locus-tag class description BJD11_RS00085 PF00487 Fatty acid desaturase BJD11_RS00665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BJD11_RS00665 PF07497 Rho termination factor, RNA-binding domain BJD11_RS00665 PF07498 Rho termination factor, N-terminal domain BJD11_RS00790 PF00106 short chain dehydrogenase BJD11_RS01185 PF07690 Major Facilitator Superfamily BJD11_RS01265 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BJD11_RS01265 PF14850 DNA-binding domain of Proline dehydrogenase BJD11_RS01265 PF01619 Proline dehydrogenase BJD11_RS01265 PF00171 Aldehyde dehydrogenase family BJD11_RS01430 PF07063 Domain of unknown function (DUF1338) BJD11_RS01455 PF00873 AcrB/AcrD/AcrF family BJD11_RS01520 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) BJD11_RS01590 PF00270 DEAD/DEAH box helicase BJD11_RS01590 PF00271 Helicase conserved C-terminal domain BJD11_RS01590 PF17764 3′ DNA-binding domain (3′BD) BJD11_RS01590 PF18074 Primosomal protein N C-terminal domain BJD11_RS01590 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BJD11_RS01595 PF00270 DEAD/DEAH box helicase BJD11_RS01595 PF17764 3′ DNA-binding domain (3′BD) BJD11_RS01595 PF18074 Primosomal protein N C-terminal domain BJD11_RS01595 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BJD11_RS01595 PF00271 Helicase conserved C-terminal domain BJD11_RS01625 PF01343 Peptidase family S49 BJD11_RS01715 PF02911 Formyl transferase, C-terminal domain BJD11_RS01715 PF00551 Formyl transferase BJD11_RS01805 PF08521 Two-component sensor kinase N-terminal BJD11_RS01805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS01805 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS01930 PF13335 Magnesium chelatase, subunit ChlI C-terminal BJD11_RS01930 PF01078 Magnesium chelatase, subunit ChlI BJD11_RS02005 PF08521 Two-component sensor kinase N-terminal BJD11_RS02005 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS02005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS02155 PF13335 Magnesium chelatase, subunit ChlI C-terminal BJD11_RS02155 PF01078 Magnesium chelatase, subunit ChlI BJD11_RS02220 PF00975 Thioesterase domain BJD11_RS02220 PF00550 Phosphopantetheine attachment site BJD11_RS02220 PF00501 AMP-binding enzyme BJD11_RS02220 PF13193 AMP-binding enzyme C-terminal domain BJD11_RS02220 PF00668 Condensation domain BJD11_RS02255 PF03485 Arginyl tRNA synthetase N terminal domain BJD11_RS02255 PF05746 DALR anticodon binding domain BJD11_RS02255 PF00750 tRNA synthetases class I (R) BJD11_RS02270 PF08521 Two-component sensor kinase N-terminal BJD11_RS02270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS02270 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS02275 PF00072 Response regulator receiver domain BJD11_RS02275 PF00486 Transcriptional regulatory protein, C terminal BJD11_RS02280 PF08338 Domain of unknown function (DUF1731) BJD11_RS02280 PF01370 NAD dependent epimerase/dehydratase family BJD11_RS02315 PF01139 tRNA-splicing ligase RtcB BJD11_RS02335 PF00440 Bacterial regulatory proteins, tetR family BJD11_RS02340 PF00970 Oxidoreductase FAD-binding domain BJD11_RS02340 PF00111 2Fe-2S iron-sulfur cluster binding domain BJD11_RS02340 PF00175 Oxidoreductase NAD-binding domain BJD11_RS02345 PF00487 Fatty acid desaturase BJD11_RS02350 PF12792 CSS motif domain associated with EAL BJD11_RS02350 PF00563 EAL domain BJD11_RS02365 PF13335 Magnesium chelatase, subunit ChlI C-terminal BJD11_RS02365 PF01078 Magnesium chelatase, subunit ChlI BJD11_RS02370 PF04380 Membrane fusogenic activity BJD11_RS02375 PF00543 Nitrogen regulatory protein P-II BJD11_RS02385 PF00963 Cohesin domain BJD11_RS02385 PF00041 Fibronectin type III domain BJD11_RS02385 PF02838 Glycosyl hydrolase family 20, domain 2 BJD11_RS02385 PF07555 beta-N-acetylglucosaminidase BJD11_RS02385 PF00754 F5/8 type C domain BJD11_RS02405 PF17284 Spermidine synthase tetramerisation domain BJD11_RS02410 PF17810 Arginine decarboxylase helical bundle domain BJD11_RS02410 PF17944 Arginine decarboxylase C-terminal helical extension BJD11_RS02410 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BJD11_RS02420 PF03033 Glycosyltransferase family 28 N-terminal domain BJD11_RS02430 PF00106 short chain dehydrogenase BJD11_RS02445 PF00750 tRNA synthetases class I (R) BJD11_RS02445 PF03485 Arginyl tRNA synthetase N terminal domain BJD11_RS02445 PF05746 DALR anticodon binding domain BJD11_RS02450 PF04002 RadC-like JAB domain BJD11_RS02455 PF02441 Flavoprotein BJD11_RS02455 PF04127 DNA / pantothenate metabolism flavoprotein BJD11_RS02460 PF00692 dUTPase BJD11_RS02465 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BJD11_RS02465 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BJD11_RS02465 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BJD11_RS02465 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BJD11_RS02480 PF00535 Glycosyl transferase family 2 BJD11_RS02485 PF01370 NAD dependent epimerase/dehydratase family BJD11_RS02500 PF02195 ParB-like nuclease domain BJD11_RS02500 PF17762 HTH domain found in ParB protein BJD11_RS02505 PF13614 AAA domain BJD11_RS02515 PF00156 Phosphoribosyl transferase domain BJD11_RS02520 PF03372 Endonuclease/Exonuclease/phosphatase family BJD11_RS02525 PF07690 Major Facilitator Superfamily BJD11_RS02535 PF03702 Anhydro-N-acetylmuramic acid kinase BJD11_RS02540 PF04225 Opacity-associated protein A LysM-like domain BJD11_RS02540 PF01551 Peptidase family M23 BJD11_RS02545 PF00579 tRNA synthetases class I (W and Y) BJD11_RS02575 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BJD11_RS02575 PF14850 DNA-binding domain of Proline dehydrogenase BJD11_RS02575 PF01619 Proline dehydrogenase BJD11_RS02575 PF00171 Aldehyde dehydrogenase family BJD11_RS02585 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BJD11_RS02585 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BJD11_RS02590 PF00115 Cytochrome C and Quinol oxidase polypeptide I BJD11_RS02600 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BJD11_RS02605 PF00510 Cytochrome c oxidase subunit III BJD11_RS02630 PF01040 UbiA prenyltransferase family BJD11_RS02640 PF13593 SBF-like CPA transporter family (DUF4137) BJD11_RS02645 PF01807 CHC2 zinc finger BJD11_RS02645 PF08275 DNA primase catalytic core, N-terminal domain BJD11_RS02645 PF08278 DNA primase DnaG DnaB-binding BJD11_RS02645 PF10410 DnaB-helicase binding domain of primase BJD11_RS02650 PF03631 Virulence factor BrkB BJD11_RS02660 PF09424 Yqey-like protein BJD11_RS02665 PF01165 Ribosomal protein S21 BJD11_RS02670 PF00814 Glycoprotease family BJD11_RS02675 PF02152 Dihydroneopterin aldolase BJD11_RS02680 PF01915 Glycosyl hydrolase family 3 C-terminal domain BJD11_RS02680 PF00933 Glycosyl hydrolase family 3 N terminal domain BJD11_RS02680 PF14310 Fibronectin type III-like domain BJD11_RS02685 PF07995 Glucose / Sorbosone dehydrogenase BJD11_RS02690 PF05360 yiaA/B two helix domain BJD11_RS02705 PF13520 Amino acid permease BJD11_RS02715 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BJD11_RS02715 PF13378 Enolase C-terminal domain-like BJD11_RS02725 PF01510 N-acetylmuramoyl-L-alanine amidase BJD11_RS02730 PF01427 D-ala-D-ala dipeptidase BJD11_RS02775 PF07063 Domain of unknown function (DUF1338) BJD11_RS02780 PF00873 AcrB/AcrD/AcrF family BJD11_RS02785 PF00873 AcrB/AcrD/AcrF family BJD11_RS02790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD11_RS02795 PF01546 Peptidase family M20/M25/M40 BJD11_RS02795 PF07687 Peptidase dimerisation domain BJD11_RS02800 PF14489 QueF-like protein BJD11_RS02800 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BJD11_RS02805 PF01476 LysM domain BJD11_RS02805 PF04972 BON domain BJD11_RS02815 PF03971 Monomeric isocitrate dehydrogenase BJD11_RS02825 PF03466 LysR substrate binding domain BJD11_RS02825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS02830 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) BJD11_RS02840 PF07498 Rho termination factor, N-terminal domain BJD11_RS02840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BJD11_RS02840 PF07497 Rho termination factor, RNA-binding domain BJD11_RS02845 PF00085 Thioredoxin BJD11_RS02850 PF12300 ATP-dependent RNA helicase RhlB BJD11_RS02850 PF00270 DEAD/DEAH box helicase BJD11_RS02850 PF00271 Helicase conserved C-terminal domain BJD11_RS02855 PF00005 ABC transporter BJD11_RS02860 PF18075 FtsX extracellular domain BJD11_RS02865 PF00072 Response regulator receiver domain BJD11_RS02870 PF03167 Uracil DNA glycosylase superfamily BJD11_RS02875 PF04542 Sigma-70 region 2 BJD11_RS02875 PF04545 Sigma-70, region 4 BJD11_RS02880 PF03458 UPF0126 domain BJD11_RS02885 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD11_RS02905 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BJD11_RS02905 PF17764 3′ DNA-binding domain (3′BD) BJD11_RS02905 PF00270 DEAD/DEAH box helicase BJD11_RS02905 PF18074 Primosomal protein N C-terminal domain BJD11_RS02905 PF00271 Helicase conserved C-terminal domain BJD11_RS02925 PF01554 MatE BJD11_RS02930 PF01343 Peptidase family S49 BJD11_RS02960 PF01300 Telomere recombination BJD11_RS02965 PF13368 Topoisomerase C-terminal repeat BJD11_RS02965 PF01751 Toprim domain BJD11_RS02965 PF01131 DNA topoisomerase BJD11_RS02975 PF00114 Pilin (bacterial filament) BJD11_RS02975 PF07963 Prokaryotic N-terminal methylation motif BJD11_RS02980 PF04361 Protein of unknown function (DUF494) BJD11_RS02985 PF02481 DNA recombination-mediator protein A BJD11_RS02985 PF17782 DprA winged helix domain BJD11_RS02990 PF01476 LysM domain BJD11_RS02995 PF01327 Polypeptide deformylase BJD11_RS03000 PF02911 Formyl transferase, C-terminal domain BJD11_RS03000 PF00551 Formyl transferase BJD11_RS03005 PF01029 NusB family BJD11_RS03005 PF01189 16S rRNA methyltransferase RsmB/F BJD11_RS03020 PF00535 Glycosyl transferase family 2 BJD11_RS03040 PF00925 GTP cyclohydrolase II BJD11_RS03055 PF03279 Bacterial lipid A biosynthesis acyltransferase BJD11_RS03060 PF02580 D-Tyr-tRNA(Tyr) deacylase BJD11_RS03065 PF04546 Sigma-70, non-essential region BJD11_RS03065 PF03979 Sigma-70 factor, region 1.1 BJD11_RS03065 PF04539 Sigma-70 region 3 BJD11_RS03065 PF00140 Sigma-70 factor, region 1.2 BJD11_RS03065 PF04542 Sigma-70 region 2 BJD11_RS03065 PF04545 Sigma-70, region 4 BJD11_RS03115 PF00717 Peptidase S24-like BJD11_RS03140 PF03466 LysR substrate binding domain BJD11_RS03140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS03150 PF00557 Metallopeptidase family M24 BJD11_RS03160 PF00654 Voltage gated chloride channel BJD11_RS03165 PF00916 Sulfate permease family BJD11_RS03165 PF01740 STAS domain BJD11_RS03195 PF02525 Flavodoxin-like fold BJD11_RS03200 PF03466 LysR substrate binding domain BJD11_RS03200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS03220 PF01042 Endoribonuclease L-PSP BJD11_RS03225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS03225 PF03466 LysR substrate binding domain BJD11_RS03235 PF00005 ABC transporter BJD11_RS03250 PF00593 TonB dependent receptor BJD11_RS03250 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS03295 PF08240 Alcohol dehydrogenase GroES-like domain BJD11_RS03295 PF13823 Alcohol dehydrogenase GroES-associated BJD11_RS03295 PF00107 Zinc-binding dehydrogenase BJD11_RS03310 PF00664 ABC transporter transmembrane region BJD11_RS03310 PF00005 ABC transporter BJD11_RS03320 PF03275 UDP-galactopyranose mutase BJD11_RS03330 PF16363 GDP-mannose 4,6 dehydratase BJD11_RS03350 PF02322 Cytochrome bd terminal oxidase subunit II BJD11_RS03355 PF01654 Cytochrome bd terminal oxidase subunit I BJD11_RS03370 PF02954 Bacterial regulatory protein, Fis family BJD11_RS03370 PF00072 Response regulator receiver domain BJD11_RS03370 PF00158 Sigma-54 interaction domain BJD11_RS03385 PF08448 PAS fold BJD11_RS03385 PF01339 CheB methylesterase BJD11_RS03385 PF01739 CheR methyltransferase, SAM binding domain BJD11_RS03385 PF03705 CheR methyltransferase, all-alpha domain BJD11_RS03400 PF05067 Manganese containing catalase BJD11_RS03405 PF05974 Domain of unknown function (DUF892) BJD11_RS03425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS03425 PF06580 Histidine kinase BJD11_RS03425 PF00672 HAMP domain BJD11_RS03425 PF02743 Cache domain BJD11_RS03430 PF00072 Response regulator receiver domain BJD11_RS03430 PF04397 LytTr DNA-binding domain BJD11_RS03440 PF13520 Amino acid permease BJD11_RS03455 PF05649 Peptidase family M13 BJD11_RS03455 PF01431 Peptidase family M13 BJD11_RS03475 PF03358 NADPH-dependent FMN reductase BJD11_RS03480 PF03466 LysR substrate binding domain BJD11_RS03480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS03485 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BJD11_RS03495 PF03167 Uracil DNA glycosylase superfamily BJD11_RS03500 PF02469 Fasciclin domain BJD11_RS03510 PF00999 Sodium/hydrogen exchanger family BJD11_RS03515 PF00005 ABC transporter BJD11_RS03520 PF01061 ABC-2 type transporter BJD11_RS03545 PF13677 Membrane MotB of proton-channel complex MotA/MotB BJD11_RS03545 PF00691 OmpA family BJD11_RS03550 PF01618 MotA/TolQ/ExbB proton channel family BJD11_RS03560 PF01641 SelR domain BJD11_RS03570 PF01037 Lrp/AsnC ligand binding domain BJD11_RS03575 PF01266 FAD dependent oxidoreductase BJD11_RS03580 PF00842 Alanine racemase, C-terminal domain BJD11_RS03580 PF01168 Alanine racemase, N-terminal domain BJD11_RS03600 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS03600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS03600 PF00989 PAS fold BJD11_RS03610 PF07995 Glucose / Sorbosone dehydrogenase BJD11_RS03625 PF05175 Methyltransferase small domain BJD11_RS03625 PF08468 Methyltransferase small domain N-terminal BJD11_RS03630 PF00849 RNA pseudouridylate synthase BJD11_RS03630 PF01479 S4 domain BJD11_RS03635 PF13419 Haloacid dehalogenase-like hydrolase BJD11_RS03660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS03660 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS03660 PF18415 Histidine kinase receptor ArcB trans-membrane domain BJD11_RS03660 PF01627 Hpt domain BJD11_RS03660 PF00072 Response regulator receiver domain BJD11_RS03660 PF00989 PAS fold BJD11_RS03670 PF04461 Protein of unknown function (DUF520) BJD11_RS03675 PF00892 EamA-like transporter family BJD11_RS03680 PF09383 NIL domain BJD11_RS03680 PF00005 ABC transporter BJD11_RS03685 PF00528 Binding-protein-dependent transport system inner membrane component BJD11_RS03690 PF03180 NLPA lipoprotein BJD11_RS03755 PF02817 e3 binding domain BJD11_RS03755 PF00364 Biotin-requiring enzyme BJD11_RS03755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BJD11_RS03765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BJD11_RS03765 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD11_RS03785 PF00119 ATP synthase A chain BJD11_RS03790 PF00137 ATP synthase subunit C BJD11_RS03795 PF00430 ATP synthase B/B' CF(0) BJD11_RS03800 PF00213 ATP synthase delta (OSCP) subunit BJD11_RS03805 PF02874 ATP synthase alpha/beta family, beta-barrel domain BJD11_RS03805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BJD11_RS03805 PF00306 ATP synthase alpha/beta chain, C terminal domain BJD11_RS03810 PF00231 ATP synthase BJD11_RS03815 PF02874 ATP synthase alpha/beta family, beta-barrel domain BJD11_RS03815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BJD11_RS03820 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BJD11_RS03820 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BJD11_RS03825 PF01817 Chorismate mutase type II BJD11_RS03835 PF00132 Bacterial transferase hexapeptide (six repeats) BJD11_RS03835 PF12804 MobA-like NTP transferase domain BJD11_RS03835 PF14602 Hexapeptide repeat of succinyl-transferase BJD11_RS03840 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS03840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS03845 PF02954 Bacterial regulatory protein, Fis family BJD11_RS03845 PF00072 Response regulator receiver domain BJD11_RS03845 PF00158 Sigma-54 interaction domain BJD11_RS03855 PF02687 FtsX-like permease family BJD11_RS03855 PF12704 MacB-like periplasmic core domain BJD11_RS03855 PF00005 ABC transporter BJD11_RS03860 PF12704 MacB-like periplasmic core domain BJD11_RS03860 PF02687 FtsX-like permease family BJD11_RS03865 PF00005 ABC transporter BJD11_RS03870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD11_RS03875 PF01380 SIS domain BJD11_RS03900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BJD11_RS03905 PF05275 Copper resistance protein B precursor (CopB) BJD11_RS03910 PF07732 Multicopper oxidase BJD11_RS03910 PF00394 Multicopper oxidase BJD11_RS03910 PF07731 Multicopper oxidase BJD11_RS03925 PF01432 Peptidase family M3 BJD11_RS03935 PF02801 Beta-ketoacyl synthase, C-terminal domain BJD11_RS03935 PF00109 Beta-ketoacyl synthase, N-terminal domain BJD11_RS03940 PF07977 FabA-like domain BJD11_RS03950 PF00817 impB/mucB/samB family BJD11_RS03950 PF11799 impB/mucB/samB family C-terminal domain BJD11_RS03955 PF13419 Haloacid dehalogenase-like hydrolase BJD11_RS03965 PF13185 GAF domain BJD11_RS03980 PF01242 6-pyruvoyl tetrahydropterin synthase BJD11_RS03985 PF00270 DEAD/DEAH box helicase BJD11_RS03985 PF00271 Helicase conserved C-terminal domain BJD11_RS04000 PF02798 Glutathione S-transferase, N-terminal domain BJD11_RS04000 PF14497 Glutathione S-transferase, C-terminal domain BJD11_RS04005 PF00437 Type II/IV secretion system protein BJD11_RS04025 PF00291 Pyridoxal-phosphate dependent enzyme BJD11_RS04025 PF00571 CBS domain BJD11_RS04030 PF01053 Cys/Met metabolism PLP-dependent enzyme BJD11_RS04050 PF00005 ABC transporter BJD11_RS04055 PF00069 Protein kinase domain BJD11_RS04055 PF13847 Methyltransferase domain BJD11_RS04060 PF00534 Glycosyl transferases group 1 BJD11_RS04060 PF13477 Glycosyl transferase 4-like BJD11_RS04065 PF16363 GDP-mannose 4,6 dehydratase BJD11_RS04070 PF16363 GDP-mannose 4,6 dehydratase BJD11_RS04090 PF00535 Glycosyl transferase family 2 BJD11_RS04095 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BJD11_RS04100 PF00766 Electron transfer flavoprotein FAD-binding domain BJD11_RS04100 PF01012 Electron transfer flavoprotein domain BJD11_RS04105 PF01012 Electron transfer flavoprotein domain BJD11_RS04110 PF16363 GDP-mannose 4,6 dehydratase BJD11_RS04115 PF00483 Nucleotidyl transferase BJD11_RS04120 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BJD11_RS04125 PF04321 RmlD substrate binding domain BJD11_RS04130 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BJD11_RS04130 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BJD11_RS04130 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BJD11_RS04135 PF01050 Mannose-6-phosphate isomerase BJD11_RS04135 PF00483 Nucleotidyl transferase BJD11_RS04140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BJD11_RS04140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BJD11_RS04140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BJD11_RS04140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BJD11_RS04145 PF01144 Coenzyme A transferase BJD11_RS04150 PF01144 Coenzyme A transferase BJD11_RS04175 PF03886 ABC-type transport auxiliary lipoprotein component BJD11_RS04175 PF02470 MlaD protein BJD11_RS04180 PF00005 ABC transporter BJD11_RS04185 PF02405 Permease MlaE BJD11_RS04195 PF00816 H-NS histone family BJD11_RS04200 PF04073 Aminoacyl-tRNA editing domain BJD11_RS04200 PF03129 Anticodon binding domain BJD11_RS04200 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BJD11_RS04210 PF01066 CDP-alcohol phosphatidyltransferase BJD11_RS04225 PF00544 Pectate lyase BJD11_RS04230 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BJD11_RS04230 PF01464 Transglycosylase SLT domain BJD11_RS04235 PF00593 TonB dependent receptor BJD11_RS04235 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS04240 PF08264 Anticodon-binding domain of tRNA BJD11_RS04240 PF10458 Valyl tRNA synthetase tRNA binding arm BJD11_RS04240 PF00133 tRNA synthetases class I (I, L, M and V) BJD11_RS04255 PF02789 Cytosol aminopeptidase family, N-terminal domain BJD11_RS04255 PF00883 Cytosol aminopeptidase family, catalytic domain BJD11_RS04265 PF03739 Lipopolysaccharide export system permease LptF/LptG BJD11_RS04280 PF00589 Phage integrase family BJD11_RS04280 PF02899 Phage integrase, N-terminal SAM-like domain BJD11_RS04290 PF13098 Thioredoxin-like domain BJD11_RS04290 PF10411 Disulfide bond isomerase protein N-terminus BJD11_RS04305 PF13018 Extended Signal Peptide of Type V secretion system BJD11_RS04305 PF03895 YadA-like membrane anchor domain BJD11_RS04305 PF05658 Head domain of trimeric autotransporter adhesin BJD11_RS04305 PF05662 Coiled stalk of trimeric autotransporter adhesin BJD11_RS04310 PF04151 Bacterial pre-peptidase C-terminal domain BJD11_RS04310 PF00082 Subtilase family BJD11_RS04315 PF13018 Extended Signal Peptide of Type V secretion system BJD11_RS04315 PF05662 Coiled stalk of trimeric autotransporter adhesin BJD11_RS04315 PF03895 YadA-like membrane anchor domain BJD11_RS04315 PF05658 Head domain of trimeric autotransporter adhesin BJD11_RS04320 PF04151 Bacterial pre-peptidase C-terminal domain BJD11_RS04320 PF00082 Subtilase family BJD11_RS04325 PF00437 Type II/IV secretion system protein BJD11_RS04325 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BJD11_RS04335 PF00482 Type II secretion system (T2SS), protein F BJD11_RS04340 PF08334 Type II secretion system (T2SS), protein G BJD11_RS04345 PF12019 Type II transport protein GspH BJD11_RS04350 PF07963 Prokaryotic N-terminal methylation motif BJD11_RS04360 PF03934 Type II secretion system (T2SS), protein K BJD11_RS04365 PF05137 Fimbrial assembly protein (PilN) BJD11_RS04370 PF10741 Type II secretion system (T2SS), protein M subtype b BJD11_RS04380 PF00263 Bacterial type II and III secretion system protein BJD11_RS04380 PF03958 Bacterial type II/III secretion system short domain BJD11_RS04390 PF00392 Bacterial regulatory proteins, gntR family BJD11_RS04390 PF07702 UTRA domain BJD11_RS04400 PF00593 TonB dependent receptor BJD11_RS04400 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS04440 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BJD11_RS04440 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BJD11_RS04460 PF03170 Bacterial cellulose synthase subunit BJD11_RS04465 PF01270 Glycosyl hydrolases family 8 BJD11_RS04470 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) BJD11_RS04490 PF03960 ArsC family BJD11_RS04500 PF01327 Polypeptide deformylase BJD11_RS04505 PF02645 Uncharacterised protein, DegV family COG1307 BJD11_RS04530 PF01979 Amidohydrolase family BJD11_RS04535 PF01979 Amidohydrolase family BJD11_RS04550 PF00462 Glutaredoxin BJD11_RS04555 PF01522 Polysaccharide deacetylase BJD11_RS04570 PF00155 Aminotransferase class I and II BJD11_RS04575 PF03193 RsgA GTPase BJD11_RS04590 PF00128 Alpha amylase, catalytic domain BJD11_RS04605 PF00356 Bacterial regulatory proteins, lacI family BJD11_RS04610 PF00106 short chain dehydrogenase BJD11_RS04615 PF03600 Citrate transporter BJD11_RS04630 PF00072 Response regulator receiver domain BJD11_RS04630 PF00486 Transcriptional regulatory protein, C terminal BJD11_RS04635 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS04635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS04635 PF08521 Two-component sensor kinase N-terminal BJD11_RS04645 PF00072 Response regulator receiver domain BJD11_RS04645 PF00196 Bacterial regulatory proteins, luxR family BJD11_RS04660 PF00248 Aldo/keto reductase family BJD11_RS04665 PF03466 LysR substrate binding domain BJD11_RS04665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS04675 PF07690 Major Facilitator Superfamily BJD11_RS04685 PF02743 Cache domain BJD11_RS04685 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS04685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS04695 PF00375 Sodium:dicarboxylate symporter family BJD11_RS04700 PF00390 Malic enzyme, N-terminal domain BJD11_RS04700 PF03949 Malic enzyme, NAD binding domain BJD11_RS04700 PF01515 Phosphate acetyl/butaryl transferase BJD11_RS04725 PF03279 Bacterial lipid A biosynthesis acyltransferase BJD11_RS04735 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BJD11_RS04740 PF02321 Outer membrane efflux protein BJD11_RS04755 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS04760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS04765 PF00330 Aconitase family (aconitate hydratase) BJD11_RS04770 PF00694 Aconitase C-terminal domain BJD11_RS04775 PF00180 Isocitrate/isopropylmalate dehydrogenase BJD11_RS04780 PF08502 LeuA allosteric (dimerisation) domain BJD11_RS04780 PF00682 HMGL-like BJD11_RS04785 PF00291 Pyridoxal-phosphate dependent enzyme BJD11_RS04795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BJD11_RS04795 PF00205 Thiamine pyrophosphate enzyme, central domain BJD11_RS04795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BJD11_RS04800 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BJD11_RS04800 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BJD11_RS04810 PF02203 Tar ligand binding domain homologue BJD11_RS04810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS04810 PF00672 HAMP domain BJD11_RS04815 PF00593 TonB dependent receptor BJD11_RS04815 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS04825 PF13667 ThiC-associated domain BJD11_RS04825 PF01964 Radical SAM ThiC family BJD11_RS04830 PF00486 Transcriptional regulatory protein, C terminal BJD11_RS04830 PF18500 CadC C-terminal domain 1 BJD11_RS04835 PF12833 Helix-turn-helix domain BJD11_RS04840 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS04840 PF00593 TonB dependent receptor BJD11_RS04850 PF00719 Inorganic pyrophosphatase BJD11_RS04860 PF03030 Inorganic H+ pyrophosphatase BJD11_RS04885 PF04610 TrbL/VirB6 plasmid conjugal transfer protein BJD11_RS04895 PF01527 Transposase BJD11_RS04900 PF13276 HTH-like domain BJD11_RS04900 PF13683 Integrase core domain BJD11_RS04915 PF04610 TrbL/VirB6 plasmid conjugal transfer protein BJD11_RS04935 PF04610 TrbL/VirB6 plasmid conjugal transfer protein BJD11_RS04945 PF00365 Phosphofructokinase BJD11_RS04955 PF08245 Mur ligase middle domain BJD11_RS04955 PF02875 Mur ligase family, glutamate ligase domain BJD11_RS04955 PF01225 Mur ligase family, catalytic domain BJD11_RS04965 PF01062 Bestrophin, RFP-TM, chloride channel BJD11_RS04970 PF01569 PAP2 superfamily BJD11_RS04985 PF00520 Ion transport protein BJD11_RS04985 PF00027 Cyclic nucleotide-binding domain BJD11_RS04990 PF00202 Aminotransferase class-III BJD11_RS05005 PF01593 Flavin containing amine oxidoreductase BJD11_RS05010 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BJD11_RS05010 PF00034 Cytochrome c BJD11_RS05020 PF00155 Aminotransferase class I and II BJD11_RS05025 PF00127 Copper binding proteins, plastocyanin/azurin family BJD11_RS05030 PF00196 Bacterial regulatory proteins, luxR family BJD11_RS05030 PF17874 MalT-like TPR region BJD11_RS05040 PF00202 Aminotransferase class-III BJD11_RS05060 PF02581 Thiamine monophosphate synthase BJD11_RS05065 PF00301 Rubredoxin BJD11_RS05070 PF13369 Transglutaminase-like superfamily BJD11_RS05080 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BJD11_RS05090 PF01812 5-formyltetrahydrofolate cyclo-ligase family BJD11_RS05100 PF05164 Cell division protein ZapA BJD11_RS05110 PF03695 Uncharacterised protein family (UPF0149) BJD11_RS05115 PF00557 Metallopeptidase family M24 BJD11_RS05115 PF05195 Aminopeptidase P, N-terminal domain BJD11_RS05125 PF00557 Metallopeptidase family M24 BJD11_RS05140 PF04055 Radical SAM superfamily BJD11_RS05140 PF06969 HemN C-terminal domain BJD11_RS05145 PF01725 Ham1 family BJD11_RS05155 PF03725 3' exoribonuclease family, domain 2 BJD11_RS05155 PF01138 3' exoribonuclease family, domain 1 BJD11_RS05160 PF08340 Domain of unknown function (DUF1732) BJD11_RS05160 PF03755 YicC-like family, N-terminal region BJD11_RS05165 PF00625 Guanylate kinase BJD11_RS05170 PF01192 RNA polymerase Rpb6 BJD11_RS05175 PF04607 Region found in RelA / SpoT proteins BJD11_RS05175 PF02824 TGS domain BJD11_RS05175 PF13291 ACT domain BJD11_RS05180 PF01042 Endoribonuclease L-PSP BJD11_RS05185 PF17191 RecG wedge domain BJD11_RS05185 PF00270 DEAD/DEAH box helicase BJD11_RS05185 PF00271 Helicase conserved C-terminal domain BJD11_RS05190 PF01156 Inosine-uridine preferring nucleoside hydrolase BJD11_RS05195 PF01197 Ribosomal protein L31 BJD11_RS05200 PF00285 Citrate synthase, C-terminal domain BJD11_RS05215 PF17092 Penicillin-binding protein OB-like domain BJD11_RS05215 PF00912 Transglycosylase BJD11_RS05215 PF00905 Penicillin binding protein transpeptidase domain BJD11_RS05220 PF11104 Type IV pilus assembly protein PilM; BJD11_RS05225 PF05137 Fimbrial assembly protein (PilN) BJD11_RS05230 PF04350 Pilus assembly protein, PilO BJD11_RS05235 PF04351 Pilus assembly protein, PilP BJD11_RS05240 PF07660 Secretin and TonB N terminus short domain BJD11_RS05240 PF03958 Bacterial type II/III secretion system short domain BJD11_RS05240 PF11741 AMIN domain BJD11_RS05240 PF00263 Bacterial type II and III secretion system protein BJD11_RS05245 PF07726 ATPase family associated with various cellular activities (AAA) BJD11_RS05245 PF17863 AAA lid domain BJD11_RS05265 PF07584 Aerotolerance regulator N-terminal BJD11_RS05265 PF00092 von Willebrand factor type A domain BJD11_RS05275 PF00375 Sodium:dicarboxylate symporter family BJD11_RS05280 PF02779 Transketolase, pyrimidine binding domain BJD11_RS05280 PF02780 Transketolase, C-terminal domain BJD11_RS05280 PF00456 Transketolase, thiamine diphosphate binding domain BJD11_RS05285 PF00593 TonB dependent receptor BJD11_RS05285 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS05290 PF01551 Peptidase family M23 BJD11_RS05290 PF04225 Opacity-associated protein A LysM-like domain BJD11_RS05295 PF03734 L,D-transpeptidase catalytic domain BJD11_RS05295 PF01476 LysM domain BJD11_RS05330 PF00005 ABC transporter BJD11_RS05330 PF03459 TOBE domain BJD11_RS05335 PF00528 Binding-protein-dependent transport system inner membrane component BJD11_RS05345 PF04273 Putative phosphatase (DUF442) BJD11_RS05345 PF00753 Metallo-beta-lactamase superfamily BJD11_RS05355 PF03922 OmpW family BJD11_RS05360 PF03922 OmpW family BJD11_RS05370 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BJD11_RS05370 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BJD11_RS05395 PF00162 Phosphoglycerate kinase BJD11_RS05400 PF13419 Haloacid dehalogenase-like hydrolase BJD11_RS05405 PF02887 Pyruvate kinase, alpha/beta domain BJD11_RS05405 PF00224 Pyruvate kinase, barrel domain BJD11_RS05410 PF00274 Fructose-bisphosphate aldolase class-I BJD11_RS05415 PF01661 Macro domain BJD11_RS05425 PF00291 Pyridoxal-phosphate dependent enzyme BJD11_RS05430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BJD11_RS05430 PF10414 Sirohaem synthase dimerisation region BJD11_RS05430 PF14824 Sirohaem biosynthesis protein central BJD11_RS05435 PF03466 LysR substrate binding domain BJD11_RS05435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS05455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS05455 PF00072 Response regulator receiver domain BJD11_RS05455 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS05455 PF01627 Hpt domain BJD11_RS05475 PF01507 Phosphoadenosine phosphosulfate reductase family BJD11_RS05480 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BJD11_RS05480 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BJD11_RS05485 PF00175 Oxidoreductase NAD-binding domain BJD11_RS05485 PF00667 FAD binding domain BJD11_RS05485 PF00258 Flavodoxin BJD11_RS05490 PF01507 Phosphoadenosine phosphosulfate reductase family BJD11_RS05495 PF00009 Elongation factor Tu GTP binding domain BJD11_RS05505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD11_RS05505 PF00529 HlyD membrane-fusion protein of T1SS BJD11_RS05510 PF00873 AcrB/AcrD/AcrF family BJD11_RS05540 PF11838 ERAP1-like C-terminal domain BJD11_RS05540 PF01433 Peptidase family M1 domain BJD11_RS05555 PF00588 SpoU rRNA Methylase family BJD11_RS05555 PF08032 RNA 2'-O ribose methyltransferase substrate binding BJD11_RS05560 PF00135 Carboxylesterase family BJD11_RS05570 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation BJD11_RS05570 PF14508 Glycosyl-hydrolase 97 N-terminal BJD11_RS05570 PF10566 Glycoside hydrolase 97 BJD11_RS05575 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain BJD11_RS05575 PF02837 Glycosyl hydrolases family 2, sugar binding domain BJD11_RS05575 PF00703 Glycosyl hydrolases family 2 BJD11_RS05585 PF00356 Bacterial regulatory proteins, lacI family BJD11_RS05595 PF01741 Large-conductance mechanosensitive channel, MscL BJD11_RS05600 PF01557 Fumarylacetoacetate (FAA) hydrolase family BJD11_RS05620 PF03600 Citrate transporter BJD11_RS05620 PF02080 TrkA-C domain BJD11_RS05625 PF02390 Putative methyltransferase BJD11_RS05630 PF05690 Thiazole biosynthesis protein ThiG BJD11_RS05660 PF13333 Integrase core domain BJD11_RS05660 PF00665 Integrase core domain BJD11_RS05660 PF13276 HTH-like domain BJD11_RS05690 PF13276 HTH-like domain BJD11_RS05690 PF13683 Integrase core domain BJD11_RS05695 PF01527 Transposase BJD11_RS05700 PF05114 Protein of unknown function (DUF692) BJD11_RS05715 PF00665 Integrase core domain BJD11_RS05715 PF13276 HTH-like domain BJD11_RS05715 PF13333 Integrase core domain BJD11_RS05755 PF04610 TrbL/VirB6 plasmid conjugal transfer protein BJD11_RS05805 PF13683 Integrase core domain BJD11_RS05805 PF13276 HTH-like domain BJD11_RS05810 PF13683 Integrase core domain BJD11_RS05810 PF13276 HTH-like domain BJD11_RS05815 PF01527 Transposase BJD11_RS05820 PF01527 Transposase BJD11_RS05835 PF13276 HTH-like domain BJD11_RS05835 PF13333 Integrase core domain BJD11_RS05835 PF00665 Integrase core domain BJD11_RS05870 PF13683 Integrase core domain BJD11_RS05870 PF13276 HTH-like domain BJD11_RS05920 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BJD11_RS05920 PF00128 Alpha amylase, catalytic domain BJD11_RS05925 PF08443 RimK-like ATP-grasp domain BJD11_RS05925 PF18030 RimK PreATP-grasp domain BJD11_RS05935 PF00072 Response regulator receiver domain BJD11_RS05935 PF00486 Transcriptional regulatory protein, C terminal BJD11_RS05940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS05940 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS05940 PF00989 PAS fold BJD11_RS05940 PF11808 Phosphate regulon sensor protein PhoR BJD11_RS05950 PF13683 Integrase core domain BJD11_RS05950 PF13276 HTH-like domain BJD11_RS05955 PF01527 Transposase BJD11_RS05980 PF01121 Dephospho-CoA kinase BJD11_RS05985 PF01478 Type IV leader peptidase family BJD11_RS05985 PF06750 Bacterial Peptidase A24 N-terminal domain BJD11_RS05990 PF00482 Type II secretion system (T2SS), protein F BJD11_RS05995 PF00114 Pilin (bacterial filament) BJD11_RS05995 PF07963 Prokaryotic N-terminal methylation motif BJD11_RS06000 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BJD11_RS06000 PF00437 Type II/IV secretion system protein BJD11_RS06005 PF00072 Response regulator receiver domain BJD11_RS06005 PF00158 Sigma-54 interaction domain BJD11_RS06005 PF02954 Bacterial regulatory protein, Fis family BJD11_RS06010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS06010 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS06015 PF00549 CoA-ligase BJD11_RS06015 PF08442 ATP-grasp domain BJD11_RS06020 PF00549 CoA-ligase BJD11_RS06020 PF02629 CoA binding domain BJD11_RS06035 PF00795 Carbon-nitrogen hydrolase BJD11_RS06035 PF02540 NAD synthase BJD11_RS06045 PF13525 Outer membrane lipoprotein BJD11_RS06050 PF00849 RNA pseudouridylate synthase BJD11_RS06055 PF02578 Multi-copper polyphenol oxidoreductase laccase BJD11_RS06065 PF04134 Protein of unknown function, DUF393 BJD11_RS06070 PF02203 Tar ligand binding domain homologue BJD11_RS06070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS06070 PF00672 HAMP domain BJD11_RS06075 PF01011 PQQ enzyme repeat BJD11_RS06080 PF00982 Glycosyltransferase family 20 BJD11_RS06085 PF00723 Glycosyl hydrolases family 15 BJD11_RS06090 PF02358 Trehalose-phosphatase BJD11_RS06095 PF00593 TonB dependent receptor BJD11_RS06095 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS06130 PF01541 GIY-YIG catalytic domain BJD11_RS06135 PF00005 ABC transporter BJD11_RS06140 PF00005 ABC transporter BJD11_RS06145 PF00004 ATPase family associated with various cellular activities (AAA) BJD11_RS06145 PF10431 C-terminal, D2-small domain, of ClpB protein BJD11_RS06145 PF17871 AAA lid domain BJD11_RS06145 PF07724 AAA domain (Cdc48 subfamily) BJD11_RS06145 PF02861 Clp amino terminal domain, pathogenicity island component BJD11_RS06150 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS06150 PF00593 TonB dependent receptor BJD11_RS06165 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BJD11_RS06165 PF12557 Cob(I)alamin adenosyltransferase N terminal BJD11_RS06170 PF03186 CobD/Cbib protein BJD11_RS06170 PF17113 Regulatory signalling modulator protein AmpE BJD11_RS06175 PF00155 Aminotransferase class I and II BJD11_RS06185 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BJD11_RS06190 PF02277 Phosphoribosyltransferase BJD11_RS06200 PF02654 Cobalamin-5-phosphate synthase BJD11_RS06210 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BJD11_RS06210 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BJD11_RS06215 PF04183 IucA / IucC family BJD11_RS06215 PF06276 Ferric iron reductase FhuF-like transporter BJD11_RS06220 PF07690 Major Facilitator Superfamily BJD11_RS06225 PF06276 Ferric iron reductase FhuF-like transporter BJD11_RS06225 PF04183 IucA / IucC family BJD11_RS06235 PF07660 Secretin and TonB N terminus short domain BJD11_RS06235 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS06235 PF00593 TonB dependent receptor BJD11_RS06245 PF00999 Sodium/hydrogen exchanger family BJD11_RS06245 PF02254 TrkA-N domain BJD11_RS06255 PF00067 Cytochrome P450 BJD11_RS06260 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS06260 PF00593 TonB dependent receptor BJD11_RS06265 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS06265 PF00593 TonB dependent receptor BJD11_RS06275 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS06275 PF00593 TonB dependent receptor BJD11_RS06280 PF12848 ABC transporter BJD11_RS06280 PF00005 ABC transporter BJD11_RS06290 PF03466 LysR substrate binding domain BJD11_RS06290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS06305 PF05506 Domain of unknown function (DUF756) BJD11_RS06305 PF04185 Phosphoesterase family BJD11_RS06320 PF07690 Major Facilitator Superfamily BJD11_RS06335 PF00152 tRNA synthetases class II (D, K and N) BJD11_RS06335 PF01336 OB-fold nucleic acid binding domain BJD11_RS06335 PF02938 GAD domain BJD11_RS06350 PF01709 Transcriptional regulator BJD11_RS06355 PF02075 Crossover junction endodeoxyribonuclease RuvC BJD11_RS06360 PF07499 RuvA, C-terminal domain BJD11_RS06360 PF01330 RuvA N terminal domain BJD11_RS06365 PF02705 K+ potassium transporter BJD11_RS06375 PF17864 RuvB AAA lid domain BJD11_RS06375 PF05491 RuvB C-terminal winged helix domain BJD11_RS06375 PF05496 Holliday junction DNA helicase RuvB P-loop domain BJD11_RS06380 PF03061 Thioesterase superfamily BJD11_RS06385 PF01618 MotA/TolQ/ExbB proton channel family BJD11_RS06390 PF02472 Biopolymer transport protein ExbD/TolR BJD11_RS06400 PF04052 TolB amino-terminal domain BJD11_RS06400 PF07676 WD40-like Beta Propeller Repeat BJD11_RS06405 PF00691 OmpA family BJD11_RS06415 PF04055 Radical SAM superfamily BJD11_RS06425 PF06508 Queuosine biosynthesis protein QueC BJD11_RS06430 PF07536 HWE histidine kinase BJD11_RS06430 PF13426 PAS domain BJD11_RS06430 PF13581 Histidine kinase-like ATPase domain BJD11_RS06440 PF03466 LysR substrate binding domain BJD11_RS06440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS06445 PF01810 LysE type translocator BJD11_RS06450 PF00672 HAMP domain BJD11_RS06450 PF02203 Tar ligand binding domain homologue BJD11_RS06450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS06455 PF05598 Transposase domain (DUF772) BJD11_RS06455 PF01609 Transposase DDE domain BJD11_RS06465 PF00849 RNA pseudouridylate synthase BJD11_RS06465 PF01479 S4 domain BJD11_RS06490 PF00270 DEAD/DEAH box helicase BJD11_RS06490 PF16124 RecQ zinc-binding BJD11_RS06490 PF00271 Helicase conserved C-terminal domain BJD11_RS06490 PF09382 RQC domain BJD11_RS06490 PF00570 HRDC domain BJD11_RS06495 PF00210 Ferritin-like domain BJD11_RS06500 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BJD11_RS06500 PF00271 Helicase conserved C-terminal domain BJD11_RS06500 PF04408 Helicase associated domain (HA2) BJD11_RS06500 PF11898 Domain of unknown function (DUF3418) BJD11_RS06500 PF00270 DEAD/DEAH box helicase BJD11_RS06510 PF02685 Glucokinase BJD11_RS06530 PF04055 Radical SAM superfamily BJD11_RS06530 PF13186 Iron-sulfur cluster-binding domain BJD11_RS06535 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BJD11_RS06540 PF03070 TENA/THI-4/PQQC family BJD11_RS06545 PF12706 Beta-lactamase superfamily domain BJD11_RS06550 PF08042 PqqA family BJD11_RS06555 PF04607 Region found in RelA / SpoT proteins BJD11_RS06555 PF13291 ACT domain BJD11_RS06555 PF02824 TGS domain BJD11_RS06570 PF00535 Glycosyl transferase family 2 BJD11_RS06575 PF00905 Penicillin binding protein transpeptidase domain BJD11_RS06575 PF00912 Transglycosylase BJD11_RS06575 PF14814 Bifunctional transglycosylase second domain BJD11_RS06585 PF04851 Type III restriction enzyme, res subunit BJD11_RS06585 PF13307 Helicase C-terminal domain BJD11_RS06590 PF00814 Glycoprotease family BJD11_RS06595 PF03747 ADP-ribosylglycohydrolase BJD11_RS06605 PF03747 ADP-ribosylglycohydrolase BJD11_RS06615 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BJD11_RS06615 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BJD11_RS06620 PF00072 Response regulator receiver domain BJD11_RS06625 PF00072 Response regulator receiver domain BJD11_RS06630 PF01584 CheW-like domain BJD11_RS06635 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BJD11_RS06635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS06640 PF01584 CheW-like domain BJD11_RS06640 PF00072 Response regulator receiver domain BJD11_RS06640 PF01627 Hpt domain BJD11_RS06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS06640 PF02895 Signal transducing histidine kinase, homodimeric domain BJD11_RS06655 PF13302 Acetyltransferase (GNAT) domain BJD11_RS06670 PF08281 Sigma-70, region 4 BJD11_RS06670 PF04542 Sigma-70 region 2 BJD11_RS06675 PF00092 von Willebrand factor type A domain BJD11_RS06675 PF12034 Domain of unknown function (DUF3520) BJD11_RS06675 PF12450 von Willebrand factor BJD11_RS06680 PF01112 Asparaginase BJD11_RS06685 PF03932 CutC family BJD11_RS06725 PF01301 Glycosyl hydrolases family 35 BJD11_RS06730 PF17678 Glycosyl hydrolase family 92 N-terminal domain BJD11_RS06730 PF07971 Glycosyl hydrolase family 92 BJD11_RS06740 PF07691 PA14 domain BJD11_RS06740 PF14310 Fibronectin type III-like domain BJD11_RS06740 PF00933 Glycosyl hydrolase family 3 N terminal domain BJD11_RS06740 PF01915 Glycosyl hydrolase family 3 C-terminal domain BJD11_RS06755 PF00704 Glycosyl hydrolases family 18 BJD11_RS06755 PF01476 LysM domain BJD11_RS06770 PF02685 Glucokinase BJD11_RS06775 PF04452 RNA methyltransferase BJD11_RS06780 PF00202 Aminotransferase class-III BJD11_RS06785 PF00293 NUDIX domain BJD11_RS06790 PF00459 Inositol monophosphatase family BJD11_RS06795 PF03819 MazG nucleotide pyrophosphohydrolase domain BJD11_RS06800 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BJD11_RS06805 PF01145 SPFH domain / Band 7 family BJD11_RS06805 PF16200 C-terminal region of band_7 BJD11_RS06815 PF01571 Aminomethyltransferase folate-binding domain BJD11_RS06815 PF08669 Glycine cleavage T-protein C-terminal barrel domain BJD11_RS06820 PF01597 Glycine cleavage H-protein BJD11_RS06845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJD11_RS06845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJD11_RS06845 PF09317 Domain of unknown function (DUF1974) BJD11_RS06850 PF00561 alpha/beta hydrolase fold BJD11_RS06855 PF00440 Bacterial regulatory proteins, tetR family BJD11_RS06860 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS06860 PF00593 TonB dependent receptor BJD11_RS06870 PF01430 Hsp33 protein BJD11_RS06875 PF00912 Transglycosylase BJD11_RS06880 PF00535 Glycosyl transferase family 2 BJD11_RS06885 PF00478 IMP dehydrogenase / GMP reductase domain BJD11_RS06885 PF00571 CBS domain BJD11_RS06890 PF05170 AsmA family BJD11_RS06895 PF03006 Haemolysin-III related BJD11_RS06900 PF00009 Elongation factor Tu GTP binding domain BJD11_RS06900 PF16658 Class II release factor RF3, C-terminal domain BJD11_RS06905 PF01551 Peptidase family M23 BJD11_RS06905 PF08525 Opacity-associated protein A N-terminal motif BJD11_RS06905 PF01476 LysM domain BJD11_RS06910 PF00561 alpha/beta hydrolase fold BJD11_RS06915 PF01053 Cys/Met metabolism PLP-dependent enzyme BJD11_RS06920 PF00742 Homoserine dehydrogenase BJD11_RS06920 PF00696 Amino acid kinase family BJD11_RS06920 PF03447 Homoserine dehydrogenase, NAD binding domain BJD11_RS06925 PF00561 alpha/beta hydrolase fold BJD11_RS06930 PF03315 Serine dehydratase beta chain BJD11_RS06930 PF03313 Serine dehydratase alpha chain BJD11_RS06950 PF04264 YceI-like domain BJD11_RS06955 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS06955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS06955 PF01627 Hpt domain BJD11_RS06955 PF00072 Response regulator receiver domain BJD11_RS06960 PF01627 Hpt domain BJD11_RS06960 PF17149 Periplasmic sensor domain found in signal transduction proteins BJD11_RS06960 PF00672 HAMP domain BJD11_RS06960 PF00072 Response regulator receiver domain BJD11_RS06960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS06960 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS06965 PF00672 HAMP domain BJD11_RS06965 PF17149 Periplasmic sensor domain found in signal transduction proteins BJD11_RS06965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS06965 PF00072 Response regulator receiver domain BJD11_RS06965 PF01627 Hpt domain BJD11_RS06965 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS06970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS06970 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS06970 PF17149 Periplasmic sensor domain found in signal transduction proteins BJD11_RS06970 PF00072 Response regulator receiver domain BJD11_RS06970 PF01627 Hpt domain BJD11_RS06970 PF00672 HAMP domain BJD11_RS06975 PF07690 Major Facilitator Superfamily BJD11_RS06980 PF01208 Uroporphyrinogen decarboxylase (URO-D) BJD11_RS06990 PF01761 3-dehydroquinate synthase BJD11_RS06995 PF01202 Shikimate kinase BJD11_RS07000 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BJD11_RS07000 PF01243 Pyridoxamine 5'-phosphate oxidase BJD11_RS07010 PF04012 PspA/IM30 family BJD11_RS07035 PF03738 Glutathionylspermidine synthase preATP-grasp BJD11_RS07040 PF07690 Major Facilitator Superfamily BJD11_RS07045 PF00376 MerR family regulatory protein BJD11_RS07045 PF09278 MerR, DNA binding BJD11_RS07085 PF04820 Tryptophan halogenase BJD11_RS07095 PF12706 Beta-lactamase superfamily domain BJD11_RS07130 PF00324 Amino acid permease BJD11_RS07135 PF00196 Bacterial regulatory proteins, luxR family BJD11_RS07145 PF00561 alpha/beta hydrolase fold BJD11_RS07160 PF00324 Amino acid permease BJD11_RS07170 PF01654 Cytochrome bd terminal oxidase subunit I BJD11_RS07175 PF02322 Cytochrome bd terminal oxidase subunit II BJD11_RS07180 PF00756 Putative esterase BJD11_RS07185 PF03448 MgtE intracellular N domain BJD11_RS07185 PF01769 Divalent cation transporter BJD11_RS07185 PF00571 CBS domain BJD11_RS07195 PF05524 PEP-utilising enzyme, N-terminal BJD11_RS07195 PF00391 PEP-utilising enzyme, mobile domain BJD11_RS07195 PF02896 PEP-utilising enzyme, TIM barrel domain BJD11_RS07200 PF00381 PTS HPr component phosphorylation site BJD11_RS07210 PF03668 P-loop ATPase protein family BJD11_RS07215 PF07475 HPr Serine kinase C-terminal domain BJD11_RS07215 PF02603 HPr Serine kinase N terminus BJD11_RS07220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BJD11_RS07225 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BJD11_RS07230 PF04963 Sigma-54 factor, core binding domain BJD11_RS07230 PF04552 Sigma-54, DNA binding domain BJD11_RS07230 PF00309 Sigma-54 factor, Activator interacting domain (AID) BJD11_RS07235 PF00005 ABC transporter BJD11_RS07240 PF03968 OstA-like protein BJD11_RS07255 PF01380 SIS domain BJD11_RS07255 PF00571 CBS domain BJD11_RS07260 PF01722 BolA-like protein BJD11_RS07265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BJD11_RS07290 PF00551 Formyl transferase BJD11_RS07300 PF02769 AIR synthase related protein, C-terminal domain BJD11_RS07300 PF00586 AIR synthase related protein, N-terminal domain BJD11_RS07310 PF01594 AI-2E family transporter BJD11_RS07315 PF00308 Bacterial dnaA protein BJD11_RS07320 PF00483 Nucleotidyl transferase BJD11_RS07325 PF01636 Phosphotransferase enzyme family BJD11_RS07355 PF00175 Oxidoreductase NAD-binding domain BJD11_RS07355 PF00258 Flavodoxin BJD11_RS07355 PF00667 FAD binding domain BJD11_RS07360 PF02424 ApbE family BJD11_RS07385 PF18331 PKHD-type hydroxylase C-terminal domain BJD11_RS07385 PF13640 2OG-Fe(II) oxygenase superfamily BJD11_RS07390 PF00593 TonB dependent receptor BJD11_RS07390 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS07400 PF00355 Rieske [2Fe-2S] domain BJD11_RS07410 PF00266 Aminotransferase class-V BJD11_RS07415 PF01458 Uncharacterized protein family (UPF0051) BJD11_RS07420 PF00005 ABC transporter BJD11_RS07425 PF01458 Uncharacterized protein family (UPF0051) BJD11_RS07430 PF02082 Transcriptional regulator BJD11_RS07440 PF01965 DJ-1/PfpI family BJD11_RS07460 PF01551 Peptidase family M23 BJD11_RS07470 PF14748 Pyrroline-5-carboxylate reductase dimerisation BJD11_RS07470 PF03807 NADP oxidoreductase coenzyme F420-dependent BJD11_RS07475 PF01168 Alanine racemase, N-terminal domain BJD11_RS07480 PF00437 Type II/IV secretion system protein BJD11_RS07485 PF00437 Type II/IV secretion system protein BJD11_RS07500 PF03352 Methyladenine glycosylase BJD11_RS07500 PF00958 GMP synthase C terminal domain BJD11_RS07500 PF13673 Acetyltransferase (GNAT) domain BJD11_RS07500 PF00117 Glutamine amidotransferase class-I BJD11_RS07500 PF13302 Acetyltransferase (GNAT) domain BJD11_RS07510 PF02622 Uncharacterized ACR, COG1678 BJD11_RS07515 PF03652 Holliday junction resolvase BJD11_RS07520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BJD11_RS07520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BJD11_RS07525 PF02566 OsmC-like protein BJD11_RS07535 PF02567 Phenazine biosynthesis-like protein BJD11_RS07540 PF02567 Phenazine biosynthesis-like protein BJD11_RS07545 PF00696 Amino acid kinase family BJD11_RS07545 PF01842 ACT domain BJD11_RS07560 PF08245 Mur ligase middle domain BJD11_RS07560 PF02875 Mur ligase family, glutamate ligase domain BJD11_RS07575 PF00348 Polyprenyl synthetase BJD11_RS07580 PF00436 Single-strand binding protein family BJD11_RS07585 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS07585 PF01590 GAF domain BJD11_RS07585 PF00563 EAL domain BJD11_RS07585 PF00360 Phytochrome region BJD11_RS07590 PF14765 Polyketide synthase dehydratase BJD11_RS07590 PF16197 Ketoacyl-synthetase C-terminal extension BJD11_RS07590 PF00107 Zinc-binding dehydrogenase BJD11_RS07590 PF08659 KR domain BJD11_RS07590 PF08240 Alcohol dehydrogenase GroES-like domain BJD11_RS07590 PF00698 Acyl transferase domain BJD11_RS07590 PF00109 Beta-ketoacyl synthase, N-terminal domain BJD11_RS07590 PF02801 Beta-ketoacyl synthase, C-terminal domain BJD11_RS07590 PF00550 Phosphopantetheine attachment site BJD11_RS07595 PF00111 2Fe-2S iron-sulfur cluster binding domain BJD11_RS07595 PF01799 [2Fe-2S] binding domain BJD11_RS07595 PF10518 TAT (twin-arginine translocation) pathway signal sequence BJD11_RS07600 PF03450 CO dehydrogenase flavoprotein C-terminal domain BJD11_RS07600 PF00941 FAD binding domain in molybdopterin dehydrogenase BJD11_RS07605 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BJD11_RS07605 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BJD11_RS07610 PF13478 XdhC Rossmann domain BJD11_RS07610 PF02625 XdhC and CoxI family BJD11_RS07650 PF04328 Selenoprotein, putative BJD11_RS07655 PF13722 5TM C-terminal transporter carbon starvation CstA BJD11_RS07655 PF02554 Carbon starvation protein CstA BJD11_RS07660 PF05726 Pirin C-terminal cupin domain BJD11_RS07660 PF02678 Pirin BJD11_RS07675 PF05726 Pirin C-terminal cupin domain BJD11_RS07675 PF02678 Pirin BJD11_RS07685 PF04493 Endonuclease V BJD11_RS07690 PF00300 Histidine phosphatase superfamily (branch 1) BJD11_RS07705 PF05649 Peptidase family M13 BJD11_RS07705 PF01431 Peptidase family M13 BJD11_RS07710 PF13091 PLD-like domain BJD11_RS07715 PF00072 Response regulator receiver domain BJD11_RS07715 PF01339 CheB methylesterase BJD11_RS07720 PF03705 CheR methyltransferase, all-alpha domain BJD11_RS07720 PF01739 CheR methyltransferase, SAM binding domain BJD11_RS07725 PF00563 EAL domain BJD11_RS07725 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS07725 PF13426 PAS domain BJD11_RS07730 PF01584 CheW-like domain BJD11_RS07735 PF00672 HAMP domain BJD11_RS07735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS07735 PF02203 Tar ligand binding domain homologue BJD11_RS07745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS07745 PF09078 CheY binding BJD11_RS07745 PF02895 Signal transducing histidine kinase, homodimeric domain BJD11_RS07745 PF01584 CheW-like domain BJD11_RS07745 PF01627 Hpt domain BJD11_RS07755 PF00270 DEAD/DEAH box helicase BJD11_RS07755 PF17757 UvrB interaction domain BJD11_RS07755 PF00271 Helicase conserved C-terminal domain BJD11_RS07755 PF03461 TRCF domain BJD11_RS07755 PF02559 CarD-like/TRCF domain BJD11_RS07765 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BJD11_RS07770 PF00072 Response regulator receiver domain BJD11_RS07770 PF00486 Transcriptional regulatory protein, C terminal BJD11_RS07775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS07775 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS07775 PF00672 HAMP domain BJD11_RS07785 PF06123 Inner membrane protein CreD BJD11_RS07810 PF00749 tRNA synthetases class I (E and Q), catalytic domain BJD11_RS07815 PF01475 Ferric uptake regulator family BJD11_RS07825 PF00529 HlyD membrane-fusion protein of T1SS BJD11_RS07825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD11_RS07830 PF00873 AcrB/AcrD/AcrF family BJD11_RS07835 PF02321 Outer membrane efflux protein BJD11_RS07840 PF00440 Bacterial regulatory proteins, tetR family BJD11_RS07840 PF16859 Tetracyclin repressor-like, C-terminal domain BJD11_RS07845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS07845 PF03466 LysR substrate binding domain BJD11_RS07855 PF06719 AraC-type transcriptional regulator N-terminus BJD11_RS07855 PF12833 Helix-turn-helix domain BJD11_RS07865 PF03466 LysR substrate binding domain BJD11_RS07865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS07870 PF07690 Major Facilitator Superfamily BJD11_RS07875 PF00248 Aldo/keto reductase family BJD11_RS07885 PF00082 Subtilase family BJD11_RS07885 PF01483 Proprotein convertase P-domain BJD11_RS07895 PF00593 TonB dependent receptor BJD11_RS07895 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS07915 PF00654 Voltage gated chloride channel BJD11_RS07925 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BJD11_RS07925 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BJD11_RS07930 PF06029 AlkA N-terminal domain BJD11_RS07930 PF00730 HhH-GPD superfamily base excision DNA repair protein BJD11_RS07975 PF04542 Sigma-70 region 2 BJD11_RS07975 PF04539 Sigma-70 region 3 BJD11_RS07975 PF04545 Sigma-70, region 4 BJD11_RS07980 PF03880 DbpA RNA binding domain BJD11_RS07980 PF00270 DEAD/DEAH box helicase BJD11_RS07980 PF00271 Helicase conserved C-terminal domain BJD11_RS07985 PF00563 EAL domain BJD11_RS07985 PF08448 PAS fold BJD11_RS07985 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS07990 PF00849 RNA pseudouridylate synthase BJD11_RS07990 PF01479 S4 domain BJD11_RS07995 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS08015 PF03737 Aldolase/RraA BJD11_RS08020 PF00144 Beta-lactamase BJD11_RS08025 PF00999 Sodium/hydrogen exchanger family BJD11_RS08035 PF00072 Response regulator receiver domain BJD11_RS08035 PF00486 Transcriptional regulatory protein, C terminal BJD11_RS08040 PF02321 Outer membrane efflux protein BJD11_RS08055 PF00873 AcrB/AcrD/AcrF family BJD11_RS08065 PF00005 ABC transporter BJD11_RS08065 PF00664 ABC transporter transmembrane region BJD11_RS08095 PF01022 Bacterial regulatory protein, arsR family BJD11_RS08100 PF03466 LysR substrate binding domain BJD11_RS08100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS08110 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BJD11_RS08115 PF04070 Domain of unknown function (DUF378) BJD11_RS08145 PF00085 Thioredoxin BJD11_RS08155 PF08264 Anticodon-binding domain of tRNA BJD11_RS08155 PF00133 tRNA synthetases class I (I, L, M and V) BJD11_RS08155 PF13603 Leucyl-tRNA synthetase, Domain 2 BJD11_RS08175 PF01467 Cytidylyltransferase-like BJD11_RS08190 PF02590 Predicted SPOUT methyltransferase BJD11_RS08200 PF04402 Protein of unknown function (DUF541) BJD11_RS08205 PF02545 Maf-like protein BJD11_RS08210 PF10150 Ribonuclease E/G family BJD11_RS08210 PF00575 S1 RNA binding domain BJD11_RS08215 PF13116 Protein of unknown function BJD11_RS08215 PF13502 AsmA-like C-terminal region BJD11_RS08225 PF01523 Putative modulator of DNA gyrase BJD11_RS08230 PF04751 Protein of unknown function (DUF615) BJD11_RS08235 PF01523 Putative modulator of DNA gyrase BJD11_RS08245 PF14521 Lysine-specific metallo-endopeptidase BJD11_RS08250 PF00348 Polyprenyl synthetase BJD11_RS08255 PF02609 Exonuclease VII small subunit BJD11_RS08260 PF09179 TilS substrate binding domain BJD11_RS08260 PF01171 PP-loop family BJD11_RS08260 PF11734 TilS substrate C-terminal domain BJD11_RS08270 PF00245 Alkaline phosphatase BJD11_RS08275 PF00375 Sodium:dicarboxylate symporter family BJD11_RS08280 PF13649 Methyltransferase domain BJD11_RS08290 PF00877 NlpC/P60 family BJD11_RS08295 PF00877 NlpC/P60 family BJD11_RS08300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BJD11_RS08305 PF04235 Protein of unknown function (DUF418) BJD11_RS08310 PF01266 FAD dependent oxidoreductase BJD11_RS08315 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD11_RS08315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BJD11_RS08335 PF01431 Peptidase family M13 BJD11_RS08335 PF05649 Peptidase family M13 BJD11_RS08345 PF01431 Peptidase family M13 BJD11_RS08345 PF05649 Peptidase family M13 BJD11_RS08360 PF00593 TonB dependent receptor BJD11_RS08360 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS08365 PF10609 NUBPL iron-transfer P-loop NTPase BJD11_RS08375 PF00692 dUTPase BJD11_RS08395 PF01738 Dienelactone hydrolase family BJD11_RS08400 PF04055 Radical SAM superfamily BJD11_RS08400 PF18693 TRAM domain BJD11_RS08400 PF00919 Uncharacterized protein family UPF0004 BJD11_RS08405 PF03449 Transcription elongation factor, N-terminal BJD11_RS08405 PF01272 Transcription elongation factor, GreA/GreB, C-term BJD11_RS08425 PF00293 NUDIX domain BJD11_RS08430 PF05872 Bacterial protein of unknown function (DUF853) BJD11_RS08440 PF02666 Phosphatidylserine decarboxylase BJD11_RS08445 PF02630 SCO1/SenC BJD11_RS08450 PF05175 Methyltransferase small domain BJD11_RS08455 PF01264 Chorismate synthase BJD11_RS08460 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BJD11_RS08460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BJD11_RS08465 PF02774 Semialdehyde dehydrogenase, dimerisation domain BJD11_RS08465 PF01118 Semialdehyde dehydrogenase, NAD binding domain BJD11_RS08480 PF01416 tRNA pseudouridine synthase BJD11_RS08485 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BJD11_RS08490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS08490 PF03466 LysR substrate binding domain BJD11_RS08495 PF00291 Pyridoxal-phosphate dependent enzyme BJD11_RS08510 PF13276 HTH-like domain BJD11_RS08510 PF00665 Integrase core domain BJD11_RS08510 PF13333 Integrase core domain BJD11_RS08515 PF00290 Tryptophan synthase alpha chain BJD11_RS08520 PF01039 Carboxyl transferase domain BJD11_RS08520 PF17848 Acetyl-coA carboxylase zinc finger domain BJD11_RS08525 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BJD11_RS08525 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BJD11_RS08525 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BJD11_RS08525 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BJD11_RS08540 PF00563 EAL domain BJD11_RS08540 PF03707 Bacterial signalling protein N terminal repeat BJD11_RS08540 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS08560 PF00106 short chain dehydrogenase BJD11_RS08565 PF00121 Triosephosphate isomerase BJD11_RS08580 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BJD11_RS08585 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BJD11_RS08590 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BJD11_RS08595 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BJD11_RS08605 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BJD11_RS08605 PF10531 SLBB domain BJD11_RS08605 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BJD11_RS08610 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal BJD11_RS08610 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BJD11_RS08610 PF00384 Molybdopterin oxidoreductase BJD11_RS08615 PF00146 NADH dehydrogenase BJD11_RS08620 PF12838 4Fe-4S dicluster domain BJD11_RS08625 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BJD11_RS08630 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BJD11_RS08635 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BJD11_RS08635 PF00361 Proton-conducting membrane transporter BJD11_RS08640 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus BJD11_RS08640 PF00361 Proton-conducting membrane transporter BJD11_RS08645 PF00361 Proton-conducting membrane transporter BJD11_RS08655 PF02576 RimP N-terminal domain BJD11_RS08655 PF17384 RimP C-terminal SH3 domain BJD11_RS08660 PF00575 S1 RNA binding domain BJD11_RS08660 PF13184 NusA-like KH domain BJD11_RS08660 PF08529 NusA N-terminal domain BJD11_RS08665 PF08364 Bacterial translation initiation factor IF-2 associated region BJD11_RS08665 PF11987 Translation-initiation factor 2 BJD11_RS08665 PF00009 Elongation factor Tu GTP binding domain BJD11_RS08665 PF04760 Translation initiation factor IF-2, N-terminal region BJD11_RS08670 PF02033 Ribosome-binding factor A BJD11_RS08675 PF01509 TruB family pseudouridylate synthase (N terminal domain) BJD11_RS08675 PF16198 tRNA pseudouridylate synthase B C-terminal domain BJD11_RS08675 PF09157 Pseudouridine synthase II TruB, C-terminal BJD11_RS08680 PF00312 Ribosomal protein S15 BJD11_RS08685 PF03725 3' exoribonuclease family, domain 2 BJD11_RS08685 PF00575 S1 RNA binding domain BJD11_RS08685 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BJD11_RS08685 PF01138 3' exoribonuclease family, domain 1 BJD11_RS08685 PF00013 KH domain BJD11_RS08695 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BJD11_RS08695 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BJD11_RS08705 PF00731 AIR carboxylase BJD11_RS08710 PF02222 ATP-grasp domain BJD11_RS08710 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BJD11_RS08715 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BJD11_RS08715 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BJD11_RS08720 PF00462 Glutaredoxin BJD11_RS08730 PF01914 MarC family integral membrane protein BJD11_RS08735 PF00593 TonB dependent receptor BJD11_RS08740 PF11892 Domain of unknown function (DUF3412) BJD11_RS08740 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BJD11_RS08740 PF03641 Possible lysine decarboxylase BJD11_RS08745 PF07963 Prokaryotic N-terminal methylation motif BJD11_RS08745 PF00114 Pilin (bacterial filament) BJD11_RS08765 PF05567 Neisseria PilC beta-propeller domain BJD11_RS08785 PF04851 Type III restriction enzyme, res subunit BJD11_RS08785 PF00271 Helicase conserved C-terminal domain BJD11_RS08785 PF02151 UvrB/uvrC motif BJD11_RS08785 PF12344 Ultra-violet resistance protein B BJD11_RS08785 PF17757 UvrB interaction domain BJD11_RS08805 PF02534 Type IV secretory system Conjugative DNA transfer BJD11_RS08825 PF03743 Bacterial conjugation TrbI-like protein BJD11_RS08830 PF00437 Type II/IV secretion system protein BJD11_RS08835 PF01464 Transglycosylase SLT domain BJD11_RS08845 PF05101 Type IV secretory pathway, VirB3-like protein BJD11_RS08850 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BJD11_RS08860 PF00128 Alpha amylase, catalytic domain BJD11_RS08875 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation BJD11_RS08875 PF14508 Glycosyl-hydrolase 97 N-terminal BJD11_RS08875 PF10566 Glycoside hydrolase 97 BJD11_RS08885 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BJD11_RS08890 PF00128 Alpha amylase, catalytic domain BJD11_RS08890 PF00686 Starch binding domain BJD11_RS08895 PF00356 Bacterial regulatory proteins, lacI family BJD11_RS08900 PF03129 Anticodon binding domain BJD11_RS08900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BJD11_RS08900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BJD11_RS08900 PF02824 TGS domain BJD11_RS08905 PF05198 Translation initiation factor IF-3, N-terminal domain BJD11_RS08905 PF00707 Translation initiation factor IF-3, C-terminal domain BJD11_RS08910 PF01632 Ribosomal protein L35 BJD11_RS08915 PF00453 Ribosomal protein L20 BJD11_RS08920 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BJD11_RS08920 PF01409 tRNA synthetases class II core domain (F) BJD11_RS08925 PF03483 B3/4 domain BJD11_RS08925 PF03484 tRNA synthetase B5 domain BJD11_RS08925 PF03147 Ferredoxin-fold anticodon binding domain BJD11_RS08925 PF01588 Putative tRNA binding domain BJD11_RS08925 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BJD11_RS08930 PF00216 Bacterial DNA-binding protein BJD11_RS08935 PF13411 MerR HTH family regulatory protein BJD11_RS08955 PF02397 Bacterial sugar transferase BJD11_RS08975 PF00534 Glycosyl transferases group 1 BJD11_RS08975 PF13439 Glycosyltransferase Family 4 BJD11_RS08985 PF14667 Polysaccharide biosynthesis C-terminal domain BJD11_RS09000 PF03808 Glycosyl transferase WecB/TagA/CpsF family BJD11_RS09015 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BJD11_RS09015 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BJD11_RS09020 PF00753 Metallo-beta-lactamase superfamily BJD11_RS09020 PF16123 Hydroxyacylglutathione hydrolase C-terminus BJD11_RS09025 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BJD11_RS09045 PF02779 Transketolase, pyrimidine binding domain BJD11_RS09045 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BJD11_RS09045 PF02780 Transketolase, C-terminal domain BJD11_RS09055 PF02770 Acyl-CoA dehydrogenase, middle domain BJD11_RS09055 PF12806 Acetyl-CoA dehydrogenase C-terminal like BJD11_RS09055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJD11_RS09055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJD11_RS09065 PF08212 Lipocalin-like domain BJD11_RS09095 PF13426 PAS domain BJD11_RS09095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS09095 PF00072 Response regulator receiver domain BJD11_RS09100 PF04362 Bacterial Fe(2+) trafficking BJD11_RS09105 PF14815 NUDIX domain BJD11_RS09105 PF00730 HhH-GPD superfamily base excision DNA repair protein BJD11_RS09105 PF00633 Helix-hairpin-helix motif BJD11_RS09105 PF10576 Iron-sulfur binding domain of endonuclease III BJD11_RS09110 PF00448 SRP54-type protein, GTPase domain BJD11_RS09110 PF02881 SRP54-type protein, helical bundle domain BJD11_RS09120 PF05544 Proline racemase BJD11_RS09125 PF01266 FAD dependent oxidoreductase BJD11_RS09135 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD11_RS09135 PF04324 BFD-like [2Fe-2S] binding domain BJD11_RS09140 PF00701 Dihydrodipicolinate synthetase family BJD11_RS09145 PF00171 Aldehyde dehydrogenase family BJD11_RS09150 PF01321 Creatinase/Prolidase N-terminal domain BJD11_RS09150 PF00557 Metallopeptidase family M24 BJD11_RS09165 PF13520 Amino acid permease BJD11_RS09185 PF09286 Pro-kumamolisin, activation domain BJD11_RS09185 PF00082 Subtilase family BJD11_RS09195 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS09195 PF00593 TonB dependent receptor BJD11_RS09200 PF07532 Bacterial Ig-like domain (group 4) BJD11_RS09205 PF04616 Glycosyl hydrolases family 43 BJD11_RS09215 PF00593 TonB dependent receptor BJD11_RS09215 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS09240 PF01527 Transposase BJD11_RS09245 PF13683 Integrase core domain BJD11_RS09245 PF13276 HTH-like domain BJD11_RS09275 PF00183 Hsp90 protein BJD11_RS09275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS09285 PF01467 Cytidylyltransferase-like BJD11_RS09300 PF00037 4Fe-4S binding domain BJD11_RS09310 PF02927 Cellulase N-terminal ig-like domain BJD11_RS09310 PF00759 Glycosyl hydrolase family 9 BJD11_RS09350 PF02547 Queuosine biosynthesis protein BJD11_RS09355 PF01702 Queuine tRNA-ribosyltransferase BJD11_RS09360 PF02699 Preprotein translocase subunit BJD11_RS09365 PF02355 Protein export membrane protein BJD11_RS09365 PF07549 SecD/SecF GG Motif BJD11_RS09365 PF13721 SecD export protein N-terminal TM region BJD11_RS09370 PF02355 Protein export membrane protein BJD11_RS09370 PF07549 SecD/SecF GG Motif BJD11_RS09390 PF13276 HTH-like domain BJD11_RS09390 PF13333 Integrase core domain BJD11_RS09390 PF00665 Integrase core domain BJD11_RS09430 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BJD11_RS09435 PF00294 pfkB family carbohydrate kinase BJD11_RS09440 PF02896 PEP-utilising enzyme, TIM barrel domain BJD11_RS09440 PF00391 PEP-utilising enzyme, mobile domain BJD11_RS09440 PF05524 PEP-utilising enzyme, N-terminal BJD11_RS09440 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BJD11_RS09440 PF00381 PTS HPr component phosphorylation site BJD11_RS09445 PF00356 Bacterial regulatory proteins, lacI family BJD11_RS09450 PF00873 AcrB/AcrD/AcrF family BJD11_RS09455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD11_RS09455 PF00529 HlyD membrane-fusion protein of T1SS BJD11_RS09465 PF05088 Bacterial NAD-glutamate dehydrogenase BJD11_RS09470 PF07690 Major Facilitator Superfamily BJD11_RS09475 PF00072 Response regulator receiver domain BJD11_RS09480 PF00672 HAMP domain BJD11_RS09480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS09480 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS09480 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BJD11_RS09480 PF00072 Response regulator receiver domain BJD11_RS09480 PF01627 Hpt domain BJD11_RS09485 PF04286 Protein of unknown function (DUF445) BJD11_RS09495 PF00202 Aminotransferase class-III BJD11_RS09505 PF07690 Major Facilitator Superfamily BJD11_RS09510 PF02634 FdhD/NarQ family BJD11_RS09515 PF00384 Molybdopterin oxidoreductase BJD11_RS09525 PF00083 Sugar (and other) transporter BJD11_RS09525 PF07690 Major Facilitator Superfamily BJD11_RS09530 PF01814 Hemerythrin HHE cation binding domain BJD11_RS09535 PF00072 Response regulator receiver domain BJD11_RS09535 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS09540 PF01266 FAD dependent oxidoreductase BJD11_RS09545 PF00120 Glutamine synthetase, catalytic domain BJD11_RS09550 PF07722 Peptidase C26 BJD11_RS09555 PF00120 Glutamine synthetase, catalytic domain BJD11_RS09560 PF00202 Aminotransferase class-III BJD11_RS09565 PF13416 Bacterial extracellular solute-binding protein BJD11_RS09570 PF13533 Biotin-lipoyl like BJD11_RS09575 PF07690 Major Facilitator Superfamily BJD11_RS09580 PF02321 Outer membrane efflux protein BJD11_RS09595 PF00528 Binding-protein-dependent transport system inner membrane component BJD11_RS09600 PF00528 Binding-protein-dependent transport system inner membrane component BJD11_RS09605 PF00171 Aldehyde dehydrogenase family BJD11_RS09620 PF00571 CBS domain BJD11_RS09620 PF03471 Transporter associated domain BJD11_RS09630 PF02130 Uncharacterized protein family UPF0054 BJD11_RS09640 PF02562 PhoH-like protein BJD11_RS09645 PF04055 Radical SAM superfamily BJD11_RS09645 PF01938 TRAM domain BJD11_RS09645 PF00919 Uncharacterized protein family UPF0004 BJD11_RS09660 PF01464 Transglycosylase SLT domain BJD11_RS09670 PF00355 Rieske [2Fe-2S] domain BJD11_RS09670 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BJD11_RS09675 PF00032 Cytochrome b(C-terminal)/b6/petD BJD11_RS09675 PF00033 Cytochrome b/b6/petB BJD11_RS09680 PF02167 Cytochrome C1 family BJD11_RS09685 PF02798 Glutathione S-transferase, N-terminal domain BJD11_RS09685 PF00043 Glutathione S-transferase, C-terminal domain BJD11_RS09690 PF04386 Stringent starvation protein B BJD11_RS09710 PF00271 Helicase conserved C-terminal domain BJD11_RS09710 PF08494 DEAD/H associated BJD11_RS09710 PF00270 DEAD/DEAH box helicase BJD11_RS09715 PF02245 Methylpurine-DNA glycosylase (MPG) BJD11_RS09720 PF00672 HAMP domain BJD11_RS09720 PF02743 Cache domain BJD11_RS09720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS09725 PF01584 CheW-like domain BJD11_RS09745 PF01381 Helix-turn-helix BJD11_RS09760 PF13356 Arm DNA-binding domain BJD11_RS09760 PF00589 Phage integrase family BJD11_RS09780 PF01068 ATP dependent DNA ligase domain BJD11_RS09780 PF04679 ATP dependent DNA ligase C terminal region BJD11_RS09780 PF13298 DNA polymerase Ligase (LigD) BJD11_RS09785 PF01612 3'-5' exonuclease BJD11_RS09785 PF00570 HRDC domain BJD11_RS09800 PF03781 Sulfatase-modifying factor enzyme 1 BJD11_RS09815 PF13742 OB-fold nucleic acid binding domain BJD11_RS09815 PF02601 Exonuclease VII, large subunit BJD11_RS09820 PF08331 Domain of unknown function (DUF1730) BJD11_RS09825 PF03853 YjeF-related protein N-terminus BJD11_RS09825 PF01256 Carbohydrate kinase BJD11_RS09830 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BJD11_RS09835 PF01520 N-acetylmuramoyl-L-alanine amidase BJD11_RS09835 PF11741 AMIN domain BJD11_RS09840 PF08676 MutL C terminal dimerisation domain BJD11_RS09840 PF01119 DNA mismatch repair protein, C-terminal domain BJD11_RS09860 PF05233 PHB accumulation regulatory domain BJD11_RS09860 PF07879 PHB/PHA accumulation regulator DNA-binding domain BJD11_RS09865 PF00106 short chain dehydrogenase BJD11_RS09870 PF00749 tRNA synthetases class I (E and Q), catalytic domain BJD11_RS09875 PF01435 Peptidase family M48 BJD11_RS09880 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS09880 PF00563 EAL domain BJD11_RS09880 PF00072 Response regulator receiver domain BJD11_RS09890 PF07152 YaeQ protein BJD11_RS09895 PF00313 'Cold-shock' DNA-binding domain BJD11_RS09900 PF14497 Glutathione S-transferase, C-terminal domain BJD11_RS09900 PF02798 Glutathione S-transferase, N-terminal domain BJD11_RS09905 PF00135 Carboxylesterase family BJD11_RS09910 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BJD11_RS09915 PF00156 Phosphoribosyl transferase domain BJD11_RS09920 PF00270 DEAD/DEAH box helicase BJD11_RS09920 PF00271 Helicase conserved C-terminal domain BJD11_RS09920 PF03880 DbpA RNA binding domain BJD11_RS09925 PF16326 ABC transporter C-terminal domain BJD11_RS09925 PF00005 ABC transporter BJD11_RS09925 PF12848 ABC transporter BJD11_RS09935 PF00545 ribonuclease BJD11_RS09940 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BJD11_RS09940 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BJD11_RS09945 PF00459 Inositol monophosphatase family BJD11_RS09950 PF00588 SpoU rRNA Methylase family BJD11_RS09960 PF13188 PAS domain BJD11_RS09960 PF03707 Bacterial signalling protein N terminal repeat BJD11_RS09960 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS09960 PF00563 EAL domain BJD11_RS09965 PF04055 Radical SAM superfamily BJD11_RS09970 PF01132 Elongation factor P (EF-P) OB domain BJD11_RS09970 PF09285 Elongation factor P, C-terminal BJD11_RS09970 PF08207 Elongation factor P (EF-P) KOW-like domain BJD11_RS09980 PF01979 Amidohydrolase family BJD11_RS09990 PF13419 Haloacid dehalogenase-like hydrolase BJD11_RS10005 PF00295 Glycosyl hydrolases family 28 BJD11_RS10030 PF00753 Metallo-beta-lactamase superfamily BJD11_RS10045 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BJD11_RS10065 PF08460 Bacterial SH3 domain BJD11_RS10065 PF01551 Peptidase family M23 BJD11_RS10070 PF01979 Amidohydrolase family BJD11_RS10075 PF01809 Putative membrane protein insertion efficiency factor BJD11_RS10080 PF01258 Prokaryotic dksA/traR C4-type zinc finger BJD11_RS10090 PF02657 Fe-S metabolism associated domain BJD11_RS10095 PF09190 DALR domain BJD11_RS10095 PF01406 tRNA synthetases class I (C) catalytic domain BJD11_RS10105 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BJD11_RS10105 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BJD11_RS10110 PF00764 Arginosuccinate synthase BJD11_RS10120 PF01546 Peptidase family M20/M25/M40 BJD11_RS10120 PF07687 Peptidase dimerisation domain BJD11_RS10125 PF00696 Amino acid kinase family BJD11_RS10125 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase BJD11_RS10135 PF01118 Semialdehyde dehydrogenase, NAD binding domain BJD11_RS10140 PF00206 Lyase BJD11_RS10150 PF01472 PUA domain BJD11_RS10150 PF00696 Amino acid kinase family BJD11_RS10155 PF00171 Aldehyde dehydrogenase family BJD11_RS10165 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BJD11_RS10165 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BJD11_RS10185 PF02322 Cytochrome bd terminal oxidase subunit II BJD11_RS10190 PF01654 Cytochrome bd terminal oxidase subunit I BJD11_RS10195 PF00005 ABC transporter BJD11_RS10195 PF00664 ABC transporter transmembrane region BJD11_RS10200 PF00005 ABC transporter BJD11_RS10200 PF00664 ABC transporter transmembrane region BJD11_RS10205 PF00313 'Cold-shock' DNA-binding domain BJD11_RS10210 PF00561 alpha/beta hydrolase fold BJD11_RS10220 PF03918 Cytochrome C biogenesis protein BJD11_RS10225 PF08534 Redoxin BJD11_RS10230 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BJD11_RS10230 PF01578 Cytochrome C assembly protein BJD11_RS10235 PF03100 CcmE BJD11_RS10245 PF01578 Cytochrome C assembly protein BJD11_RS10250 PF03379 CcmB protein BJD11_RS10255 PF00005 ABC transporter BJD11_RS10260 PF00155 Aminotransferase class I and II BJD11_RS10265 PF00795 Carbon-nitrogen hydrolase BJD11_RS10280 PF00849 RNA pseudouridylate synthase BJD11_RS10280 PF01479 S4 domain BJD11_RS10285 PF04079 Segregation and condensation complex subunit ScpB BJD11_RS10290 PF02616 Segregation and condensation protein ScpA BJD11_RS10295 PF03795 YCII-related domain BJD11_RS10305 PF00356 Bacterial regulatory proteins, lacI family BJD11_RS10325 PF00528 Binding-protein-dependent transport system inner membrane component BJD11_RS10330 PF00528 Binding-protein-dependent transport system inner membrane component BJD11_RS10355 PF00795 Carbon-nitrogen hydrolase BJD11_RS10360 PF04371 Porphyromonas-type peptidyl-arginine deiminase BJD11_RS10370 PF00444 Ribosomal protein L36 BJD11_RS10375 PF02224 Cytidylate kinase BJD11_RS10380 PF00575 S1 RNA binding domain BJD11_RS10385 PF00216 Bacterial DNA-binding protein BJD11_RS10395 PF18073 Rubredoxin metal binding domain BJD11_RS10400 PF00953 Glycosyl transferase family 4 BJD11_RS10405 PF02719 Polysaccharide biosynthesis protein BJD11_RS10410 PF00483 Nucleotidyl transferase BJD11_RS10415 PF02254 TrkA-N domain BJD11_RS10415 PF00999 Sodium/hydrogen exchanger family BJD11_RS10425 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BJD11_RS10425 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BJD11_RS10430 PF00571 CBS domain BJD11_RS10430 PF00478 IMP dehydrogenase / GMP reductase domain BJD11_RS10435 PF02540 NAD synthase BJD11_RS10435 PF00958 GMP synthase C terminal domain BJD11_RS10435 PF00117 Glutamine amidotransferase class-I BJD11_RS10445 PF00589 Phage integrase family BJD11_RS10445 PF13356 Arm DNA-binding domain BJD11_RS10475 PF13333 Integrase core domain BJD11_RS10475 PF00665 Integrase core domain BJD11_RS10475 PF13276 HTH-like domain BJD11_RS10485 PF01695 IstB-like ATP binding protein BJD11_RS10515 PF02303 Helix-destabilising protein BJD11_RS10525 PF17091 Inovirus G7P protein BJD11_RS10645 PF01527 Transposase BJD11_RS10650 PF13276 HTH-like domain BJD11_RS10650 PF13683 Integrase core domain BJD11_RS10660 PF07859 alpha/beta hydrolase fold BJD11_RS10670 PF00753 Metallo-beta-lactamase superfamily BJD11_RS10675 PF04143 Sulphur transport BJD11_RS10690 PF01925 Sulfite exporter TauE/SafE BJD11_RS10700 PF13406 Transglycosylase SLT domain BJD11_RS10705 PF13700 Domain of unknown function (DUF4158) BJD11_RS10705 PF01526 Tn3 transposase DDE domain BJD11_RS10730 PF05598 Transposase domain (DUF772) BJD11_RS10735 PF00873 AcrB/AcrD/AcrF family BJD11_RS10740 PF00529 HlyD membrane-fusion protein of T1SS BJD11_RS10740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD11_RS10755 PF01106 NifU-like domain BJD11_RS10760 PF01329 Pterin 4 alpha carbinolamine dehydratase BJD11_RS10770 PF02535 ZIP Zinc transporter BJD11_RS10775 PF11737 Protein of unknown function (DUF3300) BJD11_RS10780 PF00849 RNA pseudouridylate synthase BJD11_RS10780 PF01479 S4 domain BJD11_RS10785 PF12111 Polyribonucleotide phosphorylase C terminal BJD11_RS10785 PF10150 Ribonuclease E/G family BJD11_RS10785 PF00575 S1 RNA binding domain BJD11_RS10790 PF00196 Bacterial regulatory proteins, luxR family BJD11_RS10790 PF00072 Response regulator receiver domain BJD11_RS10795 PF17773 UPF0176 acylphosphatase like domain BJD11_RS10795 PF00581 Rhodanese-like domain BJD11_RS10805 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BJD11_RS10815 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BJD11_RS10815 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BJD11_RS10815 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BJD11_RS10840 PF13333 Integrase core domain BJD11_RS10840 PF00665 Integrase core domain BJD11_RS10840 PF13276 HTH-like domain BJD11_RS10880 PF00436 Single-strand binding protein family BJD11_RS10885 PF01751 Toprim domain BJD11_RS10885 PF01131 DNA topoisomerase BJD11_RS10890 PF00145 C-5 cytosine-specific DNA methylase BJD11_RS10950 PF01526 Tn3 transposase DDE domain BJD11_RS10950 PF13700 Domain of unknown function (DUF4158) BJD11_RS10965 PF00665 Integrase core domain BJD11_RS10965 PF13936 Helix-turn-helix domain BJD11_RS10990 PF13683 Integrase core domain BJD11_RS10990 PF13276 HTH-like domain BJD11_RS11025 PF13276 HTH-like domain BJD11_RS11025 PF00665 Integrase core domain BJD11_RS11025 PF13333 Integrase core domain BJD11_RS11030 PF13356 Arm DNA-binding domain BJD11_RS11030 PF00589 Phage integrase family BJD11_RS11040 PF01066 CDP-alcohol phosphatidyltransferase BJD11_RS11045 PF02151 UvrB/uvrC motif BJD11_RS11045 PF01541 GIY-YIG catalytic domain BJD11_RS11045 PF08459 UvrC Helix-hairpin-helix N-terminal BJD11_RS11055 PF01451 Low molecular weight phosphotyrosine protein phosphatase BJD11_RS11060 PF02348 Cytidylyltransferase BJD11_RS11065 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BJD11_RS11070 PF00005 ABC transporter BJD11_RS11070 PF00664 ABC transporter transmembrane region BJD11_RS11080 PF01618 MotA/TolQ/ExbB proton channel family BJD11_RS11085 PF00753 Metallo-beta-lactamase superfamily BJD11_RS11085 PF03772 Competence protein BJD11_RS11095 PF00005 ABC transporter BJD11_RS11100 PF12704 MacB-like periplasmic core domain BJD11_RS11100 PF02687 FtsX-like permease family BJD11_RS11110 PF03937 Flavinator of succinate dehydrogenase BJD11_RS11115 PF13085 2Fe-2S iron-sulfur cluster binding domain BJD11_RS11125 PF02910 Fumarate reductase flavoprotein C-term BJD11_RS11125 PF00890 FAD binding domain BJD11_RS11130 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BJD11_RS11145 PF01571 Aminomethyltransferase folate-binding domain BJD11_RS11150 PF17912 MalK OB fold domain BJD11_RS11150 PF00005 ABC transporter BJD11_RS11155 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BJD11_RS11155 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BJD11_RS11160 PF02685 Glucokinase BJD11_RS11165 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BJD11_RS11170 PF00920 Dehydratase family BJD11_RS11175 PF01081 KDPG and KHG aldolase BJD11_RS11185 PF00873 AcrB/AcrD/AcrF family BJD11_RS11190 PF00873 AcrB/AcrD/AcrF family BJD11_RS11205 PF00034 Cytochrome c BJD11_RS11260 PF13356 Arm DNA-binding domain BJD11_RS11260 PF00589 Phage integrase family BJD11_RS11275 PF00072 Response regulator receiver domain BJD11_RS11275 PF09308 LuxQ, periplasmic BJD11_RS11275 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS11275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS11280 PF16921 Tex protein YqgF-like domain BJD11_RS11280 PF17674 HHH domain BJD11_RS11280 PF09371 Tex-like protein N-terminal domain BJD11_RS11280 PF00575 S1 RNA binding domain BJD11_RS11290 PF01266 FAD dependent oxidoreductase BJD11_RS11290 PF00355 Rieske [2Fe-2S] domain BJD11_RS11305 PF00561 alpha/beta hydrolase fold BJD11_RS11315 PF01066 CDP-alcohol phosphatidyltransferase BJD11_RS11335 PF03618 Kinase/pyrophosphorylase BJD11_RS11340 PF00391 PEP-utilising enzyme, mobile domain BJD11_RS11340 PF02896 PEP-utilising enzyme, TIM barrel domain BJD11_RS11340 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BJD11_RS11345 PF05552 Conserved TM helix BJD11_RS11345 PF00924 Mechanosensitive ion channel BJD11_RS11350 PF00929 Exonuclease BJD11_RS11355 PF14437 MafB19-like deaminase BJD11_RS11360 PF02742 Iron dependent repressor, metal binding and dimerisation domain BJD11_RS11360 PF01325 Iron dependent repressor, N-terminal DNA binding domain BJD11_RS11365 PF01566 Natural resistance-associated macrophage protein BJD11_RS11370 PF00561 alpha/beta hydrolase fold BJD11_RS11385 PF05977 Transmembrane secretion effector BJD11_RS11390 PF07969 Amidohydrolase family BJD11_RS11400 PF00857 Isochorismatase family BJD11_RS11410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS11410 PF07730 Histidine kinase BJD11_RS11415 PF00196 Bacterial regulatory proteins, luxR family BJD11_RS11415 PF00072 Response regulator receiver domain BJD11_RS11430 PF03466 LysR substrate binding domain BJD11_RS11430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS11435 PF03601 Conserved hypothetical protein 698 BJD11_RS11440 PF14525 AraC-binding-like domain BJD11_RS11440 PF12833 Helix-turn-helix domain BJD11_RS11445 PF00067 Cytochrome P450 BJD11_RS11450 PF00111 2Fe-2S iron-sulfur cluster binding domain BJD11_RS11455 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD11_RS11455 PF14759 Reductase C-terminal BJD11_RS11460 PF03466 LysR substrate binding domain BJD11_RS11460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS11465 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BJD11_RS11465 PF00361 Proton-conducting membrane transporter BJD11_RS11465 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BJD11_RS11470 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BJD11_RS11480 PF00248 Aldo/keto reductase family BJD11_RS11485 PF03466 LysR substrate binding domain BJD11_RS11485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS11500 PF03352 Methyladenine glycosylase BJD11_RS11515 PF17191 RecG wedge domain BJD11_RS11515 PF13749 Putative ATP-dependent DNA helicase recG C-terminal BJD11_RS11515 PF00270 DEAD/DEAH box helicase BJD11_RS11525 PF10544 T5orf172 domain BJD11_RS11575 PF13276 HTH-like domain BJD11_RS11575 PF00665 Integrase core domain BJD11_RS11575 PF13333 Integrase core domain BJD11_RS11580 PF03421 YopJ Serine/Threonine acetyltransferase BJD11_RS11585 PF07730 Histidine kinase BJD11_RS11585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS11585 PF13492 GAF domain BJD11_RS11585 PF13185 GAF domain BJD11_RS11595 PF00072 Response regulator receiver domain BJD11_RS11595 PF00196 Bacterial regulatory proteins, luxR family BJD11_RS11605 PF00196 Bacterial regulatory proteins, luxR family BJD11_RS11605 PF00072 Response regulator receiver domain BJD11_RS11610 PF00067 Cytochrome P450 BJD11_RS11615 PF05199 GMC oxidoreductase BJD11_RS11615 PF00732 GMC oxidoreductase BJD11_RS11625 PF00486 Transcriptional regulatory protein, C terminal BJD11_RS11625 PF00072 Response regulator receiver domain BJD11_RS11630 PF03150 Di-haem cytochrome c peroxidase BJD11_RS11630 PF00034 Cytochrome c BJD11_RS11635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS11635 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS11640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS11640 PF03466 LysR substrate binding domain BJD11_RS11645 PF06812 ImpA, N-terminal, type VI secretion system BJD11_RS11660 PF00069 Protein kinase domain BJD11_RS11675 PF14331 ImcF-related N-terminal domain BJD11_RS11675 PF06761 Intracellular multiplication and human macrophage-killing BJD11_RS11675 PF06744 Type VI secretion protein IcmF C-terminal BJD11_RS11685 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE BJD11_RS11700 PF04717 Type VI secretion system, phage-baseplate injector BJD11_RS11700 PF06715 Gp5 C-terminal repeat (3 copies) BJD11_RS11730 PF00004 ATPase family associated with various cellular activities (AAA) BJD11_RS11730 PF07724 AAA domain (Cdc48 subfamily) BJD11_RS11730 PF17871 AAA lid domain BJD11_RS11730 PF10431 C-terminal, D2-small domain, of ClpB protein BJD11_RS11740 PF05947 Type VI secretion system, TssF BJD11_RS11745 PF04965 Gene 25-like lysozyme BJD11_RS11750 PF07024 ImpE protein BJD11_RS11755 PF05638 Type VI secretion system effector, Hcp BJD11_RS11760 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath BJD11_RS11765 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 BJD11_RS11785 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BJD11_RS11790 PF07995 Glucose / Sorbosone dehydrogenase BJD11_RS11800 PF00144 Beta-lactamase BJD11_RS11805 PF04397 LytTr DNA-binding domain BJD11_RS11805 PF00072 Response regulator receiver domain BJD11_RS11810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS11810 PF07694 5TMR of 5TMR-LYT BJD11_RS11810 PF06580 Histidine kinase BJD11_RS11820 PF03797 Autotransporter beta-domain BJD11_RS11820 PF00082 Subtilase family BJD11_RS11830 PF00529 HlyD membrane-fusion protein of T1SS BJD11_RS11830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD11_RS11835 PF00873 AcrB/AcrD/AcrF family BJD11_RS11845 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS11845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS11845 PF08448 PAS fold BJD11_RS11845 PF13426 PAS domain BJD11_RS11845 PF00072 Response regulator receiver domain BJD11_RS11850 PF00196 Bacterial regulatory proteins, luxR family BJD11_RS11850 PF00072 Response regulator receiver domain BJD11_RS11855 PF12951 Passenger-associated-transport-repeat BJD11_RS11860 PF00563 EAL domain BJD11_RS11860 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS11860 PF08447 PAS fold BJD11_RS11860 PF08448 PAS fold BJD11_RS11875 PF05974 Domain of unknown function (DUF892) BJD11_RS11890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BJD11_RS11895 PF00384 Molybdopterin oxidoreductase BJD11_RS11895 PF01568 Molydopterin dinucleotide binding domain BJD11_RS11895 PF04324 BFD-like [2Fe-2S] binding domain BJD11_RS11895 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BJD11_RS11900 PF00355 Rieske [2Fe-2S] domain BJD11_RS11900 PF11723 Homotrimeric ring hydroxylase BJD11_RS11905 PF18267 Rubredoxin NAD+ reductase C-terminal domain BJD11_RS11905 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD11_RS11905 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BJD11_RS11905 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BJD11_RS11905 PF04324 BFD-like [2Fe-2S] binding domain BJD11_RS11910 PF07690 Major Facilitator Superfamily BJD11_RS11920 PF00072 Response regulator receiver domain BJD11_RS11920 PF03861 ANTAR domain BJD11_RS11925 PF14824 Sirohaem biosynthesis protein central BJD11_RS11925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BJD11_RS11925 PF10414 Sirohaem synthase dimerisation region BJD11_RS11950 PF12804 MobA-like NTP transferase domain BJD11_RS11955 PF03453 MoeA N-terminal region (domain I and II) BJD11_RS11955 PF03454 MoeA C-terminal region (domain IV) BJD11_RS11955 PF00994 Probable molybdopterin binding domain BJD11_RS11965 PF03372 Endonuclease/Exonuclease/phosphatase family BJD11_RS11975 PF00107 Zinc-binding dehydrogenase BJD11_RS11975 PF13823 Alcohol dehydrogenase GroES-associated BJD11_RS11975 PF08240 Alcohol dehydrogenase GroES-like domain BJD11_RS12010 PF00899 ThiF family BJD11_RS12015 PF03453 MoeA N-terminal region (domain I and II) BJD11_RS12015 PF00994 Probable molybdopterin binding domain BJD11_RS12015 PF03454 MoeA C-terminal region (domain IV) BJD11_RS12020 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BJD11_RS12020 PF01926 50S ribosome-binding GTPase BJD11_RS12025 PF01011 PQQ enzyme repeat BJD11_RS12025 PF13360 PQQ-like domain BJD11_RS12035 PF13464 Domain of unknown function (DUF4115) BJD11_RS12045 PF04055 Radical SAM superfamily BJD11_RS12050 PF00334 Nucleoside diphosphate kinase BJD11_RS12060 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BJD11_RS12060 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BJD11_RS12060 PF00378 Enoyl-CoA hydratase/isomerase BJD11_RS12065 PF02803 Thiolase, C-terminal domain BJD11_RS12065 PF00108 Thiolase, N-terminal domain BJD11_RS12070 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BJD11_RS12075 PF00004 ATPase family associated with various cellular activities (AAA) BJD11_RS12075 PF16193 AAA C-terminal domain BJD11_RS12075 PF12002 MgsA AAA+ ATPase C terminal BJD11_RS12090 PF03548 Outer membrane lipoprotein carrier protein LolA BJD11_RS12100 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BJD11_RS12100 PF01580 FtsK/SpoIIIE family BJD11_RS12100 PF17854 FtsK alpha domain BJD11_RS12100 PF09397 Ftsk gamma domain BJD11_RS12105 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD11_RS12120 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BJD11_RS12125 PF01176 Translation initiation factor 1A / IF-1 BJD11_RS12130 PF02861 Clp amino terminal domain, pathogenicity island component BJD11_RS12130 PF10431 C-terminal, D2-small domain, of ClpB protein BJD11_RS12130 PF17871 AAA lid domain BJD11_RS12130 PF07724 AAA domain (Cdc48 subfamily) BJD11_RS12130 PF00004 ATPase family associated with various cellular activities (AAA) BJD11_RS12135 PF02617 ATP-dependent Clp protease adaptor protein ClpS BJD11_RS12140 PF00293 NUDIX domain BJD11_RS12150 PF04356 Protein of unknown function (DUF489) BJD11_RS12155 PF12729 Four helix bundle sensory module for signal transduction BJD11_RS12155 PF00672 HAMP domain BJD11_RS12155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS12165 PF03707 Bacterial signalling protein N terminal repeat BJD11_RS12165 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS12165 PF00563 EAL domain BJD11_RS12170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS12170 PF07730 Histidine kinase BJD11_RS12175 PF00563 EAL domain BJD11_RS12175 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS12175 PF03707 Bacterial signalling protein N terminal repeat BJD11_RS12180 PF13426 PAS domain BJD11_RS12180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS12180 PF00989 PAS fold BJD11_RS12180 PF13188 PAS domain BJD11_RS12180 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS12200 PF01584 CheW-like domain BJD11_RS12200 PF00072 Response regulator receiver domain BJD11_RS12210 PF00460 Flagella basal body rod protein BJD11_RS12210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BJD11_RS12215 PF03963 Flagellar hook capping protein - N-terminal region BJD11_RS12220 PF07559 Flagellar basal body protein FlaE BJD11_RS12220 PF00460 Flagella basal body rod protein BJD11_RS12220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BJD11_RS12225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BJD11_RS12225 PF00460 Flagella basal body rod protein BJD11_RS12235 PF00460 Flagella basal body rod protein BJD11_RS12235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BJD11_RS12240 PF02107 Flagellar L-ring protein BJD11_RS12245 PF02119 Flagellar P-ring protein BJD11_RS12250 PF10135 Rod binding protein BJD11_RS12250 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BJD11_RS12260 PF00700 Bacterial flagellin C-terminal helical region BJD11_RS12260 PF00669 Bacterial flagellin N-terminal helical region BJD11_RS12265 PF00669 Bacterial flagellin N-terminal helical region BJD11_RS12265 PF00700 Bacterial flagellin C-terminal helical region BJD11_RS12270 PF02465 Flagellar hook-associated protein 2 N-terminus BJD11_RS12270 PF07195 Flagellar hook-associated protein 2 C-terminus BJD11_RS12270 PF07196 Flagellin hook IN motif BJD11_RS12275 PF02561 Flagellar protein FliS BJD11_RS12290 PF00072 Response regulator receiver domain BJD11_RS12290 PF00196 Bacterial regulatory proteins, luxR family BJD11_RS12295 PF04552 Sigma-54, DNA binding domain BJD11_RS12295 PF04963 Sigma-54 factor, core binding domain BJD11_RS12295 PF00309 Sigma-54 factor, Activator interacting domain (AID) BJD11_RS12300 PF00072 Response regulator receiver domain BJD11_RS12300 PF01339 CheB methylesterase BJD11_RS12305 PF02954 Bacterial regulatory protein, Fis family BJD11_RS12305 PF06490 Flagellar regulatory protein FleQ BJD11_RS12305 PF00158 Sigma-54 interaction domain BJD11_RS12310 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BJD11_RS12320 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BJD11_RS12320 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BJD11_RS12360 PF02348 Cytidylyltransferase BJD11_RS12365 PF05050 Methyltransferase FkbM domain BJD11_RS12370 PF00534 Glycosyl transferases group 1 BJD11_RS12370 PF00535 Glycosyl transferase family 2 BJD11_RS12375 PF02049 Flagellar hook-basal body complex protein FliE BJD11_RS12380 PF08345 Flagellar M-ring protein C-terminal BJD11_RS12380 PF01514 Secretory protein of YscJ/FliF family BJD11_RS12385 PF01706 FliG C-terminal domain BJD11_RS12385 PF14841 FliG middle domain BJD11_RS12385 PF14842 FliG N-terminal domain BJD11_RS12395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BJD11_RS12395 PF18269 T3SS EscN ATPase C-terminal domain BJD11_RS12415 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BJD11_RS12415 PF02154 Flagellar motor switch protein FliM BJD11_RS12420 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BJD11_RS12425 PF04347 Flagellar biosynthesis protein, FliO BJD11_RS12430 PF00813 FliP family BJD11_RS12435 PF01313 Bacterial export proteins, family 3 BJD11_RS12440 PF01311 Bacterial export proteins, family 1 BJD11_RS12445 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS12455 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS12460 PF03707 Bacterial signalling protein N terminal repeat BJD11_RS12460 PF00563 EAL domain BJD11_RS12460 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS12465 PF01312 FlhB HrpN YscU SpaS Family BJD11_RS12470 PF00771 FHIPEP family BJD11_RS12475 PF00448 SRP54-type protein, GTPase domain BJD11_RS12480 PF10609 NUBPL iron-transfer P-loop NTPase BJD11_RS12485 PF04542 Sigma-70 region 2 BJD11_RS12485 PF04539 Sigma-70 region 3 BJD11_RS12485 PF04545 Sigma-70, region 4 BJD11_RS12490 PF00072 Response regulator receiver domain BJD11_RS12495 PF04344 Chemotaxis phosphatase, CheZ BJD11_RS12500 PF01584 CheW-like domain BJD11_RS12500 PF00072 Response regulator receiver domain BJD11_RS12500 PF01627 Hpt domain BJD11_RS12500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS12500 PF02895 Signal transducing histidine kinase, homodimeric domain BJD11_RS12550 PF13276 HTH-like domain BJD11_RS12550 PF00665 Integrase core domain BJD11_RS12550 PF13333 Integrase core domain BJD11_RS12555 PF01527 Transposase BJD11_RS12560 PF13683 Integrase core domain BJD11_RS12560 PF13276 HTH-like domain BJD11_RS12585 PF01618 MotA/TolQ/ExbB proton channel family BJD11_RS12590 PF13677 Membrane MotB of proton-channel complex MotA/MotB BJD11_RS12590 PF00691 OmpA family BJD11_RS12595 PF13614 AAA domain BJD11_RS12600 PF01584 CheW-like domain BJD11_RS12610 PF00072 Response regulator receiver domain BJD11_RS12615 PF01627 Hpt domain BJD11_RS12615 PF09078 CheY binding BJD11_RS12615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS12615 PF02895 Signal transducing histidine kinase, homodimeric domain BJD11_RS12615 PF01584 CheW-like domain BJD11_RS12620 PF00672 HAMP domain BJD11_RS12620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS12620 PF02203 Tar ligand binding domain homologue BJD11_RS12625 PF02203 Tar ligand binding domain homologue BJD11_RS12625 PF00672 HAMP domain BJD11_RS12625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS12635 PF02203 Tar ligand binding domain homologue BJD11_RS12635 PF00672 HAMP domain BJD11_RS12635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS12640 PF02203 Tar ligand binding domain homologue BJD11_RS12640 PF00672 HAMP domain BJD11_RS12640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS12655 PF00672 HAMP domain BJD11_RS12655 PF02203 Tar ligand binding domain homologue BJD11_RS12655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS12660 PF00672 HAMP domain BJD11_RS12660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS12665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS12665 PF00672 HAMP domain BJD11_RS12665 PF02203 Tar ligand binding domain homologue BJD11_RS12670 PF00672 HAMP domain BJD11_RS12670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS12670 PF02203 Tar ligand binding domain homologue BJD11_RS12680 PF02203 Tar ligand binding domain homologue BJD11_RS12680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS12680 PF00672 HAMP domain BJD11_RS12685 PF02203 Tar ligand binding domain homologue BJD11_RS12685 PF00672 HAMP domain BJD11_RS12685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS12690 PF00672 HAMP domain BJD11_RS12690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS12690 PF02203 Tar ligand binding domain homologue BJD11_RS12695 PF02203 Tar ligand binding domain homologue BJD11_RS12695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS12695 PF00672 HAMP domain BJD11_RS12700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS12700 PF00672 HAMP domain BJD11_RS12700 PF02203 Tar ligand binding domain homologue BJD11_RS12710 PF07317 Flagellar regulator YcgR BJD11_RS12710 PF07238 PilZ domain BJD11_RS12715 PF01584 CheW-like domain BJD11_RS12725 PF02203 Tar ligand binding domain homologue BJD11_RS12725 PF00672 HAMP domain BJD11_RS12725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS12730 PF03705 CheR methyltransferase, all-alpha domain BJD11_RS12730 PF01739 CheR methyltransferase, SAM binding domain BJD11_RS12735 PF03975 CheD chemotactic sensory transduction BJD11_RS12740 PF01339 CheB methylesterase BJD11_RS12740 PF00072 Response regulator receiver domain BJD11_RS12745 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS12745 PF00563 EAL domain BJD11_RS12745 PF03707 Bacterial signalling protein N terminal repeat BJD11_RS12750 PF00561 alpha/beta hydrolase fold BJD11_RS12755 PF11791 Aconitate B N-terminal domain BJD11_RS12755 PF06434 Aconitate hydratase 2 N-terminus BJD11_RS12755 PF00330 Aconitase family (aconitate hydratase) BJD11_RS12770 PF00694 Aconitase C-terminal domain BJD11_RS12770 PF00330 Aconitase family (aconitate hydratase) BJD11_RS12780 PF13193 AMP-binding enzyme C-terminal domain BJD11_RS12780 PF00501 AMP-binding enzyme BJD11_RS12785 PF00378 Enoyl-CoA hydratase/isomerase BJD11_RS12790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS12790 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS12790 PF01627 Hpt domain BJD11_RS12790 PF00072 Response regulator receiver domain BJD11_RS12795 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS12795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS12795 PF00072 Response regulator receiver domain BJD11_RS12795 PF01627 Hpt domain BJD11_RS12800 PF00072 Response regulator receiver domain BJD11_RS12805 PF00152 tRNA synthetases class II (D, K and N) BJD11_RS12805 PF01336 OB-fold nucleic acid binding domain BJD11_RS12810 PF00472 RF-1 domain BJD11_RS12810 PF03462 PCRF domain BJD11_RS12815 PF00072 Response regulator receiver domain BJD11_RS12815 PF04397 LytTr DNA-binding domain BJD11_RS12825 PF17768 RecJ OB domain BJD11_RS12825 PF02272 DHHA1 domain BJD11_RS12825 PF01368 DHH family BJD11_RS12835 PF03449 Transcription elongation factor, N-terminal BJD11_RS12835 PF01272 Transcription elongation factor, GreA/GreB, C-term BJD11_RS12840 PF02142 MGS-like domain BJD11_RS12840 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BJD11_RS12840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BJD11_RS12850 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BJD11_RS12850 PF00117 Glutamine amidotransferase class-I BJD11_RS12855 PF05173 Dihydrodipicolinate reductase, C-terminus BJD11_RS12855 PF01113 Dihydrodipicolinate reductase, N-terminus BJD11_RS12865 PF03473 MOSC domain BJD11_RS12865 PF03475 3-alpha domain BJD11_RS12870 PF00155 Aminotransferase class I and II BJD11_RS12885 PF07664 Ferrous iron transport protein B C terminus BJD11_RS12885 PF07670 Nucleoside recognition BJD11_RS12885 PF02421 Ferrous iron transport protein B BJD11_RS12895 PF00378 Enoyl-CoA hydratase/isomerase BJD11_RS12905 PF00682 HMGL-like BJD11_RS12910 PF00106 short chain dehydrogenase BJD11_RS12915 PF09285 Elongation factor P, C-terminal BJD11_RS12915 PF08207 Elongation factor P (EF-P) KOW-like domain BJD11_RS12915 PF01132 Elongation factor P (EF-P) OB domain BJD11_RS12935 PF02913 FAD linked oxidases, C-terminal domain BJD11_RS12935 PF01565 FAD binding domain BJD11_RS12940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BJD11_RS12940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BJD11_RS12950 PF13520 Amino acid permease BJD11_RS12955 PF13520 Amino acid permease BJD11_RS12960 PF00596 Class II Aldolase and Adducin N-terminal domain BJD11_RS12965 PF03079 ARD/ARD' family BJD11_RS12985 PF01502 Phosphoribosyl-AMP cyclohydrolase BJD11_RS12985 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BJD11_RS12990 PF00977 Histidine biosynthesis protein BJD11_RS12995 PF00977 Histidine biosynthesis protein BJD11_RS13000 PF00117 Glutamine amidotransferase class-I BJD11_RS13005 PF00475 Imidazoleglycerol-phosphate dehydratase BJD11_RS13010 PF00155 Aminotransferase class I and II BJD11_RS13015 PF00815 Histidinol dehydrogenase BJD11_RS13020 PF01634 ATP phosphoribosyltransferase BJD11_RS13020 PF08029 HisG, C-terminal domain BJD11_RS13030 PF03129 Anticodon binding domain BJD11_RS13030 PF13393 Histidyl-tRNA synthetase BJD11_RS13035 PF13545 Crp-like helix-turn-helix domain BJD11_RS13035 PF00027 Cyclic nucleotide-binding domain BJD11_RS13045 PF14821 Threonine synthase N terminus BJD11_RS13045 PF00291 Pyridoxal-phosphate dependent enzyme BJD11_RS13055 PF00288 GHMP kinases N terminal domain BJD11_RS13055 PF08544 GHMP kinases C terminal BJD11_RS13060 PF01842 ACT domain BJD11_RS13060 PF00696 Amino acid kinase family BJD11_RS13060 PF00742 Homoserine dehydrogenase BJD11_RS13060 PF13840 ACT domain BJD11_RS13060 PF03447 Homoserine dehydrogenase, NAD binding domain BJD11_RS13065 PF13276 HTH-like domain BJD11_RS13065 PF13683 Integrase core domain BJD11_RS13070 PF01527 Transposase BJD11_RS13075 PF04829 Pre-toxin domain with VENN motif BJD11_RS13075 PF13332 Hemagglutinin repeat BJD11_RS13075 PF05594 Haemagluttinin repeat BJD11_RS13095 PF13276 HTH-like domain BJD11_RS13095 PF13683 Integrase core domain BJD11_RS13100 PF01527 Transposase BJD11_RS13105 PF05860 haemagglutination activity domain BJD11_RS13105 PF13332 Hemagglutinin repeat BJD11_RS13105 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain BJD11_RS13105 PF05594 Haemagluttinin repeat BJD11_RS13105 PF13018 Extended Signal Peptide of Type V secretion system BJD11_RS13110 PF05594 Haemagluttinin repeat BJD11_RS13110 PF13332 Hemagglutinin repeat BJD11_RS13110 PF05860 haemagglutination activity domain BJD11_RS13110 PF04829 Pre-toxin domain with VENN motif BJD11_RS13110 PF15526 Novel toxin 21 BJD11_RS13115 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BJD11_RS13115 PF08479 POTRA domain, ShlB-type BJD11_RS13115 PF17287 POTRA domain BJD11_RS13140 PF01527 Transposase BJD11_RS13145 PF13683 Integrase core domain BJD11_RS13145 PF13276 HTH-like domain BJD11_RS13150 PF13683 Integrase core domain BJD11_RS13150 PF13276 HTH-like domain BJD11_RS13165 PF01527 Transposase BJD11_RS13170 PF13683 Integrase core domain BJD11_RS13170 PF13276 HTH-like domain BJD11_RS13180 PF13333 Integrase core domain BJD11_RS13180 PF13276 HTH-like domain BJD11_RS13180 PF00665 Integrase core domain BJD11_RS13190 PF13276 HTH-like domain BJD11_RS13190 PF13683 Integrase core domain BJD11_RS13195 PF01527 Transposase BJD11_RS13225 PF13333 Integrase core domain BJD11_RS13225 PF00665 Integrase core domain BJD11_RS13225 PF13276 HTH-like domain BJD11_RS13250 PF13276 HTH-like domain BJD11_RS13250 PF13333 Integrase core domain BJD11_RS13250 PF00665 Integrase core domain BJD11_RS13275 PF00171 Aldehyde dehydrogenase family BJD11_RS13295 PF01180 Dihydroorotate dehydrogenase BJD11_RS13300 PF01565 FAD binding domain BJD11_RS13300 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BJD11_RS13305 PF00892 EamA-like transporter family BJD11_RS13310 PF01177 Asp/Glu/Hydantoin racemase BJD11_RS13315 PF07690 Major Facilitator Superfamily BJD11_RS13320 PF01569 PAP2 superfamily BJD11_RS13325 PF04551 GcpE protein BJD11_RS13340 PF00072 Response regulator receiver domain BJD11_RS13345 PF00150 Cellulase (glycosyl hydrolase family 5) BJD11_RS13345 PF02013 Cellulose or protein binding domain BJD11_RS13350 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS13350 PF00360 Phytochrome region BJD11_RS13350 PF00563 EAL domain BJD11_RS13350 PF01590 GAF domain BJD11_RS13355 PF00474 Sodium:solute symporter family BJD11_RS13365 PF00933 Glycosyl hydrolase family 3 N terminal domain BJD11_RS13365 PF14310 Fibronectin type III-like domain BJD11_RS13365 PF01915 Glycosyl hydrolase family 3 C-terminal domain BJD11_RS13390 PF00342 Phosphoglucose isomerase BJD11_RS13395 PF02261 Aspartate decarboxylase BJD11_RS13400 PF02569 Pantoate-beta-alanine ligase BJD11_RS13405 PF02548 Ketopantoate hydroxymethyltransferase BJD11_RS13410 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BJD11_RS13415 PF12626 Polymerase A arginine-rich C-terminus BJD11_RS13415 PF01743 Poly A polymerase head domain BJD11_RS13415 PF12627 Probable RNA and SrmB- binding site of polymerase A BJD11_RS13425 PF02649 Type I GTP cyclohydrolase folE2 BJD11_RS13430 PF01520 N-acetylmuramoyl-L-alanine amidase BJD11_RS13445 PF00083 Sugar (and other) transporter BJD11_RS13455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BJD11_RS13455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BJD11_RS13465 PF16338 Domain of unknown function (DUF4968) BJD11_RS13465 PF01055 Glycosyl hydrolases family 31 BJD11_RS13465 PF17137 Domain of unknown function (DUF5110) BJD11_RS13480 PF00942 Cellulose binding domain BJD11_RS13480 PF03442 Carbohydrate binding domain X2 BJD11_RS13495 PF03466 LysR substrate binding domain BJD11_RS13495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS13510 PF01081 KDPG and KHG aldolase BJD11_RS13515 PF13378 Enolase C-terminal domain-like BJD11_RS13515 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BJD11_RS13520 PF08450 SMP-30/Gluconolactonase/LRE-like region BJD11_RS13525 PF05035 2-keto-3-deoxy-galactonokinase BJD11_RS13530 PF00037 4Fe-4S binding domain BJD11_RS13530 PF11953 Domain of unknown function (DUF3470) BJD11_RS13540 PF00701 Dihydrodipicolinate synthetase family BJD11_RS13555 PF00578 AhpC/TSA family BJD11_RS13560 PF13638 PIN domain BJD11_RS13560 PF02562 PhoH-like protein BJD11_RS13575 PF08543 Phosphomethylpyrimidine kinase BJD11_RS13600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS13600 PF03466 LysR substrate binding domain BJD11_RS13605 PF02678 Pirin BJD11_RS13605 PF17954 Quercetinase C-terminal cupin domain BJD11_RS13610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS13610 PF13426 PAS domain BJD11_RS13610 PF08447 PAS fold BJD11_RS13625 PF02599 Global regulator protein family BJD11_RS13630 PF01411 tRNA synthetases class II (A) BJD11_RS13630 PF02272 DHHA1 domain BJD11_RS13630 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BJD11_RS13635 PF02631 RecX family BJD11_RS13645 PF00154 recA bacterial DNA recombination protein BJD11_RS13650 PF00717 Peptidase S24-like BJD11_RS13650 PF01726 LexA DNA binding domain BJD11_RS13655 PF03109 ABC1 family BJD11_RS13660 PF02464 Competence-damaged protein BJD11_RS13665 PF01926 50S ribosome-binding GTPase BJD11_RS13665 PF13167 GTP-binding GTPase N-terminal BJD11_RS13665 PF16360 GTP-binding GTPase Middle Region BJD11_RS13670 PF17209 Hfq protein BJD11_RS13680 PF00809 Pterin binding enzyme BJD11_RS13685 PF17862 AAA+ lid domain BJD11_RS13685 PF00004 ATPase family associated with various cellular activities (AAA) BJD11_RS13685 PF01434 Peptidase family M41 BJD11_RS13685 PF06480 FtsH Extracellular BJD11_RS13690 PF01728 FtsJ-like methyltransferase BJD11_RS13695 PF01985 CRS1 / YhbY (CRM) domain BJD11_RS13700 PF04430 Protein of unknown function (DUF498/DUF598) BJD11_RS13705 PF01551 Peptidase family M23 BJD11_RS13705 PF01476 LysM domain BJD11_RS13710 PF09335 SNARE associated Golgi protein BJD11_RS13720 PF01975 Survival protein SurE BJD11_RS13725 PF01713 Smr domain BJD11_RS13730 PF01142 tRNA pseudouridine synthase D (TruD) BJD11_RS13735 PF02542 YgbB family BJD11_RS13740 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BJD11_RS13745 PF04977 Septum formation initiator BJD11_RS13750 PF00113 Enolase, C-terminal TIM barrel domain BJD11_RS13750 PF03952 Enolase, N-terminal domain BJD11_RS13760 PF00793 DAHP synthetase I family BJD11_RS13765 PF00117 Glutamine amidotransferase class-I BJD11_RS13765 PF06418 CTP synthase N-terminus BJD11_RS13775 PF00986 DNA gyrase B subunit, carboxyl terminus BJD11_RS13775 PF00204 DNA gyrase B BJD11_RS13775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS13775 PF01751 Toprim domain BJD11_RS13790 PF01384 Phosphate transporter family BJD11_RS13805 PF03471 Transporter associated domain BJD11_RS13805 PF01595 Cyclin M transmembrane N-terminal domain BJD11_RS13805 PF00571 CBS domain BJD11_RS13820 PF00296 Luciferase-like monooxygenase BJD11_RS13830 PF00664 ABC transporter transmembrane region BJD11_RS13830 PF00005 ABC transporter BJD11_RS13835 PF00005 ABC transporter BJD11_RS13855 PF13579 Glycosyl transferase 4-like domain BJD11_RS13855 PF00534 Glycosyl transferases group 1 BJD11_RS13875 PF08241 Methyltransferase domain BJD11_RS13890 PF00535 Glycosyl transferase family 2 BJD11_RS13895 PF01943 Polysaccharide biosynthesis protein BJD11_RS13900 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BJD11_RS13905 PF05523 WxcM-like, C-terminal BJD11_RS13920 PF00034 Cytochrome c BJD11_RS13935 PF04542 Sigma-70 region 2 BJD11_RS13935 PF08281 Sigma-70, region 4 BJD11_RS13945 PF00082 Subtilase family BJD11_RS13950 PF01578 Cytochrome C assembly protein BJD11_RS13955 PF04995 Heme exporter protein D (CcmD) BJD11_RS13960 PF03100 CcmE BJD11_RS13965 PF01578 Cytochrome C assembly protein BJD11_RS13965 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BJD11_RS13970 PF08534 Redoxin BJD11_RS13975 PF03918 Cytochrome C biogenesis protein BJD11_RS13985 PF00072 Response regulator receiver domain BJD11_RS13985 PF13426 PAS domain BJD11_RS13985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS13990 PF06745 KaiC BJD11_RS14000 PF00158 Sigma-54 interaction domain BJD11_RS14000 PF00072 Response regulator receiver domain BJD11_RS14000 PF02954 Bacterial regulatory protein, Fis family BJD11_RS14005 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS14005 PF08448 PAS fold BJD11_RS14005 PF13188 PAS domain BJD11_RS14005 PF00072 Response regulator receiver domain BJD11_RS14005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS14015 PF01494 FAD binding domain BJD11_RS14020 PF00672 HAMP domain BJD11_RS14020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS14020 PF02203 Tar ligand binding domain homologue BJD11_RS14035 PF13333 Integrase core domain BJD11_RS14035 PF00665 Integrase core domain BJD11_RS14035 PF13276 HTH-like domain BJD11_RS14055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS14055 PF03466 LysR substrate binding domain BJD11_RS14060 PF02525 Flavodoxin-like fold BJD11_RS14065 PF02403 Seryl-tRNA synthetase N-terminal domain BJD11_RS14065 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BJD11_RS14070 PF03544 Gram-negative bacterial TonB protein C-terminal BJD11_RS14080 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BJD11_RS14085 PF01842 ACT domain BJD11_RS14085 PF01817 Chorismate mutase type II BJD11_RS14085 PF00800 Prephenate dehydratase BJD11_RS14090 PF00266 Aminotransferase class-V BJD11_RS14095 PF00174 Oxidoreductase molybdopterin binding domain BJD11_RS14100 PF01794 Ferric reductase like transmembrane component BJD11_RS14125 PF00392 Bacterial regulatory proteins, gntR family BJD11_RS14125 PF07702 UTRA domain BJD11_RS14140 PF07969 Amidohydrolase family BJD11_RS14145 PF00221 Aromatic amino acid lyase BJD11_RS14155 PF01175 Urocanase Rossmann-like domain BJD11_RS14155 PF17391 Urocanase N-terminal domain BJD11_RS14155 PF17392 Urocanase C-terminal domain BJD11_RS14165 PF13360 PQQ-like domain BJD11_RS14170 PF03989 DNA gyrase C-terminal domain, beta-propeller BJD11_RS14170 PF00521 DNA gyrase/topoisomerase IV, subunit A BJD11_RS14175 PF01008 Initiation factor 2 subunit family BJD11_RS14190 PF00152 tRNA synthetases class II (D, K and N) BJD11_RS14195 PF12826 Helix-hairpin-helix motif BJD11_RS14195 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BJD11_RS14195 PF00533 BRCA1 C Terminus (BRCT) domain BJD11_RS14195 PF01653 NAD-dependent DNA ligase adenylation domain BJD11_RS14195 PF03120 NAD-dependent DNA ligase OB-fold domain BJD11_RS14200 PF00155 Aminotransferase class I and II BJD11_RS14210 PF04354 ZipA, C-terminal FtsZ-binding domain BJD11_RS14215 PF02463 RecF/RecN/SMC N terminal domain BJD11_RS14220 PF01281 Ribosomal protein L9, N-terminal domain BJD11_RS14220 PF03948 Ribosomal protein L9, C-terminal domain BJD11_RS14225 PF01084 Ribosomal protein S18 BJD11_RS14230 PF01250 Ribosomal protein S6 BJD11_RS14235 PF01521 Iron-sulphur cluster biosynthesis BJD11_RS14245 PF00152 tRNA synthetases class II (D, K and N) BJD11_RS14245 PF01336 OB-fold nucleic acid binding domain BJD11_RS14265 PF04299 Putative FMN-binding domain BJD11_RS14270 PF00072 Response regulator receiver domain BJD11_RS14270 PF00196 Bacterial regulatory proteins, luxR family BJD11_RS14315 PF00484 Carbonic anhydrase BJD11_RS14320 PF06052 3-hydroxyanthranilic acid dioxygenase BJD11_RS14330 PF00266 Aminotransferase class-V BJD11_RS14335 PF01494 FAD binding domain BJD11_RS14345 PF08411 Exonuclease C-terminal BJD11_RS14345 PF00929 Exonuclease BJD11_RS14365 PF01513 ATP-NAD kinase BJD11_RS14370 PF01170 Putative RNA methylase family UPF0020 BJD11_RS14370 PF02926 THUMP domain BJD11_RS14370 PF10672 S-adenosylmethionine-dependent methyltransferase BJD11_RS14380 PF00005 ABC transporter BJD11_RS14410 PF00581 Rhodanese-like domain BJD11_RS14415 PF00293 NUDIX domain BJD11_RS14420 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BJD11_RS14420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BJD11_RS14425 PF00378 Enoyl-CoA hydratase/isomerase BJD11_RS14435 PF10576 Iron-sulfur binding domain of endonuclease III BJD11_RS14435 PF00730 HhH-GPD superfamily base excision DNA repair protein BJD11_RS14435 PF00633 Helix-hairpin-helix motif BJD11_RS14440 PF00916 Sulfate permease family BJD11_RS14440 PF01740 STAS domain BJD11_RS14445 PF00484 Carbonic anhydrase BJD11_RS14460 PF12849 PBP superfamily domain BJD11_RS14465 PF12849 PBP superfamily domain BJD11_RS14470 PF00528 Binding-protein-dependent transport system inner membrane component BJD11_RS14475 PF00528 Binding-protein-dependent transport system inner membrane component BJD11_RS14480 PF00005 ABC transporter BJD11_RS14485 PF01895 PhoU domain BJD11_RS14495 PF00929 Exonuclease BJD11_RS14500 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS14510 PF00588 SpoU rRNA Methylase family BJD11_RS14510 PF08032 RNA 2'-O ribose methyltransferase substrate binding BJD11_RS14525 PF17876 Cold shock domain BJD11_RS14525 PF00575 S1 RNA binding domain BJD11_RS14525 PF00773 RNB domain BJD11_RS14525 PF08206 Ribonuclease B OB domain BJD11_RS14525 PF08461 Ribonuclease R winged-helix domain BJD11_RS14550 PF02770 Acyl-CoA dehydrogenase, middle domain BJD11_RS14550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJD11_RS14550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJD11_RS14555 PF01209 ubiE/COQ5 methyltransferase family BJD11_RS14560 PF00809 Pterin binding enzyme BJD11_RS14560 PF02574 Homocysteine S-methyltransferase BJD11_RS14565 PF02574 Homocysteine S-methyltransferase BJD11_RS14565 PF00809 Pterin binding enzyme BJD11_RS14565 PF02965 Vitamin B12 dependent methionine synthase, activation domain BJD11_RS14565 PF02310 B12 binding domain BJD11_RS14565 PF02607 B12 binding domain BJD11_RS14575 PF00294 pfkB family carbohydrate kinase BJD11_RS14580 PF07690 Major Facilitator Superfamily BJD11_RS14585 PF00356 Bacterial regulatory proteins, lacI family BJD11_RS14600 PF04102 SlyX BJD11_RS14605 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BJD11_RS14605 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BJD11_RS14605 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BJD11_RS14610 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BJD11_RS14610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BJD11_RS14615 PF00255 Glutathione peroxidase BJD11_RS14625 PF00392 Bacterial regulatory proteins, gntR family BJD11_RS14630 PF00005 ABC transporter BJD11_RS14655 PF10415 Fumarase C C-terminus BJD11_RS14655 PF00206 Lyase BJD11_RS14660 PF03471 Transporter associated domain BJD11_RS14660 PF01595 Cyclin M transmembrane N-terminal domain BJD11_RS14660 PF00571 CBS domain BJD11_RS14670 PF00206 Lyase BJD11_RS14670 PF08328 Adenylosuccinate lyase C-terminal BJD11_RS14680 PF08007 Cupin superfamily protein BJD11_RS14690 PF16870 2-oxoglutarate dehydrogenase C-terminal BJD11_RS14690 PF00676 Dehydrogenase E1 component BJD11_RS14690 PF16078 2-oxoglutarate dehydrogenase N-terminus BJD11_RS14690 PF02779 Transketolase, pyrimidine binding domain BJD11_RS14695 PF02817 e3 binding domain BJD11_RS14695 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BJD11_RS14695 PF00364 Biotin-requiring enzyme BJD11_RS14700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BJD11_RS14700 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD11_RS14705 PF03641 Possible lysine decarboxylase BJD11_RS14710 PF01205 Uncharacterized protein family UPF0029 BJD11_RS14715 PF00005 ABC transporter BJD11_RS14715 PF00664 ABC transporter transmembrane region BJD11_RS14720 PF03466 LysR substrate binding domain BJD11_RS14720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS14725 PF03412 Peptidase C39 family BJD11_RS14725 PF00005 ABC transporter BJD11_RS14725 PF00664 ABC transporter transmembrane region BJD11_RS14750 PF08543 Phosphomethylpyrimidine kinase BJD11_RS14760 PF00684 DnaJ central domain BJD11_RS14760 PF01556 DnaJ C terminal domain BJD11_RS14760 PF00226 DnaJ domain BJD11_RS14765 PF00012 Hsp70 protein BJD11_RS14770 PF01025 GrpE BJD11_RS14775 PF01628 HrcA protein C terminal domain BJD11_RS14775 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding BJD11_RS14780 PF02463 RecF/RecN/SMC N terminal domain BJD11_RS14785 PF01475 Ferric uptake regulator family BJD11_RS14790 PF04355 SmpA / OmlA family BJD11_RS14795 PF03658 RnfH family Ubiquitin BJD11_RS14800 PF03364 Polyketide cyclase / dehydrase and lipid transport BJD11_RS14805 PF01668 SmpB protein BJD11_RS14830 PF13276 HTH-like domain BJD11_RS14830 PF00665 Integrase core domain BJD11_RS14830 PF13333 Integrase core domain BJD11_RS14855 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS14865 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS14870 PF02321 Outer membrane efflux protein BJD11_RS14875 PF00106 short chain dehydrogenase BJD11_RS14880 PF00873 AcrB/AcrD/AcrF family BJD11_RS14885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD11_RS14885 PF00529 HlyD membrane-fusion protein of T1SS BJD11_RS14900 PF03466 LysR substrate binding domain BJD11_RS14900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS14905 PF05736 OprF membrane domain BJD11_RS14905 PF00691 OmpA family BJD11_RS14910 PF03441 FAD binding domain of DNA photolyase BJD11_RS14910 PF00875 DNA photolyase BJD11_RS14915 PF00772 DnaB-like helicase N terminal domain BJD11_RS14915 PF03796 DnaB-like helicase C terminal domain BJD11_RS14920 PF03358 NADPH-dependent FMN reductase BJD11_RS14925 PF13537 Glutamine amidotransferase domain BJD11_RS14925 PF00733 Asparagine synthase BJD11_RS14935 PF02798 Glutathione S-transferase, N-terminal domain BJD11_RS14935 PF00043 Glutathione S-transferase, C-terminal domain BJD11_RS14945 PF02770 Acyl-CoA dehydrogenase, middle domain BJD11_RS14945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJD11_RS14945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJD11_RS14960 PF01026 TatD related DNase BJD11_RS14965 PF00899 ThiF family BJD11_RS14980 PF00313 'Cold-shock' DNA-binding domain BJD11_RS14990 PF02253 Phospholipase A1 BJD11_RS15000 PF00484 Carbonic anhydrase BJD11_RS15015 PF05681 Fumarate hydratase (Fumerase) BJD11_RS15015 PF05683 Fumarase C-terminus BJD11_RS15020 PF00005 ABC transporter BJD11_RS15025 PF00175 Oxidoreductase NAD-binding domain BJD11_RS15025 PF00970 Oxidoreductase FAD-binding domain BJD11_RS15030 PF00255 Glutathione peroxidase BJD11_RS15035 PF01432 Peptidase family M3 BJD11_RS15040 PF12802 MarR family BJD11_RS15065 PF00854 POT family BJD11_RS15075 PF01915 Glycosyl hydrolase family 3 C-terminal domain BJD11_RS15075 PF00933 Glycosyl hydrolase family 3 N terminal domain BJD11_RS15075 PF14310 Fibronectin type III-like domain BJD11_RS15075 PF07691 PA14 domain BJD11_RS15095 PF07690 Major Facilitator Superfamily BJD11_RS15100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD11_RS15100 PF00529 HlyD membrane-fusion protein of T1SS BJD11_RS15120 PF00521 DNA gyrase/topoisomerase IV, subunit A BJD11_RS15120 PF03989 DNA gyrase C-terminal domain, beta-propeller BJD11_RS15125 PF05724 Thiopurine S-methyltransferase (TPMT) BJD11_RS15130 PF00210 Ferritin-like domain BJD11_RS15135 PF01804 Penicillin amidase BJD11_RS15150 PF00733 Asparagine synthase BJD11_RS15150 PF13537 Glutamine amidotransferase domain BJD11_RS15155 PF01546 Peptidase family M20/M25/M40 BJD11_RS15155 PF07687 Peptidase dimerisation domain BJD11_RS15160 PF03960 ArsC family BJD11_RS15165 PF00132 Bacterial transferase hexapeptide (six repeats) BJD11_RS15165 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BJD11_RS15165 PF14602 Hexapeptide repeat of succinyl-transferase BJD11_RS15170 PF01909 Nucleotidyltransferase domain BJD11_RS15170 PF08335 GlnD PII-uridylyltransferase BJD11_RS15170 PF01966 HD domain BJD11_RS15175 PF00557 Metallopeptidase family M24 BJD11_RS15210 PF00318 Ribosomal protein S2 BJD11_RS15215 PF00889 Elongation factor TS BJD11_RS15220 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS15225 PF00696 Amino acid kinase family BJD11_RS15230 PF01765 Ribosome recycling factor BJD11_RS15235 PF01255 Putative undecaprenyl diphosphate synthase BJD11_RS15245 PF13288 DXP reductoisomerase C-terminal domain BJD11_RS15245 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BJD11_RS15245 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BJD11_RS15250 PF02163 Peptidase family M50 BJD11_RS15250 PF17820 PDZ domain BJD11_RS15255 PF01103 Surface antigen BJD11_RS15255 PF07244 Surface antigen variable number repeat BJD11_RS15265 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BJD11_RS15265 PF00132 Bacterial transferase hexapeptide (six repeats) BJD11_RS15270 PF07977 FabA-like domain BJD11_RS15275 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BJD11_RS15275 PF00132 Bacterial transferase hexapeptide (six repeats) BJD11_RS15280 PF02684 Lipid-A-disaccharide synthetase BJD11_RS15285 PF01351 Ribonuclease HII BJD11_RS15290 PF01351 Ribonuclease HII BJD11_RS15295 PF14579 Helix-hairpin-helix motif BJD11_RS15295 PF07733 Bacterial DNA polymerase III alpha NTPase domain BJD11_RS15295 PF01336 OB-fold nucleic acid binding domain BJD11_RS15295 PF02811 PHP domain BJD11_RS15295 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BJD11_RS15300 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BJD11_RS15315 PF03653 Uncharacterised protein family (UPF0093) BJD11_RS15335 PF03551 Transcriptional regulator PadR-like family BJD11_RS15355 PF02592 Putative vitamin uptake transporter BJD11_RS15365 PF02574 Homocysteine S-methyltransferase BJD11_RS15370 PF00324 Amino acid permease BJD11_RS15385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BJD11_RS15405 PF09334 tRNA synthetases class I (M) BJD11_RS15405 PF01588 Putative tRNA binding domain BJD11_RS15415 PF04060 Putative Fe-S cluster BJD11_RS15430 PF04545 Sigma-70, region 4 BJD11_RS15430 PF04542 Sigma-70 region 2 BJD11_RS15475 PF01042 Endoribonuclease L-PSP BJD11_RS15485 PF03706 Lysylphosphatidylglycerol synthase TM region BJD11_RS15485 PF09924 Uncharacterised conserved protein (DUF2156) BJD11_RS15520 PF07690 Major Facilitator Superfamily BJD11_RS15525 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BJD11_RS15530 PF03831 PhnA domain BJD11_RS15530 PF08274 PhnA Zinc-Ribbon BJD11_RS15565 PF01258 Prokaryotic dksA/traR C4-type zinc finger BJD11_RS15575 PF07043 Protein of unknown function (DUF1328) BJD11_RS15580 PF01863 Protein of unknown function DUF45 BJD11_RS15595 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BJD11_RS15595 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BJD11_RS15600 PF12951 Passenger-associated-transport-repeat BJD11_RS15600 PF03797 Autotransporter beta-domain BJD11_RS15600 PF00082 Subtilase family BJD11_RS15605 PF02803 Thiolase, C-terminal domain BJD11_RS15605 PF00108 Thiolase, N-terminal domain BJD11_RS15620 PF00072 Response regulator receiver domain BJD11_RS15620 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS15640 PF01068 ATP dependent DNA ligase domain BJD11_RS15640 PF04679 ATP dependent DNA ligase C terminal region BJD11_RS15640 PF04675 DNA ligase N terminus BJD11_RS15650 PF04675 DNA ligase N terminus BJD11_RS15650 PF01068 ATP dependent DNA ligase domain BJD11_RS15650 PF04679 ATP dependent DNA ligase C terminal region BJD11_RS15655 PF00271 Helicase conserved C-terminal domain BJD11_RS15655 PF08494 DEAD/H associated BJD11_RS15655 PF00270 DEAD/DEAH box helicase BJD11_RS15670 PF00313 'Cold-shock' DNA-binding domain BJD11_RS15675 PF01048 Phosphorylase superfamily BJD11_RS15680 PF00156 Phosphoribosyl transferase domain BJD11_RS15685 PF00933 Glycosyl hydrolase family 3 N terminal domain BJD11_RS15690 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BJD11_RS15695 PF01593 Flavin containing amine oxidoreductase BJD11_RS15700 PF01323 DSBA-like thioredoxin domain BJD11_RS15705 PF01928 CYTH domain BJD11_RS15710 PF05958 tRNA (Uracil-5-)-methyltransferase BJD11_RS15725 PF11967 Recombination protein O N terminal BJD11_RS15725 PF02565 Recombination protein O C terminal BJD11_RS15735 PF13683 Integrase core domain BJD11_RS15735 PF13276 HTH-like domain BJD11_RS15740 PF01527 Transposase BJD11_RS15750 PF01926 50S ribosome-binding GTPase BJD11_RS15750 PF07650 KH domain BJD11_RS15755 PF00035 Double-stranded RNA binding motif BJD11_RS15755 PF14622 Ribonuclease-III-like BJD11_RS15765 PF10502 Signal peptidase, peptidase S26 BJD11_RS15770 PF00679 Elongation factor G C-terminus BJD11_RS15770 PF00009 Elongation factor Tu GTP binding domain BJD11_RS15770 PF03144 Elongation factor Tu domain 2 BJD11_RS15770 PF06421 GTP-binding protein LepA C-terminus BJD11_RS15785 PF08281 Sigma-70, region 4 BJD11_RS15785 PF04542 Sigma-70 region 2 BJD11_RS15790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BJD11_RS15790 PF00378 Enoyl-CoA hydratase/isomerase BJD11_RS15790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BJD11_RS15795 PF01545 Cation efflux family BJD11_RS15800 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BJD11_RS15800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BJD11_RS15805 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BJD11_RS15805 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BJD11_RS15805 PF00378 Enoyl-CoA hydratase/isomerase BJD11_RS15810 PF00378 Enoyl-CoA hydratase/isomerase BJD11_RS15815 PF02770 Acyl-CoA dehydrogenase, middle domain BJD11_RS15815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJD11_RS15815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJD11_RS15820 PF00171 Aldehyde dehydrogenase family BJD11_RS15825 PF09856 Predicted transcriptional regulator (DUF2083) BJD11_RS15825 PF06114 IrrE N-terminal-like domain BJD11_RS15825 PF01381 Helix-turn-helix BJD11_RS15835 PF07745 Glycosyl hydrolase family 53 BJD11_RS15840 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BJD11_RS15840 PF00703 Glycosyl hydrolases family 2 BJD11_RS15840 PF02837 Glycosyl hydrolases family 2, sugar binding domain BJD11_RS15840 PF16355 Domain of unknown function (DUF4982) BJD11_RS15840 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BJD11_RS15855 PF01527 Transposase BJD11_RS15860 PF13683 Integrase core domain BJD11_RS15860 PF13276 HTH-like domain BJD11_RS15875 PF00488 MutS domain V BJD11_RS15875 PF01624 MutS domain I BJD11_RS15875 PF05192 MutS domain III BJD11_RS15875 PF05188 MutS domain II BJD11_RS15875 PF05190 MutS family domain IV BJD11_RS15885 PF00141 Peroxidase BJD11_RS15890 PF01479 S4 domain BJD11_RS15910 PF01554 MatE BJD11_RS15915 PF01245 Ribosomal protein L19 BJD11_RS15920 PF01746 tRNA (Guanine-1)-methyltransferase BJD11_RS15925 PF01782 RimM N-terminal domain BJD11_RS15925 PF05239 PRC-barrel domain BJD11_RS15930 PF00886 Ribosomal protein S16 BJD11_RS15935 PF01063 Amino-transferase class IV BJD11_RS15945 PF02978 Signal peptide binding domain BJD11_RS15945 PF00448 SRP54-type protein, GTPase domain BJD11_RS15945 PF02881 SRP54-type protein, helical bundle domain BJD11_RS15950 PF01578 Cytochrome C assembly protein BJD11_RS15955 PF01263 Aldose 1-epimerase BJD11_RS15960 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BJD11_RS15965 PF00072 Response regulator receiver domain BJD11_RS15970 PF00072 Response regulator receiver domain BJD11_RS15970 PF13426 PAS domain BJD11_RS15970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS15975 PF00672 HAMP domain BJD11_RS15975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS15975 PF01627 Hpt domain BJD11_RS15975 PF00072 Response regulator receiver domain BJD11_RS15975 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BJD11_RS15975 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS15980 PF01739 CheR methyltransferase, SAM binding domain BJD11_RS15980 PF03705 CheR methyltransferase, all-alpha domain BJD11_RS15985 PF01339 CheB methylesterase BJD11_RS15990 PF13492 GAF domain BJD11_RS15990 PF13493 Domain of unknown function (DUF4118) BJD11_RS15990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS15990 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS15990 PF02702 Osmosensitive K+ channel His kinase sensor domain BJD11_RS15995 PF07237 Protein of unknown function (DUF1428) BJD11_RS16000 PF00085 Thioredoxin BJD11_RS16005 PF00593 TonB dependent receptor BJD11_RS16005 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS16010 PF04616 Glycosyl hydrolases family 43 BJD11_RS16010 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BJD11_RS16015 PF13188 PAS domain BJD11_RS16015 PF00072 Response regulator receiver domain BJD11_RS16015 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS16015 PF08448 PAS fold BJD11_RS16015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS16020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS16020 PF00072 Response regulator receiver domain BJD11_RS16020 PF17149 Periplasmic sensor domain found in signal transduction proteins BJD11_RS16020 PF01627 Hpt domain BJD11_RS16020 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS16020 PF00672 HAMP domain BJD11_RS16030 PF13581 Histidine kinase-like ATPase domain BJD11_RS16035 PF01740 STAS domain BJD11_RS16040 PF08678 Rsbr N terminal BJD11_RS16040 PF01740 STAS domain BJD11_RS16050 PF00183 Hsp90 protein BJD11_RS16050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS16055 PF12833 Helix-turn-helix domain BJD11_RS16065 PF05656 Protein of unknown function (DUF805) BJD11_RS16070 PF18073 Rubredoxin metal binding domain BJD11_RS16080 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BJD11_RS16085 PF00510 Cytochrome c oxidase subunit III BJD11_RS16090 PF00115 Cytochrome C and Quinol oxidase polypeptide I BJD11_RS16105 PF02401 LytB protein BJD11_RS16110 PF01252 Signal peptidase (SPase) II BJD11_RS16115 PF08264 Anticodon-binding domain of tRNA BJD11_RS16115 PF00133 tRNA synthetases class I (I, L, M and V) BJD11_RS16115 PF06827 Zinc finger found in FPG and IleRS BJD11_RS16120 PF06574 FAD synthetase BJD11_RS16120 PF01687 Riboflavin kinase BJD11_RS16125 PF03023 Lipid II flippase MurJ BJD11_RS16130 PF01649 Ribosomal protein S20 BJD11_RS16135 PF01018 GTP1/OBG BJD11_RS16135 PF01926 50S ribosome-binding GTPase BJD11_RS16140 PF01016 Ribosomal L27 protein BJD11_RS16145 PF00829 Ribosomal prokaryotic L21 protein BJD11_RS16150 PF00005 ABC transporter BJD11_RS16150 PF17755 UvrA DNA-binding domain BJD11_RS16150 PF17760 UvrA interaction domain BJD11_RS16165 PF00378 Enoyl-CoA hydratase/isomerase BJD11_RS16180 PF04542 Sigma-70 region 2 BJD11_RS16180 PF08281 Sigma-70, region 4 BJD11_RS16195 PF04377 Arginine-tRNA-protein transferase, C terminus BJD11_RS16195 PF04376 Arginine-tRNA-protein transferase, N terminus BJD11_RS16215 PF02222 ATP-grasp domain BJD11_RS16240 PF00730 HhH-GPD superfamily base excision DNA repair protein BJD11_RS16255 PF00196 Bacterial regulatory proteins, luxR family BJD11_RS16255 PF00072 Response regulator receiver domain BJD11_RS16260 PF07730 Histidine kinase BJD11_RS16275 PF05209 Septum formation inhibitor MinC, N-terminal domain BJD11_RS16275 PF03775 Septum formation inhibitor MinC, C-terminal domain BJD11_RS16280 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BJD11_RS16285 PF03776 Septum formation topological specificity factor MinE BJD11_RS16295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS16295 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS16295 PF08521 Two-component sensor kinase N-terminal BJD11_RS16300 PF00486 Transcriptional regulatory protein, C terminal BJD11_RS16300 PF00072 Response regulator receiver domain BJD11_RS16315 PF00884 Sulfatase BJD11_RS16315 PF08019 Phosphoethanolamine transferase EptA/EptB BJD11_RS16335 PF07690 Major Facilitator Superfamily BJD11_RS16340 PF00664 ABC transporter transmembrane region BJD11_RS16340 PF00005 ABC transporter BJD11_RS16340 PF03412 Peptidase C39 family BJD11_RS16360 PF02347 Glycine cleavage system P-protein BJD11_RS16365 PF00135 Carboxylesterase family BJD11_RS16370 PF00248 Aldo/keto reductase family BJD11_RS16375 PF18011 C-terminal domain found in long catalases BJD11_RS16375 PF06628 Catalase-related immune-responsive BJD11_RS16375 PF00199 Catalase BJD11_RS16400 PF02311 AraC-like ligand binding domain BJD11_RS16400 PF12833 Helix-turn-helix domain BJD11_RS16420 PF00326 Prolyl oligopeptidase family BJD11_RS16420 PF07676 WD40-like Beta Propeller Repeat BJD11_RS16420 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BJD11_RS16435 PF03169 OPT oligopeptide transporter protein BJD11_RS16445 PF00326 Prolyl oligopeptidase family BJD11_RS16455 PF02811 PHP domain BJD11_RS16455 PF07733 Bacterial DNA polymerase III alpha NTPase domain BJD11_RS16455 PF14579 Helix-hairpin-helix motif BJD11_RS16455 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BJD11_RS16470 PF01726 LexA DNA binding domain BJD11_RS16470 PF00717 Peptidase S24-like BJD11_RS16505 PF00111 2Fe-2S iron-sulfur cluster binding domain BJD11_RS16505 PF01799 [2Fe-2S] binding domain BJD11_RS16510 PF00941 FAD binding domain in molybdopterin dehydrogenase BJD11_RS16510 PF03450 CO dehydrogenase flavoprotein C-terminal domain BJD11_RS16515 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BJD11_RS16515 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BJD11_RS16520 PF17755 UvrA DNA-binding domain BJD11_RS16540 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD11_RS16550 PF00106 short chain dehydrogenase BJD11_RS16560 PF17678 Glycosyl hydrolase family 92 N-terminal domain BJD11_RS16560 PF07971 Glycosyl hydrolase family 92 BJD11_RS16570 PF00723 Glycosyl hydrolases family 15 BJD11_RS16585 PF13456 Reverse transcriptase-like BJD11_RS16585 PF00300 Histidine phosphatase superfamily (branch 1) BJD11_RS16620 PF12008 Type I restriction and modification enzyme - subunit R C terminal BJD11_RS16620 PF18766 SWI2/SNF2 ATPase BJD11_RS16620 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BJD11_RS16625 PF13683 Integrase core domain BJD11_RS16625 PF13276 HTH-like domain BJD11_RS16630 PF01527 Transposase BJD11_RS16635 PF01420 Type I restriction modification DNA specificity domain BJD11_RS16645 PF12161 HsdM N-terminal domain BJD11_RS16645 PF02384 N-6 DNA Methylase BJD11_RS16695 PF00440 Bacterial regulatory proteins, tetR family BJD11_RS16710 PF11838 ERAP1-like C-terminal domain BJD11_RS16710 PF01433 Peptidase family M1 domain BJD11_RS16715 PF00709 Adenylosuccinate synthetase BJD11_RS16725 PF01145 SPFH domain / Band 7 family BJD11_RS16730 PF12221 Bacterial membrane protein N terminal BJD11_RS16730 PF01145 SPFH domain / Band 7 family BJD11_RS16735 PF00072 Response regulator receiver domain BJD11_RS16740 PF00226 DnaJ domain BJD11_RS16740 PF01556 DnaJ C terminal domain BJD11_RS16760 PF06832 Penicillin-Binding Protein C-terminus Family BJD11_RS16760 PF00905 Penicillin binding protein transpeptidase domain BJD11_RS16760 PF00912 Transglycosylase BJD11_RS16780 PF07703 Alpha-2-macroglobulin bait region domain BJD11_RS16780 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain BJD11_RS16780 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain BJD11_RS16780 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain BJD11_RS16780 PF17962 Bacterial macroglobulin domain 6 BJD11_RS16780 PF11974 Bacterial alpha-2-macroglobulin MG3 domain BJD11_RS16780 PF00207 Alpha-2-macroglobulin family BJD11_RS16780 PF01835 MG2 domain BJD11_RS16795 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS16795 PF00593 TonB dependent receptor BJD11_RS16800 PF04303 PrpF protein BJD11_RS16810 PF00330 Aconitase family (aconitate hydratase) BJD11_RS16810 PF00694 Aconitase C-terminal domain BJD11_RS16815 PF00285 Citrate synthase, C-terminal domain BJD11_RS16825 PF02954 Bacterial regulatory protein, Fis family BJD11_RS16825 PF06506 Propionate catabolism activator BJD11_RS16825 PF00158 Sigma-54 interaction domain BJD11_RS16850 PF09115 DNA polymerase III, delta subunit, C terminal BJD11_RS16855 PF02618 YceG-like family BJD11_RS16860 PF04715 Anthranilate synthase component I, N terminal region BJD11_RS16860 PF00425 chorismate binding enzyme BJD11_RS16865 PF02801 Beta-ketoacyl synthase, C-terminal domain BJD11_RS16865 PF00109 Beta-ketoacyl synthase, N-terminal domain BJD11_RS16870 PF00550 Phosphopantetheine attachment site BJD11_RS16880 PF00698 Acyl transferase domain BJD11_RS16890 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BJD11_RS16890 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BJD11_RS16895 PF01783 Ribosomal L32p protein family BJD11_RS16905 PF02545 Maf-like protein BJD11_RS16910 PF13683 Integrase core domain BJD11_RS16910 PF13276 HTH-like domain BJD11_RS16915 PF01527 Transposase BJD11_RS16920 PF02545 Maf-like protein BJD11_RS16935 PF07726 ATPase family associated with various cellular activities (AAA) BJD11_RS16935 PF17863 AAA lid domain BJD11_RS16945 PF01841 Transglutaminase-like superfamily BJD11_RS16945 PF13559 Domain of unknown function (DUF4129) BJD11_RS16945 PF11992 Domain of unknown function (DUF3488) BJD11_RS16955 PF01230 HIT domain BJD11_RS16960 PF02132 RecR protein BJD11_RS16960 PF13662 Toprim domain BJD11_RS16965 PF02575 YbaB/EbfC DNA-binding family BJD11_RS16970 PF12169 DNA polymerase III subunits gamma and tau domain III BJD11_RS16970 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BJD11_RS16970 PF12170 DNA polymerase III tau subunit V interacting with alpha BJD11_RS17015 PF13276 HTH-like domain BJD11_RS17015 PF13333 Integrase core domain BJD11_RS17015 PF00665 Integrase core domain BJD11_RS17035 PF04002 RadC-like JAB domain BJD11_RS17040 PF13683 Integrase core domain BJD11_RS17040 PF13276 HTH-like domain BJD11_RS17045 PF01527 Transposase BJD11_RS17060 PF01555 DNA methylase BJD11_RS17080 PF02391 MoaE protein BJD11_RS17085 PF02597 ThiS family BJD11_RS17090 PF01967 MoaC family BJD11_RS17100 PF06463 Molybdenum Cofactor Synthesis C BJD11_RS17100 PF04055 Radical SAM superfamily BJD11_RS17105 PF12706 Beta-lactamase superfamily domain BJD11_RS17105 PF00753 Metallo-beta-lactamase superfamily BJD11_RS17115 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BJD11_RS17140 PF13683 Integrase core domain BJD11_RS17140 PF13276 HTH-like domain BJD11_RS17145 PF01527 Transposase BJD11_RS17150 PF01527 Transposase BJD11_RS17155 PF13276 HTH-like domain BJD11_RS17155 PF13683 Integrase core domain BJD11_RS17160 PF02384 N-6 DNA Methylase BJD11_RS17170 PF03389 MobA/MobL family BJD11_RS17170 PF16793 RepB DNA-primase from phage plasmid BJD11_RS17190 PF00929 Exonuclease BJD11_RS17195 PF00075 RNase H BJD11_RS17205 PF00753 Metallo-beta-lactamase superfamily BJD11_RS17205 PF16123 Hydroxyacylglutathione hydrolase C-terminus BJD11_RS17210 PF01476 LysM domain BJD11_RS17210 PF05257 CHAP domain BJD11_RS17235 PF00216 Bacterial DNA-binding protein BJD11_RS17240 PF02190 ATP-dependent protease La (LON) substrate-binding domain BJD11_RS17240 PF05362 Lon protease (S16) C-terminal proteolytic domain BJD11_RS17240 PF00004 ATPase family associated with various cellular activities (AAA) BJD11_RS17245 PF10431 C-terminal, D2-small domain, of ClpB protein BJD11_RS17245 PF06689 ClpX C4-type zinc finger BJD11_RS17245 PF07724 AAA domain (Cdc48 subfamily) BJD11_RS17250 PF00574 Clp protease BJD11_RS17255 PF05697 Bacterial trigger factor protein (TF) BJD11_RS17255 PF05698 Bacterial trigger factor protein (TF) C-terminus BJD11_RS17265 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS17265 PF00989 PAS fold BJD11_RS17265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS17295 PF18324 Hypothetical protein TT1725 BJD11_RS17295 PF00180 Isocitrate/isopropylmalate dehydrogenase BJD11_RS17305 PF00462 Glutaredoxin BJD11_RS17310 PF01435 Peptidase family M48 BJD11_RS17310 PF13181 Tetratricopeptide repeat BJD11_RS17315 PF00072 Response regulator receiver domain BJD11_RS17315 PF00486 Transcriptional regulatory protein, C terminal BJD11_RS17320 PF11808 Phosphate regulon sensor protein PhoR BJD11_RS17320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS17320 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS17320 PF00989 PAS fold BJD11_RS17325 PF13089 Polyphosphate kinase N-terminal domain BJD11_RS17325 PF13090 Polyphosphate kinase C-terminal domain 2 BJD11_RS17325 PF17941 Polyphosphate kinase C-terminal domain 1 BJD11_RS17325 PF02503 Polyphosphate kinase middle domain BJD11_RS17330 PF02541 Ppx/GppA phosphatase family BJD11_RS17335 PF13439 Glycosyltransferase Family 4 BJD11_RS17335 PF00534 Glycosyl transferases group 1 BJD11_RS17340 PF01569 PAP2 superfamily BJD11_RS17345 PF00149 Calcineurin-like phosphoesterase BJD11_RS17360 PF04305 Protein of unknown function (DUF455) BJD11_RS17370 PF00156 Phosphoribosyl transferase domain BJD11_RS17385 PF02875 Mur ligase family, glutamate ligase domain BJD11_RS17385 PF08245 Mur ligase middle domain BJD11_RS17390 PF00300 Histidine phosphatase superfamily (branch 1) BJD11_RS17395 PF10459 Peptidase S46 BJD11_RS17405 PF01609 Transposase DDE domain BJD11_RS17405 PF05598 Transposase domain (DUF772) BJD11_RS17415 PF05506 Domain of unknown function (DUF756) BJD11_RS17415 PF04185 Phosphoesterase family BJD11_RS17425 PF08240 Alcohol dehydrogenase GroES-like domain BJD11_RS17425 PF00107 Zinc-binding dehydrogenase BJD11_RS17435 PF17850 CysA C-terminal regulatory domain BJD11_RS17435 PF00005 ABC transporter BJD11_RS17435 PF12857 TOBE-like domain BJD11_RS17440 PF00528 Binding-protein-dependent transport system inner membrane component BJD11_RS17445 PF00528 Binding-protein-dependent transport system inner membrane component BJD11_RS17455 PF00155 Aminotransferase class I and II BJD11_RS17465 PF00849 RNA pseudouridylate synthase BJD11_RS17475 PF00691 OmpA family BJD11_RS17475 PF00223 Photosystem I psaA/psaB protein BJD11_RS17485 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BJD11_RS17485 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD11_RS17505 PF02798 Glutathione S-transferase, N-terminal domain BJD11_RS17505 PF00043 Glutathione S-transferase, C-terminal domain BJD11_RS17510 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BJD11_RS17510 PF00056 lactate/malate dehydrogenase, NAD binding domain BJD11_RS17515 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BJD11_RS17520 PF00009 Elongation factor Tu GTP binding domain BJD11_RS17520 PF00679 Elongation factor G C-terminus BJD11_RS17520 PF03144 Elongation factor Tu domain 2 BJD11_RS17530 PF01425 Amidase BJD11_RS17540 PF01474 Class-II DAHP synthetase family BJD11_RS17560 PF02600 Disulfide bond formation protein DsbB BJD11_RS17565 PF01196 Ribosomal protein L17 BJD11_RS17570 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BJD11_RS17570 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BJD11_RS17570 PF01000 RNA polymerase Rpb3/RpoA insert domain BJD11_RS17575 PF00163 Ribosomal protein S4/S9 N-terminal domain BJD11_RS17575 PF01479 S4 domain BJD11_RS17580 PF00411 Ribosomal protein S11 BJD11_RS17585 PF00416 Ribosomal protein S13/S18 BJD11_RS17590 PF00344 SecY translocase BJD11_RS17595 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BJD11_RS17600 PF00327 Ribosomal protein L30p/L7e BJD11_RS17605 PF03719 Ribosomal protein S5, C-terminal domain BJD11_RS17605 PF00333 Ribosomal protein S5, N-terminal domain BJD11_RS17610 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BJD11_RS17615 PF00347 Ribosomal protein L6 BJD11_RS17620 PF00410 Ribosomal protein S8 BJD11_RS17625 PF00253 Ribosomal protein S14p/S29e BJD11_RS17630 PF00673 ribosomal L5P family C-terminus BJD11_RS17630 PF00281 Ribosomal protein L5 BJD11_RS17635 PF00467 KOW motif BJD11_RS17635 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BJD11_RS17640 PF00238 Ribosomal protein L14p/L23e BJD11_RS17645 PF00366 Ribosomal protein S17 BJD11_RS17650 PF00831 Ribosomal L29 protein BJD11_RS17655 PF00252 Ribosomal protein L16p/L10e BJD11_RS17660 PF00189 Ribosomal protein S3, C-terminal domain BJD11_RS17660 PF07650 KH domain BJD11_RS17665 PF00237 Ribosomal protein L22p/L17e BJD11_RS17670 PF00203 Ribosomal protein S19 BJD11_RS17675 PF00181 Ribosomal Proteins L2, RNA binding domain BJD11_RS17675 PF03947 Ribosomal Proteins L2, C-terminal domain BJD11_RS17680 PF00276 Ribosomal protein L23 BJD11_RS17685 PF00573 Ribosomal protein L4/L1 family BJD11_RS17690 PF00297 Ribosomal protein L3 BJD11_RS17695 PF00338 Ribosomal protein S10p/S20e BJD11_RS17705 PF00009 Elongation factor Tu GTP binding domain BJD11_RS17705 PF03143 Elongation factor Tu C-terminal domain BJD11_RS17705 PF03144 Elongation factor Tu domain 2 BJD11_RS17710 PF00679 Elongation factor G C-terminus BJD11_RS17710 PF00009 Elongation factor Tu GTP binding domain BJD11_RS17710 PF14492 Elongation Factor G, domain II BJD11_RS17710 PF03144 Elongation factor Tu domain 2 BJD11_RS17710 PF03764 Elongation factor G, domain IV BJD11_RS17715 PF00177 Ribosomal protein S7p/S5e BJD11_RS17720 PF00164 Ribosomal protein S12/S23 BJD11_RS17725 PF04997 RNA polymerase Rpb1, domain 1 BJD11_RS17725 PF04998 RNA polymerase Rpb1, domain 5 BJD11_RS17725 PF05000 RNA polymerase Rpb1, domain 4 BJD11_RS17725 PF04983 RNA polymerase Rpb1, domain 3 BJD11_RS17725 PF00623 RNA polymerase Rpb1, domain 2 BJD11_RS17730 PF00562 RNA polymerase Rpb2, domain 6 BJD11_RS17730 PF04561 RNA polymerase Rpb2, domain 2 BJD11_RS17730 PF04563 RNA polymerase beta subunit BJD11_RS17730 PF04560 RNA polymerase Rpb2, domain 7 BJD11_RS17730 PF10385 RNA polymerase beta subunit external 1 domain BJD11_RS17730 PF04565 RNA polymerase Rpb2, domain 3 BJD11_RS17735 PF16320 Ribosomal protein L7/L12 dimerisation domain BJD11_RS17735 PF00542 Ribosomal protein L7/L12 C-terminal domain BJD11_RS17740 PF00466 Ribosomal protein L10 BJD11_RS17745 PF00687 Ribosomal protein L1p/L10e family BJD11_RS17750 PF00298 Ribosomal protein L11, RNA binding domain BJD11_RS17750 PF03946 Ribosomal protein L11, N-terminal domain BJD11_RS17755 PF02357 Transcription termination factor nusG BJD11_RS17755 PF00467 KOW motif BJD11_RS17760 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BJD11_RS17770 PF00009 Elongation factor Tu GTP binding domain BJD11_RS17770 PF03143 Elongation factor Tu C-terminal domain BJD11_RS17770 PF03144 Elongation factor Tu domain 2 BJD11_RS17790 PF06071 Protein of unknown function (DUF933) BJD11_RS17790 PF01926 50S ribosome-binding GTPase BJD11_RS17795 PF01195 Peptidyl-tRNA hydrolase BJD11_RS17800 PF01386 Ribosomal L25p family BJD11_RS17800 PF14693 Ribosomal protein TL5, C-terminal domain BJD11_RS17805 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BJD11_RS17805 PF14572 Phosphoribosyl synthetase-associated domain BJD11_RS17815 PF00288 GHMP kinases N terminal domain BJD11_RS17815 PF08544 GHMP kinases C terminal BJD11_RS17820 PF03550 Outer membrane lipoprotein LolB BJD11_RS17830 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BJD11_RS17830 PF01488 Shikimate / quinate 5-dehydrogenase BJD11_RS17830 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BJD11_RS17835 PF03462 PCRF domain BJD11_RS17835 PF00472 RF-1 domain BJD11_RS17850 PF00994 Probable molybdopterin binding domain BJD11_RS17855 PF03976 Polyphosphate kinase 2 (PPK2) BJD11_RS17865 PF00708 Acylphosphatase BJD11_RS17870 PF08534 Redoxin BJD11_RS17875 PF03631 Virulence factor BrkB BJD11_RS17880 PF03358 NADPH-dependent FMN reductase BJD11_RS17890 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain BJD11_RS17890 PF17189 Glycosyl hydrolase family 30 beta sandwich domain BJD11_RS17900 PF04073 Aminoacyl-tRNA editing domain BJD11_RS17905 PF04151 Bacterial pre-peptidase C-terminal domain BJD11_RS17905 PF00082 Subtilase family BJD11_RS17910 PF04151 Bacterial pre-peptidase C-terminal domain BJD11_RS17910 PF00082 Subtilase family BJD11_RS17915 PF04151 Bacterial pre-peptidase C-terminal domain BJD11_RS17915 PF00082 Subtilase family BJD11_RS17920 PF01063 Amino-transferase class IV BJD11_RS17935 PF02233 NAD(P) transhydrogenase beta subunit BJD11_RS17940 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BJD11_RS17960 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BJD11_RS17960 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BJD11_RS17960 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BJD11_RS17975 PF01367 5'-3' exonuclease, C-terminal SAM fold BJD11_RS17975 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BJD11_RS17975 PF00476 DNA polymerase family A BJD11_RS17975 PF01612 3'-5' exonuclease BJD11_RS17980 PF00293 NUDIX domain BJD11_RS17990 PF00561 alpha/beta hydrolase fold BJD11_RS17995 PF17827 PrmC N-terminal domain BJD11_RS17995 PF05175 Methyltransferase small domain BJD11_RS18000 PF00578 AhpC/TSA family BJD11_RS18000 PF10417 C-terminal domain of 1-Cys peroxiredoxin BJD11_RS18005 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD11_RS18005 PF13192 Thioredoxin domain BJD11_RS18010 PF03466 LysR substrate binding domain BJD11_RS18010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS18020 PF01272 Transcription elongation factor, GreA/GreB, C-term BJD11_RS18020 PF14760 Rnk N-terminus BJD11_RS18025 PF00923 Transaldolase/Fructose-6-phosphate aldolase BJD11_RS18035 PF01625 Peptide methionine sulfoxide reductase BJD11_RS18045 PF00196 Bacterial regulatory proteins, luxR family BJD11_RS18045 PF00072 Response regulator receiver domain BJD11_RS18050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS18050 PF17149 Periplasmic sensor domain found in signal transduction proteins BJD11_RS18050 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS18050 PF01627 Hpt domain BJD11_RS18050 PF00672 HAMP domain BJD11_RS18050 PF00072 Response regulator receiver domain BJD11_RS18055 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS18055 PF00072 Response regulator receiver domain BJD11_RS18070 PF00749 tRNA synthetases class I (E and Q), catalytic domain BJD11_RS18070 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BJD11_RS18080 PF00892 EamA-like transporter family BJD11_RS18105 PF01728 FtsJ-like methyltransferase BJD11_RS18105 PF18125 RlmM ferredoxin-like domain BJD11_RS18110 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BJD11_RS18110 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BJD11_RS18115 PF08450 SMP-30/Gluconolactonase/LRE-like region BJD11_RS18135 PF00378 Enoyl-CoA hydratase/isomerase BJD11_RS18140 PF00171 Aldehyde dehydrogenase family BJD11_RS18145 PF13193 AMP-binding enzyme C-terminal domain BJD11_RS18145 PF00501 AMP-binding enzyme BJD11_RS18150 PF03466 LysR substrate binding domain BJD11_RS18150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS18155 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BJD11_RS18155 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit BJD11_RS18160 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BJD11_RS18165 PF07729 FCD domain BJD11_RS18165 PF00392 Bacterial regulatory proteins, gntR family BJD11_RS18185 PF01494 FAD binding domain BJD11_RS18190 PF01494 FAD binding domain BJD11_RS18205 PF01923 Cobalamin adenosyltransferase BJD11_RS18210 PF00850 Histone deacetylase domain BJD11_RS18215 PF03968 OstA-like protein BJD11_RS18215 PF04453 LPS transport system D BJD11_RS18220 PF00639 PPIC-type PPIASE domain BJD11_RS18220 PF09312 SurA N-terminal domain BJD11_RS18225 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BJD11_RS18230 PF00398 Ribosomal RNA adenine dimethylase BJD11_RS18235 PF04379 ApaG domain BJD11_RS18240 PF00149 Calcineurin-like phosphoesterase BJD11_RS18245 PF00186 Dihydrofolate reductase BJD11_RS18255 PF00303 Thymidylate synthase BJD11_RS18260 PF01790 Prolipoprotein diacylglyceryl transferase BJD11_RS18280 PF01219 Prokaryotic diacylglycerol kinase BJD11_RS18290 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS18290 PF08521 Two-component sensor kinase N-terminal BJD11_RS18290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS18295 PF00486 Transcriptional regulatory protein, C terminal BJD11_RS18295 PF00072 Response regulator receiver domain BJD11_RS18300 PF13472 GDSL-like Lipase/Acylhydrolase family BJD11_RS18305 PF00005 ABC transporter BJD11_RS18315 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BJD11_RS18325 PF00005 ABC transporter BJD11_RS18330 PF00528 Binding-protein-dependent transport system inner membrane component BJD11_RS18350 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS18350 PF00593 TonB dependent receptor BJD11_RS18360 PF00248 Aldo/keto reductase family BJD11_RS18370 PF07662 Na+ dependent nucleoside transporter C-terminus BJD11_RS18370 PF01773 Na+ dependent nucleoside transporter N-terminus BJD11_RS18370 PF07670 Nucleoside recognition BJD11_RS18375 PF00294 pfkB family carbohydrate kinase BJD11_RS18385 PF01207 Dihydrouridine synthase (Dus) BJD11_RS18390 PF13649 Methyltransferase domain BJD11_RS18400 PF02773 S-adenosylmethionine synthetase, C-terminal domain BJD11_RS18400 PF00438 S-adenosylmethionine synthetase, N-terminal domain BJD11_RS18400 PF02772 S-adenosylmethionine synthetase, central domain BJD11_RS18405 PF00328 Histidine phosphatase superfamily (branch 2) BJD11_RS18420 PF01389 OmpA-like transmembrane domain BJD11_RS18420 PF00691 OmpA family BJD11_RS18440 PF00311 Phosphoenolpyruvate carboxylase BJD11_RS18450 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BJD11_RS18450 PF05221 S-adenosyl-L-homocysteine hydrolase BJD11_RS18455 PF13649 Methyltransferase domain BJD11_RS18485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BJD11_RS18495 PF00082 Subtilase family BJD11_RS18495 PF09286 Pro-kumamolisin, activation domain BJD11_RS18500 PF14765 Polyketide synthase dehydratase BJD11_RS18500 PF00107 Zinc-binding dehydrogenase BJD11_RS18500 PF16197 Ketoacyl-synthetase C-terminal extension BJD11_RS18500 PF00109 Beta-ketoacyl synthase, N-terminal domain BJD11_RS18500 PF02801 Beta-ketoacyl synthase, C-terminal domain BJD11_RS18500 PF08659 KR domain BJD11_RS18500 PF00550 Phosphopantetheine attachment site BJD11_RS18500 PF00698 Acyl transferase domain BJD11_RS18500 PF08240 Alcohol dehydrogenase GroES-like domain BJD11_RS18515 PF02219 Methylenetetrahydrofolate reductase BJD11_RS18525 PF00293 NUDIX domain BJD11_RS18530 PF02810 SEC-C motif BJD11_RS18530 PF07517 SecA DEAD-like domain BJD11_RS18530 PF01043 SecA preprotein cross-linking domain BJD11_RS18530 PF07516 SecA Wing and Scaffold domain BJD11_RS18535 PF01551 Peptidase family M23 BJD11_RS18535 PF08525 Opacity-associated protein A N-terminal motif BJD11_RS18535 PF01476 LysM domain BJD11_RS18545 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BJD11_RS18550 PF00091 Tubulin/FtsZ family, GTPase domain BJD11_RS18550 PF12327 FtsZ family, C-terminal domain BJD11_RS18555 PF02491 SHS2 domain inserted in FTSA BJD11_RS18560 PF03799 Cell division protein FtsQ BJD11_RS18560 PF08478 POTRA domain, FtsQ-type BJD11_RS18565 PF01820 D-ala D-ala ligase N-terminus BJD11_RS18565 PF07478 D-ala D-ala ligase C-terminus BJD11_RS18570 PF08245 Mur ligase middle domain BJD11_RS18570 PF01225 Mur ligase family, catalytic domain BJD11_RS18570 PF02875 Mur ligase family, glutamate ligase domain BJD11_RS18575 PF04101 Glycosyltransferase family 28 C-terminal domain BJD11_RS18575 PF03033 Glycosyltransferase family 28 N-terminal domain BJD11_RS18580 PF01098 Cell cycle protein BJD11_RS18585 PF00953 Glycosyl transferase family 4 BJD11_RS18590 PF08245 Mur ligase middle domain BJD11_RS18590 PF01225 Mur ligase family, catalytic domain BJD11_RS18590 PF02875 Mur ligase family, glutamate ligase domain BJD11_RS18595 PF08245 Mur ligase middle domain BJD11_RS18595 PF02875 Mur ligase family, glutamate ligase domain BJD11_RS18595 PF01225 Mur ligase family, catalytic domain BJD11_RS18600 PF03717 Penicillin-binding Protein dimerisation domain BJD11_RS18600 PF00905 Penicillin binding protein transpeptidase domain BJD11_RS18610 PF04999 Cell division protein FtsL BJD11_RS18615 PF01795 MraW methylase family BJD11_RS18620 PF02381 MraZ protein, putative antitoxin-like BJD11_RS18645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BJD11_RS18655 PF02021 Uncharacterised protein family UPF0102 BJD11_RS18660 PF04307 LexA-binding, inner membrane-associated putative hydrolase BJD11_RS18665 PF01565 FAD binding domain BJD11_RS18665 PF02913 FAD linked oxidases, C-terminal domain BJD11_RS18675 PF00486 Transcriptional regulatory protein, C terminal BJD11_RS18675 PF00072 Response regulator receiver domain BJD11_RS18680 PF02702 Osmosensitive K+ channel His kinase sensor domain BJD11_RS18680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS18680 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS18680 PF13493 Domain of unknown function (DUF4118) BJD11_RS18680 PF13492 GAF domain BJD11_RS18685 PF02669 K+-transporting ATPase, c chain BJD11_RS18695 PF03814 Potassium-transporting ATPase A subunit BJD11_RS18720 PF02769 AIR synthase related protein, C-terminal domain BJD11_RS18720 PF00586 AIR synthase related protein, N-terminal domain BJD11_RS18725 PF01029 NusB family BJD11_RS18730 PF00885 6,7-dimethyl-8-ribityllumazine synthase BJD11_RS18735 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BJD11_RS18735 PF00925 GTP cyclohydrolase II BJD11_RS18740 PF00677 Lumazine binding domain BJD11_RS18750 PF01872 RibD C-terminal domain BJD11_RS18750 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BJD11_RS18760 PF03477 ATP cone domain BJD11_RS18770 PF00464 Serine hydroxymethyltransferase BJD11_RS18780 PF12848 ABC transporter BJD11_RS18780 PF00005 ABC transporter BJD11_RS18790 PF00756 Putative esterase BJD11_RS18795 PF04828 Glutathione-dependent formaldehyde-activating enzyme BJD11_RS18800 PF08240 Alcohol dehydrogenase GroES-like domain BJD11_RS18800 PF00107 Zinc-binding dehydrogenase BJD11_RS18805 PF02583 Metal-sensitive transcriptional repressor BJD11_RS18820 PF00072 Response regulator receiver domain BJD11_RS18820 PF00486 Transcriptional regulatory protein, C terminal BJD11_RS18825 PF00672 HAMP domain BJD11_RS18825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS18825 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS18830 PF04107 Glutamate-cysteine ligase family 2(GCS2) BJD11_RS18835 PF01926 50S ribosome-binding GTPase BJD11_RS18840 PF00034 Cytochrome c BJD11_RS18850 PF01323 DSBA-like thioredoxin domain BJD11_RS18865 PF02028 BCCT, betaine/carnitine/choline family transporter BJD11_RS18870 PF00171 Aldehyde dehydrogenase family BJD11_RS18875 PF05199 GMC oxidoreductase BJD11_RS18875 PF00732 GMC oxidoreductase BJD11_RS18880 PF12627 Probable RNA and SrmB- binding site of polymerase A BJD11_RS18880 PF01743 Poly A polymerase head domain BJD11_RS18880 PF01966 HD domain BJD11_RS18895 PF01979 Amidohydrolase family BJD11_RS18900 PF01380 SIS domain BJD11_RS18905 PF00356 Bacterial regulatory proteins, lacI family BJD11_RS18910 PF07690 Major Facilitator Superfamily BJD11_RS18915 PF00392 Bacterial regulatory proteins, gntR family BJD11_RS18915 PF07702 UTRA domain BJD11_RS18935 PF03934 Type II secretion system (T2SS), protein K BJD11_RS18940 PF11612 Type II secretion system (T2SS), protein J BJD11_RS18940 PF07963 Prokaryotic N-terminal methylation motif BJD11_RS18945 PF02501 Type II secretion system (T2SS), protein I BJD11_RS18945 PF07963 Prokaryotic N-terminal methylation motif BJD11_RS18950 PF07963 Prokaryotic N-terminal methylation motif BJD11_RS18950 PF12019 Type II transport protein GspH BJD11_RS18955 PF07963 Prokaryotic N-terminal methylation motif BJD11_RS18955 PF08334 Type II secretion system (T2SS), protein G BJD11_RS18960 PF00482 Type II secretion system (T2SS), protein F BJD11_RS18965 PF00437 Type II/IV secretion system protein BJD11_RS18970 PF00263 Bacterial type II and III secretion system protein BJD11_RS18970 PF03958 Bacterial type II/III secretion system short domain BJD11_RS19010 PF00106 short chain dehydrogenase BJD11_RS19015 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BJD11_RS19020 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS19020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS19025 PF00072 Response regulator receiver domain BJD11_RS19030 PF01590 GAF domain BJD11_RS19030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS19030 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS19030 PF08446 PAS fold BJD11_RS19030 PF00360 Phytochrome region BJD11_RS19035 PF04972 BON domain BJD11_RS19040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BJD11_RS19040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BJD11_RS19045 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BJD11_RS19045 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BJD11_RS19080 PF01467 Cytidylyltransferase-like BJD11_RS19080 PF00293 NUDIX domain BJD11_RS19090 PF03466 LysR substrate binding domain BJD11_RS19090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS19100 PF17804 Tail specific protease N-terminal domain BJD11_RS19100 PF00595 PDZ domain BJD11_RS19100 PF11818 C-terminal domain of tail specific protease (DUF3340) BJD11_RS19100 PF03572 Peptidase family S41 BJD11_RS19105 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BJD11_RS19105 PF04055 Radical SAM superfamily BJD11_RS19110 PF03099 Biotin/lipoate A/B protein ligase family BJD11_RS19115 PF04359 Protein of unknown function (DUF493) BJD11_RS19125 PF00768 D-alanyl-D-alanine carboxypeptidase BJD11_RS19125 PF07943 Penicillin-binding protein 5, C-terminal domain BJD11_RS19135 PF05036 Sporulation related domain BJD11_RS19135 PF03330 Lytic transglycolase BJD11_RS19140 PF13406 Transglycosylase SLT domain BJD11_RS19150 PF00295 Glycosyl hydrolases family 28 BJD11_RS19155 PF01098 Cell cycle protein BJD11_RS19160 PF00905 Penicillin binding protein transpeptidase domain BJD11_RS19160 PF03717 Penicillin-binding Protein dimerisation domain BJD11_RS19170 PF04085 rod shape-determining protein MreC BJD11_RS19180 PF00294 pfkB family carbohydrate kinase BJD11_RS19185 PF01590 GAF domain BJD11_RS19185 PF02954 Bacterial regulatory protein, Fis family BJD11_RS19185 PF00158 Sigma-54 interaction domain BJD11_RS19195 PF08240 Alcohol dehydrogenase GroES-like domain BJD11_RS19195 PF00107 Zinc-binding dehydrogenase BJD11_RS19230 PF13276 HTH-like domain BJD11_RS19230 PF00665 Integrase core domain BJD11_RS19230 PF13333 Integrase core domain BJD11_RS19255 PF01433 Peptidase family M1 domain BJD11_RS19255 PF11838 ERAP1-like C-terminal domain BJD11_RS19260 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS19260 PF03707 Bacterial signalling protein N terminal repeat BJD11_RS19260 PF00563 EAL domain BJD11_RS19265 PF01209 ubiE/COQ5 methyltransferase family BJD11_RS19275 PF13533 Biotin-lipoyl like BJD11_RS19280 PF13673 Acetyltransferase (GNAT) domain BJD11_RS19290 PF00004 ATPase family associated with various cellular activities (AAA) BJD11_RS19290 PF10431 C-terminal, D2-small domain, of ClpB protein BJD11_RS19290 PF07724 AAA domain (Cdc48 subfamily) BJD11_RS19295 PF00227 Proteasome subunit BJD11_RS19300 PF02899 Phage integrase, N-terminal SAM-like domain BJD11_RS19300 PF00589 Phage integrase family BJD11_RS19310 PF01678 Diaminopimelate epimerase BJD11_RS19320 PF04304 Protein of unknown function (DUF454) BJD11_RS19325 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BJD11_RS19325 PF00326 Prolyl oligopeptidase family BJD11_RS19335 PF00326 Prolyl oligopeptidase family BJD11_RS19335 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BJD11_RS19375 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BJD11_RS19375 PF03900 Porphobilinogen deaminase, C-terminal domain BJD11_RS19380 PF00072 Response regulator receiver domain BJD11_RS19380 PF04397 LytTr DNA-binding domain BJD11_RS19385 PF07694 5TMR of 5TMR-LYT BJD11_RS19385 PF06580 Histidine kinase BJD11_RS19395 PF13632 Glycosyl transferase family group 2 BJD11_RS19410 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS19415 PF01740 STAS domain BJD11_RS19415 PF00916 Sulfate permease family BJD11_RS19420 PF00150 Cellulase (glycosyl hydrolase family 5) BJD11_RS19420 PF00553 Cellulose binding domain BJD11_RS19425 PF02203 Tar ligand binding domain homologue BJD11_RS19425 PF00672 HAMP domain BJD11_RS19425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD11_RS19430 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS19430 PF03707 Bacterial signalling protein N terminal repeat BJD11_RS19430 PF00563 EAL domain BJD11_RS19450 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BJD11_RS19450 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BJD11_RS19460 PF01204 Trehalase BJD11_RS19470 PF01544 CorA-like Mg2+ transporter protein BJD11_RS19480 PF00324 Amino acid permease BJD11_RS19495 PF00497 Bacterial extracellular solute-binding proteins, family 3 BJD11_RS19500 PF00892 EamA-like transporter family BJD11_RS19520 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD11_RS19525 PF02082 Transcriptional regulator BJD11_RS19530 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS19540 PF07759 Protein of unknown function (DUF1615) BJD11_RS19585 PF13409 Glutathione S-transferase, N-terminal domain BJD11_RS19595 PF00106 short chain dehydrogenase BJD11_RS19645 PF00106 short chain dehydrogenase BJD11_RS19670 PF01527 Transposase BJD11_RS19675 PF01527 Transposase BJD11_RS19680 PF13276 HTH-like domain BJD11_RS19680 PF00665 Integrase core domain BJD11_RS19680 PF13333 Integrase core domain BJD11_RS19705 PF00004 ATPase family associated with various cellular activities (AAA) BJD11_RS19710 PF00456 Transketolase, thiamine diphosphate binding domain BJD11_RS19710 PF17831 Pyruvate dehydrogenase E1 component middle domain BJD11_RS19715 PF07745 Glycosyl hydrolase family 53 BJD11_RS19745 PF13419 Haloacid dehalogenase-like hydrolase BJD11_RS19750 PF07729 FCD domain BJD11_RS19750 PF00392 Bacterial regulatory proteins, gntR family BJD11_RS19760 PF00698 Acyl transferase domain BJD11_RS19765 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BJD11_RS19770 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG BJD11_RS19780 PF01039 Carboxyl transferase domain BJD11_RS19785 PF06857 Malonate decarboxylase delta subunit (MdcD) BJD11_RS19790 PF16957 Malonate decarboxylase, alpha subunit, transporter BJD11_RS19815 PF04264 YceI-like domain BJD11_RS19820 PF00881 Nitroreductase family BJD11_RS19860 PF02592 Putative vitamin uptake transporter BJD11_RS19865 PF03710 Glutamate-ammonia ligase adenylyltransferase BJD11_RS19865 PF08335 GlnD PII-uridylyltransferase BJD11_RS19875 PF08450 SMP-30/Gluconolactonase/LRE-like region BJD11_RS19895 PF00793 DAHP synthetase I family BJD11_RS19900 PF00593 TonB dependent receptor BJD11_RS19900 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS19910 PF00118 TCP-1/cpn60 chaperonin family BJD11_RS19915 PF00166 Chaperonin 10 Kd subunit BJD11_RS19925 PF04231 Endonuclease I BJD11_RS19935 PF03091 CutA1 divalent ion tolerance protein BJD11_RS19940 PF02683 Cytochrome C biogenesis protein transmembrane region BJD11_RS19940 PF11412 Disulphide bond corrector protein DsbC BJD11_RS19945 PF01220 Dehydroquinase class II BJD11_RS19950 PF00364 Biotin-requiring enzyme BJD11_RS19960 PF00289 Biotin carboxylase, N-terminal domain BJD11_RS19960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BJD11_RS19960 PF02785 Biotin carboxylase C-terminal domain BJD11_RS19990 PF01381 Helix-turn-helix BJD11_RS20000 PF02954 Bacterial regulatory protein, Fis family BJD11_RS20035 PF00782 Dual specificity phosphatase, catalytic domain BJD11_RS20040 PF12146 Serine aminopeptidase, S33 BJD11_RS20040 PF12147 Putative methyltransferase BJD11_RS20045 PF01066 CDP-alcohol phosphatidyltransferase BJD11_RS20050 PF01808 AICARFT/IMPCHase bienzyme BJD11_RS20050 PF02142 MGS-like domain BJD11_RS20060 PF02844 Phosphoribosylglycinamide synthetase, N domain BJD11_RS20060 PF02843 Phosphoribosylglycinamide synthetase, C domain BJD11_RS20060 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BJD11_RS20065 PF12805 FUSC-like inner membrane protein yccS BJD11_RS20070 PF07690 Major Facilitator Superfamily BJD11_RS20075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS20075 PF03466 LysR substrate binding domain BJD11_RS20095 PF03186 CobD/Cbib protein BJD11_RS20095 PF17113 Regulatory signalling modulator protein AmpE BJD11_RS20100 PF00293 NUDIX domain BJD11_RS20100 PF09297 NADH pyrophosphatase zinc ribbon domain BJD11_RS20100 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain BJD11_RS20115 PF01521 Iron-sulphur cluster biosynthesis BJD11_RS20135 PF00486 Transcriptional regulatory protein, C terminal BJD11_RS20135 PF00072 Response regulator receiver domain BJD11_RS20145 PF00210 Ferritin-like domain BJD11_RS20155 PF00293 NUDIX domain BJD11_RS20170 PF00380 Ribosomal protein S9/S16 BJD11_RS20175 PF00572 Ribosomal protein L13 BJD11_RS20180 PF03232 Ubiquinone biosynthesis protein COQ7 BJD11_RS20185 PF00893 Small Multidrug Resistance protein BJD11_RS20190 PF02675 S-adenosylmethionine decarboxylase BJD11_RS20195 PF00027 Cyclic nucleotide-binding domain BJD11_RS20195 PF00325 Bacterial regulatory proteins, crp family BJD11_RS20205 PF00218 Indole-3-glycerol phosphate synthase BJD11_RS20210 PF02885 Glycosyl transferase family, helical bundle domain BJD11_RS20210 PF00591 Glycosyl transferase family, a/b domain BJD11_RS20220 PF00117 Glutamine amidotransferase class-I BJD11_RS20225 PF02384 N-6 DNA Methylase BJD11_RS20225 PF12161 HsdM N-terminal domain BJD11_RS20240 PF01420 Type I restriction modification DNA specificity domain BJD11_RS20245 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BJD11_RS20245 PF12008 Type I restriction and modification enzyme - subunit R C terminal BJD11_RS20245 PF18766 SWI2/SNF2 ATPase BJD11_RS20260 PF04715 Anthranilate synthase component I, N terminal region BJD11_RS20260 PF00425 chorismate binding enzyme BJD11_RS20265 PF00781 Diacylglycerol kinase catalytic domain BJD11_RS20270 PF00583 Acetyltransferase (GNAT) family BJD11_RS20275 PF00834 Ribulose-phosphate 3 epimerase family BJD11_RS20280 PF00226 DnaJ domain BJD11_RS20280 PF05099 Tellurite resistance protein TerB BJD11_RS20285 PF01259 SAICAR synthetase BJD11_RS20305 PF00182 Chitinase class I BJD11_RS20310 PF02868 Thermolysin metallopeptidase, alpha-helical domain BJD11_RS20310 PF07504 Fungalysin/Thermolysin Propeptide Motif BJD11_RS20310 PF01447 Thermolysin metallopeptidase, catalytic domain BJD11_RS20310 PF01483 Proprotein convertase P-domain BJD11_RS20325 PF00361 Proton-conducting membrane transporter BJD11_RS20325 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BJD11_RS20325 PF13244 Domain of unknown function (DUF4040) BJD11_RS20325 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BJD11_RS20330 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BJD11_RS20335 PF00361 Proton-conducting membrane transporter BJD11_RS20340 PF01899 Na+/H+ ion antiporter subunit BJD11_RS20345 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BJD11_RS20350 PF03334 Na+/H+ antiporter subunit BJD11_RS20370 PF04209 homogentisate 1,2-dioxygenase BJD11_RS20375 PF04480 Protein of unknown function (DUF559) BJD11_RS20380 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BJD11_RS20385 PF01047 MarR family BJD11_RS20395 PF00854 POT family BJD11_RS20400 PF03301 Tryptophan 2,3-dioxygenase BJD11_RS20410 PF00676 Dehydrogenase E1 component BJD11_RS20415 PF02780 Transketolase, C-terminal domain BJD11_RS20415 PF02779 Transketolase, pyrimidine binding domain BJD11_RS20425 PF02817 e3 binding domain BJD11_RS20425 PF00364 Biotin-requiring enzyme BJD11_RS20425 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BJD11_RS20430 PF03421 YopJ Serine/Threonine acetyltransferase BJD11_RS20435 PF00271 Helicase conserved C-terminal domain BJD11_RS20435 PF00270 DEAD/DEAH box helicase BJD11_RS20455 PF00873 AcrB/AcrD/AcrF family BJD11_RS20470 PF02321 Outer membrane efflux protein BJD11_RS20475 PF06903 VirK protein BJD11_RS20495 PF13460 NAD(P)H-binding BJD11_RS20500 PF00128 Alpha amylase, catalytic domain BJD11_RS20500 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BJD11_RS20510 PF00128 Alpha amylase, catalytic domain BJD11_RS20515 PF02446 4-alpha-glucanotransferase BJD11_RS20520 PF11941 Domain of unknown function (DUF3459) BJD11_RS20520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BJD11_RS20520 PF00128 Alpha amylase, catalytic domain BJD11_RS20525 PF00128 Alpha amylase, catalytic domain BJD11_RS20525 PF02806 Alpha amylase, C-terminal all-beta domain BJD11_RS20525 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BJD11_RS20530 PF00534 Glycosyl transferases group 1 BJD11_RS20530 PF08323 Starch synthase catalytic domain BJD11_RS20535 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS20540 PF05661 Protein of unknown function (DUF808) BJD11_RS20550 PF03109 ABC1 family BJD11_RS20560 PF00884 Sulfatase BJD11_RS20565 PF12795 Mechanosensitive ion channel porin domain BJD11_RS20565 PF12794 Mechanosensitive ion channel inner membrane domain 1 BJD11_RS20565 PF00924 Mechanosensitive ion channel BJD11_RS20585 PF01464 Transglycosylase SLT domain BJD11_RS20595 PF13683 Integrase core domain BJD11_RS20595 PF13276 HTH-like domain BJD11_RS20600 PF01527 Transposase BJD11_RS20620 PF03958 Bacterial type II/III secretion system short domain BJD11_RS20620 PF00263 Bacterial type II and III secretion system protein BJD11_RS20625 PF01311 Bacterial export proteins, family 1 BJD11_RS20635 PF18269 T3SS EscN ATPase C-terminal domain BJD11_RS20635 PF02874 ATP synthase alpha/beta family, beta-barrel domain BJD11_RS20635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BJD11_RS20650 PF01514 Secretory protein of YscJ/FliF family BJD11_RS20665 PF01312 FlhB HrpN YscU SpaS Family BJD11_RS20670 PF00771 FHIPEP family BJD11_RS20685 PF00813 FliP family BJD11_RS20690 PF01313 Bacterial export proteins, family 3 BJD11_RS20740 PF05819 NolX protein BJD11_RS20765 PF01040 UbiA prenyltransferase family BJD11_RS20775 PF06968 Biotin and Thiamin Synthesis associated domain BJD11_RS20775 PF04055 Radical SAM superfamily BJD11_RS20780 PF00155 Aminotransferase class I and II BJD11_RS20790 PF12697 Alpha/beta hydrolase family BJD11_RS20795 PF00106 short chain dehydrogenase BJD11_RS20800 PF13649 Methyltransferase domain BJD11_RS20820 PF00291 Pyridoxal-phosphate dependent enzyme BJD11_RS20830 PF01134 Glucose inhibited division protein A BJD11_RS20830 PF13932 GidA associated domain BJD11_RS20835 PF10677 Protein of unknown function (DUF2490) BJD11_RS20840 PF07859 alpha/beta hydrolase fold BJD11_RS20850 PF09339 IclR helix-turn-helix domain BJD11_RS20850 PF01614 Bacterial transcriptional regulator BJD11_RS20865 PF02627 Carboxymuconolactone decarboxylase family BJD11_RS20870 PF12146 Serine aminopeptidase, S33 BJD11_RS20875 PF10397 Adenylosuccinate lyase C-terminus BJD11_RS20875 PF00206 Lyase BJD11_RS20885 PF00775 Dioxygenase BJD11_RS20885 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BJD11_RS20890 PF02803 Thiolase, C-terminal domain BJD11_RS20890 PF00108 Thiolase, N-terminal domain BJD11_RS20895 PF01144 Coenzyme A transferase BJD11_RS20900 PF01144 Coenzyme A transferase BJD11_RS20905 PF00355 Rieske [2Fe-2S] domain BJD11_RS20910 PF00970 Oxidoreductase FAD-binding domain BJD11_RS20910 PF00111 2Fe-2S iron-sulfur cluster binding domain BJD11_RS20915 PF08220 DeoR-like helix-turn-helix domain BJD11_RS20915 PF00455 DeoR C terminal sensor domain BJD11_RS20920 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BJD11_RS20920 PF01266 FAD dependent oxidoreductase BJD11_RS20925 PF00230 Major intrinsic protein BJD11_RS20930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BJD11_RS20930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BJD11_RS20940 PF01494 FAD binding domain BJD11_RS20950 PF00171 Aldehyde dehydrogenase family BJD11_RS20970 PF11871 Domain of unknown function (DUF3391) BJD11_RS20970 PF01966 HD domain BJD11_RS20975 PF07690 Major Facilitator Superfamily BJD11_RS20985 PF00132 Bacterial transferase hexapeptide (six repeats) BJD11_RS21000 PF00920 Dehydratase family BJD11_RS21005 PF00589 Phage integrase family BJD11_RS21005 PF13495 Phage integrase, N-terminal SAM-like domain BJD11_RS21020 PF13276 HTH-like domain BJD11_RS21020 PF00665 Integrase core domain BJD11_RS21020 PF13333 Integrase core domain BJD11_RS21045 PF01638 HxlR-like helix-turn-helix BJD11_RS21050 PF05368 NmrA-like family BJD11_RS21060 PF03812 2-keto-3-deoxygluconate permease BJD11_RS21070 PF08267 Cobalamin-independent synthase, N-terminal domain BJD11_RS21070 PF01717 Cobalamin-independent synthase, Catalytic domain BJD11_RS21080 PF03358 NADPH-dependent FMN reductase BJD11_RS21085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS21085 PF03466 LysR substrate binding domain BJD11_RS21090 PF02677 Epoxyqueuosine reductase QueH BJD11_RS21105 PF02321 Outer membrane efflux protein BJD11_RS21110 PF00873 AcrB/AcrD/AcrF family BJD11_RS21115 PF00529 HlyD membrane-fusion protein of T1SS BJD11_RS21115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD11_RS21120 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS21120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS21120 PF00672 HAMP domain BJD11_RS21125 PF00072 Response regulator receiver domain BJD11_RS21125 PF00486 Transcriptional regulatory protein, C terminal BJD11_RS21130 PF00551 Formyl transferase BJD11_RS21140 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BJD11_RS21140 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BJD11_RS21145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BJD11_RS21150 PF02146 Sir2 family BJD11_RS21155 PF00561 alpha/beta hydrolase fold BJD11_RS21155 PF08386 TAP-like protein BJD11_RS21165 PF07690 Major Facilitator Superfamily BJD11_RS21170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS21170 PF03466 LysR substrate binding domain BJD11_RS21185 PF01026 TatD related DNase BJD11_RS21190 PF03466 LysR substrate binding domain BJD11_RS21190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS21195 PF00355 Rieske [2Fe-2S] domain BJD11_RS21200 PF00111 2Fe-2S iron-sulfur cluster binding domain BJD11_RS21210 PF00860 Permease family BJD11_RS21220 PF01156 Inosine-uridine preferring nucleoside hydrolase BJD11_RS21225 PF01425 Amidase BJD11_RS21245 PF00561 alpha/beta hydrolase fold BJD11_RS21250 PF03466 LysR substrate binding domain BJD11_RS21250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS21260 PF07687 Peptidase dimerisation domain BJD11_RS21260 PF01546 Peptidase family M20/M25/M40 BJD11_RS21265 PF00266 Aminotransferase class-V BJD11_RS21280 PF01014 Uricase BJD11_RS21280 PF09349 OHCU decarboxylase BJD11_RS21285 PF13454 FAD-NAD(P)-binding BJD11_RS21290 PF00576 HIUase/Transthyretin family BJD11_RS21295 PF07308 Protein of unknown function (DUF1456) BJD11_RS21305 PF08482 ATP-dependent helicase C-terminal BJD11_RS21305 PF04408 Helicase associated domain (HA2) BJD11_RS21305 PF00271 Helicase conserved C-terminal domain BJD11_RS21305 PF00270 DEAD/DEAH box helicase BJD11_RS21315 PF00849 RNA pseudouridylate synthase BJD11_RS21325 PF00248 Aldo/keto reductase family BJD11_RS21330 PF00107 Zinc-binding dehydrogenase BJD11_RS21330 PF16884 N-terminal domain of oxidoreductase BJD11_RS21350 PF02566 OsmC-like protein BJD11_RS21355 PF01047 MarR family BJD11_RS21360 PF03969 AFG1-like ATPase BJD11_RS21380 PF07683 Cobalamin synthesis protein cobW C-terminal domain BJD11_RS21380 PF02492 CobW/HypB/UreG, nucleotide-binding domain BJD11_RS21440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJD11_RS21440 PF02770 Acyl-CoA dehydrogenase, middle domain BJD11_RS21440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJD11_RS21445 PF01039 Carboxyl transferase domain BJD11_RS21450 PF00289 Biotin carboxylase, N-terminal domain BJD11_RS21450 PF00364 Biotin-requiring enzyme BJD11_RS21450 PF18140 Propionyl-coenzyme A carboxylase BT domain BJD11_RS21450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BJD11_RS21450 PF02785 Biotin carboxylase C-terminal domain BJD11_RS21455 PF00326 Prolyl oligopeptidase family BJD11_RS21475 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS21480 PF00463 Isocitrate lyase family BJD11_RS21485 PF01274 Malate synthase BJD11_RS21490 PF03466 LysR substrate binding domain BJD11_RS21490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS21495 PF00999 Sodium/hydrogen exchanger family BJD11_RS21500 PF12833 Helix-turn-helix domain BJD11_RS21520 PF12706 Beta-lactamase superfamily domain BJD11_RS21525 PF00106 short chain dehydrogenase BJD11_RS21530 PF01432 Peptidase family M3 BJD11_RS21535 PF01112 Asparaginase BJD11_RS21545 PF00472 RF-1 domain BJD11_RS21555 PF00849 RNA pseudouridylate synthase BJD11_RS21565 PF03109 ABC1 family BJD11_RS21580 PF07478 D-ala D-ala ligase C-terminus BJD11_RS21580 PF01820 D-ala D-ala ligase N-terminus BJD11_RS21590 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BJD11_RS21595 PF00501 AMP-binding enzyme BJD11_RS21600 PF03692 Putative zinc- or iron-chelating domain BJD11_RS21605 PF00561 alpha/beta hydrolase fold BJD11_RS21610 PF13784 Fic/DOC family N-terminal BJD11_RS21610 PF02661 Fic/DOC family BJD11_RS21615 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BJD11_RS21615 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BJD11_RS21630 PF00588 SpoU rRNA Methylase family BJD11_RS21635 PF07690 Major Facilitator Superfamily BJD11_RS21650 PF02954 Bacterial regulatory protein, Fis family BJD11_RS21650 PF00158 Sigma-54 interaction domain BJD11_RS21650 PF00072 Response regulator receiver domain BJD11_RS21655 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS21655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS21660 PF00205 Thiamine pyrophosphate enzyme, central domain BJD11_RS21660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BJD11_RS21660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BJD11_RS21690 PF02463 RecF/RecN/SMC N terminal domain BJD11_RS21705 PF01527 Transposase BJD11_RS21710 PF01527 Transposase BJD11_RS21715 PF13276 HTH-like domain BJD11_RS21715 PF13683 Integrase core domain BJD11_RS21800 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BJD11_RS21800 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BJD11_RS21805 PF02556 Preprotein translocase subunit SecB BJD11_RS21810 PF00581 Rhodanese-like domain BJD11_RS21845 PF00108 Thiolase, N-terminal domain BJD11_RS21845 PF02803 Thiolase, C-terminal domain BJD11_RS21855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BJD11_RS21860 PF00080 Copper/zinc superoxide dismutase (SODC) BJD11_RS21865 PF00080 Copper/zinc superoxide dismutase (SODC) BJD11_RS21870 PF02954 Bacterial regulatory protein, Fis family BJD11_RS21870 PF00072 Response regulator receiver domain BJD11_RS21870 PF00158 Sigma-54 interaction domain BJD11_RS21875 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS21875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS21875 PF00989 PAS fold BJD11_RS21880 PF00909 Ammonium Transporter Family BJD11_RS21885 PF00543 Nitrogen regulatory protein P-II BJD11_RS21890 PF03951 Glutamine synthetase, beta-Grasp domain BJD11_RS21890 PF00120 Glutamine synthetase, catalytic domain BJD11_RS21900 PF02673 Bacitracin resistance protein BacA BJD11_RS21910 PF08240 Alcohol dehydrogenase GroES-like domain BJD11_RS21910 PF00107 Zinc-binding dehydrogenase BJD11_RS21940 PF03061 Thioesterase superfamily BJD11_RS21945 PF13091 PLD-like domain BJD11_RS21960 PF10609 NUBPL iron-transfer P-loop NTPase BJD11_RS21960 PF01883 Iron-sulfur cluster assembly protein BJD11_RS21995 PF03781 Sulfatase-modifying factor enzyme 1 BJD11_RS21995 PF12867 DinB superfamily BJD11_RS22005 PF00528 Binding-protein-dependent transport system inner membrane component BJD11_RS22010 PF00005 ABC transporter BJD11_RS22025 PF00005 ABC transporter BJD11_RS22035 PF01546 Peptidase family M20/M25/M40 BJD11_RS22035 PF07687 Peptidase dimerisation domain BJD11_RS22045 PF07660 Secretin and TonB N terminus short domain BJD11_RS22045 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS22045 PF00593 TonB dependent receptor BJD11_RS22050 PF01037 Lrp/AsnC ligand binding domain BJD11_RS22055 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BJD11_RS22065 PF00657 GDSL-like Lipase/Acylhydrolase BJD11_RS22080 PF04962 KduI/IolB family BJD11_RS22085 PF00356 Bacterial regulatory proteins, lacI family BJD11_RS22090 PF04616 Glycosyl hydrolases family 43 BJD11_RS22090 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BJD11_RS22095 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BJD11_RS22105 PF03480 Bacterial extracellular solute-binding protein, family 7 BJD11_RS22115 PF13472 GDSL-like Lipase/Acylhydrolase family BJD11_RS22115 PF07859 alpha/beta hydrolase fold BJD11_RS22120 PF00135 Carboxylesterase family BJD11_RS22125 PF00248 Aldo/keto reductase family BJD11_RS22140 PF00128 Alpha amylase, catalytic domain BJD11_RS22140 PF02806 Alpha amylase, C-terminal all-beta domain BJD11_RS22140 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BJD11_RS22145 PF16657 Maltogenic Amylase, C-terminal domain BJD11_RS22145 PF00128 Alpha amylase, catalytic domain BJD11_RS22150 PF11896 Domain of unknown function (DUF3416) BJD11_RS22150 PF00128 Alpha amylase, catalytic domain BJD11_RS22210 PF00294 pfkB family carbohydrate kinase BJD11_RS22220 PF07055 Enoyl reductase FAD binding domain BJD11_RS22220 PF12241 Trans-2-enoyl-CoA reductase catalytic region BJD11_RS22220 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BJD11_RS22225 PF18500 CadC C-terminal domain 1 BJD11_RS22225 PF00486 Transcriptional regulatory protein, C terminal BJD11_RS22245 PF00072 Response regulator receiver domain BJD11_RS22245 PF00196 Bacterial regulatory proteins, luxR family BJD11_RS22250 PF07730 Histidine kinase BJD11_RS22255 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family BJD11_RS22270 PF01070 FMN-dependent dehydrogenase BJD11_RS22275 PF02735 Ku70/Ku80 beta-barrel domain BJD11_RS22295 PF00171 Aldehyde dehydrogenase family BJD11_RS22310 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS22310 PF00593 TonB dependent receptor BJD11_RS22315 PF00155 Aminotransferase class I and II BJD11_RS22335 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BJD11_RS22385 PF17863 AAA lid domain BJD11_RS22385 PF07726 ATPase family associated with various cellular activities (AAA) BJD11_RS22425 PF08946 Osmosensory transporter coiled coil BJD11_RS22425 PF00083 Sugar (and other) transporter BJD11_RS22435 PF00085 Thioredoxin BJD11_RS22450 PF13344 Haloacid dehalogenase-like hydrolase BJD11_RS22450 PF00293 NUDIX domain BJD11_RS22460 PF02868 Thermolysin metallopeptidase, alpha-helical domain BJD11_RS22460 PF16485 Protealysin propeptide BJD11_RS22460 PF01447 Thermolysin metallopeptidase, catalytic domain BJD11_RS22480 PF05532 CsbD-like BJD11_RS22505 PF13276 HTH-like domain BJD11_RS22505 PF13683 Integrase core domain BJD11_RS22510 PF01527 Transposase BJD11_RS22520 PF00069 Protein kinase domain BJD11_RS22520 PF03793 PASTA domain BJD11_RS22545 PF00106 short chain dehydrogenase BJD11_RS22565 PF03006 Haemolysin-III related BJD11_RS22570 PF09369 Domain of unknown function (DUF1998) BJD11_RS22570 PF00270 DEAD/DEAH box helicase BJD11_RS22570 PF00271 Helicase conserved C-terminal domain BJD11_RS22635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS22635 PF03466 LysR substrate binding domain BJD11_RS22665 PF01493 GXGXG motif BJD11_RS22665 PF00310 Glutamine amidotransferases class-II BJD11_RS22665 PF01645 Conserved region in glutamate synthase BJD11_RS22665 PF04898 Glutamate synthase central domain BJD11_RS22670 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BJD11_RS22670 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD11_RS22680 PF00107 Zinc-binding dehydrogenase BJD11_RS22680 PF08240 Alcohol dehydrogenase GroES-like domain BJD11_RS22690 PF00150 Cellulase (glycosyl hydrolase family 5) BJD11_RS22700 PF00150 Cellulase (glycosyl hydrolase family 5) BJD11_RS22705 PF00150 Cellulase (glycosyl hydrolase family 5) BJD11_RS22715 PF04389 Peptidase family M28 BJD11_RS22725 PF01551 Peptidase family M23 BJD11_RS22730 PF13180 PDZ domain BJD11_RS22730 PF03572 Peptidase family S41 BJD11_RS22735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BJD11_RS22735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BJD11_RS22750 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BJD11_RS22760 PF04055 Radical SAM superfamily BJD11_RS22775 PF13396 Phospholipase_D-nuclease N-terminal BJD11_RS22775 PF13091 PLD-like domain BJD11_RS22785 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BJD11_RS22795 PF02472 Biopolymer transport protein ExbD/TolR BJD11_RS22800 PF02472 Biopolymer transport protein ExbD/TolR BJD11_RS22805 PF02472 Biopolymer transport protein ExbD/TolR BJD11_RS22810 PF01618 MotA/TolQ/ExbB proton channel family BJD11_RS22815 PF03544 Gram-negative bacterial TonB protein C-terminal BJD11_RS22825 PF01435 Peptidase family M48 BJD11_RS22835 PF18053 DNA gyrase B subunit insert domain BJD11_RS22835 PF00986 DNA gyrase B subunit, carboxyl terminus BJD11_RS22835 PF00204 DNA gyrase B BJD11_RS22835 PF01751 Toprim domain BJD11_RS22835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS22840 PF02463 RecF/RecN/SMC N terminal domain BJD11_RS22845 PF00712 DNA polymerase III beta subunit, N-terminal domain BJD11_RS22845 PF02767 DNA polymerase III beta subunit, central domain BJD11_RS22845 PF02768 DNA polymerase III beta subunit, C-terminal domain BJD11_RS22850 PF00308 Bacterial dnaA protein BJD11_RS22850 PF08299 Bacterial dnaA protein helix-turn-helix BJD11_RS22850 PF11638 DnaA N-terminal domain BJD11_RS22860 PF00468 Ribosomal protein L34 BJD11_RS22865 PF00825 Ribonuclease P BJD11_RS22870 PF02096 60Kd inner membrane protein BJD11_RS22870 PF14849 YidC periplasmic domain BJD11_RS22875 PF01522 Polysaccharide deacetylase BJD11_RS22880 PF10396 GTP-binding protein TrmE N-terminus BJD11_RS22880 PF12631 MnmE helical domain BJD11_RS22880 PF01926 50S ribosome-binding GTPase BJD11_RS22885 PF01569 PAP2 superfamily BJD11_RS22900 PF03009 Glycerophosphoryl diester phosphodiesterase family BJD11_RS22905 PF01694 Rhomboid family BJD11_RS22915 PF03741 Integral membrane protein TerC family BJD11_RS22920 PF17785 PUA-like domain BJD11_RS22920 PF10672 S-adenosylmethionine-dependent methyltransferase BJD11_RS22935 PF07690 Major Facilitator Superfamily BJD11_RS22940 PF02595 Glycerate kinase family BJD11_RS22945 PF13556 PucR C-terminal helix-turn-helix domain BJD11_RS22945 PF05651 Putative sugar diacid recognition BJD11_RS22945 PF17853 GGDEF-like domain BJD11_RS22950 PF00990 Diguanylate cyclase, GGDEF domain BJD11_RS22955 PF10947 Protein of unknown function (DUF2628) BJD11_RS22960 PF07715 TonB-dependent Receptor Plug Domain BJD11_RS22960 PF00593 TonB dependent receptor BJD11_RS22965 PF17678 Glycosyl hydrolase family 92 N-terminal domain BJD11_RS22965 PF07971 Glycosyl hydrolase family 92 BJD11_RS22970 PF13520 Amino acid permease BJD11_RS22995 PF03466 LysR substrate binding domain BJD11_RS22995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS23000 PF00107 Zinc-binding dehydrogenase BJD11_RS23000 PF08240 Alcohol dehydrogenase GroES-like domain BJD11_RS23005 PF02646 RmuC family BJD11_RS23015 PF00255 Glutathione peroxidase BJD11_RS23025 PF04333 MlaA lipoprotein BJD11_RS23035 PF05494 MlaC protein BJD11_RS23040 PF02470 MlaD protein BJD11_RS23045 PF02405 Permease MlaE BJD11_RS23050 PF00005 ABC transporter BJD11_RS23085 PF17946 RecC C-terminal domain BJD11_RS23090 PF13361 UvrD-like helicase C-terminal domain BJD11_RS23090 PF12705 PD-(D/E)XK nuclease superfamily BJD11_RS23090 PF00580 UvrD/REP helicase N-terminal domain BJD11_RS23095 PF13538 UvrD-like helicase C-terminal domain BJD11_RS23105 PF01381 Helix-turn-helix BJD11_RS23155 PF00440 Bacterial regulatory proteins, tetR family BJD11_RS23190 PF01527 Transposase BJD11_RS23195 PF13276 HTH-like domain BJD11_RS23195 PF13683 Integrase core domain BJD11_RS23235 PF13091 PLD-like domain BJD11_RS23235 PF13396 Phospholipase_D-nuclease N-terminal BJD11_RS23255 PF00083 Sugar (and other) transporter BJD11_RS23260 PF04632 Fusaric acid resistance protein family BJD11_RS23265 PF02321 Outer membrane efflux protein BJD11_RS23270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD11_RS23270 PF00529 HlyD membrane-fusion protein of T1SS BJD11_RS23275 PF07869 Protein of unknown function (DUF1656) BJD11_RS23285 PF01227 GTP cyclohydrolase I BJD11_RS23305 PF01925 Sulfite exporter TauE/SafE BJD11_RS23310 PF02810 SEC-C motif BJD11_RS23320 PF01263 Aldose 1-epimerase BJD11_RS23325 PF07690 Major Facilitator Superfamily BJD11_RS23330 PF01126 Heme oxygenase BJD11_RS23335 PF01590 GAF domain BJD11_RS23335 PF08446 PAS fold BJD11_RS23335 PF13426 PAS domain BJD11_RS23335 PF00360 Phytochrome region BJD11_RS23340 PF03594 Benzoate membrane transport protein BJD11_RS23370 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BJD11_RS23370 PF06827 Zinc finger found in FPG and IleRS BJD11_RS23370 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BJD11_RS23380 PF04349 Periplasmic glucan biosynthesis protein, MdoG BJD11_RS23385 PF00360 Phytochrome region BJD11_RS23385 PF01590 GAF domain BJD11_RS23385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS23385 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS23385 PF08446 PAS fold BJD11_RS23390 PF00265 Thymidine kinase BJD11_RS23395 PF00580 UvrD/REP helicase N-terminal domain BJD11_RS23395 PF13361 UvrD-like helicase C-terminal domain BJD11_RS23410 PF04337 Protein of unknown function, DUF480 BJD11_RS23420 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BJD11_RS23425 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BJD11_RS23430 PF04820 Tryptophan halogenase BJD11_RS23445 PF00356 Bacterial regulatory proteins, lacI family BJD11_RS23455 PF01553 Acyltransferase BJD11_RS23465 PF00109 Beta-ketoacyl synthase, N-terminal domain BJD11_RS23465 PF02801 Beta-ketoacyl synthase, C-terminal domain BJD11_RS23465 PF00550 Phosphopantetheine attachment site BJD11_RS23465 PF00698 Acyl transferase domain BJD11_RS23465 PF00107 Zinc-binding dehydrogenase BJD11_RS23465 PF08240 Alcohol dehydrogenase GroES-like domain BJD11_RS23465 PF14765 Polyketide synthase dehydratase BJD11_RS23465 PF16197 Ketoacyl-synthetase C-terminal extension BJD11_RS23465 PF08659 KR domain BJD11_RS23495 PF04616 Glycosyl hydrolases family 43 BJD11_RS23515 PF00331 Glycosyl hydrolase family 10 BJD11_RS23515 PF00553 Cellulose binding domain BJD11_RS23515 PF03422 Carbohydrate binding module (family 6) BJD11_RS23525 PF00553 Cellulose binding domain BJD11_RS23525 PF03422 Carbohydrate binding module (family 6) BJD11_RS23525 PF00331 Glycosyl hydrolase family 10 BJD11_RS23530 PF02614 Glucuronate isomerase BJD11_RS23535 PF16355 Domain of unknown function (DUF4982) BJD11_RS23535 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BJD11_RS23535 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BJD11_RS23535 PF00703 Glycosyl hydrolases family 2 BJD11_RS23535 PF02837 Glycosyl hydrolases family 2, sugar binding domain BJD11_RS23540 PF00331 Glycosyl hydrolase family 10 BJD11_RS23545 PF08450 SMP-30/Gluconolactonase/LRE-like region BJD11_RS23560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BJD11_RS23560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BJD11_RS23570 PF00202 Aminotransferase class-III BJD11_RS23585 PF00171 Aldehyde dehydrogenase family BJD11_RS23620 PF08125 Mannitol dehydrogenase C-terminal domain BJD11_RS23620 PF01232 Mannitol dehydrogenase Rossmann domain BJD11_RS23625 PF14310 Fibronectin type III-like domain BJD11_RS23625 PF00933 Glycosyl hydrolase family 3 N terminal domain BJD11_RS23625 PF01915 Glycosyl hydrolase family 3 C-terminal domain BJD11_RS23625 PF07691 PA14 domain BJD11_RS23630 PF04616 Glycosyl hydrolases family 43 BJD11_RS23630 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BJD11_RS23635 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BJD11_RS23635 PF13378 Enolase C-terminal domain-like BJD11_RS23645 PF07477 Glycosyl hydrolase family 67 C-terminus BJD11_RS23645 PF07488 Glycosyl hydrolase family 67 middle domain BJD11_RS23645 PF03648 Glycosyl hydrolase family 67 N-terminus BJD11_RS23650 PF00356 Bacterial regulatory proteins, lacI family BJD11_RS23660 PF01171 PP-loop family BJD11_RS23665 PF04381 Putative exonuclease, RdgC BJD11_RS23680 PF12697 Alpha/beta hydrolase family BJD11_RS23685 PF00762 Ferrochelatase BJD11_RS23695 PF02416 mttA/Hcf106 family BJD11_RS23700 PF02416 mttA/Hcf106 family BJD11_RS23705 PF00902 Sec-independent protein translocase protein (TatC) BJD11_RS23715 PF00117 Glutamine amidotransferase class-I BJD11_RS23715 PF00958 GMP synthase C terminal domain BJD11_RS23730 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BJD11_RS23730 PF00437 Type II/IV secretion system protein BJD11_RS23735 PF02091 Glycyl-tRNA synthetase alpha subunit BJD11_RS23740 PF02092 Glycyl-tRNA synthetase beta subunit BJD11_RS23740 PF05746 DALR anticodon binding domain BJD11_RS23745 PF13181 Tetratricopeptide repeat BJD11_RS23760 PF01103 Surface antigen BJD11_RS23760 PF17243 POTRA domain TamA domain 1 BJD11_RS23765 PF04357 TamB, inner membrane protein subunit of TAM complex BJD11_RS23800 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BJD11_RS23800 PF06165 Glycosyltransferase family 36 BJD11_RS23815 PF00512 His Kinase A (phospho-acceptor) domain BJD11_RS23815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS23820 PF02659 Putative manganese efflux pump BJD11_RS23830 PF01614 Bacterial transcriptional regulator BJD11_RS23830 PF09339 IclR helix-turn-helix domain BJD11_RS23835 PF07690 Major Facilitator Superfamily BJD11_RS23840 PF05336 L-rhamnose mutarotase BJD11_RS23845 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BJD11_RS23845 PF13378 Enolase C-terminal domain-like BJD11_RS23855 PF01557 Fumarylacetoacetate (FAA) hydrolase family BJD11_RS23870 PF00248 Aldo/keto reductase family BJD11_RS23880 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BJD11_RS23880 PF04616 Glycosyl hydrolases family 43 BJD11_RS23910 PF00072 Response regulator receiver domain BJD11_RS23910 PF00196 Bacterial regulatory proteins, luxR family BJD11_RS23915 PF00501 AMP-binding enzyme BJD11_RS23915 PF16177 Acetyl-coenzyme A synthetase N-terminus BJD11_RS23915 PF13193 AMP-binding enzyme C-terminal domain BJD11_RS23925 PF04341 Protein of unknown function, DUF485 BJD11_RS23930 PF00474 Sodium:solute symporter family BJD11_RS23940 PF03372 Endonuclease/Exonuclease/phosphatase family BJD11_RS23950 PF04226 Transglycosylase associated protein BJD11_RS23955 PF01648 4'-phosphopantetheinyl transferase superfamily BJD11_RS23960 PF09423 PhoD-like phosphatase BJD11_RS23960 PF16655 PhoD-like phosphatase, N-terminal domain BJD11_RS23965 PF16655 PhoD-like phosphatase, N-terminal domain BJD11_RS23965 PF09423 PhoD-like phosphatase BJD11_RS23970 PF02527 rRNA small subunit methyltransferase G BJD11_RS23990 PF13533 Biotin-lipoyl like BJD11_RS23995 PF00873 AcrB/AcrD/AcrF family BJD11_RS24005 PF00830 Ribosomal L28 family BJD11_RS24010 PF00471 Ribosomal protein L33 BJD11_RS24015 PF04909 Amidohydrolase BJD11_RS24025 PF04303 PrpF protein BJD11_RS24030 PF03737 Aldolase/RraA BJD11_RS24035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS24035 PF03466 LysR substrate binding domain BJD11_RS24040 PF13091 PLD-like domain BJD11_RS24040 PF13396 Phospholipase_D-nuclease N-terminal BJD11_RS24055 PF13361 UvrD-like helicase C-terminal domain BJD11_RS24055 PF00580 UvrD/REP helicase N-terminal domain BJD11_RS24065 PF14602 Hexapeptide repeat of succinyl-transferase BJD11_RS24065 PF12464 Maltose acetyltransferase BJD11_RS24080 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 BJD11_RS24085 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath BJD11_RS24090 PF05638 Type VI secretion system effector, Hcp BJD11_RS24100 PF07024 ImpE protein BJD11_RS24105 PF04965 Gene 25-like lysozyme BJD11_RS24110 PF05947 Type VI secretion system, TssF BJD11_RS24120 PF00004 ATPase family associated with various cellular activities (AAA) BJD11_RS24120 PF07724 AAA domain (Cdc48 subfamily) BJD11_RS24120 PF17871 AAA lid domain BJD11_RS24120 PF10431 C-terminal, D2-small domain, of ClpB protein BJD11_RS24165 PF00328 Histidine phosphatase superfamily (branch 2) BJD11_RS24185 PF08281 Sigma-70, region 4 BJD11_RS24185 PF04542 Sigma-70 region 2 BJD11_RS24195 PF03793 PASTA domain BJD11_RS24195 PF00069 Protein kinase domain BJD11_RS24210 PF04717 Type VI secretion system, phage-baseplate injector BJD11_RS24225 PF03466 LysR substrate binding domain BJD11_RS24225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD11_RS24230 PF00248 Aldo/keto reductase family BJD11_RS24235 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE BJD11_RS24245 PF14331 ImcF-related N-terminal domain BJD11_RS24245 PF06744 Type VI secretion protein IcmF C-terminal BJD11_RS24245 PF06761 Intracellular multiplication and human macrophage-killing BJD11_RS24260 PF00069 Protein kinase domain BJD11_RS24280 PF06812 ImpA, N-terminal, type VI secretion system BJD11_RS24290 PF00476 DNA polymerase family A BJD11_RS24290 PF01612 3'-5' exonuclease BJD11_RS24290 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BJD11_RS24290 PF01367 5'-3' exonuclease, C-terminal SAM fold BJD11_RS24300 PF01218 Coproporphyrinogen III oxidase BJD11_RS24340 PF04820 Tryptophan halogenase BJD11_RS24345 PF00550 Phosphopantetheine attachment site BJD11_RS24355 PF01553 Acyltransferase BJD11_RS24360 PF07977 FabA-like domain BJD11_RS24420 PF00535 Glycosyl transferase family 2 BJD11_RS24430 PF02801 Beta-ketoacyl synthase, C-terminal domain BJD11_RS24430 PF00109 Beta-ketoacyl synthase, N-terminal domain BJD11_RS24435 PF05166 YcgL domain BJD11_RS24445 PF00723 Glycosyl hydrolases family 15 BJD11_RS24450 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BJD11_RS24450 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BJD11_RS24455 PF13683 Integrase core domain BJD11_RS24455 PF13276 HTH-like domain BJD11_RS24460 PF01527 Transposase BJD11_RS24475 PF02254 TrkA-N domain BJD11_RS24475 PF00999 Sodium/hydrogen exchanger family BJD11_RS24485 PF00194 Eukaryotic-type carbonic anhydrase BJD11_RS24490 PF00571 CBS domain BJD11_RS24490 PF03448 MgtE intracellular N domain BJD11_RS24490 PF01769 Divalent cation transporter BJD11_RS24495 PF13607 Succinyl-CoA ligase like flavodoxin domain BJD11_RS24495 PF13380 CoA binding domain BJD11_RS24495 PF00583 Acetyltransferase (GNAT) family BJD11_RS24510 PF03477 ATP cone domain BJD11_RS24510 PF02867 Ribonucleotide reductase, barrel domain BJD11_RS24510 PF00317 Ribonucleotide reductase, all-alpha domain BJD11_RS24515 PF00268 Ribonucleotide reductase, small chain BJD11_RS24520 PF00258 Flavodoxin BJD11_RS24545 PF02558 Ketopantoate reductase PanE/ApbA BJD11_RS24545 PF08546 Ketopantoate reductase PanE/ApbA C terminal BJD11_RS24550 PF01061 ABC-2 type transporter BJD11_RS24555 PF00005 ABC transporter BJD11_RS24560 PF00175 Oxidoreductase NAD-binding domain BJD11_RS24560 PF01383 CpcD/allophycocyanin linker domain BJD11_RS24565 PF01545 Cation efflux family BJD11_RS24570 PF02583 Metal-sensitive transcriptional repressor BJD11_RS24585 PF01381 Helix-turn-helix BJD11_RS24595 PF00005 ABC transporter BJD11_RS24610 PF04820 Tryptophan halogenase BJD11_RS24630 PF00043 Glutathione S-transferase, C-terminal domain BJD11_RS24630 PF02798 Glutathione S-transferase, N-terminal domain BJD11_RS24635 PF00326 Prolyl oligopeptidase family BJD11_RS24635 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BJD11_RS24660 PF00490 Delta-aminolevulinic acid dehydratase BJD11_RS24670 PF00175 Oxidoreductase NAD-binding domain BJD11_RS24670 PF00667 FAD binding domain BJD11_RS24670 PF00258 Flavodoxin BJD11_RS24680 PF08501 Shikimate dehydrogenase substrate binding domain BJD11_RS24680 PF01488 Shikimate / quinate 5-dehydrogenase BJD11_RS24680 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BJD11_RS24695 PF06733 DEAD_2 BJD11_RS24695 PF13307 Helicase C-terminal domain BJD11_RS24705 PF00199 Catalase BJD11_RS24705 PF06628 Catalase-related immune-responsive BJD11_RS24730 PF01207 Dihydrouridine synthase (Dus) BJD11_RS24740 PF00072 Response regulator receiver domain BJD11_RS24740 PF00486 Transcriptional regulatory protein, C terminal BJD11_RS24745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD11_RS24760 PF06167 Glucose-regulated metallo-peptidase M90 BJD11_RS24775 PF08279 HTH domain BJD11_RS24775 PF03099 Biotin/lipoate A/B protein ligase family BJD11_RS24775 PF02237 Biotin protein ligase C terminal domain BJD11_RS24780 PF03309 Type III pantothenate kinase BJD11_RS24795 PF02223 Thymidylate kinase BJD11_RS24825 PF00491 Arginase family BJD11_RS24840 PF05532 CsbD-like BJD11_RS24845 PF00579 tRNA synthetases class I (W and Y) BJD11_RS24850 PF00753 Metallo-beta-lactamase superfamily BJD11_RS24865 PF00892 EamA-like transporter family BJD11_RS24870 PF00892 EamA-like transporter family BJD11_RS24890 PF00005 ABC transporter BJD11_RS24895 PF13533 Biotin-lipoyl like BJD11_RS24900 PF07730 Histidine kinase BJD11_RS24905 PF00072 Response regulator receiver domain BJD11_RS24905 PF00196 Bacterial regulatory proteins, luxR family BJD11_RS24920 PF00199 Catalase BJD11_RS24925 PF04542 Sigma-70 region 2 BJD11_RS24925 PF08281 Sigma-70, region 4 BJD11_RS24935 PF00883 Cytosol aminopeptidase family, catalytic domain BJD11_RS24935 PF02789 Cytosol aminopeptidase family, N-terminal domain BJD11_RS24940 PF13419 Haloacid dehalogenase-like hydrolase BJD11_RS24945 PF01594 AI-2E family transporter BJD11_RS24965 PF00595 PDZ domain