_RS05305 81c02f53939662c884dda278271eaa2c 717 Pfam PF00271 Helicase conserved C-terminal domain 534 612 9.3E-17 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS05305 81c02f53939662c884dda278271eaa2c 717 Gene3D G3DSA:1.10.150.20 13 60 1.2E-4 T 28-03-2018 APY29_RS05305 81c02f53939662c884dda278271eaa2c 717 Pfam PF00270 DEAD/DEAH box helicase 284 442 4.3E-15 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APY29_RS05305 81c02f53939662c884dda278271eaa2c 717 SMART SM00487 276 470 6.4E-29 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APY29_RS05305 81c02f53939662c884dda278271eaa2c 717 Gene3D G3DSA:3.40.50.300 468 654 1.5E-29 T 28-03-2018 APY29_RS05305 81c02f53939662c884dda278271eaa2c 717 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 37 686 7.6E-213 T 28-03-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 APY29_RS05305 81c02f53939662c884dda278271eaa2c 717 Gene3D G3DSA:3.40.50.300 264 467 4.2E-36 T 28-03-2018 APY29_RS05305 81c02f53939662c884dda278271eaa2c 717 SUPERFAMILY SSF52540 463 678 2.22E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS05305 81c02f53939662c884dda278271eaa2c 717 SMART SM00490 529 613 5.7E-22 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS05305 81c02f53939662c884dda278271eaa2c 717 Pfam PF17191 RecG wedge domain 24 180 5.9E-11 T 28-03-2018 IPR033454 RecG, wedge domain APY29_RS04940 f3cb45406cb18f755e2f5742b6d46006 460 Pfam PF02321 Outer membrane efflux protein 24 210 9.2E-25 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS04940 f3cb45406cb18f755e2f5742b6d46006 460 Pfam PF02321 Outer membrane efflux protein 235 431 8.6E-34 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS04940 f3cb45406cb18f755e2f5742b6d46006 460 Gene3D G3DSA:1.20.1600.10 14 434 5.3E-78 T 28-03-2018 APY29_RS04940 f3cb45406cb18f755e2f5742b6d46006 460 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 446 2.5E-131 T 28-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 APY29_RS04940 f3cb45406cb18f755e2f5742b6d46006 460 SUPERFAMILY SSF56954 23 446 1.44E-88 T 28-03-2018 APY29_RS18530 143167dd27d2f6b1f93a0a6914708187 119 Pfam PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit 28 114 1.8E-32 T 28-03-2018 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit APY29_RS18530 143167dd27d2f6b1f93a0a6914708187 119 SUPERFAMILY SSF48076 1 117 6.15E-48 T 28-03-2018 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit APY29_RS18530 143167dd27d2f6b1f93a0a6914708187 119 Gene3D G3DSA:1.10.700.10 5 118 1.5E-35 T 28-03-2018 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit APY29_RS21490 92e5b8f69c3d755ef63e1da8fea1e9d5 327 Pfam PF08908 Domain of unknown function (DUF1852) 1 323 1.2E-181 T 28-03-2018 IPR015004 Protein of unknown function DUF1852 APY29_RS21490 92e5b8f69c3d755ef63e1da8fea1e9d5 327 PIRSF PIRSF034367 1 327 2.6E-202 T 28-03-2018 IPR015004 Protein of unknown function DUF1852 APY29_RS21725 724c105f70fd75d0626fbdae46f221fa 833 PIRSF PIRSF005496 1 833 0.0 T 28-03-2018 APY29_RS21725 724c105f70fd75d0626fbdae46f221fa 833 Gene3D G3DSA:3.40.50.300 6 165 2.6E-21 T 28-03-2018 APY29_RS21725 724c105f70fd75d0626fbdae46f221fa 833 Gene3D G3DSA:3.40.50.300 182 349 1.0E-44 T 28-03-2018 APY29_RS21725 724c105f70fd75d0626fbdae46f221fa 833 SMART SM00490 204 330 5.1E-14 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS21725 724c105f70fd75d0626fbdae46f221fa 833 Pfam PF04408 Helicase associated domain (HA2) 386 450 5.7E-17 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 APY29_RS21725 724c105f70fd75d0626fbdae46f221fa 833 Pfam PF08482 ATP-dependent helicase C-terminal 682 819 1.1E-51 T 28-03-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal APY29_RS21725 724c105f70fd75d0626fbdae46f221fa 833 SMART SM00487 4 188 2.7E-15 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APY29_RS21725 724c105f70fd75d0626fbdae46f221fa 833 Pfam PF00271 Helicase conserved C-terminal domain 210 329 3.2E-15 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS21725 724c105f70fd75d0626fbdae46f221fa 833 SMART SM00847 385 481 2.1E-13 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 APY29_RS21725 724c105f70fd75d0626fbdae46f221fa 833 SUPERFAMILY SSF52540 19 341 7.71E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS21725 724c105f70fd75d0626fbdae46f221fa 833 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 6 832 0.0 T 28-03-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 APY29_RS07480 4c3f2656792f21810af881bc8f5fd6ed 254 Gene3D G3DSA:3.40.50.300 1 250 5.0E-44 T 28-03-2018 APY29_RS07480 4c3f2656792f21810af881bc8f5fd6ed 254 SMART SM00382 26 230 3.2E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS07480 4c3f2656792f21810af881bc8f5fd6ed 254 Pfam PF00005 ABC transporter 17 172 9.5E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS07480 4c3f2656792f21810af881bc8f5fd6ed 254 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 242 6.2E-110 T 28-03-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 APY29_RS07480 4c3f2656792f21810af881bc8f5fd6ed 254 SUPERFAMILY SSF52540 2 243 2.06E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS04315 54a22d24921793c0ae72d0f20f9d7b5b 153 SUPERFAMILY SSF81273 81 123 3.41E-13 T 28-03-2018 APY29_RS04315 54a22d24921793c0ae72d0f20f9d7b5b 153 Gene3D G3DSA:4.10.430.10 83 122 3.9E-18 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 APY29_RS04315 54a22d24921793c0ae72d0f20f9d7b5b 153 Pfam PF00816 H-NS histone family 12 116 1.3E-22 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 APY29_RS04315 54a22d24921793c0ae72d0f20f9d7b5b 153 SMART SM00528 77 122 4.4E-16 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 APY29_RS11020 6715ae49356d559863981624bcdc0b33 134 Pfam PF00034 Cytochrome c 49 120 5.5E-7 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS11020 6715ae49356d559863981624bcdc0b33 134 SUPERFAMILY SSF46626 55 123 1.06E-19 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS11020 6715ae49356d559863981624bcdc0b33 134 PRINTS PR00605 Class IC cytochrome C signature 55 66 8.7E-5 T 28-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 APY29_RS11020 6715ae49356d559863981624bcdc0b33 134 PRINTS PR00605 Class IC cytochrome C signature 98 120 8.7E-5 T 28-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 APY29_RS11020 6715ae49356d559863981624bcdc0b33 134 Gene3D G3DSA:1.10.760.10 18 123 2.2E-21 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS14180 1810771dfc4fea209b3f91c4deb54c3c 489 Pfam PF04055 Radical SAM superfamily 215 373 8.1E-15 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 APY29_RS14180 1810771dfc4fea209b3f91c4deb54c3c 489 Gene3D G3DSA:3.20.20.70 140 466 2.2E-33 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS14180 1810771dfc4fea209b3f91c4deb54c3c 489 Gene3D G3DSA:3.40.50.280 22 139 2.5E-8 T 28-03-2018 APY29_RS14180 1810771dfc4fea209b3f91c4deb54c3c 489 SMART SM00729 208 418 1.5E-18 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APY29_RS14180 1810771dfc4fea209b3f91c4deb54c3c 489 SUPERFAMILY SSF102114 193 401 1.96E-33 T 28-03-2018 APY29_RS07755 39a76b7172e95f7f7262f6da55d70627 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 138 209 4.8E-5 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 APY29_RS07755 39a76b7172e95f7f7262f6da55d70627 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 124 4.5E-29 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 APY29_RS07755 39a76b7172e95f7f7262f6da55d70627 249 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 4 247 4.7E-121 T 28-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 APY29_RS07755 39a76b7172e95f7f7262f6da55d70627 249 PIRSF PIRSF000709 173 241 0.004 T 28-03-2018 APY29_RS07755 39a76b7172e95f7f7262f6da55d70627 249 PIRSF PIRSF000709 1 115 5.7E-8 T 28-03-2018 APY29_RS07755 39a76b7172e95f7f7262f6da55d70627 249 SUPERFAMILY SSF53254 2 246 6.68E-78 T 28-03-2018 IPR029033 Histidine phosphatase superfamily APY29_RS07755 39a76b7172e95f7f7262f6da55d70627 249 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 2 229 44.579 T 28-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 APY29_RS07755 39a76b7172e95f7f7262f6da55d70627 249 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 28-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 APY29_RS07755 39a76b7172e95f7f7262f6da55d70627 249 Gene3D G3DSA:3.40.50.1240 1 249 1.9E-66 T 28-03-2018 IPR029033 Histidine phosphatase superfamily APY29_RS07755 39a76b7172e95f7f7262f6da55d70627 249 SMART SM00855 4 190 1.1E-25 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 APY29_RS20020 4dbae6f0ebdb49b27b45d020e7347802 259 Gene3D G3DSA:3.40.190.10 182 257 5.1E-5 T 28-03-2018 APY29_RS20020 4dbae6f0ebdb49b27b45d020e7347802 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 253 5.9E-38 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APY29_RS20020 4dbae6f0ebdb49b27b45d020e7347802 259 SMART SM00062 33 257 4.9E-38 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APY29_RS20020 4dbae6f0ebdb49b27b45d020e7347802 259 Gene3D G3DSA:3.40.190.10 22 181 4.8E-30 T 28-03-2018 APY29_RS20020 4dbae6f0ebdb49b27b45d020e7347802 259 SUPERFAMILY SSF53850 1 254 1.92E-47 T 28-03-2018 APY29_RS01375 9b4e9f8ac60e8ad82776505b716e64ea 497 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 20 492 1.6E-214 T 28-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath APY29_RS01375 9b4e9f8ac60e8ad82776505b716e64ea 497 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 492 2.6E-187 T 28-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 SUPERFAMILY SSF52172 890 1015 8.54E-26 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 352 469 1.4E-17 T 28-03-2018 IPR000014 PAS domain APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 496 630 7.6E-16 T 28-03-2018 IPR000014 PAS domain APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 SUPERFAMILY SSF55785 505 631 1.92E-18 T 28-03-2018 IPR000014 PAS domain APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 Pfam PF01627 Hpt domain 1202 1281 2.1E-7 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 Gene3D G3DSA:1.20.120.160 1172 1290 7.5E-9 T 28-03-2018 APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 SUPERFAMILY SSF55785 342 461 4.75E-20 T 28-03-2018 IPR000014 PAS domain APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 Gene3D G3DSA:3.40.50.2300 1031 1171 2.1E-37 T 28-03-2018 APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 Pfam PF00512 His Kinase A (phospho-acceptor) domain 643 708 1.3E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 SUPERFAMILY SSF55874 697 868 2.88E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 797 811 2.0E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 856 869 2.0E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 815 825 2.0E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 832 850 2.0E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 SMART SM00388 643 708 4.2E-23 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 755 871 3.8E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 Gene3D G3DSA:1.10.287.130 643 704 1.5E-20 T 28-03-2018 APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 Gene3D G3DSA:3.40.50.2300 885 1030 1.4E-26 T 28-03-2018 APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 SUPERFAMILY SSF47226 1179 1264 2.49E-11 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 SUPERFAMILY SSF47226 1130 1143 2.49E-11 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 SMART SM00091 493 560 2.5E-7 T 28-03-2018 IPR000014 PAS domain APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 SMART SM00091 350 416 7.5E-10 T 28-03-2018 IPR000014 PAS domain APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 Pfam PF00072 Response regulator receiver domain 1035 1148 1.2E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 Pfam PF00072 Response regulator receiver domain 893 1007 1.6E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 SUPERFAMILY SSF52172 1031 1153 2.13E-36 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 SMART SM01079 83 271 1.6E-56 T 28-03-2018 IPR006189 CHASE domain APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 Gene3D G3DSA:3.30.565.10 712 880 4.4E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 SMART SM00387 755 872 1.3E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 Gene3D G3DSA:3.30.450.20 345 487 9.1E-26 T 28-03-2018 APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 Pfam PF03924 CHASE domain 87 265 3.5E-41 T 28-03-2018 IPR006189 CHASE domain APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 SUPERFAMILY SSF47384 629 709 3.14E-21 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 Gene3D G3DSA:3.30.450.20 488 642 9.2E-26 T 28-03-2018 APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 SMART SM00448 891 1007 3.8E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 SMART SM00448 1032 1147 1.1E-34 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 Pfam PF13426 PAS domain 505 622 1.7E-12 T 28-03-2018 IPR000014 PAS domain APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 Pfam PF13426 PAS domain 361 462 3.2E-12 T 28-03-2018 IPR000014 PAS domain APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 SMART SM00086 421 463 11.0 T 28-03-2018 IPR001610 PAC motif APY29_RS09695 69c9f125d682592887194552cbb149fc 1364 SMART SM00086 581 623 1.9E-6 T 28-03-2018 IPR001610 PAC motif APY29_RS17200 31a0668d7cc6ec27413ccbb0de540069 102 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 99 7.2E-15 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family APY29_RS09650 147c9c436dba25254e6bc2b6419e936d 331 Gene3D G3DSA:3.40.50.2300 170 303 1.8E-36 T 28-03-2018 APY29_RS09650 147c9c436dba25254e6bc2b6419e936d 331 Pfam PF13377 Periplasmic binding protein-like domain 168 324 5.0E-33 T 28-03-2018 APY29_RS09650 147c9c436dba25254e6bc2b6419e936d 331 SUPERFAMILY SSF53822 58 312 3.81E-65 T 28-03-2018 IPR028082 Periplasmic binding protein-like I APY29_RS09650 147c9c436dba25254e6bc2b6419e936d 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 28-03-2018 APY29_RS09650 147c9c436dba25254e6bc2b6419e936d 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 7.0E-15 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS09650 147c9c436dba25254e6bc2b6419e936d 331 Gene3D G3DSA:3.40.50.2300 54 169 6.5E-32 T 28-03-2018 APY29_RS09650 147c9c436dba25254e6bc2b6419e936d 331 SMART SM00354 2 71 2.7E-26 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS09650 147c9c436dba25254e6bc2b6419e936d 331 SUPERFAMILY SSF47413 3 59 3.38E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APY29_RS09650 147c9c436dba25254e6bc2b6419e936d 331 Gene3D G3DSA:1.10.260.40 3 53 1.4E-19 T 28-03-2018 APY29_RS21315 20374a2f56ff4ccef65e408783d27859 275 ProSitePatterns PS00894 DeoR-type HTH domain signature. 23 57 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APY29_RS21315 20374a2f56ff4ccef65e408783d27859 275 Gene3D G3DSA:3.40.50.1360 93 262 3.5E-38 T 28-03-2018 APY29_RS21315 20374a2f56ff4ccef65e408783d27859 275 Pfam PF08220 DeoR-like helix-turn-helix domain 23 78 1.0E-16 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APY29_RS21315 20374a2f56ff4ccef65e408783d27859 275 SUPERFAMILY SSF100950 91 250 6.51E-26 T 28-03-2018 APY29_RS21315 20374a2f56ff4ccef65e408783d27859 275 Pfam PF00455 DeoR C terminal sensor domain 91 249 1.4E-51 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain APY29_RS21315 20374a2f56ff4ccef65e408783d27859 275 SMART SM01134 89 250 1.0E-71 T 28-03-2018 APY29_RS21315 20374a2f56ff4ccef65e408783d27859 275 Gene3D G3DSA:1.10.10.10 19 92 8.2E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS21315 20374a2f56ff4ccef65e408783d27859 275 SMART SM00420 23 75 8.8E-15 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APY29_RS21315 20374a2f56ff4ccef65e408783d27859 275 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 55 73 1.0E-7 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APY29_RS21315 20374a2f56ff4ccef65e408783d27859 275 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 55 1.0E-7 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APY29_RS21315 20374a2f56ff4ccef65e408783d27859 275 SUPERFAMILY SSF46785 20 94 1.11E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS17720 2b08228a5c704ab80b121a4ed8953498 207 Pfam PF04305 Protein of unknown function (DUF455) 1 199 1.8E-89 T 28-03-2018 IPR007402 Protein of unknown function DUF455 APY29_RS17720 2b08228a5c704ab80b121a4ed8953498 207 SUPERFAMILY SSF47240 4 203 4.06E-20 T 28-03-2018 IPR009078 Ferritin-like superfamily APY29_RS17720 2b08228a5c704ab80b121a4ed8953498 207 Gene3D G3DSA:1.20.1260.10 12 176 6.0E-46 T 28-03-2018 IPR012347 Ferritin-related APY29_RS04155 c74a6bdb3a97bac44d6b9c543222309b 715 SUPERFAMILY SSF56112 247 375 9.58E-14 T 28-03-2018 IPR011009 Protein kinase-like domain APY29_RS04155 c74a6bdb3a97bac44d6b9c543222309b 715 Pfam PF13847 Methyltransferase domain 61 141 1.2E-9 T 28-03-2018 IPR025714 Methyltransferase domain APY29_RS04155 c74a6bdb3a97bac44d6b9c543222309b 715 Gene3D G3DSA:3.40.50.150 11 229 2.8E-21 T 28-03-2018 APY29_RS04155 c74a6bdb3a97bac44d6b9c543222309b 715 Gene3D G3DSA:1.20.1170.10 402 601 2.8E-4 T 28-03-2018 APY29_RS04155 c74a6bdb3a97bac44d6b9c543222309b 715 SUPERFAMILY SSF53335 48 145 3.41E-18 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS04155 c74a6bdb3a97bac44d6b9c543222309b 715 Gene3D G3DSA:1.10.510.10 273 401 7.0E-7 T 28-03-2018 APY29_RS04155 c74a6bdb3a97bac44d6b9c543222309b 715 Pfam PF01636 Phosphotransferase enzyme family 184 377 2.7E-5 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase APY29_RS02250 44e79df6b846417a6b61c9473bc1b223 262 SUPERFAMILY SSF52317 32 257 1.74E-41 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS02250 44e79df6b846417a6b61c9473bc1b223 262 Pfam PF06283 Trehalose utilisation 23 243 2.5E-56 T 28-03-2018 IPR029010 ThuA-like domain APY29_RS02250 44e79df6b846417a6b61c9473bc1b223 262 Gene3D G3DSA:3.40.50.880 16 262 7.3E-47 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS13690 b9cd40d6c3b9afb954d699dac1d3432c 622 SMART SM00065 34 177 1.4E-6 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS13690 b9cd40d6c3b9afb954d699dac1d3432c 622 SUPERFAMILY SSF55781 35 172 2.47E-25 T 28-03-2018 IPR029016 GAF domain-like APY29_RS13690 b9cd40d6c3b9afb954d699dac1d3432c 622 Pfam PF01590 GAF domain 37 156 2.7E-10 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS13690 b9cd40d6c3b9afb954d699dac1d3432c 622 Pfam PF00990 Diguanylate cyclase, GGDEF domain 175 314 3.7E-11 T 28-03-2018 IPR000160 GGDEF domain APY29_RS13690 b9cd40d6c3b9afb954d699dac1d3432c 622 SUPERFAMILY SSF55073 180 323 6.43E-10 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS13690 b9cd40d6c3b9afb954d699dac1d3432c 622 SMART SM00267 163 333 7.4E-5 T 28-03-2018 IPR000160 GGDEF domain APY29_RS13690 b9cd40d6c3b9afb954d699dac1d3432c 622 Gene3D G3DSA:3.20.20.450 341 607 4.9E-92 T 28-03-2018 IPR001633 EAL domain APY29_RS13690 b9cd40d6c3b9afb954d699dac1d3432c 622 SMART SM00052 347 593 3.5E-106 T 28-03-2018 IPR001633 EAL domain APY29_RS13690 b9cd40d6c3b9afb954d699dac1d3432c 622 Pfam PF00563 EAL domain 354 588 6.4E-72 T 28-03-2018 IPR001633 EAL domain APY29_RS13690 b9cd40d6c3b9afb954d699dac1d3432c 622 Gene3D G3DSA:3.30.450.40 19 171 1.2E-22 T 28-03-2018 IPR029016 GAF domain-like APY29_RS13690 b9cd40d6c3b9afb954d699dac1d3432c 622 Gene3D G3DSA:3.30.70.270 172 340 8.5E-17 T 28-03-2018 APY29_RS13690 b9cd40d6c3b9afb954d699dac1d3432c 622 SUPERFAMILY SSF141868 362 602 5.75E-83 T 28-03-2018 IPR001633 EAL domain APY29_RS09195 47dc684080f6db2b82187256943f6302 264 Pfam PF04230 Polysaccharide pyruvyl transferase 74 209 1.6E-15 T 28-03-2018 IPR007345 Polysaccharide pyruvyl transferase APY29_RS15220 1f185cae5b8c69f2cc652b37805eb436 131 Gene3D G3DSA:3.30.1450.10 28 100 5.9E-10 T 28-03-2018 APY29_RS15220 1f185cae5b8c69f2cc652b37805eb436 131 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 118 31.174 T 28-03-2018 IPR026592 Outer membrane protein assembly factor BamE APY29_RS15220 1f185cae5b8c69f2cc652b37805eb436 131 Pfam PF04355 SmpA / OmlA family 28 98 6.5E-22 T 28-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 APY29_RS09000 aec2f5ab4777a8fb267786f1be048415 138 Pfam PF04956 TrbC/VIRB2 family 17 112 7.9E-14 T 28-03-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 APY29_RS15580 d2a312ec8c49a89bda4d30f60978ef2a 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 156 2.1E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS15580 d2a312ec8c49a89bda4d30f60978ef2a 712 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 695 712 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site APY29_RS15580 d2a312ec8c49a89bda4d30f60978ef2a 712 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 712 1.1E-84 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APY29_RS15580 d2a312ec8c49a89bda4d30f60978ef2a 712 Pfam PF00593 TonB dependent receptor 243 711 1.8E-50 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS15580 d2a312ec8c49a89bda4d30f60978ef2a 712 SUPERFAMILY SSF56935 27 712 5.65E-115 T 28-03-2018 APY29_RS15580 d2a312ec8c49a89bda4d30f60978ef2a 712 Gene3D G3DSA:2.170.130.10 25 163 4.0E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS15580 d2a312ec8c49a89bda4d30f60978ef2a 712 Gene3D G3DSA:2.40.170.20 169 712 2.9E-67 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS19165 d828b02151382b4abf20d0614b6dbcd9 209 PIRSF PIRSF001296 10 198 2.1E-68 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 APY29_RS19165 d828b02151382b4abf20d0614b6dbcd9 209 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 10 194 31.536 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 APY29_RS19165 d828b02151382b4abf20d0614b6dbcd9 209 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 16 193 6.0E-50 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 APY29_RS19165 d828b02151382b4abf20d0614b6dbcd9 209 Pfam PF02669 K+-transporting ATPase, c chain 16 193 1.4E-62 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 APY29_RS01125 eecce7c9c2a274d9007c210612cb62bf 440 Gene3D G3DSA:3.20.20.120 180 440 3.8E-69 T 28-03-2018 IPR029065 Enolase C-terminal domain-like APY29_RS01125 eecce7c9c2a274d9007c210612cb62bf 440 SUPERFAMILY SSF51604 184 431 1.11E-69 T 28-03-2018 IPR029065 Enolase C-terminal domain-like APY29_RS01125 eecce7c9c2a274d9007c210612cb62bf 440 SUPERFAMILY SSF54826 3 138 2.53E-37 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS01125 eecce7c9c2a274d9007c210612cb62bf 440 Pfam PF13378 Enolase C-terminal domain-like 202 415 1.4E-60 T 28-03-2018 IPR029065 Enolase C-terminal domain-like APY29_RS01125 eecce7c9c2a274d9007c210612cb62bf 440 SMART SM00922 199 295 6.7E-27 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APY29_RS01125 eecce7c9c2a274d9007c210612cb62bf 440 Gene3D G3DSA:3.30.390.10 1 179 3.8E-37 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS01125 eecce7c9c2a274d9007c210612cb62bf 440 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 34 136 1.2E-6 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APY29_RS03930 0764549a8b9f3e87b8d38c77e3d148bb 433 Pfam PF02687 FtsX-like permease family 337 421 4.5E-11 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 APY29_RS03930 0764549a8b9f3e87b8d38c77e3d148bb 433 Pfam PF12704 MacB-like periplasmic core domain 20 216 5.4E-23 T 28-03-2018 IPR025857 MacB-like periplasmic core domain APY29_RS10665 d702cad33c2402064bffc2a25f9c6903 303 SUPERFAMILY SSF53223 12 131 2.88E-36 T 28-03-2018 APY29_RS10665 d702cad33c2402064bffc2a25f9c6903 303 SUPERFAMILY SSF51735 132 290 2.39E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS10665 d702cad33c2402064bffc2a25f9c6903 303 Gene3D G3DSA:3.40.50.720 150 275 2.2E-35 T 28-03-2018 APY29_RS10665 d702cad33c2402064bffc2a25f9c6903 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 119 140 5.7E-81 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 APY29_RS10665 d702cad33c2402064bffc2a25f9c6903 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 43 65 5.7E-81 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 APY29_RS10665 d702cad33c2402064bffc2a25f9c6903 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 267 285 5.7E-81 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 APY29_RS10665 d702cad33c2402064bffc2a25f9c6903 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 215 244 5.7E-81 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 APY29_RS10665 d702cad33c2402064bffc2a25f9c6903 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 84 111 5.7E-81 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 APY29_RS10665 d702cad33c2402064bffc2a25f9c6903 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 250 266 5.7E-81 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 APY29_RS10665 d702cad33c2402064bffc2a25f9c6903 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 164 184 5.7E-81 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 APY29_RS10665 d702cad33c2402064bffc2a25f9c6903 303 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 271 279 - T 28-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 APY29_RS10665 d702cad33c2402064bffc2a25f9c6903 303 Hamap MF_01576 Bifunctional protein FolD [folD]. 12 294 36.685 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 APY29_RS10665 d702cad33c2402064bffc2a25f9c6903 303 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 133 291 6.7E-63 T 28-03-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 APY29_RS10665 d702cad33c2402064bffc2a25f9c6903 303 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 14 130 6.7E-35 T 28-03-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 APY29_RS10665 d702cad33c2402064bffc2a25f9c6903 303 Gene3D G3DSA:3.40.50.10860 20 149 1.1E-43 T 28-03-2018 APY29_RS18255 babeb2655afa5fd087c185f002416cb5 157 SUPERFAMILY SSF55826 5 153 1.15E-37 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APY29_RS18255 babeb2655afa5fd087c185f002416cb5 157 PIRSF PIRSF006181 1 157 4.6E-40 T 28-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC APY29_RS18255 babeb2655afa5fd087c185f002416cb5 157 Gene3D G3DSA:3.90.960.10 1 157 1.4E-35 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APY29_RS18255 babeb2655afa5fd087c185f002416cb5 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 5 156 1.2E-51 T 28-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC APY29_RS18255 babeb2655afa5fd087c185f002416cb5 157 Pfam PF04073 Aminoacyl-tRNA editing domain 35 145 4.6E-22 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APY29_RS03935 c4afc486c61c8e6c11c9deafb8f5983f 239 SMART SM00382 30 217 7.3E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS03935 c4afc486c61c8e6c11c9deafb8f5983f 239 Gene3D G3DSA:3.40.50.300 1 239 2.7E-66 T 28-03-2018 APY29_RS03935 c4afc486c61c8e6c11c9deafb8f5983f 239 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS03935 c4afc486c61c8e6c11c9deafb8f5983f 239 SUPERFAMILY SSF52540 1 233 8.87E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS03935 c4afc486c61c8e6c11c9deafb8f5983f 239 Pfam PF00005 ABC transporter 21 169 2.7E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS16195 108a5707826e6b7a31acdade35f2b430 321 SUPERFAMILY SSF160240 215 287 7.46E-11 T 28-03-2018 APY29_RS16195 108a5707826e6b7a31acdade35f2b430 321 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 16 288 1.3E-86 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APY29_RS16195 108a5707826e6b7a31acdade35f2b430 321 Gene3D G3DSA:1.20.1510.10 14 209 2.7E-57 T 28-03-2018 APY29_RS16195 108a5707826e6b7a31acdade35f2b430 321 Gene3D G3DSA:3.30.70.1350 212 290 4.2E-15 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain APY29_RS16195 108a5707826e6b7a31acdade35f2b430 321 Pfam PF01545 Cation efflux family 19 209 2.3E-46 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APY29_RS16195 108a5707826e6b7a31acdade35f2b430 321 SUPERFAMILY SSF161111 17 210 6.15E-56 T 28-03-2018 APY29_RS06480 54686e17376fc168a785ce5b7e9a8887 878 Pfam PF00593 TonB dependent receptor 411 874 2.5E-31 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS06480 54686e17376fc168a785ce5b7e9a8887 878 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 162 1.5E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS06480 54686e17376fc168a785ce5b7e9a8887 878 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 33 878 6.5E-172 T 28-03-2018 IPR010104 Bacterial TonB-dependent receptor APY29_RS06480 54686e17376fc168a785ce5b7e9a8887 878 SUPERFAMILY SSF56935 509 690 1.89E-90 T 28-03-2018 APY29_RS06480 54686e17376fc168a785ce5b7e9a8887 878 SUPERFAMILY SSF56935 20 228 1.89E-90 T 28-03-2018 APY29_RS06480 54686e17376fc168a785ce5b7e9a8887 878 SUPERFAMILY SSF56935 264 475 1.89E-90 T 28-03-2018 APY29_RS06480 54686e17376fc168a785ce5b7e9a8887 878 SUPERFAMILY SSF56935 724 878 1.89E-90 T 28-03-2018 APY29_RS06480 54686e17376fc168a785ce5b7e9a8887 878 Gene3D G3DSA:2.170.130.10 25 169 7.7E-18 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS06480 54686e17376fc168a785ce5b7e9a8887 878 Gene3D G3DSA:2.40.170.20 177 878 1.6E-73 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS01990 f5b19957d072cdf45d31d55d110e5c3f 250 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 111 119 - T 28-03-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 APY29_RS01990 f5b19957d072cdf45d31d55d110e5c3f 250 Pfam PF01223 DNA/RNA non-specific endonuclease 43 233 6.0E-43 T 28-03-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 APY29_RS01990 f5b19957d072cdf45d31d55d110e5c3f 250 Gene3D G3DSA:3.40.570.10 31 246 9.1E-50 T 28-03-2018 APY29_RS01990 f5b19957d072cdf45d31d55d110e5c3f 250 SUPERFAMILY SSF54060 26 247 2.06E-56 T 28-03-2018 APY29_RS01990 f5b19957d072cdf45d31d55d110e5c3f 250 SMART SM00892 49 239 1.1E-33 T 28-03-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 APY29_RS01990 f5b19957d072cdf45d31d55d110e5c3f 250 SMART SM00477 50 239 1.1E-23 T 28-03-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 APY29_RS22425 6d1562273446fdd3a8e3a238fbd4da1b 329 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 315 1.8E-70 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 APY29_RS22425 6d1562273446fdd3a8e3a238fbd4da1b 329 PIRSF PIRSF006470 2 325 1.1E-73 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 APY29_RS22425 6d1562273446fdd3a8e3a238fbd4da1b 329 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 43 273 8.4E-57 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 APY29_RS08120 58b58f8636a43feff2c936e5cb04e19f 521 Pfam PF00144 Beta-lactamase 28 361 1.8E-70 T 28-03-2018 IPR001466 Beta-lactamase-related APY29_RS08120 58b58f8636a43feff2c936e5cb04e19f 521 Gene3D G3DSA:3.40.710.10 17 368 6.1E-83 T 28-03-2018 APY29_RS08120 58b58f8636a43feff2c936e5cb04e19f 521 Pfam PF11954 Domain of unknown function (DUF3471) 406 511 2.0E-31 T 28-03-2018 IPR021860 Peptidase S12, Pab87-related, C-terminal APY29_RS08120 58b58f8636a43feff2c936e5cb04e19f 521 SUPERFAMILY SSF56601 21 355 8.21E-87 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like APY29_RS09535 60cc831db5432de2284305d8c8d3e86c 459 Pfam PF16656 Purple acid Phosphatase, N-terminal domain 48 143 7.1E-14 T 28-03-2018 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 APY29_RS09535 60cc831db5432de2284305d8c8d3e86c 459 Pfam PF00149 Calcineurin-like phosphoesterase 152 350 6.0E-15 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 APY29_RS09535 60cc831db5432de2284305d8c8d3e86c 459 SUPERFAMILY SSF49363 45 144 5.1E-10 T 28-03-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 APY29_RS09535 60cc831db5432de2284305d8c8d3e86c 459 Gene3D G3DSA:3.60.21.10 148 444 3.1E-41 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like APY29_RS09535 60cc831db5432de2284305d8c8d3e86c 459 SUPERFAMILY SSF56300 150 423 1.58E-46 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like APY29_RS09535 60cc831db5432de2284305d8c8d3e86c 459 Gene3D G3DSA:2.60.40.380 47 147 1.4E-16 T 28-03-2018 APY29_RS09450 79d24cfd4fad3738496a49f0c3db4170 791 Gene3D G3DSA:1.50.10.20 91 279 2.9E-17 T 28-03-2018 APY29_RS09450 79d24cfd4fad3738496a49f0c3db4170 791 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 56 570 1.9E-166 T 28-03-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 APY29_RS09450 79d24cfd4fad3738496a49f0c3db4170 791 Gene3D G3DSA:1.50.10.10 280 455 1.2E-15 T 28-03-2018 APY29_RS09450 79d24cfd4fad3738496a49f0c3db4170 791 SUPERFAMILY SSF48208 103 145 9.18E-10 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 APY29_RS09450 79d24cfd4fad3738496a49f0c3db4170 791 SUPERFAMILY SSF48208 189 409 9.18E-10 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 APY29_RS07580 d36c92048ee4d0006ba4e0578c00b7b4 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 49 71 2.1E-31 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APY29_RS07580 d36c92048ee4d0006ba4e0578c00b7b4 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 87 96 2.1E-31 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APY29_RS07580 d36c92048ee4d0006ba4e0578c00b7b4 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 295 309 2.1E-31 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APY29_RS07580 d36c92048ee4d0006ba4e0578c00b7b4 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 144 161 2.1E-31 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APY29_RS07580 d36c92048ee4d0006ba4e0578c00b7b4 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 271 276 2.1E-31 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APY29_RS07580 d36c92048ee4d0006ba4e0578c00b7b4 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 230 239 2.1E-31 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APY29_RS07580 d36c92048ee4d0006ba4e0578c00b7b4 315 Gene3D G3DSA:3.40.50.1370 158 314 2.9E-51 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APY29_RS07580 d36c92048ee4d0006ba4e0578c00b7b4 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 59 78 4.4E-21 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APY29_RS07580 d36c92048ee4d0006ba4e0578c00b7b4 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 279 302 4.4E-21 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APY29_RS07580 d36c92048ee4d0006ba4e0578c00b7b4 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 145 156 4.4E-21 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APY29_RS07580 d36c92048ee4d0006ba4e0578c00b7b4 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 4.4E-21 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APY29_RS07580 d36c92048ee4d0006ba4e0578c00b7b4 315 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 59 66 - T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APY29_RS07580 d36c92048ee4d0006ba4e0578c00b7b4 315 SUPERFAMILY SSF53671 11 315 3.27E-87 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APY29_RS07580 d36c92048ee4d0006ba4e0578c00b7b4 315 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 12 315 38.859 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APY29_RS07580 d36c92048ee4d0006ba4e0578c00b7b4 315 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 13 314 9.4E-83 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APY29_RS07580 d36c92048ee4d0006ba4e0578c00b7b4 315 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 13 157 2.6E-37 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APY29_RS07580 d36c92048ee4d0006ba4e0578c00b7b4 315 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 166 312 2.8E-21 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APY29_RS07580 d36c92048ee4d0006ba4e0578c00b7b4 315 Gene3D G3DSA:3.40.50.1370 1 157 8.3E-46 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APY29_RS12465 7cc7a5002f0c1de043713594b7e283f0 718 Gene3D G3DSA:2.40.170.20 164 718 3.2E-44 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS12465 7cc7a5002f0c1de043713594b7e283f0 718 Gene3D G3DSA:2.170.130.10 47 163 6.1E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS12465 7cc7a5002f0c1de043713594b7e283f0 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 150 2.1E-12 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS12465 7cc7a5002f0c1de043713594b7e283f0 718 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 30 718 3.2E-162 T 28-03-2018 IPR010104 Bacterial TonB-dependent receptor APY29_RS12465 7cc7a5002f0c1de043713594b7e283f0 718 SUPERFAMILY SSF56935 23 219 3.36E-60 T 28-03-2018 APY29_RS12465 7cc7a5002f0c1de043713594b7e283f0 718 SUPERFAMILY SSF56935 504 718 3.36E-60 T 28-03-2018 APY29_RS12465 7cc7a5002f0c1de043713594b7e283f0 718 SUPERFAMILY SSF56935 251 460 3.36E-60 T 28-03-2018 APY29_RS12465 7cc7a5002f0c1de043713594b7e283f0 718 Pfam PF14905 Outer membrane protein beta-barrel family 532 712 1.5E-10 T 28-03-2018 APY29_RS04865 af10ee98495ef61f873fe8aa04c8e603 300 Gene3D G3DSA:1.10.10.10 1 87 2.1E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS04865 af10ee98495ef61f873fe8aa04c8e603 300 Pfam PF03466 LysR substrate binding domain 93 294 3.3E-42 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS04865 af10ee98495ef61f873fe8aa04c8e603 300 Gene3D G3DSA:3.40.190.10 179 270 2.1E-20 T 28-03-2018 APY29_RS04865 af10ee98495ef61f873fe8aa04c8e603 300 Gene3D G3DSA:3.40.190.10 92 178 1.7E-22 T 28-03-2018 APY29_RS04865 af10ee98495ef61f873fe8aa04c8e603 300 SUPERFAMILY SSF53850 95 297 1.84E-42 T 28-03-2018 APY29_RS04865 af10ee98495ef61f873fe8aa04c8e603 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 7.1E-23 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS04865 af10ee98495ef61f873fe8aa04c8e603 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.2E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS04865 af10ee98495ef61f873fe8aa04c8e603 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.2E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS04865 af10ee98495ef61f873fe8aa04c8e603 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.2E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS04865 af10ee98495ef61f873fe8aa04c8e603 300 SUPERFAMILY SSF46785 4 115 1.15E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS14895 12b0a428663e605db88acc499cef84da 363 Gene3D G3DSA:3.40.190.10 217 363 2.8E-27 T 28-03-2018 APY29_RS14895 12b0a428663e605db88acc499cef84da 363 Gene3D G3DSA:3.40.190.10 51 213 5.5E-33 T 28-03-2018 APY29_RS14895 12b0a428663e605db88acc499cef84da 363 PIRSF PIRSF002756 4 361 2.0E-105 T 28-03-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 APY29_RS14895 12b0a428663e605db88acc499cef84da 363 SUPERFAMILY SSF53850 52 359 1.84E-97 T 28-03-2018 APY29_RS14895 12b0a428663e605db88acc499cef84da 363 Pfam PF12849 PBP superfamily domain 43 332 4.9E-60 T 28-03-2018 IPR024370 PBP domain APY29_RS14895 12b0a428663e605db88acc499cef84da 363 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 52 359 2.5E-124 T 28-03-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 APY29_RS14000 b22ef68b96ce6523cce91d1e61a1b491 164 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 16 160 1.7E-48 T 28-03-2018 IPR008136 CinA, C-terminal APY29_RS14000 b22ef68b96ce6523cce91d1e61a1b491 164 Pfam PF02464 Competence-damaged protein 10 162 1.8E-57 T 28-03-2018 IPR008136 CinA, C-terminal APY29_RS14000 b22ef68b96ce6523cce91d1e61a1b491 164 Gene3D G3DSA:3.90.950.20 2 164 3.5E-55 T 28-03-2018 APY29_RS14000 b22ef68b96ce6523cce91d1e61a1b491 164 SUPERFAMILY SSF142433 7 162 3.4E-54 T 28-03-2018 IPR008136 CinA, C-terminal APY29_RS21180 943875b666cbedaff97cfa0a0e98fb6d 344 SMART SM00876 222 314 6.8E-49 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 APY29_RS21180 943875b666cbedaff97cfa0a0e98fb6d 344 SUPERFAMILY SSF102114 7 316 1.44E-96 T 28-03-2018 APY29_RS21180 943875b666cbedaff97cfa0a0e98fb6d 344 PIRSF PIRSF001619 1 320 8.1E-133 T 28-03-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 APY29_RS21180 943875b666cbedaff97cfa0a0e98fb6d 344 SMART SM00729 45 257 9.7E-40 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APY29_RS21180 943875b666cbedaff97cfa0a0e98fb6d 344 TIGRFAM TIGR00433 bioB: biotin synthase 16 312 2.7E-123 T 28-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 APY29_RS21180 943875b666cbedaff97cfa0a0e98fb6d 344 Gene3D G3DSA:3.20.20.70 6 317 1.0E-61 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS21180 943875b666cbedaff97cfa0a0e98fb6d 344 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 222 312 3.7E-20 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 APY29_RS21180 943875b666cbedaff97cfa0a0e98fb6d 344 Hamap MF_01694 Biotin synthase [bioB]. 7 315 41.907 T 28-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 APY29_RS21180 943875b666cbedaff97cfa0a0e98fb6d 344 Pfam PF04055 Radical SAM superfamily 51 205 1.5E-15 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 APY29_RS07330 1d328a70ed978b9606424846880e7f0a 424 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 413 9.1E-113 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 APY29_RS07330 1d328a70ed978b9606424846880e7f0a 424 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 422 1.2E-177 T 28-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS07330 1d328a70ed978b9606424846880e7f0a 424 SUPERFAMILY SSF55205 1 422 3.27E-143 T 28-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 APY29_RS07330 1d328a70ed978b9606424846880e7f0a 424 Gene3D G3DSA:3.65.10.10 227 424 2.3E-48 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 APY29_RS07330 1d328a70ed978b9606424846880e7f0a 424 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 423 45.496 T 28-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 APY29_RS07330 1d328a70ed978b9606424846880e7f0a 424 Gene3D G3DSA:3.65.10.10 21 226 2.8E-50 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 APY29_RS11070 86232e0ead4caf915c87f9c6438c782a 239 SUPERFAMILY SSF100950 10 230 7.33E-45 T 28-03-2018 APY29_RS11070 86232e0ead4caf915c87f9c6438c782a 239 Gene3D G3DSA:3.40.50.1360 7 239 1.6E-44 T 28-03-2018 APY29_RS11070 86232e0ead4caf915c87f9c6438c782a 239 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 16 226 3.8E-44 T 28-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 APY29_RS11070 86232e0ead4caf915c87f9c6438c782a 239 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 15 228 6.7E-39 T 28-03-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 APY29_RS21110 00ce8f83bb268653597f39c2a9c03dea 214 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 190 202 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APY29_RS21110 00ce8f83bb268653597f39c2a9c03dea 214 Pfam PF00813 FliP family 13 209 2.7E-64 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APY29_RS21110 00ce8f83bb268653597f39c2a9c03dea 214 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 142 157 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APY29_RS21110 00ce8f83bb268653597f39c2a9c03dea 214 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 9 209 6.5E-90 T 28-03-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 APY29_RS21110 00ce8f83bb268653597f39c2a9c03dea 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 10 29 8.7E-64 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APY29_RS21110 00ce8f83bb268653597f39c2a9c03dea 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 29 49 8.7E-64 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APY29_RS21110 00ce8f83bb268653597f39c2a9c03dea 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 187 212 8.7E-64 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APY29_RS21110 00ce8f83bb268653597f39c2a9c03dea 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 163 184 8.7E-64 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APY29_RS21110 00ce8f83bb268653597f39c2a9c03dea 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 49 68 8.7E-64 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APY29_RS21110 00ce8f83bb268653597f39c2a9c03dea 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 142 162 8.7E-64 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APY29_RS15055 800dbce915357e64741449a9462b8c4f 120 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 6.4E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS15055 800dbce915357e64741449a9462b8c4f 120 Gene3D G3DSA:1.10.287.100 81 116 6.3E-10 T 28-03-2018 APY29_RS15055 800dbce915357e64741449a9462b8c4f 120 Gene3D G3DSA:1.10.10.10 6 80 6.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS15055 800dbce915357e64741449a9462b8c4f 120 SUPERFAMILY SSF46785 5 79 3.44E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS15055 800dbce915357e64741449a9462b8c4f 120 SMART SM00345 16 75 6.2E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS22840 763b68b1afa3dee5e7db006b08bf75ee 350 SUPERFAMILY SSF53822 70 343 3.93E-69 T 28-03-2018 IPR028082 Periplasmic binding protein-like I APY29_RS22840 763b68b1afa3dee5e7db006b08bf75ee 350 SMART SM00354 10 80 4.1E-29 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS22840 763b68b1afa3dee5e7db006b08bf75ee 350 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 56 9.4E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS22840 763b68b1afa3dee5e7db006b08bf75ee 350 SUPERFAMILY SSF47413 11 68 3.19E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APY29_RS22840 763b68b1afa3dee5e7db006b08bf75ee 350 Gene3D G3DSA:3.40.50.2300 184 314 1.2E-43 T 28-03-2018 APY29_RS22840 763b68b1afa3dee5e7db006b08bf75ee 350 Gene3D G3DSA:1.10.260.40 11 64 1.7E-22 T 28-03-2018 APY29_RS22840 763b68b1afa3dee5e7db006b08bf75ee 350 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 22 32 4.9E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS22840 763b68b1afa3dee5e7db006b08bf75ee 350 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 12 22 4.9E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS22840 763b68b1afa3dee5e7db006b08bf75ee 350 Pfam PF13377 Periplasmic binding protein-like domain 177 342 2.3E-33 T 28-03-2018 APY29_RS22840 763b68b1afa3dee5e7db006b08bf75ee 350 Gene3D G3DSA:3.40.50.2300 65 183 1.4E-35 T 28-03-2018 APY29_RS18545 973bb95564076d90eb556fce0f9422f0 352 Pfam PF13557 Putative MetA-pathway of phenol degradation 92 346 1.1E-44 T 28-03-2018 IPR025737 MetA-pathway of phenol degradation, putative APY29_RS18545 973bb95564076d90eb556fce0f9422f0 352 Gene3D G3DSA:2.40.160.40 78 338 5.3E-6 T 28-03-2018 APY29_RS07535 0cc1082791499358455ee737a9507a5e 230 SUPERFAMILY SSF51419 4 220 1.96E-73 T 28-03-2018 IPR029066 PLP-binding barrel APY29_RS07535 0cc1082791499358455ee737a9507a5e 230 Gene3D G3DSA:3.20.20.10 3 230 1.5E-66 T 28-03-2018 IPR029066 PLP-binding barrel APY29_RS07535 0cc1082791499358455ee737a9507a5e 230 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 6 222 1.4E-70 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein APY29_RS07535 0cc1082791499358455ee737a9507a5e 230 PIRSF PIRSF004848 3 227 3.2E-73 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein APY29_RS07535 0cc1082791499358455ee737a9507a5e 230 Pfam PF01168 Alanine racemase, N-terminal domain 17 222 1.9E-30 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 APY29_RS05765 0f57912c3fb80b3fe9e409daa216b2c7 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 6.5E-23 T 28-03-2018 IPR010035 ThiS, thiamine-biosynthesis APY29_RS05765 0f57912c3fb80b3fe9e409daa216b2c7 66 Gene3D G3DSA:3.10.20.30 1 66 3.4E-23 T 28-03-2018 IPR012675 Beta-grasp domain APY29_RS05765 0f57912c3fb80b3fe9e409daa216b2c7 66 Pfam PF02597 ThiS family 3 66 6.7E-15 T 28-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 APY29_RS05765 0f57912c3fb80b3fe9e409daa216b2c7 66 SUPERFAMILY SSF54285 2 65 4.22E-18 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APY29_RS08815 fc96ad5880289436da38fb15e6b38226 196 Gene3D G3DSA:2.30.30.180 94 156 1.9E-13 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal APY29_RS08815 fc96ad5880289436da38fb15e6b38226 196 Gene3D G3DSA:3.30.300.70 1 86 2.0E-23 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal APY29_RS08815 fc96ad5880289436da38fb15e6b38226 196 SUPERFAMILY SSF75420 5 89 2.62E-21 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal APY29_RS08815 fc96ad5880289436da38fb15e6b38226 196 SUPERFAMILY SSF74942 90 159 3.92E-14 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal APY29_RS08815 fc96ad5880289436da38fb15e6b38226 196 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 159 24.524 T 28-03-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 APY29_RS08815 fc96ad5880289436da38fb15e6b38226 196 Pfam PF02576 RimP N-terminal domain 11 89 3.6E-28 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal APY29_RS08815 fc96ad5880289436da38fb15e6b38226 196 Pfam PF17384 RimP C-terminal SH3 domain 92 159 7.1E-21 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal APY29_RS18895 cba61be08d5b306d9a69f0ff0314e6ad 250 Gene3D G3DSA:1.10.10.60 57 96 1.8E-11 T 28-03-2018 APY29_RS18895 cba61be08d5b306d9a69f0ff0314e6ad 250 SUPERFAMILY SSF46689 61 140 7.18E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS18895 cba61be08d5b306d9a69f0ff0314e6ad 250 Pfam PF00440 Bacterial regulatory proteins, tetR family 75 119 5.3E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS18895 cba61be08d5b306d9a69f0ff0314e6ad 250 Gene3D G3DSA:1.10.357.10 126 244 2.8E-4 T 28-03-2018 APY29_RS18895 cba61be08d5b306d9a69f0ff0314e6ad 250 Gene3D G3DSA:1.10.260.40 97 125 2.9E-5 T 28-03-2018 APY29_RS18895 cba61be08d5b306d9a69f0ff0314e6ad 250 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 75 88 4.8E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS18895 cba61be08d5b306d9a69f0ff0314e6ad 250 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 95 118 4.8E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS18895 cba61be08d5b306d9a69f0ff0314e6ad 250 SUPERFAMILY SSF48498 140 240 2.22E-9 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APY29_RS22690 b7fd74875d3f8ec0f309c626018c9e81 305 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 36 305 4.0E-9 T 28-03-2018 IPR010239 Conserved hypothetical protein CHP02001 APY29_RS10465 cfa00805903f497afba1530655e58b7e 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 6.2E-93 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10465 cfa00805903f497afba1530655e58b7e 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 6.2E-93 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10465 cfa00805903f497afba1530655e58b7e 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 6.2E-93 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10465 cfa00805903f497afba1530655e58b7e 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 6.2E-93 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10465 cfa00805903f497afba1530655e58b7e 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 6.2E-93 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10465 cfa00805903f497afba1530655e58b7e 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 6.2E-93 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10465 cfa00805903f497afba1530655e58b7e 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 6.2E-93 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10465 cfa00805903f497afba1530655e58b7e 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 6.2E-93 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10465 cfa00805903f497afba1530655e58b7e 645 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 636 9.7E-222 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10465 cfa00805903f497afba1530655e58b7e 645 Pfam PF01578 Cytochrome C assembly protein 89 295 1.9E-51 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APY29_RS10465 cfa00805903f497afba1530655e58b7e 645 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 634 1.2E-114 T 28-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal APY29_RS10465 cfa00805903f497afba1530655e58b7e 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 355 372 7.7E-48 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10465 cfa00805903f497afba1530655e58b7e 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 398 417 7.7E-48 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10465 cfa00805903f497afba1530655e58b7e 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 7.7E-48 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10465 cfa00805903f497afba1530655e58b7e 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 7.7E-48 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10465 cfa00805903f497afba1530655e58b7e 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 627 640 7.7E-48 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10465 cfa00805903f497afba1530655e58b7e 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 7.7E-48 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS07995 eab32029b00eaf26e273090aff985130 687 Pfam PF00593 TonB dependent receptor 216 684 1.9E-41 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS07995 eab32029b00eaf26e273090aff985130 687 Gene3D G3DSA:2.170.130.10 55 184 3.8E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS07995 eab32029b00eaf26e273090aff985130 687 SUPERFAMILY SSF56935 61 687 3.66E-94 T 28-03-2018 APY29_RS07995 eab32029b00eaf26e273090aff985130 687 Gene3D G3DSA:2.40.170.20 191 687 6.2E-48 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS07995 eab32029b00eaf26e273090aff985130 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 77 179 3.6E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS07935 c1ad49fc2eb2fd0e6155f2226c0be5f8 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 42 1.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS07935 c1ad49fc2eb2fd0e6155f2226c0be5f8 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 52 1.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS07935 c1ad49fc2eb2fd0e6155f2226c0be5f8 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 63 1.4E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS07935 c1ad49fc2eb2fd0e6155f2226c0be5f8 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 74 3.7E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS07935 c1ad49fc2eb2fd0e6155f2226c0be5f8 309 Pfam PF03466 LysR substrate binding domain 100 305 1.0E-37 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS07935 c1ad49fc2eb2fd0e6155f2226c0be5f8 309 SUPERFAMILY SSF46785 15 100 6.33E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS07935 c1ad49fc2eb2fd0e6155f2226c0be5f8 309 Gene3D G3DSA:3.40.190.10 190 277 8.0E-27 T 28-03-2018 APY29_RS07935 c1ad49fc2eb2fd0e6155f2226c0be5f8 309 Gene3D G3DSA:1.10.10.10 2 99 2.1E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS07935 c1ad49fc2eb2fd0e6155f2226c0be5f8 309 SUPERFAMILY SSF53850 100 305 1.07E-40 T 28-03-2018 APY29_RS07935 c1ad49fc2eb2fd0e6155f2226c0be5f8 309 Gene3D G3DSA:3.40.190.10 104 189 8.9E-11 T 28-03-2018 APY29_RS05745 42def7c5d6a93992ef145590645971e3 620 SUPERFAMILY SSF116726 240 313 2.62E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APY29_RS05745 42def7c5d6a93992ef145590645971e3 620 Gene3D G3DSA:3.30.70.1450 334 408 3.0E-15 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APY29_RS05745 42def7c5d6a93992ef145590645971e3 620 Gene3D G3DSA:3.30.70.1450 233 316 7.1E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APY29_RS05745 42def7c5d6a93992ef145590645971e3 620 Pfam PF03600 Citrate transporter 23 563 4.5E-47 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 APY29_RS05745 42def7c5d6a93992ef145590645971e3 620 Pfam PF02080 TrkA-C domain 338 393 8.1E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APY29_RS05745 42def7c5d6a93992ef145590645971e3 620 Pfam PF02080 TrkA-C domain 246 313 7.4E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APY29_RS05745 42def7c5d6a93992ef145590645971e3 620 SUPERFAMILY SSF116726 337 413 1.23E-14 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APY29_RS04170 234fbd41e848ece237a5a7f868e83c3e 318 Pfam PF01370 NAD dependent epimerase/dehydratase family 14 236 1.8E-40 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 APY29_RS04170 234fbd41e848ece237a5a7f868e83c3e 318 Gene3D G3DSA:3.40.50.720 3 195 9.3E-33 T 28-03-2018 APY29_RS04170 234fbd41e848ece237a5a7f868e83c3e 318 SUPERFAMILY SSF51735 6 313 2.26E-63 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS04170 234fbd41e848ece237a5a7f868e83c3e 318 Gene3D G3DSA:3.90.25.10 196 317 5.0E-24 T 28-03-2018 APY29_RS17445 67415560bb6deab03812dc5a59dd3805 317 Gene3D G3DSA:3.40.50.300 30 196 4.4E-22 T 28-03-2018 APY29_RS17445 67415560bb6deab03812dc5a59dd3805 317 Gene3D G3DSA:1.10.8.300 211 314 3.2E-22 T 28-03-2018 APY29_RS17445 67415560bb6deab03812dc5a59dd3805 317 PIRSF PIRSF002849 1 317 4.4E-120 T 28-03-2018 APY29_RS17445 67415560bb6deab03812dc5a59dd3805 317 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 49 179 4.6E-63 T 28-03-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 APY29_RS17445 67415560bb6deab03812dc5a59dd3805 317 SUPERFAMILY SSF52540 20 292 1.69E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17445 67415560bb6deab03812dc5a59dd3805 317 SMART SM00382 46 187 0.005 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS02740 35b943693d9b9050dbf636e6ca69f3cd 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 22.259 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS02740 35b943693d9b9050dbf636e6ca69f3cd 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 4.1E-16 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS02740 35b943693d9b9050dbf636e6ca69f3cd 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 4.1E-16 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS02740 35b943693d9b9050dbf636e6ca69f3cd 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 4.1E-16 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS02740 35b943693d9b9050dbf636e6ca69f3cd 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 4.1E-16 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS02740 35b943693d9b9050dbf636e6ca69f3cd 71 Gene3D G3DSA:1.20.5.1150 16 52 1.0E-17 T 28-03-2018 APY29_RS02740 35b943693d9b9050dbf636e6ca69f3cd 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 3.8E-24 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS02740 35b943693d9b9050dbf636e6ca69f3cd 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 28-03-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS02740 35b943693d9b9050dbf636e6ca69f3cd 71 Pfam PF01165 Ribosomal protein S21 3 56 5.6E-22 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS02740 35b943693d9b9050dbf636e6ca69f3cd 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 44 1.0E-9 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS20565 61f75414089ca053dfcd6cd238595e74 300 Gene3D G3DSA:3.40.190.10 182 263 1.5E-19 T 28-03-2018 APY29_RS20565 61f75414089ca053dfcd6cd238595e74 300 Gene3D G3DSA:1.10.10.10 1 80 2.1E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS20565 61f75414089ca053dfcd6cd238595e74 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.1E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS20565 61f75414089ca053dfcd6cd238595e74 300 Pfam PF03466 LysR substrate binding domain 89 289 7.9E-40 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS20565 61f75414089ca053dfcd6cd238595e74 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.0E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS20565 61f75414089ca053dfcd6cd238595e74 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.0E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS20565 61f75414089ca053dfcd6cd238595e74 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.0E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS20565 61f75414089ca053dfcd6cd238595e74 300 Gene3D G3DSA:3.40.190.10 81 181 1.2E-21 T 28-03-2018 APY29_RS20565 61f75414089ca053dfcd6cd238595e74 300 SUPERFAMILY SSF46785 3 85 1.16E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS20565 61f75414089ca053dfcd6cd238595e74 300 SUPERFAMILY SSF53850 90 293 8.58E-36 T 28-03-2018 APY29_RS07380 7b7012f535e8d1fa2116ac668673a467 233 SUPERFAMILY SSF52540 13 209 5.94E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS07380 7b7012f535e8d1fa2116ac668673a467 233 Pfam PF00308 Bacterial dnaA protein 18 204 2.9E-5 T 28-03-2018 IPR013317 Chromosomal replication initiator protein DnaA APY29_RS07380 7b7012f535e8d1fa2116ac668673a467 233 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 5 229 6.4E-70 T 28-03-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 APY29_RS07380 7b7012f535e8d1fa2116ac668673a467 233 Gene3D G3DSA:1.10.8.60 164 229 1.3E-10 T 28-03-2018 APY29_RS07380 7b7012f535e8d1fa2116ac668673a467 233 Gene3D G3DSA:3.40.50.300 9 160 5.5E-13 T 28-03-2018 APY29_RS23025 d6e96944f7b51b086c031f80d76114e2 736 Pfam PF04632 Fusaric acid resistance protein family 10 713 3.8E-191 T 28-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 APY29_RS02080 0d62a6539b2a8c9cd3425e0105ce7610 251 Pfam PF06167 Glucose-regulated metallo-peptidase M90 10 240 1.9E-75 T 28-03-2018 IPR010384 MtfA family APY29_RS02080 0d62a6539b2a8c9cd3425e0105ce7610 251 Gene3D G3DSA:3.40.390.10 100 241 6.1E-20 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APY29_RS02080 0d62a6539b2a8c9cd3425e0105ce7610 251 SUPERFAMILY SSF55486 34 241 2.12E-32 T 28-03-2018 APY29_RS18540 a06fafca4591b734a668296142d68035 224 Gene3D G3DSA:1.10.10.10 2 72 4.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS18540 a06fafca4591b734a668296142d68035 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 70 8.1E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS18540 a06fafca4591b734a668296142d68035 224 SUPERFAMILY SSF48008 77 219 2.62E-18 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal APY29_RS18540 a06fafca4591b734a668296142d68035 224 SMART SM00895 80 217 4.7E-19 T 28-03-2018 IPR011711 GntR, C-terminal APY29_RS18540 a06fafca4591b734a668296142d68035 224 Pfam PF07729 FCD domain 81 215 1.2E-17 T 28-03-2018 IPR011711 GntR, C-terminal APY29_RS18540 a06fafca4591b734a668296142d68035 224 SMART SM00345 12 70 8.1E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS18540 a06fafca4591b734a668296142d68035 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 1.7E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS18540 a06fafca4591b734a668296142d68035 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 1.7E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS18540 a06fafca4591b734a668296142d68035 224 SUPERFAMILY SSF46785 9 88 5.46E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS18540 a06fafca4591b734a668296142d68035 224 Gene3D G3DSA:1.20.120.530 73 222 7.6E-23 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal APY29_RS12625 120e575be90a66d76ed61e97420636be 838 Gene3D G3DSA:3.30.450.20 269 386 3.2E-13 T 28-03-2018 APY29_RS12625 120e575be90a66d76ed61e97420636be 838 SUPERFAMILY SSF141868 575 823 2.09E-83 T 28-03-2018 IPR001633 EAL domain APY29_RS12625 120e575be90a66d76ed61e97420636be 838 Pfam PF13426 PAS domain 325 386 0.092 T 28-03-2018 IPR000014 PAS domain APY29_RS12625 120e575be90a66d76ed61e97420636be 838 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 142 1.3E-11 T 28-03-2018 IPR000014 PAS domain APY29_RS12625 120e575be90a66d76ed61e97420636be 838 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 289 394 1.1E-6 T 28-03-2018 IPR000014 PAS domain APY29_RS12625 120e575be90a66d76ed61e97420636be 838 SMART SM00091 17 85 6.7E-7 T 28-03-2018 IPR000014 PAS domain APY29_RS12625 120e575be90a66d76ed61e97420636be 838 SMART SM00091 147 214 0.64 T 28-03-2018 IPR000014 PAS domain APY29_RS12625 120e575be90a66d76ed61e97420636be 838 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 396 559 2.4E-39 T 28-03-2018 IPR000160 GGDEF domain APY29_RS12625 120e575be90a66d76ed61e97420636be 838 SMART SM00052 570 816 5.5E-106 T 28-03-2018 IPR001633 EAL domain APY29_RS12625 120e575be90a66d76ed61e97420636be 838 SUPERFAMILY SSF55073 404 562 5.41E-47 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS12625 120e575be90a66d76ed61e97420636be 838 SMART SM00267 388 560 2.6E-57 T 28-03-2018 IPR000160 GGDEF domain APY29_RS12625 120e575be90a66d76ed61e97420636be 838 SUPERFAMILY SSF55785 23 136 4.36E-22 T 28-03-2018 IPR000014 PAS domain APY29_RS12625 120e575be90a66d76ed61e97420636be 838 Gene3D G3DSA:3.30.450.20 14 148 6.3E-31 T 28-03-2018 APY29_RS12625 120e575be90a66d76ed61e97420636be 838 SUPERFAMILY SSF55785 133 261 3.14E-12 T 28-03-2018 IPR000014 PAS domain APY29_RS12625 120e575be90a66d76ed61e97420636be 838 Pfam PF08447 PAS fold 40 129 1.1E-22 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 APY29_RS12625 120e575be90a66d76ed61e97420636be 838 Gene3D G3DSA:3.30.450.20 149 268 7.5E-15 T 28-03-2018 APY29_RS12625 120e575be90a66d76ed61e97420636be 838 SUPERFAMILY SSF55785 291 396 2.42E-12 T 28-03-2018 IPR000014 PAS domain APY29_RS12625 120e575be90a66d76ed61e97420636be 838 Pfam PF00563 EAL domain 577 811 8.6E-66 T 28-03-2018 IPR001633 EAL domain APY29_RS12625 120e575be90a66d76ed61e97420636be 838 Pfam PF00990 Diguanylate cyclase, GGDEF domain 399 556 9.5E-46 T 28-03-2018 IPR000160 GGDEF domain APY29_RS12625 120e575be90a66d76ed61e97420636be 838 Gene3D G3DSA:3.30.70.270 400 569 3.0E-56 T 28-03-2018 APY29_RS12625 120e575be90a66d76ed61e97420636be 838 Gene3D G3DSA:3.20.20.450 570 830 2.4E-91 T 28-03-2018 IPR001633 EAL domain APY29_RS12625 120e575be90a66d76ed61e97420636be 838 SMART SM00086 347 388 5.7E-4 T 28-03-2018 IPR001610 PAC motif APY29_RS12625 120e575be90a66d76ed61e97420636be 838 SMART SM00086 220 263 470.0 T 28-03-2018 IPR001610 PAC motif APY29_RS12625 120e575be90a66d76ed61e97420636be 838 SMART SM00086 92 135 1.7E-7 T 28-03-2018 IPR001610 PAC motif APY29_RS14540 fcf6f7e1ac8eac17a7dcfaa39ec03b9f 456 Pfam PF01979 Amidohydrolase family 51 430 6.2E-27 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 APY29_RS14540 fcf6f7e1ac8eac17a7dcfaa39ec03b9f 456 SUPERFAMILY SSF51338 366 452 8.02E-10 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS14540 fcf6f7e1ac8eac17a7dcfaa39ec03b9f 456 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 6 454 1.0E-216 T 28-03-2018 IPR010252 Formiminoglutamate deiminase APY29_RS14540 fcf6f7e1ac8eac17a7dcfaa39ec03b9f 456 Gene3D G3DSA:3.20.20.140 46 380 1.0E-41 T 28-03-2018 APY29_RS14540 fcf6f7e1ac8eac17a7dcfaa39ec03b9f 456 SUPERFAMILY SSF51556 54 378 4.54E-68 T 28-03-2018 IPR032466 Metal-dependent hydrolase APY29_RS13675 29698928ab7fc72a5d1dd19a1a056be6 188 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 147 164 1.8E-9 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS13675 29698928ab7fc72a5d1dd19a1a056be6 188 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 164 184 1.8E-9 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS13675 29698928ab7fc72a5d1dd19a1a056be6 188 SUPERFAMILY SSF46689 90 180 3.99E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS13675 29698928ab7fc72a5d1dd19a1a056be6 188 SUPERFAMILY SSF52172 10 119 5.83E-28 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS13675 29698928ab7fc72a5d1dd19a1a056be6 188 Gene3D G3DSA:3.40.50.2300 3 112 1.1E-25 T 28-03-2018 APY29_RS13675 29698928ab7fc72a5d1dd19a1a056be6 188 SMART SM00448 7 118 1.7E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS13675 29698928ab7fc72a5d1dd19a1a056be6 188 Pfam PF02954 Bacterial regulatory protein, Fis family 147 180 1.1E-12 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS13675 29698928ab7fc72a5d1dd19a1a056be6 188 Pfam PF00072 Response regulator receiver domain 10 117 1.2E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS13675 29698928ab7fc72a5d1dd19a1a056be6 188 Gene3D G3DSA:1.10.10.60 113 181 6.7E-15 T 28-03-2018 APY29_RS14505 a0554051d218b16d229f71d62c585d79 218 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 6 206 22.455 T 28-03-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 APY29_RS14505 a0554051d218b16d229f71d62c585d79 218 Pfam PF01794 Ferric reductase like transmembrane component 53 167 3.7E-19 T 28-03-2018 IPR013130 Ferric reductase transmembrane component-like domain APY29_RS01610 306037cc125ed9fae8425203722aa0e4 297 SUPERFAMILY SSF55298 165 293 6.06E-8 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APY29_RS01610 306037cc125ed9fae8425203722aa0e4 297 Gene3D G3DSA:3.30.1330.40 160 295 4.1E-16 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APY29_RS06470 cbf29c9ea3dbef94a7978341fcc7d011 1373 Pfam PF04408 Helicase associated domain (HA2) 479 557 8.4E-18 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 APY29_RS06470 cbf29c9ea3dbef94a7978341fcc7d011 1373 Gene3D G3DSA:3.40.50.300 253 435 2.7E-44 T 28-03-2018 APY29_RS06470 cbf29c9ea3dbef94a7978341fcc7d011 1373 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 46 622 2.1E-268 T 28-03-2018 IPR010222 RNA helicase HrpA GO:0004004 APY29_RS06470 cbf29c9ea3dbef94a7978341fcc7d011 1373 SMART SM00382 92 382 1.4E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS06470 cbf29c9ea3dbef94a7978341fcc7d011 1373 SUPERFAMILY SSF52540 77 613 5.63E-101 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS06470 cbf29c9ea3dbef94a7978341fcc7d011 1373 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 703 777 4.0E-13 T 28-03-2018 IPR011709 Domain of unknown function DUF1605 APY29_RS06470 cbf29c9ea3dbef94a7978341fcc7d011 1373 SMART SM00490 316 416 7.3E-14 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS06470 cbf29c9ea3dbef94a7978341fcc7d011 1373 SMART SM00487 68 259 3.0E-28 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APY29_RS06470 cbf29c9ea3dbef94a7978341fcc7d011 1373 Pfam PF00271 Helicase conserved C-terminal domain 295 415 2.5E-10 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS06470 cbf29c9ea3dbef94a7978341fcc7d011 1373 Pfam PF11898 Domain of unknown function (DUF3418) 793 1369 2.5E-175 T 28-03-2018 IPR024590 RNA helicase HrpA, C-terminal APY29_RS06470 cbf29c9ea3dbef94a7978341fcc7d011 1373 SMART SM00847 476 566 1.4E-33 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 APY29_RS06470 cbf29c9ea3dbef94a7978341fcc7d011 1373 Gene3D G3DSA:3.40.50.300 76 235 1.3E-30 T 28-03-2018 APY29_RS06470 cbf29c9ea3dbef94a7978341fcc7d011 1373 Pfam PF00270 DEAD/DEAH box helicase 84 233 3.3E-7 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APY29_RS15465 8d91857078d3e2b958c5bf1d2acf01ce 259 Gene3D G3DSA:2.40.30.10 2 97 3.0E-17 T 28-03-2018 APY29_RS15465 8d91857078d3e2b958c5bf1d2acf01ce 259 Pfam PF00175 Oxidoreductase NAD-binding domain 113 229 1.7E-7 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APY29_RS15465 8d91857078d3e2b958c5bf1d2acf01ce 259 Gene3D G3DSA:3.40.50.80 98 259 1.8E-20 T 28-03-2018 APY29_RS15465 8d91857078d3e2b958c5bf1d2acf01ce 259 SUPERFAMILY SSF63380 8 100 8.6E-25 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APY29_RS15465 8d91857078d3e2b958c5bf1d2acf01ce 259 SUPERFAMILY SSF52343 104 257 1.02E-39 T 28-03-2018 APY29_RS15465 8d91857078d3e2b958c5bf1d2acf01ce 259 Pfam PF00970 Oxidoreductase FAD-binding domain 19 98 1.7E-6 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 APY29_RS19130 b75b7b36820c06c87574df1d5f162ff8 461 Gene3D G3DSA:1.10.45.10 418 457 7.1E-17 T 28-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 APY29_RS19130 b75b7b36820c06c87574df1d5f162ff8 461 Gene3D G3DSA:3.30.465.10 96 241 3.6E-42 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APY29_RS19130 b75b7b36820c06c87574df1d5f162ff8 461 Gene3D G3DSA:3.30.43.10 2 95 1.5E-24 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APY29_RS19130 b75b7b36820c06c87574df1d5f162ff8 461 SUPERFAMILY SSF56176 9 217 2.99E-71 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APY29_RS19130 b75b7b36820c06c87574df1d5f162ff8 461 SUPERFAMILY SSF55103 192 460 1.96E-64 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 APY29_RS19130 b75b7b36820c06c87574df1d5f162ff8 461 Pfam PF02913 FAD linked oxidases, C-terminal domain 225 457 5.0E-67 T 28-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 APY29_RS19130 b75b7b36820c06c87574df1d5f162ff8 461 Pfam PF01565 FAD binding domain 43 182 2.1E-43 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APY29_RS03320 e27290bc494cc20b85c435ad88b404b1 223 Pfam PF00691 OmpA family 92 196 1.2E-19 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS03320 e27290bc494cc20b85c435ad88b404b1 223 Gene3D G3DSA:3.30.1330.60 41 221 1.7E-35 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS03320 e27290bc494cc20b85c435ad88b404b1 223 SUPERFAMILY SSF103088 82 200 5.1E-29 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS05220 b362551df289fea26e29b99a4d11e3ab 99 SUPERFAMILY SSF102829 7 94 1.31E-23 T 28-03-2018 IPR007838 Cell division protein ZapA-like APY29_RS05220 b362551df289fea26e29b99a4d11e3ab 99 Pfam PF05164 Cell division protein ZapA 7 91 1.5E-20 T 28-03-2018 IPR007838 Cell division protein ZapA-like APY29_RS02710 981ccaa5e1d061db6424017f547858a6 524 SUPERFAMILY SSF52833 49 158 1.23E-21 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS02710 981ccaa5e1d061db6424017f547858a6 524 Gene3D G3DSA:3.40.30.10 25 161 2.0E-21 T 28-03-2018 APY29_RS02710 981ccaa5e1d061db6424017f547858a6 524 Pfam PF13899 Thioredoxin-like 52 131 1.3E-14 T 28-03-2018 APY29_RS02710 981ccaa5e1d061db6424017f547858a6 524 Gene3D G3DSA:1.25.40.10 162 430 2.3E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS13790 60063a005910850a7b02566d0254b481 481 SUPERFAMILY SSF103473 15 480 5.89E-70 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS13790 60063a005910850a7b02566d0254b481 481 Gene3D G3DSA:1.20.1250.20 18 230 3.4E-34 T 28-03-2018 APY29_RS13790 60063a005910850a7b02566d0254b481 481 Gene3D G3DSA:1.20.1250.20 249 481 9.5E-34 T 28-03-2018 APY29_RS13790 60063a005910850a7b02566d0254b481 481 ProSitePatterns PS00216 Sugar transport proteins signature 1. 82 99 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APY29_RS13790 60063a005910850a7b02566d0254b481 481 PRINTS PR00171 Sugar transporter signature 36 46 1.6E-24 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 APY29_RS13790 60063a005910850a7b02566d0254b481 481 PRINTS PR00171 Sugar transporter signature 384 405 1.6E-24 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 APY29_RS13790 60063a005910850a7b02566d0254b481 481 PRINTS PR00171 Sugar transporter signature 287 297 1.6E-24 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 APY29_RS13790 60063a005910850a7b02566d0254b481 481 PRINTS PR00171 Sugar transporter signature 119 138 1.6E-24 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 APY29_RS13790 60063a005910850a7b02566d0254b481 481 PRINTS PR00171 Sugar transporter signature 407 419 1.6E-24 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 APY29_RS13790 60063a005910850a7b02566d0254b481 481 Pfam PF00083 Sugar (and other) transporter 30 480 3.8E-110 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APY29_RS13790 60063a005910850a7b02566d0254b481 481 ProSitePatterns PS00217 Sugar transport proteins signature 2. 124 149 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APY29_RS13790 60063a005910850a7b02566d0254b481 481 ProSitePatterns PS00216 Sugar transport proteins signature 1. 331 348 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APY29_RS13790 60063a005910850a7b02566d0254b481 481 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 18 479 6.9E-111 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF05594 Haemagluttinin repeat 2312 2384 0.0072 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF05594 Haemagluttinin repeat 1635 1687 0.49 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF05594 Haemagluttinin repeat 3156 3270 3.7E-7 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF05594 Haemagluttinin repeat 2519 2585 3.4 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF05594 Haemagluttinin repeat 1305 1375 4.9E-4 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF05594 Haemagluttinin repeat 482 537 0.013 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF05594 Haemagluttinin repeat 1895 1980 0.0019 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF05594 Haemagluttinin repeat 602 690 0.011 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF05594 Haemagluttinin repeat 1813 1892 0.55 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF05594 Haemagluttinin repeat 345 441 0.0031 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF05594 Haemagluttinin repeat 2439 2503 0.39 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF05594 Haemagluttinin repeat 740 817 5.8E-6 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF05594 Haemagluttinin repeat 224 302 6.9E-7 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF05594 Haemagluttinin repeat 1041 1115 5.1E-5 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF05594 Haemagluttinin repeat 1558 1633 8.2E-8 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF05594 Haemagluttinin repeat 1219 1295 0.48 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF05594 Haemagluttinin repeat 2153 2230 0.65 T 28-03-2018 IPR008619 Filamentous haemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 SMART SM00912 56 176 4.3E-44 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 SUPERFAMILY SSF51126 47 343 3.77E-57 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 3153 3401 0.009 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 3601 3812 0.061 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF05860 haemagglutination activity domain 44 173 3.1E-32 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 956 996 0.36 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1554 1593 1.1E-4 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2214 2252 0.12 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 797 832 0.18 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 778 817 0.0097 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2517 2554 0.074 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1535 1569 0.05 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 500 535 0.029 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 538 573 0.054 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2263 2290 0.83 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1315 1351 1.0 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2237 2258 0.14 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2110 2147 0.0058 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 660 693 0.42 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 697 737 1.8E-4 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1000 1037 0.14 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1793 1828 0.078 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1296 1335 0.42 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 642 674 0.65 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 738 778 0.045 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2300 2342 0.51 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2343 2384 0.22 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1518 1554 0.41 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1059 1091 0.073 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1037 1076 0.015 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2042 2078 0.0041 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2426 2467 1.2E-5 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2575 2612 0.063 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1752 1791 0.87 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2171 2209 7.3E-5 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2386 2425 0.054 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 3233 3270 0.0049 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1277 1311 2.7 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2322 2362 0.001 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1576 1608 0.0036 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 3330 3363 0.84 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 461 494 1.3 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 74 171 3.4E-18 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF13332 Haemagluttinin repeat 3847 4009 1.8E-38 T 28-03-2018 IPR025157 Hemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF13332 Haemagluttinin repeat 3711 3799 0.0035 T 28-03-2018 IPR025157 Hemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF13332 Haemagluttinin repeat 3406 3462 7.7E-5 T 28-03-2018 IPR025157 Hemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF13332 Haemagluttinin repeat 3540 3684 4.6E-10 T 28-03-2018 IPR025157 Hemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF13332 Haemagluttinin repeat 3301 3339 0.0088 T 28-03-2018 IPR025157 Hemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Pfam PF13332 Haemagluttinin repeat 3469 3525 0.0017 T 28-03-2018 IPR025157 Hemagglutinin repeat APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 1928 2052 1.0E-5 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 1462 1536 3.1E-4 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 43 338 1.1E-59 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 432 508 7.2E-5 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 1806 1927 1.7E-5 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 993 1066 7.9E-6 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 2053 2222 0.016 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 1269 1370 2.2E-7 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 1537 1582 0.0014 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 2439 2571 5.5E-6 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 1583 1647 0.02 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 702 769 1.4E-5 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 1719 1805 0.01 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 2223 2373 1.4E-5 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 593 701 8.0E-4 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 1200 1268 1.8E-4 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 848 952 6.7E-5 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 1371 1461 9.0E-4 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 2374 2438 0.16 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 770 847 1.9E-4 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 509 592 9.9E-8 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 339 431 0.015 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 1067 1199 9.1E-5 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS13565 54c882a51f1b99d78bbb12a7f3f0fbb9 4016 Gene3D G3DSA:2.160.20.10 1648 1718 6.5E-4 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS12115 fcc715c8215fc7c91258a70d5411e334 85 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 40 59 5.9E-6 T 28-03-2018 IPR019626 Stress-induced protein, KGG, repeat APY29_RS17685 f2f4ce1b3351a3185ff6e953b8098644 508 SUPERFAMILY SSF53067 17 137 3.37E-32 T 28-03-2018 APY29_RS17685 f2f4ce1b3351a3185ff6e953b8098644 508 Gene3D G3DSA:3.30.420.150 139 319 2.6E-36 T 28-03-2018 APY29_RS17685 f2f4ce1b3351a3185ff6e953b8098644 508 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 17 312 1.1E-98 T 28-03-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 APY29_RS17685 f2f4ce1b3351a3185ff6e953b8098644 508 Gene3D G3DSA:3.30.420.40 10 137 1.6E-34 T 28-03-2018 APY29_RS17685 f2f4ce1b3351a3185ff6e953b8098644 508 SUPERFAMILY SSF109604 319 496 1.26E-47 T 28-03-2018 APY29_RS17685 f2f4ce1b3351a3185ff6e953b8098644 508 SUPERFAMILY SSF53067 142 314 1.88E-43 T 28-03-2018 APY29_RS17685 f2f4ce1b3351a3185ff6e953b8098644 508 PIRSF PIRSF001267 7 508 3.8E-201 T 28-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 APY29_RS17685 f2f4ce1b3351a3185ff6e953b8098644 508 Pfam PF02541 Ppx/GppA phosphatase family 30 313 7.3E-65 T 28-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 APY29_RS01675 0b027a70f626ccc0252c74bb5848bb92 243 SUPERFAMILY SSF51735 6 242 1.05E-70 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS01675 0b027a70f626ccc0252c74bb5848bb92 243 Gene3D G3DSA:3.40.50.10090 1 45 4.0E-6 T 28-03-2018 APY29_RS01675 0b027a70f626ccc0252c74bb5848bb92 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 242 1.4E-50 T 28-03-2018 APY29_RS01675 0b027a70f626ccc0252c74bb5848bb92 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.6E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS01675 0b027a70f626ccc0252c74bb5848bb92 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.6E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS01675 0b027a70f626ccc0252c74bb5848bb92 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.6E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS01675 0b027a70f626ccc0252c74bb5848bb92 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.1E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS01675 0b027a70f626ccc0252c74bb5848bb92 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.1E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS01675 0b027a70f626ccc0252c74bb5848bb92 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 5.1E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS01675 0b027a70f626ccc0252c74bb5848bb92 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.1E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS01675 0b027a70f626ccc0252c74bb5848bb92 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 5.1E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS01675 0b027a70f626ccc0252c74bb5848bb92 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 5.1E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS01675 0b027a70f626ccc0252c74bb5848bb92 243 Gene3D G3DSA:3.40.50.720 46 243 3.4E-59 T 28-03-2018 APY29_RS01675 0b027a70f626ccc0252c74bb5848bb92 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 190 8.5E-8 T 28-03-2018 APY29_RS13740 b3e040fc9c940a32887d66bab93f9c6c 280 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 3 278 7.0E-88 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 APY29_RS13740 b3e040fc9c940a32887d66bab93f9c6c 280 SUPERFAMILY SSF52374 3 279 1.31E-99 T 28-03-2018 APY29_RS13740 b3e040fc9c940a32887d66bab93f9c6c 280 Hamap MF_00158 Pantothenate synthetase [panC]. 3 280 38.281 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 APY29_RS13740 b3e040fc9c940a32887d66bab93f9c6c 280 Pfam PF02569 Pantoate-beta-alanine ligase 4 278 8.5E-95 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 APY29_RS13740 b3e040fc9c940a32887d66bab93f9c6c 280 Gene3D G3DSA:3.40.50.620 1 176 4.7E-70 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS13740 b3e040fc9c940a32887d66bab93f9c6c 280 Gene3D G3DSA:3.30.1300.10 178 280 3.1E-27 T 28-03-2018 APY29_RS17070 7bf5ba45c32791c45da5e91643945d41 354 SUPERFAMILY SSF56176 3 229 2.07E-56 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APY29_RS17070 7bf5ba45c32791c45da5e91643945d41 354 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 237 334 4.1E-18 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal APY29_RS17070 7bf5ba45c32791c45da5e91643945d41 354 Gene3D G3DSA:3.30.390.50 233 343 7.4E-25 T 28-03-2018 APY29_RS17070 7bf5ba45c32791c45da5e91643945d41 354 Gene3D G3DSA:3.30.43.10 1 61 8.3E-19 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APY29_RS17070 7bf5ba45c32791c45da5e91643945d41 354 Gene3D G3DSA:3.30.465.10 66 230 1.0E-32 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APY29_RS17070 7bf5ba45c32791c45da5e91643945d41 354 SUPERFAMILY SSF55447 236 337 4.32E-27 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal APY29_RS17070 7bf5ba45c32791c45da5e91643945d41 354 SMART SM01092 237 336 3.0E-29 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal APY29_RS17070 7bf5ba45c32791c45da5e91643945d41 354 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 229 2.2E-45 T 28-03-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 APY29_RS05930 4ee3bd8b38652de7c5490da3052ea701 464 Pfam PF02954 Bacterial regulatory protein, Fis family 421 461 1.2E-14 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS05930 4ee3bd8b38652de7c5490da3052ea701 464 SUPERFAMILY SSF52540 142 383 1.27E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS05930 4ee3bd8b38652de7c5490da3052ea701 464 SMART SM00382 161 304 1.1E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS05930 4ee3bd8b38652de7c5490da3052ea701 464 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APY29_RS05930 4ee3bd8b38652de7c5490da3052ea701 464 SMART SM00448 5 116 1.0E-33 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS05930 4ee3bd8b38652de7c5490da3052ea701 464 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site APY29_RS05930 4ee3bd8b38652de7c5490da3052ea701 464 SUPERFAMILY SSF52172 4 184 3.27E-42 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS05930 4ee3bd8b38652de7c5490da3052ea701 464 Gene3D G3DSA:3.40.50.2300 1 137 3.9E-33 T 28-03-2018 APY29_RS05930 4ee3bd8b38652de7c5490da3052ea701 464 SUPERFAMILY SSF46689 355 463 3.67E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS05930 4ee3bd8b38652de7c5490da3052ea701 464 Gene3D G3DSA:1.10.8.60 314 419 7.2E-22 T 28-03-2018 APY29_RS05930 4ee3bd8b38652de7c5490da3052ea701 464 Gene3D G3DSA:1.10.10.60 420 464 8.7E-16 T 28-03-2018 APY29_RS05930 4ee3bd8b38652de7c5490da3052ea701 464 Gene3D G3DSA:3.40.50.300 138 313 7.6E-26 T 28-03-2018 APY29_RS05930 4ee3bd8b38652de7c5490da3052ea701 464 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APY29_RS05930 4ee3bd8b38652de7c5490da3052ea701 464 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 444 464 2.1E-10 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS05930 4ee3bd8b38652de7c5490da3052ea701 464 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 444 2.1E-10 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS05930 4ee3bd8b38652de7c5490da3052ea701 464 Pfam PF00158 Sigma-54 interaction domain 142 307 3.3E-66 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APY29_RS05930 4ee3bd8b38652de7c5490da3052ea701 464 Pfam PF00072 Response regulator receiver domain 8 114 8.8E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS17440 d7a62309dc7bc412ea4f67260c1488c6 617 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 51 211 3.6E-15 T 28-03-2018 APY29_RS03740 fe51961e03eef86527a888512a92b0c6 275 Gene3D G3DSA:3.40.50.1820 5 267 5.8E-24 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS03740 fe51961e03eef86527a888512a92b0c6 275 Pfam PF12146 Serine aminopeptidase, S33 27 153 1.4E-8 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 APY29_RS03740 fe51961e03eef86527a888512a92b0c6 275 SUPERFAMILY SSF53474 15 266 1.61E-23 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS22500 59013905ee4d1d08b7f5f51271ca5325 302 SUPERFAMILY SSF55681 10 293 4.47E-132 T 28-03-2018 APY29_RS22500 59013905ee4d1d08b7f5f51271ca5325 302 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 10 301 1.2E-158 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APY29_RS22500 59013905ee4d1d08b7f5f51271ca5325 302 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 11 293 1.2E-146 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APY29_RS22500 59013905ee4d1d08b7f5f51271ca5325 302 Gene3D G3DSA:1.20.58.180 219 295 5.4E-33 T 28-03-2018 APY29_RS22500 59013905ee4d1d08b7f5f51271ca5325 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 63 78 1.9E-67 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APY29_RS22500 59013905ee4d1d08b7f5f51271ca5325 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 141 161 1.9E-67 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APY29_RS22500 59013905ee4d1d08b7f5f51271ca5325 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 164 179 1.9E-67 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APY29_RS22500 59013905ee4d1d08b7f5f51271ca5325 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 1.9E-67 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APY29_RS22500 59013905ee4d1d08b7f5f51271ca5325 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 115 139 1.9E-67 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APY29_RS22500 59013905ee4d1d08b7f5f51271ca5325 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 104 1.9E-67 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APY29_RS22500 59013905ee4d1d08b7f5f51271ca5325 302 Gene3D G3DSA:3.30.930.10 1 217 2.9E-85 T 28-03-2018 APY29_RS22500 59013905ee4d1d08b7f5f51271ca5325 302 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 9 294 59.504 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APY29_RS22250 2e843a60131c7e04b08c5029b3833c00 672 SUPERFAMILY SSF56024 514 590 8.03E-23 T 28-03-2018 APY29_RS22250 2e843a60131c7e04b08c5029b3833c00 672 SUPERFAMILY SSF56024 329 419 8.03E-23 T 28-03-2018 APY29_RS22250 2e843a60131c7e04b08c5029b3833c00 672 Pfam PF13091 PLD-like domain 91 245 2.2E-18 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 APY29_RS22250 2e843a60131c7e04b08c5029b3833c00 672 Pfam PF13091 PLD-like domain 520 571 2.0E-9 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 APY29_RS22250 2e843a60131c7e04b08c5029b3833c00 672 SMART SM00155 517 544 0.018 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 APY29_RS22250 2e843a60131c7e04b08c5029b3833c00 672 SMART SM00155 186 213 0.0037 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 APY29_RS22250 2e843a60131c7e04b08c5029b3833c00 672 Gene3D G3DSA:3.30.870.10 16 260 2.1E-32 T 28-03-2018 APY29_RS22250 2e843a60131c7e04b08c5029b3833c00 672 Gene3D G3DSA:3.30.870.10 317 588 2.5E-17 T 28-03-2018 APY29_RS22250 2e843a60131c7e04b08c5029b3833c00 672 SUPERFAMILY SSF56024 64 258 2.2E-38 T 28-03-2018 APY29_RS12555 7e80a9f5782b3396bf9c4602fbca7fd0 209 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 5 204 2.2E-20 T 28-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 APY29_RS12555 7e80a9f5782b3396bf9c4602fbca7fd0 209 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 8 207 31.387 T 28-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 APY29_RS12555 7e80a9f5782b3396bf9c4602fbca7fd0 209 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 197 1.8E-51 T 28-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like APY29_RS12555 7e80a9f5782b3396bf9c4602fbca7fd0 209 SUPERFAMILY SSF89392 23 205 5.1E-43 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX APY29_RS12555 7e80a9f5782b3396bf9c4602fbca7fd0 209 Gene3D G3DSA:2.50.20.10 21 207 3.5E-37 T 28-03-2018 APY29_RS15455 7ae74620a2a4c1c21be0b6f83e1dbdef 517 SUPERFAMILY SSF117457 328 499 3.66E-62 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APY29_RS15455 7ae74620a2a4c1c21be0b6f83e1dbdef 517 Pfam PF05681 Fumarate hydratase (Fumerase) 23 297 3.9E-100 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 APY29_RS15455 7ae74620a2a4c1c21be0b6f83e1dbdef 517 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 24 297 1.3E-63 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 APY29_RS15455 7ae74620a2a4c1c21be0b6f83e1dbdef 517 Gene3D G3DSA:3.20.130.10 326 499 9.9E-66 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APY29_RS15455 7ae74620a2a4c1c21be0b6f83e1dbdef 517 PIRSF PIRSF001394 8 517 5.2E-219 T 28-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 APY29_RS15455 7ae74620a2a4c1c21be0b6f83e1dbdef 517 Pfam PF05683 Fumarase C-terminus 301 500 9.5E-79 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APY29_RS15455 7ae74620a2a4c1c21be0b6f83e1dbdef 517 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 337 499 1.6E-48 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APY29_RS07715 e49d285e4b7d8b95c19af6f0c112f553 74 Pfam PF04328 Selenoprotein, putative 14 74 3.5E-26 T 28-03-2018 IPR007423 Selenoprotein, putative APY29_RS10815 85dac3cd65e05bce01274ea1768df689 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.4E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS10815 85dac3cd65e05bce01274ea1768df689 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.4E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS10815 85dac3cd65e05bce01274ea1768df689 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.4E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS10815 85dac3cd65e05bce01274ea1768df689 296 Pfam PF03466 LysR substrate binding domain 90 287 5.3E-22 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS10815 85dac3cd65e05bce01274ea1768df689 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.8E-23 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS10815 85dac3cd65e05bce01274ea1768df689 296 SUPERFAMILY SSF53850 91 288 1.01E-24 T 28-03-2018 APY29_RS10815 85dac3cd65e05bce01274ea1768df689 296 Gene3D G3DSA:3.40.190.10 95 175 2.0E-5 T 28-03-2018 APY29_RS10815 85dac3cd65e05bce01274ea1768df689 296 Gene3D G3DSA:1.10.10.10 1 94 2.6E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS10815 85dac3cd65e05bce01274ea1768df689 296 SUPERFAMILY SSF46785 3 85 1.11E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS10815 85dac3cd65e05bce01274ea1768df689 296 Gene3D G3DSA:3.40.190.10 176 258 4.8E-12 T 28-03-2018 APY29_RS23445 9bfaa42e9d5ce6e861a1f9a0cf5f6864 519 Gene3D G3DSA:3.20.20.140 118 237 0.0079 T 28-03-2018 APY29_RS23445 9bfaa42e9d5ce6e861a1f9a0cf5f6864 519 Pfam PF01526 Tn3 transposase DDE domain 110 496 1.3E-143 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 APY29_RS22385 d70578c186a69e51b298c9d1da7d17f8 218 Gene3D G3DSA:3.40.1400.10 1 218 3.8E-56 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 APY29_RS22385 d70578c186a69e51b298c9d1da7d17f8 218 Pfam PF02502 Ribose/Galactose Isomerase 3 144 2.8E-29 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 APY29_RS22385 d70578c186a69e51b298c9d1da7d17f8 218 Pfam PF12408 Ribose-5-phosphate isomerase 163 208 7.9E-21 T 28-03-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal APY29_RS22385 d70578c186a69e51b298c9d1da7d17f8 218 SUPERFAMILY SSF89623 1 161 7.59E-37 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 APY29_RS08615 12fb78465d3f0afbc3769cb9e1f7a967 216 Gene3D G3DSA:3.40.30.10 46 212 1.1E-23 T 28-03-2018 APY29_RS08615 12fb78465d3f0afbc3769cb9e1f7a967 216 Pfam PF02630 SCO1/SenC 52 190 1.0E-21 T 28-03-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS08615 12fb78465d3f0afbc3769cb9e1f7a967 216 SUPERFAMILY SSF52833 47 211 1.06E-40 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS16325 025f6bc14871cec38dd673a71af66c4a 231 Pfam PF08279 HTH domain 7 60 1.3E-13 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 APY29_RS16325 025f6bc14871cec38dd673a71af66c4a 231 SUPERFAMILY SSF46785 3 63 2.72E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS16325 025f6bc14871cec38dd673a71af66c4a 231 Pfam PF13280 WYL domain 138 214 5.4E-8 T 28-03-2018 IPR026881 WYL domain APY29_RS16325 025f6bc14871cec38dd673a71af66c4a 231 Gene3D G3DSA:1.10.10.10 1 64 1.5E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS22495 9cf0771e513dc23ff6c0b1146bde558a 731 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 53 65 1.8E-29 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APY29_RS22495 9cf0771e513dc23ff6c0b1146bde558a 731 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 248 263 1.8E-29 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APY29_RS22495 9cf0771e513dc23ff6c0b1146bde558a 731 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 320 336 1.8E-29 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APY29_RS22495 9cf0771e513dc23ff6c0b1146bde558a 731 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 8 21 1.8E-29 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APY29_RS22495 9cf0771e513dc23ff6c0b1146bde558a 731 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 396 415 1.8E-29 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APY29_RS22495 9cf0771e513dc23ff6c0b1146bde558a 731 SUPERFAMILY SSF109604 351 488 1.36E-15 T 28-03-2018 APY29_RS22495 9cf0771e513dc23ff6c0b1146bde558a 731 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 571 1.8E-190 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APY29_RS22495 9cf0771e513dc23ff6c0b1146bde558a 731 Gene3D G3DSA:1.10.730.10 616 725 5.8E-13 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS22495 9cf0771e513dc23ff6c0b1146bde558a 731 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 4 729 24.205 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APY29_RS22495 9cf0771e513dc23ff6c0b1146bde558a 731 Pfam PF05746 DALR anticodon binding domain 623 716 1.4E-6 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APY29_RS22495 9cf0771e513dc23ff6c0b1146bde558a 731 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 6 729 2.1E-198 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APY29_RS22495 9cf0771e513dc23ff6c0b1146bde558a 731 SMART SM00836 626 729 0.0033 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APY29_RS02705 84c528c596a3226103d90282f8824788 298 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 62 84 - T 28-03-2018 IPR030470 UbiA prenyltransferase conserved site APY29_RS02705 84c528c596a3226103d90282f8824788 298 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 4 292 19.304 T 28-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 APY29_RS02705 84c528c596a3226103d90282f8824788 298 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 6 291 4.0E-88 T 28-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 APY29_RS02705 84c528c596a3226103d90282f8824788 298 Pfam PF01040 UbiA prenyltransferase family 21 266 8.4E-55 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 8 879 23.35 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 Gene3D G3DSA:3.90.740.10 234 422 2.5E-49 T 28-03-2018 APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 Gene3D G3DSA:3.40.50.620 423 591 3.5E-49 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 Pfam PF08264 Anticodon-binding domain of tRNA 718 841 5.5E-13 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 Gene3D G3DSA:3.40.50.620 3 233 1.4E-74 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 9 879 0.0 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 SUPERFAMILY SSF52374 6 230 3.82E-145 T 28-03-2018 APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 SUPERFAMILY SSF52374 434 684 3.82E-145 T 28-03-2018 APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 435 590 8.9E-9 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 19 175 1.9E-27 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 637 675 3.0E-6 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 SUPERFAMILY SSF50677 230 433 8.16E-49 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 SUPERFAMILY SSF47323 683 879 9.35E-33 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 Gene3D G3DSA:1.10.730.10 617 879 1.5E-52 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 189 202 1.1E-45 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 505 523 1.1E-45 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 542 564 1.1E-45 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 157 173 1.1E-45 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 219 238 1.1E-45 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 131 148 1.1E-45 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 575 585 1.1E-45 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 APY29_RS08270 c1416ffe76e407f63e321a2b030cac4c 880 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 225 421 3.4E-69 T 28-03-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 APY29_RS02995 876a3a93dd217960a287a37f2e6a5644 416 Pfam PF12412 Protein of unknown function (DUF3667) 82 125 1.6E-15 T 28-03-2018 IPR022134 Protein of unknown function DUF3667 APY29_RS10445 ad5289fddbf821351ebcab18c8c88a0c 400 Gene3D G3DSA:3.40.50.1820 26 399 4.8E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS10445 ad5289fddbf821351ebcab18c8c88a0c 400 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 17 293 7.3E-94 T 28-03-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 APY29_RS10445 ad5289fddbf821351ebcab18c8c88a0c 400 SUPERFAMILY SSF53474 325 399 4.75E-86 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS10445 ad5289fddbf821351ebcab18c8c88a0c 400 SUPERFAMILY SSF53474 12 293 4.75E-86 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS10445 ad5289fddbf821351ebcab18c8c88a0c 400 Pfam PF00561 alpha/beta hydrolase fold 45 385 5.7E-27 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS10445 ad5289fddbf821351ebcab18c8c88a0c 400 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 2 399 43.867 T 28-03-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 APY29_RS10445 ad5289fddbf821351ebcab18c8c88a0c 400 PIRSF PIRSF000443 1 400 1.4E-138 T 28-03-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 APY29_RS23295 bf1ff3ccabf957edba5a72d2a9040d84 389 SMART SM00359 6 87 6.4E-4 T 28-03-2018 IPR002478 PUA domain GO:0003723 APY29_RS23295 bf1ff3ccabf957edba5a72d2a9040d84 389 SUPERFAMILY SSF88697 12 69 3.48E-11 T 28-03-2018 IPR015947 PUA-like domain APY29_RS23295 bf1ff3ccabf957edba5a72d2a9040d84 389 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 173 299 1.3E-18 T 28-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 APY29_RS23295 bf1ff3ccabf957edba5a72d2a9040d84 389 Gene3D G3DSA:2.30.130.10 9 70 1.2E-18 T 28-03-2018 IPR002478 PUA domain GO:0003723 APY29_RS23295 bf1ff3ccabf957edba5a72d2a9040d84 389 SUPERFAMILY SSF53335 78 384 6.6E-68 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS23295 bf1ff3ccabf957edba5a72d2a9040d84 389 Gene3D G3DSA:3.40.50.150 178 389 8.7E-40 T 28-03-2018 APY29_RS23295 bf1ff3ccabf957edba5a72d2a9040d84 389 Gene3D G3DSA:3.30.750.80 73 177 9.8E-24 T 28-03-2018 APY29_RS09565 dd78e081d34b7df646c5af5b58c57d93 146 Gene3D G3DSA:3.30.70.920 61 146 4.5E-14 T 28-03-2018 APY29_RS09565 dd78e081d34b7df646c5af5b58c57d93 146 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APY29_RS09565 dd78e081d34b7df646c5af5b58c57d93 146 SUPERFAMILY SSF46785 8 59 2.77E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS09565 dd78e081d34b7df646c5af5b58c57d93 146 Gene3D G3DSA:1.10.10.10 1 57 6.7E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS09565 dd78e081d34b7df646c5af5b58c57d93 146 Pfam PF01037 Lrp/AsnC ligand binding domain 72 142 2.9E-13 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APY29_RS09565 dd78e081d34b7df646c5af5b58c57d93 146 SMART SM00344 10 112 4.5E-21 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 APY29_RS09565 dd78e081d34b7df646c5af5b58c57d93 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 1.0E-13 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 APY29_RS09565 dd78e081d34b7df646c5af5b58c57d93 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 1.0E-13 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 APY29_RS09565 dd78e081d34b7df646c5af5b58c57d93 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 1.0E-13 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 APY29_RS09565 dd78e081d34b7df646c5af5b58c57d93 146 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 52 1.2E-14 T 28-03-2018 APY29_RS09565 dd78e081d34b7df646c5af5b58c57d93 146 SUPERFAMILY SSF54909 68 145 3.08E-14 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel APY29_RS04105 93aee7f258d11daac2cec2829e5d4d75 377 Pfam PF00437 Type II/IV secretion system protein 9 269 1.3E-36 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APY29_RS04105 93aee7f258d11daac2cec2829e5d4d75 377 Gene3D G3DSA:3.40.50.300 274 346 1.4E-12 T 28-03-2018 APY29_RS04105 93aee7f258d11daac2cec2829e5d4d75 377 Gene3D G3DSA:3.40.50.300 110 273 2.6E-25 T 28-03-2018 APY29_RS04105 93aee7f258d11daac2cec2829e5d4d75 377 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 6 341 1.4E-133 T 28-03-2018 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 APY29_RS04105 93aee7f258d11daac2cec2829e5d4d75 377 SUPERFAMILY SSF52540 7 337 2.02E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS04105 93aee7f258d11daac2cec2829e5d4d75 377 Gene3D G3DSA:3.30.450.90 1 99 1.8E-17 T 28-03-2018 APY29_RS21960 9a883522192dfc6bf467303882563275 351 PIRSF PIRSF038896 2 336 9.4E-89 T 28-03-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 APY29_RS21960 9a883522192dfc6bf467303882563275 351 Gene3D G3DSA:3.60.15.10 53 339 9.5E-48 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS21960 9a883522192dfc6bf467303882563275 351 Pfam PF12706 Beta-lactamase superfamily domain 93 285 8.0E-44 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS21960 9a883522192dfc6bf467303882563275 351 SUPERFAMILY SSF56281 177 325 1.35E-33 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS21960 9a883522192dfc6bf467303882563275 351 SUPERFAMILY SSF56281 75 150 1.35E-33 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS22730 52c1708d6840b318a182d203cc99466f 107 Gene3D G3DSA:1.20.1250.20 3 107 1.6E-5 T 28-03-2018 APY29_RS22730 52c1708d6840b318a182d203cc99466f 107 SUPERFAMILY SSF103473 11 105 1.96E-7 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS09360 57e668b5522680d1ce91f0b677efda5d 538 SUPERFAMILY SSF53720 30 490 1.06E-72 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APY29_RS09360 57e668b5522680d1ce91f0b677efda5d 538 Pfam PF00171 Aldehyde dehydrogenase family 26 429 1.7E-43 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APY29_RS09360 57e668b5522680d1ce91f0b677efda5d 538 Gene3D G3DSA:3.40.605.10 1 281 5.5E-42 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APY29_RS09360 57e668b5522680d1ce91f0b677efda5d 538 Gene3D G3DSA:3.40.309.10 282 479 8.6E-21 T 28-03-2018 APY29_RS13855 3b4f41c24d10c00ae900b5951dd90ba8 382 SUPERFAMILY SSF51604 95 359 9.69E-72 T 28-03-2018 IPR029065 Enolase C-terminal domain-like APY29_RS13855 3b4f41c24d10c00ae900b5951dd90ba8 382 Gene3D G3DSA:3.20.20.120 98 353 6.6E-66 T 28-03-2018 IPR029065 Enolase C-terminal domain-like APY29_RS13855 3b4f41c24d10c00ae900b5951dd90ba8 382 Gene3D G3DSA:3.30.390.10 1 97 1.1E-30 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS13855 3b4f41c24d10c00ae900b5951dd90ba8 382 Hamap MF_01289 D-galactonate dehydratase [dgoD]. 1 382 70.51 T 28-03-2018 IPR023592 D-galactonate dehydratase GO:0008869|GO:0034194 KEGG: 00052+4.2.1.6 APY29_RS13855 3b4f41c24d10c00ae900b5951dd90ba8 382 Pfam PF13378 Enolase C-terminal domain-like 130 355 1.0E-54 T 28-03-2018 IPR029065 Enolase C-terminal domain-like APY29_RS13855 3b4f41c24d10c00ae900b5951dd90ba8 382 SMART SM00922 125 230 2.3E-17 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APY29_RS13855 3b4f41c24d10c00ae900b5951dd90ba8 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 7 107 1.4E-28 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APY29_RS13855 3b4f41c24d10c00ae900b5951dd90ba8 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 APY29_RS13855 3b4f41c24d10c00ae900b5951dd90ba8 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 APY29_RS13855 3b4f41c24d10c00ae900b5951dd90ba8 382 SUPERFAMILY SSF54826 1 112 1.2E-31 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APY29_RS05205 8cda1a522db4a177f32b3ba845a6b822 147 SUPERFAMILY SSF88697 1 146 3.15E-56 T 28-03-2018 IPR015947 PUA-like domain APY29_RS05205 8cda1a522db4a177f32b3ba845a6b822 147 Gene3D G3DSA:3.10.590.10 1 147 5.8E-56 T 28-03-2018 APY29_RS05205 8cda1a522db4a177f32b3ba845a6b822 147 Pfam PF01878 EVE domain 1 146 6.6E-51 T 28-03-2018 IPR002740 EVE domain APY29_RS06925 df0b8cde7f1e439a5c1856027c314e51 343 PIRSF PIRSF000443 1 342 3.2E-72 T 28-03-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 APY29_RS06925 df0b8cde7f1e439a5c1856027c314e51 343 Pfam PF00561 alpha/beta hydrolase fold 61 324 8.6E-17 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS06925 df0b8cde7f1e439a5c1856027c314e51 343 SUPERFAMILY SSF53474 44 336 3.51E-49 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS06925 df0b8cde7f1e439a5c1856027c314e51 343 Gene3D G3DSA:3.40.50.1820 40 339 5.5E-29 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS22135 d05e727b26e89c43772bd7825e82f58b 156 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 20 153 2.1E-36 T 28-03-2018 IPR012660 Thioesterase, putative APY29_RS22135 d05e727b26e89c43772bd7825e82f58b 156 Gene3D G3DSA:3.10.129.10 3 156 1.0E-17 T 28-03-2018 APY29_RS22135 d05e727b26e89c43772bd7825e82f58b 156 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 17 154 3.8E-50 T 28-03-2018 IPR012660 Thioesterase, putative APY29_RS22135 d05e727b26e89c43772bd7825e82f58b 156 SUPERFAMILY SSF54637 11 153 3.39E-29 T 28-03-2018 IPR029069 HotDog domain APY29_RS10965 85a5aebca44ea5e9ab1765b7778dccda 786 SUPERFAMILY SSF47781 564 636 3.78E-19 T 28-03-2018 IPR010994 RuvA domain 2-like APY29_RS10965 85a5aebca44ea5e9ab1765b7778dccda 786 Pfam PF00575 S1 RNA binding domain 653 724 1.3E-20 T 28-03-2018 IPR003029 S1 domain GO:0003676 APY29_RS10965 85a5aebca44ea5e9ab1765b7778dccda 786 Gene3D G3DSA:1.10.10.650 7 114 1.5E-31 T 28-03-2018 IPR023319 Tex-like protein, HTH domain APY29_RS10965 85a5aebca44ea5e9ab1765b7778dccda 786 Pfam PF09371 Tex-like protein N-terminal domain 14 197 1.6E-64 T 28-03-2018 IPR018974 Tex-like protein, N-terminal APY29_RS10965 85a5aebca44ea5e9ab1765b7778dccda 786 Gene3D G3DSA:1.10.150.310 518 634 1.9E-40 T 28-03-2018 APY29_RS10965 85a5aebca44ea5e9ab1765b7778dccda 786 SMART SM00732 329 428 4.2E-35 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 APY29_RS10965 85a5aebca44ea5e9ab1765b7778dccda 786 Gene3D G3DSA:1.10.3500.10 115 330 4.9E-55 T 28-03-2018 IPR023323 Tex-like domain APY29_RS10965 85a5aebca44ea5e9ab1765b7778dccda 786 SUPERFAMILY SSF158832 6 324 3.4E-111 T 28-03-2018 APY29_RS10965 85a5aebca44ea5e9ab1765b7778dccda 786 Pfam PF12836 Helix-hairpin-helix motif 495 559 1.8E-27 T 28-03-2018 APY29_RS10965 85a5aebca44ea5e9ab1765b7778dccda 786 Gene3D G3DSA:3.30.420.140 331 460 1.1E-52 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 APY29_RS10965 85a5aebca44ea5e9ab1765b7778dccda 786 SUPERFAMILY SSF47781 474 561 1.67E-26 T 28-03-2018 IPR010994 RuvA domain 2-like APY29_RS10965 85a5aebca44ea5e9ab1765b7778dccda 786 Gene3D G3DSA:1.10.150.20 461 517 0.087 T 28-03-2018 APY29_RS10965 85a5aebca44ea5e9ab1765b7778dccda 786 SUPERFAMILY SSF50249 641 730 1.27E-24 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS10965 85a5aebca44ea5e9ab1765b7778dccda 786 SMART SM00316 653 724 3.7E-25 T 28-03-2018 IPR022967 RNA-binding domain, S1 APY29_RS10965 85a5aebca44ea5e9ab1765b7778dccda 786 SUPERFAMILY SSF53098 325 473 5.99E-51 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS10965 85a5aebca44ea5e9ab1765b7778dccda 786 Gene3D G3DSA:2.40.50.140 635 729 7.1E-25 T 28-03-2018 APY29_RS10965 85a5aebca44ea5e9ab1765b7778dccda 786 Pfam PF16921 Tex protein YqgF-like domain 329 455 4.6E-54 T 28-03-2018 IPR032639 Tex protein, YqgF-like domain APY29_RS04095 2748388a8494cc711e72aefce5d77937 329 SUPERFAMILY SSF56529 77 323 1.83E-53 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APY29_RS04095 2748388a8494cc711e72aefce5d77937 329 Gene3D G3DSA:3.90.850.10 27 312 3.6E-50 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APY29_RS04095 2748388a8494cc711e72aefce5d77937 329 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 323 1.4E-35 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APY29_RS21215 c571d9f1a602364c140a5a4bdb26a2e5 139 TIGRFAM TIGR02096 TIGR02096: conserved hypothetical protein 12 138 1.6E-42 T 28-03-2018 IPR011721 Conserved hypothetical protein CHP02096 APY29_RS21215 c571d9f1a602364c140a5a4bdb26a2e5 139 SUPERFAMILY SSF54427 5 133 2.54E-28 T 28-03-2018 IPR032710 NTF2-like domain APY29_RS21215 c571d9f1a602364c140a5a4bdb26a2e5 139 Gene3D G3DSA:3.10.450.50 2 138 4.0E-25 T 28-03-2018 APY29_RS21215 c571d9f1a602364c140a5a4bdb26a2e5 139 Pfam PF12680 SnoaL-like domain 13 123 4.2E-17 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain APY29_RS08560 61a9eca187cba15db639f16d217b0ece 466 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 150 170 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 APY29_RS08560 61a9eca187cba15db639f16d217b0ece 466 Pfam PF00919 Uncharacterized protein family UPF0004 16 108 4.9E-20 T 28-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 APY29_RS08560 61a9eca187cba15db639f16d217b0ece 466 Gene3D G3DSA:2.40.50.140 386 451 5.0E-18 T 28-03-2018 APY29_RS08560 61a9eca187cba15db639f16d217b0ece 466 SMART SM00729 146 371 1.5E-53 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APY29_RS08560 61a9eca187cba15db639f16d217b0ece 466 Pfam PF04055 Radical SAM superfamily 152 329 1.1E-29 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 APY29_RS08560 61a9eca187cba15db639f16d217b0ece 466 SUPERFAMILY SSF102114 125 377 4.45E-52 T 28-03-2018 APY29_RS08560 61a9eca187cba15db639f16d217b0ece 466 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 15 448 60.535 T 28-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 APY29_RS08560 61a9eca187cba15db639f16d217b0ece 466 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 16 446 2.7E-100 T 28-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 APY29_RS08560 61a9eca187cba15db639f16d217b0ece 466 Gene3D G3DSA:3.80.30.20 143 385 7.3E-47 T 28-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe APY29_RS08560 61a9eca187cba15db639f16d217b0ece 466 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 16 446 5.4E-173 T 28-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 APY29_RS21405 2616eee04af0d0a1a2a84fe3e4202f87 612 Gene3D G3DSA:3.40.50.2300 88 244 0.0012 T 28-03-2018 APY29_RS21405 2616eee04af0d0a1a2a84fe3e4202f87 612 SUPERFAMILY SSF143975 4 418 6.02E-134 T 28-03-2018 APY29_RS21405 2616eee04af0d0a1a2a84fe3e4202f87 612 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 606 5.2E-248 T 28-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 APY29_RS21405 2616eee04af0d0a1a2a84fe3e4202f87 612 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 606 44.656 T 28-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 APY29_RS21405 2616eee04af0d0a1a2a84fe3e4202f87 612 SUPERFAMILY SSF52016 419 607 2.51E-60 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APY29_RS21405 2616eee04af0d0a1a2a84fe3e4202f87 612 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 APY29_RS21405 2616eee04af0d0a1a2a84fe3e4202f87 612 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 APY29_RS21405 2616eee04af0d0a1a2a84fe3e4202f87 612 Pfam PF00920 Dehydratase family 34 603 1.2E-216 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 APY29_RS12780 efec2400f0eea69a7e3a1674f4a7cd99 369 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 362 2.8E-98 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APY29_RS12780 efec2400f0eea69a7e3a1674f4a7cd99 369 Gene3D G3DSA:3.40.640.10 14 233 1.0E-37 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS12780 efec2400f0eea69a7e3a1674f4a7cd99 369 Gene3D G3DSA:3.90.1150.10 234 366 2.3E-33 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS12780 efec2400f0eea69a7e3a1674f4a7cd99 369 PIRSF PIRSF000390 1 368 6.8E-102 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APY29_RS12780 efec2400f0eea69a7e3a1674f4a7cd99 369 SUPERFAMILY SSF53383 2 364 2.36E-97 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS16725 99b57e2185c1ce1368be4a7884ee47a0 135 Gene3D G3DSA:3.10.129.10 9 135 5.6E-35 T 28-03-2018 APY29_RS16725 99b57e2185c1ce1368be4a7884ee47a0 135 Pfam PF13279 Thioesterase-like superfamily 15 132 6.9E-22 T 28-03-2018 APY29_RS16725 99b57e2185c1ce1368be4a7884ee47a0 135 SUPERFAMILY SSF54637 9 133 8.43E-36 T 28-03-2018 IPR029069 HotDog domain APY29_RS10495 f398c44dc4354a4cb82c426825f1d061 382 Gene3D G3DSA:3.90.1150.10 1 48 0.059 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS10495 f398c44dc4354a4cb82c426825f1d061 382 Gene3D G3DSA:3.90.1150.10 293 382 5.1E-16 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS10495 f398c44dc4354a4cb82c426825f1d061 382 Gene3D G3DSA:3.40.640.10 49 292 6.8E-61 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS10495 f398c44dc4354a4cb82c426825f1d061 382 Pfam PF00155 Aminotransferase class I and II 28 379 2.0E-58 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APY29_RS10495 f398c44dc4354a4cb82c426825f1d061 382 SUPERFAMILY SSF53383 2 381 2.66E-101 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS03430 a6097fbad60da23c29178d140022fe29 427 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 151 164 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APY29_RS03430 a6097fbad60da23c29178d140022fe29 427 Gene3D G3DSA:3.40.50.300 124 295 3.5E-25 T 28-03-2018 APY29_RS03430 a6097fbad60da23c29178d140022fe29 427 SMART SM00448 4 114 1.7E-16 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS03430 a6097fbad60da23c29178d140022fe29 427 SUPERFAMILY SSF52172 1 172 2.13E-25 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS03430 a6097fbad60da23c29178d140022fe29 427 Gene3D G3DSA:1.10.10.60 389 422 9.8E-11 T 28-03-2018 APY29_RS03430 a6097fbad60da23c29178d140022fe29 427 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 390 407 2.5E-6 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS03430 a6097fbad60da23c29178d140022fe29 427 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 407 427 2.5E-6 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS03430 a6097fbad60da23c29178d140022fe29 427 SMART SM00382 147 287 1.3E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS03430 a6097fbad60da23c29178d140022fe29 427 Pfam PF00072 Response regulator receiver domain 8 112 1.2E-14 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS03430 a6097fbad60da23c29178d140022fe29 427 Gene3D G3DSA:3.40.50.2300 1 123 5.4E-18 T 28-03-2018 APY29_RS03430 a6097fbad60da23c29178d140022fe29 427 SUPERFAMILY SSF46689 374 422 5.14E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS03430 a6097fbad60da23c29178d140022fe29 427 SUPERFAMILY SSF52540 126 366 4.94E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS03430 a6097fbad60da23c29178d140022fe29 427 Pfam PF00158 Sigma-54 interaction domain 127 291 2.7E-60 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APY29_RS03430 a6097fbad60da23c29178d140022fe29 427 Gene3D G3DSA:1.10.8.60 296 388 1.0E-13 T 28-03-2018 APY29_RS03430 a6097fbad60da23c29178d140022fe29 427 Pfam PF02954 Bacterial regulatory protein, Fis family 384 421 2.4E-12 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS19250 3c0b0956513a1dd8362bd477722c6826 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 1.4E-181 T 28-03-2018 APY29_RS19250 3c0b0956513a1dd8362bd477722c6826 417 Gene3D G3DSA:3.40.640.10 37 275 1.6E-52 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS19250 3c0b0956513a1dd8362bd477722c6826 417 Gene3D G3DSA:3.90.1150.10 276 416 9.6E-59 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS19250 3c0b0956513a1dd8362bd477722c6826 417 PIRSF PIRSF000412 2 417 2.4E-168 T 28-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 APY29_RS19250 3c0b0956513a1dd8362bd477722c6826 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 52.577 T 28-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 APY29_RS19250 3c0b0956513a1dd8362bd477722c6826 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 28-03-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 APY29_RS19250 3c0b0956513a1dd8362bd477722c6826 417 SUPERFAMILY SSF53383 7 416 1.14E-179 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS04780 988b791a120f02d629dd5fb781f2e71f 420 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 20 402 1.1E-126 T 28-03-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA APY29_RS04780 988b791a120f02d629dd5fb781f2e71f 420 SMART SM01154 40 409 7.4E-148 T 28-03-2018 IPR012548 Protein of unknown function DUF1704 APY29_RS04780 988b791a120f02d629dd5fb781f2e71f 420 Pfam PF08014 Domain of unknown function (DUF1704) 48 406 4.8E-120 T 28-03-2018 IPR012548 Protein of unknown function DUF1704 APY29_RS11750 503db1d669e7484231f258f102040520 52 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 8 52 5.6E-12 T 28-03-2018 IPR025161 Putative transposase IS4/IS5 family APY29_RS05285 bfead3198d7040c2acf6676ad66ee1b5 203 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 35.419 T 28-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 APY29_RS05285 bfead3198d7040c2acf6676ad66ee1b5 203 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 28-03-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APY29_RS05285 bfead3198d7040c2acf6676ad66ee1b5 203 Gene3D G3DSA:3.40.50.300 1 199 6.2E-51 T 28-03-2018 APY29_RS05285 bfead3198d7040c2acf6676ad66ee1b5 203 SMART SM00072 2 184 1.5E-57 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APY29_RS05285 bfead3198d7040c2acf6676ad66ee1b5 203 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 5.2E-70 T 28-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 APY29_RS05285 bfead3198d7040c2acf6676ad66ee1b5 203 SUPERFAMILY SSF52540 2 187 2.97E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS05285 bfead3198d7040c2acf6676ad66ee1b5 203 Pfam PF00625 Guanylate kinase 4 180 1.9E-46 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APY29_RS19280 e86e8cdc3ff553eee1b5b551322400f7 466 Gene3D G3DSA:3.40.640.10 120 368 3.4E-53 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS19280 e86e8cdc3ff553eee1b5b551322400f7 466 Pfam PF00155 Aminotransferase class I and II 131 459 7.4E-37 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APY29_RS19280 e86e8cdc3ff553eee1b5b551322400f7 466 SMART SM00345 7 66 5.8E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS19280 e86e8cdc3ff553eee1b5b551322400f7 466 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 7.5E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS19280 e86e8cdc3ff553eee1b5b551322400f7 466 Gene3D G3DSA:3.90.1150.10 369 466 1.8E-20 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS19280 e86e8cdc3ff553eee1b5b551322400f7 466 Gene3D G3DSA:1.10.10.10 2 68 1.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS19280 e86e8cdc3ff553eee1b5b551322400f7 466 SUPERFAMILY SSF53383 93 464 1.34E-92 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS19280 e86e8cdc3ff553eee1b5b551322400f7 466 SUPERFAMILY SSF46785 3 75 6.51E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS20115 e3ad6fcc043186a58c440ac57fb6ec1f 528 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 380 479 3.0E-8 T 28-03-2018 APY29_RS20115 e3ad6fcc043186a58c440ac57fb6ec1f 528 Gene3D G3DSA:3.40.50.720 103 515 1.2E-53 T 28-03-2018 APY29_RS20115 e3ad6fcc043186a58c440ac57fb6ec1f 528 SUPERFAMILY SSF51735 372 514 6.62E-28 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS20115 e3ad6fcc043186a58c440ac57fb6ec1f 528 SUPERFAMILY SSF51735 170 269 6.62E-28 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS20115 e3ad6fcc043186a58c440ac57fb6ec1f 528 Pfam PF00106 short chain dehydrogenase 175 266 5.5E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS08260 f4b7a4915fd513dc3a7627a812ee2dfc 285 Pfam PF14561 Tetratricopeptide repeat 199 285 9.7E-17 T 28-03-2018 APY29_RS08260 f4b7a4915fd513dc3a7627a812ee2dfc 285 Pfam PF14559 Tetratricopeptide repeat 135 192 6.5E-7 T 28-03-2018 APY29_RS08260 f4b7a4915fd513dc3a7627a812ee2dfc 285 Gene3D G3DSA:1.25.40.10 211 285 0.0061 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS08260 f4b7a4915fd513dc3a7627a812ee2dfc 285 Pfam PF00085 Thioredoxin 8 111 3.5E-27 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 APY29_RS08260 f4b7a4915fd513dc3a7627a812ee2dfc 285 SUPERFAMILY SSF52833 6 111 2.21E-34 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS08260 f4b7a4915fd513dc3a7627a812ee2dfc 285 PRINTS PR00421 Thioredoxin family signature 36 45 1.7E-6 T 28-03-2018 APY29_RS08260 f4b7a4915fd513dc3a7627a812ee2dfc 285 PRINTS PR00421 Thioredoxin family signature 28 36 1.7E-6 T 28-03-2018 APY29_RS08260 f4b7a4915fd513dc3a7627a812ee2dfc 285 PRINTS PR00421 Thioredoxin family signature 76 87 1.7E-6 T 28-03-2018 APY29_RS08260 f4b7a4915fd513dc3a7627a812ee2dfc 285 TIGRFAM TIGR01068 thioredoxin: thioredoxin 13 111 6.0E-31 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APY29_RS08260 f4b7a4915fd513dc3a7627a812ee2dfc 285 Gene3D G3DSA:3.40.30.10 1 210 2.0E-40 T 28-03-2018 APY29_RS08260 f4b7a4915fd513dc3a7627a812ee2dfc 285 ProSitePatterns PS00194 Thioredoxin family active site. 29 47 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 APY29_RS13450 1010c492c2ef8ac8303fa762218bdf44 188 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 37.724 T 28-03-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.53+1.13.11.54|MetaCyc: PWY-4361|MetaCyc: PWY-5389 APY29_RS13450 1010c492c2ef8ac8303fa762218bdf44 188 SUPERFAMILY SSF51182 3 179 1.95E-37 T 28-03-2018 IPR011051 RmlC-like cupin domain APY29_RS13450 1010c492c2ef8ac8303fa762218bdf44 188 Pfam PF03079 ARD/ARD' family 6 164 8.9E-32 T 28-03-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 APY29_RS13450 1010c492c2ef8ac8303fa762218bdf44 188 Gene3D G3DSA:2.60.120.10 2 157 1.1E-38 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS15400 c0a7ff38c95fc929f025a65cbfc8f259 458 Pfam PF05598 Transposase domain (DUF772) 59 133 1.2E-17 T 28-03-2018 IPR008490 Transposase InsH, N-terminal APY29_RS15400 c0a7ff38c95fc929f025a65cbfc8f259 458 Pfam PF01609 Transposase DDE domain 283 421 5.5E-11 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 APY29_RS14935 c0a7ff38c95fc929f025a65cbfc8f259 458 Pfam PF05598 Transposase domain (DUF772) 59 133 1.2E-17 T 28-03-2018 IPR008490 Transposase InsH, N-terminal APY29_RS14935 c0a7ff38c95fc929f025a65cbfc8f259 458 Pfam PF01609 Transposase DDE domain 283 421 5.5E-11 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 APY29_RS23375 c0a7ff38c95fc929f025a65cbfc8f259 458 Pfam PF05598 Transposase domain (DUF772) 59 133 1.2E-17 T 28-03-2018 IPR008490 Transposase InsH, N-terminal APY29_RS23375 c0a7ff38c95fc929f025a65cbfc8f259 458 Pfam PF01609 Transposase DDE domain 283 421 5.5E-11 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 APY29_RS11265 c0a7ff38c95fc929f025a65cbfc8f259 458 Pfam PF05598 Transposase domain (DUF772) 59 133 1.2E-17 T 28-03-2018 IPR008490 Transposase InsH, N-terminal APY29_RS11265 c0a7ff38c95fc929f025a65cbfc8f259 458 Pfam PF01609 Transposase DDE domain 283 421 5.5E-11 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 APY29_RS16255 c0a7ff38c95fc929f025a65cbfc8f259 458 Pfam PF05598 Transposase domain (DUF772) 59 133 1.2E-17 T 28-03-2018 IPR008490 Transposase InsH, N-terminal APY29_RS16255 c0a7ff38c95fc929f025a65cbfc8f259 458 Pfam PF01609 Transposase DDE domain 283 421 5.5E-11 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 APY29_RS05790 c0a7ff38c95fc929f025a65cbfc8f259 458 Pfam PF05598 Transposase domain (DUF772) 59 133 1.2E-17 T 28-03-2018 IPR008490 Transposase InsH, N-terminal APY29_RS05790 c0a7ff38c95fc929f025a65cbfc8f259 458 Pfam PF01609 Transposase DDE domain 283 421 5.5E-11 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 APY29_RS03180 e8c6985999335ab988cf8f119ea14c74 625 Gene3D G3DSA:3.30.565.10 3 234 3.1E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS03180 e8c6985999335ab988cf8f119ea14c74 625 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 22 109 2.5E-7 T 28-03-2018 APY29_RS03180 e8c6985999335ab988cf8f119ea14c74 625 SUPERFAMILY SSF55874 17 120 8.51E-12 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS02665 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 165 183 4.3E-124 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02665 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 93 117 4.3E-124 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02665 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 194 213 4.3E-124 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02665 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 19 44 4.3E-124 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02665 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 136 148 4.3E-124 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02665 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 66 89 4.3E-124 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02665 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 315 336 4.3E-124 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02665 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 428 449 4.3E-124 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02665 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 350 368 4.3E-124 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02665 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 245 266 4.3E-124 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02665 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 378 397 4.3E-124 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02665 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 291 306 4.3E-124 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02665 8a225dbf094fb90045f0d9abe8195c51 534 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 20 521 5.3E-208 T 28-03-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 APY29_RS02665 8a225dbf094fb90045f0d9abe8195c51 534 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 28 469 3.9E-149 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02665 8a225dbf094fb90045f0d9abe8195c51 534 Gene3D G3DSA:1.20.210.10 15 525 8.7E-219 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02665 8a225dbf094fb90045f0d9abe8195c51 534 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 247 301 - T 28-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02665 8a225dbf094fb90045f0d9abe8195c51 534 SUPERFAMILY SSF81442 17 522 7.59E-189 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS03005 b4e6839fbd6b770fd96b80dd4a397fba 633 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 18 578 2.4E-163 T 28-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 APY29_RS03005 b4e6839fbd6b770fd96b80dd4a397fba 633 SUPERFAMILY SSF52096 477 537 1.99E-40 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS03005 b4e6839fbd6b770fd96b80dd4a397fba 633 SUPERFAMILY SSF52096 328 448 1.99E-40 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS03005 b4e6839fbd6b770fd96b80dd4a397fba 633 Pfam PF01343 Peptidase family S49 400 551 2.1E-47 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 APY29_RS03005 b4e6839fbd6b770fd96b80dd4a397fba 633 Pfam PF01343 Peptidase family S49 142 294 6.7E-22 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 APY29_RS03005 b4e6839fbd6b770fd96b80dd4a397fba 633 Gene3D G3DSA:3.40.1750.10 191 293 4.5E-15 T 28-03-2018 APY29_RS03005 b4e6839fbd6b770fd96b80dd4a397fba 633 SUPERFAMILY SSF52096 214 290 1.99E-14 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS03005 b4e6839fbd6b770fd96b80dd4a397fba 633 SUPERFAMILY SSF52096 40 182 1.99E-14 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS03005 b4e6839fbd6b770fd96b80dd4a397fba 633 Gene3D G3DSA:3.90.226.10 327 612 2.1E-46 T 28-03-2018 APY29_RS03005 b4e6839fbd6b770fd96b80dd4a397fba 633 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 359 547 3.7E-49 T 28-03-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 APY29_RS03005 b4e6839fbd6b770fd96b80dd4a397fba 633 PIRSF PIRSF001217 10 633 5.4E-208 T 28-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 ProSitePatterns PS00447 DNA polymerase family A signature. 760 779 - T 28-03-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 Gene3D G3DSA:1.20.1060.10 549 663 2.8E-34 T 28-03-2018 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 SMART SM00474 336 523 2.8E-31 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 Gene3D G3DSA:1.10.150.20 180 257 8.4E-25 T 28-03-2018 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 SMART SM00475 2 256 7.7E-109 T 28-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 Pfam PF00476 DNA polymerase family A 557 931 4.8E-147 T 28-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 Gene3D G3DSA:3.40.50.1010 2 179 1.1E-62 T 28-03-2018 IPR029060 PIN domain-like APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 SUPERFAMILY SSF56672 528 934 1.22E-153 T 28-03-2018 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 TIGRFAM TIGR00593 pola: DNA polymerase I 4 934 2.1E-268 T 28-03-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 SMART SM00279 168 203 1.4E-14 T 28-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 Gene3D G3DSA:3.30.70.370 664 773 1.5E-33 T 28-03-2018 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 166 260 1.3E-27 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 SUPERFAMILY SSF88723 1 165 8.69E-51 T 28-03-2018 IPR029060 PIN domain-like APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 SUPERFAMILY SSF53098 339 523 2.85E-51 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 Gene3D G3DSA:3.30.70.370 774 934 1.4E-44 T 28-03-2018 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 3 165 2.0E-47 T 28-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 Pfam PF01612 3'-5' exonuclease 337 522 1.2E-35 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 706 729 3.0E-79 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 661 683 3.0E-79 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 819 830 3.0E-79 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 881 894 3.0E-79 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 851 867 3.0E-79 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 797 808 3.0E-79 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 684 699 3.0E-79 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 736 749 3.0E-79 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 760 785 3.0E-79 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 Gene3D G3DSA:3.30.420.10 346 548 7.3E-47 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 SMART SM00482 692 898 5.7E-107 T 28-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS01560 b0a0005651860deb6eff02d36e1f3314 934 SUPERFAMILY SSF47807 166 280 1.64E-31 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APY29_RS19090 f0c66983cb1d983540a7a42d56f33baa 255 Pfam PF05742 Transport and Golgi organisation 2 1 237 3.7E-53 T 28-03-2018 IPR008551 Transport and Golgi organisation protein 2 APY29_RS06545 103bea3ccbf5dfdb88a1f2420394af60 814 Pfam PF00905 Penicillin binding protein transpeptidase domain 441 682 1.7E-16 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APY29_RS06545 103bea3ccbf5dfdb88a1f2420394af60 814 PIRSF PIRSF002799 3 795 7.6E-282 T 28-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 APY29_RS06545 103bea3ccbf5dfdb88a1f2420394af60 814 SUPERFAMILY SSF56601 380 769 7.51E-99 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like APY29_RS06545 103bea3ccbf5dfdb88a1f2420394af60 814 SUPERFAMILY SSF56601 328 350 7.51E-99 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like APY29_RS06545 103bea3ccbf5dfdb88a1f2420394af60 814 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 31 761 5.6E-286 T 28-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 APY29_RS06545 103bea3ccbf5dfdb88a1f2420394af60 814 Pfam PF00912 Transglycosylase 167 346 2.3E-53 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 APY29_RS06545 103bea3ccbf5dfdb88a1f2420394af60 814 Gene3D G3DSA:1.10.3810.10 161 363 6.5E-58 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 APY29_RS06545 103bea3ccbf5dfdb88a1f2420394af60 814 SUPERFAMILY SSF53955 167 368 2.56E-57 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS06545 103bea3ccbf5dfdb88a1f2420394af60 814 Gene3D G3DSA:3.30.2060.10 75 160 3.8E-21 T 28-03-2018 APY29_RS06545 103bea3ccbf5dfdb88a1f2420394af60 814 Gene3D G3DSA:3.40.710.10 375 740 4.1E-83 T 28-03-2018 APY29_RS06545 103bea3ccbf5dfdb88a1f2420394af60 814 Pfam PF14814 Bifunctional transglycosylase second domain 76 160 8.2E-20 T 28-03-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 APY29_RS19460 68e5f7b3c0feca85e8d1b2c16e53d2bf 362 Pfam PF05134 Type II secretion system (T2SS), protein L 39 158 3.4E-15 T 28-03-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain APY29_RS19460 68e5f7b3c0feca85e8d1b2c16e53d2bf 362 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 360 9.5E-75 T 28-03-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 APY29_RS19460 68e5f7b3c0feca85e8d1b2c16e53d2bf 362 SUPERFAMILY SSF53067 1 134 4.66E-16 T 28-03-2018 APY29_RS08325 3eabcee0c60eaf18d0f26f246dc07c12 499 Pfam PF10150 Ribonuclease E/G family 132 403 5.3E-103 T 28-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 APY29_RS08325 3eabcee0c60eaf18d0f26f246dc07c12 499 SUPERFAMILY SSF50249 39 136 7.25E-16 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS08325 3eabcee0c60eaf18d0f26f246dc07c12 499 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 436 5.2E-154 T 28-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 APY29_RS08325 3eabcee0c60eaf18d0f26f246dc07c12 499 Gene3D G3DSA:2.40.50.140 33 135 4.2E-28 T 28-03-2018 APY29_RS08325 3eabcee0c60eaf18d0f26f246dc07c12 499 SMART SM00316 37 130 4.5E-5 T 28-03-2018 IPR022967 RNA-binding domain, S1 APY29_RS03735 61361be684b4fb1599d2581cd6c64804 186 Pfam PF07209 Protein of unknown function (DUF1415) 11 178 4.2E-71 T 28-03-2018 IPR009858 Protein of unknown function DUF1415 APY29_RS22360 e1b6d88dcc3c51b57d1c1c39e73110ff 160 Pfam PF01037 Lrp/AsnC ligand binding domain 73 147 3.9E-23 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APY29_RS22360 e1b6d88dcc3c51b57d1c1c39e73110ff 160 SUPERFAMILY SSF54909 67 156 4.96E-22 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel APY29_RS22360 e1b6d88dcc3c51b57d1c1c39e73110ff 160 SUPERFAMILY SSF46785 6 66 2.2E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS22360 e1b6d88dcc3c51b57d1c1c39e73110ff 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 2.7E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 APY29_RS22360 e1b6d88dcc3c51b57d1c1c39e73110ff 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 2.7E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 APY29_RS22360 e1b6d88dcc3c51b57d1c1c39e73110ff 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 2.7E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 APY29_RS22360 e1b6d88dcc3c51b57d1c1c39e73110ff 160 Gene3D G3DSA:1.10.10.10 1 58 3.6E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS22360 e1b6d88dcc3c51b57d1c1c39e73110ff 160 Pfam PF13404 AsnC-type helix-turn-helix domain 7 48 3.1E-15 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 APY29_RS22360 e1b6d88dcc3c51b57d1c1c39e73110ff 160 Gene3D G3DSA:3.30.70.920 60 152 7.6E-31 T 28-03-2018 APY29_RS22360 e1b6d88dcc3c51b57d1c1c39e73110ff 160 SMART SM00344 7 116 1.6E-31 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 APY29_RS22360 e1b6d88dcc3c51b57d1c1c39e73110ff 160 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APY29_RS06200 47e6cc9392818795b32b125d3ed1781c 438 Gene3D G3DSA:3.40.50.1820 3 371 9.9E-12 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS06200 47e6cc9392818795b32b125d3ed1781c 438 SUPERFAMILY SSF53474 5 182 8.03E-15 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS23505 2b50e176f3682a7a14be2feb32b552eb 415 Gene3D G3DSA:1.10.10.60 299 349 0.0017 T 28-03-2018 APY29_RS23505 2b50e176f3682a7a14be2feb32b552eb 415 Pfam PF03090 Replicase family 45 173 1.5E-48 T 28-03-2018 IPR004322 Plasmid replicase, bacterial APY29_RS23505 2b50e176f3682a7a14be2feb32b552eb 415 Pfam PF08708 Primase C terminal 1 (PriCT-1) 189 264 1.6E-20 T 28-03-2018 IPR014820 Primase, C-terminal 1 APY29_RS15270 190490b267e005fdecd5e64f986c14ff 738 Gene3D G3DSA:3.40.50.300 487 735 6.7E-53 T 28-03-2018 APY29_RS15270 190490b267e005fdecd5e64f986c14ff 738 SMART SM00382 527 712 3.4E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS15270 190490b267e005fdecd5e64f986c14ff 738 Gene3D G3DSA:1.20.1560.10 165 485 2.2E-36 T 28-03-2018 APY29_RS15270 190490b267e005fdecd5e64f986c14ff 738 SUPERFAMILY SSF90123 173 485 4.97E-51 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS15270 190490b267e005fdecd5e64f986c14ff 738 SUPERFAMILY SSF52540 497 712 3.74E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS15270 190490b267e005fdecd5e64f986c14ff 738 Pfam PF03412 Peptidase C39 family 31 158 2.3E-34 T 28-03-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 APY29_RS15270 190490b267e005fdecd5e64f986c14ff 738 Pfam PF00005 ABC transporter 521 666 4.3E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS15270 190490b267e005fdecd5e64f986c14ff 738 Gene3D G3DSA:3.90.70.10 32 164 4.9E-38 T 28-03-2018 APY29_RS15270 190490b267e005fdecd5e64f986c14ff 738 Pfam PF00664 ABC transporter transmembrane region 189 454 1.2E-31 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS15270 190490b267e005fdecd5e64f986c14ff 738 ProSitePatterns PS00211 ABC transporters family signature. 639 653 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS00350 e26e95435d63946beb4a2c886b4eb859 318 Gene3D G3DSA:3.40.50.720 2 186 9.1E-24 T 28-03-2018 APY29_RS00350 e26e95435d63946beb4a2c886b4eb859 318 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 239 9.5E-38 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 APY29_RS00350 e26e95435d63946beb4a2c886b4eb859 318 Gene3D G3DSA:3.90.25.10 187 313 5.2E-24 T 28-03-2018 APY29_RS00350 e26e95435d63946beb4a2c886b4eb859 318 SUPERFAMILY SSF51735 1 306 4.3E-63 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS05805 dd09afdb13022eb47628a2790013ca81 133 Gene3D G3DSA:1.10.10.10 6 133 1.6E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS05805 dd09afdb13022eb47628a2790013ca81 133 SUPERFAMILY SSF46785 54 120 2.08E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS01995 fd331828d9a38f5e6ac684bcadad5081 844 Pfam PF00258 Flavodoxin 387 510 5.0E-24 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APY29_RS01995 fd331828d9a38f5e6ac684bcadad5081 844 SUPERFAMILY SSF52218 383 531 2.05E-38 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS01995 fd331828d9a38f5e6ac684bcadad5081 844 Gene3D G3DSA:2.40.30.10 530 696 2.1E-15 T 28-03-2018 APY29_RS01995 fd331828d9a38f5e6ac684bcadad5081 844 PRINTS PR00369 Flavodoxin signature 434 445 4.9E-9 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APY29_RS01995 fd331828d9a38f5e6ac684bcadad5081 844 PRINTS PR00369 Flavodoxin signature 489 508 4.9E-9 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APY29_RS01995 fd331828d9a38f5e6ac684bcadad5081 844 PRINTS PR00369 Flavodoxin signature 386 399 4.9E-9 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APY29_RS01995 fd331828d9a38f5e6ac684bcadad5081 844 PRINTS PR00369 Flavodoxin signature 465 475 4.9E-9 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APY29_RS01995 fd331828d9a38f5e6ac684bcadad5081 844 SUPERFAMILY SSF63380 534 704 2.43E-18 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APY29_RS01995 fd331828d9a38f5e6ac684bcadad5081 844 SUPERFAMILY SSF52343 707 844 4.71E-33 T 28-03-2018 APY29_RS01995 fd331828d9a38f5e6ac684bcadad5081 844 Gene3D G3DSA:3.40.50.80 709 843 3.7E-22 T 28-03-2018 APY29_RS01995 fd331828d9a38f5e6ac684bcadad5081 844 Pfam PF03929 PepSY-associated TM region 7 359 1.5E-61 T 28-03-2018 IPR005625 PepSY-associated TM protein APY29_RS01995 fd331828d9a38f5e6ac684bcadad5081 844 Gene3D G3DSA:3.40.50.360 359 529 1.7E-28 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS01995 fd331828d9a38f5e6ac684bcadad5081 844 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 803 811 3.6E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APY29_RS01995 fd331828d9a38f5e6ac684bcadad5081 844 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 780 796 3.6E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APY29_RS01995 fd331828d9a38f5e6ac684bcadad5081 844 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 712 731 3.6E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APY29_RS01995 fd331828d9a38f5e6ac684bcadad5081 844 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 649 656 3.6E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APY29_RS01995 fd331828d9a38f5e6ac684bcadad5081 844 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 749 760 3.6E-7 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APY29_RS01995 fd331828d9a38f5e6ac684bcadad5081 844 Pfam PF00175 Oxidoreductase NAD-binding domain 713 817 7.3E-8 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APY29_RS13040 ed8cc7eb40b1f13a2665199ac256c9bb 363 Gene3D G3DSA:3.40.50.300 1 329 6.0E-37 T 28-03-2018 APY29_RS13040 ed8cc7eb40b1f13a2665199ac256c9bb 363 Pfam PF13614 AAA domain 3 195 1.7E-29 T 28-03-2018 IPR025669 AAA domain APY29_RS13040 ed8cc7eb40b1f13a2665199ac256c9bb 363 SUPERFAMILY SSF52540 1 201 5.33E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS04630 d5e95af3843463eecc47aa6826b2e4c0 140 Pfam PF03960 ArsC family 7 112 2.5E-14 T 28-03-2018 IPR006660 Arsenate reductase-like APY29_RS04630 d5e95af3843463eecc47aa6826b2e4c0 140 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 115 1.4E-41 T 28-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 APY29_RS04630 d5e95af3843463eecc47aa6826b2e4c0 140 Gene3D G3DSA:3.40.30.10 1 139 2.5E-36 T 28-03-2018 APY29_RS04630 d5e95af3843463eecc47aa6826b2e4c0 140 SUPERFAMILY SSF52833 4 133 2.41E-36 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS00270 c3674995ecf6d8bdf8be24491f3d03e7 289 Pfam PF05368 NmrA-like family 3 222 6.8E-31 T 28-03-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 APY29_RS00270 c3674995ecf6d8bdf8be24491f3d03e7 289 SUPERFAMILY SSF51735 3 260 1.69E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS00270 c3674995ecf6d8bdf8be24491f3d03e7 289 Gene3D G3DSA:3.40.50.720 1 288 2.6E-24 T 28-03-2018 APY29_RS15735 b38b5dde133114eab0e3b80057e88c23 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 315 3.8E-154 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 APY29_RS15735 b38b5dde133114eab0e3b80057e88c23 319 SUPERFAMILY SSF52096 5 316 1.23E-104 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS15735 b38b5dde133114eab0e3b80057e88c23 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 51.207 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 APY29_RS15735 b38b5dde133114eab0e3b80057e88c23 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 4.7E-49 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 APY29_RS15735 b38b5dde133114eab0e3b80057e88c23 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 4.7E-49 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 APY29_RS15735 b38b5dde133114eab0e3b80057e88c23 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 4.7E-49 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 APY29_RS15735 b38b5dde133114eab0e3b80057e88c23 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 4.7E-49 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 APY29_RS15735 b38b5dde133114eab0e3b80057e88c23 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 4.7E-49 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 APY29_RS15735 b38b5dde133114eab0e3b80057e88c23 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 4.7E-49 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 APY29_RS15735 b38b5dde133114eab0e3b80057e88c23 319 Gene3D G3DSA:3.90.226.10 29 310 1.9E-69 T 28-03-2018 APY29_RS15735 b38b5dde133114eab0e3b80057e88c23 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 8.4E-63 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 APY29_RS21185 2b5fe497440d83d4a95bb4ea6355e497 401 Gene3D G3DSA:3.40.640.10 50 286 3.2E-46 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS21185 2b5fe497440d83d4a95bb4ea6355e497 401 Pfam PF00155 Aminotransferase class I and II 45 385 5.1E-51 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APY29_RS21185 2b5fe497440d83d4a95bb4ea6355e497 401 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 23 385 1.0E-145 T 28-03-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 APY29_RS21185 2b5fe497440d83d4a95bb4ea6355e497 401 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 6 389 44.702 T 28-03-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 APY29_RS21185 2b5fe497440d83d4a95bb4ea6355e497 401 SUPERFAMILY SSF53383 8 389 9.08E-95 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS21185 2b5fe497440d83d4a95bb4ea6355e497 401 Gene3D G3DSA:3.90.1150.10 287 396 1.4E-27 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS07910 b4cb1cbf0eae1996d69afe3085acf5c3 404 Pfam PF00529 HlyD membrane-fusion protein of T1SS 296 363 2.2E-6 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 APY29_RS07910 b4cb1cbf0eae1996d69afe3085acf5c3 404 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 377 3.3E-83 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 APY29_RS07910 b4cb1cbf0eae1996d69afe3085acf5c3 404 Gene3D G3DSA:1.20.1600.10 68 317 3.8E-30 T 28-03-2018 APY29_RS07910 b4cb1cbf0eae1996d69afe3085acf5c3 404 SUPERFAMILY SSF111369 52 302 3.4E-87 T 28-03-2018 APY29_RS07910 b4cb1cbf0eae1996d69afe3085acf5c3 404 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 295 1.1E-11 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APY29_RS08360 40085dff49e5f26c3e509a5b39ab34ef 378 Pfam PF14521 Lysine-specific metallo-endopeptidase 239 372 1.1E-43 T 28-03-2018 IPR029463 Lysine-specific metallo-endopeptidase GO:0004222 APY29_RS08360 40085dff49e5f26c3e509a5b39ab34ef 378 Gene3D G3DSA:3.40.390.10 208 378 2.1E-40 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APY29_RS08360 40085dff49e5f26c3e509a5b39ab34ef 378 SMART SM01351 236 372 1.7E-69 T 28-03-2018 IPR029463 Lysine-specific metallo-endopeptidase GO:0004222 APY29_RS08360 40085dff49e5f26c3e509a5b39ab34ef 378 SUPERFAMILY SSF55486 209 377 2.23E-51 T 28-03-2018 APY29_RS06930 cbd1a3d60b20d12200bf95208ab6d26c 405 Gene3D G3DSA:3.40.640.10 10 255 3.6E-56 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS06930 cbd1a3d60b20d12200bf95208ab6d26c 405 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 15 388 5.3E-135 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 APY29_RS06930 cbd1a3d60b20d12200bf95208ab6d26c 405 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 13 389 7.3E-179 T 28-03-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 APY29_RS06930 cbd1a3d60b20d12200bf95208ab6d26c 405 PIRSF PIRSF001434 4 392 5.6E-134 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 APY29_RS06930 cbd1a3d60b20d12200bf95208ab6d26c 405 Gene3D G3DSA:3.90.1150.10 256 394 3.0E-51 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS06930 cbd1a3d60b20d12200bf95208ab6d26c 405 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 APY29_RS06930 cbd1a3d60b20d12200bf95208ab6d26c 405 SUPERFAMILY SSF53383 19 389 1.9E-117 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS00385 5df377f3b5fb28976b5aace823fb1b2b 248 Gene3D G3DSA:3.40.50.150 48 122 2.3E-9 T 28-03-2018 APY29_RS00385 5df377f3b5fb28976b5aace823fb1b2b 248 Gene3D G3DSA:3.40.50.150 123 212 7.4E-8 T 28-03-2018 APY29_RS00385 5df377f3b5fb28976b5aace823fb1b2b 248 Pfam PF13847 Methyltransferase domain 70 193 1.8E-9 T 28-03-2018 IPR025714 Methyltransferase domain APY29_RS00385 5df377f3b5fb28976b5aace823fb1b2b 248 SUPERFAMILY SSF53335 51 202 4.73E-18 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS10320 d8c54bda9e670b63aee85c03a36ee28b 416 Gene3D G3DSA:1.20.1250.20 223 416 1.8E-13 T 28-03-2018 APY29_RS10320 d8c54bda9e670b63aee85c03a36ee28b 416 Gene3D G3DSA:1.20.1250.20 9 209 3.2E-20 T 28-03-2018 APY29_RS10320 d8c54bda9e670b63aee85c03a36ee28b 416 SUPERFAMILY SSF103473 22 414 1.57E-36 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS10320 d8c54bda9e670b63aee85c03a36ee28b 416 Pfam PF05977 Transmembrane secretion effector 20 410 8.8E-33 T 28-03-2018 IPR010290 Transmembrane secretion effector APY29_RS19420 87820a296e1f193a79446d6233e01af4 425 SUPERFAMILY SSF103473 11 414 1.27E-30 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS19420 87820a296e1f193a79446d6233e01af4 425 Pfam PF07690 Major Facilitator Superfamily 18 376 2.5E-13 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS19420 87820a296e1f193a79446d6233e01af4 425 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 93 411 4.4E-127 T 28-03-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 APY29_RS19420 87820a296e1f193a79446d6233e01af4 425 Gene3D G3DSA:1.20.1250.20 234 416 8.5E-10 T 28-03-2018 APY29_RS19420 87820a296e1f193a79446d6233e01af4 425 Gene3D G3DSA:1.20.1250.20 7 228 3.7E-20 T 28-03-2018 APY29_RS19220 8b02411427d75ad36695d1ae5aebab4b 197 SUPERFAMILY SSF63380 1 93 4.34E-24 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APY29_RS19220 8b02411427d75ad36695d1ae5aebab4b 197 Gene3D G3DSA:2.40.30.20 1 89 1.7E-26 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS19220 8b02411427d75ad36695d1ae5aebab4b 197 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 194 5.8E-61 T 28-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 APY29_RS19220 8b02411427d75ad36695d1ae5aebab4b 197 SUPERFAMILY SSF63380 93 195 1.87E-32 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APY29_RS19220 8b02411427d75ad36695d1ae5aebab4b 197 Gene3D G3DSA:2.40.30.20 94 191 1.3E-34 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS19220 8b02411427d75ad36695d1ae5aebab4b 197 PIRSF PIRSF000498 1 197 3.2E-74 T 28-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 APY29_RS19220 8b02411427d75ad36695d1ae5aebab4b 197 Pfam PF00677 Lumazine binding domain 3 87 2.3E-20 T 28-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 APY29_RS19220 8b02411427d75ad36695d1ae5aebab4b 197 Pfam PF00677 Lumazine binding domain 100 184 7.3E-25 T 28-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 APY29_RS16825 2932e430cacb678e523b21407205a03d 213 Pfam PF00072 Response regulator receiver domain 4 115 1.1E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS16825 2932e430cacb678e523b21407205a03d 213 SUPERFAMILY SSF52172 1 133 2.56E-35 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS16825 2932e430cacb678e523b21407205a03d 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 206 1.0E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS16825 2932e430cacb678e523b21407205a03d 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 2.1E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS16825 2932e430cacb678e523b21407205a03d 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 2.1E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS16825 2932e430cacb678e523b21407205a03d 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 2.1E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS16825 2932e430cacb678e523b21407205a03d 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS16825 2932e430cacb678e523b21407205a03d 213 Gene3D G3DSA:3.40.50.2300 1 126 7.9E-36 T 28-03-2018 APY29_RS16825 2932e430cacb678e523b21407205a03d 213 SMART SM00448 2 115 6.1E-35 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS16825 2932e430cacb678e523b21407205a03d 213 SMART SM00421 150 207 1.0E-25 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS16825 2932e430cacb678e523b21407205a03d 213 SUPERFAMILY SSF46894 145 212 3.74E-22 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS16825 2932e430cacb678e523b21407205a03d 213 Gene3D G3DSA:1.10.10.10 127 213 2.3E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS15330 f03822d624d9fbff469ca1f1befb88f9 272 SUPERFAMILY SSF51735 26 235 8.79E-24 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS15330 f03822d624d9fbff469ca1f1befb88f9 272 Pfam PF00106 short chain dehydrogenase 25 199 1.4E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS15330 f03822d624d9fbff469ca1f1befb88f9 272 Gene3D G3DSA:3.40.50.720 24 220 1.3E-22 T 28-03-2018 APY29_RS11480 1994af3001af79a1410fdef8eae48831 126 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 17 110 4.2E-34 T 28-03-2018 IPR019110 Uncharacterised protein family, RAQPRD APY29_RS11480 1994af3001af79a1410fdef8eae48831 126 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 35 109 2.5E-26 T 28-03-2018 IPR019110 Uncharacterised protein family, RAQPRD APY29_RS06890 f5dbf4d97af7324895af095460a94785 246 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 16 240 45.381 T 28-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 APY29_RS06890 f5dbf4d97af7324895af095460a94785 246 Gene3D G3DSA:1.10.3810.10 61 239 1.0E-51 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 APY29_RS06890 f5dbf4d97af7324895af095460a94785 246 Pfam PF00912 Transglycosylase 70 227 2.4E-45 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 APY29_RS06890 f5dbf4d97af7324895af095460a94785 246 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 19 238 1.0E-85 T 28-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 APY29_RS06890 f5dbf4d97af7324895af095460a94785 246 SUPERFAMILY SSF53955 68 238 8.15E-57 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS02855 c61ce7168faba6b16472497829e30b65 455 Pfam PF07063 Domain of unknown function (DUF1338) 11 410 8.6E-121 T 28-03-2018 IPR009770 Domain of unknown function DUF1338 APY29_RS02855 c61ce7168faba6b16472497829e30b65 455 SMART SM01150 13 410 4.1E-229 T 28-03-2018 IPR009770 Domain of unknown function DUF1338 APY29_RS02855 c61ce7168faba6b16472497829e30b65 455 Gene3D G3DSA:3.10.180.10 49 349 2.4E-4 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS04275 0180801a4c6048de117c091f2d17af9c 210 Gene3D G3DSA:3.40.1080.10 3 210 1.2E-71 T 28-03-2018 APY29_RS04275 0180801a4c6048de117c091f2d17af9c 210 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 28-03-2018 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 Reactome: R-HSA-77108 APY29_RS04275 0180801a4c6048de117c091f2d17af9c 210 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 208 1.9E-100 T 28-03-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 APY29_RS04275 0180801a4c6048de117c091f2d17af9c 210 Pfam PF01144 Coenzyme A transferase 7 198 2.0E-42 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 APY29_RS04275 0180801a4c6048de117c091f2d17af9c 210 SUPERFAMILY SSF100950 3 208 1.21E-73 T 28-03-2018 APY29_RS04275 0180801a4c6048de117c091f2d17af9c 210 SMART SM00882 6 202 1.2E-78 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 APY29_RS13375 7d5a4e13e31b4d38fe9adbb9ecd14857 82 Gene3D G3DSA:2.30.30.90 1 81 1.3E-19 T 28-03-2018 APY29_RS13375 7d5a4e13e31b4d38fe9adbb9ecd14857 82 SUPERFAMILY SSF50037 3 76 1.08E-13 T 28-03-2018 IPR008988 Transcriptional repressor, C-terminal APY29_RS13375 7d5a4e13e31b4d38fe9adbb9ecd14857 82 SMART SM00899 1 77 1.3E-17 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 APY29_RS13375 7d5a4e13e31b4d38fe9adbb9ecd14857 82 Pfam PF04023 FeoA domain 1 76 2.9E-18 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 APY29_RS03270 77e07fef78c8d36eac7af57258bf44fd 308 SUPERFAMILY SSF53850 87 297 3.62E-38 T 28-03-2018 APY29_RS03270 77e07fef78c8d36eac7af57258bf44fd 308 SUPERFAMILY SSF46785 3 112 1.36E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS03270 77e07fef78c8d36eac7af57258bf44fd 308 Gene3D G3DSA:3.40.190.10 176 265 6.8E-18 T 28-03-2018 APY29_RS03270 77e07fef78c8d36eac7af57258bf44fd 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.8E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS03270 77e07fef78c8d36eac7af57258bf44fd 308 Gene3D G3DSA:3.40.190.10 86 175 5.6E-15 T 28-03-2018 APY29_RS03270 77e07fef78c8d36eac7af57258bf44fd 308 Gene3D G3DSA:1.10.10.10 3 85 9.0E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS03270 77e07fef78c8d36eac7af57258bf44fd 308 Pfam PF03466 LysR substrate binding domain 88 295 3.0E-35 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS13965 5a422c16e52a97546d2c857594b5702a 70 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 55 1.4E-27 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 APY29_RS13965 5a422c16e52a97546d2c857594b5702a 70 Pfam PF02599 Global regulator protein family 1 52 4.7E-27 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 APY29_RS13965 5a422c16e52a97546d2c857594b5702a 70 SUPERFAMILY SSF117130 1 53 8.89E-21 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 APY29_RS13965 5a422c16e52a97546d2c857594b5702a 70 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-20 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 APY29_RS13965 5a422c16e52a97546d2c857594b5702a 70 Hamap MF_00167 Carbon storage regulator [csrA]. 1 70 21.753 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 APY29_RS13200 ba989c3cdd99ab5d60b8c6bbee897506 286 SMART SM00138 19 281 7.7E-87 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APY29_RS13200 ba989c3cdd99ab5d60b8c6bbee897506 286 PRINTS PR00996 Glutamate methyltransferase family signature 80 92 1.2E-38 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APY29_RS13200 ba989c3cdd99ab5d60b8c6bbee897506 286 PRINTS PR00996 Glutamate methyltransferase family signature 115 135 1.2E-38 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APY29_RS13200 ba989c3cdd99ab5d60b8c6bbee897506 286 PRINTS PR00996 Glutamate methyltransferase family signature 240 263 1.2E-38 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APY29_RS13200 ba989c3cdd99ab5d60b8c6bbee897506 286 PRINTS PR00996 Glutamate methyltransferase family signature 221 235 1.2E-38 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APY29_RS13200 ba989c3cdd99ab5d60b8c6bbee897506 286 PRINTS PR00996 Glutamate methyltransferase family signature 41 54 1.2E-38 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APY29_RS13200 ba989c3cdd99ab5d60b8c6bbee897506 286 PRINTS PR00996 Glutamate methyltransferase family signature 149 165 1.2E-38 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APY29_RS13200 ba989c3cdd99ab5d60b8c6bbee897506 286 PIRSF PIRSF000410 1 282 5.6E-89 T 28-03-2018 IPR026024 Chemotaxis protein methyltransferase CheR APY29_RS13200 ba989c3cdd99ab5d60b8c6bbee897506 286 Pfam PF01739 CheR methyltransferase, SAM binding domain 87 271 1.1E-48 T 28-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal APY29_RS13200 ba989c3cdd99ab5d60b8c6bbee897506 286 SUPERFAMILY SSF47757 11 86 1.44E-23 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal APY29_RS13200 ba989c3cdd99ab5d60b8c6bbee897506 286 Pfam PF03705 CheR methyltransferase, all-alpha domain 21 70 4.6E-18 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal APY29_RS13200 ba989c3cdd99ab5d60b8c6bbee897506 286 Gene3D G3DSA:3.40.50.150 86 281 7.7E-40 T 28-03-2018 APY29_RS13200 ba989c3cdd99ab5d60b8c6bbee897506 286 Gene3D G3DSA:1.10.155.10 11 85 6.4E-25 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal APY29_RS13200 ba989c3cdd99ab5d60b8c6bbee897506 286 SUPERFAMILY SSF53335 87 278 1.6E-48 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS10285 ead0d0d9aaf951d45c17adfefb2c0c89 454 Pfam PF13520 Amino acid permease 13 422 4.8E-38 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APY29_RS10285 ead0d0d9aaf951d45c17adfefb2c0c89 454 PIRSF PIRSF006060 1 447 1.3E-65 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APY29_RS10285 ead0d0d9aaf951d45c17adfefb2c0c89 454 TIGRFAM TIGR00908 2A0305: ethanolamine permease 7 439 6.8E-183 T 28-03-2018 IPR004757 Ethanolamine permease APY29_RS17305 8325e51d527122854d04a9ee43324093 332 SUPERFAMILY SSF53590 41 328 2.88E-55 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APY29_RS17305 8325e51d527122854d04a9ee43324093 332 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 41 321 1.9E-45 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APY29_RS17305 8325e51d527122854d04a9ee43324093 332 Gene3D G3DSA:3.90.245.10 39 331 4.4E-59 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APY29_RS17805 7cd25de0c0ab62b952323d0927e9d758 286 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 15 277 1.5E-97 T 28-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 APY29_RS17805 7cd25de0c0ab62b952323d0927e9d758 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 278 2.1E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS17805 7cd25de0c0ab62b952323d0927e9d758 286 SUPERFAMILY SSF161098 24 274 1.44E-55 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS17805 7cd25de0c0ab62b952323d0927e9d758 286 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 17 280 4.4E-126 T 28-03-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 APY29_RS17805 7cd25de0c0ab62b952323d0927e9d758 286 Gene3D G3DSA:1.10.3720.10 20 284 4.2E-45 T 28-03-2018 APY29_RS21940 8981ddff1a283e4c3d4986e637749ec9 236 Gene3D G3DSA:1.10.10.60 122 191 2.1E-4 T 28-03-2018 APY29_RS21940 8981ddff1a283e4c3d4986e637749ec9 236 Gene3D G3DSA:1.10.10.60 192 236 2.0E-6 T 28-03-2018 APY29_RS21940 8981ddff1a283e4c3d4986e637749ec9 236 SMART SM00342 155 231 3.6E-5 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS21940 8981ddff1a283e4c3d4986e637749ec9 236 Pfam PF12833 Helix-turn-helix domain 162 232 8.6E-10 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS04145 6643658ecd6c01ce9dc202bf79703085 261 Pfam PF01061 ABC-2 type transporter 13 222 1.0E-26 T 28-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 APY29_RS13270 11f5373c811afc60f47fbf51e7300685 505 Pfam PF01336 OB-fold nucleic acid binding domain 70 145 2.5E-14 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APY29_RS13270 11f5373c811afc60f47fbf51e7300685 505 Gene3D G3DSA:3.30.930.10 156 501 1.7E-97 T 28-03-2018 APY29_RS13270 11f5373c811afc60f47fbf51e7300685 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 2.8E-39 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 APY29_RS13270 11f5373c811afc60f47fbf51e7300685 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 2.8E-39 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 APY29_RS13270 11f5373c811afc60f47fbf51e7300685 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 2.8E-39 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 APY29_RS13270 11f5373c811afc60f47fbf51e7300685 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 2.8E-39 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 APY29_RS13270 11f5373c811afc60f47fbf51e7300685 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 2.8E-39 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 APY29_RS13270 11f5373c811afc60f47fbf51e7300685 505 SUPERFAMILY SSF50249 13 155 6.0E-38 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS13270 11f5373c811afc60f47fbf51e7300685 505 SUPERFAMILY SSF55681 162 502 4.24E-117 T 28-03-2018 APY29_RS13270 11f5373c811afc60f47fbf51e7300685 505 Gene3D G3DSA:2.40.50.140 14 155 1.3E-33 T 28-03-2018 APY29_RS13270 11f5373c811afc60f47fbf51e7300685 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 163 501 2.1E-81 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS13270 11f5373c811afc60f47fbf51e7300685 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 504 3.1E-198 T 28-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 APY29_RS13270 11f5373c811afc60f47fbf51e7300685 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 20 504 43.726 T 28-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 APY29_RS12800 46a9012581b24de70370284bd9acd7bd 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 178 1.3E-5 T 28-03-2018 APY29_RS12800 46a9012581b24de70370284bd9acd7bd 244 Gene3D G3DSA:3.40.50.720 56 244 1.3E-46 T 28-03-2018 APY29_RS12800 46a9012581b24de70370284bd9acd7bd 244 Gene3D G3DSA:3.40.50.720 6 55 4.1E-13 T 28-03-2018 APY29_RS12800 46a9012581b24de70370284bd9acd7bd 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 241 6.1E-45 T 28-03-2018 APY29_RS12800 46a9012581b24de70370284bd9acd7bd 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.0E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS12800 46a9012581b24de70370284bd9acd7bd 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.0E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS12800 46a9012581b24de70370284bd9acd7bd 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 1.0E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS12800 46a9012581b24de70370284bd9acd7bd 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.0E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS12800 46a9012581b24de70370284bd9acd7bd 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.0E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS12800 46a9012581b24de70370284bd9acd7bd 244 SUPERFAMILY SSF51735 12 243 5.24E-66 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS01915 155b57e305ec85c58eaf8a92daa51788 229 Pfam PF07277 SapC 3 219 1.1E-65 T 28-03-2018 IPR010836 SapC APY29_RS05115 17c8e53a9e8178197329d307def50719 290 PRINTS PR00169 Potassium channel signature 189 211 1.6E-26 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 APY29_RS05115 17c8e53a9e8178197329d307def50719 290 PRINTS PR00169 Potassium channel signature 131 157 1.6E-26 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 APY29_RS05115 17c8e53a9e8178197329d307def50719 290 PRINTS PR00169 Potassium channel signature 69 92 1.6E-26 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 APY29_RS05115 17c8e53a9e8178197329d307def50719 290 PRINTS PR00169 Potassium channel signature 95 115 1.6E-26 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 APY29_RS05115 17c8e53a9e8178197329d307def50719 290 PRINTS PR00169 Potassium channel signature 218 244 1.6E-26 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 APY29_RS05115 17c8e53a9e8178197329d307def50719 290 PRINTS PR00169 Potassium channel signature 160 183 1.6E-26 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 APY29_RS05115 17c8e53a9e8178197329d307def50719 290 PRINTS PR00169 Potassium channel signature 27 55 1.6E-26 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 APY29_RS05115 17c8e53a9e8178197329d307def50719 290 SUPERFAMILY SSF81324 30 244 1.24E-52 T 28-03-2018 APY29_RS05115 17c8e53a9e8178197329d307def50719 290 Gene3D G3DSA:1.10.287.70 160 208 9.2E-13 T 28-03-2018 APY29_RS05115 17c8e53a9e8178197329d307def50719 290 Pfam PF00520 Ion transport protein 34 240 1.1E-30 T 28-03-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 APY29_RS05115 17c8e53a9e8178197329d307def50719 290 Gene3D G3DSA:1.20.5.110 210 246 1.5E-12 T 28-03-2018 APY29_RS05115 17c8e53a9e8178197329d307def50719 290 Gene3D G3DSA:1.20.120.350 31 159 1.1E-27 T 28-03-2018 APY29_RS13870 b00690411459a3d74bd14fc22d9633ff 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 107 8.6E-18 T 28-03-2018 IPR022569 Ferredoxin, C-terminal APY29_RS13870 b00690411459a3d74bd14fc22d9633ff 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APY29_RS13870 b00690411459a3d74bd14fc22d9633ff 107 SUPERFAMILY SSF54862 2 86 6.9E-24 T 28-03-2018 APY29_RS13870 b00690411459a3d74bd14fc22d9633ff 107 Gene3D G3DSA:3.30.70.20 2 45 1.1E-12 T 28-03-2018 APY29_RS13870 b00690411459a3d74bd14fc22d9633ff 107 Pfam PF00037 4Fe-4S binding domain 34 56 3.5E-7 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APY29_RS13870 b00690411459a3d74bd14fc22d9633ff 107 Gene3D G3DSA:3.30.70.20 46 107 3.9E-10 T 28-03-2018 APY29_RS13870 b00690411459a3d74bd14fc22d9633ff 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.6E-16 T 28-03-2018 IPR000813 7Fe ferredoxin GO:0009055 APY29_RS13870 b00690411459a3d74bd14fc22d9633ff 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.6E-16 T 28-03-2018 IPR000813 7Fe ferredoxin GO:0009055 APY29_RS13870 b00690411459a3d74bd14fc22d9633ff 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.6E-16 T 28-03-2018 IPR000813 7Fe ferredoxin GO:0009055 APY29_RS14515 3ff9ef4e33060f7130bbca639074ba4d 91 TIGRFAM TIGR02610 PHA_gran_rgn: putative polyhydroxyalkanoic acid system protein 1 91 9.9E-44 T 28-03-2018 IPR013433 Putative polyhydroxyalkanoic acid system protein APY29_RS14515 3ff9ef4e33060f7130bbca639074ba4d 91 Pfam PF09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) 4 90 4.5E-29 T 28-03-2018 IPR013433 Putative polyhydroxyalkanoic acid system protein APY29_RS12965 f63e1ac2dee86d62b74f8c563d6e4477 208 SUPERFAMILY SSF75708 38 207 6.15E-38 T 28-03-2018 APY29_RS12965 f63e1ac2dee86d62b74f8c563d6e4477 208 Gene3D G3DSA:1.10.287.500 2 166 5.4E-6 T 28-03-2018 APY29_RS12965 f63e1ac2dee86d62b74f8c563d6e4477 208 PIRSF PIRSF002884 123 208 7.8E-26 T 28-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 APY29_RS12965 f63e1ac2dee86d62b74f8c563d6e4477 208 PIRSF PIRSF002884 24 127 1.0E-27 T 28-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 APY29_RS12965 f63e1ac2dee86d62b74f8c563d6e4477 208 Pfam PF04344 Chemotaxis phosphatase, CheZ 125 207 1.2E-13 T 28-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 APY29_RS12965 f63e1ac2dee86d62b74f8c563d6e4477 208 Pfam PF04344 Chemotaxis phosphatase, CheZ 48 113 5.6E-11 T 28-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 APY29_RS06500 eafe4ba8d9fd90cb99d0a934f4a19dd7 372 Gene3D G3DSA:3.20.20.70 3 313 1.7E-42 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS06500 eafe4ba8d9fd90cb99d0a934f4a19dd7 372 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 5 358 1.4E-160 T 28-03-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 APY29_RS06500 eafe4ba8d9fd90cb99d0a934f4a19dd7 372 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 241 325 1.5E-9 T 28-03-2018 IPR023885 4Fe4S-binding SPASM domain APY29_RS06500 eafe4ba8d9fd90cb99d0a934f4a19dd7 372 Pfam PF13353 4Fe-4S single cluster domain 14 91 3.5E-5 T 28-03-2018 APY29_RS06500 eafe4ba8d9fd90cb99d0a934f4a19dd7 372 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 370 173.847 T 28-03-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 APY29_RS06500 eafe4ba8d9fd90cb99d0a934f4a19dd7 372 SUPERFAMILY SSF102114 6 313 7.46E-69 T 28-03-2018 APY29_RS06500 eafe4ba8d9fd90cb99d0a934f4a19dd7 372 Pfam PF13186 Iron-sulfur cluster-binding domain 238 304 5.6E-12 T 28-03-2018 IPR023885 4Fe4S-binding SPASM domain APY29_RS06500 eafe4ba8d9fd90cb99d0a934f4a19dd7 372 Pfam PF04055 Radical SAM superfamily 13 158 2.1E-18 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 APY29_RS06500 eafe4ba8d9fd90cb99d0a934f4a19dd7 372 PIRSF PIRSF037420 1 352 5.0E-120 T 28-03-2018 APY29_RS03885 322bf1c66bb55ba44307ce29a18887fc 468 Gene3D G3DSA:3.40.50.300 73 351 6.3E-91 T 28-03-2018 APY29_RS03885 322bf1c66bb55ba44307ce29a18887fc 468 SMART SM00382 140 331 0.0014 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS03885 322bf1c66bb55ba44307ce29a18887fc 468 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 70 1.7E-17 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APY29_RS03885 322bf1c66bb55ba44307ce29a18887fc 468 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 346 1.3E-61 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APY29_RS03885 322bf1c66bb55ba44307ce29a18887fc 468 SUPERFAMILY SSF50615 1 71 5.23E-24 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APY29_RS03885 322bf1c66bb55ba44307ce29a18887fc 468 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 56.279 T 28-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 APY29_RS03885 322bf1c66bb55ba44307ce29a18887fc 468 SUPERFAMILY SSF47917 349 464 2.51E-54 T 28-03-2018 APY29_RS03885 322bf1c66bb55ba44307ce29a18887fc 468 SUPERFAMILY SSF52540 75 352 2.2E-89 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS03885 322bf1c66bb55ba44307ce29a18887fc 468 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APY29_RS03885 322bf1c66bb55ba44307ce29a18887fc 468 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 1.1E-252 T 28-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 APY29_RS03885 322bf1c66bb55ba44307ce29a18887fc 468 Gene3D G3DSA:1.10.1140.10 352 462 2.0E-44 T 28-03-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APY29_RS03885 322bf1c66bb55ba44307ce29a18887fc 468 Gene3D G3DSA:2.40.10.170 1 72 2.2E-27 T 28-03-2018 APY29_RS08870 843cfe555ff67b20adda42f12aa57e03 381 SUPERFAMILY SSF51246 304 370 1.26E-14 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 APY29_RS08870 843cfe555ff67b20adda42f12aa57e03 381 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 352 5.4E-117 T 28-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 APY29_RS08870 843cfe555ff67b20adda42f12aa57e03 381 SUPERFAMILY SSF56059 98 299 1.52E-63 T 28-03-2018 APY29_RS08870 843cfe555ff67b20adda42f12aa57e03 381 Gene3D G3DSA:3.30.470.20 181 377 3.4E-38 T 28-03-2018 APY29_RS08870 843cfe555ff67b20adda42f12aa57e03 381 Pfam PF02222 ATP-grasp domain 107 279 7.6E-59 T 28-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type APY29_RS08870 843cfe555ff67b20adda42f12aa57e03 381 Gene3D G3DSA:3.30.1490.20 114 179 6.1E-17 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APY29_RS08870 843cfe555ff67b20adda42f12aa57e03 381 Gene3D G3DSA:3.40.50.20 1 87 8.8E-24 T 28-03-2018 APY29_RS08870 843cfe555ff67b20adda42f12aa57e03 381 SUPERFAMILY SSF52440 3 95 1.34E-22 T 28-03-2018 IPR016185 Pre-ATP-grasp domain APY29_RS08870 843cfe555ff67b20adda42f12aa57e03 381 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 351 42.355 T 28-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 APY29_RS14845 ec28ebdcfaedef2f2cc841e09ebdcffb 273 Pfam PF06945 Protein of unknown function (DUF1289) 21 62 2.7E-18 T 28-03-2018 IPR010710 Protein of unknown function DUF1289 APY29_RS14845 ec28ebdcfaedef2f2cc841e09ebdcffb 273 SUPERFAMILY SSF55811 113 262 1.0E-31 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 APY29_RS14845 ec28ebdcfaedef2f2cc841e09ebdcffb 273 Gene3D G3DSA:3.90.79.10 102 269 4.6E-37 T 28-03-2018 APY29_RS14845 ec28ebdcfaedef2f2cc841e09ebdcffb 273 Pfam PF00293 NUDIX domain 119 220 5.1E-12 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 APY29_RS04350 24ae1d2bbb69d5daaef9006704037ab1 657 SUPERFAMILY SSF48435 26 471 3.14E-100 T 28-03-2018 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 APY29_RS04350 24ae1d2bbb69d5daaef9006704037ab1 657 Pfam PF01464 Transglycosylase SLT domain 478 590 4.4E-25 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 APY29_RS04350 24ae1d2bbb69d5daaef9006704037ab1 657 Gene3D G3DSA:1.10.1240.20 397 459 4.1E-15 T 28-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 APY29_RS04350 24ae1d2bbb69d5daaef9006704037ab1 657 SUPERFAMILY SSF53955 475 633 3.22E-45 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS04350 24ae1d2bbb69d5daaef9006704037ab1 657 Pfam PF14718 Soluble lytic murein transglycosylase L domain 399 457 5.3E-10 T 28-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 APY29_RS04350 24ae1d2bbb69d5daaef9006704037ab1 657 Gene3D G3DSA:1.25.20.10 25 381 2.7E-30 T 28-03-2018 APY29_RS04350 24ae1d2bbb69d5daaef9006704037ab1 657 Gene3D G3DSA:1.10.530.10 467 633 3.9E-34 T 28-03-2018 APY29_RS18330 d14e8f54f18c52e98cecc4fbd008a813 785 Pfam PF07793 Protein of unknown function (DUF1631) 11 775 1.1E-208 T 28-03-2018 IPR012434 Protein of unknown function DUF1631 APY29_RS20935 f06b0e7bd91f41faad456dae2e64b78d 143 Pfam PF06903 VirK protein 26 120 2.7E-38 T 28-03-2018 IPR010694 Uncharacterised protein family VirK APY29_RS20755 2067ea35cc718223d975f33968b16f53 310 ProSitePatterns PS01058 SAICAR synthetase signature 2. 218 226 - T 28-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APY29_RS20755 2067ea35cc718223d975f33968b16f53 310 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 15 306 28.7 T 28-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APY29_RS20755 2067ea35cc718223d975f33968b16f53 310 Pfam PF01259 SAICAR synthetase 19 281 1.1E-98 T 28-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APY29_RS20755 2067ea35cc718223d975f33968b16f53 310 SUPERFAMILY SSF56104 7 307 6.87E-101 T 28-03-2018 APY29_RS20755 2067ea35cc718223d975f33968b16f53 310 ProSitePatterns PS01057 SAICAR synthetase signature 1. 119 133 - T 28-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APY29_RS20755 2067ea35cc718223d975f33968b16f53 310 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 20 305 5.8E-75 T 28-03-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 APY29_RS20755 2067ea35cc718223d975f33968b16f53 310 Gene3D G3DSA:3.30.200.20 5 126 5.2E-32 T 28-03-2018 APY29_RS20755 2067ea35cc718223d975f33968b16f53 310 Gene3D G3DSA:3.30.470.20 127 262 2.1E-55 T 28-03-2018 APY29_RS14405 df58f627b6f688fda1042ce958f120ca 690 SMART SM00448 570 682 3.6E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS14405 df58f627b6f688fda1042ce958f120ca 690 SMART SM00388 316 384 3.9E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS14405 df58f627b6f688fda1042ce958f120ca 690 SUPERFAMILY SSF52172 569 687 1.57E-25 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS14405 df58f627b6f688fda1042ce958f120ca 690 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 426 548 5.8E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS14405 df58f627b6f688fda1042ce958f120ca 690 Gene3D G3DSA:3.40.50.2300 564 689 2.0E-24 T 28-03-2018 APY29_RS14405 df58f627b6f688fda1042ce958f120ca 690 Gene3D G3DSA:1.10.287.130 302 380 3.3E-8 T 28-03-2018 APY29_RS14405 df58f627b6f688fda1042ce958f120ca 690 Gene3D G3DSA:3.30.450.20 139 301 3.8E-29 T 28-03-2018 APY29_RS14405 df58f627b6f688fda1042ce958f120ca 690 SMART SM00091 156 222 1.9E-6 T 28-03-2018 IPR000014 PAS domain APY29_RS14405 df58f627b6f688fda1042ce958f120ca 690 Pfam PF08448 PAS fold 163 270 1.2E-21 T 28-03-2018 IPR013656 PAS fold-4 APY29_RS14405 df58f627b6f688fda1042ce958f120ca 690 SMART SM00387 425 550 5.1E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS14405 df58f627b6f688fda1042ce958f120ca 690 SUPERFAMILY SSF55874 375 548 7.2E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS14405 df58f627b6f688fda1042ce958f120ca 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 547 8.4E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS14405 df58f627b6f688fda1042ce958f120ca 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 507 8.4E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS14405 df58f627b6f688fda1042ce958f120ca 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 493 8.4E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS14405 df58f627b6f688fda1042ce958f120ca 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 510 528 8.4E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS14405 df58f627b6f688fda1042ce958f120ca 690 Gene3D G3DSA:3.30.565.10 382 549 3.5E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS14405 df58f627b6f688fda1042ce958f120ca 690 SUPERFAMILY SSF55785 144 267 1.68E-24 T 28-03-2018 IPR000014 PAS domain APY29_RS14405 df58f627b6f688fda1042ce958f120ca 690 Pfam PF00072 Response regulator receiver domain 572 677 7.7E-16 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS14405 df58f627b6f688fda1042ce958f120ca 690 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 271 5.0E-11 T 28-03-2018 IPR000014 PAS domain APY29_RS14405 df58f627b6f688fda1042ce958f120ca 690 Pfam PF00512 His Kinase A (phospho-acceptor) domain 317 383 1.0E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS14405 df58f627b6f688fda1042ce958f120ca 690 SUPERFAMILY SSF47384 299 382 7.85E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS11125 bb2de92d04359e099f6b67d99dfc91d2 82 SUPERFAMILY SSF109910 3 79 3.92E-23 T 28-03-2018 IPR005631 Flavinator of succinate dehydrogenase APY29_RS11125 bb2de92d04359e099f6b67d99dfc91d2 82 Pfam PF03937 Flavinator of succinate dehydrogenase 8 77 3.6E-23 T 28-03-2018 IPR005631 Flavinator of succinate dehydrogenase APY29_RS11125 bb2de92d04359e099f6b67d99dfc91d2 82 Gene3D G3DSA:1.10.150.250 1 81 2.0E-23 T 28-03-2018 APY29_RS16795 f80172821f1a86360df027e653233fbf 59 SUPERFAMILY SSF47598 1 56 6.12E-11 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 APY29_RS16795 f80172821f1a86360df027e653233fbf 59 Gene3D G3DSA:1.10.1220.10 4 44 4.0E-15 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APY29_RS07570 74b6cf538f8d2430a511c741fe1fafc2 188 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 6 188 37.593 T 28-03-2018 IPR003774 Protein of unknown function UPF0301 APY29_RS07570 74b6cf538f8d2430a511c741fe1fafc2 188 SUPERFAMILY SSF143456 6 188 9.94E-63 T 28-03-2018 APY29_RS07570 74b6cf538f8d2430a511c741fe1fafc2 188 Gene3D G3DSA:3.30.70.1300 47 116 2.2E-28 T 28-03-2018 APY29_RS07570 74b6cf538f8d2430a511c741fe1fafc2 188 Gene3D G3DSA:3.40.1740.10 117 179 1.2E-9 T 28-03-2018 APY29_RS07570 74b6cf538f8d2430a511c741fe1fafc2 188 Pfam PF02622 Uncharacterized ACR, COG1678 17 175 7.9E-48 T 28-03-2018 IPR003774 Protein of unknown function UPF0301 APY29_RS01970 b5eb549b4f10ac49a505210a9ef17194 330 Gene3D G3DSA:3.20.20.70 1 330 5.0E-151 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS01970 b5eb549b4f10ac49a505210a9ef17194 330 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 245 257 - T 28-03-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 APY29_RS01970 b5eb549b4f10ac49a505210a9ef17194 330 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 325 7.7E-140 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 APY29_RS01970 b5eb549b4f10ac49a505210a9ef17194 330 SUPERFAMILY SSF51569 2 328 1.47E-142 T 28-03-2018 APY29_RS01970 b5eb549b4f10ac49a505210a9ef17194 330 PIRSF PIRSF001415 1 329 7.5E-150 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 APY29_RS01970 b5eb549b4f10ac49a505210a9ef17194 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 245 261 9.1E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 APY29_RS01970 b5eb549b4f10ac49a505210a9ef17194 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 191 210 9.1E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 APY29_RS01970 b5eb549b4f10ac49a505210a9ef17194 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 122 136 9.1E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 APY29_RS01970 b5eb549b4f10ac49a505210a9ef17194 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 153 172 9.1E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 APY29_RS01970 b5eb549b4f10ac49a505210a9ef17194 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 300 319 9.1E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 APY29_RS01970 b5eb549b4f10ac49a505210a9ef17194 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 270 285 9.1E-57 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 APY29_RS01970 b5eb549b4f10ac49a505210a9ef17194 330 SMART SM01004 3 326 1.4E-240 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 APY29_RS05910 cf34cad1a539a3b95bbae76c56aa21c8 142 Gene3D G3DSA:3.30.700.10 7 141 2.4E-27 T 28-03-2018 APY29_RS05910 cf34cad1a539a3b95bbae76c56aa21c8 142 Pfam PF00114 Pilin (bacterial filament) 36 141 6.9E-13 T 28-03-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 APY29_RS05910 cf34cad1a539a3b95bbae76c56aa21c8 142 SUPERFAMILY SSF54523 7 141 2.88E-23 T 28-03-2018 APY29_RS05910 cf34cad1a539a3b95bbae76c56aa21c8 142 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS05910 cf34cad1a539a3b95bbae76c56aa21c8 142 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 2.0E-10 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS05910 cf34cad1a539a3b95bbae76c56aa21c8 142 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 9.9E-12 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS10365 542032af6666b6db32148a50d8d79d17 203 Gene3D G3DSA:3.40.630.30 7 201 2.5E-29 T 28-03-2018 APY29_RS10365 542032af6666b6db32148a50d8d79d17 203 Pfam PF13302 Acetyltransferase (GNAT) domain 23 159 8.7E-16 T 28-03-2018 IPR000182 GNAT domain GO:0008080 APY29_RS10365 542032af6666b6db32148a50d8d79d17 203 SUPERFAMILY SSF55729 13 184 9.7E-34 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS16385 37ce1762807904efcca183eda8796ebd 349 Gene3D G3DSA:2.70.98.10 4 337 7.8E-100 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 APY29_RS16385 37ce1762807904efcca183eda8796ebd 349 PIRSF PIRSF005096 1 334 1.2E-97 T 28-03-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 APY29_RS16385 37ce1762807904efcca183eda8796ebd 349 Pfam PF01263 Aldose 1-epimerase 16 330 2.4E-75 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 APY29_RS16385 37ce1762807904efcca183eda8796ebd 349 SUPERFAMILY SSF74650 3 331 3.52E-94 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APY29_RS02345 7cc9a0623c054999f625f844a1b42aed 295 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 120 8.7E-12 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 APY29_RS02345 7cc9a0623c054999f625f844a1b42aed 295 Gene3D G3DSA:3.40.50.720 2 295 9.9E-36 T 28-03-2018 APY29_RS02345 7cc9a0623c054999f625f844a1b42aed 295 SUPERFAMILY SSF51735 1 293 1.79E-41 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS02345 7cc9a0623c054999f625f844a1b42aed 295 Pfam PF08338 Domain of unknown function (DUF1731) 247 292 5.5E-18 T 28-03-2018 IPR013549 Domain of unknown function DUF1731 APY29_RS02345 7cc9a0623c054999f625f844a1b42aed 295 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 4 289 4.0E-103 T 28-03-2018 IPR010099 Epimerase family protein SDR39U1 APY29_RS23030 384bb3e5a282a21d011aca8d8789f0e8 453 SUPERFAMILY SSF103473 30 439 9.94E-54 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS23030 384bb3e5a282a21d011aca8d8789f0e8 453 Gene3D G3DSA:1.20.1250.20 24 228 4.3E-22 T 28-03-2018 APY29_RS23030 384bb3e5a282a21d011aca8d8789f0e8 453 ProSitePatterns PS00216 Sugar transport proteins signature 1. 309 326 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APY29_RS23030 384bb3e5a282a21d011aca8d8789f0e8 453 ProSitePatterns PS00217 Sugar transport proteins signature 2. 135 160 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APY29_RS23030 384bb3e5a282a21d011aca8d8789f0e8 453 Gene3D G3DSA:1.20.1250.20 244 452 1.2E-18 T 28-03-2018 APY29_RS23030 384bb3e5a282a21d011aca8d8789f0e8 453 Pfam PF00083 Sugar (and other) transporter 33 439 9.3E-33 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APY29_RS02020 e171a54a5ba3a49db91a3135dfaf0cc6 711 SMART SM00491 560 691 7.1E-29 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 APY29_RS02020 e171a54a5ba3a49db91a3135dfaf0cc6 711 Pfam PF13307 Helicase C-terminal domain 548 704 3.5E-31 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 APY29_RS02020 e171a54a5ba3a49db91a3135dfaf0cc6 711 SUPERFAMILY SSF52540 59 113 1.16E-15 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS02020 e171a54a5ba3a49db91a3135dfaf0cc6 711 SUPERFAMILY SSF52540 470 484 1.16E-15 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS02020 e171a54a5ba3a49db91a3135dfaf0cc6 711 SUPERFAMILY SSF52540 216 296 1.16E-15 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS02020 e171a54a5ba3a49db91a3135dfaf0cc6 711 SUPERFAMILY SSF52540 516 686 1.16E-15 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS02020 e171a54a5ba3a49db91a3135dfaf0cc6 711 Gene3D G3DSA:3.40.50.300 524 701 3.0E-10 T 28-03-2018 APY29_RS02020 e171a54a5ba3a49db91a3135dfaf0cc6 711 Gene3D G3DSA:3.40.50.300 42 494 3.8E-16 T 28-03-2018 APY29_RS03190 89818973896bb4560720a2b03388dc20 944 SMART SM00490 498 578 7.7E-22 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS03190 89818973896bb4560720a2b03388dc20 944 Gene3D G3DSA:3.40.50.300 454 615 1.1E-34 T 28-03-2018 APY29_RS03190 89818973896bb4560720a2b03388dc20 944 Pfam PF00176 SNF2 family N-terminal domain 117 313 3.6E-16 T 28-03-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 APY29_RS03190 89818973896bb4560720a2b03388dc20 944 SUPERFAMILY SSF52540 80 315 5.91E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS03190 89818973896bb4560720a2b03388dc20 944 Pfam PF00271 Helicase conserved C-terminal domain 469 578 2.4E-21 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS03190 89818973896bb4560720a2b03388dc20 944 SMART SM00487 93 315 2.2E-21 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APY29_RS03190 89818973896bb4560720a2b03388dc20 944 SUPERFAMILY SSF52540 237 294 1.09E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS03190 89818973896bb4560720a2b03388dc20 944 SUPERFAMILY SSF52540 455 614 1.09E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS03190 89818973896bb4560720a2b03388dc20 944 Gene3D G3DSA:3.40.50.10810 98 399 1.3E-26 T 28-03-2018 APY29_RS07455 cf2739e5d701ecc5bacac7afe684b94d 772 Gene3D G3DSA:2.170.130.10 30 159 1.1E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS07455 cf2739e5d701ecc5bacac7afe684b94d 772 Gene3D G3DSA:2.40.170.20 160 772 1.1E-75 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS07455 cf2739e5d701ecc5bacac7afe684b94d 772 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 157 9.4E-18 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS07455 cf2739e5d701ecc5bacac7afe684b94d 772 Pfam PF00593 TonB dependent receptor 242 771 1.3E-48 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS07455 cf2739e5d701ecc5bacac7afe684b94d 772 SUPERFAMILY SSF56935 29 772 2.96E-121 T 28-03-2018 APY29_RS07455 cf2739e5d701ecc5bacac7afe684b94d 772 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 60 772 3.4E-74 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APY29_RS17505 cc45f86c3721e6ae9af0241510243aca 165 Pfam PF01967 MoaC family 21 157 1.9E-47 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 APY29_RS17505 cc45f86c3721e6ae9af0241510243aca 165 SUPERFAMILY SSF55040 18 160 1.05E-47 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 APY29_RS17505 cc45f86c3721e6ae9af0241510243aca 165 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 8 165 31.354 T 28-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 APY29_RS17505 cc45f86c3721e6ae9af0241510243aca 165 Gene3D G3DSA:3.30.70.640 8 163 2.1E-57 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 APY29_RS17505 cc45f86c3721e6ae9af0241510243aca 165 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 10 159 1.2E-50 T 28-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 APY29_RS15795 60f023748437af904e52510aefd643a1 645 Pfam PF05960 Bacterial protein of unknown function (DUF885) 101 636 3.6E-167 T 28-03-2018 IPR010281 Protein of unknown function DUF885 APY29_RS13480 4232c80ed1395f4a5653f6b6974cad20 244 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 5 240 1.3E-72 T 28-03-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 APY29_RS13480 4232c80ed1395f4a5653f6b6974cad20 244 Gene3D G3DSA:3.20.20.70 3 244 4.5E-47 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS13480 4232c80ed1395f4a5653f6b6974cad20 244 Pfam PF00977 Histidine biosynthesis protein 5 236 1.1E-67 T 28-03-2018 IPR006062 Histidine biosynthesis GO:0000105 APY29_RS13480 4232c80ed1395f4a5653f6b6974cad20 244 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 4 244 31.243 T 28-03-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 APY29_RS13480 4232c80ed1395f4a5653f6b6974cad20 244 SUPERFAMILY SSF51366 3 243 1.02E-59 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APY29_RS21220 1522446c5630ab552742caf5e05d4a7e 205 Gene3D G3DSA:3.40.50.620 40 178 2.5E-34 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS21220 1522446c5630ab552742caf5e05d4a7e 205 Pfam PF02698 DUF218 domain 49 192 1.0E-29 T 28-03-2018 IPR003848 Domain of unknown function DUF218 APY29_RS05485 10332fd020cf0005234cd63d3e315c5f 257 Gene3D G3DSA:1.10.575.10 13 257 5.6E-61 T 28-03-2018 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 APY29_RS05485 10332fd020cf0005234cd63d3e315c5f 257 SUPERFAMILY SSF48537 13 252 2.49E-61 T 28-03-2018 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 APY29_RS05485 10332fd020cf0005234cd63d3e315c5f 257 Pfam PF02265 S1/P1 Nuclease 13 254 4.8E-64 T 28-03-2018 IPR003154 S1/P1 nuclease GO:0003676|GO:0004519|GO:0006308 APY29_RS17000 ea7db7ab84c7ba84a090ae84456c4901 272 Gene3D G3DSA:1.10.3210.10 1 266 4.3E-46 T 28-03-2018 APY29_RS17000 ea7db7ab84c7ba84a090ae84456c4901 272 Pfam PF08668 HDOD domain 13 201 4.8E-52 T 28-03-2018 IPR013976 Metal-dependent hydrolase HDOD APY29_RS17000 ea7db7ab84c7ba84a090ae84456c4901 272 SUPERFAMILY SSF109604 3 261 3.87E-63 T 28-03-2018 APY29_RS17000 ea7db7ab84c7ba84a090ae84456c4901 272 SMART SM00471 101 238 5.5E-4 T 28-03-2018 IPR003607 HD/PDEase domain APY29_RS10980 551edf938b9540fb562b5abd99473156 126 Gene3D G3DSA:3.40.50.2300 2 125 4.7E-13 T 28-03-2018 APY29_RS10980 551edf938b9540fb562b5abd99473156 126 SUPERFAMILY SSF52172 5 120 2.56E-17 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS10980 551edf938b9540fb562b5abd99473156 126 SMART SM00448 7 115 0.003 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS19445 0194d762063a8cdd5befdc1351461975 902 SUPERFAMILY SSF56935 270 475 4.03E-86 T 28-03-2018 APY29_RS19445 0194d762063a8cdd5befdc1351461975 902 SUPERFAMILY SSF56935 740 900 4.03E-86 T 28-03-2018 APY29_RS19445 0194d762063a8cdd5befdc1351461975 902 SUPERFAMILY SSF56935 40 241 4.03E-86 T 28-03-2018 APY29_RS19445 0194d762063a8cdd5befdc1351461975 902 SUPERFAMILY SSF56935 519 713 4.03E-86 T 28-03-2018 APY29_RS19445 0194d762063a8cdd5befdc1351461975 902 Gene3D G3DSA:2.40.170.20 186 900 7.4E-61 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS19445 0194d762063a8cdd5befdc1351461975 902 Gene3D G3DSA:2.170.130.10 39 179 1.1E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS19445 0194d762063a8cdd5befdc1351461975 902 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 48 900 5.1E-221 T 28-03-2018 IPR010104 Bacterial TonB-dependent receptor APY29_RS19445 0194d762063a8cdd5befdc1351461975 902 Pfam PF00593 TonB dependent receptor 407 899 1.5E-35 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS19445 0194d762063a8cdd5befdc1351461975 902 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 172 5.9E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS17700 5fa66c204f0b17801751384e8d15feb4 247 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 247 119.71 T 28-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 APY29_RS17700 5fa66c204f0b17801751384e8d15feb4 247 Pfam PF00149 Calcineurin-like phosphoesterase 1 206 4.9E-9 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 APY29_RS17700 5fa66c204f0b17801751384e8d15feb4 247 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 239 1.5E-107 T 28-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 APY29_RS17700 5fa66c204f0b17801751384e8d15feb4 247 Gene3D G3DSA:3.60.21.10 1 247 9.0E-24 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like APY29_RS17700 5fa66c204f0b17801751384e8d15feb4 247 SUPERFAMILY SSF56300 1 229 2.22E-32 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like APY29_RS12725 9acdead86b53abf30a13062f915d81bf 624 SUPERFAMILY SSF64518 431 621 2.88E-26 T 28-03-2018 APY29_RS12725 9acdead86b53abf30a13062f915d81bf 624 SUPERFAMILY SSF64518 136 441 1.83E-25 T 28-03-2018 APY29_RS12725 9acdead86b53abf30a13062f915d81bf 624 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 3 333 3.2E-68 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APY29_RS12725 9acdead86b53abf30a13062f915d81bf 624 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 1.4E-18 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APY29_RS12725 9acdead86b53abf30a13062f915d81bf 624 PRINTS PR01005 Flagellar hook-associated protein signature 353 375 1.4E-18 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APY29_RS12725 9acdead86b53abf30a13062f915d81bf 624 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 1.4E-18 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APY29_RS12725 9acdead86b53abf30a13062f915d81bf 624 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 1.4E-18 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APY29_RS12725 9acdead86b53abf30a13062f915d81bf 624 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 1.4E-18 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APY29_RS12725 9acdead86b53abf30a13062f915d81bf 624 PRINTS PR01005 Flagellar hook-associated protein signature 403 420 1.4E-18 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APY29_RS12725 9acdead86b53abf30a13062f915d81bf 624 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 565 620 5.6E-12 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain APY29_RS12725 9acdead86b53abf30a13062f915d81bf 624 Gene3D G3DSA:3.90.20.10 64 208 2.1E-5 T 28-03-2018 APY29_RS12725 9acdead86b53abf30a13062f915d81bf 624 Pfam PF00460 Flagella basal body rod protein 4 33 7.2E-9 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 APY29_RS22435 b85880260a2e94efd16b8ad96bfadf44 352 Gene3D G3DSA:3.40.50.1820 75 347 9.1E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS22435 b85880260a2e94efd16b8ad96bfadf44 352 SUPERFAMILY SSF53474 88 339 4.53E-42 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS22435 b85880260a2e94efd16b8ad96bfadf44 352 Pfam PF07859 alpha/beta hydrolase fold 112 313 4.1E-15 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 APY29_RS02805 46c6283b731f30ab86307a77c4c51769 248 SUPERFAMILY SSF55166 48 246 1.41E-61 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 APY29_RS02805 46c6283b731f30ab86307a77c4c51769 248 Pfam PF01427 D-ala-D-ala dipeptidase 47 237 2.9E-42 T 28-03-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 APY29_RS02805 46c6283b731f30ab86307a77c4c51769 248 Gene3D G3DSA:3.30.1380.10 46 248 6.6E-67 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 APY29_RS02805 46c6283b731f30ab86307a77c4c51769 248 PIRSF PIRSF026671 21 248 1.8E-72 T 28-03-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 APY29_RS02805 46c6283b731f30ab86307a77c4c51769 248 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 49 246 31.626 T 28-03-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 APY29_RS05210 0d4a3a457359689ec1b9ec0898f8a615 196 Gene3D G3DSA:3.40.50.10420 1 194 3.6E-50 T 28-03-2018 APY29_RS05210 0d4a3a457359689ec1b9ec0898f8a615 196 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 184 2.4E-46 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase APY29_RS05210 0d4a3a457359689ec1b9ec0898f8a615 196 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 184 2.3E-30 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase APY29_RS05210 0d4a3a457359689ec1b9ec0898f8a615 196 SUPERFAMILY SSF100950 4 190 4.05E-48 T 28-03-2018 APY29_RS05210 0d4a3a457359689ec1b9ec0898f8a615 196 PIRSF PIRSF006806 1 187 4.8E-29 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase APY29_RS03185 6384a21cfaf7dacaf78caaf322d3bb20 923 SUPERFAMILY SSF53335 39 158 2.84E-14 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS03185 6384a21cfaf7dacaf78caaf322d3bb20 923 SUPERFAMILY SSF53335 185 197 2.84E-14 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS03185 6384a21cfaf7dacaf78caaf322d3bb20 923 Pfam PF01555 DNA methylase 107 155 7.3E-8 T 28-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 APY29_RS03185 6384a21cfaf7dacaf78caaf322d3bb20 923 Pfam PF01555 DNA methylase 493 660 3.9E-5 T 28-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 APY29_RS03185 6384a21cfaf7dacaf78caaf322d3bb20 923 SUPERFAMILY SSF53335 488 701 4.14E-16 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS03185 6384a21cfaf7dacaf78caaf322d3bb20 923 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 496 502 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APY29_RS03185 6384a21cfaf7dacaf78caaf322d3bb20 923 Gene3D G3DSA:3.40.50.150 99 669 2.6E-35 T 28-03-2018 APY29_RS18105 7321d68d88379a9d713df90d072003f8 232 Gene3D G3DSA:3.40.50.790 67 150 8.5E-31 T 28-03-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich APY29_RS18105 7321d68d88379a9d713df90d072003f8 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 40.519 T 28-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 APY29_RS18105 7321d68d88379a9d713df90d072003f8 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 28-03-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18105 7321d68d88379a9d713df90d072003f8 232 Gene3D G3DSA:3.30.190.20 151 228 3.8E-21 T 28-03-2018 APY29_RS18105 7321d68d88379a9d713df90d072003f8 232 PIRSF PIRSF002155 1 227 4.2E-71 T 28-03-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18105 7321d68d88379a9d713df90d072003f8 232 Pfam PF00687 Ribosomal protein L1p/L10e family 29 220 2.0E-46 T 28-03-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein APY29_RS18105 7321d68d88379a9d713df90d072003f8 232 SUPERFAMILY SSF56808 5 225 5.89E-75 T 28-03-2018 IPR023674 Ribosomal protein L1-like APY29_RS18105 7321d68d88379a9d713df90d072003f8 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.7E-100 T 28-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 APY29_RS14155 3e5aa5aff62927f3059f8047a9784959 166 Gene3D G3DSA:2.30.110.10 5 165 3.0E-29 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 APY29_RS14155 3e5aa5aff62927f3059f8047a9784959 166 SUPERFAMILY SSF50475 9 139 1.14E-36 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 APY29_RS14155 3e5aa5aff62927f3059f8047a9784959 166 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 8 154 1.8E-51 T 28-03-2018 APY29_RS11665 a0f8aaf7eb8fe1ecc82d0c196e9c4617 186 Pfam PF11198 Protein of unknown function (DUF2857) 8 182 5.7E-61 T 28-03-2018 IPR021364 Protein of unknown function DUF2857 APY29_RS13070 ed0fd7ba407fd0fa5de2c2c4d8fd61a3 260 Pfam PF13614 AAA domain 1 176 3.1E-38 T 28-03-2018 IPR025669 AAA domain APY29_RS13070 ed0fd7ba407fd0fa5de2c2c4d8fd61a3 260 Gene3D G3DSA:3.40.50.300 1 259 5.0E-49 T 28-03-2018 APY29_RS13070 ed0fd7ba407fd0fa5de2c2c4d8fd61a3 260 SUPERFAMILY SSF52540 1 250 6.58E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS01750 5db2edee64de666fbbe5c0ea55c5dc16 902 Gene3D G3DSA:3.30.1490.20 509 573 1.1E-18 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APY29_RS01750 5db2edee64de666fbbe5c0ea55c5dc16 902 SUPERFAMILY SSF55729 743 879 5.66E-20 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS01750 5db2edee64de666fbbe5c0ea55c5dc16 902 Gene3D G3DSA:3.30.470.20 574 713 1.2E-32 T 28-03-2018 APY29_RS01750 5db2edee64de666fbbe5c0ea55c5dc16 902 Pfam PF13549 ATP-grasp domain 482 706 3.9E-75 T 28-03-2018 APY29_RS01750 5db2edee64de666fbbe5c0ea55c5dc16 902 Pfam PF13302 Acetyltransferase (GNAT) domain 743 877 6.5E-9 T 28-03-2018 IPR000182 GNAT domain GO:0008080 APY29_RS01750 5db2edee64de666fbbe5c0ea55c5dc16 902 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 152 289 5.4E-48 T 28-03-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain APY29_RS01750 5db2edee64de666fbbe5c0ea55c5dc16 902 Gene3D G3DSA:3.40.630.30 732 894 6.8E-22 T 28-03-2018 APY29_RS01750 5db2edee64de666fbbe5c0ea55c5dc16 902 Gene3D G3DSA:3.40.50.261 135 293 3.5E-35 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 APY29_RS01750 5db2edee64de666fbbe5c0ea55c5dc16 902 SUPERFAMILY SSF52210 297 453 1.96E-37 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 APY29_RS01750 5db2edee64de666fbbe5c0ea55c5dc16 902 SUPERFAMILY SSF51735 1 139 9.85E-29 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS01750 5db2edee64de666fbbe5c0ea55c5dc16 902 Gene3D G3DSA:3.40.50.261 294 460 4.4E-39 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 APY29_RS01750 5db2edee64de666fbbe5c0ea55c5dc16 902 SUPERFAMILY SSF56059 492 706 4.36E-30 T 28-03-2018 APY29_RS01750 5db2edee64de666fbbe5c0ea55c5dc16 902 SUPERFAMILY SSF52210 132 291 2.09E-36 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 APY29_RS01750 5db2edee64de666fbbe5c0ea55c5dc16 902 Pfam PF13380 CoA binding domain 14 135 3.7E-18 T 28-03-2018 IPR003781 CoA-binding GO:0048037 APY29_RS01750 5db2edee64de666fbbe5c0ea55c5dc16 902 SMART SM00881 9 104 8.0E-16 T 28-03-2018 IPR003781 CoA-binding GO:0048037 APY29_RS01750 5db2edee64de666fbbe5c0ea55c5dc16 902 Gene3D G3DSA:3.40.50.720 1 134 1.1E-31 T 28-03-2018 APY29_RS06935 702276047c0a11286c39af40e8006e57 347 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 11 135 5.7E-10 T 28-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 APY29_RS06935 702276047c0a11286c39af40e8006e57 347 Pfam PF00742 Homoserine dehydrogenase 147 342 6.4E-44 T 28-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 APY29_RS06935 702276047c0a11286c39af40e8006e57 347 SUPERFAMILY SSF51735 6 169 1.36E-23 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS06935 702276047c0a11286c39af40e8006e57 347 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 193 215 - T 28-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 APY29_RS06935 702276047c0a11286c39af40e8006e57 347 PIRSF PIRSF036497 2 347 7.3E-94 T 28-03-2018 IPR022697 Homoserine dehydrogenase lacking ACT domain GO:0004412 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 APY29_RS06935 702276047c0a11286c39af40e8006e57 347 SUPERFAMILY SSF55347 147 329 2.16E-41 T 28-03-2018 APY29_RS06935 702276047c0a11286c39af40e8006e57 347 Gene3D G3DSA:3.40.50.720 2 168 3.6E-23 T 28-03-2018 APY29_RS06935 702276047c0a11286c39af40e8006e57 347 Gene3D G3DSA:3.30.360.10 169 325 1.4E-46 T 28-03-2018 APY29_RS12760 8b16cab7c5e81ad54bc11cab8aec899e 210 Pfam PF00072 Response regulator receiver domain 3 114 5.0E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS12760 8b16cab7c5e81ad54bc11cab8aec899e 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 4.1E-17 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS12760 8b16cab7c5e81ad54bc11cab8aec899e 210 SUPERFAMILY SSF46894 139 206 5.78E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS12760 8b16cab7c5e81ad54bc11cab8aec899e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.5E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS12760 8b16cab7c5e81ad54bc11cab8aec899e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.5E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS12760 8b16cab7c5e81ad54bc11cab8aec899e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.5E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS12760 8b16cab7c5e81ad54bc11cab8aec899e 210 Gene3D G3DSA:1.10.10.10 125 207 2.0E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS12760 8b16cab7c5e81ad54bc11cab8aec899e 210 SMART SM00421 145 202 2.4E-21 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS12760 8b16cab7c5e81ad54bc11cab8aec899e 210 SUPERFAMILY SSF52172 2 130 3.7E-31 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS12760 8b16cab7c5e81ad54bc11cab8aec899e 210 Gene3D G3DSA:3.40.50.2300 1 124 1.9E-31 T 28-03-2018 APY29_RS12760 8b16cab7c5e81ad54bc11cab8aec899e 210 SMART SM00448 1 114 1.6E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS10725 556bc58c9be61030acda659f08d5259d 316 Pfam PF00248 Aldo/keto reductase family 48 250 1.1E-36 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS10725 556bc58c9be61030acda659f08d5259d 316 Pfam PF00248 Aldo/keto reductase family 257 315 3.4E-11 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS10725 556bc58c9be61030acda659f08d5259d 316 SUPERFAMILY SSF51430 41 315 1.18E-64 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS10725 556bc58c9be61030acda659f08d5259d 316 Gene3D G3DSA:3.20.20.100 39 316 9.2E-64 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS10725 556bc58c9be61030acda659f08d5259d 316 PRINTS PR00069 Aldo-keto reductase signature 181 198 3.0E-11 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APY29_RS10725 556bc58c9be61030acda659f08d5259d 316 PRINTS PR00069 Aldo-keto reductase signature 252 276 3.0E-11 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APY29_RS10725 556bc58c9be61030acda659f08d5259d 316 PRINTS PR00069 Aldo-keto reductase signature 78 102 3.0E-11 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APY29_RS09250 c5c9af39122d4a3c4d0b3da72742550e 218 SMART SM00507 111 164 1.5E-9 T 28-03-2018 IPR003615 HNH nuclease APY29_RS09250 c5c9af39122d4a3c4d0b3da72742550e 218 Gene3D G3DSA:3.40.1800.10 109 179 9.3E-19 T 28-03-2018 APY29_RS09250 c5c9af39122d4a3c4d0b3da72742550e 218 Pfam PF14279 HNH endonuclease 124 178 1.7E-16 T 28-03-2018 IPR029471 HNH endonuclease 5 APY29_RS10545 8f01e704d007696c383e684cd7741c1d 992 Gene3D G3DSA:2.40.170.20 290 992 1.1E-56 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS10545 8f01e704d007696c383e684cd7741c1d 992 Pfam PF13620 Carboxypeptidase regulatory-like domain 39 113 9.8E-11 T 28-03-2018 APY29_RS10545 8f01e704d007696c383e684cd7741c1d 992 Pfam PF00593 TonB dependent receptor 377 988 2.1E-17 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS10545 8f01e704d007696c383e684cd7741c1d 992 SUPERFAMILY SSF49452 32 113 1.14E-7 T 28-03-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 APY29_RS10545 8f01e704d007696c383e684cd7741c1d 992 Gene3D G3DSA:2.60.40.1120 32 116 3.2E-11 T 28-03-2018 APY29_RS10545 8f01e704d007696c383e684cd7741c1d 992 Gene3D G3DSA:2.170.130.10 122 261 1.4E-6 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS10545 8f01e704d007696c383e684cd7741c1d 992 SUPERFAMILY SSF56935 793 990 8.06E-58 T 28-03-2018 APY29_RS10545 8f01e704d007696c383e684cd7741c1d 992 SUPERFAMILY SSF56935 121 589 8.06E-58 T 28-03-2018 APY29_RS10545 8f01e704d007696c383e684cd7741c1d 992 SUPERFAMILY SSF56935 719 766 8.06E-58 T 28-03-2018 APY29_RS10545 8f01e704d007696c383e684cd7741c1d 992 SUPERFAMILY SSF56935 618 659 8.06E-58 T 28-03-2018 APY29_RS06795 9d5c48ec5e209dda4d8627ca223f20c4 153 Pfam PF16200 C-terminal region of band_7 78 138 4.1E-8 T 28-03-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 APY29_RS02585 f93cf0ba5de0e789a0c5b77c87ea7fba 219 SUPERFAMILY SSF53271 5 211 1.1E-43 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like APY29_RS02585 f93cf0ba5de0e789a0c5b77c87ea7fba 219 Gene3D G3DSA:3.40.50.2020 1 195 9.8E-46 T 28-03-2018 APY29_RS02585 f93cf0ba5de0e789a0c5b77c87ea7fba 219 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 219 31.439 T 28-03-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APY29_RS02585 f93cf0ba5de0e789a0c5b77c87ea7fba 219 Pfam PF00156 Phosphoribosyl transferase domain 48 158 8.6E-15 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 APY29_RS02585 f93cf0ba5de0e789a0c5b77c87ea7fba 219 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 188 2.0E-56 T 28-03-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APY29_RS04985 9c368049209bec0540db2a4d0c841ed3 372 SUPERFAMILY SSF53686 20 313 1.83E-78 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APY29_RS04985 9c368049209bec0540db2a4d0c841ed3 372 Gene3D G3DSA:3.40.50.1100 147 320 1.7E-34 T 28-03-2018 APY29_RS04985 9c368049209bec0540db2a4d0c841ed3 372 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 36 298 4.5E-72 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APY29_RS04985 9c368049209bec0540db2a4d0c841ed3 372 Gene3D G3DSA:3.40.50.1100 42 146 7.2E-30 T 28-03-2018 APY29_RS03990 b09045e79f22062b4eb2fb3a85b6b9c4 600 ProSitePatterns PS00080 Multicopper oxidases signature 2. 581 592 - T 28-03-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 APY29_RS03990 b09045e79f22062b4eb2fb3a85b6b9c4 600 ProSitePatterns PS00079 Multicopper oxidases signature 1. 154 174 - T 28-03-2018 IPR033138 Multicopper oxidases, conserved site APY29_RS03990 b09045e79f22062b4eb2fb3a85b6b9c4 600 Pfam PF00394 Multicopper oxidase 189 366 3.3E-31 T 28-03-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 APY29_RS03990 b09045e79f22062b4eb2fb3a85b6b9c4 600 SUPERFAMILY SSF49503 70 210 5.12E-39 T 28-03-2018 IPR008972 Cupredoxin APY29_RS03990 b09045e79f22062b4eb2fb3a85b6b9c4 600 Pfam PF07732 Multicopper oxidase 71 178 1.9E-39 T 28-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 APY29_RS03990 b09045e79f22062b4eb2fb3a85b6b9c4 600 SUPERFAMILY SSF49503 183 401 1.3E-54 T 28-03-2018 IPR008972 Cupredoxin APY29_RS03990 b09045e79f22062b4eb2fb3a85b6b9c4 600 ProSitePatterns PS00079 Multicopper oxidases signature 1. 576 596 - T 28-03-2018 IPR033138 Multicopper oxidases, conserved site APY29_RS03990 b09045e79f22062b4eb2fb3a85b6b9c4 600 Gene3D G3DSA:2.60.40.420 390 599 1.2E-44 T 28-03-2018 IPR008972 Cupredoxin APY29_RS03990 b09045e79f22062b4eb2fb3a85b6b9c4 600 Gene3D G3DSA:2.60.40.420 184 389 3.2E-37 T 28-03-2018 IPR008972 Cupredoxin APY29_RS03990 b09045e79f22062b4eb2fb3a85b6b9c4 600 Pfam PF07731 Multicopper oxidase 488 599 2.0E-26 T 28-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 APY29_RS03990 b09045e79f22062b4eb2fb3a85b6b9c4 600 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 21 599 1.6E-298 T 28-03-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 APY29_RS03990 b09045e79f22062b4eb2fb3a85b6b9c4 600 SUPERFAMILY SSF49503 449 598 7.42E-36 T 28-03-2018 IPR008972 Cupredoxin APY29_RS03990 b09045e79f22062b4eb2fb3a85b6b9c4 600 Gene3D G3DSA:2.60.40.420 45 177 4.1E-31 T 28-03-2018 IPR008972 Cupredoxin APY29_RS23475 66e68a40c51757cb442932f11d6bdd8f 232 SUPERFAMILY SSF101327 13 162 2.09E-29 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 APY29_RS23475 66e68a40c51757cb442932f11d6bdd8f 232 Pfam PF03695 Uncharacterised protein family (UPF0149) 15 188 7.2E-32 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 APY29_RS23475 66e68a40c51757cb442932f11d6bdd8f 232 Pfam PF02810 SEC-C motif 208 225 2.1E-10 T 28-03-2018 IPR004027 SEC-C motif APY29_RS23475 66e68a40c51757cb442932f11d6bdd8f 232 SUPERFAMILY SSF103642 206 225 2.29E-7 T 28-03-2018 APY29_RS23475 66e68a40c51757cb442932f11d6bdd8f 232 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 13 187 1.3E-58 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 APY29_RS23475 66e68a40c51757cb442932f11d6bdd8f 232 Gene3D G3DSA:3.10.450.50 104 227 5.0E-13 T 28-03-2018 APY29_RS07975 7f0150773a169c9ade486eb2504eb009 606 SUPERFAMILY SSF49785 506 606 6.8E-16 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS07975 7f0150773a169c9ade486eb2504eb009 606 Gene3D G3DSA:2.60.120.260 482 606 1.6E-17 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS07975 7f0150773a169c9ade486eb2504eb009 606 Pfam PF01483 Proprotein convertase P-domain 517 602 2.8E-14 T 28-03-2018 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 APY29_RS07975 7f0150773a169c9ade486eb2504eb009 606 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 93 104 - T 28-03-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site APY29_RS07975 7f0150773a169c9ade486eb2504eb009 606 Pfam PF00082 Subtilase family 373 463 7.8E-11 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS07975 7f0150773a169c9ade486eb2504eb009 606 Pfam PF00082 Subtilase family 88 305 7.4E-21 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS07975 7f0150773a169c9ade486eb2504eb009 606 SUPERFAMILY SSF52743 46 314 1.96E-70 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS07975 7f0150773a169c9ade486eb2504eb009 606 SUPERFAMILY SSF52743 384 476 1.96E-70 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS07975 7f0150773a169c9ade486eb2504eb009 606 SUPERFAMILY SSF52743 348 355 1.96E-70 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS07975 7f0150773a169c9ade486eb2504eb009 606 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 137 147 - T 28-03-2018 IPR022398 Peptidase S8, subtilisin, His-active site APY29_RS07975 7f0150773a169c9ade486eb2504eb009 606 PRINTS PR00723 Subtilisin serine protease family (S8) signature 390 406 9.8E-18 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS07975 7f0150773a169c9ade486eb2504eb009 606 PRINTS PR00723 Subtilisin serine protease family (S8) signature 88 107 9.8E-18 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS07975 7f0150773a169c9ade486eb2504eb009 606 PRINTS PR00723 Subtilisin serine protease family (S8) signature 133 146 9.8E-18 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS07975 7f0150773a169c9ade486eb2504eb009 606 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 391 401 - T 28-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site APY29_RS07975 7f0150773a169c9ade486eb2504eb009 606 Gene3D G3DSA:3.40.50.200 36 479 8.9E-67 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS16270 f9313d3bfef7a7ecab8545490f23ae0f 157 Pfam PF00805 Pentapeptide repeats (8 copies) 64 101 2.9E-8 T 28-03-2018 IPR001646 Pentapeptide repeat APY29_RS16270 f9313d3bfef7a7ecab8545490f23ae0f 157 SUPERFAMILY SSF141571 19 146 7.46E-28 T 28-03-2018 APY29_RS16270 f9313d3bfef7a7ecab8545490f23ae0f 157 Gene3D G3DSA:2.160.10.20 76 146 3.3E-14 T 28-03-2018 APY29_RS16270 f9313d3bfef7a7ecab8545490f23ae0f 157 Gene3D G3DSA:2.160.10.20 12 75 1.4E-13 T 28-03-2018 APY29_RS13895 81785a5b9d4c7b19720f9c8ba3a5cec0 160 Gene3D G3DSA:3.40.30.10 5 159 5.1E-32 T 28-03-2018 APY29_RS13895 81785a5b9d4c7b19720f9c8ba3a5cec0 160 Pfam PF00578 AhpC/TSA family 10 135 2.8E-33 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 APY29_RS13895 81785a5b9d4c7b19720f9c8ba3a5cec0 160 SUPERFAMILY SSF52833 14 157 1.26E-46 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS18890 327949bb5836ecea9231893d36e5c7e1 345 Pfam PF13387 Domain of unknown function (DUF4105) 128 275 1.5E-44 T 28-03-2018 IPR025178 Domain of unknown function DUF4105 APY29_RS07305 946017e70bdc354bd55c72b668c15182 186 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 22 161 2.2E-40 T 28-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 APY29_RS07305 946017e70bdc354bd55c72b668c15182 186 Gene3D G3DSA:2.60.450.10 22 158 1.4E-22 T 28-03-2018 APY29_RS07305 946017e70bdc354bd55c72b668c15182 186 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 3 161 23.482 T 28-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 APY29_RS07305 946017e70bdc354bd55c72b668c15182 186 Pfam PF03968 OstA-like protein 34 143 1.2E-25 T 28-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal APY29_RS05435 3aee60d4d368d8f90d94592557f9ae1d 521 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 165 4.0E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS05435 3aee60d4d368d8f90d94592557f9ae1d 521 Gene3D G3DSA:2.170.130.10 25 170 1.1E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS05435 3aee60d4d368d8f90d94592557f9ae1d 521 SUPERFAMILY SSF56935 276 496 5.49E-29 T 28-03-2018 APY29_RS05435 3aee60d4d368d8f90d94592557f9ae1d 521 SUPERFAMILY SSF56935 27 238 5.49E-29 T 28-03-2018 APY29_RS08370 a3d58866e1a7c1d26312af6516392967 291 Gene3D G3DSA:1.10.600.10 2 291 2.7E-82 T 28-03-2018 IPR008949 Isoprenoid synthase domain APY29_RS08370 a3d58866e1a7c1d26312af6516392967 291 Pfam PF00348 Polyprenyl synthetase 29 257 9.6E-57 T 28-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 APY29_RS08370 a3d58866e1a7c1d26312af6516392967 291 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 80 96 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site APY29_RS08370 a3d58866e1a7c1d26312af6516392967 291 SUPERFAMILY SSF48576 6 278 5.12E-83 T 28-03-2018 IPR008949 Isoprenoid synthase domain APY29_RS08370 a3d58866e1a7c1d26312af6516392967 291 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 210 222 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site APY29_RS20725 6d030d2a15e916940896e6903146da24 491 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 27 484 2.6E-166 T 28-03-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 APY29_RS20725 6d030d2a15e916940896e6903146da24 491 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 170 1.3E-29 T 28-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 APY29_RS20725 6d030d2a15e916940896e6903146da24 491 SUPERFAMILY SSF56322 16 484 3.01E-156 T 28-03-2018 IPR005801 ADC synthase GO:0009058 APY29_RS20725 6d030d2a15e916940896e6903146da24 491 Pfam PF00425 chorismate binding enzyme 223 476 2.6E-97 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal APY29_RS20725 6d030d2a15e916940896e6903146da24 491 PRINTS PR00095 Anthranilate synthase component I signature 433 447 1.4E-22 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 APY29_RS20725 6d030d2a15e916940896e6903146da24 491 PRINTS PR00095 Anthranilate synthase component I signature 338 351 1.4E-22 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 APY29_RS20725 6d030d2a15e916940896e6903146da24 491 PRINTS PR00095 Anthranilate synthase component I signature 324 337 1.4E-22 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 APY29_RS20725 6d030d2a15e916940896e6903146da24 491 PRINTS PR00095 Anthranilate synthase component I signature 418 432 1.4E-22 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 APY29_RS20725 6d030d2a15e916940896e6903146da24 491 Gene3D G3DSA:3.60.120.10 14 486 2.0E-166 T 28-03-2018 IPR005801 ADC synthase GO:0009058 APY29_RS01785 52aecc54318c35a7d8c9e08100054cde 160 SUPERFAMILY SSF52218 1 153 4.57E-23 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS01785 52aecc54318c35a7d8c9e08100054cde 160 Gene3D G3DSA:3.40.50.360 1 160 2.3E-19 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS01785 52aecc54318c35a7d8c9e08100054cde 160 TIGRFAM TIGR01754 flav_RNR: putative ribonucleotide reductase-associated flavodoxin 1 144 2.0E-56 T 28-03-2018 IPR010088 Ribonucleotide reductase-associated flavodoxin, putative APY29_RS01785 52aecc54318c35a7d8c9e08100054cde 160 Pfam PF00258 Flavodoxin 8 114 6.4E-7 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APY29_RS02980 8c9b534f6c7bce343d8135c8edee3508 740 Hamap MF_00983 Probable primosomal protein N' [priA]. 10 739 23.662 T 28-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 APY29_RS02980 8c9b534f6c7bce343d8135c8edee3508 740 SMART SM00487 195 391 2.1E-21 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APY29_RS02980 8c9b534f6c7bce343d8135c8edee3508 740 Pfam PF00271 Helicase conserved C-terminal domain 506 591 2.0E-6 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS02980 8c9b534f6c7bce343d8135c8edee3508 740 SUPERFAMILY SSF52540 464 613 2.57E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS02980 8c9b534f6c7bce343d8135c8edee3508 740 SMART SM00490 496 592 3.9E-9 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS02980 8c9b534f6c7bce343d8135c8edee3508 740 Gene3D G3DSA:3.40.50.300 399 633 8.7E-20 T 28-03-2018 APY29_RS02980 8c9b534f6c7bce343d8135c8edee3508 740 TIGRFAM TIGR00595 priA: primosomal protein N' 220 737 2.6E-173 T 28-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 APY29_RS02980 8c9b534f6c7bce343d8135c8edee3508 740 Gene3D G3DSA:3.40.50.300 191 384 8.0E-28 T 28-03-2018 APY29_RS02980 8c9b534f6c7bce343d8135c8edee3508 740 Pfam PF00270 DEAD/DEAH box helicase 207 362 7.7E-13 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APY29_RS02980 8c9b534f6c7bce343d8135c8edee3508 740 SUPERFAMILY SSF52540 197 375 2.79E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS10435 e0b8303962c4734c1dc60abf482f0e4d 561 SMART SM00382 368 560 1.8E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS10435 e0b8303962c4734c1dc60abf482f0e4d 561 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS10435 e0b8303962c4734c1dc60abf482f0e4d 561 Gene3D G3DSA:3.40.50.300 328 556 8.6E-50 T 28-03-2018 APY29_RS10435 e0b8303962c4734c1dc60abf482f0e4d 561 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 8 536 2.0E-120 T 28-03-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 APY29_RS10435 e0b8303962c4734c1dc60abf482f0e4d 561 SUPERFAMILY SSF52540 335 553 5.33E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS10435 e0b8303962c4734c1dc60abf482f0e4d 561 Gene3D G3DSA:1.20.1560.10 2 326 8.1E-25 T 28-03-2018 APY29_RS10435 e0b8303962c4734c1dc60abf482f0e4d 561 SUPERFAMILY SSF90123 8 329 2.22E-31 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS10435 e0b8303962c4734c1dc60abf482f0e4d 561 Pfam PF00664 ABC transporter transmembrane region 65 232 7.3E-7 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS10435 e0b8303962c4734c1dc60abf482f0e4d 561 Pfam PF00005 ABC transporter 359 506 1.9E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS15615 1bf165460f81d722c562f0682b78db83 258 SUPERFAMILY SSF55920 5 250 7.46E-96 T 28-03-2018 IPR000994 Peptidase M24 APY29_RS15615 1bf165460f81d722c562f0682b78db83 258 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 42.415 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 APY29_RS15615 1bf165460f81d722c562f0682b78db83 258 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 APY29_RS15615 1bf165460f81d722c562f0682b78db83 258 Gene3D G3DSA:3.90.230.10 2 258 4.5E-91 T 28-03-2018 APY29_RS15615 1bf165460f81d722c562f0682b78db83 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 4.7E-23 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 APY29_RS15615 1bf165460f81d722c562f0682b78db83 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 4.7E-23 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 APY29_RS15615 1bf165460f81d722c562f0682b78db83 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 4.7E-23 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 APY29_RS15615 1bf165460f81d722c562f0682b78db83 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 4.7E-23 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 APY29_RS15615 1bf165460f81d722c562f0682b78db83 258 Pfam PF00557 Metallopeptidase family M24 12 242 1.7E-56 T 28-03-2018 IPR000994 Peptidase M24 APY29_RS15615 1bf165460f81d722c562f0682b78db83 258 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 250 3.2E-100 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 APY29_RS17095 9c46349bd30f4f0b322bd41b4ac7211a 101 Gene3D G3DSA:3.30.40.10 1 88 2.1E-20 T 28-03-2018 IPR013083 Zinc finger, RING/FYVE/PHD-type APY29_RS17095 9c46349bd30f4f0b322bd41b4ac7211a 101 SUPERFAMILY SSF57850 3 94 1.88E-28 T 28-03-2018 APY29_RS17095 9c46349bd30f4f0b322bd41b4ac7211a 101 Pfam PF02148 Zn-finger in ubiquitin-hydrolases and other protein 21 87 2.4E-10 T 28-03-2018 IPR001607 Zinc finger, UBP-type GO:0008270 APY29_RS03810 0d215e06e3f301351d6e48c3b670643e 228 Gene3D G3DSA:2.40.160.20 20 228 9.3E-23 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APY29_RS03810 0d215e06e3f301351d6e48c3b670643e 228 Pfam PF03922 OmpW family 70 228 3.1E-38 T 28-03-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 APY29_RS03810 0d215e06e3f301351d6e48c3b670643e 228 SUPERFAMILY SSF56925 56 228 1.39E-18 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APY29_RS00015 a82328b2d0b75d492ccc5e28d718512e 368 ProSitePatterns PS00618 RecF protein signature 2. 304 322 - T 28-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 APY29_RS00015 a82328b2d0b75d492ccc5e28d718512e 368 ProSitePatterns PS00617 RecF protein signature 1. 121 141 - T 28-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 APY29_RS00015 a82328b2d0b75d492ccc5e28d718512e 368 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 368 82.801 T 28-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APY29_RS00015 a82328b2d0b75d492ccc5e28d718512e 368 SUPERFAMILY SSF52540 1 337 1.68E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS00015 a82328b2d0b75d492ccc5e28d718512e 368 Gene3D G3DSA:3.40.50.300 1 364 1.1E-25 T 28-03-2018 APY29_RS00015 a82328b2d0b75d492ccc5e28d718512e 368 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 357 1.7E-17 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal APY29_RS00015 a82328b2d0b75d492ccc5e28d718512e 368 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 360 2.1E-75 T 28-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APY29_RS09310 761081e43cbb70720ab01580929fa5ef 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.363 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 APY29_RS09310 761081e43cbb70720ab01580929fa5ef 91 SUPERFAMILY SSF111148 1 88 1.44E-36 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 APY29_RS09310 761081e43cbb70720ab01580929fa5ef 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 5.3E-40 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 APY29_RS09310 761081e43cbb70720ab01580929fa5ef 91 Gene3D G3DSA:1.10.3880.10 2 89 2.1E-37 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 APY29_RS09310 761081e43cbb70720ab01580929fa5ef 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 77 5.0E-41 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 APY29_RS09310 761081e43cbb70720ab01580929fa5ef 91 PIRSF PIRSF029827 1 90 7.5E-41 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 APY29_RS04655 40968f93d43e35409129331e28189412 542 PIRSF PIRSF011794 12 541 1.7E-230 T 28-03-2018 IPR016590 Rhamnogalacturonase B GO:0005975|GO:0016837 MetaCyc: PWY-6769|MetaCyc: PWY-6771 APY29_RS04655 40968f93d43e35409129331e28189412 542 SUPERFAMILY SSF49452 284 363 2.35E-11 T 28-03-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 APY29_RS04655 40968f93d43e35409129331e28189412 542 SUPERFAMILY SSF74650 35 280 3.77E-83 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APY29_RS04655 40968f93d43e35409129331e28189412 542 Pfam PF14686 Polysaccharide lyase family 4, domain II 291 361 5.8E-16 T 28-03-2018 IPR029413 Rhamnogalacturonan lyase, domain II APY29_RS04655 40968f93d43e35409129331e28189412 542 Gene3D G3DSA:2.60.120.260 370 541 3.2E-43 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS04655 40968f93d43e35409129331e28189412 542 Pfam PF09284 Rhamnogalacturonan lyase B, N-terminal 36 283 2.8E-87 T 28-03-2018 IPR015364 Rhamnogalacturonase B, N-terminal GO:0005975|GO:0016837|GO:0030246 MetaCyc: PWY-6769|MetaCyc: PWY-6771 APY29_RS04655 40968f93d43e35409129331e28189412 542 Pfam PF14683 Polysaccharide lyase family 4, domain III 376 539 4.6E-36 T 28-03-2018 IPR029411 Rhamnogalacturonan lyase, domain III APY29_RS04655 40968f93d43e35409129331e28189412 542 Gene3D G3DSA:2.70.98.10 35 284 3.8E-57 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 APY29_RS04655 40968f93d43e35409129331e28189412 542 SUPERFAMILY SSF49785 372 540 6.8E-56 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS04655 40968f93d43e35409129331e28189412 542 Gene3D G3DSA:2.60.40.1120 285 369 5.8E-11 T 28-03-2018 APY29_RS04655 40968f93d43e35409129331e28189412 542 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 107 - T 28-03-2018 IPR010916 TonB box, conserved site APY29_RS13065 798eca839c6f04de515d0f4eb3a763c6 324 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 57 1.8E-22 T 28-03-2018 IPR025713 Motility protein B, N-terminal domain APY29_RS13065 798eca839c6f04de515d0f4eb3a763c6 324 Pfam PF00691 OmpA family 167 265 6.2E-17 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS13065 798eca839c6f04de515d0f4eb3a763c6 324 Gene3D G3DSA:3.30.1330.60 114 291 7.9E-40 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS13065 798eca839c6f04de515d0f4eb3a763c6 324 SUPERFAMILY SSF103088 142 271 1.23E-30 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS23330 c47412c454173b60588db957f690f041 285 ProSitePatterns PS01157 Class A bacterial acid phosphatases signature. 173 180 - T 28-03-2018 IPR018296 Acid phosphatase, class A, bacterial, conserved site GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 APY29_RS23330 c47412c454173b60588db957f690f041 285 PRINTS PR00483 Bacterial acid phosphatase class A signature 201 225 1.1E-37 T 28-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 APY29_RS23330 c47412c454173b60588db957f690f041 285 PRINTS PR00483 Bacterial acid phosphatase class A signature 143 161 1.1E-37 T 28-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 APY29_RS23330 c47412c454173b60588db957f690f041 285 PRINTS PR00483 Bacterial acid phosphatase class A signature 235 253 1.1E-37 T 28-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 APY29_RS23330 c47412c454173b60588db957f690f041 285 PRINTS PR00483 Bacterial acid phosphatase class A signature 79 98 1.1E-37 T 28-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 APY29_RS23330 c47412c454173b60588db957f690f041 285 PRINTS PR00483 Bacterial acid phosphatase class A signature 169 195 1.1E-37 T 28-03-2018 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 APY29_RS23330 c47412c454173b60588db957f690f041 285 PIRSF PIRSF000897 9 276 1.1E-116 T 28-03-2018 IPR011158 Nonspecific acid phosphatase, class A GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 APY29_RS23330 c47412c454173b60588db957f690f041 285 SMART SM00014 125 238 6.6E-18 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APY29_RS23330 c47412c454173b60588db957f690f041 285 SUPERFAMILY SSF48317 45 257 1.01E-47 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APY29_RS23330 c47412c454173b60588db957f690f041 285 Pfam PF01569 PAP2 superfamily 136 240 1.1E-17 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APY29_RS23330 c47412c454173b60588db957f690f041 285 Gene3D G3DSA:1.20.144.10 31 260 4.5E-44 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 799 830 5.2E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 1003 1034 4.2E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 561 592 4.2E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 493 524 1.4E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 1073 1097 0.05 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 867 898 3.3E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 697 728 1.4E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 391 422 5.7E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 1037 1066 2.8E-10 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 289 320 3.3E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 425 456 5.2E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 459 490 5.2E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 663 694 4.2E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 901 932 7.7E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 595 626 1.4E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 357 388 1.4E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 969 1000 5.2E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 731 762 3.3E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 629 660 3.3E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 323 354 9.4E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 527 558 5.7E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 935 966 1.4E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 833 864 2.4E-15 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Pfam PF03377 TAL effector repeat 765 796 1.7E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.40.47.10 817 860 0.044 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.10.20.90 716 748 0.028 T 28-03-2018 APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.10.20.90 375 409 0.24 T 28-03-2018 APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.10.20.90 512 546 0.27 T 28-03-2018 APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.10.20.90 988 1021 0.049 T 28-03-2018 APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.10.20.90 547 579 0.055 T 28-03-2018 APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.10.20.90 341 374 0.056 T 28-03-2018 APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.10.20.90 886 919 0.077 T 28-03-2018 APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.10.20.90 477 511 0.054 T 28-03-2018 APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.10.20.90 783 816 0.45 T 28-03-2018 APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.10.20.90 305 340 0.11 T 28-03-2018 APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.10.20.90 749 782 0.09 T 28-03-2018 APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.10.20.90 615 648 0.035 T 28-03-2018 APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.10.20.90 920 953 0.062 T 28-03-2018 APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.10.20.90 1022 1064 0.43 T 28-03-2018 APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.10.20.90 683 715 0.051 T 28-03-2018 APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.10.20.90 954 987 0.067 T 28-03-2018 APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.10.20.90 861 885 0.031 T 28-03-2018 APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.10.20.90 443 476 0.43 T 28-03-2018 APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.10.20.90 580 614 0.062 T 28-03-2018 APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.10.20.90 410 442 0.5 T 28-03-2018 APY29_RS23530 c2ad734eeee38272b6defc117880eea0 1334 Gene3D G3DSA:3.10.20.90 649 682 0.045 T 28-03-2018 APY29_RS05480 993339691c367b7c5ab2b2bc494b92a8 274 Gene3D G3DSA:3.60.15.10 1 271 3.3E-49 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS05480 993339691c367b7c5ab2b2bc494b92a8 274 Pfam PF00753 Metallo-beta-lactamase superfamily 13 205 7.5E-20 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS05480 993339691c367b7c5ab2b2bc494b92a8 274 SUPERFAMILY SSF56281 10 250 3.5E-49 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS05480 993339691c367b7c5ab2b2bc494b92a8 274 SMART SM00849 14 205 9.2E-26 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS09110 b5aa576b98d1d5e292a5ff9fb685cd9b 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.741 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APY29_RS09110 b5aa576b98d1d5e292a5ff9fb685cd9b 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 9.7E-26 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APY29_RS09110 b5aa576b98d1d5e292a5ff9fb685cd9b 65 SUPERFAMILY SSF143034 2 64 3.4E-23 T 28-03-2018 APY29_RS09110 b5aa576b98d1d5e292a5ff9fb685cd9b 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 28-03-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS09110 b5aa576b98d1d5e292a5ff9fb685cd9b 65 Pfam PF01632 Ribosomal protein L35 2 62 9.9E-25 T 28-03-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS09110 b5aa576b98d1d5e292a5ff9fb685cd9b 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 2.9E-18 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APY29_RS09110 b5aa576b98d1d5e292a5ff9fb685cd9b 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.9E-18 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APY29_RS09110 b5aa576b98d1d5e292a5ff9fb685cd9b 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 2.9E-18 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APY29_RS16465 acc05e8fb38a9ce4bceec4e1efca0a97 131 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 128 1.1E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16465 acc05e8fb38a9ce4bceec4e1efca0a97 131 Gene3D G3DSA:3.30.565.10 2 129 4.6E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16465 acc05e8fb38a9ce4bceec4e1efca0a97 131 SUPERFAMILY SSF55874 26 128 3.97E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS13080 67273cc41d9556081010186ff9eb4c59 102 Gene3D G3DSA:3.30.750.24 1 102 1.5E-7 T 28-03-2018 IPR002645 STAS domain APY29_RS13080 67273cc41d9556081010186ff9eb4c59 102 SUPERFAMILY SSF52091 3 88 1.45E-10 T 28-03-2018 IPR002645 STAS domain APY29_RS13080 67273cc41d9556081010186ff9eb4c59 102 Pfam PF13466 STAS domain 4 82 2.0E-13 T 28-03-2018 IPR002645 STAS domain APY29_RS18930 1593bf596005e84c6b552611139f0f90 185 Pfam PF11539 Protein of unknown function (DUF3228) 3 183 1.8E-61 T 28-03-2018 IPR021610 Protein of unknown function DUF3228 APY29_RS11295 f57ab1b25c06d7cfb5973d62f3758a72 379 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 61 287 1.5E-37 T 28-03-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 APY29_RS15820 467a9c38c16173cf5aaeef430fd6713e 1198 Gene3D G3DSA:1.10.390.10 920 1082 1.0E-17 T 28-03-2018 APY29_RS15820 467a9c38c16173cf5aaeef430fd6713e 1198 Pfam PF01433 Peptidase family M1 domain 849 1067 6.0E-15 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APY29_RS15820 467a9c38c16173cf5aaeef430fd6713e 1198 Pfam PF12679 ABC-2 family transporter protein 6 261 8.5E-12 T 28-03-2018 IPR032688 ABC-2 family transporter protein GO:0006810 APY29_RS15820 467a9c38c16173cf5aaeef430fd6713e 1198 SUPERFAMILY SSF55486 848 1080 1.22E-20 T 28-03-2018 APY29_RS02305 19729a49b61c5ec700e566f762ca2742 478 Gene3D G3DSA:2.30.42.10 394 476 3.5E-8 T 28-03-2018 APY29_RS02305 19729a49b61c5ec700e566f762ca2742 478 SUPERFAMILY SSF50156 397 474 3.29E-8 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS02305 19729a49b61c5ec700e566f762ca2742 478 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 61 473 9.4E-127 T 28-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 APY29_RS02305 19729a49b61c5ec700e566f762ca2742 478 Gene3D G3DSA:2.40.10.10 183 289 1.2E-36 T 28-03-2018 APY29_RS02305 19729a49b61c5ec700e566f762ca2742 478 Gene3D G3DSA:2.30.42.10 290 390 5.0E-23 T 28-03-2018 APY29_RS02305 19729a49b61c5ec700e566f762ca2742 478 SMART SM00228 394 470 0.33 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS02305 19729a49b61c5ec700e566f762ca2742 478 SMART SM00228 288 370 5.7E-13 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS02305 19729a49b61c5ec700e566f762ca2742 478 SUPERFAMILY SSF50156 287 381 2.1E-20 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS02305 19729a49b61c5ec700e566f762ca2742 478 Pfam PF13365 Trypsin-like peptidase domain 111 246 3.3E-32 T 28-03-2018 APY29_RS02305 19729a49b61c5ec700e566f762ca2742 478 PRINTS PR00834 HtrA/DegQ protease family signature 328 340 5.1E-52 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APY29_RS02305 19729a49b61c5ec700e566f762ca2742 478 PRINTS PR00834 HtrA/DegQ protease family signature 239 256 5.1E-52 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APY29_RS02305 19729a49b61c5ec700e566f762ca2742 478 PRINTS PR00834 HtrA/DegQ protease family signature 142 162 5.1E-52 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APY29_RS02305 19729a49b61c5ec700e566f762ca2742 478 PRINTS PR00834 HtrA/DegQ protease family signature 217 234 5.1E-52 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APY29_RS02305 19729a49b61c5ec700e566f762ca2742 478 PRINTS PR00834 HtrA/DegQ protease family signature 182 206 5.1E-52 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APY29_RS02305 19729a49b61c5ec700e566f762ca2742 478 PRINTS PR00834 HtrA/DegQ protease family signature 121 133 5.1E-52 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APY29_RS02305 19729a49b61c5ec700e566f762ca2742 478 Pfam PF13180 PDZ domain 290 379 2.8E-12 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS02305 19729a49b61c5ec700e566f762ca2742 478 SUPERFAMILY SSF50494 59 284 5.48E-63 T 28-03-2018 IPR009003 Peptidase S1, PA clan APY29_RS02305 19729a49b61c5ec700e566f762ca2742 478 Gene3D G3DSA:2.40.10.10 58 182 5.3E-34 T 28-03-2018 APY29_RS09010 fea6d2d97e5168d0a299237a5f78a7cf 817 SMART SM00382 437 702 0.0054 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS09010 fea6d2d97e5168d0a299237a5f78a7cf 817 TIGRFAM TIGR00929 VirB4_CagE: type IV secretion/conjugal transfer ATPase, VirB4 family 6 798 2.0E-220 T 28-03-2018 IPR004346 CagE, TrbE, VirB component of type IV transporter system GO:0005524 APY29_RS09010 fea6d2d97e5168d0a299237a5f78a7cf 817 SUPERFAMILY SSF52540 385 727 4.39E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS09010 fea6d2d97e5168d0a299237a5f78a7cf 817 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 171 376 1.1E-48 T 28-03-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 APY29_RS09010 fea6d2d97e5168d0a299237a5f78a7cf 817 Gene3D G3DSA:3.40.50.300 352 769 1.7E-16 T 28-03-2018 APY29_RS17495 a026248b73d0d9e9df2be971d0386fe3 148 Pfam PF02391 MoaE protein 14 125 4.7E-35 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 APY29_RS17495 a026248b73d0d9e9df2be971d0386fe3 148 Gene3D G3DSA:3.90.1170.40 2 145 1.2E-45 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 APY29_RS17495 a026248b73d0d9e9df2be971d0386fe3 148 SUPERFAMILY SSF54690 12 143 4.84E-43 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 APY29_RS06310 04b497ccd3be1cb58732081e51905120 175 Gene3D G3DSA:3.40.630.30 1 170 7.9E-33 T 28-03-2018 APY29_RS06310 04b497ccd3be1cb58732081e51905120 175 SUPERFAMILY SSF55729 2 158 6.42E-34 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS06310 04b497ccd3be1cb58732081e51905120 175 Pfam PF00583 Acetyltransferase (GNAT) family 35 146 8.9E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 APY29_RS12025 cdfde53c54bf0e268c7b7710733d13ae 234 SMART SM00850 136 233 1.7E-28 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 APY29_RS12025 cdfde53c54bf0e268c7b7710733d13ae 234 SMART SM00448 2 110 8.1E-16 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS12025 cdfde53c54bf0e268c7b7710733d13ae 234 Pfam PF04397 LytTr DNA-binding domain 138 232 5.5E-22 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 APY29_RS12025 cdfde53c54bf0e268c7b7710733d13ae 234 SUPERFAMILY SSF52172 5 116 3.7E-23 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS12025 cdfde53c54bf0e268c7b7710733d13ae 234 Pfam PF00072 Response regulator receiver domain 5 111 1.2E-16 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS12025 cdfde53c54bf0e268c7b7710733d13ae 234 Gene3D G3DSA:2.20.25.10 197 233 8.8E-12 T 28-03-2018 APY29_RS12025 cdfde53c54bf0e268c7b7710733d13ae 234 Gene3D G3DSA:2.40.50.40 139 196 2.3E-14 T 28-03-2018 APY29_RS12025 cdfde53c54bf0e268c7b7710733d13ae 234 Gene3D G3DSA:3.40.50.2300 2 138 3.0E-21 T 28-03-2018 APY29_RS08420 c2680ca7a7a3ec10db5de02c83afe37c 159 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 135 1.4E-10 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain APY29_RS08420 c2680ca7a7a3ec10db5de02c83afe37c 159 SUPERFAMILY SSF54534 2 139 2.36E-33 T 28-03-2018 APY29_RS08420 c2680ca7a7a3ec10db5de02c83afe37c 159 Gene3D G3DSA:3.10.50.40 1 159 1.2E-26 T 28-03-2018 APY29_RS14065 4d3a78b06e238e6b18e07276198090f2 183 SMART SM00463 97 181 5.0E-14 T 28-03-2018 IPR002625 Smr domain APY29_RS14065 4d3a78b06e238e6b18e07276198090f2 183 Pfam PF01713 Smr domain 100 180 1.5E-21 T 28-03-2018 IPR002625 Smr domain APY29_RS14065 4d3a78b06e238e6b18e07276198090f2 183 SUPERFAMILY SSF160443 98 180 8.76E-17 T 28-03-2018 IPR002625 Smr domain APY29_RS06365 2ea304e46aa67bc0808239090de6e1db 346 SUPERFAMILY SSF74653 234 344 8.44E-13 T 28-03-2018 APY29_RS06365 2ea304e46aa67bc0808239090de6e1db 346 Gene3D G3DSA:3.30.1150.10 263 337 8.9E-11 T 28-03-2018 APY29_RS06365 2ea304e46aa67bc0808239090de6e1db 346 Pfam PF13103 TonB C terminal 257 341 3.2E-8 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 APY29_RS06365 2ea304e46aa67bc0808239090de6e1db 346 TIGRFAM TIGR02794 tolA_full: protein TolA 18 340 6.8E-45 T 28-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 APY29_RS15135 f1005522ec1a7342af7099e1f1344d7d 197 Pfam PF03641 Possible lysine decarboxylase 46 165 5.5E-38 T 28-03-2018 IPR031100 LOG family APY29_RS15135 f1005522ec1a7342af7099e1f1344d7d 197 Gene3D G3DSA:3.40.50.450 1 196 1.1E-58 T 28-03-2018 APY29_RS15135 f1005522ec1a7342af7099e1f1344d7d 197 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 179 3.5E-56 T 28-03-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG APY29_RS15135 f1005522ec1a7342af7099e1f1344d7d 197 SUPERFAMILY SSF102405 1 179 1.01E-61 T 28-03-2018 APY29_RS05130 81a67698bd21fe335489861e16a67de4 764 SUPERFAMILY SSF56935 41 764 4.95E-88 T 28-03-2018 APY29_RS05130 81a67698bd21fe335489861e16a67de4 764 Gene3D G3DSA:2.170.130.10 41 175 7.8E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS05130 81a67698bd21fe335489861e16a67de4 764 Gene3D G3DSA:2.40.170.20 178 764 3.7E-58 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS05130 81a67698bd21fe335489861e16a67de4 764 Pfam PF00593 TonB dependent receptor 251 763 3.0E-41 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS05130 81a67698bd21fe335489861e16a67de4 764 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 160 4.0E-10 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS10240 b6046af9053e6c10163c47a62b27564c 161 Pfam PF13683 Integrase core domain 79 144 9.0E-26 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 APY29_RS10240 b6046af9053e6c10163c47a62b27564c 161 Gene3D G3DSA:3.30.420.10 1 159 3.3E-33 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS10240 b6046af9053e6c10163c47a62b27564c 161 SUPERFAMILY SSF53098 1 152 2.78E-36 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS21885 6770ea1cad497c85cacd5a51e02c21d6 536 SUPERFAMILY SSF52096 277 536 7.47E-87 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS21885 6770ea1cad497c85cacd5a51e02c21d6 536 Pfam PF01039 Carboxyl transferase domain 48 526 1.4E-149 T 28-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 APY29_RS21885 6770ea1cad497c85cacd5a51e02c21d6 536 SUPERFAMILY SSF52096 23 269 7.09E-72 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS21885 6770ea1cad497c85cacd5a51e02c21d6 536 Gene3D G3DSA:3.90.226.10 9 273 9.2E-68 T 28-03-2018 APY29_RS21885 6770ea1cad497c85cacd5a51e02c21d6 536 Gene3D G3DSA:3.90.226.10 274 531 7.2E-71 T 28-03-2018 APY29_RS21700 272cc9d7bf079cbfc247257bb34eb07d 163 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 10 162 1.3E-55 T 28-03-2018 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 APY29_RS21700 272cc9d7bf079cbfc247257bb34eb07d 163 Gene3D G3DSA:1.10.3330.10 8 163 4.8E-46 T 28-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 APY29_RS21700 272cc9d7bf079cbfc247257bb34eb07d 163 SUPERFAMILY SSF158694 9 162 1.83E-48 T 28-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 APY29_RS21700 272cc9d7bf079cbfc247257bb34eb07d 163 Pfam PF09349 OHCU decarboxylase 9 160 7.1E-39 T 28-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 APY29_RS03535 431aad4157bfd8baf4d86554a960d6a0 689 Pfam PF01431 Peptidase family M13 486 686 1.2E-61 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS03535 431aad4157bfd8baf4d86554a960d6a0 689 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 517 533 1.6E-17 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS03535 431aad4157bfd8baf4d86554a960d6a0 689 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 478 490 1.6E-17 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS03535 431aad4157bfd8baf4d86554a960d6a0 689 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 496 508 1.6E-17 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS03535 431aad4157bfd8baf4d86554a960d6a0 689 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 588 599 1.6E-17 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS03535 431aad4157bfd8baf4d86554a960d6a0 689 SUPERFAMILY SSF55486 37 689 1.1E-195 T 28-03-2018 APY29_RS03535 431aad4157bfd8baf4d86554a960d6a0 689 Pfam PF05649 Peptidase family M13 49 434 6.4E-89 T 28-03-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 APY29_RS03535 431aad4157bfd8baf4d86554a960d6a0 689 Gene3D G3DSA:3.40.390.10 357 689 1.3E-99 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APY29_RS03535 431aad4157bfd8baf4d86554a960d6a0 689 Gene3D G3DSA:3.40.390.10 43 275 5.1E-14 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APY29_RS08495 e97ef7176d98faa973f5b733348f34ac 189 Pfam PF00692 dUTPase 81 184 5.3E-7 T 28-03-2018 IPR029054 dUTPase-like APY29_RS08495 e97ef7176d98faa973f5b733348f34ac 189 SUPERFAMILY SSF51283 3 188 6.15E-54 T 28-03-2018 IPR029054 dUTPase-like APY29_RS08495 e97ef7176d98faa973f5b733348f34ac 189 Hamap MF_00146 dCTP deaminase [dcd]. 1 189 28.445 T 28-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 APY29_RS08495 e97ef7176d98faa973f5b733348f34ac 189 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 5 188 2.8E-48 T 28-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 APY29_RS08495 e97ef7176d98faa973f5b733348f34ac 189 Gene3D G3DSA:2.70.40.10 1 162 1.3E-59 T 28-03-2018 APY29_RS05640 ef5d670352ba52bb317c87d5e8274651 356 SUPERFAMILY SSF111369 52 267 2.09E-41 T 28-03-2018 APY29_RS05640 ef5d670352ba52bb317c87d5e8274651 356 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 341 1.6E-77 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 APY29_RS05640 ef5d670352ba52bb317c87d5e8274651 356 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 261 2.5E-31 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APY29_RS05640 ef5d670352ba52bb317c87d5e8274651 356 Gene3D G3DSA:1.20.1600.10 38 304 5.0E-19 T 28-03-2018 APY29_RS20090 9c4bbc0083df4a3a6ae6240913eccc97 312 Pfam PF00756 Putative esterase 60 245 3.8E-17 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 APY29_RS20090 9c4bbc0083df4a3a6ae6240913eccc97 312 Gene3D G3DSA:3.40.50.1820 43 312 5.7E-26 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS20090 9c4bbc0083df4a3a6ae6240913eccc97 312 SUPERFAMILY SSF53474 43 302 4.05E-54 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS06840 b0092f53064c5844a0386ce38efb1786 304 Gene3D G3DSA:3.40.50.1820 8 284 8.2E-41 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS06840 b0092f53064c5844a0386ce38efb1786 304 SUPERFAMILY SSF53474 22 282 3.21E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS06840 b0092f53064c5844a0386ce38efb1786 304 Pfam PF12146 Serine aminopeptidase, S33 33 268 3.3E-16 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 APY29_RS20185 288573409e48d03180544c4676a90211 895 Gene3D G3DSA:3.40.50.920 711 895 8.9E-41 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APY29_RS20185 288573409e48d03180544c4676a90211 895 Gene3D G3DSA:3.40.50.970 59 475 2.3E-79 T 28-03-2018 APY29_RS20185 288573409e48d03180544c4676a90211 895 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 9 893 0.0 T 28-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 APY29_RS20185 288573409e48d03180544c4676a90211 895 SUPERFAMILY SSF52922 706 893 2.09E-59 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APY29_RS20185 288573409e48d03180544c4676a90211 895 PIRSF PIRSF000156 1 895 0.0 T 28-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 APY29_RS20185 288573409e48d03180544c4676a90211 895 SUPERFAMILY SSF52518 480 704 1.3E-89 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold APY29_RS20185 288573409e48d03180544c4676a90211 895 SUPERFAMILY SSF52518 60 472 7.86E-134 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold APY29_RS20185 288573409e48d03180544c4676a90211 895 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 139 294 3.2E-7 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 APY29_RS20185 288573409e48d03180544c4676a90211 895 Gene3D G3DSA:3.40.50.970 476 710 4.6E-60 T 28-03-2018 APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 164 241 3.4E-18 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 Gene3D G3DSA:3.20.20.60 521 838 2.0E-92 T 28-03-2018 APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 455 466 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 Pfam PF00391 PEP-utilising enzyme, mobile domain 425 496 4.9E-20 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 173 180 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 713 731 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 SUPERFAMILY SSF55594 164 242 1.28E-20 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 199 214 - T 28-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 SUPERFAMILY SSF55804 10 145 4.19E-32 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 564 583 5.0E-21 T 28-03-2018 APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 713 728 5.0E-21 T 28-03-2018 APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 766 778 5.0E-21 T 28-03-2018 APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 730 745 5.0E-21 T 28-03-2018 APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 Gene3D G3DSA:3.40.930.10 8 148 2.1E-25 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 144 4.0E-27 T 28-03-2018 IPR002178 PTS EIIA type-2 domain APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 275 830 4.7E-145 T 28-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 Gene3D G3DSA:3.50.30.10 417 515 3.9E-23 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 SUPERFAMILY SSF47831 311 410 6.02E-23 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 SUPERFAMILY SSF51621 524 815 5.23E-99 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 Gene3D G3DSA:1.10.274.10 308 413 4.1E-24 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 SUPERFAMILY SSF52009 395 516 2.62E-28 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 PRINTS PR00107 Phosphocarrier protein signature 173 189 1.7E-14 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 PRINTS PR00107 Phosphocarrier protein signature 198 213 1.7E-14 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 PRINTS PR00107 Phosphocarrier protein signature 213 230 1.7E-14 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 Pfam PF00381 PTS HPr component phosphorylation site 165 241 5.3E-20 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 522 806 2.0E-106 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 Gene3D G3DSA:3.30.1340.10 162 246 3.7E-22 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like APY29_RS09645 dfb511d551febded4a54c88dd2dd7569 838 Pfam PF05524 PEP-utilising enzyme, N-terminal 277 395 1.4E-19 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APY29_RS11925 1220b5a13258a5331bbed939f3cede8f 67 PRINTS PR01217 Proline rich extensin signature 40 56 4.7E-13 T 28-03-2018 APY29_RS11925 1220b5a13258a5331bbed939f3cede8f 67 PRINTS PR01217 Proline rich extensin signature 19 40 4.7E-13 T 28-03-2018 APY29_RS11925 1220b5a13258a5331bbed939f3cede8f 67 PRINTS PR01217 Proline rich extensin signature 7 19 4.7E-13 T 28-03-2018 APY29_RS22985 051fd18d4c78db31e464d793c2ed6a7c 1337 Pfam PF13555 P-loop containing region of AAA domain 31 90 6.4E-22 T 28-03-2018 APY29_RS22985 051fd18d4c78db31e464d793c2ed6a7c 1337 Gene3D G3DSA:3.40.50.300 29 498 8.9E-15 T 28-03-2018 APY29_RS22985 051fd18d4c78db31e464d793c2ed6a7c 1337 Gene3D G3DSA:3.40.50.300 875 1085 2.6E-4 T 28-03-2018 APY29_RS22985 051fd18d4c78db31e464d793c2ed6a7c 1337 SUPERFAMILY SSF52540 918 1080 8.1E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS22985 051fd18d4c78db31e464d793c2ed6a7c 1337 SUPERFAMILY SSF52540 35 80 8.1E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS22985 051fd18d4c78db31e464d793c2ed6a7c 1337 Pfam PF13558 Putative exonuclease SbcCD, C subunit 978 1067 1.5E-20 T 28-03-2018 APY29_RS17395 391953bca46e58cfeae48c21108fe14e 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APY29_RS17395 391953bca46e58cfeae48c21108fe14e 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 7.2E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17395 391953bca46e58cfeae48c21108fe14e 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 7.2E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17395 391953bca46e58cfeae48c21108fe14e 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 7.2E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17395 391953bca46e58cfeae48c21108fe14e 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.2E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17395 391953bca46e58cfeae48c21108fe14e 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 7.2E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17395 391953bca46e58cfeae48c21108fe14e 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 7.2E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17395 391953bca46e58cfeae48c21108fe14e 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 244 6.6E-65 T 28-03-2018 APY29_RS17395 391953bca46e58cfeae48c21108fe14e 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 245 1.0E-98 T 28-03-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 APY29_RS17395 391953bca46e58cfeae48c21108fe14e 247 SUPERFAMILY SSF51735 6 246 6.38E-83 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS17395 391953bca46e58cfeae48c21108fe14e 247 Gene3D G3DSA:3.40.50.720 46 247 4.0E-65 T 28-03-2018 APY29_RS17395 391953bca46e58cfeae48c21108fe14e 247 Gene3D G3DSA:3.40.50.720 1 45 4.2E-9 T 28-03-2018 APY29_RS17395 391953bca46e58cfeae48c21108fe14e 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 190 1.2E-4 T 28-03-2018 APY29_RS17395 391953bca46e58cfeae48c21108fe14e 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.1E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17395 391953bca46e58cfeae48c21108fe14e 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.1E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17395 391953bca46e58cfeae48c21108fe14e 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.1E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS12475 782bbe23e67eb10a8b9e4e4f11d59708 380 Pfam PF00581 Rhodanese-like domain 17 98 3.2E-7 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS12475 782bbe23e67eb10a8b9e4e4f11d59708 380 SMART SM00450 6 102 1.2E-10 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS12475 782bbe23e67eb10a8b9e4e4f11d59708 380 SUPERFAMILY SSF52821 4 105 1.19E-22 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS12475 782bbe23e67eb10a8b9e4e4f11d59708 380 Gene3D G3DSA:3.40.250.10 3 108 1.2E-18 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS12475 782bbe23e67eb10a8b9e4e4f11d59708 380 SUPERFAMILY SSF69572 114 362 9.42E-96 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APY29_RS12475 782bbe23e67eb10a8b9e4e4f11d59708 380 Gene3D G3DSA:3.40.50.720 109 361 5.6E-77 T 28-03-2018 APY29_RS12475 782bbe23e67eb10a8b9e4e4f11d59708 380 Pfam PF00899 ThiF family 119 356 3.1E-70 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APY29_RS03365 54e7e3931006c3fd6569b4c79c207ae9 60 Pfam PF12244 Protein of unknown function (DUF3606) 6 56 2.2E-17 T 28-03-2018 IPR022037 Protein of unknown function DUF3606 APY29_RS18585 102ee1109e596ea599dbde46cff32cd0 303 Pfam PF00850 Histone deacetylase domain 18 301 1.6E-76 T 28-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 APY29_RS18585 102ee1109e596ea599dbde46cff32cd0 303 PRINTS PR01270 Histone deacetylase superfamily signature 117 140 4.2E-16 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 APY29_RS18585 102ee1109e596ea599dbde46cff32cd0 303 PRINTS PR01270 Histone deacetylase superfamily signature 231 241 4.2E-16 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 APY29_RS18585 102ee1109e596ea599dbde46cff32cd0 303 PRINTS PR01270 Histone deacetylase superfamily signature 151 166 4.2E-16 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 APY29_RS18585 102ee1109e596ea599dbde46cff32cd0 303 Gene3D G3DSA:3.40.800.20 1 303 1.1E-101 T 28-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 APY29_RS18585 102ee1109e596ea599dbde46cff32cd0 303 SUPERFAMILY SSF52768 1 302 1.34E-97 T 28-03-2018 APY29_RS22960 01f07e42fba3540d96761090b8966095 421 PRINTS PR01035 Tetracycline resistance protein signature 351 374 5.2E-57 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APY29_RS22960 01f07e42fba3540d96761090b8966095 421 PRINTS PR01035 Tetracycline resistance protein signature 89 113 5.2E-57 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APY29_RS22960 01f07e42fba3540d96761090b8966095 421 PRINTS PR01035 Tetracycline resistance protein signature 263 283 5.2E-57 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APY29_RS22960 01f07e42fba3540d96761090b8966095 421 PRINTS PR01035 Tetracycline resistance protein signature 27 43 5.2E-57 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APY29_RS22960 01f07e42fba3540d96761090b8966095 421 PRINTS PR01035 Tetracycline resistance protein signature 234 251 5.2E-57 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APY29_RS22960 01f07e42fba3540d96761090b8966095 421 PRINTS PR01035 Tetracycline resistance protein signature 291 312 5.2E-57 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APY29_RS22960 01f07e42fba3540d96761090b8966095 421 PRINTS PR01035 Tetracycline resistance protein signature 116 137 5.2E-57 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APY29_RS22960 01f07e42fba3540d96761090b8966095 421 PRINTS PR01035 Tetracycline resistance protein signature 174 194 5.2E-57 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APY29_RS22960 01f07e42fba3540d96761090b8966095 421 PRINTS PR01035 Tetracycline resistance protein signature 146 168 5.2E-57 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APY29_RS22960 01f07e42fba3540d96761090b8966095 421 Gene3D G3DSA:1.20.1250.20 214 407 1.5E-21 T 28-03-2018 APY29_RS22960 01f07e42fba3540d96761090b8966095 421 Pfam PF07690 Major Facilitator Superfamily 21 367 1.7E-53 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS22960 01f07e42fba3540d96761090b8966095 421 Gene3D G3DSA:1.20.1250.20 9 208 3.6E-39 T 28-03-2018 APY29_RS22960 01f07e42fba3540d96761090b8966095 421 SUPERFAMILY SSF103473 13 407 1.06E-69 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS09385 decb646460c7e9e3d89ad08f6ea76488 779 Gene3D G3DSA:3.40.50.1820 493 765 9.7E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS09385 decb646460c7e9e3d89ad08f6ea76488 779 Gene3D G3DSA:2.140.10.30 81 492 7.3E-58 T 28-03-2018 APY29_RS09385 decb646460c7e9e3d89ad08f6ea76488 779 SUPERFAMILY SSF82171 177 501 1.31E-34 T 28-03-2018 APY29_RS09385 decb646460c7e9e3d89ad08f6ea76488 779 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 175 473 2.2E-66 T 28-03-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 APY29_RS09385 decb646460c7e9e3d89ad08f6ea76488 779 SUPERFAMILY SSF53474 504 763 4.76E-50 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS09385 decb646460c7e9e3d89ad08f6ea76488 779 Pfam PF00326 Prolyl oligopeptidase family 569 764 4.6E-49 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APY29_RS23385 919b6b03bdd355008b918bbc11e04110 408 Pfam PF04796 Plasmid encoded RepA protein 188 347 2.5E-31 T 28-03-2018 IPR006881 Plasmid encoded RepA protein APY29_RS02050 a967f43d4a52ad15d6f795df5517b2bc 334 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 8 327 48.627 T 28-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 APY29_RS02050 a967f43d4a52ad15d6f795df5517b2bc 334 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 13 324 2.6E-120 T 28-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 APY29_RS02050 a967f43d4a52ad15d6f795df5517b2bc 334 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 95 113 - T 28-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 APY29_RS02050 a967f43d4a52ad15d6f795df5517b2bc 334 Gene3D G3DSA:3.20.20.70 10 250 2.5E-46 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS02050 a967f43d4a52ad15d6f795df5517b2bc 334 Pfam PF01207 Dihydrouridine synthase (Dus) 16 317 3.0E-78 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APY29_RS02050 a967f43d4a52ad15d6f795df5517b2bc 334 SUPERFAMILY SSF51395 13 324 1.65E-73 T 28-03-2018 APY29_RS02050 a967f43d4a52ad15d6f795df5517b2bc 334 PIRSF PIRSF006621 3 327 1.8E-77 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APY29_RS04825 217d414e84b3b0bf8acf4b9330091828 397 SUPERFAMILY SSF56935 320 390 6.11E-11 T 28-03-2018 APY29_RS04825 217d414e84b3b0bf8acf4b9330091828 397 SUPERFAMILY SSF56935 32 281 6.11E-11 T 28-03-2018 APY29_RS04825 217d414e84b3b0bf8acf4b9330091828 397 Gene3D G3DSA:2.40.160.10 12 397 4.1E-35 T 28-03-2018 APY29_RS04825 217d414e84b3b0bf8acf4b9330091828 397 Pfam PF07396 Phosphate-selective porin O and P 36 397 7.3E-92 T 28-03-2018 IPR010870 Phosphate-selective porin O/P APY29_RS09020 5afc729b4c47d04f2500090f2527b9a1 360 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 47 271 1.8E-42 T 28-03-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 APY29_RS13510 1ea6fce2480fa08f5ebc052e41db790c 108 Gene3D G3DSA:1.10.1270.10 1 106 5.5E-21 T 28-03-2018 APY29_RS13510 1ea6fce2480fa08f5ebc052e41db790c 108 Pfam PF01371 Trp repressor protein 16 100 2.7E-28 T 28-03-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 APY29_RS13510 1ea6fce2480fa08f5ebc052e41db790c 108 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 17 98 9.2E-15 T 28-03-2018 IPR013368 TrpR homologue YerC/YecD APY29_RS13510 1ea6fce2480fa08f5ebc052e41db790c 108 SUPERFAMILY SSF48295 17 100 1.62E-23 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 APY29_RS13510 1ea6fce2480fa08f5ebc052e41db790c 108 PIRSF PIRSF012508 4 106 6.3E-28 T 28-03-2018 IPR013368 TrpR homologue YerC/YecD APY29_RS17455 12f2d33de58e89dda1b0a3898542a1b5 650 SMART SM00460 401 472 2.7E-21 T 28-03-2018 IPR002931 Transglutaminase-like APY29_RS17455 12f2d33de58e89dda1b0a3898542a1b5 650 Pfam PF11992 Domain of unknown function (DUF3488) 13 326 1.1E-83 T 28-03-2018 IPR021878 Protein of unknown function DUF3488 APY29_RS17455 12f2d33de58e89dda1b0a3898542a1b5 650 Pfam PF01841 Transglutaminase-like superfamily 356 470 2.3E-26 T 28-03-2018 IPR002931 Transglutaminase-like APY29_RS17455 12f2d33de58e89dda1b0a3898542a1b5 650 Gene3D G3DSA:3.90.260.10 357 485 9.3E-23 T 28-03-2018 IPR002931 Transglutaminase-like APY29_RS17455 12f2d33de58e89dda1b0a3898542a1b5 650 SUPERFAMILY SSF54001 277 594 2.1E-63 T 28-03-2018 APY29_RS02275 8eb8458ffd907752e8960f46f41d6679 456 PRINTS PR00481 Cytosol aminopeptidase signature 241 262 2.1E-42 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APY29_RS02275 8eb8458ffd907752e8960f46f41d6679 456 PRINTS PR00481 Cytosol aminopeptidase signature 278 299 2.1E-42 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APY29_RS02275 8eb8458ffd907752e8960f46f41d6679 456 PRINTS PR00481 Cytosol aminopeptidase signature 300 320 2.1E-42 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APY29_RS02275 8eb8458ffd907752e8960f46f41d6679 456 PRINTS PR00481 Cytosol aminopeptidase signature 219 236 2.1E-42 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APY29_RS02275 8eb8458ffd907752e8960f46f41d6679 456 PRINTS PR00481 Cytosol aminopeptidase signature 328 343 2.1E-42 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APY29_RS02275 8eb8458ffd907752e8960f46f41d6679 456 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 146 430 8.6E-103 T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APY29_RS02275 8eb8458ffd907752e8960f46f41d6679 456 SUPERFAMILY SSF53187 140 453 5.34E-105 T 28-03-2018 APY29_RS02275 8eb8458ffd907752e8960f46f41d6679 456 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 304 311 - T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APY29_RS02275 8eb8458ffd907752e8960f46f41d6679 456 Gene3D G3DSA:3.40.220.10 8 131 3.3E-10 T 28-03-2018 APY29_RS02275 8eb8458ffd907752e8960f46f41d6679 456 Gene3D G3DSA:3.40.630.10 132 454 3.1E-116 T 28-03-2018 APY29_RS17775 d69be51ec9f2f65ad1ee5ab203528df0 806 Pfam PF07715 TonB-dependent Receptor Plug Domain 93 194 1.0E-10 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS17775 d69be51ec9f2f65ad1ee5ab203528df0 806 SUPERFAMILY SSF56935 76 315 6.23E-91 T 28-03-2018 APY29_RS17775 d69be51ec9f2f65ad1ee5ab203528df0 806 SUPERFAMILY SSF56935 352 806 6.23E-91 T 28-03-2018 APY29_RS17775 d69be51ec9f2f65ad1ee5ab203528df0 806 Gene3D G3DSA:2.40.170.20 215 806 2.0E-62 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS17775 d69be51ec9f2f65ad1ee5ab203528df0 806 Pfam PF00593 TonB dependent receptor 342 805 8.0E-40 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS17775 d69be51ec9f2f65ad1ee5ab203528df0 806 Gene3D G3DSA:2.170.130.10 74 214 9.8E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS17775 d69be51ec9f2f65ad1ee5ab203528df0 806 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 789 806 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site APY29_RS03875 450d942df1d6f0844584d8300fe0d240 515 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 368 377 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APY29_RS03875 450d942df1d6f0844584d8300fe0d240 515 Gene3D G3DSA:2.40.30.20 5 84 3.6E-29 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03875 450d942df1d6f0844584d8300fe0d240 515 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 384 509 3.6E-45 T 28-03-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03875 450d942df1d6f0844584d8300fe0d240 515 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 94 2.3E-11 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APY29_RS03875 450d942df1d6f0844584d8300fe0d240 515 Gene3D G3DSA:3.40.50.300 85 377 5.6E-115 T 28-03-2018 APY29_RS03875 450d942df1d6f0844584d8300fe0d240 515 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 3 514 49.914 T 28-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03875 450d942df1d6f0844584d8300fe0d240 515 SUPERFAMILY SSF50615 12 96 1.59E-25 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APY29_RS03875 450d942df1d6f0844584d8300fe0d240 515 SUPERFAMILY SSF52540 98 383 1.89E-95 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS03875 450d942df1d6f0844584d8300fe0d240 515 Gene3D G3DSA:1.20.150.20 386 512 7.0E-47 T 28-03-2018 APY29_RS03875 450d942df1d6f0844584d8300fe0d240 515 SUPERFAMILY SSF47917 385 512 1.1E-46 T 28-03-2018 APY29_RS03875 450d942df1d6f0844584d8300fe0d240 515 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 5 512 5.7E-248 T 28-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03875 450d942df1d6f0844584d8300fe0d240 515 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 377 1.7E-72 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APY29_RS12385 c760e70eb0a610e9c1d3abf0fb2d23c0 410 SUPERFAMILY SSF53335 10 393 3.73E-98 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS12385 c760e70eb0a610e9c1d3abf0fb2d23c0 410 Gene3D G3DSA:3.40.50.150 11 175 2.3E-55 T 28-03-2018 APY29_RS12385 c760e70eb0a610e9c1d3abf0fb2d23c0 410 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 14 392 4.0E-61 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APY29_RS12385 c760e70eb0a610e9c1d3abf0fb2d23c0 410 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 82 94 - T 28-03-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 APY29_RS12385 c760e70eb0a610e9c1d3abf0fb2d23c0 410 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 12 28 9.6E-15 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APY29_RS12385 c760e70eb0a610e9c1d3abf0fb2d23c0 410 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 121 135 9.6E-15 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APY29_RS12385 c760e70eb0a610e9c1d3abf0fb2d23c0 410 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 167 180 9.6E-15 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APY29_RS12385 c760e70eb0a610e9c1d3abf0fb2d23c0 410 Gene3D G3DSA:3.90.120.10 176 382 5.6E-30 T 28-03-2018 APY29_RS12385 c760e70eb0a610e9c1d3abf0fb2d23c0 410 Pfam PF00145 C-5 cytosine-specific DNA methylase 12 394 1.6E-66 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS13820 11fd4db53211336640c50d430b32ffb1 638 SUPERFAMILY SSF52266 105 208 8.33E-74 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain APY29_RS13820 11fd4db53211336640c50d430b32ffb1 638 SUPERFAMILY SSF52266 403 589 8.33E-74 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain APY29_RS13820 11fd4db53211336640c50d430b32ffb1 638 Gene3D G3DSA:3.40.50.1110 106 532 2.7E-74 T 28-03-2018 APY29_RS13820 11fd4db53211336640c50d430b32ffb1 638 Pfam PF13364 Beta-galactosidase jelly roll domain 250 356 3.3E-8 T 28-03-2018 IPR025300 Beta-galactosidase jelly roll domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024096|Reactome: R-HSA-4085001|Reactome: R-HSA-6798695 APY29_RS13820 11fd4db53211336640c50d430b32ffb1 638 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 404 526 3.0E-12 T 28-03-2018 IPR005181 Sialate O-acetylesterase domain APY29_RS13820 11fd4db53211336640c50d430b32ffb1 638 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 106 209 5.2E-7 T 28-03-2018 IPR005181 Sialate O-acetylesterase domain APY29_RS13820 11fd4db53211336640c50d430b32ffb1 638 SUPERFAMILY SSF49785 248 366 1.15E-19 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS13820 11fd4db53211336640c50d430b32ffb1 638 Gene3D G3DSA:2.60.40.1310 23 105 9.8E-5 T 28-03-2018 APY29_RS04695 144e8fa8c67f0fc887bc11e62d7949a0 258 Pfam PF01522 Polysaccharide deacetylase 76 193 1.0E-30 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 APY29_RS04695 144e8fa8c67f0fc887bc11e62d7949a0 258 SUPERFAMILY SSF88713 70 252 1.21E-48 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APY29_RS04695 144e8fa8c67f0fc887bc11e62d7949a0 258 Gene3D G3DSA:3.20.20.370 66 258 4.8E-41 T 28-03-2018 APY29_RS20205 62da8d98c9280ef7e959b20bc729f5e1 675 SUPERFAMILY SSF81606 450 653 3.66E-8 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 APY29_RS20205 62da8d98c9280ef7e959b20bc729f5e1 675 SUPERFAMILY SSF158472 348 399 5.75E-9 T 28-03-2018 APY29_RS20205 62da8d98c9280ef7e959b20bc729f5e1 675 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 466 653 7.7E-46 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 APY29_RS20205 62da8d98c9280ef7e959b20bc729f5e1 675 SMART SM00331 438 653 9.4E-41 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 APY29_RS20205 62da8d98c9280ef7e959b20bc729f5e1 675 Pfam PF00672 HAMP domain 348 397 1.7E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS20205 62da8d98c9280ef7e959b20bc729f5e1 675 Gene3D G3DSA:3.30.450.20 51 216 1.5E-11 T 28-03-2018 APY29_RS20205 62da8d98c9280ef7e959b20bc729f5e1 675 Gene3D G3DSA:3.60.40.10 401 656 2.0E-36 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 APY29_RS20205 62da8d98c9280ef7e959b20bc729f5e1 675 Pfam PF02743 Cache domain 55 310 1.7E-19 T 28-03-2018 IPR033479 Double Cache domain 1 APY29_RS20205 62da8d98c9280ef7e959b20bc729f5e1 675 SMART SM00304 348 401 1.8E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS09705 203ff9d971c0b214a01e3b5200f16a00 284 SUPERFAMILY SSF109709 156 217 3.4E-5 T 28-03-2018 APY29_RS09705 203ff9d971c0b214a01e3b5200f16a00 284 Gene3D G3DSA:1.20.5.170 215 268 8.2E-4 T 28-03-2018 APY29_RS09705 203ff9d971c0b214a01e3b5200f16a00 284 Gene3D G3DSA:1.20.5.360 269 284 0.032 T 28-03-2018 APY29_RS09825 7ea6d87e4f1035ded7f4292302366a0d 454 Pfam PF00171 Aldehyde dehydrogenase family 3 451 7.8E-137 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APY29_RS09825 7ea6d87e4f1035ded7f4292302366a0d 454 SUPERFAMILY SSF53720 3 453 5.76E-138 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APY29_RS09825 7ea6d87e4f1035ded7f4292302366a0d 454 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 255 266 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APY29_RS09825 7ea6d87e4f1035ded7f4292302366a0d 454 Gene3D G3DSA:3.40.605.10 1 246 5.1E-73 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APY29_RS09825 7ea6d87e4f1035ded7f4292302366a0d 454 Gene3D G3DSA:3.40.309.10 247 437 2.4E-64 T 28-03-2018 APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Gene3D G3DSA:3.10.20.90 782 817 0.029 T 28-03-2018 APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Gene3D G3DSA:3.10.20.90 611 646 0.12 T 28-03-2018 APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Gene3D G3DSA:3.10.20.90 305 340 0.055 T 28-03-2018 APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Gene3D G3DSA:3.10.20.90 715 747 0.081 T 28-03-2018 APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Gene3D G3DSA:3.10.20.90 512 544 0.47 T 28-03-2018 APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Gene3D G3DSA:3.10.20.90 545 580 0.077 T 28-03-2018 APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Gene3D G3DSA:3.10.20.90 680 714 0.045 T 28-03-2018 APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Gene3D G3DSA:3.10.20.90 748 781 0.032 T 28-03-2018 APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Gene3D G3DSA:3.10.20.90 474 511 0.052 T 28-03-2018 APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Gene3D G3DSA:3.10.20.90 647 679 0.054 T 28-03-2018 APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Gene3D G3DSA:3.40.47.10 341 405 0.023 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Pfam PF03377 TAL effector repeat 696 727 3.8E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Pfam PF03377 TAL effector repeat 527 558 4.1E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Pfam PF03377 TAL effector repeat 833 857 0.039 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Pfam PF03377 TAL effector repeat 662 693 3.4E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Pfam PF03377 TAL effector repeat 357 388 5.1E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Pfam PF03377 TAL effector repeat 391 422 4.1E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Pfam PF03377 TAL effector repeat 561 591 2.8E-15 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Pfam PF03377 TAL effector repeat 493 524 3.4E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Pfam PF03377 TAL effector repeat 459 490 1.1E-13 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Pfam PF03377 TAL effector repeat 628 659 6.4E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Pfam PF03377 TAL effector repeat 425 456 1.1E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Pfam PF03377 TAL effector repeat 730 761 7.7E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Pfam PF03377 TAL effector repeat 797 825 1.9E-12 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Pfam PF03377 TAL effector repeat 594 625 3.7E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Pfam PF03377 TAL effector repeat 764 794 1.2E-14 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Pfam PF03377 TAL effector repeat 289 320 3.2E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Pfam PF03377 TAL effector repeat 323 354 6.2E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS01030 69a1b136b541720f56c132050d6d2b75 1094 Gene3D G3DSA:3.40.47.10 406 473 0.024 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 Pfam PF00072 Response regulator receiver domain 1064 1172 3.1E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 Pfam PF00512 His Kinase A (phospho-acceptor) domain 810 875 1.5E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 SMART SM00387 922 1038 2.3E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 Gene3D G3DSA:3.40.50.2300 1054 1188 1.4E-31 T 28-03-2018 APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 SUPERFAMILY SSF52172 1060 1177 7.54E-29 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 Pfam PF07494 Two component regulator propeller 35 57 0.0059 T 28-03-2018 IPR011110 Two component regulator propeller APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 SUPERFAMILY SSF47384 798 876 1.86E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 922 1036 8.6E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 Gene3D G3DSA:2.130.10.10 381 722 2.5E-15 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 Gene3D G3DSA:2.130.10.10 166 380 4.7E-15 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 Gene3D G3DSA:2.130.10.10 29 162 2.5E-19 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 SMART SM00388 810 875 8.0E-21 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1022 1035 2.1E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 PRINTS PR00344 Bacterial sensor protein C-terminal signature 962 976 2.1E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 PRINTS PR00344 Bacterial sensor protein C-terminal signature 998 1016 2.1E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 PRINTS PR00344 Bacterial sensor protein C-terminal signature 980 990 2.1E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 Pfam PF07495 Y_Y_Y domain 693 755 2.7E-9 T 28-03-2018 IPR011123 Two component regulator three Y APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 Gene3D G3DSA:3.30.565.10 870 1038 6.3E-48 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 SMART SM00448 1061 1172 5.6E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 SUPERFAMILY SSF50998 568 589 6.59E-13 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 SUPERFAMILY SSF50998 354 521 6.59E-13 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 SUPERFAMILY SSF50998 132 284 6.59E-13 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 SUPERFAMILY SSF55874 864 1040 1.57E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS06975 0abc21e5e4bbabaa8964f528391338b8 1191 Gene3D G3DSA:1.10.287.130 801 869 5.0E-16 T 28-03-2018 APY29_RS17555 5a5318620f412737d175579d775ea9f2 218 Gene3D G3DSA:3.40.50.150 50 198 1.3E-10 T 28-03-2018 APY29_RS17555 5a5318620f412737d175579d775ea9f2 218 PIRSF PIRSF028445 1 218 2.0E-131 T 28-03-2018 IPR016885 Uncharacterised conserved protein UCP028445 APY29_RS17555 5a5318620f412737d175579d775ea9f2 218 SUPERFAMILY SSF53335 76 175 1.53E-13 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS14085 fd78f5e29d68fa0ffba0c0d8cda13c01 121 Hamap MF_00599 Cell division protein FtsB [ftsB]. 2 93 35.159 T 28-03-2018 IPR023081 Cell division protein FtsB APY29_RS14085 fd78f5e29d68fa0ffba0c0d8cda13c01 121 Pfam PF04977 Septum formation initiator 14 92 3.7E-30 T 28-03-2018 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 APY29_RS14085 fd78f5e29d68fa0ffba0c0d8cda13c01 121 Gene3D G3DSA:1.20.5.170 30 70 5.2E-5 T 28-03-2018 APY29_RS06225 4af7e25776e80c29a7146d84a134df3c 805 Pfam PF00593 TonB dependent receptor 301 804 1.7E-31 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS06225 4af7e25776e80c29a7146d84a134df3c 805 SUPERFAMILY SSF56935 36 805 5.49E-101 T 28-03-2018 APY29_RS06225 4af7e25776e80c29a7146d84a134df3c 805 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 43 - T 28-03-2018 IPR010916 TonB box, conserved site APY29_RS06225 4af7e25776e80c29a7146d84a134df3c 805 Gene3D G3DSA:2.40.170.20 171 805 4.8E-69 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS06225 4af7e25776e80c29a7146d84a134df3c 805 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 171 4.2E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS06225 4af7e25776e80c29a7146d84a134df3c 805 Gene3D G3DSA:2.170.130.10 26 170 2.6E-29 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS14830 9ad766948d733793f1e65393d15c467c 191 SMART SM00644 20 162 1.2E-19 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 APY29_RS14830 9ad766948d733793f1e65393d15c467c 191 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 28 173 6.2E-22 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 APY29_RS14830 9ad766948d733793f1e65393d15c467c 191 SUPERFAMILY SSF55846 23 186 1.44E-34 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 APY29_RS14830 9ad766948d733793f1e65393d15c467c 191 Gene3D G3DSA:3.40.80.10 12 188 4.5E-29 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 APY29_RS01360 3835d73434347268501b934cd0dd8979 148 Gene3D G3DSA:3.40.50.620 1 148 1.8E-33 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS01360 3835d73434347268501b934cd0dd8979 148 SUPERFAMILY SSF52402 2 148 2.51E-35 T 28-03-2018 APY29_RS01360 3835d73434347268501b934cd0dd8979 148 Pfam PF00582 Universal stress protein family 1 148 1.3E-33 T 28-03-2018 IPR006016 UspA GO:0006950 APY29_RS01360 3835d73434347268501b934cd0dd8979 148 PIRSF PIRSF006276 1 148 8.1E-18 T 28-03-2018 IPR006015 Universal stress protein A APY29_RS01360 3835d73434347268501b934cd0dd8979 148 PRINTS PR01438 Universal stress protein signature 2 20 7.6E-15 T 28-03-2018 IPR006015 Universal stress protein A APY29_RS01360 3835d73434347268501b934cd0dd8979 148 PRINTS PR01438 Universal stress protein signature 108 120 7.6E-15 T 28-03-2018 IPR006015 Universal stress protein A APY29_RS01360 3835d73434347268501b934cd0dd8979 148 PRINTS PR01438 Universal stress protein signature 126 148 7.6E-15 T 28-03-2018 IPR006015 Universal stress protein A APY29_RS15075 176234c7383bf76ddd55a31cadf5a593 176 Pfam PF11101 Protein of unknown function (DUF2884) 34 118 7.1E-10 T 28-03-2018 IPR021307 Protein of unknown function DUF2884 APY29_RS15075 176234c7383bf76ddd55a31cadf5a593 176 Gene3D G3DSA:3.40.190.10 1 160 0.0011 T 28-03-2018 APY29_RS11260 6839ec40cb34405862ceb724c76eb66c 1035 Pfam PF13087 AAA domain 909 1010 1.4E-11 T 28-03-2018 APY29_RS11260 6839ec40cb34405862ceb724c76eb66c 1035 SUPERFAMILY SSF52540 847 1015 1.25E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11260 6839ec40cb34405862ceb724c76eb66c 1035 SUPERFAMILY SSF52540 737 814 1.25E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11260 6839ec40cb34405862ceb724c76eb66c 1035 SUPERFAMILY SSF52540 494 532 1.25E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11260 6839ec40cb34405862ceb724c76eb66c 1035 SUPERFAMILY SSF52540 225 271 1.25E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11260 6839ec40cb34405862ceb724c76eb66c 1035 SUPERFAMILY SSF52540 312 337 1.25E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11260 6839ec40cb34405862ceb724c76eb66c 1035 Gene3D G3DSA:3.40.50.300 854 1025 5.2E-21 T 28-03-2018 APY29_RS11260 6839ec40cb34405862ceb724c76eb66c 1035 Pfam PF13086 AAA domain 739 798 2.1E-7 T 28-03-2018 APY29_RS11260 6839ec40cb34405862ceb724c76eb66c 1035 Gene3D G3DSA:3.40.50.300 226 809 3.2E-20 T 28-03-2018 APY29_RS16625 3ca4aeae7086a81597cb45bf7682062a 353 Pfam PF01551 Peptidase family M23 25 119 7.1E-18 T 28-03-2018 IPR016047 Peptidase M23 APY29_RS16625 3ca4aeae7086a81597cb45bf7682062a 353 Gene3D G3DSA:2.70.70.10 3 198 1.5E-22 T 28-03-2018 APY29_RS16625 3ca4aeae7086a81597cb45bf7682062a 353 SUPERFAMILY SSF51261 10 106 1.05E-22 T 28-03-2018 IPR011055 Duplicated hybrid motif APY29_RS17945 c759d599f352a8a0b95cc293eab5dabd 130 PIRSF PIRSF002131 1 130 2.0E-52 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APY29_RS17945 c759d599f352a8a0b95cc293eab5dabd 130 Pfam PF00411 Ribosomal protein S11 20 129 5.3E-50 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APY29_RS17945 c759d599f352a8a0b95cc293eab5dabd 130 Gene3D G3DSA:3.30.420.80 4 130 6.5E-44 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APY29_RS17945 c759d599f352a8a0b95cc293eab5dabd 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 3.0E-54 T 28-03-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS17945 c759d599f352a8a0b95cc293eab5dabd 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 32.632 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APY29_RS17945 c759d599f352a8a0b95cc293eab5dabd 130 SUPERFAMILY SSF53137 17 130 6.02E-46 T 28-03-2018 APY29_RS17945 c759d599f352a8a0b95cc293eab5dabd 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 28-03-2018 IPR018102 Ribosomal S11, conserved site APY29_RS09740 c16e8c8d935c353a338e5f4e49cf8af4 99 SUPERFAMILY SSF46785 18 88 1.64E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS09740 c16e8c8d935c353a338e5f4e49cf8af4 99 Gene3D G3DSA:1.10.10.10 3 99 1.5E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS16880 149792ecbd36523067ac4c341781ec84 254 SUPERFAMILY SSF48317 31 241 1.77E-11 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APY29_RS16880 149792ecbd36523067ac4c341781ec84 254 Gene3D G3DSA:1.20.144.10 25 245 2.9E-4 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APY29_RS16880 149792ecbd36523067ac4c341781ec84 254 Pfam PF01569 PAP2 superfamily 109 238 3.8E-9 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APY29_RS01190 de8b717d1677db5db7623db5ca64a435 647 Gene3D G3DSA:2.30.38.10 428 514 1.6E-10 T 28-03-2018 APY29_RS01190 de8b717d1677db5db7623db5ca64a435 647 Pfam PF00501 AMP-binding enzyme 81 521 1.2E-91 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APY29_RS01190 de8b717d1677db5db7623db5ca64a435 647 Pfam PF13193 AMP-binding enzyme C-terminal domain 530 608 2.1E-25 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain APY29_RS01190 de8b717d1677db5db7623db5ca64a435 647 Gene3D G3DSA:3.30.300.30 515 627 1.4E-27 T 28-03-2018 APY29_RS01190 de8b717d1677db5db7623db5ca64a435 647 SUPERFAMILY SSF56801 15 641 3.79E-182 T 28-03-2018 APY29_RS01190 de8b717d1677db5db7623db5ca64a435 647 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 19 642 0.0 T 28-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 APY29_RS01190 de8b717d1677db5db7623db5ca64a435 647 Gene3D G3DSA:3.40.50.980 266 427 4.0E-39 T 28-03-2018 APY29_RS01190 de8b717d1677db5db7623db5ca64a435 647 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 644 52.625 T 28-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 APY29_RS01190 de8b717d1677db5db7623db5ca64a435 647 ProSitePatterns PS00455 Putative AMP-binding domain signature. 260 271 - T 28-03-2018 IPR020845 AMP-binding, conserved site APY29_RS01190 de8b717d1677db5db7623db5ca64a435 647 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 22 79 2.6E-20 T 28-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 APY29_RS01190 de8b717d1677db5db7623db5ca64a435 647 Gene3D G3DSA:3.40.50.980 72 265 3.3E-49 T 28-03-2018 APY29_RS04710 a1d8b3e6c54b6e475d4c1afd68430ed1 223 SUPERFAMILY SSF53335 22 202 7.11E-20 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS04710 a1d8b3e6c54b6e475d4c1afd68430ed1 223 Pfam PF08242 Methyltransferase domain 53 149 6.0E-15 T 28-03-2018 IPR013217 Methyltransferase type 12 APY29_RS04710 a1d8b3e6c54b6e475d4c1afd68430ed1 223 Gene3D G3DSA:3.40.50.150 6 204 9.5E-23 T 28-03-2018 APY29_RS18090 00ead0eda17f17ebdb094440081371f9 1383 Gene3D G3DSA:3.90.1800.10 1309 1352 5.5E-12 T 28-03-2018 APY29_RS18090 00ead0eda17f17ebdb094440081371f9 1383 Pfam PF04565 RNA polymerase Rpb2, domain 3 541 608 5.2E-28 T 28-03-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS18090 00ead0eda17f17ebdb094440081371f9 1383 Gene3D G3DSA:2.40.50.100 742 824 1.5E-25 T 28-03-2018 APY29_RS18090 00ead0eda17f17ebdb094440081371f9 1383 Gene3D G3DSA:3.90.1100.10 20 248 3.1E-49 T 28-03-2018 APY29_RS18090 00ead0eda17f17ebdb094440081371f9 1383 Gene3D G3DSA:3.90.1100.10 404 673 7.9E-78 T 28-03-2018 APY29_RS18090 00ead0eda17f17ebdb094440081371f9 1383 Gene3D G3DSA:3.90.1100.10 674 741 2.2E-14 T 28-03-2018 APY29_RS18090 00ead0eda17f17ebdb094440081371f9 1383 Pfam PF04560 RNA polymerase Rpb2, domain 7 1308 1382 9.5E-27 T 28-03-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS18090 00ead0eda17f17ebdb094440081371f9 1383 Pfam PF04563 RNA polymerase beta subunit 28 527 2.3E-40 T 28-03-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS18090 00ead0eda17f17ebdb094440081371f9 1383 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 9 1381 0.0 T 28-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS18090 00ead0eda17f17ebdb094440081371f9 1383 Pfam PF04561 RNA polymerase Rpb2, domain 2 362 418 5.9E-5 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS18090 00ead0eda17f17ebdb094440081371f9 1383 Pfam PF04561 RNA polymerase Rpb2, domain 2 157 227 8.4E-8 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS18090 00ead0eda17f17ebdb094440081371f9 1383 Pfam PF04561 RNA polymerase Rpb2, domain 2 449 482 5.2E-6 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS18090 00ead0eda17f17ebdb094440081371f9 1383 SUPERFAMILY SSF64484 1080 1382 0.0 T 28-03-2018 APY29_RS18090 00ead0eda17f17ebdb094440081371f9 1383 SUPERFAMILY SSF64484 349 968 0.0 T 28-03-2018 APY29_RS18090 00ead0eda17f17ebdb094440081371f9 1383 SUPERFAMILY SSF64484 13 231 0.0 T 28-03-2018 APY29_RS18090 00ead0eda17f17ebdb094440081371f9 1383 Gene3D G3DSA:2.40.270.10 1086 1284 4.4E-78 T 28-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS18090 00ead0eda17f17ebdb094440081371f9 1383 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 14 1383 12.225 T 28-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS18090 00ead0eda17f17ebdb094440081371f9 1383 Gene3D G3DSA:2.40.50.150 858 1085 1.1E-50 T 28-03-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS18090 00ead0eda17f17ebdb094440081371f9 1383 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1104 1116 - T 28-03-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS18090 00ead0eda17f17ebdb094440081371f9 1383 Pfam PF10385 RNA polymerase beta subunit external 1 domain 619 684 6.3E-22 T 28-03-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS18090 00ead0eda17f17ebdb094440081371f9 1383 Pfam PF00562 RNA polymerase Rpb2, domain 6 747 1306 3.9E-158 T 28-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APY29_RS04235 6f1c55c5a89e9319748f33ee4ed2d89c 351 SUPERFAMILY SSF51735 3 342 5.92E-93 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS04235 6f1c55c5a89e9319748f33ee4ed2d89c 351 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 321 3.8E-100 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS04235 6f1c55c5a89e9319748f33ee4ed2d89c 351 Gene3D G3DSA:3.40.50.720 2 192 2.7E-38 T 28-03-2018 APY29_RS04235 6f1c55c5a89e9319748f33ee4ed2d89c 351 Gene3D G3DSA:3.90.25.10 193 347 7.3E-49 T 28-03-2018 APY29_RS04235 6f1c55c5a89e9319748f33ee4ed2d89c 351 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 335 1.6E-155 T 28-03-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 APY29_RS16515 4080047a34093e30cfc30f97225638d2 565 Gene3D G3DSA:2.30.42.10 448 538 2.3E-7 T 28-03-2018 APY29_RS16515 4080047a34093e30cfc30f97225638d2 565 SUPERFAMILY SSF50156 463 537 1.94E-8 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS16515 4080047a34093e30cfc30f97225638d2 565 Pfam PF07720 Tetratricopeptide repeat 177 211 2.3E-9 T 28-03-2018 IPR011716 Tetratricopeptide TPR-3 APY29_RS16515 4080047a34093e30cfc30f97225638d2 565 Pfam PF05299 M61 glycyl aminopeptidase 241 359 1.3E-34 T 28-03-2018 IPR007963 Peptidase M61, catalytic domain APY29_RS16515 4080047a34093e30cfc30f97225638d2 565 Gene3D G3DSA:1.10.390.10 233 423 7.0E-10 T 28-03-2018 APY29_RS16515 4080047a34093e30cfc30f97225638d2 565 SMART SM00228 463 530 0.0087 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS16515 4080047a34093e30cfc30f97225638d2 565 PIRSF PIRSF016493 1 565 4.0E-144 T 28-03-2018 IPR024191 Peptidase M61 APY29_RS20730 42980b6b6b15aa6858a37b25f6c197fe 309 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 5 308 44.455 T 28-03-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 APY29_RS20730 42980b6b6b15aa6858a37b25f6c197fe 309 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 6 301 9.1E-62 T 28-03-2018 IPR005218 Diacylglycerol/lipid kinase APY29_RS20730 42980b6b6b15aa6858a37b25f6c197fe 309 SUPERFAMILY SSF111331 3 305 1.98E-65 T 28-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain APY29_RS20730 42980b6b6b15aa6858a37b25f6c197fe 309 SMART SM00046 5 130 8.8E-17 T 28-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 APY29_RS20730 42980b6b6b15aa6858a37b25f6c197fe 309 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 5 307 1.6E-139 T 28-03-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 APY29_RS20730 42980b6b6b15aa6858a37b25f6c197fe 309 Pfam PF00781 Diacylglycerol kinase catalytic domain 6 129 1.2E-25 T 28-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 APY29_RS20730 42980b6b6b15aa6858a37b25f6c197fe 309 Gene3D G3DSA:3.40.50.10330 1 142 3.4E-25 T 28-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 APY29_RS18245 ac1da7a423fceba0e3b495b96e7ca14e 406 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 103 162 1.0E-4 T 28-03-2018 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 APY29_RS18245 ac1da7a423fceba0e3b495b96e7ca14e 406 Gene3D G3DSA:3.20.20.80 40 307 5.2E-46 T 28-03-2018 APY29_RS18245 ac1da7a423fceba0e3b495b96e7ca14e 406 SUPERFAMILY SSF51011 311 405 8.51E-25 T 28-03-2018 APY29_RS18245 ac1da7a423fceba0e3b495b96e7ca14e 406 Pfam PF17189 Glycosyl hydrolase family 30 beta sandwich domain 315 403 3.3E-12 T 28-03-2018 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 APY29_RS18245 ac1da7a423fceba0e3b495b96e7ca14e 406 Gene3D G3DSA:2.60.40.1180 308 406 2.4E-24 T 28-03-2018 APY29_RS18245 ac1da7a423fceba0e3b495b96e7ca14e 406 SUPERFAMILY SSF51445 40 314 1.66E-51 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS12070 7bc64e6e8f8bca67329564f9ad15bb87 340 SMART SM00387 225 335 7.0E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS12070 7bc64e6e8f8bca67329564f9ad15bb87 340 Pfam PF00512 His Kinase A (phospho-acceptor) domain 113 182 2.0E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS12070 7bc64e6e8f8bca67329564f9ad15bb87 340 SUPERFAMILY SSF47384 113 183 2.43E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS12070 7bc64e6e8f8bca67329564f9ad15bb87 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 294 1.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS12070 7bc64e6e8f8bca67329564f9ad15bb87 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 295 313 1.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS12070 7bc64e6e8f8bca67329564f9ad15bb87 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 266 280 1.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS12070 7bc64e6e8f8bca67329564f9ad15bb87 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 332 1.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS12070 7bc64e6e8f8bca67329564f9ad15bb87 340 Gene3D G3DSA:1.10.287.130 91 179 2.2E-6 T 28-03-2018 APY29_RS12070 7bc64e6e8f8bca67329564f9ad15bb87 340 SUPERFAMILY SSF55874 174 336 1.7E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS12070 7bc64e6e8f8bca67329564f9ad15bb87 340 SMART SM00388 113 183 3.9E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS12070 7bc64e6e8f8bca67329564f9ad15bb87 340 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 226 333 2.0E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS12070 7bc64e6e8f8bca67329564f9ad15bb87 340 Gene3D G3DSA:3.30.565.10 183 340 2.0E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS19395 93816af218c117d0d122aca67efa2131 410 Pfam PF01966 HD domain 230 333 2.4E-6 T 28-03-2018 IPR006674 HD domain APY29_RS19395 93816af218c117d0d122aca67efa2131 410 SUPERFAMILY SSF81301 1 120 6.54E-29 T 28-03-2018 APY29_RS19395 93816af218c117d0d122aca67efa2131 410 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 409 52.067 T 28-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 APY29_RS19395 93816af218c117d0d122aca67efa2131 410 SUPERFAMILY SSF81891 121 403 1.28E-54 T 28-03-2018 APY29_RS19395 93816af218c117d0d122aca67efa2131 410 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 150 213 2.9E-12 T 28-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 APY29_RS19395 93816af218c117d0d122aca67efa2131 410 Gene3D G3DSA:1.10.3090.10 120 409 1.4E-56 T 28-03-2018 APY29_RS19395 93816af218c117d0d122aca67efa2131 410 PIRSF PIRSF000813 1 410 3.1E-195 T 28-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 APY29_RS19395 93816af218c117d0d122aca67efa2131 410 Pfam PF01743 Poly A polymerase head domain 3 123 6.9E-19 T 28-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 APY29_RS19395 93816af218c117d0d122aca67efa2131 410 Gene3D G3DSA:3.30.460.10 1 119 3.9E-30 T 28-03-2018 APY29_RS05200 0e1894ea3efd28ebf69c966a15b956a5 215 SUPERFAMILY SSF100950 2 144 2.76E-47 T 28-03-2018 APY29_RS05200 0e1894ea3efd28ebf69c966a15b956a5 215 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 5 209 3.6E-67 T 28-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 APY29_RS05200 0e1894ea3efd28ebf69c966a15b956a5 215 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 47 210 1.5E-57 T 28-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 APY29_RS05200 0e1894ea3efd28ebf69c966a15b956a5 215 SUPERFAMILY SSF75445 125 197 1.15E-22 T 28-03-2018 APY29_RS05200 0e1894ea3efd28ebf69c966a15b956a5 215 Gene3D G3DSA:3.40.50.1360 1 135 5.9E-43 T 28-03-2018 APY29_RS05200 0e1894ea3efd28ebf69c966a15b956a5 215 Gene3D G3DSA:3.30.70.260 136 195 5.3E-22 T 28-03-2018 APY29_RS05200 0e1894ea3efd28ebf69c966a15b956a5 215 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 1 215 33.615 T 28-03-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 APY29_RS07135 36b8d19ddc341981d03e5f4edbb8d8b2 335 Gene3D G3DSA:3.60.15.10 58 335 2.0E-46 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS07135 36b8d19ddc341981d03e5f4edbb8d8b2 335 SUPERFAMILY SSF56281 60 334 2.17E-50 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS07135 36b8d19ddc341981d03e5f4edbb8d8b2 335 Pfam PF12706 Beta-lactamase superfamily domain 89 301 5.9E-19 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS07135 36b8d19ddc341981d03e5f4edbb8d8b2 335 SMART SM00849 77 278 0.0053 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS20245 86ec27be63863716944baa78ed90a76e 213 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 4 203 3.0E-60 T 28-03-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 APY29_RS20245 86ec27be63863716944baa78ed90a76e 213 Hamap MF_00650 Phosphoribosyl-dephospho-CoA transferase [mdcG]. 1 209 35.452 T 28-03-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 APY29_RS20245 86ec27be63863716944baa78ed90a76e 213 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 4 203 3.1E-67 T 28-03-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 APY29_RS08695 ead804980eed213278c204b2d86ab507 312 Gene3D G3DSA:2.60.120.330 1 312 1.2E-90 T 28-03-2018 IPR027443 Isopenicillin N synthase-like APY29_RS08695 ead804980eed213278c204b2d86ab507 312 SUPERFAMILY SSF51197 3 308 1.99E-85 T 28-03-2018 APY29_RS08695 ead804980eed213278c204b2d86ab507 312 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 173 271 5.8E-16 T 28-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 APY29_RS08695 ead804980eed213278c204b2d86ab507 312 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 5 122 1.0E-30 T 28-03-2018 IPR026992 Non-haem dioxygenase N-terminal domain APY29_RS08695 ead804980eed213278c204b2d86ab507 312 PRINTS PR00682 Isopenicillin N synthase signature 191 212 1.7E-8 T 28-03-2018 APY29_RS08695 ead804980eed213278c204b2d86ab507 312 PRINTS PR00682 Isopenicillin N synthase signature 227 253 1.7E-8 T 28-03-2018 APY29_RS08695 ead804980eed213278c204b2d86ab507 312 PRINTS PR00682 Isopenicillin N synthase signature 24 41 1.7E-8 T 28-03-2018 APY29_RS04180 c9a01bd8b0313e309435297265b8bfb3 196 SUPERFAMILY SSF53335 89 164 3.65E-9 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS04180 c9a01bd8b0313e309435297265b8bfb3 196 Gene3D G3DSA:3.40.50.150 85 189 1.4E-9 T 28-03-2018 APY29_RS14920 7dbe8d307556606a19ab15cba359d1e9 135 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 80 132 2.0E-24 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB APY29_RS14920 7dbe8d307556606a19ab15cba359d1e9 135 Pfam PF11776 Nickel/cobalt transporter regulator 82 130 1.0E-18 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB APY29_RS14920 7dbe8d307556606a19ab15cba359d1e9 135 Gene3D G3DSA:3.10.450.160 21 135 8.2E-18 T 28-03-2018 APY29_RS21835 eb72de588d240a9c8f2c2da834f0bc1a 572 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 277 539 1.2E-7 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS21835 eb72de588d240a9c8f2c2da834f0bc1a 572 Gene3D G3DSA:3.60.10.10 273 571 1.5E-33 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS21835 eb72de588d240a9c8f2c2da834f0bc1a 572 SUPERFAMILY SSF56219 271 571 9.29E-35 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS15930 1b545a8a9c3903cb76dd72d318aac94d 200 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 26 199 15.291 T 28-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 APY29_RS15930 1b545a8a9c3903cb76dd72d318aac94d 200 Gene3D G3DSA:3.90.1140.10 20 200 1.1E-25 T 28-03-2018 APY29_RS15930 1b545a8a9c3903cb76dd72d318aac94d 200 Pfam PF13563 2'-5' RNA ligase superfamily 53 177 1.5E-12 T 28-03-2018 APY29_RS15930 1b545a8a9c3903cb76dd72d318aac94d 200 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 27 199 7.5E-19 T 28-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 APY29_RS15930 1b545a8a9c3903cb76dd72d318aac94d 200 SUPERFAMILY SSF55144 27 199 9.77E-32 T 28-03-2018 IPR009097 Cyclic phosphodiesterase APY29_RS15235 5f30ec9441003b7125319ba29efc4fb5 167 SUPERFAMILY SSF74982 14 143 5.1E-48 T 28-03-2018 IPR023620 Small protein B APY29_RS15235 5f30ec9441003b7125319ba29efc4fb5 167 Hamap MF_00023 SsrA-binding protein [smpB]. 1 166 68.409 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 APY29_RS15235 5f30ec9441003b7125319ba29efc4fb5 167 Pfam PF01668 SmpB protein 19 161 3.2E-56 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 APY29_RS15235 5f30ec9441003b7125319ba29efc4fb5 167 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 19 143 1.0E-67 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 APY29_RS15235 5f30ec9441003b7125319ba29efc4fb5 167 ProSitePatterns PS01317 SsrA-binding protein. 37 49 - T 28-03-2018 IPR020081 SsrA-binding protein, conserved site APY29_RS15235 5f30ec9441003b7125319ba29efc4fb5 167 Gene3D G3DSA:2.40.280.10 19 138 4.8E-44 T 28-03-2018 IPR023620 Small protein B APY29_RS15235 5f30ec9441003b7125319ba29efc4fb5 167 TIGRFAM TIGR00086 smpB: SsrA-binding protein 19 160 1.7E-51 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 APY29_RS20805 3072c727a91fd6c7fd0568a1a561bd24 514 Pfam PF00361 Proton-conducting membrane transporter 129 417 3.5E-31 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS20805 3072c727a91fd6c7fd0568a1a561bd24 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 163 187 1.7E-6 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS20805 3072c727a91fd6c7fd0568a1a561bd24 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 381 407 1.7E-6 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS20805 3072c727a91fd6c7fd0568a1a561bd24 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 1.7E-6 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS20805 3072c727a91fd6c7fd0568a1a561bd24 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 236 260 1.7E-6 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS02240 73516cd68b0d463b81fdf09d197c8be3 393 SUPERFAMILY SSF55874 272 374 7.38E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS02240 73516cd68b0d463b81fdf09d197c8be3 393 Pfam PF07730 Histidine kinase 191 257 9.9E-19 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 APY29_RS02240 73516cd68b0d463b81fdf09d197c8be3 393 Gene3D G3DSA:3.30.565.10 251 379 8.9E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS18690 ebdf3429071ee0d72eca6b5aa73b24c8 252 Gene3D G3DSA:3.40.50.300 1 245 9.9E-60 T 28-03-2018 APY29_RS18690 ebdf3429071ee0d72eca6b5aa73b24c8 252 Pfam PF00005 ABC transporter 21 161 5.7E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS18690 ebdf3429071ee0d72eca6b5aa73b24c8 252 SUPERFAMILY SSF52540 13 230 5.21E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS18690 ebdf3429071ee0d72eca6b5aa73b24c8 252 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS18690 ebdf3429071ee0d72eca6b5aa73b24c8 252 SMART SM00382 30 212 3.4E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS03605 e5693321258eb7ffb1927bd036d5003c 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 193 212 1.5E-14 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APY29_RS03605 e5693321258eb7ffb1927bd036d5003c 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 55 77 1.5E-14 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APY29_RS03605 e5693321258eb7ffb1927bd036d5003c 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 136 160 1.5E-14 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APY29_RS03605 e5693321258eb7ffb1927bd036d5003c 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 99 124 1.5E-14 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APY29_RS03605 e5693321258eb7ffb1927bd036d5003c 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 173 192 1.5E-14 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APY29_RS03605 e5693321258eb7ffb1927bd036d5003c 253 Pfam PF01061 ABC-2 type transporter 6 216 5.5E-33 T 28-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 APY29_RS03605 e5693321258eb7ffb1927bd036d5003c 253 PIRSF PIRSF006648 8 252 1.7E-26 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APY29_RS06190 a7c5f6f66325f195a4980fd9895694e4 253 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 16 196 8.5E-27 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 APY29_RS06190 a7c5f6f66325f195a4980fd9895694e4 253 Gene3D G3DSA:3.20.20.60 2 239 3.8E-33 T 28-03-2018 APY29_RS06190 a7c5f6f66325f195a4980fd9895694e4 253 SUPERFAMILY SSF51621 5 240 8.37E-60 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APY29_RS12815 6fac199de9ff7d33cd57dd380d8b074c 207 SUPERFAMILY SSF51161 56 193 3.33E-24 T 28-03-2018 IPR011004 Trimeric LpxA-like APY29_RS12815 6fac199de9ff7d33cd57dd380d8b074c 207 Gene3D G3DSA:2.160.10.10 53 193 7.5E-22 T 28-03-2018 APY29_RS12815 6fac199de9ff7d33cd57dd380d8b074c 207 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 134 168 2.2E-5 T 28-03-2018 IPR001451 Hexapeptide repeat APY29_RS12815 6fac199de9ff7d33cd57dd380d8b074c 207 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 100 130 0.0012 T 28-03-2018 IPR001451 Hexapeptide repeat APY29_RS10655 5740d9918f24867f58c57f2da509e489 616 Pfam PF02254 TrkA-N domain 406 519 9.4E-21 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APY29_RS10655 5740d9918f24867f58c57f2da509e489 616 Gene3D G3DSA:3.40.50.720 400 565 2.2E-18 T 28-03-2018 APY29_RS10655 5740d9918f24867f58c57f2da509e489 616 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 18 289 1.0E-77 T 28-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 APY29_RS10655 5740d9918f24867f58c57f2da509e489 616 Pfam PF00999 Sodium/hydrogen exchanger family 14 378 2.2E-67 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APY29_RS10655 5740d9918f24867f58c57f2da509e489 616 SUPERFAMILY SSF51735 405 533 7.34E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS10655 5740d9918f24867f58c57f2da509e489 616 Gene3D G3DSA:1.20.91.10 234 315 3.1E-10 T 28-03-2018 APY29_RS10130 486aa75d6110e667c9db2a3faa250d4f 518 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 28 484 1.6E-131 T 28-03-2018 IPR003846 Uncharacterised protein family UPF0061 APY29_RS10130 486aa75d6110e667c9db2a3faa250d4f 518 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 2 500 45.595 T 28-03-2018 IPR003846 Uncharacterised protein family UPF0061 APY29_RS14420 a107574374ed2431fd69bc84daa5ba33 114 Gene3D G3DSA:3.40.50.2300 1 114 6.5E-27 T 28-03-2018 APY29_RS14420 a107574374ed2431fd69bc84daa5ba33 114 Pfam PF00072 Response regulator receiver domain 1 110 1.4E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS14420 a107574374ed2431fd69bc84daa5ba33 114 SMART SM00448 1 110 4.9E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS14420 a107574374ed2431fd69bc84daa5ba33 114 SUPERFAMILY SSF52172 1 114 5.83E-28 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS17340 419c4dbe2be8558b882636249046864f 384 SUPERFAMILY SSF48256 17 377 1.44E-122 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 APY29_RS17340 419c4dbe2be8558b882636249046864f 384 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 16 383 1.6E-153 T 28-03-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 APY29_RS17340 419c4dbe2be8558b882636249046864f 384 Pfam PF00285 Citrate synthase, C-terminal domain 17 365 6.7E-113 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 APY29_RS17340 419c4dbe2be8558b882636249046864f 384 ProSitePatterns PS00480 Citrate synthase signature. 266 278 - T 28-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 APY29_RS17340 419c4dbe2be8558b882636249046864f 384 PRINTS PR00143 Citrate synthase signature 336 350 1.3E-36 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 APY29_RS17340 419c4dbe2be8558b882636249046864f 384 PRINTS PR00143 Citrate synthase signature 134 147 1.3E-36 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 APY29_RS17340 419c4dbe2be8558b882636249046864f 384 PRINTS PR00143 Citrate synthase signature 259 279 1.3E-36 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 APY29_RS17340 419c4dbe2be8558b882636249046864f 384 PRINTS PR00143 Citrate synthase signature 184 199 1.3E-36 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 APY29_RS17340 419c4dbe2be8558b882636249046864f 384 PRINTS PR00143 Citrate synthase signature 206 234 1.3E-36 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 APY29_RS17340 419c4dbe2be8558b882636249046864f 384 PRINTS PR00143 Citrate synthase signature 316 332 1.3E-36 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 APY29_RS17340 419c4dbe2be8558b882636249046864f 384 Gene3D G3DSA:1.10.580.10 23 363 3.9E-80 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain APY29_RS17340 419c4dbe2be8558b882636249046864f 384 PIRSF PIRSF001369 10 384 3.6E-110 T 28-03-2018 IPR024176 Citrate synthase, bacterial-type APY29_RS18230 1b7070dc5878dafdcce22a35f8c5a566 425 Pfam PF03631 Virulence factor BrkB 33 279 9.7E-57 T 28-03-2018 IPR017039 Virulence factor BrkB APY29_RS18230 1b7070dc5878dafdcce22a35f8c5a566 425 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 14 309 21.374 T 28-03-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial APY29_RS18230 1b7070dc5878dafdcce22a35f8c5a566 425 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 22 281 1.2E-72 T 28-03-2018 IPR017039 Virulence factor BrkB APY29_RS05105 e41a1b509425a44a0976c221a79c5488 219 SUPERFAMILY SSF56112 15 148 3.05E-15 T 28-03-2018 IPR011009 Protein kinase-like domain APY29_RS05105 e41a1b509425a44a0976c221a79c5488 219 Gene3D G3DSA:3.90.1200.10 24 200 4.7E-11 T 28-03-2018 APY29_RS08885 3218bc32f6e4739a4b008fcf04c3be61 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 1.5E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS08885 3218bc32f6e4739a4b008fcf04c3be61 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 1.5E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS08885 3218bc32f6e4739a4b008fcf04c3be61 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 1.5E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS08885 3218bc32f6e4739a4b008fcf04c3be61 247 Pfam PF00106 short chain dehydrogenase 16 209 3.2E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS08885 3218bc32f6e4739a4b008fcf04c3be61 247 SUPERFAMILY SSF51735 13 243 6.96E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS08885 3218bc32f6e4739a4b008fcf04c3be61 247 Gene3D G3DSA:3.40.50.720 4 245 3.3E-44 T 28-03-2018 APY29_RS08885 3218bc32f6e4739a4b008fcf04c3be61 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 16 203 0.0078 T 28-03-2018 APY29_RS12610 74cfcaddadb33d0617d3323036d17ae9 204 Pfam PF04356 Protein of unknown function (DUF489) 8 196 6.6E-60 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 APY29_RS12610 74cfcaddadb33d0617d3323036d17ae9 204 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 204 30.543 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 APY29_RS12610 74cfcaddadb33d0617d3323036d17ae9 204 SUPERFAMILY SSF101322 3 203 4.58E-61 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 APY29_RS12610 74cfcaddadb33d0617d3323036d17ae9 204 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 25 195 3.0E-80 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 APY29_RS12610 74cfcaddadb33d0617d3323036d17ae9 204 Gene3D G3DSA:1.10.3890.10 4 204 1.5E-60 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 APY29_RS22635 8f286933d950cc08b799e3430324b453 52 PIRSF PIRSF037205 1 52 4.9E-26 T 28-03-2018 IPR017136 Uncharacterised conserved protein UCP037205 APY29_RS22635 8f286933d950cc08b799e3430324b453 52 Gene3D G3DSA:3.30.50.10 7 50 2.1E-11 T 28-03-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 APY29_RS22635 8f286933d950cc08b799e3430324b453 52 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 5 43 1.2E-22 T 28-03-2018 IPR017136 Uncharacterised conserved protein UCP037205 APY29_RS20710 e00db8f6d7dfa4e74f2c7b06edd7b455 210 Pfam PF01613 Flavin reductase like domain 30 174 7.0E-14 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 APY29_RS20710 e00db8f6d7dfa4e74f2c7b06edd7b455 210 Gene3D G3DSA:2.30.110.10 18 196 4.8E-42 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 APY29_RS20710 e00db8f6d7dfa4e74f2c7b06edd7b455 210 SUPERFAMILY SSF50475 7 195 1.23E-47 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 APY29_RS20710 e00db8f6d7dfa4e74f2c7b06edd7b455 210 SMART SM00903 28 179 2.3E-9 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 APY29_RS13515 e56106e314de48f5c6d65491c9d00db8 481 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 454 6.2E-120 T 28-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 APY29_RS13515 e56106e314de48f5c6d65491c9d00db8 481 Gene3D G3DSA:3.30.930.10 1 367 1.1E-86 T 28-03-2018 APY29_RS13515 e56106e314de48f5c6d65491c9d00db8 481 SUPERFAMILY SSF55681 4 365 2.3E-71 T 28-03-2018 APY29_RS13515 e56106e314de48f5c6d65491c9d00db8 481 Pfam PF03129 Anticodon binding domain 375 463 3.3E-13 T 28-03-2018 IPR004154 Anticodon-binding APY29_RS13515 e56106e314de48f5c6d65491c9d00db8 481 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 464 28.787 T 28-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 APY29_RS13515 e56106e314de48f5c6d65491c9d00db8 481 Pfam PF13393 Histidyl-tRNA synthetase 90 356 2.9E-28 T 28-03-2018 APY29_RS13515 e56106e314de48f5c6d65491c9d00db8 481 SUPERFAMILY SSF52954 372 463 7.2E-21 T 28-03-2018 IPR004154 Anticodon-binding APY29_RS13515 e56106e314de48f5c6d65491c9d00db8 481 PIRSF PIRSF001549 1 466 1.3E-138 T 28-03-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 APY29_RS13515 e56106e314de48f5c6d65491c9d00db8 481 Gene3D G3DSA:3.40.50.800 371 470 9.9E-21 T 28-03-2018 IPR004154 Anticodon-binding APY29_RS02675 355b1d2bb8c4718679fdf5c07767965a 198 Gene3D G3DSA:2.60.370.10 63 181 1.3E-42 T 28-03-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02675 355b1d2bb8c4718679fdf5c07767965a 198 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 31 177 4.0E-46 T 28-03-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02675 355b1d2bb8c4718679fdf5c07767965a 198 PIRSF PIRSF005413 2 193 9.8E-60 T 28-03-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02675 355b1d2bb8c4718679fdf5c07767965a 198 SUPERFAMILY SSF110111 64 179 8.11E-45 T 28-03-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS18665 12a8a8876b7cfebf1bf10e9ec0984352 747 Gene3D G3DSA:2.40.170.20 226 747 1.7E-50 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS18665 12a8a8876b7cfebf1bf10e9ec0984352 747 Pfam PF07715 TonB-dependent Receptor Plug Domain 106 216 6.2E-12 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS18665 12a8a8876b7cfebf1bf10e9ec0984352 747 Pfam PF00593 TonB dependent receptor 286 746 1.8E-31 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS18665 12a8a8876b7cfebf1bf10e9ec0984352 747 SUPERFAMILY SSF56935 81 747 7.69E-84 T 28-03-2018 APY29_RS18665 12a8a8876b7cfebf1bf10e9ec0984352 747 Gene3D G3DSA:2.170.130.10 76 225 8.2E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS17110 e0ad2892c2170ce0faf9fa4a43debdd8 326 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.7E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17110 e0ad2892c2170ce0faf9fa4a43debdd8 326 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.7E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17110 e0ad2892c2170ce0faf9fa4a43debdd8 326 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.7E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17110 e0ad2892c2170ce0faf9fa4a43debdd8 326 Pfam PF00106 short chain dehydrogenase 8 193 1.2E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17110 e0ad2892c2170ce0faf9fa4a43debdd8 326 SUPERFAMILY SSF51735 7 263 3.18E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS17110 e0ad2892c2170ce0faf9fa4a43debdd8 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.6E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17110 e0ad2892c2170ce0faf9fa4a43debdd8 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.6E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17110 e0ad2892c2170ce0faf9fa4a43debdd8 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.6E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17110 e0ad2892c2170ce0faf9fa4a43debdd8 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.6E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17110 e0ad2892c2170ce0faf9fa4a43debdd8 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.6E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS17110 e0ad2892c2170ce0faf9fa4a43debdd8 326 Gene3D G3DSA:3.40.50.720 2 266 5.8E-47 T 28-03-2018 APY29_RS15510 d3ab7f15a838dfbd6258051ce1f8d661 521 SUPERFAMILY SSF103473 285 514 3.4E-17 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS15510 d3ab7f15a838dfbd6258051ce1f8d661 521 SUPERFAMILY SSF103473 58 217 3.4E-17 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS15510 d3ab7f15a838dfbd6258051ce1f8d661 521 Pfam PF00854 POT family 297 462 2.1E-38 T 28-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 APY29_RS15510 d3ab7f15a838dfbd6258051ce1f8d661 521 Pfam PF00854 POT family 91 216 7.3E-35 T 28-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 APY29_RS15510 d3ab7f15a838dfbd6258051ce1f8d661 521 Gene3D G3DSA:1.20.1250.20 300 515 7.1E-5 T 28-03-2018 APY29_RS15510 d3ab7f15a838dfbd6258051ce1f8d661 521 Gene3D G3DSA:1.20.1250.20 18 210 2.8E-22 T 28-03-2018 APY29_RS15510 d3ab7f15a838dfbd6258051ce1f8d661 521 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 80 104 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 APY29_RS15510 d3ab7f15a838dfbd6258051ce1f8d661 521 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 16 493 1.5E-45 T 28-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 APY29_RS19475 5b5ef723545ba854544b0233d00ff397 126 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 33 2.7E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS19475 5b5ef723545ba854544b0233d00ff397 126 Pfam PF02501 Type II secretion system (T2SS), protein I 46 122 2.2E-17 T 28-03-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 APY29_RS19475 5b5ef723545ba854544b0233d00ff397 126 SUPERFAMILY SSF54523 45 121 1.41E-15 T 28-03-2018 APY29_RS19475 5b5ef723545ba854544b0233d00ff397 126 Gene3D G3DSA:3.30.1300.30 37 126 1.9E-17 T 28-03-2018 APY29_RS19475 5b5ef723545ba854544b0233d00ff397 126 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS19475 5b5ef723545ba854544b0233d00ff397 126 TIGRFAM TIGR01707 gspI: type II secretion system protein I 12 109 1.7E-22 T 28-03-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 APY29_RS19475 5b5ef723545ba854544b0233d00ff397 126 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 32 2.4E-5 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS03560 c146e6712f6c4c0d490c5c3a8dcb425c 298 SUPERFAMILY SSF46785 4 84 4.14E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS03560 c146e6712f6c4c0d490c5c3a8dcb425c 298 SUPERFAMILY SSF53850 89 294 2.35E-49 T 28-03-2018 APY29_RS03560 c146e6712f6c4c0d490c5c3a8dcb425c 298 Pfam PF03466 LysR substrate binding domain 89 290 7.6E-48 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS03560 c146e6712f6c4c0d490c5c3a8dcb425c 298 Gene3D G3DSA:1.10.10.10 2 84 8.7E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS03560 c146e6712f6c4c0d490c5c3a8dcb425c 298 Gene3D G3DSA:3.40.190.10 86 176 3.4E-21 T 28-03-2018 APY29_RS03560 c146e6712f6c4c0d490c5c3a8dcb425c 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.1E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS03560 c146e6712f6c4c0d490c5c3a8dcb425c 298 Gene3D G3DSA:3.40.190.10 177 263 2.4E-30 T 28-03-2018 APY29_RS05960 1b21a8ed4cfa788431ac4eb8674731e4 552 Pfam PF02540 NAD synthase 276 525 4.6E-69 T 28-03-2018 IPR022310 NAD/GMP synthase APY29_RS05960 1b21a8ed4cfa788431ac4eb8674731e4 552 SUPERFAMILY SSF56317 10 251 1.7E-58 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APY29_RS05960 1b21a8ed4cfa788431ac4eb8674731e4 552 Gene3D G3DSA:3.60.110.10 5 255 3.7E-60 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APY29_RS05960 1b21a8ed4cfa788431ac4eb8674731e4 552 Gene3D G3DSA:3.40.50.620 273 552 7.9E-65 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS05960 1b21a8ed4cfa788431ac4eb8674731e4 552 SUPERFAMILY SSF52402 275 534 5.51E-76 T 28-03-2018 APY29_RS05960 1b21a8ed4cfa788431ac4eb8674731e4 552 Pfam PF00795 Carbon-nitrogen hydrolase 13 242 5.0E-23 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APY29_RS05960 1b21a8ed4cfa788431ac4eb8674731e4 552 PIRSF PIRSF006630 8 552 8.4E-183 T 28-03-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 APY29_RS05960 1b21a8ed4cfa788431ac4eb8674731e4 552 TIGRFAM TIGR00552 nadE: NAD+ synthetase 283 532 5.0E-58 T 28-03-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 APY29_RS16185 227a4c5c909268189ce39c3c313cd112 206 Gene3D G3DSA:1.10.1740.10 3 120 1.9E-27 T 28-03-2018 APY29_RS16185 227a4c5c909268189ce39c3c313cd112 206 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 186 2.7E-30 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS16185 227a4c5c909268189ce39c3c313cd112 206 SUPERFAMILY SSF88946 10 110 1.57E-28 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS16185 227a4c5c909268189ce39c3c313cd112 206 Pfam PF08281 Sigma-70, region 4 134 185 6.1E-18 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS16185 227a4c5c909268189ce39c3c313cd112 206 SUPERFAMILY SSF88659 127 186 1.79E-17 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS16185 227a4c5c909268189ce39c3c313cd112 206 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 6 194 4.5E-107 T 28-03-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS16185 227a4c5c909268189ce39c3c313cd112 206 Pfam PF04542 Sigma-70 region 2 29 96 2.6E-16 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APY29_RS16185 227a4c5c909268189ce39c3c313cd112 206 Gene3D G3DSA:1.10.10.10 121 193 3.7E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS02205 3213de7be6808eda608c3c5f9246f0f1 298 SUPERFAMILY SSF103481 205 295 1.96E-14 T 28-03-2018 APY29_RS02205 3213de7be6808eda608c3c5f9246f0f1 298 Pfam PF00892 EamA-like transporter family 159 292 9.5E-19 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 APY29_RS02205 3213de7be6808eda608c3c5f9246f0f1 298 Pfam PF00892 EamA-like transporter family 17 148 2.0E-11 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 APY29_RS02205 3213de7be6808eda608c3c5f9246f0f1 298 SUPERFAMILY SSF103481 52 152 5.62E-10 T 28-03-2018 APY29_RS01330 0878d53117872fcf5e8e7f17366d3e42 472 Pfam PF13396 Phospholipase_D-nuclease N-terminal 25 57 1.4E-4 T 28-03-2018 IPR027379 Cardiolipin synthase N-terminal APY29_RS01330 0878d53117872fcf5e8e7f17366d3e42 472 SMART SM00155 214 241 0.071 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 APY29_RS01330 0878d53117872fcf5e8e7f17366d3e42 472 SMART SM00155 385 412 1.1 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 APY29_RS01330 0878d53117872fcf5e8e7f17366d3e42 472 Gene3D G3DSA:3.30.870.10 97 282 1.4E-28 T 28-03-2018 APY29_RS01330 0878d53117872fcf5e8e7f17366d3e42 472 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 18 469 2.5E-98 T 28-03-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 APY29_RS01330 0878d53117872fcf5e8e7f17366d3e42 472 SUPERFAMILY SSF56024 263 459 4.93E-46 T 28-03-2018 APY29_RS01330 0878d53117872fcf5e8e7f17366d3e42 472 Pfam PF13091 PLD-like domain 130 271 5.8E-18 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 APY29_RS01330 0878d53117872fcf5e8e7f17366d3e42 472 Pfam PF13091 PLD-like domain 315 435 6.6E-23 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 APY29_RS01330 0878d53117872fcf5e8e7f17366d3e42 472 Gene3D G3DSA:3.30.870.10 304 472 1.8E-24 T 28-03-2018 APY29_RS01330 0878d53117872fcf5e8e7f17366d3e42 472 SUPERFAMILY SSF56024 105 301 4.97E-45 T 28-03-2018 APY29_RS16360 e54be99612aadf9d7d6c82c297d42ed0 356 SUPERFAMILY SSF51412 12 352 4.12E-49 T 28-03-2018 APY29_RS16360 e54be99612aadf9d7d6c82c297d42ed0 356 Pfam PF03060 Nitronate monooxygenase 19 345 9.1E-61 T 28-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 APY29_RS16360 e54be99612aadf9d7d6c82c297d42ed0 356 Gene3D G3DSA:3.20.20.70 3 356 3.9E-43 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS10775 d33c87884ede14c0f324f4159f1b0784 245 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 12 243 4.4E-64 T 28-03-2018 IPR014147 Type IV conjugative transfer protein TrbJ APY29_RS10775 d33c87884ede14c0f324f4159f1b0784 245 Gene3D G3DSA:1.20.58.430 29 220 2.5E-32 T 28-03-2018 APY29_RS20590 30426da3c96befa0932c95a75a7715d3 296 Pfam PF03186 CobD/Cbib protein 9 166 5.8E-10 T 28-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 APY29_RS09035 1335f0d331eade9d1fad167556c23289 270 Gene3D G3DSA:1.20.141.10 110 207 1.6E-10 T 28-03-2018 APY29_RS09035 1335f0d331eade9d1fad167556c23289 270 Gene3D G3DSA:1.10.101.10 48 109 3.4E-18 T 28-03-2018 IPR002477 Peptidoglycan binding-like APY29_RS09035 1335f0d331eade9d1fad167556c23289 270 Pfam PF01471 Putative peptidoglycan binding domain 58 119 7.4E-14 T 28-03-2018 IPR002477 Peptidoglycan binding-like APY29_RS09035 1335f0d331eade9d1fad167556c23289 270 SUPERFAMILY SSF47090 51 121 1.1E-17 T 28-03-2018 IPR002477 Peptidoglycan binding-like APY29_RS17550 dbeaa1e16064a15106232cae1ec0a519 150 Pfam PF00075 RNase H 2 140 2.6E-46 T 28-03-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 APY29_RS17550 dbeaa1e16064a15106232cae1ec0a519 150 Gene3D G3DSA:3.30.420.10 1 148 7.6E-49 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS17550 dbeaa1e16064a15106232cae1ec0a519 150 Hamap MF_00042 Ribonuclease H [rnhA]. 1 149 36.466 T 28-03-2018 IPR022892 Ribonuclease HI GO:0004523 APY29_RS17550 dbeaa1e16064a15106232cae1ec0a519 150 SUPERFAMILY SSF53098 2 138 3.79E-54 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS05445 0813ad75bd762f118657285d11b33559 652 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 366 530 2.4E-38 T 28-03-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain APY29_RS05445 0813ad75bd762f118657285d11b33559 652 Gene3D G3DSA:3.40.1080.10 2 219 3.7E-13 T 28-03-2018 APY29_RS05445 0813ad75bd762f118657285d11b33559 652 SUPERFAMILY SSF100950 224 268 4.76E-42 T 28-03-2018 APY29_RS05445 0813ad75bd762f118657285d11b33559 652 SUPERFAMILY SSF100950 301 550 4.76E-42 T 28-03-2018 APY29_RS05445 0813ad75bd762f118657285d11b33559 652 Gene3D G3DSA:3.40.1080.10 229 544 1.6E-65 T 28-03-2018 APY29_RS06025 4e42b376fa3696eabe0c8a698f6a4be3 811 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 41 - T 28-03-2018 IPR010916 TonB box, conserved site APY29_RS06025 4e42b376fa3696eabe0c8a698f6a4be3 811 Gene3D G3DSA:2.170.130.10 24 170 2.1E-27 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS06025 4e42b376fa3696eabe0c8a698f6a4be3 811 Gene3D G3DSA:2.40.170.20 171 811 1.4E-65 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS06025 4e42b376fa3696eabe0c8a698f6a4be3 811 Pfam PF00593 TonB dependent receptor 293 797 1.9E-41 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS06025 4e42b376fa3696eabe0c8a698f6a4be3 811 SUPERFAMILY SSF56935 34 811 1.25E-104 T 28-03-2018 APY29_RS06025 4e42b376fa3696eabe0c8a698f6a4be3 811 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 171 7.3E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS08545 eb0e26fc1fe6b3b26e8e6eaacd188ec5 104 Gene3D G3DSA:1.10.260.40 47 102 1.6E-10 T 28-03-2018 APY29_RS08545 eb0e26fc1fe6b3b26e8e6eaacd188ec5 104 SMART SM00530 48 102 1.3E-4 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APY29_RS08545 eb0e26fc1fe6b3b26e8e6eaacd188ec5 104 SUPERFAMILY SSF47413 48 101 8.08E-10 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APY29_RS08545 eb0e26fc1fe6b3b26e8e6eaacd188ec5 104 Pfam PF01381 Helix-turn-helix 49 92 1.3E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APY29_RS07855 2f5f1ba61eeab16359cecb4c65d06be8 482 Gene3D G3DSA:3.30.565.10 327 482 1.7E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS07855 2f5f1ba61eeab16359cecb4c65d06be8 482 Pfam PF00672 HAMP domain 207 254 2.9E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS07855 2f5f1ba61eeab16359cecb4c65d06be8 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 461 2.8E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS07855 2f5f1ba61eeab16359cecb4c65d06be8 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 437 2.8E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS07855 2f5f1ba61eeab16359cecb4c65d06be8 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 2.8E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS07855 2f5f1ba61eeab16359cecb4c65d06be8 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 480 2.8E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS07855 2f5f1ba61eeab16359cecb4c65d06be8 482 Gene3D G3DSA:3.30.450.20 26 185 1.6E-22 T 28-03-2018 APY29_RS07855 2f5f1ba61eeab16359cecb4c65d06be8 482 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 321 1.1E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS07855 2f5f1ba61eeab16359cecb4c65d06be8 482 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 480 2.2E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS07855 2f5f1ba61eeab16359cecb4c65d06be8 482 SMART SM00388 258 323 2.2E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS07855 2f5f1ba61eeab16359cecb4c65d06be8 482 Gene3D G3DSA:1.10.287.130 242 318 4.1E-11 T 28-03-2018 APY29_RS07855 2f5f1ba61eeab16359cecb4c65d06be8 482 SMART SM00304 207 258 2.7E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS07855 2f5f1ba61eeab16359cecb4c65d06be8 482 SUPERFAMILY SSF47384 251 322 5.89E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS07855 2f5f1ba61eeab16359cecb4c65d06be8 482 SMART SM00387 372 482 1.3E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS07855 2f5f1ba61eeab16359cecb4c65d06be8 482 SUPERFAMILY SSF55874 312 481 6.81E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS07855 2f5f1ba61eeab16359cecb4c65d06be8 482 SUPERFAMILY SSF103190 79 180 2.94E-8 T 28-03-2018 IPR029151 Periplasmic sensor domain-like APY29_RS01615 d08bca366b1ce47a2b3816b64a6b74d1 449 Gene3D G3DSA:3.30.9.10 175 338 4.0E-19 T 28-03-2018 APY29_RS01615 d08bca366b1ce47a2b3816b64a6b74d1 449 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 14 36 2.1E-7 T 28-03-2018 APY29_RS01615 d08bca366b1ce47a2b3816b64a6b74d1 449 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 291 306 2.1E-7 T 28-03-2018 APY29_RS01615 d08bca366b1ce47a2b3816b64a6b74d1 449 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 161 176 2.1E-7 T 28-03-2018 APY29_RS01615 d08bca366b1ce47a2b3816b64a6b74d1 449 Gene3D G3DSA:3.50.50.60 13 174 1.5E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS01615 d08bca366b1ce47a2b3816b64a6b74d1 449 Pfam PF01494 FAD binding domain 14 319 2.2E-17 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 APY29_RS01615 d08bca366b1ce47a2b3816b64a6b74d1 449 SUPERFAMILY SSF51905 287 357 6.05E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS01615 d08bca366b1ce47a2b3816b64a6b74d1 449 SUPERFAMILY SSF51905 13 182 6.05E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS00365 2ed424d7b95223af1315e533e646a73b 576 SUPERFAMILY SSF90123 14 325 4.71E-26 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS00365 2ed424d7b95223af1315e533e646a73b 576 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS00365 2ed424d7b95223af1315e533e646a73b 576 SUPERFAMILY SSF52540 338 567 5.61E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS00365 2ed424d7b95223af1315e533e646a73b 576 Pfam PF00664 ABC transporter transmembrane region 16 289 2.5E-10 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS00365 2ed424d7b95223af1315e533e646a73b 576 Gene3D G3DSA:3.40.50.300 336 569 1.2E-60 T 28-03-2018 APY29_RS00365 2ed424d7b95223af1315e533e646a73b 576 SMART SM00382 373 558 4.3E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS00365 2ed424d7b95223af1315e533e646a73b 576 Gene3D G3DSA:1.20.1560.10 1 326 2.5E-17 T 28-03-2018 APY29_RS00365 2ed424d7b95223af1315e533e646a73b 576 Pfam PF00005 ABC transporter 364 512 5.0E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS04225 29a94ccb9f71b1586fc878ae2ec0a6c2 314 Pfam PF01012 Electron transfer flavoprotein domain 4 174 4.2E-33 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 APY29_RS04225 29a94ccb9f71b1586fc878ae2ec0a6c2 314 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 257 283 - T 28-03-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 APY29_RS04225 29a94ccb9f71b1586fc878ae2ec0a6c2 314 SUPERFAMILY SSF52402 3 177 1.05E-42 T 28-03-2018 APY29_RS04225 29a94ccb9f71b1586fc878ae2ec0a6c2 314 Gene3D G3DSA:3.40.50.1220 189 314 2.6E-56 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain APY29_RS04225 29a94ccb9f71b1586fc878ae2ec0a6c2 314 SUPERFAMILY SSF52467 191 310 1.06E-46 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain APY29_RS04225 29a94ccb9f71b1586fc878ae2ec0a6c2 314 PIRSF PIRSF000089 1 314 1.6E-104 T 28-03-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 APY29_RS04225 29a94ccb9f71b1586fc878ae2ec0a6c2 314 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 194 276 3.5E-35 T 28-03-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 APY29_RS04225 29a94ccb9f71b1586fc878ae2ec0a6c2 314 SMART SM00893 4 186 4.4E-37 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 APY29_RS04225 29a94ccb9f71b1586fc878ae2ec0a6c2 314 Gene3D G3DSA:3.40.50.620 1 181 7.3E-33 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS20955 d3bc146a3e1d9a3eba9b50847f2cf186 210 Pfam PF13460 NAD(P)H-binding 7 192 3.0E-8 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS20955 d3bc146a3e1d9a3eba9b50847f2cf186 210 Gene3D G3DSA:3.40.50.720 2 209 4.1E-18 T 28-03-2018 APY29_RS20955 d3bc146a3e1d9a3eba9b50847f2cf186 210 SUPERFAMILY SSF51735 1 201 5.18E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS18120 3568b3c514d4996b8e9b06f13ee07783 135 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 80 133 6.0E-21 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APY29_RS18120 3568b3c514d4996b8e9b06f13ee07783 135 PRINTS PR01650 Bacterial translocase SecE signature 99 119 4.1E-15 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APY29_RS18120 3568b3c514d4996b8e9b06f13ee07783 135 PRINTS PR01650 Bacterial translocase SecE signature 75 95 4.1E-15 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APY29_RS18120 3568b3c514d4996b8e9b06f13ee07783 135 PRINTS PR01650 Bacterial translocase SecE signature 54 75 4.1E-15 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APY29_RS18120 3568b3c514d4996b8e9b06f13ee07783 135 Hamap MF_00422 Protein translocase subunit SecE [secE]. 76 131 12.419 T 28-03-2018 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 APY29_RS18120 3568b3c514d4996b8e9b06f13ee07783 135 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 80 132 2.2E-19 T 28-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 APY29_RS18120 3568b3c514d4996b8e9b06f13ee07783 135 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 81 109 - T 28-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 APY29_RS18120 3568b3c514d4996b8e9b06f13ee07783 135 Gene3D G3DSA:1.20.5.1030 78 129 1.5E-19 T 28-03-2018 APY29_RS19355 926a55d066bfba1194105e6fdd1a6922 246 Gene3D G3DSA:1.10.760.10 13 112 4.2E-21 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS19355 926a55d066bfba1194105e6fdd1a6922 246 Gene3D G3DSA:1.10.760.10 116 226 2.6E-21 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS19355 926a55d066bfba1194105e6fdd1a6922 246 PIRSF PIRSF000005 3 228 2.1E-63 T 28-03-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 APY29_RS19355 926a55d066bfba1194105e6fdd1a6922 246 SUPERFAMILY SSF46626 42 114 5.09E-18 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS19355 926a55d066bfba1194105e6fdd1a6922 246 SUPERFAMILY SSF46626 130 228 2.87E-19 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS19355 926a55d066bfba1194105e6fdd1a6922 246 Pfam PF00034 Cytochrome c 37 113 2.4E-7 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS19355 926a55d066bfba1194105e6fdd1a6922 246 Pfam PF00034 Cytochrome c 145 226 9.5E-10 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS00060 db8d0e61d238b46a8131f7960fceca83 255 SUPERFAMILY SSF63892 2 249 5.75E-78 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 APY29_RS00060 db8d0e61d238b46a8131f7960fceca83 255 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 5 248 1.7E-64 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 APY29_RS00060 db8d0e61d238b46a8131f7960fceca83 255 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 4 247 7.6E-84 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 APY29_RS00060 db8d0e61d238b46a8131f7960fceca83 255 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 253 85.96 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 APY29_RS00060 db8d0e61d238b46a8131f7960fceca83 255 Gene3D G3DSA:3.20.20.70 3 248 2.6E-88 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS21375 866d3b904124aba131c7efba09cc1077 419 TIGRFAM TIGR00277 HDIG: HDIG domain 178 268 2.4E-10 T 28-03-2018 IPR006675 HDIG domain APY29_RS21375 866d3b904124aba131c7efba09cc1077 419 Pfam PF11871 Domain of unknown function (DUF3391) 3 147 2.4E-28 T 28-03-2018 IPR021812 Protein of unknown function DUF3391 APY29_RS21375 866d3b904124aba131c7efba09cc1077 419 Gene3D G3DSA:1.10.3210.10 125 340 1.0E-42 T 28-03-2018 APY29_RS21375 866d3b904124aba131c7efba09cc1077 419 SMART SM00471 174 310 1.3E-11 T 28-03-2018 IPR003607 HD/PDEase domain APY29_RS21375 866d3b904124aba131c7efba09cc1077 419 SUPERFAMILY SSF109604 172 338 3.14E-30 T 28-03-2018 APY29_RS21375 866d3b904124aba131c7efba09cc1077 419 Pfam PF13487 HD domain 229 291 8.7E-16 T 28-03-2018 APY29_RS00215 fbe6d9d0802149ce62c768e119710e11 350 Gene3D G3DSA:3.20.20.80 32 345 5.0E-53 T 28-03-2018 APY29_RS00215 fbe6d9d0802149ce62c768e119710e11 350 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 63 314 1.7E-51 T 28-03-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 APY29_RS00215 fbe6d9d0802149ce62c768e119710e11 350 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 160 169 - T 28-03-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 APY29_RS00215 fbe6d9d0802149ce62c768e119710e11 350 SUPERFAMILY SSF51445 36 341 1.41E-78 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS20640 33867e51bc6739a5d49a4fc893ebe1d8 156 Gene3D G3DSA:1.20.1260.10 1 78 3.3E-17 T 28-03-2018 IPR012347 Ferritin-related APY29_RS20640 33867e51bc6739a5d49a4fc893ebe1d8 156 Gene3D G3DSA:1.20.5.420 85 138 1.1E-22 T 28-03-2018 APY29_RS20640 33867e51bc6739a5d49a4fc893ebe1d8 156 PIRSF PIRSF002560 1 156 5.1E-71 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APY29_RS20640 33867e51bc6739a5d49a4fc893ebe1d8 156 Pfam PF00210 Ferritin-like domain 8 143 1.9E-39 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APY29_RS20640 33867e51bc6739a5d49a4fc893ebe1d8 156 PRINTS PR00601 Bacterioferritin signature 3 22 6.8E-69 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APY29_RS20640 33867e51bc6739a5d49a4fc893ebe1d8 156 PRINTS PR00601 Bacterioferritin signature 128 149 6.8E-69 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APY29_RS20640 33867e51bc6739a5d49a4fc893ebe1d8 156 PRINTS PR00601 Bacterioferritin signature 44 64 6.8E-69 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APY29_RS20640 33867e51bc6739a5d49a4fc893ebe1d8 156 PRINTS PR00601 Bacterioferritin signature 86 106 6.8E-69 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APY29_RS20640 33867e51bc6739a5d49a4fc893ebe1d8 156 PRINTS PR00601 Bacterioferritin signature 107 127 6.8E-69 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APY29_RS20640 33867e51bc6739a5d49a4fc893ebe1d8 156 PRINTS PR00601 Bacterioferritin signature 23 43 6.8E-69 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APY29_RS20640 33867e51bc6739a5d49a4fc893ebe1d8 156 PRINTS PR00601 Bacterioferritin signature 65 85 6.8E-69 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APY29_RS20640 33867e51bc6739a5d49a4fc893ebe1d8 156 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APY29_RS20640 33867e51bc6739a5d49a4fc893ebe1d8 156 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 2.0E-73 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APY29_RS20640 33867e51bc6739a5d49a4fc893ebe1d8 156 SUPERFAMILY SSF47240 1 152 1.77E-54 T 28-03-2018 IPR009078 Ferritin-like superfamily APY29_RS20130 11691bb92eb22e3f373f5e0771d0021a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 4.9E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20130 11691bb92eb22e3f373f5e0771d0021a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 4.9E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20130 11691bb92eb22e3f373f5e0771d0021a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.9E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20130 11691bb92eb22e3f373f5e0771d0021a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 4.9E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20130 11691bb92eb22e3f373f5e0771d0021a 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.9E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20130 11691bb92eb22e3f373f5e0771d0021a 242 Gene3D G3DSA:3.40.50.720 183 237 0.083 T 28-03-2018 APY29_RS20130 11691bb92eb22e3f373f5e0771d0021a 242 Pfam PF00106 short chain dehydrogenase 6 193 4.4E-49 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20130 11691bb92eb22e3f373f5e0771d0021a 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APY29_RS20130 11691bb92eb22e3f373f5e0771d0021a 242 Gene3D G3DSA:3.40.50.720 1 182 7.2E-47 T 28-03-2018 APY29_RS20130 11691bb92eb22e3f373f5e0771d0021a 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.1E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20130 11691bb92eb22e3f373f5e0771d0021a 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.1E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20130 11691bb92eb22e3f373f5e0771d0021a 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.1E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20130 11691bb92eb22e3f373f5e0771d0021a 242 SUPERFAMILY SSF51735 2 235 8.92E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS16095 285e99aec175cb78a3c923ba20996c5f 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 28-03-2018 IPR019844 Cold-shock conserved site APY29_RS16095 285e99aec175cb78a3c923ba20996c5f 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.9E-31 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APY29_RS16095 285e99aec175cb78a3c923ba20996c5f 68 Gene3D G3DSA:2.40.50.140 1 67 1.7E-28 T 28-03-2018 APY29_RS16095 285e99aec175cb78a3c923ba20996c5f 68 SUPERFAMILY SSF50249 1 67 8.14E-25 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS16095 285e99aec175cb78a3c923ba20996c5f 68 PRINTS PR00050 Cold shock protein signature 4 19 1.1E-17 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APY29_RS16095 285e99aec175cb78a3c923ba20996c5f 68 PRINTS PR00050 Cold shock protein signature 25 34 1.1E-17 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APY29_RS16095 285e99aec175cb78a3c923ba20996c5f 68 PRINTS PR00050 Cold shock protein signature 40 58 1.1E-17 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APY29_RS16095 285e99aec175cb78a3c923ba20996c5f 68 SMART SM00357 3 67 4.0E-30 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 APY29_RS16095 285e99aec175cb78a3c923ba20996c5f 68 PIRSF PIRSF002599 1 68 8.9E-25 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 APY29_RS18025 ac6aca5c90535ca860b8c96b69aa72f2 244 Gene3D G3DSA:3.30.1140.32 108 207 3.3E-38 T 28-03-2018 APY29_RS18025 ac6aca5c90535ca860b8c96b69aa72f2 244 SUPERFAMILY SSF54814 2 106 2.25E-37 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 APY29_RS18025 ac6aca5c90535ca860b8c96b69aa72f2 244 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 28-03-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18025 ac6aca5c90535ca860b8c96b69aa72f2 244 Gene3D G3DSA:3.30.300.20 17 107 3.4E-28 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta APY29_RS18025 ac6aca5c90535ca860b8c96b69aa72f2 244 SMART SM00322 60 125 1.5E-10 T 28-03-2018 IPR004087 K Homology domain GO:0003676 APY29_RS18025 ac6aca5c90535ca860b8c96b69aa72f2 244 SUPERFAMILY SSF54821 108 206 1.83E-40 T 28-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18025 ac6aca5c90535ca860b8c96b69aa72f2 244 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 5.2E-40 T 28-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18025 ac6aca5c90535ca860b8c96b69aa72f2 244 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.985 T 28-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 APY29_RS18025 ac6aca5c90535ca860b8c96b69aa72f2 244 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 1.9E-95 T 28-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 APY29_RS18025 ac6aca5c90535ca860b8c96b69aa72f2 244 Pfam PF07650 KH domain 38 111 1.3E-19 T 28-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS22845 72483e70e92e0ad91aabd472836dc6fd 1012 Pfam PF13620 Carboxypeptidase regulatory-like domain 47 103 3.4E-7 T 28-03-2018 APY29_RS22845 72483e70e92e0ad91aabd472836dc6fd 1012 Gene3D G3DSA:2.40.170.20 279 1011 1.5E-54 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS22845 72483e70e92e0ad91aabd472836dc6fd 1012 Gene3D G3DSA:2.60.40.1120 31 129 4.4E-5 T 28-03-2018 APY29_RS22845 72483e70e92e0ad91aabd472836dc6fd 1012 Gene3D G3DSA:2.170.130.10 130 259 8.6E-8 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS22845 72483e70e92e0ad91aabd472836dc6fd 1012 SUPERFAMILY SSF56935 117 329 7.59E-58 T 28-03-2018 APY29_RS22845 72483e70e92e0ad91aabd472836dc6fd 1012 SUPERFAMILY SSF56935 933 1009 7.59E-58 T 28-03-2018 APY29_RS22845 72483e70e92e0ad91aabd472836dc6fd 1012 SUPERFAMILY SSF56935 731 905 7.59E-58 T 28-03-2018 APY29_RS22845 72483e70e92e0ad91aabd472836dc6fd 1012 SUPERFAMILY SSF56935 630 671 7.59E-58 T 28-03-2018 APY29_RS22845 72483e70e92e0ad91aabd472836dc6fd 1012 SUPERFAMILY SSF56935 356 590 7.59E-58 T 28-03-2018 APY29_RS22845 72483e70e92e0ad91aabd472836dc6fd 1012 SUPERFAMILY SSF49452 31 99 6.87E-7 T 28-03-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 APY29_RS22845 72483e70e92e0ad91aabd472836dc6fd 1012 Pfam PF00593 TonB dependent receptor 404 1010 2.8E-22 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS06965 2eb75c0bcfdf5c42d9112b0dcda56900 187 SUPERFAMILY SSF81342 3 179 2.59E-37 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 APY29_RS06965 2eb75c0bcfdf5c42d9112b0dcda56900 187 Pfam PF01292 Prokaryotic cytochrome b561 8 179 2.8E-31 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 APY29_RS06965 2eb75c0bcfdf5c42d9112b0dcda56900 187 Gene3D G3DSA:1.20.950.20 1 185 1.1E-36 T 28-03-2018 APY29_RS04645 45946fbec472d4cddc5d48b365f2e18a 314 SUPERFAMILY SSF82549 1 306 1.07E-56 T 28-03-2018 APY29_RS04645 45946fbec472d4cddc5d48b365f2e18a 314 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 305 2.4E-37 T 28-03-2018 IPR003797 DegV APY29_RS04645 45946fbec472d4cddc5d48b365f2e18a 314 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 307 3.9E-77 T 28-03-2018 IPR003797 DegV APY29_RS04645 45946fbec472d4cddc5d48b365f2e18a 314 Gene3D G3DSA:3.30.1180.10 170 312 2.6E-19 T 28-03-2018 APY29_RS04645 45946fbec472d4cddc5d48b365f2e18a 314 Gene3D G3DSA:3.40.50.10170 1 169 1.3E-38 T 28-03-2018 APY29_RS14160 9ff66df59fc56930705ad8943720617a 333 SUPERFAMILY SSF51679 4 322 6.54E-80 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APY29_RS14160 9ff66df59fc56930705ad8943720617a 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 323 2.6E-133 T 28-03-2018 IPR019949 Luciferase family oxidoreductase, group 1 APY29_RS14160 9ff66df59fc56930705ad8943720617a 333 Pfam PF00296 Luciferase-like monooxygenase 18 239 4.9E-31 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APY29_RS14160 9ff66df59fc56930705ad8943720617a 333 Gene3D G3DSA:3.20.20.30 7 327 7.6E-68 T 28-03-2018 APY29_RS23005 08059aa8bfe0ec3cf0348ea9583652a3 150 SUPERFAMILY SSF46785 7 144 1.13E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS23005 08059aa8bfe0ec3cf0348ea9583652a3 150 Pfam PF12802 MarR family 43 93 5.9E-10 T 28-03-2018 APY29_RS23005 08059aa8bfe0ec3cf0348ea9583652a3 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site APY29_RS23005 08059aa8bfe0ec3cf0348ea9583652a3 150 SMART SM00347 28 129 7.5E-14 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS23005 08059aa8bfe0ec3cf0348ea9583652a3 150 Gene3D G3DSA:1.10.10.10 1 149 6.5E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS23005 08059aa8bfe0ec3cf0348ea9583652a3 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 6.5E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS23005 08059aa8bfe0ec3cf0348ea9583652a3 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 6.5E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS23005 08059aa8bfe0ec3cf0348ea9583652a3 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 6.5E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS23005 08059aa8bfe0ec3cf0348ea9583652a3 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 6.5E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS05100 2a590afefeb4930011335c2f192fbcc3 695 Pfam PF01569 PAP2 superfamily 355 435 6.6E-11 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APY29_RS05100 2a590afefeb4930011335c2f192fbcc3 695 Gene3D G3DSA:1.20.144.10 296 428 1.8E-6 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APY29_RS05100 2a590afefeb4930011335c2f192fbcc3 695 Pfam PF09335 SNARE associated Golgi protein 39 162 5.4E-19 T 28-03-2018 IPR032816 SNARE associated Golgi protein APY29_RS05100 2a590afefeb4930011335c2f192fbcc3 695 SUPERFAMILY SSF48317 244 444 2.62E-26 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APY29_RS05100 2a590afefeb4930011335c2f192fbcc3 695 Pfam PF14067 LssY C-terminus 499 607 1.5E-9 T 28-03-2018 IPR025902 LssY-like C-terminal domain APY29_RS04185 a2e26992e23d0dba73b833e103c93464 294 Pfam PF01609 Transposase DDE domain 118 257 1.9E-11 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 APY29_RS08890 16a8c8022226174c715000f2581412da 199 Pfam PF01914 MarC family integral membrane protein 3 191 9.6E-48 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 APY29_RS05315 9117c3087091150183e95e085f18b776 80 PRINTS PR01249 Ribosomal protein L31 signature 60 78 7.6E-19 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS05315 9117c3087091150183e95e085f18b776 80 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.6E-19 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS05315 9117c3087091150183e95e085f18b776 80 PRINTS PR01249 Ribosomal protein L31 signature 45 60 7.6E-19 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS05315 9117c3087091150183e95e085f18b776 80 SUPERFAMILY SSF143800 1 79 2.35E-22 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS05315 9117c3087091150183e95e085f18b776 80 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.8E-20 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS05315 9117c3087091150183e95e085f18b776 80 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 24.114 T 28-03-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS05315 9117c3087091150183e95e085f18b776 80 Pfam PF01197 Ribosomal protein L31 1 79 7.1E-29 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS05315 9117c3087091150183e95e085f18b776 80 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18155 1d474936a3672de8e038590481f5e06b 193 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 189 2.1E-57 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APY29_RS18155 1d474936a3672de8e038590481f5e06b 193 SUPERFAMILY SSF53178 5 189 1.19E-64 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APY29_RS18155 1d474936a3672de8e038590481f5e06b 193 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 28-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 APY29_RS18155 1d474936a3672de8e038590481f5e06b 193 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 4.3E-51 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APY29_RS18155 1d474936a3672de8e038590481f5e06b 193 Gene3D G3DSA:3.40.50.1470 1 193 2.1E-65 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APY29_RS18155 1d474936a3672de8e038590481f5e06b 193 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 182 33.717 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APY29_RS05085 fd8dab30d128d513b653f0c140f33bcc 452 Gene3D G3DSA:3.40.1190.10 92 315 7.0E-45 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 APY29_RS05085 fd8dab30d128d513b653f0c140f33bcc 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 387 2.8E-10 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 APY29_RS05085 fd8dab30d128d513b653f0c140f33bcc 452 Gene3D G3DSA:3.40.50.720 2 91 2.1E-7 T 28-03-2018 APY29_RS05085 fd8dab30d128d513b653f0c140f33bcc 452 SUPERFAMILY SSF53623 99 312 2.22E-52 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 APY29_RS05085 fd8dab30d128d513b653f0c140f33bcc 452 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 2 452 55.753 T 28-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 APY29_RS05085 fd8dab30d128d513b653f0c140f33bcc 452 SUPERFAMILY SSF51984 2 90 4.97E-18 T 28-03-2018 APY29_RS05085 fd8dab30d128d513b653f0c140f33bcc 452 Pfam PF01225 Mur ligase family, catalytic domain 4 98 1.1E-13 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 APY29_RS05085 fd8dab30d128d513b653f0c140f33bcc 452 Pfam PF08245 Mur ligase middle domain 109 294 7.6E-25 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 APY29_RS05085 fd8dab30d128d513b653f0c140f33bcc 452 Gene3D G3DSA:3.90.190.20 316 452 1.5E-25 T 28-03-2018 APY29_RS05085 fd8dab30d128d513b653f0c140f33bcc 452 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 3 451 3.1E-186 T 28-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 APY29_RS05085 fd8dab30d128d513b653f0c140f33bcc 452 SUPERFAMILY SSF53244 314 450 7.85E-34 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 APY29_RS06520 d82ac10064f05a92902793129aa213d8 26 TIGRFAM TIGR02107 PQQ_syn_pqqA: coenzyme PQQ precursor peptide PqqA 4 23 3.6E-8 T 28-03-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 APY29_RS06520 d82ac10064f05a92902793129aa213d8 26 Pfam PF08042 PqqA family 3 21 1.6E-7 T 28-03-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 APY29_RS10490 1c12214bdf4962d2a0e9075ce50ec589 214 SUPERFAMILY SSF52540 10 210 4.88E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS10490 1c12214bdf4962d2a0e9075ce50ec589 214 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS10490 1c12214bdf4962d2a0e9075ce50ec589 214 Pfam PF00005 ABC transporter 30 165 1.4E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS10490 1c12214bdf4962d2a0e9075ce50ec589 214 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 12 204 5.1E-70 T 28-03-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 APY29_RS10490 1c12214bdf4962d2a0e9075ce50ec589 214 Gene3D G3DSA:3.40.50.300 4 211 1.0E-36 T 28-03-2018 APY29_RS10490 1c12214bdf4962d2a0e9075ce50ec589 214 SMART SM00382 36 213 9.2E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS19215 9ee8b6773a73aaf0b7a3c7f506518211 379 PIRSF PIRSF001259 1 368 4.1E-115 T 28-03-2018 APY29_RS19215 9ee8b6773a73aaf0b7a3c7f506518211 379 SUPERFAMILY SSF55821 2 202 1.03E-81 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain APY29_RS19215 9ee8b6773a73aaf0b7a3c7f506518211 379 Pfam PF00925 GTP cyclohydrolase II 208 362 3.5E-29 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 APY29_RS19215 9ee8b6773a73aaf0b7a3c7f506518211 379 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 1.9E-80 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 APY29_RS19215 9ee8b6773a73aaf0b7a3c7f506518211 379 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 37.317 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 APY29_RS19215 9ee8b6773a73aaf0b7a3c7f506518211 379 Gene3D G3DSA:3.90.870.10 1 212 4.6E-91 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain APY29_RS19215 9ee8b6773a73aaf0b7a3c7f506518211 379 SUPERFAMILY SSF142695 204 364 2.35E-40 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 APY29_RS19215 9ee8b6773a73aaf0b7a3c7f506518211 379 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 199 1.4E-67 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 APY29_RS02130 cf19724a4d49376ad20964546702be6e 227 Hamap MF_00165 Thymidylate kinase [tmk]. 10 200 21.911 T 28-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 APY29_RS02130 cf19724a4d49376ad20964546702be6e 227 Gene3D G3DSA:3.40.50.300 7 209 2.0E-40 T 28-03-2018 APY29_RS02130 cf19724a4d49376ad20964546702be6e 227 SUPERFAMILY SSF52540 9 198 2.87E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS02130 cf19724a4d49376ad20964546702be6e 227 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 9 189 1.2E-40 T 28-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 APY29_RS02130 cf19724a4d49376ad20964546702be6e 227 Pfam PF02223 Thymidylate kinase 14 190 5.1E-40 T 28-03-2018 APY29_RS22320 96ac6c1e2b5f039374ba45d8b12a2388 490 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 22 274 1.3E-58 T 28-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 APY29_RS22320 96ac6c1e2b5f039374ba45d8b12a2388 490 Gene3D G3DSA:3.40.190.10 161 276 5.8E-15 T 28-03-2018 APY29_RS22320 96ac6c1e2b5f039374ba45d8b12a2388 490 Gene3D G3DSA:3.40.190.10 11 160 6.9E-27 T 28-03-2018 APY29_RS22320 96ac6c1e2b5f039374ba45d8b12a2388 490 SUPERFAMILY SSF53850 22 274 2.86E-55 T 28-03-2018 APY29_RS22320 96ac6c1e2b5f039374ba45d8b12a2388 490 Gene3D G3DSA:1.10.3720.10 281 481 4.0E-27 T 28-03-2018 APY29_RS22320 96ac6c1e2b5f039374ba45d8b12a2388 490 SUPERFAMILY SSF161098 288 470 4.84E-34 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS22320 96ac6c1e2b5f039374ba45d8b12a2388 490 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 312 473 6.4E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS20050 957b29ed649078d14dc64c258dde3106 624 Gene3D G3DSA:1.25.40.10 5 228 2.7E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS20050 957b29ed649078d14dc64c258dde3106 624 SUPERFAMILY SSF48452 212 308 8.85E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS20050 957b29ed649078d14dc64c258dde3106 624 SUPERFAMILY SSF48452 348 386 8.85E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS20050 957b29ed649078d14dc64c258dde3106 624 Pfam PF00990 Diguanylate cyclase, GGDEF domain 464 620 2.3E-37 T 28-03-2018 IPR000160 GGDEF domain APY29_RS20050 957b29ed649078d14dc64c258dde3106 624 SMART SM00267 453 624 7.0E-50 T 28-03-2018 IPR000160 GGDEF domain APY29_RS20050 957b29ed649078d14dc64c258dde3106 624 Gene3D G3DSA:1.25.40.10 242 401 2.2E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS20050 957b29ed649078d14dc64c258dde3106 624 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 460 622 2.5E-37 T 28-03-2018 IPR000160 GGDEF domain APY29_RS20050 957b29ed649078d14dc64c258dde3106 624 Gene3D G3DSA:3.30.70.270 454 624 1.2E-49 T 28-03-2018 APY29_RS20050 957b29ed649078d14dc64c258dde3106 624 SUPERFAMILY SSF55073 469 623 1.65E-40 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS17645 12dd6b6997849ddfcf92a369111fc5b8 253 Pfam PF12811 Bax inhibitor 1 like 23 251 4.1E-78 T 28-03-2018 IPR010539 Protein of unknown function UCP009160 APY29_RS17645 12dd6b6997849ddfcf92a369111fc5b8 253 PIRSF PIRSF009160 1 253 3.8E-100 T 28-03-2018 IPR010539 Protein of unknown function UCP009160 APY29_RS04525 13c9a1f30329535c493da605fccdb929 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 68 9.6E-18 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS04525 13c9a1f30329535c493da605fccdb929 242 Pfam PF07702 UTRA domain 89 227 9.1E-28 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APY29_RS04525 13c9a1f30329535c493da605fccdb929 242 SMART SM00866 89 229 3.8E-31 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APY29_RS04525 13c9a1f30329535c493da605fccdb929 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.7E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS04525 13c9a1f30329535c493da605fccdb929 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.7E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS04525 13c9a1f30329535c493da605fccdb929 242 SUPERFAMILY SSF64288 56 233 1.88E-37 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APY29_RS04525 13c9a1f30329535c493da605fccdb929 242 SUPERFAMILY SSF46785 3 72 2.63E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS04525 13c9a1f30329535c493da605fccdb929 242 Gene3D G3DSA:1.10.10.10 1 67 2.3E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS04525 13c9a1f30329535c493da605fccdb929 242 SMART SM00345 9 68 1.7E-17 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS04525 13c9a1f30329535c493da605fccdb929 242 Gene3D G3DSA:3.40.1410.10 68 236 1.8E-32 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APY29_RS04025 c9148c82f7ff8ea49f4c4900928c20af 359 Pfam PF11799 impB/mucB/samB family C-terminal domain 232 346 3.3E-17 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 APY29_RS04025 c9148c82f7ff8ea49f4c4900928c20af 359 SUPERFAMILY SSF56672 1 233 3.29E-93 T 28-03-2018 APY29_RS04025 c9148c82f7ff8ea49f4c4900928c20af 359 Gene3D G3DSA:3.30.70.270 40 113 1.4E-25 T 28-03-2018 APY29_RS04025 c9148c82f7ff8ea49f4c4900928c20af 359 Gene3D G3DSA:3.30.70.270 114 169 1.3E-21 T 28-03-2018 APY29_RS04025 c9148c82f7ff8ea49f4c4900928c20af 359 Gene3D G3DSA:1.10.150.20 170 244 1.6E-22 T 28-03-2018 APY29_RS04025 c9148c82f7ff8ea49f4c4900928c20af 359 Gene3D G3DSA:3.30.1490.100 245 342 2.5E-20 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 APY29_RS04025 c9148c82f7ff8ea49f4c4900928c20af 359 Hamap MF_01113 DNA polymerase IV [dinB]. 1 351 37.727 T 28-03-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 APY29_RS04025 c9148c82f7ff8ea49f4c4900928c20af 359 SUPERFAMILY SSF100879 238 337 1.81E-20 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 APY29_RS04025 c9148c82f7ff8ea49f4c4900928c20af 359 Pfam PF00817 impB/mucB/samB family 7 153 1.8E-52 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 APY29_RS05535 49ecadcca2883bdef429e836a1c01f88 214 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 178 1.6E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS05535 49ecadcca2883bdef429e836a1c01f88 214 SUPERFAMILY SSF56784 5 212 1.16E-50 T 28-03-2018 IPR023214 HAD-like domain APY29_RS05535 49ecadcca2883bdef429e836a1c01f88 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 184 1.3E-33 T 28-03-2018 IPR023214 HAD-like domain APY29_RS05535 49ecadcca2883bdef429e836a1c01f88 214 Gene3D G3DSA:3.40.50.1000 74 213 3.4E-29 T 28-03-2018 IPR023214 HAD-like domain APY29_RS05535 49ecadcca2883bdef429e836a1c01f88 214 Gene3D G3DSA:1.10.150.240 19 73 3.0E-19 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 APY29_RS12065 de4461158991ccc76712ebb4a421aca2 494 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 479 2.7E-127 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APY29_RS12065 de4461158991ccc76712ebb4a421aca2 494 SUPERFAMILY SSF56954 69 481 1.83E-94 T 28-03-2018 APY29_RS12065 de4461158991ccc76712ebb4a421aca2 494 SUPERFAMILY SSF56954 6 32 1.83E-94 T 28-03-2018 APY29_RS12065 de4461158991ccc76712ebb4a421aca2 494 Pfam PF02321 Outer membrane efflux protein 294 477 1.5E-25 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS12065 de4461158991ccc76712ebb4a421aca2 494 Pfam PF02321 Outer membrane efflux protein 78 266 5.8E-21 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS12065 de4461158991ccc76712ebb4a421aca2 494 Gene3D G3DSA:1.20.1600.10 20 483 1.1E-90 T 28-03-2018 APY29_RS10845 788570ae4687da714006150f62027860 218 SUPERFAMILY SSF52499 11 210 7.85E-49 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APY29_RS10845 788570ae4687da714006150f62027860 218 Gene3D G3DSA:3.40.50.850 8 214 2.0E-36 T 28-03-2018 APY29_RS10845 788570ae4687da714006150f62027860 218 Pfam PF00857 Isochorismatase family 19 169 1.5E-28 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APY29_RS16125 351131784b1a31392ca03f867fec3414 227 SUPERFAMILY SSF52833 1 211 5.53E-46 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS16125 351131784b1a31392ca03f867fec3414 227 Pfam PF01323 DSBA-like thioredoxin domain 2 204 5.5E-39 T 28-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 APY29_RS16125 351131784b1a31392ca03f867fec3414 227 Gene3D G3DSA:3.40.30.10 1 215 2.0E-52 T 28-03-2018 APY29_RS18075 bbbb56170ce93b174fd18d97af35beac 155 Gene3D G3DSA:1.10.455.10 6 155 7.4E-59 T 28-03-2018 IPR023798 Ribosomal protein S7 domain APY29_RS18075 bbbb56170ce93b174fd18d97af35beac 155 SUPERFAMILY SSF47973 3 148 5.49E-57 T 28-03-2018 IPR023798 Ribosomal protein S7 domain APY29_RS18075 bbbb56170ce93b174fd18d97af35beac 155 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 28-03-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS18075 bbbb56170ce93b174fd18d97af35beac 155 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 155 35.363 T 28-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 APY29_RS18075 bbbb56170ce93b174fd18d97af35beac 155 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 3.6E-64 T 28-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 APY29_RS18075 bbbb56170ce93b174fd18d97af35beac 155 Pfam PF00177 Ribosomal protein S7p/S5e 1 148 2.6E-64 T 28-03-2018 IPR023798 Ribosomal protein S7 domain APY29_RS18075 bbbb56170ce93b174fd18d97af35beac 155 PIRSF PIRSF002122 2 155 2.9E-60 T 28-03-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 APY29_RS04450 307a3263aa4e1c9c1f3105bec479fca6 627 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 195 206 - T 28-03-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site APY29_RS04450 307a3263aa4e1c9c1f3105bec479fca6 627 SUPERFAMILY SSF52743 170 226 2.23E-76 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS04450 307a3263aa4e1c9c1f3105bec479fca6 627 SUPERFAMILY SSF52743 255 511 2.23E-76 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS04450 307a3263aa4e1c9c1f3105bec479fca6 627 Pfam PF00082 Subtilase family 190 486 1.1E-48 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS04450 307a3263aa4e1c9c1f3105bec479fca6 627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 190 209 1.2E-20 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS04450 307a3263aa4e1c9c1f3105bec479fca6 627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 443 459 1.2E-20 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS04450 307a3263aa4e1c9c1f3105bec479fca6 627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 258 271 1.2E-20 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS04450 307a3263aa4e1c9c1f3105bec479fca6 627 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 444 454 - T 28-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site APY29_RS04450 307a3263aa4e1c9c1f3105bec479fca6 627 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 547 611 3.6E-13 T 28-03-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial APY29_RS04450 307a3263aa4e1c9c1f3105bec479fca6 627 Gene3D G3DSA:2.60.120.380 518 621 1.3E-11 T 28-03-2018 APY29_RS04450 307a3263aa4e1c9c1f3105bec479fca6 627 Gene3D G3DSA:3.40.50.200 116 514 1.4E-82 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS03600 9cf5a5bf9169b21e87550790ee4d19d7 314 SMART SM00382 30 226 6.5E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS03600 9cf5a5bf9169b21e87550790ee4d19d7 314 Pfam PF00005 ABC transporter 21 163 2.1E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS03600 9cf5a5bf9169b21e87550790ee4d19d7 314 SUPERFAMILY SSF52540 4 227 8.27E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS03600 9cf5a5bf9169b21e87550790ee4d19d7 314 Gene3D G3DSA:3.40.50.300 1 255 1.3E-65 T 28-03-2018 APY29_RS03600 9cf5a5bf9169b21e87550790ee4d19d7 314 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS10930 8f8503c3b19d235a5396e58e468fac64 198 Pfam PF01066 CDP-alcohol phosphatidyltransferase 7 77 4.8E-13 T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APY29_RS10930 8f8503c3b19d235a5396e58e468fac64 198 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 55 77 - T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APY29_RS13680 89cc82181866b3a5d1e9899271b5c433 328 Gene3D G3DSA:3.20.20.80 15 325 3.3E-45 T 28-03-2018 APY29_RS13680 89cc82181866b3a5d1e9899271b5c433 328 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 38 283 4.1E-32 T 28-03-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 APY29_RS13680 89cc82181866b3a5d1e9899271b5c433 328 SUPERFAMILY SSF51445 26 323 1.03E-70 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS13680 89cc82181866b3a5d1e9899271b5c433 328 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 146 155 - T 28-03-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 APY29_RS08835 ebe47785b3d7cfd747337602e12a75a7 308 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 180 4.2E-48 T 28-03-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 APY29_RS08835 ebe47785b3d7cfd747337602e12a75a7 308 SUPERFAMILY SSF55120 9 224 2.88E-71 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS08835 ebe47785b3d7cfd747337602e12a75a7 308 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 299 17.811 T 28-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS08835 ebe47785b3d7cfd747337602e12a75a7 308 SUPERFAMILY SSF88697 244 300 8.45E-7 T 28-03-2018 IPR015947 PUA-like domain APY29_RS08835 ebe47785b3d7cfd747337602e12a75a7 308 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 245 299 1.1E-10 T 28-03-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS08835 ebe47785b3d7cfd747337602e12a75a7 308 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 219 4.0E-67 T 28-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS08835 ebe47785b3d7cfd747337602e12a75a7 308 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 240 2.2E-17 T 28-03-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 APY29_RS08835 ebe47785b3d7cfd747337602e12a75a7 308 Gene3D G3DSA:3.30.2350.10 9 228 1.2E-71 T 28-03-2018 APY29_RS08835 ebe47785b3d7cfd747337602e12a75a7 308 Gene3D G3DSA:2.30.130.10 242 302 7.9E-14 T 28-03-2018 IPR002478 PUA domain GO:0003723 APY29_RS11555 af00ec17c6142c6cfc6222643b165593 309 Pfam PF12101 Protein of unknown function (DUF3577) 5 126 1.1E-37 T 28-03-2018 IPR021960 Protein of unknown function DUF3577 APY29_RS11555 af00ec17c6142c6cfc6222643b165593 309 Pfam PF12101 Protein of unknown function (DUF3577) 131 257 4.7E-49 T 28-03-2018 IPR021960 Protein of unknown function DUF3577 APY29_RS20745 5ce2182b152c5da7d51af1f52b0888db 310 Pfam PF13505 Outer membrane protein beta-barrel domain 10 233 1.2E-11 T 28-03-2018 IPR027385 Outer membrane protein beta-barrel APY29_RS20745 5ce2182b152c5da7d51af1f52b0888db 310 Gene3D G3DSA:2.40.128.130 14 274 5.2E-25 T 28-03-2018 APY29_RS20745 5ce2182b152c5da7d51af1f52b0888db 310 SUPERFAMILY SSF56925 95 234 1.53E-13 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APY29_RS04400 93000a9bf43d88442748638bbf01232d 323 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 23 323 62.636 T 28-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 APY29_RS04400 93000a9bf43d88442748638bbf01232d 323 SUPERFAMILY SSF47823 23 119 8.83E-31 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal APY29_RS04400 93000a9bf43d88442748638bbf01232d 323 Gene3D G3DSA:1.10.443.10 130 317 9.5E-48 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS04400 93000a9bf43d88442748638bbf01232d 323 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 28 322 8.4E-112 T 28-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 APY29_RS04400 93000a9bf43d88442748638bbf01232d 323 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 27 103 7.0E-15 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APY29_RS04400 93000a9bf43d88442748638bbf01232d 323 Pfam PF00589 Phage integrase family 131 308 1.5E-45 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS04400 93000a9bf43d88442748638bbf01232d 323 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 25 323 54.033 T 28-03-2018 IPR023009 Tyrosine recombinase XerC/XerD APY29_RS04400 93000a9bf43d88442748638bbf01232d 323 SUPERFAMILY SSF56349 125 321 3.53E-55 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APY29_RS04400 93000a9bf43d88442748638bbf01232d 323 Gene3D G3DSA:1.10.150.130 23 127 1.3E-18 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal APY29_RS03880 004523e273861145e38c415f9114811c 287 Pfam PF00231 ATP synthase 5 286 8.2E-97 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03880 004523e273861145e38c415f9114811c 287 SUPERFAMILY SSF52943 3 287 1.96E-93 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03880 004523e273861145e38c415f9114811c 287 Gene3D G3DSA:1.10.287.80 239 282 1.7E-14 T 28-03-2018 APY29_RS03880 004523e273861145e38c415f9114811c 287 Gene3D G3DSA:1.10.287.80 2 41 1.5E-16 T 28-03-2018 APY29_RS03880 004523e273861145e38c415f9114811c 287 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 6.2E-38 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03880 004523e273861145e38c415f9114811c 287 PRINTS PR00126 ATP synthase gamma subunit signature 167 184 6.2E-38 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03880 004523e273861145e38c415f9114811c 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 6.2E-38 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03880 004523e273861145e38c415f9114811c 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 6.2E-38 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03880 004523e273861145e38c415f9114811c 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.709 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03880 004523e273861145e38c415f9114811c 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 1.1E-105 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03880 004523e273861145e38c415f9114811c 287 Gene3D G3DSA:3.40.1380.10 42 238 5.9E-75 T 28-03-2018 APY29_RS03880 004523e273861145e38c415f9114811c 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 28-03-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS05150 8e68fa4d9075899617755f66df5d2dae 400 SUPERFAMILY SSF53383 49 369 4.7E-63 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS05150 8e68fa4d9075899617755f66df5d2dae 400 Gene3D G3DSA:3.90.1150.10 258 368 7.7E-15 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS05150 8e68fa4d9075899617755f66df5d2dae 400 Pfam PF00155 Aminotransferase class I and II 53 365 6.2E-39 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APY29_RS05150 8e68fa4d9075899617755f66df5d2dae 400 Gene3D G3DSA:3.40.640.10 75 257 2.0E-26 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS01305 8088e0452d8e74bdf48763dd3cdb0061 340 Pfam PF04909 Amidohydrolase 3 329 4.1E-61 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 APY29_RS01305 8088e0452d8e74bdf48763dd3cdb0061 340 Gene3D G3DSA:3.20.20.140 1 339 2.2E-61 T 28-03-2018 APY29_RS01305 8088e0452d8e74bdf48763dd3cdb0061 340 SUPERFAMILY SSF51556 1 334 7.29E-95 T 28-03-2018 IPR032466 Metal-dependent hydrolase APY29_RS22070 4b814a7c283104f4df2a6a2a45203bb4 158 PIRSF PIRSF029256 5 158 2.2E-61 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APY29_RS22070 4b814a7c283104f4df2a6a2a45203bb4 158 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 6 155 32.737 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APY29_RS22070 4b814a7c283104f4df2a6a2a45203bb4 158 SUPERFAMILY SSF75217 8 156 9.16E-44 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases APY29_RS22070 4b814a7c283104f4df2a6a2a45203bb4 158 Pfam PF00588 SpoU rRNA Methylase family 8 145 2.7E-32 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APY29_RS22070 4b814a7c283104f4df2a6a2a45203bb4 158 Gene3D G3DSA:3.40.1280.10 2 158 4.3E-37 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APY29_RS13185 0fcae3d326d3cdaef53a0cae3a01594c 160 SMART SM00260 9 146 3.0E-45 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS13185 0fcae3d326d3cdaef53a0cae3a01594c 160 Pfam PF01584 CheW-like domain 13 149 9.0E-40 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS13185 0fcae3d326d3cdaef53a0cae3a01594c 160 SUPERFAMILY SSF50341 12 150 3.79E-42 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS13185 0fcae3d326d3cdaef53a0cae3a01594c 160 Gene3D G3DSA:2.30.30.40 95 140 2.8E-19 T 28-03-2018 APY29_RS13185 0fcae3d326d3cdaef53a0cae3a01594c 160 Gene3D G3DSA:2.40.50.180 30 94 8.5E-22 T 28-03-2018 APY29_RS16900 687f472ebeaae4f4cc4caa58ea7a9d0f 417 SUPERFAMILY SSF103473 3 400 4.58E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS16900 687f472ebeaae4f4cc4caa58ea7a9d0f 417 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 369 4.6E-64 T 28-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 APY29_RS16900 687f472ebeaae4f4cc4caa58ea7a9d0f 417 Gene3D G3DSA:1.20.1250.20 204 408 1.7E-20 T 28-03-2018 APY29_RS16900 687f472ebeaae4f4cc4caa58ea7a9d0f 417 Pfam PF07690 Major Facilitator Superfamily 18 352 1.4E-43 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS16900 687f472ebeaae4f4cc4caa58ea7a9d0f 417 Gene3D G3DSA:1.20.1250.20 5 196 3.0E-28 T 28-03-2018 APY29_RS15180 2bf426b581cd721b6ebbf4bdeae53764 302 SUPERFAMILY SSF53613 25 278 5.77E-55 T 28-03-2018 IPR029056 Ribokinase-like APY29_RS15180 2bf426b581cd721b6ebbf4bdeae53764 302 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 24 300 4.5E-50 T 28-03-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 APY29_RS15180 2bf426b581cd721b6ebbf4bdeae53764 302 Gene3D G3DSA:3.40.1190.20 20 293 2.1E-47 T 28-03-2018 IPR029056 Ribokinase-like APY29_RS15180 2bf426b581cd721b6ebbf4bdeae53764 302 Pfam PF08543 Phosphomethylpyrimidine kinase 112 276 6.6E-19 T 28-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 APY29_RS22600 ccc5757a5ff0941c9766fb84c66cb630 731 PIRSF PIRSF029900 16 731 0.0 T 28-03-2018 IPR011395 Alpha glucuronidase GO:0005576|GO:0045493|GO:0046559 APY29_RS22600 ccc5757a5ff0941c9766fb84c66cb630 731 SUPERFAMILY SSF55545 35 175 1.0E-37 T 28-03-2018 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 APY29_RS22600 ccc5757a5ff0941c9766fb84c66cb630 731 SUPERFAMILY SSF51445 177 730 1.05E-250 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS22600 ccc5757a5ff0941c9766fb84c66cb630 731 Gene3D G3DSA:3.20.20.80 175 503 1.7E-157 T 28-03-2018 APY29_RS22600 ccc5757a5ff0941c9766fb84c66cb630 731 Pfam PF07488 Glycosyl hydrolase family 67 middle domain 159 482 2.3E-150 T 28-03-2018 IPR011100 Glycosyl hydrolase family 67, catalytic domain GO:0005576|GO:0045493|GO:0046559 APY29_RS22600 ccc5757a5ff0941c9766fb84c66cb630 731 Gene3D G3DSA:3.30.379.10 49 170 4.9E-20 T 28-03-2018 APY29_RS22600 ccc5757a5ff0941c9766fb84c66cb630 731 Pfam PF07477 Glycosyl hydrolase family 67 C-terminus 484 707 5.2E-96 T 28-03-2018 IPR011099 Glycosyl hydrolase family 67, C-terminal GO:0005576|GO:0045493|GO:0046559 APY29_RS22600 ccc5757a5ff0941c9766fb84c66cb630 731 Gene3D G3DSA:3.90.1330.10 506 722 7.6E-95 T 28-03-2018 IPR011099 Glycosyl hydrolase family 67, C-terminal GO:0005576|GO:0045493|GO:0046559 APY29_RS22600 ccc5757a5ff0941c9766fb84c66cb630 731 Pfam PF03648 Glycosyl hydrolase family 67 N-terminus 40 155 3.4E-25 T 28-03-2018 IPR005154 Alpha glucuronidase, N-terminal GO:0045493|GO:0046559 APY29_RS04250 83f268134cd33d809f71eddc1fa4c826 299 Gene3D G3DSA:3.90.25.10 178 205 2.0E-5 T 28-03-2018 APY29_RS04250 83f268134cd33d809f71eddc1fa4c826 299 Gene3D G3DSA:3.40.50.720 1 177 8.0E-23 T 28-03-2018 APY29_RS04250 83f268134cd33d809f71eddc1fa4c826 299 SUPERFAMILY SSF51735 1 296 1.55E-99 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS04250 83f268134cd33d809f71eddc1fa4c826 299 Gene3D G3DSA:3.90.25.10 206 283 3.3E-25 T 28-03-2018 APY29_RS04250 83f268134cd33d809f71eddc1fa4c826 299 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 4 294 3.1E-107 T 28-03-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 APY29_RS04250 83f268134cd33d809f71eddc1fa4c826 299 Pfam PF04321 RmlD substrate binding domain 1 296 3.7E-108 T 28-03-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 APY29_RS21775 8fddfa94a0d682f32198011340c4615a 233 SUPERFAMILY SSF53474 5 231 2.72E-40 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS21775 8fddfa94a0d682f32198011340c4615a 233 Pfam PF12697 Alpha/beta hydrolase family 9 226 4.2E-12 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS21775 8fddfa94a0d682f32198011340c4615a 233 Gene3D G3DSA:3.40.50.1820 2 232 4.0E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS16210 49ac060e2407aae2cba922c8b1a18508 265 Gene3D G3DSA:3.90.226.10 11 222 2.8E-63 T 28-03-2018 APY29_RS16210 49ac060e2407aae2cba922c8b1a18508 265 SUPERFAMILY SSF52096 12 264 1.64E-78 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS16210 49ac060e2407aae2cba922c8b1a18508 265 Gene3D G3DSA:1.10.12.10 223 265 6.7E-18 T 28-03-2018 IPR014748 Crontonase, C-terminal APY29_RS16210 49ac060e2407aae2cba922c8b1a18508 265 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 APY29_RS16210 49ac060e2407aae2cba922c8b1a18508 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 264 2.6E-55 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APY29_RS21650 058155bcc04781f3fc35c92c1b2b2df0 371 Gene3D G3DSA:3.90.245.10 2 352 6.8E-69 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APY29_RS21650 058155bcc04781f3fc35c92c1b2b2df0 371 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 25 341 4.3E-50 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APY29_RS21650 058155bcc04781f3fc35c92c1b2b2df0 371 SUPERFAMILY SSF53590 11 80 1.96E-58 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APY29_RS21650 058155bcc04781f3fc35c92c1b2b2df0 371 SUPERFAMILY SSF53590 109 350 1.96E-58 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APY29_RS10380 94ce61b4d58ff9a82f47daba865bb8da 86 SUPERFAMILY SSF54909 3 84 7.78E-13 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel APY29_RS10380 94ce61b4d58ff9a82f47daba865bb8da 86 Gene3D G3DSA:3.30.70.1060 1 86 1.8E-12 T 28-03-2018 APY29_RS10380 94ce61b4d58ff9a82f47daba865bb8da 86 Pfam PF03795 YCII-related domain 5 84 2.2E-7 T 28-03-2018 IPR005545 YCII-related APY29_RS01060 69545cf68b89b0d95b7e7176bb2fa828 576 SUPERFAMILY SSF50998 462 566 8.63E-18 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APY29_RS01060 69545cf68b89b0d95b7e7176bb2fa828 576 Gene3D G3DSA:2.140.10.10 58 443 4.2E-65 T 28-03-2018 APY29_RS01060 69545cf68b89b0d95b7e7176bb2fa828 576 Pfam PF13360 PQQ-like domain 232 563 1.1E-14 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat APY29_RS01060 69545cf68b89b0d95b7e7176bb2fa828 576 Pfam PF13360 PQQ-like domain 48 217 6.8E-19 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat APY29_RS01060 69545cf68b89b0d95b7e7176bb2fa828 576 SUPERFAMILY SSF50998 63 494 3.53E-68 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APY29_RS01060 69545cf68b89b0d95b7e7176bb2fa828 576 SMART SM00564 497 529 6.0E-5 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS01060 69545cf68b89b0d95b7e7176bb2fa828 576 SMART SM00564 203 249 0.002 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS01060 69545cf68b89b0d95b7e7176bb2fa828 576 SMART SM00564 110 142 7.9E-4 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS01060 69545cf68b89b0d95b7e7176bb2fa828 576 SMART SM00564 158 190 4.5E-4 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS01060 69545cf68b89b0d95b7e7176bb2fa828 576 SMART SM00564 378 414 300.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS01060 69545cf68b89b0d95b7e7176bb2fa828 576 SMART SM00564 429 479 38.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS01060 69545cf68b89b0d95b7e7176bb2fa828 576 Gene3D G3DSA:2.140.10.10 444 575 5.8E-18 T 28-03-2018 APY29_RS14510 195d41fa5435b41daf75eb9b8cd3d37f 269 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 123 198 3.0E-16 T 28-03-2018 IPR032030 YscD, cytoplasmic domain APY29_RS14510 195d41fa5435b41daf75eb9b8cd3d37f 269 SUPERFAMILY SSF49879 114 215 2.08E-17 T 28-03-2018 IPR008984 SMAD/FHA domain GO:0005515 APY29_RS14510 195d41fa5435b41daf75eb9b8cd3d37f 269 Gene3D G3DSA:2.60.200.20 4 106 0.13 T 28-03-2018 APY29_RS14510 195d41fa5435b41daf75eb9b8cd3d37f 269 Gene3D G3DSA:2.60.200.20 118 220 8.3E-16 T 28-03-2018 APY29_RS14510 195d41fa5435b41daf75eb9b8cd3d37f 269 SMART SM00240 137 187 5.5E-6 T 28-03-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 APY29_RS09490 5d2983482f4adf9cc834b30a7486f989 168 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 163 35.886 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 APY29_RS09490 5d2983482f4adf9cc834b30a7486f989 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 4.1E-48 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 APY29_RS09490 5d2983482f4adf9cc834b30a7486f989 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 4.1E-48 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 APY29_RS09490 5d2983482f4adf9cc834b30a7486f989 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 4.1E-48 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 APY29_RS09490 5d2983482f4adf9cc834b30a7486f989 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 4.1E-48 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 APY29_RS09490 5d2983482f4adf9cc834b30a7486f989 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 4.1E-48 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 APY29_RS09490 5d2983482f4adf9cc834b30a7486f989 168 Gene3D G3DSA:3.40.50.620 2 163 4.0E-36 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS09490 5d2983482f4adf9cc834b30a7486f989 168 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 9 64 3.2E-16 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APY29_RS09490 5d2983482f4adf9cc834b30a7486f989 168 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 8 160 9.9E-58 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 APY29_RS09490 5d2983482f4adf9cc834b30a7486f989 168 Pfam PF01467 Cytidylyltransferase-like 10 138 4.4E-22 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APY29_RS09490 5d2983482f4adf9cc834b30a7486f989 168 SUPERFAMILY SSF52374 7 161 9.65E-45 T 28-03-2018 APY29_RS20680 2b8a271be99c7eaeade161adde985784 104 SUPERFAMILY SSF103481 4 102 1.03E-19 T 28-03-2018 APY29_RS20680 2b8a271be99c7eaeade161adde985784 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 3.7E-29 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 APY29_RS16050 adb4a7dd06f525fb66a07dfea405b3bd 569 Gene3D G3DSA:3.30.450.40 203 394 1.7E-17 T 28-03-2018 IPR029016 GAF domain-like APY29_RS16050 adb4a7dd06f525fb66a07dfea405b3bd 569 Pfam PF13185 GAF domain 266 386 2.6E-7 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS16050 adb4a7dd06f525fb66a07dfea405b3bd 569 SUPERFAMILY SSF55073 404 559 2.82E-49 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS16050 adb4a7dd06f525fb66a07dfea405b3bd 569 Pfam PF00990 Diguanylate cyclase, GGDEF domain 400 557 3.8E-48 T 28-03-2018 IPR000160 GGDEF domain APY29_RS16050 adb4a7dd06f525fb66a07dfea405b3bd 569 SUPERFAMILY SSF55781 257 398 8.29E-13 T 28-03-2018 IPR029016 GAF domain-like APY29_RS16050 adb4a7dd06f525fb66a07dfea405b3bd 569 SMART SM00065 255 396 0.0028 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS16050 adb4a7dd06f525fb66a07dfea405b3bd 569 Pfam PF05227 CHASE3 domain 40 174 1.6E-31 T 28-03-2018 IPR007891 CHASE3 APY29_RS16050 adb4a7dd06f525fb66a07dfea405b3bd 569 SMART SM00267 388 561 5.2E-64 T 28-03-2018 IPR000160 GGDEF domain APY29_RS16050 adb4a7dd06f525fb66a07dfea405b3bd 569 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 395 559 4.3E-55 T 28-03-2018 IPR000160 GGDEF domain APY29_RS16050 adb4a7dd06f525fb66a07dfea405b3bd 569 Gene3D G3DSA:3.30.70.270 395 569 4.2E-56 T 28-03-2018 APY29_RS18470 75fb090d26208eff79efbcef87e7883c 186 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 31 130 3.7E-12 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain APY29_RS18470 75fb090d26208eff79efbcef87e7883c 186 Gene3D G3DSA:3.40.140.10 12 181 2.8E-23 T 28-03-2018 APY29_RS18470 75fb090d26208eff79efbcef87e7883c 186 SUPERFAMILY SSF53927 4 180 6.38E-33 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 APY29_RS02745 09a69d70f96d226abb999036b1676d86 352 Pfam PF00814 Glycoprotease family 29 311 1.1E-99 T 28-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APY29_RS02745 09a69d70f96d226abb999036b1676d86 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 3.5E-52 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APY29_RS02745 09a69d70f96d226abb999036b1676d86 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 101 120 3.5E-52 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APY29_RS02745 09a69d70f96d226abb999036b1676d86 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 80 100 3.5E-52 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APY29_RS02745 09a69d70f96d226abb999036b1676d86 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 135 147 3.5E-52 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APY29_RS02745 09a69d70f96d226abb999036b1676d86 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 3.5E-52 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APY29_RS02745 09a69d70f96d226abb999036b1676d86 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 158 179 3.5E-52 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APY29_RS02745 09a69d70f96d226abb999036b1676d86 352 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 310 6.0E-113 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APY29_RS02745 09a69d70f96d226abb999036b1676d86 352 ProSitePatterns PS01016 Glycoprotease family signature. 100 120 - T 28-03-2018 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 APY29_RS02745 09a69d70f96d226abb999036b1676d86 352 SUPERFAMILY SSF53067 105 313 1.14E-40 T 28-03-2018 APY29_RS02745 09a69d70f96d226abb999036b1676d86 352 Gene3D G3DSA:3.30.420.40 1 148 1.5E-39 T 28-03-2018 APY29_RS02745 09a69d70f96d226abb999036b1676d86 352 SUPERFAMILY SSF53067 3 127 1.42E-30 T 28-03-2018 APY29_RS02745 09a69d70f96d226abb999036b1676d86 352 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 63.218 T 28-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APY29_RS02745 09a69d70f96d226abb999036b1676d86 352 Gene3D G3DSA:3.30.420.40 149 292 1.1E-16 T 28-03-2018 APY29_RS02745 09a69d70f96d226abb999036b1676d86 352 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 1.7E-130 T 28-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APY29_RS16980 fde9c8468e361962d0fac8d7b483afe4 706 SUPERFAMILY SSF53474 449 704 3.27E-69 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS16980 fde9c8468e361962d0fac8d7b483afe4 706 SUPERFAMILY SSF82171 34 147 7.85E-38 T 28-03-2018 APY29_RS16980 fde9c8468e361962d0fac8d7b483afe4 706 SUPERFAMILY SSF82171 183 250 7.85E-38 T 28-03-2018 APY29_RS16980 fde9c8468e361962d0fac8d7b483afe4 706 SUPERFAMILY SSF82171 279 441 7.85E-38 T 28-03-2018 APY29_RS16980 fde9c8468e361962d0fac8d7b483afe4 706 Pfam PF00326 Prolyl oligopeptidase family 496 705 6.7E-60 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APY29_RS16980 fde9c8468e361962d0fac8d7b483afe4 706 Gene3D G3DSA:2.140.10.30 171 440 8.7E-23 T 28-03-2018 APY29_RS16980 fde9c8468e361962d0fac8d7b483afe4 706 Gene3D G3DSA:2.140.10.30 21 157 8.3E-23 T 28-03-2018 APY29_RS16980 fde9c8468e361962d0fac8d7b483afe4 706 Gene3D G3DSA:3.40.50.1820 441 706 3.1E-45 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS16980 fde9c8468e361962d0fac8d7b483afe4 706 Pfam PF07676 WD40-like Beta Propeller Repeat 38 67 0.31 T 28-03-2018 IPR011659 WD40-like Beta Propeller APY29_RS16980 fde9c8468e361962d0fac8d7b483afe4 706 Pfam PF07676 WD40-like Beta Propeller Repeat 83 114 5.9E-5 T 28-03-2018 IPR011659 WD40-like Beta Propeller APY29_RS16980 fde9c8468e361962d0fac8d7b483afe4 706 Pfam PF07676 WD40-like Beta Propeller Repeat 138 148 0.24 T 28-03-2018 IPR011659 WD40-like Beta Propeller APY29_RS16980 fde9c8468e361962d0fac8d7b483afe4 706 Pfam PF07676 WD40-like Beta Propeller Repeat 300 318 0.1 T 28-03-2018 IPR011659 WD40-like Beta Propeller APY29_RS18500 971c5f95bfc6816443307028b9bd780e 163 Gene3D G3DSA:1.10.238.10 125 163 1.2E-6 T 28-03-2018 APY29_RS18500 971c5f95bfc6816443307028b9bd780e 163 SUPERFAMILY SSF47473 111 161 3.91E-7 T 28-03-2018 IPR011992 EF-hand domain pair APY29_RS18500 971c5f95bfc6816443307028b9bd780e 163 Gene3D G3DSA:1.10.1330.10 98 124 0.0015 T 28-03-2018 APY29_RS18500 971c5f95bfc6816443307028b9bd780e 163 Pfam PF13202 EF hand 114 130 9.6E-6 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 APY29_RS17470 626718350b47c74d61aa414f38f6f7f3 197 Pfam PF13662 Toprim domain 79 169 6.2E-22 T 28-03-2018 IPR006171 TOPRIM domain APY29_RS17470 626718350b47c74d61aa414f38f6f7f3 197 Gene3D G3DSA:3.40.1360.10 75 168 1.3E-33 T 28-03-2018 APY29_RS17470 626718350b47c74d61aa414f38f6f7f3 197 Hamap MF_00017 Recombination protein RecR [recR]. 1 196 95.703 T 28-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 APY29_RS17470 626718350b47c74d61aa414f38f6f7f3 197 TIGRFAM TIGR00615 recR: recombination protein RecR 2 193 1.9E-71 T 28-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 APY29_RS17470 626718350b47c74d61aa414f38f6f7f3 197 Pfam PF02132 RecR protein 38 76 1.2E-13 T 28-03-2018 IPR023628 Recombination protein RecR, C4-type zinc finger APY29_RS17470 626718350b47c74d61aa414f38f6f7f3 197 ProSitePatterns PS01300 RecR protein signature. 55 76 - T 28-03-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 APY29_RS17470 626718350b47c74d61aa414f38f6f7f3 197 SMART SM00493 78 163 9.9E-11 T 28-03-2018 IPR006171 TOPRIM domain APY29_RS17470 626718350b47c74d61aa414f38f6f7f3 197 SUPERFAMILY SSF111304 3 195 7.32E-70 T 28-03-2018 IPR023627 Recombination protein RecR APY29_RS01935 1de392581e4559e332b39ed73669bd1e 757 Gene3D G3DSA:2.140.10.30 30 485 2.6E-90 T 28-03-2018 APY29_RS01935 1de392581e4559e332b39ed73669bd1e 757 Gene3D G3DSA:3.40.50.1820 487 752 1.5E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS01935 1de392581e4559e332b39ed73669bd1e 757 Pfam PF00326 Prolyl oligopeptidase family 556 751 6.0E-56 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APY29_RS01935 1de392581e4559e332b39ed73669bd1e 757 SUPERFAMILY SSF82171 30 481 2.09E-54 T 28-03-2018 APY29_RS01935 1de392581e4559e332b39ed73669bd1e 757 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 138 460 6.4E-95 T 28-03-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 APY29_RS01935 1de392581e4559e332b39ed73669bd1e 757 SUPERFAMILY SSF53474 501 750 1.98E-73 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS13415 117dde7f5248753cdfb8bfd91e8052e5 99 Pfam PF09498 Protein of unknown function (DUF2388) 29 98 1.5E-25 T 28-03-2018 IPR012661 Conserved hypothetical protein CHP02448 APY29_RS13415 117dde7f5248753cdfb8bfd91e8052e5 99 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 2 99 1.0E-30 T 28-03-2018 IPR012661 Conserved hypothetical protein CHP02448 APY29_RS00555 727b5f582205d0bee79d405369362035 340 SUPERFAMILY SSF53613 2 329 9.35E-72 T 28-03-2018 IPR029056 Ribokinase-like APY29_RS00555 727b5f582205d0bee79d405369362035 340 Gene3D G3DSA:3.40.1190.20 3 339 1.5E-51 T 28-03-2018 IPR029056 Ribokinase-like APY29_RS00555 727b5f582205d0bee79d405369362035 340 Pfam PF00294 pfkB family carbohydrate kinase 5 312 6.2E-35 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB APY29_RS02220 6c8e50a5c1b3434603eccea85c92da08 395 Pfam PF12704 MacB-like periplasmic core domain 30 233 2.2E-14 T 28-03-2018 IPR025857 MacB-like periplasmic core domain APY29_RS02220 6c8e50a5c1b3434603eccea85c92da08 395 Pfam PF02687 FtsX-like permease family 293 386 2.5E-7 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 APY29_RS08840 e7249a8de4e808c11e1fcaf781feddac 86 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 86 1.4E-37 T 28-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS08840 e7249a8de4e808c11e1fcaf781feddac 86 Pfam PF00312 Ribosomal protein S15 6 85 2.8E-37 T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS08840 e7249a8de4e808c11e1fcaf781feddac 86 Gene3D G3DSA:1.10.287.10 1 86 6.7E-34 T 28-03-2018 APY29_RS08840 e7249a8de4e808c11e1fcaf781feddac 86 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 86 21.612 T 28-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS08840 e7249a8de4e808c11e1fcaf781feddac 86 ProSitePatterns PS00362 Ribosomal protein S15 signature. 36 66 - T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS08840 e7249a8de4e808c11e1fcaf781feddac 86 SUPERFAMILY SSF47060 4 86 2.85E-34 T 28-03-2018 IPR009068 S15/NS1, RNA-binding APY29_RS08840 e7249a8de4e808c11e1fcaf781feddac 86 SMART SM01387 5 85 4.7E-50 T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS08840 e7249a8de4e808c11e1fcaf781feddac 86 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 7 85 2.0E-39 T 28-03-2018 APY29_RS18705 0be1fa7728aba290725f2070e8f9e33d 164 Pfam PF00186 Dihydrofolate reductase 3 163 3.9E-52 T 28-03-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 APY29_RS18705 0be1fa7728aba290725f2070e8f9e33d 164 Gene3D G3DSA:3.40.430.10 1 164 8.4E-46 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 APY29_RS18705 0be1fa7728aba290725f2070e8f9e33d 164 PIRSF PIRSF000194 1 164 6.9E-55 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 APY29_RS18705 0be1fa7728aba290725f2070e8f9e33d 164 SUPERFAMILY SSF53597 1 163 2.72E-49 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 APY29_RS18705 0be1fa7728aba290725f2070e8f9e33d 164 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.5E-12 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 APY29_RS18705 0be1fa7728aba290725f2070e8f9e33d 164 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.5E-12 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 APY29_RS18705 0be1fa7728aba290725f2070e8f9e33d 164 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.5E-12 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 APY29_RS18705 0be1fa7728aba290725f2070e8f9e33d 164 PRINTS PR00070 Dihydrofolate reductase signature 94 108 1.5E-12 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 APY29_RS18705 0be1fa7728aba290725f2070e8f9e33d 164 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 28-03-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 APY29_RS02660 6f66b574f977db153185b87a5a7728d5 322 Gene3D G3DSA:2.60.40.420 127 309 9.0E-50 T 28-03-2018 IPR008972 Cupredoxin APY29_RS02660 6f66b574f977db153185b87a5a7728d5 322 SUPERFAMILY SSF49503 131 276 4.63E-53 T 28-03-2018 IPR008972 Cupredoxin APY29_RS02660 6f66b574f977db153185b87a5a7728d5 322 SUPERFAMILY SSF81464 36 128 6.7E-23 T 28-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02660 6f66b574f977db153185b87a5a7728d5 322 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 51 271 2.5E-59 T 28-03-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02660 6f66b574f977db153185b87a5a7728d5 322 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 36 118 9.8E-13 T 28-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02660 6f66b574f977db153185b87a5a7728d5 322 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 134 261 1.1E-39 T 28-03-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02660 6f66b574f977db153185b87a5a7728d5 322 Gene3D G3DSA:1.10.287.90 36 126 9.5E-24 T 28-03-2018 APY29_RS02660 6f66b574f977db153185b87a5a7728d5 322 PRINTS PR01166 Cytochrome c oxidase subunit II signature 206 226 2.0E-42 T 28-03-2018 APY29_RS02660 6f66b574f977db153185b87a5a7728d5 322 PRINTS PR01166 Cytochrome c oxidase subunit II signature 96 108 2.0E-42 T 28-03-2018 APY29_RS02660 6f66b574f977db153185b87a5a7728d5 322 PRINTS PR01166 Cytochrome c oxidase subunit II signature 108 128 2.0E-42 T 28-03-2018 APY29_RS02660 6f66b574f977db153185b87a5a7728d5 322 PRINTS PR01166 Cytochrome c oxidase subunit II signature 130 149 2.0E-42 T 28-03-2018 APY29_RS02660 6f66b574f977db153185b87a5a7728d5 322 PRINTS PR01166 Cytochrome c oxidase subunit II signature 182 203 2.0E-42 T 28-03-2018 APY29_RS02660 6f66b574f977db153185b87a5a7728d5 322 PRINTS PR01166 Cytochrome c oxidase subunit II signature 226 243 2.0E-42 T 28-03-2018 APY29_RS02660 6f66b574f977db153185b87a5a7728d5 322 PRINTS PR01166 Cytochrome c oxidase subunit II signature 244 261 2.0E-42 T 28-03-2018 APY29_RS02660 6f66b574f977db153185b87a5a7728d5 322 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 207 255 - T 28-03-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS06530 f41d80eb493a92617cf91f5d7c437fc0 480 Gene3D G3DSA:1.25.40.10 26 164 2.2E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS06530 f41d80eb493a92617cf91f5d7c437fc0 480 SUPERFAMILY SSF48452 222 319 1.39E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS06530 f41d80eb493a92617cf91f5d7c437fc0 480 SUPERFAMILY SSF48452 137 171 1.39E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS06530 f41d80eb493a92617cf91f5d7c437fc0 480 Gene3D G3DSA:1.25.40.10 165 307 1.1E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS06530 f41d80eb493a92617cf91f5d7c437fc0 480 Gene3D G3DSA:1.25.40.10 308 472 0.25 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS04140 dbc8c2812733b62263833cdf8c9a5482 1038 Gene3D G3DSA:3.40.50.2000 200 385 8.2E-37 T 28-03-2018 APY29_RS04140 dbc8c2812733b62263833cdf8c9a5482 1038 Gene3D G3DSA:3.40.50.2000 440 829 2.2E-28 T 28-03-2018 APY29_RS04140 dbc8c2812733b62263833cdf8c9a5482 1038 SUPERFAMILY SSF53756 16 397 4.93E-60 T 28-03-2018 APY29_RS04140 dbc8c2812733b62263833cdf8c9a5482 1038 SUPERFAMILY SSF53756 485 835 1.93E-35 T 28-03-2018 APY29_RS04140 dbc8c2812733b62263833cdf8c9a5482 1038 Pfam PF00534 Glycosyl transferases group 1 222 378 3.0E-28 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 APY29_RS04140 dbc8c2812733b62263833cdf8c9a5482 1038 Pfam PF00534 Glycosyl transferases group 1 636 762 2.2E-15 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 APY29_RS04140 dbc8c2812733b62263833cdf8c9a5482 1038 Pfam PF13439 Glycosyltransferase Family 4 18 192 1.4E-7 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 APY29_RS11810 4e719683e0311b0e6f26aa30a16218ea 420 Pfam PF03486 HI0933-like protein 9 403 3.7E-105 T 28-03-2018 APY29_RS11810 4e719683e0311b0e6f26aa30a16218ea 420 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 6.7E-5 T 28-03-2018 APY29_RS11810 4e719683e0311b0e6f26aa30a16218ea 420 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 370 385 6.7E-5 T 28-03-2018 APY29_RS11810 4e719683e0311b0e6f26aa30a16218ea 420 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 10 403 7.3E-99 T 28-03-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like APY29_RS11810 4e719683e0311b0e6f26aa30a16218ea 420 Gene3D G3DSA:3.50.50.60 9 405 6.9E-40 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS11810 4e719683e0311b0e6f26aa30a16218ea 420 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 29 409 8.8E-183 T 28-03-2018 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 APY29_RS11810 4e719683e0311b0e6f26aa30a16218ea 420 SUPERFAMILY SSF160996 194 349 3.66E-8 T 28-03-2018 APY29_RS11810 4e719683e0311b0e6f26aa30a16218ea 420 SUPERFAMILY SSF51905 349 408 4.68E-39 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS11810 4e719683e0311b0e6f26aa30a16218ea 420 SUPERFAMILY SSF51905 9 197 4.68E-39 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS05225 5fbd1227bc542f9fa24731d510a6de6b 73 TIGRFAM TIGR02449 TIGR02449: TIGR02449 family protein 9 73 4.1E-31 T 28-03-2018 IPR012662 Conserved hypothetical protein CHP02449 APY29_RS05225 5fbd1227bc542f9fa24731d510a6de6b 73 Gene3D G3DSA:1.20.5.1000 1 73 5.9E-7 T 28-03-2018 APY29_RS04595 35f13b5fa0ac00ec226b36c2e746a0ff 714 SUPERFAMILY SSF53448 140 415 4.76E-50 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS04595 35f13b5fa0ac00ec226b36c2e746a0ff 714 Pfam PF00535 Glycosyl transferase family 2 141 312 3.0E-36 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 APY29_RS04595 35f13b5fa0ac00ec226b36c2e746a0ff 714 SUPERFAMILY SSF141371 562 648 1.57E-7 T 28-03-2018 APY29_RS04595 35f13b5fa0ac00ec226b36c2e746a0ff 714 Pfam PF03552 Cellulose synthase 316 441 2.0E-10 T 28-03-2018 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 APY29_RS04595 35f13b5fa0ac00ec226b36c2e746a0ff 714 Pfam PF07238 PilZ domain 560 656 2.0E-11 T 28-03-2018 IPR009875 PilZ domain GO:0035438 APY29_RS04595 35f13b5fa0ac00ec226b36c2e746a0ff 714 Gene3D G3DSA:3.90.550.10 138 375 6.3E-48 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS04595 35f13b5fa0ac00ec226b36c2e746a0ff 714 PRINTS PR01439 Cellulose synthase subunit A signature 92 117 1.5E-61 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 APY29_RS04595 35f13b5fa0ac00ec226b36c2e746a0ff 714 PRINTS PR01439 Cellulose synthase subunit A signature 498 522 1.5E-61 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 APY29_RS04595 35f13b5fa0ac00ec226b36c2e746a0ff 714 PRINTS PR01439 Cellulose synthase subunit A signature 64 84 1.5E-61 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 APY29_RS04595 35f13b5fa0ac00ec226b36c2e746a0ff 714 PRINTS PR01439 Cellulose synthase subunit A signature 418 437 1.5E-61 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 APY29_RS04595 35f13b5fa0ac00ec226b36c2e746a0ff 714 PRINTS PR01439 Cellulose synthase subunit A signature 458 477 1.5E-61 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 APY29_RS04595 35f13b5fa0ac00ec226b36c2e746a0ff 714 PRINTS PR01439 Cellulose synthase subunit A signature 389 415 1.5E-61 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 APY29_RS04595 35f13b5fa0ac00ec226b36c2e746a0ff 714 PRINTS PR01439 Cellulose synthase subunit A signature 147 166 1.5E-61 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 APY29_RS04595 35f13b5fa0ac00ec226b36c2e746a0ff 714 PRINTS PR01439 Cellulose synthase subunit A signature 228 252 1.5E-61 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 APY29_RS04595 35f13b5fa0ac00ec226b36c2e746a0ff 714 PRINTS PR01439 Cellulose synthase subunit A signature 533 554 1.5E-61 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 APY29_RS04595 35f13b5fa0ac00ec226b36c2e746a0ff 714 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 15 696 3.6E-271 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 APY29_RS04595 35f13b5fa0ac00ec226b36c2e746a0ff 714 Gene3D G3DSA:2.40.10.220 556 665 3.7E-16 T 28-03-2018 APY29_RS05670 f0a53c2cd8a8ef4953428aaa842dca35 891 Gene3D G3DSA:2.60.40.1730 19 226 2.2E-54 T 28-03-2018 APY29_RS05670 f0a53c2cd8a8ef4953428aaa842dca35 891 SUPERFAMILY SSF55486 243 487 1.76E-71 T 28-03-2018 APY29_RS05670 f0a53c2cd8a8ef4953428aaa842dca35 891 Pfam PF01433 Peptidase family M1 domain 249 467 6.1E-68 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APY29_RS05670 f0a53c2cd8a8ef4953428aaa842dca35 891 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 160 175 1.7E-21 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APY29_RS05670 f0a53c2cd8a8ef4953428aaa842dca35 891 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 303 1.7E-21 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APY29_RS05670 f0a53c2cd8a8ef4953428aaa842dca35 891 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 347 359 1.7E-21 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APY29_RS05670 f0a53c2cd8a8ef4953428aaa842dca35 891 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 208 223 1.7E-21 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APY29_RS05670 f0a53c2cd8a8ef4953428aaa842dca35 891 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 328 343 1.7E-21 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APY29_RS05670 f0a53c2cd8a8ef4953428aaa842dca35 891 SUPERFAMILY SSF63737 28 225 1.27E-47 T 28-03-2018 APY29_RS05670 f0a53c2cd8a8ef4953428aaa842dca35 891 Gene3D G3DSA:1.10.390.10 314 481 3.4E-47 T 28-03-2018 APY29_RS05670 f0a53c2cd8a8ef4953428aaa842dca35 891 Pfam PF11838 ERAP1-like C-terminal domain 558 878 5.9E-38 T 28-03-2018 IPR024571 ERAP1-like C-terminal domain APY29_RS04085 9f784551774d18b926772573555e44bf 457 Gene3D G3DSA:3.40.50.300 1 222 4.6E-60 T 28-03-2018 APY29_RS04085 9f784551774d18b926772573555e44bf 457 Pfam PF00270 DEAD/DEAH box helicase 25 198 1.5E-49 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APY29_RS04085 9f784551774d18b926772573555e44bf 457 SUPERFAMILY SSF52540 75 361 7.97E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS04085 9f784551774d18b926772573555e44bf 457 Gene3D G3DSA:3.40.50.300 223 456 5.4E-45 T 28-03-2018 APY29_RS04085 9f784551774d18b926772573555e44bf 457 Pfam PF00271 Helicase conserved C-terminal domain 233 341 4.0E-29 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS04085 9f784551774d18b926772573555e44bf 457 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APY29_RS04085 9f784551774d18b926772573555e44bf 457 SMART SM00490 260 341 2.1E-31 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS04085 9f784551774d18b926772573555e44bf 457 SMART SM00487 20 224 1.1E-60 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APY29_RS01525 40293f8abac73daa8f457fa54b8221c5 238 SMART SM00331 11 236 1.9E-4 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 APY29_RS01525 40293f8abac73daa8f457fa54b8221c5 238 SMART SM00332 1 234 1.6E-11 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 APY29_RS01525 40293f8abac73daa8f457fa54b8221c5 238 SUPERFAMILY SSF81606 5 237 4.97E-50 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 APY29_RS01525 40293f8abac73daa8f457fa54b8221c5 238 Gene3D G3DSA:3.60.40.10 2 238 3.9E-32 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 APY29_RS01525 40293f8abac73daa8f457fa54b8221c5 238 Pfam PF13672 Protein phosphatase 2C 17 198 1.6E-17 T 28-03-2018 APY29_RS01195 0464cb61c17827819e45bcc8c7d678e6 452 Gene3D G3DSA:2.40.160.10 84 452 2.9E-13 T 28-03-2018 APY29_RS01195 0464cb61c17827819e45bcc8c7d678e6 452 SUPERFAMILY SSF56935 148 452 1.1E-20 T 28-03-2018 APY29_RS01195 0464cb61c17827819e45bcc8c7d678e6 452 SUPERFAMILY SSF56935 91 119 1.1E-20 T 28-03-2018 APY29_RS15415 4beb30abe4c133f797e502aa60275fde 276 Pfam PF00899 ThiF family 20 162 1.7E-34 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APY29_RS15415 4beb30abe4c133f797e502aa60275fde 276 SUPERFAMILY SSF69572 6 260 4.45E-56 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APY29_RS15415 4beb30abe4c133f797e502aa60275fde 276 Gene3D G3DSA:3.40.50.720 1 267 6.1E-45 T 28-03-2018 APY29_RS10045 618bff40379282faed53d75e74f4851d 495 SUPERFAMILY SSF53613 224 488 2.46E-72 T 28-03-2018 IPR029056 Ribokinase-like APY29_RS10045 618bff40379282faed53d75e74f4851d 495 SUPERFAMILY SSF64153 7 245 9.55E-58 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APY29_RS10045 618bff40379282faed53d75e74f4851d 495 Gene3D G3DSA:3.40.50.10260 2 225 1.4E-54 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APY29_RS10045 618bff40379282faed53d75e74f4851d 495 Pfam PF03853 YjeF-related protein N-terminus 30 187 1.4E-38 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APY29_RS10045 618bff40379282faed53d75e74f4851d 495 Gene3D G3DSA:3.40.1190.20 226 491 1.3E-49 T 28-03-2018 IPR029056 Ribokinase-like APY29_RS10045 618bff40379282faed53d75e74f4851d 495 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 12 209 4.3E-40 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APY29_RS10045 618bff40379282faed53d75e74f4851d 495 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 314 324 - T 28-03-2018 IPR017953 Carbohydrate kinase, predicted, conserved site APY29_RS10045 618bff40379282faed53d75e74f4851d 495 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 224 494 22.148 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 APY29_RS10045 618bff40379282faed53d75e74f4851d 495 Pfam PF01256 Carbohydrate kinase 247 484 2.4E-59 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 APY29_RS10045 618bff40379282faed53d75e74f4851d 495 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 9 209 23.05 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APY29_RS10045 618bff40379282faed53d75e74f4851d 495 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 225 487 6.7E-72 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 APY29_RS10045 618bff40379282faed53d75e74f4851d 495 PIRSF PIRSF017184 5 492 4.5E-126 T 28-03-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 APY29_RS23340 0a16835540a3fe63153cf45d728d477e 900 SUPERFAMILY SSF48452 776 887 1.9E-24 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS23340 0a16835540a3fe63153cf45d728d477e 900 Gene3D G3DSA:1.25.40.10 783 825 3.5E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS23340 0a16835540a3fe63153cf45d728d477e 900 Gene3D G3DSA:1.25.40.10 843 900 4.2E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS23340 0a16835540a3fe63153cf45d728d477e 900 SMART SM00028 786 819 0.11 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS23340 0a16835540a3fe63153cf45d728d477e 900 SMART SM00028 854 887 0.0028 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS23340 0a16835540a3fe63153cf45d728d477e 900 SMART SM00028 820 853 0.032 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS23340 0a16835540a3fe63153cf45d728d477e 900 Gene3D G3DSA:1.10.150.200 826 842 8.7E-5 T 28-03-2018 APY29_RS23340 0a16835540a3fe63153cf45d728d477e 900 Gene3D G3DSA:3.40.50.1460 465 715 7.9E-43 T 28-03-2018 APY29_RS23340 0a16835540a3fe63153cf45d728d477e 900 SUPERFAMILY SSF88713 220 448 1.04E-48 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APY29_RS23340 0a16835540a3fe63153cf45d728d477e 900 SUPERFAMILY SSF52129 467 668 2.83E-18 T 28-03-2018 IPR029030 Caspase-like domain APY29_RS23340 0a16835540a3fe63153cf45d728d477e 900 Gene3D G3DSA:3.20.20.370 239 448 1.7E-44 T 28-03-2018 APY29_RS23340 0a16835540a3fe63153cf45d728d477e 900 ProSitePatterns PS00018 EF-hand calcium-binding domain. 671 683 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site APY29_RS23340 0a16835540a3fe63153cf45d728d477e 900 Pfam PF00656 Caspase domain 476 671 1.5E-21 T 28-03-2018 APY29_RS23340 0a16835540a3fe63153cf45d728d477e 900 Pfam PF01522 Polysaccharide deacetylase 253 384 1.6E-24 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 APY29_RS23340 0a16835540a3fe63153cf45d728d477e 900 Pfam PF13424 Tetratricopeptide repeat 820 884 2.8E-9 T 28-03-2018 APY29_RS21705 d510bc9196526bfcb7886d896d445e89 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 1.8E-5 T 28-03-2018 APY29_RS21705 d510bc9196526bfcb7886d896d445e89 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 218 236 1.8E-5 T 28-03-2018 APY29_RS21705 d510bc9196526bfcb7886d896d445e89 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 38 57 1.8E-5 T 28-03-2018 APY29_RS21705 d510bc9196526bfcb7886d896d445e89 473 Gene3D G3DSA:3.50.50.60 34 194 1.9E-16 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS21705 d510bc9196526bfcb7886d896d445e89 473 SUPERFAMILY SSF51905 36 80 2.59E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS21705 d510bc9196526bfcb7886d896d445e89 473 SUPERFAMILY SSF51905 111 407 2.59E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS21705 d510bc9196526bfcb7886d896d445e89 473 Gene3D G3DSA:3.50.50.60 195 344 8.8E-11 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS21705 d510bc9196526bfcb7886d896d445e89 473 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 39 252 2.8E-13 T 28-03-2018 APY29_RS06615 ca48db6221ac7cdb6dce1734c8a2a694 212 SUPERFAMILY SSF55729 12 181 1.97E-35 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS06615 ca48db6221ac7cdb6dce1734c8a2a694 212 Gene3D G3DSA:3.40.630.30 8 186 2.7E-21 T 28-03-2018 APY29_RS06615 ca48db6221ac7cdb6dce1734c8a2a694 212 Pfam PF13302 Acetyltransferase (GNAT) domain 69 157 5.3E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 APY29_RS16160 c434b1003ae1451130f42e1e45f2287e 135 Pfam PF16137 Domain of unknown function (DUF4845) 39 123 6.9E-28 T 28-03-2018 IPR032314 Protein of unknown function DUF4845 APY29_RS06970 edf83072249cf08afc73b8c4786e9735 220 Gene3D G3DSA:2.40.128.110 25 194 3.4E-48 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APY29_RS06970 edf83072249cf08afc73b8c4786e9735 220 SMART SM00867 26 191 4.7E-52 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APY29_RS06970 edf83072249cf08afc73b8c4786e9735 220 Pfam PF04264 YceI-like domain 27 190 3.6E-37 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APY29_RS06970 edf83072249cf08afc73b8c4786e9735 220 SUPERFAMILY SSF101874 24 192 4.19E-47 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APY29_RS14595 be79134279b4a846f54407fdb4805bea 320 Gene3D G3DSA:3.30.930.10 2 319 1.0E-50 T 28-03-2018 APY29_RS14595 be79134279b4a846f54407fdb4805bea 320 Pfam PF00152 tRNA synthetases class II (D, K and N) 9 315 8.4E-34 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS14595 be79134279b4a846f54407fdb4805bea 320 SUPERFAMILY SSF55681 9 315 3.38E-64 T 28-03-2018 APY29_RS14595 be79134279b4a846f54407fdb4805bea 320 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 11 315 2.3E-109 T 28-03-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 APY29_RS17245 4107f1ec4f3a4969a8292578fb2a996e 154 SMART SM01321 19 133 3.6E-21 T 28-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 APY29_RS17245 4107f1ec4f3a4969a8292578fb2a996e 154 Gene3D G3DSA:3.30.70.1290 10 139 6.2E-24 T 28-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 APY29_RS17245 4107f1ec4f3a4969a8292578fb2a996e 154 SUPERFAMILY SSF143422 12 136 6.15E-25 T 28-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 APY29_RS17245 4107f1ec4f3a4969a8292578fb2a996e 154 Pfam PF01797 Transposase IS200 like 23 130 2.2E-12 T 28-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 APY29_RS18200 38d316a4bef16f8993bbf0307ad9b779 568 Gene3D G3DSA:3.40.50.2000 352 543 8.4E-30 T 28-03-2018 APY29_RS18200 38d316a4bef16f8993bbf0307ad9b779 568 SUPERFAMILY SSF53756 211 557 1.21E-10 T 28-03-2018 APY29_RS18200 38d316a4bef16f8993bbf0307ad9b779 568 SMART SM00028 57 90 5.3 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS18200 38d316a4bef16f8993bbf0307ad9b779 568 SMART SM00028 91 124 23.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS18200 38d316a4bef16f8993bbf0307ad9b779 568 SMART SM00028 23 56 69.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS18200 38d316a4bef16f8993bbf0307ad9b779 568 Gene3D G3DSA:1.25.40.10 72 162 6.7E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS18200 38d316a4bef16f8993bbf0307ad9b779 568 Pfam PF14559 Tetratricopeptide repeat 68 127 4.5E-8 T 28-03-2018 APY29_RS18200 38d316a4bef16f8993bbf0307ad9b779 568 SUPERFAMILY SSF48452 12 138 2.46E-18 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS18200 38d316a4bef16f8993bbf0307ad9b779 568 Gene3D G3DSA:1.25.40.10 7 71 3.7E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS18200 38d316a4bef16f8993bbf0307ad9b779 568 Pfam PF13844 Glycosyl transferase family 41 366 556 6.3E-46 T 28-03-2018 IPR029489 O-GlcNAc transferase, C-terminal Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 APY29_RS18200 38d316a4bef16f8993bbf0307ad9b779 568 Pfam PF13844 Glycosyl transferase family 41 206 357 9.8E-31 T 28-03-2018 IPR029489 O-GlcNAc transferase, C-terminal Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 APY29_RS04700 bd93df931c257e6b774b95fadb0cabb3 733 Gene3D G3DSA:2.40.170.20 195 733 8.8E-69 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS04700 bd93df931c257e6b774b95fadb0cabb3 733 Pfam PF00593 TonB dependent receptor 275 732 3.3E-43 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS04700 bd93df931c257e6b774b95fadb0cabb3 733 Pfam PF07715 TonB-dependent Receptor Plug Domain 88 183 3.5E-12 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS04700 bd93df931c257e6b774b95fadb0cabb3 733 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 716 733 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site APY29_RS04700 bd93df931c257e6b774b95fadb0cabb3 733 Gene3D G3DSA:2.170.130.10 46 192 3.3E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS04700 bd93df931c257e6b774b95fadb0cabb3 733 SUPERFAMILY SSF56935 52 733 2.38E-102 T 28-03-2018 APY29_RS04700 bd93df931c257e6b774b95fadb0cabb3 733 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 90 733 1.3E-89 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APY29_RS01255 14748c13bbec722301e300085ca51b83 542 Gene3D G3DSA:3.60.21.10 161 534 1.0E-47 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like APY29_RS01255 14748c13bbec722301e300085ca51b83 542 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 57 154 2.4E-27 T 28-03-2018 IPR032093 Phospholipase D, N-terminal APY29_RS01255 14748c13bbec722301e300085ca51b83 542 SUPERFAMILY SSF56300 166 334 4.3E-33 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like APY29_RS01255 14748c13bbec722301e300085ca51b83 542 SUPERFAMILY SSF56300 365 512 4.3E-33 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like APY29_RS01255 14748c13bbec722301e300085ca51b83 542 Pfam PF09423 PhoD-like phosphatase 167 510 1.0E-103 T 28-03-2018 IPR018946 Alkaline phosphatase D-related APY29_RS07545 e993a9fd57e7f2782a1a7d437523e101 376 Pfam PF00437 Type II/IV secretion system protein 12 271 8.5E-35 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APY29_RS07545 e993a9fd57e7f2782a1a7d437523e101 376 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 7 347 2.2E-135 T 28-03-2018 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 APY29_RS07545 e993a9fd57e7f2782a1a7d437523e101 376 Gene3D G3DSA:3.30.450.90 4 102 3.2E-20 T 28-03-2018 APY29_RS07545 e993a9fd57e7f2782a1a7d437523e101 376 Gene3D G3DSA:3.40.50.300 118 276 5.8E-22 T 28-03-2018 APY29_RS07545 e993a9fd57e7f2782a1a7d437523e101 376 Gene3D G3DSA:3.40.50.300 277 350 1.7E-13 T 28-03-2018 APY29_RS07545 e993a9fd57e7f2782a1a7d437523e101 376 SUPERFAMILY SSF52540 8 341 2.28E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS00935 145ea853fe2b004260e49a4258f89cfa 289 Pfam PF01464 Transglycosylase SLT domain 28 159 1.2E-13 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 APY29_RS00935 145ea853fe2b004260e49a4258f89cfa 289 Gene3D G3DSA:1.10.530.10 13 283 1.7E-17 T 28-03-2018 APY29_RS00935 145ea853fe2b004260e49a4258f89cfa 289 SUPERFAMILY SSF53955 87 175 1.73E-15 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS00935 145ea853fe2b004260e49a4258f89cfa 289 SUPERFAMILY SSF53955 22 59 1.73E-15 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS00405 2453200a92b460e2a28288388f3863fb 159 Pfam PF13673 Acetyltransferase (GNAT) domain 37 143 2.5E-12 T 28-03-2018 IPR000182 GNAT domain GO:0008080 APY29_RS00405 2453200a92b460e2a28288388f3863fb 159 SUPERFAMILY SSF55729 2 142 4.79E-20 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS00405 2453200a92b460e2a28288388f3863fb 159 Gene3D G3DSA:3.40.630.30 1 158 7.2E-22 T 28-03-2018 APY29_RS05335 be064a4a4a778551092f5ec3185b6bec 352 SUPERFAMILY SSF53067 190 350 5.86E-24 T 28-03-2018 APY29_RS05335 be064a4a4a778551092f5ec3185b6bec 352 SUPERFAMILY SSF53067 59 173 2.04E-8 T 28-03-2018 APY29_RS05335 be064a4a4a778551092f5ec3185b6bec 352 Pfam PF11104 Type IV pilus assembly protein PilM; 13 351 1.0E-134 T 28-03-2018 IPR005883 Type IV pilus assembly protein PilM APY29_RS05335 be064a4a4a778551092f5ec3185b6bec 352 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 8 351 8.0E-141 T 28-03-2018 IPR005883 Type IV pilus assembly protein PilM APY29_RS05335 be064a4a4a778551092f5ec3185b6bec 352 PIRSF PIRSF019169 1 352 2.2E-128 T 28-03-2018 IPR005883 Type IV pilus assembly protein PilM APY29_RS05335 be064a4a4a778551092f5ec3185b6bec 352 Gene3D G3DSA:3.30.420.40 189 303 9.1E-14 T 28-03-2018 APY29_RS05335 be064a4a4a778551092f5ec3185b6bec 352 Gene3D G3DSA:3.30.420.40 304 352 3.0E-4 T 28-03-2018 APY29_RS05335 be064a4a4a778551092f5ec3185b6bec 352 Gene3D G3DSA:3.30.420.40 2 170 5.1E-33 T 28-03-2018 APY29_RS07955 33ff92e97ce8412597796f6f9107c0dc 310 Pfam PF03466 LysR substrate binding domain 90 300 3.2E-47 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS07955 33ff92e97ce8412597796f6f9107c0dc 310 SUPERFAMILY SSF46785 3 112 2.57E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS07955 33ff92e97ce8412597796f6f9107c0dc 310 Gene3D G3DSA:3.40.190.10 86 183 1.8E-22 T 28-03-2018 APY29_RS07955 33ff92e97ce8412597796f6f9107c0dc 310 Gene3D G3DSA:1.10.10.10 3 84 9.4E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS07955 33ff92e97ce8412597796f6f9107c0dc 310 SUPERFAMILY SSF53850 90 304 2.33E-47 T 28-03-2018 APY29_RS07955 33ff92e97ce8412597796f6f9107c0dc 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 8.1E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS07955 33ff92e97ce8412597796f6f9107c0dc 310 Gene3D G3DSA:3.40.190.10 184 273 5.1E-9 T 28-03-2018 APY29_RS23255 faeaffd192ef7b0ae533674f57c896c2 471 PIRSF PIRSF006060 6 468 2.1E-84 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APY29_RS23255 faeaffd192ef7b0ae533674f57c896c2 471 Pfam PF13520 Amino acid permease 26 435 6.0E-54 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APY29_RS09105 4a8c2dc2f8bd594c3bcce6e33d6a7300 180 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 10 179 31.163 T 28-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 APY29_RS09105 4a8c2dc2f8bd594c3bcce6e33d6a7300 180 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 17 85 4.1E-30 T 28-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 APY29_RS09105 4a8c2dc2f8bd594c3bcce6e33d6a7300 180 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 92 177 3.5E-36 T 28-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 APY29_RS09105 4a8c2dc2f8bd594c3bcce6e33d6a7300 180 SUPERFAMILY SSF54364 15 87 2.88E-29 T 28-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 APY29_RS09105 4a8c2dc2f8bd594c3bcce6e33d6a7300 180 SUPERFAMILY SSF55200 92 179 5.76E-31 T 28-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 APY29_RS09105 4a8c2dc2f8bd594c3bcce6e33d6a7300 180 ProSitePatterns PS00938 Initiation factor 3 signature. 67 80 - T 28-03-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 APY29_RS09105 4a8c2dc2f8bd594c3bcce6e33d6a7300 180 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 17 179 2.0E-63 T 28-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 APY29_RS09105 4a8c2dc2f8bd594c3bcce6e33d6a7300 180 Gene3D G3DSA:3.10.20.80 11 87 3.0E-32 T 28-03-2018 APY29_RS09105 4a8c2dc2f8bd594c3bcce6e33d6a7300 180 Gene3D G3DSA:3.30.110.10 88 180 2.0E-33 T 28-03-2018 APY29_RS15380 f33a2c50843805a6a2bfeb245b383aa8 212 Gene3D G3DSA:3.40.30.10 2 100 1.6E-29 T 28-03-2018 APY29_RS15380 f33a2c50843805a6a2bfeb245b383aa8 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 7 82 3.2E-16 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APY29_RS15380 f33a2c50843805a6a2bfeb245b383aa8 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 122 199 9.6E-11 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal APY29_RS15380 f33a2c50843805a6a2bfeb245b383aa8 212 Gene3D G3DSA:1.20.1050.10 101 204 4.6E-25 T 28-03-2018 APY29_RS15380 f33a2c50843805a6a2bfeb245b383aa8 212 SUPERFAMILY SSF52833 6 85 1.81E-21 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS15380 f33a2c50843805a6a2bfeb245b383aa8 212 SUPERFAMILY SSF47616 83 203 7.64E-29 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like APY29_RS22005 0522b2b4fa6290dd87ccf306b33eb212 214 Pfam PF02036 SCP-2 sterol transfer family 21 121 3.5E-16 T 28-03-2018 IPR003033 SCP2 sterol-binding domain APY29_RS22005 0522b2b4fa6290dd87ccf306b33eb212 214 Gene3D G3DSA:3.30.1050.10 14 132 2.6E-4 T 28-03-2018 IPR003033 SCP2 sterol-binding domain APY29_RS06405 a0434ae9f704a8662d0e843a1457e19e 119 Gene3D G3DSA:3.40.50.2300 2 119 7.0E-19 T 28-03-2018 APY29_RS06405 a0434ae9f704a8662d0e843a1457e19e 119 Pfam PF00072 Response regulator receiver domain 5 110 8.5E-13 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS06405 a0434ae9f704a8662d0e843a1457e19e 119 SUPERFAMILY SSF52172 3 115 2.42E-21 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS06405 a0434ae9f704a8662d0e843a1457e19e 119 SMART SM00448 3 110 9.6E-14 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS14075 52150a1fcaf8d18dbec206ae582fed4f 166 Gene3D G3DSA:3.30.1330.50 1 161 3.6E-72 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 APY29_RS14075 52150a1fcaf8d18dbec206ae582fed4f 166 SUPERFAMILY SSF69765 4 160 5.49E-65 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 APY29_RS14075 52150a1fcaf8d18dbec206ae582fed4f 166 Pfam PF02542 YgbB family 5 158 6.1E-64 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 APY29_RS14075 52150a1fcaf8d18dbec206ae582fed4f 166 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 6 159 3.2E-69 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 APY29_RS14075 52150a1fcaf8d18dbec206ae582fed4f 166 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 39 54 - T 28-03-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 APY29_RS14075 52150a1fcaf8d18dbec206ae582fed4f 166 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 5 160 35.794 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 APY29_RS15995 6f01b7faf0c31c5aa48bc3bdadbf588d 57 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 52 20.7 T 28-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 APY29_RS15995 6f01b7faf0c31c5aa48bc3bdadbf588d 57 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 7.9E-11 T 28-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 APY29_RS15995 6f01b7faf0c31c5aa48bc3bdadbf588d 57 PIRSF PIRSF036466 1 55 1.7E-22 T 28-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 APY29_RS07555 f03d4e37568ae6792e1567b6160e7851 298 Pfam PF01904 Protein of unknown function DUF72 20 284 1.4E-71 T 28-03-2018 IPR002763 Protein of unknown function DUF72 APY29_RS07555 f03d4e37568ae6792e1567b6160e7851 298 SUPERFAMILY SSF117396 160 287 3.27E-83 T 28-03-2018 IPR002763 Protein of unknown function DUF72 APY29_RS07555 f03d4e37568ae6792e1567b6160e7851 298 SUPERFAMILY SSF117396 1 131 3.27E-83 T 28-03-2018 IPR002763 Protein of unknown function DUF72 APY29_RS07555 f03d4e37568ae6792e1567b6160e7851 298 Gene3D G3DSA:3.20.20.410 1 297 1.0E-91 T 28-03-2018 IPR002763 Protein of unknown function DUF72 APY29_RS23760 7cc6da8b434395b4185692b52e80ac8c 226 Pfam PF11740 Plasmid replication region DNA-binding N-term 8 114 7.7E-14 T 28-03-2018 IPR021104 KfrA, N-terminal DNA-binding domain APY29_RS23760 7cc6da8b434395b4185692b52e80ac8c 226 Gene3D G3DSA:1.20.1170.10 12 208 3.5E-6 T 28-03-2018 APY29_RS21065 b564be15ac0ba13c68a87d68574304a8 233 Pfam PF02108 Flagellar assembly protein FliH 110 213 1.1E-9 T 28-03-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE APY29_RS21065 b564be15ac0ba13c68a87d68574304a8 233 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 47 206 1.9E-36 T 28-03-2018 IPR012842 Type III secretion system HrpE/YscL APY29_RS01635 53cdc62efc9799bde185e7a2b0a6474a 95 Gene3D G3DSA:3.10.129.10 2 94 3.6E-16 T 28-03-2018 APY29_RS01635 53cdc62efc9799bde185e7a2b0a6474a 95 SUPERFAMILY SSF54637 4 93 1.75E-15 T 28-03-2018 IPR029069 HotDog domain APY29_RS01635 53cdc62efc9799bde185e7a2b0a6474a 95 PIRSF PIRSF030962 1 81 3.6E-9 T 28-03-2018 IPR016962 Dehydrase, ECs4332, predicted KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 APY29_RS01635 53cdc62efc9799bde185e7a2b0a6474a 95 Pfam PF07977 FabA-like domain 6 60 7.2E-7 T 28-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 APY29_RS05965 06d75f550f384fda1ff537023d433097 325 SUPERFAMILY SSF51445 26 307 3.47E-26 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS05965 06d75f550f384fda1ff537023d433097 325 Gene3D G3DSA:3.20.20.80 28 313 3.9E-19 T 28-03-2018 APY29_RS03670 386eec520634ba89f997fa011e1b88cd 366 Hamap MF_01201 Alanine racemase. 1 355 34.665 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 APY29_RS03670 386eec520634ba89f997fa011e1b88cd 366 Pfam PF01168 Alanine racemase, N-terminal domain 8 218 5.1E-65 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 APY29_RS03670 386eec520634ba89f997fa011e1b88cd 366 PRINTS PR00992 Alanine racemase signature 154 165 4.0E-59 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 APY29_RS03670 386eec520634ba89f997fa011e1b88cd 366 PRINTS PR00992 Alanine racemase signature 265 280 4.0E-59 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 APY29_RS03670 386eec520634ba89f997fa011e1b88cd 366 PRINTS PR00992 Alanine racemase signature 286 303 4.0E-59 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 APY29_RS03670 386eec520634ba89f997fa011e1b88cd 366 PRINTS PR00992 Alanine racemase signature 120 132 4.0E-59 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 APY29_RS03670 386eec520634ba89f997fa011e1b88cd 366 PRINTS PR00992 Alanine racemase signature 248 263 4.0E-59 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 APY29_RS03670 386eec520634ba89f997fa011e1b88cd 366 PRINTS PR00992 Alanine racemase signature 60 78 4.0E-59 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 APY29_RS03670 386eec520634ba89f997fa011e1b88cd 366 PRINTS PR00992 Alanine racemase signature 25 41 4.0E-59 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 APY29_RS03670 386eec520634ba89f997fa011e1b88cd 366 PRINTS PR00992 Alanine racemase signature 191 218 4.0E-59 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 APY29_RS03670 386eec520634ba89f997fa011e1b88cd 366 Pfam PF00842 Alanine racemase, C-terminal domain 232 354 8.9E-40 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 APY29_RS03670 386eec520634ba89f997fa011e1b88cd 366 SMART SM01005 232 355 2.4E-63 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 APY29_RS03670 386eec520634ba89f997fa011e1b88cd 366 Gene3D G3DSA:2.40.37.10 216 364 1.9E-54 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 APY29_RS03670 386eec520634ba89f997fa011e1b88cd 366 SUPERFAMILY SSF50621 226 357 4.19E-45 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 APY29_RS03670 386eec520634ba89f997fa011e1b88cd 366 Gene3D G3DSA:3.20.20.10 2 215 5.3E-43 T 28-03-2018 IPR029066 PLP-binding barrel APY29_RS03670 386eec520634ba89f997fa011e1b88cd 366 SUPERFAMILY SSF51419 8 233 2.22E-68 T 28-03-2018 IPR029066 PLP-binding barrel APY29_RS03670 386eec520634ba89f997fa011e1b88cd 366 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 28-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 APY29_RS03670 386eec520634ba89f997fa011e1b88cd 366 TIGRFAM TIGR00492 alr: alanine racemase 2 355 1.7E-107 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 APY29_RS06145 992513e2c3e6409173c106a98798d0a2 196 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 179 3.2E-41 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 APY29_RS06145 992513e2c3e6409173c106a98798d0a2 196 SUPERFAMILY SSF53254 3 181 2.57E-44 T 28-03-2018 IPR029033 Histidine phosphatase superfamily APY29_RS06145 992513e2c3e6409173c106a98798d0a2 196 Gene3D G3DSA:3.40.50.1240 1 189 6.5E-39 T 28-03-2018 IPR029033 Histidine phosphatase superfamily APY29_RS06145 992513e2c3e6409173c106a98798d0a2 196 SMART SM00855 4 152 9.7E-12 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 APY29_RS07775 ed9e1eee7d35b06a29a821f82ffa9fa4 375 Pfam PF00072 Response regulator receiver domain 24 125 5.5E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS07775 ed9e1eee7d35b06a29a821f82ffa9fa4 375 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 21 375 39.861 T 28-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APY29_RS07775 ed9e1eee7d35b06a29a821f82ffa9fa4 375 Pfam PF01339 CheB methylesterase 192 370 1.7E-60 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APY29_RS07775 ed9e1eee7d35b06a29a821f82ffa9fa4 375 Gene3D G3DSA:3.40.50.2300 20 173 7.1E-28 T 28-03-2018 APY29_RS07775 ed9e1eee7d35b06a29a821f82ffa9fa4 375 SUPERFAMILY SSF52172 20 153 6.55E-27 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS07775 ed9e1eee7d35b06a29a821f82ffa9fa4 375 SUPERFAMILY SSF52738 187 373 4.05E-70 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APY29_RS07775 ed9e1eee7d35b06a29a821f82ffa9fa4 375 SMART SM00448 21 144 1.3E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS07775 ed9e1eee7d35b06a29a821f82ffa9fa4 375 PIRSF PIRSF000876 18 375 4.3E-133 T 28-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APY29_RS07775 ed9e1eee7d35b06a29a821f82ffa9fa4 375 Gene3D G3DSA:3.40.50.180 180 375 9.5E-77 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APY29_RS17510 ec3c1b3bd16b7e99f10e7053b233a8fc 343 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 14 343 39.389 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 APY29_RS17510 ec3c1b3bd16b7e99f10e7053b233a8fc 343 Pfam PF13353 4Fe-4S single cluster domain 31 117 6.6E-6 T 28-03-2018 APY29_RS17510 ec3c1b3bd16b7e99f10e7053b233a8fc 343 Pfam PF04055 Radical SAM superfamily 28 190 8.2E-25 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 APY29_RS17510 ec3c1b3bd16b7e99f10e7053b233a8fc 343 SMART SM00729 23 225 4.7E-4 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APY29_RS17510 ec3c1b3bd16b7e99f10e7053b233a8fc 343 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 14 343 3.2E-104 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 APY29_RS17510 ec3c1b3bd16b7e99f10e7053b233a8fc 343 Pfam PF06463 Molybdenum Cofactor Synthesis C 200 323 4.0E-34 T 28-03-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 Reactome: R-HSA-947581 APY29_RS17510 ec3c1b3bd16b7e99f10e7053b233a8fc 343 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 29 40 - T 28-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 APY29_RS17510 ec3c1b3bd16b7e99f10e7053b233a8fc 343 SUPERFAMILY SSF102114 13 291 5.1E-68 T 28-03-2018 APY29_RS17510 ec3c1b3bd16b7e99f10e7053b233a8fc 343 Gene3D G3DSA:3.20.20.70 10 343 4.7E-69 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS16115 e68cc5402fdbaa8863d9b4dbd95ba786 525 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 21 237 5.6E-69 T 28-03-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein APY29_RS16115 e68cc5402fdbaa8863d9b4dbd95ba786 525 SUPERFAMILY SSF48173 245 502 4.19E-56 T 28-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 APY29_RS16115 e68cc5402fdbaa8863d9b4dbd95ba786 525 Gene3D G3DSA:1.25.40.80 147 333 5.4E-47 T 28-03-2018 APY29_RS16115 e68cc5402fdbaa8863d9b4dbd95ba786 525 Gene3D G3DSA:1.10.579.10 334 498 6.2E-27 T 28-03-2018 APY29_RS20875 454b0d49bdd962b5bdb8ef132d209e7b 1193 SMART SM00237 210 296 0.0042 T 28-03-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 APY29_RS20875 454b0d49bdd962b5bdb8ef132d209e7b 1193 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 591 912 1.2E-6 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS20875 454b0d49bdd962b5bdb8ef132d209e7b 1193 Pfam PF00932 Lamin Tail Domain 21 124 3.1E-14 T 28-03-2018 IPR001322 Lamin Tail Domain APY29_RS20875 454b0d49bdd962b5bdb8ef132d209e7b 1193 Gene3D G3DSA:2.60.40.1260 20 204 6.4E-14 T 28-03-2018 IPR001322 Lamin Tail Domain APY29_RS20875 454b0d49bdd962b5bdb8ef132d209e7b 1193 Gene3D G3DSA:3.60.10.10 587 920 2.1E-22 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS20875 454b0d49bdd962b5bdb8ef132d209e7b 1193 Pfam PF03160 Calx-beta domain 225 296 1.9E-8 T 28-03-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 APY29_RS20875 454b0d49bdd962b5bdb8ef132d209e7b 1193 SUPERFAMILY SSF88633 19 192 1.65E-12 T 28-03-2018 APY29_RS20875 454b0d49bdd962b5bdb8ef132d209e7b 1193 SUPERFAMILY SSF56219 587 920 1.7E-22 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS20875 454b0d49bdd962b5bdb8ef132d209e7b 1193 SUPERFAMILY SSF141072 214 318 2.09E-22 T 28-03-2018 APY29_RS20875 454b0d49bdd962b5bdb8ef132d209e7b 1193 Gene3D G3DSA:2.60.40.1740 209 319 9.2E-5 T 28-03-2018 APY29_RS20875 454b0d49bdd962b5bdb8ef132d209e7b 1193 Gene3D G3DSA:2.60.40.1510 926 1055 1.2E-13 T 28-03-2018 APY29_RS20875 454b0d49bdd962b5bdb8ef132d209e7b 1193 Gene3D G3DSA:2.60.40.1510 1058 1187 5.7E-8 T 28-03-2018 APY29_RS21800 1b9bbe8f5b2523b3a9ba969e0bfa7612 220 Gene3D G3DSA:3.40.50.1820 1 220 1.7E-35 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS21800 1b9bbe8f5b2523b3a9ba969e0bfa7612 220 SUPERFAMILY SSF53474 12 216 3.44E-47 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS21800 1b9bbe8f5b2523b3a9ba969e0bfa7612 220 Pfam PF12146 Serine aminopeptidase, S33 50 143 1.8E-6 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 APY29_RS18290 bb613076c7617a01a98ee15195290f5e 485 Gene3D G3DSA:3.40.50.1220 304 478 1.6E-77 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain APY29_RS18290 bb613076c7617a01a98ee15195290f5e 485 PIRSF PIRSF000204 8 479 3.3E-158 T 28-03-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 APY29_RS18290 bb613076c7617a01a98ee15195290f5e 485 Pfam PF02233 NAD(P) transhydrogenase beta subunit 15 475 6.2E-167 T 28-03-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 APY29_RS18290 bb613076c7617a01a98ee15195290f5e 485 SUPERFAMILY SSF52467 306 478 2.0E-69 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain APY29_RS08470 8755bfe8445e703c580cd511efb5134c 531 SUPERFAMILY SSF51905 387 413 2.44E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS08470 8755bfe8445e703c580cd511efb5134c 531 SUPERFAMILY SSF51905 6 352 2.44E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS08470 8755bfe8445e703c580cd511efb5134c 531 Pfam PF01593 Flavin containing amine oxidoreductase 19 333 6.9E-17 T 28-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 APY29_RS08470 8755bfe8445e703c580cd511efb5134c 531 Gene3D G3DSA:3.50.50.60 3 531 4.9E-39 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS15295 64fc9c2e5e59b185eb9759f9ea360046 551 Gene3D G3DSA:3.30.450.40 184 377 1.1E-16 T 28-03-2018 IPR029016 GAF domain-like APY29_RS15295 64fc9c2e5e59b185eb9759f9ea360046 551 SMART SM00065 239 379 0.0041 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS15295 64fc9c2e5e59b185eb9759f9ea360046 551 SUPERFAMILY SSF55073 387 543 1.18E-47 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS15295 64fc9c2e5e59b185eb9759f9ea360046 551 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 378 543 9.7E-53 T 28-03-2018 IPR000160 GGDEF domain APY29_RS15295 64fc9c2e5e59b185eb9759f9ea360046 551 Pfam PF13185 GAF domain 238 370 2.0E-8 T 28-03-2018 IPR003018 GAF domain GO:0005515 APY29_RS15295 64fc9c2e5e59b185eb9759f9ea360046 551 Gene3D G3DSA:3.30.70.270 378 549 5.9E-55 T 28-03-2018 APY29_RS15295 64fc9c2e5e59b185eb9759f9ea360046 551 SMART SM00267 371 544 9.3E-65 T 28-03-2018 IPR000160 GGDEF domain APY29_RS15295 64fc9c2e5e59b185eb9759f9ea360046 551 Pfam PF05227 CHASE3 domain 24 158 1.6E-30 T 28-03-2018 IPR007891 CHASE3 APY29_RS15295 64fc9c2e5e59b185eb9759f9ea360046 551 SUPERFAMILY SSF55781 239 381 9.81E-13 T 28-03-2018 IPR029016 GAF domain-like APY29_RS15295 64fc9c2e5e59b185eb9759f9ea360046 551 Pfam PF00990 Diguanylate cyclase, GGDEF domain 383 540 1.2E-45 T 28-03-2018 IPR000160 GGDEF domain APY29_RS17765 9c7532195cc63e6f664b6bf32ca7bae1 139 SUPERFAMILY SSF50494 8 95 4.91E-10 T 28-03-2018 IPR009003 Peptidase S1, PA clan APY29_RS17765 9c7532195cc63e6f664b6bf32ca7bae1 139 Pfam PF10459 Peptidase S46 22 138 4.8E-46 T 28-03-2018 IPR019500 Peptidase S46 GO:0008239|GO:0070009 APY29_RS17765 9c7532195cc63e6f664b6bf32ca7bae1 139 Gene3D G3DSA:2.40.10.10 16 132 3.8E-6 T 28-03-2018 APY29_RS12505 4c83fc994acc7f24a4dd31c1ea9d52f9 262 Gene3D G3DSA:1.25.40.10 42 99 1.0E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS12505 4c83fc994acc7f24a4dd31c1ea9d52f9 262 SMART SM00028 81 114 78.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS12505 4c83fc994acc7f24a4dd31c1ea9d52f9 262 SMART SM00028 47 80 45.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS12505 4c83fc994acc7f24a4dd31c1ea9d52f9 262 SMART SM00028 151 184 0.0019 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS12505 4c83fc994acc7f24a4dd31c1ea9d52f9 262 SMART SM00028 185 218 310.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS12505 4c83fc994acc7f24a4dd31c1ea9d52f9 262 SUPERFAMILY SSF48452 64 253 9.86E-21 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS12505 4c83fc994acc7f24a4dd31c1ea9d52f9 262 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 39 250 1.5E-51 T 28-03-2018 IPR013360 Pilus biogenesis/stability type IV, PilW APY29_RS12505 4c83fc994acc7f24a4dd31c1ea9d52f9 262 Gene3D G3DSA:1.25.40.10 100 125 4.0E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS12505 4c83fc994acc7f24a4dd31c1ea9d52f9 262 Gene3D G3DSA:1.25.40.10 184 252 1.5E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS12505 4c83fc994acc7f24a4dd31c1ea9d52f9 262 Gene3D G3DSA:1.25.40.10 126 183 3.3E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS12505 4c83fc994acc7f24a4dd31c1ea9d52f9 262 Pfam PF13432 Tetratricopeptide repeat 51 113 1.6E-7 T 28-03-2018 APY29_RS12505 4c83fc994acc7f24a4dd31c1ea9d52f9 262 Pfam PF13432 Tetratricopeptide repeat 128 185 4.6E-4 T 28-03-2018 APY29_RS10915 606a597f00c40764ce152b342e8f1b76 169 Pfam PF06853 Protein of unknown function (DUF1249) 31 145 3.3E-27 T 28-03-2018 IPR009659 Protein of unknown function DUF1249 APY29_RS21990 58442c919dba3c5bbf821aef59501e89 263 SUPERFAMILY SSF55120 22 254 7.36E-55 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS21990 58442c919dba3c5bbf821aef59501e89 263 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 75 89 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS21990 58442c919dba3c5bbf821aef59501e89 263 Pfam PF00849 RNA pseudouridylate synthase 36 187 6.9E-29 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS21990 58442c919dba3c5bbf821aef59501e89 263 Gene3D G3DSA:3.30.2350.10 26 251 4.8E-54 T 28-03-2018 APY29_RS00380 4b2b4463d4dc75d43e82283165b5eef1 641 Gene3D G3DSA:3.60.20.10 1 217 1.7E-17 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APY29_RS00380 4b2b4463d4dc75d43e82283165b5eef1 641 Gene3D G3DSA:3.40.50.620 218 630 5.2E-27 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS00380 4b2b4463d4dc75d43e82283165b5eef1 641 SUPERFAMILY SSF56235 20 220 3.35E-23 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APY29_RS00380 4b2b4463d4dc75d43e82283165b5eef1 641 Pfam PF13537 Glutamine amidotransferase domain 68 164 2.4E-11 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain APY29_RS00380 4b2b4463d4dc75d43e82283165b5eef1 641 SUPERFAMILY SSF52402 215 388 1.26E-24 T 28-03-2018 APY29_RS00380 4b2b4463d4dc75d43e82283165b5eef1 641 SUPERFAMILY SSF52402 487 582 1.26E-24 T 28-03-2018 APY29_RS00380 4b2b4463d4dc75d43e82283165b5eef1 641 Pfam PF00733 Asparagine synthase 239 636 5.1E-44 T 28-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 APY29_RS00380 4b2b4463d4dc75d43e82283165b5eef1 641 PIRSF PIRSF001589 1 638 4.6E-39 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 APY29_RS18435 bcc5d78bd1846674d07b204b9c8fcd63 213 Pfam PF13409 Glutathione S-transferase, N-terminal domain 14 78 1.0E-10 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APY29_RS18435 bcc5d78bd1846674d07b204b9c8fcd63 213 Gene3D G3DSA:1.20.1050.10 100 203 3.2E-16 T 28-03-2018 APY29_RS18435 bcc5d78bd1846674d07b204b9c8fcd63 213 Gene3D G3DSA:3.40.30.10 1 99 1.5E-16 T 28-03-2018 APY29_RS18435 bcc5d78bd1846674d07b204b9c8fcd63 213 SUPERFAMILY SSF52833 7 87 1.25E-16 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS18435 bcc5d78bd1846674d07b204b9c8fcd63 213 SUPERFAMILY SSF47616 86 203 2.97E-12 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like APY29_RS11320 494733dffe9005b8b74523e8825c60eb 448 SUPERFAMILY SSF53474 5 180 8.36E-18 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS11320 494733dffe9005b8b74523e8825c60eb 448 Pfam PF01764 Lipase (class 3) 62 145 1.9E-5 T 28-03-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 APY29_RS11320 494733dffe9005b8b74523e8825c60eb 448 Gene3D G3DSA:3.40.50.1820 3 233 3.4E-18 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS17215 8d4997d2ace6f9a1f567bc6dc769c891 176 Gene3D G3DSA:1.10.10.10 2 176 5.5E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS11385 5a663414c8abc71db09bffd001e3d6ba 148 Pfam PF07511 Protein of unknown function (DUF1525) 35 145 1.0E-40 T 28-03-2018 IPR011090 Integrating conjugative element protein, PFL4709 APY29_RS11385 5a663414c8abc71db09bffd001e3d6ba 148 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 35 144 3.1E-41 T 28-03-2018 IPR011090 Integrating conjugative element protein, PFL4709 APY29_RS18520 9380d379da877dcf8dd3eace4f68ca0e 492 Gene3D G3DSA:3.40.50.980 3 150 2.9E-33 T 28-03-2018 APY29_RS18520 9380d379da877dcf8dd3eace4f68ca0e 492 Pfam PF00501 AMP-binding enzyme 29 395 4.1E-83 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APY29_RS18520 9380d379da877dcf8dd3eace4f68ca0e 492 Pfam PF13193 AMP-binding enzyme C-terminal domain 404 478 5.1E-19 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain APY29_RS18520 9380d379da877dcf8dd3eace4f68ca0e 492 Gene3D G3DSA:3.30.300.30 390 492 2.0E-29 T 28-03-2018 APY29_RS18520 9380d379da877dcf8dd3eace4f68ca0e 492 SUPERFAMILY SSF56801 6 490 2.62E-132 T 28-03-2018 APY29_RS18520 9380d379da877dcf8dd3eace4f68ca0e 492 Gene3D G3DSA:3.40.50.980 151 309 2.9E-32 T 28-03-2018 APY29_RS18520 9380d379da877dcf8dd3eace4f68ca0e 492 ProSitePatterns PS00455 Putative AMP-binding domain signature. 146 157 - T 28-03-2018 IPR020845 AMP-binding, conserved site APY29_RS18520 9380d379da877dcf8dd3eace4f68ca0e 492 Gene3D G3DSA:2.30.38.10 316 388 1.5E-25 T 28-03-2018 APY29_RS19020 87dd6b638ace19534919642821fbf8c4 412 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 174 7.4E-40 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 APY29_RS19020 87dd6b638ace19534919642821fbf8c4 412 SUPERFAMILY SSF52490 15 210 1.57E-69 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 APY29_RS19020 87dd6b638ace19534919642821fbf8c4 412 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 328 3.0E-130 T 28-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 APY29_RS19020 87dd6b638ace19534919642821fbf8c4 412 SMART SM00865 209 327 6.2E-57 T 28-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 APY29_RS19020 87dd6b638ace19534919642821fbf8c4 412 Pfam PF12327 FtsZ family, C-terminal domain 224 318 2.9E-38 T 28-03-2018 IPR024757 Cell division protein FtsZ, C-terminal APY29_RS19020 87dd6b638ace19534919642821fbf8c4 412 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 11 349 37.688 T 28-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 APY29_RS19020 87dd6b638ace19534919642821fbf8c4 412 PRINTS PR00423 Cell division protein FtsZ signature 191 213 3.9E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 APY29_RS19020 87dd6b638ace19534919642821fbf8c4 412 PRINTS PR00423 Cell division protein FtsZ signature 128 149 3.9E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 APY29_RS19020 87dd6b638ace19534919642821fbf8c4 412 PRINTS PR00423 Cell division protein FtsZ signature 214 235 3.9E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 APY29_RS19020 87dd6b638ace19534919642821fbf8c4 412 PRINTS PR00423 Cell division protein FtsZ signature 100 120 3.9E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 APY29_RS19020 87dd6b638ace19534919642821fbf8c4 412 SUPERFAMILY SSF55307 206 321 7.78E-43 T 28-03-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 APY29_RS19020 87dd6b638ace19534919642821fbf8c4 412 ProSitePatterns PS01135 FtsZ protein signature 2. 99 120 - T 28-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 APY29_RS19020 87dd6b638ace19534919642821fbf8c4 412 SMART SM00864 15 207 5.5E-112 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 APY29_RS19020 87dd6b638ace19534919642821fbf8c4 412 Gene3D G3DSA:3.30.1330.20 217 327 4.2E-44 T 28-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 APY29_RS19020 87dd6b638ace19534919642821fbf8c4 412 Gene3D G3DSA:3.40.50.1440 7 216 2.0E-43 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 APY29_RS22100 febe5fe28575d6f4f1b82b5c071cc3dd 575 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 172 5.3E-43 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APY29_RS22100 febe5fe28575d6f4f1b82b5c071cc3dd 575 Gene3D G3DSA:3.40.50.970 335 535 4.5E-37 T 28-03-2018 APY29_RS22100 febe5fe28575d6f4f1b82b5c071cc3dd 575 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 420 439 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 APY29_RS22100 febe5fe28575d6f4f1b82b5c071cc3dd 575 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 321 8.2E-30 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APY29_RS22100 febe5fe28575d6f4f1b82b5c071cc3dd 575 SUPERFAMILY SSF52518 4 180 4.39E-43 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold APY29_RS22100 febe5fe28575d6f4f1b82b5c071cc3dd 575 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 383 529 2.8E-38 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APY29_RS22100 febe5fe28575d6f4f1b82b5c071cc3dd 575 Gene3D G3DSA:3.40.50.970 1 185 8.0E-41 T 28-03-2018 APY29_RS22100 febe5fe28575d6f4f1b82b5c071cc3dd 575 SUPERFAMILY SSF52518 360 564 3.37E-58 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold APY29_RS22100 febe5fe28575d6f4f1b82b5c071cc3dd 575 Gene3D G3DSA:3.40.50.1220 186 334 1.5E-35 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain APY29_RS22100 febe5fe28575d6f4f1b82b5c071cc3dd 575 SUPERFAMILY SSF52467 184 352 3.07E-44 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain APY29_RS07115 5f2d4b4164a432d3536b8443558f0758 1048 Gene3D G3DSA:2.170.130.10 36 195 7.3E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS07115 5f2d4b4164a432d3536b8443558f0758 1048 Pfam PF00593 TonB dependent receptor 475 1046 1.7E-32 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS07115 5f2d4b4164a432d3536b8443558f0758 1048 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 45 1048 7.9E-272 T 28-03-2018 IPR010104 Bacterial TonB-dependent receptor APY29_RS07115 5f2d4b4164a432d3536b8443558f0758 1048 Gene3D G3DSA:2.40.170.20 213 1048 5.1E-67 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS07115 5f2d4b4164a432d3536b8443558f0758 1048 SUPERFAMILY SSF56935 299 435 7.84E-86 T 28-03-2018 APY29_RS07115 5f2d4b4164a432d3536b8443558f0758 1048 SUPERFAMILY SSF56935 578 788 7.84E-86 T 28-03-2018 APY29_RS07115 5f2d4b4164a432d3536b8443558f0758 1048 SUPERFAMILY SSF56935 885 1048 7.84E-86 T 28-03-2018 APY29_RS07115 5f2d4b4164a432d3536b8443558f0758 1048 SUPERFAMILY SSF56935 34 252 7.84E-86 T 28-03-2018 APY29_RS07115 5f2d4b4164a432d3536b8443558f0758 1048 SUPERFAMILY SSF56935 478 537 7.84E-86 T 28-03-2018 APY29_RS07115 5f2d4b4164a432d3536b8443558f0758 1048 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 182 2.3E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS09730 05dba42dc0f2fd4c1df5b83081344a5b 281 SUPERFAMILY SSF53927 16 271 3.91E-82 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 APY29_RS09730 05dba42dc0f2fd4c1df5b83081344a5b 281 Gene3D G3DSA:3.40.140.10 136 275 1.8E-49 T 28-03-2018 APY29_RS09730 05dba42dc0f2fd4c1df5b83081344a5b 281 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 30 272 3.1E-66 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 APY29_RS09730 05dba42dc0f2fd4c1df5b83081344a5b 281 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 12 272 35.278 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 APY29_RS09730 05dba42dc0f2fd4c1df5b83081344a5b 281 Gene3D G3DSA:3.10.20.10 36 122 3.3E-21 T 28-03-2018 APY29_RS09730 05dba42dc0f2fd4c1df5b83081344a5b 281 Pfam PF02634 FdhD/NarQ family 34 271 2.9E-81 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 APY29_RS09730 05dba42dc0f2fd4c1df5b83081344a5b 281 PIRSF PIRSF015626 1 274 9.5E-89 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 APY29_RS07885 01af166f0c9b218c5a11725718f9611d 294 SUPERFAMILY SSF56317 1 275 3.4E-48 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APY29_RS07885 01af166f0c9b218c5a11725718f9611d 294 Pfam PF00795 Carbon-nitrogen hydrolase 2 213 3.4E-19 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APY29_RS07885 01af166f0c9b218c5a11725718f9611d 294 Gene3D G3DSA:3.60.110.10 1 290 1.3E-42 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APY29_RS09180 49aca63989de4793f316fafa38c4c0c0 349 Gene3D G3DSA:3.40.50.2000 83 313 2.0E-12 T 28-03-2018 APY29_RS09180 49aca63989de4793f316fafa38c4c0c0 349 SUPERFAMILY SSF53756 50 340 2.75E-15 T 28-03-2018 APY29_RS09180 49aca63989de4793f316fafa38c4c0c0 349 Pfam PF13692 Glycosyl transferases group 1 171 276 1.5E-6 T 28-03-2018 APY29_RS18950 66f6dc68d63987a36c634d676d33c851 311 SUPERFAMILY SSF51735 7 173 5.3E-35 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS18950 66f6dc68d63987a36c634d676d33c851 311 Gene3D G3DSA:3.40.50.720 1 131 1.1E-25 T 28-03-2018 APY29_RS18950 66f6dc68d63987a36c634d676d33c851 311 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 117 2.7E-17 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 APY29_RS18950 66f6dc68d63987a36c634d676d33c851 311 Gene3D G3DSA:3.30.360.10 132 309 8.6E-24 T 28-03-2018 APY29_RS06720 e88ab52a1d6f79e421ecca32cb049d4d 431 SUPERFAMILY SSF90123 3 188 3.66E-33 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS06720 e88ab52a1d6f79e421ecca32cb049d4d 431 SUPERFAMILY SSF52540 190 411 2.19E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS06720 e88ab52a1d6f79e421ecca32cb049d4d 431 ProSitePatterns PS00211 ABC transporters family signature. 336 350 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS06720 e88ab52a1d6f79e421ecca32cb049d4d 431 Gene3D G3DSA:1.20.1560.10 2 186 1.7E-24 T 28-03-2018 APY29_RS06720 e88ab52a1d6f79e421ecca32cb049d4d 431 SMART SM00382 224 408 8.3E-20 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS06720 e88ab52a1d6f79e421ecca32cb049d4d 431 Gene3D G3DSA:3.40.50.300 194 422 3.6E-69 T 28-03-2018 APY29_RS06720 e88ab52a1d6f79e421ecca32cb049d4d 431 Pfam PF00005 ABC transporter 216 364 1.9E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS06720 e88ab52a1d6f79e421ecca32cb049d4d 431 Pfam PF00664 ABC transporter transmembrane region 6 150 3.4E-19 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS02590 771753ca1f923de3ff7f1d4bb6d1d40e 266 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 28-03-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 APY29_RS02590 771753ca1f923de3ff7f1d4bb6d1d40e 266 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 264 1.8E-71 T 28-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APY29_RS02590 771753ca1f923de3ff7f1d4bb6d1d40e 266 Gene3D G3DSA:3.60.10.10 1 265 2.8E-50 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS02590 771753ca1f923de3ff7f1d4bb6d1d40e 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 257 1.6E-18 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS02590 771753ca1f923de3ff7f1d4bb6d1d40e 266 SUPERFAMILY SSF56219 1 264 1.57E-75 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS02590 771753ca1f923de3ff7f1d4bb6d1d40e 266 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 262 5.7E-64 T 28-03-2018 APY29_RS05495 6889af43ad5c78a53d5b55ad9c693097 206 Gene3D G3DSA:2.40.160.20 23 206 5.6E-28 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APY29_RS05495 6889af43ad5c78a53d5b55ad9c693097 206 Pfam PF03922 OmpW family 25 206 5.6E-44 T 28-03-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 APY29_RS05495 6889af43ad5c78a53d5b55ad9c693097 206 SUPERFAMILY SSF56925 24 206 2.43E-24 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APY29_RS14525 fc6e26ab70d2d7f243563afe6a7465ea 332 Pfam PF04471 Restriction endonuclease 44 150 6.4E-10 T 28-03-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 APY29_RS14525 fc6e26ab70d2d7f243563afe6a7465ea 332 Gene3D G3DSA:3.40.1350.10 38 149 8.6E-6 T 28-03-2018 APY29_RS14525 fc6e26ab70d2d7f243563afe6a7465ea 332 SUPERFAMILY SSF52980 46 153 1.55E-5 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 APY29_RS23000 b839ec4b04ac6fe9086492f7bdfb6d3d 200 SUPERFAMILY SSF55620 7 195 3.56E-75 T 28-03-2018 APY29_RS23000 b839ec4b04ac6fe9086492f7bdfb6d3d 200 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 17 194 9.0E-66 T 28-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 APY29_RS23000 b839ec4b04ac6fe9086492f7bdfb6d3d 200 Pfam PF01227 GTP cyclohydrolase I 17 194 5.2E-73 T 28-03-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 APY29_RS23000 b839ec4b04ac6fe9086492f7bdfb6d3d 200 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 74 90 - T 28-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 APY29_RS23000 b839ec4b04ac6fe9086492f7bdfb6d3d 200 Gene3D G3DSA:3.30.1130.10 63 197 1.1E-53 T 28-03-2018 APY29_RS23000 b839ec4b04ac6fe9086492f7bdfb6d3d 200 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 12 195 39.166 T 28-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 APY29_RS23000 b839ec4b04ac6fe9086492f7bdfb6d3d 200 Gene3D G3DSA:1.10.286.10 14 62 1.9E-22 T 28-03-2018 APY29_RS23000 b839ec4b04ac6fe9086492f7bdfb6d3d 200 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 122 132 - T 28-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 APY29_RS19380 edb052c977bc7d79b9ab7434c1dc4b28 659 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 55 505 2.4E-154 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 APY29_RS19380 edb052c977bc7d79b9ab7434c1dc4b28 659 ProSitePatterns PS01303 BCCT family of transporters signature. 319 328 - T 28-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 APY29_RS19380 edb052c977bc7d79b9ab7434c1dc4b28 659 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 17 505 2.2E-177 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 APY29_RS13580 3c386fd8966e3db86a19743b3309922c 632 Pfam PF01522 Polysaccharide deacetylase 86 251 3.3E-24 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 APY29_RS13580 3c386fd8966e3db86a19743b3309922c 632 Gene3D G3DSA:3.20.20.370 52 501 1.1E-43 T 28-03-2018 APY29_RS13580 3c386fd8966e3db86a19743b3309922c 632 SUPERFAMILY SSF88713 206 252 2.75E-33 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APY29_RS13580 3c386fd8966e3db86a19743b3309922c 632 SUPERFAMILY SSF88713 48 179 2.75E-33 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APY29_RS13580 3c386fd8966e3db86a19743b3309922c 632 SUPERFAMILY SSF88713 379 445 2.75E-33 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APY29_RS13580 3c386fd8966e3db86a19743b3309922c 632 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 312 463 6.0E-68 T 28-03-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal APY29_RS13580 3c386fd8966e3db86a19743b3309922c 632 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 473 604 9.5E-45 T 28-03-2018 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal APY29_RS13580 3c386fd8966e3db86a19743b3309922c 632 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 30 624 2.7E-246 T 28-03-2018 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0042710 APY29_RS13725 452012600636f61ed9c68c31008535f7 114 Gene3D G3DSA:3.40.1620.10 21 61 5.2E-10 T 28-03-2018 APY29_RS13725 452012600636f61ed9c68c31008535f7 114 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 26 61 6.6E-9 T 28-03-2018 APY29_RS13725 452012600636f61ed9c68c31008535f7 114 SUPERFAMILY SSF143120 23 70 5.23E-9 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM APY29_RS13725 452012600636f61ed9c68c31008535f7 114 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 25 74 3.5E-9 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM APY29_RS08000 80a1707e9491e4bcba8fdfeb6ea9ad0d 138 Pfam PF03203 MerC mercury resistance protein 11 123 2.1E-25 T 28-03-2018 IPR004891 MerC mercury resistance protein APY29_RS19180 e2b23184ec45b2dd85b21786c02893eb 30 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 4 30 7.3E-11 T 28-03-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 APY29_RS04730 b8f527972dcf998361789fdda292926e 473 Pfam PF13437 HlyD family secretion protein 325 426 4.1E-18 T 28-03-2018 APY29_RS04730 b8f527972dcf998361789fdda292926e 473 Gene3D G3DSA:2.40.50.100 89 355 7.7E-17 T 28-03-2018 APY29_RS04730 b8f527972dcf998361789fdda292926e 473 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 54 473 3.7E-119 T 28-03-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 APY29_RS04730 b8f527972dcf998361789fdda292926e 473 Pfam PF13533 Biotin-lipoyl like 105 138 4.8E-7 T 28-03-2018 APY29_RS04730 b8f527972dcf998361789fdda292926e 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 107 127 3.5E-62 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APY29_RS04730 b8f527972dcf998361789fdda292926e 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 337 358 3.5E-62 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APY29_RS04730 b8f527972dcf998361789fdda292926e 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 452 472 3.5E-62 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APY29_RS04730 b8f527972dcf998361789fdda292926e 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 65 88 3.5E-62 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APY29_RS04730 b8f527972dcf998361789fdda292926e 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 370 394 3.5E-62 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APY29_RS04730 b8f527972dcf998361789fdda292926e 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 437 452 3.5E-62 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APY29_RS04730 b8f527972dcf998361789fdda292926e 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 394 417 3.5E-62 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APY29_RS19680 9fceb1c7d904b4a80f83cafc63ad0baa 463 Pfam PF00295 Glycosyl hydrolases family 28 142 415 4.7E-43 T 28-03-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 APY29_RS19680 9fceb1c7d904b4a80f83cafc63ad0baa 463 SMART SM00710 224 250 1400.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat APY29_RS19680 9fceb1c7d904b4a80f83cafc63ad0baa 463 SMART SM00710 277 297 190.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat APY29_RS19680 9fceb1c7d904b4a80f83cafc63ad0baa 463 SMART SM00710 251 272 52.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat APY29_RS19680 9fceb1c7d904b4a80f83cafc63ad0baa 463 SMART SM00710 303 333 1100.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat APY29_RS19680 9fceb1c7d904b4a80f83cafc63ad0baa 463 SUPERFAMILY SSF51126 54 413 1.18E-58 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS19680 9fceb1c7d904b4a80f83cafc63ad0baa 463 Gene3D G3DSA:2.160.20.10 60 437 2.6E-60 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS01070 dc5342283bcc2949da2e5a60f5879b5a 194 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 17 176 5.3E-46 T 28-03-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 APY29_RS01070 dc5342283bcc2949da2e5a60f5879b5a 194 SUPERFAMILY SSF52540 13 178 4.52E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS01070 dc5342283bcc2949da2e5a60f5879b5a 194 Gene3D G3DSA:3.40.50.300 16 184 1.1E-33 T 28-03-2018 APY29_RS01070 dc5342283bcc2949da2e5a60f5879b5a 194 Pfam PF13671 AAA domain 17 150 1.8E-13 T 28-03-2018 APY29_RS14990 7732269c482baa8bc0995c27bfda7ead 379 Pfam PF02574 Homocysteine S-methyltransferase 37 363 7.0E-81 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 APY29_RS14990 7732269c482baa8bc0995c27bfda7ead 379 SUPERFAMILY SSF82282 28 56 1.03E-99 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 APY29_RS14990 7732269c482baa8bc0995c27bfda7ead 379 SUPERFAMILY SSF82282 89 374 1.03E-99 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 APY29_RS14990 7732269c482baa8bc0995c27bfda7ead 379 Gene3D G3DSA:3.20.20.330 22 375 2.3E-114 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 APY29_RS14990 7732269c482baa8bc0995c27bfda7ead 379 PIRSF PIRSF037505 316 377 0.001 T 28-03-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 APY29_RS14990 7732269c482baa8bc0995c27bfda7ead 379 PIRSF PIRSF037505 94 164 2.6E-4 T 28-03-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 APY29_RS06435 9efd45da746f828074fe25d7acb7da28 236 SUPERFAMILY SSF55174 5 49 7.72E-10 T 28-03-2018 APY29_RS06435 9efd45da746f828074fe25d7acb7da28 236 Pfam PF01479 S4 domain 6 41 1.5E-6 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS06435 9efd45da746f828074fe25d7acb7da28 236 Gene3D G3DSA:3.30.2350.10 63 235 1.4E-21 T 28-03-2018 APY29_RS06435 9efd45da746f828074fe25d7acb7da28 236 Gene3D G3DSA:3.10.290.10 2 62 5.6E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS06435 9efd45da746f828074fe25d7acb7da28 236 SUPERFAMILY SSF55120 65 233 9.83E-18 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS21660 b66020c59c3ac410f86f6aa24836d9f8 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 395 410 3.5E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS21660 b66020c59c3ac410f86f6aa24836d9f8 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 340 358 3.5E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS21660 b66020c59c3ac410f86f6aa24836d9f8 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 32 57 3.5E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS21660 b66020c59c3ac410f86f6aa24836d9f8 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 120 139 3.5E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS21660 b66020c59c3ac410f86f6aa24836d9f8 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 364 382 3.5E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS21660 b66020c59c3ac410f86f6aa24836d9f8 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 219 235 3.5E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS21660 b66020c59c3ac410f86f6aa24836d9f8 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 101 119 3.5E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS21660 b66020c59c3ac410f86f6aa24836d9f8 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 248 267 3.5E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS21660 b66020c59c3ac410f86f6aa24836d9f8 526 Pfam PF01019 Gamma-glutamyltranspeptidase 25 521 5.2E-126 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS21660 b66020c59c3ac410f86f6aa24836d9f8 526 SUPERFAMILY SSF56235 4 526 1.18E-148 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APY29_RS15530 3f55fc9480f0dd57308ca3eebd2c5d2f 526 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 29 507 8.9E-155 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 APY29_RS15530 3f55fc9480f0dd57308ca3eebd2c5d2f 526 Gene3D G3DSA:1.20.1250.20 269 516 8.3E-23 T 28-03-2018 APY29_RS15530 3f55fc9480f0dd57308ca3eebd2c5d2f 526 PRINTS PR01036 Tetracycline resistance protein TetB signature 32 56 1.6E-5 T 28-03-2018 APY29_RS15530 3f55fc9480f0dd57308ca3eebd2c5d2f 526 PRINTS PR01036 Tetracycline resistance protein TetB signature 153 177 1.6E-5 T 28-03-2018 APY29_RS15530 3f55fc9480f0dd57308ca3eebd2c5d2f 526 PRINTS PR01036 Tetracycline resistance protein TetB signature 219 237 1.6E-5 T 28-03-2018 APY29_RS15530 3f55fc9480f0dd57308ca3eebd2c5d2f 526 Pfam PF07690 Major Facilitator Superfamily 33 427 9.8E-53 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS15530 3f55fc9480f0dd57308ca3eebd2c5d2f 526 SUPERFAMILY SSF103473 265 436 1.83E-66 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS15530 3f55fc9480f0dd57308ca3eebd2c5d2f 526 SUPERFAMILY SSF103473 486 511 1.83E-66 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS15530 3f55fc9480f0dd57308ca3eebd2c5d2f 526 SUPERFAMILY SSF103473 26 213 1.83E-66 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS15530 3f55fc9480f0dd57308ca3eebd2c5d2f 526 Gene3D G3DSA:1.20.1250.20 26 216 1.1E-36 T 28-03-2018 APY29_RS03895 1032667fd21656b0210848cb9062f403 189 PIRSF PIRSF026640 4 189 2.4E-65 T 28-03-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 APY29_RS03895 1032667fd21656b0210848cb9062f403 189 SMART SM00830 29 107 1.1E-14 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 APY29_RS03895 1032667fd21656b0210848cb9062f403 189 Gene3D G3DSA:1.20.59.10 113 150 0.45 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 APY29_RS03895 1032667fd21656b0210848cb9062f403 189 Gene3D G3DSA:1.20.59.10 35 112 9.4E-16 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 APY29_RS03895 1032667fd21656b0210848cb9062f403 189 Pfam PF01817 Chorismate mutase type II 37 105 2.1E-7 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 APY29_RS03895 1032667fd21656b0210848cb9062f403 189 SUPERFAMILY SSF48600 37 188 6.56E-40 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 APY29_RS03895 1032667fd21656b0210848cb9062f403 189 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 31 143 2.0E-41 T 28-03-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 APY29_RS19350 29ade89f5a747f1ba3c247c95aa99e9f 214 Gene3D G3DSA:3.40.50.300 78 193 3.9E-13 T 28-03-2018 APY29_RS19350 29ade89f5a747f1ba3c247c95aa99e9f 214 Pfam PF01926 50S ribosome-binding GTPase 27 135 2.1E-18 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 APY29_RS19350 29ade89f5a747f1ba3c247c95aa99e9f 214 Gene3D G3DSA:3.40.50.300 3 77 3.7E-11 T 28-03-2018 APY29_RS19350 29ade89f5a747f1ba3c247c95aa99e9f 214 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 9 191 6.1E-68 T 28-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 APY29_RS19350 29ade89f5a747f1ba3c247c95aa99e9f 214 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 13 197 26.187 T 28-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 APY29_RS19350 29ade89f5a747f1ba3c247c95aa99e9f 214 SUPERFAMILY SSF52540 16 195 1.83E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS07700 962dc71dc2749c583c543c5e0f3e1088 223 SMART SM00248 147 177 54.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS07700 962dc71dc2749c583c543c5e0f3e1088 223 SMART SM00248 47 76 16.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS07700 962dc71dc2749c583c543c5e0f3e1088 223 SMART SM00248 80 109 0.042 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS07700 962dc71dc2749c583c543c5e0f3e1088 223 SMART SM00248 114 143 10.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 APY29_RS07700 962dc71dc2749c583c543c5e0f3e1088 223 SUPERFAMILY SSF48403 18 195 8.24E-30 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS07700 962dc71dc2749c583c543c5e0f3e1088 223 Gene3D G3DSA:1.25.40.20 129 192 1.1E-13 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS07700 962dc71dc2749c583c543c5e0f3e1088 223 Gene3D G3DSA:1.25.40.20 14 128 2.1E-24 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS07700 962dc71dc2749c583c543c5e0f3e1088 223 Pfam PF12796 Ankyrin repeats (3 copies) 52 144 5.1E-11 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain APY29_RS10050 89c00f70444bda36c6cb1e1488ee6594 166 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 138 9.0E-33 T 28-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 APY29_RS10050 89c00f70444bda36c6cb1e1488ee6594 166 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 128 2.6E-31 T 28-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 APY29_RS10050 89c00f70444bda36c6cb1e1488ee6594 166 Gene3D G3DSA:3.40.50.300 1 152 1.9E-38 T 28-03-2018 APY29_RS10050 89c00f70444bda36c6cb1e1488ee6594 166 SUPERFAMILY SSF52540 30 139 1.73E-15 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS08905 afd50cb21af714c8c1992d59b9b44f15 461 Pfam PF14793 Domain of unknown function (DUF4478) 17 122 1.2E-39 T 28-03-2018 IPR027820 Domain of unknown function DUF4478 APY29_RS08905 afd50cb21af714c8c1992d59b9b44f15 461 Gene3D G3DSA:3.40.50.450 133 459 2.7E-92 T 28-03-2018 APY29_RS08905 afd50cb21af714c8c1992d59b9b44f15 461 SUPERFAMILY SSF102405 130 337 1.34E-39 T 28-03-2018 APY29_RS08905 afd50cb21af714c8c1992d59b9b44f15 461 Pfam PF11892 Domain of unknown function (DUF3412) 342 460 1.7E-52 T 28-03-2018 IPR021826 Domain of unknown function DUF3412 APY29_RS08905 afd50cb21af714c8c1992d59b9b44f15 461 Pfam PF03641 Possible lysine decarboxylase 198 337 7.1E-28 T 28-03-2018 IPR031100 LOG family APY29_RS08905 afd50cb21af714c8c1992d59b9b44f15 461 Gene3D G3DSA:3.30.1850.10 16 124 3.6E-41 T 28-03-2018 IPR027820 Domain of unknown function DUF4478 APY29_RS06685 1cf7c7598d3a0e52ed58fdaa0a835311 487 Gene3D G3DSA:1.50.10.10 56 487 1.8E-166 T 28-03-2018 APY29_RS06685 1cf7c7598d3a0e52ed58fdaa0a835311 487 PIRSF PIRSF028846 50 486 2.2E-198 T 28-03-2018 IPR008313 Metal-independent alpha-mannosidase APY29_RS06685 1cf7c7598d3a0e52ed58fdaa0a835311 487 SUPERFAMILY SSF48208 42 484 3.7E-169 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 APY29_RS06685 1cf7c7598d3a0e52ed58fdaa0a835311 487 SMART SM01149 72 475 1.0E-251 T 28-03-2018 IPR008313 Metal-independent alpha-mannosidase APY29_RS06685 1cf7c7598d3a0e52ed58fdaa0a835311 487 Pfam PF06824 Metal-independent alpha-mannosidase (GH125) 72 474 1.1E-149 T 28-03-2018 IPR008313 Metal-independent alpha-mannosidase APY29_RS06115 f2074479b638acb0b2e97825ae668dff 203 Gene3D G3DSA:3.40.50.300 11 203 4.8E-64 T 28-03-2018 APY29_RS06115 f2074479b638acb0b2e97825ae668dff 203 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 33 202 2.0E-54 T 28-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 APY29_RS06115 f2074479b638acb0b2e97825ae668dff 203 PIRSF PIRSF015617 6 203 3.0E-65 T 28-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 APY29_RS06115 f2074479b638acb0b2e97825ae668dff 203 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 26 7.8E-7 T 28-03-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 APY29_RS06115 f2074479b638acb0b2e97825ae668dff 203 SUPERFAMILY SSF52540 12 202 1.24E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS06115 f2074479b638acb0b2e97825ae668dff 203 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 32 202 5.3E-64 T 28-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 APY29_RS20295 14a8535d149f3cff80055857785fa262 196 Gene3D G3DSA:3.40.109.10 2 196 2.7E-35 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 APY29_RS20295 14a8535d149f3cff80055857785fa262 196 SUPERFAMILY SSF55469 10 195 1.1E-43 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 APY29_RS20295 14a8535d149f3cff80055857785fa262 196 Pfam PF00881 Nitroreductase family 16 158 2.3E-15 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 APY29_RS20295 14a8535d149f3cff80055857785fa262 196 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 196 47.107 T 28-03-2018 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 APY29_RS18180 ab50d983a5a4f4c0a1e1b7549970dcbb 217 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 4 215 24.556 T 28-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 APY29_RS18180 ab50d983a5a4f4c0a1e1b7549970dcbb 217 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 51 214 2.0E-24 T 28-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 APY29_RS18180 ab50d983a5a4f4c0a1e1b7549970dcbb 217 Pfam PF03550 Outer membrane lipoprotein LolB 58 213 3.9E-39 T 28-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 APY29_RS18180 ab50d983a5a4f4c0a1e1b7549970dcbb 217 Gene3D G3DSA:2.50.20.10 37 216 3.5E-39 T 28-03-2018 APY29_RS18180 ab50d983a5a4f4c0a1e1b7549970dcbb 217 SUPERFAMILY SSF89392 44 215 4.32E-38 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX APY29_RS07280 3086e6a4e21ce9d3e6f54f426bedb0dd 316 SUPERFAMILY SSF53795 137 306 5.19E-32 T 28-03-2018 APY29_RS07280 3086e6a4e21ce9d3e6f54f426bedb0dd 316 SUPERFAMILY SSF75138 10 136 4.05E-30 T 28-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like APY29_RS07280 3086e6a4e21ce9d3e6f54f426bedb0dd 316 Pfam PF02603 HPr Serine kinase N terminus 5 132 4.1E-23 T 28-03-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 APY29_RS07280 3086e6a4e21ce9d3e6f54f426bedb0dd 316 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 4 314 35.969 T 28-03-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 APY29_RS07280 3086e6a4e21ce9d3e6f54f426bedb0dd 316 Gene3D G3DSA:3.40.1390.20 4 137 4.2E-29 T 28-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like APY29_RS07280 3086e6a4e21ce9d3e6f54f426bedb0dd 316 Pfam PF07475 HPr Serine kinase C-terminal domain 135 306 1.6E-56 T 28-03-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 APY29_RS07280 3086e6a4e21ce9d3e6f54f426bedb0dd 316 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 6 309 1.2E-100 T 28-03-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 APY29_RS07280 3086e6a4e21ce9d3e6f54f426bedb0dd 316 Gene3D G3DSA:3.40.50.300 138 298 1.4E-39 T 28-03-2018 APY29_RS21370 0086bad01168bdad35f1603ca297d145 176 Gene3D G3DSA:1.10.10.10 28 175 5.9E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS21370 0086bad01168bdad35f1603ca297d145 176 SUPERFAMILY SSF46785 35 171 2.83E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS21370 0086bad01168bdad35f1603ca297d145 176 Pfam PF12802 MarR family 67 124 2.0E-9 T 28-03-2018 APY29_RS21370 0086bad01168bdad35f1603ca297d145 176 SMART SM00347 61 161 8.6E-14 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS06055 bb79482db57ed67c2c979a8a2ce4a853 235 SUPERFAMILY SSF47616 104 227 3.55E-23 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like APY29_RS06055 bb79482db57ed67c2c979a8a2ce4a853 235 Gene3D G3DSA:3.40.30.10 1 100 1.7E-13 T 28-03-2018 APY29_RS06055 bb79482db57ed67c2c979a8a2ce4a853 235 Pfam PF14497 Glutathione S-transferase, C-terminal domain 109 215 2.0E-28 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal APY29_RS06055 bb79482db57ed67c2c979a8a2ce4a853 235 SUPERFAMILY SSF52833 1 81 1.86E-14 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS06055 bb79482db57ed67c2c979a8a2ce4a853 235 Gene3D G3DSA:1.20.1050.10 101 204 1.3E-21 T 28-03-2018 APY29_RS22210 64263b810e8f64f27c98c21ac9be79f5 264 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 2 260 15.765 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 APY29_RS22210 64263b810e8f64f27c98c21ac9be79f5 264 Pfam PF02673 Bacitracin resistance protein BacA 7 254 5.2E-67 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 APY29_RS22285 e48c1308aa59d466acf841084a5731f6 1235 Gene3D G3DSA:3.40.50.920 291 416 5.6E-8 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APY29_RS22285 e48c1308aa59d466acf841084a5731f6 1235 SUPERFAMILY SSF52518 458 646 7.65E-12 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold APY29_RS22285 e48c1308aa59d466acf841084a5731f6 1235 Gene3D G3DSA:3.40.920.10 743 955 1.5E-49 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 APY29_RS22285 e48c1308aa59d466acf841084a5731f6 1235 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 752 939 1.6E-21 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 APY29_RS22285 e48c1308aa59d466acf841084a5731f6 1235 SUPERFAMILY SSF52518 67 214 7.65E-12 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold APY29_RS22285 e48c1308aa59d466acf841084a5731f6 1235 SUPERFAMILY SSF53323 744 958 3.14E-29 T 28-03-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 APY29_RS22285 e48c1308aa59d466acf841084a5731f6 1235 Gene3D G3DSA:3.40.50.970 34 290 1.8E-13 T 28-03-2018 APY29_RS22285 e48c1308aa59d466acf841084a5731f6 1235 Gene3D G3DSA:3.40.50.970 462 640 1.3E-30 T 28-03-2018 APY29_RS22285 e48c1308aa59d466acf841084a5731f6 1235 SUPERFAMILY SSF52922 285 413 6.8E-8 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APY29_RS15205 1265e25f4cffb134940d5dbd3a9d0a49 369 Gene3D G3DSA:3.30.450.40 209 368 2.6E-40 T 28-03-2018 IPR029016 GAF domain-like APY29_RS15205 1265e25f4cffb134940d5dbd3a9d0a49 369 Pfam PF01628 HrcA protein C terminal domain 130 349 2.5E-56 T 28-03-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 APY29_RS15205 1265e25f4cffb134940d5dbd3a9d0a49 369 PIRSF PIRSF005485 25 367 1.5E-112 T 28-03-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 APY29_RS15205 1265e25f4cffb134940d5dbd3a9d0a49 369 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 28 99 6.3E-6 T 28-03-2018 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 APY29_RS15205 1265e25f4cffb134940d5dbd3a9d0a49 369 Gene3D G3DSA:1.10.10.10 18 110 1.3E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS15205 1265e25f4cffb134940d5dbd3a9d0a49 369 SUPERFAMILY SSF55781 97 364 3.04E-58 T 28-03-2018 IPR029016 GAF domain-like APY29_RS15205 1265e25f4cffb134940d5dbd3a9d0a49 369 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 27 356 27.941 T 28-03-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 APY29_RS15205 1265e25f4cffb134940d5dbd3a9d0a49 369 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 29 361 2.9E-105 T 28-03-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 APY29_RS15205 1265e25f4cffb134940d5dbd3a9d0a49 369 SUPERFAMILY SSF46785 27 107 7.08E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS13205 28e25b9bcf89f6cb3db7eec452d24483 198 SUPERFAMILY SSF64438 24 169 1.65E-50 T 28-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic APY29_RS13205 28e25b9bcf89f6cb3db7eec452d24483 198 Pfam PF03975 CheD chemotactic sensory transduction 66 165 9.7E-33 T 28-03-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 APY29_RS13205 28e25b9bcf89f6cb3db7eec452d24483 198 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 18 169 29.617 T 28-03-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 APY29_RS17875 b6193a6064c937cbecaedea17bf486f5 328 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 159 321 1.4E-30 T 28-03-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 APY29_RS17875 b6193a6064c937cbecaedea17bf486f5 328 PIRSF PIRSF000102 1 325 2.3E-64 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APY29_RS17875 b6193a6064c937cbecaedea17bf486f5 328 SUPERFAMILY SSF51735 3 157 2.17E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS17875 b6193a6064c937cbecaedea17bf486f5 328 Gene3D G3DSA:3.40.50.720 6 157 3.6E-28 T 28-03-2018 APY29_RS17875 b6193a6064c937cbecaedea17bf486f5 328 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 154 3.2E-35 T 28-03-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 APY29_RS17875 b6193a6064c937cbecaedea17bf486f5 328 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 3 321 1.8E-142 T 28-03-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 APY29_RS17875 b6193a6064c937cbecaedea17bf486f5 328 SUPERFAMILY SSF56327 159 327 3.24E-58 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APY29_RS17875 b6193a6064c937cbecaedea17bf486f5 328 Hamap MF_01517 Malate dehydrogenase [mdh]. 1 327 55.559 T 28-03-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 APY29_RS17875 b6193a6064c937cbecaedea17bf486f5 328 Gene3D G3DSA:3.90.110.10 158 325 8.7E-47 T 28-03-2018 APY29_RS17035 4df026a8b1a3b8830f35cb248456eaf3 73 SUPERFAMILY SSF89447 1 64 2.41E-12 T 28-03-2018 APY29_RS17035 4df026a8b1a3b8830f35cb248456eaf3 73 Gene3D G3DSA:2.10.260.10 3 44 2.7E-11 T 28-03-2018 APY29_RS17035 4df026a8b1a3b8830f35cb248456eaf3 73 TIGRFAM TIGR02609 doc_partner: putative addiction module antidote 3 73 3.1E-26 T 28-03-2018 IPR013432 Putative addiction module antidote APY29_RS17035 4df026a8b1a3b8830f35cb248456eaf3 73 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 46 6.2E-6 T 28-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 APY29_RS17035 4df026a8b1a3b8830f35cb248456eaf3 73 SMART SM00966 6 51 5.5E-6 T 28-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 APY29_RS06490 40495736a8af87675f5c398ab5545074 504 PIRSF PIRSF014728 1 498 1.4E-253 T 28-03-2018 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type APY29_RS06490 40495736a8af87675f5c398ab5545074 504 Gene3D G3DSA:3.40.50.1820 54 375 4.5E-10 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS06490 40495736a8af87675f5c398ab5545074 504 SUPERFAMILY SSF53474 312 374 4.13E-10 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS06490 40495736a8af87675f5c398ab5545074 504 SUPERFAMILY SSF53474 203 259 4.13E-10 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS06490 40495736a8af87675f5c398ab5545074 504 SUPERFAMILY SSF53474 102 169 4.13E-10 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS06490 40495736a8af87675f5c398ab5545074 504 Pfam PF10142 PhoPQ-activated pathogenicity-related protein 49 421 1.9E-130 T 28-03-2018 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type APY29_RS23015 193c589fb591363ab42c42546baa5635 314 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 238 1.3E-33 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 APY29_RS23015 193c589fb591363ab42c42546baa5635 314 Gene3D G3DSA:2.40.50.100 155 288 2.6E-9 T 28-03-2018 APY29_RS23015 193c589fb591363ab42c42546baa5635 314 SUPERFAMILY SSF111369 49 205 1.26E-23 T 28-03-2018 APY29_RS23015 193c589fb591363ab42c42546baa5635 314 Gene3D G3DSA:2.40.50.100 121 154 0.11 T 28-03-2018 APY29_RS23015 193c589fb591363ab42c42546baa5635 314 Gene3D G3DSA:2.40.50.100 51 120 1.6E-14 T 28-03-2018 APY29_RS23015 193c589fb591363ab42c42546baa5635 314 Pfam PF13533 Biotin-lipoyl like 51 99 2.6E-15 T 28-03-2018 APY29_RS23015 193c589fb591363ab42c42546baa5635 314 Pfam PF13437 HlyD family secretion protein 160 239 9.8E-15 T 28-03-2018 APY29_RS02440 b04e91bdad70d65f30e36e814b89284c 92 Pfam PF04380 Membrane fusogenic activity 2 77 1.8E-26 T 28-03-2018 IPR007475 Membrane fusogenic activity APY29_RS12845 2fbe62ccb4ecceb528f74caa1a4bad82 105 Pfam PF02049 Flagellar hook-basal body complex protein FliE 24 104 1.7E-28 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 APY29_RS12845 2fbe62ccb4ecceb528f74caa1a4bad82 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 69 85 1.9E-11 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 APY29_RS12845 2fbe62ccb4ecceb528f74caa1a4bad82 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 90 103 1.9E-11 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 APY29_RS12845 2fbe62ccb4ecceb528f74caa1a4bad82 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 34 50 1.9E-11 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 APY29_RS12845 2fbe62ccb4ecceb528f74caa1a4bad82 105 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 30 103 1.7E-17 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 APY29_RS12845 2fbe62ccb4ecceb528f74caa1a4bad82 105 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 105 16.191 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Pfam PF03377 TAL effector repeat 322 353 2.9E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Pfam PF03377 TAL effector repeat 560 591 2.9E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Pfam PF03377 TAL effector repeat 865 894 1.7E-10 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Pfam PF03377 TAL effector repeat 526 557 5.6E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Pfam PF03377 TAL effector repeat 458 489 1.4E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Pfam PF03377 TAL effector repeat 356 387 3.6E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Pfam PF03377 TAL effector repeat 628 659 1.9E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Pfam PF03377 TAL effector repeat 594 625 1.5E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Pfam PF03377 TAL effector repeat 798 829 2.5E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Pfam PF03377 TAL effector repeat 832 862 1.2E-14 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Pfam PF03377 TAL effector repeat 662 693 1.9E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Pfam PF03377 TAL effector repeat 288 319 5.5E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Pfam PF03377 TAL effector repeat 764 795 2.5E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Pfam PF03377 TAL effector repeat 424 455 2.9E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Pfam PF03377 TAL effector repeat 696 727 3.7E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Pfam PF03377 TAL effector repeat 730 761 5.5E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Pfam PF03377 TAL effector repeat 390 421 2.5E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Pfam PF03377 TAL effector repeat 492 523 3.6E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Pfam PF03377 TAL effector repeat 901 925 0.042 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Gene3D G3DSA:3.40.47.10 257 349 0.005 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Gene3D G3DSA:3.40.47.10 711 778 0.17 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Gene3D G3DSA:3.10.20.90 680 710 0.015 T 28-03-2018 APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Gene3D G3DSA:3.10.20.90 779 815 0.26 T 28-03-2018 APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Gene3D G3DSA:3.10.20.90 409 441 0.024 T 28-03-2018 APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Gene3D G3DSA:3.10.20.90 816 849 0.13 T 28-03-2018 APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Gene3D G3DSA:3.10.20.90 442 476 0.077 T 28-03-2018 APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Gene3D G3DSA:3.10.20.90 646 679 0.18 T 28-03-2018 APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Gene3D G3DSA:3.10.20.90 375 408 0.069 T 28-03-2018 APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Gene3D G3DSA:3.10.20.90 579 611 0.45 T 28-03-2018 APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Gene3D G3DSA:3.10.20.90 850 889 0.17 T 28-03-2018 APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Gene3D G3DSA:3.10.20.90 511 544 0.035 T 28-03-2018 APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Gene3D G3DSA:3.10.20.90 612 645 0.16 T 28-03-2018 APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Gene3D G3DSA:3.10.20.90 477 510 0.042 T 28-03-2018 APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Gene3D G3DSA:3.10.20.90 350 374 0.042 T 28-03-2018 APY29_RS00845 36d8bf6ade7e763d5f3aa9280c25a787 1162 Gene3D G3DSA:3.10.20.90 545 578 0.027 T 28-03-2018 APY29_RS23010 fbede2b3142053ccd8d40cb380fd63df 72 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 1.5E-21 T 28-03-2018 IPR012451 Protein of unknown function DUF1656 APY29_RS14035 35bc70ce63ea317160897a21cec668ef 101 SUPERFAMILY SSF75471 4 98 9.94E-29 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 APY29_RS14035 35bc70ce63ea317160897a21cec668ef 101 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 5 100 1.2E-26 T 28-03-2018 IPR017924 RNA-binding protein YhbY GO:0003723 APY29_RS14035 35bc70ce63ea317160897a21cec668ef 101 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 11 100 1.0E-33 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 APY29_RS14035 35bc70ce63ea317160897a21cec668ef 101 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 88 2.3E-21 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 APY29_RS14035 35bc70ce63ea317160897a21cec668ef 101 Gene3D G3DSA:3.30.110.60 4 100 8.4E-26 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 APY29_RS14035 35bc70ce63ea317160897a21cec668ef 101 SMART SM01103 5 88 2.9E-38 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 APY29_RS01345 0b7900fb77d922485c78472e17473ba1 728 Gene3D G3DSA:1.10.10.160 129 188 2.1E-17 T 28-03-2018 APY29_RS01345 0b7900fb77d922485c78472e17473ba1 728 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 272 5.8E-68 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 APY29_RS01345 0b7900fb77d922485c78472e17473ba1 728 Gene3D G3DSA:3.40.50.300 4 128 3.0E-25 T 28-03-2018 APY29_RS01345 0b7900fb77d922485c78472e17473ba1 728 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 725 0.0 T 28-03-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 APY29_RS01345 0b7900fb77d922485c78472e17473ba1 728 Gene3D G3DSA:3.40.50.300 202 682 2.7E-94 T 28-03-2018 APY29_RS01345 0b7900fb77d922485c78472e17473ba1 728 SUPERFAMILY SSF52540 6 647 9.47E-177 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS01345 0b7900fb77d922485c78472e17473ba1 728 Pfam PF13361 UvrD-like helicase C-terminal domain 278 621 9.8E-74 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APY29_RS17330 728e6367c9c31196c2efd2680edec73f 98 Gene3D G3DSA:1.10.1220.10 23 63 2.2E-12 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APY29_RS17330 728e6367c9c31196c2efd2680edec73f 98 SUPERFAMILY SSF47598 19 60 7.56E-11 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 APY29_RS09340 c619bbea8632dbaac1e9712f18e8e40d 425 Pfam PF01266 FAD dependent oxidoreductase 60 400 9.7E-59 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APY29_RS09340 c619bbea8632dbaac1e9712f18e8e40d 425 SUPERFAMILY SSF54373 261 361 2.49E-14 T 28-03-2018 APY29_RS09340 c619bbea8632dbaac1e9712f18e8e40d 425 Gene3D G3DSA:3.50.50.60 47 424 1.1E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS09340 c619bbea8632dbaac1e9712f18e8e40d 425 SUPERFAMILY SSF51905 59 265 1.09E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS09340 c619bbea8632dbaac1e9712f18e8e40d 425 SUPERFAMILY SSF51905 362 418 1.09E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS15590 8d7485f4f4ed6d59f2fa55db8d51c54a 564 PIRSF PIRSF001589 366 523 1.5E-27 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 APY29_RS15590 8d7485f4f4ed6d59f2fa55db8d51c54a 564 PIRSF PIRSF001589 1 371 6.6E-105 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 APY29_RS15590 8d7485f4f4ed6d59f2fa55db8d51c54a 564 Pfam PF13537 Glutamine amidotransferase domain 50 169 1.3E-40 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain APY29_RS15590 8d7485f4f4ed6d59f2fa55db8d51c54a 564 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 375 3.0E-105 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 APY29_RS15590 8d7485f4f4ed6d59f2fa55db8d51c54a 564 Gene3D G3DSA:3.40.50.620 195 522 2.1E-84 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS15590 8d7485f4f4ed6d59f2fa55db8d51c54a 564 SMART SM01172 5 210 0.0046 T 28-03-2018 IPR024286 Domain of unknown function DUF3700 APY29_RS15590 8d7485f4f4ed6d59f2fa55db8d51c54a 564 SUPERFAMILY SSF52402 212 487 1.7E-74 T 28-03-2018 APY29_RS15590 8d7485f4f4ed6d59f2fa55db8d51c54a 564 Pfam PF00733 Asparagine synthase 214 370 6.3E-57 T 28-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 APY29_RS15590 8d7485f4f4ed6d59f2fa55db8d51c54a 564 Gene3D G3DSA:3.60.20.10 2 194 1.3E-47 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APY29_RS15590 8d7485f4f4ed6d59f2fa55db8d51c54a 564 SUPERFAMILY SSF56235 1 197 1.89E-55 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APY29_RS14970 4235568f3eafc18dd476893317de7b4a 35 SUPERFAMILY SSF47203 8 34 9.67E-7 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APY29_RS14970 4235568f3eafc18dd476893317de7b4a 35 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 8 30 1.7E-6 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APY29_RS14970 4235568f3eafc18dd476893317de7b4a 35 Gene3D G3DSA:1.20.140.10 2 35 3.3E-8 T 28-03-2018 APY29_RS13885 d7bed8dd06ef9ffe8be82f7a1b45e4a4 208 Gene3D G3DSA:3.30.70.260 122 207 5.7E-13 T 28-03-2018 APY29_RS13885 d7bed8dd06ef9ffe8be82f7a1b45e4a4 208 PIRSF PIRSF028103 33 208 7.1E-69 T 28-03-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 APY29_RS13885 d7bed8dd06ef9ffe8be82f7a1b45e4a4 208 Pfam PF13740 ACT domain 36 109 2.1E-13 T 28-03-2018 APY29_RS13885 d7bed8dd06ef9ffe8be82f7a1b45e4a4 208 Gene3D G3DSA:3.30.70.260 51 116 9.6E-4 T 28-03-2018 APY29_RS13885 d7bed8dd06ef9ffe8be82f7a1b45e4a4 208 SUPERFAMILY SSF55021 32 114 2.42E-9 T 28-03-2018 APY29_RS13885 d7bed8dd06ef9ffe8be82f7a1b45e4a4 208 SUPERFAMILY SSF55021 119 207 9.87E-19 T 28-03-2018 APY29_RS08635 e16e2e190c7754f4c254f8b8b5bf75da 341 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 324 7.8E-59 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 APY29_RS08635 e16e2e190c7754f4c254f8b8b5bf75da 341 Gene3D G3DSA:3.30.360.10 146 320 5.9E-75 T 28-03-2018 APY29_RS08635 e16e2e190c7754f4c254f8b8b5bf75da 341 PIRSF PIRSF000148 7 341 3.9E-134 T 28-03-2018 APY29_RS08635 e16e2e190c7754f4c254f8b8b5bf75da 341 Gene3D G3DSA:3.40.50.720 4 145 1.2E-36 T 28-03-2018 APY29_RS08635 e16e2e190c7754f4c254f8b8b5bf75da 341 SUPERFAMILY SSF55347 133 325 5.41E-75 T 28-03-2018 APY29_RS08635 e16e2e190c7754f4c254f8b8b5bf75da 341 SMART SM00859 9 124 1.2E-46 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APY29_RS08635 e16e2e190c7754f4c254f8b8b5bf75da 341 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 9 338 1.5E-135 T 28-03-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 APY29_RS08635 e16e2e190c7754f4c254f8b8b5bf75da 341 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 9 123 1.9E-32 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APY29_RS08635 e16e2e190c7754f4c254f8b8b5bf75da 341 SUPERFAMILY SSF51735 8 161 2.85E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS08635 e16e2e190c7754f4c254f8b8b5bf75da 341 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 7 338 38.342 T 28-03-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 APY29_RS19900 ef2c77e2b81e267d657e2de7650bf381 645 SUPERFAMILY SSF53448 143 436 1.22E-23 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS19900 ef2c77e2b81e267d657e2de7650bf381 645 Pfam PF13632 Glycosyl transferase family group 2 242 465 6.7E-15 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 APY29_RS19900 ef2c77e2b81e267d657e2de7650bf381 645 Gene3D G3DSA:3.90.550.10 122 405 1.4E-23 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS19900 ef2c77e2b81e267d657e2de7650bf381 645 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 6 645 48.851 T 28-03-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 APY29_RS03360 46d902bc18ceee8091f44609f2f453b9 204 Pfam PF13628 Domain of unknown function (DUF4142) 62 196 2.2E-19 T 28-03-2018 IPR025419 Domain of unknown function DUF4142 APY29_RS03360 46d902bc18ceee8091f44609f2f453b9 204 Gene3D G3DSA:1.20.1260.10 52 199 1.1E-11 T 28-03-2018 IPR012347 Ferritin-related APY29_RS06905 b4f1b3380886cea222eac4245b2d036f 651 Pfam PF05170 AsmA family 27 550 2.0E-49 T 28-03-2018 IPR007844 AsmA APY29_RS04840 9c74bc141c1b6b3cf8006c40e7f65569 349 SUPERFAMILY SSF53850 36 309 9.06E-43 T 28-03-2018 APY29_RS04840 9c74bc141c1b6b3cf8006c40e7f65569 349 Pfam PF13531 Bacterial extracellular solute-binding protein 46 294 1.8E-19 T 28-03-2018 APY29_RS04840 9c74bc141c1b6b3cf8006c40e7f65569 349 Gene3D G3DSA:3.40.190.10 150 291 9.9E-20 T 28-03-2018 APY29_RS04840 9c74bc141c1b6b3cf8006c40e7f65569 349 Gene3D G3DSA:3.40.190.10 32 149 4.7E-6 T 28-03-2018 APY29_RS20520 5c9c5197fa623557dbd27ca3b7b2a33c 445 SMART SM00195 301 432 0.0022 T 28-03-2018 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 APY29_RS20520 5c9c5197fa623557dbd27ca3b7b2a33c 445 Pfam PF00782 Dual specificity phosphatase, catalytic domain 339 425 8.3E-9 T 28-03-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 APY29_RS20520 5c9c5197fa623557dbd27ca3b7b2a33c 445 SUPERFAMILY SSF52799 285 419 6.08E-16 T 28-03-2018 IPR029021 Protein-tyrosine phosphatase-like APY29_RS20520 5c9c5197fa623557dbd27ca3b7b2a33c 445 Gene3D G3DSA:3.90.190.10 284 431 7.0E-12 T 28-03-2018 IPR029021 Protein-tyrosine phosphatase-like APY29_RS18160 f00901fb00477efd96e06d7638f8d135 211 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 97 5.0E-48 T 28-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 APY29_RS18160 f00901fb00477efd96e06d7638f8d135 211 Pfam PF01386 Ribosomal L25p family 7 94 2.9E-26 T 28-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 APY29_RS18160 f00901fb00477efd96e06d7638f8d135 211 Gene3D G3DSA:2.40.240.10 4 97 1.0E-29 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 APY29_RS18160 f00901fb00477efd96e06d7638f8d135 211 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 5 97 22.969 T 28-03-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 APY29_RS18160 f00901fb00477efd96e06d7638f8d135 211 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 103 189 5.6E-24 T 28-03-2018 IPR020057 Ribosomal protein L25, beta domain APY29_RS18160 f00901fb00477efd96e06d7638f8d135 211 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 173 1.5E-38 T 28-03-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 APY29_RS18160 f00901fb00477efd96e06d7638f8d135 211 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 188 29.732 T 28-03-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 APY29_RS18160 f00901fb00477efd96e06d7638f8d135 211 SUPERFAMILY SSF50715 4 197 3.49E-55 T 28-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 APY29_RS18160 f00901fb00477efd96e06d7638f8d135 211 Gene3D G3DSA:2.170.120.20 101 197 4.5E-25 T 28-03-2018 IPR020057 Ribosomal protein L25, beta domain APY29_RS01295 4110fc62c6262535a33aa24e28e6c415 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.613 T 28-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS01295 4110fc62c6262535a33aa24e28e6c415 78 SUPERFAMILY SSF143800 2 77 4.32E-31 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS01295 4110fc62c6262535a33aa24e28e6c415 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 2.1E-26 T 28-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS01295 4110fc62c6262535a33aa24e28e6c415 78 Pfam PF00830 Ribosomal L28 family 3 62 3.7E-27 T 28-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS01295 4110fc62c6262535a33aa24e28e6c415 78 Gene3D G3DSA:2.30.170.40 2 75 7.7E-32 T 28-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS14150 9d8f94f725a7df58b76221f64c0b170c 203 Pfam PF06055 Exopolysaccharide synthesis, ExoD 10 186 1.9E-47 T 28-03-2018 IPR010331 Exopolysaccharide synthesis, ExoD APY29_RS14150 9d8f94f725a7df58b76221f64c0b170c 203 PIRSF PIRSF033239 1 198 2.7E-43 T 28-03-2018 IPR010331 Exopolysaccharide synthesis, ExoD APY29_RS16485 5ea3210dcb2da7cc7d7e3b789d1e48d9 774 SUPERFAMILY SSF48452 394 438 4.88E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS16485 5ea3210dcb2da7cc7d7e3b789d1e48d9 774 SUPERFAMILY SSF48452 470 537 4.88E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS16485 5ea3210dcb2da7cc7d7e3b789d1e48d9 774 Gene3D G3DSA:1.25.40.10 470 616 3.1E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS16485 5ea3210dcb2da7cc7d7e3b789d1e48d9 774 Gene3D G3DSA:1.25.40.10 15 180 2.6E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS16485 5ea3210dcb2da7cc7d7e3b789d1e48d9 774 Gene3D G3DSA:1.25.40.10 190 466 0.16 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS21225 45c7f61626e543c9bdb33c15f9b3d77a 319 SUPERFAMILY SSF53686 9 315 2.1E-79 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APY29_RS21225 45c7f61626e543c9bdb33c15f9b3d77a 319 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 47 60 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 APY29_RS21225 45c7f61626e543c9bdb33c15f9b3d77a 319 Gene3D G3DSA:3.40.50.1100 162 317 1.1E-33 T 28-03-2018 APY29_RS21225 45c7f61626e543c9bdb33c15f9b3d77a 319 Gene3D G3DSA:3.40.50.1100 20 161 6.8E-33 T 28-03-2018 APY29_RS21225 45c7f61626e543c9bdb33c15f9b3d77a 319 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 306 3.6E-69 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APY29_RS01830 7f03e4a3ce2bbf58321c5f5b5f98ee0d 331 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS01830 7f03e4a3ce2bbf58321c5f5b5f98ee0d 331 Gene3D G3DSA:3.40.50.300 7 263 1.1E-60 T 28-03-2018 APY29_RS01830 7f03e4a3ce2bbf58321c5f5b5f98ee0d 331 Pfam PF00005 ABC transporter 27 171 2.6E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS01830 7f03e4a3ce2bbf58321c5f5b5f98ee0d 331 SUPERFAMILY SSF52540 6 238 1.13E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS01830 7f03e4a3ce2bbf58321c5f5b5f98ee0d 331 SMART SM00382 36 218 5.0E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS11455 22d2c41d073cb0d673d5b0469357b5dd 308 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 13 275 7.2E-110 T 28-03-2018 IPR021844 Integrating conjugative element protein, PFL4704 APY29_RS11455 22d2c41d073cb0d673d5b0469357b5dd 308 Pfam PF11920 Protein of unknown function (DUF3438) 9 284 1.1E-123 T 28-03-2018 IPR021844 Integrating conjugative element protein, PFL4704 APY29_RS05955 e182728affe0300520c2e6b92dc9f19b 123 Gene3D G3DSA:3.40.960.10 17 114 1.3E-21 T 28-03-2018 APY29_RS05955 e182728affe0300520c2e6b92dc9f19b 123 Pfam PF04480 Protein of unknown function (DUF559) 8 110 1.4E-38 T 28-03-2018 IPR007569 Domain of unknown function DUF559 APY29_RS05955 e182728affe0300520c2e6b92dc9f19b 123 SUPERFAMILY SSF52980 9 112 8.58E-19 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 APY29_RS20490 c77542deec671b190371039cb08c708f 90 Gene3D G3DSA:1.10.10.60 4 90 1.1E-20 T 28-03-2018 APY29_RS20490 c77542deec671b190371039cb08c708f 90 PIRSF PIRSF002097 2 90 1.1E-34 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 APY29_RS20490 c77542deec671b190371039cb08c708f 90 Pfam PF02954 Bacterial regulatory protein, Fis family 47 87 4.4E-14 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS20490 c77542deec671b190371039cb08c708f 90 PRINTS PR01591 DNA-binding protein FIS signature 18 34 1.0E-8 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 APY29_RS20490 c77542deec671b190371039cb08c708f 90 PRINTS PR01591 DNA-binding protein FIS signature 34 49 1.0E-8 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 APY29_RS20490 c77542deec671b190371039cb08c708f 90 PRINTS PR01591 DNA-binding protein FIS signature 49 61 1.0E-8 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 APY29_RS20490 c77542deec671b190371039cb08c708f 90 SUPERFAMILY SSF46689 10 89 3.81E-23 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS20490 c77542deec671b190371039cb08c708f 90 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 53 70 3.7E-12 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS20490 c77542deec671b190371039cb08c708f 90 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 70 90 3.7E-12 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APY29_RS04285 81801dcea5dc02c1d51457ab69771785 200 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 14 190 5.3E-37 T 28-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like APY29_RS04285 81801dcea5dc02c1d51457ab69771785 200 SUPERFAMILY SSF51197 5 193 1.92E-63 T 28-03-2018 APY29_RS04285 81801dcea5dc02c1d51457ab69771785 200 Gene3D G3DSA:2.60.120.590 7 193 2.0E-52 T 28-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like APY29_RS10095 207294f4d4b0c67db8dcae1abfb929d4 292 Hamap MF_00188 Protease HtpX [htpX]. 2 287 25.797 T 28-03-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 APY29_RS10095 207294f4d4b0c67db8dcae1abfb929d4 292 Gene3D G3DSA:3.30.2010.10 65 158 3.7E-22 T 28-03-2018 APY29_RS10095 207294f4d4b0c67db8dcae1abfb929d4 292 Pfam PF01435 Peptidase family M48 76 286 2.4E-41 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 APY29_RS16525 bd1c6c23fe104a763b2685eb721a549f 208 Gene3D G3DSA:1.20.120.80 23 208 1.7E-53 T 28-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS16525 bd1c6c23fe104a763b2685eb721a549f 208 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 29 208 3.3E-82 T 28-03-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 APY29_RS16525 bd1c6c23fe104a763b2685eb721a549f 208 Pfam PF00510 Cytochrome c oxidase subunit III 30 206 2.1E-13 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS16525 bd1c6c23fe104a763b2685eb721a549f 208 SUPERFAMILY SSF81452 15 206 7.33E-57 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS13120 9fe064f0751595fdf83f2846a4587bae 253 Pfam PF13557 Putative MetA-pathway of phenol degradation 27 253 2.2E-18 T 28-03-2018 IPR025737 MetA-pathway of phenol degradation, putative APY29_RS13120 9fe064f0751595fdf83f2846a4587bae 253 Gene3D G3DSA:2.40.160.20 38 253 7.1E-5 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APY29_RS09225 3ad6ad3337ab394831b9fbfe3f1030a1 319 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 213 4.2E-26 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 APY29_RS09225 3ad6ad3337ab394831b9fbfe3f1030a1 319 SUPERFAMILY SSF51735 284 316 9.17E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS09225 3ad6ad3337ab394831b9fbfe3f1030a1 319 SUPERFAMILY SSF51735 3 255 9.17E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS09225 3ad6ad3337ab394831b9fbfe3f1030a1 319 Gene3D G3DSA:3.40.50.720 2 316 4.9E-36 T 28-03-2018 APY29_RS03470 27491f5033648d4fdde12ed003bcbe32 168 Gene3D G3DSA:1.20.1260.10 1 165 1.1E-29 T 28-03-2018 IPR012347 Ferritin-related APY29_RS03470 27491f5033648d4fdde12ed003bcbe32 168 SUPERFAMILY SSF47240 1 154 8.62E-57 T 28-03-2018 IPR009078 Ferritin-like superfamily APY29_RS03470 27491f5033648d4fdde12ed003bcbe32 168 Pfam PF05974 Domain of unknown function (DUF892) 5 161 3.1E-61 T 28-03-2018 IPR010287 Domain of unknown function DUF892 APY29_RS20735 8a7143404dfbeaa3915186d2433d27e5 165 SUPERFAMILY SSF55729 7 120 7.89E-28 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS20735 8a7143404dfbeaa3915186d2433d27e5 165 Gene3D G3DSA:3.40.630.30 2 160 4.9E-26 T 28-03-2018 APY29_RS20735 8a7143404dfbeaa3915186d2433d27e5 165 Pfam PF00583 Acetyltransferase (GNAT) family 37 120 8.1E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 APY29_RS08285 d4e4cb42f2538487275865d39f02a756 289 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 73 130 9.3E-9 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APY29_RS08285 d4e4cb42f2538487275865d39f02a756 289 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 74 282 1.8E-43 T 28-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 APY29_RS08285 d4e4cb42f2538487275865d39f02a756 289 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 69 283 27.253 T 28-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 APY29_RS08285 d4e4cb42f2538487275865d39f02a756 289 Gene3D G3DSA:3.40.50.620 65 284 3.6E-48 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS08285 d4e4cb42f2538487275865d39f02a756 289 SUPERFAMILY SSF52374 72 285 4.29E-46 T 28-03-2018 APY29_RS08285 d4e4cb42f2538487275865d39f02a756 289 Pfam PF01467 Cytidylyltransferase-like 73 255 5.5E-25 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APY29_RS12690 431d299d49bc8d519f908310b090280f 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 121 1.1E-35 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G APY29_RS12690 431d299d49bc8d519f908310b090280f 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 246 4.2E-22 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain APY29_RS12690 431d299d49bc8d519f908310b090280f 251 Pfam PF00460 Flagella basal body rod protein 5 35 1.4E-8 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 APY29_RS12690 431d299d49bc8d519f908310b090280f 251 SUPERFAMILY SSF117143 77 208 3.53E-14 T 28-03-2018 APY29_RS12690 431d299d49bc8d519f908310b090280f 251 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 227 1.1E-55 T 28-03-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 APY29_RS00725 8bedae88f6776b8264c99d639f9bf3ea 399 Pfam PF07584 Aerotolerance regulator N-terminal 6 77 5.0E-9 T 28-03-2018 IPR024163 Aerotolerance regulator, N-terminal APY29_RS00725 8bedae88f6776b8264c99d639f9bf3ea 399 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 4 82 1.6E-22 T 28-03-2018 IPR011933 Double transmembrane domain APY29_RS17965 0dacc20df937a2d529e099010a9daee5 63 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 9 63 5.2E-19 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS17965 0dacc20df937a2d529e099010a9daee5 63 SUPERFAMILY SSF55129 7 63 7.06E-17 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APY29_RS17965 0dacc20df937a2d529e099010a9daee5 63 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 6 63 18.681 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS17965 0dacc20df937a2d529e099010a9daee5 63 PIRSF PIRSF002211 1 63 7.9E-24 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS17965 0dacc20df937a2d529e099010a9daee5 63 Gene3D G3DSA:3.30.1390.20 9 63 8.3E-18 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APY29_RS17965 0dacc20df937a2d529e099010a9daee5 63 Pfam PF00327 Ribosomal protein L30p/L7e 10 59 1.5E-12 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APY29_RS08920 26d3548a975e95841385676e21c97dc2 386 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS08920 26d3548a975e95841385676e21c97dc2 386 Pfam PF16074 Type IV Pilus-assembly protein W 243 381 4.8E-23 T 28-03-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 APY29_RS08920 26d3548a975e95841385676e21c97dc2 386 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 4.0E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS08920 26d3548a975e95841385676e21c97dc2 386 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 6.0E-4 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS15485 feed4066795c28e833ecfc0f5531e704 166 SMART SM00347 45 147 2.9E-18 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS15485 feed4066795c28e833ecfc0f5531e704 166 SUPERFAMILY SSF46785 18 161 5.55E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS15485 feed4066795c28e833ecfc0f5531e704 166 Pfam PF01047 MarR family 52 111 2.2E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS15485 feed4066795c28e833ecfc0f5531e704 166 Gene3D G3DSA:1.10.10.10 5 164 7.3E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS15485 feed4066795c28e833ecfc0f5531e704 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 107 123 1.5E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS15485 feed4066795c28e833ecfc0f5531e704 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 137 157 1.5E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS15485 feed4066795c28e833ecfc0f5531e704 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 87 1.5E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS15485 feed4066795c28e833ecfc0f5531e704 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 103 1.5E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS04530 4a32675f433167163222bff517d01584 191 Pfam PF04973 Nicotinamide mononucleotide transporter 2 180 1.4E-48 T 28-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 APY29_RS04530 4a32675f433167163222bff517d01584 191 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 2 184 4.8E-23 T 28-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 APY29_RS17085 f9edb91ee50fc48f0efd75d832674b49 212 SUPERFAMILY SSF109604 5 175 3.52E-33 T 28-03-2018 APY29_RS17085 f9edb91ee50fc48f0efd75d832674b49 212 SMART SM00471 27 148 0.0013 T 28-03-2018 IPR003607 HD/PDEase domain APY29_RS17085 f9edb91ee50fc48f0efd75d832674b49 212 Pfam PF13328 HD domain 11 166 2.4E-30 T 28-03-2018 IPR003607 HD/PDEase domain APY29_RS22695 61dec5c8227da634d7a67488a605f257 148 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 36 135 1.3E-13 T 28-03-2018 IPR019223 Domain of unknown function DUF2147 APY29_RS20960 a009509cf41e1c60b27b7d5fd4dc432c 720 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 15 701 0.0 T 28-03-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 APY29_RS20960 a009509cf41e1c60b27b7d5fd4dc432c 720 SMART SM00642 190 578 4.7E-6 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS20960 a009509cf41e1c60b27b7d5fd4dc432c 720 SUPERFAMILY SSF51011 598 701 1.29E-19 T 28-03-2018 APY29_RS20960 a009509cf41e1c60b27b7d5fd4dc432c 720 Pfam PF00128 Alpha amylase, catalytic domain 200 307 1.2E-7 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS20960 a009509cf41e1c60b27b7d5fd4dc432c 720 SUPERFAMILY SSF51445 508 585 9.72E-131 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS20960 a009509cf41e1c60b27b7d5fd4dc432c 720 SUPERFAMILY SSF51445 147 479 9.72E-131 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS20960 a009509cf41e1c60b27b7d5fd4dc432c 720 Gene3D G3DSA:2.60.40.1180 591 705 5.3E-24 T 28-03-2018 APY29_RS20960 a009509cf41e1c60b27b7d5fd4dc432c 720 Gene3D G3DSA:3.20.20.80 150 590 6.0E-112 T 28-03-2018 APY29_RS20960 a009509cf41e1c60b27b7d5fd4dc432c 720 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 19 106 5.8E-21 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 APY29_RS20960 a009509cf41e1c60b27b7d5fd4dc432c 720 SUPERFAMILY SSF81296 15 160 8.4E-49 T 28-03-2018 IPR014756 Immunoglobulin E-set APY29_RS20960 a009509cf41e1c60b27b7d5fd4dc432c 720 Gene3D G3DSA:2.60.40.10 14 149 5.2E-47 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS15005 637e14aa0d5ba86a8d28f9b82eb960fb 352 Pfam PF00294 pfkB family carbohydrate kinase 30 339 6.8E-66 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB APY29_RS15005 637e14aa0d5ba86a8d28f9b82eb960fb 352 SUPERFAMILY SSF53613 29 348 1.09E-77 T 28-03-2018 IPR029056 Ribokinase-like APY29_RS15005 637e14aa0d5ba86a8d28f9b82eb960fb 352 Gene3D G3DSA:3.40.1190.20 31 352 1.1E-72 T 28-03-2018 IPR029056 Ribokinase-like APY29_RS15005 637e14aa0d5ba86a8d28f9b82eb960fb 352 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 281 294 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APY29_RS15005 637e14aa0d5ba86a8d28f9b82eb960fb 352 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 61 85 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APY29_RS20865 69d2f1eb54f98c9b0b3a1afc4ad55b28 506 Gene3D G3DSA:1.20.1250.20 287 500 1.0E-13 T 28-03-2018 APY29_RS20865 69d2f1eb54f98c9b0b3a1afc4ad55b28 506 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 164 176 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 APY29_RS20865 69d2f1eb54f98c9b0b3a1afc4ad55b28 506 Gene3D G3DSA:1.20.1250.20 19 222 5.0E-20 T 28-03-2018 APY29_RS20865 69d2f1eb54f98c9b0b3a1afc4ad55b28 506 Pfam PF00854 POT family 103 462 1.3E-60 T 28-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 APY29_RS20865 69d2f1eb54f98c9b0b3a1afc4ad55b28 506 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 25 502 1.2E-105 T 28-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 APY29_RS20865 69d2f1eb54f98c9b0b3a1afc4ad55b28 506 SUPERFAMILY SSF103473 285 501 6.41E-29 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS20865 69d2f1eb54f98c9b0b3a1afc4ad55b28 506 SUPERFAMILY SSF103473 10 224 6.41E-29 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS06005 5a024f5d943a6c7403777c49204ea3c7 825 SMART SM00564 353 396 1.9 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS06005 5a024f5d943a6c7403777c49204ea3c7 825 SMART SM00564 239 270 0.0076 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS06005 5a024f5d943a6c7403777c49204ea3c7 825 SMART SM00564 424 474 2.2 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS06005 5a024f5d943a6c7403777c49204ea3c7 825 SMART SM00564 739 772 5.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS06005 5a024f5d943a6c7403777c49204ea3c7 825 SMART SM00564 496 529 730.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APY29_RS06005 5a024f5d943a6c7403777c49204ea3c7 825 Gene3D G3DSA:2.140.10.10 175 821 1.8E-92 T 28-03-2018 APY29_RS06005 5a024f5d943a6c7403777c49204ea3c7 825 SUPERFAMILY SSF50998 581 817 9.68E-144 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APY29_RS06005 5a024f5d943a6c7403777c49204ea3c7 825 SUPERFAMILY SSF50998 180 538 9.68E-144 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APY29_RS06005 5a024f5d943a6c7403777c49204ea3c7 825 Pfam PF01011 PQQ enzyme repeat 245 279 3.0E-5 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat APY29_RS06005 5a024f5d943a6c7403777c49204ea3c7 825 Pfam PF13360 PQQ-like domain 378 525 1.6E-6 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat APY29_RS06005 5a024f5d943a6c7403777c49204ea3c7 825 Pfam PF13360 PQQ-like domain 694 798 8.7E-6 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat APY29_RS06005 5a024f5d943a6c7403777c49204ea3c7 825 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 17 816 0.0 T 28-03-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 APY29_RS12640 073162cfe27a90171b9e90fb8697b461 408 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 301 404 3.5E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS12640 073162cfe27a90171b9e90fb8697b461 408 SMART SM00387 297 406 2.1E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS12640 073162cfe27a90171b9e90fb8697b461 408 Gene3D G3DSA:1.10.287.130 142 251 3.9E-11 T 28-03-2018 APY29_RS12640 073162cfe27a90171b9e90fb8697b461 408 SUPERFAMILY SSF55874 252 404 9.04E-42 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS12640 073162cfe27a90171b9e90fb8697b461 408 SUPERFAMILY SSF47384 149 189 8.24E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS12640 073162cfe27a90171b9e90fb8697b461 408 Pfam PF00512 His Kinase A (phospho-acceptor) domain 155 253 3.5E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS12640 073162cfe27a90171b9e90fb8697b461 408 Gene3D G3DSA:3.30.450.20 7 136 4.4E-6 T 28-03-2018 APY29_RS12640 073162cfe27a90171b9e90fb8697b461 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 363 4.4E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS12640 073162cfe27a90171b9e90fb8697b461 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 384 4.4E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS12640 073162cfe27a90171b9e90fb8697b461 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 403 4.4E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS12640 073162cfe27a90171b9e90fb8697b461 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 349 4.4E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS12640 073162cfe27a90171b9e90fb8697b461 408 Gene3D G3DSA:3.30.565.10 255 406 5.0E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS17500 c9fa04ed1cdced946ac50ee90231c0e4 81 SUPERFAMILY SSF54285 5 81 3.55E-17 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APY29_RS17500 c9fa04ed1cdced946ac50ee90231c0e4 81 Gene3D G3DSA:3.10.20.30 5 81 3.6E-19 T 28-03-2018 IPR012675 Beta-grasp domain APY29_RS17500 c9fa04ed1cdced946ac50ee90231c0e4 81 Pfam PF02597 ThiS family 7 81 4.1E-17 T 28-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 APY29_RS20905 d61fee4d315ad9f0a6fceee967cc4d79 111 Gene3D G3DSA:3.40.630.30 1 86 6.6E-4 T 28-03-2018 APY29_RS19205 791ff5fb72ceebccb87e5e0119cc3e5a 159 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 19 150 23.37 T 28-03-2018 IPR011605 NusB antitermination factor GO:0006353 APY29_RS19205 791ff5fb72ceebccb87e5e0119cc3e5a 159 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 21 147 1.0E-42 T 28-03-2018 IPR011605 NusB antitermination factor GO:0006353 APY29_RS19205 791ff5fb72ceebccb87e5e0119cc3e5a 159 SUPERFAMILY SSF48013 19 150 9.03E-41 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APY29_RS19205 791ff5fb72ceebccb87e5e0119cc3e5a 159 Pfam PF01029 NusB family 23 146 1.3E-33 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APY29_RS19205 791ff5fb72ceebccb87e5e0119cc3e5a 159 Gene3D G3DSA:1.10.940.10 18 153 7.7E-41 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APY29_RS15515 51692e5fa167341a0bd85e419d396bff 589 SUPERFAMILY SSF53187 38 322 6.95E-52 T 28-03-2018 APY29_RS15515 51692e5fa167341a0bd85e419d396bff 589 Pfam PF00246 Zinc carboxypeptidase 45 216 6.8E-39 T 28-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 APY29_RS15515 51692e5fa167341a0bd85e419d396bff 589 SMART SM00631 40 273 1.3E-4 T 28-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 APY29_RS15515 51692e5fa167341a0bd85e419d396bff 589 Gene3D G3DSA:3.40.630.10 23 324 8.2E-39 T 28-03-2018 APY29_RS09520 b79fa256303334950d747ef72512e651 210 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 42.187 T 28-03-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 APY29_RS09520 b79fa256303334950d747ef72512e651 210 SUPERFAMILY SSF53271 4 206 4.85E-63 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like APY29_RS09520 b79fa256303334950d747ef72512e651 210 Gene3D G3DSA:3.40.50.2020 1 206 2.0E-58 T 28-03-2018 APY29_RS09520 b79fa256303334950d747ef72512e651 210 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 207 1.9E-80 T 28-03-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 APY29_RS09520 b79fa256303334950d747ef72512e651 210 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 2.3E-63 T 28-03-2018 APY29_RS22650 c4aad25681c9eaa5d7500fc1385240d9 336 Gene3D G3DSA:2.120.10.80 80 210 4.7E-25 T 28-03-2018 IPR015915 Kelch-type beta propeller GO:0005515 APY29_RS22650 c4aad25681c9eaa5d7500fc1385240d9 336 Gene3D G3DSA:2.120.10.80 32 79 3.9E-6 T 28-03-2018 IPR015915 Kelch-type beta propeller GO:0005515 APY29_RS22650 c4aad25681c9eaa5d7500fc1385240d9 336 Pfam PF01344 Kelch motif 147 193 1.0E-6 T 28-03-2018 IPR006652 Kelch repeat type 1 GO:0005515 APY29_RS22650 c4aad25681c9eaa5d7500fc1385240d9 336 Pfam PF13964 Kelch motif 98 146 1.2E-6 T 28-03-2018 APY29_RS22650 c4aad25681c9eaa5d7500fc1385240d9 336 Pfam PF13964 Kelch motif 52 92 7.4E-7 T 28-03-2018 APY29_RS22650 c4aad25681c9eaa5d7500fc1385240d9 336 SUPERFAMILY SSF117281 36 201 2.48E-31 T 28-03-2018 APY29_RS22650 c4aad25681c9eaa5d7500fc1385240d9 336 SMART SM00612 159 208 18.0 T 28-03-2018 IPR006652 Kelch repeat type 1 GO:0005515 APY29_RS22650 c4aad25681c9eaa5d7500fc1385240d9 336 SMART SM00612 63 105 10.0 T 28-03-2018 IPR006652 Kelch repeat type 1 GO:0005515 APY29_RS22650 c4aad25681c9eaa5d7500fc1385240d9 336 SMART SM00612 106 156 8.8E-4 T 28-03-2018 IPR006652 Kelch repeat type 1 GO:0005515 APY29_RS07765 9c0078166f0951059c8532cfd1e53a8d 698 Pfam PF01431 Peptidase family M13 492 695 3.0E-72 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS07765 9c0078166f0951059c8532cfd1e53a8d 698 Pfam PF05649 Peptidase family M13 67 440 6.7E-97 T 28-03-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 APY29_RS07765 9c0078166f0951059c8532cfd1e53a8d 698 SUPERFAMILY SSF55486 54 698 5.13E-209 T 28-03-2018 APY29_RS07765 9c0078166f0951059c8532cfd1e53a8d 698 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 502 514 3.5E-22 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS07765 9c0078166f0951059c8532cfd1e53a8d 698 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 484 496 3.5E-22 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS07765 9c0078166f0951059c8532cfd1e53a8d 698 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 523 539 3.5E-22 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS07765 9c0078166f0951059c8532cfd1e53a8d 698 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 594 605 3.5E-22 T 28-03-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 APY29_RS07765 9c0078166f0951059c8532cfd1e53a8d 698 Gene3D G3DSA:3.40.390.10 61 307 7.9E-10 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APY29_RS07765 9c0078166f0951059c8532cfd1e53a8d 698 Gene3D G3DSA:3.40.390.10 364 698 3.6E-114 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APY29_RS04000 58aab539fb318da39ea02a21535caa39 367 SUPERFAMILY SSF53686 5 337 5.37E-66 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APY29_RS04000 58aab539fb318da39ea02a21535caa39 367 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 34 320 5.8E-46 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APY29_RS04000 58aab539fb318da39ea02a21535caa39 367 Gene3D G3DSA:3.40.50.1100 30 142 3.3E-23 T 28-03-2018 APY29_RS04000 58aab539fb318da39ea02a21535caa39 367 Gene3D G3DSA:3.40.50.1100 143 334 1.3E-34 T 28-03-2018 APY29_RS20715 197c679133b5188f0e4258c93cc46287 192 SUPERFAMILY SSF52317 1 191 2.19E-54 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS20715 197c679133b5188f0e4258c93cc46287 192 Gene3D G3DSA:3.40.50.880 1 192 1.4E-58 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS20715 197c679133b5188f0e4258c93cc46287 192 PRINTS PR00097 Anthranilate synthase component II signature 2 16 4.0E-36 T 28-03-2018 APY29_RS20715 197c679133b5188f0e4258c93cc46287 192 PRINTS PR00097 Anthranilate synthase component II signature 169 182 4.0E-36 T 28-03-2018 APY29_RS20715 197c679133b5188f0e4258c93cc46287 192 PRINTS PR00097 Anthranilate synthase component II signature 47 56 4.0E-36 T 28-03-2018 APY29_RS20715 197c679133b5188f0e4258c93cc46287 192 PRINTS PR00097 Anthranilate synthase component II signature 119 131 4.0E-36 T 28-03-2018 APY29_RS20715 197c679133b5188f0e4258c93cc46287 192 PRINTS PR00097 Anthranilate synthase component II signature 99 107 4.0E-36 T 28-03-2018 APY29_RS20715 197c679133b5188f0e4258c93cc46287 192 PRINTS PR00097 Anthranilate synthase component II signature 74 85 4.0E-36 T 28-03-2018 APY29_RS20715 197c679133b5188f0e4258c93cc46287 192 Pfam PF00117 Glutamine amidotransferase class-I 4 190 2.1E-54 T 28-03-2018 IPR017926 Glutamine amidotransferase APY29_RS20715 197c679133b5188f0e4258c93cc46287 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.4E-14 T 28-03-2018 APY29_RS20715 197c679133b5188f0e4258c93cc46287 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 7.4E-14 T 28-03-2018 APY29_RS20715 197c679133b5188f0e4258c93cc46287 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.4E-14 T 28-03-2018 APY29_RS20715 197c679133b5188f0e4258c93cc46287 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 3.1E-79 T 28-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 APY29_RS20715 197c679133b5188f0e4258c93cc46287 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 4.5E-5 T 28-03-2018 APY29_RS20715 197c679133b5188f0e4258c93cc46287 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 4.5E-5 T 28-03-2018 APY29_RS08480 3733dac7e975459d0c98f642d56de84f 996 Pfam PF00593 TonB dependent receptor 443 995 2.5E-48 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS08480 3733dac7e975459d0c98f642d56de84f 996 Gene3D G3DSA:2.40.170.20 180 996 9.4E-73 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS08480 3733dac7e975459d0c98f642d56de84f 996 Gene3D G3DSA:2.170.130.10 36 179 1.1E-31 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS08480 3733dac7e975459d0c98f642d56de84f 996 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 173 7.7E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS08480 3733dac7e975459d0c98f642d56de84f 996 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 979 996 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site APY29_RS08480 3733dac7e975459d0c98f642d56de84f 996 SUPERFAMILY SSF56935 405 457 6.59E-100 T 28-03-2018 APY29_RS08480 3733dac7e975459d0c98f642d56de84f 996 SUPERFAMILY SSF56935 526 670 6.59E-100 T 28-03-2018 APY29_RS08480 3733dac7e975459d0c98f642d56de84f 996 SUPERFAMILY SSF56935 47 233 6.59E-100 T 28-03-2018 APY29_RS08480 3733dac7e975459d0c98f642d56de84f 996 SUPERFAMILY SSF56935 727 772 6.59E-100 T 28-03-2018 APY29_RS08480 3733dac7e975459d0c98f642d56de84f 996 SUPERFAMILY SSF56935 819 996 6.59E-100 T 28-03-2018 APY29_RS08480 3733dac7e975459d0c98f642d56de84f 996 SUPERFAMILY SSF56935 336 376 6.59E-100 T 28-03-2018 APY29_RS06350 ef9a8f44213038e0cadad52b2f03265d 152 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 16 138 1.0E-50 T 28-03-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 APY29_RS06350 ef9a8f44213038e0cadad52b2f03265d 152 Gene3D G3DSA:3.10.129.10 9 151 4.3E-33 T 28-03-2018 APY29_RS06350 ef9a8f44213038e0cadad52b2f03265d 152 Pfam PF03061 Thioesterase superfamily 30 114 2.8E-18 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 APY29_RS06350 ef9a8f44213038e0cadad52b2f03265d 152 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 19 122 1.7E-31 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 APY29_RS06350 ef9a8f44213038e0cadad52b2f03265d 152 SUPERFAMILY SSF54637 14 144 1.41E-38 T 28-03-2018 IPR029069 HotDog domain APY29_RS06350 ef9a8f44213038e0cadad52b2f03265d 152 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 21 38 - T 28-03-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 APY29_RS06350 ef9a8f44213038e0cadad52b2f03265d 152 PIRSF PIRSF003230 8 149 1.7E-40 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 APY29_RS14245 2d401631d1b6d6040f92849f31ec8bea 303 Pfam PF13480 Acetyltransferase (GNAT) domain 151 272 3.7E-12 T 28-03-2018 APY29_RS14245 2d401631d1b6d6040f92849f31ec8bea 303 SUPERFAMILY SSF55729 145 295 1.18E-25 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS14245 2d401631d1b6d6040f92849f31ec8bea 303 Gene3D G3DSA:3.40.630.30 157 293 8.7E-23 T 28-03-2018 APY29_RS14245 2d401631d1b6d6040f92849f31ec8bea 303 Gene3D G3DSA:3.40.630.30 1 156 2.0E-6 T 28-03-2018 APY29_RS05400 2a728fc2896772dd965e062a158c9968 434 PRINTS PR00173 Glutamate-aspartate symporter signature 324 350 6.4E-33 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS05400 2a728fc2896772dd965e062a158c9968 434 PRINTS PR00173 Glutamate-aspartate symporter signature 386 406 6.4E-33 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS05400 2a728fc2896772dd965e062a158c9968 434 PRINTS PR00173 Glutamate-aspartate symporter signature 99 124 6.4E-33 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS05400 2a728fc2896772dd965e062a158c9968 434 PRINTS PR00173 Glutamate-aspartate symporter signature 69 89 6.4E-33 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS05400 2a728fc2896772dd965e062a158c9968 434 PRINTS PR00173 Glutamate-aspartate symporter signature 176 198 6.4E-33 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS05400 2a728fc2896772dd965e062a158c9968 434 PRINTS PR00173 Glutamate-aspartate symporter signature 359 378 6.4E-33 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS05400 2a728fc2896772dd965e062a158c9968 434 SUPERFAMILY SSF118215 22 431 6.02E-99 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS05400 2a728fc2896772dd965e062a158c9968 434 Pfam PF00375 Sodium:dicarboxylate symporter family 22 431 4.5E-109 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS05400 2a728fc2896772dd965e062a158c9968 434 Gene3D G3DSA:1.10.3860.10 18 434 2.1E-106 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS01260 8f99adb0e60e99f22d5c295be1589e69 212 PIRSF PIRSF003078 1 212 2.6E-71 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APY29_RS01260 8f99adb0e60e99f22d5c295be1589e69 212 SUPERFAMILY SSF53335 22 210 1.34E-33 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS01260 8f99adb0e60e99f22d5c295be1589e69 212 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 20 208 25.762 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APY29_RS01260 8f99adb0e60e99f22d5c295be1589e69 212 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 32 211 1.9E-52 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APY29_RS01260 8f99adb0e60e99f22d5c295be1589e69 212 Gene3D G3DSA:3.40.50.150 10 212 4.8E-29 T 28-03-2018 APY29_RS01260 8f99adb0e60e99f22d5c295be1589e69 212 Pfam PF02527 rRNA small subunit methyltransferase G 31 207 8.8E-51 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APY29_RS13615 c7b301685c9b8c7310b70fa88c11dc34 257 Pfam PF08241 Methyltransferase domain 48 140 8.5E-15 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APY29_RS13615 c7b301685c9b8c7310b70fa88c11dc34 257 Gene3D G3DSA:3.40.50.150 7 257 2.2E-26 T 28-03-2018 APY29_RS13615 c7b301685c9b8c7310b70fa88c11dc34 257 SUPERFAMILY SSF53335 15 189 2.34E-28 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS23285 8f2b2f1324180220412dfb745a6cbaf6 622 SUPERFAMILY SSF51161 485 550 1.68E-5 T 28-03-2018 IPR011004 Trimeric LpxA-like APY29_RS23285 8f2b2f1324180220412dfb745a6cbaf6 622 Gene3D G3DSA:2.160.10.10 479 577 4.5E-5 T 28-03-2018 APY29_RS03415 4d5a5605d3548ade439caae51972e950 469 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 434 3.6E-150 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 APY29_RS03415 4d5a5605d3548ade439caae51972e950 469 PIRSF PIRSF006446 1 456 6.9E-184 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 APY29_RS21655 491e936c0f2448d4dbe85fa3b5a591e2 486 TIGRFAM TIGR02715 amido_AtzE: amidohydrolase, AtzE family 44 478 3.4E-194 T 28-03-2018 IPR014087 Amidohydrolase, AtzE type KEGG: 00791+3.5.1.84|MetaCyc: PWY-5169 APY29_RS21655 491e936c0f2448d4dbe85fa3b5a591e2 486 Pfam PF01425 Amidase 64 464 3.7E-82 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APY29_RS21655 491e936c0f2448d4dbe85fa3b5a591e2 486 Gene3D G3DSA:3.90.1300.10 44 474 3.0E-117 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APY29_RS21655 491e936c0f2448d4dbe85fa3b5a591e2 486 SUPERFAMILY SSF75304 46 473 1.07E-111 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APY29_RS07925 c7bf6b1e45d15eecdc1d1c854c838924 224 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 151 205 1.5E-4 T 28-03-2018 APY29_RS07925 c7bf6b1e45d15eecdc1d1c854c838924 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 3.7E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS07925 c7bf6b1e45d15eecdc1d1c854c838924 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 3.7E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS07925 c7bf6b1e45d15eecdc1d1c854c838924 224 Gene3D G3DSA:1.10.357.10 67 220 2.5E-13 T 28-03-2018 APY29_RS07925 c7bf6b1e45d15eecdc1d1c854c838924 224 SUPERFAMILY SSF46689 7 91 3.08E-18 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS07925 c7bf6b1e45d15eecdc1d1c854c838924 224 SUPERFAMILY SSF48498 85 206 2.37E-5 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APY29_RS07925 c7bf6b1e45d15eecdc1d1c854c838924 224 Gene3D G3DSA:1.10.10.60 4 66 3.2E-19 T 28-03-2018 APY29_RS07925 c7bf6b1e45d15eecdc1d1c854c838924 224 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 63 2.0E-18 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APY29_RS07925 c7bf6b1e45d15eecdc1d1c854c838924 224 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APY29_RS21060 d7f89f69838593148f6b9630dc17cf50 442 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 15 439 2.2E-169 T 28-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APY29_RS21060 d7f89f69838593148f6b9630dc17cf50 442 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 350 359 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APY29_RS21060 d7f89f69838593148f6b9630dc17cf50 442 SMART SM00382 162 344 3.3E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS21060 d7f89f69838593148f6b9630dc17cf50 442 SUPERFAMILY SSF52540 97 365 7.95E-96 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS21060 d7f89f69838593148f6b9630dc17cf50 442 Gene3D G3DSA:1.10.1140.10 365 441 3.1E-5 T 28-03-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APY29_RS21060 d7f89f69838593148f6b9630dc17cf50 442 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 93 2.3E-7 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APY29_RS21060 d7f89f69838593148f6b9630dc17cf50 442 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 359 1.1E-70 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APY29_RS21060 d7f89f69838593148f6b9630dc17cf50 442 Gene3D G3DSA:3.40.50.300 96 364 3.1E-83 T 28-03-2018 APY29_RS21060 d7f89f69838593148f6b9630dc17cf50 442 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 23 439 5.1E-192 T 28-03-2018 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APY29_RS04775 c4a844381c7891621aa98a9c6941cfd5 363 Gene3D G3DSA:3.40.50.300 110 269 7.5E-24 T 28-03-2018 APY29_RS04775 c4a844381c7891621aa98a9c6941cfd5 363 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 38 334 31.408 T 28-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 APY29_RS04775 c4a844381c7891621aa98a9c6941cfd5 363 Gene3D G3DSA:1.10.40.50 272 339 5.7E-19 T 28-03-2018 APY29_RS04775 c4a844381c7891621aa98a9c6941cfd5 363 Pfam PF03193 RsgA GTPase 96 269 5.8E-47 T 28-03-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 APY29_RS04775 c4a844381c7891621aa98a9c6941cfd5 363 SUPERFAMILY SSF52540 113 326 1.45E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS04775 c4a844381c7891621aa98a9c6941cfd5 363 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 85 326 1.4E-43 T 28-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 APY29_RS19290 dcc4662b7a912c4905d4a4b438e7a713 276 Gene3D G3DSA:3.40.50.1820 1 275 2.0E-43 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS19290 dcc4662b7a912c4905d4a4b438e7a713 276 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 4 274 6.5E-128 T 28-03-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 APY29_RS19290 dcc4662b7a912c4905d4a4b438e7a713 276 SUPERFAMILY SSF53474 1 274 1.37E-89 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS19290 dcc4662b7a912c4905d4a4b438e7a713 276 Pfam PF00756 Putative esterase 21 268 5.5E-67 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 APY29_RS21295 5d93faf760d68f81f5099331e0a5aaa4 262 SMART SM00882 8 217 4.6E-42 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 APY29_RS21295 5d93faf760d68f81f5099331e0a5aaa4 262 Pfam PF01144 Coenzyme A transferase 8 216 4.3E-51 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 APY29_RS21295 5d93faf760d68f81f5099331e0a5aaa4 262 SUPERFAMILY SSF100950 4 245 7.78E-73 T 28-03-2018 APY29_RS21295 5d93faf760d68f81f5099331e0a5aaa4 262 Gene3D G3DSA:3.40.1080.10 1 254 1.9E-55 T 28-03-2018 APY29_RS18560 1dd9c0e602ea4ca24a5c05c5684406f1 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 9 391 3.3E-132 T 28-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 APY29_RS18560 1dd9c0e602ea4ca24a5c05c5684406f1 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 8.0E-19 T 28-03-2018 APY29_RS18560 1dd9c0e602ea4ca24a5c05c5684406f1 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 8.0E-19 T 28-03-2018 APY29_RS18560 1dd9c0e602ea4ca24a5c05c5684406f1 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 8.0E-19 T 28-03-2018 APY29_RS18560 1dd9c0e602ea4ca24a5c05c5684406f1 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 8.0E-19 T 28-03-2018 APY29_RS18560 1dd9c0e602ea4ca24a5c05c5684406f1 393 Pfam PF01494 FAD binding domain 8 322 6.4E-28 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 APY29_RS18560 1dd9c0e602ea4ca24a5c05c5684406f1 393 SUPERFAMILY SSF51905 9 178 3.53E-55 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS18560 1dd9c0e602ea4ca24a5c05c5684406f1 393 SUPERFAMILY SSF51905 268 386 3.53E-55 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS18560 1dd9c0e602ea4ca24a5c05c5684406f1 393 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 28-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 APY29_RS18560 1dd9c0e602ea4ca24a5c05c5684406f1 393 Gene3D G3DSA:3.50.50.60 5 365 1.7E-45 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS17025 89ad8e4c6a9f06953e808b6e38fcb62e 200 SUPERFAMILY SSF52540 45 158 6.27E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS17025 89ad8e4c6a9f06953e808b6e38fcb62e 200 Gene3D G3DSA:3.40.50.300 44 159 1.4E-27 T 28-03-2018 APY29_RS17025 89ad8e4c6a9f06953e808b6e38fcb62e 200 PIRSF PIRSF037290 1 199 9.7E-81 T 28-03-2018 IPR017166 Uncharacterised conserved protein UCP037290 APY29_RS11185 33de9212e9a9adb8bbf0e3266df23231 499 Gene3D G3DSA:2.120.10.30 183 319 2.5E-13 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS11185 33de9212e9a9adb8bbf0e3266df23231 499 SUPERFAMILY SSF52833 33 157 1.66E-18 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS11185 33de9212e9a9adb8bbf0e3266df23231 499 SUPERFAMILY SSF101898 193 490 6.28E-29 T 28-03-2018 APY29_RS11185 33de9212e9a9adb8bbf0e3266df23231 499 Gene3D G3DSA:2.120.10.30 320 496 1.8E-11 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS11185 33de9212e9a9adb8bbf0e3266df23231 499 Gene3D G3DSA:3.40.30.10 31 172 1.1E-11 T 28-03-2018 APY29_RS11185 33de9212e9a9adb8bbf0e3266df23231 499 Pfam PF01436 NHL repeat 246 270 7.1E-5 T 28-03-2018 IPR001258 NHL repeat GO:0005515 APY29_RS11185 33de9212e9a9adb8bbf0e3266df23231 499 Pfam PF01436 NHL repeat 193 216 1.2E-4 T 28-03-2018 IPR001258 NHL repeat GO:0005515 APY29_RS20630 db33d0fa2334734f080a526fcd5fe1fc 610 SUPERFAMILY SSF52172 64 190 8.54E-33 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS20630 db33d0fa2334734f080a526fcd5fe1fc 610 SMART SM00052 360 602 2.7E-11 T 28-03-2018 IPR001633 EAL domain APY29_RS20630 db33d0fa2334734f080a526fcd5fe1fc 610 Gene3D G3DSA:3.40.50.2300 54 200 3.6E-32 T 28-03-2018 APY29_RS20630 db33d0fa2334734f080a526fcd5fe1fc 610 Gene3D G3DSA:3.30.70.270 201 366 4.2E-16 T 28-03-2018 APY29_RS20630 db33d0fa2334734f080a526fcd5fe1fc 610 SUPERFAMILY SSF55073 206 349 3.3E-12 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS20630 db33d0fa2334734f080a526fcd5fe1fc 610 Gene3D G3DSA:3.20.20.450 367 603 1.9E-42 T 28-03-2018 IPR001633 EAL domain APY29_RS20630 db33d0fa2334734f080a526fcd5fe1fc 610 SMART SM00267 191 356 9.0E-6 T 28-03-2018 IPR000160 GGDEF domain APY29_RS20630 db33d0fa2334734f080a526fcd5fe1fc 610 Pfam PF00563 EAL domain 370 594 4.5E-37 T 28-03-2018 IPR001633 EAL domain APY29_RS20630 db33d0fa2334734f080a526fcd5fe1fc 610 SMART SM00448 66 179 1.9E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS20630 db33d0fa2334734f080a526fcd5fe1fc 610 Pfam PF00072 Response regulator receiver domain 68 179 2.6E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS20630 db33d0fa2334734f080a526fcd5fe1fc 610 SUPERFAMILY SSF141868 370 594 1.31E-36 T 28-03-2018 IPR001633 EAL domain APY29_RS20630 db33d0fa2334734f080a526fcd5fe1fc 610 Pfam PF00990 Diguanylate cyclase, GGDEF domain 206 340 3.2E-7 T 28-03-2018 IPR000160 GGDEF domain APY29_RS20225 ec43620a7b4953ecfb80af034417987a 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 1.7E-17 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS20225 ec43620a7b4953ecfb80af034417987a 239 SMART SM00895 88 212 6.6E-20 T 28-03-2018 IPR011711 GntR, C-terminal APY29_RS20225 ec43620a7b4953ecfb80af034417987a 239 SUPERFAMILY SSF48008 84 217 1.39E-24 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal APY29_RS20225 ec43620a7b4953ecfb80af034417987a 239 SUPERFAMILY SSF46785 12 82 3.63E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS20225 ec43620a7b4953ecfb80af034417987a 239 Gene3D G3DSA:1.20.120.530 81 225 2.7E-31 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal APY29_RS20225 ec43620a7b4953ecfb80af034417987a 239 Pfam PF07729 FCD domain 88 210 9.4E-27 T 28-03-2018 IPR011711 GntR, C-terminal APY29_RS20225 ec43620a7b4953ecfb80af034417987a 239 SMART SM00345 20 78 2.0E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS20225 ec43620a7b4953ecfb80af034417987a 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 1.3E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS20225 ec43620a7b4953ecfb80af034417987a 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 1.3E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS20225 ec43620a7b4953ecfb80af034417987a 239 Gene3D G3DSA:1.10.10.10 2 80 4.1E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS06265 69d9ade6c1911136618b1060fd80b3cf 297 ProSitePatterns PS00146 Beta-lactamase class-A active site. 72 87 - T 28-03-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 APY29_RS06265 69d9ade6c1911136618b1060fd80b3cf 297 Gene3D G3DSA:3.40.710.10 33 294 1.2E-40 T 28-03-2018 APY29_RS06265 69d9ade6c1911136618b1060fd80b3cf 297 SUPERFAMILY SSF56601 39 287 2.4E-75 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like APY29_RS06265 69d9ade6c1911136618b1060fd80b3cf 297 PRINTS PR00118 Beta-lactamase class A signature 148 172 3.1E-65 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 APY29_RS06265 69d9ade6c1911136618b1060fd80b3cf 297 PRINTS PR00118 Beta-lactamase class A signature 174 199 3.1E-65 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 APY29_RS06265 69d9ade6c1911136618b1060fd80b3cf 297 PRINTS PR00118 Beta-lactamase class A signature 112 137 3.1E-65 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 APY29_RS06265 69d9ade6c1911136618b1060fd80b3cf 297 PRINTS PR00118 Beta-lactamase class A signature 227 242 3.1E-65 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 APY29_RS06265 69d9ade6c1911136618b1060fd80b3cf 297 PRINTS PR00118 Beta-lactamase class A signature 39 63 3.1E-65 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 APY29_RS06265 69d9ade6c1911136618b1060fd80b3cf 297 PRINTS PR00118 Beta-lactamase class A signature 70 87 3.1E-65 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 APY29_RS06265 69d9ade6c1911136618b1060fd80b3cf 297 PRINTS PR00118 Beta-lactamase class A signature 210 225 3.1E-65 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 APY29_RS06265 69d9ade6c1911136618b1060fd80b3cf 297 Pfam PF13354 Beta-lactamase enzyme family 60 261 3.8E-46 T 28-03-2018 APY29_RS19270 504f519d06d9bc1fc73150c36fe2d994 303 SUPERFAMILY SSF103481 195 294 2.09E-15 T 28-03-2018 APY29_RS19270 504f519d06d9bc1fc73150c36fe2d994 303 SUPERFAMILY SSF103481 46 145 6.02E-9 T 28-03-2018 APY29_RS19270 504f519d06d9bc1fc73150c36fe2d994 303 Pfam PF00892 EamA-like transporter family 19 144 2.2E-13 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 APY29_RS19270 504f519d06d9bc1fc73150c36fe2d994 303 Pfam PF00892 EamA-like transporter family 161 290 5.0E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 APY29_RS14275 0431fa52868eff0230369b157e8b0227 130 SUPERFAMILY SSF46626 28 130 8.75E-25 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS14275 0431fa52868eff0230369b157e8b0227 130 PRINTS PR00604 Class IA and IB cytochrome C signature 52 67 7.2E-13 T 28-03-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS14275 0431fa52868eff0230369b157e8b0227 130 PRINTS PR00604 Class IA and IB cytochrome C signature 120 128 7.2E-13 T 28-03-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS14275 0431fa52868eff0230369b157e8b0227 130 PRINTS PR00604 Class IA and IB cytochrome C signature 40 47 7.2E-13 T 28-03-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS14275 0431fa52868eff0230369b157e8b0227 130 PRINTS PR00604 Class IA and IB cytochrome C signature 83 99 7.2E-13 T 28-03-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS14275 0431fa52868eff0230369b157e8b0227 130 PRINTS PR00604 Class IA and IB cytochrome C signature 103 113 7.2E-13 T 28-03-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS14275 0431fa52868eff0230369b157e8b0227 130 Pfam PF00034 Cytochrome c 30 130 1.7E-8 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS14275 0431fa52868eff0230369b157e8b0227 130 Gene3D G3DSA:1.10.760.10 26 130 7.8E-21 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS15990 7fb0e185509810cde2a2a2f49f4d076c 84 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 3.1E-30 T 28-03-2018 IPR021250 Protein of unknown function DUF2789 APY29_RS19175 65b0da9dccef7c71c41cbfc05700a032 597 PIRSF PIRSF001294 1 596 2.5E-228 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 APY29_RS19175 65b0da9dccef7c71c41cbfc05700a032 597 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 594 27.566 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 APY29_RS19175 65b0da9dccef7c71c41cbfc05700a032 597 Pfam PF03814 Potassium-transporting ATPase A subunit 6 592 4.4E-211 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 APY29_RS19175 65b0da9dccef7c71c41cbfc05700a032 597 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 202 594 5.4E-120 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 APY29_RS14900 8ec30ee996840a71cd64d6424d6a9182 324 Gene3D G3DSA:1.10.3720.10 16 312 6.8E-34 T 28-03-2018 APY29_RS14900 8ec30ee996840a71cd64d6424d6a9182 324 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 25 317 4.8E-91 T 28-03-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 APY29_RS14900 8ec30ee996840a71cd64d6424d6a9182 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 311 2.9E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS14900 8ec30ee996840a71cd64d6424d6a9182 324 SUPERFAMILY SSF161098 33 311 2.35E-34 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS00150 09f0c7fe9a97908e63ac7b3de2c94f92 149 Pfam PF08808 RES domain 5 125 1.0E-13 T 28-03-2018 IPR014914 RES domain APY29_RS00150 09f0c7fe9a97908e63ac7b3de2c94f92 149 SMART SM00953 12 135 1.2E-12 T 28-03-2018 IPR014914 RES domain APY29_RS00520 27753aaf5c242179e75c4e88cb960dd3 245 SUPERFAMILY SSF51735 4 244 3.38E-76 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS00520 27753aaf5c242179e75c4e88cb960dd3 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.5E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS00520 27753aaf5c242179e75c4e88cb960dd3 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.5E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS00520 27753aaf5c242179e75c4e88cb960dd3 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.5E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS00520 27753aaf5c242179e75c4e88cb960dd3 245 Gene3D G3DSA:3.40.50.720 2 245 3.8E-70 T 28-03-2018 APY29_RS00520 27753aaf5c242179e75c4e88cb960dd3 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.1E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS00520 27753aaf5c242179e75c4e88cb960dd3 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.1E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS00520 27753aaf5c242179e75c4e88cb960dd3 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.1E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS00520 27753aaf5c242179e75c4e88cb960dd3 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.1E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS00520 27753aaf5c242179e75c4e88cb960dd3 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.1E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS00520 27753aaf5c242179e75c4e88cb960dd3 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.1E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS00520 27753aaf5c242179e75c4e88cb960dd3 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 184 0.003 T 28-03-2018 APY29_RS00520 27753aaf5c242179e75c4e88cb960dd3 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 8.5E-58 T 28-03-2018 APY29_RS00205 19ab99e5172d7bd4bdca00cd5fa7bbf9 377 SUPERFAMILY SSF51445 34 337 2.7E-81 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS00205 19ab99e5172d7bd4bdca00cd5fa7bbf9 377 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 159 168 - T 28-03-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 APY29_RS00205 19ab99e5172d7bd4bdca00cd5fa7bbf9 377 Gene3D G3DSA:3.20.20.80 31 345 1.3E-57 T 28-03-2018 APY29_RS00205 19ab99e5172d7bd4bdca00cd5fa7bbf9 377 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 42 314 6.4E-54 T 28-03-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 APY29_RS04040 96c2b388ece3095fc419fc7ceaca6737 320 SUPERFAMILY SSF53474 45 315 5.68E-45 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS04040 96c2b388ece3095fc419fc7ceaca6737 320 Pfam PF00756 Putative esterase 57 254 2.3E-14 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 APY29_RS04040 96c2b388ece3095fc419fc7ceaca6737 320 Gene3D G3DSA:3.40.50.1820 34 320 1.8E-26 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS01920 df016a57b8811dd49161125ab41adeb8 1004 SUPERFAMILY SSF56935 309 522 4.27E-91 T 28-03-2018 APY29_RS01920 df016a57b8811dd49161125ab41adeb8 1004 SUPERFAMILY SSF56935 44 255 4.27E-91 T 28-03-2018 APY29_RS01920 df016a57b8811dd49161125ab41adeb8 1004 SUPERFAMILY SSF56935 579 768 4.27E-91 T 28-03-2018 APY29_RS01920 df016a57b8811dd49161125ab41adeb8 1004 SUPERFAMILY SSF56935 841 1003 4.27E-91 T 28-03-2018 APY29_RS01920 df016a57b8811dd49161125ab41adeb8 1004 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 50 1003 2.5E-200 T 28-03-2018 IPR010104 Bacterial TonB-dependent receptor APY29_RS01920 df016a57b8811dd49161125ab41adeb8 1004 Gene3D G3DSA:2.40.170.20 212 1003 1.0E-72 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS01920 df016a57b8811dd49161125ab41adeb8 1004 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 176 3.8E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS01920 df016a57b8811dd49161125ab41adeb8 1004 Gene3D G3DSA:2.170.130.10 41 192 7.8E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS01920 df016a57b8811dd49161125ab41adeb8 1004 Pfam PF00593 TonB dependent receptor 461 1002 2.9E-35 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS11985 cb7863cd12300b1af7ad102655653058 115 Gene3D G3DSA:3.50.50.60 1 75 1.4E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS11985 cb7863cd12300b1af7ad102655653058 115 SUPERFAMILY SSF51905 2 90 2.81E-13 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS10660 e46f696103ca3ce6ff1065b4b4a5928c 106 Gene3D G3DSA:1.10.3340.10 7 90 2.6E-40 T 28-03-2018 IPR023163 SMc04008-like domain APY29_RS10660 e46f696103ca3ce6ff1065b4b4a5928c 106 SUPERFAMILY SSF158757 8 84 3.4E-34 T 28-03-2018 IPR023163 SMc04008-like domain APY29_RS10660 e46f696103ca3ce6ff1065b4b4a5928c 106 Pfam PF06844 Protein of unknown function (DUF1244) 34 99 2.8E-36 T 28-03-2018 IPR023163 SMc04008-like domain APY29_RS14360 03fd2bbb513c6c16d894492e2b49dac8 253 Pfam PF13490 Putative zinc-finger 47 80 3.4E-5 T 28-03-2018 IPR027383 Putative zinc-finger APY29_RS08715 39b5fc18de8e6da6f3f272dc12bc6c7f 142 Gene3D G3DSA:1.10.490.10 15 142 4.1E-26 T 28-03-2018 APY29_RS08715 39b5fc18de8e6da6f3f272dc12bc6c7f 142 PIRSF PIRSF002030 14 142 1.9E-45 T 28-03-2018 IPR016339 Truncated hemoglobin, group 1 APY29_RS08715 39b5fc18de8e6da6f3f272dc12bc6c7f 142 SUPERFAMILY SSF46458 19 141 2.47E-30 T 28-03-2018 IPR009050 Globin-like APY29_RS08715 39b5fc18de8e6da6f3f272dc12bc6c7f 142 Pfam PF01152 Bacterial-like globin 27 139 1.3E-11 T 28-03-2018 IPR001486 Truncated hemoglobin GO:0019825 APY29_RS19930 97b9157c768366f7d10a078dd97b723c 476 Gene3D G3DSA:3.20.20.80 20 369 1.2E-65 T 28-03-2018 APY29_RS19930 97b9157c768366f7d10a078dd97b723c 476 SUPERFAMILY SSF49384 390 475 2.93E-21 T 28-03-2018 IPR008965 Carbohydrate-binding domain GO:0030246 APY29_RS19930 97b9157c768366f7d10a078dd97b723c 476 Pfam PF00553 Cellulose binding domain 403 474 5.6E-16 T 28-03-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 APY29_RS19930 97b9157c768366f7d10a078dd97b723c 476 SMART SM00637 396 476 5.6E-13 T 28-03-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 APY29_RS19930 97b9157c768366f7d10a078dd97b723c 476 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 35 342 1.9E-57 T 28-03-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 APY29_RS19930 97b9157c768366f7d10a078dd97b723c 476 Gene3D G3DSA:2.60.40.290 387 476 2.1E-21 T 28-03-2018 APY29_RS19930 97b9157c768366f7d10a078dd97b723c 476 SUPERFAMILY SSF51445 22 372 1.06E-83 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS19930 97b9157c768366f7d10a078dd97b723c 476 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 174 183 - T 28-03-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 APY29_RS02000 0e9a5833766843ec2d37231a1ee574f7 293 Gene3D G3DSA:2.130.10.150 36 287 7.0E-24 T 28-03-2018 APY29_RS02000 0e9a5833766843ec2d37231a1ee574f7 293 Pfam PF07676 WD40-like Beta Propeller Repeat 137 174 1.3E-6 T 28-03-2018 IPR011659 WD40-like Beta Propeller APY29_RS02000 0e9a5833766843ec2d37231a1ee574f7 293 Pfam PF07676 WD40-like Beta Propeller Repeat 82 120 4.2E-11 T 28-03-2018 IPR011659 WD40-like Beta Propeller APY29_RS02000 0e9a5833766843ec2d37231a1ee574f7 293 Pfam PF07676 WD40-like Beta Propeller Repeat 33 68 4.7E-9 T 28-03-2018 IPR011659 WD40-like Beta Propeller APY29_RS02000 0e9a5833766843ec2d37231a1ee574f7 293 SUPERFAMILY SSF82171 36 222 1.01E-19 T 28-03-2018 APY29_RS08025 19d4b91aa2f763c86751c90677511ad0 432 SUPERFAMILY SSF53649 36 406 3.53E-93 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APY29_RS08025 19d4b91aa2f763c86751c90677511ad0 432 Gene3D G3DSA:3.40.720.10 40 432 8.4E-64 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APY29_RS08025 19d4b91aa2f763c86751c90677511ad0 432 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 48 366 9.0E-84 T 28-03-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 APY29_RS05450 92c56e5f16da0d0b91a790041f8b39cc 121 SUPERFAMILY SSF46785 1 118 9.43E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS05450 92c56e5f16da0d0b91a790041f8b39cc 121 PIRSF PIRSF019455 1 121 8.6E-39 T 28-03-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 APY29_RS05450 92c56e5f16da0d0b91a790041f8b39cc 121 Gene3D G3DSA:1.10.4040.10 68 116 1.7E-14 T 28-03-2018 APY29_RS05450 92c56e5f16da0d0b91a790041f8b39cc 121 Gene3D G3DSA:1.10.10.10 4 65 6.4E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS05450 92c56e5f16da0d0b91a790041f8b39cc 121 Pfam PF03965 Penicillinase repressor 3 116 9.4E-36 T 28-03-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 APY29_RS08080 f76657e33142805298ef9714b24c692a 632 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 4 584 47.482 T 28-03-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 APY29_RS08080 f76657e33142805298ef9714b24c692a 632 Gene3D G3DSA:3.40.50.300 12 223 1.7E-59 T 28-03-2018 APY29_RS08080 f76657e33142805298ef9714b24c692a 632 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 157 165 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APY29_RS08080 f76657e33142805298ef9714b24c692a 632 Pfam PF00271 Helicase conserved C-terminal domain 235 343 2.7E-28 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS08080 f76657e33142805298ef9714b24c692a 632 Pfam PF03880 DbpA RNA binding domain 513 582 1.1E-22 T 28-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain APY29_RS08080 f76657e33142805298ef9714b24c692a 632 Gene3D G3DSA:3.40.50.300 224 377 1.1E-44 T 28-03-2018 APY29_RS08080 f76657e33142805298ef9714b24c692a 632 SMART SM00490 262 343 1.6E-32 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS08080 f76657e33142805298ef9714b24c692a 632 Pfam PF00270 DEAD/DEAH box helicase 34 197 1.5E-51 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APY29_RS08080 f76657e33142805298ef9714b24c692a 632 SUPERFAMILY SSF52540 78 364 2.3E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS08080 f76657e33142805298ef9714b24c692a 632 SMART SM00487 28 226 6.2E-64 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APY29_RS07870 278a85b19cdf3cbaf5549e9617aba8e6 439 Pfam PF06123 Inner membrane protein CreD 6 432 8.8E-143 T 28-03-2018 IPR010364 Uncharacterised protein family, inner membrane CreD APY29_RS07870 278a85b19cdf3cbaf5549e9617aba8e6 439 PIRSF PIRSF004548 1 439 1.9E-156 T 28-03-2018 IPR010364 Uncharacterised protein family, inner membrane CreD APY29_RS15745 cce0419873928248e86852294799ea4d 149 Gene3D G3DSA:1.25.40.10 13 142 0.0014 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS16165 41e931a74465e4135ae864f123d3665b 266 SUPERFAMILY SSF51306 61 250 1.31E-60 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C APY29_RS16165 41e931a74465e4135ae864f123d3665b 266 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 49 246 3.4E-45 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APY29_RS16165 41e931a74465e4135ae864f123d3665b 266 ProSitePatterns PS00760 Signal peptidases I lysine active site. 129 141 - T 28-03-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 APY29_RS16165 41e931a74465e4135ae864f123d3665b 266 ProSitePatterns PS00761 Signal peptidases I signature 3. 209 222 - T 28-03-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 APY29_RS16165 41e931a74465e4135ae864f123d3665b 266 Gene3D G3DSA:2.10.109.10 59 261 6.1E-52 T 28-03-2018 APY29_RS16165 41e931a74465e4135ae864f123d3665b 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 63 79 1.2E-22 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APY29_RS16165 41e931a74465e4135ae864f123d3665b 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 204 223 1.2E-22 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APY29_RS16165 41e931a74465e4135ae864f123d3665b 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 127 139 1.2E-22 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APY29_RS16165 41e931a74465e4135ae864f123d3665b 266 Pfam PF00717 Peptidase S24-like 69 151 1.1E-21 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C APY29_RS19210 c42933f59ac6df3be0ef422e8cb8c50c 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 150 5.7E-52 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 APY29_RS19210 c42933f59ac6df3be0ef422e8cb8c50c 154 Gene3D G3DSA:3.40.50.960 1 154 1.4E-57 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 APY29_RS19210 c42933f59ac6df3be0ef422e8cb8c50c 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 28.438 T 28-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 APY29_RS19210 c42933f59ac6df3be0ef422e8cb8c50c 154 SUPERFAMILY SSF52121 4 153 2.09E-53 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 APY29_RS19210 c42933f59ac6df3be0ef422e8cb8c50c 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 149 4.2E-43 T 28-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 APY29_RS09935 1317f76ec7f0e63986fccb39dd69dab9 206 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 6 190 2.1E-53 T 28-03-2018 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 APY29_RS09935 1317f76ec7f0e63986fccb39dd69dab9 206 Gene3D G3DSA:3.10.300.10 2 197 1.9E-66 T 28-03-2018 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 APY29_RS09935 1317f76ec7f0e63986fccb39dd69dab9 206 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 8 190 31.693 T 28-03-2018 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 APY29_RS09935 1317f76ec7f0e63986fccb39dd69dab9 206 SUPERFAMILY SSF50486 4 195 7.85E-64 T 28-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 APY29_RS09935 1317f76ec7f0e63986fccb39dd69dab9 206 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 10 186 5.1E-62 T 28-03-2018 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 APY29_RS16055 d5fe07d66729a5ac4ff0d64c1485f43b 184 Pfam PF04519 Polymer-forming cytoskeletal 62 157 2.3E-22 T 28-03-2018 IPR007607 Protein of unknown function DUF583 APY29_RS16365 c67982c5ecc8ac476fcc4da5b9b0040c 458 SMART SM00962 100 296 2.2E-114 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 APY29_RS16365 c67982c5ecc8ac476fcc4da5b9b0040c 458 SUPERFAMILY SSF52540 42 353 1.33E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS16365 c67982c5ecc8ac476fcc4da5b9b0040c 458 Pfam PF02978 Signal peptide binding domain 328 427 6.4E-33 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 APY29_RS16365 c67982c5ecc8ac476fcc4da5b9b0040c 458 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 APY29_RS16365 c67982c5ecc8ac476fcc4da5b9b0040c 458 SUPERFAMILY SSF47446 328 430 5.4E-37 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 APY29_RS16365 c67982c5ecc8ac476fcc4da5b9b0040c 458 Gene3D G3DSA:1.20.120.140 1 91 7.9E-28 T 28-03-2018 APY29_RS16365 c67982c5ecc8ac476fcc4da5b9b0040c 458 Gene3D G3DSA:1.10.260.30 328 432 2.0E-37 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 APY29_RS16365 c67982c5ecc8ac476fcc4da5b9b0040c 458 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 428 1.5E-175 T 28-03-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 APY29_RS16365 c67982c5ecc8ac476fcc4da5b9b0040c 458 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 9.8E-20 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 APY29_RS16365 c67982c5ecc8ac476fcc4da5b9b0040c 458 Gene3D G3DSA:3.40.50.300 92 297 3.4E-38 T 28-03-2018 APY29_RS16365 c67982c5ecc8ac476fcc4da5b9b0040c 458 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 33.906 T 28-03-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 APY29_RS16365 c67982c5ecc8ac476fcc4da5b9b0040c 458 SMART SM00963 1 86 1.5E-34 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 APY29_RS16365 c67982c5ecc8ac476fcc4da5b9b0040c 458 SMART SM00382 99 301 8.1E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS16365 c67982c5ecc8ac476fcc4da5b9b0040c 458 Pfam PF00448 SRP54-type protein, GTPase domain 101 295 1.5E-73 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 APY29_RS01700 d9023301882610998fc8cb95b124a25d 399 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 250 356 1.2E-28 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal APY29_RS01700 d9023301882610998fc8cb95b124a25d 399 Gene3D G3DSA:3.40.47.10 253 399 3.8E-45 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS01700 d9023301882610998fc8cb95b124a25d 399 SUPERFAMILY SSF53901 212 398 1.65E-48 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS01700 d9023301882610998fc8cb95b124a25d 399 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site APY29_RS01700 d9023301882610998fc8cb95b124a25d 399 SMART SM00825 Beta-ketoacyl synthase 4 399 3.9E-8 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APY29_RS01700 d9023301882610998fc8cb95b124a25d 399 Gene3D G3DSA:3.40.47.10 4 251 3.3E-34 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS01700 d9023301882610998fc8cb95b124a25d 399 SUPERFAMILY SSF53901 1 242 2.03E-32 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS01700 d9023301882610998fc8cb95b124a25d 399 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 73 239 1.8E-20 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal APY29_RS06065 877024511a71c49ba4024a7121467bfb 719 Pfam PF07715 TonB-dependent Receptor Plug Domain 36 144 3.6E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS06065 877024511a71c49ba4024a7121467bfb 719 Gene3D G3DSA:2.40.170.20 163 719 5.6E-72 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS06065 877024511a71c49ba4024a7121467bfb 719 Pfam PF00593 TonB dependent receptor 252 705 2.4E-46 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS06065 877024511a71c49ba4024a7121467bfb 719 SUPERFAMILY SSF56935 14 714 2.04E-119 T 28-03-2018 APY29_RS06065 877024511a71c49ba4024a7121467bfb 719 Gene3D G3DSA:2.170.130.10 14 150 5.8E-27 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS15920 3a168b8693ad843f29557df367fa2221 64 Pfam PF09791 Oxidoreductase-like protein, N-terminal 14 52 1.6E-13 T 28-03-2018 IPR019180 Oxidoreductase-like, N-terminal APY29_RS16445 bcab55c2793aa3a51932d11fdcfc143a 549 SUPERFAMILY SSF75005 39 347 1.24E-87 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APY29_RS16445 bcab55c2793aa3a51932d11fdcfc143a 549 Gene3D G3DSA:2.115.10.20 37 346 1.2E-67 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APY29_RS16445 bcab55c2793aa3a51932d11fdcfc143a 549 Gene3D G3DSA:2.60.120.200 361 549 3.6E-28 T 28-03-2018 APY29_RS16445 bcab55c2793aa3a51932d11fdcfc143a 549 Pfam PF04616 Glycosyl hydrolases family 43 39 331 4.8E-98 T 28-03-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APY29_RS16445 bcab55c2793aa3a51932d11fdcfc143a 549 SUPERFAMILY SSF49899 361 547 5.14E-31 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain APY29_RS09725 407de6a72372c03aba9d63ebe7e4b956 559 Gene3D G3DSA:1.20.1250.20 267 489 1.5E-18 T 28-03-2018 APY29_RS09725 407de6a72372c03aba9d63ebe7e4b956 559 Pfam PF07690 Major Facilitator Superfamily 40 440 7.4E-36 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS09725 407de6a72372c03aba9d63ebe7e4b956 559 SUPERFAMILY SSF103473 27 488 3.66E-44 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS09725 407de6a72372c03aba9d63ebe7e4b956 559 Gene3D G3DSA:1.20.1250.20 20 248 3.7E-18 T 28-03-2018 APY29_RS14985 602270d7693ff30b51c5525e80f4390f 331 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 6.7E-15 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APY29_RS14985 602270d7693ff30b51c5525e80f4390f 331 Gene3D G3DSA:3.40.50.150 95 303 3.1E-33 T 28-03-2018 APY29_RS14985 602270d7693ff30b51c5525e80f4390f 331 SUPERFAMILY SSF46785 1 82 4.4E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS14985 602270d7693ff30b51c5525e80f4390f 331 SMART SM00418 8 88 4.5E-19 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APY29_RS14985 602270d7693ff30b51c5525e80f4390f 331 Pfam PF08241 Methyltransferase domain 152 245 2.7E-24 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APY29_RS14985 602270d7693ff30b51c5525e80f4390f 331 Gene3D G3DSA:1.10.10.10 1 87 6.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS14985 602270d7693ff30b51c5525e80f4390f 331 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 1.2E-11 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APY29_RS14985 602270d7693ff30b51c5525e80f4390f 331 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 1.2E-11 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APY29_RS14985 602270d7693ff30b51c5525e80f4390f 331 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.2E-11 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APY29_RS14985 602270d7693ff30b51c5525e80f4390f 331 SUPERFAMILY SSF53335 124 303 1.25E-36 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS06780 329a35ed539ce47ad6dc714e1719dcf7 339 Gene3D G3DSA:1.10.287.1080 9 128 1.4E-39 T 28-03-2018 APY29_RS06780 329a35ed539ce47ad6dc714e1719dcf7 339 SUPERFAMILY SSF101386 9 108 2.29E-21 T 28-03-2018 APY29_RS06780 329a35ed539ce47ad6dc714e1719dcf7 339 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 33 106 1.9E-27 T 28-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core APY29_RS06780 329a35ed539ce47ad6dc714e1719dcf7 339 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 174 236 1.1E-6 T 28-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core APY29_RS06780 329a35ed539ce47ad6dc714e1719dcf7 339 SUPERFAMILY SSF101386 145 245 8.78E-24 T 28-03-2018 APY29_RS06780 329a35ed539ce47ad6dc714e1719dcf7 339 Gene3D G3DSA:1.10.287.1080 145 273 3.2E-26 T 28-03-2018 APY29_RS06780 329a35ed539ce47ad6dc714e1719dcf7 339 TIGRFAM TIGR00444 mazG: MazG family protein 16 267 1.9E-88 T 28-03-2018 IPR011551 NTP pyrophosphohydrolase MazG APY29_RS00185 3978fca52c4d615d5c54491d98a9d008 411 Gene3D G3DSA:1.20.120.330 15 121 1.9E-4 T 28-03-2018 APY29_RS00185 3978fca52c4d615d5c54491d98a9d008 411 SUPERFAMILY SSF51261 196 408 1.41E-45 T 28-03-2018 IPR011055 Duplicated hybrid motif APY29_RS00185 3978fca52c4d615d5c54491d98a9d008 411 Gene3D G3DSA:1.20.5.50 132 255 0.14 T 28-03-2018 APY29_RS00185 3978fca52c4d615d5c54491d98a9d008 411 Pfam PF01551 Peptidase family M23 311 404 8.1E-28 T 28-03-2018 IPR016047 Peptidase M23 APY29_RS00185 3978fca52c4d615d5c54491d98a9d008 411 Gene3D G3DSA:2.70.70.10 275 410 1.6E-33 T 28-03-2018 APY29_RS14260 c6c25c369b36b259149fc86b5797201c 145 Gene3D G3DSA:2.60.120.10 1 141 7.0E-28 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS14260 c6c25c369b36b259149fc86b5797201c 145 Pfam PF05523 WxcM-like, C-terminal 3 132 7.0E-46 T 28-03-2018 IPR008894 WxcM-like, C-terminal KEGG: 00523+5.3.2.3|MetaCyc: PWY-6953|MetaCyc: PWY-7688 APY29_RS14260 c6c25c369b36b259149fc86b5797201c 145 SUPERFAMILY SSF51182 5 129 1.7E-35 T 28-03-2018 IPR011051 RmlC-like cupin domain APY29_RS11830 113d32af85398f5b12636fb70ab35b74 215 Gene3D G3DSA:3.40.50.2300 2 126 2.0E-30 T 28-03-2018 APY29_RS11830 113d32af85398f5b12636fb70ab35b74 215 SMART SM00421 146 203 1.9E-17 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS11830 113d32af85398f5b12636fb70ab35b74 215 SUPERFAMILY SSF52172 2 132 1.1E-29 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS11830 113d32af85398f5b12636fb70ab35b74 215 Gene3D G3DSA:1.10.10.10 127 213 1.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS11830 113d32af85398f5b12636fb70ab35b74 215 Pfam PF00072 Response regulator receiver domain 5 116 8.9E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS11830 113d32af85398f5b12636fb70ab35b74 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 4.4E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS11830 113d32af85398f5b12636fb70ab35b74 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 4.4E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS11830 113d32af85398f5b12636fb70ab35b74 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 4.4E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS11830 113d32af85398f5b12636fb70ab35b74 215 SUPERFAMILY SSF46894 144 210 4.76E-18 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS11830 113d32af85398f5b12636fb70ab35b74 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 3.0E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS11830 113d32af85398f5b12636fb70ab35b74 215 SMART SM00448 3 116 1.2E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS10770 ed505ae7bea051e6cf90c77652cfb6b2 815 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 182 388 2.0E-13 T 28-03-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 APY29_RS10770 ed505ae7bea051e6cf90c77652cfb6b2 815 SMART SM00382 440 704 1.4E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS10770 ed505ae7bea051e6cf90c77652cfb6b2 815 Gene3D G3DSA:3.40.50.300 393 768 2.4E-31 T 28-03-2018 APY29_RS10770 ed505ae7bea051e6cf90c77652cfb6b2 815 SUPERFAMILY SSF52540 397 738 1.15E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS21135 b14ce89df6ea08a3717903f7ac6e99e6 156 SUPERFAMILY SSF69635 50 133 2.15E-6 T 28-03-2018 APY29_RS21135 b14ce89df6ea08a3717903f7ac6e99e6 156 Gene3D G3DSA:3.30.1460.10 3 135 6.8E-40 T 28-03-2018 APY29_RS21135 b14ce89df6ea08a3717903f7ac6e99e6 156 Pfam PF05932 Tir chaperone protein (CesT) family 53 131 1.5E-5 T 28-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 APY29_RS15000 da509a7a5cdbe8b5118016718d3aa2b9 401 SUPERFAMILY SSF48208 12 398 1.46E-122 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 APY29_RS15000 da509a7a5cdbe8b5118016718d3aa2b9 401 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 39 389 2.1E-125 T 28-03-2018 APY29_RS15000 da509a7a5cdbe8b5118016718d3aa2b9 401 Gene3D G3DSA:1.50.10.10 8 401 2.9E-87 T 28-03-2018 APY29_RS16855 63310ffe5320322fd4542cb214187d53 85 SUPERFAMILY SSF55229 31 82 1.1E-13 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 APY29_RS16855 63310ffe5320322fd4542cb214187d53 85 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 81 3.0E-27 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 APY29_RS16855 63310ffe5320322fd4542cb214187d53 85 Gene3D G3DSA:3.30.1070.10 1 81 3.8E-25 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 APY29_RS16855 63310ffe5320322fd4542cb214187d53 85 Pfam PF03776 Septum formation topological specificity factor MinE 13 80 3.9E-21 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 APY29_RS16855 63310ffe5320322fd4542cb214187d53 85 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 82 17.262 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 APY29_RS03090 c9557f0b7f0dd4d3a111f7f8babcc5db 274 Gene3D G3DSA:3.90.550.10 2 160 3.8E-21 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS03090 c9557f0b7f0dd4d3a111f7f8babcc5db 274 Pfam PF00535 Glycosyl transferase family 2 14 108 6.1E-16 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 APY29_RS03090 c9557f0b7f0dd4d3a111f7f8babcc5db 274 SUPERFAMILY SSF53448 6 157 5.27E-23 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS15160 9c3fe083b9181ebc27a5cbfaf3eaef1e 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 255 2.2E-10 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APY29_RS15160 9c3fe083b9181ebc27a5cbfaf3eaef1e 361 Gene3D G3DSA:3.90.1170.30 22 114 1.7E-4 T 28-03-2018 APY29_RS15160 9c3fe083b9181ebc27a5cbfaf3eaef1e 361 Gene3D G3DSA:1.20.1600.10 115 283 6.3E-19 T 28-03-2018 APY29_RS15160 9c3fe083b9181ebc27a5cbfaf3eaef1e 361 SUPERFAMILY SSF111369 66 214 5.23E-10 T 28-03-2018 APY29_RS15095 0801d5cf232abd1897a720e5cd2df527 316 Gene3D G3DSA:3.40.33.10 44 180 1.9E-4 T 28-03-2018 IPR014044 CAP domain APY29_RS15095 0801d5cf232abd1897a720e5cd2df527 316 SUPERFAMILY SSF55797 50 177 2.56E-6 T 28-03-2018 IPR014044 CAP domain APY29_RS15095 0801d5cf232abd1897a720e5cd2df527 316 Pfam PF00188 Cysteine-rich secretory protein family 57 178 2.7E-5 T 28-03-2018 IPR014044 CAP domain APY29_RS16230 071fcfb48ae338372ed36223145d0f98 897 Gene3D G3DSA:2.40.170.20 196 897 1.6E-57 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS16230 071fcfb48ae338372ed36223145d0f98 897 SUPERFAMILY SSF56935 532 897 3.52E-72 T 28-03-2018 APY29_RS16230 071fcfb48ae338372ed36223145d0f98 897 SUPERFAMILY SSF56935 294 502 3.52E-72 T 28-03-2018 APY29_RS16230 071fcfb48ae338372ed36223145d0f98 897 SUPERFAMILY SSF56935 60 259 3.52E-72 T 28-03-2018 APY29_RS16230 071fcfb48ae338372ed36223145d0f98 897 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 65 897 7.4E-208 T 28-03-2018 IPR010104 Bacterial TonB-dependent receptor APY29_RS16230 071fcfb48ae338372ed36223145d0f98 897 Pfam PF07715 TonB-dependent Receptor Plug Domain 84 183 1.6E-12 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS16230 071fcfb48ae338372ed36223145d0f98 897 Gene3D G3DSA:2.170.130.10 58 193 1.1E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS16230 071fcfb48ae338372ed36223145d0f98 897 Pfam PF00593 TonB dependent receptor 415 896 2.7E-21 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS13655 924f5ca50393379f7f760f8b351b1eb6 243 SMART SM00014 104 213 3.8E-16 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APY29_RS13655 924f5ca50393379f7f760f8b351b1eb6 243 Pfam PF01569 PAP2 superfamily 108 217 7.3E-20 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APY29_RS13655 924f5ca50393379f7f760f8b351b1eb6 243 SUPERFAMILY SSF48317 31 228 2.49E-37 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APY29_RS13655 924f5ca50393379f7f760f8b351b1eb6 243 Gene3D G3DSA:1.20.144.10 10 229 2.0E-25 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APY29_RS02350 5e21ce873b8bfbcca94cbf7eafa353d4 197 Pfam PF13628 Domain of unknown function (DUF4142) 54 192 3.0E-14 T 28-03-2018 IPR025419 Domain of unknown function DUF4142 APY29_RS02350 5e21ce873b8bfbcca94cbf7eafa353d4 197 Gene3D G3DSA:1.20.1260.10 44 195 1.0E-5 T 28-03-2018 IPR012347 Ferritin-related APY29_RS09525 cf72f119faf0f2019b3678df33298315 838 Gene3D G3DSA:2.40.170.20 170 837 1.9E-65 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS09525 cf72f119faf0f2019b3678df33298315 838 Pfam PF00593 TonB dependent receptor 361 836 1.3E-38 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS09525 cf72f119faf0f2019b3678df33298315 838 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 153 4.7E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS09525 cf72f119faf0f2019b3678df33298315 838 Gene3D G3DSA:2.170.130.10 21 158 2.9E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS09525 cf72f119faf0f2019b3678df33298315 838 SUPERFAMILY SSF56935 21 218 4.58E-91 T 28-03-2018 APY29_RS09525 cf72f119faf0f2019b3678df33298315 838 SUPERFAMILY SSF56935 246 443 4.58E-91 T 28-03-2018 APY29_RS09525 cf72f119faf0f2019b3678df33298315 838 SUPERFAMILY SSF56935 481 836 4.58E-91 T 28-03-2018 APY29_RS09525 cf72f119faf0f2019b3678df33298315 838 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 29 837 1.5E-226 T 28-03-2018 IPR010104 Bacterial TonB-dependent receptor APY29_RS19700 c77608d615d857b2903d93f0d50981ca 447 Pfam PF04085 rod shape-determining protein MreC 133 274 2.5E-33 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 APY29_RS19700 c77608d615d857b2903d93f0d50981ca 447 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 18 276 8.2E-51 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 APY29_RS12560 9d190abe94040fb41418c314d527f097 642 SUPERFAMILY SSF54001 264 345 5.89E-9 T 28-03-2018 APY29_RS12560 9d190abe94040fb41418c314d527f097 642 Pfam PF01841 Transglutaminase-like superfamily 269 342 3.2E-8 T 28-03-2018 IPR002931 Transglutaminase-like APY29_RS12560 9d190abe94040fb41418c314d527f097 642 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 54 222 2.5E-35 T 28-03-2018 IPR024618 Domain of unknown function DUF3857 APY29_RS07640 858892cf271121737ed4541475a70dea 178 PIRSF PIRSF002070 1 116 7.7E-34 T 28-03-2018 APY29_RS07640 858892cf271121737ed4541475a70dea 178 PIRSF PIRSF002070 148 177 780.0 T 28-03-2018 APY29_RS07640 858892cf271121737ed4541475a70dea 178 SUPERFAMILY SSF50249 3 178 1.17E-56 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS07640 858892cf271121737ed4541475a70dea 178 Pfam PF00436 Single-strand binding protein family 5 108 5.6E-39 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 APY29_RS07640 858892cf271121737ed4541475a70dea 178 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 36.083 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 APY29_RS07640 858892cf271121737ed4541475a70dea 178 Gene3D G3DSA:2.40.50.140 1 127 5.7E-42 T 28-03-2018 APY29_RS07640 858892cf271121737ed4541475a70dea 178 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 178 3.0E-49 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 APY29_RS23100 5b5b001c73c8349a4ab71a8405dc2deb 298 SUPERFAMILY SSF55120 80 291 5.14E-49 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS23100 5b5b001c73c8349a4ab71a8405dc2deb 298 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS23100 5b5b001c73c8349a4ab71a8405dc2deb 298 Gene3D G3DSA:3.30.2350.10 88 291 3.2E-45 T 28-03-2018 APY29_RS23100 5b5b001c73c8349a4ab71a8405dc2deb 298 Pfam PF00849 RNA pseudouridylate synthase 96 242 9.4E-27 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS05255 0de6ca7d0b19c04cb7973c7c9a9b3785 807 Pfam PF07793 Protein of unknown function (DUF1631) 22 793 7.4E-200 T 28-03-2018 IPR012434 Protein of unknown function DUF1631 APY29_RS04605 b1f59e768e037c6a62dc0fbf094dcc4a 393 SUPERFAMILY SSF48208 25 375 1.41E-90 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 APY29_RS04605 b1f59e768e037c6a62dc0fbf094dcc4a 393 Gene3D G3DSA:1.50.10.10 39 384 6.4E-88 T 28-03-2018 APY29_RS04605 b1f59e768e037c6a62dc0fbf094dcc4a 393 Pfam PF01270 Glycosyl hydrolases family 8 23 367 1.1E-59 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APY29_RS04605 b1f59e768e037c6a62dc0fbf094dcc4a 393 PRINTS PR00735 Glycosyl hydrolase family 8 signature 131 149 7.3E-16 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APY29_RS04605 b1f59e768e037c6a62dc0fbf094dcc4a 393 PRINTS PR00735 Glycosyl hydrolase family 8 signature 196 213 7.3E-16 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APY29_RS04605 b1f59e768e037c6a62dc0fbf094dcc4a 393 PRINTS PR00735 Glycosyl hydrolase family 8 signature 234 245 7.3E-16 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APY29_RS04605 b1f59e768e037c6a62dc0fbf094dcc4a 393 PRINTS PR00735 Glycosyl hydrolase family 8 signature 355 369 7.3E-16 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APY29_RS04605 b1f59e768e037c6a62dc0fbf094dcc4a 393 PRINTS PR00735 Glycosyl hydrolase family 8 signature 69 82 7.3E-16 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APY29_RS04605 b1f59e768e037c6a62dc0fbf094dcc4a 393 PRINTS PR00735 Glycosyl hydrolase family 8 signature 258 267 7.3E-16 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APY29_RS14465 4be013391b7636c76f937cf644afa4f0 193 Gene3D G3DSA:3.40.50.360 1 189 4.6E-43 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS14465 4be013391b7636c76f937cf644afa4f0 193 Pfam PF02525 Flavodoxin-like fold 1 184 1.5E-47 T 28-03-2018 IPR003680 Flavodoxin-like fold APY29_RS14465 4be013391b7636c76f937cf644afa4f0 193 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 192 31.768 T 28-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 APY29_RS14465 4be013391b7636c76f937cf644afa4f0 193 SUPERFAMILY SSF52218 1 184 1.93E-52 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS07900 2eb3b8e6a051a246250ee7868a0a5f54 168 Gene3D G3DSA:1.10.10.10 13 109 5.8E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS07900 2eb3b8e6a051a246250ee7868a0a5f54 168 Pfam PF01475 Ferric uptake regulator family 35 157 1.7E-10 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 APY29_RS07900 2eb3b8e6a051a246250ee7868a0a5f54 168 SUPERFAMILY SSF46785 30 162 3.74E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS02715 44e26643f322af6d9246a3d003c8c43f 348 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 26 335 2.9E-96 T 28-03-2018 IPR016833 Putative sodium bile acid cotransporter APY29_RS02715 44e26643f322af6d9246a3d003c8c43f 348 PIRSF PIRSF026166 14 348 4.3E-133 T 28-03-2018 IPR016833 Putative sodium bile acid cotransporter APY29_RS07200 428b10805da3513d9746a8c15fb7d839 240 SMART SM00656 39 240 3.0E-7 T 28-03-2018 IPR002022 Pectate lyase APY29_RS07200 428b10805da3513d9746a8c15fb7d839 240 Gene3D G3DSA:2.160.20.10 24 239 7.9E-40 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS07200 428b10805da3513d9746a8c15fb7d839 240 SUPERFAMILY SSF51126 24 240 2.32E-41 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS07200 428b10805da3513d9746a8c15fb7d839 240 Pfam PF00544 Pectate lyase 62 240 1.5E-38 T 28-03-2018 IPR002022 Pectate lyase APY29_RS03410 9f6a19cb809e96b2d3e2f1ee596a0003 340 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 7 334 3.1E-48 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APY29_RS03410 9f6a19cb809e96b2d3e2f1ee596a0003 340 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 326 8.5E-94 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APY29_RS08150 0e7aa615287e1820ec59fed88a55c74a 359 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 242 2.2E-9 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APY29_RS08150 0e7aa615287e1820ec59fed88a55c74a 359 Gene3D G3DSA:2.40.50.100 175 322 0.0096 T 28-03-2018 APY29_RS08150 0e7aa615287e1820ec59fed88a55c74a 359 SUPERFAMILY SSF111369 54 185 1.31E-9 T 28-03-2018 APY29_RS08150 0e7aa615287e1820ec59fed88a55c74a 359 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 48 346 1.7E-57 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 APY29_RS08150 0e7aa615287e1820ec59fed88a55c74a 359 Gene3D G3DSA:2.40.50.100 54 174 1.5E-13 T 28-03-2018 APY29_RS02690 06e8c05ff86a4ae89bb3323b7197c680 240 Pfam PF02104 SURF1 family 16 220 3.9E-22 T 28-03-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS15865 cbd4f6889ae9dc40e1970e5568e08226 332 PRINTS PR00075 Fatty acid desaturase family 1 signature 231 252 3.2E-18 T 28-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 APY29_RS15865 cbd4f6889ae9dc40e1970e5568e08226 332 PRINTS PR00075 Fatty acid desaturase family 1 signature 274 288 3.2E-18 T 28-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 APY29_RS15865 cbd4f6889ae9dc40e1970e5568e08226 332 PRINTS PR00075 Fatty acid desaturase family 1 signature 135 164 3.2E-18 T 28-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 APY29_RS15865 cbd4f6889ae9dc40e1970e5568e08226 332 PRINTS PR00075 Fatty acid desaturase family 1 signature 53 73 3.2E-18 T 28-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 APY29_RS15865 cbd4f6889ae9dc40e1970e5568e08226 332 PRINTS PR00075 Fatty acid desaturase family 1 signature 98 118 3.2E-18 T 28-03-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 APY29_RS15865 cbd4f6889ae9dc40e1970e5568e08226 332 Pfam PF00487 Fatty acid desaturase 75 302 1.8E-26 T 28-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 APY29_RS03345 c62b31b176b44927dc3073a5549c8216 116 Pfam PF03692 Putative zinc- or iron-chelating domain 21 90 4.0E-9 T 28-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein APY29_RS17270 40df753abcd0aba9b999ae71c340e7ff 158 Pfam PF00011 Hsp20/alpha crystallin family 47 146 1.9E-24 T 28-03-2018 IPR002068 Alpha crystallin/Hsp20 domain APY29_RS17270 40df753abcd0aba9b999ae71c340e7ff 158 Gene3D G3DSA:2.60.40.790 8 147 1.3E-36 T 28-03-2018 IPR008978 HSP20-like chaperone APY29_RS17270 40df753abcd0aba9b999ae71c340e7ff 158 SUPERFAMILY SSF49764 23 146 2.41E-38 T 28-03-2018 IPR008978 HSP20-like chaperone APY29_RS09135 7caef204b9b9ec3d71d5fd028dec0ec2 118 Pfam PF13411 MerR HTH family regulatory protein 19 87 1.3E-21 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APY29_RS09135 7caef204b9b9ec3d71d5fd028dec0ec2 118 Gene3D G3DSA:1.10.1660.10 14 118 3.5E-25 T 28-03-2018 APY29_RS09135 7caef204b9b9ec3d71d5fd028dec0ec2 118 SUPERFAMILY SSF46955 17 113 1.88E-17 T 28-03-2018 IPR009061 Putative DNA-binding domain APY29_RS09135 7caef204b9b9ec3d71d5fd028dec0ec2 118 SMART SM00422 19 89 3.6E-6 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APY29_RS21510 7f02d1caef66a116a7750fe1faece623 297 SUPERFAMILY SSF51730 17 281 9.81E-46 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like APY29_RS21510 7f02d1caef66a116a7750fe1faece623 297 Pfam PF02219 Methylenetetrahydrofolate reductase 52 224 2.4E-8 T 28-03-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 APY29_RS21510 7f02d1caef66a116a7750fe1faece623 297 Gene3D G3DSA:3.20.20.220 4 294 1.3E-46 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like APY29_RS09030 147de3239945ca5c0195598da874d129 208 SUPERFAMILY SSF69318 71 122 1.57E-5 T 28-03-2018 APY29_RS09030 147de3239945ca5c0195598da874d129 208 Gene3D G3DSA:2.130.10.130 48 160 2.9E-5 T 28-03-2018 APY29_RS15840 43d605a104e7292f05e2e2e85e0d4c18 142 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 121 132 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APY29_RS15840 43d605a104e7292f05e2e2e85e0d4c18 142 Gene3D G3DSA:3.30.70.20 16 96 3.8E-8 T 28-03-2018 APY29_RS15840 43d605a104e7292f05e2e2e85e0d4c18 142 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 5 141 2.3E-65 T 28-03-2018 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 APY29_RS15840 43d605a104e7292f05e2e2e85e0d4c18 142 SUPERFAMILY SSF54862 12 140 1.43E-26 T 28-03-2018 APY29_RS15840 43d605a104e7292f05e2e2e85e0d4c18 142 Pfam PF04060 Putative Fe-S cluster 19 51 9.4E-14 T 28-03-2018 IPR007202 4Fe-4S domain GO:0051536 APY29_RS15840 43d605a104e7292f05e2e2e85e0d4c18 142 PIRSF PIRSF005784 1 142 8.2E-65 T 28-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 APY29_RS15840 43d605a104e7292f05e2e2e85e0d4c18 142 Gene3D G3DSA:3.30.70.20 97 142 8.2E-14 T 28-03-2018 APY29_RS15840 43d605a104e7292f05e2e2e85e0d4c18 142 Pfam PF14697 4Fe-4S dicluster domain 84 137 3.3E-15 T 28-03-2018 APY29_RS08555 a024c63e8f21524339a261199477a731 116 Gene3D G3DSA:3.30.1190.10 33 111 3.8E-12 T 28-03-2018 APY29_RS08555 a024c63e8f21524339a261199477a731 116 Pfam PF01381 Helix-turn-helix 14 67 4.1E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APY29_RS08555 a024c63e8f21524339a261199477a731 116 SMART SM00530 12 68 8.2E-11 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APY29_RS08555 a024c63e8f21524339a261199477a731 116 Gene3D G3DSA:1.10.10.60 7 32 1.1E-9 T 28-03-2018 APY29_RS08555 a024c63e8f21524339a261199477a731 116 SUPERFAMILY SSF47413 4 75 2.67E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APY29_RS11700 bab5da67cd4f293e4c38522a6e49bd2a 65 Gene3D G3DSA:1.10.10.10 5 64 1.3E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS11700 bab5da67cd4f293e4c38522a6e49bd2a 65 Pfam PF12728 Helix-turn-helix domain 5 53 5.2E-18 T 28-03-2018 APY29_RS11700 bab5da67cd4f293e4c38522a6e49bd2a 65 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 5 52 7.6E-22 T 28-03-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 APY29_RS11700 bab5da67cd4f293e4c38522a6e49bd2a 65 SUPERFAMILY SSF46955 4 53 1.45E-10 T 28-03-2018 IPR009061 Putative DNA-binding domain APY29_RS21820 d56b09ac40938d73ad359d10ae6931e4 128 Pfam PF03203 MerC mercury resistance protein 9 118 5.3E-22 T 28-03-2018 IPR004891 MerC mercury resistance protein APY29_RS00240 4b5e0b6006777f8990027e0149f7c772 493 SUPERFAMILY SSF46548 7 158 4.66E-36 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 APY29_RS00240 4b5e0b6006777f8990027e0149f7c772 493 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 149 470 3.6E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS00240 4b5e0b6006777f8990027e0149f7c772 493 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 29 135 6.8E-36 T 28-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 APY29_RS00240 4b5e0b6006777f8990027e0149f7c772 493 Gene3D G3DSA:3.50.50.60 415 493 2.3E-8 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS00240 4b5e0b6006777f8990027e0149f7c772 493 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 7 483 2.6E-240 T 28-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 APY29_RS00240 4b5e0b6006777f8990027e0149f7c772 493 Gene3D G3DSA:3.50.50.60 239 322 2.6E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS00240 4b5e0b6006777f8990027e0149f7c772 493 Gene3D G3DSA:3.50.50.60 323 410 2.3E-14 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS00240 4b5e0b6006777f8990027e0149f7c772 493 SUPERFAMILY SSF51971 147 410 5.71E-66 T 28-03-2018 APY29_RS00240 4b5e0b6006777f8990027e0149f7c772 493 Gene3D G3DSA:3.40.50.720 163 238 4.9E-15 T 28-03-2018 APY29_RS00240 4b5e0b6006777f8990027e0149f7c772 493 Gene3D G3DSA:1.10.1060.10 2 140 3.4E-36 T 28-03-2018 APY29_RS00240 4b5e0b6006777f8990027e0149f7c772 493 PRINTS PR00419 Adrenodoxin reductase family signature 172 185 7.5E-29 T 28-03-2018 APY29_RS00240 4b5e0b6006777f8990027e0149f7c772 493 PRINTS PR00419 Adrenodoxin reductase family signature 333 346 7.5E-29 T 28-03-2018 APY29_RS00240 4b5e0b6006777f8990027e0149f7c772 493 PRINTS PR00419 Adrenodoxin reductase family signature 149 171 7.5E-29 T 28-03-2018 APY29_RS00240 4b5e0b6006777f8990027e0149f7c772 493 PRINTS PR00419 Adrenodoxin reductase family signature 299 313 7.5E-29 T 28-03-2018 APY29_RS00240 4b5e0b6006777f8990027e0149f7c772 493 Gene3D G3DSA:3.20.20.70 141 162 0.074 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS08295 1a01746878fc0b05615d29d1d2287069 511 Gene3D G3DSA:2.120.10.30 313 503 0.0036 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS08295 1a01746878fc0b05615d29d1d2287069 511 Gene3D G3DSA:2.120.10.30 151 312 0.0033 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS08295 1a01746878fc0b05615d29d1d2287069 511 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 8 29 1.3E-5 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APY29_RS08295 1a01746878fc0b05615d29d1d2287069 511 Pfam PF05787 Bacterial protein of unknown function (DUF839) 51 497 9.2E-88 T 28-03-2018 IPR008557 Protein of unknown function DUF839 APY29_RS02320 64246b0ade979580f6b79e5b0a54d696 220 Pfam PF11769 Protein of unknown function (DUF3313) 19 215 7.7E-46 T 28-03-2018 IPR021747 Protein of unknown function DUF3313 APY29_RS22860 35cff485f7472c94f069b7bb16b86146 243 Gene3D G3DSA:3.20.20.70 8 235 2.4E-53 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS22860 35cff485f7472c94f069b7bb16b86146 243 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 14 231 1.6E-66 T 28-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APY29_RS22860 35cff485f7472c94f069b7bb16b86146 243 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 13 229 1.6E-39 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APY29_RS22860 35cff485f7472c94f069b7bb16b86146 243 SUPERFAMILY SSF51366 12 234 1.04E-59 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APY29_RS22860 35cff485f7472c94f069b7bb16b86146 243 SMART SM00934 13 230 1.4E-71 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APY29_RS22860 35cff485f7472c94f069b7bb16b86146 243 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 66 79 - T 28-03-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APY29_RS22860 35cff485f7472c94f069b7bb16b86146 243 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 11 235 32.028 T 28-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APY29_RS10165 0b0f23d904c0ce60e61ab79ece057714 203 PIRSF PIRSF000349 1 203 1.8E-82 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS10165 0b0f23d904c0ce60e61ab79ece057714 203 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 2.4E-34 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS10165 0b0f23d904c0ce60e61ab79ece057714 203 SUPERFAMILY SSF54719 88 201 5.11E-46 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS10165 0b0f23d904c0ce60e61ab79ece057714 203 SUPERFAMILY SSF46609 1 90 1.23E-37 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS10165 0b0f23d904c0ce60e61ab79ece057714 203 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 28-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS10165 0b0f23d904c0ce60e61ab79ece057714 203 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 5.7E-28 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS10165 0b0f23d904c0ce60e61ab79ece057714 203 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 5.7E-28 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS10165 0b0f23d904c0ce60e61ab79ece057714 203 PRINTS PR01703 Manganese superoxide dismutase signature 125 133 5.7E-28 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS10165 0b0f23d904c0ce60e61ab79ece057714 203 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 5.7E-28 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS10165 0b0f23d904c0ce60e61ab79ece057714 203 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 5.7E-28 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS10165 0b0f23d904c0ce60e61ab79ece057714 203 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 197 8.7E-40 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 APY29_RS10165 0b0f23d904c0ce60e61ab79ece057714 203 Gene3D G3DSA:1.10.287.990 20 89 1.3E-30 T 28-03-2018 APY29_RS07730 fb77f411ab3328048fb7c5e740c257bc 144 Pfam PF02566 OsmC-like protein 36 128 1.5E-16 T 28-03-2018 IPR003718 OsmC/Ohr family APY29_RS07730 fb77f411ab3328048fb7c5e740c257bc 144 SUPERFAMILY SSF82784 9 130 1.44E-31 T 28-03-2018 IPR003718 OsmC/Ohr family APY29_RS07730 fb77f411ab3328048fb7c5e740c257bc 144 Gene3D G3DSA:3.30.300.20 6 134 2.0E-29 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta APY29_RS16080 0c53ffcf96e6b6dda54fe12e11eb9994 833 Pfam PF00270 DEAD/DEAH box helicase 28 214 4.1E-23 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APY29_RS16080 0c53ffcf96e6b6dda54fe12e11eb9994 833 SMART SM00490 293 375 3.6E-15 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS16080 0c53ffcf96e6b6dda54fe12e11eb9994 833 Pfam PF08494 DEAD/H associated 612 799 4.9E-48 T 28-03-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 APY29_RS16080 0c53ffcf96e6b6dda54fe12e11eb9994 833 PIRSF PIRSF037307 6 831 1.0E-138 T 28-03-2018 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 APY29_RS16080 0c53ffcf96e6b6dda54fe12e11eb9994 833 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 15 828 0.0 T 28-03-2018 IPR026362 DEXH box helicase, DNA ligase-associated APY29_RS16080 0c53ffcf96e6b6dda54fe12e11eb9994 833 Gene3D G3DSA:3.40.50.300 2 233 2.9E-29 T 28-03-2018 APY29_RS16080 0c53ffcf96e6b6dda54fe12e11eb9994 833 SMART SM00487 22 244 5.7E-25 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APY29_RS16080 0c53ffcf96e6b6dda54fe12e11eb9994 833 SUPERFAMILY SSF52540 244 385 1.41E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS16080 0c53ffcf96e6b6dda54fe12e11eb9994 833 SUPERFAMILY SSF52540 33 216 1.41E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS16080 0c53ffcf96e6b6dda54fe12e11eb9994 833 Pfam PF00271 Helicase conserved C-terminal domain 266 371 4.5E-12 T 28-03-2018 IPR001650 Helicase, C-terminal APY29_RS16080 0c53ffcf96e6b6dda54fe12e11eb9994 833 Gene3D G3DSA:3.40.50.300 258 400 4.8E-23 T 28-03-2018 APY29_RS06020 b2b632b815ccd58177b8b59d573bca7f 252 Gene3D G3DSA:3.40.50.1000 19 252 8.6E-23 T 28-03-2018 IPR023214 HAD-like domain APY29_RS06020 b2b632b815ccd58177b8b59d573bca7f 252 SUPERFAMILY SSF56784 19 247 1.03E-39 T 28-03-2018 IPR023214 HAD-like domain APY29_RS06020 b2b632b815ccd58177b8b59d573bca7f 252 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 19 247 2.3E-38 T 28-03-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 APY29_RS06020 b2b632b815ccd58177b8b59d573bca7f 252 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 20 208 7.8E-18 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 APY29_RS06020 b2b632b815ccd58177b8b59d573bca7f 252 Pfam PF02358 Trehalose-phosphatase 21 226 3.6E-34 T 28-03-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 APY29_RS09440 d09c7d4070574eb472d82ca552dd80a2 781 Gene3D G3DSA:3.40.50.1820 506 765 6.6E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS09440 d09c7d4070574eb472d82ca552dd80a2 781 SUPERFAMILY SSF53474 520 763 2.91E-42 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS09440 d09c7d4070574eb472d82ca552dd80a2 781 Gene3D G3DSA:2.140.10.30 47 505 2.2E-54 T 28-03-2018 APY29_RS09440 d09c7d4070574eb472d82ca552dd80a2 781 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 180 483 6.0E-46 T 28-03-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 APY29_RS09440 d09c7d4070574eb472d82ca552dd80a2 781 Pfam PF00326 Prolyl oligopeptidase family 565 762 2.6E-43 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APY29_RS09440 d09c7d4070574eb472d82ca552dd80a2 781 SUPERFAMILY SSF82171 179 512 1.09E-34 T 28-03-2018 APY29_RS13125 5eb6018df9c06f1bc91be8ae449a51d4 790 Gene3D G3DSA:3.30.450.20 250 395 1.2E-12 T 28-03-2018 APY29_RS13125 5eb6018df9c06f1bc91be8ae449a51d4 790 Gene3D G3DSA:1.10.287.1060 457 545 0.04 T 28-03-2018 APY29_RS13125 5eb6018df9c06f1bc91be8ae449a51d4 790 Gene3D G3DSA:1.10.287.950 546 738 8.2E-48 T 28-03-2018 APY29_RS13125 5eb6018df9c06f1bc91be8ae449a51d4 790 SUPERFAMILY SSF58104 454 735 3.01E-70 T 28-03-2018 APY29_RS13125 5eb6018df9c06f1bc91be8ae449a51d4 790 SUPERFAMILY SSF55785 255 382 2.44E-8 T 28-03-2018 IPR000014 PAS domain APY29_RS13125 5eb6018df9c06f1bc91be8ae449a51d4 790 SMART SM00283 487 734 5.5E-88 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS13125 5eb6018df9c06f1bc91be8ae449a51d4 790 Gene3D G3DSA:1.10.287.1060 107 183 0.061 T 28-03-2018 APY29_RS13125 5eb6018df9c06f1bc91be8ae449a51d4 790 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 547 701 1.4E-52 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS08240 1051dde505f01db9877e66373730f3c5 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 3.6E-11 T 28-03-2018 IPR024442 Transposase, zinc-ribbon APY29_RS08240 1051dde505f01db9877e66373730f3c5 320 SMART SM01126 137 285 4.9E-50 T 28-03-2018 IPR024445 ISXO2-like transposase domain APY29_RS08240 1051dde505f01db9877e66373730f3c5 320 Pfam PF12762 ISXO2-like transposase domain 137 285 2.2E-32 T 28-03-2018 IPR024445 ISXO2-like transposase domain APY29_RS17515 768b0f141de8f9b1062691ad0c0f544a 249 SUPERFAMILY SSF56281 5 215 3.01E-27 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS17515 768b0f141de8f9b1062691ad0c0f544a 249 Pfam PF12706 Beta-lactamase superfamily domain 32 189 1.3E-13 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS17515 768b0f141de8f9b1062691ad0c0f544a 249 SMART SM00849 19 192 6.3E-4 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS17515 768b0f141de8f9b1062691ad0c0f544a 249 Gene3D G3DSA:3.60.15.10 2 240 2.7E-26 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS10590 57f091f3f81173b2bac35112d4fb8dd7 294 SUPERFAMILY SSF56317 7 291 6.28E-88 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APY29_RS10590 57f091f3f81173b2bac35112d4fb8dd7 294 Pfam PF00795 Carbon-nitrogen hydrolase 8 271 8.3E-57 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APY29_RS10590 57f091f3f81173b2bac35112d4fb8dd7 294 Gene3D G3DSA:3.60.110.10 2 294 7.9E-83 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APY29_RS09270 7ce66ecb4ce9326286d7c812da4ce876 178 PRINTS PR01171 Bacterial lipocalin signature 123 131 3.4E-7 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 APY29_RS09270 7ce66ecb4ce9326286d7c812da4ce876 178 PRINTS PR01171 Bacterial lipocalin signature 138 149 3.4E-7 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 APY29_RS09270 7ce66ecb4ce9326286d7c812da4ce876 178 PRINTS PR01171 Bacterial lipocalin signature 30 44 3.4E-7 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 APY29_RS09270 7ce66ecb4ce9326286d7c812da4ce876 178 PRINTS PR01171 Bacterial lipocalin signature 165 175 3.4E-7 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 APY29_RS09270 7ce66ecb4ce9326286d7c812da4ce876 178 ProSitePatterns PS00213 Lipocalin signature. 31 42 - T 28-03-2018 IPR022272 Lipocalin family conserved site APY29_RS09270 7ce66ecb4ce9326286d7c812da4ce876 178 PIRSF PIRSF036893 1 177 3.5E-62 T 28-03-2018 IPR022271 Lipocalin, ApoD type APY29_RS09270 7ce66ecb4ce9326286d7c812da4ce876 178 Pfam PF08212 Lipocalin-like domain 30 174 9.0E-54 T 28-03-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain APY29_RS09270 7ce66ecb4ce9326286d7c812da4ce876 178 Gene3D G3DSA:2.40.128.20 7 174 2.5E-36 T 28-03-2018 IPR012674 Calycin APY29_RS09270 7ce66ecb4ce9326286d7c812da4ce876 178 SUPERFAMILY SSF50814 21 172 3.74E-40 T 28-03-2018 IPR012674 Calycin APY29_RS08020 c5081c31fe362453557905b265f95350 480 SUPERFAMILY SSF81340 26 445 2.35E-90 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 APY29_RS08020 c5081c31fe362453557905b265f95350 480 Gene3D G3DSA:1.10.3080.10 32 445 1.4E-76 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 APY29_RS08020 c5081c31fe362453557905b265f95350 480 Pfam PF00654 Voltage gated chloride channel 88 431 3.6E-81 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 APY29_RS08020 c5081c31fe362453557905b265f95350 480 PRINTS PR00762 Chloride channel signature 381 397 1.6E-29 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 APY29_RS08020 c5081c31fe362453557905b265f95350 480 PRINTS PR00762 Chloride channel signature 399 418 1.6E-29 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 APY29_RS08020 c5081c31fe362453557905b265f95350 480 PRINTS PR00762 Chloride channel signature 185 204 1.6E-29 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 APY29_RS08020 c5081c31fe362453557905b265f95350 480 PRINTS PR00762 Chloride channel signature 352 372 1.6E-29 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 APY29_RS08020 c5081c31fe362453557905b265f95350 480 PRINTS PR00762 Chloride channel signature 133 152 1.6E-29 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 APY29_RS08020 c5081c31fe362453557905b265f95350 480 PRINTS PR00762 Chloride channel signature 99 116 1.6E-29 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 APY29_RS08200 6657761e0293cabfe06dd7a836212e8e 115 Pfam PF03466 LysR substrate binding domain 2 76 6.4E-12 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS08200 6657761e0293cabfe06dd7a836212e8e 115 SUPERFAMILY SSF53850 2 80 1.46E-14 T 28-03-2018 APY29_RS08200 6657761e0293cabfe06dd7a836212e8e 115 Gene3D G3DSA:3.40.190.10 1 44 4.9E-5 T 28-03-2018 APY29_RS13935 bcbf2c953acc012dc49fc4df796deeaa 330 SUPERFAMILY SSF52821 207 315 1.96E-21 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS13935 bcbf2c953acc012dc49fc4df796deeaa 330 Pfam PF00581 Rhodanese-like domain 224 306 5.5E-6 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS13935 bcbf2c953acc012dc49fc4df796deeaa 330 Gene3D G3DSA:3.40.250.10 205 315 5.5E-16 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS13935 bcbf2c953acc012dc49fc4df796deeaa 330 Pfam PF09335 SNARE associated Golgi protein 27 157 5.4E-14 T 28-03-2018 IPR032816 SNARE associated Golgi protein APY29_RS21925 a3f983a3450cd3a6656935c28cf2622f 538 PIRSF PIRSF001363 11 538 1.6E-230 T 28-03-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 APY29_RS21925 a3f983a3450cd3a6656935c28cf2622f 538 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 31 537 6.9E-217 T 28-03-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 APY29_RS21925 a3f983a3450cd3a6656935c28cf2622f 538 Pfam PF01274 Malate synthase 26 537 1.1E-194 T 28-03-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 APY29_RS21925 a3f983a3450cd3a6656935c28cf2622f 538 Gene3D G3DSA:3.20.20.360 82 421 1.8E-116 T 28-03-2018 APY29_RS21925 a3f983a3450cd3a6656935c28cf2622f 538 Gene3D G3DSA:1.20.1220.12 422 537 1.2E-41 T 28-03-2018 APY29_RS21925 a3f983a3450cd3a6656935c28cf2622f 538 SUPERFAMILY SSF51645 25 537 1.02E-182 T 28-03-2018 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 APY29_RS08515 f64298d709f9cd85d288aed2bc5eb11b 220 Pfam PF01738 Dienelactone hydrolase family 15 218 2.3E-36 T 28-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 APY29_RS08515 f64298d709f9cd85d288aed2bc5eb11b 220 SUPERFAMILY SSF53474 3 219 2.7E-35 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS08515 f64298d709f9cd85d288aed2bc5eb11b 220 Gene3D G3DSA:3.40.50.1820 4 220 1.1E-21 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS14695 05aac13d730529709d13907eb2740243 189 SUPERFAMILY SSF56371 6 126 1.83E-5 T 28-03-2018 IPR001574 Ribosome-inactivating protein GO:0017148|GO:0030598 APY29_RS14695 05aac13d730529709d13907eb2740243 189 Gene3D G3DSA:3.40.420.10 47 141 0.0012 T 28-03-2018 IPR016138 Ribosome-inactivating protein, subdomain 1 GO:0017148|GO:0030598 APY29_RS14695 05aac13d730529709d13907eb2740243 189 Pfam PF00161 Ribosome inactivating protein 48 127 1.7E-4 T 28-03-2018 IPR001574 Ribosome-inactivating protein GO:0017148|GO:0030598 APY29_RS03155 1d02a5bffd631d974daaf1ac6f604dad 402 Pfam PF00589 Phage integrase family 208 357 1.4E-10 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS03155 1d02a5bffd631d974daaf1ac6f604dad 402 SUPERFAMILY SSF56349 98 380 2.38E-54 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APY29_RS03155 1d02a5bffd631d974daaf1ac6f604dad 402 Gene3D G3DSA:1.10.150.130 87 202 1.8E-14 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal APY29_RS03155 1d02a5bffd631d974daaf1ac6f604dad 402 Gene3D G3DSA:1.10.443.10 203 386 3.7E-25 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS03155 1d02a5bffd631d974daaf1ac6f604dad 402 Pfam PF13356 Arm DNA-binding domain 2 84 5.5E-16 T 28-03-2018 IPR025166 Integrase, DNA-binding domain APY29_RS04945 1ee3d5ccd7f60f2845d90544e6e89441 218 Gene3D G3DSA:3.40.50.150 12 215 1.4E-33 T 28-03-2018 APY29_RS04945 1ee3d5ccd7f60f2845d90544e6e89441 218 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 9 174 5.1E-32 T 28-03-2018 APY29_RS04945 1ee3d5ccd7f60f2845d90544e6e89441 218 SUPERFAMILY SSF53335 3 180 3.07E-43 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS13355 ede54760ad0b9bfe5eb05dc967800eed 400 SUPERFAMILY SSF53383 3 390 2.42E-105 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS13355 ede54760ad0b9bfe5eb05dc967800eed 400 Gene3D G3DSA:3.90.1150.10 291 392 1.4E-29 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS13355 ede54760ad0b9bfe5eb05dc967800eed 400 Gene3D G3DSA:3.40.640.10 46 290 8.3E-47 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS13355 ede54760ad0b9bfe5eb05dc967800eed 400 Pfam PF00155 Aminotransferase class I and II 44 381 6.3E-31 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APY29_RS12480 67d7fc7d3b546597dc977c4f9224d612 406 Pfam PF03453 MoeA N-terminal region (domain I and II) 10 170 1.4E-40 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 APY29_RS12480 67d7fc7d3b546597dc977c4f9224d612 406 SMART SM00852 183 320 3.5E-39 T 28-03-2018 IPR001453 MoaB/Mog domain APY29_RS12480 67d7fc7d3b546597dc977c4f9224d612 406 Gene3D G3DSA:2.40.340.10 332 406 2.6E-18 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 APY29_RS12480 67d7fc7d3b546597dc977c4f9224d612 406 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 310 4.5E-31 T 28-03-2018 IPR001453 MoaB/Mog domain APY29_RS12480 67d7fc7d3b546597dc977c4f9224d612 406 Gene3D G3DSA:2.170.190.11 64 144 8.4E-27 T 28-03-2018 APY29_RS12480 67d7fc7d3b546597dc977c4f9224d612 406 SUPERFAMILY SSF63867 327 404 1.57E-19 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 APY29_RS12480 67d7fc7d3b546597dc977c4f9224d612 406 SUPERFAMILY SSF53218 180 324 2.36E-41 T 28-03-2018 IPR001453 MoaB/Mog domain APY29_RS12480 67d7fc7d3b546597dc977c4f9224d612 406 Gene3D G3DSA:3.90.105.10 28 63 1.2E-9 T 28-03-2018 APY29_RS12480 67d7fc7d3b546597dc977c4f9224d612 406 Pfam PF03454 MoeA C-terminal region (domain IV) 333 403 3.1E-16 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 APY29_RS12480 67d7fc7d3b546597dc977c4f9224d612 406 Pfam PF00994 Probable molybdopterin binding domain 183 318 4.7E-27 T 28-03-2018 IPR001453 MoaB/Mog domain APY29_RS12480 67d7fc7d3b546597dc977c4f9224d612 406 SUPERFAMILY SSF63882 5 179 1.02E-48 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 APY29_RS12480 67d7fc7d3b546597dc977c4f9224d612 406 Gene3D G3DSA:3.40.980.10 153 327 2.5E-53 T 28-03-2018 IPR001453 MoaB/Mog domain APY29_RS19545 c2413af84b857b5b1216673dc833a826 245 SUPERFAMILY SSF51735 5 242 6.47E-70 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS19545 c2413af84b857b5b1216673dc833a826 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 8.8E-54 T 28-03-2018 APY29_RS19545 c2413af84b857b5b1216673dc833a826 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.2E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS19545 c2413af84b857b5b1216673dc833a826 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.2E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS19545 c2413af84b857b5b1216673dc833a826 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.2E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS19545 c2413af84b857b5b1216673dc833a826 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.2E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS19545 c2413af84b857b5b1216673dc833a826 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.2E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS19545 c2413af84b857b5b1216673dc833a826 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.2E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS19545 c2413af84b857b5b1216673dc833a826 245 Gene3D G3DSA:3.40.50.720 3 245 2.9E-61 T 28-03-2018 APY29_RS19545 c2413af84b857b5b1216673dc833a826 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.1E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS19545 c2413af84b857b5b1216673dc833a826 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.1E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS19545 c2413af84b857b5b1216673dc833a826 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.1E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS19545 c2413af84b857b5b1216673dc833a826 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APY29_RS07595 1ae0e662ced9906d6a9e1dce15e0e9c0 293 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 275 2.6E-48 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 APY29_RS07595 1ae0e662ced9906d6a9e1dce15e0e9c0 293 Pfam PF02567 Phenazine biosynthesis-like protein 9 271 4.5E-50 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 APY29_RS07595 1ae0e662ced9906d6a9e1dce15e0e9c0 293 PIRSF PIRSF016184 1 292 4.7E-69 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 APY29_RS07595 1ae0e662ced9906d6a9e1dce15e0e9c0 293 Gene3D G3DSA:3.10.310.10 129 281 1.6E-29 T 28-03-2018 APY29_RS07595 1ae0e662ced9906d6a9e1dce15e0e9c0 293 Gene3D G3DSA:3.10.310.10 1 128 2.6E-27 T 28-03-2018 APY29_RS07595 1ae0e662ced9906d6a9e1dce15e0e9c0 293 SUPERFAMILY SSF54506 4 290 1.74E-62 T 28-03-2018 APY29_RS10260 f32ee4f84e6807340794d36de6067196 162 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 8 141 2.0E-30 T 28-03-2018 APY29_RS10260 f32ee4f84e6807340794d36de6067196 162 SUPERFAMILY SSF50475 6 135 3.49E-24 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 APY29_RS10260 f32ee4f84e6807340794d36de6067196 162 Gene3D G3DSA:2.30.110.10 1 146 1.7E-18 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 APY29_RS06090 5e1dac0ac27044dfc528b6b5174c832e 275 SMART SM00382 34 208 1.2E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS06090 5e1dac0ac27044dfc528b6b5174c832e 275 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS06090 5e1dac0ac27044dfc528b6b5174c832e 275 Pfam PF00005 ABC transporter 25 158 1.5E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS06090 5e1dac0ac27044dfc528b6b5174c832e 275 SUPERFAMILY SSF52540 10 209 2.11E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS06090 5e1dac0ac27044dfc528b6b5174c832e 275 Gene3D G3DSA:3.40.50.300 9 211 2.6E-57 T 28-03-2018 APY29_RS00590 4857ff064a91b0f048d1746207a24bf8 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.0E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS00590 4857ff064a91b0f048d1746207a24bf8 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.0E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS00590 4857ff064a91b0f048d1746207a24bf8 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.0E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS00590 4857ff064a91b0f048d1746207a24bf8 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 1.6E-17 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS00590 4857ff064a91b0f048d1746207a24bf8 210 Gene3D G3DSA:1.10.10.10 122 210 2.8E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS00590 4857ff064a91b0f048d1746207a24bf8 210 SMART SM00421 147 204 3.5E-22 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APY29_RS00590 4857ff064a91b0f048d1746207a24bf8 210 Pfam PF00072 Response regulator receiver domain 6 117 3.4E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS00590 4857ff064a91b0f048d1746207a24bf8 210 SMART SM00448 4 116 5.9E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS00590 4857ff064a91b0f048d1746207a24bf8 210 SUPERFAMILY SSF52172 1 178 1.25E-34 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS00590 4857ff064a91b0f048d1746207a24bf8 210 Gene3D G3DSA:3.40.50.2300 1 121 2.5E-34 T 28-03-2018 APY29_RS04310 c5370474c2b6670d05d7cf7a48766e8c 419 Pfam PF06738 Putative threonine/serine exporter 21 263 6.2E-53 T 28-03-2018 IPR010619 Putative threonine/serine exporter APY29_RS04310 c5370474c2b6670d05d7cf7a48766e8c 419 Pfam PF12821 Threonine/Serine exporter, ThrE 289 409 2.2E-12 T 28-03-2018 IPR024528 Threonine/Serine exporter, ThrE APY29_RS19675 ba55e9d79020f24431348112f275040f 379 SUPERFAMILY SSF53955 70 373 9.37E-84 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS19675 ba55e9d79020f24431348112f275040f 379 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 70 371 9.8E-126 T 28-03-2018 IPR011757 Lytic transglycosylase MltB APY29_RS19675 ba55e9d79020f24431348112f275040f 379 Gene3D G3DSA:1.10.530.10 250 376 4.1E-29 T 28-03-2018 APY29_RS19675 ba55e9d79020f24431348112f275040f 379 Gene3D G3DSA:1.10.8.350 64 129 5.2E-6 T 28-03-2018 APY29_RS19675 ba55e9d79020f24431348112f275040f 379 Gene3D G3DSA:1.10.8.350 130 246 7.5E-33 T 28-03-2018 APY29_RS19675 ba55e9d79020f24431348112f275040f 379 Pfam PF13406 Transglycosylase SLT domain 68 369 1.4E-91 T 28-03-2018 IPR031304 Transglycosylase SLT domain 2 APY29_RS04785 a1f890b2df74a51d9fc444d756acde5c 226 Gene3D G3DSA:3.40.50.880 1 226 1.9E-64 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS04785 a1f890b2df74a51d9fc444d756acde5c 226 Pfam PF01965 DJ-1/PfpI family 25 221 3.9E-15 T 28-03-2018 IPR002818 DJ-1/PfpI APY29_RS04785 a1f890b2df74a51d9fc444d756acde5c 226 SUPERFAMILY SSF52317 1 222 5.5E-77 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS14530 3e50eacbeb1e34f34087d409f9484250 234 Gene3D G3DSA:3.40.1410.10 81 230 1.9E-27 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APY29_RS14530 3e50eacbeb1e34f34087d409f9484250 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 24 38 2.2E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS14530 3e50eacbeb1e34f34087d409f9484250 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 54 2.2E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS14530 3e50eacbeb1e34f34087d409f9484250 234 SUPERFAMILY SSF64288 52 229 2.98E-32 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APY29_RS14530 3e50eacbeb1e34f34087d409f9484250 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 64 5.9E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS14530 3e50eacbeb1e34f34087d409f9484250 234 Pfam PF07702 UTRA domain 88 223 1.6E-26 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APY29_RS14530 3e50eacbeb1e34f34087d409f9484250 234 Gene3D G3DSA:1.10.10.10 1 66 1.1E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS14530 3e50eacbeb1e34f34087d409f9484250 234 SUPERFAMILY SSF46785 1 68 3.11E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS14530 3e50eacbeb1e34f34087d409f9484250 234 SMART SM00866 87 224 1.5E-24 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APY29_RS14530 3e50eacbeb1e34f34087d409f9484250 234 SMART SM00345 5 64 1.0E-17 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APY29_RS14530 3e50eacbeb1e34f34087d409f9484250 234 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 1 231 2.9E-93 T 28-03-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 APY29_RS15365 bd360dd6bc7fb589ca8f7bdfa1bc9453 184 Pfam PF03358 NADPH-dependent FMN reductase 5 148 5.8E-39 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APY29_RS15365 bd360dd6bc7fb589ca8f7bdfa1bc9453 184 SUPERFAMILY SSF52218 5 175 2.18E-48 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS15365 bd360dd6bc7fb589ca8f7bdfa1bc9453 184 Gene3D G3DSA:3.40.50.360 2 184 3.6E-36 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS11825 a210b014cdcf5255d721391a80ba4cce 248 SUPERFAMILY SSF52821 103 233 3.27E-24 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS11825 a210b014cdcf5255d721391a80ba4cce 248 Gene3D G3DSA:3.40.250.10 105 221 2.1E-20 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS11825 a210b014cdcf5255d721391a80ba4cce 248 SMART SM00450 117 218 4.2E-12 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS11825 a210b014cdcf5255d721391a80ba4cce 248 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 244 33.359 T 28-03-2018 IPR020936 Uncharacterised protein family UPF0176 APY29_RS11825 a210b014cdcf5255d721391a80ba4cce 248 Pfam PF00581 Rhodanese-like domain 118 212 2.2E-5 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS05695 92352b30caeae14279c4260594bea5d6 654 Pfam PF10566 Glycoside hydrolase 97 289 558 4.1E-102 T 28-03-2018 IPR019563 Glycosyl-hydrolase 97, catalytic domain APY29_RS05695 92352b30caeae14279c4260594bea5d6 654 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 30 285 8.0E-58 T 28-03-2018 IPR029486 Glycosyl-hydrolase 97, N-terminal domain APY29_RS05695 92352b30caeae14279c4260594bea5d6 654 Gene3D G3DSA:2.70.98.10 27 281 3.1E-67 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 APY29_RS05695 92352b30caeae14279c4260594bea5d6 654 Gene3D G3DSA:2.60.40.1180 562 652 5.7E-31 T 28-03-2018 APY29_RS05695 92352b30caeae14279c4260594bea5d6 654 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 561 651 1.3E-30 T 28-03-2018 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain APY29_RS05695 92352b30caeae14279c4260594bea5d6 654 SUPERFAMILY SSF51445 289 534 4.63E-22 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS05695 92352b30caeae14279c4260594bea5d6 654 Gene3D G3DSA:3.20.20.70 282 561 2.7E-85 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS20270 9852df595251e212e3a5054a3d4f1cc5 178 SUPERFAMILY SSF46785 34 127 2.73E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS20270 9852df595251e212e3a5054a3d4f1cc5 178 Pfam PF03551 Transcriptional regulator PadR-like family 39 107 2.8E-18 T 28-03-2018 IPR005149 Transcription regulator PadR, N-terminal APY29_RS20270 9852df595251e212e3a5054a3d4f1cc5 178 Gene3D G3DSA:1.10.10.10 25 132 1.1E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS23220 1ac7231b3398856cd0748054c005830e 526 Pfam PF02646 RmuC family 214 502 6.9E-76 T 28-03-2018 IPR003798 DNA recombination RmuC APY29_RS23220 1ac7231b3398856cd0748054c005830e 526 Gene3D G3DSA:1.20.1480.30 426 512 0.047 T 28-03-2018 APY29_RS23220 1ac7231b3398856cd0748054c005830e 526 Gene3D G3DSA:1.20.120.20 112 251 5.4E-6 T 28-03-2018 APY29_RS10615 f69442f5e93996288463480aa369c3ef 227 Pfam PF02224 Cytidylate kinase 9 219 4.4E-68 T 28-03-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 APY29_RS10615 f69442f5e93996288463480aa369c3ef 227 Gene3D G3DSA:3.40.50.300 5 223 5.7E-44 T 28-03-2018 APY29_RS10615 f69442f5e93996288463480aa369c3ef 227 SUPERFAMILY SSF52540 6 223 1.31E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS10615 f69442f5e93996288463480aa369c3ef 227 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 218 1.3E-67 T 28-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 APY29_RS10615 f69442f5e93996288463480aa369c3ef 227 Hamap MF_00238 Cytidylate kinase [cmk]. 6 225 33.093 T 28-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 APY29_RS22975 c5c65b6ad9d2f1c0177c97e9eec5ce0e 128 Gene3D G3DSA:3.10.450.50 7 128 5.6E-39 T 28-03-2018 APY29_RS22975 c5c65b6ad9d2f1c0177c97e9eec5ce0e 128 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 5 128 29.482 T 28-03-2018 IPR023006 Uncharacterised protein family UPF0225 APY29_RS22975 c5c65b6ad9d2f1c0177c97e9eec5ce0e 128 SUPERFAMILY SSF54427 28 127 3.63E-28 T 28-03-2018 IPR032710 NTF2-like domain APY29_RS22975 c5c65b6ad9d2f1c0177c97e9eec5ce0e 128 Pfam PF02810 SEC-C motif 7 23 7.8E-5 T 28-03-2018 IPR004027 SEC-C motif APY29_RS00300 03bd234a7d7764ee863ffbe4a31bd44d 372 SUPERFAMILY SSF53756 1 356 1.62E-99 T 28-03-2018 APY29_RS00300 03bd234a7d7764ee863ffbe4a31bd44d 372 Gene3D G3DSA:3.40.50.2000 1 202 7.2E-76 T 28-03-2018 APY29_RS00300 03bd234a7d7764ee863ffbe4a31bd44d 372 Gene3D G3DSA:3.40.50.2000 203 340 2.6E-17 T 28-03-2018 APY29_RS00300 03bd234a7d7764ee863ffbe4a31bd44d 372 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 27 355 3.9E-100 T 28-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 APY29_RS00300 03bd234a7d7764ee863ffbe4a31bd44d 372 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 356 4.5E-102 T 28-03-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 APY29_RS05145 66d3eabdb96247376b6ac9c144080475 167 SUPERFAMILY SSF55298 30 167 3.61E-23 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APY29_RS05145 66d3eabdb96247376b6ac9c144080475 167 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 141 160 - T 28-03-2018 IPR019897 RidA, conserved site APY29_RS05145 66d3eabdb96247376b6ac9c144080475 167 Gene3D G3DSA:3.30.1330.40 21 167 1.0E-23 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APY29_RS05145 66d3eabdb96247376b6ac9c144080475 167 Pfam PF01042 Endoribonuclease L-PSP 50 165 4.5E-16 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family APY29_RS03515 542600ddd331b7b0a86f71eef32a9d10 531 PIRSF PIRSF006060 1 465 1.6E-71 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APY29_RS03515 542600ddd331b7b0a86f71eef32a9d10 531 PIRSF PIRSF006060 450 517 75.0 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APY29_RS03515 542600ddd331b7b0a86f71eef32a9d10 531 Pfam PF13520 Amino acid permease 13 423 1.5E-39 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APY29_RS17185 c0658a01105d7fe24080d924b5956047 596 Pfam PF10592 AIPR protein 241 465 8.5E-39 T 28-03-2018 IPR018891 Abortive bacteriophage infection, resistance APY29_RS21175 45ab8d3317cc25ebfd8885e6bc923dbf 243 SUPERFAMILY SSF53271 66 242 4.2E-32 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like APY29_RS21175 45ab8d3317cc25ebfd8885e6bc923dbf 243 Gene3D G3DSA:3.40.50.2020 76 243 1.4E-30 T 28-03-2018 APY29_RS21175 45ab8d3317cc25ebfd8885e6bc923dbf 243 Pfam PF00156 Phosphoribosyl transferase domain 153 238 3.1E-7 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 APY29_RS10025 146137e4144cef343a2db409e00596e7 581 Gene3D G3DSA:3.90.1580.10 300 581 5.1E-70 T 28-03-2018 APY29_RS10025 146137e4144cef343a2db409e00596e7 581 SUPERFAMILY SSF56436 305 580 5.42E-66 T 28-03-2018 IPR016187 C-type lectin fold APY29_RS10025 146137e4144cef343a2db409e00596e7 581 Pfam PF03781 Sulfatase-modifying factor enzyme 1 306 579 3.2E-67 T 28-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 APY29_RS10025 146137e4144cef343a2db409e00596e7 581 Gene3D G3DSA:1.25.40.10 146 237 0.0052 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS22720 d3cc0698d94a95fa70331f01a62786ac 472 SUPERFAMILY SSF51556 8 471 3.74E-157 T 28-03-2018 IPR032466 Metal-dependent hydrolase APY29_RS22720 d3cc0698d94a95fa70331f01a62786ac 472 Pfam PF02614 Glucuronate isomerase 22 466 3.8E-71 T 28-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 APY29_RS22720 d3cc0698d94a95fa70331f01a62786ac 472 Gene3D G3DSA:3.20.20.140 6 102 6.1E-26 T 28-03-2018 APY29_RS22720 d3cc0698d94a95fa70331f01a62786ac 472 Hamap MF_00675 Uronate isomerase [uxaC]. 5 472 40.042 T 28-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 APY29_RS22720 d3cc0698d94a95fa70331f01a62786ac 472 Gene3D G3DSA:3.20.20.140 103 472 7.8E-125 T 28-03-2018 APY29_RS22420 c5cb681b89ff0ab534c2a70cf37b2cca 137 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 2 129 5.7E-23 T 28-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 Pfam PF00575 S1 RNA binding domain 18 87 1.2E-4 T 28-03-2018 IPR003029 S1 domain GO:0003676 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 Pfam PF00575 S1 RNA binding domain 104 172 1.8E-10 T 28-03-2018 IPR003029 S1 domain GO:0003676 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 Pfam PF00575 S1 RNA binding domain 362 435 1.1E-19 T 28-03-2018 IPR003029 S1 domain GO:0003676 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 Pfam PF00575 S1 RNA binding domain 451 521 5.6E-13 T 28-03-2018 IPR003029 S1 domain GO:0003676 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 Pfam PF00575 S1 RNA binding domain 277 348 1.3E-22 T 28-03-2018 IPR003029 S1 domain GO:0003676 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 Pfam PF00575 S1 RNA binding domain 189 261 1.5E-22 T 28-03-2018 IPR003029 S1 domain GO:0003676 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 Gene3D G3DSA:2.40.50.140 97 178 2.7E-8 T 28-03-2018 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 Gene3D G3DSA:2.40.50.140 183 267 1.5E-26 T 28-03-2018 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 SUPERFAMILY SSF50249 256 364 1.19E-28 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 22 40 1.6E-86 T 28-03-2018 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 109 125 1.6E-86 T 28-03-2018 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 331 349 1.6E-86 T 28-03-2018 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 291 310 1.6E-86 T 28-03-2018 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 127 144 1.6E-86 T 28-03-2018 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 40 54 1.6E-86 T 28-03-2018 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 85 104 1.6E-86 T 28-03-2018 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 156 176 1.6E-86 T 28-03-2018 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 213 234 1.6E-86 T 28-03-2018 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 SUPERFAMILY SSF50249 1 113 2.09E-21 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 PIRSF PIRSF002111 1 535 1.9E-213 T 28-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 SUPERFAMILY SSF50249 345 441 6.04E-22 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 Gene3D G3DSA:2.40.50.140 2 93 3.8E-10 T 28-03-2018 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 SUPERFAMILY SSF50249 104 186 2.24E-14 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 SUPERFAMILY SSF50249 431 537 3.88E-20 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 SUPERFAMILY SSF50249 191 277 4.62E-27 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 Gene3D G3DSA:2.40.50.140 276 349 1.7E-27 T 28-03-2018 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 SMART SM00316 363 435 1.1E-20 T 28-03-2018 IPR022967 RNA-binding domain, S1 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 SMART SM00316 191 261 1.3E-28 T 28-03-2018 IPR022967 RNA-binding domain, S1 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 SMART SM00316 104 172 7.1E-9 T 28-03-2018 IPR022967 RNA-binding domain, S1 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 SMART SM00316 20 88 5.7E-6 T 28-03-2018 IPR022967 RNA-binding domain, S1 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 SMART SM00316 276 348 1.2E-27 T 28-03-2018 IPR022967 RNA-binding domain, S1 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 SMART SM00316 450 521 5.4E-16 T 28-03-2018 IPR022967 RNA-binding domain, S1 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 Gene3D G3DSA:2.40.50.140 454 547 1.3E-17 T 28-03-2018 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 Gene3D G3DSA:2.40.50.140 365 453 4.1E-21 T 28-03-2018 APY29_RS10620 445f1b0a2ca5d64761d6291022b17598 561 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 521 1.9E-209 T 28-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APY29_RS15770 63d489e77358b8a57352074952168e74 120 Gene3D G3DSA:1.10.10.10 7 110 1.2E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS15770 63d489e77358b8a57352074952168e74 120 SUPERFAMILY SSF46785 20 117 3.04E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS15770 63d489e77358b8a57352074952168e74 120 Pfam PF03551 Transcriptional regulator PadR-like family 24 98 2.4E-19 T 28-03-2018 IPR005149 Transcription regulator PadR, N-terminal APY29_RS11730 5764c722988132236360471f3b19f3cf 1038 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 454 460 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APY29_RS11730 5764c722988132236360471f3b19f3cf 1038 SUPERFAMILY SSF53335 2 16 1.77E-38 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS11730 5764c722988132236360471f3b19f3cf 1038 SUPERFAMILY SSF53335 243 297 1.77E-38 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS11730 5764c722988132236360471f3b19f3cf 1038 SUPERFAMILY SSF53335 126 206 1.77E-38 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS11730 5764c722988132236360471f3b19f3cf 1038 SUPERFAMILY SSF53335 449 539 1.77E-38 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS11730 5764c722988132236360471f3b19f3cf 1038 Gene3D G3DSA:3.40.50.150 133 728 3.0E-32 T 28-03-2018 APY29_RS11730 5764c722988132236360471f3b19f3cf 1038 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 182 196 3.6E-10 T 28-03-2018 APY29_RS11730 5764c722988132236360471f3b19f3cf 1038 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 135 151 3.6E-10 T 28-03-2018 APY29_RS11730 5764c722988132236360471f3b19f3cf 1038 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 451 463 3.6E-10 T 28-03-2018 APY29_RS21240 c890b30fdce96d36f5235f63e3f76a1d 226 Pfam PF10677 Protein of unknown function (DUF2490) 29 214 9.6E-46 T 28-03-2018 IPR019619 Protein of unknown function DUF2490 APY29_RS21240 c890b30fdce96d36f5235f63e3f76a1d 226 Gene3D G3DSA:2.40.160.10 21 226 1.4E-4 T 28-03-2018 APY29_RS07880 af47ee965ca9cf5f633b57418655db85 203 SUPERFAMILY SSF55729 22 177 4.56E-16 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS07880 af47ee965ca9cf5f633b57418655db85 203 Gene3D G3DSA:3.40.630.30 21 199 1.2E-17 T 28-03-2018 APY29_RS18830 466987bd7a32cf088695fb3d1c921a43 432 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 13 86 3.9E-25 T 28-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 APY29_RS18830 466987bd7a32cf088695fb3d1c921a43 432 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 209 428 4.2E-75 T 28-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 APY29_RS18830 466987bd7a32cf088695fb3d1c921a43 432 Pfam PF07670 Nucleoside recognition 98 197 2.0E-7 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 APY29_RS14385 9697d501c4aee3f32b395543609b1a1e 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 3.2E-51 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14385 9697d501c4aee3f32b395543609b1a1e 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 627 640 3.2E-51 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14385 9697d501c4aee3f32b395543609b1a1e 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 3.2E-51 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14385 9697d501c4aee3f32b395543609b1a1e 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 3.2E-51 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14385 9697d501c4aee3f32b395543609b1a1e 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 3.2E-51 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14385 9697d501c4aee3f32b395543609b1a1e 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 3.2E-51 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14385 9697d501c4aee3f32b395543609b1a1e 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 3.2E-51 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14385 9697d501c4aee3f32b395543609b1a1e 662 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 636 5.9E-217 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14385 9697d501c4aee3f32b395543609b1a1e 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 9.0E-90 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14385 9697d501c4aee3f32b395543609b1a1e 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 9.0E-90 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14385 9697d501c4aee3f32b395543609b1a1e 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 9.0E-90 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14385 9697d501c4aee3f32b395543609b1a1e 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 9.0E-90 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14385 9697d501c4aee3f32b395543609b1a1e 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 9.0E-90 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14385 9697d501c4aee3f32b395543609b1a1e 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 9.0E-90 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14385 9697d501c4aee3f32b395543609b1a1e 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 9.0E-90 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14385 9697d501c4aee3f32b395543609b1a1e 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 9.0E-90 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14385 9697d501c4aee3f32b395543609b1a1e 662 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 634 4.7E-114 T 28-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal APY29_RS14385 9697d501c4aee3f32b395543609b1a1e 662 Pfam PF01578 Cytochrome C assembly protein 89 295 1.0E-51 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 Gene3D G3DSA:3.30.390.30 345 456 1.9E-37 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.4E-31 T 28-03-2018 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 1.4E-31 T 28-03-2018 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 189 1.4E-31 T 28-03-2018 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 1.4E-31 T 28-03-2018 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 1.4E-31 T 28-03-2018 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 SUPERFAMILY SSF51905 7 373 1.08E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 455 3.4E-33 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 Gene3D G3DSA:3.40.50.720 166 334 1.3E-30 T 28-03-2018 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 Gene3D G3DSA:3.50.50.60 1 161 6.3E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 2.4E-68 T 28-03-2018 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 2.4E-68 T 28-03-2018 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 171 196 2.4E-68 T 28-03-2018 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.4E-68 T 28-03-2018 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 2.4E-68 T 28-03-2018 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 2.4E-68 T 28-03-2018 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 2.4E-68 T 28-03-2018 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.4E-68 T 28-03-2018 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 2.4E-68 T 28-03-2018 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 PIRSF PIRSF000350 1 455 1.0E-74 T 28-03-2018 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 SUPERFAMILY SSF55424 343 456 1.48E-34 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APY29_RS08435 77e4d4625518beab32caee5f815c107e 456 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 325 7.6E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS06045 b6b69e88803d70c9e693b2cc798446b2 390 Pfam PF07007 Lysozyme inhibitor LprI 29 107 1.1E-6 T 28-03-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal APY29_RS21620 71b2b8d08fe119cce07b75477f79310b 305 Gene3D G3DSA:3.40.190.10 180 267 7.7E-17 T 28-03-2018 APY29_RS21620 71b2b8d08fe119cce07b75477f79310b 305 SUPERFAMILY SSF53850 92 299 4.65E-34 T 28-03-2018 APY29_RS21620 71b2b8d08fe119cce07b75477f79310b 305 SUPERFAMILY SSF46785 6 110 1.77E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS21620 71b2b8d08fe119cce07b75477f79310b 305 Gene3D G3DSA:3.40.190.10 89 179 1.0E-18 T 28-03-2018 APY29_RS21620 71b2b8d08fe119cce07b75477f79310b 305 Gene3D G3DSA:1.10.10.10 2 88 3.3E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS21620 71b2b8d08fe119cce07b75477f79310b 305 Pfam PF03466 LysR substrate binding domain 90 294 4.8E-34 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS21620 71b2b8d08fe119cce07b75477f79310b 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 64 6.6E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS07655 3cf599a1f1e1de554ee14543c6db574a 222 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 93 101 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APY29_RS07655 3cf599a1f1e1de554ee14543c6db574a 222 SUPERFAMILY SSF47741 138 219 4.45E-26 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APY29_RS07655 3cf599a1f1e1de554ee14543c6db574a 222 Gene3D G3DSA:3.10.20.30 52 128 1.1E-27 T 28-03-2018 IPR012675 Beta-grasp domain APY29_RS07655 3cf599a1f1e1de554ee14543c6db574a 222 Gene3D G3DSA:1.10.150.120 129 222 2.6E-34 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APY29_RS07655 3cf599a1f1e1de554ee14543c6db574a 222 Pfam PF01799 [2Fe-2S] binding domain 127 214 6.3E-29 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APY29_RS07655 3cf599a1f1e1de554ee14543c6db574a 222 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 60 108 4.4E-10 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APY29_RS07655 3cf599a1f1e1de554ee14543c6db574a 222 SUPERFAMILY SSF54292 56 141 3.41E-27 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APY29_RS21845 c8eddd559615ba45fdc32070766cde99 214 SUPERFAMILY SSF49478 138 188 1.8E-6 T 28-03-2018 APY29_RS21845 c8eddd559615ba45fdc32070766cde99 214 Gene3D G3DSA:2.60.40.10 127 208 7.1E-7 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS09900 0633a53c445d8d907c0af6690c078ff6 247 Gene3D G3DSA:1.10.760.10 29 212 2.3E-57 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS09900 0633a53c445d8d907c0af6690c078ff6 247 PRINTS PR00603 Cytochrome C1 signature 193 212 1.6E-11 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 APY29_RS09900 0633a53c445d8d907c0af6690c078ff6 247 PRINTS PR00603 Cytochrome C1 signature 108 132 1.6E-11 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 APY29_RS09900 0633a53c445d8d907c0af6690c078ff6 247 PRINTS PR00603 Cytochrome C1 signature 212 227 1.6E-11 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 APY29_RS09900 0633a53c445d8d907c0af6690c078ff6 247 PRINTS PR00603 Cytochrome C1 signature 46 65 1.6E-11 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 APY29_RS09900 0633a53c445d8d907c0af6690c078ff6 247 SUPERFAMILY SSF46626 32 211 5.93E-49 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS09900 0633a53c445d8d907c0af6690c078ff6 247 Gene3D G3DSA:1.20.5.100 216 246 9.5E-16 T 28-03-2018 APY29_RS09900 0633a53c445d8d907c0af6690c078ff6 247 Pfam PF02167 Cytochrome C1 family 38 246 6.9E-23 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 APY29_RS04990 5a42234b2ce2541f0a68dc0e1cf6a823 85 SUPERFAMILY SSF55021 1 75 3.66E-6 T 28-03-2018 APY29_RS04990 5a42234b2ce2541f0a68dc0e1cf6a823 85 Pfam PF13710 ACT domain 12 73 1.2E-18 T 28-03-2018 APY29_RS10575 52f15dd8ed781c9e3de2a9f6fa0889b7 301 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 50 281 4.9E-19 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS10575 52f15dd8ed781c9e3de2a9f6fa0889b7 301 Gene3D G3DSA:3.60.10.10 19 290 7.4E-44 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS10575 52f15dd8ed781c9e3de2a9f6fa0889b7 301 SUPERFAMILY SSF56219 45 289 7.72E-41 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS09470 31f5a7dd8d76e2941a809a35d885143d 374 Pfam PF05593 RHS Repeat 116 152 4.6E-7 T 28-03-2018 IPR031325 RHS repeat APY29_RS06245 637f09e74d0f4046afc5a56f004b534d 795 Gene3D G3DSA:2.170.130.10 27 171 5.6E-28 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS06245 637f09e74d0f4046afc5a56f004b534d 795 SUPERFAMILY SSF56935 37 791 4.76E-109 T 28-03-2018 APY29_RS06245 637f09e74d0f4046afc5a56f004b534d 795 Gene3D G3DSA:2.40.170.20 172 794 2.8E-73 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS06245 637f09e74d0f4046afc5a56f004b534d 795 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 44 - T 28-03-2018 IPR010916 TonB box, conserved site APY29_RS06245 637f09e74d0f4046afc5a56f004b534d 795 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 172 4.5E-21 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS06245 637f09e74d0f4046afc5a56f004b534d 795 Pfam PF00593 TonB dependent receptor 283 790 9.6E-52 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS20025 aa01ae8d3172392dbf9a5725df83fd11 294 Pfam PF00892 EamA-like transporter family 150 277 1.4E-7 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 APY29_RS20025 aa01ae8d3172392dbf9a5725df83fd11 294 Pfam PF00892 EamA-like transporter family 6 139 1.2E-13 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 APY29_RS20025 aa01ae8d3172392dbf9a5725df83fd11 294 SUPERFAMILY SSF103481 38 144 8.89E-16 T 28-03-2018 APY29_RS20025 aa01ae8d3172392dbf9a5725df83fd11 294 SUPERFAMILY SSF103481 191 280 4.18E-13 T 28-03-2018 APY29_RS00980 a44799db3666ce2cd72c067a0ba8ec7d 231 Gene3D G3DSA:3.40.50.300 17 231 1.9E-4 T 28-03-2018 APY29_RS00980 a44799db3666ce2cd72c067a0ba8ec7d 231 Gene3D G3DSA:3.40.50.300 1 16 0.31 T 28-03-2018 APY29_RS00125 6a9b76f76c41d5a4041c3215959d4351 217 Pfam PF07751 Abi-like protein 90 194 1.9E-22 T 28-03-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like APY29_RS08010 0ba94e0733b1dcaeef7029236d648ebe 60 Pfam PF17067 Ribosomal protein S31e 2 38 7.4E-8 T 28-03-2018 APY29_RS08010 0ba94e0733b1dcaeef7029236d648ebe 60 TIGRFAM TIGR04560 ribo_THX: ribosomal small subunit protein bTHX 1 24 9.3E-13 T 28-03-2018 IPR030826 30S ribosomal protein GO:0005840 APY29_RS09570 b64ba14d495f7900cb1e4091f3f4e45a 356 SUPERFAMILY SSF111337 2 344 2.09E-130 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 APY29_RS09570 b64ba14d495f7900cb1e4091f3f4e45a 356 Pfam PF02547 Queuosine biosynthesis protein 4 344 2.3E-129 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 APY29_RS09570 b64ba14d495f7900cb1e4091f3f4e45a 356 Gene3D G3DSA:3.40.1780.10 1 118 5.2E-30 T 28-03-2018 APY29_RS09570 b64ba14d495f7900cb1e4091f3f4e45a 356 Gene3D G3DSA:3.40.1780.10 171 345 1.0E-64 T 28-03-2018 APY29_RS09570 b64ba14d495f7900cb1e4091f3f4e45a 356 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 345 46.084 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 APY29_RS09570 b64ba14d495f7900cb1e4091f3f4e45a 356 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3 344 3.9E-128 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 APY29_RS20500 fe1b910769f37ea8fb1cb92c55541728 210 SUPERFAMILY SSF69593 18 203 1.57E-29 T 28-03-2018 APY29_RS20500 fe1b910769f37ea8fb1cb92c55541728 210 Gene3D G3DSA:3.40.1130.10 13 206 8.7E-28 T 28-03-2018 APY29_RS20500 fe1b910769f37ea8fb1cb92c55541728 210 Pfam PF01553 Acyltransferase 29 152 2.1E-14 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APY29_RS20500 fe1b910769f37ea8fb1cb92c55541728 210 SMART SM00563 34 155 2.1E-13 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APY29_RS02125 789fd3fd7063a79459e2ff914068a734 303 SUPERFAMILY SSF56349 98 285 1.65E-17 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APY29_RS02125 789fd3fd7063a79459e2ff914068a734 303 Gene3D G3DSA:1.10.443.10 202 301 2.2E-5 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS02125 789fd3fd7063a79459e2ff914068a734 303 Pfam PF13356 Arm DNA-binding domain 6 92 1.6E-10 T 28-03-2018 IPR025166 Integrase, DNA-binding domain APY29_RS02125 789fd3fd7063a79459e2ff914068a734 303 Gene3D G3DSA:1.10.150.130 88 201 6.8E-11 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal APY29_RS13900 22b6c530701e4e6dc4513af88a416d89 465 Gene3D G3DSA:3.40.50.300 252 464 6.5E-20 T 28-03-2018 APY29_RS13900 22b6c530701e4e6dc4513af88a416d89 465 SUPERFAMILY SSF52540 133 189 3.54E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS13900 22b6c530701e4e6dc4513af88a416d89 465 SUPERFAMILY SSF52540 252 444 3.54E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS13900 22b6c530701e4e6dc4513af88a416d89 465 SMART SM00670 6 145 3.0E-12 T 28-03-2018 IPR002716 PIN domain APY29_RS13900 22b6c530701e4e6dc4513af88a416d89 465 Pfam PF13638 PIN domain 8 158 1.2E-39 T 28-03-2018 IPR002716 PIN domain APY29_RS13900 22b6c530701e4e6dc4513af88a416d89 465 Pfam PF02562 PhoH-like protein 253 455 2.8E-54 T 28-03-2018 IPR003714 PhoH-like protein GO:0005524 APY29_RS13900 22b6c530701e4e6dc4513af88a416d89 465 Gene3D G3DSA:3.40.50.1010 5 250 8.3E-42 T 28-03-2018 IPR029060 PIN domain-like APY29_RS13900 22b6c530701e4e6dc4513af88a416d89 465 SUPERFAMILY SSF88723 108 157 9.81E-11 T 28-03-2018 IPR029060 PIN domain-like APY29_RS13900 22b6c530701e4e6dc4513af88a416d89 465 SUPERFAMILY SSF88723 7 67 9.81E-11 T 28-03-2018 IPR029060 PIN domain-like APY29_RS15305 d22130504e6ad02892b16252d06e1439 324 Pfam PF00990 Diguanylate cyclase, GGDEF domain 166 318 5.7E-37 T 28-03-2018 IPR000160 GGDEF domain APY29_RS15305 d22130504e6ad02892b16252d06e1439 324 SUPERFAMILY SSF55073 171 322 8.63E-41 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS15305 d22130504e6ad02892b16252d06e1439 324 Gene3D G3DSA:3.30.70.270 151 324 2.7E-47 T 28-03-2018 APY29_RS15305 d22130504e6ad02892b16252d06e1439 324 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 162 323 2.9E-41 T 28-03-2018 IPR000160 GGDEF domain APY29_RS15305 d22130504e6ad02892b16252d06e1439 324 SMART SM00267 155 323 6.1E-52 T 28-03-2018 IPR000160 GGDEF domain APY29_RS10235 95b212b28d39d8364313202dbb79b2c0 379 SUPERFAMILY SSF51126 35 378 1.08E-45 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS10235 95b212b28d39d8364313202dbb79b2c0 379 Gene3D G3DSA:2.160.20.10 12 74 0.012 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS10235 95b212b28d39d8364313202dbb79b2c0 379 Pfam PF00544 Pectate lyase 217 311 6.3E-8 T 28-03-2018 IPR002022 Pectate lyase APY29_RS10235 95b212b28d39d8364313202dbb79b2c0 379 Gene3D G3DSA:2.160.20.10 75 379 4.8E-38 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS10235 95b212b28d39d8364313202dbb79b2c0 379 SMART SM00656 35 317 1.4E-6 T 28-03-2018 IPR002022 Pectate lyase APY29_RS08795 2629626417d770b579ad264e79b259dd 714 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 512 533 1.5E-15 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APY29_RS08795 2629626417d770b579ad264e79b259dd 714 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 90 110 1.5E-15 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APY29_RS08795 2629626417d770b579ad264e79b259dd 714 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 64 88 1.5E-15 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APY29_RS08795 2629626417d770b579ad264e79b259dd 714 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 279 301 1.5E-15 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APY29_RS08795 2629626417d770b579ad264e79b259dd 714 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 437 459 1.5E-15 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APY29_RS08795 2629626417d770b579ad264e79b259dd 714 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 9 709 5.4E-235 T 28-03-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08795 2629626417d770b579ad264e79b259dd 714 Pfam PF00361 Proton-conducting membrane transporter 139 421 1.4E-86 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08795 2629626417d770b579ad264e79b259dd 714 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 261 287 4.8E-65 T 28-03-2018 APY29_RS08795 2629626417d770b579ad264e79b259dd 714 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 329 341 4.8E-65 T 28-03-2018 APY29_RS08795 2629626417d770b579ad264e79b259dd 714 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 438 457 4.8E-65 T 28-03-2018 APY29_RS08795 2629626417d770b579ad264e79b259dd 714 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 88 113 4.8E-65 T 28-03-2018 APY29_RS08795 2629626417d770b579ad264e79b259dd 714 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 239 260 4.8E-65 T 28-03-2018 APY29_RS08795 2629626417d770b579ad264e79b259dd 714 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 116 136 4.8E-65 T 28-03-2018 APY29_RS08795 2629626417d770b579ad264e79b259dd 714 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 163 184 4.8E-65 T 28-03-2018 APY29_RS08795 2629626417d770b579ad264e79b259dd 714 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 70 127 1.0E-24 T 28-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS14610 52bcc0e572acf201ad7eb58fa92e04ea 320 SMART SM01126 137 285 8.8E-50 T 28-03-2018 IPR024445 ISXO2-like transposase domain APY29_RS14610 52bcc0e572acf201ad7eb58fa92e04ea 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 3.6E-11 T 28-03-2018 IPR024442 Transposase, zinc-ribbon APY29_RS14610 52bcc0e572acf201ad7eb58fa92e04ea 320 Pfam PF12762 ISXO2-like transposase domain 137 285 2.3E-32 T 28-03-2018 IPR024445 ISXO2-like transposase domain APY29_RS20175 52bcc0e572acf201ad7eb58fa92e04ea 320 SMART SM01126 137 285 8.8E-50 T 28-03-2018 IPR024445 ISXO2-like transposase domain APY29_RS20175 52bcc0e572acf201ad7eb58fa92e04ea 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 3.6E-11 T 28-03-2018 IPR024442 Transposase, zinc-ribbon APY29_RS20175 52bcc0e572acf201ad7eb58fa92e04ea 320 Pfam PF12762 ISXO2-like transposase domain 137 285 2.3E-32 T 28-03-2018 IPR024445 ISXO2-like transposase domain APY29_RS12935 6d77c312da3887c66aab9834673742f7 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 1.0E-37 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APY29_RS12935 6d77c312da3887c66aab9834673742f7 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 1.0E-37 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APY29_RS12935 6d77c312da3887c66aab9834673742f7 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 1.0E-37 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APY29_RS12935 6d77c312da3887c66aab9834673742f7 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 1.0E-37 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APY29_RS12935 6d77c312da3887c66aab9834673742f7 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 1.0E-37 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APY29_RS12935 6d77c312da3887c66aab9834673742f7 376 SUPERFAMILY SSF160544 245 352 7.85E-40 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal APY29_RS12935 6d77c312da3887c66aab9834673742f7 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 9 354 8.2E-136 T 28-03-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 APY29_RS12935 6d77c312da3887c66aab9834673742f7 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 348 3.0E-120 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APY29_RS12935 6d77c312da3887c66aab9834673742f7 376 Gene3D G3DSA:3.40.1690.10 219 354 3.4E-55 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal APY29_RS07460 ccad88f7d0d4d3d039f9a0cf20f08028 109 Pfam PF00355 Rieske [2Fe-2S] domain 4 95 1.9E-15 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APY29_RS07460 ccad88f7d0d4d3d039f9a0cf20f08028 109 Gene3D G3DSA:2.102.10.10 2 109 9.8E-23 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APY29_RS07460 ccad88f7d0d4d3d039f9a0cf20f08028 109 SUPERFAMILY SSF50022 4 106 2.23E-25 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APY29_RS20785 5d68bf2f8fec71dbe42b6e142397b307 160 Pfam PF06127 Protein of unknown function (DUF962) 10 155 1.5E-25 T 28-03-2018 IPR009305 Protein of unknown function DUF962 APY29_RS08405 3b3ecc2fe7c605884cab8340d7f402cc 163 SUPERFAMILY SSF54637 8 155 3.25E-41 T 28-03-2018 IPR029069 HotDog domain APY29_RS08405 3b3ecc2fe7c605884cab8340d7f402cc 163 Pfam PF03061 Thioesterase superfamily 22 94 3.9E-18 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 APY29_RS08405 3b3ecc2fe7c605884cab8340d7f402cc 163 Gene3D G3DSA:3.10.129.10 4 152 3.1E-38 T 28-03-2018 APY29_RS00665 ab3aed391f53f25ee2232ab746fb865f 126 SUPERFAMILY SSF51182 9 114 3.67E-25 T 28-03-2018 IPR011051 RmlC-like cupin domain APY29_RS00665 ab3aed391f53f25ee2232ab746fb865f 126 Pfam PF07883 Cupin domain 45 101 1.2E-11 T 28-03-2018 IPR013096 Cupin 2, conserved barrel APY29_RS00665 ab3aed391f53f25ee2232ab746fb865f 126 Gene3D G3DSA:2.60.120.10 6 111 6.3E-22 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS12940 a5076167d093b70e51d67f023e309c0f 697 Pfam PF00771 FHIPEP family 30 687 4.6E-257 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APY29_RS12940 a5076167d093b70e51d67f023e309c0f 697 PIRSF PIRSF005419 9 697 4.4E-235 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APY29_RS12940 a5076167d093b70e51d67f023e309c0f 697 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 23 696 1.9E-251 T 28-03-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 APY29_RS12940 a5076167d093b70e51d67f023e309c0f 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 37 50 4.7E-50 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APY29_RS12940 a5076167d093b70e51d67f023e309c0f 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 141 157 4.7E-50 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APY29_RS12940 a5076167d093b70e51d67f023e309c0f 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 160 178 4.7E-50 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APY29_RS12940 a5076167d093b70e51d67f023e309c0f 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 74 93 4.7E-50 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APY29_RS12940 a5076167d093b70e51d67f023e309c0f 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 190 207 4.7E-50 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APY29_RS12940 a5076167d093b70e51d67f023e309c0f 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 241 255 4.7E-50 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APY29_RS04320 76fc91a2444c33ca7bc779c3cdb4c7ae 564 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 563 39.253 T 28-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APY29_RS04320 76fc91a2444c33ca7bc779c3cdb4c7ae 564 Pfam PF03129 Anticodon binding domain 471 553 7.8E-13 T 28-03-2018 IPR004154 Anticodon-binding APY29_RS04320 76fc91a2444c33ca7bc779c3cdb4c7ae 564 Gene3D G3DSA:3.40.50.800 457 563 1.8E-24 T 28-03-2018 IPR004154 Anticodon-binding APY29_RS04320 76fc91a2444c33ca7bc779c3cdb4c7ae 564 Gene3D G3DSA:3.30.930.10 11 456 5.1E-95 T 28-03-2018 APY29_RS04320 76fc91a2444c33ca7bc779c3cdb4c7ae 564 SUPERFAMILY SSF52954 460 562 2.62E-23 T 28-03-2018 IPR004154 Anticodon-binding APY29_RS04320 76fc91a2444c33ca7bc779c3cdb4c7ae 564 SUPERFAMILY SSF55681 403 474 2.21E-100 T 28-03-2018 APY29_RS04320 76fc91a2444c33ca7bc779c3cdb4c7ae 564 SUPERFAMILY SSF55681 10 237 2.21E-100 T 28-03-2018 APY29_RS04320 76fc91a2444c33ca7bc779c3cdb4c7ae 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 6.8E-16 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 APY29_RS04320 76fc91a2444c33ca7bc779c3cdb4c7ae 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 6.8E-16 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 APY29_RS04320 76fc91a2444c33ca7bc779c3cdb4c7ae 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 6.8E-16 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 APY29_RS04320 76fc91a2444c33ca7bc779c3cdb4c7ae 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 6.8E-16 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 APY29_RS04320 76fc91a2444c33ca7bc779c3cdb4c7ae 564 Pfam PF04073 Aminoacyl-tRNA editing domain 256 375 2.1E-30 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APY29_RS04320 76fc91a2444c33ca7bc779c3cdb4c7ae 564 SUPERFAMILY SSF55826 219 386 6.15E-34 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APY29_RS04320 76fc91a2444c33ca7bc779c3cdb4c7ae 564 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 455 4.3E-44 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 APY29_RS04320 76fc91a2444c33ca7bc779c3cdb4c7ae 564 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 554 6.7E-212 T 28-03-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APY29_RS17820 ce796593f41f097d97c3b3cf07855475 130 Gene3D G3DSA:3.40.1800.10 5 107 9.6E-9 T 28-03-2018 APY29_RS03595 0a15e929e2cb6b124f56c656fa62780c 545 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 8 540 9.1E-123 T 28-03-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 APY29_RS03595 0a15e929e2cb6b124f56c656fa62780c 545 PRINTS PR01084 Na+/H+ exchanger signature 119 129 4.2E-5 T 28-03-2018 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: R-HSA-425986 APY29_RS03595 0a15e929e2cb6b124f56c656fa62780c 545 PRINTS PR01084 Na+/H+ exchanger signature 69 83 4.2E-5 T 28-03-2018 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: R-HSA-425986 APY29_RS03595 0a15e929e2cb6b124f56c656fa62780c 545 PRINTS PR01084 Na+/H+ exchanger signature 55 66 4.2E-5 T 28-03-2018 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: R-HSA-425986 APY29_RS03595 0a15e929e2cb6b124f56c656fa62780c 545 Pfam PF00999 Sodium/hydrogen exchanger family 11 419 4.7E-66 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APY29_RS08175 e6e7db444eb98b1483212f5e5c470c3c 601 Pfam PF05960 Bacterial protein of unknown function (DUF885) 59 594 2.6E-109 T 28-03-2018 IPR010281 Protein of unknown function DUF885 APY29_RS05415 2b3ac89489cb0fdbf168a5f4c1c01ee0 728 SUPERFAMILY SSF56935 44 728 1.4E-118 T 28-03-2018 APY29_RS05415 2b3ac89489cb0fdbf168a5f4c1c01ee0 728 Pfam PF00593 TonB dependent receptor 279 727 1.4E-45 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS05415 2b3ac89489cb0fdbf168a5f4c1c01ee0 728 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 79 728 2.2E-111 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APY29_RS05415 2b3ac89489cb0fdbf168a5f4c1c01ee0 728 Pfam PF07715 TonB-dependent Receptor Plug Domain 77 177 9.8E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS05415 2b3ac89489cb0fdbf168a5f4c1c01ee0 728 Gene3D G3DSA:2.170.130.10 42 186 4.2E-21 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS05415 2b3ac89489cb0fdbf168a5f4c1c01ee0 728 Gene3D G3DSA:2.40.170.20 189 728 7.1E-74 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS02760 f6a4e7ec07f8c298ec6174bd10accfe3 392 Pfam PF07995 Glucose / Sorbosone dehydrogenase 48 373 4.1E-126 T 28-03-2018 IPR012938 Glucose/Sorbosone dehydrogenase APY29_RS02760 f6a4e7ec07f8c298ec6174bd10accfe3 392 Gene3D G3DSA:2.120.10.30 24 289 3.7E-52 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS02760 f6a4e7ec07f8c298ec6174bd10accfe3 392 Gene3D G3DSA:2.120.10.30 290 376 1.2E-11 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS02760 f6a4e7ec07f8c298ec6174bd10accfe3 392 SUPERFAMILY SSF50952 25 372 2.22E-42 T 28-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 APY29_RS22195 fd5123348705d8f0e9a62ec1e60debac 491 Pfam PF00909 Ammonium Transporter Family 90 489 2.5E-118 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 APY29_RS22195 fd5123348705d8f0e9a62ec1e60debac 491 Gene3D G3DSA:1.10.3430.10 80 470 6.6E-127 T 28-03-2018 APY29_RS22195 fd5123348705d8f0e9a62ec1e60debac 491 TIGRFAM TIGR00836 amt: ammonium transporter 88 489 2.9E-130 T 28-03-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 APY29_RS22195 fd5123348705d8f0e9a62ec1e60debac 491 ProSitePatterns PS01219 Ammonium transporters signature. 246 271 - T 28-03-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 APY29_RS22195 fd5123348705d8f0e9a62ec1e60debac 491 SUPERFAMILY SSF111352 84 470 4.97E-123 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 APY29_RS22195 fd5123348705d8f0e9a62ec1e60debac 491 PRINTS PR00342 Rhesus blood group protein signature 189 205 2.4E-6 T 28-03-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 APY29_RS22195 fd5123348705d8f0e9a62ec1e60debac 491 PRINTS PR00342 Rhesus blood group protein signature 285 303 2.4E-6 T 28-03-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 APY29_RS22195 fd5123348705d8f0e9a62ec1e60debac 491 PRINTS PR00342 Rhesus blood group protein signature 316 338 2.4E-6 T 28-03-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 APY29_RS22195 fd5123348705d8f0e9a62ec1e60debac 491 PRINTS PR00342 Rhesus blood group protein signature 371 389 2.4E-6 T 28-03-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 APY29_RS13360 2784153ab49dcbbdabae41a0eceeae61 166 Gene3D G3DSA:3.10.450.50 21 160 4.9E-4 T 28-03-2018 APY29_RS02225 65d8a0a2735bf1ef02e52f704375a786 386 Pfam PF02687 FtsX-like permease family 290 374 1.3E-7 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 APY29_RS02225 65d8a0a2735bf1ef02e52f704375a786 386 Pfam PF12704 MacB-like periplasmic core domain 23 229 3.6E-8 T 28-03-2018 IPR025857 MacB-like periplasmic core domain APY29_RS05425 7c22098198d22ed5dbb042d203f622bf 144 SUPERFAMILY SSF51261 16 137 4.71E-32 T 28-03-2018 IPR011055 Duplicated hybrid motif APY29_RS05425 7c22098198d22ed5dbb042d203f622bf 144 Gene3D G3DSA:2.70.70.10 1 142 3.1E-30 T 28-03-2018 APY29_RS05425 7c22098198d22ed5dbb042d203f622bf 144 Pfam PF01551 Peptidase family M23 26 127 1.0E-23 T 28-03-2018 IPR016047 Peptidase M23 APY29_RS20260 221d1e9d9c161f6253d0d9ceaa99742e 105 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 104 53.764 T 28-03-2018 IPR009662 Malonate decarboxylase delta subunit APY29_RS20260 221d1e9d9c161f6253d0d9ceaa99742e 105 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 2 99 3.8E-37 T 28-03-2018 IPR009662 Malonate decarboxylase delta subunit APY29_RS20260 221d1e9d9c161f6253d0d9ceaa99742e 105 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 20 98 1.9E-24 T 28-03-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein APY29_RS20260 221d1e9d9c161f6253d0d9ceaa99742e 105 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 99 2.0E-50 T 28-03-2018 IPR009662 Malonate decarboxylase delta subunit APY29_RS11575 2e68932f746097a78067155445463584 117 Pfam PF11284 Protein of unknown function (DUF3085) 22 111 3.0E-32 T 28-03-2018 IPR021436 Protein of unknown function DUF3085 APY29_RS13255 c72b814a846a88da4e49cda3610d6ada 289 Pfam PF00378 Enoyl-CoA hydratase/isomerase 66 228 1.9E-21 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APY29_RS13255 c72b814a846a88da4e49cda3610d6ada 289 Gene3D G3DSA:3.90.226.10 2 280 1.8E-37 T 28-03-2018 APY29_RS13255 c72b814a846a88da4e49cda3610d6ada 289 SUPERFAMILY SSF52096 65 257 1.3E-35 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS07435 7bd6d9e3fd3fe329b63f7be63361e2fc 171 Pfam PF10029 Predicted periplasmic protein (DUF2271) 22 163 7.8E-53 T 28-03-2018 IPR014469 Protein of unknown function DUF2271 APY29_RS07435 7bd6d9e3fd3fe329b63f7be63361e2fc 171 PIRSF PIRSF014995 1 171 1.6E-72 T 28-03-2018 IPR014469 Protein of unknown function DUF2271 APY29_RS20100 4529e4903a764c88df96c6793b9b5f3e 131 Gene3D G3DSA:3.10.180.10 6 131 9.7E-21 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS20100 4529e4903a764c88df96c6793b9b5f3e 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 124 3.2E-9 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APY29_RS20100 4529e4903a764c88df96c6793b9b5f3e 131 SUPERFAMILY SSF54593 2 130 5.36E-23 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS20375 21a2c808f466f8683b4f8b532c301221 596 Pfam PF13205 Bacterial Ig-like domain 205 304 4.0E-14 T 28-03-2018 IPR032812 SbsA, Ig-like domain APY29_RS20375 21a2c808f466f8683b4f8b532c301221 596 SUPERFAMILY SSF54060 539 577 8.0E-45 T 28-03-2018 APY29_RS20375 21a2c808f466f8683b4f8b532c301221 596 SUPERFAMILY SSF54060 319 510 8.0E-45 T 28-03-2018 APY29_RS20375 21a2c808f466f8683b4f8b532c301221 596 Gene3D G3DSA:2.60.40.1260 26 136 1.2E-5 T 28-03-2018 IPR001322 Lamin Tail Domain APY29_RS20375 21a2c808f466f8683b4f8b532c301221 596 Pfam PF04231 Endonuclease I 325 577 2.9E-37 T 28-03-2018 IPR007346 Endonuclease I GO:0004518 APY29_RS15105 2681fcaaa2990c5f350300d865b008a7 87 Pfam PF11259 Protein of unknown function (DUF3060) 28 83 9.6E-12 T 28-03-2018 IPR021417 Protein of unknown function DUF3060 APY29_RS03235 b56f618c448eb5816971a12ab66e6c3f 66 Gene3D G3DSA:3.30.750.24 9 64 1.9E-4 T 28-03-2018 IPR002645 STAS domain APY29_RS20775 00d5151b882e805e42558b11bd9d2e09 584 Gene3D G3DSA:3.30.20.10 82 138 1.6E-18 T 28-03-2018 APY29_RS20775 00d5151b882e805e42558b11bd9d2e09 584 Pfam PF01551 Peptidase family M23 260 362 2.0E-17 T 28-03-2018 IPR016047 Peptidase M23 APY29_RS20775 00d5151b882e805e42558b11bd9d2e09 584 Pfam PF00182 Chitinase class I 102 164 5.2E-6 T 28-03-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 APY29_RS20775 00d5151b882e805e42558b11bd9d2e09 584 SUPERFAMILY SSF51261 233 358 1.01E-13 T 28-03-2018 IPR011055 Duplicated hybrid motif APY29_RS20775 00d5151b882e805e42558b11bd9d2e09 584 Gene3D G3DSA:1.10.101.10 382 462 9.8E-21 T 28-03-2018 IPR002477 Peptidoglycan binding-like APY29_RS20775 00d5151b882e805e42558b11bd9d2e09 584 Gene3D G3DSA:2.70.70.10 139 371 1.2E-22 T 28-03-2018 APY29_RS20775 00d5151b882e805e42558b11bd9d2e09 584 SUPERFAMILY SSF47090 389 459 3.14E-17 T 28-03-2018 IPR002477 Peptidoglycan binding-like APY29_RS20775 00d5151b882e805e42558b11bd9d2e09 584 Pfam PF01471 Putative peptidoglycan binding domain 398 458 3.6E-16 T 28-03-2018 IPR002477 Peptidoglycan binding-like APY29_RS20775 00d5151b882e805e42558b11bd9d2e09 584 SUPERFAMILY SSF53955 77 200 3.37E-40 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS20775 00d5151b882e805e42558b11bd9d2e09 584 SUPERFAMILY SSF53955 14 50 3.37E-40 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS19120 9a4a71f5c0f329d222fe0d3b32911cf2 122 SUPERFAMILY SSF52980 7 105 1.19E-15 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 APY29_RS19120 9a4a71f5c0f329d222fe0d3b32911cf2 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 5 116 21.808 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 APY29_RS19120 9a4a71f5c0f329d222fe0d3b32911cf2 122 Gene3D G3DSA:3.40.1350.10 11 122 6.7E-31 T 28-03-2018 APY29_RS19120 9a4a71f5c0f329d222fe0d3b32911cf2 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 5 118 7.0E-33 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 APY29_RS19120 9a4a71f5c0f329d222fe0d3b32911cf2 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 101 1.9E-21 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 APY29_RS06800 5144079d54632b6120ee729560fbbd21 369 Gene3D G3DSA:3.30.1360.120 2 128 6.5E-33 T 28-03-2018 APY29_RS06800 5144079d54632b6120ee729560fbbd21 369 Gene3D G3DSA:2.40.30.110 282 368 4.3E-18 T 28-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APY29_RS06800 5144079d54632b6120ee729560fbbd21 369 SUPERFAMILY SSF101790 274 361 6.54E-22 T 28-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain APY29_RS06800 5144079d54632b6120ee729560fbbd21 369 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 358 1.5E-132 T 28-03-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 APY29_RS06800 5144079d54632b6120ee729560fbbd21 369 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 259 1.5E-89 T 28-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal APY29_RS06800 5144079d54632b6120ee729560fbbd21 369 Gene3D G3DSA:3.30.1360.120 129 236 7.5E-27 T 28-03-2018 APY29_RS06800 5144079d54632b6120ee729560fbbd21 369 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 45.95 T 28-03-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APY29_RS06800 5144079d54632b6120ee729560fbbd21 369 Gene3D G3DSA:4.10.1250.10 237 280 2.5E-17 T 28-03-2018 APY29_RS06800 5144079d54632b6120ee729560fbbd21 369 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 266 353 1.3E-18 T 28-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APY29_RS06800 5144079d54632b6120ee729560fbbd21 369 SUPERFAMILY SSF103025 3 281 2.02E-94 T 28-03-2018 APY29_RS06800 5144079d54632b6120ee729560fbbd21 369 PIRSF PIRSF006487 1 364 1.7E-86 T 28-03-2018 APY29_RS12710 b4cad75467511c8fe9b4411d86f03f03 230 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 227 25.206 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 APY29_RS12710 b4cad75467511c8fe9b4411d86f03f03 230 Pfam PF02107 Flagellar L-ring protein 48 227 1.3E-56 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 APY29_RS12710 b4cad75467511c8fe9b4411d86f03f03 230 PRINTS PR01008 Flagellar L-ring protein signature 70 82 2.5E-21 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 APY29_RS12710 b4cad75467511c8fe9b4411d86f03f03 230 PRINTS PR01008 Flagellar L-ring protein signature 143 158 2.5E-21 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 APY29_RS12710 b4cad75467511c8fe9b4411d86f03f03 230 PRINTS PR01008 Flagellar L-ring protein signature 190 204 2.5E-21 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 APY29_RS12710 b4cad75467511c8fe9b4411d86f03f03 230 PRINTS PR01008 Flagellar L-ring protein signature 169 185 2.5E-21 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 APY29_RS12710 b4cad75467511c8fe9b4411d86f03f03 230 PRINTS PR01008 Flagellar L-ring protein signature 206 220 2.5E-21 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 APY29_RS10525 eb74f03ad2561deb7f3e1f6e20c25e4d 301 Pfam PF02616 Segregation and condensation protein ScpA 64 274 1.3E-28 T 28-03-2018 IPR003768 Segregation and condensation protein A APY29_RS10525 eb74f03ad2561deb7f3e1f6e20c25e4d 301 Gene3D G3DSA:1.10.10.580 208 276 4.8E-14 T 28-03-2018 APY29_RS10525 eb74f03ad2561deb7f3e1f6e20c25e4d 301 Hamap MF_01805 Segregation and condensation protein A [scpA]. 47 277 21.998 T 28-03-2018 IPR003768 Segregation and condensation protein A APY29_RS06335 ddccd1912fe0f6a92947d784fbfe2688 634 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 14 634 33.571 T 28-03-2018 IPR023051 Potassium uptake protein, low affinity, Kup APY29_RS06335 ddccd1912fe0f6a92947d784fbfe2688 634 Pfam PF02705 K+ potassium transporter 23 555 3.3E-214 T 28-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 APY29_RS13315 40f42657cc3deb2698ff75f841385a2a 578 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 25 570 1.9E-134 T 28-03-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 APY29_RS13315 40f42657cc3deb2698ff75f841385a2a 578 Pfam PF02272 DHHA1 domain 320 452 4.0E-24 T 28-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 APY29_RS13315 40f42657cc3deb2698ff75f841385a2a 578 Gene3D G3DSA:3.90.1640.10 54 236 1.3E-18 T 28-03-2018 APY29_RS13315 40f42657cc3deb2698ff75f841385a2a 578 SUPERFAMILY SSF64182 48 459 3.92E-103 T 28-03-2018 APY29_RS13315 40f42657cc3deb2698ff75f841385a2a 578 Pfam PF01368 DHH family 74 201 2.3E-9 T 28-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 APY29_RS00010 c867f6e2869c4516183f78771b314218 366 Gene3D G3DSA:3.10.150.10 248 366 7.5E-28 T 28-03-2018 APY29_RS00010 c867f6e2869c4516183f78771b314218 366 Gene3D G3DSA:3.10.150.10 123 247 1.5E-34 T 28-03-2018 APY29_RS00010 c867f6e2869c4516183f78771b314218 366 Gene3D G3DSA:3.10.150.10 1 122 2.0E-28 T 28-03-2018 APY29_RS00010 c867f6e2869c4516183f78771b314218 366 SMART SM00480 17 362 3.6E-137 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS00010 c867f6e2869c4516183f78771b314218 366 SUPERFAMILY SSF55979 127 244 5.8E-29 T 28-03-2018 APY29_RS00010 c867f6e2869c4516183f78771b314218 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 118 1.5E-37 T 28-03-2018 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS00010 c867f6e2869c4516183f78771b314218 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 365 1.6E-34 T 28-03-2018 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS00010 c867f6e2869c4516183f78771b314218 366 SUPERFAMILY SSF55979 246 366 2.9E-34 T 28-03-2018 APY29_RS00010 c867f6e2869c4516183f78771b314218 366 SUPERFAMILY SSF55979 1 116 1.21E-26 T 28-03-2018 APY29_RS00010 c867f6e2869c4516183f78771b314218 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 1.3E-36 T 28-03-2018 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS00010 c867f6e2869c4516183f78771b314218 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 3.6E-107 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS00010 c867f6e2869c4516183f78771b314218 366 PIRSF PIRSF000804 1 366 7.0E-121 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS22945 04e0751116d238bdc9c2feda20b187c9 393 Pfam PF03594 Benzoate membrane transport protein 10 383 2.1E-137 T 28-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 APY29_RS22945 04e0751116d238bdc9c2feda20b187c9 393 TIGRFAM TIGR00843 benE: benzoate transporter 12 385 6.4E-125 T 28-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 APY29_RS15210 60c7147170fa795e2237563567904bac 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 507 6.1E-20 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal APY29_RS15210 60c7147170fa795e2237563567904bac 554 Gene3D G3DSA:3.40.50.300 1 179 1.0E-22 T 28-03-2018 APY29_RS15210 60c7147170fa795e2237563567904bac 554 Gene3D G3DSA:3.40.50.300 244 520 6.1E-18 T 28-03-2018 APY29_RS15210 60c7147170fa795e2237563567904bac 554 PIRSF PIRSF003128 1 554 7.7E-146 T 28-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APY29_RS15210 60c7147170fa795e2237563567904bac 554 SUPERFAMILY SSF52540 286 507 2.45E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS15210 60c7147170fa795e2237563567904bac 554 SUPERFAMILY SSF52540 1 198 2.45E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS15210 60c7147170fa795e2237563567904bac 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 1.0E-145 T 28-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APY29_RS17405 9b09c9f5bf81beca4df5a3a170ba7b0c 146 SUPERFAMILY SSF55785 38 134 3.49E-11 T 28-03-2018 IPR000014 PAS domain APY29_RS17405 9b09c9f5bf81beca4df5a3a170ba7b0c 146 Pfam PF08670 MEKHLA domain 10 142 4.2E-44 T 28-03-2018 IPR013978 MEKHLA APY29_RS17405 9b09c9f5bf81beca4df5a3a170ba7b0c 146 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 53 120 5.7E-6 T 28-03-2018 IPR000014 PAS domain APY29_RS17405 9b09c9f5bf81beca4df5a3a170ba7b0c 146 Gene3D G3DSA:3.30.450.20 25 136 2.3E-11 T 28-03-2018 APY29_RS04325 b78f169cafb065f96a27799f86698447 132 Pfam PF13511 Domain of unknown function (DUF4124) 10 66 5.5E-16 T 28-03-2018 IPR025392 Domain of unknown function DUF4124 APY29_RS05320 2d4e4dab943ef0b6898a29eb40b09fbf 429 PIRSF PIRSF001369 38 429 4.6E-163 T 28-03-2018 IPR024176 Citrate synthase, bacterial-type APY29_RS05320 2d4e4dab943ef0b6898a29eb40b09fbf 429 Gene3D G3DSA:1.10.580.10 339 406 7.6E-10 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain APY29_RS05320 2d4e4dab943ef0b6898a29eb40b09fbf 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 423 4.0E-209 T 28-03-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 APY29_RS05320 2d4e4dab943ef0b6898a29eb40b09fbf 429 Gene3D G3DSA:1.10.580.10 30 298 1.8E-95 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain APY29_RS05320 2d4e4dab943ef0b6898a29eb40b09fbf 429 SUPERFAMILY SSF48256 8 429 1.57E-167 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 APY29_RS05320 2d4e4dab943ef0b6898a29eb40b09fbf 429 Pfam PF00285 Citrate synthase, C-terminal domain 47 412 2.9E-136 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 APY29_RS05320 2d4e4dab943ef0b6898a29eb40b09fbf 429 ProSitePatterns PS00480 Citrate synthase signature. 304 316 - T 28-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 APY29_RS05320 2d4e4dab943ef0b6898a29eb40b09fbf 429 PRINTS PR00143 Citrate synthase signature 297 317 1.0E-54 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 APY29_RS05320 2d4e4dab943ef0b6898a29eb40b09fbf 429 PRINTS PR00143 Citrate synthase signature 360 376 1.0E-54 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 APY29_RS05320 2d4e4dab943ef0b6898a29eb40b09fbf 429 PRINTS PR00143 Citrate synthase signature 380 394 1.0E-54 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 APY29_RS05320 2d4e4dab943ef0b6898a29eb40b09fbf 429 PRINTS PR00143 Citrate synthase signature 220 235 1.0E-54 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 APY29_RS05320 2d4e4dab943ef0b6898a29eb40b09fbf 429 PRINTS PR00143 Citrate synthase signature 166 179 1.0E-54 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 APY29_RS05320 2d4e4dab943ef0b6898a29eb40b09fbf 429 PRINTS PR00143 Citrate synthase signature 242 270 1.0E-54 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 APY29_RS10750 8f543d076e8d8715686e3728d7e4c553 158 SUPERFAMILY SSF47598 4 42 6.82E-6 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 APY29_RS10750 8f543d076e8d8715686e3728d7e4c553 158 Gene3D G3DSA:1.10.1220.10 1 42 9.4E-7 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APY29_RS10070 9fca57a1523c1ec89731d983738312f9 324 Pfam PF01963 TraB family 50 313 3.2E-78 T 28-03-2018 IPR002816 Pheromone shutdown, TraB APY29_RS10070 9fca57a1523c1ec89731d983738312f9 324 Gene3D G3DSA:3.10.450.50 207 320 0.012 T 28-03-2018 APY29_RS14100 e5098f05ec5fc917c04c5d302c995ebf 276 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 270 53.228 T 28-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 APY29_RS14100 e5098f05ec5fc917c04c5d302c995ebf 276 Gene3D G3DSA:3.20.20.70 11 271 1.2E-75 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS14100 e5098f05ec5fc917c04c5d302c995ebf 276 Pfam PF00793 DAHP synthetase I family 6 267 3.0E-67 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 APY29_RS14100 e5098f05ec5fc917c04c5d302c995ebf 276 SUPERFAMILY SSF51569 2 270 2.75E-106 T 28-03-2018 APY29_RS14100 e5098f05ec5fc917c04c5d302c995ebf 276 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 269 3.3E-129 T 28-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 APY29_RS15680 57554379154ce667e610b0daee7d0f10 275 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 231 257 - T 28-03-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 APY29_RS15680 57554379154ce667e610b0daee7d0f10 275 Pfam PF01148 Cytidylyltransferase family 3 269 3.9E-69 T 28-03-2018 APY29_RS02075 632f8529b4b3288335e61413ba57fbec 394 Pfam PF07394 Protein of unknown function (DUF1501) 31 381 7.7E-45 T 28-03-2018 IPR010869 Protein of unknown function DUF1501 APY29_RS02075 632f8529b4b3288335e61413ba57fbec 394 Gene3D G3DSA:3.40.720.10 21 363 1.0E-7 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APY29_RS02975 c7ee1ae0e535d807bb1c6e0e1f7d2801 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 115 191 3.9E-8 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal APY29_RS02975 c7ee1ae0e535d807bb1c6e0e1f7d2801 202 SUPERFAMILY SSF52833 2 80 8.24E-21 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS02975 c7ee1ae0e535d807bb1c6e0e1f7d2801 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 75 4.5E-14 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APY29_RS02975 c7ee1ae0e535d807bb1c6e0e1f7d2801 202 SUPERFAMILY SSF47616 76 197 4.32E-28 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like APY29_RS02975 c7ee1ae0e535d807bb1c6e0e1f7d2801 202 Gene3D G3DSA:3.40.30.10 1 92 8.0E-30 T 28-03-2018 APY29_RS02975 c7ee1ae0e535d807bb1c6e0e1f7d2801 202 Gene3D G3DSA:1.20.1050.10 93 200 2.0E-22 T 28-03-2018 APY29_RS04570 6c8aaae32ae16546fc29b1bd544ac456 322 Gene3D G3DSA:3.20.20.80 19 322 1.3E-28 T 28-03-2018 APY29_RS04570 6c8aaae32ae16546fc29b1bd544ac456 322 SUPERFAMILY SSF51445 49 301 3.88E-25 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS17120 c5f1f5b5a13e3ad7d4a6bc892305426a 784 Gene3D G3DSA:3.30.2080.10 610 775 2.6E-65 T 28-03-2018 APY29_RS17120 c5f1f5b5a13e3ad7d4a6bc892305426a 784 Gene3D G3DSA:2.70.98.10 35 358 3.5E-96 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 APY29_RS17120 c5f1f5b5a13e3ad7d4a6bc892305426a 784 Pfam PF07971 Glycosyl hydrolase family 92 279 761 6.7E-175 T 28-03-2018 IPR012939 Glycosyl hydrolase family 92 APY29_RS17120 c5f1f5b5a13e3ad7d4a6bc892305426a 784 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 35 765 6.8E-203 T 28-03-2018 IPR005887 Alpha-1,2-mannosidase, putative APY29_RS17120 c5f1f5b5a13e3ad7d4a6bc892305426a 784 SUPERFAMILY SSF48208 300 749 4.08E-29 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 APY29_RS17120 c5f1f5b5a13e3ad7d4a6bc892305426a 784 Gene3D G3DSA:1.20.1050.60 381 478 3.9E-29 T 28-03-2018 APY29_RS21400 be30ab02762972100e610f077886c97a 453 SUPERFAMILY SSF51445 58 148 4.3E-46 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS21400 be30ab02762972100e610f077886c97a 453 SUPERFAMILY SSF51445 216 418 4.3E-46 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS21400 be30ab02762972100e610f077886c97a 453 Gene3D G3DSA:3.20.20.80 56 448 3.3E-37 T 28-03-2018 APY29_RS21400 be30ab02762972100e610f077886c97a 453 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 89 411 1.2E-23 T 28-03-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 APY29_RS00360 37cbf759c4205fcbb6b6c34b6d5f370a 409 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 326 402 3.4E-10 T 28-03-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain APY29_RS00360 37cbf759c4205fcbb6b6c34b6d5f370a 409 Pfam PF01943 Polysaccharide biosynthesis protein 13 251 3.1E-12 T 28-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 APY29_RS13695 4fb9098f05b97f9b416888f6374203ce 520 Pfam PF00474 Sodium:solute symporter family 39 439 1.2E-70 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APY29_RS13695 4fb9098f05b97f9b416888f6374203ce 520 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 39 439 7.0E-107 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APY29_RS18925 13341d7957771d5881aae8e4158165bd 228 SUPERFAMILY SSF52540 5 190 1.02E-20 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS18925 13341d7957771d5881aae8e4158165bd 228 Gene3D G3DSA:3.40.50.300 4 226 1.6E-20 T 28-03-2018 APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Gene3D G3DSA:3.10.20.90 647 681 0.021 T 28-03-2018 APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Gene3D G3DSA:3.10.20.90 512 544 0.042 T 28-03-2018 APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Gene3D G3DSA:3.10.20.90 377 409 0.41 T 28-03-2018 APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Gene3D G3DSA:3.10.20.90 410 442 0.041 T 28-03-2018 APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Gene3D G3DSA:3.10.20.90 545 581 0.021 T 28-03-2018 APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Gene3D G3DSA:3.10.20.90 611 646 0.041 T 28-03-2018 APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Gene3D G3DSA:3.10.20.90 682 712 0.023 T 28-03-2018 APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Gene3D G3DSA:3.10.20.90 443 477 0.041 T 28-03-2018 APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Gene3D G3DSA:3.10.20.90 351 376 0.023 T 28-03-2018 APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Gene3D G3DSA:3.10.20.90 478 511 0.051 T 28-03-2018 APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Pfam PF03377 TAL effector repeat 493 524 1.0E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Pfam PF03377 TAL effector repeat 767 791 0.037 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Pfam PF03377 TAL effector repeat 527 558 1.0E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Pfam PF03377 TAL effector repeat 731 760 1.3E-11 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Pfam PF03377 TAL effector repeat 425 456 1.0E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Pfam PF03377 TAL effector repeat 561 592 2.5E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Pfam PF03377 TAL effector repeat 595 626 2.8E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Pfam PF03377 TAL effector repeat 357 388 2.5E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Pfam PF03377 TAL effector repeat 391 422 3.9E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Pfam PF03377 TAL effector repeat 323 354 1.3E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Pfam PF03377 TAL effector repeat 629 660 1.0E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Pfam PF03377 TAL effector repeat 663 694 2.5E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Pfam PF03377 TAL effector repeat 697 728 2.5E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Pfam PF03377 TAL effector repeat 459 490 1.0E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Pfam PF03377 TAL effector repeat 289 320 3.9E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Gene3D G3DSA:3.40.47.10 713 823 0.0085 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS00835 de28eb91b5c53cab1a4704c310f66172 1028 Gene3D G3DSA:3.40.47.10 216 350 0.016 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS12675 ee552c2926ca788cd6889b265f58fc35 135 Pfam PF00460 Flagella basal body rod protein 7 36 7.6E-9 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 APY29_RS12675 ee552c2926ca788cd6889b265f58fc35 135 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site APY29_RS12675 ee552c2926ca788cd6889b265f58fc35 135 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 6 135 9.4E-44 T 28-03-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 APY29_RS12675 ee552c2926ca788cd6889b265f58fc35 135 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 88 131 5.2E-10 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain APY29_RS06135 606589da51beefb15baaa8c0bc54ae67 173 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 167 1.4E-59 T 28-03-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 APY29_RS06135 606589da51beefb15baaa8c0bc54ae67 173 PIRSF PIRSF006135 1 171 1.1E-54 T 28-03-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 APY29_RS06135 606589da51beefb15baaa8c0bc54ae67 173 SUPERFAMILY SSF52540 3 169 4.14E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS06135 606589da51beefb15baaa8c0bc54ae67 173 Gene3D G3DSA:3.40.50.300 2 169 1.2E-63 T 28-03-2018 APY29_RS05825 6fe8fc04daf1a3da349981269af28c62 219 Gene3D G3DSA:3.40.10.10 146 219 1.8E-14 T 28-03-2018 IPR035451 Ada-like domain APY29_RS05825 6fe8fc04daf1a3da349981269af28c62 219 Pfam PF00565 Staphylococcal nuclease homologue 34 136 2.8E-19 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold APY29_RS05825 6fe8fc04daf1a3da349981269af28c62 219 SUPERFAMILY SSF50199 21 142 1.7E-33 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold APY29_RS05825 6fe8fc04daf1a3da349981269af28c62 219 SMART SM00318 14 137 3.1E-27 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold APY29_RS05825 6fe8fc04daf1a3da349981269af28c62 219 Gene3D G3DSA:2.40.50.90 19 145 2.3E-31 T 28-03-2018 IPR035437 Staphylococcal nuclease (SNase-like), OB-fold/extended TUDOR domain APY29_RS19550 40f806875f541f4cc52a18439f5c373c 171 Gene3D G3DSA:3.30.70.560 1 171 7.4E-42 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 APY29_RS19550 40f806875f541f4cc52a18439f5c373c 171 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 130 7.0E-29 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 APY29_RS19550 40f806875f541f4cc52a18439f5c373c 171 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 130 3.2E-24 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 APY29_RS19550 40f806875f541f4cc52a18439f5c373c 171 SUPERFAMILY SSF55083 1 151 9.81E-40 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 APY29_RS10090 a7f9f52b2e34d25f4c74933bc28cf913 299 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 6 268 4.6E-102 T 28-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 APY29_RS10090 a7f9f52b2e34d25f4c74933bc28cf913 299 Gene3D G3DSA:3.40.50.620 116 220 2.0E-27 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS10090 a7f9f52b2e34d25f4c74933bc28cf913 299 SUPERFAMILY SSF52374 6 279 2.36E-80 T 28-03-2018 APY29_RS10090 a7f9f52b2e34d25f4c74933bc28cf913 299 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 6 288 41.252 T 28-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 APY29_RS10090 a7f9f52b2e34d25f4c74933bc28cf913 299 Gene3D G3DSA:3.40.50.620 1 115 1.9E-29 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS10090 a7f9f52b2e34d25f4c74933bc28cf913 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 4.1E-13 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 APY29_RS10090 a7f9f52b2e34d25f4c74933bc28cf913 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 4.1E-13 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 APY29_RS10090 a7f9f52b2e34d25f4c74933bc28cf913 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 168 178 4.1E-13 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 APY29_RS10090 a7f9f52b2e34d25f4c74933bc28cf913 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 184 192 4.1E-13 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 APY29_RS10090 a7f9f52b2e34d25f4c74933bc28cf913 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 4.1E-13 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 APY29_RS10090 a7f9f52b2e34d25f4c74933bc28cf913 299 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 9 108 2.0E-24 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 APY29_RS10090 a7f9f52b2e34d25f4c74933bc28cf913 299 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 123 232 1.1E-20 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 APY29_RS17375 b88c6e5735d641643a5b4caadd90393f 357 Gene3D G3DSA:3.30.160.60 87 118 1.3E-7 T 28-03-2018 APY29_RS17375 b88c6e5735d641643a5b4caadd90393f 357 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 18 345 32.234 T 28-03-2018 IPR003770 Endolytic murein transglycosylase APY29_RS17375 b88c6e5735d641643a5b4caadd90393f 357 Gene3D G3DSA:3.30.160.60 313 347 2.1E-13 T 28-03-2018 APY29_RS17375 b88c6e5735d641643a5b4caadd90393f 357 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 18 344 2.1E-77 T 28-03-2018 IPR003770 Endolytic murein transglycosylase APY29_RS17375 b88c6e5735d641643a5b4caadd90393f 357 Pfam PF02618 YceG-like family 51 339 7.0E-75 T 28-03-2018 IPR003770 Endolytic murein transglycosylase APY29_RS05040 87b4494ade2e7079e0ff6697877031f0 947 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 163 4.4E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS05040 87b4494ade2e7079e0ff6697877031f0 947 Gene3D G3DSA:2.170.130.10 26 173 1.7E-31 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS05040 87b4494ade2e7079e0ff6697877031f0 947 Pfam PF00593 TonB dependent receptor 427 944 1.3E-49 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS05040 87b4494ade2e7079e0ff6697877031f0 947 Gene3D G3DSA:2.40.170.20 174 947 1.5E-77 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS05040 87b4494ade2e7079e0ff6697877031f0 947 SUPERFAMILY SSF56935 487 636 6.72E-102 T 28-03-2018 APY29_RS05040 87b4494ade2e7079e0ff6697877031f0 947 SUPERFAMILY SSF56935 301 436 6.72E-102 T 28-03-2018 APY29_RS05040 87b4494ade2e7079e0ff6697877031f0 947 SUPERFAMILY SSF56935 676 947 6.72E-102 T 28-03-2018 APY29_RS05040 87b4494ade2e7079e0ff6697877031f0 947 SUPERFAMILY SSF56935 36 228 6.72E-102 T 28-03-2018 APY29_RS09045 a486ffe67fc575b17f76ad9cbae6417c 163 Pfam PF13827 Domain of unknown function (DUF4189) 61 155 1.9E-20 T 28-03-2018 IPR025240 Domain of unknown function DUF4189 APY29_RS14320 1591235c62cb6e1d6270d37bd934bb96 236 Pfam PF01526 Tn3 transposase DDE domain 1 213 6.3E-79 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 APY29_RS17870 fbb0b89e2dd5cedf4b03f93b157a16e1 204 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 70 6.4E-9 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APY29_RS17870 fbb0b89e2dd5cedf4b03f93b157a16e1 204 SUPERFAMILY SSF52833 1 78 5.04E-16 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS17870 fbb0b89e2dd5cedf4b03f93b157a16e1 204 Gene3D G3DSA:3.40.30.10 1 95 3.8E-20 T 28-03-2018 APY29_RS17870 fbb0b89e2dd5cedf4b03f93b157a16e1 204 Gene3D G3DSA:1.20.1050.10 96 199 6.9E-19 T 28-03-2018 APY29_RS17870 fbb0b89e2dd5cedf4b03f93b157a16e1 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 124 190 2.1E-9 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal APY29_RS17870 fbb0b89e2dd5cedf4b03f93b157a16e1 204 SUPERFAMILY SSF47616 79 202 1.81E-21 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like APY29_RS23150 0103cff7607162d78b7011b093dd5b92 730 Pfam PF13538 UvrD-like helicase C-terminal domain 627 673 6.1E-15 T 28-03-2018 IPR027785 UvrD-like helicase C-terminal domain APY29_RS23150 0103cff7607162d78b7011b093dd5b92 730 SUPERFAMILY SSF52540 317 357 1.86E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23150 0103cff7607162d78b7011b093dd5b92 730 SUPERFAMILY SSF52540 389 420 1.86E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23150 0103cff7607162d78b7011b093dd5b92 730 SUPERFAMILY SSF52540 601 697 1.86E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23150 0103cff7607162d78b7011b093dd5b92 730 SUPERFAMILY SSF52540 472 546 1.86E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23150 0103cff7607162d78b7011b093dd5b92 730 Gene3D G3DSA:3.40.50.300 408 687 8.0E-26 T 28-03-2018 APY29_RS23150 0103cff7607162d78b7011b093dd5b92 730 Pfam PF13245 AAA domain 157 340 2.0E-29 T 28-03-2018 APY29_RS23150 0103cff7607162d78b7011b093dd5b92 730 Gene3D G3DSA:3.40.50.300 111 376 3.1E-46 T 28-03-2018 APY29_RS23150 0103cff7607162d78b7011b093dd5b92 730 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 13 696 45.709 T 28-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 APY29_RS23150 0103cff7607162d78b7011b093dd5b92 730 SUPERFAMILY SSF52540 3 222 4.67E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23150 0103cff7607162d78b7011b093dd5b92 730 SUPERFAMILY SSF52540 263 358 4.67E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS04055 794b651f9f8f6bd4aa3afaa2c32fb390 224 SUPERFAMILY SSF52540 1 220 1.15E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS04055 794b651f9f8f6bd4aa3afaa2c32fb390 224 Gene3D G3DSA:3.40.50.300 1 219 1.3E-59 T 28-03-2018 APY29_RS04055 794b651f9f8f6bd4aa3afaa2c32fb390 224 PIRSF PIRSF006755 2 221 1.4E-75 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 APY29_RS04055 794b651f9f8f6bd4aa3afaa2c32fb390 224 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 177 1.5E-47 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 APY29_RS04055 794b651f9f8f6bd4aa3afaa2c32fb390 224 Pfam PF13500 AAA domain 5 213 7.0E-38 T 28-03-2018 APY29_RS04055 794b651f9f8f6bd4aa3afaa2c32fb390 224 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 3 216 27.491 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 APY29_RS07740 8535121d60ec162053c271c441c9c6c6 296 PIRSF PIRSF006232 1 280 2.6E-90 T 28-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 APY29_RS07740 8535121d60ec162053c271c441c9c6c6 296 SUPERFAMILY SSF51182 3 284 8.91E-81 T 28-03-2018 IPR011051 RmlC-like cupin domain APY29_RS07740 8535121d60ec162053c271c441c9c6c6 296 Pfam PF05726 Pirin C-terminal cupin domain 174 272 3.5E-26 T 28-03-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 APY29_RS07740 8535121d60ec162053c271c441c9c6c6 296 Gene3D G3DSA:2.60.120.10 2 232 1.1E-59 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS07740 8535121d60ec162053c271c441c9c6c6 296 Pfam PF02678 Pirin 16 120 1.4E-34 T 28-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 APY29_RS07740 8535121d60ec162053c271c441c9c6c6 296 Gene3D G3DSA:2.60.120.10 233 278 0.32 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS09090 a3addf7091bf30437cf7ad4f06121b67 592 Gene3D G3DSA:3.20.20.80 60 481 5.6E-65 T 28-03-2018 APY29_RS09090 a3addf7091bf30437cf7ad4f06121b67 592 SUPERFAMILY SSF51011 493 562 1.26E-5 T 28-03-2018 APY29_RS09090 a3addf7091bf30437cf7ad4f06121b67 592 SMART SM00642 74 457 3.9E-28 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS09090 a3addf7091bf30437cf7ad4f06121b67 592 Gene3D G3DSA:2.60.40.1180 482 565 2.1E-10 T 28-03-2018 APY29_RS09090 a3addf7091bf30437cf7ad4f06121b67 592 Pfam PF00128 Alpha amylase, catalytic domain 118 439 3.2E-41 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APY29_RS09090 a3addf7091bf30437cf7ad4f06121b67 592 SUPERFAMILY SSF51445 66 482 1.21E-69 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS16840 d593111d91c70ab4e0cbe6545a36902b 199 PIRSF PIRSF028520 1 164 1.1E-83 T 28-03-2018 IPR016890 Uncharacterised conserved protein UCP028520 APY29_RS16840 d593111d91c70ab4e0cbe6545a36902b 199 SUPERFAMILY SSF55729 1 147 2.93E-15 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS16840 d593111d91c70ab4e0cbe6545a36902b 199 Gene3D G3DSA:3.40.630.30 1 164 1.8E-16 T 28-03-2018 APY29_RS16840 d593111d91c70ab4e0cbe6545a36902b 199 Pfam PF00583 Acetyltransferase (GNAT) family 27 125 3.5E-5 T 28-03-2018 IPR000182 GNAT domain GO:0008080 APY29_RS16730 f0cd4bd0c3f8b7eff9581704af71f64c 142 Pfam PF04314 Copper chaperone PCu(A)C 23 130 1.9E-29 T 28-03-2018 IPR007410 Copper chaperone PCuAC APY29_RS16730 f0cd4bd0c3f8b7eff9581704af71f64c 142 SUPERFAMILY SSF110087 3 140 5.75E-36 T 28-03-2018 IPR007410 Copper chaperone PCuAC APY29_RS20670 1071d75905dc0aa4819009a8ad7604be 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 3 142 7.0E-62 T 28-03-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS20670 1071d75905dc0aa4819009a8ad7604be 142 Pfam PF00572 Ribosomal protein L13 15 138 2.2E-53 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APY29_RS20670 1071d75905dc0aa4819009a8ad7604be 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 27.562 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APY29_RS20670 1071d75905dc0aa4819009a8ad7604be 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 28-03-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 APY29_RS20670 1071d75905dc0aa4819009a8ad7604be 142 Gene3D G3DSA:3.90.1180.10 1 142 1.2E-57 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APY29_RS20670 1071d75905dc0aa4819009a8ad7604be 142 PIRSF PIRSF002181 1 142 3.3E-49 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APY29_RS20670 1071d75905dc0aa4819009a8ad7604be 142 SUPERFAMILY SSF52161 1 140 8.11E-57 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APY29_RS14905 8a056eccd5a7da9babe67779e561434e 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 279 2.0E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS14905 8a056eccd5a7da9babe67779e561434e 289 SUPERFAMILY SSF161098 27 275 2.9E-30 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS14905 8a056eccd5a7da9babe67779e561434e 289 Gene3D G3DSA:1.10.3720.10 9 278 4.5E-31 T 28-03-2018 APY29_RS14905 8a056eccd5a7da9babe67779e561434e 289 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 19 284 1.3E-86 T 28-03-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 APY29_RS11425 694557ecd2869f43153ce17f11bc014f 194 Gene3D G3DSA:1.20.120.540 18 132 4.0E-14 T 28-03-2018 IPR027378 Cyclic nucleotide-regulated ion channel, N-terminal domain Reactome: R-HSA-159418|Reactome: R-HSA-879518 APY29_RS11425 694557ecd2869f43153ce17f11bc014f 194 SUPERFAMILY SSF103473 15 128 5.75E-19 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS11425 694557ecd2869f43153ce17f11bc014f 194 Pfam PF07690 Major Facilitator Superfamily 27 129 3.8E-11 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS02105 e1d11ad4a3439b1487e0ec27448b522f 297 SUPERFAMILY SSF110997 154 221 1.57E-5 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 APY29_RS02105 e1d11ad4a3439b1487e0ec27448b522f 297 Gene3D G3DSA:3.30.70.1070 144 222 4.2E-7 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 APY29_RS02105 e1d11ad4a3439b1487e0ec27448b522f 297 Gene3D G3DSA:3.30.70.1070 223 297 1.5E-4 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 APY29_RS02105 e1d11ad4a3439b1487e0ec27448b522f 297 Pfam PF05036 Sporulation related domain 188 257 8.6E-8 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 APY29_RS13465 cdf1189984c0a28f89eb9bc2b85b7c05 528 Pfam PF16370 C terminal of Calcineurin-like phosphoesterase 348 514 8.5E-38 T 28-03-2018 IPR032288 Calcineurin-like phosphoesterase, C-terminal APY29_RS13465 cdf1189984c0a28f89eb9bc2b85b7c05 528 Gene3D G3DSA:3.60.21.10 128 409 1.1E-26 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like APY29_RS13465 cdf1189984c0a28f89eb9bc2b85b7c05 528 Pfam PF00149 Calcineurin-like phosphoesterase 176 328 3.8E-5 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 APY29_RS13465 cdf1189984c0a28f89eb9bc2b85b7c05 528 Gene3D G3DSA:2.60.40.1120 19 88 0.007 T 28-03-2018 APY29_RS13465 cdf1189984c0a28f89eb9bc2b85b7c05 528 Pfam PF16371 N terminal of Calcineurin-like phosphoesterase 41 102 3.8E-10 T 28-03-2018 IPR032285 Calcineurin-like phosphoesterase, N-terminal APY29_RS13465 cdf1189984c0a28f89eb9bc2b85b7c05 528 SUPERFAMILY SSF56300 137 398 1.57E-31 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like APY29_RS21100 37135ec3ecc8d6d1b67ecad8e57eb264 212 TIGRFAM TIGR02557 HpaP: type III secretion protein HpaP 13 212 1.9E-84 T 28-03-2018 IPR013390 Type III secretion protein HpaP APY29_RS21100 37135ec3ecc8d6d1b67ecad8e57eb264 212 Pfam PF09483 Type III secretion protein (HpaP) 24 211 2.0E-38 T 28-03-2018 IPR013390 Type III secretion protein HpaP APY29_RS07820 0a737f19b8064b6989f4279755cd7980 209 Pfam PF07791 Protein of unknown function (DUF1629) 9 131 2.2E-36 T 28-03-2018 IPR012433 Protein of unknown function DUF1629 APY29_RS11420 c42b824d68997618d554234bed3fcf57 320 SMART SM01126 137 285 1.3E-45 T 28-03-2018 IPR024445 ISXO2-like transposase domain APY29_RS11420 c42b824d68997618d554234bed3fcf57 320 Pfam PF12762 ISXO2-like transposase domain 138 285 1.5E-31 T 28-03-2018 IPR024445 ISXO2-like transposase domain APY29_RS11420 c42b824d68997618d554234bed3fcf57 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 4.0E-10 T 28-03-2018 IPR024442 Transposase, zinc-ribbon APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Gene3D G3DSA:3.10.20.90 580 612 0.44 T 28-03-2018 APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Gene3D G3DSA:3.10.20.90 443 476 0.18 T 28-03-2018 APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Gene3D G3DSA:3.10.20.90 304 340 0.079 T 28-03-2018 APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Gene3D G3DSA:3.10.20.90 512 545 0.034 T 28-03-2018 APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Gene3D G3DSA:3.10.20.90 648 681 0.37 T 28-03-2018 APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Gene3D G3DSA:3.10.20.90 546 579 0.067 T 28-03-2018 APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Gene3D G3DSA:3.10.20.90 682 717 0.067 T 28-03-2018 APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Gene3D G3DSA:3.10.20.90 477 511 0.021 T 28-03-2018 APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Gene3D G3DSA:3.10.20.90 407 442 0.33 T 28-03-2018 APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Gene3D G3DSA:3.10.20.90 613 647 0.033 T 28-03-2018 APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Pfam PF03377 TAL effector repeat 629 660 3.2E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Pfam PF03377 TAL effector repeat 731 760 1.6E-9 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Pfam PF03377 TAL effector repeat 527 558 4.8E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Pfam PF03377 TAL effector repeat 561 592 1.3E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Pfam PF03377 TAL effector repeat 767 791 0.037 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Pfam PF03377 TAL effector repeat 425 456 3.9E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Pfam PF03377 TAL effector repeat 289 320 3.0E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Pfam PF03377 TAL effector repeat 357 388 4.8E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Pfam PF03377 TAL effector repeat 697 728 1.3E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Pfam PF03377 TAL effector repeat 595 626 3.9E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Pfam PF03377 TAL effector repeat 323 354 7.0E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Pfam PF03377 TAL effector repeat 459 490 4.2E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Pfam PF03377 TAL effector repeat 391 422 4.8E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Pfam PF03377 TAL effector repeat 493 524 2.5E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Pfam PF03377 TAL effector repeat 663 694 3.9E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS22455 62f176cc9364b81d4872519ce71bc5b9 1028 Gene3D G3DSA:3.40.47.10 341 405 0.14 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS05340 8fe6fec044ac8b5150dc451be5de8966 260 Pfam PF05137 Fimbrial assembly protein (PilN) 100 189 1.4E-27 T 28-03-2018 IPR007813 Fimbrial assembly PilN APY29_RS18490 8b68b533e02d074a5b662ce04847e9b0 301 SUPERFAMILY SSF63829 40 297 3.92E-58 T 28-03-2018 APY29_RS18490 8b68b533e02d074a5b662ce04847e9b0 301 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 78 281 1.5E-44 T 28-03-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region APY29_RS18490 8b68b533e02d074a5b662ce04847e9b0 301 Gene3D G3DSA:2.120.10.30 30 121 1.2E-8 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS18490 8b68b533e02d074a5b662ce04847e9b0 301 Gene3D G3DSA:2.120.10.30 122 300 1.0E-33 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS07345 8d00aea401c129fa7af6fceadbe5b6e9 275 Pfam PF11306 Protein of unknown function (DUF3108) 42 272 6.0E-31 T 28-03-2018 IPR021457 Protein of unknown function DUF3108 APY29_RS00740 dd815e5312b935f83fc90fe7f7529139 218 Gene3D G3DSA:3.40.50.150 4 216 2.0E-17 T 28-03-2018 APY29_RS00740 dd815e5312b935f83fc90fe7f7529139 218 Pfam PF06080 Protein of unknown function (DUF938) 6 213 3.7E-82 T 28-03-2018 IPR010342 Protein of unknown function DUF938 APY29_RS00740 dd815e5312b935f83fc90fe7f7529139 218 SUPERFAMILY SSF53335 5 211 1.02E-21 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS16015 5b8da629c87ea21292cd4d37125dd327 418 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 310 411 1.0E-13 T 28-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 APY29_RS16015 5b8da629c87ea21292cd4d37125dd327 418 SUPERFAMILY SSF81901 7 126 4.45E-11 T 28-03-2018 APY29_RS16015 5b8da629c87ea21292cd4d37125dd327 418 Gene3D G3DSA:2.60.40.1180 31 123 2.0E-9 T 28-03-2018 APY29_RS16015 5b8da629c87ea21292cd4d37125dd327 418 Gene3D G3DSA:2.60.40.1180 124 193 0.022 T 28-03-2018 APY29_RS16015 5b8da629c87ea21292cd4d37125dd327 418 Gene3D G3DSA:2.60.120.620 221 417 3.5E-31 T 28-03-2018 APY29_RS16015 5b8da629c87ea21292cd4d37125dd327 418 SMART SM00702 228 411 6.8E-36 T 28-03-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 APY29_RS16015 5b8da629c87ea21292cd4d37125dd327 418 SMART SM00671 156 191 45.0 T 28-03-2018 IPR006597 Sel1-like repeat APY29_RS16015 5b8da629c87ea21292cd4d37125dd327 418 SMART SM00671 50 85 10.0 T 28-03-2018 IPR006597 Sel1-like repeat APY29_RS16015 5b8da629c87ea21292cd4d37125dd327 418 SMART SM00671 18 49 32.0 T 28-03-2018 IPR006597 Sel1-like repeat APY29_RS16015 5b8da629c87ea21292cd4d37125dd327 418 SUPERFAMILY SSF81901 108 190 6.41E-5 T 28-03-2018 APY29_RS17930 245802e961753b40a5362c89d9cab0ea 127 Gene3D G3DSA:3.90.1030.10 1 117 2.1E-48 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS17930 245802e961753b40a5362c89d9cab0ea 127 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.193 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS17930 245802e961753b40a5362c89d9cab0ea 127 SUPERFAMILY SSF64263 1 119 3.66E-50 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS17930 245802e961753b40a5362c89d9cab0ea 127 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 4.5E-46 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS17930 245802e961753b40a5362c89d9cab0ea 127 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS17930 245802e961753b40a5362c89d9cab0ea 127 Pfam PF01196 Ribosomal protein L17 20 116 1.1E-32 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS04110 4962b666eb8e2652399c2b0cb418cac2 127 Pfam PF14346 Domain of unknown function (DUF4398) 20 117 2.4E-16 T 28-03-2018 IPR025511 Domain of unknown function DUF4398 APY29_RS06010 bd36c4cbe33e5c2d6f77fd591b2bf11d 455 Gene3D G3DSA:3.40.50.2000 1 245 6.1E-57 T 28-03-2018 APY29_RS06010 bd36c4cbe33e5c2d6f77fd591b2bf11d 455 Pfam PF00982 Glycosyltransferase family 20 16 453 4.9E-121 T 28-03-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 APY29_RS06010 bd36c4cbe33e5c2d6f77fd591b2bf11d 455 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 453 1.3E-181 T 28-03-2018 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 APY29_RS06010 bd36c4cbe33e5c2d6f77fd591b2bf11d 455 Gene3D G3DSA:3.40.50.2000 246 438 4.5E-39 T 28-03-2018 APY29_RS06010 bd36c4cbe33e5c2d6f77fd591b2bf11d 455 SUPERFAMILY SSF53756 2 454 1.0E-140 T 28-03-2018 APY29_RS04230 f62c235c3cd567aedfd49592b8f77383 248 PIRSF PIRSF000090 1 248 4.0E-81 T 28-03-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 APY29_RS04230 f62c235c3cd567aedfd49592b8f77383 248 Gene3D G3DSA:3.40.50.620 1 248 9.4E-77 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS04230 f62c235c3cd567aedfd49592b8f77383 248 Pfam PF01012 Electron transfer flavoprotein domain 26 206 1.0E-40 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 APY29_RS04230 f62c235c3cd567aedfd49592b8f77383 248 SUPERFAMILY SSF52402 1 244 4.4E-76 T 28-03-2018 APY29_RS04230 f62c235c3cd567aedfd49592b8f77383 248 SMART SM00893 23 211 3.5E-55 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 APY29_RS03645 71ff7a1bb660a94e3a7a8e99d33e9170 113 SUPERFAMILY SSF141488 31 105 1.22E-15 T 28-03-2018 IPR018660 C-type lysozyme inhibitor APY29_RS03645 71ff7a1bb660a94e3a7a8e99d33e9170 113 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 37 100 2.4E-9 T 28-03-2018 IPR018660 C-type lysozyme inhibitor APY29_RS17235 97ce623c0e821cdf516016ac36d82a75 890 SUPERFAMILY SSF55486 248 497 2.34E-71 T 28-03-2018 APY29_RS17235 97ce623c0e821cdf516016ac36d82a75 890 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 337 352 9.4E-24 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APY29_RS17235 97ce623c0e821cdf516016ac36d82a75 890 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 356 368 9.4E-24 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APY29_RS17235 97ce623c0e821cdf516016ac36d82a75 890 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 301 311 9.4E-24 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APY29_RS17235 97ce623c0e821cdf516016ac36d82a75 890 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 173 188 9.4E-24 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APY29_RS17235 97ce623c0e821cdf516016ac36d82a75 890 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 221 236 9.4E-24 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APY29_RS17235 97ce623c0e821cdf516016ac36d82a75 890 Pfam PF11838 ERAP1-like C-terminal domain 560 868 2.6E-40 T 28-03-2018 IPR024571 ERAP1-like C-terminal domain APY29_RS17235 97ce623c0e821cdf516016ac36d82a75 890 Pfam PF01433 Peptidase family M1 domain 249 474 6.7E-75 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APY29_RS17235 97ce623c0e821cdf516016ac36d82a75 890 Gene3D G3DSA:2.60.40.1730 26 239 7.4E-51 T 28-03-2018 APY29_RS17235 97ce623c0e821cdf516016ac36d82a75 890 SUPERFAMILY SSF63737 41 238 7.59E-50 T 28-03-2018 APY29_RS17235 97ce623c0e821cdf516016ac36d82a75 890 Gene3D G3DSA:1.10.390.10 323 490 5.1E-48 T 28-03-2018 APY29_RS10400 6a5a4d90b4325b0dc0cacf4b43aa2f82 637 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 53 636 3.5E-73 T 28-03-2018 IPR005674 CocE/Serine esterase GO:0016787 APY29_RS10400 6a5a4d90b4325b0dc0cacf4b43aa2f82 637 SUPERFAMILY SSF53474 43 404 6.55E-49 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS10400 6a5a4d90b4325b0dc0cacf4b43aa2f82 637 Gene3D G3DSA:2.60.120.260 399 637 2.0E-65 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS10400 6a5a4d90b4325b0dc0cacf4b43aa2f82 637 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 56 342 8.5E-76 T 28-03-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 APY29_RS10400 6a5a4d90b4325b0dc0cacf4b43aa2f82 637 Gene3D G3DSA:3.40.50.1820 28 398 6.1E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS10400 6a5a4d90b4325b0dc0cacf4b43aa2f82 637 SUPERFAMILY SSF49785 398 637 9.78E-73 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS10400 6a5a4d90b4325b0dc0cacf4b43aa2f82 637 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 384 632 3.4E-36 T 28-03-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 APY29_RS10400 6a5a4d90b4325b0dc0cacf4b43aa2f82 637 SMART SM00939 369 633 1.4E-81 T 28-03-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 APY29_RS08975 32332cad900bebe59ee29c275a459d13 348 SUPERFAMILY SSF54427 102 248 1.18E-33 T 28-03-2018 IPR032710 NTF2-like domain APY29_RS08975 32332cad900bebe59ee29c275a459d13 348 Pfam PF04335 VirB8 protein 26 246 6.6E-47 T 28-03-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 APY29_RS15660 26ad3c4d69c60ae09c0a8324d9e38a77 507 SMART SM00267 317 493 1.2E-51 T 28-03-2018 IPR000160 GGDEF domain APY29_RS15660 26ad3c4d69c60ae09c0a8324d9e38a77 507 Pfam PF00990 Diguanylate cyclase, GGDEF domain 328 489 1.7E-42 T 28-03-2018 IPR000160 GGDEF domain APY29_RS15660 26ad3c4d69c60ae09c0a8324d9e38a77 507 SUPERFAMILY SSF55073 333 494 4.39E-46 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS15660 26ad3c4d69c60ae09c0a8324d9e38a77 507 SUPERFAMILY SSF109604 4 269 1.07E-58 T 28-03-2018 APY29_RS15660 26ad3c4d69c60ae09c0a8324d9e38a77 507 Gene3D G3DSA:3.30.70.270 311 494 1.1E-53 T 28-03-2018 APY29_RS15660 26ad3c4d69c60ae09c0a8324d9e38a77 507 Gene3D G3DSA:1.10.3210.10 1 275 4.0E-40 T 28-03-2018 APY29_RS15660 26ad3c4d69c60ae09c0a8324d9e38a77 507 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 324 492 2.6E-48 T 28-03-2018 IPR000160 GGDEF domain APY29_RS15660 26ad3c4d69c60ae09c0a8324d9e38a77 507 Pfam PF08668 HDOD domain 15 207 3.3E-57 T 28-03-2018 IPR013976 Metal-dependent hydrolase HDOD APY29_RS03635 71fcb8e1a989c9f8045ed1fe2cf06014 383 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 14 64 2.4E-19 T 28-03-2018 IPR025713 Motility protein B, N-terminal domain APY29_RS03635 71fcb8e1a989c9f8045ed1fe2cf06014 383 Pfam PF00691 OmpA family 173 257 7.1E-13 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS03635 71fcb8e1a989c9f8045ed1fe2cf06014 383 SUPERFAMILY SSF103088 164 276 7.98E-20 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS03635 71fcb8e1a989c9f8045ed1fe2cf06014 383 Gene3D G3DSA:3.30.1330.60 120 299 8.1E-34 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS10030 c612a2e9a3cbf2b03b8ef6593e89c3e7 420 Pfam PF06057 Bacterial virulence protein (VirJ) 218 408 4.8E-84 T 28-03-2018 IPR010333 Bacterial virulence APY29_RS10030 c612a2e9a3cbf2b03b8ef6593e89c3e7 420 SUPERFAMILY SSF53474 39 193 4.71E-6 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS10030 c612a2e9a3cbf2b03b8ef6593e89c3e7 420 PIRSF PIRSF029063 2 169 1.4E-43 T 28-03-2018 IPR011225 Type IV secretory pathway, VirJ component APY29_RS10030 c612a2e9a3cbf2b03b8ef6593e89c3e7 420 PIRSF PIRSF029063 154 413 4.8E-113 T 28-03-2018 IPR011225 Type IV secretory pathway, VirJ component APY29_RS10030 c612a2e9a3cbf2b03b8ef6593e89c3e7 420 SUPERFAMILY SSF53474 213 404 8.28E-21 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS10030 c612a2e9a3cbf2b03b8ef6593e89c3e7 420 Gene3D G3DSA:3.40.50.1820 31 193 8.9E-6 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS10030 c612a2e9a3cbf2b03b8ef6593e89c3e7 420 Gene3D G3DSA:3.40.50.1820 194 396 2.6E-15 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS18020 0c14d1c3da4c1760e9edb9587ff534e5 137 SUPERFAMILY SSF54686 1 134 4.19E-54 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APY29_RS18020 0c14d1c3da4c1760e9edb9587ff534e5 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.6E-57 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS18020 0c14d1c3da4c1760e9edb9587ff534e5 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 28-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18020 0c14d1c3da4c1760e9edb9587ff534e5 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 28-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18020 0c14d1c3da4c1760e9edb9587ff534e5 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 4.9E-49 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APY29_RS18020 0c14d1c3da4c1760e9edb9587ff534e5 137 Gene3D G3DSA:3.90.1170.10 1 137 4.7E-49 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APY29_RS18020 0c14d1c3da4c1760e9edb9587ff534e5 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 2.7E-39 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS18020 0c14d1c3da4c1760e9edb9587ff534e5 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 2.7E-39 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS18020 0c14d1c3da4c1760e9edb9587ff534e5 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 2.7E-39 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS18020 0c14d1c3da4c1760e9edb9587ff534e5 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 2.7E-39 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS18020 0c14d1c3da4c1760e9edb9587ff534e5 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.58 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS02680 a4d29e7e1f2472742adeb0491eabc1f4 291 Gene3D G3DSA:1.10.287.70 4 74 7.4E-22 T 28-03-2018 APY29_RS02680 a4d29e7e1f2472742adeb0491eabc1f4 291 Gene3D G3DSA:1.20.120.80 75 291 2.5E-72 T 28-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02680 a4d29e7e1f2472742adeb0491eabc1f4 291 SUPERFAMILY SSF81452 9 291 4.5E-84 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02680 a4d29e7e1f2472742adeb0491eabc1f4 291 Pfam PF00510 Cytochrome c oxidase subunit III 10 112 4.1E-16 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS02680 a4d29e7e1f2472742adeb0491eabc1f4 291 Pfam PF00510 Cytochrome c oxidase subunit III 150 290 1.8E-44 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APY29_RS08990 8428bbfcdb1f8b1ed391cf083c581e38 352 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 34 343 9.1E-137 T 28-03-2018 IPR014155 Type IV secretion system protein VirB11 GO:0005737|GO:0006810|GO:0009405 APY29_RS08990 8428bbfcdb1f8b1ed391cf083c581e38 352 Gene3D G3DSA:3.30.450.90 22 124 3.0E-21 T 28-03-2018 APY29_RS08990 8428bbfcdb1f8b1ed391cf083c581e38 352 SUPERFAMILY SSF52540 6 331 4.54E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS08990 8428bbfcdb1f8b1ed391cf083c581e38 352 Pfam PF00437 Type II/IV secretion system protein 34 330 1.6E-54 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APY29_RS08990 8428bbfcdb1f8b1ed391cf083c581e38 352 Gene3D G3DSA:3.40.50.300 125 343 3.8E-16 T 28-03-2018 APY29_RS16005 76f2666c20d9d40e49a7b051b14b880c 206 Pfam PF01863 Protein of unknown function DUF45 135 194 3.7E-12 T 28-03-2018 IPR002725 Protein of unknown function DUF45 APY29_RS06595 102da52487da4f289d4660beef6e4b36 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 435 464 6.3E-19 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS06595 102da52487da4f289d4660beef6e4b36 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 541 570 6.3E-19 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS06595 102da52487da4f289d4660beef6e4b36 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 512 539 6.3E-19 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS06595 102da52487da4f289d4660beef6e4b36 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 459 642 3.2E-42 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS06595 102da52487da4f289d4660beef6e4b36 678 Gene3D G3DSA:1.10.287.950 448 678 3.0E-52 T 28-03-2018 APY29_RS06595 102da52487da4f289d4660beef6e4b36 678 Gene3D G3DSA:1.10.287.950 239 447 1.8E-4 T 28-03-2018 APY29_RS06595 102da52487da4f289d4660beef6e4b36 678 SMART SM00283 414 675 4.5E-86 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS06595 102da52487da4f289d4660beef6e4b36 678 SUPERFAMILY SSF58104 376 676 8.72E-69 T 28-03-2018 APY29_RS17925 5ee26c4a03860712140d71e51d615aa8 172 Pfam PF02600 Disulfide bond formation protein DsbB 9 160 1.6E-41 T 28-03-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 APY29_RS17925 5ee26c4a03860712140d71e51d615aa8 172 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 4 168 23.098 T 28-03-2018 IPR022920 Disulphide bond formation protein DsbB APY29_RS17925 5ee26c4a03860712140d71e51d615aa8 172 SUPERFAMILY SSF158442 12 161 4.84E-42 T 28-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain APY29_RS17925 5ee26c4a03860712140d71e51d615aa8 172 Gene3D G3DSA:1.20.1550.10 6 172 3.7E-44 T 28-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain APY29_RS05385 dca86a871b49c42e7151722d22684690 601 Gene3D G3DSA:1.25.40.10 356 441 4.5E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS05385 dca86a871b49c42e7151722d22684690 601 SUPERFAMILY SSF53300 99 274 3.84E-19 T 28-03-2018 IPR002035 von Willebrand factor, type A APY29_RS05385 dca86a871b49c42e7151722d22684690 601 Pfam PF00515 Tetratricopeptide repeat 391 421 1.8E-9 T 28-03-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 APY29_RS05385 dca86a871b49c42e7151722d22684690 601 Gene3D G3DSA:3.40.50.410 93 280 4.3E-19 T 28-03-2018 IPR002035 von Willebrand factor, type A APY29_RS05385 dca86a871b49c42e7151722d22684690 601 SUPERFAMILY SSF48452 363 435 7.96E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS05385 dca86a871b49c42e7151722d22684690 601 SMART SM00028 389 422 1.3E-6 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS05385 dca86a871b49c42e7151722d22684690 601 SMART SM00327 99 288 2.2E-10 T 28-03-2018 IPR002035 von Willebrand factor, type A APY29_RS05385 dca86a871b49c42e7151722d22684690 601 Pfam PF13519 von Willebrand factor type A domain 102 209 1.8E-11 T 28-03-2018 IPR002035 von Willebrand factor, type A APY29_RS05015 d6d62d43a820d3fd87759f0ac0492e30 923 Gene3D G3DSA:2.40.170.20 157 923 1.6E-71 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS05015 d6d62d43a820d3fd87759f0ac0492e30 923 Gene3D G3DSA:2.170.130.10 22 156 3.7E-33 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS05015 d6d62d43a820d3fd87759f0ac0492e30 923 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 155 5.1E-28 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS05015 d6d62d43a820d3fd87759f0ac0492e30 923 Pfam PF00593 TonB dependent receptor 346 920 2.6E-41 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS05015 d6d62d43a820d3fd87759f0ac0492e30 923 SUPERFAMILY SSF56935 19 215 1.76E-101 T 28-03-2018 APY29_RS05015 d6d62d43a820d3fd87759f0ac0492e30 923 SUPERFAMILY SSF56935 293 612 1.76E-101 T 28-03-2018 APY29_RS05015 d6d62d43a820d3fd87759f0ac0492e30 923 SUPERFAMILY SSF56935 673 719 1.76E-101 T 28-03-2018 APY29_RS05015 d6d62d43a820d3fd87759f0ac0492e30 923 SUPERFAMILY SSF56935 749 923 1.76E-101 T 28-03-2018 APY29_RS09190 63af987fe0894a5d2b6a318c989d8324 398 SUPERFAMILY SSF53756 80 371 1.94E-11 T 28-03-2018 APY29_RS09190 63af987fe0894a5d2b6a318c989d8324 398 Gene3D G3DSA:3.40.50.2000 207 361 3.4E-10 T 28-03-2018 APY29_RS10565 c80936cc10861c42e7f90e9f9543ec70 278 Gene3D G3DSA:1.10.3720.10 1 265 1.1E-44 T 28-03-2018 APY29_RS10565 c80936cc10861c42e7f90e9f9543ec70 278 SUPERFAMILY SSF161098 8 278 1.03E-72 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS10565 c80936cc10861c42e7f90e9f9543ec70 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 266 8.9E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS21790 1dd10a136d770bd0dda50ee10f2c1907 153 Pfam PF01047 MarR family 45 103 4.4E-15 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS21790 1dd10a136d770bd0dda50ee10f2c1907 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 98 114 3.8E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS21790 1dd10a136d770bd0dda50ee10f2c1907 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 78 3.8E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS21790 1dd10a136d770bd0dda50ee10f2c1907 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 94 3.8E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS21790 1dd10a136d770bd0dda50ee10f2c1907 153 SUPERFAMILY SSF46785 13 150 8.67E-35 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS21790 1dd10a136d770bd0dda50ee10f2c1907 153 SMART SM00347 38 138 3.1E-20 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APY29_RS21790 1dd10a136d770bd0dda50ee10f2c1907 153 Gene3D G3DSA:1.10.10.10 2 152 1.1E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS01815 71604a1d8bab77b880fe96d6cd223e61 312 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 184 297 9.7E-17 T 28-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 APY29_RS01815 71604a1d8bab77b880fe96d6cd223e61 312 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 155 1.9E-40 T 28-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 APY29_RS01815 71604a1d8bab77b880fe96d6cd223e61 312 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 301 2.9E-60 T 28-03-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 APY29_RS01815 71604a1d8bab77b880fe96d6cd223e61 312 SUPERFAMILY SSF48179 184 307 4.42E-23 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APY29_RS01815 71604a1d8bab77b880fe96d6cd223e61 312 Gene3D G3DSA:3.40.50.720 1 182 1.0E-33 T 28-03-2018 APY29_RS01815 71604a1d8bab77b880fe96d6cd223e61 312 SUPERFAMILY SSF51735 1 171 5.34E-14 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS01815 71604a1d8bab77b880fe96d6cd223e61 312 Gene3D G3DSA:1.10.1040.10 183 312 5.5E-22 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APY29_RS11850 1c7e48adfcd5e7ca754946305eb36a5f 272 Hamap MF_00548 Zinc transporter ZupT [zupT]. 9 268 34.295 T 28-03-2018 IPR023498 Zinc transporter ZupT APY29_RS11850 1c7e48adfcd5e7ca754946305eb36a5f 272 Pfam PF02535 ZIP Zinc transporter 10 105 2.5E-9 T 28-03-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 APY29_RS11850 1c7e48adfcd5e7ca754946305eb36a5f 272 Pfam PF02535 ZIP Zinc transporter 121 261 6.2E-20 T 28-03-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 APY29_RS10895 0c765859d8a492729c1156fd2f41ec52 654 Gene3D G3DSA:2.30.40.10 38 106 9.1E-21 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS10895 0c765859d8a492729c1156fd2f41ec52 654 Gene3D G3DSA:2.30.40.10 514 576 2.0E-4 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS10895 0c765859d8a492729c1156fd2f41ec52 654 Gene3D G3DSA:3.20.20.140 107 513 5.0E-37 T 28-03-2018 APY29_RS10895 0c765859d8a492729c1156fd2f41ec52 654 Pfam PF07969 Amidohydrolase family 87 571 1.1E-121 T 28-03-2018 IPR013108 Amidohydrolase 3 APY29_RS10895 0c765859d8a492729c1156fd2f41ec52 654 SUPERFAMILY SSF51338 530 574 2.12E-25 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS10895 0c765859d8a492729c1156fd2f41ec52 654 SUPERFAMILY SSF51338 34 99 2.12E-25 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS10895 0c765859d8a492729c1156fd2f41ec52 654 SUPERFAMILY SSF51556 98 160 8.96E-46 T 28-03-2018 IPR032466 Metal-dependent hydrolase APY29_RS10895 0c765859d8a492729c1156fd2f41ec52 654 SUPERFAMILY SSF51556 240 531 8.96E-46 T 28-03-2018 IPR032466 Metal-dependent hydrolase APY29_RS19075 7e8622a37759ec7249e13d00ec05d240 87 Pfam PF04999 Cell division protein FtsL 5 87 2.0E-24 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 APY29_RS19075 7e8622a37759ec7249e13d00ec05d240 87 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 4 85 3.0E-21 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 APY29_RS19075 7e8622a37759ec7249e13d00ec05d240 87 Hamap MF_00910 Cell division protein FtsL [ftsL]. 2 85 16.316 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 APY29_RS13400 2e28b963ae8c5c3d0c43e2a878916eb2 188 SMART SM00841 131 186 1.7E-24 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 APY29_RS13400 2e28b963ae8c5c3d0c43e2a878916eb2 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 2 60 1.2E-12 T 28-03-2018 IPR013185 Translation elongation factor, KOW-like APY29_RS13400 2e28b963ae8c5c3d0c43e2a878916eb2 188 Gene3D G3DSA:2.30.30.30 1 61 1.5E-14 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 APY29_RS13400 2e28b963ae8c5c3d0c43e2a878916eb2 188 SUPERFAMILY SSF50249 130 187 2.06E-15 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS13400 2e28b963ae8c5c3d0c43e2a878916eb2 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 123 4.5E-13 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 APY29_RS13400 2e28b963ae8c5c3d0c43e2a878916eb2 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 1 187 38.878 T 28-03-2018 IPR011897 Translation elongation factor P-like, YeiP APY29_RS13400 2e28b963ae8c5c3d0c43e2a878916eb2 188 SUPERFAMILY SSF50104 2 63 2.77E-9 T 28-03-2018 IPR008991 Translation protein SH3-like domain APY29_RS13400 2e28b963ae8c5c3d0c43e2a878916eb2 188 PIRSF PIRSF005901 1 188 9.0E-61 T 28-03-2018 IPR020599 Translation elongation factor P/YeiP APY29_RS13400 2e28b963ae8c5c3d0c43e2a878916eb2 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 2 187 6.2E-85 T 28-03-2018 IPR011897 Translation elongation factor P-like, YeiP APY29_RS13400 2e28b963ae8c5c3d0c43e2a878916eb2 188 SMART SM01185 68 123 4.2E-15 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 APY29_RS13400 2e28b963ae8c5c3d0c43e2a878916eb2 188 SUPERFAMILY SSF50249 68 128 5.14E-12 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS13400 2e28b963ae8c5c3d0c43e2a878916eb2 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.6E-20 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 APY29_RS13400 2e28b963ae8c5c3d0c43e2a878916eb2 188 Gene3D G3DSA:2.40.50.140 66 129 1.5E-14 T 28-03-2018 APY29_RS13400 2e28b963ae8c5c3d0c43e2a878916eb2 188 Gene3D G3DSA:2.40.50.140 131 186 4.2E-21 T 28-03-2018 APY29_RS13400 2e28b963ae8c5c3d0c43e2a878916eb2 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 28-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site APY29_RS08530 0a37318880f597092a0b7ab7cff293b1 384 Pfam PF09664 Protein of unknown function C-terminus (DUF2399) 225 375 1.5E-51 T 28-03-2018 IPR024465 Domain of unknown function DUF2399 APY29_RS08530 0a37318880f597092a0b7ab7cff293b1 384 Pfam PF11796 Protein of unknown function N-terminus (DUF3323) 4 203 3.5E-41 T 28-03-2018 IPR024466 Conserved hypothetical protein CHP02679, N terminus APY29_RS08530 0a37318880f597092a0b7ab7cff293b1 384 TIGRFAM TIGR02679 TIGR02679: TIGR02679 family protein 4 375 3.2E-111 T 28-03-2018 IPR013495 Conserved hypothetical protein CHP02679 APY29_RS08530 0a37318880f597092a0b7ab7cff293b1 384 Gene3D G3DSA:3.40.1360.10 225 368 1.5E-6 T 28-03-2018 APY29_RS13110 77d16e0c84c80ea3b6270ad6ba8e9463 911 Gene3D G3DSA:3.30.450.20 368 514 3.2E-11 T 28-03-2018 APY29_RS13110 77d16e0c84c80ea3b6270ad6ba8e9463 911 SUPERFAMILY SSF58104 573 854 2.22E-71 T 28-03-2018 APY29_RS13110 77d16e0c84c80ea3b6270ad6ba8e9463 911 Gene3D G3DSA:3.30.450.20 23 185 2.6E-17 T 28-03-2018 APY29_RS13110 77d16e0c84c80ea3b6270ad6ba8e9463 911 SMART SM00304 327 379 2.6E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13110 77d16e0c84c80ea3b6270ad6ba8e9463 911 SMART SM00304 553 605 3.8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13110 77d16e0c84c80ea3b6270ad6ba8e9463 911 SMART SM00283 606 853 6.2E-92 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS13110 77d16e0c84c80ea3b6270ad6ba8e9463 911 Pfam PF00672 HAMP domain 327 375 2.3E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13110 77d16e0c84c80ea3b6270ad6ba8e9463 911 Pfam PF02743 Cache domain 26 267 8.5E-16 T 28-03-2018 IPR033479 Double Cache domain 1 APY29_RS13110 77d16e0c84c80ea3b6270ad6ba8e9463 911 SUPERFAMILY SSF158472 327 378 4.32E-10 T 28-03-2018 APY29_RS13110 77d16e0c84c80ea3b6270ad6ba8e9463 911 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 666 820 3.6E-54 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS13110 77d16e0c84c80ea3b6270ad6ba8e9463 911 Gene3D G3DSA:1.10.287.950 545 656 2.2E-14 T 28-03-2018 APY29_RS13110 77d16e0c84c80ea3b6270ad6ba8e9463 911 Gene3D G3DSA:1.10.287.950 657 857 1.8E-48 T 28-03-2018 APY29_RS13110 77d16e0c84c80ea3b6270ad6ba8e9463 911 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 733 762 5.6E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13110 77d16e0c84c80ea3b6270ad6ba8e9463 911 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 627 656 5.6E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13110 77d16e0c84c80ea3b6270ad6ba8e9463 911 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 704 731 5.6E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13110 77d16e0c84c80ea3b6270ad6ba8e9463 911 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 781 810 5.6E-58 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APY29_RS13110 77d16e0c84c80ea3b6270ad6ba8e9463 911 Gene3D G3DSA:3.30.450.20 186 303 1.8E-16 T 28-03-2018 APY29_RS09805 a1b2ff3f52568fac66f53aa36fbd3036 502 Gene3D G3DSA:1.20.1600.10 26 499 2.8E-85 T 28-03-2018 APY29_RS09805 a1b2ff3f52568fac66f53aa36fbd3036 502 SUPERFAMILY SSF56954 7 36 3.4E-95 T 28-03-2018 APY29_RS09805 a1b2ff3f52568fac66f53aa36fbd3036 502 SUPERFAMILY SSF56954 65 496 3.4E-95 T 28-03-2018 APY29_RS09805 a1b2ff3f52568fac66f53aa36fbd3036 502 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 493 1.0E-83 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APY29_RS09805 a1b2ff3f52568fac66f53aa36fbd3036 502 Pfam PF02321 Outer membrane efflux protein 315 491 8.5E-26 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS09805 a1b2ff3f52568fac66f53aa36fbd3036 502 Pfam PF02321 Outer membrane efflux protein 74 282 5.7E-26 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS01900 3621b01ab348fb342bb232413b46cd48 337 Gene3D G3DSA:1.25.40.120 17 231 7.3E-4 T 28-03-2018 APY29_RS01900 3621b01ab348fb342bb232413b46cd48 337 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 264 335 1.9E-17 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 APY29_RS01900 3621b01ab348fb342bb232413b46cd48 337 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 262 333 2.3E-17 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 APY29_RS01900 3621b01ab348fb342bb232413b46cd48 337 SUPERFAMILY SSF74653 256 322 1.57E-19 T 28-03-2018 APY29_RS01900 3621b01ab348fb342bb232413b46cd48 337 PRINTS PR01374 Gram-negative bacterial tonB protein signature 279 297 3.1E-9 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 APY29_RS01900 3621b01ab348fb342bb232413b46cd48 337 PRINTS PR01374 Gram-negative bacterial tonB protein signature 298 315 3.1E-9 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 APY29_RS01900 3621b01ab348fb342bb232413b46cd48 337 PRINTS PR01374 Gram-negative bacterial tonB protein signature 258 279 3.1E-9 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 APY29_RS01900 3621b01ab348fb342bb232413b46cd48 337 Gene3D G3DSA:3.30.2420.10 267 335 1.0E-15 T 28-03-2018 APY29_RS10720 4447ebbb41a1a7c2e546de69b2625921 434 Pfam PF12146 Serine aminopeptidase, S33 95 220 4.3E-13 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 APY29_RS10720 4447ebbb41a1a7c2e546de69b2625921 434 SUPERFAMILY SSF53474 92 301 5.4E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS10720 4447ebbb41a1a7c2e546de69b2625921 434 Gene3D G3DSA:3.40.50.1820 84 316 5.1E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS11145 ab0c50b47284f8ee574de4c916d82723 354 SUPERFAMILY SSF51735 320 339 5.67E-27 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS11145 ab0c50b47284f8ee574de4c916d82723 354 SUPERFAMILY SSF51735 5 279 5.67E-27 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS11145 ab0c50b47284f8ee574de4c916d82723 354 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 208 7.6E-9 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 APY29_RS11145 ab0c50b47284f8ee574de4c916d82723 354 Gene3D G3DSA:3.40.50.720 1 354 2.3E-29 T 28-03-2018 APY29_RS05975 36183d4c32202571560b0fde0464cf0c 331 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS05975 36183d4c32202571560b0fde0464cf0c 331 SUPERFAMILY SSF55174 25 75 3.06E-5 T 28-03-2018 APY29_RS05975 36183d4c32202571560b0fde0464cf0c 331 Pfam PF00849 RNA pseudouridylate synthase 99 248 5.3E-34 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS05975 36183d4c32202571560b0fde0464cf0c 331 Gene3D G3DSA:3.10.290.10 13 82 1.0E-13 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS05975 36183d4c32202571560b0fde0464cf0c 331 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 22 319 1.8E-93 T 28-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS05975 36183d4c32202571560b0fde0464cf0c 331 Gene3D G3DSA:3.30.2350.10 89 322 4.4E-69 T 28-03-2018 APY29_RS05975 36183d4c32202571560b0fde0464cf0c 331 SUPERFAMILY SSF55120 84 321 4.52E-76 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APY29_RS13805 9a9f2695578cac7474ed37dbbf1cb08f 790 Gene3D G3DSA:2.70.98.50 46 414 2.3E-131 T 28-03-2018 APY29_RS13805 9a9f2695578cac7474ed37dbbf1cb08f 790 Gene3D G3DSA:2.60.40.1180 697 789 2.0E-36 T 28-03-2018 APY29_RS13805 9a9f2695578cac7474ed37dbbf1cb08f 790 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 47 281 3.1E-69 T 28-03-2018 IPR027414 Glycosyl hydrolase family 95, N-terminal domain KEGG: 00511+3.2.1.51 APY29_RS13805 9a9f2695578cac7474ed37dbbf1cb08f 790 SUPERFAMILY SSF48208 288 768 7.94E-85 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 APY29_RS13805 9a9f2695578cac7474ed37dbbf1cb08f 790 Gene3D G3DSA:1.50.10.10 415 696 3.3E-23 T 28-03-2018 APY29_RS13805 9a9f2695578cac7474ed37dbbf1cb08f 790 PIRSF PIRSF007663 18 790 7.3E-299 T 28-03-2018 IPR016518 Alpha-L-fucosidase GO:0004560 KEGG: 00511+3.2.1.51 APY29_RS21675 dd955f4374ec357b0c1f35425732f250 297 Gene3D G3DSA:3.40.190.10 179 268 3.4E-25 T 28-03-2018 APY29_RS21675 dd955f4374ec357b0c1f35425732f250 297 Gene3D G3DSA:1.10.10.10 2 86 2.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS21675 dd955f4374ec357b0c1f35425732f250 297 SUPERFAMILY SSF53850 92 294 1.12E-39 T 28-03-2018 APY29_RS21675 dd955f4374ec357b0c1f35425732f250 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 6.6E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS21675 dd955f4374ec357b0c1f35425732f250 297 Pfam PF03466 LysR substrate binding domain 90 294 3.8E-38 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS21675 dd955f4374ec357b0c1f35425732f250 297 Gene3D G3DSA:3.40.190.10 91 178 1.3E-13 T 28-03-2018 APY29_RS21675 dd955f4374ec357b0c1f35425732f250 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS21675 dd955f4374ec357b0c1f35425732f250 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS21675 dd955f4374ec357b0c1f35425732f250 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS21675 dd955f4374ec357b0c1f35425732f250 297 SUPERFAMILY SSF46785 5 114 3.11E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS11375 439b08a1753b56b30a79bb201a223d5d 464 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 48 457 2.8E-176 T 28-03-2018 IPR021204 Integrating conjugative element protein, PFL4711 APY29_RS17345 271a5ed34570b1def4b05cc027a679c4 298 SUPERFAMILY SSF51621 6 293 3.68E-98 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APY29_RS17345 271a5ed34570b1def4b05cc027a679c4 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 7 295 47.743 T 28-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 APY29_RS17345 271a5ed34570b1def4b05cc027a679c4 298 Gene3D G3DSA:3.20.20.60 6 298 1.4E-84 T 28-03-2018 APY29_RS17345 271a5ed34570b1def4b05cc027a679c4 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 10 294 5.4E-123 T 28-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 APY29_RS17345 271a5ed34570b1def4b05cc027a679c4 298 ProSitePatterns PS00161 Isocitrate lyase signature. 124 129 - T 28-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 APY29_RS17345 271a5ed34570b1def4b05cc027a679c4 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 13 257 1.7E-47 T 28-03-2018 APY29_RS22280 4034e1bd62975e7bf3cbad9e4485468b 211 SUPERFAMILY SSF48452 63 193 2.2E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS22280 4034e1bd62975e7bf3cbad9e4485468b 211 Gene3D G3DSA:1.25.20.10 3 194 7.8E-9 T 28-03-2018 APY29_RS05760 2001ca82814b18cd90a86407df406475 264 Gene3D G3DSA:3.20.20.70 7 264 1.5E-49 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS05760 2001ca82814b18cd90a86407df406475 264 Pfam PF05690 Thiazole biosynthesis protein ThiG 12 258 3.7E-112 T 28-03-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 APY29_RS05760 2001ca82814b18cd90a86407df406475 264 SUPERFAMILY SSF110399 8 250 9.29E-89 T 28-03-2018 APY29_RS05760 2001ca82814b18cd90a86407df406475 264 Hamap MF_00443 Thiazole synthase [thiG]. 9 264 42.72 T 28-03-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 APY29_RS09210 de597fe3ee0b04dd61220f05cd442fe6 342 Pfam PF01963 TraB family 57 340 1.5E-25 T 28-03-2018 IPR002816 Pheromone shutdown, TraB APY29_RS08170 ca801566f1eabaf7484eb93347698eb0 610 Gene3D G3DSA:3.40.50.300 348 605 4.1E-73 T 28-03-2018 APY29_RS08170 ca801566f1eabaf7484eb93347698eb0 610 SUPERFAMILY SSF90123 21 342 1.31E-51 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS08170 ca801566f1eabaf7484eb93347698eb0 610 Gene3D G3DSA:1.20.1560.10 14 347 3.9E-39 T 28-03-2018 APY29_RS08170 ca801566f1eabaf7484eb93347698eb0 610 SUPERFAMILY SSF52540 351 601 1.22E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS08170 ca801566f1eabaf7484eb93347698eb0 610 SMART SM00382 386 577 1.8E-20 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS08170 ca801566f1eabaf7484eb93347698eb0 610 Pfam PF00664 ABC transporter transmembrane region 41 303 2.5E-15 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS08170 ca801566f1eabaf7484eb93347698eb0 610 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS08170 ca801566f1eabaf7484eb93347698eb0 610 Pfam PF00005 ABC transporter 379 531 5.6E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS22820 a09b7643cb5bd7c39f9df8d3831b0bc1 326 Pfam PF00107 Zinc-binding dehydrogenase 151 266 1.1E-14 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APY29_RS22820 a09b7643cb5bd7c39f9df8d3831b0bc1 326 SUPERFAMILY SSF50129 1 144 2.74E-30 T 28-03-2018 IPR011032 GroES-like APY29_RS22820 a09b7643cb5bd7c39f9df8d3831b0bc1 326 Gene3D G3DSA:3.40.50.720 135 309 1.9E-21 T 28-03-2018 APY29_RS22820 a09b7643cb5bd7c39f9df8d3831b0bc1 326 Gene3D G3DSA:3.90.180.10 1 134 6.5E-31 T 28-03-2018 APY29_RS22820 a09b7643cb5bd7c39f9df8d3831b0bc1 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 89 2.9E-9 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APY29_RS22820 a09b7643cb5bd7c39f9df8d3831b0bc1 326 SMART SM00829 11 323 4.1E-6 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APY29_RS22820 a09b7643cb5bd7c39f9df8d3831b0bc1 326 SUPERFAMILY SSF51735 115 290 2.08E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS00170 4711945012840503f37f30074c98568d 106 Pfam PF08850 Domain of unknown function (DUF1820) 5 100 5.2E-37 T 28-03-2018 IPR014949 Protein of unknown function DUF1820 APY29_RS00170 4711945012840503f37f30074c98568d 106 PIRSF PIRSF028538 1 106 1.2E-49 T 28-03-2018 IPR014949 Protein of unknown function DUF1820 APY29_RS03170 1428dfe881ed81fb186053a8839efb11 1248 Gene3D G3DSA:3.40.50.300 29 261 1.3E-5 T 28-03-2018 APY29_RS10460 431d98f5619c2eae898188d4b906fb2a 200 Gene3D G3DSA:3.40.30.10 40 189 9.7E-24 T 28-03-2018 APY29_RS10460 431d98f5619c2eae898188d4b906fb2a 200 Pfam PF08534 Redoxin 49 171 1.7E-16 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 APY29_RS10460 431d98f5619c2eae898188d4b906fb2a 200 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 17 183 7.7E-52 T 28-03-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 APY29_RS10460 431d98f5619c2eae898188d4b906fb2a 200 ProSitePatterns PS00194 Thioredoxin family active site. 78 96 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 APY29_RS10460 431d98f5619c2eae898188d4b906fb2a 200 SUPERFAMILY SSF52833 43 183 1.21E-29 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS23680 244c191a725f445e49913c01b02518c6 97 Gene3D G3DSA:3.30.2310.20 1 91 6.1E-5 T 28-03-2018 APY29_RS23680 244c191a725f445e49913c01b02518c6 97 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 2 87 1.1E-8 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family APY29_RS23680 244c191a725f445e49913c01b02518c6 97 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 91 2.4E-15 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family APY29_RS07470 3405f882557317f1c081012d91206a26 414 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 225 244 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APY29_RS07470 3405f882557317f1c081012d91206a26 414 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 16 413 4.3E-172 T 28-03-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APY29_RS07470 3405f882557317f1c081012d91206a26 414 Gene3D G3DSA:3.90.1150.10 291 409 3.8E-41 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS07470 3405f882557317f1c081012d91206a26 414 Pfam PF00266 Aminotransferase class-V 34 402 1.4E-143 T 28-03-2018 IPR000192 Aminotransferase class V domain APY29_RS07470 3405f882557317f1c081012d91206a26 414 SUPERFAMILY SSF53383 13 411 4.59E-123 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS07470 3405f882557317f1c081012d91206a26 414 Gene3D G3DSA:3.40.640.10 44 290 1.8E-60 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS07470 3405f882557317f1c081012d91206a26 414 PIRSF PIRSF005572 31 412 2.0E-48 T 28-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APY29_RS01860 6f257ac8bd1b4654dfe2e2a0d8ec59fa 345 Gene3D G3DSA:3.30.70.1350 264 339 1.5E-4 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain APY29_RS01860 6f257ac8bd1b4654dfe2e2a0d8ec59fa 345 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 24 336 8.5E-67 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APY29_RS01860 6f257ac8bd1b4654dfe2e2a0d8ec59fa 345 Pfam PF01545 Cation efflux family 30 263 1.2E-37 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APY29_RS01860 6f257ac8bd1b4654dfe2e2a0d8ec59fa 345 SUPERFAMILY SSF161111 22 153 1.05E-50 T 28-03-2018 APY29_RS01860 6f257ac8bd1b4654dfe2e2a0d8ec59fa 345 SUPERFAMILY SSF161111 196 264 1.05E-50 T 28-03-2018 APY29_RS01860 6f257ac8bd1b4654dfe2e2a0d8ec59fa 345 Gene3D G3DSA:1.20.1510.10 22 263 2.1E-50 T 28-03-2018 APY29_RS16085 ef8e4f70aac439b6ebde509f2154e539 214 Pfam PF00149 Calcineurin-like phosphoesterase 29 128 2.4E-7 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 APY29_RS16085 ef8e4f70aac439b6ebde509f2154e539 214 Gene3D G3DSA:3.60.21.10 26 191 2.7E-12 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like APY29_RS16085 ef8e4f70aac439b6ebde509f2154e539 214 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 8 208 3.5E-55 T 28-03-2018 IPR026336 Metallophosphoesterase, DNA ligase-associated APY29_RS16085 ef8e4f70aac439b6ebde509f2154e539 214 SUPERFAMILY SSF56300 28 158 2.17E-13 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like APY29_RS16085 ef8e4f70aac439b6ebde509f2154e539 214 PIRSF PIRSF000887 7 210 5.0E-51 T 28-03-2018 IPR024173 Phosphoesterase, MJ0037 APY29_RS10440 498c1863000b3c20827d85080cd389d8 204 SMART SM00357 4 68 7.3E-6 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 APY29_RS10440 498c1863000b3c20827d85080cd389d8 204 Pfam PF00313 'Cold-shock' DNA-binding domain 5 66 2.3E-9 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APY29_RS10440 498c1863000b3c20827d85080cd389d8 204 Gene3D G3DSA:2.40.50.140 1 77 7.6E-16 T 28-03-2018 APY29_RS10440 498c1863000b3c20827d85080cd389d8 204 SUPERFAMILY SSF50249 1 67 4.16E-13 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS10440 498c1863000b3c20827d85080cd389d8 204 Pfam PF06961 Protein of unknown function (DUF1294) 117 171 1.1E-22 T 28-03-2018 IPR010718 Protein of unknown function DUF1294 APY29_RS22825 f383b5e03242c1bc483829f5a4927281 888 SUPERFAMILY SSF69593 324 543 7.06E-29 T 28-03-2018 APY29_RS22825 f383b5e03242c1bc483829f5a4927281 888 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 64 875 29.548 T 28-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 APY29_RS22825 f383b5e03242c1bc483829f5a4927281 888 Pfam PF01553 Acyltransferase 344 483 1.4E-23 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APY29_RS22825 f383b5e03242c1bc483829f5a4927281 888 Gene3D G3DSA:3.40.1130.10 299 572 7.0E-36 T 28-03-2018 APY29_RS22825 f383b5e03242c1bc483829f5a4927281 888 PIRSF PIRSF000437 73 886 0.0 T 28-03-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 APY29_RS22825 f383b5e03242c1bc483829f5a4927281 888 SMART SM00563 359 486 6.4E-29 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APY29_RS22825 f383b5e03242c1bc483829f5a4927281 888 PIRSF PIRSF500064 47 887 0.0 T 28-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 APY29_RS22825 f383b5e03242c1bc483829f5a4927281 888 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 69 871 0.0 T 28-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 APY29_RS08155 53a5b5257540e5c26c6691a881c63408 1019 Gene3D G3DSA:3.30.2090.10 707 795 2.5E-13 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS08155 53a5b5257540e5c26c6691a881c63408 1019 Gene3D G3DSA:3.30.2090.10 179 271 1.3E-11 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS08155 53a5b5257540e5c26c6691a881c63408 1019 SUPERFAMILY SSF82714 183 266 1.96E-8 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS08155 53a5b5257540e5c26c6691a881c63408 1019 Gene3D G3DSA:1.20.1640.10 798 1012 4.3E-39 T 28-03-2018 APY29_RS08155 53a5b5257540e5c26c6691a881c63408 1019 Gene3D G3DSA:1.20.1640.10 272 495 2.2E-37 T 28-03-2018 APY29_RS08155 53a5b5257540e5c26c6691a881c63408 1019 Gene3D G3DSA:3.30.70.1430 40 142 1.8E-21 T 28-03-2018 APY29_RS08155 53a5b5257540e5c26c6691a881c63408 1019 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.3E-24 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS08155 53a5b5257540e5c26c6691a881c63408 1019 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.3E-24 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS08155 53a5b5257540e5c26c6691a881c63408 1019 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 3.3E-24 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS08155 53a5b5257540e5c26c6691a881c63408 1019 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 3.3E-24 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS08155 53a5b5257540e5c26c6691a881c63408 1019 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 3.3E-24 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS08155 53a5b5257540e5c26c6691a881c63408 1019 PRINTS PR00702 Acriflavin resistance protein family signature 539 556 3.3E-24 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS08155 53a5b5257540e5c26c6691a881c63408 1019 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 3.3E-24 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS08155 53a5b5257540e5c26c6691a881c63408 1019 Gene3D G3DSA:3.30.70.1430 554 657 1.3E-4 T 28-03-2018 APY29_RS08155 53a5b5257540e5c26c6691a881c63408 1019 Pfam PF00873 AcrB/AcrD/AcrF family 6 1009 1.9E-154 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS08155 53a5b5257540e5c26c6691a881c63408 1019 SUPERFAMILY SSF82693 42 131 5.75E-14 T 28-03-2018 APY29_RS08155 53a5b5257540e5c26c6691a881c63408 1019 SUPERFAMILY SSF82866 294 493 1.7E-39 T 28-03-2018 APY29_RS08155 53a5b5257540e5c26c6691a881c63408 1019 SUPERFAMILY SSF82693 136 180 9.68E-16 T 28-03-2018 APY29_RS08155 53a5b5257540e5c26c6691a881c63408 1019 SUPERFAMILY SSF82693 272 324 9.68E-16 T 28-03-2018 APY29_RS08155 53a5b5257540e5c26c6691a881c63408 1019 SUPERFAMILY SSF82866 796 1014 1.83E-47 T 28-03-2018 APY29_RS08155 53a5b5257540e5c26c6691a881c63408 1019 SUPERFAMILY SSF82714 708 794 1.01E-11 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Gene3D G3DSA:3.40.47.10 263 371 0.021 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Pfam PF03377 TAL effector repeat 594 625 1.2E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Pfam PF03377 TAL effector repeat 798 829 4.6E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Pfam PF03377 TAL effector repeat 560 591 4.6E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Pfam PF03377 TAL effector repeat 628 659 1.2E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Pfam PF03377 TAL effector repeat 866 897 3.0E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Pfam PF03377 TAL effector repeat 288 319 4.6E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Pfam PF03377 TAL effector repeat 696 727 2.1E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Pfam PF03377 TAL effector repeat 936 960 0.044 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Pfam PF03377 TAL effector repeat 458 489 5.0E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Pfam PF03377 TAL effector repeat 832 863 3.0E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Pfam PF03377 TAL effector repeat 492 523 4.6E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Pfam PF03377 TAL effector repeat 662 693 3.0E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Pfam PF03377 TAL effector repeat 424 455 1.2E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Pfam PF03377 TAL effector repeat 526 557 3.0E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Pfam PF03377 TAL effector repeat 390 421 4.6E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Pfam PF03377 TAL effector repeat 900 929 2.5E-10 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Pfam PF03377 TAL effector repeat 730 761 3.0E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Pfam PF03377 TAL effector repeat 322 353 8.3E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Pfam PF03377 TAL effector repeat 764 795 3.4E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Pfam PF03377 TAL effector repeat 356 387 4.2E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Gene3D G3DSA:3.10.20.90 886 926 0.46 T 28-03-2018 APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Gene3D G3DSA:3.10.20.90 408 442 0.048 T 28-03-2018 APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Gene3D G3DSA:3.10.20.90 477 509 0.44 T 28-03-2018 APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Gene3D G3DSA:3.10.20.90 613 647 0.055 T 28-03-2018 APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Gene3D G3DSA:3.10.20.90 851 885 0.036 T 28-03-2018 APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Gene3D G3DSA:3.10.20.90 681 714 0.023 T 28-03-2018 APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Gene3D G3DSA:3.10.20.90 814 850 0.025 T 28-03-2018 APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Gene3D G3DSA:3.10.20.90 372 407 0.39 T 28-03-2018 APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Gene3D G3DSA:3.10.20.90 443 476 0.24 T 28-03-2018 APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Gene3D G3DSA:3.10.20.90 578 612 0.048 T 28-03-2018 APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Gene3D G3DSA:3.10.20.90 715 746 0.028 T 28-03-2018 APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Gene3D G3DSA:3.10.20.90 510 543 0.024 T 28-03-2018 APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Gene3D G3DSA:3.10.20.90 544 577 0.4 T 28-03-2018 APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Gene3D G3DSA:3.10.20.90 648 680 0.031 T 28-03-2018 APY29_RS23415 af4a5edb3ca2be720fe92acac3087c9e 1197 Gene3D G3DSA:3.40.47.10 747 813 0.1 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS13155 e7a1d4f5eecb957d7544ff6e73f9d84e 753 SMART SM00304 214 266 6.9E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13155 e7a1d4f5eecb957d7544ff6e73f9d84e 753 SMART SM00304 395 447 22.0 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13155 e7a1d4f5eecb957d7544ff6e73f9d84e 753 SUPERFAMILY SSF158472 214 265 1.7E-10 T 28-03-2018 APY29_RS13155 e7a1d4f5eecb957d7544ff6e73f9d84e 753 SMART SM00283 448 695 1.7E-85 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS13155 e7a1d4f5eecb957d7544ff6e73f9d84e 753 Gene3D G3DSA:1.10.287.500 221 421 0.11 T 28-03-2018 APY29_RS13155 e7a1d4f5eecb957d7544ff6e73f9d84e 753 Gene3D G3DSA:1.10.287.950 507 699 5.9E-49 T 28-03-2018 APY29_RS13155 e7a1d4f5eecb957d7544ff6e73f9d84e 753 SUPERFAMILY SSF58104 234 268 5.23E-5 T 28-03-2018 APY29_RS13155 e7a1d4f5eecb957d7544ff6e73f9d84e 753 SUPERFAMILY SSF58104 324 393 5.23E-5 T 28-03-2018 APY29_RS13155 e7a1d4f5eecb957d7544ff6e73f9d84e 753 Gene3D G3DSA:1.20.120.30 28 186 3.1E-9 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain APY29_RS13155 e7a1d4f5eecb957d7544ff6e73f9d84e 753 Gene3D G3DSA:1.10.287.1060 422 506 0.045 T 28-03-2018 APY29_RS13155 e7a1d4f5eecb957d7544ff6e73f9d84e 753 SUPERFAMILY SSF58104 415 697 2.62E-71 T 28-03-2018 APY29_RS13155 e7a1d4f5eecb957d7544ff6e73f9d84e 753 Pfam PF12729 Four helix bundle sensory module for signal transduction 9 182 7.7E-18 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain APY29_RS13155 e7a1d4f5eecb957d7544ff6e73f9d84e 753 Pfam PF00672 HAMP domain 214 262 2.3E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APY29_RS13155 e7a1d4f5eecb957d7544ff6e73f9d84e 753 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 509 662 1.0E-52 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APY29_RS06415 6cdfb1be5ff4daaf30543e63be65d528 208 Pfam PF01810 LysE type translocator 16 201 5.6E-43 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 APY29_RS20410 48789371a94f706534a4cec4019b9286 111 Gene3D G3DSA:3.30.70.120 6 111 1.9E-34 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APY29_RS20410 48789371a94f706534a4cec4019b9286 111 SUPERFAMILY SSF54913 7 108 1.0E-33 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta APY29_RS20410 48789371a94f706534a4cec4019b9286 111 Pfam PF03091 CutA1 divalent ion tolerance protein 10 104 8.1E-32 T 28-03-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 APY29_RS13460 47a0a4423674c733a959f4e4fc51f315 358 Pfam PF01650 Peptidase C13 family 74 284 1.3E-49 T 28-03-2018 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 APY29_RS13460 47a0a4423674c733a959f4e4fc51f315 358 Gene3D G3DSA:3.40.50.1460 78 287 5.3E-20 T 28-03-2018 APY29_RS13460 47a0a4423674c733a959f4e4fc51f315 358 SUPERFAMILY SSF52129 128 237 1.36E-5 T 28-03-2018 IPR029030 Caspase-like domain APY29_RS21410 af48cc12273f64d6c31d416b4d13fb50 138 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 8 74 6.7E-14 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APY29_RS21410 af48cc12273f64d6c31d416b4d13fb50 138 Pfam PF00589 Phage integrase family 71 118 5.8E-5 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS21410 af48cc12273f64d6c31d416b4d13fb50 138 Gene3D G3DSA:1.10.150.130 5 86 1.2E-6 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal APY29_RS21410 af48cc12273f64d6c31d416b4d13fb50 138 SUPERFAMILY SSF56349 9 111 2.86E-5 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APY29_RS04490 60af1078c1972adc862afd9a05f954ee 283 PIRSF PIRSF002786 1 279 1.4E-54 T 28-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 APY29_RS04490 60af1078c1972adc862afd9a05f954ee 283 Pfam PF03934 Type II secretion system (T2SS), protein K 31 254 1.6E-46 T 28-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 APY29_RS04490 60af1078c1972adc862afd9a05f954ee 283 SUPERFAMILY SSF158544 95 192 3.66E-23 T 28-03-2018 APY29_RS04490 60af1078c1972adc862afd9a05f954ee 283 Gene3D G3DSA:1.10.40.60 29 195 3.1E-20 T 28-03-2018 APY29_RS18745 3adde836d82956a10577032d2f4fc551 233 SUPERFAMILY SSF52266 33 232 7.61E-45 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain APY29_RS18745 3adde836d82956a10577032d2f4fc551 233 Gene3D G3DSA:3.40.50.1110 21 233 2.2E-26 T 28-03-2018 APY29_RS18745 3adde836d82956a10577032d2f4fc551 233 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 72 221 3.6E-14 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain APY29_RS06640 24ac749070b09a4dd0314be109d44f54 243 SUPERFAMILY SSF110395 6 241 1.18E-66 T 28-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 APY29_RS06640 24ac749070b09a4dd0314be109d44f54 243 Pfam PF03932 CutC family 6 204 2.2E-81 T 28-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 APY29_RS06640 24ac749070b09a4dd0314be109d44f54 243 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 4 241 38.931 T 28-03-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 APY29_RS06640 24ac749070b09a4dd0314be109d44f54 243 Gene3D G3DSA:3.20.20.380 3 243 2.8E-82 T 28-03-2018 APY29_RS11835 252f5a710a2f4d5865b38cda95c1537b 1220 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 10 420 4.2E-163 T 28-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 APY29_RS11835 252f5a710a2f4d5865b38cda95c1537b 1220 Gene3D G3DSA:2.40.50.140 29 120 8.9E-31 T 28-03-2018 APY29_RS11835 252f5a710a2f4d5865b38cda95c1537b 1220 Pfam PF10150 Ribonuclease E/G family 117 386 9.9E-96 T 28-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 APY29_RS11835 252f5a710a2f4d5865b38cda95c1537b 1220 Hamap MF_00970 Ribonuclease E [rne]. 1 1203 35.384 T 28-03-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 APY29_RS11835 252f5a710a2f4d5865b38cda95c1537b 1220 Pfam PF00575 S1 RNA binding domain 33 114 3.4E-12 T 28-03-2018 IPR003029 S1 domain GO:0003676 APY29_RS11835 252f5a710a2f4d5865b38cda95c1537b 1220 SUPERFAMILY SSF50249 37 121 3.23E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS11835 252f5a710a2f4d5865b38cda95c1537b 1220 SMART SM00316 34 115 3.0E-10 T 28-03-2018 IPR022967 RNA-binding domain, S1 APY29_RS12910 8204a96f8e7d2c457e7885956e8d5f37 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 86 105 2.4E-21 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 APY29_RS12910 8204a96f8e7d2c457e7885956e8d5f37 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 187 209 2.4E-21 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 APY29_RS12910 8204a96f8e7d2c457e7885956e8d5f37 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 209 228 2.4E-21 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 APY29_RS12910 8204a96f8e7d2c457e7885956e8d5f37 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 27 48 2.4E-21 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 APY29_RS12910 8204a96f8e7d2c457e7885956e8d5f37 263 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 20 261 6.9E-58 T 28-03-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 APY29_RS12910 8204a96f8e7d2c457e7885956e8d5f37 263 Pfam PF01311 Bacterial export proteins, family 1 20 253 9.9E-58 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 APY29_RS06130 38f082dedb18a8e816d853b9a0507059 491 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 252 435 3.9E-57 T 28-03-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 APY29_RS06130 38f082dedb18a8e816d853b9a0507059 491 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 486 210.479 T 28-03-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 APY29_RS06130 38f082dedb18a8e816d853b9a0507059 491 Gene3D G3DSA:3.40.50.300 1 240 1.2E-53 T 28-03-2018 APY29_RS06130 38f082dedb18a8e816d853b9a0507059 491 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 6 476 2.0E-140 T 28-03-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 APY29_RS06130 38f082dedb18a8e816d853b9a0507059 491 Gene3D G3DSA:3.40.50.880 241 483 1.7E-28 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS06130 38f082dedb18a8e816d853b9a0507059 491 SUPERFAMILY SSF52317 253 445 4.25E-41 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS06130 38f082dedb18a8e816d853b9a0507059 491 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 231 1.2E-21 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain APY29_RS06130 38f082dedb18a8e816d853b9a0507059 491 SUPERFAMILY SSF52540 1 242 1.27E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS20070 944cd2ba9ad31d8ce86da6b6e7cc6cf0 775 SUPERFAMILY SSF53474 503 758 4.19E-56 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS20070 944cd2ba9ad31d8ce86da6b6e7cc6cf0 775 Gene3D G3DSA:2.140.10.30 52 493 7.9E-57 T 28-03-2018 APY29_RS20070 944cd2ba9ad31d8ce86da6b6e7cc6cf0 775 Gene3D G3DSA:3.40.50.1820 494 772 3.0E-38 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS20070 944cd2ba9ad31d8ce86da6b6e7cc6cf0 775 Pfam PF00326 Prolyl oligopeptidase family 562 758 6.7E-47 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APY29_RS20070 944cd2ba9ad31d8ce86da6b6e7cc6cf0 775 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 119 472 5.0E-70 T 28-03-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 APY29_RS20070 944cd2ba9ad31d8ce86da6b6e7cc6cf0 775 SUPERFAMILY SSF82171 272 493 7.32E-37 T 28-03-2018 APY29_RS20070 944cd2ba9ad31d8ce86da6b6e7cc6cf0 775 SUPERFAMILY SSF82171 155 241 7.32E-37 T 28-03-2018 APY29_RS20070 944cd2ba9ad31d8ce86da6b6e7cc6cf0 775 SUPERFAMILY SSF82171 62 97 7.32E-37 T 28-03-2018 APY29_RS14620 c5dadbc5e39e171f4df27c44e0dc67ae 243 Hamap MF_00509 Cell division protein ZipA [zipA]. 5 227 17.716 T 28-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 APY29_RS14620 c5dadbc5e39e171f4df27c44e0dc67ae 243 SMART SM00771 95 225 1.5E-55 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 APY29_RS14620 c5dadbc5e39e171f4df27c44e0dc67ae 243 SUPERFAMILY SSF64383 94 232 1.03E-36 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 APY29_RS14620 c5dadbc5e39e171f4df27c44e0dc67ae 243 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 37 225 8.4E-69 T 28-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 APY29_RS14620 c5dadbc5e39e171f4df27c44e0dc67ae 243 Gene3D G3DSA:3.30.1400.10 96 228 1.6E-39 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 APY29_RS14620 c5dadbc5e39e171f4df27c44e0dc67ae 243 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 98 226 9.0E-70 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 APY29_RS14620 c5dadbc5e39e171f4df27c44e0dc67ae 243 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 98 223 1.9E-37 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 APY29_RS16845 82413d4132307a45c515ddb6bef744ab 247 Gene3D G3DSA:2.160.20.70 127 247 1.7E-30 T 28-03-2018 APY29_RS16845 82413d4132307a45c515ddb6bef744ab 247 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 8 111 1.2E-19 T 28-03-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 APY29_RS16845 82413d4132307a45c515ddb6bef744ab 247 SUPERFAMILY SSF63848 143 246 1.28E-29 T 28-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 APY29_RS16845 82413d4132307a45c515ddb6bef744ab 247 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 145 243 4.6E-30 T 28-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 APY29_RS16845 82413d4132307a45c515ddb6bef744ab 247 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 12 246 2.2E-69 T 28-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 APY29_RS16845 82413d4132307a45c515ddb6bef744ab 247 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 11 247 26.584 T 28-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 APY29_RS10180 5f3d9965e376734b35f8a91df805ef84 306 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 38 285 1.4E-45 T 28-03-2018 APY29_RS10180 5f3d9965e376734b35f8a91df805ef84 306 SUPERFAMILY SSF53850 31 279 9.56E-20 T 28-03-2018 APY29_RS10180 5f3d9965e376734b35f8a91df805ef84 306 Gene3D G3DSA:3.40.190.10 125 284 1.6E-19 T 28-03-2018 APY29_RS08860 ca6f2c8fb0d8837961b481bf3f99a6c1 89 Pfam PF03966 Trm112p-like protein 2 68 3.8E-8 T 28-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 APY29_RS08860 ca6f2c8fb0d8837961b481bf3f99a6c1 89 SUPERFAMILY SSF158997 52 80 3.4E-7 T 28-03-2018 APY29_RS08860 ca6f2c8fb0d8837961b481bf3f99a6c1 89 SUPERFAMILY SSF158997 1 24 3.4E-7 T 28-03-2018 APY29_RS08860 ca6f2c8fb0d8837961b481bf3f99a6c1 89 Gene3D G3DSA:2.20.25.10 8 88 5.1E-10 T 28-03-2018 APY29_RS16770 0ce92197f3cbda3d972bf1fd15f1a34c 442 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 76 422 2.1E-26 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS16770 0ce92197f3cbda3d972bf1fd15f1a34c 442 Gene3D G3DSA:3.60.10.10 58 441 4.6E-20 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS16770 0ce92197f3cbda3d972bf1fd15f1a34c 442 SUPERFAMILY SSF56219 381 440 6.91E-21 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS16770 0ce92197f3cbda3d972bf1fd15f1a34c 442 SUPERFAMILY SSF56219 177 354 6.91E-21 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS16770 0ce92197f3cbda3d972bf1fd15f1a34c 442 SUPERFAMILY SSF56219 72 144 6.91E-21 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS07035 1d0fa4873f2ae5c163493fe4d51d70fd 360 Pfam PF07885 Ion channel 47 101 4.5E-10 T 28-03-2018 IPR013099 Potassium channel domain APY29_RS07035 1d0fa4873f2ae5c163493fe4d51d70fd 360 SUPERFAMILY SSF81324 5 144 7.72E-14 T 28-03-2018 APY29_RS07035 1d0fa4873f2ae5c163493fe4d51d70fd 360 Gene3D G3DSA:3.40.50.720 112 234 3.5E-8 T 28-03-2018 APY29_RS07035 1d0fa4873f2ae5c163493fe4d51d70fd 360 Gene3D G3DSA:1.10.287.70 3 110 2.6E-11 T 28-03-2018 APY29_RS07035 1d0fa4873f2ae5c163493fe4d51d70fd 360 SUPERFAMILY SSF51735 121 230 1.28E-6 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS12380 467e74e6e257a0d4a34ca03c6e421ebb 72 SUPERFAMILY SSF47598 4 45 3.0E-5 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 APY29_RS12380 467e74e6e257a0d4a34ca03c6e421ebb 72 Gene3D G3DSA:1.10.1220.10 2 49 4.0E-6 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APY29_RS07650 c3a439c530210e3978b492cbcf251ab6 335 Pfam PF00107 Zinc-binding dehydrogenase 170 295 4.3E-31 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APY29_RS07650 c3a439c530210e3978b492cbcf251ab6 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 5.6E-7 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APY29_RS07650 c3a439c530210e3978b492cbcf251ab6 335 Gene3D G3DSA:3.90.180.10 1 335 1.2E-71 T 28-03-2018 APY29_RS07650 c3a439c530210e3978b492cbcf251ab6 335 SUPERFAMILY SSF50129 1 164 1.23E-30 T 28-03-2018 IPR011032 GroES-like APY29_RS07650 c3a439c530210e3978b492cbcf251ab6 335 SUPERFAMILY SSF51735 136 307 2.71E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS07650 c3a439c530210e3978b492cbcf251ab6 335 SMART SM00829 13 333 1.7E-19 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APY29_RS08775 186814b120e4b8d28036af0145a6bacf 363 Pfam PF00146 NADH dehydrogenase 31 351 3.2E-117 T 28-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08775 186814b120e4b8d28036af0145a6bacf 363 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 229 242 - T 28-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08775 186814b120e4b8d28036af0145a6bacf 363 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 24 357 24.037 T 28-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS09505 6dbe0342cab4b514564dd57e009e025a 94 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APY29_RS09505 6dbe0342cab4b514564dd57e009e025a 94 Gene3D G3DSA:3.30.70.20 3 51 2.5E-12 T 28-03-2018 APY29_RS09505 6dbe0342cab4b514564dd57e009e025a 94 Gene3D G3DSA:3.30.70.20 52 80 0.13 T 28-03-2018 APY29_RS09505 6dbe0342cab4b514564dd57e009e025a 94 SUPERFAMILY SSF54862 6 72 2.25E-18 T 28-03-2018 APY29_RS09505 6dbe0342cab4b514564dd57e009e025a 94 Pfam PF00037 4Fe-4S binding domain 5 25 5.4E-6 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APY29_RS00455 466da56cd41178694ad5bb668581861a 376 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 5 130 1.6E-11 T 28-03-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 APY29_RS00455 466da56cd41178694ad5bb668581861a 376 SUPERFAMILY SSF51735 2 143 1.42E-15 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS00455 466da56cd41178694ad5bb668581861a 376 Gene3D G3DSA:3.40.50.720 1 162 1.6E-19 T 28-03-2018 APY29_RS05610 44925595341b73d502d5d85f1f757706 536 Pfam PF03929 PepSY-associated TM region 26 476 1.9E-65 T 28-03-2018 IPR005625 PepSY-associated TM protein APY29_RS05610 44925595341b73d502d5d85f1f757706 536 Gene3D G3DSA:1.20.950.20 163 297 9.8E-4 T 28-03-2018 APY29_RS06565 b7b9e6299d37db85b00464c6e215b88a 305 SUPERFAMILY SSF101478 9 300 7.45E-80 T 28-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 APY29_RS06565 b7b9e6299d37db85b00464c6e215b88a 305 Gene3D G3DSA:1.10.4080.10 3 304 1.7E-89 T 28-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 APY29_RS06565 b7b9e6299d37db85b00464c6e215b88a 305 Pfam PF03747 ADP-ribosylglycohydrolase 13 278 7.2E-69 T 28-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 APY29_RS04045 e42d503a512c4c9111e926d57cb2ae85 128 Pfam PF04994 TfoX C-terminal domain 5 78 1.7E-26 T 28-03-2018 IPR007077 TfoX, C-terminal APY29_RS04045 e42d503a512c4c9111e926d57cb2ae85 128 Gene3D G3DSA:1.10.150.20 4 79 2.8E-21 T 28-03-2018 APY29_RS14480 63cc9c0dad3a39bc205c0855cab5479c 155 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 75 152 3.8E-16 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 APY29_RS14480 63cc9c0dad3a39bc205c0855cab5479c 155 SUPERFAMILY SSF74653 73 151 6.02E-18 T 28-03-2018 APY29_RS14480 63cc9c0dad3a39bc205c0855cab5479c 155 Gene3D G3DSA:3.30.1150.10 22 155 8.9E-19 T 28-03-2018 APY29_RS14480 63cc9c0dad3a39bc205c0855cab5479c 155 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 75 152 5.1E-18 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 APY29_RS00460 300e89b4b924a4e5bf0c57d48d65d6c3 261 SUPERFAMILY SSF55144 27 259 1.74E-51 T 28-03-2018 IPR009097 Cyclic phosphodiesterase APY29_RS00460 300e89b4b924a4e5bf0c57d48d65d6c3 261 Gene3D G3DSA:3.90.1140.10 14 261 1.9E-50 T 28-03-2018 APY29_RS00460 300e89b4b924a4e5bf0c57d48d65d6c3 261 PIRSF PIRSF033949 1 261 1.0E-108 T 28-03-2018 IPR012390 Phosphoesterase SP1827 APY29_RS00460 300e89b4b924a4e5bf0c57d48d65d6c3 261 Pfam PF08975 Domain of unknown function (DUF1868) 42 156 2.6E-31 T 28-03-2018 IPR015069 Domain of unknown function DUF1868 APY29_RS19510 e6c09a5625b57e856f320b5221837002 885 Gene3D G3DSA:2.170.130.10 45 174 5.7E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS19510 e6c09a5625b57e856f320b5221837002 885 Gene3D G3DSA:2.40.170.20 264 885 1.9E-53 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS19510 e6c09a5625b57e856f320b5221837002 885 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 169 6.6E-10 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS19510 e6c09a5625b57e856f320b5221837002 885 Pfam PF00593 TonB dependent receptor 370 883 3.3E-24 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS19510 e6c09a5625b57e856f320b5221837002 885 SUPERFAMILY SSF56935 55 192 2.29E-73 T 28-03-2018 APY29_RS19510 e6c09a5625b57e856f320b5221837002 885 SUPERFAMILY SSF56935 263 885 2.29E-73 T 28-03-2018 APY29_RS23345 969ff03bfeb04a5cd843912f4da3045c 574 Pfam PF02096 60Kd inner membrane protein 380 558 2.3E-54 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APY29_RS23345 969ff03bfeb04a5cd843912f4da3045c 574 Pfam PF14849 YidC periplasmic domain 91 369 3.5E-64 T 28-03-2018 IPR028053 Membrane insertase YidC, N-terminal APY29_RS23345 969ff03bfeb04a5cd843912f4da3045c 574 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 379 558 1.4E-64 T 28-03-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal APY29_RS23345 969ff03bfeb04a5cd843912f4da3045c 574 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 561 22.176 T 28-03-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 APY29_RS23345 969ff03bfeb04a5cd843912f4da3045c 574 PRINTS PR01900 YidC translocation/secretion protein signature 494 509 1.9E-17 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APY29_RS23345 969ff03bfeb04a5cd843912f4da3045c 574 PRINTS PR01900 YidC translocation/secretion protein signature 514 538 1.9E-17 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APY29_RS23345 969ff03bfeb04a5cd843912f4da3045c 574 PRINTS PR01900 YidC translocation/secretion protein signature 365 381 1.9E-17 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APY29_RS23345 969ff03bfeb04a5cd843912f4da3045c 574 PRINTS PR00701 60kDa inner membrane protein signature 2 23 2.9E-51 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APY29_RS23345 969ff03bfeb04a5cd843912f4da3045c 574 PRINTS PR00701 60kDa inner membrane protein signature 441 464 2.9E-51 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APY29_RS23345 969ff03bfeb04a5cd843912f4da3045c 574 PRINTS PR00701 60kDa inner membrane protein signature 240 258 2.9E-51 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APY29_RS23345 969ff03bfeb04a5cd843912f4da3045c 574 PRINTS PR00701 60kDa inner membrane protein signature 488 510 2.9E-51 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APY29_RS23345 969ff03bfeb04a5cd843912f4da3045c 574 PRINTS PR00701 60kDa inner membrane protein signature 274 289 2.9E-51 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APY29_RS23345 969ff03bfeb04a5cd843912f4da3045c 574 PRINTS PR00701 60kDa inner membrane protein signature 525 548 2.9E-51 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APY29_RS23345 969ff03bfeb04a5cd843912f4da3045c 574 PRINTS PR00701 60kDa inner membrane protein signature 184 204 2.9E-51 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APY29_RS23345 969ff03bfeb04a5cd843912f4da3045c 574 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 377 2.2E-67 T 28-03-2018 IPR028053 Membrane insertase YidC, N-terminal APY29_RS13000 f6a5156037cd8597f45bdef4954b4021 119 Gene3D G3DSA:3.30.1190.10 29 85 4.7E-6 T 28-03-2018 APY29_RS13000 f6a5156037cd8597f45bdef4954b4021 119 Pfam PF01381 Helix-turn-helix 8 55 1.4E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APY29_RS13000 f6a5156037cd8597f45bdef4954b4021 119 SMART SM00530 7 63 7.2E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APY29_RS13000 f6a5156037cd8597f45bdef4954b4021 119 Gene3D G3DSA:1.10.10.60 3 28 4.4E-9 T 28-03-2018 APY29_RS13000 f6a5156037cd8597f45bdef4954b4021 119 SUPERFAMILY SSF47413 3 65 6.86E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APY29_RS12190 5b7319d764e759d07da9cc4c23a330d5 515 SUPERFAMILY SSF56784 431 476 1.49E-11 T 28-03-2018 IPR023214 HAD-like domain APY29_RS12190 5b7319d764e759d07da9cc4c23a330d5 515 SUPERFAMILY SSF56784 189 283 1.49E-11 T 28-03-2018 IPR023214 HAD-like domain APY29_RS12190 5b7319d764e759d07da9cc4c23a330d5 515 SUPERFAMILY SSF56784 327 392 1.49E-11 T 28-03-2018 IPR023214 HAD-like domain APY29_RS12190 5b7319d764e759d07da9cc4c23a330d5 515 Gene3D G3DSA:3.40.50.1000 165 475 2.6E-12 T 28-03-2018 IPR023214 HAD-like domain APY29_RS12190 5b7319d764e759d07da9cc4c23a330d5 515 Pfam PF13419 Haloacid dehalogenase-like hydrolase 328 386 1.0E-6 T 28-03-2018 IPR023214 HAD-like domain APY29_RS06510 649bc08b0750e912bdd1ae81e082716b 250 Pfam PF03070 TENA/THI-4/PQQC family 12 222 1.5E-59 T 28-03-2018 IPR004305 Thiaminase-2/PQQC APY29_RS06510 649bc08b0750e912bdd1ae81e082716b 250 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 6 242 1.6E-127 T 28-03-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 APY29_RS06510 649bc08b0750e912bdd1ae81e082716b 250 Gene3D G3DSA:1.20.910.10 1 233 1.1E-27 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 APY29_RS06510 649bc08b0750e912bdd1ae81e082716b 250 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 250 117.884 T 28-03-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 APY29_RS06510 649bc08b0750e912bdd1ae81e082716b 250 SUPERFAMILY SSF48613 5 231 2.47E-61 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 APY29_RS06760 f841fd1534f0eda163a7c050dee09074 244 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 17 244 9.1E-61 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APY29_RS06760 f841fd1534f0eda163a7c050dee09074 244 Pfam PF04452 RNA methyltransferase 18 238 4.2E-73 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APY29_RS06760 f841fd1534f0eda163a7c050dee09074 244 SUPERFAMILY SSF75217 74 244 4.1E-50 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases APY29_RS06760 f841fd1534f0eda163a7c050dee09074 244 PIRSF PIRSF015601 5 244 1.6E-59 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APY29_RS06760 f841fd1534f0eda163a7c050dee09074 244 Gene3D G3DSA:3.40.1280.10 1 244 2.8E-78 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APY29_RS06760 f841fd1534f0eda163a7c050dee09074 244 SUPERFAMILY SSF88697 3 69 8.95E-15 T 28-03-2018 IPR015947 PUA-like domain APY29_RS23585 98d6d5e9d84feb603aeb46118ef10dbc 224 Gene3D G3DSA:3.40.50.1010 1 214 1.5E-27 T 28-03-2018 IPR029060 PIN domain-like APY29_RS23585 98d6d5e9d84feb603aeb46118ef10dbc 224 Pfam PF01936 NYN domain 98 192 9.5E-10 T 28-03-2018 IPR021139 NYN domain, limkain-b1-type APY29_RS02170 83c1ca66744f876bf3fb14fc99279654 44 Gene3D G3DSA:3.40.190.10 1 39 2.6E-4 T 28-03-2018 APY29_RS02170 83c1ca66744f876bf3fb14fc99279654 44 Pfam PF08085 Entericidin EcnA/B family 22 42 5.0E-9 T 28-03-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 APY29_RS05045 08d4270b830e5d4bd7e63f24f9936ccf 371 SUPERFAMILY SSF52172 1 131 3.42E-11 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS05045 08d4270b830e5d4bd7e63f24f9936ccf 371 Gene3D G3DSA:3.40.50.2300 1 119 1.2E-8 T 28-03-2018 APY29_RS05045 08d4270b830e5d4bd7e63f24f9936ccf 371 Pfam PF08668 HDOD domain 140 315 9.8E-28 T 28-03-2018 IPR013976 Metal-dependent hydrolase HDOD APY29_RS05045 08d4270b830e5d4bd7e63f24f9936ccf 371 Gene3D G3DSA:1.10.3210.10 120 363 2.9E-30 T 28-03-2018 APY29_RS05045 08d4270b830e5d4bd7e63f24f9936ccf 371 SUPERFAMILY SSF109604 129 340 2.86E-39 T 28-03-2018 APY29_RS05045 08d4270b830e5d4bd7e63f24f9936ccf 371 PIRSF PIRSF036883 1 369 3.4E-169 T 28-03-2018 IPR014626 Signal transduction response regulator with modified HD-GYP domain, putative APY29_RS00160 cc91f1fc4393c261557c4d935c9be394 337 SUPERFAMILY SSF56935 29 335 4.12E-60 T 28-03-2018 APY29_RS00160 cc91f1fc4393c261557c4d935c9be394 337 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 20 332 1.8E-90 T 28-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) APY29_RS00160 cc91f1fc4393c261557c4d935c9be394 337 Gene3D G3DSA:2.40.160.60 28 336 5.7E-47 T 28-03-2018 APY29_RS05190 067c055b25f071ccd18f9f2cf4a7431e 293 Pfam PF13369 Transglutaminase-like superfamily 60 209 5.7E-45 T 28-03-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 APY29_RS05190 067c055b25f071ccd18f9f2cf4a7431e 293 Gene3D G3DSA:1.25.40.10 24 288 4.1E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS05190 067c055b25f071ccd18f9f2cf4a7431e 293 SUPERFAMILY SSF48452 204 278 2.95E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS05190 067c055b25f071ccd18f9f2cf4a7431e 293 Pfam PF13371 Tetratricopeptide repeat 211 282 6.2E-19 T 28-03-2018 APY29_RS11095 5c53b67d4ecfa53a6e2ff361d745f4d0 88 Pfam PF07896 Protein of unknown function (DUF1674) 50 88 1.3E-16 T 28-03-2018 IPR012875 Protein of unknown function DUF1674 APY29_RS20600 ab1f45c5e021571c9071bf3930fc9fba 420 Gene3D G3DSA:3.40.50.1820 19 420 2.8E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS20600 ab1f45c5e021571c9071bf3930fc9fba 420 Pfam PF03583 Secretory lipase 132 207 9.9E-8 T 28-03-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 APY29_RS20600 ab1f45c5e021571c9071bf3930fc9fba 420 PIRSF PIRSF029171 1 420 5.9E-99 T 28-03-2018 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 APY29_RS20600 ab1f45c5e021571c9071bf3930fc9fba 420 SUPERFAMILY SSF53474 129 387 1.33E-18 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS17990 1953bc0195e93e3e9135a0c85e546a51 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.258 T 28-03-2018 IPR023036 Ribosomal protein S14, bacterial/plastid APY29_RS17990 1953bc0195e93e3e9135a0c85e546a51 101 SUPERFAMILY SSF57716 2 101 1.07E-34 T 28-03-2018 APY29_RS17990 1953bc0195e93e3e9135a0c85e546a51 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.9E-23 T 28-03-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS17990 1953bc0195e93e3e9135a0c85e546a51 101 Gene3D G3DSA:4.10.830.10 1 101 6.1E-31 T 28-03-2018 APY29_RS07310 a4d2b6259c593f0ca74891a25fab19f3 191 Gene3D G3DSA:2.60.450.10 86 190 0.006 T 28-03-2018 APY29_RS07310 a4d2b6259c593f0ca74891a25fab19f3 191 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 14 186 5.3E-41 T 28-03-2018 IPR010664 Lipopolysaccharide assembly, LptC-related APY29_RS07310 a4d2b6259c593f0ca74891a25fab19f3 191 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 2 188 22.217 T 28-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 APY29_RS07310 a4d2b6259c593f0ca74891a25fab19f3 191 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 10 185 1.5E-47 T 28-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 APY29_RS20695 98a87bc285c8cae5cfcd39d469fff758 238 SUPERFAMILY SSF56784 13 215 6.75E-21 T 28-03-2018 IPR023214 HAD-like domain APY29_RS20695 98a87bc285c8cae5cfcd39d469fff758 238 Pfam PF12710 haloacid dehalogenase-like hydrolase 15 197 1.4E-25 T 28-03-2018 APY29_RS20695 98a87bc285c8cae5cfcd39d469fff758 238 Gene3D G3DSA:3.40.50.1000 5 218 1.9E-16 T 28-03-2018 IPR023214 HAD-like domain APY29_RS10800 cf0037ee8d3dd0a7fae434612e2e533c 427 Pfam PF03743 Bacterial conjugation TrbI-like protein 233 413 5.0E-58 T 28-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Gene3D G3DSA:3.40.47.10 611 658 0.014 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Gene3D G3DSA:3.10.20.90 444 476 0.39 T 28-03-2018 APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Gene3D G3DSA:3.10.20.90 339 374 0.081 T 28-03-2018 APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Gene3D G3DSA:3.10.20.90 477 514 0.058 T 28-03-2018 APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Gene3D G3DSA:3.10.20.90 410 443 0.026 T 28-03-2018 APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Gene3D G3DSA:3.10.20.90 375 409 0.021 T 28-03-2018 APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Gene3D G3DSA:3.10.20.90 659 682 0.023 T 28-03-2018 APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Gene3D G3DSA:3.10.20.90 716 757 0.29 T 28-03-2018 APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Gene3D G3DSA:3.10.20.90 683 715 0.093 T 28-03-2018 APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Gene3D G3DSA:3.10.20.90 543 579 0.054 T 28-03-2018 APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Gene3D G3DSA:3.10.20.90 580 610 0.023 T 28-03-2018 APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Gene3D G3DSA:3.40.47.10 247 337 0.043 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Pfam PF03377 TAL effector repeat 561 592 2.1E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Pfam PF03377 TAL effector repeat 495 524 2.3E-15 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Pfam PF03377 TAL effector repeat 697 728 2.8E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Pfam PF03377 TAL effector repeat 527 558 2.8E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Pfam PF03377 TAL effector repeat 459 490 3.9E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Pfam PF03377 TAL effector repeat 289 320 2.5E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Pfam PF03377 TAL effector repeat 767 791 0.037 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Pfam PF03377 TAL effector repeat 357 388 7.0E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Pfam PF03377 TAL effector repeat 391 422 2.5E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Pfam PF03377 TAL effector repeat 629 660 2.5E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Pfam PF03377 TAL effector repeat 425 456 2.5E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Pfam PF03377 TAL effector repeat 731 760 2.1E-10 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Pfam PF03377 TAL effector repeat 663 694 2.5E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Pfam PF03377 TAL effector repeat 323 354 3.0E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23430 3ae42abe72b80305f784f2e0de89433d 1028 Pfam PF03377 TAL effector repeat 595 626 2.5E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS09640 b29c289b0e6efa964e42f4bd550d4eb0 318 Gene3D G3DSA:3.40.1190.20 46 318 1.9E-35 T 28-03-2018 IPR029056 Ribokinase-like APY29_RS09640 b29c289b0e6efa964e42f4bd550d4eb0 318 PIRSF PIRSF000535 2 317 1.1E-104 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APY29_RS09640 b29c289b0e6efa964e42f4bd550d4eb0 318 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 6 314 1.5E-90 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APY29_RS09640 b29c289b0e6efa964e42f4bd550d4eb0 318 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 254 267 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APY29_RS09640 b29c289b0e6efa964e42f4bd550d4eb0 318 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 6 314 5.4E-89 T 28-03-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 APY29_RS09640 b29c289b0e6efa964e42f4bd550d4eb0 318 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APY29_RS09640 b29c289b0e6efa964e42f4bd550d4eb0 318 Pfam PF00294 pfkB family carbohydrate kinase 10 301 1.0E-56 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB APY29_RS09640 b29c289b0e6efa964e42f4bd550d4eb0 318 SUPERFAMILY SSF53613 6 298 2.03E-59 T 28-03-2018 IPR029056 Ribokinase-like APY29_RS09640 b29c289b0e6efa964e42f4bd550d4eb0 318 Gene3D G3DSA:2.20.150.10 12 45 5.1E-15 T 28-03-2018 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain APY29_RS10880 d266dd36ead28d9b1304bf436df1fed5 52 TIGRFAM TIGR03510 XapX: XapX domain 5 50 8.4E-14 T 28-03-2018 IPR020017 XapX domain APY29_RS12565 58807b355cbfea064d2dfafade30ece6 785 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 31 204 6.9E-40 T 28-03-2018 IPR025199 DNA translocase FtsK, 4TM region APY29_RS12565 58807b355cbfea064d2dfafade30ece6 785 SMART SM00843 718 783 1.7E-40 T 28-03-2018 IPR018541 FtsK gamma domain APY29_RS12565 58807b355cbfea064d2dfafade30ece6 785 Pfam PF01580 FtsK/SpoIIIE family 394 607 3.7E-64 T 28-03-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 APY29_RS12565 58807b355cbfea064d2dfafade30ece6 785 Gene3D G3DSA:1.10.10.10 720 774 3.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS12565 58807b355cbfea064d2dfafade30ece6 785 SUPERFAMILY SSF46785 718 783 4.24E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS12565 58807b355cbfea064d2dfafade30ece6 785 Pfam PF09397 Ftsk gamma domain 720 780 2.7E-27 T 28-03-2018 IPR018541 FtsK gamma domain APY29_RS12565 58807b355cbfea064d2dfafade30ece6 785 SUPERFAMILY SSF52540 366 679 5.8E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS12565 58807b355cbfea064d2dfafade30ece6 785 Gene3D G3DSA:3.40.50.300 215 645 1.6E-53 T 28-03-2018 APY29_RS12565 58807b355cbfea064d2dfafade30ece6 785 SMART SM00382 429 628 0.0077 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS13280 f82a3708bd739eeedd090212f858752b 315 PIRSF PIRSF031767 10 315 2.0E-128 T 28-03-2018 IPR012379 LytTR MHYE transcriptional regulator, putative APY29_RS13280 f82a3708bd739eeedd090212f858752b 315 SMART SM00850 205 302 4.1E-32 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 APY29_RS13280 f82a3708bd739eeedd090212f858752b 315 Gene3D G3DSA:2.40.50.40 195 264 1.1E-16 T 28-03-2018 APY29_RS13280 f82a3708bd739eeedd090212f858752b 315 Pfam PF04397 LytTr DNA-binding domain 208 300 5.5E-25 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 APY29_RS08400 88feb24b17f336cfb119d4606f842637 278 Gene3D G3DSA:3.40.50.150 5 258 6.6E-22 T 28-03-2018 APY29_RS08400 88feb24b17f336cfb119d4606f842637 278 Pfam PF13649 Methyltransferase domain 94 186 1.9E-13 T 28-03-2018 APY29_RS08400 88feb24b17f336cfb119d4606f842637 278 SUPERFAMILY SSF53335 81 254 2.86E-24 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS20910 c45342e1c16e6f6e50762b3a4887b403 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 7.5E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20910 c45342e1c16e6f6e50762b3a4887b403 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 7.5E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20910 c45342e1c16e6f6e50762b3a4887b403 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 7.5E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20910 c45342e1c16e6f6e50762b3a4887b403 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 7.5E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20910 c45342e1c16e6f6e50762b3a4887b403 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 7.5E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20910 c45342e1c16e6f6e50762b3a4887b403 268 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 179 0.006 T 28-03-2018 APY29_RS20910 c45342e1c16e6f6e50762b3a4887b403 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 2.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20910 c45342e1c16e6f6e50762b3a4887b403 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 2.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20910 c45342e1c16e6f6e50762b3a4887b403 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 2.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20910 c45342e1c16e6f6e50762b3a4887b403 268 SUPERFAMILY SSF51735 4 257 5.75E-62 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS20910 c45342e1c16e6f6e50762b3a4887b403 268 Pfam PF00106 short chain dehydrogenase 6 187 3.8E-51 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS20910 c45342e1c16e6f6e50762b3a4887b403 268 Gene3D G3DSA:3.40.50.720 2 252 5.0E-59 T 28-03-2018 APY29_RS10595 2c807cd81fd11499d8dbc43f48d926cc 347 SUPERFAMILY SSF55909 4 342 5.4E-112 T 28-03-2018 APY29_RS10595 2c807cd81fd11499d8dbc43f48d926cc 347 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 9 341 5.9E-108 T 28-03-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 APY29_RS10595 2c807cd81fd11499d8dbc43f48d926cc 347 Gene3D G3DSA:3.75.10.10 4 347 2.6E-117 T 28-03-2018 APY29_RS10645 27781957fb25189b820a544ddb0bea96 612 SUPERFAMILY SSF51735 262 529 9.72E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS10645 27781957fb25189b820a544ddb0bea96 612 SUPERFAMILY SSF53335 89 309 4.15E-12 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS10645 27781957fb25189b820a544ddb0bea96 612 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 262 431 0.002 T 28-03-2018 APY29_RS10645 27781957fb25189b820a544ddb0bea96 612 Gene3D G3DSA:3.40.50.720 257 584 6.7E-66 T 28-03-2018 APY29_RS10645 27781957fb25189b820a544ddb0bea96 612 Pfam PF02719 Polysaccharide biosynthesis protein 264 546 1.2E-111 T 28-03-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain APY29_RS10645 27781957fb25189b820a544ddb0bea96 612 Gene3D G3DSA:3.40.50.720 120 245 2.2E-24 T 28-03-2018 APY29_RS10645 27781957fb25189b820a544ddb0bea96 612 Pfam PF13727 CoA-binding domain 45 219 3.7E-14 T 28-03-2018 APY29_RS10135 53ae2907071319faacb3b6700a4de5ea 186 SUPERFAMILY SSF53271 21 178 2.23E-46 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like APY29_RS10135 53ae2907071319faacb3b6700a4de5ea 186 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 21 184 2.7E-61 T 28-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 APY29_RS10135 53ae2907071319faacb3b6700a4de5ea 186 Gene3D G3DSA:3.40.50.2020 12 182 2.3E-39 T 28-03-2018 APY29_RS10135 53ae2907071319faacb3b6700a4de5ea 186 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 18 186 34.058 T 28-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 APY29_RS10135 53ae2907071319faacb3b6700a4de5ea 186 Pfam PF00156 Phosphoribosyl transferase domain 64 167 7.8E-18 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 APY29_RS07300 c82b34f22b01237e3a6ffb775a5a4925 239 SMART SM00382 26 229 1.2E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS07300 c82b34f22b01237e3a6ffb775a5a4925 239 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 2 239 2.2E-115 T 28-03-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 APY29_RS07300 c82b34f22b01237e3a6ffb775a5a4925 239 Pfam PF00005 ABC transporter 18 164 1.1E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS07300 c82b34f22b01237e3a6ffb775a5a4925 239 SUPERFAMILY SSF52540 2 235 1.93E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS07300 c82b34f22b01237e3a6ffb775a5a4925 239 Gene3D G3DSA:3.40.50.300 1 235 1.7E-61 T 28-03-2018 APY29_RS07300 c82b34f22b01237e3a6ffb775a5a4925 239 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 213 234 4.7E-6 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APY29_RS22350 a6c82eb31d7255db97a9d35370c41597 345 SUPERFAMILY SSF52151 41 296 3.4E-56 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APY29_RS22350 a6c82eb31d7255db97a9d35370c41597 345 Pfam PF01734 Patatin-like phospholipase 51 207 6.1E-27 T 28-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 APY29_RS22350 a6c82eb31d7255db97a9d35370c41597 345 Gene3D G3DSA:3.40.1090.10 35 342 9.9E-42 T 28-03-2018 APY29_RS09605 8882dd8f03b9472853d3e20fa24ccd99 212 Pfam PF07791 Protein of unknown function (DUF1629) 11 132 3.3E-47 T 28-03-2018 IPR012433 Protein of unknown function DUF1629 APY29_RS20255 9510ae91261fa541ce544cfda02e83b4 306 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 10 279 3.4E-116 T 28-03-2018 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 APY29_RS20255 9510ae91261fa541ce544cfda02e83b4 306 Gene3D G3DSA:3.90.226.10 3 293 1.8E-35 T 28-03-2018 APY29_RS20255 9510ae91261fa541ce544cfda02e83b4 306 Pfam PF01039 Carboxyl transferase domain 17 197 2.5E-18 T 28-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 APY29_RS20255 9510ae91261fa541ce544cfda02e83b4 306 SUPERFAMILY SSF52096 6 232 1.61E-34 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS15835 4e646cff5f463e18f3c9a2a12a72b7b8 196 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 182 4.1E-27 T 28-03-2018 APY29_RS15835 4e646cff5f463e18f3c9a2a12a72b7b8 196 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 185 7.1E-21 T 28-03-2018 APY29_RS15835 4e646cff5f463e18f3c9a2a12a72b7b8 196 SUPERFAMILY SSF56784 2 186 3.97E-22 T 28-03-2018 IPR023214 HAD-like domain APY29_RS15835 4e646cff5f463e18f3c9a2a12a72b7b8 196 Gene3D G3DSA:3.40.50.1000 1 189 4.5E-10 T 28-03-2018 IPR023214 HAD-like domain APY29_RS11225 f8882fe5b5c4ded3ab928b20103f85eb 97 Pfam PF01381 Helix-turn-helix 30 77 6.2E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APY29_RS11225 f8882fe5b5c4ded3ab928b20103f85eb 97 SUPERFAMILY SSF47413 26 86 4.22E-13 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APY29_RS11225 f8882fe5b5c4ded3ab928b20103f85eb 97 SMART SM00530 30 83 1.2E-4 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APY29_RS11225 f8882fe5b5c4ded3ab928b20103f85eb 97 Gene3D G3DSA:1.10.260.40 13 93 4.0E-14 T 28-03-2018 APY29_RS22245 d0b37fa82e120393c3df95497e448af2 142 Gene3D G3DSA:3.10.129.10 2 142 7.3E-26 T 28-03-2018 APY29_RS22245 d0b37fa82e120393c3df95497e448af2 142 SUPERFAMILY SSF54637 11 139 1.63E-31 T 28-03-2018 IPR029069 HotDog domain APY29_RS22245 d0b37fa82e120393c3df95497e448af2 142 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 135 3.3E-39 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 APY29_RS22245 d0b37fa82e120393c3df95497e448af2 142 Pfam PF03061 Thioesterase superfamily 50 127 1.3E-14 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 APY29_RS05175 001f9b368d9949967b32ed2a64922a55 484 SUPERFAMILY SSF56935 5 106 1.07E-27 T 28-03-2018 APY29_RS05175 001f9b368d9949967b32ed2a64922a55 484 SUPERFAMILY SSF56935 238 282 1.07E-27 T 28-03-2018 APY29_RS05175 001f9b368d9949967b32ed2a64922a55 484 SUPERFAMILY SSF56935 321 364 1.07E-27 T 28-03-2018 APY29_RS05175 001f9b368d9949967b32ed2a64922a55 484 SUPERFAMILY SSF56935 398 484 1.07E-27 T 28-03-2018 APY29_RS05175 001f9b368d9949967b32ed2a64922a55 484 SUPERFAMILY SSF56935 133 182 1.07E-27 T 28-03-2018 APY29_RS05175 001f9b368d9949967b32ed2a64922a55 484 Gene3D G3DSA:2.40.170.20 2 484 6.8E-38 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS22540 85053578e7a5f2ba7e0ca84f06b11463 75 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 5.8E-23 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 APY29_RS22540 85053578e7a5f2ba7e0ca84f06b11463 75 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 69 21.868 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 APY29_RS22540 85053578e7a5f2ba7e0ca84f06b11463 75 Pfam PF02416 mttA/Hcf106 family 5 48 9.9E-15 T 28-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 APY29_RS20220 be623ff7642c5b5209d9abf2e49941b1 207 Gene3D G3DSA:3.40.50.1000 1 198 3.4E-23 T 28-03-2018 IPR023214 HAD-like domain APY29_RS20220 be623ff7642c5b5209d9abf2e49941b1 207 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 176 6.4E-23 T 28-03-2018 IPR023214 HAD-like domain APY29_RS20220 be623ff7642c5b5209d9abf2e49941b1 207 SUPERFAMILY SSF56784 1 204 1.47E-32 T 28-03-2018 IPR023214 HAD-like domain APY29_RS19600 eaf6d3f76a9d3897caff1d060e31b79d 354 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 75 95 1.3E-5 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APY29_RS19600 eaf6d3f76a9d3897caff1d060e31b79d 354 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 52 70 1.3E-5 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APY29_RS19600 eaf6d3f76a9d3897caff1d060e31b79d 354 Gene3D G3DSA:3.40.50.150 105 241 2.0E-6 T 28-03-2018 APY29_RS19600 eaf6d3f76a9d3897caff1d060e31b79d 354 SUPERFAMILY SSF53335 50 174 2.27E-20 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS19600 eaf6d3f76a9d3897caff1d060e31b79d 354 Gene3D G3DSA:3.40.50.150 39 104 8.2E-15 T 28-03-2018 APY29_RS19600 eaf6d3f76a9d3897caff1d060e31b79d 354 Pfam PF01555 DNA methylase 42 90 4.7E-7 T 28-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 APY29_RS11255 6896a0fa3874dac93b6d274cd10e8bd6 626 Gene3D G3DSA:3.40.50.300 2 116 1.4E-9 T 28-03-2018 APY29_RS11255 6896a0fa3874dac93b6d274cd10e8bd6 626 Pfam PF13175 AAA ATPase domain 279 348 8.7E-10 T 28-03-2018 APY29_RS11255 6896a0fa3874dac93b6d274cd10e8bd6 626 Pfam PF13175 AAA ATPase domain 4 49 5.7E-9 T 28-03-2018 APY29_RS11255 6896a0fa3874dac93b6d274cd10e8bd6 626 SUPERFAMILY SSF52540 2 104 1.51E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11255 6896a0fa3874dac93b6d274cd10e8bd6 626 SUPERFAMILY SSF52540 185 362 1.51E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS11255 6896a0fa3874dac93b6d274cd10e8bd6 626 Gene3D G3DSA:3.40.50.300 251 370 1.1E-9 T 28-03-2018 APY29_RS02735 a7e9d260f24f4fb0fc795e4813f25211 148 Gene3D G3DSA:1.10.1510.10 1 90 1.3E-30 T 28-03-2018 APY29_RS02735 a7e9d260f24f4fb0fc795e4813f25211 148 Gene3D G3DSA:1.10.10.410 91 147 7.3E-19 T 28-03-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal APY29_RS02735 a7e9d260f24f4fb0fc795e4813f25211 148 SUPERFAMILY SSF89095 1 146 7.85E-43 T 28-03-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 APY29_RS02735 a7e9d260f24f4fb0fc795e4813f25211 148 Pfam PF09424 Yqey-like protein 4 146 2.5E-54 T 28-03-2018 IPR019004 Uncharacterised domain YOR215C, mitochondrial APY29_RS19305 ccd4aa732b6049fef25176654320a5c5 91 Pfam PF02583 Metal-sensitive transcriptional repressor 7 83 1.4E-19 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 APY29_RS06295 0b2b059e21715e8319361607ee4e3503 97 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 2.2E-21 T 28-03-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain APY29_RS06295 0b2b059e21715e8319361607ee4e3503 97 Gene3D G3DSA:2.20.28.10 5 39 4.4E-5 T 28-03-2018 APY29_RS06295 0b2b059e21715e8319361607ee4e3503 97 Pfam PF09723 Zinc ribbon domain 1 41 2.2E-15 T 28-03-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain APY29_RS06295 0b2b059e21715e8319361607ee4e3503 97 SMART SM00834 1 42 3.1E-17 T 28-03-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain APY29_RS11780 df20b8095e165d25830e26ace5a7c41e 155 Pfam PF05598 Transposase domain (DUF772) 50 122 5.7E-20 T 28-03-2018 IPR008490 Transposase InsH, N-terminal APY29_RS16430 090117890b3264edc8521ee7c7fb751f 121 Pfam PF07237 Protein of unknown function (DUF1428) 2 103 9.2E-46 T 28-03-2018 IPR009874 Protein of unknown function DUF1428 APY29_RS16430 090117890b3264edc8521ee7c7fb751f 121 SUPERFAMILY SSF54909 1 115 3.86E-51 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel APY29_RS16430 090117890b3264edc8521ee7c7fb751f 121 PIRSF PIRSF007028 1 117 9.5E-56 T 28-03-2018 IPR009874 Protein of unknown function DUF1428 APY29_RS16430 090117890b3264edc8521ee7c7fb751f 121 Gene3D G3DSA:3.30.70.100 1 117 4.7E-61 T 28-03-2018 APY29_RS04890 706693eca06ffea8a712c48a3fb0af0f 390 SUPERFAMILY SSF56935 108 160 4.45E-11 T 28-03-2018 APY29_RS04890 706693eca06ffea8a712c48a3fb0af0f 390 SUPERFAMILY SSF56935 202 387 4.45E-11 T 28-03-2018 APY29_RS04890 706693eca06ffea8a712c48a3fb0af0f 390 Pfam PF07396 Phosphate-selective porin O and P 42 390 1.9E-96 T 28-03-2018 IPR010870 Phosphate-selective porin O/P APY29_RS04890 706693eca06ffea8a712c48a3fb0af0f 390 Gene3D G3DSA:2.40.160.10 31 390 1.2E-35 T 28-03-2018 APY29_RS22990 9bf0cf646e57c5d38e5f7fd4c3691a6d 233 Pfam PF13835 Domain of unknown function (DUF4194) 56 214 1.4E-45 T 28-03-2018 IPR025449 Protein of unknown function DUF4194 APY29_RS15425 20a1378f82007548f672dafeb39790ac 159 Pfam PF05433 Glycine zipper 2TM domain 67 113 9.8E-10 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 APY29_RS09790 fc8f3abd3020a57a84568e0d4ea397b6 371 SUPERFAMILY SSF53850 32 370 1.34E-99 T 28-03-2018 APY29_RS09790 fc8f3abd3020a57a84568e0d4ea397b6 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 80 94 4.6E-56 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APY29_RS09790 fc8f3abd3020a57a84568e0d4ea397b6 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 315 341 4.6E-56 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APY29_RS09790 fc8f3abd3020a57a84568e0d4ea397b6 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 183 202 4.6E-56 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APY29_RS09790 fc8f3abd3020a57a84568e0d4ea397b6 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 220 239 4.6E-56 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APY29_RS09790 fc8f3abd3020a57a84568e0d4ea397b6 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 37 53 4.6E-56 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APY29_RS09790 fc8f3abd3020a57a84568e0d4ea397b6 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 160 174 4.6E-56 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APY29_RS09790 fc8f3abd3020a57a84568e0d4ea397b6 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 53 74 4.6E-56 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APY29_RS09790 fc8f3abd3020a57a84568e0d4ea397b6 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 96 109 4.6E-56 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APY29_RS09790 fc8f3abd3020a57a84568e0d4ea397b6 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 270 289 4.6E-56 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APY29_RS09790 fc8f3abd3020a57a84568e0d4ea397b6 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 129 145 4.6E-56 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APY29_RS09790 fc8f3abd3020a57a84568e0d4ea397b6 371 Pfam PF13416 Bacterial extracellular solute-binding protein 48 334 1.7E-36 T 28-03-2018 APY29_RS09790 fc8f3abd3020a57a84568e0d4ea397b6 371 PIRSF PIRSF019574 1 371 1.3E-136 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APY29_RS09790 fc8f3abd3020a57a84568e0d4ea397b6 371 Gene3D G3DSA:3.40.190.10 25 180 8.4E-30 T 28-03-2018 APY29_RS09790 fc8f3abd3020a57a84568e0d4ea397b6 371 Gene3D G3DSA:3.40.190.10 198 341 1.1E-21 T 28-03-2018 APY29_RS00600 2822052770918cdb666ff918291b2484 412 Pfam PF00144 Beta-lactamase 40 382 2.2E-62 T 28-03-2018 IPR001466 Beta-lactamase-related APY29_RS00600 2822052770918cdb666ff918291b2484 412 SUPERFAMILY SSF56601 37 373 6.02E-74 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like APY29_RS00600 2822052770918cdb666ff918291b2484 412 Gene3D G3DSA:3.40.710.10 34 392 1.2E-73 T 28-03-2018 APY29_RS10300 aae68b11e33639811b92a9aa6ccf04c6 300 SUPERFAMILY SSF51261 69 296 2.62E-54 T 28-03-2018 IPR011055 Duplicated hybrid motif APY29_RS10300 aae68b11e33639811b92a9aa6ccf04c6 300 Pfam PF01551 Peptidase family M23 197 292 7.0E-29 T 28-03-2018 IPR016047 Peptidase M23 APY29_RS10300 aae68b11e33639811b92a9aa6ccf04c6 300 Gene3D G3DSA:2.70.70.10 142 300 6.8E-43 T 28-03-2018 APY29_RS23210 165fc861e6abf33ebbe7ff7c5bf5cd7c 181 PRINTS PR01011 Glutathione peroxidase family signature 58 74 8.2E-19 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 APY29_RS23210 165fc861e6abf33ebbe7ff7c5bf5cd7c 181 PRINTS PR01011 Glutathione peroxidase family signature 141 150 8.2E-19 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 APY29_RS23210 165fc861e6abf33ebbe7ff7c5bf5cd7c 181 PRINTS PR01011 Glutathione peroxidase family signature 23 40 8.2E-19 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 APY29_RS23210 165fc861e6abf33ebbe7ff7c5bf5cd7c 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 28-03-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 APY29_RS23210 165fc861e6abf33ebbe7ff7c5bf5cd7c 181 PIRSF PIRSF000303 1 181 3.0E-61 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 APY29_RS23210 165fc861e6abf33ebbe7ff7c5bf5cd7c 181 Gene3D G3DSA:3.40.30.10 3 181 3.2E-41 T 28-03-2018 APY29_RS23210 165fc861e6abf33ebbe7ff7c5bf5cd7c 181 SUPERFAMILY SSF52833 3 179 3.5E-57 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS23210 165fc861e6abf33ebbe7ff7c5bf5cd7c 181 Pfam PF00255 Glutathione peroxidase 5 111 2.4E-36 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 APY29_RS06850 8b8c898fb9a7bd636a41e11cbf95af49 142 Gene3D G3DSA:1.25.40.10 1 142 2.0E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS06850 8b8c898fb9a7bd636a41e11cbf95af49 142 SMART SM00028 106 139 34.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS06850 8b8c898fb9a7bd636a41e11cbf95af49 142 SMART SM00028 4 37 1.4 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APY29_RS06850 8b8c898fb9a7bd636a41e11cbf95af49 142 SUPERFAMILY SSF48452 4 139 7.59E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS18675 8eabb656af5de7ec08028b80c1d4a763 387 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 2 386 68.621 T 28-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 APY29_RS18675 8eabb656af5de7ec08028b80c1d4a763 387 Gene3D G3DSA:3.20.20.30 1 364 2.3E-88 T 28-03-2018 APY29_RS18675 8eabb656af5de7ec08028b80c1d4a763 387 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 355 1.3E-188 T 28-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 APY29_RS18675 8eabb656af5de7ec08028b80c1d4a763 387 SUPERFAMILY SSF51679 1 357 1.19E-92 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APY29_RS18675 8eabb656af5de7ec08028b80c1d4a763 387 Pfam PF00296 Luciferase-like monooxygenase 1 331 2.8E-84 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APY29_RS15875 6e30749214856a768a55d2f0dfc46adc 319 Pfam PF07103 Protein of unknown function (DUF1365) 58 312 3.6E-73 T 28-03-2018 IPR010775 Protein of unknown function DUF1365 APY29_RS09290 848ce9f5d32f699a767caf24e73aeaa6 66 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 15 36 2.2E-9 T 28-03-2018 IPR019626 Stress-induced protein, KGG, repeat APY29_RS09290 848ce9f5d32f699a767caf24e73aeaa6 66 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 42 61 1.6E-6 T 28-03-2018 IPR019626 Stress-induced protein, KGG, repeat APY29_RS16695 21c71866cac61e6e580dbf46c97e3c14 530 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 1 488 19.388 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ APY29_RS16695 21c71866cac61e6e580dbf46c97e3c14 530 PRINTS PR01806 Virulence factor MviN signature 50 66 8.3E-71 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ APY29_RS16695 21c71866cac61e6e580dbf46c97e3c14 530 PRINTS PR01806 Virulence factor MviN signature 355 374 8.3E-71 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ APY29_RS16695 21c71866cac61e6e580dbf46c97e3c14 530 PRINTS PR01806 Virulence factor MviN signature 31 50 8.3E-71 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ APY29_RS16695 21c71866cac61e6e580dbf46c97e3c14 530 PRINTS PR01806 Virulence factor MviN signature 430 447 8.3E-71 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ APY29_RS16695 21c71866cac61e6e580dbf46c97e3c14 530 PRINTS PR01806 Virulence factor MviN signature 257 283 8.3E-71 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ APY29_RS16695 21c71866cac61e6e580dbf46c97e3c14 530 PRINTS PR01806 Virulence factor MviN signature 155 176 8.3E-71 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ APY29_RS16695 21c71866cac61e6e580dbf46c97e3c14 530 PRINTS PR01806 Virulence factor MviN signature 131 155 8.3E-71 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ APY29_RS16695 21c71866cac61e6e580dbf46c97e3c14 530 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 512 7.9E-118 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ APY29_RS16695 21c71866cac61e6e580dbf46c97e3c14 530 Pfam PF03023 MviN-like protein 26 491 7.2E-121 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ APY29_RS16695 21c71866cac61e6e580dbf46c97e3c14 530 PIRSF PIRSF002869 1 529 5.4E-143 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ APY29_RS05030 a0feaf9e4c8be05d9e63553a19dfaac8 784 Gene3D G3DSA:2.130.10.150 293 473 2.5E-25 T 28-03-2018 APY29_RS05030 a0feaf9e4c8be05d9e63553a19dfaac8 784 Gene3D G3DSA:2.130.10.150 215 292 4.3E-8 T 28-03-2018 APY29_RS05030 a0feaf9e4c8be05d9e63553a19dfaac8 784 Pfam PF07676 WD40-like Beta Propeller Repeat 272 305 1.4E-6 T 28-03-2018 IPR011659 WD40-like Beta Propeller APY29_RS05030 a0feaf9e4c8be05d9e63553a19dfaac8 784 Pfam PF07676 WD40-like Beta Propeller Repeat 329 342 0.12 T 28-03-2018 IPR011659 WD40-like Beta Propeller APY29_RS05030 a0feaf9e4c8be05d9e63553a19dfaac8 784 Pfam PF07676 WD40-like Beta Propeller Repeat 498 533 1.0E-7 T 28-03-2018 IPR011659 WD40-like Beta Propeller APY29_RS05030 a0feaf9e4c8be05d9e63553a19dfaac8 784 Pfam PF07676 WD40-like Beta Propeller Repeat 226 249 0.078 T 28-03-2018 IPR011659 WD40-like Beta Propeller APY29_RS05030 a0feaf9e4c8be05d9e63553a19dfaac8 784 Pfam PF07676 WD40-like Beta Propeller Repeat 377 398 1.3E-4 T 28-03-2018 IPR011659 WD40-like Beta Propeller APY29_RS05030 a0feaf9e4c8be05d9e63553a19dfaac8 784 SMART SM00862 26 102 1.0E-15 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS05030 a0feaf9e4c8be05d9e63553a19dfaac8 784 Gene3D G3DSA:2.140.10.30 474 641 6.8E-13 T 28-03-2018 APY29_RS05030 a0feaf9e4c8be05d9e63553a19dfaac8 784 SUPERFAMILY SSF46894 2 103 1.08E-16 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS05030 a0feaf9e4c8be05d9e63553a19dfaac8 784 SUPERFAMILY SSF50969 499 758 2.82E-9 T 28-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like APY29_RS05030 a0feaf9e4c8be05d9e63553a19dfaac8 784 SUPERFAMILY SSF82171 224 546 4.32E-36 T 28-03-2018 APY29_RS05030 a0feaf9e4c8be05d9e63553a19dfaac8 784 Gene3D G3DSA:1.10.10.10 2 108 1.3E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS05030 a0feaf9e4c8be05d9e63553a19dfaac8 784 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 102 3.8E-17 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS17420 c539c7470197fd14cd9fbddde6f3db24 169 Pfam PF02620 Uncharacterized ACR, COG1399 61 167 1.8E-10 T 28-03-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD APY29_RS12905 f7aa6a322436b7197f4bfbc9afd13cf4 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 8.0E-15 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 APY29_RS12905 f7aa6a322436b7197f4bfbc9afd13cf4 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 8.0E-15 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 APY29_RS12905 f7aa6a322436b7197f4bfbc9afd13cf4 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 8.0E-15 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 APY29_RS12905 f7aa6a322436b7197f4bfbc9afd13cf4 89 Pfam PF01313 Bacterial export proteins, family 3 10 77 4.4E-20 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 APY29_RS12905 f7aa6a322436b7197f4bfbc9afd13cf4 89 PIRSF PIRSF004669 1 89 5.4E-23 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 APY29_RS07175 f50a4ca5a7effcd157f596506344c4c9 460 PIRSF PIRSF006060 4 454 1.0E-61 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APY29_RS07175 f50a4ca5a7effcd157f596506344c4c9 460 Pfam PF13520 Amino acid permease 37 415 9.0E-33 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APY29_RS02550 352754abc3ac3008cb26c974ff54e503 240 Pfam PF00535 Glycosyl transferase family 2 7 168 2.5E-23 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 APY29_RS02550 352754abc3ac3008cb26c974ff54e503 240 Gene3D G3DSA:3.90.550.10 2 235 2.6E-31 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS02550 352754abc3ac3008cb26c974ff54e503 240 SUPERFAMILY SSF53448 1 228 8.44E-39 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS20560 e9ea44e1fb62dd7271d43b184e64c6e6 396 Pfam PF07690 Major Facilitator Superfamily 22 275 1.7E-24 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS20560 e9ea44e1fb62dd7271d43b184e64c6e6 396 Gene3D G3DSA:1.20.1250.20 10 198 7.4E-24 T 28-03-2018 APY29_RS20560 e9ea44e1fb62dd7271d43b184e64c6e6 396 SUPERFAMILY SSF103473 7 390 1.1E-47 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS20560 e9ea44e1fb62dd7271d43b184e64c6e6 396 Gene3D G3DSA:1.20.1250.20 200 394 1.3E-11 T 28-03-2018 APY29_RS03710 a3b781b67592ffc14a8b333f2e5655d2 355 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 277 283 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APY29_RS03710 a3b781b67592ffc14a8b333f2e5655d2 355 SUPERFAMILY SSF53335 169 345 2.47E-23 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS03710 a3b781b67592ffc14a8b333f2e5655d2 355 Pfam PF05175 Methyltransferase small domain 177 345 9.9E-52 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 APY29_RS03710 a3b781b67592ffc14a8b333f2e5655d2 355 Gene3D G3DSA:3.40.50.150 20 172 0.0027 T 28-03-2018 APY29_RS03710 a3b781b67592ffc14a8b333f2e5655d2 355 Gene3D G3DSA:3.40.50.150 173 354 9.2E-27 T 28-03-2018 APY29_RS22305 7af87eac07a0293ab2bdd908800477c1 328 Gene3D G3DSA:3.40.50.150 8 326 6.1E-18 T 28-03-2018 APY29_RS22305 7af87eac07a0293ab2bdd908800477c1 328 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 25 324 2.0E-118 T 28-03-2018 IPR035094 Histidine N-alpha-methyltransferase KEGG: 00340+2.1.1.44|MetaCyc: PWY-7255|MetaCyc: PWY-7550 APY29_RS22305 7af87eac07a0293ab2bdd908800477c1 328 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 26 326 1.8E-100 T 28-03-2018 IPR019257 Histidine-specific methyltransferase, SAM-dependent APY29_RS22305 7af87eac07a0293ab2bdd908800477c1 328 SUPERFAMILY SSF53335 290 320 3.69E-10 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS22305 7af87eac07a0293ab2bdd908800477c1 328 SUPERFAMILY SSF53335 23 247 3.69E-10 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS22305 7af87eac07a0293ab2bdd908800477c1 328 PIRSF PIRSF018005 1 328 1.5E-139 T 28-03-2018 IPR017804 Methyltransferase EgtD-like APY29_RS22755 6b3063e4560cb0363c272642541e05f5 344 Pfam PF04616 Glycosyl hydrolases family 43 88 330 3.0E-25 T 28-03-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APY29_RS22755 6b3063e4560cb0363c272642541e05f5 344 Gene3D G3DSA:2.115.10.20 16 337 2.7E-63 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APY29_RS22755 6b3063e4560cb0363c272642541e05f5 344 SUPERFAMILY SSF75005 10 330 1.7E-56 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APY29_RS13430 f5604bb2563091518bf93b179716d4d4 195 Gene3D G3DSA:3.90.79.10 52 195 4.8E-16 T 28-03-2018 APY29_RS13430 f5604bb2563091518bf93b179716d4d4 195 Pfam PF00293 NUDIX domain 68 185 6.8E-7 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 APY29_RS13430 f5604bb2563091518bf93b179716d4d4 195 SUPERFAMILY SSF55811 60 192 3.25E-16 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 APY29_RS04650 580589e58aac23646eadadd532b1cc29 271 Pfam PF01670 Glycosyl hydrolase family 12 155 260 1.8E-6 T 28-03-2018 IPR002594 Glycoside hydrolase family 12 GO:0000272|GO:0008810 APY29_RS04650 580589e58aac23646eadadd532b1cc29 271 Gene3D G3DSA:2.60.120.180 38 267 6.7E-25 T 28-03-2018 IPR013319 Glycoside hydrolase family 11/12 GO:0004553 MetaCyc: PWY-6784 APY29_RS04650 580589e58aac23646eadadd532b1cc29 271 SUPERFAMILY SSF49899 42 265 2.26E-33 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain APY29_RS23650 9dfb75d6b812f0b93134b5894cbe187f 78 Gene3D G3DSA:1.10.1220.10 1 78 1.5E-20 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APY29_RS23650 9dfb75d6b812f0b93134b5894cbe187f 78 SUPERFAMILY SSF47598 1 76 8.01E-18 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 APY29_RS23650 9dfb75d6b812f0b93134b5894cbe187f 78 Pfam PF09274 ParG 35 71 1.1E-5 T 28-03-2018 IPR015354 DNA partition complex, ParG APY29_RS20160 aef0326ab0af7e02299e98237a942bfd 185 TIGRFAM TIGR04474 tcm_partner: three-Cys-motif partner protein 18 179 2.1E-23 T 28-03-2018 IPR031009 Three-Cys-motif partner protein APY29_RS20160 aef0326ab0af7e02299e98237a942bfd 185 Gene3D G3DSA:3.40.50.150 6 180 8.1E-5 T 28-03-2018 APY29_RS02695 397d0a7145169e512ad0eff0c1137036 191 SUPERFAMILY SSF52833 66 188 3.41E-7 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS02695 397d0a7145169e512ad0eff0c1137036 191 Gene3D G3DSA:3.40.30.10 22 190 3.7E-4 T 28-03-2018 APY29_RS00285 15625f5de0e3b880d9a5f0339f3d4754 380 Pfam PF00534 Glycosyl transferases group 1 200 353 4.9E-28 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 APY29_RS00285 15625f5de0e3b880d9a5f0339f3d4754 380 Pfam PF13439 Glycosyltransferase Family 4 16 179 1.1E-10 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 APY29_RS00285 15625f5de0e3b880d9a5f0339f3d4754 380 Gene3D G3DSA:3.40.50.2000 160 373 1.1E-39 T 28-03-2018 APY29_RS00285 15625f5de0e3b880d9a5f0339f3d4754 380 SUPERFAMILY SSF53756 5 378 1.61E-69 T 28-03-2018 APY29_RS23080 eabef2ce6c095c049d629ba996a61f53 539 Pfam PF00756 Putative esterase 218 352 3.2E-15 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 APY29_RS23080 eabef2ce6c095c049d629ba996a61f53 539 SUPERFAMILY SSF53474 215 353 7.57E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS23080 eabef2ce6c095c049d629ba996a61f53 539 SUPERFAMILY SSF53474 458 513 7.57E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS23080 eabef2ce6c095c049d629ba996a61f53 539 Gene3D G3DSA:3.40.50.1820 54 534 7.4E-23 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS21840 b12578911852b27c290d5b3ee9aa6027 172 SUPERFAMILY SSF46626 52 169 1.83E-16 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS21840 b12578911852b27c290d5b3ee9aa6027 172 Gene3D G3DSA:1.10.760.10 62 170 3.4E-13 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS21840 b12578911852b27c290d5b3ee9aa6027 172 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 90 167 8.4E-12 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS01170 aabee788d348c92e3d350e98a5a1fd92 187 Gene3D G3DSA:3.40.30.10 11 174 2.1E-20 T 28-03-2018 APY29_RS01170 aabee788d348c92e3d350e98a5a1fd92 187 SUPERFAMILY SSF52833 33 175 1.26E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS01170 aabee788d348c92e3d350e98a5a1fd92 187 ProSitePatterns PS00194 Thioredoxin family active site. 64 82 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 APY29_RS01170 aabee788d348c92e3d350e98a5a1fd92 187 Pfam PF08534 Redoxin 37 172 1.5E-6 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 APY29_RS04125 ba97425a73d310bf6175e628abdcccb6 456 Gene3D G3DSA:3.10.580.10 327 456 3.0E-18 T 28-03-2018 APY29_RS04125 ba97425a73d310bf6175e628abdcccb6 456 Gene3D G3DSA:3.40.50.1100 138 322 2.7E-47 T 28-03-2018 APY29_RS04125 ba97425a73d310bf6175e628abdcccb6 456 SUPERFAMILY SSF54631 335 452 2.65E-17 T 28-03-2018 APY29_RS04125 ba97425a73d310bf6175e628abdcccb6 456 Pfam PF00571 CBS domain 341 388 8.0E-7 T 28-03-2018 IPR000644 CBS domain APY29_RS04125 ba97425a73d310bf6175e628abdcccb6 456 SUPERFAMILY SSF53686 2 321 7.73E-91 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APY29_RS04125 ba97425a73d310bf6175e628abdcccb6 456 Gene3D G3DSA:3.40.50.1100 19 137 8.1E-35 T 28-03-2018 APY29_RS04125 ba97425a73d310bf6175e628abdcccb6 456 SMART SM00116 343 390 5.1E-7 T 28-03-2018 IPR000644 CBS domain APY29_RS04125 ba97425a73d310bf6175e628abdcccb6 456 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 28-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 APY29_RS04125 ba97425a73d310bf6175e628abdcccb6 456 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 302 9.5E-63 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APY29_RS19790 5019673884672c38660e410f099e9e53 166 Gene3D G3DSA:3.40.630.30 8 164 2.5E-26 T 28-03-2018 APY29_RS19790 5019673884672c38660e410f099e9e53 166 SUPERFAMILY SSF55729 10 159 5.95E-32 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS19790 5019673884672c38660e410f099e9e53 166 Pfam PF13673 Acetyltransferase (GNAT) domain 81 155 1.6E-11 T 28-03-2018 IPR000182 GNAT domain GO:0008080 APY29_RS02070 6bc791daa86b9a671af3c74d90d3e2f4 529 Pfam PF08811 Protein of unknown function (DUF1800) 52 527 1.4E-127 T 28-03-2018 IPR014917 Protein of unknown function DUF1800 APY29_RS18310 5c7a6fb96c9fe5c8ac321e64a0ec394b 163 Pfam PF11304 Protein of unknown function (DUF3106) 56 153 7.1E-22 T 28-03-2018 IPR021455 Protein of unknown function DUF3106 APY29_RS18310 5c7a6fb96c9fe5c8ac321e64a0ec394b 163 Gene3D G3DSA:1.10.510.10 29 159 4.9E-4 T 28-03-2018 APY29_RS09115 bf8de4dc44135e4b8e9da2423a409f00 119 Pfam PF00453 Ribosomal protein L20 3 109 3.7E-47 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS09115 bf8de4dc44135e4b8e9da2423a409f00 119 SUPERFAMILY SSF74731 3 117 1.99E-48 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS09115 bf8de4dc44135e4b8e9da2423a409f00 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.5E-39 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS09115 bf8de4dc44135e4b8e9da2423a409f00 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.5E-39 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS09115 bf8de4dc44135e4b8e9da2423a409f00 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.5E-39 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS09115 bf8de4dc44135e4b8e9da2423a409f00 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.9E-48 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS09115 bf8de4dc44135e4b8e9da2423a409f00 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS09115 bf8de4dc44135e4b8e9da2423a409f00 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 1.0E-21 T 28-03-2018 APY29_RS09115 bf8de4dc44135e4b8e9da2423a409f00 119 Gene3D G3DSA:1.10.1900.20 55 116 3.6E-28 T 28-03-2018 IPR035566 Ribosomal protein L20 C-terminal domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS09115 bf8de4dc44135e4b8e9da2423a409f00 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.372 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS06920 ea8175d3a383695fed48c722905ad2da 301 Pfam PF01551 Peptidase family M23 176 275 1.3E-24 T 28-03-2018 IPR016047 Peptidase M23 APY29_RS06920 ea8175d3a383695fed48c722905ad2da 301 SUPERFAMILY SSF51261 154 276 1.62E-30 T 28-03-2018 IPR011055 Duplicated hybrid motif APY29_RS06920 ea8175d3a383695fed48c722905ad2da 301 Gene3D G3DSA:2.70.70.10 138 288 4.6E-28 T 28-03-2018 APY29_RS10350 d7d3c43b3e23ba7132049583a362407f 150 SUPERFAMILY SSF55729 28 126 1.71E-17 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS10350 d7d3c43b3e23ba7132049583a362407f 150 Pfam PF13508 Acetyltransferase (GNAT) domain 58 126 1.2E-9 T 28-03-2018 IPR000182 GNAT domain GO:0008080 APY29_RS10350 d7d3c43b3e23ba7132049583a362407f 150 Gene3D G3DSA:3.40.630.30 4 136 1.6E-18 T 28-03-2018 APY29_RS12790 d8d43caf760e39632e3945015f63fe09 345 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 245 333 2.4E-25 T 28-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 APY29_RS12790 d8d43caf760e39632e3945015f63fe09 345 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 114 184 9.7E-10 T 28-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 APY29_RS12790 d8d43caf760e39632e3945015f63fe09 345 Gene3D G3DSA:3.40.47.10 209 334 7.5E-25 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS12790 d8d43caf760e39632e3945015f63fe09 345 Gene3D G3DSA:3.40.47.10 7 208 7.0E-22 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS12790 d8d43caf760e39632e3945015f63fe09 345 SUPERFAMILY SSF53901 4 334 1.6E-41 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS02870 80332767432e01fce8dc3a80974c4a7c 414 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 377 1.4E-83 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 APY29_RS02870 80332767432e01fce8dc3a80974c4a7c 414 SUPERFAMILY SSF111369 64 300 4.97E-57 T 28-03-2018 APY29_RS02870 80332767432e01fce8dc3a80974c4a7c 414 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 74 295 2.3E-20 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APY29_RS02870 80332767432e01fce8dc3a80974c4a7c 414 Gene3D G3DSA:2.40.50.100 74 146 3.6E-17 T 28-03-2018 APY29_RS02870 80332767432e01fce8dc3a80974c4a7c 414 Gene3D G3DSA:2.40.50.100 174 380 0.0072 T 28-03-2018 APY29_RS12835 4ea4f497ce622b2202cdbaf02a46adaa 257 Gene3D G3DSA:3.30.420.10 80 250 5.7E-35 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS12835 4ea4f497ce622b2202cdbaf02a46adaa 257 Pfam PF13276 HTH-like domain 22 75 2.4E-10 T 28-03-2018 IPR025948 HTH-like domain APY29_RS12835 4ea4f497ce622b2202cdbaf02a46adaa 257 SUPERFAMILY SSF53098 83 245 1.9E-38 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS12835 4ea4f497ce622b2202cdbaf02a46adaa 257 Pfam PF13683 Integrase core domain 175 240 2.9E-28 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 APY29_RS00400 b06168588446756be75f93dce695f06b 274 Gene3D G3DSA:3.40.50.300 2 272 1.5E-41 T 28-03-2018 APY29_RS00400 b06168588446756be75f93dce695f06b 274 SUPERFAMILY SSF52540 6 271 1.38E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS00400 b06168588446756be75f93dce695f06b 274 Pfam PF00685 Sulfotransferase domain 7 267 3.3E-25 T 28-03-2018 IPR000863 Sulfotransferase domain GO:0008146 APY29_RS11485 65fd40ebe34a502416a6bbfef8de1c0e 249 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 16 249 1.0E-100 T 28-03-2018 IPR022266 Integrating conjugative element protein, PFL4697-type APY29_RS11485 65fd40ebe34a502416a6bbfef8de1c0e 249 Pfam PF14348 Domain of unknown function (DUF4400) 51 246 9.5E-76 T 28-03-2018 IPR022266 Integrating conjugative element protein, PFL4697-type APY29_RS04495 37c573cf671cdd9445cde0410f5f2e29 373 SUPERFAMILY SSF53067 86 184 1.42E-5 T 28-03-2018 APY29_RS04495 37c573cf671cdd9445cde0410f5f2e29 373 Pfam PF05137 Fimbrial assembly protein (PilN) 287 358 1.0E-13 T 28-03-2018 IPR007813 Fimbrial assembly PilN APY29_RS16400 646c93009e21542158ac687c20d83516 122 Gene3D G3DSA:3.40.50.2300 1 119 3.6E-25 T 28-03-2018 APY29_RS16400 646c93009e21542158ac687c20d83516 122 SMART SM00448 5 115 2.1E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS16400 646c93009e21542158ac687c20d83516 122 SUPERFAMILY SSF52172 4 118 2.56E-25 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS16400 646c93009e21542158ac687c20d83516 122 Pfam PF00072 Response regulator receiver domain 8 115 2.8E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS04685 94f9030535d68f88e144bddf80b39c20 289 SUPERFAMILY SSF69318 158 282 4.05E-5 T 28-03-2018 APY29_RS09510 2c9353f26a22ec40d0c64285b624c155 592 Pfam PF01019 Gamma-glutamyltranspeptidase 62 578 5.8E-166 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS09510 2c9353f26a22ec40d0c64285b624c155 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 259 275 5.4E-65 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS09510 2c9353f26a22ec40d0c64285b624c155 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 451 466 5.4E-65 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS09510 2c9353f26a22ec40d0c64285b624c155 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 474 491 5.4E-65 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS09510 2c9353f26a22ec40d0c64285b624c155 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 69 94 5.4E-65 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS09510 2c9353f26a22ec40d0c64285b624c155 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 161 180 5.4E-65 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS09510 2c9353f26a22ec40d0c64285b624c155 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 386 404 5.4E-65 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS09510 2c9353f26a22ec40d0c64285b624c155 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 410 428 5.4E-65 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS09510 2c9353f26a22ec40d0c64285b624c155 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 143 161 5.4E-65 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS09510 2c9353f26a22ec40d0c64285b624c155 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 289 308 5.4E-65 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS09510 2c9353f26a22ec40d0c64285b624c155 592 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 49 577 6.4E-140 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APY29_RS09510 2c9353f26a22ec40d0c64285b624c155 592 SUPERFAMILY SSF56235 44 578 1.58E-165 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APY29_RS20820 5309f9238f738863803bda7370ed967f 139 Pfam PF03334 Na+/H+ antiporter subunit 12 92 1.2E-24 T 28-03-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 APY29_RS20820 5309f9238f738863803bda7370ed967f 139 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 12 95 9.2E-23 T 28-03-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 APY29_RS03290 d6df2b76219ae5c4a260e357ecff79af 616 SUPERFAMILY SSF53187 97 357 5.62E-42 T 28-03-2018 APY29_RS03290 d6df2b76219ae5c4a260e357ecff79af 616 Pfam PF00246 Zinc carboxypeptidase 102 254 3.6E-20 T 28-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 APY29_RS03290 d6df2b76219ae5c4a260e357ecff79af 616 SMART SM00631 96 371 2.1E-5 T 28-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 APY29_RS03290 d6df2b76219ae5c4a260e357ecff79af 616 Gene3D G3DSA:3.40.630.10 85 372 9.9E-39 T 28-03-2018 APY29_RS14500 7a177b78542b202332dfea7f08dbe343 322 Gene3D G3DSA:3.90.420.10 56 322 2.9E-63 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 APY29_RS14500 7a177b78542b202332dfea7f08dbe343 322 Pfam PF00174 Oxidoreductase molybdopterin binding domain 99 254 5.7E-33 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 APY29_RS14500 7a177b78542b202332dfea7f08dbe343 322 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 7 322 53.785 T 28-03-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 APY29_RS14500 7a177b78542b202332dfea7f08dbe343 322 SUPERFAMILY SSF56524 67 318 2.09E-90 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 APY29_RS05270 dcda387b11f6f5bf2eb4bd6aa2694841 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 123 5.6E-10 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APY29_RS05270 dcda387b11f6f5bf2eb4bd6aa2694841 130 SUPERFAMILY SSF54593 3 128 2.42E-25 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS05270 dcda387b11f6f5bf2eb4bd6aa2694841 130 Gene3D G3DSA:3.10.180.10 1 130 1.2E-21 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS17525 dcc68551fa952d6c8863be283426f074 349 Gene3D G3DSA:3.40.50.2000 159 348 1.6E-38 T 28-03-2018 APY29_RS17525 dcc68551fa952d6c8863be283426f074 349 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 71 299 1.4E-42 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APY29_RS17525 dcc68551fa952d6c8863be283426f074 349 Gene3D G3DSA:3.40.50.2000 2 155 3.0E-27 T 28-03-2018 APY29_RS17525 dcc68551fa952d6c8863be283426f074 349 SUPERFAMILY SSF53756 8 345 1.35E-74 T 28-03-2018 APY29_RS22665 4f7fed3b474a7a2267e21315dc8a0d29 380 Gene3D G3DSA:1.20.1250.20 1 173 3.6E-6 T 28-03-2018 APY29_RS22665 4f7fed3b474a7a2267e21315dc8a0d29 380 Gene3D G3DSA:1.20.1250.20 182 377 6.9E-13 T 28-03-2018 APY29_RS22665 4f7fed3b474a7a2267e21315dc8a0d29 380 SUPERFAMILY SSF103473 5 367 3.66E-25 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS15490 a3889951eb5023d6d0e49fee91082d73 281 Gene3D G3DSA:3.90.640.20 165 280 1.4E-12 T 28-03-2018 IPR021729 Domain of unknown function DUF3298 APY29_RS15490 a3889951eb5023d6d0e49fee91082d73 281 Gene3D G3DSA:3.30.565.40 59 162 2.8E-8 T 28-03-2018 APY29_RS11680 f90c87881eacc23ebd3e20686c134040 291 Pfam PF13614 AAA domain 1 168 2.7E-25 T 28-03-2018 IPR025669 AAA domain APY29_RS11680 f90c87881eacc23ebd3e20686c134040 291 Gene3D G3DSA:3.40.50.300 1 277 1.6E-45 T 28-03-2018 APY29_RS11680 f90c87881eacc23ebd3e20686c134040 291 SUPERFAMILY SSF52540 1 263 1.07E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS03695 64776a4e65879580a6bf8bfb894c553a 102 Pfam PF11607 Protein of unknown function (DUF3247) 1 92 1.2E-39 T 28-03-2018 IPR021649 Protein of unknown function DUF3247 APY29_RS05185 7561344035385512da2401461ba1310e 79 PRINTS PR00163 Rubredoxin signature 57 73 3.0E-7 T 28-03-2018 IPR024935 Rubredoxin domain GO:0005506 APY29_RS05185 7561344035385512da2401461ba1310e 79 PRINTS PR00163 Rubredoxin signature 27 43 3.0E-7 T 28-03-2018 IPR024935 Rubredoxin domain GO:0005506 APY29_RS05185 7561344035385512da2401461ba1310e 79 SUPERFAMILY SSF57802 23 77 1.04E-21 T 28-03-2018 APY29_RS05185 7561344035385512da2401461ba1310e 79 Gene3D G3DSA:2.20.28.10 23 78 5.5E-23 T 28-03-2018 APY29_RS05185 7561344035385512da2401461ba1310e 79 Pfam PF00301 Rubredoxin 28 73 6.1E-21 T 28-03-2018 IPR024935 Rubredoxin domain GO:0005506 APY29_RS05185 7561344035385512da2401461ba1310e 79 ProSitePatterns PS00202 Rubredoxin signature. 57 67 - T 28-03-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 APY29_RS05185 7561344035385512da2401461ba1310e 79 PIRSF PIRSF000071 17 79 1.5E-23 T 28-03-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 APY29_RS20405 774df83b272406129b98d180a32f1ba6 336 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 21 203 1.4E-31 T 28-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal APY29_RS20405 774df83b272406129b98d180a32f1ba6 336 Gene3D G3DSA:1.10.10.60 288 336 3.6E-9 T 28-03-2018 APY29_RS20405 774df83b272406129b98d180a32f1ba6 336 Gene3D G3DSA:1.10.10.10 261 287 0.01 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS20405 774df83b272406129b98d180a32f1ba6 336 Pfam PF12833 Helix-turn-helix domain 255 331 2.9E-16 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS20405 774df83b272406129b98d180a32f1ba6 336 SMART SM00342 248 330 2.7E-15 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APY29_RS20405 774df83b272406129b98d180a32f1ba6 336 Gene3D G3DSA:1.10.10.60 185 260 1.7E-4 T 28-03-2018 APY29_RS20405 774df83b272406129b98d180a32f1ba6 336 SUPERFAMILY SSF46689 284 334 3.94E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS10065 c5f2ed5b18388e58c106a2055cc8f723 311 Pfam PF07920 Protein of unknown function (DUF1684) 169 305 2.1E-42 T 28-03-2018 IPR012467 Protein of unknown function DUF1684 APY29_RS20850 53c72f544be82f25b890814844104a8c 356 Gene3D G3DSA:3.10.180.10 159 356 3.5E-59 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS20850 53c72f544be82f25b890814844104a8c 356 PIRSF PIRSF009283 1 356 3.2E-126 T 28-03-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 APY29_RS20850 53c72f544be82f25b890814844104a8c 356 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 147 1.1E-60 T 28-03-2018 APY29_RS20850 53c72f544be82f25b890814844104a8c 356 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 164 274 8.4E-16 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APY29_RS20850 53c72f544be82f25b890814844104a8c 356 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 14 356 2.5E-114 T 28-03-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 APY29_RS20850 53c72f544be82f25b890814844104a8c 356 Gene3D G3DSA:3.10.180.10 3 158 1.6E-16 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS20850 53c72f544be82f25b890814844104a8c 356 SUPERFAMILY SSF54593 1 343 4.74E-72 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS13860 d1ad6120bd0fff6e8d7d4fcce2ccf42e 303 SUPERFAMILY SSF63829 5 298 1.99E-57 T 28-03-2018 APY29_RS13860 d1ad6120bd0fff6e8d7d4fcce2ccf42e 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 101 122 1.3E-26 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) APY29_RS13860 d1ad6120bd0fff6e8d7d4fcce2ccf42e 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 207 224 1.3E-26 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) APY29_RS13860 d1ad6120bd0fff6e8d7d4fcce2ccf42e 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 249 267 1.3E-26 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) APY29_RS13860 d1ad6120bd0fff6e8d7d4fcce2ccf42e 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 167 187 1.3E-26 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) APY29_RS13860 d1ad6120bd0fff6e8d7d4fcce2ccf42e 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 20 37 1.3E-26 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) APY29_RS13860 d1ad6120bd0fff6e8d7d4fcce2ccf42e 303 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 20 267 2.9E-70 T 28-03-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region APY29_RS13860 d1ad6120bd0fff6e8d7d4fcce2ccf42e 303 Gene3D G3DSA:2.120.10.30 94 303 4.9E-24 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS13860 d1ad6120bd0fff6e8d7d4fcce2ccf42e 303 Gene3D G3DSA:2.120.10.30 3 93 0.052 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS09145 3788bc56774e976ae5cc321eefbe6802 213 Gene3D G3DSA:3.10.560.10 97 189 2.4E-20 T 28-03-2018 APY29_RS09145 3788bc56774e976ae5cc321eefbe6802 213 Gene3D G3DSA:3.30.1950.10 35 96 6.8E-14 T 28-03-2018 APY29_RS09145 3788bc56774e976ae5cc321eefbe6802 213 Pfam PF10531 SLBB domain 108 160 7.6E-9 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS09145 3788bc56774e976ae5cc321eefbe6802 213 Pfam PF02563 Polysaccharide biosynthesis/export protein 26 101 8.3E-20 T 28-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 APY29_RS22895 c0fd1c7a1a59ed181665d331a9ad20c8 209 SUPERFAMILY SSF57716 143 195 2.8E-13 T 28-03-2018 APY29_RS22895 c0fd1c7a1a59ed181665d331a9ad20c8 209 Gene3D G3DSA:3.40.50.300 1 142 4.9E-44 T 28-03-2018 APY29_RS22895 c0fd1c7a1a59ed181665d331a9ad20c8 209 Hamap MF_00124 Thymidine kinase [tdk]. 1 190 33.446 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 APY29_RS22895 c0fd1c7a1a59ed181665d331a9ad20c8 209 SUPERFAMILY SSF52540 1 142 5.75E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS22895 c0fd1c7a1a59ed181665d331a9ad20c8 209 PIRSF PIRSF035805 1 197 8.2E-51 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 APY29_RS22895 c0fd1c7a1a59ed181665d331a9ad20c8 209 Pfam PF00265 Thymidine kinase 2 185 1.3E-48 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 APY29_RS22895 c0fd1c7a1a59ed181665d331a9ad20c8 209 Gene3D G3DSA:3.30.60.20 143 193 1.6E-12 T 28-03-2018 APY29_RS12325 cfd86385230fc399e2934045b07eb7a5 333 Pfam PF09571 XcyI restriction endonuclease 22 327 5.0E-111 T 28-03-2018 IPR019071 Restriction endonuclease, type II, XcyI GO:0000287|GO:0003677|GO:0009036|GO:0009307 APY29_RS02750 11d7c74cde46504324851c4b1d14709a 118 Gene3D G3DSA:3.30.1130.10 1 118 3.3E-36 T 28-03-2018 APY29_RS02750 11d7c74cde46504324851c4b1d14709a 118 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 4.3E-24 T 28-03-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 APY29_RS02750 11d7c74cde46504324851c4b1d14709a 118 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.5E-30 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 APY29_RS02750 11d7c74cde46504324851c4b1d14709a 118 SUPERFAMILY SSF55620 1 116 6.12E-36 T 28-03-2018 APY29_RS02750 11d7c74cde46504324851c4b1d14709a 118 SMART SM00905 4 114 1.7E-47 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 APY29_RS02750 11d7c74cde46504324851c4b1d14709a 118 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 1.3E-32 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 APY29_RS18920 5638976e64c3ded3ef722145515fc18b 310 Pfam PF00685 Sulfotransferase domain 27 278 1.7E-40 T 28-03-2018 IPR000863 Sulfotransferase domain GO:0008146 APY29_RS18920 5638976e64c3ded3ef722145515fc18b 310 Gene3D G3DSA:3.40.50.300 4 287 3.7E-44 T 28-03-2018 APY29_RS18920 5638976e64c3ded3ef722145515fc18b 310 SUPERFAMILY SSF52540 19 278 1.14E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS03375 c205a1935b1856cfb8a9dc1621e26fe4 383 SUPERFAMILY SSF51445 6 352 3.28E-50 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS03375 c205a1935b1856cfb8a9dc1621e26fe4 383 Gene3D G3DSA:3.20.20.80 3 362 8.2E-35 T 28-03-2018 APY29_RS03135 9e9501419e9dff66ef565784c797e1cd 146 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 1.6E-49 T 28-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 APY29_RS03135 9e9501419e9dff66ef565784c797e1cd 146 SUPERFAMILY SSF69500 1 144 9.42E-51 T 28-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain APY29_RS03135 9e9501419e9dff66ef565784c797e1cd 146 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 144 3.3E-51 T 28-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 APY29_RS03135 9e9501419e9dff66ef565784c797e1cd 146 Gene3D G3DSA:3.50.80.10 1 145 1.0E-50 T 28-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain APY29_RS03135 9e9501419e9dff66ef565784c797e1cd 146 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 146 33.419 T 28-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 APY29_RS08425 1b6201e7038b3fea71e4421db712fe7c 414 Pfam PF04235 Protein of unknown function (DUF418) 245 401 5.7E-41 T 28-03-2018 IPR007349 Domain of unknown function DUF418 APY29_RS13660 1b6808393106d40e657c295f0b308129 421 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 19 409 1.7E-116 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 APY29_RS13660 1b6808393106d40e657c295f0b308129 421 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 17 411 28.996 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 APY29_RS13660 1b6808393106d40e657c295f0b308129 421 PIRSF PIRSF004640 12 419 8.8E-125 T 28-03-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 APY29_RS13660 1b6808393106d40e657c295f0b308129 421 Gene3D G3DSA:3.20.20.70 19 270 0.0012 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS13660 1b6808393106d40e657c295f0b308129 421 Pfam PF04551 GcpE protein 22 409 1.3E-107 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 APY29_RS03675 54be39a0168b814553cad981da4b921c 191 Pfam PF11454 Protein of unknown function (DUF3016) 42 180 8.8E-52 T 28-03-2018 IPR021557 Protein of unknown function DUF3016 APY29_RS08985 1d27efeb80f446e658f8282de95c944e 389 Pfam PF03743 Bacterial conjugation TrbI-like protein 198 383 1.3E-45 T 28-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI APY29_RS09230 e59ed360319407e41c4f75df29e9f050 384 SUPERFAMILY SSF53448 45 276 1.83E-14 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS09230 e59ed360319407e41c4f75df29e9f050 384 Gene3D G3DSA:3.90.550.10 26 282 4.1E-12 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS09230 e59ed360319407e41c4f75df29e9f050 384 Pfam PF13506 Glycosyl transferase family 21 103 272 1.2E-34 T 28-03-2018 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|MetaCyc: PWY-7836|MetaCyc: PWY-7838|MetaCyc: PWY-7839|MetaCyc: PWY-7841|Reactome: R-HSA-1660662 APY29_RS03845 8350c46a7234ef298e653b6a09f731e9 234 Gene3D G3DSA:2.40.160.20 3 178 5.0E-8 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APY29_RS03845 8350c46a7234ef298e653b6a09f731e9 234 SUPERFAMILY SSF56925 54 177 3.14E-5 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APY29_RS03845 8350c46a7234ef298e653b6a09f731e9 234 Gene3D G3DSA:2.40.160.20 179 234 0.0011 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APY29_RS03300 14b0b9780bb2e409bf0f47aaefe9f571 478 Pfam PF12040 Domain of unknown function (DUF3526) 271 438 1.1E-47 T 28-03-2018 IPR021913 Protein of unknown function DUF3526 APY29_RS03300 14b0b9780bb2e409bf0f47aaefe9f571 478 Pfam PF12679 ABC-2 family transporter protein 7 260 3.2E-23 T 28-03-2018 IPR032688 ABC-2 family transporter protein GO:0006810 APY29_RS03330 68002762ddd5c76a4865f9449f710135 245 Pfam PF11828 Protein of unknown function (DUF3348) 1 243 9.7E-84 T 28-03-2018 IPR021783 Protein of unknown function DUF3348 APY29_RS11405 1bab6f824039eb98bfad807693d31c48 220 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 155 183 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 APY29_RS11405 1bab6f824039eb98bfad807693d31c48 220 SUPERFAMILY SSF51161 10 205 3.93E-38 T 28-03-2018 IPR011004 Trimeric LpxA-like APY29_RS11405 1bab6f824039eb98bfad807693d31c48 220 Gene3D G3DSA:2.160.10.10 5 80 1.8E-11 T 28-03-2018 APY29_RS11405 1bab6f824039eb98bfad807693d31c48 220 Gene3D G3DSA:2.160.10.10 81 196 3.4E-30 T 28-03-2018 APY29_RS11405 1bab6f824039eb98bfad807693d31c48 220 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 151 181 3.5E-8 T 28-03-2018 IPR001451 Hexapeptide repeat APY29_RS11405 1bab6f824039eb98bfad807693d31c48 220 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 44 77 5.4E-7 T 28-03-2018 IPR001451 Hexapeptide repeat APY29_RS11405 1bab6f824039eb98bfad807693d31c48 220 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 98 129 5.3E-5 T 28-03-2018 IPR001451 Hexapeptide repeat APY29_RS21645 0557ff87dd364347b87ffa4b6985f46d 516 SUPERFAMILY SSF51556 217 469 1.82E-61 T 28-03-2018 IPR032466 Metal-dependent hydrolase APY29_RS21645 0557ff87dd364347b87ffa4b6985f46d 516 SUPERFAMILY SSF51556 41 186 1.82E-61 T 28-03-2018 IPR032466 Metal-dependent hydrolase APY29_RS21645 0557ff87dd364347b87ffa4b6985f46d 516 Pfam PF00962 Adenosine/AMP deaminase 319 456 2.1E-21 T 28-03-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 APY29_RS21645 0557ff87dd364347b87ffa4b6985f46d 516 Gene3D G3DSA:3.20.20.140 31 514 3.9E-76 T 28-03-2018 APY29_RS06375 f8b047da72fbb8b762148a20d910aa2e 172 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 67 169 1.2E-42 T 28-03-2018 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 APY29_RS06375 f8b047da72fbb8b762148a20d910aa2e 172 Pfam PF00691 OmpA family 68 163 1.6E-16 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS06375 f8b047da72fbb8b762148a20d910aa2e 172 PRINTS PR01021 OMPA domain signature 99 114 6.6E-13 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APY29_RS06375 f8b047da72fbb8b762148a20d910aa2e 172 PRINTS PR01021 OMPA domain signature 69 91 6.6E-13 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APY29_RS06375 f8b047da72fbb8b762148a20d910aa2e 172 PRINTS PR01021 OMPA domain signature 114 130 6.6E-13 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APY29_RS06375 f8b047da72fbb8b762148a20d910aa2e 172 SUPERFAMILY SSF103088 65 169 1.02E-31 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS06375 f8b047da72fbb8b762148a20d910aa2e 172 Gene3D G3DSA:3.30.1330.60 22 172 3.3E-32 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS09870 0b238f4824a55737561dc5550a82325a 214 Gene3D G3DSA:3.40.30.10 1 77 7.4E-24 T 28-03-2018 APY29_RS09870 0b238f4824a55737561dc5550a82325a 214 SUPERFAMILY SSF52833 6 88 7.34E-24 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS09870 0b238f4824a55737561dc5550a82325a 214 SUPERFAMILY SSF47616 86 199 1.81E-17 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like APY29_RS09870 0b238f4824a55737561dc5550a82325a 214 Gene3D G3DSA:1.20.1050.10 78 205 3.5E-18 T 28-03-2018 APY29_RS09870 0b238f4824a55737561dc5550a82325a 214 Pfam PF02798 Glutathione S-transferase, N-terminal domain 7 79 6.0E-15 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APY29_RS01395 b7db2bec15e3fdc11ba3577ad0722ee2 627 Pfam PF05947 Type VI secretion system, TssF 6 625 5.3E-223 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like APY29_RS01395 b7db2bec15e3fdc11ba3577ad0722ee2 627 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 625 5.6E-210 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like APY29_RS01395 b7db2bec15e3fdc11ba3577ad0722ee2 627 PIRSF PIRSF028304 1 627 9.4E-184 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like APY29_RS13750 d4a09008aea9fa717142cb92568dcaca 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 90 101 - T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 APY29_RS13750 d4a09008aea9fa717142cb92568dcaca 161 SUPERFAMILY SSF55083 1 149 3.53E-50 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 APY29_RS13750 d4a09008aea9fa717142cb92568dcaca 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 135 1.1E-34 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 APY29_RS13750 d4a09008aea9fa717142cb92568dcaca 161 Gene3D G3DSA:3.30.70.560 1 156 1.4E-54 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 APY29_RS13750 d4a09008aea9fa717142cb92568dcaca 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 135 2.1E-43 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 APY29_RS09850 9b84bb26f195b188a2874ca5e6f80472 161 SUPERFAMILY SSF55486 24 157 1.0E-44 T 28-03-2018 APY29_RS09850 9b84bb26f195b188a2874ca5e6f80472 161 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 121 131 - T 28-03-2018 IPR020549 Endoribonuclease YbeY, conserved site APY29_RS09850 9b84bb26f195b188a2874ca5e6f80472 161 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 43 152 5.8E-37 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APY29_RS09850 9b84bb26f195b188a2874ca5e6f80472 161 Gene3D G3DSA:3.40.390.30 6 161 2.1E-48 T 28-03-2018 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 APY29_RS09850 9b84bb26f195b188a2874ca5e6f80472 161 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 7 155 23.746 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APY29_RS09850 9b84bb26f195b188a2874ca5e6f80472 161 Pfam PF02130 Uncharacterized protein family UPF0054 27 150 2.5E-35 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APY29_RS00040 3930a6fb8f0652c5f9d20aa8e4b85b7e 221 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 144 221 1.5E-25 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 APY29_RS00040 3930a6fb8f0652c5f9d20aa8e4b85b7e 221 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 143 220 1.3E-22 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 APY29_RS00040 3930a6fb8f0652c5f9d20aa8e4b85b7e 221 PRINTS PR01217 Proline rich extensin signature 57 69 2.0E-9 T 28-03-2018 APY29_RS00040 3930a6fb8f0652c5f9d20aa8e4b85b7e 221 PRINTS PR01217 Proline rich extensin signature 92 108 2.0E-9 T 28-03-2018 APY29_RS00040 3930a6fb8f0652c5f9d20aa8e4b85b7e 221 PRINTS PR01217 Proline rich extensin signature 110 127 2.0E-9 T 28-03-2018 APY29_RS00040 3930a6fb8f0652c5f9d20aa8e4b85b7e 221 PRINTS PR01217 Proline rich extensin signature 71 92 2.0E-9 T 28-03-2018 APY29_RS00040 3930a6fb8f0652c5f9d20aa8e4b85b7e 221 Gene3D G3DSA:3.30.1150.10 47 221 1.0E-20 T 28-03-2018 APY29_RS00040 3930a6fb8f0652c5f9d20aa8e4b85b7e 221 SUPERFAMILY SSF74653 142 218 8.11E-22 T 28-03-2018 APY29_RS12315 c5131e69fb766200405be5cba27a03e5 216 ProSitePatterns PS00398 Site-specific recombinases signature 2. 70 82 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 APY29_RS12315 c5131e69fb766200405be5cba27a03e5 216 Gene3D G3DSA:1.10.10.60 170 209 2.6E-5 T 28-03-2018 APY29_RS12315 c5131e69fb766200405be5cba27a03e5 216 SUPERFAMILY SSF53041 11 165 1.44E-26 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APY29_RS12315 c5131e69fb766200405be5cba27a03e5 216 SMART SM00857 12 165 6.2E-27 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APY29_RS12315 c5131e69fb766200405be5cba27a03e5 216 Gene3D G3DSA:3.40.50.1390 8 169 2.6E-35 T 28-03-2018 APY29_RS12315 c5131e69fb766200405be5cba27a03e5 216 Pfam PF00239 Resolvase, N terminal domain 13 165 3.7E-22 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 APY29_RS10540 7f9b0801f4f0439a8465375c18b50660 340 SUPERFAMILY SSF53822 64 335 1.01E-68 T 28-03-2018 IPR028082 Periplasmic binding protein-like I APY29_RS10540 7f9b0801f4f0439a8465375c18b50660 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 51 3.6E-14 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS10540 7f9b0801f4f0439a8465375c18b50660 340 Gene3D G3DSA:3.40.50.2300 179 336 7.2E-43 T 28-03-2018 APY29_RS10540 7f9b0801f4f0439a8465375c18b50660 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 3.2E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS10540 7f9b0801f4f0439a8465375c18b50660 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 3.2E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS10540 7f9b0801f4f0439a8465375c18b50660 340 Gene3D G3DSA:1.10.260.40 6 59 1.9E-22 T 28-03-2018 APY29_RS10540 7f9b0801f4f0439a8465375c18b50660 340 SMART SM00354 5 75 2.5E-24 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 APY29_RS10540 7f9b0801f4f0439a8465375c18b50660 340 SUPERFAMILY SSF47413 5 63 2.63E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APY29_RS10540 7f9b0801f4f0439a8465375c18b50660 340 Gene3D G3DSA:3.40.50.2300 60 178 8.1E-32 T 28-03-2018 APY29_RS10540 7f9b0801f4f0439a8465375c18b50660 340 Pfam PF13377 Periplasmic binding protein-like domain 172 333 2.4E-37 T 28-03-2018 APY29_RS10540 7f9b0801f4f0439a8465375c18b50660 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 28-03-2018 APY29_RS03625 f803eb04fae8dadba188338c2e2b4908 94 Pfam PF13223 Protein of unknown function (DUF4031) 3 80 4.3E-29 T 28-03-2018 IPR025109 Domain of unknown function DUF4031 APY29_RS21935 884d52c8a9f449a1af931094872e8470 419 Gene3D G3DSA:1.20.91.10 250 332 2.9E-17 T 28-03-2018 APY29_RS21935 884d52c8a9f449a1af931094872e8470 419 Pfam PF00999 Sodium/hydrogen exchanger family 13 398 5.4E-53 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APY29_RS16455 c1d4309e3b925dc1f0f7683a8758b88a 290 Gene3D G3DSA:3.30.565.10 128 290 2.0E-40 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16455 c1d4309e3b925dc1f0f7683a8758b88a 290 SUPERFAMILY SSF47384 39 125 3.92E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS16455 c1d4309e3b925dc1f0f7683a8758b88a 290 PRINTS PR00344 Bacterial sensor protein C-terminal signature 225 235 1.1E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS16455 c1d4309e3b925dc1f0f7683a8758b88a 290 PRINTS PR00344 Bacterial sensor protein C-terminal signature 207 221 1.1E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS16455 c1d4309e3b925dc1f0f7683a8758b88a 290 PRINTS PR00344 Bacterial sensor protein C-terminal signature 266 279 1.1E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS16455 c1d4309e3b925dc1f0f7683a8758b88a 290 PRINTS PR00344 Bacterial sensor protein C-terminal signature 242 260 1.1E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS16455 c1d4309e3b925dc1f0f7683a8758b88a 290 SMART SM00387 170 282 8.2E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16455 c1d4309e3b925dc1f0f7683a8758b88a 290 SUPERFAMILY SSF55874 113 281 6.16E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16455 c1d4309e3b925dc1f0f7683a8758b88a 290 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 171 281 3.0E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS16455 c1d4309e3b925dc1f0f7683a8758b88a 290 Pfam PF00512 His Kinase A (phospho-acceptor) domain 57 124 2.7E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS16455 c1d4309e3b925dc1f0f7683a8758b88a 290 Gene3D G3DSA:1.10.287.130 46 120 5.5E-15 T 28-03-2018 APY29_RS16455 c1d4309e3b925dc1f0f7683a8758b88a 290 SMART SM00388 56 124 8.5E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APY29_RS17900 a45c6b32d2ea379e391899a8c80afc9b 375 Gene3D G3DSA:2.30.30.60 196 245 6.1E-7 T 28-03-2018 APY29_RS17900 a45c6b32d2ea379e391899a8c80afc9b 375 SUPERFAMILY SSF50182 179 244 7.85E-13 T 28-03-2018 IPR010920 LSM domain APY29_RS17900 a45c6b32d2ea379e391899a8c80afc9b 375 Pfam PF00924 Mechanosensitive ion channel 139 331 1.9E-23 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APY29_RS23440 b72fa59900015ccfba2ec0cda8295f29 425 Gene3D G3DSA:1.10.530.10 229 353 3.3E-35 T 28-03-2018 APY29_RS23440 b72fa59900015ccfba2ec0cda8295f29 425 Gene3D G3DSA:1.10.101.10 362 425 9.5E-14 T 28-03-2018 IPR002477 Peptidoglycan binding-like APY29_RS23440 b72fa59900015ccfba2ec0cda8295f29 425 SUPERFAMILY SSF47090 365 423 8.95E-16 T 28-03-2018 IPR002477 Peptidoglycan binding-like APY29_RS23440 b72fa59900015ccfba2ec0cda8295f29 425 Gene3D G3DSA:1.10.8.350 121 222 6.3E-29 T 28-03-2018 APY29_RS23440 b72fa59900015ccfba2ec0cda8295f29 425 Pfam PF01471 Putative peptidoglycan binding domain 368 422 2.6E-11 T 28-03-2018 IPR002477 Peptidoglycan binding-like APY29_RS23440 b72fa59900015ccfba2ec0cda8295f29 425 SUPERFAMILY SSF53955 50 350 1.55E-90 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS23440 b72fa59900015ccfba2ec0cda8295f29 425 Pfam PF13406 Transglycosylase SLT domain 52 345 1.4E-103 T 28-03-2018 IPR031304 Transglycosylase SLT domain 2 APY29_RS23440 b72fa59900015ccfba2ec0cda8295f29 425 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 52 348 4.4E-111 T 28-03-2018 IPR011970 Lytic murein transglycosylase APY29_RS14315 b72fa59900015ccfba2ec0cda8295f29 425 Gene3D G3DSA:1.10.530.10 229 353 3.3E-35 T 28-03-2018 APY29_RS14315 b72fa59900015ccfba2ec0cda8295f29 425 Gene3D G3DSA:1.10.101.10 362 425 9.5E-14 T 28-03-2018 IPR002477 Peptidoglycan binding-like APY29_RS14315 b72fa59900015ccfba2ec0cda8295f29 425 SUPERFAMILY SSF47090 365 423 8.95E-16 T 28-03-2018 IPR002477 Peptidoglycan binding-like APY29_RS14315 b72fa59900015ccfba2ec0cda8295f29 425 Gene3D G3DSA:1.10.8.350 121 222 6.3E-29 T 28-03-2018 APY29_RS14315 b72fa59900015ccfba2ec0cda8295f29 425 Pfam PF01471 Putative peptidoglycan binding domain 368 422 2.6E-11 T 28-03-2018 IPR002477 Peptidoglycan binding-like APY29_RS14315 b72fa59900015ccfba2ec0cda8295f29 425 SUPERFAMILY SSF53955 50 350 1.55E-90 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS14315 b72fa59900015ccfba2ec0cda8295f29 425 Pfam PF13406 Transglycosylase SLT domain 52 345 1.4E-103 T 28-03-2018 IPR031304 Transglycosylase SLT domain 2 APY29_RS14315 b72fa59900015ccfba2ec0cda8295f29 425 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 52 348 4.4E-111 T 28-03-2018 IPR011970 Lytic murein transglycosylase APY29_RS01600 a910ab5105c74897b727ecf235cec3cc 435 Gene3D G3DSA:3.40.50.980 123 283 4.2E-22 T 28-03-2018 APY29_RS01600 a910ab5105c74897b727ecf235cec3cc 435 SUPERFAMILY SSF56801 5 429 1.7E-42 T 28-03-2018 APY29_RS01600 a910ab5105c74897b727ecf235cec3cc 435 Gene3D G3DSA:3.30.300.30 335 434 1.0E-9 T 28-03-2018 APY29_RS01600 a910ab5105c74897b727ecf235cec3cc 435 Pfam PF00501 AMP-binding enzyme 101 292 3.0E-18 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APY29_RS01600 a910ab5105c74897b727ecf235cec3cc 435 Gene3D G3DSA:3.40.50.980 1 122 1.2E-4 T 28-03-2018 APY29_RS19655 2ca343abe2c58845768267e66150b212 353 Gene3D G3DSA:2.40.128.140 32 350 1.5E-103 T 28-03-2018 IPR018707 Protein of unknown function DUF2219 APY29_RS19655 2ca343abe2c58845768267e66150b212 353 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 44 350 5.6E-92 T 28-03-2018 IPR018707 Protein of unknown function DUF2219 APY29_RS01855 194f22fa19214250687681c5536f2d66 475 Pfam PF03929 PepSY-associated TM region 1 261 8.0E-9 T 28-03-2018 IPR005625 PepSY-associated TM protein APY29_RS18240 108cbe88b07f41c69535ccf1fd955cb3 114 Pfam PF09842 Predicted membrane protein (DUF2069) 12 94 8.1E-8 T 28-03-2018 IPR018643 Protein of unknown function DUF2069, membrane APY29_RS23185 938d9678a0424f5a79dc2fa56efe2b91 181 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 7 150 2.2E-48 T 28-03-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 APY29_RS23185 938d9678a0424f5a79dc2fa56efe2b91 181 Pfam PF02470 MlaD protein 41 119 3.5E-20 T 28-03-2018 IPR003399 Mce/MlaD APY29_RS18670 1df940600c321467f4d75b5339eaf9db 187 TIGRFAM TIGR03566 FMN_reduc_MsuE: FMN reductase 6 177 5.2E-79 T 28-03-2018 IPR019912 FMN reductase, MsuE-like KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 APY29_RS18670 1df940600c321467f4d75b5339eaf9db 187 Gene3D G3DSA:3.40.50.360 2 182 4.5E-31 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS18670 1df940600c321467f4d75b5339eaf9db 187 SUPERFAMILY SSF52218 1 181 2.33E-32 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS18670 1df940600c321467f4d75b5339eaf9db 187 Pfam PF03358 NADPH-dependent FMN reductase 6 148 1.6E-29 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APY29_RS05370 b6a8c3a4deb6709f39645296c0cfd973 320 Gene3D G3DSA:3.40.50.410 80 241 1.3E-14 T 28-03-2018 IPR002035 von Willebrand factor, type A APY29_RS05370 b6a8c3a4deb6709f39645296c0cfd973 320 Pfam PF01882 Protein of unknown function DUF58 68 151 6.4E-19 T 28-03-2018 IPR002881 Domain of unknown function DUF58 APY29_RS00660 b68f4a9a2ac68cce9af0408c81864177 352 Pfam PF00171 Aldehyde dehydrogenase family 30 323 1.5E-98 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APY29_RS00660 b68f4a9a2ac68cce9af0408c81864177 352 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 297 308 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APY29_RS00660 b68f4a9a2ac68cce9af0408c81864177 352 Gene3D G3DSA:3.40.309.10 283 329 3.4E-11 T 28-03-2018 APY29_RS00660 b68f4a9a2ac68cce9af0408c81864177 352 Gene3D G3DSA:3.40.605.10 10 282 7.1E-95 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APY29_RS00660 b68f4a9a2ac68cce9af0408c81864177 352 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APY29_RS00660 b68f4a9a2ac68cce9af0408c81864177 352 SUPERFAMILY SSF53720 16 327 1.23E-102 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APY29_RS18850 bccc218dfa1fea82662e7c56ddc5203d 275 Pfam PF08241 Methyltransferase domain 46 142 7.0E-21 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APY29_RS18850 bccc218dfa1fea82662e7c56ddc5203d 275 Gene3D G3DSA:3.40.50.150 9 207 4.4E-31 T 28-03-2018 APY29_RS18850 bccc218dfa1fea82662e7c56ddc5203d 275 SUPERFAMILY SSF53335 20 229 2.76E-37 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS14855 86d65169218012421a3762e4943cb4a9 260 SUPERFAMILY SSF52096 2 260 1.78E-88 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS14855 86d65169218012421a3762e4943cb4a9 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 259 4.7E-67 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APY29_RS14855 86d65169218012421a3762e4943cb4a9 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 APY29_RS14855 86d65169218012421a3762e4943cb4a9 260 Gene3D G3DSA:1.10.12.10 218 260 3.9E-16 T 28-03-2018 IPR014748 Crontonase, C-terminal APY29_RS14855 86d65169218012421a3762e4943cb4a9 260 Gene3D G3DSA:3.90.226.10 5 217 3.0E-73 T 28-03-2018 APY29_RS17260 857de73214bd3b20f752d82c1db972f7 128 Gene3D G3DSA:3.40.50.2300 1 128 8.7E-39 T 28-03-2018 APY29_RS17260 857de73214bd3b20f752d82c1db972f7 128 SUPERFAMILY SSF52172 1 123 6.12E-39 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS17260 857de73214bd3b20f752d82c1db972f7 128 Pfam PF00072 Response regulator receiver domain 4 114 3.3E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS17260 857de73214bd3b20f752d82c1db972f7 128 SMART SM00448 2 115 2.0E-39 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS13435 9cdc38b91d69c065eef83328292c7ebd 493 PIRSF PIRSF006060 24 492 4.5E-90 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APY29_RS13435 9cdc38b91d69c065eef83328292c7ebd 493 Pfam PF13520 Amino acid permease 44 461 7.8E-62 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APY29_RS12900 20f1de969980677eb487ea4945744770 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 80 99 9.3E-61 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APY29_RS12900 20f1de969980677eb487ea4945744770 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 207 227 9.3E-61 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APY29_RS12900 20f1de969980677eb487ea4945744770 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 99 119 9.3E-61 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APY29_RS12900 20f1de969980677eb487ea4945744770 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 119 138 9.3E-61 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APY29_RS12900 20f1de969980677eb487ea4945744770 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 228 249 9.3E-61 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APY29_RS12900 20f1de969980677eb487ea4945744770 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 252 277 9.3E-61 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APY29_RS12900 20f1de969980677eb487ea4945744770 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 178 190 8.7E-17 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APY29_RS12900 20f1de969980677eb487ea4945744770 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 268 278 8.7E-17 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APY29_RS12900 20f1de969980677eb487ea4945744770 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 200 212 8.7E-17 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APY29_RS12900 20f1de969980677eb487ea4945744770 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 78 87 8.7E-17 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APY29_RS12900 20f1de969980677eb487ea4945744770 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 138 150 8.7E-17 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APY29_RS12900 20f1de969980677eb487ea4945744770 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 150 164 8.7E-17 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APY29_RS12900 20f1de969980677eb487ea4945744770 281 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 82 278 1.7E-76 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APY29_RS12900 20f1de969980677eb487ea4945744770 281 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 255 267 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APY29_RS12900 20f1de969980677eb487ea4945744770 281 Pfam PF00813 FliP family 82 274 3.4E-72 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APY29_RS12900 20f1de969980677eb487ea4945744770 281 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 207 222 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APY29_RS20870 7f5991098a8aa27db263780001f543ca 298 Pfam PF03301 Tryptophan 2,3-dioxygenase 18 145 4.7E-41 T 28-03-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 APY29_RS20870 7f5991098a8aa27db263780001f543ca 298 Pfam PF03301 Tryptophan 2,3-dioxygenase 208 281 6.9E-21 T 28-03-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 APY29_RS20870 7f5991098a8aa27db263780001f543ca 298 SUPERFAMILY SSF140959 23 282 7.19E-97 T 28-03-2018 APY29_RS20870 7f5991098a8aa27db263780001f543ca 298 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 17 282 39.141 T 28-03-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 APY29_RS19050 bf6cb43c084d15f4e34fe614da906938 458 Pfam PF01098 Cell cycle protein 24 373 1.1E-98 T 28-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 APY29_RS19050 bf6cb43c084d15f4e34fe614da906938 458 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 17 381 39.359 T 28-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 APY29_RS19050 bf6cb43c084d15f4e34fe614da906938 458 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 19 372 6.7E-126 T 28-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 APY29_RS04560 2edf311243d5078eaa0f897135f4c3b3 635 Gene3D G3DSA:3.90.550.10 226 503 3.7E-37 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS04560 2edf311243d5078eaa0f897135f4c3b3 635 Pfam PF13641 Glycosyltransferase like family 2 258 482 1.4E-23 T 28-03-2018 APY29_RS04560 2edf311243d5078eaa0f897135f4c3b3 635 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 27 160 6.3E-16 T 28-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 APY29_RS04560 2edf311243d5078eaa0f897135f4c3b3 635 SUPERFAMILY SSF53448 259 507 7.5E-42 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS04560 2edf311243d5078eaa0f897135f4c3b3 635 SUPERFAMILY SSF160246 23 155 1.33E-23 T 28-03-2018 APY29_RS20300 75feffc3057cba89d62d02b5e913a2cb 315 Pfam PF06258 Mitochondrial fission ELM1 12 313 1.6E-77 T 28-03-2018 IPR009367 Mitochondrial fission protein ELM1-like APY29_RS12015 ae9d2e94fa58819b28576aa8ca54f587 457 Pfam PF00144 Beta-lactamase 46 344 9.2E-65 T 28-03-2018 IPR001466 Beta-lactamase-related APY29_RS12015 ae9d2e94fa58819b28576aa8ca54f587 457 Gene3D G3DSA:3.40.710.10 36 363 6.3E-78 T 28-03-2018 APY29_RS12015 ae9d2e94fa58819b28576aa8ca54f587 457 SUPERFAMILY SSF56601 43 350 5.64E-81 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like APY29_RS23695 08f530ac691293d867648e05462db143 66 Pfam PF01527 Transposase 2 66 1.7E-20 T 28-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APY29_RS23695 08f530ac691293d867648e05462db143 66 Gene3D G3DSA:1.10.10.10 1 66 5.5E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS23695 08f530ac691293d867648e05462db143 66 SUPERFAMILY SSF46689 2 66 4.48E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 APY29_RS02885 841cc3740fa29528e7b87799148a12e7 97 Gene3D G3DSA:3.10.350.10 42 97 2.3E-17 T 28-03-2018 APY29_RS02885 841cc3740fa29528e7b87799148a12e7 97 Pfam PF01476 LysM domain 46 94 2.2E-13 T 28-03-2018 IPR018392 LysM domain APY29_RS02885 841cc3740fa29528e7b87799148a12e7 97 SMART SM00257 45 94 2.3E-6 T 28-03-2018 IPR018392 LysM domain APY29_RS02885 841cc3740fa29528e7b87799148a12e7 97 SUPERFAMILY SSF54106 46 94 3.01E-7 T 28-03-2018 IPR018392 LysM domain APY29_RS11885 e19ce79c3eb4439138c96a7a1e0d08d8 91 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 2 84 2.5E-13 T 28-03-2018 APY29_RS11885 e19ce79c3eb4439138c96a7a1e0d08d8 91 SUPERFAMILY SSF51735 2 85 6.27E-19 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS11885 e19ce79c3eb4439138c96a7a1e0d08d8 91 Gene3D G3DSA:3.40.50.720 1 90 1.1E-15 T 28-03-2018 APY29_RS11885 e19ce79c3eb4439138c96a7a1e0d08d8 91 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 18 3.1E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS11885 e19ce79c3eb4439138c96a7a1e0d08d8 91 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 49 69 3.1E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS05250 acbab4e52531e7e6d56badf839423ffd 115 Pfam PF07238 PilZ domain 6 109 1.3E-7 T 28-03-2018 IPR009875 PilZ domain GO:0035438 APY29_RS05250 acbab4e52531e7e6d56badf839423ffd 115 Gene3D G3DSA:2.40.10.220 1 114 2.0E-10 T 28-03-2018 APY29_RS16870 e6b29f84c9bb469395208c098cbf9162 238 SMART SM00862 147 221 1.2E-14 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS16870 e6b29f84c9bb469395208c098cbf9162 238 Gene3D G3DSA:3.40.50.2300 1 122 9.4E-34 T 28-03-2018 APY29_RS16870 e6b29f84c9bb469395208c098cbf9162 238 SUPERFAMILY SSF52172 1 172 1.1E-37 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS16870 e6b29f84c9bb469395208c098cbf9162 238 Gene3D G3DSA:1.10.10.10 123 228 3.7E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS16870 e6b29f84c9bb469395208c098cbf9162 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 1.5E-15 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS16870 e6b29f84c9bb469395208c098cbf9162 238 SMART SM00448 1 113 6.3E-40 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS16870 e6b29f84c9bb469395208c098cbf9162 238 Pfam PF00072 Response regulator receiver domain 4 113 1.5E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS22750 b737bc330b1a3191525bee13e5230481 495 Pfam PF13347 MFS/sugar transport protein 15 277 5.7E-55 T 28-03-2018 APY29_RS22750 b737bc330b1a3191525bee13e5230481 495 Pfam PF13347 MFS/sugar transport protein 305 473 2.6E-30 T 28-03-2018 APY29_RS22750 b737bc330b1a3191525bee13e5230481 495 Gene3D G3DSA:1.20.1250.20 9 216 1.5E-16 T 28-03-2018 APY29_RS22750 b737bc330b1a3191525bee13e5230481 495 SUPERFAMILY SSF103473 11 263 2.75E-29 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS22750 b737bc330b1a3191525bee13e5230481 495 SUPERFAMILY SSF103473 304 438 2.75E-29 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS22750 b737bc330b1a3191525bee13e5230481 495 Gene3D G3DSA:1.20.1250.20 217 491 4.9E-18 T 28-03-2018 APY29_RS15495 dccd1ab5939f5bd1d4264a481188eb56 95 Pfam PF14542 GCN5-related N-acetyl-transferase 17 93 4.3E-27 T 28-03-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase APY29_RS15495 dccd1ab5939f5bd1d4264a481188eb56 95 SUPERFAMILY SSF55729 7 94 1.1E-26 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS15495 dccd1ab5939f5bd1d4264a481188eb56 95 Gene3D G3DSA:3.40.630.30 2 95 7.0E-22 T 28-03-2018 APY29_RS23180 4652114ccc34858e2476152dec5bf0df 249 Pfam PF02405 Permease MlaE 35 245 4.0E-68 T 28-03-2018 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 APY29_RS23180 4652114ccc34858e2476152dec5bf0df 249 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 4 249 2.2E-76 T 28-03-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria APY29_RS00505 e1ad41aefd9524c0045f7b7a9c2af332 99 Gene3D G3DSA:3.30.2310.20 1 94 1.9E-9 T 28-03-2018 APY29_RS00505 e1ad41aefd9524c0045f7b7a9c2af332 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 91 3.9E-20 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family APY29_RS05380 622ff53dc2407793bc5713e35242faa1 335 Pfam PF00092 von Willebrand factor type A domain 101 291 7.7E-26 T 28-03-2018 IPR002035 von Willebrand factor, type A APY29_RS05380 622ff53dc2407793bc5713e35242faa1 335 Gene3D G3DSA:3.40.50.410 93 312 3.0E-44 T 28-03-2018 IPR002035 von Willebrand factor, type A APY29_RS05380 622ff53dc2407793bc5713e35242faa1 335 SMART SM00327 98 298 7.0E-23 T 28-03-2018 IPR002035 von Willebrand factor, type A APY29_RS05380 622ff53dc2407793bc5713e35242faa1 335 SUPERFAMILY SSF53300 96 294 3.12E-36 T 28-03-2018 IPR002035 von Willebrand factor, type A APY29_RS13920 511f254b5608d5de1469f9086f2b26c2 290 Gene3D G3DSA:3.40.50.1820 12 279 4.8E-26 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS13920 511f254b5608d5de1469f9086f2b26c2 290 PIRSF PIRSF037442 1 288 1.7E-70 T 28-03-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 APY29_RS13920 511f254b5608d5de1469f9086f2b26c2 290 SUPERFAMILY SSF53474 14 278 1.17E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS13920 511f254b5608d5de1469f9086f2b26c2 290 Pfam PF12146 Serine aminopeptidase, S33 28 163 1.3E-14 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 APY29_RS22670 b146fcbdc0e7ac5e6b0cff0b999eba7e 186 SUPERFAMILY SSF53639 61 155 7.85E-5 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal APY29_RS22670 b146fcbdc0e7ac5e6b0cff0b999eba7e 186 Gene3D G3DSA:3.40.225.10 86 173 0.033 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal APY29_RS18655 94d642bcdc6d3d4d9cae3f7ecdb6c0e9 430 Gene3D G3DSA:2.40.110.10 131 232 6.0E-16 T 28-03-2018 APY29_RS18655 94d642bcdc6d3d4d9cae3f7ecdb6c0e9 430 PIRSF PIRSF016578 8 394 7.2E-21 T 28-03-2018 APY29_RS18655 94d642bcdc6d3d4d9cae3f7ecdb6c0e9 430 SUPERFAMILY SSF47203 245 386 4.57E-10 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APY29_RS18655 94d642bcdc6d3d4d9cae3f7ecdb6c0e9 430 Gene3D G3DSA:1.10.540.10 17 130 1.6E-10 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 APY29_RS18655 94d642bcdc6d3d4d9cae3f7ecdb6c0e9 430 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 250 384 4.0E-10 T 28-03-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain APY29_RS18655 94d642bcdc6d3d4d9cae3f7ecdb6c0e9 430 SUPERFAMILY SSF56645 29 228 5.76E-39 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APY29_RS18655 94d642bcdc6d3d4d9cae3f7ecdb6c0e9 430 Gene3D G3DSA:1.20.140.10 239 410 1.7E-13 T 28-03-2018 APY29_RS23305 b6d4c136d0d1f70bb11a598a6e57017f 318 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 6 312 2.8E-121 T 28-03-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 APY29_RS23305 b6d4c136d0d1f70bb11a598a6e57017f 318 Pfam PF03741 Integral membrane protein TerC family 80 282 1.8E-54 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 APY29_RS22115 41e4a308e06564745cd5b1b10a04f94e 341 Gene3D G3DSA:1.10.1040.10 192 340 4.2E-49 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APY29_RS22115 41e4a308e06564745cd5b1b10a04f94e 341 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 325 39.295 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 APY29_RS22115 41e4a308e06564745cd5b1b10a04f94e 341 SUPERFAMILY SSF48179 182 335 9.69E-52 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APY29_RS22115 41e4a308e06564745cd5b1b10a04f94e 341 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 321 2.5E-47 T 28-03-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 APY29_RS22115 41e4a308e06564745cd5b1b10a04f94e 341 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 APY29_RS22115 41e4a308e06564745cd5b1b10a04f94e 341 PIRSF PIRSF000114 1 335 5.8E-99 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 APY29_RS22115 41e4a308e06564745cd5b1b10a04f94e 341 SUPERFAMILY SSF51735 6 183 1.21E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS22115 41e4a308e06564745cd5b1b10a04f94e 341 Gene3D G3DSA:3.40.50.720 2 182 1.9E-43 T 28-03-2018 APY29_RS22115 41e4a308e06564745cd5b1b10a04f94e 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 7.4E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 APY29_RS22115 41e4a308e06564745cd5b1b10a04f94e 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 7.4E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 APY29_RS22115 41e4a308e06564745cd5b1b10a04f94e 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 7.4E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 APY29_RS22115 41e4a308e06564745cd5b1b10a04f94e 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 7.4E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 APY29_RS22115 41e4a308e06564745cd5b1b10a04f94e 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 7.4E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 APY29_RS22115 41e4a308e06564745cd5b1b10a04f94e 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 7.4E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 APY29_RS22115 41e4a308e06564745cd5b1b10a04f94e 341 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 162 5.6E-51 T 28-03-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 APY29_RS19490 3a39eaa03fdf680982656c2979c9931e 400 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 397 1.1E-136 T 28-03-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 APY29_RS19490 3a39eaa03fdf680982656c2979c9931e 400 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 160 188 - T 28-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 APY29_RS19490 3a39eaa03fdf680982656c2979c9931e 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 379 398 1.4E-29 T 28-03-2018 IPR003004 GspF/PilC family APY29_RS19490 3a39eaa03fdf680982656c2979c9931e 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 62 74 1.4E-29 T 28-03-2018 IPR003004 GspF/PilC family APY29_RS19490 3a39eaa03fdf680982656c2979c9931e 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 363 377 1.4E-29 T 28-03-2018 IPR003004 GspF/PilC family APY29_RS19490 3a39eaa03fdf680982656c2979c9931e 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 160 188 1.4E-29 T 28-03-2018 IPR003004 GspF/PilC family APY29_RS19490 3a39eaa03fdf680982656c2979c9931e 400 Pfam PF00482 Type II secretion system (T2SS), protein F 66 188 5.4E-25 T 28-03-2018 IPR018076 Type II secretion system F domain APY29_RS19490 3a39eaa03fdf680982656c2979c9931e 400 Pfam PF00482 Type II secretion system (T2SS), protein F 269 390 3.6E-27 T 28-03-2018 IPR018076 Type II secretion system F domain APY29_RS19490 3a39eaa03fdf680982656c2979c9931e 400 Gene3D G3DSA:3.30.70.1120 88 162 0.22 T 28-03-2018 APY29_RS06290 545edfd2f6eec20e0ebbfc4faeb2eaa5 414 Gene3D G3DSA:1.20.1250.20 186 406 7.7E-17 T 28-03-2018 APY29_RS06290 545edfd2f6eec20e0ebbfc4faeb2eaa5 414 Gene3D G3DSA:1.20.1250.20 1 185 2.6E-12 T 28-03-2018 APY29_RS06290 545edfd2f6eec20e0ebbfc4faeb2eaa5 414 Pfam PF07690 Major Facilitator Superfamily 201 381 1.0E-12 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS06290 545edfd2f6eec20e0ebbfc4faeb2eaa5 414 Pfam PF07690 Major Facilitator Superfamily 7 182 1.2E-8 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS06290 545edfd2f6eec20e0ebbfc4faeb2eaa5 414 SUPERFAMILY SSF103473 4 380 3.92E-37 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS07695 03d8c46ef1151278c761c6cb5b454822 395 Pfam PF11187 Protein of unknown function (DUF2974) 77 159 1.2E-7 T 28-03-2018 IPR024499 Protein of unknown function DUF2974 APY29_RS07695 03d8c46ef1151278c761c6cb5b454822 395 SUPERFAMILY SSF53474 86 179 1.7E-14 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS07695 03d8c46ef1151278c761c6cb5b454822 395 Gene3D G3DSA:3.40.50.1820 33 395 1.0E-13 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS09815 8e8ac55b4e5853929ff114495cf9d580 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 296 4.5E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS09815 8e8ac55b4e5853929ff114495cf9d580 303 SUPERFAMILY SSF161098 13 294 6.35E-56 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS09815 8e8ac55b4e5853929ff114495cf9d580 303 Gene3D G3DSA:1.10.3720.10 14 299 6.4E-43 T 28-03-2018 APY29_RS19295 8cb6bf4dc7f0fb179d382c08bdcd0890 191 Hamap MF_00723 Glutathione-dependent formaldehyde-activating enzyme [gfa]. 1 191 127.409 T 28-03-2018 IPR014185 Glutathione-dependent formaldehyde-activating enzyme GO:0008270|GO:0046294|GO:0051907 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 APY29_RS19295 8cb6bf4dc7f0fb179d382c08bdcd0890 191 SUPERFAMILY SSF51316 3 190 7.22E-54 T 28-03-2018 IPR011057 Mss4-like APY29_RS19295 8cb6bf4dc7f0fb179d382c08bdcd0890 191 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 49 115 3.4E-10 T 28-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 APY29_RS19295 8cb6bf4dc7f0fb179d382c08bdcd0890 191 Gene3D G3DSA:3.90.1590.10 1 191 5.5E-44 T 28-03-2018 APY29_RS19295 8cb6bf4dc7f0fb179d382c08bdcd0890 191 TIGRFAM TIGR02820 formald_GSH: S-(hydroxymethyl)glutathione synthase 6 187 9.1E-104 T 28-03-2018 IPR014185 Glutathione-dependent formaldehyde-activating enzyme GO:0008270|GO:0046294|GO:0051907 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 APY29_RS19295 8cb6bf4dc7f0fb179d382c08bdcd0890 191 PIRSF PIRSF033318 2 191 2.5E-107 T 28-03-2018 IPR014185 Glutathione-dependent formaldehyde-activating enzyme GO:0008270|GO:0046294|GO:0051907 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 APY29_RS11515 bfb4f73c14700b316ba580df3908edc3 197 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 64 167 7.7E-42 T 28-03-2018 IPR022260 Integrating conjugative element protein PilL, PFGI-1 APY29_RS12510 7d9f8e4469475d07c7b9e5498afd71f5 401 SUPERFAMILY SSF102114 121 351 3.66E-15 T 28-03-2018 APY29_RS12510 7d9f8e4469475d07c7b9e5498afd71f5 401 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 21 383 1.0E-132 T 28-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APY29_RS12510 7d9f8e4469475d07c7b9e5498afd71f5 401 Gene3D G3DSA:3.20.20.70 33 390 1.8E-42 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS12510 7d9f8e4469475d07c7b9e5498afd71f5 401 PIRSF PIRSF006004 17 392 1.2E-146 T 28-03-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APY29_RS12510 7d9f8e4469475d07c7b9e5498afd71f5 401 Pfam PF04055 Radical SAM superfamily 129 300 2.0E-17 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 APY29_RS12510 7d9f8e4469475d07c7b9e5498afd71f5 401 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 22 379 73.535 T 28-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APY29_RS15565 01fc6ccb5c301ef8eea71b2e1aa87d34 161 Pfam PF00210 Ferritin-like domain 9 144 2.7E-34 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APY29_RS15565 01fc6ccb5c301ef8eea71b2e1aa87d34 161 PRINTS PR00601 Bacterioferritin signature 3 22 3.9E-37 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APY29_RS15565 01fc6ccb5c301ef8eea71b2e1aa87d34 161 PRINTS PR00601 Bacterioferritin signature 44 64 3.9E-37 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APY29_RS15565 01fc6ccb5c301ef8eea71b2e1aa87d34 161 PRINTS PR00601 Bacterioferritin signature 106 126 3.9E-37 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APY29_RS15565 01fc6ccb5c301ef8eea71b2e1aa87d34 161 PRINTS PR00601 Bacterioferritin signature 23 43 3.9E-37 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APY29_RS15565 01fc6ccb5c301ef8eea71b2e1aa87d34 161 PRINTS PR00601 Bacterioferritin signature 85 105 3.9E-37 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APY29_RS15565 01fc6ccb5c301ef8eea71b2e1aa87d34 161 PRINTS PR00601 Bacterioferritin signature 128 149 3.9E-37 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APY29_RS15565 01fc6ccb5c301ef8eea71b2e1aa87d34 161 PIRSF PIRSF002560 1 157 4.9E-58 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APY29_RS15565 01fc6ccb5c301ef8eea71b2e1aa87d34 161 TIGRFAM TIGR00754 bfr: bacterioferritin 1 152 3.2E-39 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APY29_RS15565 01fc6ccb5c301ef8eea71b2e1aa87d34 161 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APY29_RS15565 01fc6ccb5c301ef8eea71b2e1aa87d34 161 SUPERFAMILY SSF47240 1 156 5.61E-43 T 28-03-2018 IPR009078 Ferritin-like superfamily APY29_RS15565 01fc6ccb5c301ef8eea71b2e1aa87d34 161 Gene3D G3DSA:1.20.1260.10 1 149 2.1E-36 T 28-03-2018 IPR012347 Ferritin-related APY29_RS01865 16ae1cec7764f7a08b5142055880b672 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 1.3E-21 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 APY29_RS09820 4f8d46bd4c7d60ab141c8c5d0b7ed486 282 SUPERFAMILY SSF161098 5 266 3.55E-52 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS09820 4f8d46bd4c7d60ab141c8c5d0b7ed486 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 270 5.2E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS09820 4f8d46bd4c7d60ab141c8c5d0b7ed486 282 Gene3D G3DSA:1.10.3720.10 10 272 2.5E-40 T 28-03-2018 APY29_RS22715 b592bd190fc8dd59633f812cd383393d 911 Gene3D G3DSA:2.60.120.260 22 273 4.8E-44 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS22715 b592bd190fc8dd59633f812cd383393d 911 SUPERFAMILY SSF49303 271 383 6.47E-13 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APY29_RS22715 b592bd190fc8dd59633f812cd383393d 911 Gene3D G3DSA:3.20.20.80 631 716 3.4E-17 T 28-03-2018 APY29_RS22715 b592bd190fc8dd59633f812cd383393d 911 Gene3D G3DSA:3.20.20.80 385 630 1.0E-39 T 28-03-2018 APY29_RS22715 b592bd190fc8dd59633f812cd383393d 911 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 135 257 8.0E-13 T 28-03-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APY29_RS22715 b592bd190fc8dd59633f812cd383393d 911 SUPERFAMILY SSF49785 124 281 2.67E-45 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS22715 b592bd190fc8dd59633f812cd383393d 911 SUPERFAMILY SSF49785 33 52 2.67E-45 T 28-03-2018 IPR008979 Galactose-binding domain-like APY29_RS22715 b592bd190fc8dd59633f812cd383393d 911 SUPERFAMILY SSF51445 386 717 9.5E-74 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS22715 b592bd190fc8dd59633f812cd383393d 911 Gene3D G3DSA:2.60.40.10 799 911 2.1E-9 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS22715 b592bd190fc8dd59633f812cd383393d 911 Pfam PF00703 Glycosyl hydrolases family 2 271 383 3.6E-11 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APY29_RS22715 b592bd190fc8dd59633f812cd383393d 911 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 496 510 - T 28-03-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 APY29_RS22715 b592bd190fc8dd59633f812cd383393d 911 Pfam PF16355 Domain of unknown function (DUF4982) 732 792 1.5E-23 T 28-03-2018 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APY29_RS22715 b592bd190fc8dd59633f812cd383393d 911 PRINTS PR00132 Glycosyl hydrolase family 2 signature 426 444 1.5E-14 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 APY29_RS22715 b592bd190fc8dd59633f812cd383393d 911 PRINTS PR00132 Glycosyl hydrolase family 2 signature 191 206 1.5E-14 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 APY29_RS22715 b592bd190fc8dd59633f812cd383393d 911 PRINTS PR00132 Glycosyl hydrolase family 2 signature 395 409 1.5E-14 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 APY29_RS22715 b592bd190fc8dd59633f812cd383393d 911 PRINTS PR00132 Glycosyl hydrolase family 2 signature 496 511 1.5E-14 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 APY29_RS22715 b592bd190fc8dd59633f812cd383393d 911 Gene3D G3DSA:2.60.40.10 274 384 9.2E-20 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS22715 b592bd190fc8dd59633f812cd383393d 911 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 390 598 4.8E-29 T 28-03-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 APY29_RS22715 b592bd190fc8dd59633f812cd383393d 911 Gene3D G3DSA:2.60.40.10 719 798 1.3E-27 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS14220 0f1d9e9312f9a5e0037ad477ed0958aa 283 Pfam PF02706 Chain length determinant protein 5 57 2.5E-9 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 APY29_RS14220 0f1d9e9312f9a5e0037ad477ed0958aa 283 Gene3D G3DSA:3.30.1890.10 35 241 0.002 T 28-03-2018 APY29_RS20795 76a9c733a53e76f161c383fdd5549cf7 942 Pfam PF13244 Domain of unknown function (DUF4040) 611 675 7.1E-18 T 28-03-2018 IPR025383 Domain of unknown function DUF4040 APY29_RS20795 76a9c733a53e76f161c383fdd5549cf7 942 Pfam PF00361 Proton-conducting membrane transporter 128 415 1.5E-66 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS20795 76a9c733a53e76f161c383fdd5549cf7 942 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 788 907 1.0E-29 T 28-03-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein APY29_RS20795 76a9c733a53e76f161c383fdd5549cf7 942 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 115 2.5E-10 T 28-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS20795 76a9c733a53e76f161c383fdd5549cf7 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 105 125 2.6E-38 T 28-03-2018 APY29_RS20795 76a9c733a53e76f161c383fdd5549cf7 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 2.6E-38 T 28-03-2018 APY29_RS20795 76a9c733a53e76f161c383fdd5549cf7 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 240 266 2.6E-38 T 28-03-2018 APY29_RS20795 76a9c733a53e76f161c383fdd5549cf7 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 152 173 2.6E-38 T 28-03-2018 APY29_RS20795 76a9c733a53e76f161c383fdd5549cf7 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 308 320 2.6E-38 T 28-03-2018 APY29_RS20795 76a9c733a53e76f161c383fdd5549cf7 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 239 2.6E-38 T 28-03-2018 APY29_RS20795 76a9c733a53e76f161c383fdd5549cf7 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 417 436 2.6E-38 T 28-03-2018 APY29_RS19505 c805dbf7c5eed714f9529ff3e82a449d 269 SUPERFAMILY SSF50156 200 265 2.23E-11 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS19505 c805dbf7c5eed714f9529ff3e82a449d 269 Gene3D G3DSA:2.30.42.10 45 269 6.6E-15 T 28-03-2018 APY29_RS19505 c805dbf7c5eed714f9529ff3e82a449d 269 Pfam PF13180 PDZ domain 214 266 9.2E-8 T 28-03-2018 IPR001478 PDZ domain GO:0005515 APY29_RS19505 c805dbf7c5eed714f9529ff3e82a449d 269 Pfam PF11356 Type II secretion system protein C 79 138 4.2E-8 T 28-03-2018 IPR024961 Type II secretion system protein C, N-terminal APY29_RS07245 0cf270638eb51fbfc0774e8f6ac517f9 264 Pfam PF00326 Prolyl oligopeptidase family 118 245 5.5E-10 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APY29_RS07245 0cf270638eb51fbfc0774e8f6ac517f9 264 SUPERFAMILY SSF53474 31 247 3.0E-35 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS07245 0cf270638eb51fbfc0774e8f6ac517f9 264 Gene3D G3DSA:3.40.50.1820 30 263 5.9E-43 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS22020 2531c5a254d1aef817a3cb42e36a7af5 52 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 51 20.278 T 28-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 APY29_RS22020 2531c5a254d1aef817a3cb42e36a7af5 52 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 1.0E-15 T 28-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 APY29_RS22020 2531c5a254d1aef817a3cb42e36a7af5 52 PIRSF PIRSF036466 1 52 3.3E-22 T 28-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 APY29_RS21085 d6e8d01ff10fd2c1a2da389a8c7f6796 151 TIGRFAM TIGR02561 HrpB1_HrpK: type III secretion protein HrpB1/HrpK 2 145 4.0E-60 T 28-03-2018 IPR013394 Type III secretion system, HrpB1/HrpK APY29_RS21085 d6e8d01ff10fd2c1a2da389a8c7f6796 151 Pfam PF09613 Bacterial type III secretion protein (HrpB1_HrpK) 2 124 6.7E-44 T 28-03-2018 IPR013394 Type III secretion system, HrpB1/HrpK APY29_RS09975 e815fb1fa239b88872bf1f041fc63f31 555 TIGRFAM TIGR04346 DotA_TraY: conjugal transfer/type IV secretion protein DotA/TraY 43 555 4.0E-96 T 28-03-2018 IPR027628 Conjugal transfer/type IV secretion protein DotA/TraY APY29_RS03265 fcf421021e5e47c290c8fb82f9039d7b 216 Pfam PF02525 Flavodoxin-like fold 1 194 5.8E-44 T 28-03-2018 IPR003680 Flavodoxin-like fold APY29_RS03265 fcf421021e5e47c290c8fb82f9039d7b 216 SUPERFAMILY SSF52218 1 203 7.61E-48 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS03265 fcf421021e5e47c290c8fb82f9039d7b 216 Gene3D G3DSA:3.40.50.360 1 208 2.5E-39 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS03265 fcf421021e5e47c290c8fb82f9039d7b 216 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 202 30.718 T 28-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 APY29_RS01370 713571f7316910124cca78291c2fccf6 169 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 161 2.1E-53 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 APY29_RS01370 713571f7316910124cca78291c2fccf6 169 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 9 159 2.3E-55 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 APY29_RS01370 713571f7316910124cca78291c2fccf6 169 PIRSF PIRSF028301 1 168 2.1E-56 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 APY29_RS13590 15ea10dbd0a8f272a762046a6477e298 148 Pfam PF13994 PgaD-like protein 5 137 1.2E-21 T 28-03-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 APY29_RS13590 15ea10dbd0a8f272a762046a6477e298 148 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 3 142 1.6E-47 T 28-03-2018 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 APY29_RS21115 35f43b6946bdcc41d5ee00d48f75d743 86 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.0E-16 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 APY29_RS21115 35f43b6946bdcc41d5ee00d48f75d743 86 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.0E-16 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 APY29_RS21115 35f43b6946bdcc41d5ee00d48f75d743 86 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.0E-16 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 APY29_RS21115 35f43b6946bdcc41d5ee00d48f75d743 86 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 83 1.7E-26 T 28-03-2018 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 APY29_RS21115 35f43b6946bdcc41d5ee00d48f75d743 86 Pfam PF01313 Bacterial export proteins, family 3 6 76 3.1E-19 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 APY29_RS07085 130884bcd9a0348ccb8048c367cfe75f 677 Gene3D G3DSA:1.10.390.10 406 580 6.0E-32 T 28-03-2018 APY29_RS07085 130884bcd9a0348ccb8048c367cfe75f 677 Pfam PF01433 Peptidase family M1 domain 413 576 1.6E-13 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APY29_RS07085 130884bcd9a0348ccb8048c367cfe75f 677 Gene3D G3DSA:2.60.40.1730 75 325 2.5E-21 T 28-03-2018 APY29_RS07085 130884bcd9a0348ccb8048c367cfe75f 677 SUPERFAMILY SSF55486 345 579 2.67E-37 T 28-03-2018 APY29_RS21050 f289958207aa19831118c83e06c4a0ed 276 Pfam PF01311 Bacterial export proteins, family 1 20 252 1.5E-48 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 APY29_RS21050 f289958207aa19831118c83e06c4a0ed 276 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 87 106 1.4E-25 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 APY29_RS21050 f289958207aa19831118c83e06c4a0ed 276 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 28 49 1.4E-25 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 APY29_RS21050 f289958207aa19831118c83e06c4a0ed 276 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 211 230 1.4E-25 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 APY29_RS21050 f289958207aa19831118c83e06c4a0ed 276 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 189 211 1.4E-25 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 APY29_RS21050 f289958207aa19831118c83e06c4a0ed 276 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 13 264 2.0E-81 T 28-03-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 APY29_RS20975 3d1f271518b0c96390796a3d0f782dde 649 SUPERFAMILY SSF51445 152 624 8.33E-117 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS20975 3d1f271518b0c96390796a3d0f782dde 649 Pfam PF02446 4-alpha-glucanotransferase 158 303 1.2E-13 T 28-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 APY29_RS20975 3d1f271518b0c96390796a3d0f782dde 649 Pfam PF02446 4-alpha-glucanotransferase 311 620 4.0E-70 T 28-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 APY29_RS20975 3d1f271518b0c96390796a3d0f782dde 649 Gene3D G3DSA:3.20.20.80 148 305 1.8E-25 T 28-03-2018 APY29_RS20975 3d1f271518b0c96390796a3d0f782dde 649 Gene3D G3DSA:3.20.20.80 306 640 2.8E-96 T 28-03-2018 APY29_RS18600 bdc1e6469e4b1254ef61778a8d691169 813 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 1 771 20.461 T 28-03-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 APY29_RS18600 bdc1e6469e4b1254ef61778a8d691169 813 Gene3D G3DSA:2.40.160.20 606 810 7.0E-4 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APY29_RS18600 bdc1e6469e4b1254ef61778a8d691169 813 Gene3D G3DSA:2.60.450.10 51 206 4.3E-16 T 28-03-2018 APY29_RS18600 bdc1e6469e4b1254ef61778a8d691169 813 Pfam PF03968 OstA-like protein 62 191 2.1E-7 T 28-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal APY29_RS18600 bdc1e6469e4b1254ef61778a8d691169 813 Pfam PF04453 Organic solvent tolerance protein 296 710 1.1E-99 T 28-03-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 APY29_RS02235 49aee8a45acbdd13bda3b6bbca3b78c3 380 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 28 373 2.7E-53 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 APY29_RS02235 49aee8a45acbdd13bda3b6bbca3b78c3 380 SUPERFAMILY SSF111369 39 289 2.22E-24 T 28-03-2018 APY29_RS02235 49aee8a45acbdd13bda3b6bbca3b78c3 380 Gene3D G3DSA:1.20.1600.10 18 284 4.1E-27 T 28-03-2018 APY29_RS02235 49aee8a45acbdd13bda3b6bbca3b78c3 380 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 284 1.2E-19 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APY29_RS19410 e33afbeaf9d8e7cbe95dc973448e7fab 342 Gene3D G3DSA:3.40.50.10490 195 342 2.6E-32 T 28-03-2018 APY29_RS19410 e33afbeaf9d8e7cbe95dc973448e7fab 342 Pfam PF01380 SIS domain 204 286 8.0E-15 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 APY29_RS19410 e33afbeaf9d8e7cbe95dc973448e7fab 342 Pfam PF01380 SIS domain 49 166 1.5E-17 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 APY29_RS19410 e33afbeaf9d8e7cbe95dc973448e7fab 342 Gene3D G3DSA:3.40.50.10490 6 194 1.7E-33 T 28-03-2018 APY29_RS19410 e33afbeaf9d8e7cbe95dc973448e7fab 342 SUPERFAMILY SSF53697 11 340 4.03E-76 T 28-03-2018 APY29_RS20415 18b46fa141b1b5f17d35e4517b76e35f 754 SUPERFAMILY SSF52833 651 750 3.73E-12 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS20415 18b46fa141b1b5f17d35e4517b76e35f 754 ProSitePatterns PS00194 Thioredoxin family active site. 662 680 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 APY29_RS20415 18b46fa141b1b5f17d35e4517b76e35f 754 SUPERFAMILY SSF90123 358 530 2.55E-5 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS20415 18b46fa141b1b5f17d35e4517b76e35f 754 SUPERFAMILY SSF74863 19 135 5.62E-35 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain APY29_RS20415 18b46fa141b1b5f17d35e4517b76e35f 754 Pfam PF13899 Thioredoxin-like 651 729 5.1E-13 T 28-03-2018 APY29_RS20415 18b46fa141b1b5f17d35e4517b76e35f 754 Gene3D G3DSA:2.60.40.1250 15 144 1.3E-40 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain APY29_RS20415 18b46fa141b1b5f17d35e4517b76e35f 754 Gene3D G3DSA:2.60.40.1250 175 306 2.5E-31 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain APY29_RS20415 18b46fa141b1b5f17d35e4517b76e35f 754 Gene3D G3DSA:3.40.30.10 629 754 3.6E-7 T 28-03-2018 APY29_RS20415 18b46fa141b1b5f17d35e4517b76e35f 754 Pfam PF11412 Disulphide bond corrector protein DsbC 181 296 6.2E-31 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain APY29_RS20415 18b46fa141b1b5f17d35e4517b76e35f 754 Pfam PF11412 Disulphide bond corrector protein DsbC 20 134 5.9E-35 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain APY29_RS20415 18b46fa141b1b5f17d35e4517b76e35f 754 SUPERFAMILY SSF74863 181 297 1.57E-30 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain APY29_RS20415 18b46fa141b1b5f17d35e4517b76e35f 754 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 365 543 4.6E-11 T 28-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 APY29_RS18595 2cfdde1cf6b055155b8508ca3984a1f6 51 Gene3D G3DSA:3.40.800.20 1 51 1.4E-12 T 28-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 APY29_RS18595 2cfdde1cf6b055155b8508ca3984a1f6 51 Pfam PF00850 Histone deacetylase domain 2 50 8.8E-8 T 28-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 APY29_RS18595 2cfdde1cf6b055155b8508ca3984a1f6 51 SUPERFAMILY SSF52768 2 50 1.44E-7 T 28-03-2018 APY29_RS12685 f9389f1709f98c9daf62ff22ba55ca0c 407 Pfam PF07559 Flagellar basal body protein FlaE 177 288 6.4E-23 T 28-03-2018 IPR011491 Flagellar hook protein FlgE APY29_RS12685 f9389f1709f98c9daf62ff22ba55ca0c 407 Pfam PF00460 Flagella basal body rod protein 3 33 1.9E-8 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 APY29_RS12685 f9389f1709f98c9daf62ff22ba55ca0c 407 SUPERFAMILY SSF117143 79 368 5.49E-75 T 28-03-2018 APY29_RS12685 f9389f1709f98c9daf62ff22ba55ca0c 407 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site APY29_RS12685 f9389f1709f98c9daf62ff22ba55ca0c 407 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 328 406 1.3E-19 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain APY29_RS12685 f9389f1709f98c9daf62ff22ba55ca0c 407 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 389 3.9E-107 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G APY29_RS12685 f9389f1709f98c9daf62ff22ba55ca0c 407 Gene3D G3DSA:2.60.98.20 151 289 1.2E-28 T 28-03-2018 IPR011491 Flagellar hook protein FlgE APY29_RS15445 6794adc8fdee6cd8d9f744c232397387 227 SUPERFAMILY SSF53056 16 226 3.14E-54 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APY29_RS15445 6794adc8fdee6cd8d9f744c232397387 227 Pfam PF00484 Carbonic anhydrase 73 222 4.3E-40 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APY29_RS15445 6794adc8fdee6cd8d9f744c232397387 227 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 77 84 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APY29_RS15445 6794adc8fdee6cd8d9f744c232397387 227 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 114 134 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APY29_RS15445 6794adc8fdee6cd8d9f744c232397387 227 SMART SM00947 65 226 9.3E-54 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APY29_RS15445 6794adc8fdee6cd8d9f744c232397387 227 Gene3D G3DSA:3.40.1050.10 20 227 1.8E-57 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APY29_RS00465 2871224bf0e9dda97b2b5addb9a5167b 871 Gene3D G3DSA:2.40.170.20 166 870 5.4E-56 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS00465 2871224bf0e9dda97b2b5addb9a5167b 871 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 40 870 6.1E-193 T 28-03-2018 IPR010104 Bacterial TonB-dependent receptor APY29_RS00465 2871224bf0e9dda97b2b5addb9a5167b 871 Pfam PF00593 TonB dependent receptor 370 870 7.2E-40 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS00465 2871224bf0e9dda97b2b5addb9a5167b 871 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 165 1.1E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS00465 2871224bf0e9dda97b2b5addb9a5167b 871 Gene3D G3DSA:2.170.130.10 34 165 7.1E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS00465 2871224bf0e9dda97b2b5addb9a5167b 871 SUPERFAMILY SSF56935 516 870 3.66E-75 T 28-03-2018 APY29_RS00465 2871224bf0e9dda97b2b5addb9a5167b 871 SUPERFAMILY SSF56935 276 474 3.66E-75 T 28-03-2018 APY29_RS00465 2871224bf0e9dda97b2b5addb9a5167b 871 SUPERFAMILY SSF56935 36 237 3.66E-75 T 28-03-2018 APY29_RS19450 0a24515f2c74537520a4b37e7e56dbea 236 Pfam PF01203 Type II secretion system (T2SS), protein N 34 220 2.9E-14 T 28-03-2018 IPR022792 Type II secretion system, protein N APY29_RS15775 2f70e57f947dd5d64b1247fe2527c10d 517 Pfam PF13372 Alginate export 120 508 2.2E-41 T 28-03-2018 IPR025388 Alginate export domain APY29_RS18260 5ac9d5ef0b906f455b729fc08cd3da05 565 Gene3D G3DSA:2.60.120.380 459 565 4.0E-9 T 28-03-2018 APY29_RS18260 5ac9d5ef0b906f455b729fc08cd3da05 565 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 482 550 2.7E-13 T 28-03-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial APY29_RS18260 5ac9d5ef0b906f455b729fc08cd3da05 565 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 400 410 - T 28-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site APY29_RS18260 5ac9d5ef0b906f455b729fc08cd3da05 565 SUPERFAMILY SSF52743 149 196 3.93E-75 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS18260 5ac9d5ef0b906f455b729fc08cd3da05 565 SUPERFAMILY SSF52743 223 464 3.93E-75 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS18260 5ac9d5ef0b906f455b729fc08cd3da05 565 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 230 240 - T 28-03-2018 IPR022398 Peptidase S8, subtilisin, His-active site APY29_RS18260 5ac9d5ef0b906f455b729fc08cd3da05 565 Pfam PF00082 Subtilase family 161 448 1.4E-51 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS18260 5ac9d5ef0b906f455b729fc08cd3da05 565 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 166 176 - T 28-03-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site APY29_RS18260 5ac9d5ef0b906f455b729fc08cd3da05 565 PRINTS PR00723 Subtilisin serine protease family (S8) signature 226 239 3.4E-18 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS18260 5ac9d5ef0b906f455b729fc08cd3da05 565 PRINTS PR00723 Subtilisin serine protease family (S8) signature 399 415 3.4E-18 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS18260 5ac9d5ef0b906f455b729fc08cd3da05 565 PRINTS PR00723 Subtilisin serine protease family (S8) signature 161 180 3.4E-18 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related APY29_RS18260 5ac9d5ef0b906f455b729fc08cd3da05 565 Gene3D G3DSA:3.40.50.200 102 458 2.4E-86 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS10785 cdbaf507e3dbbfa4b6fff5fad3bfc9f2 455 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 37 256 1.3E-52 T 28-03-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 APY29_RS10785 cdbaf507e3dbbfa4b6fff5fad3bfc9f2 455 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 1 306 2.5E-53 T 28-03-2018 IPR014150 Conjugal transfer, TrbL APY29_RS17745 b81023f6926b0f00ca26db6057257aea 344 SUPERFAMILY SSF110997 268 341 4.71E-16 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 APY29_RS17745 b81023f6926b0f00ca26db6057257aea 344 SUPERFAMILY SSF110997 104 165 1.12E-9 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 APY29_RS17745 b81023f6926b0f00ca26db6057257aea 344 Pfam PF05036 Sporulation related domain 102 179 9.7E-15 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 APY29_RS17745 b81023f6926b0f00ca26db6057257aea 344 Pfam PF05036 Sporulation related domain 269 341 6.7E-17 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 APY29_RS17745 b81023f6926b0f00ca26db6057257aea 344 Gene3D G3DSA:3.30.70.1070 104 180 1.2E-11 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 APY29_RS17745 b81023f6926b0f00ca26db6057257aea 344 Gene3D G3DSA:3.30.70.1070 269 343 3.0E-16 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 APY29_RS02565 83397b2487ca6d23f8dff21e2a1c6d68 102 Gene3D G3DSA:1.10.150.20 13 97 3.9E-20 T 28-03-2018 APY29_RS02565 83397b2487ca6d23f8dff21e2a1c6d68 102 Pfam PF11731 Pathogenicity locus 8 91 3.9E-31 T 28-03-2018 IPR021725 Pathogenicity locus APY29_RS10480 c20da96a5ab7ea765f727595f22d7244 250 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 48 228 9.1E-71 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10480 c20da96a5ab7ea765f727595f22d7244 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 103 123 3.3E-47 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10480 c20da96a5ab7ea765f727595f22d7244 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 65 85 3.3E-47 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10480 c20da96a5ab7ea765f727595f22d7244 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 207 231 3.3E-47 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10480 c20da96a5ab7ea765f727595f22d7244 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 159 185 3.3E-47 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10480 c20da96a5ab7ea765f727595f22d7244 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 124 144 3.3E-47 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10480 c20da96a5ab7ea765f727595f22d7244 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 48 65 3.3E-47 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10480 c20da96a5ab7ea765f727595f22d7244 250 Pfam PF01578 Cytochrome C assembly protein 36 187 5.2E-29 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APY29_RS00540 6498bfcadc6feab99ca508ba56f7b620 1288 SUPERFAMILY SSF49899 53 250 1.31E-14 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain APY29_RS00540 6498bfcadc6feab99ca508ba56f7b620 1288 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 81 241 2.3E-8 T 28-03-2018 APY29_RS00540 6498bfcadc6feab99ca508ba56f7b620 1288 Gene3D G3DSA:2.60.120.200 34 260 9.2E-13 T 28-03-2018 APY29_RS07190 5594a8b16ab4e1a02785c2a1d70aa83a 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 57 68 4.7E-12 T 28-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 APY29_RS07190 5594a8b16ab4e1a02785c2a1d70aa83a 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 102 116 4.7E-12 T 28-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 APY29_RS07190 5594a8b16ab4e1a02785c2a1d70aa83a 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 30 38 4.7E-12 T 28-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 APY29_RS07190 5594a8b16ab4e1a02785c2a1d70aa83a 313 SUPERFAMILY SSF53474 6 292 1.21E-58 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS07190 5594a8b16ab4e1a02785c2a1d70aa83a 313 PIRSF PIRSF005539 1 300 2.2E-152 T 28-03-2018 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 APY29_RS07190 5594a8b16ab4e1a02785c2a1d70aa83a 313 TIGRFAM TIGR01250 pro_imino_pep_2: proline-specific peptidase 3 291 1.2E-80 T 28-03-2018 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 APY29_RS07190 5594a8b16ab4e1a02785c2a1d70aa83a 313 Pfam PF00561 alpha/beta hydrolase fold 29 279 3.6E-25 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS07190 5594a8b16ab4e1a02785c2a1d70aa83a 313 Gene3D G3DSA:3.40.50.1820 4 296 2.4E-58 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS05110 7d7ff9b1544bc848d12d92567748ca44 271 SUPERFAMILY SSF51735 1 242 7.94E-48 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS05110 7d7ff9b1544bc848d12d92567748ca44 271 Gene3D G3DSA:3.40.50.720 1 271 1.0E-50 T 28-03-2018 APY29_RS05110 7d7ff9b1544bc848d12d92567748ca44 271 Pfam PF00106 short chain dehydrogenase 6 200 1.6E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS05110 7d7ff9b1544bc848d12d92567748ca44 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.0E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS05110 7d7ff9b1544bc848d12d92567748ca44 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.0E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS05110 7d7ff9b1544bc848d12d92567748ca44 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.0E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS05110 7d7ff9b1544bc848d12d92567748ca44 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.0E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APY29_RS08210 6aa5ba64cb7cc16468960c43764dfdf9 295 SUPERFAMILY SSF103481 51 151 7.32E-19 T 28-03-2018 APY29_RS08210 6aa5ba64cb7cc16468960c43764dfdf9 295 Pfam PF00892 EamA-like transporter family 161 290 6.8E-22 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 APY29_RS08210 6aa5ba64cb7cc16468960c43764dfdf9 295 Pfam PF00892 EamA-like transporter family 26 148 5.5E-21 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 APY29_RS08210 6aa5ba64cb7cc16468960c43764dfdf9 295 SUPERFAMILY SSF103481 195 293 1.7E-19 T 28-03-2018 APY29_RS16110 6d6c9019db140920e4eeea8ebdee8a14 334 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 1 331 44.734 T 28-03-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 APY29_RS16110 6d6c9019db140920e4eeea8ebdee8a14 334 SUPERFAMILY SSF51445 1 295 2.74E-76 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS16110 6d6c9019db140920e4eeea8ebdee8a14 334 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 233 250 - T 28-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 APY29_RS16110 6d6c9019db140920e4eeea8ebdee8a14 334 Gene3D G3DSA:3.20.20.300 1 301 4.5E-76 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS16110 6d6c9019db140920e4eeea8ebdee8a14 334 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 3 290 5.2E-78 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APY29_RS00635 89cfcbd1c8567fa6aea081d7cec5b461 126 Pfam PF01526 Tn3 transposase DDE domain 1 107 1.7E-29 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 APY29_RS15965 8053c375a11b77f9470524589fe6bd2f 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 2.6E-12 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain APY29_RS15965 8053c375a11b77f9470524589fe6bd2f 157 Gene3D G3DSA:3.10.50.40 1 156 1.2E-25 T 28-03-2018 APY29_RS15965 8053c375a11b77f9470524589fe6bd2f 157 SUPERFAMILY SSF54534 3 140 2.16E-36 T 28-03-2018 APY29_RS00305 db7049226c1fdf122e07f1673cdd4d01 422 Pfam PF04932 O-Antigen ligase 210 351 8.2E-14 T 28-03-2018 IPR007016 O-antigen ligase-related APY29_RS00790 8e54cc54ab8a7c67c20086bd976f5ac3 212 Pfam PF13460 NAD(P)H-binding 8 195 9.3E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS00790 8e54cc54ab8a7c67c20086bd976f5ac3 212 SUPERFAMILY SSF51735 2 209 6.63E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS00790 8e54cc54ab8a7c67c20086bd976f5ac3 212 Gene3D G3DSA:3.40.50.720 1 211 5.6E-26 T 28-03-2018 APY29_RS10420 ba2400043dc0a391dc1e105c8d60c4b1 383 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 11 366 3.2E-102 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APY29_RS10420 ba2400043dc0a391dc1e105c8d60c4b1 383 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 380 2.7E-127 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APY29_RS10420 ba2400043dc0a391dc1e105c8d60c4b1 383 PIRSF PIRSF000267 6 382 2.5E-115 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APY29_RS15385 8137920911d3cce3481ba6d6d46ba66b 852 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 61 222 7.1E-23 T 28-03-2018 IPR024618 Domain of unknown function DUF3857 APY29_RS15385 8137920911d3cce3481ba6d6d46ba66b 852 Pfam PF01841 Transglutaminase-like superfamily 270 350 1.9E-7 T 28-03-2018 IPR002931 Transglutaminase-like APY29_RS15385 8137920911d3cce3481ba6d6d46ba66b 852 SUPERFAMILY SSF54001 269 392 2.24E-11 T 28-03-2018 APY29_RS17020 ce998d0b4e6857bc5932549c8369d1f1 472 SUPERFAMILY SSF56672 1 228 4.67E-29 T 28-03-2018 APY29_RS17020 ce998d0b4e6857bc5932549c8369d1f1 472 Gene3D G3DSA:1.10.150.20 163 401 5.1E-4 T 28-03-2018 APY29_RS17020 ce998d0b4e6857bc5932549c8369d1f1 472 Pfam PF00817 impB/mucB/samB family 23 149 1.2E-6 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 APY29_RS15420 a630a8049c2f0c2faab2b705ae1fe7e6 142 Gene3D G3DSA:1.20.120.10 26 142 4.8E-8 T 28-03-2018 APY29_RS15420 a630a8049c2f0c2faab2b705ae1fe7e6 142 SUPERFAMILY SSF47175 31 142 8.54E-18 T 28-03-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 APY29_RS05690 f8e7c26a6a1ee9a64fee5b4b3ff8e731 447 Pfam PF03080 Neprosin 204 443 2.7E-44 T 28-03-2018 IPR004314 Neprosin APY29_RS09415 0c4bf3eae8d28bb4d7933789d3c0a1ee 785 Gene3D G3DSA:1.50.10.10 346 653 3.8E-11 T 28-03-2018 APY29_RS09415 0c4bf3eae8d28bb4d7933789d3c0a1ee 785 SUPERFAMILY SSF48208 275 646 1.84E-15 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 APY29_RS23470 37707ff8b0893174bcc0714fb84def29 991 Pfam PF01526 Tn3 transposase DDE domain 580 969 1.0E-140 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 APY29_RS23470 37707ff8b0893174bcc0714fb84def29 991 Pfam PF13700 Domain of unknown function (DUF4158) 5 172 2.4E-52 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 APY29_RS20505 ef2d644d069cfb80d9fea48d367b6b48 219 Pfam PF01066 CDP-alcohol phosphatidyltransferase 29 99 4.0E-6 T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APY29_RS00765 4624be309f4598fb565dc438d9c92f6a 109 Gene3D G3DSA:3.40.30.10 16 106 4.5E-16 T 28-03-2018 APY29_RS00765 4624be309f4598fb565dc438d9c92f6a 109 SUPERFAMILY SSF52833 18 103 3.53E-18 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS00765 4624be309f4598fb565dc438d9c92f6a 109 Pfam PF00085 Thioredoxin 15 103 1.0E-12 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 APY29_RS02475 3314673458ce27ab0b0a55890aa408ee 285 SUPERFAMILY SSF53335 7 284 3.82E-75 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS02475 3314673458ce27ab0b0a55890aa408ee 285 Pfam PF01564 Spermine/spermidine synthase domain 63 245 1.8E-52 T 28-03-2018 APY29_RS02475 3314673458ce27ab0b0a55890aa408ee 285 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 36.151 T 28-03-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 APY29_RS02475 3314673458ce27ab0b0a55890aa408ee 285 Pfam PF17284 Spermidine synthase tetramerisation domain 7 58 7.2E-10 T 28-03-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 APY29_RS02475 3314673458ce27ab0b0a55890aa408ee 285 Gene3D G3DSA:2.30.140.10 7 55 1.5E-13 T 28-03-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 APY29_RS02475 3314673458ce27ab0b0a55890aa408ee 285 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 2.4E-80 T 28-03-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 APY29_RS02475 3314673458ce27ab0b0a55890aa408ee 285 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 83 96 - T 28-03-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 APY29_RS02475 3314673458ce27ab0b0a55890aa408ee 285 Gene3D G3DSA:3.40.50.150 60 285 4.7E-34 T 28-03-2018 APY29_RS14335 528e8e21b513006174fc816d09a8ef25 371 Pfam PF12762 ISXO2-like transposase domain 138 315 1.6E-34 T 28-03-2018 IPR024445 ISXO2-like transposase domain APY29_RS14335 528e8e21b513006174fc816d09a8ef25 371 Gene3D G3DSA:3.90.820.10 42 88 7.5E-4 T 28-03-2018 APY29_RS14335 528e8e21b513006174fc816d09a8ef25 371 Pfam PF12760 Transposase zinc-ribbon domain 23 69 2.2E-8 T 28-03-2018 IPR024442 Transposase, zinc-ribbon APY29_RS14335 528e8e21b513006174fc816d09a8ef25 371 SMART SM01126 138 315 1.5E-55 T 28-03-2018 IPR024445 ISXO2-like transposase domain APY29_RS11860 50566c9f93fd4573e961760482932df2 118 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 19 112 23.994 T 28-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 APY29_RS11860 50566c9f93fd4573e961760482932df2 118 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 21 110 4.0E-27 T 28-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 APY29_RS11860 50566c9f93fd4573e961760482932df2 118 SUPERFAMILY SSF55248 21 113 1.7E-31 T 28-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 APY29_RS11860 50566c9f93fd4573e961760482932df2 118 Gene3D G3DSA:3.30.1360.20 15 115 2.7E-29 T 28-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 APY29_RS10175 04d7e4e7493437ad30ff911a7c7da31d 254 SUPERFAMILY SSF75217 6 167 5.43E-36 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases APY29_RS10175 04d7e4e7493437ad30ff911a7c7da31d 254 Pfam PF00588 SpoU rRNA Methylase family 7 157 2.3E-35 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APY29_RS10175 04d7e4e7493437ad30ff911a7c7da31d 254 PIRSF PIRSF004808 2 250 9.2E-70 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APY29_RS10175 04d7e4e7493437ad30ff911a7c7da31d 254 Gene3D G3DSA:3.40.1280.10 1 167 1.3E-42 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APY29_RS10175 04d7e4e7493437ad30ff911a7c7da31d 254 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 5 243 9.0E-66 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APY29_RS18680 425d605eb81340aa1eb71bb1b0373816 334 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 39 320 8.3E-94 T 28-03-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 APY29_RS18680 425d605eb81340aa1eb71bb1b0373816 334 Pfam PF09084 NMT1/THI5 like 64 256 3.0E-20 T 28-03-2018 IPR015168 SsuA/THI5-like APY29_RS18680 425d605eb81340aa1eb71bb1b0373816 334 Gene3D G3DSA:3.40.190.10 56 149 6.7E-7 T 28-03-2018 APY29_RS18680 425d605eb81340aa1eb71bb1b0373816 334 SUPERFAMILY SSF53850 36 269 3.44E-46 T 28-03-2018 APY29_RS18680 425d605eb81340aa1eb71bb1b0373816 334 Gene3D G3DSA:3.40.190.10 150 328 7.2E-28 T 28-03-2018 APY29_RS12950 788e4d71111f8c023a15c7635dbe7b23 294 Gene3D G3DSA:3.40.50.300 26 269 1.9E-53 T 28-03-2018 APY29_RS12950 788e4d71111f8c023a15c7635dbe7b23 294 SUPERFAMILY SSF52540 27 282 1.47E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS12950 788e4d71111f8c023a15c7635dbe7b23 294 PIRSF PIRSF003092 2 292 1.3E-81 T 28-03-2018 IPR025501 ATP binding protein MinD APY29_RS12950 788e4d71111f8c023a15c7635dbe7b23 294 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 29 247 2.5E-21 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain APY29_RS04670 30b37ec1f2b3a7582e45977961eb2271 426 Pfam PF01979 Amidohydrolase family 290 386 6.0E-10 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 APY29_RS04670 30b37ec1f2b3a7582e45977961eb2271 426 Gene3D G3DSA:3.30.43.10 204 286 0.001 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APY29_RS04670 30b37ec1f2b3a7582e45977961eb2271 426 SUPERFAMILY SSF51556 287 376 2.18E-5 T 28-03-2018 IPR032466 Metal-dependent hydrolase APY29_RS04670 30b37ec1f2b3a7582e45977961eb2271 426 Gene3D G3DSA:2.30.40.10 17 139 1.6E-13 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS04670 30b37ec1f2b3a7582e45977961eb2271 426 SUPERFAMILY SSF51338 366 400 5.32E-20 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS04670 30b37ec1f2b3a7582e45977961eb2271 426 SUPERFAMILY SSF51338 30 85 5.32E-20 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS04670 30b37ec1f2b3a7582e45977961eb2271 426 Gene3D G3DSA:2.30.40.10 311 400 3.1E-15 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APY29_RS18280 910e49ed5f4c5949ce23e890bf7d677b 184 Gene3D G3DSA:3.30.300.130 79 183 6.5E-23 T 28-03-2018 IPR034904 Fe-S cluster assembly domain APY29_RS18280 910e49ed5f4c5949ce23e890bf7d677b 184 Pfam PF01883 Iron-sulfur cluster assembly protein 86 160 1.8E-11 T 28-03-2018 IPR002744 MIP18 family-like APY29_RS18280 910e49ed5f4c5949ce23e890bf7d677b 184 SUPERFAMILY SSF117916 82 182 2.09E-26 T 28-03-2018 IPR034904 Fe-S cluster assembly domain APY29_RS18280 910e49ed5f4c5949ce23e890bf7d677b 184 TIGRFAM TIGR03406 FeS_long_SufT: probable FeS assembly SUF system protein SufT 9 183 5.1E-82 T 28-03-2018 IPR017776 FeS assembly SUF system protein SufT, putative APY29_RS14815 e106c105168075c2ca4f1d6efebf290f 168 Gene3D G3DSA:3.40.630.30 1 133 1.7E-20 T 28-03-2018 APY29_RS14815 e106c105168075c2ca4f1d6efebf290f 168 SUPERFAMILY SSF55729 3 157 3.72E-24 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS14815 e106c105168075c2ca4f1d6efebf290f 168 Pfam PF00583 Acetyltransferase (GNAT) family 41 128 5.4E-10 T 28-03-2018 IPR000182 GNAT domain GO:0008080 APY29_RS06285 d9c05fe4d5b7bd8bd25428cb95774652 803 Gene3D G3DSA:2.170.130.10 45 188 3.3E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS06285 d9c05fe4d5b7bd8bd25428cb95774652 803 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 176 2.7E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS06285 d9c05fe4d5b7bd8bd25428cb95774652 803 Gene3D G3DSA:2.40.170.20 189 802 6.3E-56 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS06285 d9c05fe4d5b7bd8bd25428cb95774652 803 Pfam PF00593 TonB dependent receptor 323 801 2.9E-35 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS06285 d9c05fe4d5b7bd8bd25428cb95774652 803 SUPERFAMILY SSF56935 404 802 7.85E-88 T 28-03-2018 APY29_RS06285 d9c05fe4d5b7bd8bd25428cb95774652 803 SUPERFAMILY SSF56935 45 361 7.85E-88 T 28-03-2018 APY29_RS20195 388d17bf8d767c28c0470088e7c93462 440 SUPERFAMILY SSF53474 37 183 2.5E-21 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS20195 388d17bf8d767c28c0470088e7c93462 440 Pfam PF01764 Lipase (class 3) 113 173 1.6E-6 T 28-03-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 APY29_RS20195 388d17bf8d767c28c0470088e7c93462 440 Gene3D G3DSA:3.40.50.1820 4 350 8.6E-24 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS12705 b93bd3584f43667c5f74b6235249cae6 261 SUPERFAMILY SSF117143 93 222 2.75E-34 T 28-03-2018 APY29_RS12705 b93bd3584f43667c5f74b6235249cae6 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 144 243 2.4E-31 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G APY29_RS12705 b93bd3584f43667c5f74b6235249cae6 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 1.3E-48 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G APY29_RS12705 b93bd3584f43667c5f74b6235249cae6 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 259 2.3E-24 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain APY29_RS12705 b93bd3584f43667c5f74b6235249cae6 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 5.1E-114 T 28-03-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 APY29_RS12705 b93bd3584f43667c5f74b6235249cae6 261 Pfam PF00460 Flagella basal body rod protein 5 35 8.4E-14 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 APY29_RS12705 b93bd3584f43667c5f74b6235249cae6 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site APY29_RS21025 86caec02b752579d5a2e930c4efeb384 113 SUPERFAMILY SSF69754 1 96 1.01E-9 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APY29_RS21025 86caec02b752579d5a2e930c4efeb384 113 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 7 101 5.5E-7 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APY29_RS21025 86caec02b752579d5a2e930c4efeb384 113 Gene3D G3DSA:3.30.160.100 1 107 1.0E-15 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APY29_RS14370 f187dde639841d6896b1cc2f3642649b 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 49 66 2.1E-51 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14370 f187dde639841d6896b1cc2f3642649b 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 208 232 2.1E-51 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14370 f187dde639841d6896b1cc2f3642649b 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 160 186 2.1E-51 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14370 f187dde639841d6896b1cc2f3642649b 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 66 86 2.1E-51 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14370 f187dde639841d6896b1cc2f3642649b 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 125 145 2.1E-51 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14370 f187dde639841d6896b1cc2f3642649b 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 104 124 2.1E-51 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS14370 f187dde639841d6896b1cc2f3642649b 252 Pfam PF01578 Cytochrome C assembly protein 46 188 9.6E-28 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APY29_RS14370 f187dde639841d6896b1cc2f3642649b 252 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 49 231 4.3E-74 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS13385 5079ef35027fcd128955fdfb1f5b3231 127 SUPERFAMILY SSF54593 2 126 4.3E-24 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS13385 5079ef35027fcd128955fdfb1f5b3231 127 Gene3D G3DSA:3.10.180.10 1 127 1.9E-22 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS13385 5079ef35027fcd128955fdfb1f5b3231 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 120 4.5E-11 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APY29_RS11495 05e6b9f9cc4800294aac0b6979a61563 182 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 78 182 4.1E-42 T 28-03-2018 IPR021300 Integrating conjugative element protein, PFL4695 APY29_RS11495 05e6b9f9cc4800294aac0b6979a61563 182 Gene3D G3DSA:3.20.20.60 30 179 1.9E-4 T 28-03-2018 APY29_RS11495 05e6b9f9cc4800294aac0b6979a61563 182 Pfam PF11072 Protein of unknown function (DUF2859) 34 180 4.2E-54 T 28-03-2018 IPR021300 Integrating conjugative element protein, PFL4695 APY29_RS00700 7456b327e6c116fcb6a6003ee9685a4c 531 SUPERFAMILY SSF111283 29 523 4.32E-90 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 APY29_RS00700 7456b327e6c116fcb6a6003ee9685a4c 531 Gene3D G3DSA:3.30.2290.10 25 271 1.0E-66 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain APY29_RS00700 7456b327e6c116fcb6a6003ee9685a4c 531 Pfam PF01523 Putative modulator of DNA gyrase 46 372 2.6E-57 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 APY29_RS20330 d0c38c640bcb034ffeadbcfe7a25a4b4 306 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 46 295 6.8E-44 T 28-03-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region APY29_RS20330 d0c38c640bcb034ffeadbcfe7a25a4b4 306 Gene3D G3DSA:2.120.10.30 4 305 5.0E-32 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS20330 d0c38c640bcb034ffeadbcfe7a25a4b4 306 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 176 198 6.6E-9 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) APY29_RS20330 d0c38c640bcb034ffeadbcfe7a25a4b4 306 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 47 64 6.6E-9 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) APY29_RS20330 d0c38c640bcb034ffeadbcfe7a25a4b4 306 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 240 257 6.6E-9 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) APY29_RS20330 d0c38c640bcb034ffeadbcfe7a25a4b4 306 SUPERFAMILY SSF63829 18 303 6.98E-48 T 28-03-2018 APY29_RS11505 16f46b63a84a84b909f0c3b4d563be15 240 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 46 237 8.5E-84 T 28-03-2018 IPR022293 Integrating conjugative element protein, PFL4693 APY29_RS11220 f615922f93db5693c6bafca7a2cc72c6 216 Pfam PF03466 LysR substrate binding domain 10 203 7.0E-18 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS11220 f615922f93db5693c6bafca7a2cc72c6 216 Gene3D G3DSA:3.40.190.10 90 178 3.7E-10 T 28-03-2018 APY29_RS11220 f615922f93db5693c6bafca7a2cc72c6 216 SUPERFAMILY SSF53850 9 207 3.39E-20 T 28-03-2018 APY29_RS11220 f615922f93db5693c6bafca7a2cc72c6 216 Gene3D G3DSA:3.40.190.10 7 89 3.4E-8 T 28-03-2018 APY29_RS14235 a283c0482d246a687c94046509ac6594 417 Pfam PF01943 Polysaccharide biosynthesis protein 4 275 3.8E-12 T 28-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 APY29_RS12745 3e4c80b3f8969323f37c850d8502bb9b 137 SUPERFAMILY SSF101116 11 127 2.62E-34 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 APY29_RS12745 3e4c80b3f8969323f37c850d8502bb9b 137 Pfam PF02561 Flagellar protein FliS 10 126 1.3E-34 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 APY29_RS12745 3e4c80b3f8969323f37c850d8502bb9b 137 Gene3D G3DSA:1.20.120.340 4 130 3.3E-40 T 28-03-2018 APY29_RS12745 3e4c80b3f8969323f37c850d8502bb9b 137 TIGRFAM TIGR00208 fliS: flagellar protein FliS 12 126 1.1E-25 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 APY29_RS12745 3e4c80b3f8969323f37c850d8502bb9b 137 PIRSF PIRSF039090 3 137 2.6E-47 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 APY29_RS02260 37a2d11df2d7ebf38e14b8b643e97266 363 SUPERFAMILY SSF56634 32 344 7.2E-88 T 28-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS02260 37a2d11df2d7ebf38e14b8b643e97266 363 Pfam PF00199 Catalase 64 341 8.3E-24 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS02260 37a2d11df2d7ebf38e14b8b643e97266 363 PIRSF PIRSF000296 15 348 9.3E-112 T 28-03-2018 IPR024168 Catalase, SrpA-type, predicted APY29_RS02260 37a2d11df2d7ebf38e14b8b643e97266 363 SMART SM01060 23 363 5.0E-6 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS02260 37a2d11df2d7ebf38e14b8b643e97266 363 Gene3D G3DSA:2.40.180.10 31 352 2.3E-66 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 APY29_RS21715 6759c9595bd3adcd87fcb5e0b58a40c9 157 Pfam PF07308 Protein of unknown function (DUF1456) 88 154 2.0E-24 T 28-03-2018 IPR009921 Domain of unknown function DUF1456 APY29_RS21715 6759c9595bd3adcd87fcb5e0b58a40c9 157 Pfam PF07308 Protein of unknown function (DUF1456) 3 72 1.4E-24 T 28-03-2018 IPR009921 Domain of unknown function DUF1456 APY29_RS21415 0b5e0eae0f75012479a4b01db97cb076 151 Pfam PF14085 Domain of unknown function (DUF4265) 23 140 3.5E-32 T 28-03-2018 IPR025361 Protein of unknown function DUF4265 APY29_RS08610 0f60690d3825ad391745aee1ee8d0a63 280 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 8 280 46.57 T 28-03-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 APY29_RS08610 0f60690d3825ad391745aee1ee8d0a63 280 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 47 278 1.1E-59 T 28-03-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 APY29_RS08610 0f60690d3825ad391745aee1ee8d0a63 280 Pfam PF02666 Phosphatidylserine decarboxylase 61 277 1.7E-54 T 28-03-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 APY29_RS12840 a6524833f304705e261673118816983a 1174 Gene3D G3DSA:3.90.550.10 307 519 0.023 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS12840 a6524833f304705e261673118816983a 1174 SUPERFAMILY SSF53756 890 1155 3.06E-10 T 28-03-2018 APY29_RS12840 a6524833f304705e261673118816983a 1174 Gene3D G3DSA:3.90.550.10 2 258 9.6E-28 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS12840 a6524833f304705e261673118816983a 1174 Gene3D G3DSA:3.90.550.10 532 813 1.6E-26 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS12840 a6524833f304705e261673118816983a 1174 SUPERFAMILY SSF53448 5 229 5.06E-35 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS12840 a6524833f304705e261673118816983a 1174 Pfam PF00535 Glycosyl transferase family 2 577 743 6.6E-12 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 APY29_RS12840 a6524833f304705e261673118816983a 1174 Pfam PF00535 Glycosyl transferase family 2 7 127 2.6E-17 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 APY29_RS12840 a6524833f304705e261673118816983a 1174 SUPERFAMILY SSF53448 555 796 4.85E-29 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS12840 a6524833f304705e261673118816983a 1174 Gene3D G3DSA:3.40.50.2000 995 1155 1.5E-10 T 28-03-2018 APY29_RS18350 405f5117501c4534af7e289ef10705c8 219 Gene3D G3DSA:3.90.79.10 36 215 5.5E-21 T 28-03-2018 APY29_RS18350 405f5117501c4534af7e289ef10705c8 219 Pfam PF00293 NUDIX domain 73 139 2.2E-7 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 APY29_RS18350 405f5117501c4534af7e289ef10705c8 219 SUPERFAMILY SSF55811 41 208 1.23E-27 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 APY29_RS08980 b02394c63ddda722dbb605e6b59c32cc 255 Pfam PF03524 Conjugal transfer protein 29 251 3.6E-52 T 28-03-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX APY29_RS09910 72c60f393b9b8c3fae11e5caf573d699 146 Gene3D G3DSA:2.30.30.220 12 109 8.0E-37 T 28-03-2018 IPR007481 Stringent starvation protein B APY29_RS09910 72c60f393b9b8c3fae11e5caf573d699 146 PIRSF PIRSF005276 5 146 5.2E-54 T 28-03-2018 IPR007481 Stringent starvation protein B APY29_RS09910 72c60f393b9b8c3fae11e5caf573d699 146 Pfam PF04386 Stringent starvation protein B 11 146 1.1E-33 T 28-03-2018 IPR007481 Stringent starvation protein B APY29_RS09910 72c60f393b9b8c3fae11e5caf573d699 146 SUPERFAMILY SSF101738 6 118 5.1E-45 T 28-03-2018 IPR007481 Stringent starvation protein B APY29_RS19920 62c31681fb2499e81b9c2c523fca839a 317 SMART SM00267 125 295 5.4E-42 T 28-03-2018 IPR000160 GGDEF domain APY29_RS19920 62c31681fb2499e81b9c2c523fca839a 317 Pfam PF00990 Diguanylate cyclase, GGDEF domain 136 291 2.2E-36 T 28-03-2018 IPR000160 GGDEF domain APY29_RS19920 62c31681fb2499e81b9c2c523fca839a 317 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 135 294 7.8E-40 T 28-03-2018 IPR000160 GGDEF domain APY29_RS19920 62c31681fb2499e81b9c2c523fca839a 317 SUPERFAMILY SSF55073 141 295 6.43E-41 T 28-03-2018 IPR029787 Nucleotide cyclase APY29_RS19920 62c31681fb2499e81b9c2c523fca839a 317 Gene3D G3DSA:3.30.70.270 129 301 3.8E-50 T 28-03-2018 APY29_RS02495 36dec05486c11e5781032b33a3325529 369 Pfam PF01757 Acyltransferase family 4 345 4.3E-25 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 APY29_RS14190 56ca157e07116bbe197a30c83c0b0264 373 Gene3D G3DSA:3.40.50.2000 190 347 8.5E-32 T 28-03-2018 APY29_RS14190 56ca157e07116bbe197a30c83c0b0264 373 Gene3D G3DSA:3.40.50.2000 4 189 3.6E-8 T 28-03-2018 APY29_RS14190 56ca157e07116bbe197a30c83c0b0264 373 SUPERFAMILY SSF53756 22 363 4.87E-56 T 28-03-2018 APY29_RS14190 56ca157e07116bbe197a30c83c0b0264 373 Pfam PF00534 Glycosyl transferases group 1 191 340 1.3E-23 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 APY29_RS14190 56ca157e07116bbe197a30c83c0b0264 373 Pfam PF13579 Glycosyl transferase 4-like domain 23 168 8.0E-10 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 APY29_RS10710 143ee9967a7c7316182e48ac6505b96e 339 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 2 184 6.8E-30 T 28-03-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Pfam PF03377 TAL effector repeat 629 660 3.9E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Pfam PF03377 TAL effector repeat 595 626 2.3E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Pfam PF03377 TAL effector repeat 425 456 2.3E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Pfam PF03377 TAL effector repeat 698 723 0.035 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Pfam PF03377 TAL effector repeat 357 388 3.6E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Pfam PF03377 TAL effector repeat 323 354 6.5E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Pfam PF03377 TAL effector repeat 527 558 1.2E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Pfam PF03377 TAL effector repeat 493 524 2.3E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Pfam PF03377 TAL effector repeat 459 490 2.3E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Pfam PF03377 TAL effector repeat 663 692 2.5E-12 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Pfam PF03377 TAL effector repeat 289 320 2.8E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Pfam PF03377 TAL effector repeat 561 592 2.3E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Pfam PF03377 TAL effector repeat 391 422 2.3E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Gene3D G3DSA:3.10.20.90 580 613 0.018 T 28-03-2018 APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Gene3D G3DSA:3.10.20.90 546 579 0.019 T 28-03-2018 APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Gene3D G3DSA:3.10.20.90 409 443 0.019 T 28-03-2018 APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Gene3D G3DSA:3.10.20.90 614 646 0.17 T 28-03-2018 APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Gene3D G3DSA:3.10.20.90 512 545 0.069 T 28-03-2018 APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Gene3D G3DSA:3.10.20.90 304 340 0.073 T 28-03-2018 APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Gene3D G3DSA:3.10.20.90 478 511 0.022 T 28-03-2018 APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Gene3D G3DSA:3.10.20.90 375 408 0.019 T 28-03-2018 APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Gene3D G3DSA:3.10.20.90 341 374 0.31 T 28-03-2018 APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Gene3D G3DSA:3.10.20.90 444 477 0.02 T 28-03-2018 APY29_RS12165 35bb24490cf9c15de67cc700fda62fbe 960 Gene3D G3DSA:1.20.120.660 647 754 0.047 T 28-03-2018 APY29_RS17425 9dbf36c967fb708b98b7dbbad953c9aa 191 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 184 1.1E-47 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 APY29_RS17425 9dbf36c967fb708b98b7dbbad953c9aa 191 SUPERFAMILY SSF52972 1 185 6.54E-53 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like APY29_RS17425 9dbf36c967fb708b98b7dbbad953c9aa 191 Pfam PF02545 Maf-like protein 4 185 1.3E-40 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 APY29_RS17425 9dbf36c967fb708b98b7dbbad953c9aa 191 Gene3D G3DSA:3.90.950.10 1 190 7.4E-53 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like APY29_RS17425 9dbf36c967fb708b98b7dbbad953c9aa 191 PIRSF PIRSF006305 1 190 2.9E-41 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 APY29_RS17425 9dbf36c967fb708b98b7dbbad953c9aa 191 Hamap MF_00528 Septum formation protein Maf [maf]. 4 190 27.787 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 APY29_RS01685 1e89a40fb0f4e1216e25cfb70cb3b3df 540 SUPERFAMILY SSF51905 307 391 5.99E-32 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS01685 1e89a40fb0f4e1216e25cfb70cb3b3df 540 SUPERFAMILY SSF51905 5 191 5.99E-32 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS01685 1e89a40fb0f4e1216e25cfb70cb3b3df 540 Pfam PF01494 FAD binding domain 6 206 3.8E-10 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 APY29_RS01685 1e89a40fb0f4e1216e25cfb70cb3b3df 540 Gene3D G3DSA:3.50.50.60 4 510 1.5E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS19735 be05407cb8546d6f0b742c98b9433935 251 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 150 240 1.1E-9 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS19735 be05407cb8546d6f0b742c98b9433935 251 SUPERFAMILY SSF46626 143 246 1.11E-17 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS19735 be05407cb8546d6f0b742c98b9433935 251 SUPERFAMILY SSF46626 59 69 1.11E-17 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS19735 be05407cb8546d6f0b742c98b9433935 251 Gene3D G3DSA:1.10.760.10 92 251 2.4E-19 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS08945 a543c866c23f7e4aeb45e5b36244aed0 180 SUPERFAMILY SSF54523 15 153 7.14E-17 T 28-03-2018 APY29_RS08945 a543c866c23f7e4aeb45e5b36244aed0 180 Pfam PF12019 Type II transport protein GspH 51 164 1.3E-19 T 28-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 APY29_RS08945 a543c866c23f7e4aeb45e5b36244aed0 180 Gene3D G3DSA:3.30.700.10 13 177 1.4E-11 T 28-03-2018 APY29_RS17890 dfc684539032014bc29b5cb272cc5055 156 Pfam PF09900 Predicted membrane protein (DUF2127) 15 149 2.5E-36 T 28-03-2018 IPR021125 Protein of unknown function DUF2127 APY29_RS06900 8101592cadceb6061e66d8ccae0b088f 142 Pfam PF00571 CBS domain 13 60 9.9E-8 T 28-03-2018 IPR000644 CBS domain APY29_RS06900 8101592cadceb6061e66d8ccae0b088f 142 Pfam PF00571 CBS domain 72 125 2.4E-15 T 28-03-2018 IPR000644 CBS domain APY29_RS06900 8101592cadceb6061e66d8ccae0b088f 142 SMART SM00116 79 126 2.7E-13 T 28-03-2018 IPR000644 CBS domain APY29_RS06900 8101592cadceb6061e66d8ccae0b088f 142 SMART SM00116 14 61 2.8E-4 T 28-03-2018 IPR000644 CBS domain APY29_RS06900 8101592cadceb6061e66d8ccae0b088f 142 SUPERFAMILY SSF54631 3 140 6.06E-34 T 28-03-2018 APY29_RS06900 8101592cadceb6061e66d8ccae0b088f 142 Gene3D G3DSA:3.10.580.10 2 139 1.7E-31 T 28-03-2018 APY29_RS17415 1ccf508286e74c04855e5e5df718cde8 64 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 1.1E-19 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS17415 1ccf508286e74c04855e5e5df718cde8 64 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.784 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS17415 1ccf508286e74c04855e5e5df718cde8 64 Pfam PF01783 Ribosomal L32p protein family 2 55 1.1E-20 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS17415 1ccf508286e74c04855e5e5df718cde8 64 SUPERFAMILY SSF57829 2 54 4.7E-18 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 APY29_RS20645 4c13565108369224d415b4882823ece3 69 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 50 5.3E-13 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain APY29_RS05890 73204df6f31ae29a717198721de0a2aa 1532 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 863 903 2.9E-8 T 28-03-2018 IPR006530 YD repeat APY29_RS05890 73204df6f31ae29a717198721de0a2aa 1532 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 842 883 1.1E-7 T 28-03-2018 IPR006530 YD repeat APY29_RS05890 73204df6f31ae29a717198721de0a2aa 1532 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 717 749 9.3E-8 T 28-03-2018 IPR006530 YD repeat APY29_RS05890 73204df6f31ae29a717198721de0a2aa 1532 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 658 687 1.3E-4 T 28-03-2018 IPR006530 YD repeat APY29_RS05890 73204df6f31ae29a717198721de0a2aa 1532 Pfam PF05593 RHS Repeat 884 919 4.4E-8 T 28-03-2018 IPR031325 RHS repeat APY29_RS05890 73204df6f31ae29a717198721de0a2aa 1532 Pfam PF05593 RHS Repeat 776 809 1.3E-4 T 28-03-2018 IPR031325 RHS repeat APY29_RS05890 73204df6f31ae29a717198721de0a2aa 1532 Pfam PF05593 RHS Repeat 1075 1111 9.3E-7 T 28-03-2018 IPR031325 RHS repeat APY29_RS05890 73204df6f31ae29a717198721de0a2aa 1532 Pfam PF05593 RHS Repeat 818 856 4.2E-5 T 28-03-2018 IPR031325 RHS repeat APY29_RS05890 73204df6f31ae29a717198721de0a2aa 1532 Pfam PF05593 RHS Repeat 301 338 1.1E-5 T 28-03-2018 IPR031325 RHS repeat APY29_RS05890 73204df6f31ae29a717198721de0a2aa 1532 Pfam PF05593 RHS Repeat 863 900 3.4E-7 T 28-03-2018 IPR031325 RHS repeat APY29_RS05890 73204df6f31ae29a717198721de0a2aa 1532 Pfam PF05593 RHS Repeat 842 878 7.5E-8 T 28-03-2018 IPR031325 RHS repeat APY29_RS05890 73204df6f31ae29a717198721de0a2aa 1532 Pfam PF05593 RHS Repeat 658 687 3.9E-7 T 28-03-2018 IPR031325 RHS repeat APY29_RS05890 73204df6f31ae29a717198721de0a2aa 1532 Pfam PF05593 RHS Repeat 729 760 1.4E-5 T 28-03-2018 IPR031325 RHS repeat APY29_RS05890 73204df6f31ae29a717198721de0a2aa 1532 Pfam PF05593 RHS Repeat 708 745 2.6E-7 T 28-03-2018 IPR031325 RHS repeat APY29_RS05890 73204df6f31ae29a717198721de0a2aa 1532 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1286 1366 1.4E-16 T 28-03-2018 IPR022385 Rhs repeat-associated core GO:0097264 APY29_RS21380 ac65d2f1092921d781666aa869051852 436 Pfam PF07690 Major Facilitator Superfamily 28 369 8.6E-29 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS21380 ac65d2f1092921d781666aa869051852 436 ProSitePatterns PS00216 Sugar transport proteins signature 1. 77 92 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APY29_RS21380 ac65d2f1092921d781666aa869051852 436 Gene3D G3DSA:1.20.1250.20 235 436 4.2E-18 T 28-03-2018 APY29_RS21380 ac65d2f1092921d781666aa869051852 436 Gene3D G3DSA:1.20.1250.20 11 209 2.7E-32 T 28-03-2018 APY29_RS21380 ac65d2f1092921d781666aa869051852 436 SUPERFAMILY SSF103473 15 431 5.49E-65 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS02510 252c9a189f0fc1d4f9253159a2def862 293 Pfam PF05036 Sporulation related domain 217 291 9.5E-15 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 APY29_RS02510 252c9a189f0fc1d4f9253159a2def862 293 SUPERFAMILY SSF110997 216 291 2.09E-15 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 APY29_RS02510 252c9a189f0fc1d4f9253159a2def862 293 Gene3D G3DSA:3.30.70.1070 213 293 5.8E-15 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 APY29_RS00885 74c9dce77fded040bd4a5e79d94d2185 99 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 12 92 3.0E-17 T 28-03-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB APY29_RS23200 5ca03c5a166dab3924a91543f850d032 351 Pfam PF04333 MlaA lipoprotein 120 311 4.8E-71 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 APY29_RS23200 5ca03c5a166dab3924a91543f850d032 351 PRINTS PR01805 VacJ lipoprotein signature 121 134 1.5E-22 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 APY29_RS23200 5ca03c5a166dab3924a91543f850d032 351 PRINTS PR01805 VacJ lipoprotein signature 189 206 1.5E-22 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 APY29_RS23200 5ca03c5a166dab3924a91543f850d032 351 PRINTS PR01805 VacJ lipoprotein signature 138 154 1.5E-22 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 APY29_RS23200 5ca03c5a166dab3924a91543f850d032 351 PRINTS PR01805 VacJ lipoprotein signature 225 242 1.5E-22 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 APY29_RS05900 a2a894436207f815bc1dfb685139c787 287 Pfam PF01478 Type IV leader peptidase family 133 241 1.0E-23 T 28-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 APY29_RS05900 a2a894436207f815bc1dfb685139c787 287 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 18 123 1.6E-26 T 28-03-2018 IPR010627 Peptidase A24A, N-terminal APY29_RS05900 a2a894436207f815bc1dfb685139c787 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 210 221 4.1E-21 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial APY29_RS05900 a2a894436207f815bc1dfb685139c787 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 222 237 4.1E-21 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial APY29_RS05900 a2a894436207f815bc1dfb685139c787 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 199 209 4.1E-21 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial APY29_RS05900 a2a894436207f815bc1dfb685139c787 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 142 159 4.1E-21 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial APY29_RS05375 2079d1d1e6f6d581a25fb495a5881b4d 153 Pfam PF14316 Domain of unknown function (DUF4381) 7 138 1.4E-33 T 28-03-2018 IPR025489 Protein of unknown function (DUF4381 APY29_RS22575 323f881a5c0703af72cf56d4861efd3a 301 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 300 40.281 T 28-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 APY29_RS22575 323f881a5c0703af72cf56d4861efd3a 301 Pfam PF04381 Putative exonuclease, RdgC 1 296 1.1E-98 T 28-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 APY29_RS18775 28ce76c5088d8d647d9bef9749d44ad6 305 Gene3D G3DSA:3.60.130.10 21 305 4.8E-73 T 28-03-2018 APY29_RS18775 28ce76c5088d8d647d9bef9749d44ad6 305 SUPERFAMILY SSF51197 26 305 4.08E-88 T 28-03-2018 APY29_RS18775 28ce76c5088d8d647d9bef9749d44ad6 305 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 32 298 8.7E-67 T 28-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 APY29_RS10265 cdada3b8bcfb9e5373b319ae3aef0d58 293 SUPERFAMILY SSF56281 28 268 9.88E-29 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS10265 cdada3b8bcfb9e5373b319ae3aef0d58 293 Gene3D G3DSA:3.60.15.10 1 272 1.2E-30 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS10265 cdada3b8bcfb9e5373b319ae3aef0d58 293 Pfam PF00753 Metallo-beta-lactamase superfamily 34 232 2.9E-18 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS10265 cdada3b8bcfb9e5373b319ae3aef0d58 293 SMART SM00849 33 266 2.8E-13 T 28-03-2018 IPR001279 Metallo-beta-lactamase APY29_RS16740 e99e2e7149b7dedf01212d7b8809d5d6 301 SUPERFAMILY SSF54637 120 287 2.7E-55 T 28-03-2018 IPR029069 HotDog domain APY29_RS16740 e99e2e7149b7dedf01212d7b8809d5d6 301 Gene3D G3DSA:3.10.129.10 137 290 3.8E-53 T 28-03-2018 APY29_RS16740 e99e2e7149b7dedf01212d7b8809d5d6 301 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 16 287 2.8E-89 T 28-03-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247 APY29_RS16740 e99e2e7149b7dedf01212d7b8809d5d6 301 Pfam PF13622 Thioesterase-like superfamily 31 286 1.4E-60 T 28-03-2018 APY29_RS16740 e99e2e7149b7dedf01212d7b8809d5d6 301 Gene3D G3DSA:3.10.129.10 6 120 1.9E-40 T 28-03-2018 APY29_RS16740 e99e2e7149b7dedf01212d7b8809d5d6 301 SUPERFAMILY SSF54637 8 118 2.09E-38 T 28-03-2018 IPR029069 HotDog domain APY29_RS16475 11b08c477792bf562364604ff251081f 280 Gene3D G3DSA:3.30.750.24 154 275 3.4E-13 T 28-03-2018 IPR002645 STAS domain APY29_RS16475 11b08c477792bf562364604ff251081f 280 Pfam PF14361 RsbT co-antagonist protein rsbRD N-terminal domain 13 105 5.4E-21 T 28-03-2018 IPR025751 RsbT co-antagonist protein RsbRD, N-terminal domain APY29_RS16475 11b08c477792bf562364604ff251081f 280 SUPERFAMILY SSF52091 158 268 1.47E-17 T 28-03-2018 IPR002645 STAS domain APY29_RS16475 11b08c477792bf562364604ff251081f 280 Pfam PF01740 STAS domain 165 251 6.4E-8 T 28-03-2018 IPR002645 STAS domain APY29_RS22630 4be3a31146ed3d8f13678348fea5ab5f 129 PRINTS PR00311 Bleomycin resistance protein signature 10 27 4.7E-7 T 28-03-2018 IPR000335 Bleomycin resistance protein GO:0008144|GO:0046677 APY29_RS22630 4be3a31146ed3d8f13678348fea5ab5f 129 PRINTS PR00311 Bleomycin resistance protein signature 42 53 4.7E-7 T 28-03-2018 IPR000335 Bleomycin resistance protein GO:0008144|GO:0046677 APY29_RS22630 4be3a31146ed3d8f13678348fea5ab5f 129 Gene3D G3DSA:3.10.180.10 12 127 7.6E-19 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS22630 4be3a31146ed3d8f13678348fea5ab5f 129 SUPERFAMILY SSF54593 12 124 9.16E-23 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS12860 81b9df5728cb09cbab4a726ff4567108 206 Pfam PF02108 Flagellar assembly protein FliH 73 193 2.3E-20 T 28-03-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE APY29_RS16595 36c5feb24bfa1e99cab5577e91399d5f 150 Pfam PF06412 Conjugal transfer protein TraD 74 133 1.6E-10 T 28-03-2018 IPR009444 Conjugal transfer, TraD, alpha-type GO:0000746 APY29_RS08550 c27fb269d00bf096e8efc2d74e273de8 77 Gene3D G3DSA:2.10.260.10 1 40 4.8E-13 T 28-03-2018 APY29_RS08550 c27fb269d00bf096e8efc2d74e273de8 77 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 5 45 7.0E-13 T 28-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 APY29_RS08550 c27fb269d00bf096e8efc2d74e273de8 77 SMART SM00966 4 50 3.3E-9 T 28-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 APY29_RS08550 c27fb269d00bf096e8efc2d74e273de8 77 SUPERFAMILY SSF89447 1 56 8.37E-13 T 28-03-2018 APY29_RS20190 ffed07aef6baae8ac4ded52b72563b4e 333 SUPERFAMILY SSF51445 29 331 2.52E-76 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS20190 ffed07aef6baae8ac4ded52b72563b4e 333 Pfam PF07745 Glycosyl hydrolase family 53 31 333 9.6E-100 T 28-03-2018 IPR011683 Glycosyl hydrolase family 53 GO:0015926 APY29_RS20190 ffed07aef6baae8ac4ded52b72563b4e 333 Gene3D G3DSA:3.20.20.80 27 333 7.4E-58 T 28-03-2018 APY29_RS19235 4d1927a32cc0c1b6bb12e47e51d500cd 369 PIRSF PIRSF006769 7 367 1.4E-123 T 28-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 APY29_RS19235 4d1927a32cc0c1b6bb12e47e51d500cd 369 SUPERFAMILY SSF53927 12 153 3.01E-47 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 APY29_RS19235 4d1927a32cc0c1b6bb12e47e51d500cd 369 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 155 363 1.0E-54 T 28-03-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 APY29_RS19235 4d1927a32cc0c1b6bb12e47e51d500cd 369 Gene3D G3DSA:3.40.140.10 7 133 1.2E-32 T 28-03-2018 APY29_RS19235 4d1927a32cc0c1b6bb12e47e51d500cd 369 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 16 360 2.7E-113 T 28-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 APY29_RS19235 4d1927a32cc0c1b6bb12e47e51d500cd 369 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 11 108 1.8E-18 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain APY29_RS19235 4d1927a32cc0c1b6bb12e47e51d500cd 369 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 97 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APY29_RS19235 4d1927a32cc0c1b6bb12e47e51d500cd 369 Gene3D G3DSA:3.40.430.10 134 366 1.1E-69 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 APY29_RS19235 4d1927a32cc0c1b6bb12e47e51d500cd 369 Pfam PF01872 RibD C-terminal domain 156 359 4.1E-47 T 28-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 APY29_RS19235 4d1927a32cc0c1b6bb12e47e51d500cd 369 SUPERFAMILY SSF53597 154 362 9.45E-58 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 APY29_RS16745 f0bc6eee05fb4e7e9e8f8620efaf28f4 170 Pfam PF09413 Putative prokaryotic signal transducing protein 1 75 2.2E-6 T 28-03-2018 IPR018551 Domain of unknown function DUF2007 APY29_RS16745 f0bc6eee05fb4e7e9e8f8620efaf28f4 170 Gene3D G3DSA:3.30.70.790 1 82 6.2E-16 T 28-03-2018 APY29_RS18525 571e8ff39adc3466d6b3718de473e287 333 Pfam PF03466 LysR substrate binding domain 103 306 2.5E-30 T 28-03-2018 IPR005119 LysR, substrate-binding APY29_RS18525 571e8ff39adc3466d6b3718de473e287 333 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 6.1E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS18525 571e8ff39adc3466d6b3718de473e287 333 Gene3D G3DSA:3.40.190.10 100 188 1.6E-17 T 28-03-2018 APY29_RS18525 571e8ff39adc3466d6b3718de473e287 333 Gene3D G3DSA:3.40.190.10 189 280 1.7E-13 T 28-03-2018 APY29_RS18525 571e8ff39adc3466d6b3718de473e287 333 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 1.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS18525 571e8ff39adc3466d6b3718de473e287 333 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 1.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS18525 571e8ff39adc3466d6b3718de473e287 333 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 1.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APY29_RS18525 571e8ff39adc3466d6b3718de473e287 333 SUPERFAMILY SSF53850 103 308 4.35E-30 T 28-03-2018 APY29_RS18525 571e8ff39adc3466d6b3718de473e287 333 Gene3D G3DSA:1.10.10.10 7 94 7.5E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS18525 571e8ff39adc3466d6b3718de473e287 333 SUPERFAMILY SSF46785 10 121 5.01E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS07125 9421ec13e429d677f7fa5bbab39d9859 350 SMART SM00558 126 285 3.0E-5 T 28-03-2018 IPR003347 JmjC domain APY29_RS07125 9421ec13e429d677f7fa5bbab39d9859 350 Gene3D G3DSA:2.60.120.650 34 275 1.2E-37 T 28-03-2018 APY29_RS07125 9421ec13e429d677f7fa5bbab39d9859 350 SUPERFAMILY SSF51197 39 339 2.06E-55 T 28-03-2018 APY29_RS07125 9421ec13e429d677f7fa5bbab39d9859 350 Pfam PF13621 Cupin-like domain 38 273 3.4E-57 T 28-03-2018 APY29_RS18720 5efe4e562de41c17a76bd92aed0c214e 296 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 139 151 - T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 APY29_RS18720 5efe4e562de41c17a76bd92aed0c214e 296 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 280 19.641 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 APY29_RS18720 5efe4e562de41c17a76bd92aed0c214e 296 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 274 1.0E-75 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 APY29_RS18720 5efe4e562de41c17a76bd92aed0c214e 296 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 6 277 5.6E-75 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 APY29_RS01845 afd4f5757d4cb06838c7f57b043d0fa1 116 Pfam PF11287 Protein of unknown function (DUF3088) 7 112 7.9E-28 T 28-03-2018 IPR021439 Protein of unknown function DUF3088 APY29_RS02540 b1ac6c82e95a1197dd96f1d55af452f9 195 SUPERFAMILY SSF143422 34 129 6.28E-5 T 28-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 APY29_RS02540 b1ac6c82e95a1197dd96f1d55af452f9 195 Gene3D G3DSA:3.30.70.1290 31 144 2.1E-7 T 28-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 APY29_RS05520 62a7fb26f7e9c42899bc5dac1d61d449 451 Pfam PF13163 Protein of unknown function (DUF3999) 23 441 1.0E-109 T 28-03-2018 IPR025060 Protein of unknown function DUF3999 APY29_RS09205 91fd7abbbc211ca6118850e6a9834e78 153 Gene3D G3DSA:2.60.120.10 1 149 2.4E-48 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS09205 91fd7abbbc211ca6118850e6a9834e78 153 SUPERFAMILY SSF51182 2 142 9.52E-47 T 28-03-2018 IPR011051 RmlC-like cupin domain APY29_RS09205 91fd7abbbc211ca6118850e6a9834e78 153 Pfam PF06172 Cupin superfamily (DUF985) 7 136 2.7E-41 T 28-03-2018 IPR009327 Cupin domain of unknown function DUF985 APY29_RS21435 995d983bdc2c6fe173f604e31e56959b 105 Gene3D G3DSA:3.30.530.20 6 105 9.7E-13 T 28-03-2018 IPR023393 START-like domain APY29_RS21435 995d983bdc2c6fe173f604e31e56959b 105 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 12 102 1.8E-14 T 28-03-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 APY29_RS21435 995d983bdc2c6fe173f604e31e56959b 105 SUPERFAMILY SSF55961 11 103 3.52E-15 T 28-03-2018 APY29_RS09335 760674785558047edea7a57afef4f257 312 Pfam PF05544 Proline racemase 6 310 1.5E-107 T 28-03-2018 IPR008794 Proline racemase family APY29_RS09335 760674785558047edea7a57afef4f257 312 SUPERFAMILY SSF54506 1 310 1.48E-93 T 28-03-2018 APY29_RS09335 760674785558047edea7a57afef4f257 312 Gene3D G3DSA:3.10.310.10 1 141 1.2E-31 T 28-03-2018 APY29_RS09335 760674785558047edea7a57afef4f257 312 PIRSF PIRSF029792 1 312 1.8E-101 T 28-03-2018 IPR008794 Proline racemase family APY29_RS09335 760674785558047edea7a57afef4f257 312 Gene3D G3DSA:3.10.310.10 142 288 7.1E-43 T 28-03-2018 APY29_RS04925 127a283db0c3c0792c300b2594f05a9d 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 8 305 4.3E-123 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 APY29_RS04925 127a283db0c3c0792c300b2594f05a9d 306 PIRSF PIRSF026649 5 305 3.8E-92 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APY29_RS04925 127a283db0c3c0792c300b2594f05a9d 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 10 296 9.0E-70 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APY29_RS04925 127a283db0c3c0792c300b2594f05a9d 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 305 41.961 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 APY29_RS07050 cc18c3a1ae235637db4aa9717af7c1fc 190 Pfam PF06693 Protein of unknown function (DUF1190) 28 180 2.8E-30 T 28-03-2018 IPR009576 Biofilm formation YgiB APY29_RS11875 f4d80c231f543bff9f8403e8a6f8daae 117 Gene3D G3DSA:1.10.357.10 2 112 5.8E-5 T 28-03-2018 APY29_RS19620 5c10bb6f190b8ff743aab75a84eb7bf8 287 Gene3D G3DSA:3.60.10.10 34 287 1.8E-47 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS19620 5c10bb6f190b8ff743aab75a84eb7bf8 287 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 37 276 6.7E-18 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS19620 5c10bb6f190b8ff743aab75a84eb7bf8 287 SUPERFAMILY SSF56219 33 285 2.62E-42 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase APY29_RS08140 51c4d91cb86940286dfb094c76bc181a 489 SUPERFAMILY SSF56954 75 480 4.05E-74 T 28-03-2018 APY29_RS08140 51c4d91cb86940286dfb094c76bc181a 489 SUPERFAMILY SSF56954 6 40 4.05E-74 T 28-03-2018 APY29_RS08140 51c4d91cb86940286dfb094c76bc181a 489 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 480 5.5E-72 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APY29_RS08140 51c4d91cb86940286dfb094c76bc181a 489 Gene3D G3DSA:1.20.1600.10 26 482 2.4E-64 T 28-03-2018 APY29_RS08140 51c4d91cb86940286dfb094c76bc181a 489 Pfam PF02321 Outer membrane efflux protein 86 272 4.6E-11 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS08140 51c4d91cb86940286dfb094c76bc181a 489 Pfam PF02321 Outer membrane efflux protein 303 478 3.8E-22 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS08700 6d165b904fcbd8ae6f09478d11158976 227 Gene3D G3DSA:2.60.40.10 19 199 7.0E-7 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS08700 6d165b904fcbd8ae6f09478d11158976 227 SUPERFAMILY SSF49464 121 178 1.29E-6 T 28-03-2018 IPR008969 Carboxypeptidase-like, regulatory domain APY29_RS08700 6d165b904fcbd8ae6f09478d11158976 227 SUPERFAMILY SSF49503 48 139 4.06E-20 T 28-03-2018 IPR008972 Cupredoxin APY29_RS16420 bf08fc9d6c418c34f42c4b823ddb251a 194 Pfam PF01339 CheB methylesterase 13 188 7.8E-55 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APY29_RS16420 bf08fc9d6c418c34f42c4b823ddb251a 194 Gene3D G3DSA:3.40.50.180 1 194 7.2E-66 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APY29_RS16420 bf08fc9d6c418c34f42c4b823ddb251a 194 SUPERFAMILY SSF52738 9 192 1.44E-55 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APY29_RS22275 ea7ae218eacb3f4c75fdfb655e4e09ae 305 Pfam PF03547 Membrane transport protein 160 296 2.7E-14 T 28-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 APY29_RS22275 ea7ae218eacb3f4c75fdfb655e4e09ae 305 Pfam PF03547 Membrane transport protein 7 138 4.4E-10 T 28-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 APY29_RS07355 c063db068428326861ca30ebe0b1a8ea 205 Pfam PF09997 Predicted membrane protein (DUF2238) 37 186 4.7E-46 T 28-03-2018 IPR014509 Uncharacterised conserved protein UCP020606 APY29_RS03870 cb5369976970493825d36d8e52d33b55 175 Gene3D G3DSA:1.10.520.20 2 104 5.1E-19 T 28-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03870 cb5369976970493825d36d8e52d33b55 175 SUPERFAMILY SSF47928 3 103 1.83E-18 T 28-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03870 cb5369976970493825d36d8e52d33b55 175 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 175 17.904 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03870 cb5369976970493825d36d8e52d33b55 175 PRINTS PR00125 ATP synthase delta subunit signature 133 148 3.6E-21 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03870 cb5369976970493825d36d8e52d33b55 175 PRINTS PR00125 ATP synthase delta subunit signature 7 26 3.6E-21 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03870 cb5369976970493825d36d8e52d33b55 175 PRINTS PR00125 ATP synthase delta subunit signature 72 83 3.6E-21 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03870 cb5369976970493825d36d8e52d33b55 175 PRINTS PR00125 ATP synthase delta subunit signature 83 97 3.6E-21 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03870 cb5369976970493825d36d8e52d33b55 175 PRINTS PR00125 ATP synthase delta subunit signature 148 166 3.6E-21 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03870 cb5369976970493825d36d8e52d33b55 175 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 173 4.9E-33 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS03870 cb5369976970493825d36d8e52d33b55 175 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 173 5.1E-44 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APY29_RS09765 d87a8fb2f4c3bd5f6b3ae1305952aceb 459 Gene3D G3DSA:3.30.590.10 120 459 8.5E-90 T 28-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 APY29_RS09765 d87a8fb2f4c3bd5f6b3ae1305952aceb 459 Gene3D G3DSA:3.10.20.70 19 117 3.6E-17 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APY29_RS09765 d87a8fb2f4c3bd5f6b3ae1305952aceb 459 SUPERFAMILY SSF54368 23 119 3.79E-12 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APY29_RS09765 d87a8fb2f4c3bd5f6b3ae1305952aceb 459 SUPERFAMILY SSF55931 122 456 2.26E-99 T 28-03-2018 APY29_RS09765 d87a8fb2f4c3bd5f6b3ae1305952aceb 459 SMART SM01230 121 378 1.5E-98 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APY29_RS09765 d87a8fb2f4c3bd5f6b3ae1305952aceb 459 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 28-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 APY29_RS09765 d87a8fb2f4c3bd5f6b3ae1305952aceb 459 Pfam PF00120 Glutamine synthetase, catalytic domain 122 455 1.2E-97 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APY29_RS20315 cd8ea2111ab0b31e316da3af62e79a61 183 Pfam PF02592 Putative vitamin uptake transporter 85 173 2.3E-17 T 28-03-2018 IPR003744 Queuosine precursor transporter APY29_RS20315 cd8ea2111ab0b31e316da3af62e79a61 183 Pfam PF02592 Putative vitamin uptake transporter 44 86 1.2E-8 T 28-03-2018 IPR003744 Queuosine precursor transporter APY29_RS02765 a07980b6693260fbaeb1d6304aac18cf 144 Pfam PF05360 yiaA/B two helix domain 10 62 2.2E-20 T 28-03-2018 IPR008024 YiaAB two helix APY29_RS02765 a07980b6693260fbaeb1d6304aac18cf 144 Pfam PF05360 yiaA/B two helix domain 73 125 1.4E-20 T 28-03-2018 IPR008024 YiaAB two helix APY29_RS18770 34ba01148fc087b0e10bbb45fc6fc095 827 Pfam PF02687 FtsX-like permease family 733 820 3.8E-8 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 APY29_RS18770 34ba01148fc087b0e10bbb45fc6fc095 827 Pfam PF02687 FtsX-like permease family 285 376 6.5E-10 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 APY29_RS00695 dc407fa29793c528c6480d8598bef991 526 Gene3D G3DSA:3.30.2290.10 15 266 1.8E-63 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain APY29_RS00695 dc407fa29793c528c6480d8598bef991 526 SUPERFAMILY SSF111283 24 519 3.79E-88 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 APY29_RS00695 dc407fa29793c528c6480d8598bef991 526 Pfam PF01523 Putative modulator of DNA gyrase 41 367 1.3E-53 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 APY29_RS14825 ff397896c2c705542dca67c0c193df92 163 Gene3D G3DSA:2.40.33.20 11 163 1.9E-27 T 28-03-2018 APY29_RS14825 ff397896c2c705542dca67c0c193df92 163 SUPERFAMILY SSF50800 17 162 1.05E-37 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain APY29_RS14825 ff397896c2c705542dca67c0c193df92 163 Pfam PF03473 MOSC domain 57 161 7.7E-7 T 28-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 APY29_RS16810 1795b49f1aae8ae738f58aeadaeb1bb4 224 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 52 194 3.6E-13 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 APY29_RS16810 1795b49f1aae8ae738f58aeadaeb1bb4 224 SMART SM00478 55 210 1.4E-10 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 APY29_RS16810 1795b49f1aae8ae738f58aeadaeb1bb4 224 SUPERFAMILY SSF48150 38 208 5.58E-37 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 APY29_RS16810 1795b49f1aae8ae738f58aeadaeb1bb4 224 Gene3D G3DSA:1.10.340.30 43 157 1.1E-20 T 28-03-2018 APY29_RS16810 1795b49f1aae8ae738f58aeadaeb1bb4 224 Gene3D G3DSA:1.10.1670.10 159 214 1.1E-16 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 APY29_RS20305 4963d5bbdbe3fd2edef34b719e9c3a34 622 Gene3D G3DSA:3.40.50.200 193 613 4.3E-24 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS20305 4963d5bbdbe3fd2edef34b719e9c3a34 622 SMART SM00944 36 172 1.6E-33 T 28-03-2018 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 APY29_RS20305 4963d5bbdbe3fd2edef34b719e9c3a34 622 Pfam PF09286 Pro-kumamolisin, activation domain 47 169 1.4E-17 T 28-03-2018 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 APY29_RS20305 4963d5bbdbe3fd2edef34b719e9c3a34 622 SUPERFAMILY SSF52743 206 606 1.09E-46 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APY29_RS20305 4963d5bbdbe3fd2edef34b719e9c3a34 622 SUPERFAMILY SSF54897 46 171 2.21E-20 T 28-03-2018 IPR009020 Protease propeptides/proteinase inhibitor I9 APY29_RS10355 ac09c6f5a48d18ac5f837762c8f9d6d1 366 Gene3D G3DSA:3.40.630.10 2 366 1.7E-31 T 28-03-2018 APY29_RS10355 ac09c6f5a48d18ac5f837762c8f9d6d1 366 SUPERFAMILY SSF55031 166 272 3.14E-10 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain APY29_RS10355 ac09c6f5a48d18ac5f837762c8f9d6d1 366 Pfam PF01546 Peptidase family M20/M25/M40 68 362 2.8E-17 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APY29_RS10355 ac09c6f5a48d18ac5f837762c8f9d6d1 366 Pfam PF07687 Peptidase dimerisation domain 164 271 4.6E-14 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain APY29_RS10355 ac09c6f5a48d18ac5f837762c8f9d6d1 366 SUPERFAMILY SSF53187 5 166 7.23E-34 T 28-03-2018 APY29_RS10355 ac09c6f5a48d18ac5f837762c8f9d6d1 366 SUPERFAMILY SSF53187 288 362 7.23E-34 T 28-03-2018 APY29_RS07290 f81e74a879a2dedf89b84421892d3da2 105 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 1.3E-25 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APY29_RS07290 f81e74a879a2dedf89b84421892d3da2 105 Gene3D G3DSA:3.30.160.100 1 96 3.4E-26 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APY29_RS07290 f81e74a879a2dedf89b84421892d3da2 105 SUPERFAMILY SSF69754 1 99 1.96E-30 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APY29_RS07290 f81e74a879a2dedf89b84421892d3da2 105 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 4.5E-23 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APY29_RS02935 f67ab74820cb5b5f990637caacd72253 316 PIRSF PIRSF003097 18 310 2.9E-57 T 28-03-2018 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 APY29_RS19710 be4c71df0832bd5b7858d65e0657c8f7 310 Pfam PF00294 pfkB family carbohydrate kinase 36 290 5.4E-37 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB APY29_RS19710 be4c71df0832bd5b7858d65e0657c8f7 310 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APY29_RS19710 be4c71df0832bd5b7858d65e0657c8f7 310 SUPERFAMILY SSF53613 2 296 2.03E-63 T 28-03-2018 IPR029056 Ribokinase-like APY29_RS19710 be4c71df0832bd5b7858d65e0657c8f7 310 Gene3D G3DSA:3.40.1190.20 1 307 1.9E-47 T 28-03-2018 IPR029056 Ribokinase-like APY29_RS01665 e9242a330214d1fd493c6fe5c047aefe 143 Gene3D G3DSA:3.10.129.10 2 142 5.2E-23 T 28-03-2018 APY29_RS01665 e9242a330214d1fd493c6fe5c047aefe 143 SUPERFAMILY SSF54637 3 139 2.95E-14 T 28-03-2018 IPR029069 HotDog domain APY29_RS04540 4cf7259385c2f30f48a83b759864ff39 385 SUPERFAMILY SSF56112 21 340 2.55E-40 T 28-03-2018 IPR011009 Protein kinase-like domain APY29_RS04540 4cf7259385c2f30f48a83b759864ff39 385 Gene3D G3DSA:3.30.200.20 19 120 6.8E-11 T 28-03-2018 APY29_RS04540 4cf7259385c2f30f48a83b759864ff39 385 Gene3D G3DSA:3.90.1200.10 129 382 6.7E-17 T 28-03-2018 APY29_RS04540 4cf7259385c2f30f48a83b759864ff39 385 Pfam PF01636 Phosphotransferase enzyme family 58 308 3.3E-25 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase APY29_RS01885 24c039943703e31d2dc7292eb3b2b5fe 533 Pfam PF08386 TAP-like protein 417 515 2.3E-19 T 28-03-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal APY29_RS01885 24c039943703e31d2dc7292eb3b2b5fe 533 SUPERFAMILY SSF53474 117 172 1.85E-29 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS01885 24c039943703e31d2dc7292eb3b2b5fe 533 SUPERFAMILY SSF53474 211 265 1.85E-29 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS01885 24c039943703e31d2dc7292eb3b2b5fe 533 SUPERFAMILY SSF53474 363 490 1.85E-29 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS01885 24c039943703e31d2dc7292eb3b2b5fe 533 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 124 132 6.6E-6 T 28-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 APY29_RS01885 24c039943703e31d2dc7292eb3b2b5fe 533 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 155 166 6.6E-6 T 28-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 APY29_RS01885 24c039943703e31d2dc7292eb3b2b5fe 533 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 235 249 6.6E-6 T 28-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 APY29_RS01885 24c039943703e31d2dc7292eb3b2b5fe 533 Gene3D G3DSA:3.40.50.1820 97 512 3.1E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS17985 4fe6ebe625f2afc752ad2ff947827266 132 Gene3D G3DSA:3.30.1370.30 1 68 1.9E-23 T 28-03-2018 APY29_RS17985 4fe6ebe625f2afc752ad2ff947827266 132 Pfam PF00410 Ribosomal protein S8 5 131 1.5E-46 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS17985 4fe6ebe625f2afc752ad2ff947827266 132 Gene3D G3DSA:3.30.1490.10 70 130 1.6E-20 T 28-03-2018 APY29_RS17985 4fe6ebe625f2afc752ad2ff947827266 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS17985 4fe6ebe625f2afc752ad2ff947827266 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 30.386 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS17985 4fe6ebe625f2afc752ad2ff947827266 132 SUPERFAMILY SSF56047 2 131 2.35E-43 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APY29_RS15910 fad6e16515d70187edd79c7d5e966f81 854 Gene3D G3DSA:3.40.630.30 642 822 3.7E-20 T 28-03-2018 APY29_RS15910 fad6e16515d70187edd79c7d5e966f81 854 SUPERFAMILY SSF55729 810 827 8.27E-16 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS15910 fad6e16515d70187edd79c7d5e966f81 854 SUPERFAMILY SSF55729 650 783 8.27E-16 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS15910 fad6e16515d70187edd79c7d5e966f81 854 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 542 828 5.1E-94 T 28-03-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal APY29_RS15910 fad6e16515d70187edd79c7d5e966f81 854 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 22 303 3.9E-8 T 28-03-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD APY29_RS06050 d6fd67978946a868c6c8033888aa11c0 272 Pfam PF11219 Protein of unknown function (DUF3014) 109 265 2.5E-55 T 28-03-2018 IPR021382 Protein of unknown function DUF3014 APY29_RS03040 1c43e1b37b33766c105eb95278bea8b0 422 SUPERFAMILY SSF55277 2 50 4.84E-5 T 28-03-2018 IPR035445 GYF-like domain APY29_RS03040 1c43e1b37b33766c105eb95278bea8b0 422 Pfam PF14237 Domain of unknown function (DUF4339) 4 48 7.4E-14 T 28-03-2018 IPR025640 Domain of unknown function DUF4339 Reactome: R-HSA-6798695 APY29_RS03040 1c43e1b37b33766c105eb95278bea8b0 422 Pfam PF06271 RDD family 220 367 7.7E-22 T 28-03-2018 IPR010432 RDD APY29_RS03040 1c43e1b37b33766c105eb95278bea8b0 422 Gene3D G3DSA:3.30.1490.40 2 57 1.2E-7 T 28-03-2018 IPR035445 GYF-like domain APY29_RS13765 b7d966d677ceb09c90bc808f5ad0f1a2 305 Pfam PF02649 Type I GTP cyclohydrolase folE2 5 291 2.5E-69 T 28-03-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 APY29_RS13765 b7d966d677ceb09c90bc808f5ad0f1a2 305 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 5 296 33.535 T 28-03-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 APY29_RS13765 b7d966d677ceb09c90bc808f5ad0f1a2 305 Gene3D G3DSA:3.10.270.10 4 294 1.3E-80 T 28-03-2018 APY29_RS00705 69d5644f6a6708ee29cb5221ba002eee 444 Gene3D G3DSA:3.30.2290.10 4 211 3.2E-30 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain APY29_RS00705 69d5644f6a6708ee29cb5221ba002eee 444 SUPERFAMILY SSF111283 6 438 6.93E-91 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 APY29_RS00705 69d5644f6a6708ee29cb5221ba002eee 444 Pfam PF01523 Putative modulator of DNA gyrase 25 309 4.9E-53 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 APY29_RS05675 f6585376a304e2b96e4fe66d46cdce89 189 Gene3D G3DSA:3.40.630.30 2 173 9.1E-26 T 28-03-2018 APY29_RS05675 f6585376a304e2b96e4fe66d46cdce89 189 SUPERFAMILY SSF55729 5 173 1.08E-35 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS05675 f6585376a304e2b96e4fe66d46cdce89 189 Pfam PF13302 Acetyltransferase (GNAT) domain 13 148 1.3E-19 T 28-03-2018 IPR000182 GNAT domain GO:0008080 APY29_RS18725 2d3d404df2cad3dd106a33578d828c27 163 Pfam PF04536 TPM domain 22 136 5.4E-14 T 28-03-2018 IPR007621 TPM domain APY29_RS18725 2d3d404df2cad3dd106a33578d828c27 163 Gene3D G3DSA:3.40.47.10 9 82 0.017 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS19150 6c99eac482aa10e5f239438c180e6544 182 SUPERFAMILY SSF55874 11 173 6.16E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS19150 6c99eac482aa10e5f239438c180e6544 182 Gene3D G3DSA:3.30.565.10 9 171 5.6E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS19150 6c99eac482aa10e5f239438c180e6544 182 PRINTS PR00344 Bacterial sensor protein C-terminal signature 97 111 1.6E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS19150 6c99eac482aa10e5f239438c180e6544 182 PRINTS PR00344 Bacterial sensor protein C-terminal signature 115 125 1.6E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS19150 6c99eac482aa10e5f239438c180e6544 182 PRINTS PR00344 Bacterial sensor protein C-terminal signature 156 169 1.6E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS19150 6c99eac482aa10e5f239438c180e6544 182 PRINTS PR00344 Bacterial sensor protein C-terminal signature 131 149 1.6E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APY29_RS19150 6c99eac482aa10e5f239438c180e6544 182 SMART SM00387 60 172 2.8E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS19150 6c99eac482aa10e5f239438c180e6544 182 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 65 170 3.0E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS18235 b12fefecd0620064fcdd7262776c6855 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 195 9.5E-48 T 28-03-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 APY29_RS18235 b12fefecd0620064fcdd7262776c6855 198 Gene3D G3DSA:3.40.50.360 2 198 1.7E-39 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS18235 b12fefecd0620064fcdd7262776c6855 198 Pfam PF03358 NADPH-dependent FMN reductase 64 129 2.7E-8 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APY29_RS18235 b12fefecd0620064fcdd7262776c6855 198 SUPERFAMILY SSF52218 1 195 2.36E-56 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS18235 b12fefecd0620064fcdd7262776c6855 198 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 197 31.207 T 28-03-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 APY29_RS00910 6a9868de90f98dad4f58589c52d6d90a 288 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 41 254 7.3E-43 T 28-03-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 APY29_RS16120 2159c6ef91bfd37241a111526a46089a 344 Gene3D G3DSA:3.90.660.10 70 292 2.0E-55 T 28-03-2018 APY29_RS16120 2159c6ef91bfd37241a111526a46089a 344 Gene3D G3DSA:3.50.50.60 2 69 1.4E-6 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS16120 2159c6ef91bfd37241a111526a46089a 344 PRINTS PR00419 Adrenodoxin reductase family signature 40 53 9.4E-7 T 28-03-2018 APY29_RS16120 2159c6ef91bfd37241a111526a46089a 344 PRINTS PR00419 Adrenodoxin reductase family signature 17 39 9.4E-7 T 28-03-2018 APY29_RS16120 2159c6ef91bfd37241a111526a46089a 344 Pfam PF13450 NAD(P)-binding Rossmann-like domain 20 82 9.0E-16 T 28-03-2018 APY29_RS16120 2159c6ef91bfd37241a111526a46089a 344 SUPERFAMILY SSF51905 293 333 4.32E-31 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS16120 2159c6ef91bfd37241a111526a46089a 344 SUPERFAMILY SSF51905 17 210 4.32E-31 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APY29_RS22300 ba56061dad172d4516a2ef131c79bce9 89 Gene3D G3DSA:1.10.10.10 4 85 2.3E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS22300 ba56061dad172d4516a2ef131c79bce9 89 SUPERFAMILY SSF46785 5 85 5.44E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS22300 ba56061dad172d4516a2ef131c79bce9 89 Pfam PF11625 Protein of unknown function (DUF3253) 7 84 2.1E-26 T 28-03-2018 IPR021660 Protein of unknown function DUF3253 APY29_RS01620 9884ebdc45d6ef67cd185429805fa430 89 Gene3D G3DSA:1.10.1200.10 1 88 1.8E-14 T 28-03-2018 APY29_RS01620 9884ebdc45d6ef67cd185429805fa430 89 Pfam PF00550 Phosphopantetheine attachment site 10 65 9.9E-9 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain APY29_RS01620 9884ebdc45d6ef67cd185429805fa430 89 SUPERFAMILY SSF47336 5 84 2.75E-12 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain APY29_RS10745 425579e4da8a50be2d54e7b00a6a4b24 657 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 111 558 5.2E-104 T 28-03-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 APY29_RS10745 425579e4da8a50be2d54e7b00a6a4b24 657 SUPERFAMILY SSF52540 106 554 8.5E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS10745 425579e4da8a50be2d54e7b00a6a4b24 657 Gene3D G3DSA:3.40.50.300 97 557 6.2E-50 T 28-03-2018 APY29_RS03660 28967b70fe8d444cdae6bee2b8beab35 159 SUPERFAMILY SSF54909 70 157 2.41E-20 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel APY29_RS03660 28967b70fe8d444cdae6bee2b8beab35 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 3.6E-19 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 APY29_RS03660 28967b70fe8d444cdae6bee2b8beab35 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 3.6E-19 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 APY29_RS03660 28967b70fe8d444cdae6bee2b8beab35 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 3.6E-19 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 APY29_RS03660 28967b70fe8d444cdae6bee2b8beab35 159 Pfam PF01037 Lrp/AsnC ligand binding domain 74 148 1.4E-20 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APY29_RS03660 28967b70fe8d444cdae6bee2b8beab35 159 SUPERFAMILY SSF46785 7 66 1.71E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS03660 28967b70fe8d444cdae6bee2b8beab35 159 Gene3D G3DSA:3.30.70.920 61 154 7.3E-24 T 28-03-2018 APY29_RS03660 28967b70fe8d444cdae6bee2b8beab35 159 Gene3D G3DSA:1.10.10.10 2 59 4.0E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS03660 28967b70fe8d444cdae6bee2b8beab35 159 ProSitePatterns PS00519 AsnC-type HTH domain signature. 26 52 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APY29_RS03660 28967b70fe8d444cdae6bee2b8beab35 159 SMART SM00344 8 117 7.0E-46 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 APY29_RS03660 28967b70fe8d444cdae6bee2b8beab35 159 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 3.9E-20 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 APY29_RS04815 00d1787b892b347a23aa62fad4a8a512 461 Pfam PF03600 Citrate transporter 32 405 4.0E-58 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 APY29_RS04815 00d1787b892b347a23aa62fad4a8a512 461 TIGRFAM TIGR00784 citMHS: citrate transporter 20 456 6.5E-191 T 28-03-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 APY29_RS10485 4c6ad896df9c10ae6264889b13e3f3d8 231 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 17 227 1.6E-58 T 28-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria APY29_RS10485 4c6ad896df9c10ae6264889b13e3f3d8 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 112 130 2.1E-49 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10485 4c6ad896df9c10ae6264889b13e3f3d8 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 87 110 2.1E-49 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10485 4c6ad896df9c10ae6264889b13e3f3d8 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 64 81 2.1E-49 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10485 4c6ad896df9c10ae6264889b13e3f3d8 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 204 227 2.1E-49 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10485 4c6ad896df9c10ae6264889b13e3f3d8 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 167 186 2.1E-49 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10485 4c6ad896df9c10ae6264889b13e3f3d8 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 38 59 2.1E-49 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10485 4c6ad896df9c10ae6264889b13e3f3d8 231 Pfam PF03379 CcmB protein 15 228 2.0E-62 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APY29_RS10485 4c6ad896df9c10ae6264889b13e3f3d8 231 PIRSF PIRSF002764 7 231 1.8E-77 T 28-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria APY29_RS08970 a8bada9552019fdb31f79364ab3b4946 136 Pfam PF10671 Toxin co-regulated pilus biosynthesis protein Q 51 122 1.9E-7 T 28-03-2018 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal APY29_RS21365 cca7016dc8b3f0d4271daf1c95be3941 330 Pfam PF13557 Putative MetA-pathway of phenol degradation 72 324 4.0E-49 T 28-03-2018 IPR025737 MetA-pathway of phenol degradation, putative APY29_RS21365 cca7016dc8b3f0d4271daf1c95be3941 330 Gene3D G3DSA:2.40.160.20 15 324 2.3E-4 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APY29_RS04620 127fbdbe23cc1dc2a9c3ffefaa7d1783 551 Gene3D G3DSA:3.50.30.30 264 397 1.2E-23 T 28-03-2018 APY29_RS04620 127fbdbe23cc1dc2a9c3ffefaa7d1783 551 Pfam PF02225 PA domain 307 391 1.1E-16 T 28-03-2018 IPR003137 PA domain APY29_RS04620 127fbdbe23cc1dc2a9c3ffefaa7d1783 551 SUPERFAMILY SSF52025 305 386 1.27E-13 T 28-03-2018 APY29_RS20325 c3968094537128719407b509a6933963 172 Gene3D G3DSA:2.60.120.10 8 168 2.3E-12 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS20325 c3968094537128719407b509a6933963 172 SUPERFAMILY SSF51182 76 124 8.56E-8 T 28-03-2018 IPR011051 RmlC-like cupin domain APY29_RS12645 c05508a098a46a08731dce0c528c04da 110 Gene3D G3DSA:1.20.58.300 52 83 0.21 T 28-03-2018 APY29_RS12645 c05508a098a46a08731dce0c528c04da 110 Gene3D G3DSA:1.20.58.300 3 48 3.9E-5 T 28-03-2018 APY29_RS12645 c05508a098a46a08731dce0c528c04da 110 SUPERFAMILY SSF140566 5 81 5.75E-8 T 28-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 APY29_RS19590 aa1741d6fbd8f926dbea9c6b729c25e2 126 Pfam PF05433 Glycine zipper 2TM domain 66 107 5.8E-10 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 APY29_RS05565 69b5bcc7787c3619fe4d4c6e27c90a8a 168 Pfam PF04191 Phospholipid methyltransferase 57 156 1.7E-13 T 28-03-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 APY29_RS05565 69b5bcc7787c3619fe4d4c6e27c90a8a 168 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 138 168 7.0E-12 T 28-03-2018 APY29_RS14060 1228c2c6ce546296f28f03050a685ea1 259 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 253 41.087 T 28-03-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 APY29_RS14060 1228c2c6ce546296f28f03050a685ea1 259 Pfam PF01975 Survival protein SurE 3 185 5.8E-61 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 APY29_RS14060 1228c2c6ce546296f28f03050a685ea1 259 SUPERFAMILY SSF64167 1 250 9.16E-84 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 APY29_RS14060 1228c2c6ce546296f28f03050a685ea1 259 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 236 2.1E-69 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 APY29_RS14060 1228c2c6ce546296f28f03050a685ea1 259 Gene3D G3DSA:3.40.1210.10 1 255 4.4E-86 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 APY29_RS18340 11fccdfdf6e5bf56a480b8cfbf7efb16 191 SUPERFAMILY SSF55469 7 187 6.54E-30 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 APY29_RS18340 11fccdfdf6e5bf56a480b8cfbf7efb16 191 PIRSF PIRSF000232 1 191 2.4E-61 T 28-03-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like APY29_RS18340 11fccdfdf6e5bf56a480b8cfbf7efb16 191 Pfam PF00881 Nitroreductase family 12 168 8.7E-20 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 APY29_RS18340 11fccdfdf6e5bf56a480b8cfbf7efb16 191 Gene3D G3DSA:3.40.109.10 6 190 3.6E-28 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 APY29_RS05080 33d54b4c811c450eb75da64f13a78b20 187 Pfam PF00406 Adenylate kinase 5 163 3.6E-56 T 28-03-2018 APY29_RS05080 33d54b4c811c450eb75da64f13a78b20 187 Gene3D G3DSA:3.40.50.300 130 187 4.2E-11 T 28-03-2018 APY29_RS05080 33d54b4c811c450eb75da64f13a78b20 187 Gene3D G3DSA:3.40.50.300 1 129 1.7E-39 T 28-03-2018 APY29_RS05080 33d54b4c811c450eb75da64f13a78b20 187 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 28-03-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 APY29_RS05080 33d54b4c811c450eb75da64f13a78b20 187 PRINTS PR00094 Adenylate kinase signature 133 148 2.8E-36 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 APY29_RS05080 33d54b4c811c450eb75da64f13a78b20 187 PRINTS PR00094 Adenylate kinase signature 4 17 2.8E-36 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 APY29_RS05080 33d54b4c811c450eb75da64f13a78b20 187 PRINTS PR00094 Adenylate kinase signature 81 97 2.8E-36 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 APY29_RS05080 33d54b4c811c450eb75da64f13a78b20 187 PRINTS PR00094 Adenylate kinase signature 32 46 2.8E-36 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 APY29_RS05080 33d54b4c811c450eb75da64f13a78b20 187 PRINTS PR00094 Adenylate kinase signature 150 164 2.8E-36 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 APY29_RS05080 33d54b4c811c450eb75da64f13a78b20 187 Hamap MF_00235 Adenylate kinase [adk]. 1 186 47.446 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 APY29_RS05080 33d54b4c811c450eb75da64f13a78b20 187 SUPERFAMILY SSF52540 1 186 2.47E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS22125 cc105a39057ffba85c44c4df02eb030c 144 Pfam PF00581 Rhodanese-like domain 44 135 6.7E-18 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS22125 cc105a39057ffba85c44c4df02eb030c 144 SMART SM00450 42 139 8.2E-24 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS22125 cc105a39057ffba85c44c4df02eb030c 144 SUPERFAMILY SSF52821 23 143 1.7E-29 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS22125 cc105a39057ffba85c44c4df02eb030c 144 Gene3D G3DSA:3.40.250.10 26 144 5.3E-28 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS03160 0382872d3aaef7470d102380297d76a6 71 SUPERFAMILY SSF46955 8 58 5.68E-10 T 28-03-2018 IPR009061 Putative DNA-binding domain APY29_RS03160 0382872d3aaef7470d102380297d76a6 71 Pfam PF12728 Helix-turn-helix domain 9 57 2.5E-19 T 28-03-2018 APY29_RS03160 0382872d3aaef7470d102380297d76a6 71 Gene3D G3DSA:1.10.10.10 8 64 6.3E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS03160 0382872d3aaef7470d102380297d76a6 71 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 9 55 6.2E-19 T 28-03-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 APY29_RS16500 9aac1712159f2f8226ff828567f907ba 249 SMART SM00862 143 220 3.9E-17 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS16500 9aac1712159f2f8226ff828567f907ba 249 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 220 8.8E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APY29_RS16500 9aac1712159f2f8226ff828567f907ba 249 Gene3D G3DSA:3.40.50.2300 3 120 8.4E-7 T 28-03-2018 APY29_RS16500 9aac1712159f2f8226ff828567f907ba 249 SUPERFAMILY SSF46894 121 221 5.72E-23 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APY29_RS16500 9aac1712159f2f8226ff828567f907ba 249 Gene3D G3DSA:1.10.10.10 121 227 8.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain APY29_RS16500 9aac1712159f2f8226ff828567f907ba 249 SUPERFAMILY SSF52172 15 164 8.94E-8 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS11025 a894b45c85eba007117c43549b3c37cd 130 Gene3D G3DSA:1.10.760.10 20 129 2.7E-18 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS11025 a894b45c85eba007117c43549b3c37cd 130 Pfam PF00034 Cytochrome c 58 130 1.5E-7 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS11025 a894b45c85eba007117c43549b3c37cd 130 SUPERFAMILY SSF46626 31 130 3.93E-19 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 APY29_RS14740 6f7710e0800c171b52aad90b69be1755 178 Gene3D G3DSA:1.20.141.10 1 178 3.3E-50 T 28-03-2018 APY29_RS14740 6f7710e0800c171b52aad90b69be1755 178 Pfam PF09374 Predicted Peptidoglycan domain 99 171 2.1E-14 T 28-03-2018 IPR018537 Peptidoglycan binding domain APY29_RS14740 6f7710e0800c171b52aad90b69be1755 178 Pfam PF05838 Glycosyl hydrolase 108 10 97 2.5E-25 T 28-03-2018 IPR008565 Protein of unknown function DUF847 APY29_RS14740 6f7710e0800c171b52aad90b69be1755 178 SUPERFAMILY SSF53955 1 174 2.25E-49 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS01705 53ab70eaa597c2db60e62545f64e0e60 86 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 5 75 1.0E-34 T 28-03-2018 IPR027354 YcgL domain APY29_RS01705 53ab70eaa597c2db60e62545f64e0e60 86 SUPERFAMILY SSF160191 1 75 2.35E-23 T 28-03-2018 APY29_RS01705 53ab70eaa597c2db60e62545f64e0e60 86 Pfam PF05166 YcgL domain 4 75 1.1E-24 T 28-03-2018 IPR027354 YcgL domain APY29_RS01705 53ab70eaa597c2db60e62545f64e0e60 86 Hamap MF_01866 Protein YcgL [ycgL]. 1 86 20.192 T 28-03-2018 IPR027354 YcgL domain APY29_RS16905 081e7b7cb1438f19f7b0d955116c73a2 977 Gene3D G3DSA:3.90.1150.10 787 920 8.3E-44 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS16905 081e7b7cb1438f19f7b0d955116c73a2 977 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 20 965 0.0 T 28-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 APY29_RS16905 081e7b7cb1438f19f7b0d955116c73a2 977 Gene3D G3DSA:3.40.640.10 98 343 1.2E-33 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS16905 081e7b7cb1438f19f7b0d955116c73a2 977 Gene3D G3DSA:3.90.1150.10 344 445 1.1E-24 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS16905 081e7b7cb1438f19f7b0d955116c73a2 977 Pfam PF02347 Glycine cleavage system P-protein 446 729 9.2E-13 T 28-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 APY29_RS16905 081e7b7cb1438f19f7b0d955116c73a2 977 Pfam PF02347 Glycine cleavage system P-protein 19 440 5.0E-177 T 28-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 APY29_RS16905 081e7b7cb1438f19f7b0d955116c73a2 977 Gene3D G3DSA:3.40.640.10 525 786 4.5E-37 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS16905 081e7b7cb1438f19f7b0d955116c73a2 977 SUPERFAMILY SSF53383 20 439 1.99E-102 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS16905 081e7b7cb1438f19f7b0d955116c73a2 977 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 11 971 25.77 T 28-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 APY29_RS16905 081e7b7cb1438f19f7b0d955116c73a2 977 SUPERFAMILY SSF53383 944 966 3.16E-99 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS16905 081e7b7cb1438f19f7b0d955116c73a2 977 SUPERFAMILY SSF53383 471 901 3.16E-99 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS16375 b4157454541395eb3cd30fd8094353b4 263 Pfam PF01578 Cytochrome C assembly protein 41 258 8.1E-32 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APY29_RS21805 7a52bcb40acae27d71beb609caaecc16 291 SUPERFAMILY SSF103481 37 137 9.94E-6 T 28-03-2018 APY29_RS21805 7a52bcb40acae27d71beb609caaecc16 291 SUPERFAMILY SSF103481 184 287 4.71E-5 T 28-03-2018 APY29_RS00145 e8a60d8a1f859a7bf60c0999256edcc7 161 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 43 161 2.1E-21 T 28-03-2018 IPR011979 Conserved hypothetical protein CHP02293 APY29_RS12770 5f0623be84636d1c19baaa2a683a007e 127 Pfam PF00072 Response regulator receiver domain 6 114 4.1E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS12770 5f0623be84636d1c19baaa2a683a007e 127 SUPERFAMILY SSF52172 1 121 1.99E-27 T 28-03-2018 IPR011006 CheY-like superfamily APY29_RS12770 5f0623be84636d1c19baaa2a683a007e 127 Gene3D G3DSA:3.40.50.2300 1 127 1.9E-27 T 28-03-2018 APY29_RS12770 5f0623be84636d1c19baaa2a683a007e 127 SMART SM00448 4 117 3.5E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APY29_RS02230 bdf262625017086935a471234c4f90d3 229 Gene3D G3DSA:3.40.50.300 1 225 2.1E-65 T 28-03-2018 APY29_RS02230 bdf262625017086935a471234c4f90d3 229 SMART SM00382 33 221 3.5E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS02230 bdf262625017086935a471234c4f90d3 229 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APY29_RS02230 bdf262625017086935a471234c4f90d3 229 SUPERFAMILY SSF52540 4 224 2.73E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS02230 bdf262625017086935a471234c4f90d3 229 Pfam PF00005 ABC transporter 24 172 6.1E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Gene3D G3DSA:3.10.20.90 648 681 0.048 T 28-03-2018 APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Gene3D G3DSA:3.10.20.90 852 893 0.37 T 28-03-2018 APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Gene3D G3DSA:3.10.20.90 478 511 0.43 T 28-03-2018 APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Gene3D G3DSA:3.10.20.90 445 477 0.095 T 28-03-2018 APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Gene3D G3DSA:3.10.20.90 614 647 0.069 T 28-03-2018 APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Gene3D G3DSA:3.10.20.90 512 545 0.038 T 28-03-2018 APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Gene3D G3DSA:3.10.20.90 410 444 0.051 T 28-03-2018 APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Gene3D G3DSA:3.10.20.90 819 851 0.1 T 28-03-2018 APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Gene3D G3DSA:3.10.20.90 682 715 0.073 T 28-03-2018 APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Gene3D G3DSA:3.10.20.90 716 749 0.046 T 28-03-2018 APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Gene3D G3DSA:3.10.20.90 750 784 0.066 T 28-03-2018 APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Gene3D G3DSA:3.10.20.90 785 818 0.014 T 28-03-2018 APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Gene3D G3DSA:3.10.20.90 373 409 0.21 T 28-03-2018 APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Gene3D G3DSA:3.10.20.90 546 579 0.43 T 28-03-2018 APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Gene3D G3DSA:3.10.20.90 580 613 0.038 T 28-03-2018 APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Pfam PF03377 TAL effector repeat 663 694 1.2E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Pfam PF03377 TAL effector repeat 391 422 4.9E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Pfam PF03377 TAL effector repeat 799 830 1.1E-14 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Pfam PF03377 TAL effector repeat 867 896 2.4E-10 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Pfam PF03377 TAL effector repeat 323 354 5.5E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Pfam PF03377 TAL effector repeat 357 388 4.4E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Pfam PF03377 TAL effector repeat 765 796 2.1E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Pfam PF03377 TAL effector repeat 833 864 1.5E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Pfam PF03377 TAL effector repeat 731 762 1.1E-14 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Pfam PF03377 TAL effector repeat 561 592 4.4E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Pfam PF03377 TAL effector repeat 697 728 6.6E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Pfam PF03377 TAL effector repeat 289 320 4.4E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Pfam PF03377 TAL effector repeat 527 558 3.6E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Pfam PF03377 TAL effector repeat 629 660 9.6E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Pfam PF03377 TAL effector repeat 425 456 1.1E-14 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Pfam PF03377 TAL effector repeat 595 626 3.6E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Pfam PF03377 TAL effector repeat 459 490 1.4E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Pfam PF03377 TAL effector repeat 493 524 4.4E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Pfam PF03377 TAL effector repeat 903 927 0.043 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23610 ffecb1afffcd878fc1d13f74c17d7c2d 1164 Gene3D G3DSA:3.40.47.10 257 371 0.011 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS10220 baa56a9174ae65de23dbf899be0cd9ea 229 SUPERFAMILY SSF48576 20 226 2.45E-5 T 28-03-2018 IPR008949 Isoprenoid synthase domain APY29_RS10220 baa56a9174ae65de23dbf899be0cd9ea 229 Gene3D G3DSA:1.10.600.10 4 109 6.8E-5 T 28-03-2018 IPR008949 Isoprenoid synthase domain APY29_RS07465 6527a2a5fe2216233f9233e5a749dd20 179 Gene3D G3DSA:3.40.630.30 1 89 5.1E-13 T 28-03-2018 APY29_RS07465 6527a2a5fe2216233f9233e5a749dd20 179 Gene3D G3DSA:3.40.630.30 90 157 1.4E-13 T 28-03-2018 APY29_RS07465 6527a2a5fe2216233f9233e5a749dd20 179 SUPERFAMILY SSF55729 1 155 3.95E-27 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase APY29_RS07465 6527a2a5fe2216233f9233e5a749dd20 179 Pfam PF13673 Acetyltransferase (GNAT) domain 45 145 7.0E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 APY29_RS19605 ecc9c27838680f390a8d17556fa4e4fc 366 SUPERFAMILY SSF102114 56 262 3.66E-6 T 28-03-2018 APY29_RS19605 ecc9c27838680f390a8d17556fa4e4fc 366 Gene3D G3DSA:3.20.20.70 4 271 1.7E-8 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS15725 888be5057c90686bbd789704746610ed 244 SUPERFAMILY SSF53098 26 220 2.58E-66 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS15725 888be5057c90686bbd789704746610ed 244 Hamap MF_00052_B Ribonuclease HII [rnhB]. 32 213 36.784 T 28-03-2018 IPR022898 Ribonuclease HII GO:0004523 APY29_RS15725 888be5057c90686bbd789704746610ed 244 Pfam PF01351 Ribonuclease HII 34 212 3.7E-37 T 28-03-2018 IPR024567 Ribonuclease HII/HIII domain APY29_RS15725 888be5057c90686bbd789704746610ed 244 Gene3D G3DSA:3.30.420.10 24 234 1.9E-66 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS17290 13d91cb69b558634c4ac60640d5ded4c 315 Pfam PF16387 Domain of unknown function 212 308 4.0E-15 T 28-03-2018 IPR032160 Domain of unknown function DUF4996 APY29_RS17290 13d91cb69b558634c4ac60640d5ded4c 315 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 47 164 1.7E-20 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 APY29_RS17290 13d91cb69b558634c4ac60640d5ded4c 315 Gene3D G3DSA:3.20.20.190 27 315 1.3E-44 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APY29_RS17290 13d91cb69b558634c4ac60640d5ded4c 315 SUPERFAMILY SSF51695 43 309 5.76E-43 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APY29_RS13915 bd0b53919ceda7321556c560589917b6 274 Gene3D G3DSA:3.40.1190.20 9 267 1.4E-58 T 28-03-2018 IPR029056 Ribokinase-like APY29_RS13915 bd0b53919ceda7321556c560589917b6 274 Pfam PF08543 Phosphomethylpyrimidine kinase 21 259 2.0E-85 T 28-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 APY29_RS13915 bd0b53919ceda7321556c560589917b6 274 SUPERFAMILY SSF53613 14 268 3.27E-74 T 28-03-2018 IPR029056 Ribokinase-like APY29_RS13915 bd0b53919ceda7321556c560589917b6 274 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 14 258 3.8E-86 T 28-03-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 APY29_RS20170 a74b6c01a706e8adf5f19e31fcba90b9 247 Gene3D G3DSA:3.40.50.300 13 221 8.9E-15 T 28-03-2018 APY29_RS20170 a74b6c01a706e8adf5f19e31fcba90b9 247 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 146 212 3.1E-15 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APY29_RS20170 a74b6c01a706e8adf5f19e31fcba90b9 247 SUPERFAMILY SSF52540 79 212 7.26E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS01245 d134ca502654f864a2eb77a351cca11a 198 SUPERFAMILY SSF56214 29 75 1.31E-6 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 APY29_RS01245 d134ca502654f864a2eb77a351cca11a 198 Gene3D G3DSA:3.90.470.20 94 183 1.1E-17 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 APY29_RS01245 d134ca502654f864a2eb77a351cca11a 198 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 84 171 1.1E-18 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 APY29_RS01245 d134ca502654f864a2eb77a351cca11a 198 SUPERFAMILY SSF56214 83 193 4.45E-27 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 APY29_RS01245 d134ca502654f864a2eb77a351cca11a 198 Gene3D G3DSA:3.90.470.20 28 93 1.4E-10 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 APY29_RS03390 70adc2ffc9459cf9af0dfa82be7ab09f 389 SUPERFAMILY SSF51735 1 332 2.78E-94 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS03390 70adc2ffc9459cf9af0dfa82be7ab09f 389 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 1.3E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain APY29_RS03390 70adc2ffc9459cf9af0dfa82be7ab09f 389 Gene3D G3DSA:3.90.25.10 206 254 1.3E-10 T 28-03-2018 APY29_RS03390 70adc2ffc9459cf9af0dfa82be7ab09f 389 Gene3D G3DSA:3.90.25.10 255 335 1.5E-21 T 28-03-2018 APY29_RS03390 70adc2ffc9459cf9af0dfa82be7ab09f 389 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 333 4.0E-130 T 28-03-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-70370 APY29_RS03390 70adc2ffc9459cf9af0dfa82be7ab09f 389 Gene3D G3DSA:3.40.50.720 1 205 4.0E-42 T 28-03-2018 APY29_RS03760 af300a78fbb91311af0947c8347b67d4 298 SUPERFAMILY SSF103481 185 285 9.94E-10 T 28-03-2018 APY29_RS03760 af300a78fbb91311af0947c8347b67d4 298 SUPERFAMILY SSF103481 48 144 2.35E-15 T 28-03-2018 APY29_RS03760 af300a78fbb91311af0947c8347b67d4 298 Pfam PF00892 EamA-like transporter family 10 141 8.1E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 APY29_RS03760 af300a78fbb91311af0947c8347b67d4 298 Pfam PF00892 EamA-like transporter family 154 280 6.9E-9 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 APY29_RS11395 17d20952a2ce11e080bc7fb0a9c34edb 201 Gene3D G3DSA:3.40.50.1000 2 192 2.3E-19 T 28-03-2018 IPR023214 HAD-like domain APY29_RS11395 17d20952a2ce11e080bc7fb0a9c34edb 201 Pfam PF13419 Haloacid dehalogenase-like hydrolase 79 175 1.4E-8 T 28-03-2018 IPR023214 HAD-like domain APY29_RS11395 17d20952a2ce11e080bc7fb0a9c34edb 201 SUPERFAMILY SSF56784 9 182 1.08E-24 T 28-03-2018 IPR023214 HAD-like domain APY29_RS11395 17d20952a2ce11e080bc7fb0a9c34edb 201 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 126 176 1.2E-9 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APY29_RS12120 c612b8401a3d18c2b0ec83258017d156 199 SUPERFAMILY SSF53790 5 181 2.49E-40 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 APY29_RS12120 c612b8401a3d18c2b0ec83258017d156 199 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 11 159 8.7E-27 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 APY29_RS12120 c612b8401a3d18c2b0ec83258017d156 199 Gene3D G3DSA:3.40.1010.10 3 75 1.8E-13 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 APY29_RS12120 c612b8401a3d18c2b0ec83258017d156 199 Gene3D G3DSA:3.30.950.10 76 193 5.3E-26 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 APY29_RS20810 4a0c1366d6051456247d15beb148876b 168 PIRSF PIRSF019239 8 168 2.9E-38 T 28-03-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 APY29_RS20810 4a0c1366d6051456247d15beb148876b 168 Pfam PF01899 Na+/H+ ion antiporter subunit 19 166 8.6E-42 T 28-03-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 APY29_RS09175 db714ce3a18a4c5f9b3b1abe80c533ae 380 SUPERFAMILY SSF53756 2 370 7.33E-60 T 28-03-2018 APY29_RS09175 db714ce3a18a4c5f9b3b1abe80c533ae 380 Pfam PF00534 Glycosyl transferases group 1 186 335 2.0E-25 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 APY29_RS09175 db714ce3a18a4c5f9b3b1abe80c533ae 380 Pfam PF13439 Glycosyltransferase Family 4 14 179 5.3E-18 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 APY29_RS09175 db714ce3a18a4c5f9b3b1abe80c533ae 380 Gene3D G3DSA:3.40.50.2000 193 361 1.0E-33 T 28-03-2018 APY29_RS09175 db714ce3a18a4c5f9b3b1abe80c533ae 380 Gene3D G3DSA:3.40.50.2000 1 192 2.0E-8 T 28-03-2018 APY29_RS08220 6cf4fd84f7b843e1e5a5c6a923e52e54 80 Pfam PF04070 Domain of unknown function (DUF378) 2 61 2.9E-27 T 28-03-2018 IPR007211 Protein of unknown function DUF378 APY29_RS22075 db0338e3431c8e0070788eb0ac545ba3 409 SUPERFAMILY SSF103473 3 391 4.19E-38 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS22075 db0338e3431c8e0070788eb0ac545ba3 409 Pfam PF07690 Major Facilitator Superfamily 26 291 8.3E-16 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS22075 db0338e3431c8e0070788eb0ac545ba3 409 Gene3D G3DSA:1.20.1250.20 6 187 6.1E-18 T 28-03-2018 APY29_RS22075 db0338e3431c8e0070788eb0ac545ba3 409 Gene3D G3DSA:1.20.1250.20 203 394 1.9E-14 T 28-03-2018 APY29_RS10000 4b8a8d0daba154cf324b2346559a394a 58 Pfam PF12244 Protein of unknown function (DUF3606) 4 57 6.7E-24 T 28-03-2018 IPR022037 Protein of unknown function DUF3606 APY29_RS22365 793e59a5999b51776aa6a155678adc7f 296 SUPERFAMILY SSF56534 20 292 2.09E-103 T 28-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 APY29_RS22365 793e59a5999b51776aa6a155678adc7f 296 Gene3D G3DSA:1.10.800.10 18 296 9.4E-100 T 28-03-2018 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 APY29_RS22365 793e59a5999b51776aa6a155678adc7f 296 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 26 267 3.6E-106 T 28-03-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 APY29_RS22365 793e59a5999b51776aa6a155678adc7f 296 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 33 251 5.2E-50 T 28-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 APY29_RS22365 793e59a5999b51776aa6a155678adc7f 296 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 131 142 - T 28-03-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 APY29_RS22365 793e59a5999b51776aa6a155678adc7f 296 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 88 110 7.0E-13 T 28-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 APY29_RS22365 793e59a5999b51776aa6a155678adc7f 296 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 195 213 7.0E-13 T 28-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 APY29_RS22365 793e59a5999b51776aa6a155678adc7f 296 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 227 246 7.0E-13 T 28-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 APY29_RS22810 96f069b5bead9eb4185196a2d1a66770 190 Gene3D G3DSA:3.30.1450.10 115 182 5.9E-4 T 28-03-2018 APY29_RS11355 78a2b4d4bff626b8b29dc2c8570c4a98 210 SMART SM00953 28 174 4.6E-14 T 28-03-2018 IPR014914 RES domain APY29_RS11355 78a2b4d4bff626b8b29dc2c8570c4a98 210 Pfam PF08808 RES domain 27 176 5.8E-21 T 28-03-2018 IPR014914 RES domain APY29_RS14395 550b7d2b726549f026a878de67004d6d 165 Pfam PF03918 Cytochrome C biogenesis protein 33 158 1.8E-47 T 28-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family APY29_RS21260 8b751b59078445b6de6760814f1bc4df 309 Gene3D G3DSA:3.40.50.1820 29 309 3.7E-38 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS21260 8b751b59078445b6de6760814f1bc4df 309 PRINTS PR00111 Alpha/beta hydrolase fold signature 248 262 2.8E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS21260 8b751b59078445b6de6760814f1bc4df 309 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 107 2.8E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS21260 8b751b59078445b6de6760814f1bc4df 309 PRINTS PR00111 Alpha/beta hydrolase fold signature 142 155 2.8E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS21260 8b751b59078445b6de6760814f1bc4df 309 PRINTS PR00111 Alpha/beta hydrolase fold signature 156 169 2.8E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS21260 8b751b59078445b6de6760814f1bc4df 309 Pfam PF12146 Serine aminopeptidase, S33 52 288 2.5E-24 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 APY29_RS21260 8b751b59078445b6de6760814f1bc4df 309 SUPERFAMILY SSF53474 33 307 1.68E-38 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS00735 96afad02e949fd0ea77c164bfe3e17bc 593 Gene3D G3DSA:3.40.50.880 238 476 2.2E-9 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS16990 5a511c7bbf543275527fdd9d310dc218 281 Gene3D G3DSA:2.40.160.10 50 281 7.4E-4 T 28-03-2018 APY29_RS16990 5a511c7bbf543275527fdd9d310dc218 281 Pfam PF13557 Putative MetA-pathway of phenol degradation 45 281 1.0E-22 T 28-03-2018 IPR025737 MetA-pathway of phenol degradation, putative APY29_RS22240 29665244974c31fee0b749f0c5eb3cd8 267 Pfam PF01553 Acyltransferase 89 199 8.7E-21 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APY29_RS22240 29665244974c31fee0b749f0c5eb3cd8 267 SUPERFAMILY SSF69593 25 216 3.92E-22 T 28-03-2018 APY29_RS22240 29665244974c31fee0b749f0c5eb3cd8 267 SMART SM00563 90 202 5.1E-25 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APY29_RS22240 29665244974c31fee0b749f0c5eb3cd8 267 Gene3D G3DSA:3.40.1130.10 54 267 2.5E-27 T 28-03-2018 APY29_RS13045 d467872773230564a052d354704115e8 98 SUPERFAMILY SSF56935 2 92 3.5E-10 T 28-03-2018 APY29_RS13045 d467872773230564a052d354704115e8 98 Pfam PF00593 TonB dependent receptor 2 94 1.6E-6 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS13045 d467872773230564a052d354704115e8 98 Gene3D G3DSA:2.40.170.20 1 97 6.1E-11 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS04850 ffc13c08b4066e40cb58f7830c77dd23 122 Pfam PF11512 Agrobacterium tumefaciens protein Atu4866 44 118 4.9E-39 T 28-03-2018 IPR020955 Uncharacterised protein family Atu4866 APY29_RS18555 4f7778462da6764a5fe81ec1e4b22c97 250 SUPERFAMILY SSF53474 16 248 2.34E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS18555 4f7778462da6764a5fe81ec1e4b22c97 250 Pfam PF12697 Alpha/beta hydrolase family 45 242 1.4E-10 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS18555 4f7778462da6764a5fe81ec1e4b22c97 250 PRINTS PR00111 Alpha/beta hydrolase fold signature 77 90 5.2E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS18555 4f7778462da6764a5fe81ec1e4b22c97 250 PRINTS PR00111 Alpha/beta hydrolase fold signature 193 207 5.2E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS18555 4f7778462da6764a5fe81ec1e4b22c97 250 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 5.2E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS18555 4f7778462da6764a5fe81ec1e4b22c97 250 Gene3D G3DSA:3.40.50.1820 5 250 7.6E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS16205 afdd670ee54d8898ca078ed5e4635cef 395 SUPERFAMILY SSF52096 22 214 1.42E-57 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS16205 afdd670ee54d8898ca078ed5e4635cef 395 SUPERFAMILY SSF52096 286 359 1.42E-57 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS16205 afdd670ee54d8898ca078ed5e4635cef 395 Gene3D G3DSA:3.90.226.10 3 367 5.0E-74 T 28-03-2018 APY29_RS16205 afdd670ee54d8898ca078ed5e4635cef 395 Pfam PF16113 Enoyl-CoA hydratase/isomerase 25 373 1.3E-112 T 28-03-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 APY29_RS19845 f7adfc7a16e3b0758e3c70653e23feed 208 Gene3D G3DSA:3.40.50.300 30 196 4.2E-9 T 28-03-2018 APY29_RS19845 f7adfc7a16e3b0758e3c70653e23feed 208 SUPERFAMILY SSF52540 36 147 2.37E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS08185 2b77e0ba9c5b5e5cae17d2af98738e08 267 Gene3D G3DSA:1.20.1170.10 21 224 8.7E-4 T 28-03-2018 APY29_RS08185 2b77e0ba9c5b5e5cae17d2af98738e08 267 Pfam PF14257 Domain of unknown function (DUF4349) 26 253 2.4E-27 T 28-03-2018 IPR025645 Domain of unknown function DUF4349 APY29_RS16285 cec177c98f27b9f5b4310c821b82a023 1033 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 956 1032 3.1E-20 T 28-03-2018 IPR022385 Rhs repeat-associated core GO:0097264 APY29_RS16285 cec177c98f27b9f5b4310c821b82a023 1033 Gene3D G3DSA:2.60.40.10 73 178 0.011 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS16285 cec177c98f27b9f5b4310c821b82a023 1033 Gene3D G3DSA:2.60.40.10 413 517 5.8E-5 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS12805 c854e9b985fad139d32aaccb4ba10744 217 Gene3D G3DSA:3.40.50.20 1 86 1.6E-11 T 28-03-2018 APY29_RS12805 c854e9b985fad139d32aaccb4ba10744 217 SUPERFAMILY SSF51161 4 209 2.22E-37 T 28-03-2018 IPR011004 Trimeric LpxA-like APY29_RS12805 c854e9b985fad139d32aaccb4ba10744 217 Gene3D G3DSA:2.160.10.10 87 216 1.0E-32 T 28-03-2018 APY29_RS12805 c854e9b985fad139d32aaccb4ba10744 217 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 5 207 7.4E-51 T 28-03-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like APY29_RS12805 c854e9b985fad139d32aaccb4ba10744 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 150 8.3E-7 T 28-03-2018 IPR001451 Hexapeptide repeat APY29_RS12805 c854e9b985fad139d32aaccb4ba10744 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 158 192 1.7E-6 T 28-03-2018 IPR001451 Hexapeptide repeat APY29_RS21690 3417194fc94211c40c6c767517beb533 296 Pfam PF01522 Polysaccharide deacetylase 74 182 4.9E-10 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 APY29_RS21690 3417194fc94211c40c6c767517beb533 296 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 4 296 7.5E-158 T 28-03-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 APY29_RS21690 3417194fc94211c40c6c767517beb533 296 SUPERFAMILY SSF88713 4 295 2.64E-80 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APY29_RS21690 3417194fc94211c40c6c767517beb533 296 Gene3D G3DSA:3.20.20.370 1 296 1.2E-54 T 28-03-2018 APY29_RS20425 49af3502bbd263bbde9853190a6c98a3 163 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 162 7.6E-51 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 APY29_RS20425 49af3502bbd263bbde9853190a6c98a3 163 SUPERFAMILY SSF51230 88 162 1.96E-23 T 28-03-2018 IPR011053 Single hybrid motif APY29_RS20425 49af3502bbd263bbde9853190a6c98a3 163 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 119 136 - T 28-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 APY29_RS20425 49af3502bbd263bbde9853190a6c98a3 163 Gene3D G3DSA:2.40.50.100 4 163 1.3E-20 T 28-03-2018 APY29_RS20425 49af3502bbd263bbde9853190a6c98a3 163 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 92 105 2.0E-14 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 APY29_RS20425 49af3502bbd263bbde9853190a6c98a3 163 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 124 137 2.0E-14 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 APY29_RS20425 49af3502bbd263bbde9853190a6c98a3 163 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 109 123 2.0E-14 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 APY29_RS20425 49af3502bbd263bbde9853190a6c98a3 163 Pfam PF00364 Biotin-requiring enzyme 89 162 6.9E-22 T 28-03-2018 IPR000089 Biotin/lipoyl attachment APY29_RS10560 f6c2a83bef3be8b9a17ed6f68d47f679 294 Gene3D G3DSA:1.10.3720.10 8 293 8.3E-52 T 28-03-2018 APY29_RS10560 f6c2a83bef3be8b9a17ed6f68d47f679 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 287 2.3E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS10560 f6c2a83bef3be8b9a17ed6f68d47f679 294 SUPERFAMILY SSF161098 55 281 8.11E-63 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS15635 227da22b9d2da068ecf2cc3ef45aae14 344 Pfam PF05229 Spore Coat Protein U domain 26 167 1.4E-17 T 28-03-2018 IPR007893 Spore coat protein U APY29_RS15635 227da22b9d2da068ecf2cc3ef45aae14 344 Pfam PF05229 Spore Coat Protein U domain 210 340 9.7E-34 T 28-03-2018 IPR007893 Spore coat protein U APY29_RS15635 227da22b9d2da068ecf2cc3ef45aae14 344 SMART SM00972 283 341 1.3E-19 T 28-03-2018 IPR007893 Spore coat protein U APY29_RS15635 227da22b9d2da068ecf2cc3ef45aae14 344 SMART SM00972 103 172 3.0E-11 T 28-03-2018 IPR007893 Spore coat protein U APY29_RS01790 c9915c6b616f180571bdd9e0e472b179 108 Gene3D G3DSA:3.40.30.10 1 108 6.6E-18 T 28-03-2018 APY29_RS01790 c9915c6b616f180571bdd9e0e472b179 108 Pfam PF00085 Thioredoxin 5 104 4.2E-11 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 APY29_RS01790 c9915c6b616f180571bdd9e0e472b179 108 SUPERFAMILY SSF52833 4 105 1.51E-17 T 28-03-2018 IPR012336 Thioredoxin-like fold APY29_RS23195 8fd7982f992221e224b1a08c69d3c32b 96 Pfam PF13466 STAS domain 13 74 1.4E-10 T 28-03-2018 IPR002645 STAS domain APY29_RS23195 8fd7982f992221e224b1a08c69d3c32b 96 SUPERFAMILY SSF52091 12 72 4.51E-9 T 28-03-2018 IPR002645 STAS domain APY29_RS23195 8fd7982f992221e224b1a08c69d3c32b 96 Gene3D G3DSA:3.30.750.24 5 88 1.0E-5 T 28-03-2018 IPR002645 STAS domain APY29_RS09165 59382c5faf52d96b0b28f60175f88545 363 Pfam PF01757 Acyltransferase family 30 344 3.5E-25 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 APY29_RS04935 985a8b11b3493ab269e1cb902fa6efc7 438 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 42 219 1.3E-64 T 28-03-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 APY29_RS04935 985a8b11b3493ab269e1cb902fa6efc7 438 SUPERFAMILY SSF53756 58 410 3.52E-19 T 28-03-2018 APY29_RS04935 985a8b11b3493ab269e1cb902fa6efc7 438 Gene3D G3DSA:3.40.50.2000 214 413 5.0E-18 T 28-03-2018 APY29_RS16330 e981395e91328c5d208c80d35d4fa9ad 494 Pfam PF01554 MatE 251 411 1.3E-23 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 APY29_RS16330 e981395e91328c5d208c80d35d4fa9ad 494 Pfam PF01554 MatE 22 183 1.5E-30 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 APY29_RS16330 e981395e91328c5d208c80d35d4fa9ad 494 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 424 1.0E-71 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 APY29_RS16330 e981395e91328c5d208c80d35d4fa9ad 494 PIRSF PIRSF006603 1 458 2.3E-114 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 APY29_RS23190 388885748cb8f7998829803af32fb710 220 Gene3D G3DSA:1.10.10.640 170 218 0.0049 T 28-03-2018 APY29_RS23190 388885748cb8f7998829803af32fb710 220 PIRSF PIRSF004649 9 219 2.4E-57 T 28-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC APY29_RS23190 388885748cb8f7998829803af32fb710 220 Pfam PF05494 MlaC protein 45 206 1.7E-39 T 28-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC APY29_RS23190 388885748cb8f7998829803af32fb710 220 Gene3D G3DSA:3.10.450.50 81 169 1.6E-15 T 28-03-2018 APY29_RS23480 cd6e4cc88ab2f2dfe713882913dc1cd0 60 Gene3D G3DSA:3.30.420.10 1 60 5.6E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS23480 cd6e4cc88ab2f2dfe713882913dc1cd0 60 Pfam PF13683 Integrase core domain 1 52 1.0E-16 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 APY29_RS23480 cd6e4cc88ab2f2dfe713882913dc1cd0 60 SUPERFAMILY SSF53098 1 55 1.52E-10 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS05490 aa450323770fbb74664d9ef67a0b73a0 204 Pfam PF03922 OmpW family 38 199 2.0E-31 T 28-03-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 APY29_RS05490 aa450323770fbb74664d9ef67a0b73a0 204 SUPERFAMILY SSF56925 24 198 9.94E-19 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APY29_RS05490 aa450323770fbb74664d9ef67a0b73a0 204 Gene3D G3DSA:2.40.160.20 23 201 3.0E-21 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APY29_RS03820 2ed5560e43c6d24458930aa5bfdbba43 254 Pfam PF11101 Protein of unknown function (DUF2884) 33 246 1.4E-38 T 28-03-2018 IPR021307 Protein of unknown function DUF2884 APY29_RS02785 e24e717f9e36b52380a56fc06a686382 258 Gene3D G3DSA:2.40.440.10 35 231 5.0E-5 T 28-03-2018 APY29_RS08790 20f30aa2cfb074ad3507a928a7d03a59 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 96 1.4E-22 T 28-03-2018 APY29_RS08790 20f30aa2cfb074ad3507a928a7d03a59 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 19.628 T 28-03-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 APY29_RS23630 86ba23d03fea32481c2c5e455202a04c 210 PIRSF PIRSF009320 2 209 1.2E-27 T 28-03-2018 APY29_RS23630 86ba23d03fea32481c2c5e455202a04c 210 Gene3D G3DSA:3.40.50.300 1 56 1.7E-12 T 28-03-2018 APY29_RS23630 86ba23d03fea32481c2c5e455202a04c 210 Gene3D G3DSA:3.40.50.300 57 209 7.8E-18 T 28-03-2018 APY29_RS23630 86ba23d03fea32481c2c5e455202a04c 210 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 184 2.4E-12 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain APY29_RS23630 86ba23d03fea32481c2c5e455202a04c 210 SUPERFAMILY SSF52540 1 186 4.06E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS14330 65c15c479b3157e921a912a6093c5850 96 Gene3D G3DSA:3.40.250.10 9 90 3.8E-4 T 28-03-2018 IPR001763 Rhodanese-like domain APY29_RS02685 aef4b31f541b08d56a5a6749248303a3 72 Pfam PF11137 Protein of unknown function (DUF2909) 8 65 2.0E-22 T 28-03-2018 IPR021313 Protein of unknown function DUF2909 APY29_RS18915 d821d8f4a13c9afc58bebf02d8a37c3b 260 Pfam PF13649 Methyltransferase domain 45 136 1.5E-13 T 28-03-2018 APY29_RS18915 d821d8f4a13c9afc58bebf02d8a37c3b 260 SUPERFAMILY SSF53335 9 240 2.28E-32 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS18915 d821d8f4a13c9afc58bebf02d8a37c3b 260 Gene3D G3DSA:3.40.50.150 1 252 1.4E-35 T 28-03-2018 APY29_RS07505 5e2e84d2daf5055065b5af77c2e5c654 198 Pfam PF07273 Protein of unknown function (DUF1439) 38 159 2.2E-8 T 28-03-2018 IPR010835 Protein of unknown function DUF1439 APY29_RS06140 4d6c255200225853b1568cec9bff84c6 348 Pfam PF02277 Phosphoribosyltransferase 13 345 2.0E-126 T 28-03-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 APY29_RS06140 4d6c255200225853b1568cec9bff84c6 348 Gene3D G3DSA:3.40.50.10210 71 328 1.8E-98 T 28-03-2018 APY29_RS06140 4d6c255200225853b1568cec9bff84c6 348 Gene3D G3DSA:1.10.1610.10 5 70 3.2E-27 T 28-03-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 APY29_RS06140 4d6c255200225853b1568cec9bff84c6 348 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 12 347 36.589 T 28-03-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 APY29_RS06140 4d6c255200225853b1568cec9bff84c6 348 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 14 345 1.3E-133 T 28-03-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 APY29_RS06140 4d6c255200225853b1568cec9bff84c6 348 SUPERFAMILY SSF52733 5 346 2.88E-113 T 28-03-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 APY29_RS11050 06c1fa5373a1b2b32ac6b6fae6984786 268 Pfam PF00873 AcrB/AcrD/AcrF family 1 239 1.3E-51 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS11050 06c1fa5373a1b2b32ac6b6fae6984786 268 Gene3D G3DSA:1.20.1640.10 16 241 1.8E-44 T 28-03-2018 APY29_RS11050 06c1fa5373a1b2b32ac6b6fae6984786 268 PRINTS PR00702 Acriflavin resistance protein family signature 213 236 3.9E-10 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS11050 06c1fa5373a1b2b32ac6b6fae6984786 268 PRINTS PR00702 Acriflavin resistance protein family signature 132 156 3.9E-10 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS11050 06c1fa5373a1b2b32ac6b6fae6984786 268 PRINTS PR00702 Acriflavin resistance protein family signature 77 100 3.9E-10 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APY29_RS11050 06c1fa5373a1b2b32ac6b6fae6984786 268 SUPERFAMILY SSF82866 16 241 2.88E-48 T 28-03-2018 APY29_RS00770 86b1a6abc2f34287221b3e5a90a627a5 132 Pfam PF10116 Protein required for attachment to host cells 10 131 2.8E-25 T 28-03-2018 IPR019291 Host attachment protein APY29_RS00770 86b1a6abc2f34287221b3e5a90a627a5 132 Gene3D G3DSA:3.30.420.60 10 123 2.2E-14 T 28-03-2018 APY29_RS06610 e863184d74b0bb60f41f03cd2d3684cc 158 SMART SM00260 6 146 0.005 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS06610 e863184d74b0bb60f41f03cd2d3684cc 158 Pfam PF01584 CheW-like domain 11 145 1.2E-14 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS06610 e863184d74b0bb60f41f03cd2d3684cc 158 Gene3D G3DSA:2.40.50.180 29 119 8.3E-8 T 28-03-2018 APY29_RS06610 e863184d74b0bb60f41f03cd2d3684cc 158 SUPERFAMILY SSF50341 5 111 6.02E-13 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS08740 3c4709b0b0dd6537809a97556cbaa7bf 118 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 20 117 1.8E-36 T 28-03-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APY29_RS08740 3c4709b0b0dd6537809a97556cbaa7bf 118 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 118 19.155 T 28-03-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 APY29_RS05470 1ad192d71c90f9a4b40f8738d6a827f5 230 Gene3D G3DSA:1.10.3720.10 3 230 1.9E-36 T 28-03-2018 APY29_RS05470 1ad192d71c90f9a4b40f8738d6a827f5 230 SUPERFAMILY SSF161098 6 221 6.67E-49 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS05470 1ad192d71c90f9a4b40f8738d6a827f5 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 223 5.4E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS05470 1ad192d71c90f9a4b40f8738d6a827f5 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 14 223 9.1E-66 T 28-03-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 APY29_RS19895 ef7b41606e05352b4009fc8955e70907 222 SUPERFAMILY SSF53474 9 218 2.85E-49 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS19895 ef7b41606e05352b4009fc8955e70907 222 Pfam PF02230 Phospholipase/Carboxylesterase 14 216 9.1E-45 T 28-03-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 APY29_RS19895 ef7b41606e05352b4009fc8955e70907 222 Gene3D G3DSA:3.40.50.1820 2 219 1.4E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS07930 f26e3492fcf246147a3f15c60893d0b7 327 Pfam PF00248 Aldo/keto reductase family 16 307 1.4E-74 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS07930 f26e3492fcf246147a3f15c60893d0b7 327 SUPERFAMILY SSF51430 1 312 6.55E-98 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS07930 f26e3492fcf246147a3f15c60893d0b7 327 Gene3D G3DSA:3.20.20.100 1 325 7.0E-102 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS15890 bf7825b69ab3a91033603d7532f709d6 260 Pfam PF06966 Protein of unknown function (DUF1295) 21 250 4.3E-78 T 28-03-2018 IPR010721 Protein of unknown function DUF1295 APY29_RS06770 a072b395d9052e913001336db01a4915 185 SUPERFAMILY SSF55811 10 181 1.62E-36 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 APY29_RS06770 a072b395d9052e913001336db01a4915 185 Pfam PF00293 NUDIX domain 47 159 1.1E-15 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 APY29_RS06770 a072b395d9052e913001336db01a4915 185 Gene3D G3DSA:3.90.79.10 9 185 5.5E-29 T 28-03-2018 APY29_RS06770 a072b395d9052e913001336db01a4915 185 ProSitePatterns PS00893 Nudix box signature. 81 102 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APY29_RS09860 86f2898129a866246db923acc74045cc 327 Gene3D G3DSA:3.40.50.300 111 315 3.8E-26 T 28-03-2018 APY29_RS09860 86f2898129a866246db923acc74045cc 327 Pfam PF02562 PhoH-like protein 112 315 4.9E-92 T 28-03-2018 IPR003714 PhoH-like protein GO:0005524 APY29_RS09860 86f2898129a866246db923acc74045cc 327 SUPERFAMILY SSF52540 117 290 4.59E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS03640 e7213b8ba4557d8bbe4c4d28e4c7ed5e 284 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 28-03-2018 IPR000540 Flagellar motor protein MotA, conserved site APY29_RS03640 e7213b8ba4557d8bbe4c4d28e4c7ed5e 284 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 232 8.6E-8 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APY29_RS03640 e7213b8ba4557d8bbe4c4d28e4c7ed5e 284 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 9.8E-123 T 28-03-2018 IPR022522 Flagellar motor stator, MotA APY29_RS06550 882a41789e7cc8540dfe75b9a1eff5fb 174 SUPERFAMILY SSF48452 65 159 2.88E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS06550 882a41789e7cc8540dfe75b9a1eff5fb 174 Gene3D G3DSA:1.25.40.10 32 165 9.3E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS01910 45b20f1c3d6e4db4ce2ef341d5c3ad56 337 SMART SM00558 79 272 4.2E-5 T 28-03-2018 IPR003347 JmjC domain APY29_RS01910 45b20f1c3d6e4db4ce2ef341d5c3ad56 337 Gene3D G3DSA:2.60.120.650 9 261 9.6E-36 T 28-03-2018 APY29_RS01910 45b20f1c3d6e4db4ce2ef341d5c3ad56 337 Pfam PF13621 Cupin-like domain 23 259 1.7E-55 T 28-03-2018 APY29_RS01910 45b20f1c3d6e4db4ce2ef341d5c3ad56 337 SUPERFAMILY SSF51197 8 322 1.32E-56 T 28-03-2018 APY29_RS06355 ae8641872819151dd664eecea7457102 259 Pfam PF01618 MotA/TolQ/ExbB proton channel family 112 241 8.5E-38 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APY29_RS06355 ae8641872819151dd664eecea7457102 259 TIGRFAM TIGR02796 tolQ: protein TolQ 38 253 4.1E-87 T 28-03-2018 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 APY29_RS06960 5411a9f6ff03ea213347bcf300bf7bf2 189 SMART SM00867 29 187 5.2E-41 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APY29_RS06960 5411a9f6ff03ea213347bcf300bf7bf2 189 SUPERFAMILY SSF101874 31 187 6.28E-36 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APY29_RS06960 5411a9f6ff03ea213347bcf300bf7bf2 189 Gene3D G3DSA:2.40.128.110 28 189 6.4E-33 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APY29_RS06960 5411a9f6ff03ea213347bcf300bf7bf2 189 Pfam PF04264 YceI-like domain 47 184 1.3E-25 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APY29_RS02700 3356158d323c1891712f67a896fd8417 387 Pfam PF02628 Cytochrome oxidase assembly protein 133 377 3.0E-45 T 28-03-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 APY29_RS02700 3356158d323c1891712f67a896fd8417 387 Pfam PF02628 Cytochrome oxidase assembly protein 15 131 1.3E-19 T 28-03-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 APY29_RS01445 c209e1436c241998723d3766327b20d4 435 SUPERFAMILY SSF53254 34 428 6.06E-48 T 28-03-2018 IPR029033 Histidine phosphatase superfamily APY29_RS01445 c209e1436c241998723d3766327b20d4 435 Gene3D G3DSA:3.40.50.1240 28 434 3.3E-37 T 28-03-2018 IPR029033 Histidine phosphatase superfamily APY29_RS01445 c209e1436c241998723d3766327b20d4 435 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 35 138 3.5E-7 T 28-03-2018 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 APY29_RS13630 8a1863f256debe2c4ee3371d1f286791 289 SUPERFAMILY SSF103481 171 268 1.7E-15 T 28-03-2018 APY29_RS13630 8a1863f256debe2c4ee3371d1f286791 289 Pfam PF00892 EamA-like transporter family 136 264 6.1E-17 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 APY29_RS13630 8a1863f256debe2c4ee3371d1f286791 289 Pfam PF00892 EamA-like transporter family 1 127 1.5E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 APY29_RS13630 8a1863f256debe2c4ee3371d1f286791 289 SUPERFAMILY SSF103481 30 131 1.57E-17 T 28-03-2018 APY29_RS03275 38416778b86a549f1fbe54df80d69870 261 Gene3D G3DSA:3.40.50.1820 22 255 1.5E-24 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS03275 38416778b86a549f1fbe54df80d69870 261 Pfam PF12697 Alpha/beta hydrolase family 36 247 4.3E-17 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS03275 38416778b86a549f1fbe54df80d69870 261 SUPERFAMILY SSF53474 32 251 1.0E-28 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS09700 7fa5bc1ed1ccf7c598d165e81d2b7384 434 Gene3D G3DSA:1.10.357.10 236 404 1.8E-4 T 28-03-2018 APY29_RS09700 7fa5bc1ed1ccf7c598d165e81d2b7384 434 Pfam PF04286 Protein of unknown function (DUF445) 55 431 3.0E-104 T 28-03-2018 IPR007383 Protein of unknown function DUF445 APY29_RS12540 fe92835d33335c16cb44dfde8f2d831d 133 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 10 128 16.945 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 APY29_RS12540 fe92835d33335c16cb44dfde8f2d831d 133 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 12 123 2.0E-19 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 APY29_RS11360 5b28afad8274cfd130f759c1a2c50a8c 121 Pfam PF12553 Protein of unknown function (DUF3742) 1 105 1.7E-35 T 28-03-2018 IPR022213 Protein of unknown function DUF3742 APY29_RS08925 55e3818ee146abf2960c9334579a6c41 175 Pfam PF14341 PilX N-terminal 21 69 9.2E-12 T 28-03-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain APY29_RS14960 b2a06781d2443ff90c919d6d9d789943 481 Gene3D G3DSA:3.40.50.1110 261 475 9.1E-33 T 28-03-2018 APY29_RS14960 b2a06781d2443ff90c919d6d9d789943 481 Gene3D G3DSA:3.40.50.1110 17 238 5.8E-27 T 28-03-2018 APY29_RS14960 b2a06781d2443ff90c919d6d9d789943 481 SUPERFAMILY SSF52266 258 474 2.44E-47 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain APY29_RS14960 b2a06781d2443ff90c919d6d9d789943 481 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 291 467 1.1E-22 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain APY29_RS14960 b2a06781d2443ff90c919d6d9d789943 481 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 48 224 1.4E-19 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain APY29_RS14960 b2a06781d2443ff90c919d6d9d789943 481 SUPERFAMILY SSF52266 13 238 5.8E-39 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain APY29_RS00895 4e076fd33cc9ef53751ccf92845ddf33 222 SUPERFAMILY SSF101082 26 207 3.27E-39 T 28-03-2018 IPR023220 Type IV secretion system, VirB5-domain APY29_RS00895 4e076fd33cc9ef53751ccf92845ddf33 222 Pfam PF07996 Type IV secretion system proteins 26 208 2.6E-30 T 28-03-2018 IPR014158 Type IV secretion system, VirB5 APY29_RS00895 4e076fd33cc9ef53751ccf92845ddf33 222 Gene3D G3DSA:1.20.58.430 26 212 1.1E-18 T 28-03-2018 APY29_RS16815 6331474ccebaa6e9d321e12cf5fe47f7 123 Pfam PF04241 Protein of unknown function (DUF423) 28 106 1.8E-7 T 28-03-2018 IPR006696 Protein of unknown function DUF423 APY29_RS15825 aae626d9b02652e1461a40901dc2664d 149 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 29 148 1.8E-33 T 28-03-2018 IPR019223 Domain of unknown function DUF2147 APY29_RS10935 67263a55349786806d5702b8156050a3 399 Gene3D G3DSA:1.20.1170.10 140 345 0.0028 T 28-03-2018 APY29_RS10935 67263a55349786806d5702b8156050a3 399 Pfam PF09712 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) 12 300 1.1E-81 T 28-03-2018 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit APY29_RS10935 67263a55349786806d5702b8156050a3 399 TIGRFAM TIGR01834 PHA_synth_III_E: poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit 11 312 1.6E-119 T 28-03-2018 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit APY29_RS10700 200dcc40426c32295726c6bbcd99e47e 138 Pfam PF07511 Protein of unknown function (DUF1525) 23 135 2.2E-33 T 28-03-2018 IPR011090 Integrating conjugative element protein, PFL4709 APY29_RS10700 200dcc40426c32295726c6bbcd99e47e 138 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 23 134 2.2E-35 T 28-03-2018 IPR011090 Integrating conjugative element protein, PFL4709 APY29_RS07550 4f718804a8581d217dd8080747b42dd8 218 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 34 206 4.3E-31 T 28-03-2018 IPR003740 Uncharacterised membrane protein YitT APY29_RS05500 ea4e5ea140fd91fe5c61439f942dbe8e 170 PIRSF PIRSF028470 1 162 2.8E-73 T 28-03-2018 IPR016887 Uncharacterised conserved protein UCP028470, steroid isomerase-related APY29_RS05500 ea4e5ea140fd91fe5c61439f942dbe8e 170 Gene3D G3DSA:3.10.450.50 20 169 2.7E-31 T 28-03-2018 APY29_RS05500 ea4e5ea140fd91fe5c61439f942dbe8e 170 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 36 159 1.8E-41 T 28-03-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 APY29_RS05500 ea4e5ea140fd91fe5c61439f942dbe8e 170 Pfam PF08332 Calcium/calmodulin dependent protein kinase II association domain 36 159 8.8E-48 T 28-03-2018 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain GO:0004683|GO:0005516|GO:0006468 Reactome: R-HSA-3371571|Reactome: R-HSA-399719|Reactome: R-HSA-438066|Reactome: R-HSA-442729|Reactome: R-HSA-442742|Reactome: R-HSA-442982|Reactome: R-HSA-5576892|Reactome: R-HSA-5578775|Reactome: R-HSA-5673001|Reactome: R-HSA-877300|Reactome: R-HSA-936837 APY29_RS05500 ea4e5ea140fd91fe5c61439f942dbe8e 170 SUPERFAMILY SSF54427 36 158 2.73E-32 T 28-03-2018 IPR032710 NTF2-like domain APY29_RS00925 ef26562b54a9494fd815e1b3e0329712 406 Pfam PF03743 Bacterial conjugation TrbI-like protein 208 385 6.1E-51 T 28-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI APY29_RS06650 ed0b82ad121bedb02d387d1ba043fce8 386 Pfam PF13088 BNR repeat-like domain 61 337 6.6E-89 T 28-03-2018 IPR011040 Sialidases KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 APY29_RS06650 ed0b82ad121bedb02d387d1ba043fce8 386 SUPERFAMILY SSF50939 36 354 5.23E-63 T 28-03-2018 IPR011040 Sialidases KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 APY29_RS06650 ed0b82ad121bedb02d387d1ba043fce8 386 Gene3D G3DSA:2.120.10.10 35 360 5.5E-53 T 28-03-2018 APY29_RS07630 aff29740f6cb32752e91da256b367a7a 266 SUPERFAMILY SSF53474 35 263 5.81E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS07630 aff29740f6cb32752e91da256b367a7a 266 Gene3D G3DSA:3.40.50.1820 16 266 6.6E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS07630 aff29740f6cb32752e91da256b367a7a 266 Pfam PF01738 Dienelactone hydrolase family 52 262 1.7E-35 T 28-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 APY29_RS13890 76bd7502d25054ea69985174cca286f3 116 Gene3D G3DSA:3.30.70.970 1 114 1.1E-19 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain APY29_RS13890 76bd7502d25054ea69985174cca286f3 116 Pfam PF06877 Regulator of ribonuclease activity B 9 113 1.2E-19 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain APY29_RS13890 76bd7502d25054ea69985174cca286f3 116 SUPERFAMILY SSF89946 22 110 6.54E-6 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain APY29_RS06315 40a482cb909349dcc96dc6bb7f917977 225 Pfam PF12697 Alpha/beta hydrolase family 27 193 6.0E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS06315 40a482cb909349dcc96dc6bb7f917977 225 Gene3D G3DSA:3.40.50.1820 23 225 1.4E-16 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS06315 40a482cb909349dcc96dc6bb7f917977 225 SUPERFAMILY SSF53474 25 206 2.76E-18 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS04475 96a6e5e75d19f0e38f1ced6fa0bcb00d 169 SUPERFAMILY SSF54523 26 148 2.28E-9 T 28-03-2018 APY29_RS04475 96a6e5e75d19f0e38f1ced6fa0bcb00d 169 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 21 156 1.1E-13 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 APY29_RS04475 96a6e5e75d19f0e38f1ced6fa0bcb00d 169 Pfam PF12019 Type II transport protein GspH 63 154 5.9E-6 T 28-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 APY29_RS04475 96a6e5e75d19f0e38f1ced6fa0bcb00d 169 Gene3D G3DSA:3.55.40.10 55 162 2.4E-6 T 28-03-2018 APY29_RS05990 58b46dafae0fc69c1bd75486b7880fa6 144 Pfam PF04134 Protein of unknown function, DUF393 18 127 2.5E-33 T 28-03-2018 IPR007263 Protein of unknown function DUF393 APY29_RS07560 358316756a93473a366b2ef708470f7b 190 Pfam PF03352 Methyladenine glycosylase 11 119 3.6E-39 T 28-03-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 APY29_RS07560 358316756a93473a366b2ef708470f7b 190 Gene3D G3DSA:1.10.340.30 2 130 9.5E-43 T 28-03-2018 APY29_RS07560 358316756a93473a366b2ef708470f7b 190 SUPERFAMILY SSF48150 4 167 2.67E-51 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 APY29_RS00745 f9f2d5035344818075a064caf6f501cf 263 Pfam PF12787 EcsC protein family 23 244 7.2E-39 T 28-03-2018 IPR024787 EcsC protein APY29_RS17830 c3531aa526a96a0b2e4b3c8623fe26d1 171 Gene3D G3DSA:3.40.50.720 13 168 4.6E-5 T 28-03-2018 APY29_RS03285 8ff0ab690a7489ded50b9b80695aa598 50 SUPERFAMILY SSF53850 2 41 7.6E-5 T 28-03-2018 APY29_RS07005 4685223ced030e3c1c16cb4f1956f43c 84 SUPERFAMILY SSF142921 6 73 2.35E-6 T 28-03-2018 IPR008893 WGR domain APY29_RS09960 95a24a83b31f0bdb1cd0241f007966e8 47 Pfam PF11867 Domain of unknown function (DUF3387) 10 41 3.5E-9 T 28-03-2018 IPR021810 Protein of unknown function DUF3387 APY29_RS20800 dfbc700533d6002460101e81a78bd540 124 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 109 1.5E-22 T 28-03-2018 APY29_RS08145 eb0e300378b80a4be7af2897f7de00c5 278 Pfam PF06629 MltA-interacting protein MipA 52 277 1.3E-29 T 28-03-2018 IPR010583 MltA-interacting MipA APY29_RS08600 7f3c902624e04351053191478b0299c6 527 Pfam PF01464 Transglycosylase SLT domain 198 305 3.1E-22 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 APY29_RS08600 7f3c902624e04351053191478b0299c6 527 SUPERFAMILY SSF53955 195 341 2.34E-34 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS08600 7f3c902624e04351053191478b0299c6 527 Gene3D G3DSA:1.10.530.10 175 343 1.2E-32 T 28-03-2018 APY29_RS08600 7f3c902624e04351053191478b0299c6 527 SUPERFAMILY SSF54106 477 522 2.75E-7 T 28-03-2018 IPR018392 LysM domain APY29_RS08600 7f3c902624e04351053191478b0299c6 527 Gene3D G3DSA:3.10.350.10 473 527 1.3E-10 T 28-03-2018 APY29_RS08600 7f3c902624e04351053191478b0299c6 527 SMART SM00257 478 523 7.4E-10 T 28-03-2018 IPR018392 LysM domain APY29_RS08600 7f3c902624e04351053191478b0299c6 527 Pfam PF01476 LysM domain 479 522 4.2E-10 T 28-03-2018 IPR018392 LysM domain APY29_RS20890 d7ec4bd8c7652c411e36b769db9b08ea 127 Gene3D G3DSA:2.30.30.40 1 63 1.3E-4 T 28-03-2018 APY29_RS20890 d7ec4bd8c7652c411e36b769db9b08ea 127 Gene3D G3DSA:2.30.30.40 64 119 3.3E-10 T 28-03-2018 APY29_RS20890 d7ec4bd8c7652c411e36b769db9b08ea 127 SUPERFAMILY SSF50044 62 125 1.71E-9 T 28-03-2018 IPR001452 SH3 domain GO:0005515 APY29_RS20890 d7ec4bd8c7652c411e36b769db9b08ea 127 PIRSF PIRSF034961 1 114 8.8E-48 T 28-03-2018 IPR014593 Uncharacterised conserved protein UCP034961, SH3-2 APY29_RS20890 d7ec4bd8c7652c411e36b769db9b08ea 127 Pfam PF07653 Variant SH3 domain 2 57 5.5E-6 T 28-03-2018 IPR011511 Variant SH3 domain APY29_RS20890 d7ec4bd8c7652c411e36b769db9b08ea 127 SMART SM00326 61 113 5.3E-4 T 28-03-2018 IPR001452 SH3 domain GO:0005515 APY29_RS15225 345fce3272ad16ee6fcb60a82cff97ad 95 Pfam PF03658 RnfH family Ubiquitin 5 82 7.5E-21 T 28-03-2018 IPR005346 RnfH protein APY29_RS15225 345fce3272ad16ee6fcb60a82cff97ad 95 SUPERFAMILY SSF54285 5 74 1.18E-16 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APY29_RS15225 345fce3272ad16ee6fcb60a82cff97ad 95 Hamap MF_00460 Protein RnfH [rnfH]. 5 90 19.833 T 28-03-2018 IPR005346 RnfH protein APY29_RS15225 345fce3272ad16ee6fcb60a82cff97ad 95 Gene3D G3DSA:3.10.20.280 2 83 2.3E-25 T 28-03-2018 IPR005346 RnfH protein APY29_RS23435 074d8cddde7eafa6668ca2007181951d 145 Gene3D G3DSA:1.10.357.10 21 133 4.2E-4 T 28-03-2018 APY29_RS23540 25d803200d7ba7c79b838815fc00d653 209 PIRSF PIRSF009320 1 209 3.6E-45 T 28-03-2018 APY29_RS23540 25d803200d7ba7c79b838815fc00d653 209 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 173 1.6E-15 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain APY29_RS23540 25d803200d7ba7c79b838815fc00d653 209 SUPERFAMILY SSF52540 1 208 6.75E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS23540 25d803200d7ba7c79b838815fc00d653 209 Gene3D G3DSA:3.40.50.300 1 69 1.2E-16 T 28-03-2018 APY29_RS23540 25d803200d7ba7c79b838815fc00d653 209 Gene3D G3DSA:3.40.50.300 70 208 9.2E-19 T 28-03-2018 APY29_RS13305 8f8788c7a1507f71ab8b926d68dfd8c9 335 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 65 142 1.3E-21 T 28-03-2018 IPR022385 Rhs repeat-associated core GO:0097264 APY29_RS13305 8f8788c7a1507f71ab8b926d68dfd8c9 335 Pfam PF15649 Restriction endonuclease fold toxin 7 239 320 2.2E-13 T 28-03-2018 IPR028903 Tox-REase-7 domain APY29_RS00640 8ef925475b1df1d6c9e8d6acdaa3ae6f 256 Pfam PF13369 Transglutaminase-like superfamily 87 221 6.7E-10 T 28-03-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 APY29_RS08315 d9f15ef138a9989718f206255ff13a44 244 Pfam PF04402 Protein of unknown function (DUF541) 40 240 1.4E-53 T 28-03-2018 IPR007497 Protein of unknown function DUF541 APY29_RS21505 52606ba3b75e1ac1a1cf6812df275154 221 Gene3D G3DSA:3.40.50.620 37 172 4.3E-4 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS21505 52606ba3b75e1ac1a1cf6812df275154 221 Pfam PF02677 Uncharacterized BCR, COG1636 19 193 1.4E-64 T 28-03-2018 IPR003828 Probable epoxyqueuosine reductase QueH APY29_RS11465 57a99a2b9351de5376592bc31e2fbb4b 136 Pfam PF11990 Protein of unknown function (DUF3487) 12 130 3.0E-41 T 28-03-2018 IPR021877 Protein of unknown function DUF3487 APY29_RS11465 57a99a2b9351de5376592bc31e2fbb4b 136 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 14 129 3.8E-42 T 28-03-2018 IPR021877 Protein of unknown function DUF3487 APY29_RS00345 76b0c1621579d4891ae7cd5bd9bc73c1 247 Pfam PF05711 Macrocin-O-methyltransferase (TylF) 92 199 2.3E-11 T 28-03-2018 IPR008884 Macrocin-O-methyltransferase APY29_RS00345 76b0c1621579d4891ae7cd5bd9bc73c1 247 Gene3D G3DSA:3.40.50.150 82 220 5.9E-5 T 28-03-2018 APY29_RS05750 fdb37d3e74b4b7d66c75cc71e1ef93bc 252 SUPERFAMILY SSF53335 23 241 3.92E-38 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS05750 fdb37d3e74b4b7d66c75cc71e1ef93bc 252 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 30 244 28.018 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 APY29_RS05750 fdb37d3e74b4b7d66c75cc71e1ef93bc 252 Pfam PF02390 Putative methyltransferase 71 239 1.5E-48 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 APY29_RS05750 fdb37d3e74b4b7d66c75cc71e1ef93bc 252 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 57 242 4.7E-46 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 APY29_RS05750 fdb37d3e74b4b7d66c75cc71e1ef93bc 252 Gene3D G3DSA:3.40.50.150 36 246 4.9E-28 T 28-03-2018 APY29_RS21015 6613e46f3c1b79e680e9ab071a75d2a2 702 Gene3D G3DSA:3.40.720.10 146 442 1.0E-36 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APY29_RS21015 6613e46f3c1b79e680e9ab071a75d2a2 702 SUPERFAMILY SSF53649 155 457 5.07E-41 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APY29_RS21015 6613e46f3c1b79e680e9ab071a75d2a2 702 Pfam PF00884 Sulfatase 157 441 8.1E-25 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APY29_RS21015 6613e46f3c1b79e680e9ab071a75d2a2 702 Hamap MF_01070 Phosphoglycerol transferase I [mdoB]. 1 702 58.51 T 28-03-2018 IPR020881 Phosphoglycerol transferase I GO:0005886|GO:0008960|GO:0009250 KEGG: 00561+2.7.8.20 APY29_RS09005 dfd61cd89e1949d87019775369d4dd49 103 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 2 83 3.2E-23 T 28-03-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB APY29_RS18510 40dd76e2d74a78eb896b9fbc84e99c14 275 SUPERFAMILY SSF52096 4 259 3.53E-69 T 28-03-2018 IPR029045 ClpP/crotonase-like domain APY29_RS18510 40dd76e2d74a78eb896b9fbc84e99c14 275 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 259 1.8E-48 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APY29_RS18510 40dd76e2d74a78eb896b9fbc84e99c14 275 Gene3D G3DSA:3.90.226.10 2 273 3.5E-66 T 28-03-2018 APY29_RS23320 9328f99e3ca7b3e0127070c19f9ac8d4 364 SUPERFAMILY SSF51695 31 360 1.57E-70 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APY29_RS23320 9328f99e3ca7b3e0127070c19f9ac8d4 364 Gene3D G3DSA:3.20.20.190 20 364 1.1E-64 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APY29_RS23320 9328f99e3ca7b3e0127070c19f9ac8d4 364 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 36 354 2.9E-46 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 APY29_RS00425 35e2f9c6745a7b734bda159c9d05f3da 395 Pfam PF14907 Uncharacterised nucleotidyltransferase 64 283 2.3E-42 T 28-03-2018 APY29_RS02470 31f599a83a6fc370bba7720a7cfec67b 203 Pfam PF09851 Short C-terminal domain 175 200 7.0E-9 T 28-03-2018 IPR018649 SHOCT domain APY29_RS02470 31f599a83a6fc370bba7720a7cfec67b 203 Pfam PF14470 Bacterial PH domain 28 121 2.9E-18 T 28-03-2018 APY29_RS17790 7800e92bb6fd85b98d16a8c98a407ca4 238 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 26 225 1.5E-24 T 28-03-2018 IPR010239 Conserved hypothetical protein CHP02001 APY29_RS17790 7800e92bb6fd85b98d16a8c98a407ca4 238 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 1 238 3.7E-75 T 28-03-2018 IPR010239 Conserved hypothetical protein CHP02001 APY29_RS23545 64820e93ab868c536633adacc7c482db 71 SUPERFAMILY SSF47598 15 68 4.22E-13 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 APY29_RS23545 64820e93ab868c536633adacc7c482db 71 Pfam PF09274 ParG 28 66 7.7E-7 T 28-03-2018 IPR015354 DNA partition complex, ParG APY29_RS23545 64820e93ab868c536633adacc7c482db 71 Gene3D G3DSA:1.10.1220.10 2 71 3.4E-14 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APY29_RS12260 b8e907bbcb51780c339628be5baa46fa 139 Gene3D G3DSA:1.20.58.430 24 138 3.7E-8 T 28-03-2018 APY29_RS12260 b8e907bbcb51780c339628be5baa46fa 139 Pfam PF07996 Type IV secretion system proteins 24 133 8.9E-15 T 28-03-2018 IPR014158 Type IV secretion system, VirB5 APY29_RS12260 b8e907bbcb51780c339628be5baa46fa 139 SUPERFAMILY SSF101082 24 137 1.83E-21 T 28-03-2018 IPR023220 Type IV secretion system, VirB5-domain APY29_RS23365 b8e907bbcb51780c339628be5baa46fa 139 Gene3D G3DSA:1.20.58.430 24 138 3.7E-8 T 28-03-2018 APY29_RS23365 b8e907bbcb51780c339628be5baa46fa 139 Pfam PF07996 Type IV secretion system proteins 24 133 8.9E-15 T 28-03-2018 IPR014158 Type IV secretion system, VirB5 APY29_RS23365 b8e907bbcb51780c339628be5baa46fa 139 SUPERFAMILY SSF101082 24 137 1.83E-21 T 28-03-2018 IPR023220 Type IV secretion system, VirB5-domain APY29_RS21340 2d38ef39fb35e9c2170af6c2cfeeae3e 170 Pfam PF12680 SnoaL-like domain 53 155 2.5E-10 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain APY29_RS21340 2d38ef39fb35e9c2170af6c2cfeeae3e 170 Gene3D G3DSA:3.10.450.50 39 163 5.3E-17 T 28-03-2018 APY29_RS21340 2d38ef39fb35e9c2170af6c2cfeeae3e 170 SUPERFAMILY SSF54427 44 157 1.2E-20 T 28-03-2018 IPR032710 NTF2-like domain APY29_RS21475 a60e8a296bac85859133c1bcd51e8739 485 SUPERFAMILY SSF56935 117 485 1.04E-10 T 28-03-2018 APY29_RS21475 a60e8a296bac85859133c1bcd51e8739 485 Pfam PF07396 Phosphate-selective porin O and P 125 485 1.6E-84 T 28-03-2018 IPR010870 Phosphate-selective porin O/P APY29_RS21475 a60e8a296bac85859133c1bcd51e8739 485 Gene3D G3DSA:2.40.160.10 88 485 6.6E-55 T 28-03-2018 APY29_RS00880 b51d0fb547f34c114f3e73a8b6282a16 125 Pfam PF04956 TrbC/VIRB2 family 26 115 6.1E-21 T 28-03-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 APY29_RS00090 eeea07ebdcc2536fb294f207fe6c79dd 216 Gene3D G3DSA:1.20.1170.10 2 178 7.0E-4 T 28-03-2018 APY29_RS05950 2810337bd6343c8c2ef4b365e2f8be0d 115 Gene3D G3DSA:1.20.1000.10 8 95 1.6E-6 T 28-03-2018 APY29_RS11415 0b73c554425ef25a16b69b8e6b16efe6 76 Pfam PF05598 Transposase domain (DUF772) 53 76 1.0E-5 T 28-03-2018 IPR008490 Transposase InsH, N-terminal APY29_RS19595 5a9ad5180a9e83ed80fc0ca94d52b29f 271 Pfam PF10001 Uncharacterized protein conserved in bacteria (DUF2242) 66 185 1.1E-48 T 28-03-2018 IPR018718 Protein of unknown function DUF2242 APY29_RS03555 c0784b6e2f5856e36fbb580c7e2c1111 189 Pfam PF03358 NADPH-dependent FMN reductase 46 121 3.9E-9 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APY29_RS03555 c0784b6e2f5856e36fbb580c7e2c1111 189 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 28-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 APY29_RS03555 c0784b6e2f5856e36fbb580c7e2c1111 189 Gene3D G3DSA:3.40.50.360 1 189 1.0E-34 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS03555 c0784b6e2f5856e36fbb580c7e2c1111 189 SUPERFAMILY SSF52218 1 188 2.36E-45 T 28-03-2018 IPR029039 Flavoprotein-like domain APY29_RS11645 b4ebff5c64d1cb2de28c8ac3697adb75 146 Gene3D G3DSA:2.40.50.140 2 118 2.8E-23 T 28-03-2018 APY29_RS11645 b4ebff5c64d1cb2de28c8ac3697adb75 146 SUPERFAMILY SSF50249 3 134 4.11E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold APY29_RS11645 b4ebff5c64d1cb2de28c8ac3697adb75 146 Pfam PF00436 Single-strand binding protein family 9 109 2.9E-12 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 APY29_RS11645 b4ebff5c64d1cb2de28c8ac3697adb75 146 PIRSF PIRSF002070 1 146 3.8E-24 T 28-03-2018 APY29_RS15275 5a23561890273b7695df4477325692b9 432 Gene3D G3DSA:2.40.50.100 270 393 4.5E-4 T 28-03-2018 APY29_RS15275 5a23561890273b7695df4477325692b9 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 89 109 2.3E-10 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APY29_RS15275 5a23561890273b7695df4477325692b9 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 410 430 2.3E-10 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APY29_RS15275 5a23561890273b7695df4477325692b9 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 318 342 2.3E-10 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APY29_RS15275 5a23561890273b7695df4477325692b9 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 395 410 2.3E-10 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APY29_RS15275 5a23561890273b7695df4477325692b9 432 Pfam PF13437 HlyD family secretion protein 273 397 7.8E-10 T 28-03-2018 APY29_RS15275 5a23561890273b7695df4477325692b9 432 Gene3D G3DSA:2.40.50.100 77 269 1.1E-7 T 28-03-2018 APY29_RS02810 4767760558bfaeb50d52e6a1604f53b5 65 Pfam PF14255 Cysteine-rich CPXCG 10 59 2.7E-22 T 28-03-2018 IPR025990 Cysteine-rich CPXCG protein APY29_RS02810 4767760558bfaeb50d52e6a1604f53b5 65 PIRSF PIRSF037225 2 65 1.2E-29 T 28-03-2018 IPR017143 Uncharacterised conserved protein UCP037225 APY29_RS08395 4a476f7a253930125bf9fdb7df1abd24 446 Gene3D G3DSA:1.10.3860.10 1 423 5.3E-110 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS08395 4a476f7a253930125bf9fdb7df1abd24 446 Pfam PF00375 Sodium:dicarboxylate symporter family 13 415 1.1E-112 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS08395 4a476f7a253930125bf9fdb7df1abd24 446 SUPERFAMILY SSF118215 12 415 1.29E-102 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS08395 4a476f7a253930125bf9fdb7df1abd24 446 PRINTS PR00173 Glutamate-aspartate symporter signature 370 390 4.2E-20 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS08395 4a476f7a253930125bf9fdb7df1abd24 446 PRINTS PR00173 Glutamate-aspartate symporter signature 206 225 4.2E-20 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS08395 4a476f7a253930125bf9fdb7df1abd24 446 PRINTS PR00173 Glutamate-aspartate symporter signature 308 334 4.2E-20 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS08395 4a476f7a253930125bf9fdb7df1abd24 446 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 4.2E-20 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS08395 4a476f7a253930125bf9fdb7df1abd24 446 PRINTS PR00173 Glutamate-aspartate symporter signature 343 362 4.2E-20 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS08395 4a476f7a253930125bf9fdb7df1abd24 446 PRINTS PR00173 Glutamate-aspartate symporter signature 159 181 4.2E-20 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS08395 4a476f7a253930125bf9fdb7df1abd24 446 PRINTS PR00173 Glutamate-aspartate symporter signature 10 30 4.2E-20 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APY29_RS16780 c85bb41d1726c9b6a36d9c57b751571b 289 SUPERFAMILY SSF117892 96 224 6.8E-13 T 28-03-2018 IPR001107 Band 7 domain APY29_RS16780 c85bb41d1726c9b6a36d9c57b751571b 289 Pfam PF01145 SPFH domain / Band 7 family 62 231 2.5E-25 T 28-03-2018 IPR001107 Band 7 domain APY29_RS16780 c85bb41d1726c9b6a36d9c57b751571b 289 SMART SM00244 58 222 2.4E-10 T 28-03-2018 IPR001107 Band 7 domain APY29_RS14820 5be06d5b1de6bac366b4593bd3dff1cd 175 SUPERFAMILY SSF53474 4 172 1.62E-21 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS14820 5be06d5b1de6bac366b4593bd3dff1cd 175 Gene3D G3DSA:3.40.50.1820 2 175 7.8E-18 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS13035 f40cec911e9087bd5c97e50336098e8d 242 Pfam PF13643 Domain of unknown function (DUF4145) 133 207 1.4E-11 T 28-03-2018 IPR025285 Domain of unknown function DUF4145 APY29_RS04335 e4876e4e4f81e3a6f39bf29a8880f8f2 151 Gene3D G3DSA:3.40.50.10220 85 145 6.3E-5 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS04335 e4876e4e4f81e3a6f39bf29a8880f8f2 151 SUPERFAMILY SSF102220 110 143 8.76E-5 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APY29_RS06360 a39ddc7ffc6d713839a3bd736b00ffc4 149 TIGRFAM TIGR02801 tolR: protein TolR 14 138 4.0E-40 T 28-03-2018 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 APY29_RS06360 a39ddc7ffc6d713839a3bd736b00ffc4 149 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 138 1.4E-27 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APY29_RS18805 085c42b4b3b8bdbff1045cc57da8076f 210 SUPERFAMILY SSF144064 19 182 3.14E-29 T 28-03-2018 APY29_RS18805 085c42b4b3b8bdbff1045cc57da8076f 210 Gene3D G3DSA:3.40.1570.10 13 109 2.7E-9 T 28-03-2018 APY29_RS07045 357453a827c714a6b78f8fe53ba27e82 134 Pfam PF03994 Domain of Unknown Function (DUF350) 80 132 5.7E-10 T 28-03-2018 IPR007140 Protein of unknown function DUF350 APY29_RS07045 357453a827c714a6b78f8fe53ba27e82 134 Pfam PF03994 Domain of Unknown Function (DUF350) 15 68 1.2E-13 T 28-03-2018 IPR007140 Protein of unknown function DUF350 APY29_RS02460 832be0e063515448ca64e461b5bb6a4d 178 Gene3D G3DSA:3.90.1200.10 7 167 6.7E-16 T 28-03-2018 APY29_RS02460 832be0e063515448ca64e461b5bb6a4d 178 Pfam PF01636 Phosphotransferase enzyme family 24 109 2.0E-5 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase APY29_RS02460 832be0e063515448ca64e461b5bb6a4d 178 SUPERFAMILY SSF56112 9 122 9.7E-18 T 28-03-2018 IPR011009 Protein kinase-like domain APY29_RS03000 add90372962184609dc06b26936eabac 458 Pfam PF01554 MatE 27 185 3.1E-24 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 APY29_RS03000 add90372962184609dc06b26936eabac 458 Pfam PF01554 MatE 253 412 1.5E-29 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 APY29_RS03000 add90372962184609dc06b26936eabac 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 27 427 1.2E-77 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 APY29_RS14785 5a354ce99d3ffa70e6fd87ca354f2ecc 183 Pfam PF11159 Protein of unknown function (DUF2939) 13 104 4.5E-26 T 28-03-2018 IPR021330 Protein of unknown function DUF2939 APY29_RS09200 91cbf69ef9cde1f45c40b735e6e983b2 263 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 80 244 2.6E-51 T 28-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 APY29_RS09200 91cbf69ef9cde1f45c40b735e6e983b2 263 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 79 245 1.0E-31 T 28-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 APY29_RS02215 8b356094e5e6e43128c90da5423c3a2f 371 Gene3D G3DSA:3.40.50.1820 38 362 8.1E-39 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS02215 8b356094e5e6e43128c90da5423c3a2f 371 Pfam PF12697 Alpha/beta hydrolase family 112 322 1.4E-15 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 APY29_RS02215 8b356094e5e6e43128c90da5423c3a2f 371 SUPERFAMILY SSF53474 101 342 4.05E-38 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS06235 dfa358c6a5092330299f1472b6a9bcef 141 Gene3D G3DSA:3.10.180.10 9 30 0.046 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS06235 dfa358c6a5092330299f1472b6a9bcef 141 Gene3D G3DSA:3.10.180.10 31 139 1.1E-14 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS06235 dfa358c6a5092330299f1472b6a9bcef 141 SUPERFAMILY SSF54593 12 129 5.91E-20 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS06235 dfa358c6a5092330299f1472b6a9bcef 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 123 5.6E-10 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APY29_RS01545 f05669db743f5cf85c34954c322fd2bd 2375 Pfam PF05860 haemagglutination activity domain 46 154 8.4E-19 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal APY29_RS01545 f05669db743f5cf85c34954c322fd2bd 2375 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 77 151 3.2E-23 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal APY29_RS01545 f05669db743f5cf85c34954c322fd2bd 2375 Gene3D G3DSA:2.160.20.10 37 326 6.1E-43 T 28-03-2018 IPR012334 Pectin lyase fold APY29_RS01545 f05669db743f5cf85c34954c322fd2bd 2375 SMART SM00912 42 155 1.5E-27 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal APY29_RS01545 f05669db743f5cf85c34954c322fd2bd 2375 SUPERFAMILY SSF51126 45 324 2.92E-30 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor APY29_RS16235 3ce34102404f06ef21893abc846be21d 403 SUPERFAMILY SSF51445 13 373 4.65E-82 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily APY29_RS16235 3ce34102404f06ef21893abc846be21d 403 Gene3D G3DSA:3.20.20.80 28 371 1.5E-53 T 28-03-2018 APY29_RS16235 3ce34102404f06ef21893abc846be21d 403 Pfam PF07745 Glycosyl hydrolase family 53 32 368 2.1E-115 T 28-03-2018 IPR011683 Glycosyl hydrolase family 53 GO:0015926 APY29_RS21640 08c402fa6c67ff0435686c1c93dfa47f 437 Pfam PF00860 Permease family 17 399 1.0E-46 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APY29_RS21640 08c402fa6c67ff0435686c1c93dfa47f 437 PIRSF PIRSF005353 4 437 1.9E-164 T 28-03-2018 IPR026033 Purine permease PbuG-like APY29_RS08650 40a4d9979b93d2765e8f892b38c0a1c3 135 SUPERFAMILY SSF54593 18 129 6.33E-19 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS08650 40a4d9979b93d2765e8f892b38c0a1c3 135 Gene3D G3DSA:3.10.180.10 18 135 2.5E-15 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS08650 40a4d9979b93d2765e8f892b38c0a1c3 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 19 123 9.2E-5 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APY29_RS09550 63fd905968c0677a150b586c704714b3 160 SUPERFAMILY SSF53448 1 116 2.06E-7 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS22340 1aac1c8e5e13b953ad084be838cd26d0 281 SMART SM00382 45 250 9.8E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain APY29_RS22340 1aac1c8e5e13b953ad084be838cd26d0 281 Pfam PF00005 ABC transporter 36 193 1.4E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APY29_RS22340 1aac1c8e5e13b953ad084be838cd26d0 281 SUPERFAMILY SSF52540 16 257 5.63E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS22340 1aac1c8e5e13b953ad084be838cd26d0 281 Gene3D G3DSA:3.40.50.300 2 264 7.3E-49 T 28-03-2018 APY29_RS22415 af7b455acc59f87baa86905fe55a22cf 427 PIRSF PIRSF006066 1 427 5.8E-140 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 APY29_RS22415 af7b455acc59f87baa86905fe55a22cf 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 417 5.5E-104 T 28-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APY29_RS22415 af7b455acc59f87baa86905fe55a22cf 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 2.5E-121 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 APY29_RS03130 59b68d39cecd107950502ca85bdcfaa2 304 PIRSF PIRSF026649 1 295 1.2E-76 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APY29_RS03130 59b68d39cecd107950502ca85bdcfaa2 304 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 284 1.7E-45 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APY29_RS11155 d6a53411aacf4b99ff4e4164eb66eed9 220 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 188 1.1E-30 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APY29_RS09895 ded5efb0fab9c9c75750a14d8b6e4eea 419 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 290 393 3.6E-38 T 28-03-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 APY29_RS09895 ded5efb0fab9c9c75750a14d8b6e4eea 419 PIRSF PIRSF038885 5 419 9.8E-156 T 28-03-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 APY29_RS09895 ded5efb0fab9c9c75750a14d8b6e4eea 419 Pfam PF00033 Cytochrome b/b6/petB 32 220 3.9E-68 T 28-03-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 APY29_RS09895 ded5efb0fab9c9c75750a14d8b6e4eea 419 SUPERFAMILY SSF81648 294 410 2.03E-31 T 28-03-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 APY29_RS09895 ded5efb0fab9c9c75750a14d8b6e4eea 419 SUPERFAMILY SSF81342 24 292 2.51E-95 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 APY29_RS09895 ded5efb0fab9c9c75750a14d8b6e4eea 419 Gene3D G3DSA:1.20.810.10 16 415 2.3E-157 T 28-03-2018 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 APY29_RS01630 8eb8320f7c9334ba6c4d6f3af7be78e2 249 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 65 192 7.5E-35 T 28-03-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 APY29_RS01630 8eb8320f7c9334ba6c4d6f3af7be78e2 249 Pfam PF01553 Acyltransferase 67 192 2.8E-29 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APY29_RS01630 8eb8320f7c9334ba6c4d6f3af7be78e2 249 SUPERFAMILY SSF69593 11 245 1.44E-55 T 28-03-2018 APY29_RS01630 8eb8320f7c9334ba6c4d6f3af7be78e2 249 Gene3D G3DSA:3.40.1130.10 35 249 3.3E-48 T 28-03-2018 APY29_RS01630 8eb8320f7c9334ba6c4d6f3af7be78e2 249 SMART SM00563 81 195 1.6E-38 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APY29_RS21560 81fbae0fd3fff283c5230ecd54f0e080 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 337 3.7E-63 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 APY29_RS21560 81fbae0fd3fff283c5230ecd54f0e080 365 Gene3D G3DSA:3.20.20.70 1 358 9.5E-112 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS21560 81fbae0fd3fff283c5230ecd54f0e080 365 SUPERFAMILY SSF51395 2 358 3.66E-108 T 28-03-2018 APY29_RS13850 458590263554faf1c217eaa1d90c5bf7 210 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 126 139 - T 28-03-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 APY29_RS13850 458590263554faf1c217eaa1d90c5bf7 210 Gene3D G3DSA:3.20.20.70 12 209 9.8E-36 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS13850 458590263554faf1c217eaa1d90c5bf7 210 Pfam PF01081 KDPG and KHG aldolase 13 184 2.3E-23 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 APY29_RS13850 458590263554faf1c217eaa1d90c5bf7 210 SUPERFAMILY SSF51569 9 208 7.87E-52 T 28-03-2018 APY29_RS20145 7431bca1f581d19ce53654f22af756f4 195 Gene3D G3DSA:3.30.70.1290 1 93 8.4E-24 T 28-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 APY29_RS20145 7431bca1f581d19ce53654f22af756f4 195 SMART SM01321 1 85 8.2E-21 T 28-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 APY29_RS20145 7431bca1f581d19ce53654f22af756f4 195 Pfam PF01797 Transposase IS200 like 2 83 2.2E-12 T 28-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 APY29_RS20145 7431bca1f581d19ce53654f22af756f4 195 SUPERFAMILY SSF143422 2 88 7.32E-24 T 28-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 APY29_RS04800 d8e3be3cad07d14fe525bbdd7eec9b76 439 Gene3D G3DSA:1.20.1250.20 4 225 4.3E-16 T 28-03-2018 APY29_RS04800 d8e3be3cad07d14fe525bbdd7eec9b76 439 Gene3D G3DSA:1.20.1250.20 226 439 1.2E-21 T 28-03-2018 APY29_RS04800 d8e3be3cad07d14fe525bbdd7eec9b76 439 Pfam PF07690 Major Facilitator Superfamily 20 391 2.5E-21 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS04800 d8e3be3cad07d14fe525bbdd7eec9b76 439 SUPERFAMILY SSF103473 13 434 1.96E-37 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS05280 7bf1a3b7ae9658c701f3a3bc981e0f9c 286 Pfam PF08340 Domain of unknown function (DUF1732) 202 286 4.8E-35 T 28-03-2018 IPR013551 Domain of unknown function DUF1732 APY29_RS05280 7bf1a3b7ae9658c701f3a3bc981e0f9c 286 Pfam PF03755 YicC-like family, N-terminal region 2 152 2.5E-33 T 28-03-2018 IPR013527 YicC-like, N-terminal APY29_RS05280 7bf1a3b7ae9658c701f3a3bc981e0f9c 286 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 286 3.1E-79 T 28-03-2018 IPR005229 Conserved hypothetical protein CHP00255 APY29_RS14675 e79f14cfab02315ffcf99b18fa0725a4 211 SUPERFAMILY SSF50475 9 186 4.21E-28 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 APY29_RS14675 e79f14cfab02315ffcf99b18fa0725a4 211 Pfam PF04299 Putative FMN-binding domain 1 159 5.6E-38 T 28-03-2018 IPR007396 Transcriptional regulator PAI 2-type APY29_RS14675 e79f14cfab02315ffcf99b18fa0725a4 211 PIRSF PIRSF010372 1 207 4.1E-45 T 28-03-2018 IPR007396 Transcriptional regulator PAI 2-type APY29_RS14675 e79f14cfab02315ffcf99b18fa0725a4 211 Gene3D G3DSA:2.30.110.10 1 205 4.5E-47 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 APY29_RS14450 fa67f21a9fb005d8977f576ae7e8bfe9 201 Pfam PF04343 Protein of unknown function, DUF488 35 156 1.3E-28 T 28-03-2018 IPR007438 Protein of unknown function DUF488 APY29_RS14450 fa67f21a9fb005d8977f576ae7e8bfe9 201 PIRSF PIRSF024492 21 201 2.4E-75 T 28-03-2018 IPR014519 Uncharacterised conserved protein UCP024492 APY29_RS08930 7e9ac2af44db9c2d0cc1d420cfb348a3 1248 Gene3D G3DSA:3.40.50.410 42 580 1.1E-30 T 28-03-2018 IPR002035 von Willebrand factor, type A APY29_RS08930 7e9ac2af44db9c2d0cc1d420cfb348a3 1248 Pfam PF05567 Neisseria PilC beta-propeller domain 715 1087 1.0E-38 T 28-03-2018 IPR008707 PilC beta-propeller domain APY29_RS23750 042beb7c910aec7ac1ce6bd95015142f 78 SUPERFAMILY SSF47598 1 77 1.96E-17 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 APY29_RS23750 042beb7c910aec7ac1ce6bd95015142f 78 Gene3D G3DSA:1.10.1220.10 1 78 3.6E-20 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APY29_RS23750 042beb7c910aec7ac1ce6bd95015142f 78 Pfam PF09274 ParG 35 71 4.6E-5 T 28-03-2018 IPR015354 DNA partition complex, ParG APY29_RS08180 08ebd1120080747aff181940d71932a7 132 SUPERFAMILY SSF51316 13 127 1.67E-14 T 28-03-2018 IPR011057 Mss4-like APY29_RS08180 08ebd1120080747aff181940d71932a7 132 Gene3D G3DSA:3.90.1590.10 4 129 2.7E-14 T 28-03-2018 APY29_RS04210 fd13990e9b0434cd47437419ae9d020e 138 Pfam PF04138 GtrA-like protein 19 131 2.2E-20 T 28-03-2018 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 APY29_RS18045 ba6e358bf3f043afa6ade55e87981f72 99 Gene3D G3DSA:3.30.70.330 6 99 1.2E-27 T 28-03-2018 APY29_RS18045 ba6e358bf3f043afa6ade55e87981f72 99 SUPERFAMILY SSF54189 6 97 4.68E-28 T 28-03-2018 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 APY29_RS18045 ba6e358bf3f043afa6ade55e87981f72 99 Pfam PF00276 Ribosomal protein L23 10 95 1.5E-28 T 28-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 APY29_RS18045 ba6e358bf3f043afa6ade55e87981f72 99 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 21.941 T 28-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 APY29_RS09745 51a005f3a96aceace89359e260a516dd 426 Pfam PF00083 Sugar (and other) transporter 19 226 5.0E-20 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APY29_RS09745 51a005f3a96aceace89359e260a516dd 426 Gene3D G3DSA:1.20.1250.20 11 230 5.1E-20 T 28-03-2018 APY29_RS09745 51a005f3a96aceace89359e260a516dd 426 Gene3D G3DSA:1.20.1250.20 239 426 4.6E-21 T 28-03-2018 APY29_RS09745 51a005f3a96aceace89359e260a516dd 426 SUPERFAMILY SSF103473 9 426 7.98E-59 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS09745 51a005f3a96aceace89359e260a516dd 426 Pfam PF07690 Major Facilitator Superfamily 252 419 3.3E-9 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS09630 745bab463dbe79b5163275e4646cb567 378 Pfam PF04966 Carbohydrate-selective porin, OprB family 9 377 5.4E-88 T 28-03-2018 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 APY29_RS08995 f99830c61782140acef4c84525580bab 280 SUPERFAMILY SSF53955 15 39 1.13E-11 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS08995 f99830c61782140acef4c84525580bab 280 SUPERFAMILY SSF53955 67 141 1.13E-11 T 28-03-2018 IPR023346 Lysozyme-like domain APY29_RS08995 f99830c61782140acef4c84525580bab 280 Gene3D G3DSA:1.10.530.10 12 244 1.2E-11 T 28-03-2018 APY29_RS08995 f99830c61782140acef4c84525580bab 280 Pfam PF01464 Transglycosylase SLT domain 18 137 1.8E-9 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 APY29_RS03195 fed0afd6091af5d0a6e7b5eef731f221 682 Gene3D G3DSA:3.40.720.10 406 611 0.03 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APY29_RS03195 fed0afd6091af5d0a6e7b5eef731f221 682 SUPERFAMILY SSF53649 415 673 1.93E-8 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APY29_RS03195 fed0afd6091af5d0a6e7b5eef731f221 682 Pfam PF08665 PglZ domain 416 587 3.5E-26 T 28-03-2018 IPR013973 PglZ domain APY29_RS13075 7890790873e6c37efddad0ba1e05f64c 424 SUPERFAMILY SSF50341 287 424 7.19E-31 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS13075 7890790873e6c37efddad0ba1e05f64c 424 SMART SM00260 285 423 9.6E-23 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS13075 7890790873e6c37efddad0ba1e05f64c 424 Gene3D G3DSA:2.30.30.40 370 417 1.1E-11 T 28-03-2018 APY29_RS13075 7890790873e6c37efddad0ba1e05f64c 424 Pfam PF01584 CheW-like domain 291 423 2.9E-30 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APY29_RS13075 7890790873e6c37efddad0ba1e05f64c 424 Gene3D G3DSA:2.40.50.180 306 369 5.9E-17 T 28-03-2018 APY29_RS07340 d5232cb501b7af76f7b99618658616b7 227 Pfam PF11306 Protein of unknown function (DUF3108) 12 216 7.6E-20 T 28-03-2018 IPR021457 Protein of unknown function DUF3108 APY29_RS22215 572678f9f2f8a33398f8896723ea2d6b 297 Pfam PF14302 Domain of unknown function (DUF4377) 190 267 2.9E-13 T 28-03-2018 IPR025485 Domain of unknown function DUF4377 APY29_RS22215 572678f9f2f8a33398f8896723ea2d6b 297 Pfam PF03724 META domain 53 169 6.6E-16 T 28-03-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ APY29_RS05265 3699ae1d7493cac89f5b242b31e0c400 207 SUPERFAMILY SSF52972 7 202 8.37E-70 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like APY29_RS05265 3699ae1d7493cac89f5b242b31e0c400 207 Pfam PF01725 Ham1 family 12 199 2.7E-51 T 28-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 APY29_RS05265 3699ae1d7493cac89f5b242b31e0c400 207 Gene3D G3DSA:3.90.950.10 2 207 1.0E-72 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like APY29_RS05265 3699ae1d7493cac89f5b242b31e0c400 207 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 10 204 50.187 T 28-03-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 APY29_RS05265 3699ae1d7493cac89f5b242b31e0c400 207 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 12 202 8.1E-53 T 28-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 APY29_RS11305 ec953d756493e7761627dad6b36c6ff8 173 Pfam PF13827 Domain of unknown function (DUF4189) 64 165 7.9E-19 T 28-03-2018 IPR025240 Domain of unknown function DUF4189 APY29_RS05780 a5852702e155660ae396cda2781458f6 519 Gene3D G3DSA:1.10.443.10 303 487 3.1E-20 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS05780 a5852702e155660ae396cda2781458f6 519 Pfam PF00589 Phage integrase family 325 482 1.9E-10 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APY29_RS05780 a5852702e155660ae396cda2781458f6 519 Gene3D G3DSA:1.10.150.130 163 302 1.3E-9 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal APY29_RS05780 a5852702e155660ae396cda2781458f6 519 SUPERFAMILY SSF56349 173 226 7.95E-33 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APY29_RS05780 a5852702e155660ae396cda2781458f6 519 SUPERFAMILY SSF56349 256 487 7.95E-33 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APY29_RS18050 6ae023041327c34768382c64b37fcccc 201 SUPERFAMILY SSF52166 10 200 2.49E-61 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 APY29_RS18050 6ae023041327c34768382c64b37fcccc 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 198 5.4E-64 T 28-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS18050 6ae023041327c34768382c64b37fcccc 201 Gene3D G3DSA:3.40.1370.10 6 139 4.8E-38 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 APY29_RS18050 6ae023041327c34768382c64b37fcccc 201 Gene3D G3DSA:3.40.1370.10 140 199 1.0E-12 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 APY29_RS18050 6ae023041327c34768382c64b37fcccc 201 Pfam PF00573 Ribosomal protein L4/L1 family 12 198 9.7E-55 T 28-03-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 APY29_RS18050 6ae023041327c34768382c64b37fcccc 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 201 29.219 T 28-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APY29_RS02145 6e82e98ff6314501d8ce69763f05f4a4 305 Gene3D G3DSA:3.40.50.720 38 293 4.2E-4 T 28-03-2018 APY29_RS22675 455e13b3b5ae336657fa3b3c9033d4b5 482 Pfam PF00202 Aminotransferase class-III 75 404 3.0E-50 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APY29_RS22675 455e13b3b5ae336657fa3b3c9033d4b5 482 SUPERFAMILY SSF53383 49 479 2.54E-88 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase APY29_RS22675 455e13b3b5ae336657fa3b3c9033d4b5 482 Gene3D G3DSA:3.90.1150.10 30 219 5.8E-36 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS22675 455e13b3b5ae336657fa3b3c9033d4b5 482 Gene3D G3DSA:3.90.1150.10 362 482 0.048 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 APY29_RS22675 455e13b3b5ae336657fa3b3c9033d4b5 482 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 278 314 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APY29_RS22675 455e13b3b5ae336657fa3b3c9033d4b5 482 Gene3D G3DSA:3.40.640.10 220 361 5.3E-38 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APY29_RS15785 8e05b4432768bedc7cb601003486a9df 224 Pfam PF04367 Protein of unknown function (DUF502) 80 180 4.3E-27 T 28-03-2018 IPR007462 Protein of unknown function DUF502 APY29_RS07590 37f02d84a880cbe2c1985f164f613b57 199 Pfam PF05433 Glycine zipper 2TM domain 99 137 2.7E-7 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 APY29_RS19095 468672f2a9634f3a3acd2a8a3c487f0e 73 Pfam PF07362 Post-segregation antitoxin CcdA 14 73 1.1E-12 T 28-03-2018 IPR009956 Post-segregation antitoxin CcdA APY29_RS06175 e82630ad582ee9307e82e3a3cdce24ba 600 Pfam PF04183 IucA / IucC family 160 375 1.2E-34 T 28-03-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 APY29_RS06175 e82630ad582ee9307e82e3a3cdce24ba 600 Pfam PF06276 Ferric iron reductase FhuF-like transporter 398 553 2.9E-19 T 28-03-2018 IPR022770 Ferric iron reductase FhuF domain APY29_RS18790 31952312deb5dc9e4fb66e36cb19e024 294 SUPERFAMILY SSF161098 88 275 3.14E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS18790 31952312deb5dc9e4fb66e36cb19e024 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 277 8.9E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APY29_RS18790 31952312deb5dc9e4fb66e36cb19e024 294 Gene3D G3DSA:1.10.3720.10 31 290 1.6E-22 T 28-03-2018 APY29_RS04195 bb857b09105a057f8f5b71a683bf860f 193 Pfam PF05598 Transposase domain (DUF772) 87 161 2.5E-18 T 28-03-2018 IPR008490 Transposase InsH, N-terminal APY29_RS07075 ef27912cc5e420fc8672b0f2f122dbb2 312 Pfam PF07690 Major Facilitator Superfamily 37 310 7.6E-24 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS07075 ef27912cc5e420fc8672b0f2f122dbb2 312 Gene3D G3DSA:1.20.1250.20 26 217 9.1E-26 T 28-03-2018 APY29_RS07075 ef27912cc5e420fc8672b0f2f122dbb2 312 SUPERFAMILY SSF103473 23 203 3.53E-29 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS05095 d7bd66783bb15ccc784ddc2e8376832f 294 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 12 267 7.0E-39 T 28-03-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 APY29_RS06710 35bb557f7c1c0015ecc1587cc7e2f45a 274 Gene3D G3DSA:3.90.70.10 2 133 2.9E-41 T 28-03-2018 APY29_RS06710 35bb557f7c1c0015ecc1587cc7e2f45a 274 Gene3D G3DSA:1.20.1560.10 134 274 1.1E-15 T 28-03-2018 APY29_RS06710 35bb557f7c1c0015ecc1587cc7e2f45a 274 Pfam PF00664 ABC transporter transmembrane region 160 271 1.5E-10 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS06710 35bb557f7c1c0015ecc1587cc7e2f45a 274 SUPERFAMILY SSF90123 143 272 6.8E-22 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APY29_RS06710 35bb557f7c1c0015ecc1587cc7e2f45a 274 Pfam PF03412 Peptidase C39 family 2 129 1.2E-36 T 28-03-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 APY29_RS17710 b36f71a9005467c26366132327c24188 417 SUPERFAMILY SSF55486 200 388 5.81E-16 T 28-03-2018 APY29_RS17710 b36f71a9005467c26366132327c24188 417 Pfam PF13688 Metallo-peptidase family M12 201 383 6.0E-27 T 28-03-2018 APY29_RS17710 b36f71a9005467c26366132327c24188 417 Gene3D G3DSA:3.40.390.10 186 389 5.4E-14 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APY29_RS04385 56155ec0e5123b1253989a5a4910c02f 368 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 8 365 6.7E-117 T 28-03-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 APY29_RS04385 56155ec0e5123b1253989a5a4910c02f 368 Pfam PF03739 Predicted permease YjgP/YjgQ family 10 365 1.6E-71 T 28-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 APY29_RS06635 c156d3b7b3df31c71e4f8d17b76b8f45 354 SUPERFAMILY SSF56235 48 338 3.09E-85 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APY29_RS06635 c156d3b7b3df31c71e4f8d17b76b8f45 354 Pfam PF01112 Asparaginase 59 337 6.5E-80 T 28-03-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 APY29_RS06635 c156d3b7b3df31c71e4f8d17b76b8f45 354 Gene3D G3DSA:3.60.20.30 208 345 5.1E-39 T 28-03-2018 APY29_RS14945 2584c9540f62aa0088474b27ee176487 157 Gene3D G3DSA:3.90.1590.10 1 155 4.8E-33 T 28-03-2018 APY29_RS14945 2584c9540f62aa0088474b27ee176487 157 SUPERFAMILY SSF51316 6 127 3.14E-40 T 28-03-2018 IPR011057 Mss4-like APY29_RS14945 2584c9540f62aa0088474b27ee176487 157 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 29 108 7.1E-19 T 28-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 APY29_RS07055 b14550519019409de11108f6a41d8a24 388 SUPERFAMILY SSF52440 175 280 2.88E-36 T 28-03-2018 IPR016185 Pre-ATP-grasp domain APY29_RS07055 b14550519019409de11108f6a41d8a24 388 SUPERFAMILY SSF56059 1 169 3.46E-82 T 28-03-2018 APY29_RS07055 b14550519019409de11108f6a41d8a24 388 SUPERFAMILY SSF56059 268 385 3.46E-82 T 28-03-2018 APY29_RS07055 b14550519019409de11108f6a41d8a24 388 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 386 5.6E-146 T 28-03-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain APY29_RS21970 d97b0065906bd7cc99c19046188b45f6 311 Pfam PF01112 Asparaginase 1 305 2.5E-120 T 28-03-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 APY29_RS21970 d97b0065906bd7cc99c19046188b45f6 311 Gene3D G3DSA:3.60.20.30 175 311 6.8E-51 T 28-03-2018 APY29_RS21970 d97b0065906bd7cc99c19046188b45f6 311 SUPERFAMILY SSF56235 2 305 1.05E-95 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APY29_RS15980 fbeeeeb52c1f43b0df32310d3a73685c 197 Pfam PF00924 Mechanosensitive ion channel 72 185 2.2E-14 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APY29_RS15980 fbeeeeb52c1f43b0df32310d3a73685c 197 SUPERFAMILY SSF50182 115 188 5.23E-9 T 28-03-2018 IPR010920 LSM domain APY29_RS15980 fbeeeeb52c1f43b0df32310d3a73685c 197 Gene3D G3DSA:2.30.30.60 130 188 2.7E-13 T 28-03-2018 APY29_RS16505 44b608f8d6f6a760d9f7bd3e8b07a5ce 128 Pfam PF05656 Protein of unknown function (DUF805) 11 126 1.3E-34 T 28-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 APY29_RS16505 44b608f8d6f6a760d9f7bd3e8b07a5ce 128 Gene3D G3DSA:1.20.1250.20 9 128 3.3E-5 T 28-03-2018 APY29_RS21985 1b70a5c61c21afd04f9b702991e670dd 192 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 116 173 3.5E-17 T 28-03-2018 IPR018637 Domain of unknown function DUF2059 APY29_RS11090 f56c5bc94c4a3e0e9c4c9a4185b70063 290 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 163 227 7.0E-21 T 28-03-2018 IPR017703 YgfZ/GcvT conserved site APY29_RS11090 f56c5bc94c4a3e0e9c4c9a4185b70063 290 SUPERFAMILY SSF103025 11 218 1.88E-43 T 28-03-2018 APY29_RS11090 f56c5bc94c4a3e0e9c4c9a4185b70063 290 Gene3D G3DSA:3.30.70.1400 18 215 4.6E-21 T 28-03-2018 APY29_RS11090 f56c5bc94c4a3e0e9c4c9a4185b70063 290 Pfam PF01571 Aminomethyltransferase folate-binding domain 18 95 1.6E-6 T 28-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal APY29_RS11090 f56c5bc94c4a3e0e9c4c9a4185b70063 290 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 202 275 6.6E-6 T 28-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APY29_RS08965 5dbe5afe74397d52d294dfb70d93ffb2 557 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 122 550 5.1E-111 T 28-03-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 APY29_RS08965 5dbe5afe74397d52d294dfb70d93ffb2 557 Gene3D G3DSA:3.40.50.300 84 546 7.6E-41 T 28-03-2018 APY29_RS08965 5dbe5afe74397d52d294dfb70d93ffb2 557 SUPERFAMILY SSF52540 84 543 2.07E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APY29_RS00595 059b0e5944992b121d587bcf76824165 416 Pfam PF07730 Histidine kinase 231 293 6.0E-12 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 APY29_RS00595 059b0e5944992b121d587bcf76824165 416 Gene3D G3DSA:3.30.565.10 283 416 3.6E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS00595 059b0e5944992b121d587bcf76824165 416 SUPERFAMILY SSF55874 299 415 1.11E-12 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain APY29_RS23590 87bf9c8b0ae94f728c75b6e45eb0b4f8 179 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 8 160 2.0E-44 T 28-03-2018 IPR012912 Plasmid pRiA4b, Orf3 APY29_RS23590 87bf9c8b0ae94f728c75b6e45eb0b4f8 179 SUPERFAMILY SSF159941 6 162 5.1E-48 T 28-03-2018 IPR024047 Protein MM3350-like domain APY29_RS23590 87bf9c8b0ae94f728c75b6e45eb0b4f8 179 Gene3D G3DSA:3.10.290.30 1 60 2.7E-13 T 28-03-2018 IPR024047 Protein MM3350-like domain APY29_RS23590 87bf9c8b0ae94f728c75b6e45eb0b4f8 179 Gene3D G3DSA:3.10.290.30 61 164 3.3E-31 T 28-03-2018 IPR024047 Protein MM3350-like domain APY29_RS12390 d5347c65baca43014fe17e9b7a0d3733 300 Pfam PF12183 Restriction endonuclease NotI 7 254 5.5E-62 T 28-03-2018 IPR022009 Restriction endonuclease, type II, NotI APY29_RS14175 06fb46f8cdf6945bd6b97ce28b2049e2 352 Gene3D G3DSA:3.40.50.300 163 351 3.5E-12 T 28-03-2018 APY29_RS14175 06fb46f8cdf6945bd6b97ce28b2049e2 352 SUPERFAMILY SSF53795 165 211 5.19E-9 T 28-03-2018 APY29_RS12870 0db47f056cb5c953c498661544172123 151 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 138 4.8E-28 T 28-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 APY29_RS12870 0db47f056cb5c953c498661544172123 151 Pfam PF02050 Flagellar FliJ protein 19 137 4.4E-23 T 28-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 APY29_RS05510 1cd96a1db69d3eb57d4186ccbde24590 156 Gene3D G3DSA:3.30.1450.10 73 154 3.1E-5 T 28-03-2018 APY29_RS09380 d570f878cab2d1ef59c8ddaeb6391463 528 PIRSF PIRSF006060 436 525 40.0 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APY29_RS09380 d570f878cab2d1ef59c8ddaeb6391463 528 PIRSF PIRSF006060 1 465 2.6E-74 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APY29_RS09380 d570f878cab2d1ef59c8ddaeb6391463 528 Pfam PF13520 Amino acid permease 16 424 1.3E-43 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APY29_RS07815 5ece276727342b1606b14fa081ebec0a 117 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 62 112 5.0E-18 T 28-03-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 APY29_RS14375 8211eb55f86de3314ae1fcea480d6231 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 5 51 3.3E-18 T 28-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 APY29_RS14375 8211eb55f86de3314ae1fcea480d6231 68 Pfam PF04995 Heme exporter protein D (CcmD) 8 50 9.7E-15 T 28-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 APY29_RS22295 7cb9ee01ac8f5d4f2c2ddada6157f70b 185 Pfam PF13657 HipA N-terminal domain 6 49 6.4E-5 T 28-03-2018 IPR017508 HipA, N-terminal subdomain 1 APY29_RS22295 7cb9ee01ac8f5d4f2c2ddada6157f70b 185 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 3 46 5.6E-10 T 28-03-2018 IPR017508 HipA, N-terminal subdomain 1 APY29_RS16605 bd401f4c2a35a3d50bd05f836d3d08c6 809 TIGRFAM TIGR04346 DotA_TraY: conjugal transfer/type IV secretion protein DotA/TraY 1 686 4.2E-139 T 28-03-2018 IPR027628 Conjugal transfer/type IV secretion protein DotA/TraY APY29_RS21905 ced922637d04a9a08667748d1be9e6d2 112 TIGRFAM TIGR04509 mod_pep_NH_fam: putative modified peptide 11 102 1.1E-34 T 28-03-2018 IPR030976 Putative modified peptide APY29_RS13390 dafd025ea490fc04b48041f14417ceb4 298 Gene3D G3DSA:3.20.20.70 1 297 1.6E-105 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APY29_RS13390 dafd025ea490fc04b48041f14417ceb4 298 SUPERFAMILY SSF51569 2 285 3.3E-70 T 28-03-2018 APY29_RS13390 dafd025ea490fc04b48041f14417ceb4 298 Pfam PF00682 HMGL-like 5 275 2.5E-52 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 APY29_RS12785 7ca46e3c705ed66c7e05e5e9f6d8d779 73 SUPERFAMILY SSF47336 8 72 4.32E-8 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain APY29_RS12785 7ca46e3c705ed66c7e05e5e9f6d8d779 73 Gene3D G3DSA:1.10.1200.10 4 73 3.3E-6 T 28-03-2018 APY29_RS03215 3d0f64957c37924096c196d8822ee67e 70 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 1 58 2.0E-24 T 28-03-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system APY29_RS03215 3d0f64957c37924096c196d8822ee67e 70 Gene3D G3DSA:1.10.1220.10 4 34 2.6E-4 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APY29_RS15435 74280f529cece727f50c5c206ae2264b 161 Pfam PF04306 Protein of unknown function (DUF456) 23 158 3.5E-41 T 28-03-2018 IPR007403 Protein of unknown function DUF456 APY29_RS23055 2bb297c4eb3669ac448e91cf22cc44d3 368 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 84 7.3E-12 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family APY29_RS03100 bda5380a20f96f8669437e28d044b99d 501 PIRSF PIRSF026631 7 501 1.2E-134 T 28-03-2018 IPR014529 Uncharacterised conserved protein UCP026631 APY29_RS03100 bda5380a20f96f8669437e28d044b99d 501 Pfam PF03703 Bacterial PH domain 70 149 1.6E-19 T 28-03-2018 IPR005182 Domain of unknown function DUF304 APY29_RS03100 bda5380a20f96f8669437e28d044b99d 501 Pfam PF03703 Bacterial PH domain 410 487 1.2E-12 T 28-03-2018 IPR005182 Domain of unknown function DUF304 APY29_RS03100 bda5380a20f96f8669437e28d044b99d 501 Pfam PF03703 Bacterial PH domain 262 336 2.6E-8 T 28-03-2018 IPR005182 Domain of unknown function DUF304 APY29_RS10695 1c8f00a70de4c20d23ce15c8d779324a 310 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 24 308 3.6E-132 T 28-03-2018 IPR026331 Integrating conjugative element protein PFL_4710 APY29_RS10695 1c8f00a70de4c20d23ce15c8d779324a 310 Pfam PF06834 TraU protein 31 298 2.0E-71 T 28-03-2018 IPR009649 TraU APY29_RS04920 0ee80a066d0cd626e43cc2c1e3150fc6 443 Pfam PF04932 O-Antigen ligase 221 372 1.7E-22 T 28-03-2018 IPR007016 O-antigen ligase-related APY29_RS02310 936d0f61ce8f2fc3d7410dd7e8280e15 272 Gene3D G3DSA:1.20.120.20 2 144 2.4E-8 T 28-03-2018 APY29_RS10630 82fa523888b8e96dd24686a26b8f2321 101 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 80 5.1E-9 T 28-03-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 APY29_RS01690 36bad184eac45b7a0ce7216734b88087 273 Pfam PF00535 Glycosyl transferase family 2 13 134 3.9E-19 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 APY29_RS01690 36bad184eac45b7a0ce7216734b88087 273 Gene3D G3DSA:3.90.550.10 2 250 9.0E-27 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS01690 36bad184eac45b7a0ce7216734b88087 273 SUPERFAMILY SSF53448 11 225 1.76E-31 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases APY29_RS08710 7cd3411051fcb86deaf538c2cb16a44b 290 Pfam PF11231 Protein of unknown function (DUF3034) 33 287 3.1E-107 T 28-03-2018 IPR021393 Protein of unknown function DUF3034 APY29_RS22430 f009e57637d19ffb09947f342615e684 273 Gene3D G3DSA:3.90.850.10 10 270 1.1E-21 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APY29_RS22430 f009e57637d19ffb09947f342615e684 273 SUPERFAMILY SSF56529 13 268 2.75E-36 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APY29_RS03080 9cc23ce65d4e58be5e0ec7ef2ec8664d 573 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 63 224 6.0E-17 T 28-03-2018 APY29_RS11325 580959a48362ccf0661e16f8104f87a3 121 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 53 120 3.6E-9 T 28-03-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 APY29_RS13785 3f030181a949a844df12a68b926ea0d0 512 Pfam PF05231 MASE1 2 280 2.3E-35 T 28-03-2018 IPR007895 MASE1 APY29_RS07440 4be06bf21e35ab3c908ff3b94c497fa6 213 Pfam PF16357 Putative PepSY_TM-like 18 213 4.9E-85 T 28-03-2018 IPR032307 Putative PepSY TM-like protein APY29_RS20030 479b7d022fed38e5021ec734f83c5810 294 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 190 254 2.1E-4 T 28-03-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 APY29_RS20030 479b7d022fed38e5021ec734f83c5810 294 SUPERFAMILY SSF53335 85 278 1.89E-24 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS20030 479b7d022fed38e5021ec734f83c5810 294 Gene3D G3DSA:3.40.50.150 123 287 1.8E-18 T 28-03-2018 APY29_RS21265 7d7269b84eb186478d63a656b331df99 137 Gene3D G3DSA:1.20.1290.10 8 137 6.1E-37 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 APY29_RS21265 7d7269b84eb186478d63a656b331df99 137 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 4 124 8.7E-61 T 28-03-2018 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 APY29_RS21265 7d7269b84eb186478d63a656b331df99 137 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 4.9E-26 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APY29_RS21265 7d7269b84eb186478d63a656b331df99 137 SUPERFAMILY SSF69118 2 127 4.45E-38 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 APY29_RS08125 5342fd0a8aceb310912393744f20fd56 421 Pfam PF00999 Sodium/hydrogen exchanger family 17 406 3.7E-55 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APY29_RS08125 5342fd0a8aceb310912393744f20fd56 421 Gene3D G3DSA:1.20.91.10 240 337 1.6E-18 T 28-03-2018 APY29_RS14125 5ca2742703e07914cc75c54f46802fd8 253 Gene3D G3DSA:3.40.50.620 14 208 4.3E-29 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APY29_RS14125 5ca2742703e07914cc75c54f46802fd8 253 Pfam PF02698 DUF218 domain 68 231 3.5E-27 T 28-03-2018 IPR003848 Domain of unknown function DUF218 APY29_RS09170 b68f11fe2930fee52b0b0607b2cbae8f 352 Pfam PF01757 Acyltransferase family 20 333 3.8E-26 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 APY29_RS23085 395e5884d4f36047ef98fdc77f47d431 132 Pfam PF09722 Protein of unknown function (DUF2384) 83 110 8.3E-5 T 28-03-2018 IPR024467 Domain of unknown function DUF2384 APY29_RS18740 85a51f288012577c8f9978aa9827ffca 126 Pfam PF01219 Prokaryotic diacylglycerol kinase 22 121 7.2E-33 T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 APY29_RS18740 85a51f288012577c8f9978aa9827ffca 126 Gene3D G3DSA:1.10.3830.10 11 123 4.5E-38 T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 APY29_RS04330 349da639c6fb01364413c82956b5e401 257 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APY29_RS04330 349da639c6fb01364413c82956b5e401 257 Pfam PF01066 CDP-alcohol phosphatidyltransferase 16 79 1.0E-14 T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APY29_RS04330 349da639c6fb01364413c82956b5e401 257 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 23 192 8.2E-34 T 28-03-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 APY29_RS17050 fd65f42fa5d0887e6841d500d77c9a67 113 Pfam PF07883 Cupin domain 25 94 1.9E-18 T 28-03-2018 IPR013096 Cupin 2, conserved barrel APY29_RS17050 fd65f42fa5d0887e6841d500d77c9a67 113 SUPERFAMILY SSF51182 19 108 2.12E-21 T 28-03-2018 IPR011051 RmlC-like cupin domain APY29_RS17050 fd65f42fa5d0887e6841d500d77c9a67 113 Gene3D G3DSA:2.60.120.10 10 112 8.8E-22 T 28-03-2018 IPR014710 RmlC-like jelly roll fold APY29_RS02725 2e00eec1fc0ef8fcb7b0c16c7ed1ae55 320 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 22 278 4.1E-29 T 28-03-2018 IPR017039 Virulence factor BrkB APY29_RS02725 2e00eec1fc0ef8fcb7b0c16c7ed1ae55 320 Pfam PF03631 Virulence factor BrkB 32 279 1.2E-49 T 28-03-2018 IPR017039 Virulence factor BrkB APY29_RS02725 2e00eec1fc0ef8fcb7b0c16c7ed1ae55 320 PIRSF PIRSF035875 5 296 1.6E-63 T 28-03-2018 IPR017039 Virulence factor BrkB APY29_RS09185 5b7d3138f461d1cf73966420db94c61a 496 Pfam PF13440 Polysaccharide biosynthesis protein 42 334 7.2E-79 T 28-03-2018 APY29_RS00055 88eb381ffa60fa1bb83362393ea04f82 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 135 2.4E-24 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APY29_RS12820 c12b009be5e60277841a0a4d5763111c 89 Gene3D G3DSA:3.40.50.720 34 89 3.3E-6 T 28-03-2018 APY29_RS13910 0479c566a0d751a74bd95f4e6ade43c9 223 Pfam PF06912 Protein of unknown function (DUF1275) 13 204 1.6E-34 T 28-03-2018 IPR010699 Protein of unknown function DUF1275 APY29_RS22485 e54f63204b8fb3946403ed1c18cafa7a 916 Gene3D G3DSA:2.170.130.10 22 164 3.0E-27 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS22485 e54f63204b8fb3946403ed1c18cafa7a 916 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 163 3.8E-21 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APY29_RS22485 e54f63204b8fb3946403ed1c18cafa7a 916 Pfam PF00593 TonB dependent receptor 368 912 8.1E-40 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS22485 e54f63204b8fb3946403ed1c18cafa7a 916 Gene3D G3DSA:2.40.170.20 165 913 6.5E-55 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS22485 e54f63204b8fb3946403ed1c18cafa7a 916 SUPERFAMILY SSF56935 722 913 1.76E-87 T 28-03-2018 APY29_RS22485 e54f63204b8fb3946403ed1c18cafa7a 916 SUPERFAMILY SSF56935 34 228 1.76E-87 T 28-03-2018 APY29_RS22485 e54f63204b8fb3946403ed1c18cafa7a 916 SUPERFAMILY SSF56935 298 432 1.76E-87 T 28-03-2018 APY29_RS22485 e54f63204b8fb3946403ed1c18cafa7a 916 SUPERFAMILY SSF56935 470 686 1.76E-87 T 28-03-2018 APY29_RS02155 f0ab508239840faa160550a283cb924c 150 Gene3D G3DSA:3.30.450.30 26 148 1.3E-13 T 28-03-2018 APY29_RS02155 f0ab508239840faa160550a283cb924c 150 Pfam PF03259 Roadblock/LC7 domain 36 108 9.2E-6 T 28-03-2018 IPR004942 Roadblock/LAMTOR2 domain APY29_RS02155 f0ab508239840faa160550a283cb924c 150 SMART SM00960 30 119 2.4E-7 T 28-03-2018 IPR004942 Roadblock/LAMTOR2 domain APY29_RS02155 f0ab508239840faa160550a283cb924c 150 SUPERFAMILY SSF103196 28 146 5.76E-10 T 28-03-2018 APY29_RS20215 8d1c35ffc4d143835e7cdfb47a75d2b6 139 SUPERFAMILY SSF52091 13 110 2.35E-18 T 28-03-2018 IPR002645 STAS domain APY29_RS20215 8d1c35ffc4d143835e7cdfb47a75d2b6 139 Pfam PF01740 STAS domain 20 103 9.6E-12 T 28-03-2018 IPR002645 STAS domain APY29_RS20215 8d1c35ffc4d143835e7cdfb47a75d2b6 139 Gene3D G3DSA:3.30.750.24 3 124 1.2E-14 T 28-03-2018 IPR002645 STAS domain APY29_RS04500 8ad351c9da8f267b7c0e27e5152f0546 217 Pfam PF10741 Type II secretion system (T2SS), protein M subtype b 76 190 3.5E-31 T 28-03-2018 IPR034756 Type II secretion system (T2SS), protein M subtype b APY29_RS04500 8ad351c9da8f267b7c0e27e5152f0546 217 Gene3D G3DSA:3.30.70.60 82 202 5.8E-4 T 28-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 APY29_RS20230 7c6821b1537254ef0537e4ed16ade874 451 Pfam PF07158 Dicarboxylate carrier protein MatC N-terminus 1 149 6.4E-69 T 28-03-2018 IPR009827 Dicarboxylate carrier MatC N-terminal APY29_RS20230 7c6821b1537254ef0537e4ed16ade874 451 Pfam PF03600 Citrate transporter 273 444 7.6E-9 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 APY29_RS19030 0d1171ce9b85fcd8241aca8012e4b6b1 278 Pfam PF03799 Cell division protein FtsQ 107 219 2.1E-21 T 28-03-2018 IPR005548 Cell division protein FtsQ/DivIB APY29_RS19030 0d1171ce9b85fcd8241aca8012e4b6b1 278 Pfam PF08478 POTRA domain, FtsQ-type 35 103 1.5E-18 T 28-03-2018 IPR013685 POTRA domain, FtsQ-type APY29_RS19030 0d1171ce9b85fcd8241aca8012e4b6b1 278 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 4 227 24.352 T 28-03-2018 IPR026579 Cell division protein FtsQ GO:0090529 APY29_RS19875 4392a0cf6946efbaba704d41e75a82ce 266 Pfam PF04338 Protein of unknown function, DUF481 47 265 1.2E-61 T 28-03-2018 IPR007433 Protein of unknown function DUF481 APY29_RS19875 4392a0cf6946efbaba704d41e75a82ce 266 Gene3D G3DSA:2.40.170.20 19 266 6.2E-6 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APY29_RS14400 87c8ab095c3e9b4d347731ef3be08bf0 231 SUPERFAMILY SSF48452 99 203 4.67E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS14400 87c8ab095c3e9b4d347731ef3be08bf0 231 Gene3D G3DSA:1.25.40.10 97 229 7.3E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS12010 0dbfb9e153a22cda7de04bf30afd4f53 138 PIRSF PIRSF029509 1 138 2.9E-41 T 28-03-2018 IPR016923 Uncharacterised conserved protein UCP029509, membrane APY29_RS07890 b1abcd312a91860d7b00393a0c6fb372 363 Gene3D G3DSA:2.120.10.30 14 318 4.5E-5 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like APY29_RS07890 b1abcd312a91860d7b00393a0c6fb372 363 Pfam PF12275 Protein of unknown function (DUF3616) 24 358 1.9E-111 T 28-03-2018 IPR022060 Protein of unknown function DUF3616 APY29_RS01200 190eb349f4f5d45fa73a83c973e5013e 105 Pfam PF04341 Protein of unknown function, DUF485 14 101 2.7E-33 T 28-03-2018 IPR007436 Protein of unknown function DUF485 APY29_RS07430 c1423d6aa89c707cbd66e3d4232736c4 267 Pfam PF10670 Domain of unknown function (DUF4198) 18 243 1.6E-73 T 28-03-2018 IPR019613 Protein of unknown function DUF4198 APY29_RS07430 c1423d6aa89c707cbd66e3d4232736c4 267 Gene3D G3DSA:2.60.40.10 166 253 0.003 T 28-03-2018 IPR013783 Immunoglobulin-like fold APY29_RS07315 38c0eb75a7bd0f5ea3f0d8ae20966371 182 Gene3D G3DSA:3.40.50.1000 9 181 1.2E-30 T 28-03-2018 IPR023214 HAD-like domain APY29_RS07315 38c0eb75a7bd0f5ea3f0d8ae20966371 182 SUPERFAMILY SSF56784 16 178 1.94E-39 T 28-03-2018 IPR023214 HAD-like domain APY29_RS07315 38c0eb75a7bd0f5ea3f0d8ae20966371 182 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 21 171 9.5E-38 T 28-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 APY29_RS07315 38c0eb75a7bd0f5ea3f0d8ae20966371 182 Pfam PF08282 haloacid dehalogenase-like hydrolase 94 152 5.6E-7 T 28-03-2018 IPR023214 HAD-like domain APY29_RS07315 38c0eb75a7bd0f5ea3f0d8ae20966371 182 PIRSF PIRSF006118 7 181 5.0E-68 T 28-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 APY29_RS13245 40f23443be535272e6ce31a3ab2946b0 149 Gene3D G3DSA:3.10.450.50 24 149 4.9E-11 T 28-03-2018 APY29_RS13245 40f23443be535272e6ce31a3ab2946b0 149 SUPERFAMILY SSF54427 27 147 5.22E-12 T 28-03-2018 IPR032710 NTF2-like domain APY29_RS20060 5f7c40a95759112ee45fb04197d043a3 363 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 12 363 0.0 T 28-03-2018 IPR011673 Protein of unknown function DUF1615 APY29_RS20060 5f7c40a95759112ee45fb04197d043a3 363 Pfam PF07759 Protein of unknown function (DUF1615) 48 362 6.6E-138 T 28-03-2018 IPR011673 Protein of unknown function DUF1615 APY29_RS08340 4d38dee1be1d1912a733860c1c6a6409 481 Gene3D G3DSA:3.30.2290.10 21 234 4.5E-61 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain APY29_RS08340 4d38dee1be1d1912a733860c1c6a6409 481 SUPERFAMILY SSF111283 23 479 3.53E-138 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 APY29_RS08340 4d38dee1be1d1912a733860c1c6a6409 481 PIRSF PIRSF004919 21 480 1.5E-143 T 28-03-2018 IPR025502 TldD APY29_RS08340 4d38dee1be1d1912a733860c1c6a6409 481 Pfam PF01523 Putative modulator of DNA gyrase 40 331 1.5E-76 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 APY29_RS13555 0f1ba8525d8842b3e9e3dd959d134bd2 33 Pfam PF03073 TspO/MBR family 3 25 3.9E-6 T 28-03-2018 IPR004307 TspO/MBR-related protein GO:0016021 APY29_RS20495 d9e8b5b3c4872cc4b40638e73b69409a 310 Pfam PF01148 Cytidylyltransferase family 43 306 8.2E-64 T 28-03-2018 APY29_RS01145 02255edb1f1e3be5c67849d4ebcb7f51 290 Pfam PF04909 Amidohydrolase 4 277 3.0E-36 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 APY29_RS01145 02255edb1f1e3be5c67849d4ebcb7f51 290 Gene3D G3DSA:3.20.20.140 1 289 1.7E-40 T 28-03-2018 APY29_RS01145 02255edb1f1e3be5c67849d4ebcb7f51 290 SUPERFAMILY SSF51556 3 277 9.07E-65 T 28-03-2018 IPR032466 Metal-dependent hydrolase APY29_RS05195 87c4183d48e602d3ac2e8dee15a92aeb 149 Pfam PF02643 Uncharacterized ACR, COG1430 34 140 3.5E-31 T 28-03-2018 IPR003795 Protein of unknown function DUF192 APY29_RS00050 3df283ddbb4b657ed3abbecba08bba7b 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 135 5.5E-25 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APY29_RS08575 f7dbede92d19a23d738b1002649fe94d 155 Gene3D G3DSA:1.25.40.10 6 149 1.3E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APY29_RS01960 3e8087295f19334f53160a83b4e6fa98 156 Gene3D G3DSA:3.30.110.70 57 112 6.1E-4 T 28-03-2018 IPR035439 Uncharacterised protein family UPF0145/C2CD5 Reactome: R-HSA-1445148 APY29_RS04465 0cc65c33c71826b8b2ebdd45541d58e0 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 2.8E-22 T 28-03-2018 IPR003004 GspF/PilC family APY29_RS04465 0cc65c33c71826b8b2ebdd45541d58e0 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 2.8E-22 T 28-03-2018 IPR003004 GspF/PilC family APY29_RS04465 0cc65c33c71826b8b2ebdd45541d58e0 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 2.8E-22 T 28-03-2018 IPR003004 GspF/PilC family APY29_RS04465 0cc65c33c71826b8b2ebdd45541d58e0 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 2.8E-22 T 28-03-2018 IPR003004 GspF/PilC family APY29_RS04465 0cc65c33c71826b8b2ebdd45541d58e0 405 Pfam PF00482 Type II secretion system (T2SS), protein F 275 396 5.8E-26 T 28-03-2018 IPR018076 Type II secretion system F domain APY29_RS04465 0cc65c33c71826b8b2ebdd45541d58e0 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 1.8E-30 T 28-03-2018 IPR018076 Type II secretion system F domain APY29_RS04465 0cc65c33c71826b8b2ebdd45541d58e0 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 28-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 APY29_RS04465 0cc65c33c71826b8b2ebdd45541d58e0 405 Gene3D G3DSA:3.30.70.1120 99 169 0.021 T 28-03-2018 APY29_RS20615 31d39464f65702c9b1cba48433499c80 149 Pfam PF04519 Polymer-forming cytoskeletal 16 116 6.4E-26 T 28-03-2018 IPR007607 Protein of unknown function DUF583 APY29_RS19630 6894135364ef0bcebf8eaa1385cdfc33 247 Pfam PF01925 Sulfite exporter TauE/SafE 12 240 3.1E-30 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 APY29_RS06300 6e3eb5c407c4c8559a1cfaeded185228 255 Pfam PF11218 Protein of unknown function (DUF3011) 37 252 7.4E-73 T 28-03-2018 IPR021381 Protein of unknown function DUF3011 APY29_RS13610 9eebfa8dacd12f22d2979c4ffa9da829 94 Pfam PF13828 Domain of unknown function (DUF4190) 11 74 2.2E-22 T 28-03-2018 IPR025241 Domain of unknown function DUF4190 APY29_RS22150 acf9c506eb9cdc2f679080767e673a74 325 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 13 323 2.6E-20 T 28-03-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX APY29_RS21600 cef520eadc9ad4a602656828557970d3 65 SUPERFAMILY SSF53850 1 61 9.59E-5 T 28-03-2018 APY29_RS21600 cef520eadc9ad4a602656828557970d3 65 Gene3D G3DSA:3.40.190.10 1 36 1.6E-6 T 28-03-2018 APY29_RS13440 4127ac6ef0f2fd6d0b3f6d30df22dec9 476 PIRSF PIRSF006060 10 475 1.5E-94 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APY29_RS13440 4127ac6ef0f2fd6d0b3f6d30df22dec9 476 Pfam PF13520 Amino acid permease 27 442 1.2E-61 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APY29_RS15030 122eb5d7727c7931ec1f3e0ddd29e5a1 78 Gene3D G3DSA:1.20.5.300 10 56 6.0E-14 T 28-03-2018 APY29_RS15030 122eb5d7727c7931ec1f3e0ddd29e5a1 78 Hamap MF_00715 Protein SlyX [slyX]. 11 78 15.699 T 28-03-2018 IPR007236 SlyX APY29_RS15030 122eb5d7727c7931ec1f3e0ddd29e5a1 78 Pfam PF04102 SlyX 12 78 4.6E-16 T 28-03-2018 IPR007236 SlyX APY29_RS19825 09cd88b67b8336a3496d1c00d8dfb761 82 Pfam PF13627 Prokaryotic lipoprotein-attachment site 11 33 9.8E-7 T 28-03-2018 IPR032831 Prokaryotic lipoprotein-attachment site APY29_RS05665 674113dc2017cfc4c7a54772c2d54664 213 Pfam PF07791 Protein of unknown function (DUF1629) 12 133 5.9E-49 T 28-03-2018 IPR012433 Protein of unknown function DUF1629 APY29_RS07395 5c1800b69d5852b0f13e837efa568c8f 90 Pfam PF04226 Transglycosylase associated protein 40 86 3.7E-11 T 28-03-2018 IPR007341 Transglycosylase-associated protein GO:0016021 APY29_RS10870 a8d14e2af93066bd856cfabead5b3385 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 117 143 1.8E-60 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 APY29_RS10870 a8d14e2af93066bd856cfabead5b3385 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 326 345 1.8E-60 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 APY29_RS10870 a8d14e2af93066bd856cfabead5b3385 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 354 371 1.8E-60 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 APY29_RS10870 a8d14e2af93066bd856cfabead5b3385 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 145 164 1.8E-60 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 APY29_RS10870 a8d14e2af93066bd856cfabead5b3385 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 170 191 1.8E-60 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 APY29_RS10870 a8d14e2af93066bd856cfabead5b3385 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 386 405 1.8E-60 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 APY29_RS10870 a8d14e2af93066bd856cfabead5b3385 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 222 245 1.8E-60 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 APY29_RS10870 a8d14e2af93066bd856cfabead5b3385 444 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 38 410 1.3E-119 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 APY29_RS10870 a8d14e2af93066bd856cfabead5b3385 444 Pfam PF01566 Natural resistance-associated macrophage protein 58 414 2.1E-130 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 APY29_RS10870 a8d14e2af93066bd856cfabead5b3385 444 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 21 442 39.413 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 APY29_RS21125 621fb583eb9ffda325edb69dd33387cd 312 Gene3D G3DSA:2.60.200.20 3 59 2.5E-5 T 28-03-2018 APY29_RS00415 6aaed630219e9cd7429d564cc8844d58 183 Gene3D G3DSA:3.90.1340.10 1 52 9.8E-24 T 28-03-2018 IPR011083 Phage tail collar domain APY29_RS00415 6aaed630219e9cd7429d564cc8844d58 183 Gene3D G3DSA:4.10.1070.10 53 170 2.2E-7 T 28-03-2018 APY29_RS00415 6aaed630219e9cd7429d564cc8844d58 183 SUPERFAMILY SSF88874 2 177 5.23E-46 T 28-03-2018 APY29_RS00415 6aaed630219e9cd7429d564cc8844d58 183 Pfam PF07484 Phage Tail Collar Domain 6 61 2.0E-28 T 28-03-2018 IPR011083 Phage tail collar domain APY29_RS08330 f055881fc63868177ded937b7824caff 1306 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 10 1286 0.0 T 28-03-2018 IPR011836 Conserved hypothetical protein CHP02099 APY29_RS08330 f055881fc63868177ded937b7824caff 1306 Pfam PF13502 AsmA-like C-terminal region 1034 1275 1.1E-58 T 28-03-2018 IPR032712 AsmA-like, C-terminal APY29_RS08330 f055881fc63868177ded937b7824caff 1306 Pfam PF13116 Protein of unknown function 509 783 3.7E-41 T 28-03-2018 IPR025263 Domain of unknown function DUF3971 APY29_RS21000 e32865ee1cc60007cd55f19f5be74452 313 Pfam PF05661 Protein of unknown function (DUF808) 4 297 1.1E-110 T 28-03-2018 IPR008526 Inner membrane protein YedI APY29_RS21000 e32865ee1cc60007cd55f19f5be74452 313 PIRSF PIRSF016660 1 311 1.6E-112 T 28-03-2018 IPR008526 Inner membrane protein YedI APY29_RS00025 58dbd99a3254a06b501cdca89b55a427 278 Pfam PF02517 CAAX protease self-immunity 167 266 9.9E-19 T 28-03-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 APY29_RS20355 529782e1f2ad1e0ac4728d470201e41b 699 Gene3D G3DSA:1.20.120.330 117 436 0.0022 T 28-03-2018 APY29_RS18935 eebd7b177624024f7fd8a6be926f99b0 181 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 4 181 3.1E-55 T 28-03-2018 IPR018636 Protein of unknown function DUF2058 APY29_RS02365 29567ad92a1e715d6521ff2517f94741 364 Pfam PF11379 Protein of unknown function (DUF3182) 13 358 1.2E-125 T 28-03-2018 IPR021519 Protein of unknown function DUF3182 APY29_RS10475 f6f09f42d4e3d6e01a9d9487fc0b5caf 56 Pfam PF04995 Heme exporter protein D (CcmD) 2 44 7.2E-10 T 28-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 APY29_RS10475 f6f09f42d4e3d6e01a9d9487fc0b5caf 56 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 2 42 2.2E-7 T 28-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 APY29_RS01555 727642a57ba1deced24630ec23a8ea7c 96 Pfam PF11191 Protein of unknown function (DUF2782) 33 96 1.3E-15 T 28-03-2018 IPR021357 Protein of unknown function DUF2782 APY29_RS11550 5ad1e5bfb354cb6e54001b65ef9ae5ce 226 Pfam PF11679 Protein of unknown function (DUF3275) 14 219 8.2E-87 T 28-03-2018 IPR021693 Protein of unknown function DUF3275 APY29_RS00920 65290357f5f68c712b2b54762024e343 260 TIGRFAM TIGR02781 VirB9: P-type conjugative transfer protein VirB9 18 243 1.4E-67 T 28-03-2018 IPR014148 P-type conjugative transfer protein VirB9 APY29_RS00920 65290357f5f68c712b2b54762024e343 260 Pfam PF03524 Conjugal transfer protein 39 242 1.6E-62 T 28-03-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX APY29_RS11280 65b88348021ce823aa32b481c5f387ee 515 Pfam PF05231 MASE1 3 280 2.1E-43 T 28-03-2018 IPR007895 MASE1 APY29_RS13320 61ea5737753a07523bbdeb075df9e957 306 PIRSF PIRSF015283 1 306 2.1E-100 T 28-03-2018 IPR016631 Regulatory, RpfE APY29_RS03085 60f8597dfb0f9a6ee4dc684197319a9f 425 Pfam PF04932 O-Antigen ligase 189 344 5.8E-17 T 28-03-2018 IPR007016 O-antigen ligase-related APY29_RS01540 fa7662282552f737d5ef8ed214b464ae 558 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 198 466 3.1E-29 T 28-03-2018 IPR005565 Haemolysin activator HlyB, C-terminal APY29_RS01540 fa7662282552f737d5ef8ed214b464ae 558 Gene3D G3DSA:3.10.20.310 72 137 8.1E-9 T 28-03-2018 APY29_RS01540 fa7662282552f737d5ef8ed214b464ae 558 Pfam PF08479 POTRA domain, ShlB-type 71 137 2.4E-7 T 28-03-2018 IPR013686 Polypeptide-transport-associated, ShlB-type APY29_RS01540 fa7662282552f737d5ef8ed214b464ae 558 Gene3D G3DSA:2.40.160.50 166 558 2.2E-41 T 28-03-2018 APY29_RS07670 b1b139de89748ed6546bc862f770f101 333 Pfam PF13478 XdhC Rossmann domain 179 319 1.3E-21 T 28-03-2018 IPR027051 XdhC Rossmann domain APY29_RS07670 b1b139de89748ed6546bc862f770f101 333 Pfam PF02625 XdhC and CoxI family 34 101 5.1E-24 T 28-03-2018 IPR003777 XdhC- CoxI APY29_RS21520 f31b647eef8c598ebc9654e806cd3af4 487 Gene3D G3DSA:1.20.1600.10 20 474 2.2E-102 T 28-03-2018 APY29_RS21520 f31b647eef8c598ebc9654e806cd3af4 487 Pfam PF02321 Outer membrane efflux protein 67 257 2.8E-29 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS21520 f31b647eef8c598ebc9654e806cd3af4 487 Pfam PF02321 Outer membrane efflux protein 282 466 8.0E-31 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS21520 f31b647eef8c598ebc9654e806cd3af4 487 SUPERFAMILY SSF56954 5 32 1.57E-109 T 28-03-2018 APY29_RS21520 f31b647eef8c598ebc9654e806cd3af4 487 SUPERFAMILY SSF56954 58 469 1.57E-109 T 28-03-2018 APY29_RS21520 f31b647eef8c598ebc9654e806cd3af4 487 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 468 6.3E-119 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APY29_RS12330 d5a4e42ec017a10a29e7a7728bbd946c 186 Pfam PF13166 AAA domain 93 173 2.4E-16 T 28-03-2018 IPR026866 Protein CR006, P-loop domain APY29_RS12330 d5a4e42ec017a10a29e7a7728bbd946c 186 Gene3D G3DSA:3.40.50.300 74 172 3.0E-6 T 28-03-2018 APY29_RS05350 e01965463e56c49572e2af060b76cb87 177 Pfam PF04351 Pilus assembly protein, PilP 34 174 2.1E-46 T 28-03-2018 IPR007446 Pilus assembly protein PilP APY29_RS05350 e01965463e56c49572e2af060b76cb87 177 PIRSF PIRSF016481 3 177 3.7E-59 T 28-03-2018 IPR007446 Pilus assembly protein PilP APY29_RS09150 3a0d7f3124eaf995b2e24daf96b4850e 479 Pfam PF13807 G-rich domain on putative tyrosine kinase 394 467 7.1E-21 T 28-03-2018 IPR032807 Tyrosine kinase, G-rich domain APY29_RS09150 3a0d7f3124eaf995b2e24daf96b4850e 479 Gene3D G3DSA:3.30.1890.10 57 364 5.4E-27 T 28-03-2018 APY29_RS09150 3a0d7f3124eaf995b2e24daf96b4850e 479 Pfam PF02706 Chain length determinant protein 30 118 3.8E-12 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 APY29_RS13535 99b076b1900d5c32cc3a56b47377a999 104 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 1 103 2.9E-37 T 28-03-2018 IPR009799 EthD domain APY29_RS13535 99b076b1900d5c32cc3a56b47377a999 104 Pfam PF07110 EthD domain 18 92 2.3E-8 T 28-03-2018 IPR009799 EthD domain APY29_RS13535 99b076b1900d5c32cc3a56b47377a999 104 Gene3D G3DSA:3.30.70.100 2 100 3.9E-21 T 28-03-2018 APY29_RS13535 99b076b1900d5c32cc3a56b47377a999 104 SUPERFAMILY SSF54909 1 102 2.95E-21 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel APY29_RS03305 24511f0bfe61cf571b839b2ae98c4076 422 Pfam PF12040 Domain of unknown function (DUF3526) 274 415 3.3E-33 T 28-03-2018 IPR021913 Protein of unknown function DUF3526 APY29_RS09835 b5063be52042a0b3f10bfdbd6089ac95 427 Pfam PF13387 Domain of unknown function (DUF4105) 59 194 3.8E-16 T 28-03-2018 IPR025178 Domain of unknown function DUF4105 APY29_RS12875 1aaa54011c3389f498dea89c309baaab 430 Pfam PF02120 Flagellar hook-length control protein FliK 311 391 4.7E-24 T 28-03-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal APY29_RS21610 a578a3f99215425c4704f573074c1040 225 Gene3D G3DSA:3.10.180.10 1 116 1.1E-14 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS21610 a578a3f99215425c4704f573074c1040 225 SUPERFAMILY SSF54593 4 118 2.02E-13 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS14200 de4f3b2627c9f580633989f6c8b9e66b 232 Pfam PF08241 Methyltransferase domain 50 147 4.3E-19 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APY29_RS14200 de4f3b2627c9f580633989f6c8b9e66b 232 Gene3D G3DSA:3.40.50.150 31 230 6.3E-31 T 28-03-2018 APY29_RS14200 de4f3b2627c9f580633989f6c8b9e66b 232 SUPERFAMILY SSF53335 15 204 5.43E-32 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APY29_RS12755 cd37671085169cc1708aa2346bfbd5f6 188 Gene3D G3DSA:2.40.10.220 71 188 1.9E-6 T 28-03-2018 APY29_RS12755 cd37671085169cc1708aa2346bfbd5f6 188 Pfam PF16823 Atypical PilZ domain, cyclic di-GMP receptor 46 186 3.5E-48 T 28-03-2018 IPR031800 Cyclic di-GMP receptor, atypical PilZ domain APY29_RS06030 a400eaf842fa3bfb4eda3067eeba99e9 146 Pfam PF12098 Protein of unknown function (DUF3574) 37 146 4.2E-34 T 28-03-2018 IPR021957 Protein of unknown function DUF3574 APY29_RS06075 62c83b8e97f60d6292c600b0071427ee 346 Gene3D G3DSA:3.20.20.100 15 332 2.8E-85 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS06075 62c83b8e97f60d6292c600b0071427ee 346 Pfam PF00248 Aldo/keto reductase family 28 329 9.9E-69 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS06075 62c83b8e97f60d6292c600b0071427ee 346 SUPERFAMILY SSF51430 14 329 6.02E-89 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain APY29_RS05025 7c8d63b3b8c2e8ed056ed3af5cfc78c5 625 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 138 592 56.371 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 APY29_RS05025 7c8d63b3b8c2e8ed056ed3af5cfc78c5 625 Pfam PF13667 ThiC-associated domain 22 98 1.1E-29 T 28-03-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 APY29_RS05025 7c8d63b3b8c2e8ed056ed3af5cfc78c5 625 Pfam PF01964 Radical SAM ThiC family 139 586 8.8E-200 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 APY29_RS05025 7c8d63b3b8c2e8ed056ed3af5cfc78c5 625 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 138 590 3.8E-215 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 APY29_RS20555 a87ad6df239772846231457763f0148d 737 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 13 716 4.6E-208 T 28-03-2018 IPR010019 Integral membrane protein, YccS APY29_RS20555 a87ad6df239772846231457763f0148d 737 Pfam PF13515 Fusaric acid resistance protein-like 414 534 2.2E-21 T 28-03-2018 APY29_RS20555 a87ad6df239772846231457763f0148d 737 Pfam PF12805 FUSC-like inner membrane protein yccS 71 357 4.4E-102 T 28-03-2018 IPR032692 Integral membrane protein YccS, N-terminal APY29_RS20555 a87ad6df239772846231457763f0148d 737 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 716 5.6E-229 T 28-03-2018 IPR010020 Integral membrane protein, YccS/YhfK APY29_RS23660 699d9282dfe14802db589889b9bc71f1 235 Gene3D G3DSA:3.40.50.300 2 235 2.1E-5 T 28-03-2018 APY29_RS20510 b69c82fc95a3dde47b4f2020eec0ffd0 497 TIGRFAM TIGR04222 near_uncomplex: TIGR04222 domain 227 447 5.4E-47 T 28-03-2018 IPR026467 Ser/Gly rich, Cys interspersed, C-terminal domain APY29_RS07030 7b2f8fd8e6b28fa0f28ea1e7a59b4248 257 Gene3D G3DSA:1.20.120.330 11 196 2.8E-4 T 28-03-2018 APY29_RS07030 7b2f8fd8e6b28fa0f28ea1e7a59b4248 257 Pfam PF04012 PspA/IM30 family 2 228 9.8E-38 T 28-03-2018 IPR007157 PspA/IM30 APY29_RS01180 79d89941917d1821e59c5bc22fdf9af6 302 Pfam PF14415 Domain of unknown function (DUF4424) 23 296 1.2E-83 T 28-03-2018 IPR025538 Domain of unknown function DUF4424 APY29_RS04740 0ea4723acecad5d10a0ba586e13fb1f6 99 Gene3D G3DSA:3.40.50.1820 4 97 4.1E-6 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS04740 0ea4723acecad5d10a0ba586e13fb1f6 99 Pfam PF10512 Cell division cycle-associated protein 8 35 97 1.9E-4 T 28-03-2018 IPR018867 Cell division protein borealin Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-4615885|Reactome: R-HSA-5663220|Reactome: R-HSA-68877 APY29_RS23360 cd619d7f84b53f5a1f27a8a29870433c 891 Pfam PF13700 Domain of unknown function (DUF4158) 5 168 2.6E-28 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 APY29_RS23360 cd619d7f84b53f5a1f27a8a29870433c 891 Pfam PF01526 Tn3 transposase DDE domain 589 890 1.8E-117 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 APY29_RS07750 32eafa727233b00a3c03181dffa1809b 237 Hamap MF_00801 Endonuclease V [nfi]. 14 227 35.271 T 28-03-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 APY29_RS07750 32eafa727233b00a3c03181dffa1809b 237 Pfam PF04493 Endonuclease V 24 218 8.1E-69 T 28-03-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 APY29_RS17760 8f074bb44e18fca3f97cba47345e6bd5 60 Pfam PF10459 Peptidase S46 1 58 7.2E-23 T 28-03-2018 IPR019500 Peptidase S46 GO:0008239|GO:0070009 APY29_RS09455 89be37745005a75e429d7f2cd7bca7a4 132 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 73 128 6.9E-19 T 28-03-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 APY29_RS10125 566fd8b867bf772a277c5c34791b88e6 291 Pfam PF07859 alpha/beta hydrolase fold 71 261 4.2E-13 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 APY29_RS10125 566fd8b867bf772a277c5c34791b88e6 291 Gene3D G3DSA:3.40.50.1820 29 290 1.2E-38 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS10125 566fd8b867bf772a277c5c34791b88e6 291 SUPERFAMILY SSF53474 31 268 1.39E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold APY29_RS10295 7bea9e03555a3d57a6a9132a805f8e57 166 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 24 130 8.9E-14 T 28-03-2018 APY29_RS10295 7bea9e03555a3d57a6a9132a805f8e57 166 Gene3D G3DSA:3.10.180.10 12 165 5.7E-24 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS10295 7bea9e03555a3d57a6a9132a805f8e57 166 SUPERFAMILY SSF54593 17 163 7.25E-28 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS09375 34527a65fd0c0776eb8f1abbd5e321d4 621 Pfam PF05960 Bacterial protein of unknown function (DUF885) 75 591 2.8E-153 T 28-03-2018 IPR010281 Protein of unknown function DUF885 APY29_RS10885 292ff2b3afec483d9be0ac6a498a974b 76 TIGRFAM TIGR03510 XapX: XapX domain 5 51 2.3E-12 T 28-03-2018 IPR020017 XapX domain APY29_RS21855 7053a674c796be30a1892156b16f4d63 538 Pfam PF03929 PepSY-associated TM region 10 370 9.8E-63 T 28-03-2018 IPR005625 PepSY-associated TM protein APY29_RS03900 9439aecd2b5aec96001abb5e574eb369 127 Pfam PF04138 GtrA-like protein 9 126 6.2E-16 T 28-03-2018 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 APY29_RS01275 3c6e2f146085112893fb989191f04ae8 423 SUPERFAMILY SSF56954 2 414 5.49E-56 T 28-03-2018 APY29_RS01275 3c6e2f146085112893fb989191f04ae8 423 Pfam PF02321 Outer membrane efflux protein 234 410 1.4E-9 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS01275 3c6e2f146085112893fb989191f04ae8 423 Pfam PF02321 Outer membrane efflux protein 30 211 2.5E-15 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APY29_RS01275 3c6e2f146085112893fb989191f04ae8 423 Gene3D G3DSA:1.20.1600.10 15 416 3.6E-45 T 28-03-2018 APY29_RS07120 cc20c8ab6ac5afcfb217b36d89a5ae91 252 Pfam PF07277 SapC 7 232 9.4E-65 T 28-03-2018 IPR010836 SapC APY29_RS21860 0dcca04568b054c32cc74f31eacc48ab 111 Pfam PF11804 Protein of unknown function (DUF3325) 4 104 3.3E-29 T 28-03-2018 IPR021762 Protein of unknown function DUF3325 APY29_RS01235 165147c2ab74d0498d3df80804821132 145 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 46 126 8.3E-9 T 28-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 APY29_RS01235 165147c2ab74d0498d3df80804821132 145 Gene3D G3DSA:3.90.1590.10 2 137 6.9E-20 T 28-03-2018 APY29_RS01235 165147c2ab74d0498d3df80804821132 145 SUPERFAMILY SSF51316 19 139 1.88E-30 T 28-03-2018 IPR011057 Mss4-like APY29_RS02990 89a76175d36a006beff3dbdbddc35e57 199 Pfam PF11304 Protein of unknown function (DUF3106) 32 115 2.2E-11 T 28-03-2018 IPR021455 Protein of unknown function DUF3106 APY29_RS00495 ef3f7b5495f715594638d1b94f44c6c5 218 Pfam PF03006 Haemolysin-III related 19 205 1.2E-25 T 28-03-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 APY29_RS16520 ec91c890ee0ab9386d8648dcc524af4b 111 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 17 110 9.6E-38 T 28-03-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 APY29_RS16520 ec91c890ee0ab9386d8648dcc524af4b 111 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 22 95 6.4E-15 T 28-03-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 APY29_RS16305 7f169f50b8708c09db7779ce96350924 204 Pfam PF06078 Bacterial protein of unknown function (DUF937) 9 143 2.1E-28 T 28-03-2018 IPR009282 Protein of unknown function DUF937 APY29_RS16305 7f169f50b8708c09db7779ce96350924 204 ProSitePatterns PS00018 EF-hand calcium-binding domain. 181 193 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site APY29_RS07525 789e7ee1de3c8f174c838adc469b572d 141 Gene3D G3DSA:4.10.520.10 44 140 1.8E-14 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APY29_RS07525 789e7ee1de3c8f174c838adc469b572d 141 Pfam PF00216 Bacterial DNA-binding protein 45 139 3.1E-13 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APY29_RS07525 789e7ee1de3c8f174c838adc469b572d 141 SUPERFAMILY SSF47729 44 139 2.94E-12 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APY29_RS07525 789e7ee1de3c8f174c838adc469b572d 141 SMART SM00411 44 141 1.1E-4 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APY29_RS08065 5582ad0ca95e668f0c4767f151c1bfe3 80 SUPERFAMILY SSF55174 2 69 2.06E-17 T 28-03-2018 APY29_RS08065 5582ad0ca95e668f0c4767f151c1bfe3 80 Pfam PF13275 S4 domain 7 69 2.0E-23 T 28-03-2018 APY29_RS08065 5582ad0ca95e668f0c4767f151c1bfe3 80 Gene3D G3DSA:3.10.290.10 1 71 1.7E-12 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 APY29_RS08050 1577302c5593ae5773a5c865ce1a7c9a 178 Pfam PF13211 Protein of unknown function (DUF4019) 65 171 6.6E-28 T 28-03-2018 IPR025091 Protein of unknown function DUF4019 APY29_RS13645 aca32756cf969b075556ddf92b38f682 427 Gene3D G3DSA:1.20.1250.20 241 426 5.2E-17 T 28-03-2018 APY29_RS13645 aca32756cf969b075556ddf92b38f682 427 SUPERFAMILY SSF103473 5 423 1.02E-55 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS13645 aca32756cf969b075556ddf92b38f682 427 Pfam PF07690 Major Facilitator Superfamily 54 283 7.3E-19 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS13645 aca32756cf969b075556ddf92b38f682 427 Gene3D G3DSA:1.20.1250.20 16 226 9.0E-22 T 28-03-2018 APY29_RS22465 9f9fddd54f8d64a5a0218476f087911a 402 Pfam PF05593 RHS Repeat 129 163 1.2E-8 T 28-03-2018 IPR031325 RHS repeat APY29_RS03925 c9b509d5013f33ce937bbb556aaf4a2a 408 Pfam PF02687 FtsX-like permease family 315 398 3.5E-9 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 APY29_RS03925 c9b509d5013f33ce937bbb556aaf4a2a 408 Pfam PF12704 MacB-like periplasmic core domain 51 249 6.7E-11 T 28-03-2018 IPR025857 MacB-like periplasmic core domain APY29_RS00950 d39c347d3a5eb85a84fcba9fe530d272 72 Pfam PF11455 Protein of unknown function (DUF3018) 6 70 1.1E-32 T 28-03-2018 IPR021558 Protein of unknown function DUF3018 APY29_RS22140 b40dad7a68498636263daa64d5607341 269 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 114 3.7E-17 T 28-03-2018 IPR002654 Glycosyl transferase, family 25 APY29_RS19455 08fb78d7b3ae862da7bc8d5e92e46c33 158 Gene3D G3DSA:3.30.1360.100 82 154 1.5E-14 T 28-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain APY29_RS19455 08fb78d7b3ae862da7bc8d5e92e46c33 158 Pfam PF04612 Type II secretion system (T2SS), protein M 7 151 3.5E-25 T 28-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 APY29_RS19455 08fb78d7b3ae862da7bc8d5e92e46c33 158 SUPERFAMILY SSF103054 81 155 2.09E-12 T 28-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain APY29_RS20965 3d1414c0ef3149675bf905f53a9dc9b8 61 Pfam PF11154 Protein of unknown function (DUF2934) 5 41 6.3E-12 T 28-03-2018 IPR021327 Protein of unknown function DUF2934 APY29_RS10795 5d51a267a064dcf76924975640907588 330 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 104 311 1.7E-88 T 28-03-2018 IPR014142 P-type conjugative transfer protein TrbG APY29_RS10795 5d51a267a064dcf76924975640907588 330 Pfam PF03524 Conjugal transfer protein 103 323 2.0E-64 T 28-03-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX APY29_RS04380 0529a06707393cf0f7195b96b7152ab1 360 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 348 6.9E-70 T 28-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 APY29_RS04380 0529a06707393cf0f7195b96b7152ab1 360 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 4 349 5.9E-113 T 28-03-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 APY29_RS13290 3626536926d60a9164e7968e97de5fb7 138 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 65 137 3.1E-20 T 28-03-2018 IPR022385 Rhs repeat-associated core GO:0097264 APY29_RS07040 e711a9cd0ba69f18459a2d9446ca995e 223 Pfam PF10679 Protein of unknown function (DUF2491) 3 220 2.1E-66 T 28-03-2018 IPR019621 Protein of unknown function DUF2491 APY29_RS20035 a318f15891ed00fea7ac3789f51e690d 185 Gene3D G3DSA:3.30.230.10 14 146 1.3E-4 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APY29_RS00710 8565a27c90dcaefcef4ef7d52cc50f8d 269 Pfam PF13709 Domain of unknown function (DUF4159) 70 267 1.7E-53 T 28-03-2018 IPR025297 Domain of unknown function DUF4159 APY29_RS14135 4b893b287364c8716aa06e6736f5a041 208 Pfam PF01865 Protein of unknown function DUF47 59 203 3.3E-5 T 28-03-2018 IPR018445 Putative phosphate transport regulator APY29_RS14135 4b893b287364c8716aa06e6736f5a041 208 Gene3D G3DSA:3.40.190.80 49 165 1.8E-4 T 28-03-2018 APY29_RS11510 b2442e46aaa9525c4e2fb8ad803a6247 215 Gene3D G3DSA:1.20.5.320 37 144 8.8E-6 T 28-03-2018 APY29_RS22805 82d02418e400526f58a4f02e8458e3ae 225 Pfam PF03235 Protein of unknown function DUF262 8 144 9.5E-21 T 28-03-2018 IPR004919 Domain of unknown function DUF262 APY29_RS18400 a6432b0043d2e63649a36077e074a318 189 Gene3D G3DSA:3.40.50.880 1 183 8.3E-26 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS18400 a6432b0043d2e63649a36077e074a318 189 SUPERFAMILY SSF52317 1 172 4.76E-32 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like APY29_RS18400 a6432b0043d2e63649a36077e074a318 189 Pfam PF01965 DJ-1/PfpI family 3 167 8.7E-19 T 28-03-2018 IPR002818 DJ-1/PfpI APY29_RS00190 fa76c27ff87d6efcbcf1e297b0ec544d 218 Gene3D G3DSA:2.160.10.10 111 209 0.013 T 28-03-2018 APY29_RS00190 fa76c27ff87d6efcbcf1e297b0ec544d 218 Gene3D G3DSA:2.160.10.10 19 110 9.3E-4 T 28-03-2018 APY29_RS22370 c593cc68ab589be756d7e2974be2fcf3 214 Pfam PF14300 Domain of unknown function (DUF4375) 97 204 9.6E-11 T 28-03-2018 IPR025402 Domain of unknown function DUF4375 APY29_RS13710 fe4ee108018b40effd1527b140178231 651 Gene3D G3DSA:2.140.10.30 52 630 5.9E-4 T 28-03-2018 APY29_RS13710 fe4ee108018b40effd1527b140178231 651 Pfam PF05787 Bacterial protein of unknown function (DUF839) 201 556 5.5E-16 T 28-03-2018 IPR008557 Protein of unknown function DUF839 APY29_RS16580 86e2ccf3a77b9f3a6ed87f2d842dbbe6 374 Pfam PF03389 MobA/MobL family 45 225 1.8E-14 T 28-03-2018 IPR005053 MobA/MobL protein APY29_RS17865 15e7ec6a96dac953ad72dfe0022abf6c 153 Pfam PF07486 Cell Wall Hydrolase 35 142 3.6E-17 T 28-03-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 APY29_RS09015 ff6962c8410570f29f1221d36d8f42c8 257 Gene3D G3DSA:1.20.58.430 25 197 7.0E-4 T 28-03-2018 APY29_RS15765 b498ccc75a35c45e2236e9e515f2fb4c 305 Pfam PF13796 Putative sensor 118 297 2.3E-42 T 28-03-2018 IPR025828 Putative sensor domain APY29_RS20625 94f2199567d6525d9a9311a97f99f493 208 Pfam PF13548 Domain of unknown function (DUF4126) 9 173 9.5E-44 T 28-03-2018 IPR025196 Domain of unknown function DUF4126 APY29_RS07025 314b30fba94a53f8ad48e555de93550f 138 Pfam PF09938 Uncharacterized protein conserved in bacteria (DUF2170) 4 136 1.7E-41 T 28-03-2018 IPR019231 Protein of unknown function DUF2170 APY29_RS14735 648569ab4287374ffd2ce898404a1703 176 Pfam PF11655 Protein of unknown function (DUF2589) 6 165 2.1E-25 T 28-03-2018 IPR024510 Protein of unknown function DUF2589 APY29_RS18795 3cbbff11248b4c12edb788e19fa7752c 117 Pfam PF04342 Putative member of DMT superfamily (DUF486) 13 115 3.4E-45 T 28-03-2018 IPR007437 Putative member of DMT superfamily APY29_RS18795 3cbbff11248b4c12edb788e19fa7752c 117 PIRSF PIRSF021239 6 117 2.8E-51 T 28-03-2018 IPR007437 Putative member of DMT superfamily APY29_RS10455 672bd670d7c8b54a994e2a461341a05c 136 Pfam PF03918 Cytochrome C biogenesis protein 19 129 1.9E-47 T 28-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family APY29_RS04505 8f5a7de3e5a17ec6589f75bb74e68074 267 ProDom PD046566 PATHWAY N GENERAL SECRETION PRECURSOR SIGNAL MEMBRANE XPSN TRANSMEMBRANE INNER 1 165 1.0E-77 T 28-03-2018 APY29_RS05515 a8ad607829bb9eb8a111f5db71aac86f 942 PIRSF PIRSF035905 559 725 400.0 T 28-03-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein APY29_RS05515 a8ad607829bb9eb8a111f5db71aac86f 942 PIRSF PIRSF035905 727 902 2.2E-7 T 28-03-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein APY29_RS05515 a8ad607829bb9eb8a111f5db71aac86f 942 PIRSF PIRSF035905 2 561 1.0E-62 T 28-03-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein APY29_RS05515 a8ad607829bb9eb8a111f5db71aac86f 942 Pfam PF10101 Predicted membrane protein (DUF2339) 182 905 2.2E-134 T 28-03-2018 IPR019286 Protein of unknown function DUF2339, transmembrane APY29_RS07065 605a092b26b41f5374e1460bc0c4b100 144 SUPERFAMILY SSF103473 3 142 6.28E-7 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS07065 605a092b26b41f5374e1460bc0c4b100 144 Gene3D G3DSA:1.20.1250.20 1 144 1.4E-8 T 28-03-2018 APY29_RS16470 3d5883a8183a8ff3450c43fea0f18c3f 120 SUPERFAMILY SSF52091 2 113 8.83E-15 T 28-03-2018 IPR002645 STAS domain APY29_RS16470 3d5883a8183a8ff3450c43fea0f18c3f 120 Gene3D G3DSA:3.30.750.24 1 119 2.3E-6 T 28-03-2018 IPR002645 STAS domain APY29_RS22460 67e7a9876630dfe59158078e7fdfb059 50 Pfam PF13683 Integrase core domain 5 42 2.2E-9 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 APY29_RS22460 67e7a9876630dfe59158078e7fdfb059 50 Gene3D G3DSA:3.30.420.10 4 50 5.0E-6 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 APY29_RS04485 338d9531aea76a782d7bf282ab5e742e 211 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site APY29_RS00915 1210dbfa5e7104b5aa9ca130d78d9774 224 SUPERFAMILY SSF54427 86 223 3.99E-31 T 28-03-2018 IPR032710 NTF2-like domain APY29_RS00915 1210dbfa5e7104b5aa9ca130d78d9774 224 Pfam PF04335 VirB8 protein 26 220 6.2E-25 T 28-03-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 APY29_RS02415 f0bf44ba78564c2b2c910b7808eb766c 373 Pfam PF00487 Fatty acid desaturase 71 337 1.4E-32 T 28-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 APY29_RS21395 93b48ae2fbcff5451b25cc684a226403 88 Pfam PF03692 Putative zinc- or iron-chelating domain 7 62 4.4E-5 T 28-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein APY29_RS12430 7a22b7c4a6687bcc5cc7c88d914b401c 178 Pfam PF06884 Protein of unknown function (DUF1264) 1 144 2.4E-52 T 28-03-2018 IPR010686 Oil body-associated protein-like APY29_RS03530 0387190383e0eddeac5db601d106633e 308 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 50 272 7.3E-54 T 28-03-2018 IPR018713 Domain of unknown function DUF2236 APY29_RS22475 9b84bf1429ca132ed2161b7df1b1c248 1284 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 954 1282 1.5E-56 T 28-03-2018 IPR007452 Translocation and assembly module TamB APY29_RS14730 4b1de70d3fb398993d5d04b159b4b43b 205 Pfam PF11655 Protein of unknown function (DUF2589) 15 191 2.9E-48 T 28-03-2018 IPR024510 Protein of unknown function DUF2589 APY29_RS14730 4b1de70d3fb398993d5d04b159b4b43b 205 ProDom PD104924 XAC1607 AF0417 7 201 2.0E-101 T 28-03-2018 APY29_RS11600 06574e8d91cd90363e137c2037d76835 194 Pfam PF16219 Domain of unknown function (DUF4879) 67 185 9.6E-38 T 28-03-2018 IPR032624 Protein of unknown function DUF4879 APY29_RS23035 a9e33059b78be976b71b829a46906937 47 SUPERFAMILY SSF56399 3 44 4.6E-9 T 28-03-2018 APY29_RS23035 a9e33059b78be976b71b829a46906937 47 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 2 36 1.6E-4 T 28-03-2018 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 APY29_RS01670 52aca05bf85c74a1505bcbe6c773628d 182 Gene3D G3DSA:3.40.1350.10 4 146 1.7E-5 T 28-03-2018 APY29_RS04295 617cad68c353bec9e71b753d2d722735 308 Pfam PF02470 MlaD protein 39 115 1.7E-14 T 28-03-2018 IPR003399 Mce/MlaD APY29_RS04295 617cad68c353bec9e71b753d2d722735 308 Gene3D G3DSA:1.20.120.570 115 291 2.0E-5 T 28-03-2018 APY29_RS00120 d616adb410961cd78a689f99c635e6a5 174 Pfam PF07751 Abi-like protein 6 87 8.8E-24 T 28-03-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like APY29_RS17740 0b2566f301daaf4eadd3dd5f263045f7 248 Pfam PF02674 Colicin V production protein 2 140 9.4E-30 T 28-03-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 APY29_RS05870 296285f6187cd44ca6f269c0987aeb43 97 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 38 94 4.8E-20 T 28-03-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 APY29_RS18880 c126eafa361ffbe828ccbfc08e34b883 69 SUPERFAMILY SSF103088 2 67 1.16E-12 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS18880 c126eafa361ffbe828ccbfc08e34b883 69 Gene3D G3DSA:3.30.1330.60 1 69 3.7E-14 T 28-03-2018 IPR006665 OmpA-like domain APY29_RS02955 b9161de89afcb2912bc764fd49b0fa76 204 Pfam PF03458 UPF0126 domain 7 81 4.8E-20 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 APY29_RS02955 b9161de89afcb2912bc764fd49b0fa76 204 Pfam PF03458 UPF0126 domain 93 164 1.0E-18 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 APY29_RS10690 79e4dbd2b64580bb588008134daaa0db 466 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 51 461 1.0E-175 T 28-03-2018 IPR021204 Integrating conjugative element protein, PFL4711 APY29_RS09025 6b8942df1308a510dc032a7582857eef 162 Pfam PF13827 Domain of unknown function (DUF4189) 58 154 4.6E-21 T 28-03-2018 IPR025240 Domain of unknown function DUF4189 APY29_RS20150 587ac0ae079bdd45a49e534940a6eacf 249 Pfam PF07505 Protein of unknown function (DUF5131) 5 243 1.7E-100 T 28-03-2018 IPR011101 Protein of unknown function DUF5131 APY29_RS19125 ac44255a347ee5632c0b5e11c9c74094 179 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 166 7.0E-27 T 28-03-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase APY29_RS02300 0b365f95390afb3bfe7c5c6dc42ff2dd 120 Gene3D G3DSA:1.20.120.20 2 103 2.1E-4 T 28-03-2018 APY29_RS06255 42affdd99cb0d15b8d2cd8a4dd364255 166 Pfam PF14317 YcxB-like protein 96 155 7.1E-9 T 28-03-2018 IPR025588 YcxB-like protein APY29_RS17055 6114a8081f88aafb7a16fc6aa3434aff 197 SMART SM00974 24 117 1.1E-9 T 28-03-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding APY29_RS18960 57adbf07bb546358ba655f1de56e1c2d 52 SUPERFAMILY SSF54593 1 48 1.11E-9 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS18960 57adbf07bb546358ba655f1de56e1c2d 52 Gene3D G3DSA:3.10.180.10 1 52 1.8E-8 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APY29_RS22910 6cf47d4c361af601ce32fa9c6c52e6f6 369 Pfam PF14315 Domain of unknown function (DUF4380) 38 332 4.2E-130 T 28-03-2018 IPR025488 Protein of unknown function DUF4380 APY29_RS00630 077d298b73f646ea9e87249f03fa5937 131 PIRSF PIRSF009151 1 131 3.5E-66 T 28-03-2018 IPR008497 Protein of unknown function DUF779 APY29_RS00630 077d298b73f646ea9e87249f03fa5937 131 Pfam PF05610 Protein of unknown function (DUF779) 23 116 1.1E-47 T 28-03-2018 IPR008497 Protein of unknown function DUF779 APY29_RS10945 8e8f7db587e0ec2fcc2200a8074d304d 65 Pfam PF04024 PspC domain 6 62 1.8E-19 T 28-03-2018 IPR007168 Phage shock protein, PspC, N-terminal APY29_RS21850 e66097bb6ed8c02e1e24089149cdb2bb 103 Pfam PF12365 Protein of unknown function (DUF3649) 71 98 1.2E-6 T 28-03-2018 IPR022109 Protein of unknown function DUF3649 APY29_RS19780 1a518f39835be96b69795152c5dddf41 549 Gene3D G3DSA:1.20.1250.20 26 221 2.0E-13 T 28-03-2018 APY29_RS19780 1a518f39835be96b69795152c5dddf41 549 SUPERFAMILY SSF103473 504 532 1.83E-18 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS19780 1a518f39835be96b69795152c5dddf41 549 SUPERFAMILY SSF103473 273 444 1.83E-18 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS19780 1a518f39835be96b69795152c5dddf41 549 SUPERFAMILY SSF103473 31 223 1.83E-18 T 28-03-2018 IPR020846 Major facilitator superfamily domain APY29_RS19780 1a518f39835be96b69795152c5dddf41 549 Pfam PF07690 Major Facilitator Superfamily 43 434 1.9E-9 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APY29_RS19780 1a518f39835be96b69795152c5dddf41 549 Gene3D G3DSA:1.20.1250.20 283 540 1.5E-8 T 28-03-2018 APY29_RS18335 1f2346f0fd6de1f52361f14d713f4857 747 Pfam PF07793 Protein of unknown function (DUF1631) 11 736 7.0E-154 T 28-03-2018 IPR012434 Protein of unknown function DUF1631 APY29_RS01820 f7c1ade7a78112b1f66c0d993f055985 101 Pfam PF12686 Protein of unknown function (DUF3800) 5 83 3.5E-7 T 28-03-2018 IPR024524 Protein of unknown function DUF3800 APY29_RS11845 24ee55ce65af8909bfe372fdff89d904 593 Pfam PF11737 Protein of unknown function (DUF3300) 46 294 7.2E-62 T 28-03-2018 IPR021728 Protein of unknown function DUF3300 APY29_RS11300 e5886bd70a74f5f513b4cf3565819668 176 Pfam PF13827 Domain of unknown function (DUF4189) 63 168 2.5E-19 T 28-03-2018 IPR025240 Domain of unknown function DUF4189 APY29_RS07370 0d917ad4fa0e49ffc80375b18f9a1fde 387 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 55 290 2.7E-61 T 28-03-2018 IPR018642 Protein of unknown function DUF2066 APY29_RS11740 83781afa95a2d06a200bacdafaade929 619 Pfam PF09369 Domain of unknown function (DUF1998) 484 584 4.2E-9 T 28-03-2018 IPR018973 DEAD/DEAH-box helicase, putative APY29_RS04395 31bf4c6e0f25457fb1dd31f1f187e65d 155 Pfam PF06271 RDD family 14 144 5.1E-20 T 28-03-2018 IPR010432 RDD APY29_RS11765 fbc95da3f816eda1e8e3341315cd2908 109 Pfam PF16219 Domain of unknown function (DUF4879) 22 109 3.7E-20 T 28-03-2018 IPR032624 Protein of unknown function DUF4879 APY29_RS22880 d745d5a963fb5c2f6ba738502238bcf7 344 Pfam PF14094 Domain of unknown function (DUF4272) 133 340 1.7E-58 T 28-03-2018 IPR025368 Protein of unknown function DUF4272 APY29_RS01240 836eddc1d31914c2be74a20e800a8da3 83 Pfam PF04226 Transglycosylase associated protein 33 79 5.8E-12 T 28-03-2018 IPR007341 Transglycosylase-associated protein GO:0016021 APY29_RS02165 33dae7e4d0ba50fd2d2b68c4b04c7ed9 50 Pfam PF08085 Entericidin EcnA/B family 22 42 5.2E-8 T 28-03-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 APY29_RS02655 9e015e093c882131855177683dbb8760 158 Pfam PF10003 Integral membrane protein (DUF2244) 18 150 1.4E-31 T 28-03-2018 IPR019253 Protein of unknown function DUF2244, transmembrane APY29_RS09370 ac3efd7ddb140ec49a0d0a2aeb0ef030 605 Pfam PF05960 Bacterial protein of unknown function (DUF885) 62 590 2.8E-162 T 28-03-2018 IPR010281 Protein of unknown function DUF885 APY29_RS01955 e7dbadde2c79a340e9d402d46e44cbef 403 Pfam PF05960 Bacterial protein of unknown function (DUF885) 3 391 8.3E-74 T 28-03-2018 IPR010281 Protein of unknown function DUF885 APY29_RS20485 a8a1673df7b4d70f00c457be7e7e0fc2 247 Pfam PF11906 Protein of unknown function (DUF3426) 102 246 2.4E-36 T 28-03-2018 IPR021834 Protein of unknown function DUF3426 APY29_RS16280 643b5220b687500787762b044b5fa1cb 257 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 189 254 1.8E-14 T 28-03-2018 IPR022385 Rhs repeat-associated core GO:0097264 APY29_RS03315 695022884e553bc9b71c693edec68d80 218 Pfam PF11445 Protein of unknown function (DUF2894) 12 190 2.5E-60 T 28-03-2018 IPR021549 Protein of unknown function DUF2894 APY29_RS03565 b7aef3d30bd945f0a523576406b08260 147 Pfam PF07681 DoxX 16 96 1.5E-18 T 28-03-2018 IPR032808 DoxX family APY29_RS20010 437bda5529845c5bf3b4114770e17c35 458 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APY29_RS20010 437bda5529845c5bf3b4114770e17c35 458 Pfam PF00324 Amino acid permease 18 454 5.2E-115 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APY29_RS20010 437bda5529845c5bf3b4114770e17c35 458 PIRSF PIRSF006060 1 455 2.0E-71 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APY29_RS00370 147e8dccb1e1f4c7d059ef450ed786d4 162 Pfam PF13471 Transglutaminase-like superfamily 41 151 2.0E-20 T 28-03-2018 IPR032708 Microcin J25-processing protein McjB, C-terminal APY29_RS20585 70c89606be7aafe89ec8196d42dbf319 136 Pfam PF10825 Protein of unknown function (DUF2752) 40 84 3.6E-18 T 28-03-2018 IPR021215 Protein of unknown function DUF2752 APY29_RS15905 64f0dccc01c0e07f4c85e231e58b2d75 235 Pfam PF06197 Protein of unknown function (DUF998) 31 208 6.0E-10 T 28-03-2018 IPR009339 Protein of unknown function DUF998 APY29_RS15750 132aa2d6e21df4cf743a3a1e5db0b176 148 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 148 3.6E-40 T 28-03-2018 IPR005265 Uncharacterised protein family UPF0093 APY29_RS15750 132aa2d6e21df4cf743a3a1e5db0b176 148 PIRSF PIRSF004638 1 148 9.9E-41 T 28-03-2018 IPR005265 Uncharacterised protein family UPF0093 APY29_RS21080 67d5c0dfabc84f1b1b3231164dce0309 130 TIGRFAM TIGR02558 HrpB2: type III secretion protein HrpB2 12 130 1.9E-43 T 28-03-2018 IPR013391 Type III secretion protein HrpB2 APY29_RS21080 67d5c0dfabc84f1b1b3231164dce0309 130 Pfam PF09487 Bacterial type III secretion protein (HrpB2) 18 130 3.5E-38 T 28-03-2018 IPR013391 Type III secretion protein HrpB2 APY29_RS21830 749c29f11aa1255e05fc3478217d359f 84 Gene3D G3DSA:2.170.15.10 1 55 1.2E-4 T 28-03-2018 APY29_RS17060 74752e392ad247bfde89f0fdc2004858 439 Pfam PF05559 Protein of unknown function (DUF763) 6 348 1.2E-124 T 28-03-2018 IPR008482 Protein of unknown function DUF763 APY29_RS11160 91429cac180dfc65acd0b3374b76ebbe 155 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 136 1.0E-30 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Gene3D G3DSA:3.10.20.90 545 580 0.037 T 28-03-2018 APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Gene3D G3DSA:3.10.20.90 647 681 0.028 T 28-03-2018 APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Gene3D G3DSA:3.10.20.90 409 441 0.42 T 28-03-2018 APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Gene3D G3DSA:3.10.20.90 748 781 0.12 T 28-03-2018 APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Gene3D G3DSA:3.10.20.90 442 475 0.36 T 28-03-2018 APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Gene3D G3DSA:3.10.20.90 476 509 0.055 T 28-03-2018 APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Gene3D G3DSA:3.10.20.90 337 374 0.085 T 28-03-2018 APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Gene3D G3DSA:3.10.20.90 782 817 0.029 T 28-03-2018 APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Gene3D G3DSA:3.10.20.90 510 544 0.048 T 28-03-2018 APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Gene3D G3DSA:3.10.20.90 613 646 0.023 T 28-03-2018 APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Gene3D G3DSA:3.10.20.90 682 714 0.47 T 28-03-2018 APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Gene3D G3DSA:3.10.20.90 375 408 0.4 T 28-03-2018 APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Gene3D G3DSA:3.10.20.90 715 747 0.022 T 28-03-2018 APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Gene3D G3DSA:3.10.20.90 581 612 0.064 T 28-03-2018 APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Gene3D G3DSA:3.40.47.10 252 336 0.049 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Pfam PF03377 TAL effector repeat 356 387 7.5E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Pfam PF03377 TAL effector repeat 662 693 2.7E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Pfam PF03377 TAL effector repeat 492 523 6.2E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Pfam PF03377 TAL effector repeat 424 455 4.1E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Pfam PF03377 TAL effector repeat 628 659 2.7E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Pfam PF03377 TAL effector repeat 560 591 1.1E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Pfam PF03377 TAL effector repeat 696 727 4.1E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Pfam PF03377 TAL effector repeat 730 761 2.7E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Pfam PF03377 TAL effector repeat 594 625 4.2E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Pfam PF03377 TAL effector repeat 390 421 4.1E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Pfam PF03377 TAL effector repeat 288 319 2.7E-16 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Pfam PF03377 TAL effector repeat 322 353 3.2E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Pfam PF03377 TAL effector repeat 764 794 1.2E-14 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Pfam PF03377 TAL effector repeat 526 557 4.2E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Pfam PF03377 TAL effector repeat 797 826 1.7E-12 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Pfam PF03377 TAL effector repeat 833 857 0.04 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS12300 36c2343a90e6a3c40d9c22990b34793f 1094 Pfam PF03377 TAL effector repeat 458 489 4.1E-17 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS04600 4eb7c7cbceb9a5fcef543ad8982b8f23 788 Pfam PF03170 Bacterial cellulose synthase subunit 72 687 5.1E-209 T 28-03-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 APY29_RS04600 4eb7c7cbceb9a5fcef543ad8982b8f23 788 PRINTS PR01440 Cellulose synthase subunit B signature 231 254 9.5E-37 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 APY29_RS04600 4eb7c7cbceb9a5fcef543ad8982b8f23 788 PRINTS PR01440 Cellulose synthase subunit B signature 99 120 9.5E-37 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 APY29_RS04600 4eb7c7cbceb9a5fcef543ad8982b8f23 788 PRINTS PR01440 Cellulose synthase subunit B signature 189 210 9.5E-37 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 APY29_RS04600 4eb7c7cbceb9a5fcef543ad8982b8f23 788 PRINTS PR01440 Cellulose synthase subunit B signature 567 587 9.5E-37 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 APY29_RS04600 4eb7c7cbceb9a5fcef543ad8982b8f23 788 PRINTS PR01440 Cellulose synthase subunit B signature 727 747 9.5E-37 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 APY29_RS04600 4eb7c7cbceb9a5fcef543ad8982b8f23 788 PRINTS PR01440 Cellulose synthase subunit B signature 275 292 9.5E-37 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 APY29_RS04600 4eb7c7cbceb9a5fcef543ad8982b8f23 788 PRINTS PR01440 Cellulose synthase subunit B signature 530 549 9.5E-37 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 APY29_RS04600 4eb7c7cbceb9a5fcef543ad8982b8f23 788 PRINTS PR01440 Cellulose synthase subunit B signature 399 420 9.5E-37 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 APY29_RS17325 f8a94f712e955914671f109f68704a88 58 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 53 2.7E-5 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family APY29_RS14835 ba36d359924132a0a80c17b61815b7fc 317 Pfam PF07920 Protein of unknown function (DUF1684) 174 310 1.2E-42 T 28-03-2018 IPR012467 Protein of unknown function DUF1684 APY29_RS14350 2143cd746a67831758a9ecd583834bd8 240 Gene3D G3DSA:2.40.160.40 22 211 3.0E-4 T 28-03-2018 APY29_RS22995 08553185eb346473f0ef2dc82e5aa489 489 Pfam PF11855 Protein of unknown function (DUF3375) 11 480 6.2E-151 T 28-03-2018 IPR021804 Protein of unknown function DUF3375 APY29_RS14050 b17311529ab8a67fe54352fc19e47abc 204 Pfam PF09335 SNARE associated Golgi protein 55 163 7.7E-8 T 28-03-2018 IPR032816 SNARE associated Golgi protein APY29_RS03615 de6b2ef5f64e18c7a5b249ebcb60410c 87 Pfam PF11730 Protein of unknown function (DUF3297) 6 76 1.4E-36 T 28-03-2018 IPR021724 Protein of unknown function DUF3297 APY29_RS12135 6b13e5eb6dbd3f80b2f0c3f87eabb0ce 120 Gene3D G3DSA:3.10.150.10 33 117 0.0059 T 28-03-2018 APY29_RS15395 910940242fbcd32d885068a99dd2dff7 263 Pfam PF05433 Glycine zipper 2TM domain 103 143 1.0E-9 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 APY29_RS23520 eb06f1614a6d901a5ac1cdf70c9b12e8 177 Pfam PF03377 TAL effector repeat 95 124 1.0E-10 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS23520 eb06f1614a6d901a5ac1cdf70c9b12e8 177 Pfam PF03377 TAL effector repeat 131 155 0.028 T 28-03-2018 IPR005042 TAL effector repeat APY29_RS08355 56471dae9bfb95ae3ed9213a286b00ad 155 Pfam PF09685 Domain of unknown function (DUF4870) 49 154 1.2E-30 T 28-03-2018 IPR019109 Protein of unknown function DUF4870 APY29_RS11230 af9f9f62869424bde9418cb816f4112e 85 SUPERFAMILY SSF53850 5 82 4.71E-6 T 28-03-2018 APY29_RS11230 af9f9f62869424bde9418cb816f4112e 85 Gene3D G3DSA:3.40.190.10 1 59 2.7E-6 T 28-03-2018 APY29_RS15860 7097a16c58245674bcf8baa29698a5ed 281 Pfam PF10099 Anti-sigma-K factor rskA 70 272 2.9E-25 T 28-03-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 APY29_RS05600 f492af637d80803a569a2eab67579583 145 Pfam PF11162 Protein of unknown function (DUF2946) 14 142 5.1E-5 T 28-03-2018 IPR021333 Protein of unknown function DUF2946 APY29_RS15885 6d2d36d5ade6acdf2ddc06d07d74012f 181 Pfam PF11086 Protein of unknown function (DUF2878) 4 158 6.1E-39 T 28-03-2018 IPR021306 Protein of unknown function DUF2878 APY29_RS09920 1046253bb6836ea0abd6c254a11986d9 114 Pfam PF11743 Protein of unknown function (DUF3301) 5 97 1.2E-28 T 28-03-2018 IPR021732 Protein of unknown function DUF3301 APY29_RS18295 1f80d6cce80bb5024b382e0837bee55a 101 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 8 90 9.4E-29 T 28-03-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 APY29_RS13060 09c23e97e163a5c43dc7b8657d15feb1 246 Pfam PF01618 MotA/TolQ/ExbB proton channel family 103 219 1.9E-24 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APY29_RS16800 785d7809868e7f614a97745760e15860 58 Pfam PF13783 Domain of unknown function (DUF4177) 5 57 5.4E-8 T 28-03-2018 IPR025234 Protein of unknown function DUF4177 APY29_RS11610 0fd4b15ab55be8ef5b12d4a3a89da303 120 Pfam PF11284 Protein of unknown function (DUF3085) 21 110 3.0E-33 T 28-03-2018 IPR021436 Protein of unknown function DUF3085 APY29_RS01755 09800b726180d79c51e16cb2925f13a1 347 Pfam PF04332 Protein of unknown function (DUF475) 49 339 3.9E-129 T 28-03-2018 IPR007427 Protein of unknown function DUF475 APY29_RS22565 2173844ae128c4c5b893142b22b33228 261 Pfam PF01863 Protein of unknown function DUF45 41 245 8.2E-47 T 28-03-2018 IPR002725 Protein of unknown function DUF45 APY29_RS22815 b5b83e4d2b4f68000c16af09b165ac82 72 Pfam PF04325 Protein of unknown function (DUF465) 19 63 4.6E-13 T 28-03-2018 IPR007420 Protein of unknown function DUF465 APY29_RS16875 d3ed6c51ac82674183357973d8999785 576 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 71 202 2.7E-17 T 28-03-2018 APY29_RS03105 ecbf350ca5e290db8c5a8d5cd78b36f7 158 Pfam PF03703 Bacterial PH domain 71 147 3.0E-15 T 28-03-2018 IPR005182 Domain of unknown function DUF304 APY29_RS01480 49a326af6d779f2fbf543648cd09caca 81 Pfam PF05488 PAAR motif 4 71 3.3E-25 T 28-03-2018 IPR008727 PAAR motif APY29_RS18730 d6e2ee8116e4cfc874f7826ce302d05e 297 Pfam PF04536 TPM domain 36 158 5.1E-36 T 28-03-2018 IPR007621 TPM domain APY29_RS11950 80b20a1ec5f22986c16ea4f21228d0d7 369 Pfam PF02486 Replication initiation factor 167 325 6.9E-26 T 28-03-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270