locus-tag class description BER92_RS00005 IPR038454 DnaA, N-terminal domain superfamily BER92_RS00005 IPR020591 Chromosomal replication control, initiator DnaA-like BER92_RS00005 IPR001957 Chromosomal replication control, initiator DnaA BER92_RS00005 IPR003593 AAA+ ATPase domain BER92_RS00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal BER92_RS00005 IPR024633 DnaA N-terminal domain BER92_RS00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS00005 IPR010921 Trp repressor/replication initiator BER92_RS00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site BER92_RS00005 IPR013317 Chromosomal replication initiator protein DnaA BER92_RS00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal BER92_RS00010 IPR022637 DNA polymerase III, beta sliding clamp, central BER92_RS00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal BER92_RS00010 IPR001001 DNA polymerase III, beta sliding clamp BER92_RS00020 IPR018078 DNA-binding, RecF, conserved site BER92_RS00020 IPR042174 DNA-binding RecF, domain 2 BER92_RS00020 IPR003395 RecF/RecN/SMC, N-terminal BER92_RS00020 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS00020 IPR001238 DNA-binding, RecF BER92_RS00025 IPR002288 DNA gyrase B subunit, C-terminal BER92_RS00025 IPR011557 DNA gyrase, subunit B BER92_RS00025 IPR041423 DNA gyrase subunit B insert domain BER92_RS00025 IPR013760 DNA topoisomerase, type IIA-like domain superfamily BER92_RS00025 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS00025 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal BER92_RS00025 IPR001241 DNA topoisomerase, type IIA BER92_RS00025 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS00025 IPR034160 DNA gyrase subunit B, TOPRIM domain BER92_RS00025 IPR006171 TOPRIM domain BER92_RS00025 IPR018522 DNA topoisomerase, type IIA, conserved site BER92_RS00025 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 BER92_RS00025 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BER92_RS00025 IPR020568 Ribosomal protein S5 domain 2-type fold BER92_RS00035 IPR001915 Peptidase M48 BER92_RS00045 IPR006260 TonB/TolA, C-terminal BER92_RS00045 IPR037682 TonB, C-terminal BER92_RS00050 IPR002898 MotA/TolQ/ExbB proton channel BER92_RS00055 IPR003400 Biopolymer transport protein ExbD/TolR BER92_RS00060 IPR003400 Biopolymer transport protein ExbD/TolR BER92_RS00075 IPR013785 Aldolase-type TIM barrel BER92_RS00075 IPR036130 Pyridoxine 5'-phosphate synthase BER92_RS00075 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ BER92_RS00085 IPR030874 Cardiolipin synthase, Firmicutes-type BER92_RS00085 IPR022924 Cardiolipin synthase BER92_RS00085 IPR027379 Cardiolipin synthase N-terminal BER92_RS00085 IPR025202 Phospholipase D-like domain BER92_RS00085 IPR001736 Phospholipase D/Transphosphatidylase BER92_RS00100 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) BER92_RS00100 IPR042117 OMPP1/FadL/TodX superfamily BER92_RS00115 IPR002912 ACT domain BER92_RS00115 IPR029009 Allosteric substrate binding domain superfamily BER92_RS00115 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BER92_RS00115 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BER92_RS00115 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BER92_RS00115 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BER92_RS00115 IPR006236 D-3-phosphoglycerate dehydrogenase BER92_RS00115 IPR036291 NAD(P)-binding domain superfamily BER92_RS00120 IPR036034 PDZ superfamily BER92_RS00120 IPR004447 C-terminal-processing peptidase S41A BER92_RS00120 IPR001478 PDZ domain BER92_RS00120 IPR005151 Tail specific protease BER92_RS00120 IPR029045 ClpP/crotonase-like domain superfamily BER92_RS00125 IPR016047 Peptidase M23 BER92_RS00125 IPR011055 Duplicated hybrid motif BER92_RS00130 IPR007484 Peptidase M28 BER92_RS00145 IPR006094 FAD linked oxidase, N-terminal BER92_RS00145 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 BER92_RS00145 IPR004113 FAD-linked oxidase, C-terminal BER92_RS00145 IPR016164 FAD-linked oxidase-like, C-terminal BER92_RS00145 IPR016166 FAD-binding domain, PCMH-type BER92_RS00145 IPR036318 FAD-binding, type PCMH-like superfamily BER92_RS00145 IPR004490 Glycolate oxidase subunit GlcD BER92_RS00160 IPR036397 Ribonuclease H superfamily BER92_RS00160 IPR012337 Ribonuclease H-like superfamily BER92_RS00160 IPR001584 Integrase, catalytic core BER92_RS00160 IPR001598 Transposase, IS30, conserved site BER92_RS00160 IPR009057 Homeobox-like domain superfamily BER92_RS00165 IPR036291 NAD(P)-binding domain superfamily BER92_RS00165 IPR020904 Short-chain dehydrogenase/reductase, conserved site BER92_RS00165 IPR002347 Short-chain dehydrogenase/reductase SDR BER92_RS00175 IPR033854 Signal peptide peptidase A BER92_RS00175 IPR004635 Peptidase S49, SppA BER92_RS00175 IPR004634 Peptidase S49, protease IV BER92_RS00175 IPR029045 ClpP/crotonase-like domain superfamily BER92_RS00175 IPR002142 Peptidase S49 BER92_RS00180 IPR002528 Multi antimicrobial extrusion protein BER92_RS00195 IPR041236 Primosomal protein N, C-terminal domain BER92_RS00195 IPR041222 Primosomal protein N', 3' DNA-binding domain BER92_RS00195 IPR001650 Helicase, C-terminal BER92_RS00195 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS00195 IPR005259 Primosomal protein N' BER92_RS00195 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily BER92_RS00195 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain BER92_RS00195 IPR011545 DEAD/DEAH box helicase domain BER92_RS00195 IPR014001 Helicase superfamily 1/2, ATP-binding domain BER92_RS00210 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS00210 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria BER92_RS00210 IPR013324 RNA polymerase sigma factor, region 3/4-like BER92_RS00210 IPR014284 RNA polymerase sigma-70 like domain BER92_RS00210 IPR000943 RNA polymerase sigma-70 BER92_RS00210 IPR013325 RNA polymerase sigma factor, region 2 BER92_RS00210 IPR007627 RNA polymerase sigma-70 region 2 BER92_RS00210 IPR007630 RNA polymerase sigma-70 region 4 BER92_RS00215 IPR036895 Uracil-DNA glycosylase-like domain superfamily BER92_RS00215 IPR005122 Uracil-DNA glycosylase-like BER92_RS00215 IPR018085 Uracil-DNA glycosylase, active site BER92_RS00215 IPR002043 Uracil-DNA glycosylase family 1 BER92_RS00220 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type BER92_RS00220 IPR035909 Methylesterase CheB, C-terminal BER92_RS00220 IPR011006 CheY-like superfamily BER92_RS00220 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase BER92_RS00220 IPR001789 Signal transduction response regulator, receiver domain BER92_RS00225 IPR004513 Cell division protein FtsX BER92_RS00225 IPR040690 FtsX, extracellular domain BER92_RS00230 IPR017871 ABC transporter, conserved site BER92_RS00230 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS00230 IPR003439 ABC transporter-like BER92_RS00230 IPR003593 AAA+ ATPase domain BER92_RS00230 IPR005286 Cell division protein FtsE, ATP-binding BER92_RS00235 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS00235 IPR001650 Helicase, C-terminal BER92_RS00235 IPR014001 Helicase superfamily 1/2, ATP-binding domain BER92_RS00235 IPR011545 DEAD/DEAH box helicase domain BER92_RS00235 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BER92_RS00235 IPR023554 ATP-dependent RNA helicase RhlB type BER92_RS00235 IPR014014 RNA helicase, DEAD-box type, Q motif BER92_RS00235 IPR022077 ATP-dependent RNA helicase RhlB BER92_RS00240 IPR013766 Thioredoxin domain BER92_RS00240 IPR017937 Thioredoxin, conserved site BER92_RS00240 IPR036249 Thioredoxin-like superfamily BER92_RS00240 IPR005746 Thioredoxin BER92_RS00245 IPR003593 AAA+ ATPase domain BER92_RS00245 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BER92_RS00245 IPR011129 Cold shock domain BER92_RS00245 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS00245 IPR041703 Transcription termination factor Rho, ATP binding domain BER92_RS00245 IPR011112 Rho termination factor, N-terminal BER92_RS00245 IPR011113 Rho termination factor, RNA-binding domain BER92_RS00245 IPR012340 Nucleic acid-binding, OB-fold BER92_RS00245 IPR004665 Transcription termination factor Rho BER92_RS00250 IPR012337 Ribonuclease H-like superfamily BER92_RS00250 IPR024473 Transposase, IS4, N-terminal BER92_RS00250 IPR002559 Transposase, IS4-like BER92_RS00255 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric BER92_RS00275 IPR007055 BON domain BER92_RS00275 IPR014004 Transport-associated and nodulation domain, bacteria BER92_RS00275 IPR036779 LysM domain superfamily BER92_RS00275 IPR018392 LysM domain BER92_RS00280 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 BER92_RS00280 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF BER92_RS00280 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal BER92_RS00290 IPR006143 RND efflux pump, membrane fusion protein BER92_RS00290 IPR022824 Multidrug resistance protein MdtA BER92_RS00290 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BER92_RS00295 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BER92_RS00295 IPR001036 Acriflavin resistance protein BER92_RS00295 IPR022831 Multidrug resistance protein MdtB BER92_RS00300 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BER92_RS00300 IPR023931 Multidrug resistance protein MdtC BER92_RS00300 IPR001036 Acriflavin resistance protein BER92_RS00315 IPR009770 Domain of unknown function DUF1338 BER92_RS00330 IPR006311 Twin-arginine translocation pathway, signal sequence BER92_RS00330 IPR014756 Immunoglobulin E-set BER92_RS00330 IPR013783 Immunoglobulin-like fold BER92_RS00330 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal BER92_RS00330 IPR014438 Glucan biosynthesis protein MdoG/MdoD BER92_RS00330 IPR023724 Glucan biosynthesis, MdoD BER92_RS00330 IPR014718 Glycoside hydrolase-type carbohydrate-binding BER92_RS00330 IPR011013 Galactose mutarotase-like domain superfamily BER92_RS00335 IPR001267 Thymidine kinase BER92_RS00335 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS00340 IPR013986 DExx box DNA helicase domain superfamily BER92_RS00340 IPR000212 DNA helicase, UvrD/REP type BER92_RS00340 IPR005752 ATP-dependent DNA helicase Rep BER92_RS00340 IPR014016 UvrD-like helicase, ATP-binding domain BER92_RS00340 IPR014017 UvrD-like DNA helicase, C-terminal BER92_RS00340 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS00340 IPR034739 UvrD/AddA helicase, N-terminal BER92_RS00370 IPR007432 Protein of unknown function DUF480 BER92_RS00370 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS00370 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS00380 IPR036412 HAD-like superfamily BER92_RS00380 IPR006423 5-nucleotidase lipoprotein e(P4) BER92_RS00380 IPR023214 HAD superfamily BER92_RS00380 IPR005519 Acid phosphatase, class B-like BER92_RS00400 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase BER92_RS00400 IPR041728 GPAT/DHAPAT, acyltransferase domain BER92_RS00400 IPR002123 Phospholipid/glycerol acyltransferase BER92_RS00400 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB BER92_RS00405 IPR036736 ACP-like superfamily BER92_RS00405 IPR016039 Thiolase-like BER92_RS00405 IPR013154 Alcohol dehydrogenase, N-terminal BER92_RS00405 IPR036347 Erythronolide synthase, docking domain superfamily BER92_RS00405 IPR015357 Erythronolide synthase, docking BER92_RS00405 IPR011032 GroES-like superfamily BER92_RS00405 IPR018201 Beta-ketoacyl synthase, active site BER92_RS00405 IPR014031 Beta-ketoacyl synthase, C-terminal BER92_RS00405 IPR014030 Beta-ketoacyl synthase, N-terminal BER92_RS00405 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BER92_RS00405 IPR001227 Acyl transferase domain superfamily BER92_RS00405 IPR006162 Phosphopantetheine attachment site BER92_RS00405 IPR009081 Phosphopantetheine binding ACP domain BER92_RS00405 IPR015083 Polyketide synthase, docking domain BER92_RS00405 IPR032821 Ketoacyl-synthetase, C-terminal extension BER92_RS00405 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BER92_RS00405 IPR020843 Polyketide synthase, enoylreductase domain BER92_RS00405 IPR042104 Polyketide synthase, dehydratase domain superfamily BER92_RS00405 IPR036291 NAD(P)-binding domain superfamily BER92_RS00405 IPR020806 Polyketide synthase, phosphopantetheine-binding domain BER92_RS00405 IPR020807 Polyketide synthase, dehydratase domain BER92_RS00405 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BER92_RS00405 IPR014043 Acyl transferase BER92_RS00405 IPR013968 Polyketide synthase, ketoreductase domain BER92_RS00455 IPR025948 HTH-like domain BER92_RS00455 IPR001584 Integrase, catalytic core BER92_RS00455 IPR012337 Ribonuclease H-like superfamily BER92_RS00455 IPR036397 Ribonuclease H superfamily BER92_RS00460 IPR009057 Homeobox-like domain superfamily BER92_RS00460 IPR002514 Transposase IS3/IS911family BER92_RS00465 IPR020904 Short-chain dehydrogenase/reductase, conserved site BER92_RS00465 IPR036291 NAD(P)-binding domain superfamily BER92_RS00465 IPR002347 Short-chain dehydrogenase/reductase SDR BER92_RS00480 IPR025161 Putative transposase IS4/IS5 family BER92_RS00485 IPR010694 Uncharacterised protein family VirK BER92_RS00515 IPR014001 Helicase superfamily 1/2, ATP-binding domain BER92_RS00515 IPR001650 Helicase, C-terminal BER92_RS00515 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS00515 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BER92_RS00515 IPR011545 DEAD/DEAH box helicase domain BER92_RS00515 IPR014014 RNA helicase, DEAD-box type, Q motif BER92_RS00515 IPR028622 ATP-dependent RNA helicase RhlE BER92_RS00520 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BER92_RS00520 IPR000089 Biotin/lipoyl attachment BER92_RS00520 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily BER92_RS00520 IPR036625 E3-binding domain superfamily BER92_RS00520 IPR004167 Peripheral subunit-binding domain BER92_RS00520 IPR011053 Single hybrid motif BER92_RS00520 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain BER92_RS00530 IPR033248 Transketolase, C-terminal domain BER92_RS00530 IPR005475 Transketolase-like, pyrimidine-binding domain BER92_RS00530 IPR029061 Thiamin diphosphate-binding fold BER92_RS00530 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BER92_RS00535 IPR029061 Thiamin diphosphate-binding fold BER92_RS00535 IPR001017 Dehydrogenase, E1 component BER92_RS00535 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha BER92_RS00540 IPR004981 Tryptophan 2,3-dioxygenase BER92_RS00540 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like BER92_RS00545 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site BER92_RS00545 IPR005279 Dipeptide/tripeptide permease BER92_RS00545 IPR020846 Major facilitator superfamily domain BER92_RS00545 IPR036259 MFS transporter superfamily BER92_RS00545 IPR000109 Proton-dependent oligopeptide transporter family BER92_RS00560 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS00560 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS00560 IPR023187 Transcriptional regulator MarR-type, conserved site BER92_RS00560 IPR000835 MarR-type HTH domain BER92_RS00565 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BER92_RS00565 IPR037523 Vicinal oxygen chelate (VOC) domain BER92_RS00565 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BER92_RS00565 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal BER92_RS00565 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal BER92_RS00565 IPR005956 4-hydroxyphenylpyruvate dioxygenase BER92_RS00570 IPR011051 RmlC-like cupin domain superfamily BER92_RS00570 IPR005708 Homogentisate 1,2-dioxygenase BER92_RS00570 IPR014710 RmlC-like jelly roll fold BER92_RS00570 IPR022950 Homogentisate 1,2-dioxygenase, bacterial BER92_RS00595 IPR036291 NAD(P)-binding domain superfamily BER92_RS00595 IPR013332 Ketopantoate reductase, N-terminal domain BER92_RS00595 IPR013752 Ketopantoate reductase, C-terminal domain BER92_RS00595 IPR003710 Ketopantoate reductase ApbA/PanE BER92_RS00595 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BER92_RS00595 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BER92_RS00605 IPR000412 ABC-2 transporter BER92_RS00605 IPR013525 ABC-2 type transporter BER92_RS00610 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS00610 IPR017871 ABC transporter, conserved site BER92_RS00610 IPR003439 ABC transporter-like BER92_RS00610 IPR003593 AAA+ ATPase domain BER92_RS00615 IPR017938 Riboflavin synthase-like beta-barrel BER92_RS00615 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain BER92_RS00615 IPR012675 Beta-grasp domain superfamily BER92_RS00615 IPR017927 FAD-binding domain, ferredoxin reductase-type BER92_RS00615 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site BER92_RS00615 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BER92_RS00615 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BER92_RS00615 IPR036010 2Fe-2S ferredoxin-like superfamily BER92_RS00615 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BER92_RS00615 IPR001433 Oxidoreductase FAD/NAD(P)-binding BER92_RS00630 IPR003593 AAA+ ATPase domain BER92_RS00630 IPR003439 ABC transporter-like BER92_RS00630 IPR017871 ABC transporter, conserved site BER92_RS00630 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS00640 IPR037682 TonB, C-terminal BER92_RS00640 IPR006260 TonB/TolA, C-terminal BER92_RS00640 IPR003538 Gram-negative bacterial TonB protein BER92_RS00655 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BER92_RS00655 IPR010987 Glutathione S-transferase, C-terminal-like BER92_RS00655 IPR004045 Glutathione S-transferase, N-terminal BER92_RS00655 IPR004046 Glutathione S-transferase, C-terminal BER92_RS00655 IPR036249 Thioredoxin-like superfamily BER92_RS00660 IPR012337 Ribonuclease H-like superfamily BER92_RS00660 IPR001584 Integrase, catalytic core BER92_RS00660 IPR036397 Ribonuclease H superfamily BER92_RS00660 IPR025948 HTH-like domain BER92_RS00715 IPR006531 Gp5 N-terminal BER92_RS00715 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BER92_RS00715 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BER92_RS00715 IPR037026 Vgr protein, OB-fold domain superfamily BER92_RS00730 IPR037026 Vgr protein, OB-fold domain superfamily BER92_RS00730 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BER92_RS00730 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BER92_RS00730 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain BER92_RS00730 IPR006531 Gp5 N-terminal BER92_RS00730 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal BER92_RS00750 IPR006531 Gp5 N-terminal BER92_RS00750 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BER92_RS00750 IPR037026 Vgr protein, OB-fold domain superfamily BER92_RS00750 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BER92_RS00760 IPR001091 Restriction/modification DNA-methylase BER92_RS00760 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS00760 IPR002941 DNA methylase N-4/N-6 BER92_RS00760 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BER92_RS00770 IPR006430 Phage portal protein PBSX family BER92_RS00770 IPR030935 Phage portal protein PBSX family, Proteobacteria BER92_RS00900 IPR008490 Transposase InsH, N-terminal BER92_RS00905 IPR008490 Transposase InsH, N-terminal BER92_RS00925 IPR013325 RNA polymerase sigma factor, region 2 BER92_RS00925 IPR007631 RNA polymerase sigma factor 70, non-essential domain BER92_RS00925 IPR014284 RNA polymerase sigma-70 like domain BER92_RS00925 IPR000943 RNA polymerase sigma-70 BER92_RS00925 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS00925 IPR028630 RNA polymerase sigma factor RpoD BER92_RS00925 IPR012760 RNA polymerase sigma factor RpoD, C-terminal BER92_RS00925 IPR013324 RNA polymerase sigma factor, region 3/4-like BER92_RS00925 IPR042189 Sigma-70 factor, region 1.1 superfamily BER92_RS00925 IPR007127 RNA polymerase sigma factor 70, region 1.1 BER92_RS00925 IPR007630 RNA polymerase sigma-70 region 4 BER92_RS00925 IPR009042 RNA polymerase sigma-70 region 1.2 BER92_RS00925 IPR007624 RNA polymerase sigma-70 region 3 BER92_RS00925 IPR007627 RNA polymerase sigma-70 region 2 BER92_RS00930 IPR003732 D-aminoacyl-tRNA deacylase DTD BER92_RS00930 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily BER92_RS00940 IPR000182 GNAT domain BER92_RS00940 IPR016181 Acyl-CoA N-acyltransferase BER92_RS00945 IPR000926 GTP cyclohydrolase II, RibA BER92_RS00945 IPR032677 GTP cyclohydrolase II BER92_RS00945 IPR036144 RibA-like superfamily BER92_RS00965 IPR001173 Glycosyltransferase 2-like BER92_RS00965 IPR029044 Nucleotide-diphospho-sugar transferases BER92_RS00975 IPR038731 Glycosyltransferase RgtA/B/C/D-like BER92_RS00980 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type BER92_RS00980 IPR035926 NusB-like superfamily BER92_RS00980 IPR006027 NusB/RsmB/TIM44 BER92_RS00980 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS00980 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site BER92_RS00980 IPR023267 RNA (C5-cytosine) methyltransferase BER92_RS00980 IPR004573 rRNA small subunit methyltransferase B BER92_RS00985 IPR002376 Formyl transferase, N-terminal BER92_RS00985 IPR011034 Formyl transferase-like, C-terminal domain superfamily BER92_RS00985 IPR001555 Phosphoribosylglycinamide formyltransferase, active site BER92_RS00985 IPR037022 Formyl transferase, C-terminal domain superfamily BER92_RS00985 IPR005793 Formyl transferase, C-terminal BER92_RS00985 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain BER92_RS00985 IPR005794 Methionyl-tRNA formyltransferase BER92_RS00985 IPR036477 Formyl transferase, N-terminal domain superfamily BER92_RS00990 IPR023635 Peptide deformylase BER92_RS00990 IPR036821 Peptide deformylase superfamily BER92_RS00995 IPR018392 LysM domain BER92_RS00995 IPR036779 LysM domain superfamily BER92_RS01000 IPR003488 DNA recombination-mediator protein A BER92_RS01000 IPR041614 DprA, winged helix domain BER92_RS01000 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS01005 IPR007456 Smg BER92_RS01020 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BER92_RS01020 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BER92_RS01020 IPR023405 DNA topoisomerase, type IA, core domain BER92_RS01020 IPR023406 DNA topoisomerase, type IA, active site BER92_RS01020 IPR003601 DNA topoisomerase, type IA, domain 2 BER92_RS01020 IPR000380 DNA topoisomerase, type IA BER92_RS01020 IPR005733 DNA topoisomerase I, bacterial-type BER92_RS01020 IPR028612 DNA topoisomerase I, type IA BER92_RS01020 IPR025589 Topoisomerase C-terminal repeat BER92_RS01020 IPR006171 TOPRIM domain BER92_RS01020 IPR034149 DNA topoisomerase 1, TOPRIM domain BER92_RS01020 IPR013497 DNA topoisomerase, type IA, central BER92_RS01020 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BER92_RS01020 IPR003602 DNA topoisomerase, type IA, DNA-binding domain BER92_RS01025 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BER92_RS01025 IPR023535 Threonylcarbamoyl-AMP synthase BER92_RS01025 IPR006070 YrdC-like domain BER92_RS01050 IPR010917 TonB-dependent receptor, conserved site BER92_RS01050 IPR010916 TonB box, conserved site BER92_RS01050 IPR039426 Vitamin B12 transporter BtuB-like BER92_RS01050 IPR000531 TonB-dependent receptor-like, beta-barrel BER92_RS01050 IPR037066 TonB-dependent receptor, plug domain superfamily BER92_RS01050 IPR012910 TonB-dependent receptor, plug domain BER92_RS01050 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BER92_RS01055 IPR000184 Bacterial surface antigen (D15) BER92_RS01055 IPR035243 TamA, POTRA domain 1 BER92_RS01055 IPR039910 Surface antigen D15-like BER92_RS01060 IPR007452 Translocation and assembly module TamB BER92_RS01075 IPR015943 WD40/YVTN repeat-like-containing domain superfamily BER92_RS01075 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BER92_RS01075 IPR002372 Pyrrolo-quinoline quinone repeat BER92_RS01075 IPR025666 Pyrrolo-quinoline quinone-like domain BER92_RS01075 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BER92_RS01080 IPR006001 Carbohydrate kinase, thermoresistant glucokinase BER92_RS01080 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS01085 IPR036259 MFS transporter superfamily BER92_RS01085 IPR001927 Sodium:galactoside symporter BER92_RS01085 IPR018043 Sodium:galactoside symporter, conserved site BER92_RS01085 IPR039672 Lactose permease-like BER92_RS01095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS01095 IPR005467 Histidine kinase domain BER92_RS01095 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS01095 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS01095 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS01095 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS01095 IPR000700 PAS-associated, C-terminal BER92_RS01100 IPR022929 Putative manganese efflux pump MntP BER92_RS01100 IPR003810 Putative manganese efflux pump BER92_RS01105 IPR005471 Transcription regulator IclR, N-terminal BER92_RS01105 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS01105 IPR014757 Transcription regulator IclR, C-terminal BER92_RS01105 IPR029016 GAF-like domain superfamily BER92_RS01105 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS01110 IPR036259 MFS transporter superfamily BER92_RS01110 IPR011701 Major facilitator superfamily BER92_RS01110 IPR020846 Major facilitator superfamily domain BER92_RS01110 IPR005275 L-fucose permease FucP BER92_RS01115 IPR008000 Rhamnose/fucose mutarotase BER92_RS01115 IPR011008 Dimeric alpha-beta barrel BER92_RS01120 IPR029017 Enolase-like, N-terminal BER92_RS01120 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BER92_RS01120 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BER92_RS01120 IPR034610 L-fuconate dehydratase BER92_RS01120 IPR029065 Enolase C-terminal domain-like BER92_RS01120 IPR036849 Enolase-like, C-terminal domain superfamily BER92_RS01125 IPR011234 Fumarylacetoacetase-like, C-terminal BER92_RS01125 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily BER92_RS01130 IPR002347 Short-chain dehydrogenase/reductase SDR BER92_RS01130 IPR020904 Short-chain dehydrogenase/reductase, conserved site BER92_RS01130 IPR036291 NAD(P)-binding domain superfamily BER92_RS01140 IPR036812 NADP-dependent oxidoreductase domain superfamily BER92_RS01140 IPR023210 NADP-dependent oxidoreductase domain BER92_RS01145 IPR000792 Transcription regulator LuxR, C-terminal BER92_RS01145 IPR011006 CheY-like superfamily BER92_RS01145 IPR001789 Signal transduction response regulator, receiver domain BER92_RS01145 IPR016032 Signal transduction response regulator, C-terminal effector BER92_RS01150 IPR011904 Acetate-CoA ligase BER92_RS01150 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain BER92_RS01150 IPR042099 AMP-dependent synthetase-like superfamily BER92_RS01150 IPR025110 AMP-binding enzyme, C-terminal domain BER92_RS01150 IPR000873 AMP-dependent synthetase/ligase BER92_RS01150 IPR020845 AMP-binding, conserved site BER92_RS01160 IPR007436 Protein of unknown function DUF485 BER92_RS01165 IPR018212 Sodium/solute symporter, conserved site BER92_RS01165 IPR038377 Sodium/glucose symporter superfamily BER92_RS01165 IPR014083 Cation/acetate symporter ActP BER92_RS01165 IPR001734 Sodium/solute symporter BER92_RS01170 IPR037493 Exodeoxyribonuclease III-like BER92_RS01170 IPR005135 Endonuclease/exonuclease/phosphatase BER92_RS01170 IPR020847 AP endonuclease 1, binding site BER92_RS01170 IPR020848 AP endonuclease 1, conserved site BER92_RS01170 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BER92_RS01170 IPR004808 AP endonuclease 1 BER92_RS01180 IPR007341 Transglycosylase-associated protein BER92_RS01185 IPR008278 4'-phosphopantetheinyl transferase domain BER92_RS01185 IPR004568 Phosphopantetheine-protein transferase domain BER92_RS01185 IPR037143 4'-phosphopantetheinyl transferase domain superfamily BER92_RS01195 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS01195 IPR003682 rRNA small subunit methyltransferase G BER92_RS01200 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BER92_RS01200 IPR001036 Acriflavin resistance protein BER92_RS01200 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA BER92_RS01210 IPR034704 L28p-like BER92_RS01210 IPR026569 Ribosomal protein L28/L24 BER92_RS01210 IPR037147 Ribosomal protein L28/L24 superfamily BER92_RS01210 IPR001383 Ribosomal protein L28 BER92_RS01215 IPR001705 Ribosomal protein L33 BER92_RS01215 IPR018264 Ribosomal protein L33, conserved site BER92_RS01215 IPR011332 Zinc-binding ribosomal protein BER92_RS01215 IPR038584 Ribosomal protein L33 superfamily BER92_RS01220 IPR027379 Cardiolipin synthase N-terminal BER92_RS01220 IPR025202 Phospholipase D-like domain BER92_RS01220 IPR030874 Cardiolipin synthase, Firmicutes-type BER92_RS01220 IPR022924 Cardiolipin synthase BER92_RS01220 IPR001736 Phospholipase D/Transphosphatidylase BER92_RS01230 IPR013986 DExx box DNA helicase domain superfamily BER92_RS01230 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS01230 IPR014016 UvrD-like helicase, ATP-binding domain BER92_RS01230 IPR014017 UvrD-like DNA helicase, C-terminal BER92_RS01230 IPR000212 DNA helicase, UvrD/REP type BER92_RS01230 IPR034739 UvrD/AddA helicase, N-terminal BER92_RS01230 IPR005753 DNA helicase, ATP-dependent, UvrD type BER92_RS01245 IPR008490 Transposase InsH, N-terminal BER92_RS01260 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain BER92_RS01260 IPR013196 Helix-turn-helix, type 11 BER92_RS01260 IPR004409 Biotin operon repressor, helix-turn-helix domain BER92_RS01260 IPR008988 Transcriptional repressor, C-terminal BER92_RS01260 IPR004408 Biotin--acetyl-CoA-carboxylase ligase BER92_RS01260 IPR030855 Bifunctional ligase/repressor BirA BER92_RS01260 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS01260 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS01260 IPR003142 Biotin protein ligase, C-terminal BER92_RS01265 IPR004619 Type III pantothenate kinase BER92_RS01285 IPR036397 Ribonuclease H superfamily BER92_RS01285 IPR001584 Integrase, catalytic core BER92_RS01285 IPR012337 Ribonuclease H-like superfamily BER92_RS01285 IPR025948 HTH-like domain BER92_RS01290 IPR002514 Transposase IS3/IS911family BER92_RS01290 IPR009057 Homeobox-like domain superfamily BER92_RS01295 IPR002559 Transposase, IS4-like BER92_RS01295 IPR008490 Transposase InsH, N-terminal BER92_RS01310 IPR008490 Transposase InsH, N-terminal BER92_RS01325 IPR000620 EamA domain BER92_RS01325 IPR004626 RarD protein BER92_RS01335 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS01335 IPR036913 YegP-like superfamily BER92_RS01335 IPR002306 Tryptophan-tRNA ligase BER92_RS01335 IPR024109 Tryptophan-tRNA ligase, bacterial-type BER92_RS01335 IPR002305 Aminoacyl-tRNA synthetase, class Ic BER92_RS01350 IPR020855 Ureohydrolase, manganese-binding site BER92_RS01350 IPR023696 Ureohydrolase domain superfamily BER92_RS01350 IPR006035 Ureohydrolase BER92_RS01350 IPR014033 Arginase BER92_RS01370 IPR008490 Transposase InsH, N-terminal BER92_RS01375 IPR039430 Thymidylate kinase-like domain BER92_RS01375 IPR018094 Thymidylate kinase BER92_RS01375 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS01380 IPR008490 Transposase InsH, N-terminal BER92_RS01400 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal BER92_RS01400 IPR023042 Peptidase M17, leucine aminopeptidase BER92_RS01400 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal BER92_RS01400 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B BER92_RS01405 IPR010976 Beta-phosphoglucomutase hydrolase BER92_RS01405 IPR010972 Beta-phosphoglucomutase BER92_RS01405 IPR036412 HAD-like superfamily BER92_RS01405 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BER92_RS01405 IPR041492 Haloacid dehalogenase-like hydrolase BER92_RS01405 IPR023214 HAD superfamily BER92_RS01405 IPR006439 HAD hydrolase, subfamily IA BER92_RS01410 IPR002549 Transmembrane protein TqsA-like BER92_RS01430 IPR009003 Peptidase S1, PA clan BER92_RS01430 IPR001478 PDZ domain BER92_RS01430 IPR001940 Peptidase S1C BER92_RS01430 IPR011782 Peptidase S1C, Do BER92_RS01430 IPR036034 PDZ superfamily BER92_RS01450 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS01450 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS01450 IPR013727 Two-component sensor kinase, N-terminal BER92_RS01450 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS01450 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS01450 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS01450 IPR005467 Histidine kinase domain BER92_RS01455 IPR001789 Signal transduction response regulator, receiver domain BER92_RS01455 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS01455 IPR016032 Signal transduction response regulator, C-terminal effector BER92_RS01455 IPR001867 OmpR/PhoB-type DNA-binding domain BER92_RS01455 IPR011006 CheY-like superfamily BER92_RS01455 IPR039420 Transcriptional regulatory protein WalR-like BER92_RS01490 IPR013549 Domain of unknown function DUF1731 BER92_RS01490 IPR010099 Epimerase family protein SDR39U1 BER92_RS01490 IPR001509 NAD-dependent epimerase/dehydratase BER92_RS01490 IPR036291 NAD(P)-binding domain superfamily BER92_RS01530 IPR002559 Transposase, IS4-like BER92_RS01545 IPR001233 tRNA-splicing ligase, RtcB BER92_RS01545 IPR036025 tRNA-splicing ligase RtcB-like superfamily BER92_RS01550 IPR009057 Homeobox-like domain superfamily BER92_RS01550 IPR001647 DNA-binding HTH domain, TetR-type BER92_RS01550 IPR023764 Transcriptional repressor HTH, FabR BER92_RS01555 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BER92_RS01555 IPR036010 2Fe-2S ferredoxin-like superfamily BER92_RS01555 IPR017938 Riboflavin synthase-like beta-barrel BER92_RS01555 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BER92_RS01555 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BER92_RS01555 IPR017927 FAD-binding domain, ferredoxin reductase-type BER92_RS01555 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain BER92_RS01555 IPR012675 Beta-grasp domain superfamily BER92_RS01555 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site BER92_RS01555 IPR001433 Oxidoreductase FAD/NAD(P)-binding BER92_RS01560 IPR005804 Fatty acid desaturase domain BER92_RS01565 IPR001633 EAL domain BER92_RS01565 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain BER92_RS01565 IPR035919 EAL domain superfamily BER92_RS01580 IPR004482 Mg chelatase-related protein BER92_RS01580 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS01580 IPR003593 AAA+ ATPase domain BER92_RS01580 IPR025158 Mg chelatase-related protein, C-terminal domain BER92_RS01580 IPR000523 Magnesium chelatase ChlI domain BER92_RS01580 IPR001208 MCM domain BER92_RS01580 IPR020568 Ribosomal protein S5 domain 2-type fold BER92_RS01580 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BER92_RS01585 IPR007475 Ubiquinone biosynthesis accessory factor UbiK BER92_RS01590 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BER92_RS01590 IPR011322 Nitrogen regulatory PII-like, alpha/beta BER92_RS01590 IPR002332 Nitrogen regulatory protein P-II, urydylation site BER92_RS01590 IPR017918 Nitrogen regulatory protein PII, conserved site BER92_RS01590 IPR002187 Nitrogen regulatory protein PII BER92_RS01595 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal BER92_RS01595 IPR029018 Beta-hexosaminidase-like, domain 2 BER92_RS01595 IPR011496 Beta-N-acetylglucosaminidase BER92_RS01595 IPR036116 Fibronectin type III superfamily BER92_RS01595 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily BER92_RS01595 IPR003961 Fibronectin type III BER92_RS01595 IPR002102 Cellulosome anchoring protein, cohesin domain BER92_RS01595 IPR017853 Glycoside hydrolase superfamily BER92_RS01595 IPR008979 Galactose-binding-like domain superfamily BER92_RS01595 IPR013783 Immunoglobulin-like fold BER92_RS01595 IPR000421 Coagulation factor 5/8 C-terminal domain BER92_RS01615 IPR035246 Spermidine synthase, tetramerisation domain BER92_RS01615 IPR037163 Spermidine synthase, tetramerisation domain superfamily BER92_RS01615 IPR001045 Spermidine/spermine synthases BER92_RS01615 IPR030374 Polyamine biosynthesis domain BER92_RS01615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS01615 IPR030373 Polyamine biosynthesis domain, conserved site BER92_RS01620 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal BER92_RS01620 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BER92_RS01620 IPR002985 Arginine decarboxylase BER92_RS01620 IPR000183 Ornithine/DAP/Arg decarboxylase BER92_RS01620 IPR041128 Arginine decarboxylase, C-terminal helical BER92_RS01620 IPR040634 Arginine decarboxylase, helical bundle domain BER92_RS01620 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal BER92_RS01620 IPR029066 PLP-binding barrel BER92_RS01625 IPR008490 Transposase InsH, N-terminal BER92_RS01625 IPR002559 Transposase, IS4-like BER92_RS01630 IPR010657 ImpA, N-terminal BER92_RS01630 IPR017740 Type VI secretion system-associated, ImpA BER92_RS01640 IPR002421 5'-3' exonuclease, N-terminal BER92_RS01640 IPR001098 DNA-directed DNA polymerase, family A, palm domain BER92_RS01640 IPR020045 DNA polymerase I-like, H3TH domain BER92_RS01640 IPR018320 DNA polymerase 1 BER92_RS01640 IPR002298 DNA polymerase A BER92_RS01640 IPR008918 Helix-hairpin-helix motif, class 2 BER92_RS01640 IPR029060 PIN-like domain superfamily BER92_RS01640 IPR012337 Ribonuclease H-like superfamily BER92_RS01640 IPR036397 Ribonuclease H superfamily BER92_RS01640 IPR019760 DNA-directed DNA polymerase, family A, conserved site BER92_RS01640 IPR002562 3'-5' exonuclease domain BER92_RS01640 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BER92_RS01640 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal BER92_RS01645 IPR001260 Coproporphyrinogen III oxidase, aerobic BER92_RS01645 IPR018375 Coproporphyrinogen III oxidase, conserved site BER92_RS01645 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily BER92_RS01675 IPR035959 RutC-like superfamily BER92_RS01675 IPR031038 Chorismatase, FkbO/Hyg5 family BER92_RS01680 IPR006905 Flavin-dependent halogenase BER92_RS01680 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS01685 IPR036736 ACP-like superfamily BER92_RS01685 IPR003231 Acyl carrier protein (ACP) BER92_RS01685 IPR009081 Phosphopantetheine binding ACP domain BER92_RS01685 IPR006162 Phosphopantetheine attachment site BER92_RS01695 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase BER92_RS01695 IPR002123 Phospholipid/glycerol acyltransferase BER92_RS01700 IPR029069 HotDog domain superfamily BER92_RS01700 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ BER92_RS01700 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ BER92_RS01730 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative BER92_RS01730 IPR036291 NAD(P)-binding domain superfamily BER92_RS01730 IPR002347 Short-chain dehydrogenase/reductase SDR BER92_RS01740 IPR001173 Glycosyltransferase 2-like BER92_RS01740 IPR039528 DPM1-like BER92_RS01740 IPR029044 Nucleotide-diphospho-sugar transferases BER92_RS01750 IPR014031 Beta-ketoacyl synthase, C-terminal BER92_RS01750 IPR018201 Beta-ketoacyl synthase, active site BER92_RS01750 IPR016039 Thiolase-like BER92_RS01750 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BER92_RS01750 IPR014030 Beta-ketoacyl synthase, N-terminal BER92_RS01750 IPR000794 Beta-ketoacyl synthase BER92_RS01750 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 BER92_RS01755 IPR038068 YcgL-like superfamily BER92_RS01755 IPR027354 YcgL domain BER92_RS01770 IPR008928 Six-hairpin glycosidase superfamily BER92_RS01770 IPR012341 Six-hairpin glycosidase-like superfamily BER92_RS01770 IPR011613 GH15-like domain BER92_RS01775 IPR001282 Glucose-6-phosphate dehydrogenase BER92_RS01775 IPR019796 Glucose-6-phosphate dehydrogenase, active site BER92_RS01775 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal BER92_RS01775 IPR036291 NAD(P)-binding domain superfamily BER92_RS01775 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding BER92_RS01780 IPR006153 Cation/H+ exchanger BER92_RS01780 IPR004771 K+/H+ exchanger BER92_RS01780 IPR023941 Glutathione-regulated potassium-efflux system protein KefC BER92_RS01780 IPR006036 Potassium uptake protein TrkA BER92_RS01780 IPR038770 Sodium/solute symporter superfamily BER92_RS01780 IPR036291 NAD(P)-binding domain superfamily BER92_RS01780 IPR003148 Regulator of K+ conductance, N-terminal BER92_RS01785 IPR041891 Carbonic anhydrase, prokaryotic-like BER92_RS01785 IPR006311 Twin-arginine translocation pathway, signal sequence BER92_RS01785 IPR018338 Carbonic anhydrase, alpha-class, conserved site BER92_RS01785 IPR023561 Carbonic anhydrase, alpha-class BER92_RS01785 IPR001148 Alpha carbonic anhydrase domain BER92_RS01785 IPR036398 Alpha carbonic anhydrase domain superfamily BER92_RS01790 IPR038076 MgtE, N-terminal domain superfamily BER92_RS01790 IPR038048 Magnesium transporter MgtE, transmembrane domain BER92_RS01790 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily BER92_RS01790 IPR006668 Magnesium transporter, MgtE intracellular domain BER92_RS01790 IPR006669 Magnesium transporter MgtE BER92_RS01790 IPR006667 SLC41 divalent cation transporters, integral membrane domain BER92_RS01790 IPR000644 CBS domain BER92_RS01795 IPR036291 NAD(P)-binding domain superfamily BER92_RS01795 IPR000182 GNAT domain BER92_RS01795 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain BER92_RS01795 IPR016102 Succinyl-CoA synthetase-like BER92_RS01795 IPR003781 CoA-binding BER92_RS01795 IPR013815 ATP-grasp fold, subdomain 1 BER92_RS01795 IPR011761 ATP-grasp fold BER92_RS01795 IPR016181 Acyl-CoA N-acyltransferase BER92_RS01805 IPR005144 ATP-cone domain BER92_RS01805 IPR000788 Ribonucleotide reductase large subunit, C-terminal BER92_RS01805 IPR013346 Ribonucleotide reductase, class I , alpha subunit BER92_RS01805 IPR013509 Ribonucleotide reductase large subunit, N-terminal BER92_RS01805 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal BER92_RS01805 IPR039718 Ribonucleoside-diphosphate reductase large subunit BER92_RS01810 IPR000358 Ribonucleotide reductase small subunit family BER92_RS01810 IPR033909 Ribonucleotide reductase small subunit BER92_RS01810 IPR012348 Ribonucleotide reductase-like BER92_RS01810 IPR009078 Ferritin-like superfamily BER92_RS01830 IPR004254 AdipoR/Haemolysin-III-related BER92_RS01830 IPR005744 Hly-III BER92_RS01835 IPR001650 Helicase, C-terminal BER92_RS01835 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS01835 IPR014001 Helicase superfamily 1/2, ATP-binding domain BER92_RS01835 IPR011545 DEAD/DEAH box helicase domain BER92_RS01835 IPR018973 DEAD/DEAH-box helicase, putative BER92_RS01870 IPR001036 Acriflavin resistance protein BER92_RS01870 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BER92_RS01875 IPR023931 Multidrug resistance protein MdtC BER92_RS01875 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BER92_RS01875 IPR001036 Acriflavin resistance protein BER92_RS01895 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm BER92_RS01895 IPR011530 Ribosomal RNA adenine dimethylase BER92_RS01895 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site BER92_RS01895 IPR023165 rRNA adenine dimethylase-like BER92_RS01895 IPR022436 Rickettsia palindromic element RPE2 BER92_RS01895 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal BER92_RS01895 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS01935 IPR009057 Homeobox-like domain superfamily BER92_RS01935 IPR002514 Transposase IS3/IS911family BER92_RS01940 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative BER92_RS01940 IPR010758 Trans-2-enoyl-CoA reductase BER92_RS01940 IPR024906 Enoyl reductase FAD binding domain BER92_RS01960 IPR013785 Aldolase-type TIM barrel BER92_RS01960 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent BER92_RS01960 IPR037396 FMN hydroxy acid dehydrogenase domain BER92_RS01960 IPR020920 L-lactate dehydrogenase, bacterial BER92_RS01960 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site BER92_RS01960 IPR000262 FMN-dependent dehydrogenase BER92_RS01975 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS01975 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS01975 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site BER92_RS01975 IPR004839 Aminotransferase, class I/classII BER92_RS01975 IPR000796 Aspartate/other aminotransferase BER92_RS01975 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BER92_RS01980 IPR000146 Fructose-1,6-bisphosphatase class 1 BER92_RS01980 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal BER92_RS01980 IPR028343 Fructose-1,6-bisphosphatase BER92_RS02010 IPR020084 NUDIX hydrolase, conserved site BER92_RS02010 IPR000086 NUDIX hydrolase domain BER92_RS02010 IPR015376 Zinc ribbon, NADH pyrophosphatase BER92_RS02010 IPR015797 NUDIX hydrolase-like domain superfamily BER92_RS02010 IPR022925 NADH pyrophosphatase NudC BER92_RS02020 IPR032475 Protealysin, N-terminal propeptide BER92_RS02020 IPR013856 Peptidase M4 domain BER92_RS02020 IPR001570 Peptidase M4, C-terminal BER92_RS02020 IPR023612 Peptidase M4 BER92_RS02020 IPR027268 Peptidase M4/M1, CTD superfamily BER92_RS02035 IPR002559 Transposase, IS4-like BER92_RS02050 IPR002155 Thiolase BER92_RS02050 IPR012806 Acetyl-CoA C-acyltransferase FadI BER92_RS02050 IPR020613 Thiolase, conserved site BER92_RS02050 IPR020617 Thiolase, C-terminal BER92_RS02050 IPR020610 Thiolase, active site BER92_RS02050 IPR020615 Thiolase, acyl-enzyme intermediate active site BER92_RS02050 IPR016039 Thiolase-like BER92_RS02050 IPR020616 Thiolase, N-terminal BER92_RS02080 IPR001763 Rhodanese-like domain BER92_RS02080 IPR036873 Rhodanese-like domain superfamily BER92_RS02085 IPR003708 Bacterial protein export chaperone SecB BER92_RS02085 IPR035958 SecB-like superfamily BER92_RS02090 IPR036291 NAD(P)-binding domain superfamily BER92_RS02090 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BER92_RS02090 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BER92_RS02090 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal BER92_RS02090 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal BER92_RS02090 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent BER92_RS02100 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BER92_RS02100 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BER92_RS02100 IPR000399 TPP-binding enzyme, conserved site BER92_RS02100 IPR012000 Thiamine pyrophosphate enzyme, central domain BER92_RS02100 IPR029061 Thiamin diphosphate-binding fold BER92_RS02100 IPR029035 DHS-like NAD/FAD-binding domain superfamily BER92_RS02110 IPR029028 Alpha/beta knot methyltransferases BER92_RS02110 IPR001537 tRNA/rRNA methyltransferase, SpoU type BER92_RS02110 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase BER92_RS02110 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BER92_RS02120 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal BER92_RS02120 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 BER92_RS02120 IPR016039 Thiolase-like BER92_RS02120 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BER92_RS02130 IPR002514 Transposase IS3/IS911family BER92_RS02130 IPR009057 Homeobox-like domain superfamily BER92_RS02135 IPR036397 Ribonuclease H superfamily BER92_RS02135 IPR001584 Integrase, catalytic core BER92_RS02135 IPR012337 Ribonuclease H-like superfamily BER92_RS02135 IPR025948 HTH-like domain BER92_RS02150 IPR029064 50S ribosomal protein L30e-like BER92_RS02150 IPR001537 tRNA/rRNA methyltransferase, SpoU type BER92_RS02150 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BER92_RS02150 IPR004441 RNA methyltransferase TrmH family BER92_RS02150 IPR013123 RNA 2-O ribose methyltransferase, substrate binding BER92_RS02150 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB BER92_RS02150 IPR029028 Alpha/beta knot methyltransferases BER92_RS02160 IPR013785 Aldolase-type TIM barrel BER92_RS02160 IPR002480 DAHP synthetase, class II BER92_RS02180 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS02180 IPR035651 BipA, domain V BER92_RS02180 IPR006298 GTP-binding protein TypA BER92_RS02180 IPR035647 EF-G domain III/V-like BER92_RS02180 IPR000640 Elongation factor EFG, domain V-like BER92_RS02180 IPR004161 Translation elongation factor EFTu-like, domain 2 BER92_RS02180 IPR009000 Translation protein, beta-barrel domain superfamily BER92_RS02180 IPR031157 Tr-type G domain, conserved site BER92_RS02180 IPR000795 Transcription factor, GTP-binding domain BER92_RS02180 IPR005225 Small GTP-binding protein domain BER92_RS02180 IPR042116 GTP-binding protein TypA/BipA, C-terminal BER92_RS02185 IPR029000 Cyclophilin-like domain superfamily BER92_RS02185 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site BER92_RS02185 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain BER92_RS02190 IPR022383 Lactate/malate dehydrogenase, C-terminal BER92_RS02190 IPR001236 Lactate/malate dehydrogenase, N-terminal BER92_RS02190 IPR036291 NAD(P)-binding domain superfamily BER92_RS02190 IPR001557 L-lactate/malate dehydrogenase BER92_RS02190 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal BER92_RS02190 IPR010945 Malate dehydrogenase, type 2 BER92_RS02205 IPR004045 Glutathione S-transferase, N-terminal BER92_RS02205 IPR010987 Glutathione S-transferase, C-terminal-like BER92_RS02205 IPR004046 Glutathione S-transferase, C-terminal BER92_RS02205 IPR040079 Glutathione Transferase family BER92_RS02205 IPR036249 Thioredoxin-like superfamily BER92_RS02205 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BER92_RS02215 IPR002559 Transposase, IS4-like BER92_RS02215 IPR008490 Transposase InsH, N-terminal BER92_RS02225 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal BER92_RS02225 IPR023753 FAD/NAD(P)-binding domain BER92_RS02225 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS02225 IPR013785 Aldolase-type TIM barrel BER92_RS02230 IPR013154 Alcohol dehydrogenase, N-terminal BER92_RS02230 IPR036291 NAD(P)-binding domain superfamily BER92_RS02230 IPR013149 Alcohol dehydrogenase, C-terminal BER92_RS02230 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 BER92_RS02230 IPR011032 GroES-like superfamily BER92_RS02230 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site BER92_RS02230 IPR020843 Polyketide synthase, enoylreductase domain BER92_RS02235 IPR006665 OmpA-like domain BER92_RS02235 IPR036737 OmpA-like domain superfamily BER92_RS02235 IPR006664 Outer membrane protein, bacterial BER92_RS02235 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BER92_RS02235 IPR028974 TSP type-3 repeat BER92_RS02235 IPR006690 Outer membrane protein, OmpA-like, conserved site BER92_RS02235 IPR008722 Outer membrane porin F, N-terminal BER92_RS02245 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BER92_RS02245 IPR020103 Pseudouridine synthase, catalytic domain superfamily BER92_RS02245 IPR006145 Pseudouridine synthase, RsuA/RluA BER92_RS02245 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BER92_RS02245 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain BER92_RS02255 IPR004839 Aminotransferase, class I/classII BER92_RS02255 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site BER92_RS02255 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase BER92_RS02255 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS02255 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BER92_RS02255 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS02260 IPR005669 Thiosulphate/Sulfate-binding protein BER92_RS02260 IPR000957 Sulphate/thiosulphate-binding, conserved site BER92_RS02260 IPR034408 Sulphate/thiosulphate-binding site BER92_RS02265 IPR005667 Sulphate ABC transporter permease protein 2 BER92_RS02265 IPR035906 MetI-like superfamily BER92_RS02265 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BER92_RS02265 IPR011865 Sulphate ABC transporter, permease protein CysT BER92_RS02270 IPR005667 Sulphate ABC transporter permease protein 2 BER92_RS02270 IPR035906 MetI-like superfamily BER92_RS02270 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BER92_RS02270 IPR011866 Sulphate ABC transporter, permease protein CysW BER92_RS02275 IPR024765 TOBE-like domain BER92_RS02275 IPR041193 CysA, C-terminal regulatory domain BER92_RS02275 IPR017871 ABC transporter, conserved site BER92_RS02275 IPR003439 ABC transporter-like BER92_RS02275 IPR008995 Molybdate/tungstate binding, C-terminal BER92_RS02275 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS02275 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal BER92_RS02275 IPR003593 AAA+ ATPase domain BER92_RS02275 IPR005666 Sulphate transport system permease protein 1 BER92_RS02285 IPR004627 L-threonine 3-dehydrogenase BER92_RS02285 IPR011032 GroES-like superfamily BER92_RS02285 IPR013154 Alcohol dehydrogenase, N-terminal BER92_RS02285 IPR013149 Alcohol dehydrogenase, C-terminal BER92_RS02285 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BER92_RS02285 IPR020843 Polyketide synthase, enoylreductase domain BER92_RS02285 IPR036291 NAD(P)-binding domain superfamily BER92_RS02295 IPR006311 Twin-arginine translocation pathway, signal sequence BER92_RS02295 IPR017850 Alkaline-phosphatase-like, core domain superfamily BER92_RS02295 IPR017767 Bacterial phospholipase C, phosphocholine-specific BER92_RS02295 IPR007312 Phosphoesterase BER92_RS02295 IPR008475 Bacterial phospholipase C, C-terminal domain BER92_RS02300 IPR029033 Histidine phosphatase superfamily BER92_RS02300 IPR013078 Histidine phosphatase superfamily, clade-1 BER92_RS02320 IPR013783 Immunoglobulin-like fold BER92_RS02320 IPR017853 Glycoside hydrolase superfamily BER92_RS02320 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BER92_RS02320 IPR004193 Glycoside hydrolase, family 13, N-terminal BER92_RS02320 IPR014756 Immunoglobulin E-set BER92_RS02320 IPR011837 Glycogen debranching enzyme, GlgX type BER92_RS02320 IPR013780 Glycosyl hydrolase, all-beta BER92_RS02335 IPR041107 RimK, PreATP-grasp domain BER92_RS02335 IPR013651 ATP-grasp fold, RimK-type BER92_RS02335 IPR011761 ATP-grasp fold BER92_RS02335 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK BER92_RS02335 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX BER92_RS02335 IPR013815 ATP-grasp fold, subdomain 1 BER92_RS02345 IPR001867 OmpR/PhoB-type DNA-binding domain BER92_RS02345 IPR001789 Signal transduction response regulator, receiver domain BER92_RS02345 IPR039420 Transcriptional regulatory protein WalR-like BER92_RS02345 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS02345 IPR011006 CheY-like superfamily BER92_RS02350 IPR021766 Phosphate regulon sensor protein PhoR BER92_RS02350 IPR005467 Histidine kinase domain BER92_RS02350 IPR035965 PAS domain superfamily BER92_RS02350 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR BER92_RS02350 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS02350 IPR013767 PAS fold BER92_RS02350 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS02350 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS02350 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS02350 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS02350 IPR000014 PAS domain BER92_RS02370 IPR001783 Lumazine-binding protein BER92_RS02370 IPR026017 Lumazine-binding domain BER92_RS02370 IPR017938 Riboflavin synthase-like beta-barrel BER92_RS02370 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily BER92_RS02375 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BER92_RS02375 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB BER92_RS02375 IPR036144 RibA-like superfamily BER92_RS02375 IPR032677 GTP cyclohydrolase II BER92_RS02380 IPR036467 Lumazine/riboflavin synthase superfamily BER92_RS02380 IPR002180 Lumazine/riboflavin synthase BER92_RS02380 IPR034964 Lumazine synthase BER92_RS02385 IPR011605 NusB antitermination factor BER92_RS02385 IPR035926 NusB-like superfamily BER92_RS02385 IPR006027 NusB/RsmB/TIM44 BER92_RS02390 IPR010918 PurM-like, C-terminal domain BER92_RS02390 IPR036676 PurM-like, C-terminal domain superfamily BER92_RS02390 IPR016188 PurM-like, N-terminal domain BER92_RS02390 IPR036921 PurM-like, N-terminal domain superfamily BER92_RS02390 IPR006283 Thiamine-monophosphate kinase BER92_RS02400 IPR023298 P-type ATPase, transmembrane domain superfamily BER92_RS02400 IPR004623 Potassium-transporting ATPase A chain BER92_RS02425 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BER92_RS02425 IPR017809 Glutamate--cysteine ligase EgtA, Actinobacteria BER92_RS02425 IPR035434 Glutamate--cysteine ligase, bacteria and plant BER92_RS02425 IPR006336 Glutamate--cysteine ligase, GCS2 BER92_RS02430 IPR030393 EngB-type guanine nucleotide-binding (G) domain BER92_RS02430 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS02430 IPR006073 GTP binding domain BER92_RS02430 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC BER92_RS02435 IPR024167 Cytochrome c4-like BER92_RS02435 IPR036909 Cytochrome c-like domain superfamily BER92_RS02435 IPR009056 Cytochrome c-like domain BER92_RS02445 IPR001853 DSBA-like thioredoxin domain BER92_RS02445 IPR013766 Thioredoxin domain BER92_RS02445 IPR017937 Thioredoxin, conserved site BER92_RS02445 IPR036249 Thioredoxin-like superfamily BER92_RS02445 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL BER92_RS02455 IPR020843 Polyketide synthase, enoylreductase domain BER92_RS02455 IPR036291 NAD(P)-binding domain superfamily BER92_RS02455 IPR011032 GroES-like superfamily BER92_RS02455 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BER92_RS02455 IPR013149 Alcohol dehydrogenase, C-terminal BER92_RS02455 IPR013154 Alcohol dehydrogenase, N-terminal BER92_RS02465 IPR002559 Transposase, IS4-like BER92_RS02490 IPR011673 Protein of unknown function DUF1615 BER92_RS02510 IPR004840 Amino acid permease, conserved site BER92_RS02510 IPR004841 Amino acid permease/ SLC12A domain BER92_RS02520 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB BER92_RS02520 IPR004488 Magnesium/cobalt transport protein CorA BER92_RS02540 IPR018232 Glycoside hydrolase, family 37, conserved site BER92_RS02540 IPR023720 Trehalase, periplasmic BER92_RS02540 IPR001661 Glycoside hydrolase, family 37 BER92_RS02540 IPR012341 Six-hairpin glycosidase-like superfamily BER92_RS02540 IPR008928 Six-hairpin glycosidase superfamily BER92_RS02565 IPR000160 GGDEF domain BER92_RS02565 IPR035919 EAL domain superfamily BER92_RS02565 IPR001633 EAL domain BER92_RS02565 IPR029787 Nucleotide cyclase BER92_RS02565 IPR005330 MHYT domain BER92_RS02580 IPR017853 Glycoside hydrolase superfamily BER92_RS02580 IPR018087 Glycoside hydrolase, family 5, conserved site BER92_RS02580 IPR001547 Glycoside hydrolase, family 5 BER92_RS02580 IPR012291 CBM2, carbohydrate-binding domain superfamily BER92_RS02580 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily BER92_RS02580 IPR001919 Carbohydrate-binding type-2 domain BER92_RS02585 IPR011547 SLC26A/SulP transporter domain BER92_RS02585 IPR036513 STAS domain superfamily BER92_RS02585 IPR002645 STAS domain BER92_RS02585 IPR001902 SLC26A/SulP transporter BER92_RS02585 IPR018045 Sulphate anion transporter, conserved site BER92_RS02595 IPR023725 Glucan biosynthesis glucosyltransferase H BER92_RS02595 IPR029044 Nucleotide-diphospho-sugar transferases BER92_RS02595 IPR001173 Glycosyltransferase 2-like BER92_RS02610 IPR011006 CheY-like superfamily BER92_RS02610 IPR001789 Signal transduction response regulator, receiver domain BER92_RS02610 IPR007492 LytTR DNA-binding domain BER92_RS02615 IPR000860 Porphobilinogen deaminase BER92_RS02615 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site BER92_RS02615 IPR022417 Porphobilinogen deaminase, N-terminal BER92_RS02615 IPR022418 Porphobilinogen deaminase, C-terminal BER92_RS02615 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily BER92_RS02640 IPR029058 Alpha/Beta hydrolase fold BER92_RS02640 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BER92_RS02640 IPR002470 Peptidase S9A, prolyl oligopeptidase BER92_RS02640 IPR023302 Peptidase S9A, N-terminal domain BER92_RS02655 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS02655 IPR004839 Aminotransferase, class I/classII BER92_RS02655 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site BER92_RS02655 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS02660 IPR002470 Peptidase S9A, prolyl oligopeptidase BER92_RS02660 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BER92_RS02660 IPR023302 Peptidase S9A, N-terminal domain BER92_RS02660 IPR029058 Alpha/Beta hydrolase fold BER92_RS02670 IPR001653 Diaminopimelate epimerase, DapF BER92_RS02670 IPR018510 Diaminopimelate epimerase, active site BER92_RS02680 IPR023009 Tyrosine recombinase XerC/XerD BER92_RS02680 IPR011931 Tyrosine recombinase XerC BER92_RS02680 IPR004107 Integrase, SAM-like, N-terminal BER92_RS02680 IPR010998 Integrase/recombinase, N-terminal BER92_RS02680 IPR002104 Integrase, catalytic domain BER92_RS02680 IPR013762 Integrase-like, catalytic domain superfamily BER92_RS02680 IPR011010 DNA breaking-rejoining enzyme, catalytic core BER92_RS02685 IPR023333 Proteasome B-type subunit BER92_RS02685 IPR029055 Nucleophile aminohydrolases, N-terminal BER92_RS02685 IPR001353 Proteasome, subunit alpha/beta BER92_RS02685 IPR022281 ATP-dependent protease, HslV subunit BER92_RS02690 IPR003959 ATPase, AAA-type, core BER92_RS02690 IPR019489 Clp ATPase, C-terminal BER92_RS02690 IPR004491 Heat shock protein HslU BER92_RS02690 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS02690 IPR003593 AAA+ ATPase domain BER92_RS02715 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS02715 IPR004033 UbiE/COQ5 methyltransferase BER92_RS02715 IPR023576 UbiE/COQ5 methyltransferase, conserved site BER92_RS02720 IPR029787 Nucleotide cyclase BER92_RS02720 IPR001633 EAL domain BER92_RS02720 IPR000160 GGDEF domain BER92_RS02720 IPR035965 PAS domain superfamily BER92_RS02720 IPR005330 MHYT domain BER92_RS02720 IPR035919 EAL domain superfamily BER92_RS02725 IPR034016 Aminopeptidase N-type BER92_RS02725 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase BER92_RS02725 IPR014782 Peptidase M1, membrane alanine aminopeptidase BER92_RS02725 IPR042097 Aminopeptidase N-like , N-terminal BER92_RS02740 IPR011611 Carbohydrate kinase PfkB BER92_RS02740 IPR029056 Ribokinase-like BER92_RS02740 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BER92_RS02745 IPR004753 Cell shape determining protein MreB BER92_RS02750 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 BER92_RS02750 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 BER92_RS02750 IPR007221 Rod shape-determining protein MreC BER92_RS02760 IPR017790 Penicillin-binding protein 2 BER92_RS02760 IPR001460 Penicillin-binding protein, transpeptidase BER92_RS02760 IPR036138 Penicillin-binding protein, dimerisation domain superfamily BER92_RS02760 IPR012338 Beta-lactamase/transpeptidase-like BER92_RS02760 IPR005311 Penicillin-binding protein, dimerisation domain BER92_RS02765 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB BER92_RS02765 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA BER92_RS02765 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site BER92_RS02770 IPR012334 Pectin lyase fold BER92_RS02770 IPR006626 Parallel beta-helix repeat BER92_RS02770 IPR000743 Glycoside hydrolase, family 28 BER92_RS02770 IPR011050 Pectin lyase fold/virulence factor BER92_RS02775 IPR023346 Lysozyme-like domain superfamily BER92_RS02775 IPR031304 Transglycosylase SLT domain 2 BER92_RS02775 IPR011757 Lytic transglycosylase MltB BER92_RS02780 IPR034718 Endolytic peptidoglycan transglycosylase RlpA BER92_RS02780 IPR009009 RlpA-like protein, double-psi beta-barrel domain BER92_RS02780 IPR036908 RlpA-like domain superfamily BER92_RS02780 IPR012997 Rare lipoprotein A BER92_RS02780 IPR036680 Sporulation-like domain superfamily BER92_RS02780 IPR007730 Sporulation-like domain BER92_RS02785 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal BER92_RS02785 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A BER92_RS02785 IPR012338 Beta-lactamase/transpeptidase-like BER92_RS02785 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal BER92_RS02785 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily BER92_RS02785 IPR015956 Penicillin-binding protein, C-terminal domain superfamily BER92_RS02795 IPR027471 YbeD-like domain superfamily BER92_RS02795 IPR007454 Uncharacterised protein family UPF0250 BER92_RS02800 IPR020605 Octanoyltransferase, conserved site BER92_RS02800 IPR000544 Octanoyltransferase BER92_RS02800 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain BER92_RS02805 IPR003698 Lipoyl synthase BER92_RS02805 IPR031691 Lipoyl synthase, N-terminal BER92_RS02805 IPR013785 Aldolase-type TIM barrel BER92_RS02805 IPR007197 Radical SAM BER92_RS02805 IPR006638 Elp3/MiaB/NifB BER92_RS02830 IPR001478 PDZ domain BER92_RS02830 IPR029045 ClpP/crotonase-like domain superfamily BER92_RS02830 IPR005151 Tail specific protease BER92_RS02830 IPR020992 Tail specific protease, C-terminal BER92_RS02830 IPR004447 C-terminal-processing peptidase S41A BER92_RS02830 IPR036034 PDZ superfamily BER92_RS02830 IPR040573 Tail specific protease, N-terminal domain BER92_RS02870 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type BER92_RS02870 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BER92_RS02870 IPR006114 6-phosphogluconate dehydrogenase, C-terminal BER92_RS02870 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding BER92_RS02870 IPR036291 NAD(P)-binding domain superfamily BER92_RS02870 IPR006183 6-phosphogluconate dehydrogenase BER92_RS02870 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BER92_RS02875 IPR000683 Oxidoreductase, N-terminal BER92_RS02875 IPR036291 NAD(P)-binding domain superfamily BER92_RS02875 IPR004104 Oxidoreductase, C-terminal BER92_RS02880 IPR014004 Transport-associated and nodulation domain, bacteria BER92_RS02880 IPR007055 BON domain BER92_RS02885 IPR029016 GAF-like domain superfamily BER92_RS02885 IPR003018 GAF domain BER92_RS02885 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS02885 IPR005467 Histidine kinase domain BER92_RS02885 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS02885 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS02885 IPR035965 PAS domain superfamily BER92_RS02885 IPR013654 PAS fold-2 BER92_RS02885 IPR016132 Phytochrome chromophore attachment domain BER92_RS02885 IPR001294 Phytochrome BER92_RS02885 IPR013515 Phytochrome, central region BER92_RS02885 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS02890 IPR011006 CheY-like superfamily BER92_RS02890 IPR001789 Signal transduction response regulator, receiver domain BER92_RS02895 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS02895 IPR005467 Histidine kinase domain BER92_RS02895 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS02895 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS02895 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS02895 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS02895 IPR029151 Periplasmic sensor-like domain superfamily BER92_RS02900 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily BER92_RS02900 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK BER92_RS02905 IPR002347 Short-chain dehydrogenase/reductase SDR BER92_RS02905 IPR020904 Short-chain dehydrogenase/reductase, conserved site BER92_RS02905 IPR036291 NAD(P)-binding domain superfamily BER92_RS02930 IPR012337 Ribonuclease H-like superfamily BER92_RS02930 IPR036397 Ribonuclease H superfamily BER92_RS02930 IPR001584 Integrase, catalytic core BER92_RS02930 IPR025948 HTH-like domain BER92_RS02935 IPR002514 Transposase IS3/IS911family BER92_RS02935 IPR009057 Homeobox-like domain superfamily BER92_RS02945 IPR002514 Transposase IS3/IS911family BER92_RS02945 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS02945 IPR009057 Homeobox-like domain superfamily BER92_RS02950 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS02950 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS02950 IPR000524 Transcription regulator HTH, GntR BER92_RS02950 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BER92_RS02950 IPR011663 UbiC transcription regulator-associated BER92_RS02955 IPR005964 Bacterial glucose/galactose transporter BER92_RS02955 IPR011701 Major facilitator superfamily BER92_RS02955 IPR036259 MFS transporter superfamily BER92_RS02960 IPR000843 LacI-type HTH domain BER92_RS02960 IPR028082 Periplasmic binding protein-like I BER92_RS02960 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BER92_RS02960 IPR023588 Transcription regulator HTH, PurR BER92_RS02965 IPR035490 GlmS/FrlB, SIS domain 2 BER92_RS02965 IPR035466 GlmS/AgaS, SIS domain 1 BER92_RS02965 IPR017932 Glutamine amidotransferase type 2 domain BER92_RS02965 IPR029055 Nucleophile aminohydrolases, N-terminal BER92_RS02965 IPR001347 Sugar isomerase (SIS) BER92_RS02965 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising BER92_RS02970 IPR011059 Metal-dependent hydrolase, composite domain superfamily BER92_RS02970 IPR003764 N-acetylglucosamine-6-phosphate deacetylase BER92_RS02970 IPR032466 Metal-dependent hydrolase BER92_RS02970 IPR006680 Amidohydrolase-related BER92_RS02980 IPR038390 Metal-sensitive transcriptional repressor superfamily BER92_RS02980 IPR003735 Metal-sensitive transcriptional repressor BER92_RS02985 IPR036291 NAD(P)-binding domain superfamily BER92_RS02985 IPR020843 Polyketide synthase, enoylreductase domain BER92_RS02985 IPR013154 Alcohol dehydrogenase, N-terminal BER92_RS02985 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BER92_RS02985 IPR011032 GroES-like superfamily BER92_RS02985 IPR013149 Alcohol dehydrogenase, C-terminal BER92_RS02985 IPR014183 Alcohol dehydrogenase class III BER92_RS02990 IPR011057 Mss4-like superfamily BER92_RS02990 IPR014185 Glutathione-dependent formaldehyde-activating enzyme BER92_RS02990 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V BER92_RS02995 IPR029058 Alpha/Beta hydrolase fold BER92_RS02995 IPR000801 Putative esterase BER92_RS02995 IPR014186 S-formylglutathione hydrolase BER92_RS03020 IPR011059 Metal-dependent hydrolase, composite domain superfamily BER92_RS03020 IPR006680 Amidohydrolase-related BER92_RS03020 IPR020043 Deacetylase Atu3266-like BER92_RS03020 IPR032466 Metal-dependent hydrolase BER92_RS03030 IPR008490 Transposase InsH, N-terminal BER92_RS03060 IPR008490 Transposase InsH, N-terminal BER92_RS03065 IPR002514 Transposase IS3/IS911family BER92_RS03065 IPR009057 Homeobox-like domain superfamily BER92_RS03075 IPR002109 Glutaredoxin BER92_RS03075 IPR033658 Glutaredoxin, PICOT-like BER92_RS03075 IPR014434 Monothiol glutaredoxin BER92_RS03075 IPR004480 Monothiol glutaredoxin-related BER92_RS03075 IPR036249 Thioredoxin-like superfamily BER92_RS03080 IPR026402 Chitooligosaccharide deacetylase NodB BER92_RS03080 IPR002509 NodB homology domain BER92_RS03080 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel BER92_RS03095 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BER92_RS03095 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS03095 IPR004839 Aminotransferase, class I/classII BER92_RS03095 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS03100 IPR010132 ATPase, type I secretion system, HlyB BER92_RS03100 IPR039421 Type I protein exporter BER92_RS03100 IPR039395 Peptidase C39-like A BER92_RS03100 IPR005074 Peptidase C39, bacteriocin processing BER92_RS03100 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS03100 IPR017871 ABC transporter, conserved site BER92_RS03100 IPR003439 ABC transporter-like BER92_RS03100 IPR036640 ABC transporter type 1, transmembrane domain superfamily BER92_RS03100 IPR003593 AAA+ ATPase domain BER92_RS03100 IPR011527 ABC transporter type 1, transmembrane domain BER92_RS03105 IPR006144 Secretion protein HlyD, conserved site BER92_RS03105 IPR010129 Type I secretion membrane fusion protein, HlyD family BER92_RS03120 IPR037017 Anthrax toxin, edema factor, central domain superfamily BER92_RS03120 IPR005165 Anthrax toxin, edema factor, central BER92_RS03120 IPR035099 Anthrax toxin, edema factor, C-terminal BER92_RS03120 IPR010566 Haemolysin-type calcium binding-related BER92_RS03120 IPR018511 Hemolysin-type calcium-binding conserved site BER92_RS03120 IPR001343 RTX calcium-binding nonapeptide repeat BER92_RS03120 IPR018504 RTX N-terminal BER92_RS03120 IPR003995 RTX toxin determinant A BER92_RS03120 IPR011049 Serralysin-like metalloprotease, C-terminal BER92_RS03130 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain BER92_RS03130 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS03130 IPR004881 Ribosome biogenesis GTPase RsgA BER92_RS03130 IPR010914 RsgA GTPase domain BER92_RS03140 IPR013780 Glycosyl hydrolase, all-beta BER92_RS03140 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BER92_RS03140 IPR017853 Glycoside hydrolase superfamily BER92_RS03150 IPR036259 MFS transporter superfamily BER92_RS03150 IPR039672 Lactose permease-like BER92_RS03150 IPR018043 Sodium:galactoside symporter, conserved site BER92_RS03155 IPR028082 Periplasmic binding protein-like I BER92_RS03155 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BER92_RS03155 IPR023588 Transcription regulator HTH, PurR BER92_RS03155 IPR000843 LacI-type HTH domain BER92_RS03160 IPR036291 NAD(P)-binding domain superfamily BER92_RS03160 IPR011283 Acetoacetyl-CoA reductase BER92_RS03160 IPR002347 Short-chain dehydrogenase/reductase SDR BER92_RS03160 IPR020904 Short-chain dehydrogenase/reductase, conserved site BER92_RS03165 IPR004680 Citrate transporter-like domain BER92_RS03165 IPR014738 Citrate transporter BER92_RS03175 IPR001867 OmpR/PhoB-type DNA-binding domain BER92_RS03175 IPR016032 Signal transduction response regulator, C-terminal effector BER92_RS03175 IPR001789 Signal transduction response regulator, receiver domain BER92_RS03175 IPR039420 Transcriptional regulatory protein WalR-like BER92_RS03175 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS03175 IPR011006 CheY-like superfamily BER92_RS03180 IPR005467 Histidine kinase domain BER92_RS03180 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS03180 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS03180 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS03180 IPR013727 Two-component sensor kinase, N-terminal BER92_RS03180 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS03180 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS03190 IPR000792 Transcription regulator LuxR, C-terminal BER92_RS03190 IPR016032 Signal transduction response regulator, C-terminal effector BER92_RS03190 IPR001789 Signal transduction response regulator, receiver domain BER92_RS03190 IPR011006 CheY-like superfamily BER92_RS03200 IPR009057 Homeobox-like domain superfamily BER92_RS03200 IPR002514 Transposase IS3/IS911family BER92_RS03215 IPR009057 Homeobox-like domain superfamily BER92_RS03215 IPR002514 Transposase IS3/IS911family BER92_RS03225 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS03225 IPR005467 Histidine kinase domain BER92_RS03225 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS03225 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS03225 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS03225 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS03225 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) BER92_RS03225 IPR033479 Double Cache domain 1 BER92_RS03225 IPR029151 Periplasmic sensor-like domain superfamily BER92_RS03235 IPR018107 Sodium:dicarboxylate symporter, conserved site BER92_RS03235 IPR001991 Sodium:dicarboxylate symporter BER92_RS03235 IPR023954 C4-dicarboxylate transport protein BER92_RS03235 IPR036458 Sodium:dicarboxylate symporter superfamily BER92_RS03240 IPR012302 Malic enzyme, NAD-binding BER92_RS03240 IPR015884 Malic enzyme, conserved site BER92_RS03240 IPR012301 Malic enzyme, N-terminal domain BER92_RS03240 IPR037062 Malic enzyme, N-terminal domain superfamily BER92_RS03240 IPR012188 NAD(P)-dependent malic enzyme BER92_RS03240 IPR036291 NAD(P)-binding domain superfamily BER92_RS03240 IPR002505 Phosphate acetyl/butaryl transferase BER92_RS03240 IPR042113 Phosphate acetyltransferase, domain 1 BER92_RS03240 IPR042112 Phosphate acetyltransferase, domain 2 BER92_RS03265 IPR004960 Bacterial lipid A biosynthesis acyltransferase BER92_RS03265 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP BER92_RS03265 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase BER92_RS03270 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal BER92_RS03270 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily BER92_RS03270 IPR039901 3-deoxy-D-manno-octulosonic acid transferase BER92_RS03275 IPR003423 Outer membrane efflux protein BER92_RS03275 IPR010130 Type I secretion outer membrane protein, TolC BER92_RS03280 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase BER92_RS03280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS03290 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS03290 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS03290 IPR000847 Transcription regulator HTH, LysR BER92_RS03295 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 BER92_RS03295 IPR033941 3-Isopropylmalate dehydratase, catalytic domain BER92_RS03295 IPR004430 3-isopropylmalate dehydratase, large subunit BER92_RS03295 IPR036008 Aconitase, iron-sulfur domain BER92_RS03295 IPR018136 Aconitase family, 4Fe-4S cluster binding site BER92_RS03295 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain BER92_RS03300 IPR033940 3-isopropylmalate dehydratase, swivel domain BER92_RS03300 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain BER92_RS03300 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BER92_RS03300 IPR004431 3-isopropylmalate dehydratase, small subunit BER92_RS03305 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site BER92_RS03305 IPR004429 Isopropylmalate dehydrogenase BER92_RS03305 IPR024084 Isopropylmalate dehydrogenase-like domain BER92_RS03310 IPR037066 TonB-dependent receptor, plug domain superfamily BER92_RS03310 IPR012910 TonB-dependent receptor, plug domain BER92_RS03310 IPR039426 Vitamin B12 transporter BtuB-like BER92_RS03310 IPR010916 TonB box, conserved site BER92_RS03310 IPR010917 TonB-dependent receptor, conserved site BER92_RS03310 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BER92_RS03310 IPR000531 TonB-dependent receptor-like, beta-barrel BER92_RS03315 IPR008490 Transposase InsH, N-terminal BER92_RS03320 IPR000891 Pyruvate carboxyltransferase BER92_RS03320 IPR005671 2-isopropylmalate synthase, bacterial-type BER92_RS03320 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily BER92_RS03320 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain BER92_RS03320 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site BER92_RS03320 IPR013785 Aldolase-type TIM barrel BER92_RS03325 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BER92_RS03325 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BER92_RS03325 IPR001926 Pyridoxal-phosphate dependent enzyme BER92_RS03325 IPR005789 Threonine dehydratase, catabolic BER92_RS03335 IPR039368 Acetolactate synthase large subunit, TPP binding domain BER92_RS03335 IPR012846 Acetolactate synthase, large subunit, biosynthetic BER92_RS03335 IPR012000 Thiamine pyrophosphate enzyme, central domain BER92_RS03335 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain BER92_RS03335 IPR029035 DHS-like NAD/FAD-binding domain superfamily BER92_RS03335 IPR029061 Thiamin diphosphate-binding fold BER92_RS03335 IPR000399 TPP-binding enzyme, conserved site BER92_RS03335 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding BER92_RS03340 IPR014359 Ketol-acid reductoisomerase, prokaryotic BER92_RS03340 IPR013116 Ketol-acid reductoisomerase, N-terminal BER92_RS03340 IPR000506 Ketol-acid reductoisomerase, C-terminal BER92_RS03340 IPR013023 Ketol-acid reductoisomerase BER92_RS03340 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BER92_RS03340 IPR036291 NAD(P)-binding domain superfamily BER92_RS03360 IPR037509 Phosphomethylpyrimidine synthase BER92_RS03360 IPR038521 ThiC/Bza superfamily BER92_RS03360 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B BER92_RS03360 IPR025747 ThiC-associated domain BER92_RS03370 IPR008490 Transposase InsH, N-terminal BER92_RS03370 IPR002559 Transposase, IS4-like BER92_RS03375 IPR029062 Class I glutamine amidotransferase-like BER92_RS03375 IPR009057 Homeobox-like domain superfamily BER92_RS03375 IPR018062 HTH domain AraC-type, conserved site BER92_RS03375 IPR020449 Transcription regulator HTH, AraC- type BER92_RS03375 IPR018060 DNA binding HTH domain, AraC-type BER92_RS03380 IPR000531 TonB-dependent receptor-like, beta-barrel BER92_RS03380 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BER92_RS03380 IPR010917 TonB-dependent receptor, conserved site BER92_RS03380 IPR037066 TonB-dependent receptor, plug domain superfamily BER92_RS03380 IPR012910 TonB-dependent receptor, plug domain BER92_RS03380 IPR039426 Vitamin B12 transporter BtuB-like BER92_RS03380 IPR010101 TonB-dependent vitamin B12 transporter BtuB BER92_RS03380 IPR010916 TonB box, conserved site BER92_RS03390 IPR036649 Inorganic pyrophosphatase superfamily BER92_RS03390 IPR008162 Inorganic pyrophosphatase BER92_RS03400 IPR004131 Pyrophosphate-energised proton pump BER92_RS03420 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 BER92_RS03420 IPR022953 ATP-dependent 6-phosphofructokinase BER92_RS03420 IPR000023 Phosphofructokinase domain BER92_RS03420 IPR035966 Phosphofructokinase superfamily BER92_RS03425 IPR033690 Adenylate kinase, conserved site BER92_RS03425 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS03425 IPR000850 Adenylate kinase/UMP-CMP kinase BER92_RS03430 IPR013221 Mur ligase, central BER92_RS03430 IPR036615 Mur ligase, C-terminal domain superfamily BER92_RS03430 IPR036565 Mur-like, catalytic domain superfamily BER92_RS03430 IPR005757 Murein peptide ligase BER92_RS03430 IPR004101 Mur ligase, C-terminal BER92_RS03430 IPR000713 Mur ligase, N-terminal catalytic domain BER92_RS03445 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BER92_RS03445 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BER92_RS03455 IPR020904 Short-chain dehydrogenase/reductase, conserved site BER92_RS03455 IPR002347 Short-chain dehydrogenase/reductase SDR BER92_RS03455 IPR036291 NAD(P)-binding domain superfamily BER92_RS03465 IPR008490 Transposase InsH, N-terminal BER92_RS03465 IPR002559 Transposase, IS4-like BER92_RS03475 IPR004636 Acetylornithine/Succinylornithine transaminase family BER92_RS03475 IPR005814 Aminotransferase class-III BER92_RS03475 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS03475 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS03475 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BER92_RS03480 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase BER92_RS03480 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BER92_RS03480 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS03480 IPR005814 Aminotransferase class-III BER92_RS03480 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS03485 IPR036206 Thiamin phosphate synthase superfamily BER92_RS03485 IPR022998 Thiamine phosphate synthase/TenI BER92_RS03485 IPR034291 Thiamine phosphate synthase BER92_RS03485 IPR013785 Aldolase-type TIM barrel BER92_RS03490 IPR018527 Rubredoxin, iron-binding site BER92_RS03490 IPR024935 Rubredoxin domain BER92_RS03490 IPR024934 Rubredoxin-like domain BER92_RS03490 IPR024922 Rubredoxin BER92_RS03495 IPR019734 Tetratricopeptide repeat BER92_RS03495 IPR032698 Protein SirB1, N-terminal BER92_RS03495 IPR013026 Tetratricopeptide repeat-containing domain BER92_RS03495 IPR011990 Tetratricopeptide-like helical domain superfamily BER92_RS03505 IPR004788 Ribose 5-phosphate isomerase, type A BER92_RS03505 IPR037171 NagB/RpiA transferase-like BER92_RS03505 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup BER92_RS03515 IPR002698 5-formyltetrahydrofolate cyclo-ligase BER92_RS03515 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily BER92_RS03515 IPR037171 NagB/RpiA transferase-like BER92_RS03525 IPR036192 Cell division protein ZapA-like superfamily BER92_RS03525 IPR007838 Cell division protein ZapA-like BER92_RS03535 IPR036255 YgfB-like superfamily BER92_RS03535 IPR011978 Uncharacterised protein family UPF0149 BER92_RS03540 IPR007865 Aminopeptidase P, N-terminal BER92_RS03540 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BER92_RS03540 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BER92_RS03540 IPR001714 Peptidase M24, methionine aminopeptidase BER92_RS03540 IPR000994 Peptidase M24 BER92_RS03540 IPR036005 Creatinase/aminopeptidase-like BER92_RS03545 IPR022846 Xaa-Pro dipeptidase BER92_RS03545 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BER92_RS03545 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BER92_RS03545 IPR000994 Peptidase M24 BER92_RS03545 IPR036005 Creatinase/aminopeptidase-like BER92_RS03560 IPR023404 Radical SAM, alpha/beta horseshoe BER92_RS03560 IPR034505 Anaerobic coproporphyrinogen-III oxidase BER92_RS03560 IPR006638 Elp3/MiaB/NifB BER92_RS03560 IPR007197 Radical SAM BER92_RS03560 IPR004559 Heme chaperone HemW-like BER92_RS03560 IPR010723 HemN, C-terminal BER92_RS03565 IPR020922 dITP/XTP pyrophosphatase BER92_RS03565 IPR002637 Ham1-like protein BER92_RS03565 IPR029001 Inosine triphosphate pyrophosphatase-like BER92_RS03570 IPR018336 Ribonuclease PH, conserved site BER92_RS03570 IPR002381 Ribonuclease PH, bacterial-type BER92_RS03570 IPR020568 Ribosomal protein S5 domain 2-type fold BER92_RS03570 IPR001247 Exoribonuclease, phosphorolytic domain 1 BER92_RS03570 IPR027408 PNPase/RNase PH domain superfamily BER92_RS03570 IPR036345 Exoribonuclease, PH domain 2 superfamily BER92_RS03570 IPR015847 Exoribonuclease, phosphorolytic domain 2 BER92_RS03575 IPR013527 YicC-like, N-terminal BER92_RS03575 IPR013551 Domain of unknown function DUF1732 BER92_RS03575 IPR005229 Conserved hypothetical protein CHP00255 BER92_RS03580 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS03580 IPR008144 Guanylate kinase-like domain BER92_RS03580 IPR020590 Guanylate kinase, conserved site BER92_RS03580 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BER92_RS03580 IPR017665 Guanylate kinase BER92_RS03585 IPR012293 RNA polymerase subunit, RPB6/omega BER92_RS03585 IPR036161 RPB6/omega subunit-like superfamily BER92_RS03585 IPR003716 DNA-directed RNA polymerase, omega subunit BER92_RS03585 IPR006110 RNA polymerase, subunit omega/K/RPB6 BER92_RS03590 IPR004095 TGS BER92_RS03590 IPR007685 RelA/SpoT BER92_RS03590 IPR012676 TGS-like BER92_RS03590 IPR004811 RelA/SpoT family BER92_RS03590 IPR003607 HD/PDEase domain BER92_RS03590 IPR012675 Beta-grasp domain superfamily BER92_RS03590 IPR002912 ACT domain BER92_RS03590 IPR033655 RelA, TGS domain BER92_RS03595 IPR035959 RutC-like superfamily BER92_RS03595 IPR006175 YjgF/YER057c/UK114 family BER92_RS03595 IPR006056 RidA family BER92_RS03595 IPR019897 RidA, conserved site BER92_RS03600 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS03600 IPR014001 Helicase superfamily 1/2, ATP-binding domain BER92_RS03600 IPR012340 Nucleic acid-binding, OB-fold BER92_RS03600 IPR001650 Helicase, C-terminal BER92_RS03600 IPR011545 DEAD/DEAH box helicase domain BER92_RS03600 IPR004609 ATP-dependent DNA helicase RecG BER92_RS03600 IPR033454 RecG, wedge domain BER92_RS03610 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain BER92_RS03610 IPR036452 Ribonucleoside hydrolase-like BER92_RS03610 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site BER92_RS03610 IPR023186 Inosine/uridine-preferring nucleoside hydrolase BER92_RS03610 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA BER92_RS03615 IPR027493 Ribosomal protein L31 type B BER92_RS03615 IPR034704 L28p-like BER92_RS03615 IPR002150 Ribosomal protein L31 BER92_RS03615 IPR042105 Ribosomal protein L31 superfamily BER92_RS03620 IPR036969 Citrate synthase superfamily BER92_RS03620 IPR010953 Citrate synthase, type I BER92_RS03620 IPR016142 Citrate synthase-like, large alpha subdomain BER92_RS03620 IPR016143 Citrate synthase-like, small alpha subdomain BER92_RS03620 IPR002020 Citrate synthase BER92_RS03620 IPR024176 Citrate synthase, bacterial-type BER92_RS03620 IPR019810 Citrate synthase active site BER92_RS03630 IPR001264 Glycosyl transferase, family 51 BER92_RS03630 IPR001460 Penicillin-binding protein, transpeptidase BER92_RS03630 IPR012338 Beta-lactamase/transpeptidase-like BER92_RS03630 IPR023346 Lysozyme-like domain superfamily BER92_RS03630 IPR036950 Penicillin binding protein transglycosylase domain BER92_RS03630 IPR031376 Penicillin-binding protein, OB-like domain BER92_RS03635 IPR003494 SHS2 domain inserted in FtsA BER92_RS03635 IPR005883 Type IV pilus assembly protein PilM BER92_RS03640 IPR007813 Fimbrial assembly PilN BER92_RS03645 IPR007445 Pilus assembly protein, PilO BER92_RS03645 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BER92_RS03650 IPR007446 Pilus assembly protein PilP BER92_RS03655 IPR013355 Type IV pilus secretin PilQ BER92_RS03655 IPR011662 Secretin/TonB, short N-terminal domain BER92_RS03655 IPR005644 NolW-like BER92_RS03655 IPR021731 AMIN domain BER92_RS03655 IPR001775 GspD/PilQ family BER92_RS03655 IPR004845 Type II secretion system GspD, conserved site BER92_RS03655 IPR038591 NolW-like superfamily BER92_RS03655 IPR004846 Type II/III secretion system BER92_RS03660 IPR008490 Transposase InsH, N-terminal BER92_RS03660 IPR002559 Transposase, IS4-like BER92_RS03690 IPR008490 Transposase InsH, N-terminal BER92_RS03690 IPR002559 Transposase, IS4-like BER92_RS03695 IPR003509 Uncharacterised protein family UPF0102 BER92_RS03695 IPR011335 Restriction endonuclease type II-like BER92_RS03695 IPR011856 tRNA endonuclease-like domain superfamily BER92_RS03705 IPR018063 SAM-dependent methyltransferase RsmI, conserved site BER92_RS03705 IPR008189 rRNA small subunit methyltransferase I BER92_RS03705 IPR014776 Tetrapyrrole methylase, subdomain 2 BER92_RS03705 IPR014777 Tetrapyrrole methylase, subdomain 1 BER92_RS03705 IPR000878 Tetrapyrrole methylase BER92_RS03705 IPR035996 Tetrapyrrole methylase superfamily BER92_RS03735 IPR037914 SpoVT-AbrB domain superfamily BER92_RS03735 IPR035642 MraZ, N-terminal BER92_RS03735 IPR038619 MraZ superfamily BER92_RS03735 IPR020603 MraZ domain BER92_RS03735 IPR035644 MraZ, C-terminal BER92_RS03735 IPR003444 Transcriptional regulator MraZ BER92_RS03735 IPR007159 SpoVT-AbrB domain BER92_RS03740 IPR002903 Ribosomal RNA small subunit methyltransferase H BER92_RS03740 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily BER92_RS03740 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS03745 IPR011922 Cell division protein FtsL BER92_RS03750 IPR005311 Penicillin-binding protein, dimerisation domain BER92_RS03750 IPR037532 Peptidoglycan D,D-transpeptidase FtsI BER92_RS03750 IPR012338 Beta-lactamase/transpeptidase-like BER92_RS03750 IPR036138 Penicillin-binding protein, dimerisation domain superfamily BER92_RS03750 IPR001460 Penicillin-binding protein, transpeptidase BER92_RS03755 IPR004101 Mur ligase, C-terminal BER92_RS03755 IPR036615 Mur ligase, C-terminal domain superfamily BER92_RS03755 IPR035911 MurE/MurF, N-terminal BER92_RS03755 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase BER92_RS03755 IPR036565 Mur-like, catalytic domain superfamily BER92_RS03755 IPR013221 Mur ligase, central BER92_RS03755 IPR000713 Mur ligase, N-terminal catalytic domain BER92_RS03760 IPR035911 MurE/MurF, N-terminal BER92_RS03760 IPR036565 Mur-like, catalytic domain superfamily BER92_RS03760 IPR013221 Mur ligase, central BER92_RS03760 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase BER92_RS03760 IPR000713 Mur ligase, N-terminal catalytic domain BER92_RS03760 IPR004101 Mur ligase, C-terminal BER92_RS03760 IPR036615 Mur ligase, C-terminal domain superfamily BER92_RS03765 IPR000715 Glycosyl transferase, family 4 BER92_RS03765 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase BER92_RS03765 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site BER92_RS03770 IPR013437 Probable peptidoglycan glycosyltransferase FtsW BER92_RS03770 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA BER92_RS03775 IPR004276 Glycosyltransferase family 28, N-terminal domain BER92_RS03775 IPR007235 Glycosyl transferase, family 28, C-terminal BER92_RS03775 IPR006009 N-acetylglucosaminyltransferase, MurG BER92_RS03780 IPR036565 Mur-like, catalytic domain superfamily BER92_RS03780 IPR036615 Mur ligase, C-terminal domain superfamily BER92_RS03780 IPR013221 Mur ligase, central BER92_RS03780 IPR000713 Mur ligase, N-terminal catalytic domain BER92_RS03780 IPR005758 UDP-N-acetylmuramate--L-alanine ligase BER92_RS03780 IPR004101 Mur ligase, C-terminal BER92_RS03785 IPR011127 D-alanine--D-alanine ligase, N-terminal domain BER92_RS03785 IPR005905 D-alanine--D-alanine ligase BER92_RS03785 IPR016185 Pre-ATP-grasp domain superfamily BER92_RS03785 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site BER92_RS03785 IPR011761 ATP-grasp fold BER92_RS03785 IPR013815 ATP-grasp fold, subdomain 1 BER92_RS03785 IPR011095 D-alanine--D-alanine ligase, C-terminal BER92_RS03790 IPR013685 POTRA domain, FtsQ-type BER92_RS03790 IPR026579 Cell division protein FtsQ BER92_RS03790 IPR034746 POTRA domain BER92_RS03790 IPR005548 Cell division protein FtsQ/DivIB BER92_RS03795 IPR020823 Cell division protein FtsA BER92_RS03795 IPR003494 SHS2 domain inserted in FtsA BER92_RS03800 IPR036525 Tubulin/FtsZ, GTPase domain superfamily BER92_RS03800 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain BER92_RS03800 IPR008280 Tubulin/FtsZ, C-terminal BER92_RS03800 IPR020805 Cell division protein FtsZ, conserved site BER92_RS03800 IPR024757 Cell division protein FtsZ, C-terminal BER92_RS03800 IPR003008 Tubulin/FtsZ, GTPase domain BER92_RS03800 IPR000158 Cell division protein FtsZ BER92_RS03805 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal BER92_RS03805 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase BER92_RS03805 IPR020568 Ribosomal protein S5 domain 2-type fold BER92_RS03805 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal BER92_RS03815 IPR016047 Peptidase M23 BER92_RS03815 IPR013731 Opacity-associated protein A, N-terminal BER92_RS03815 IPR018392 LysM domain BER92_RS03815 IPR011055 Duplicated hybrid motif BER92_RS03820 IPR011130 SecA, preprotein cross-linking domain BER92_RS03820 IPR036670 SecA, preprotein cross-linking domain superfamily BER92_RS03820 IPR011115 SecA DEAD-like, N-terminal BER92_RS03820 IPR020937 SecA conserved site BER92_RS03820 IPR000185 Protein translocase subunit SecA BER92_RS03820 IPR011116 SecA Wing/Scaffold BER92_RS03820 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS03820 IPR036266 SecA, Wing/Scaffold superfamily BER92_RS03820 IPR004027 SEC-C motif BER92_RS03820 IPR014018 SecA motor DEAD BER92_RS03830 IPR000086 NUDIX hydrolase domain BER92_RS03830 IPR020084 NUDIX hydrolase, conserved site BER92_RS03830 IPR020476 NUDIX hydrolase BER92_RS03830 IPR015797 NUDIX hydrolase-like domain superfamily BER92_RS03840 IPR004620 5,10-methylenetetrahydrofolate reductase BER92_RS03840 IPR003171 Methylenetetrahydrofolate reductase BER92_RS03840 IPR004621 Eukaryotic-type methylenetetrahydrofolate reductase BER92_RS03840 IPR029041 FAD-linked oxidoreductase-like BER92_RS03850 IPR042104 Polyketide synthase, dehydratase domain superfamily BER92_RS03850 IPR020807 Polyketide synthase, dehydratase domain BER92_RS03850 IPR018201 Beta-ketoacyl synthase, active site BER92_RS03850 IPR014031 Beta-ketoacyl synthase, C-terminal BER92_RS03850 IPR014030 Beta-ketoacyl synthase, N-terminal BER92_RS03850 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BER92_RS03850 IPR036291 NAD(P)-binding domain superfamily BER92_RS03850 IPR032821 Ketoacyl-synthetase, C-terminal extension BER92_RS03850 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BER92_RS03850 IPR013149 Alcohol dehydrogenase, C-terminal BER92_RS03850 IPR013154 Alcohol dehydrogenase, N-terminal BER92_RS03850 IPR011032 GroES-like superfamily BER92_RS03850 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BER92_RS03850 IPR036736 ACP-like superfamily BER92_RS03850 IPR009081 Phosphopantetheine binding ACP domain BER92_RS03850 IPR020806 Polyketide synthase, phosphopantetheine-binding domain BER92_RS03850 IPR020843 Polyketide synthase, enoylreductase domain BER92_RS03850 IPR013968 Polyketide synthase, ketoreductase domain BER92_RS03850 IPR014043 Acyl transferase BER92_RS03850 IPR001227 Acyl transferase domain superfamily BER92_RS03850 IPR016039 Thiolase-like BER92_RS03870 IPR008490 Transposase InsH, N-terminal BER92_RS03875 IPR002514 Transposase IS3/IS911family BER92_RS03875 IPR009057 Homeobox-like domain superfamily BER92_RS03885 IPR001977 Dephospho-CoA kinase BER92_RS03885 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS03890 IPR000045 Prepilin type IV endopeptidase, peptidase domain BER92_RS03890 IPR014032 Peptidase A24A, prepilin type IV, bacterial BER92_RS03890 IPR010627 Peptidase A24A, N-terminal BER92_RS03895 IPR042094 Type II secretion system F domain superfamily BER92_RS03895 IPR003004 GspF/PilC family BER92_RS03895 IPR001992 Type II secretion system conserved site BER92_RS03895 IPR018076 Type II secretion system F domain BER92_RS03900 IPR001082 Fimbrial protein pilin BER92_RS03900 IPR012902 Prokaryotic N-terminal methylation site BER92_RS03905 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS03905 IPR007831 General secretory system II, protein E, N-terminal BER92_RS03905 IPR042181 Type II secretion system, protein E, N-terminal BER92_RS03905 IPR001482 Type II/IV secretion system protein BER92_RS03905 IPR037257 General secretory system II, protein E, N-terminal superfamily BER92_RS03905 IPR013374 ATPase, type IV, pilus assembly, PilB BER92_RS03920 IPR036597 Fido-like domain superfamily BER92_RS03920 IPR003812 Fido domain BER92_RS03925 IPR003593 AAA+ ATPase domain BER92_RS03925 IPR009057 Homeobox-like domain superfamily BER92_RS03925 IPR001789 Signal transduction response regulator, receiver domain BER92_RS03925 IPR025944 Sigma-54 interaction domain, conserved site BER92_RS03925 IPR011006 CheY-like superfamily BER92_RS03925 IPR002078 RNA polymerase sigma factor 54 interaction domain BER92_RS03925 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS03925 IPR002197 DNA binding HTH domain, Fis-type BER92_RS03925 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BER92_RS03925 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BER92_RS03930 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS03930 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS03930 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS03930 IPR005467 Histidine kinase domain BER92_RS03930 IPR000014 PAS domain BER92_RS03930 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS03930 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS03935 IPR011761 ATP-grasp fold BER92_RS03935 IPR013815 ATP-grasp fold, subdomain 1 BER92_RS03935 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type BER92_RS03935 IPR005809 Succinate--CoA synthetase, beta subunit BER92_RS03935 IPR005811 ATP-citrate lyase/succinyl-CoA ligase BER92_RS03935 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site BER92_RS03935 IPR016102 Succinyl-CoA synthetase-like BER92_RS03940 IPR003781 CoA-binding BER92_RS03940 IPR016102 Succinyl-CoA synthetase-like BER92_RS03940 IPR005810 Succinyl-CoA ligase, alpha subunit BER92_RS03940 IPR005811 ATP-citrate lyase/succinyl-CoA ligase BER92_RS03940 IPR036291 NAD(P)-binding domain superfamily BER92_RS03940 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site BER92_RS03940 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site BER92_RS03945 IPR022310 NAD/GMP synthase BER92_RS03945 IPR003694 NAD(+) synthetase BER92_RS03945 IPR000132 Nitrilase/cyanide hydratase, conserved site BER92_RS03945 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS03945 IPR014445 Glutamine-dependent NAD(+) synthetase BER92_RS03945 IPR036526 Carbon-nitrogen hydrolase superfamily BER92_RS03945 IPR003010 Carbon-nitrogen hydrolase BER92_RS03950 IPR011990 Tetratricopeptide-like helical domain superfamily BER92_RS03950 IPR039565 Outer membrane lipoprotein BamD-like BER92_RS03950 IPR017689 Outer membrane protein assembly factor BamD BER92_RS03955 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BER92_RS03955 IPR006225 Pseudouridine synthase, RluC/RluD BER92_RS03955 IPR002942 RNA-binding S4 domain BER92_RS03955 IPR006145 Pseudouridine synthase, RsuA/RluA BER92_RS03955 IPR036986 RNA-binding S4 domain superfamily BER92_RS03955 IPR020103 Pseudouridine synthase, catalytic domain superfamily BER92_RS03960 IPR003730 Multi-copper polyphenol oxidoreductase BER92_RS03960 IPR011324 Cytotoxic necrotizing factor-like, catalytic BER92_RS03960 IPR038371 Multi-copper polyphenol oxidoreductase superfamily BER92_RS03965 IPR017511 PQQ-dependent membrane bound dehydrogenase BER92_RS03965 IPR002372 Pyrrolo-quinoline quinone repeat BER92_RS03965 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BER92_RS03965 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BER92_RS03985 IPR001830 Glycosyl transferase, family 20 BER92_RS03985 IPR012766 Alpha,alpha-trehalose-phosphate synthase BER92_RS03990 IPR008928 Six-hairpin glycosidase superfamily BER92_RS03990 IPR012341 Six-hairpin glycosidase-like superfamily BER92_RS03990 IPR011613 GH15-like domain BER92_RS03995 IPR036412 HAD-like superfamily BER92_RS03995 IPR023214 HAD superfamily BER92_RS03995 IPR006379 HAD-superfamily hydrolase, subfamily IIB BER92_RS03995 IPR003337 Trehalose-phosphatase BER92_RS04000 IPR012910 TonB-dependent receptor, plug domain BER92_RS04000 IPR039426 Vitamin B12 transporter BtuB-like BER92_RS04000 IPR010101 TonB-dependent vitamin B12 transporter BtuB BER92_RS04000 IPR010917 TonB-dependent receptor, conserved site BER92_RS04000 IPR037066 TonB-dependent receptor, plug domain superfamily BER92_RS04000 IPR000531 TonB-dependent receptor-like, beta-barrel BER92_RS04000 IPR010916 TonB box, conserved site BER92_RS04000 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BER92_RS04030 IPR000305 GIY-YIG endonuclease BER92_RS04030 IPR035901 GIY-YIG endonuclease superfamily BER92_RS04040 IPR002514 Transposase IS3/IS911family BER92_RS04040 IPR009057 Homeobox-like domain superfamily BER92_RS04055 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS04055 IPR018317 Queuosine biosynthesis protein QueC BER92_RS04085 IPR011545 DEAD/DEAH box helicase domain BER92_RS04085 IPR018982 RQC domain BER92_RS04085 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial BER92_RS04085 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain BER92_RS04085 IPR014001 Helicase superfamily 1/2, ATP-binding domain BER92_RS04085 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS04085 IPR001650 Helicase, C-terminal BER92_RS04085 IPR010997 HRDC-like superfamily BER92_RS04085 IPR002121 HRDC domain BER92_RS04085 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS04085 IPR004589 DNA helicase, ATP-dependent, RecQ type BER92_RS04090 IPR008331 Ferritin/DPS protein domain BER92_RS04090 IPR009078 Ferritin-like superfamily BER92_RS04090 IPR012347 Ferritin-like BER92_RS04090 IPR023188 DNA-binding protein Dps, conserved site BER92_RS04090 IPR002177 DNA-binding protein Dps BER92_RS04095 IPR001650 Helicase, C-terminal BER92_RS04095 IPR003593 AAA+ ATPase domain BER92_RS04095 IPR010222 RNA helicase HrpA BER92_RS04095 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS04095 IPR024590 RNA helicase HrpA, C-terminal BER92_RS04095 IPR014001 Helicase superfamily 1/2, ATP-binding domain BER92_RS04095 IPR007502 Helicase-associated domain BER92_RS04095 IPR011709 Domain of unknown function DUF1605 BER92_RS04095 IPR011545 DEAD/DEAH box helicase domain BER92_RS04100 IPR023885 4Fe4S-binding SPASM domain BER92_RS04100 IPR013785 Aldolase-type TIM barrel BER92_RS04100 IPR007197 Radical SAM BER92_RS04100 IPR017200 Coenzyme PQQ synthesis protein E BER92_RS04100 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria BER92_RS04105 IPR022479 Coenzyme PQQ synthesis D, bacteria BER92_RS04105 IPR008792 Coenzyme PQQ synthesis protein D BER92_RS04105 IPR041881 Coenzyme PQQ synthesis protein D superfamily BER92_RS04110 IPR039068 Pyrroloquinoline-quinone synthase-like BER92_RS04110 IPR011845 Coenzyme PQQ biosynthesis protein C BER92_RS04110 IPR004305 Thiaminase-2/PQQC BER92_RS04110 IPR016084 Haem oxygenase-like, multi-helical BER92_RS04115 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BER92_RS04115 IPR011842 Coenzyme PQQ biosynthesis protein B BER92_RS04115 IPR001279 Metallo-beta-lactamase BER92_RS04120 IPR007685 RelA/SpoT BER92_RS04120 IPR004811 RelA/SpoT family BER92_RS04120 IPR033655 RelA, TGS domain BER92_RS04120 IPR012675 Beta-grasp domain superfamily BER92_RS04120 IPR003607 HD/PDEase domain BER92_RS04120 IPR004095 TGS BER92_RS04120 IPR002912 ACT domain BER92_RS04120 IPR012676 TGS-like BER92_RS04135 IPR012338 Beta-lactamase/transpeptidase-like BER92_RS04135 IPR001264 Glycosyl transferase, family 51 BER92_RS04135 IPR023346 Lysozyme-like domain superfamily BER92_RS04135 IPR011813 Penicillin-binding protein 1B BER92_RS04135 IPR036950 Penicillin binding protein transglycosylase domain BER92_RS04135 IPR001460 Penicillin-binding protein, transpeptidase BER92_RS04135 IPR028166 Bifunctional transglycosylase second domain BER92_RS04145 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS04145 IPR006935 Helicase/UvrB, N-terminal BER92_RS04145 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type BER92_RS04145 IPR014001 Helicase superfamily 1/2, ATP-binding domain BER92_RS04145 IPR006555 ATP-dependent helicase, C-terminal BER92_RS04150 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB BER92_RS04150 IPR000905 Gcp-like domain BER92_RS04160 IPR011761 ATP-grasp fold BER92_RS04160 IPR013815 ATP-grasp fold, subdomain 1 BER92_RS04160 IPR006284 Glutathione synthetase, prokaryotic BER92_RS04160 IPR004218 Prokaryotic glutathione synthetase, ATP-binding BER92_RS04160 IPR004215 Prokaryotic glutathione synthetase, N-terminal BER92_RS04160 IPR016185 Pre-ATP-grasp domain superfamily BER92_RS04165 IPR001789 Signal transduction response regulator, receiver domain BER92_RS04165 IPR011006 CheY-like superfamily BER92_RS04170 IPR011006 CheY-like superfamily BER92_RS04170 IPR001789 Signal transduction response regulator, receiver domain BER92_RS04175 IPR039315 Chemotaxis protein CheW BER92_RS04175 IPR036061 CheW-like domain superfamily BER92_RS04175 IPR002545 CheW-like domain BER92_RS04180 IPR004090 Chemotaxis methyl-accepting receptor BER92_RS04180 IPR003660 HAMP domain BER92_RS04180 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BER92_RS04180 IPR029095 NarX-like, N-terminal BER92_RS04185 IPR002545 CheW-like domain BER92_RS04185 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS04185 IPR036641 HPT domain superfamily BER92_RS04185 IPR001789 Signal transduction response regulator, receiver domain BER92_RS04185 IPR036061 CheW-like domain superfamily BER92_RS04185 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BER92_RS04185 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS04185 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS04185 IPR011006 CheY-like superfamily BER92_RS04185 IPR005467 Histidine kinase domain BER92_RS04200 IPR016181 Acyl-CoA N-acyltransferase BER92_RS04200 IPR000182 GNAT domain BER92_RS04215 IPR023648 Copper homeostasis CutC domain BER92_RS04215 IPR036822 Copper homeostasis (CutC) domain superfamily BER92_RS04215 IPR005627 Copper homeostasis protein CutC BER92_RS04240 IPR001598 Transposase, IS30, conserved site BER92_RS04240 IPR009057 Homeobox-like domain superfamily BER92_RS04240 IPR001584 Integrase, catalytic core BER92_RS04240 IPR012337 Ribonuclease H-like superfamily BER92_RS04240 IPR036397 Ribonuclease H superfamily BER92_RS04245 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BER92_RS04245 IPR037026 Vgr protein, OB-fold domain superfamily BER92_RS04245 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BER92_RS04245 IPR010609 Gp5, C-terminal BER92_RS04245 IPR006531 Gp5 N-terminal BER92_RS04280 IPR002514 Transposase IS3/IS911family BER92_RS04280 IPR009057 Homeobox-like domain superfamily BER92_RS04285 IPR001584 Integrase, catalytic core BER92_RS04285 IPR036397 Ribonuclease H superfamily BER92_RS04285 IPR012337 Ribonuclease H-like superfamily BER92_RS04285 IPR025948 HTH-like domain BER92_RS04290 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BER92_RS04290 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS04290 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm BER92_RS04290 IPR002300 Aminoacyl-tRNA synthetase, class Ia BER92_RS04290 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm BER92_RS04290 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BER92_RS04290 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily BER92_RS04290 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BER92_RS04290 IPR033705 Valyl tRNA synthetase, anticodon-binding domain BER92_RS04290 IPR002303 Valine-tRNA ligase BER92_RS04290 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BER92_RS04300 IPR023042 Peptidase M17, leucine aminopeptidase BER92_RS04300 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal BER92_RS04300 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal BER92_RS04300 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B BER92_RS04310 IPR030923 LPS export ABC transporter permease LptG BER92_RS04310 IPR005495 Permease LptG/LptF-related BER92_RS04325 IPR010998 Integrase/recombinase, N-terminal BER92_RS04325 IPR002104 Integrase, catalytic domain BER92_RS04325 IPR013762 Integrase-like, catalytic domain superfamily BER92_RS04325 IPR023009 Tyrosine recombinase XerC/XerD BER92_RS04325 IPR011932 Tyrosine recombinase XerD BER92_RS04325 IPR004107 Integrase, SAM-like, N-terminal BER92_RS04325 IPR011010 DNA breaking-rejoining enzyme, catalytic core BER92_RS04330 IPR017937 Thioredoxin, conserved site BER92_RS04330 IPR036249 Thioredoxin-like superfamily BER92_RS04330 IPR012336 Thioredoxin-like fold BER92_RS04330 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily BER92_RS04330 IPR013766 Thioredoxin domain BER92_RS04330 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal BER92_RS04330 IPR033954 Disulphide bond isomerase, DsbC/G BER92_RS04335 IPR010918 PurM-like, C-terminal domain BER92_RS04335 IPR029062 Class I glutamine amidotransferase-like BER92_RS04335 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal BER92_RS04335 IPR017926 Glutamine amidotransferase BER92_RS04335 IPR010073 Phosphoribosylformylglycinamidine synthase PurL BER92_RS04335 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily BER92_RS04335 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain BER92_RS04335 IPR036676 PurM-like, C-terminal domain superfamily BER92_RS04335 IPR036921 PurM-like, N-terminal domain superfamily BER92_RS04345 IPR024973 ESPR domain BER92_RS04345 IPR008640 Head domain of trimeric autotransporter adhesin BER92_RS04345 IPR008635 Coiled stalk of trimeric autotransporter adhesin BER92_RS04345 IPR011049 Serralysin-like metalloprotease, C-terminal BER92_RS04345 IPR005594 YadA-like, C-terminal BER92_RS04350 IPR023827 Peptidase S8, subtilisin, Asp-active site BER92_RS04350 IPR007280 Peptidase, C-terminal, archaeal/bacterial BER92_RS04350 IPR034176 Peptidase MprA-like catalytic domain BER92_RS04350 IPR036852 Peptidase S8/S53 domain superfamily BER92_RS04350 IPR022398 Peptidase S8, subtilisin, His-active site BER92_RS04350 IPR015500 Peptidase S8, subtilisin-related BER92_RS04350 IPR023828 Peptidase S8, subtilisin, Ser-active site BER92_RS04350 IPR000209 Peptidase S8/S53 domain BER92_RS04355 IPR003593 AAA+ ATPase domain BER92_RS04355 IPR007831 General secretory system II, protein E, N-terminal BER92_RS04355 IPR013369 Type II secretion system GspE BER92_RS04355 IPR042181 Type II secretion system, protein E, N-terminal BER92_RS04355 IPR037257 General secretory system II, protein E, N-terminal superfamily BER92_RS04355 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS04355 IPR001482 Type II/IV secretion system protein BER92_RS04360 IPR003004 GspF/PilC family BER92_RS04360 IPR001992 Type II secretion system conserved site BER92_RS04360 IPR042094 Type II secretion system F domain superfamily BER92_RS04360 IPR018076 Type II secretion system F domain BER92_RS04365 IPR000983 Bacterial general secretion pathway protein G-type pilin BER92_RS04365 IPR012902 Prokaryotic N-terminal methylation site BER92_RS04365 IPR010054 General secretion pathway protein G BER92_RS04365 IPR013545 Type II secretion system protein G BER92_RS04370 IPR002416 Type II secretion system protein H BER92_RS04370 IPR022346 General secretion pathway, GspH BER92_RS04375 IPR012902 Prokaryotic N-terminal methylation site BER92_RS04375 IPR010052 Type II secretion system protein I BER92_RS04380 IPR012902 Prokaryotic N-terminal methylation site BER92_RS04385 IPR005628 General secretion pathway protein K BER92_RS04385 IPR038072 GspK, central domain superfamily BER92_RS04390 IPR007813 Fimbrial assembly PilN BER92_RS04395 IPR034756 Type II secretion system (T2SS), protein M subtype b BER92_RS04405 IPR001775 GspD/PilQ family BER92_RS04405 IPR005644 NolW-like BER92_RS04405 IPR038591 NolW-like superfamily BER92_RS04405 IPR004846 Type II/III secretion system BER92_RS04405 IPR013356 Type II secretion system GspD BER92_RS04405 IPR004845 Type II secretion system GspD, conserved site BER92_RS04415 IPR017722 Phosphonate utilization transcriptional regulator PhnR BER92_RS04415 IPR011663 UbiC transcription regulator-associated BER92_RS04415 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS04415 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BER92_RS04415 IPR000524 Transcription regulator HTH, GntR BER92_RS04415 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS04425 IPR037066 TonB-dependent receptor, plug domain superfamily BER92_RS04425 IPR030149 TonB-dependent siderophore receptor FcuA/FatA BER92_RS04425 IPR012910 TonB-dependent receptor, plug domain BER92_RS04425 IPR010105 TonB-dependent siderophore receptor BER92_RS04425 IPR010917 TonB-dependent receptor, conserved site BER92_RS04425 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BER92_RS04425 IPR010916 TonB box, conserved site BER92_RS04425 IPR000531 TonB-dependent receptor-like, beta-barrel BER92_RS04425 IPR039423 TonB-dependent receptor-like BER92_RS04435 IPR029044 Nucleotide-diphospho-sugar transferases BER92_RS04445 IPR008410 Cellulose synthase operon C, C-terminal BER92_RS04445 IPR019734 Tetratricopeptide repeat BER92_RS04445 IPR011990 Tetratricopeptide-like helical domain superfamily BER92_RS04445 IPR013026 Tetratricopeptide repeat-containing domain BER92_RS04445 IPR003921 Cellulose synthase, subunit C BER92_RS04465 IPR036821 Peptide deformylase superfamily BER92_RS04465 IPR023635 Peptide deformylase BER92_RS04470 IPR003593 AAA+ ATPase domain BER92_RS04470 IPR003439 ABC transporter-like BER92_RS04470 IPR022374 Energy-dependent translational throttle protein EttA BER92_RS04470 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS04470 IPR017871 ABC transporter, conserved site BER92_RS04470 IPR032781 ABC-transporter extension domain BER92_RS04480 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site BER92_RS04480 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS04480 IPR001085 Serine hydroxymethyltransferase BER92_RS04480 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BER92_RS04480 IPR039429 Serine hydroxymethyltransferase-like domain BER92_RS04480 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS04485 IPR005144 ATP-cone domain BER92_RS04485 IPR003796 Ribonucleotide reductase regulator NrdR-like BER92_RS04495 IPR011549 Riboflavin-specific deaminase, C-terminal BER92_RS04495 IPR002125 Cytidine and deoxycytidylate deaminase domain BER92_RS04495 IPR016193 Cytidine deaminase-like BER92_RS04495 IPR016192 APOBEC/CMP deaminase, zinc-binding BER92_RS04495 IPR004794 Riboflavin biosynthesis protein RibD BER92_RS04495 IPR024072 Dihydrofolate reductase-like domain superfamily BER92_RS04495 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal BER92_RS04505 IPR008490 Transposase InsH, N-terminal BER92_RS04510 IPR002559 Transposase, IS4-like BER92_RS04510 IPR008490 Transposase InsH, N-terminal BER92_RS04515 IPR000683 Oxidoreductase, N-terminal BER92_RS04515 IPR036291 NAD(P)-binding domain superfamily BER92_RS04550 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BER92_RS04550 IPR036291 NAD(P)-binding domain superfamily BER92_RS04550 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site BER92_RS04550 IPR000043 Adenosylhomocysteinase-like BER92_RS04550 IPR042172 Adenosylhomocysteinase-like superfamily BER92_RS04560 IPR021135 Phosphoenolpyruvate carboxylase BER92_RS04560 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type BER92_RS04560 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site BER92_RS04560 IPR033129 Phosphoenolpyruvate carboxylase, His active site BER92_RS04560 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BER92_RS04580 IPR022631 S-adenosylmethionine synthetase, conserved site BER92_RS04580 IPR022630 S-adenosylmethionine synthetase, C-terminal BER92_RS04580 IPR022629 S-adenosylmethionine synthetase, central domain BER92_RS04580 IPR022628 S-adenosylmethionine synthetase, N-terminal BER92_RS04580 IPR022636 S-adenosylmethionine synthetase superfamily BER92_RS04580 IPR002133 S-adenosylmethionine synthetase BER92_RS04590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS04590 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal BER92_RS04590 IPR041698 Methyltransferase domain 25 BER92_RS04590 IPR023506 Trans-aconitate 2-methyltransferase BER92_RS04595 IPR018517 tRNA-dihydrouridine synthase, conserved site BER92_RS04595 IPR032887 tRNA-dihydrouridine synthase B BER92_RS04595 IPR035587 DUS-like, FMN-binding domain BER92_RS04595 IPR013785 Aldolase-type TIM barrel BER92_RS04595 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal BER92_RS04595 IPR001269 tRNA-dihydrouridine synthase BER92_RS04595 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 BER92_RS04610 IPR036945 Diacylglycerol kinase (DAGK) superfamily BER92_RS04610 IPR033718 Diacylglycerol kinase, prokaryotic BER92_RS04610 IPR000829 DAGK family BER92_RS04620 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS04620 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS04620 IPR005467 Histidine kinase domain BER92_RS04620 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS04620 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS04620 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS04620 IPR013727 Two-component sensor kinase, N-terminal BER92_RS04625 IPR016032 Signal transduction response regulator, C-terminal effector BER92_RS04625 IPR039420 Transcriptional regulatory protein WalR-like BER92_RS04625 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS04625 IPR001867 OmpR/PhoB-type DNA-binding domain BER92_RS04625 IPR011006 CheY-like superfamily BER92_RS04625 IPR001789 Signal transduction response regulator, receiver domain BER92_RS04630 IPR036514 SGNH hydrolase superfamily BER92_RS04630 IPR013830 SGNH hydrolase-type esterase domain BER92_RS04635 IPR003593 AAA+ ATPase domain BER92_RS04635 IPR003439 ABC transporter-like BER92_RS04635 IPR017871 ABC transporter, conserved site BER92_RS04635 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS04660 IPR008490 Transposase InsH, N-terminal BER92_RS04680 IPR023210 NADP-dependent oxidoreductase domain BER92_RS04680 IPR036812 NADP-dependent oxidoreductase domain superfamily BER92_RS04685 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain BER92_RS04685 IPR002668 Concentrative nucleoside transporter N-terminal domain BER92_RS04685 IPR011657 Concentrative nucleoside transporter C-terminal domain BER92_RS04685 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial BER92_RS04685 IPR008276 Concentrative nucleoside transporter BER92_RS04690 IPR029056 Ribokinase-like BER92_RS04690 IPR002139 Ribokinase/fructokinase BER92_RS04690 IPR011611 Carbohydrate kinase PfkB BER92_RS04690 IPR004788 Ribose 5-phosphate isomerase, type A BER92_RS04690 IPR037171 NagB/RpiA transferase-like BER92_RS04690 IPR011877 Ribokinase BER92_RS04705 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt BER92_RS04710 IPR020940 Thymidylate synthase, active site BER92_RS04710 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily BER92_RS04710 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain BER92_RS04710 IPR000398 Thymidylate synthase BER92_RS04720 IPR024072 Dihydrofolate reductase-like domain superfamily BER92_RS04720 IPR012259 Dihydrofolate reductase BER92_RS04720 IPR017925 Dihydrofolate reductase conserved site BER92_RS04720 IPR001796 Dihydrofolate reductase domain BER92_RS04725 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase BER92_RS04725 IPR029052 Metallo-dependent phosphatase-like BER92_RS04725 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BER92_RS04725 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) BER92_RS04730 IPR036767 ApaG domain superfamily BER92_RS04730 IPR023065 Uncharacterised protein family ApaG BER92_RS04730 IPR007474 ApaG domain BER92_RS04735 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm BER92_RS04735 IPR023165 rRNA adenine dimethylase-like BER92_RS04735 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site BER92_RS04735 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal BER92_RS04735 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS04735 IPR011530 Ribosomal RNA adenine dimethylase BER92_RS04740 IPR005255 PdxA family BER92_RS04740 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase BER92_RS04745 IPR023034 Peptidyl-prolyl isomerase SurA BER92_RS04745 IPR027304 Trigger factor/SurA domain superfamily BER92_RS04745 IPR015391 SurA N-terminal BER92_RS04745 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type BER92_RS04750 IPR007543 LptD, C-terminal BER92_RS04750 IPR020889 LPS-assembly protein LptD BER92_RS04750 IPR005653 Organic solvent tolerance-like, N-terminal BER92_RS04755 IPR000286 Histone deacetylase family BER92_RS04755 IPR023696 Ureohydrolase domain superfamily BER92_RS04755 IPR023801 Histone deacetylase domain BER92_RS04755 IPR037138 Histone deacetylase domain superfamily BER92_RS04760 IPR036451 Cobalamin adenosyltransferase-like superfamily BER92_RS04760 IPR016030 Cobalamin adenosyltransferase-like BER92_RS04760 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type BER92_RS04770 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 BER92_RS04770 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS04770 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site BER92_RS04770 IPR002938 FAD-binding domain BER92_RS04770 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase BER92_RS04775 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 BER92_RS04775 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site BER92_RS04775 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS04775 IPR002938 FAD-binding domain BER92_RS04790 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS04790 IPR005119 LysR, substrate-binding BER92_RS04790 IPR012787 Pca transcription factor PcaQ BER92_RS04790 IPR000847 Transcription regulator HTH, LysR BER92_RS04790 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS04800 IPR029045 ClpP/crotonase-like domain superfamily BER92_RS04800 IPR001753 Enoyl-CoA hydratase/isomerase BER92_RS04800 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BER92_RS04810 IPR013658 SMP-30/Gluconolactonase/LRE-like region BER92_RS04810 IPR005511 Senescence marker protein-30 (SMP-30) BER92_RS04810 IPR011042 Six-bladed beta-propeller, TolB-like BER92_RS04810 IPR006311 Twin-arginine translocation pathway, signal sequence BER92_RS04815 IPR006311 Twin-arginine translocation pathway, signal sequence BER92_RS04815 IPR004104 Oxidoreductase, C-terminal BER92_RS04815 IPR008354 Glucose-fructose oxidoreductase, bacterial BER92_RS04815 IPR000683 Oxidoreductase, N-terminal BER92_RS04815 IPR036291 NAD(P)-binding domain superfamily BER92_RS04820 IPR040739 RlmM ferredoxin-like domain BER92_RS04820 IPR002877 Ribosomal RNA methyltransferase FtsJ domain BER92_RS04820 IPR011224 Ribosomal RNA large subunit methyltransferase M BER92_RS04820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS04835 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain BER92_RS04835 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain BER92_RS04835 IPR000924 Glutamyl/glutaminyl-tRNA synthetase BER92_RS04835 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily BER92_RS04835 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal BER92_RS04835 IPR022861 Glutamine-tRNA ligase, bacterial BER92_RS04835 IPR004514 Glutamine-tRNA synthetase BER92_RS04835 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BER92_RS04835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS04835 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily BER92_RS04855 IPR000792 Transcription regulator LuxR, C-terminal BER92_RS04855 IPR001789 Signal transduction response regulator, receiver domain BER92_RS04855 IPR016032 Signal transduction response regulator, C-terminal effector BER92_RS04855 IPR011006 CheY-like superfamily BER92_RS04860 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily BER92_RS04860 IPR002569 Peptide methionine sulphoxide reductase MsrA BER92_RS04865 IPR004730 Transaldolase type 1 BER92_RS04865 IPR001585 Transaldolase/Fructose-6-phosphate aldolase BER92_RS04865 IPR013785 Aldolase-type TIM barrel BER92_RS04865 IPR018225 Transaldolase, active site BER92_RS04870 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily BER92_RS04870 IPR028625 Regulator of nucleoside diphosphate kinase BER92_RS04870 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain BER92_RS04870 IPR023459 Transcription elongation factor GreA/GreB family BER92_RS04870 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal BER92_RS04875 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS04875 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS04875 IPR000847 Transcription regulator HTH, LysR BER92_RS04875 IPR005119 LysR, substrate-binding BER92_RS04880 IPR012081 Alkyl hydroperoxide reductase subunit F BER92_RS04880 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS04880 IPR002109 Glutaredoxin BER92_RS04880 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site BER92_RS04880 IPR012336 Thioredoxin-like fold BER92_RS04880 IPR036249 Thioredoxin-like superfamily BER92_RS04880 IPR023753 FAD/NAD(P)-binding domain BER92_RS04885 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BER92_RS04885 IPR024706 Peroxiredoxin, AhpC-type BER92_RS04885 IPR019479 Peroxiredoxin, C-terminal BER92_RS04885 IPR036249 Thioredoxin-like superfamily BER92_RS04885 IPR017559 Alkyl hydroperoxide reductase subunit C BER92_RS04885 IPR013766 Thioredoxin domain BER92_RS04890 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BER92_RS04890 IPR040758 Release factor glutamine methyltransferase, N-terminal domain BER92_RS04890 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific BER92_RS04890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS04890 IPR004556 Methyltransferase HemK-like BER92_RS04890 IPR007848 Methyltransferase small domain BER92_RS04895 IPR000073 Alpha/beta hydrolase fold-1 BER92_RS04895 IPR002410 Peptidase S33 BER92_RS04895 IPR005944 Proline iminopeptidase BER92_RS04895 IPR029058 Alpha/Beta hydrolase fold BER92_RS04910 IPR000086 NUDIX hydrolase domain BER92_RS04910 IPR004385 Nucleoside diphosphate pyrophosphatase BER92_RS04910 IPR020084 NUDIX hydrolase, conserved site BER92_RS04910 IPR015797 NUDIX hydrolase-like domain superfamily BER92_RS04915 IPR012337 Ribonuclease H-like superfamily BER92_RS04915 IPR002298 DNA polymerase A BER92_RS04915 IPR008918 Helix-hairpin-helix motif, class 2 BER92_RS04915 IPR029060 PIN-like domain superfamily BER92_RS04915 IPR002421 5'-3' exonuclease, N-terminal BER92_RS04915 IPR036397 Ribonuclease H superfamily BER92_RS04915 IPR018320 DNA polymerase 1 BER92_RS04915 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BER92_RS04915 IPR020045 DNA polymerase I-like, H3TH domain BER92_RS04915 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal BER92_RS04915 IPR019760 DNA-directed DNA polymerase, family A, conserved site BER92_RS04915 IPR002562 3'-5' exonuclease domain BER92_RS04915 IPR001098 DNA-directed DNA polymerase, family A, palm domain BER92_RS04940 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS04940 IPR013325 RNA polymerase sigma factor, region 2 BER92_RS04940 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BER92_RS04940 IPR007627 RNA polymerase sigma-70 region 2 BER92_RS04940 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BER92_RS04940 IPR014284 RNA polymerase sigma-70 like domain BER92_RS04940 IPR039425 RNA polymerase sigma-70 like BER92_RS04940 IPR013324 RNA polymerase sigma factor, region 3/4-like BER92_RS04955 IPR036038 Aminotransferase-like, PLP-dependent enzymes BER92_RS04955 IPR001544 Aminotransferase class IV BER92_RS04955 IPR005786 Branched-chain amino acid aminotransferase II BER92_RS04955 IPR033939 Branched-chain aminotransferase BER92_RS04955 IPR018300 Aminotransferase, class IV, conserved site BER92_RS04970 IPR034176 Peptidase MprA-like catalytic domain BER92_RS04970 IPR015500 Peptidase S8, subtilisin-related BER92_RS04970 IPR022398 Peptidase S8, subtilisin, His-active site BER92_RS04970 IPR023827 Peptidase S8, subtilisin, Asp-active site BER92_RS04970 IPR023828 Peptidase S8, subtilisin, Ser-active site BER92_RS04970 IPR000209 Peptidase S8/S53 domain BER92_RS04970 IPR007280 Peptidase, C-terminal, archaeal/bacterial BER92_RS04970 IPR036852 Peptidase S8/S53 domain superfamily BER92_RS04975 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC BER92_RS04975 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily BER92_RS04975 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain BER92_RS04990 IPR005025 NADPH-dependent FMN reductase-like BER92_RS04990 IPR010089 Flavoprotein WrbA-like BER92_RS04990 IPR008254 Flavodoxin/nitric oxide synthase BER92_RS04990 IPR029039 Flavoprotein-like superfamily BER92_RS04990 IPR001226 Flavodoxin, conserved site BER92_RS04995 IPR023679 Uncharacterised protein family UPF0761, bacterial BER92_RS04995 IPR017039 Virulence factor BrkB BER92_RS05000 IPR036249 Thioredoxin-like superfamily BER92_RS05000 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE BER92_RS05000 IPR013740 Redoxin BER92_RS05000 IPR013766 Thioredoxin domain BER92_RS05000 IPR017937 Thioredoxin, conserved site BER92_RS05010 IPR022486 Polyphosphate kinase 2, PA0141 BER92_RS05010 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS05010 IPR016898 Polyphosphate kinase 2 BER92_RS05010 IPR022488 Polyphosphate kinase-2-related BER92_RS05015 IPR036425 MoaB/Mog-like domain superfamily BER92_RS05015 IPR008284 Molybdenum cofactor biosynthesis, conserved site BER92_RS05015 IPR012245 Molybdenum cofactor biosynthesis protein MoaB BER92_RS05015 IPR001453 MoaB/Mog domain BER92_RS05015 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria BER92_RS05025 IPR004373 Peptide chain release factor 1 BER92_RS05025 IPR000352 Peptide chain release factor class I BER92_RS05025 IPR005139 Peptide chain release factor BER92_RS05030 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal BER92_RS05030 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily BER92_RS05030 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BER92_RS05030 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily BER92_RS05030 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase BER92_RS05030 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain BER92_RS05030 IPR018214 Glutamyl-tRNA reductase, conserved site BER92_RS05030 IPR036291 NAD(P)-binding domain superfamily BER92_RS05035 IPR019734 Tetratricopeptide repeat BER92_RS05035 IPR011990 Tetratricopeptide-like helical domain superfamily BER92_RS05035 IPR013026 Tetratricopeptide repeat-containing domain BER92_RS05040 IPR029046 Lipoprotein localisation LolA/LolB/LppX BER92_RS05040 IPR004565 Outer membrane lipoprotein LolB BER92_RS05045 IPR013750 GHMP kinase, C-terminal domain BER92_RS05045 IPR036554 GHMP kinase, C-terminal domain superfamily BER92_RS05045 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BER92_RS05045 IPR020568 Ribosomal protein S5 domain 2-type fold BER92_RS05045 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase BER92_RS05045 IPR006204 GHMP kinase N-terminal domain BER92_RS05055 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site BER92_RS05055 IPR029057 Phosphoribosyltransferase-like BER92_RS05055 IPR005946 Ribose-phosphate pyrophosphokinase BER92_RS05055 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type BER92_RS05055 IPR000836 Phosphoribosyltransferase domain BER92_RS05055 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain BER92_RS05060 IPR020057 Ribosomal protein L25, beta domain BER92_RS05060 IPR020055 Ribosomal protein L25, short-form BER92_RS05060 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily BER92_RS05060 IPR037121 Ribosomal protein L25, C-terminal BER92_RS05060 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal BER92_RS05060 IPR029751 Ribosomal protein L25 BER92_RS05060 IPR001021 Ribosomal protein L25, long-form BER92_RS05065 IPR036416 Peptidyl-tRNA hydrolase superfamily BER92_RS05065 IPR018171 Peptidyl-tRNA hydrolase, conserved site BER92_RS05065 IPR001328 Peptidyl-tRNA hydrolase BER92_RS05070 IPR041706 YchF, N-terminal BER92_RS05070 IPR012675 Beta-grasp domain superfamily BER92_RS05070 IPR023192 TGS-like domain superfamily BER92_RS05070 IPR012676 TGS-like BER92_RS05070 IPR004095 TGS BER92_RS05070 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS05070 IPR013029 YchF, C-terminal domain BER92_RS05070 IPR006073 GTP binding domain BER92_RS05070 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 BER92_RS05070 IPR031167 OBG-type guanine nucleotide-binding (G) domain BER92_RS05090 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS05090 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle BER92_RS05090 IPR033720 Elongation factor Tu, domain 2 BER92_RS05090 IPR005225 Small GTP-binding protein domain BER92_RS05090 IPR000795 Transcription factor, GTP-binding domain BER92_RS05090 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BER92_RS05090 IPR009000 Translation protein, beta-barrel domain superfamily BER92_RS05090 IPR004161 Translation elongation factor EFTu-like, domain 2 BER92_RS05090 IPR031157 Tr-type G domain, conserved site BER92_RS05090 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BER92_RS05090 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain BER92_RS05100 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit BER92_RS05100 IPR038379 SecE superfamily BER92_RS05100 IPR005807 SecE subunit of protein translocation complex, bacterial-like BER92_RS05105 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site BER92_RS05105 IPR005824 KOW BER92_RS05105 IPR008991 Translation protein SH3-like domain superfamily BER92_RS05105 IPR001062 Transcription antitermination protein, NusG BER92_RS05105 IPR006645 NusG, N-terminal BER92_RS05105 IPR014722 Ribosomal protein L2, domain 2 BER92_RS05105 IPR036735 NusG, N-terminal domain superfamily BER92_RS05110 IPR000911 Ribosomal protein L11/L12 BER92_RS05110 IPR036769 Ribosomal protein L11, C-terminal domain superfamily BER92_RS05110 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily BER92_RS05110 IPR006519 Ribosomal protein L11, bacterial-type BER92_RS05110 IPR020783 Ribosomal protein L11, C-terminal BER92_RS05110 IPR020785 Ribosomal protein L11, conserved site BER92_RS05110 IPR020784 Ribosomal protein L11, N-terminal BER92_RS05115 IPR002143 Ribosomal protein L1 BER92_RS05115 IPR023674 Ribosomal protein L1-like BER92_RS05115 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein BER92_RS05115 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich BER92_RS05115 IPR023673 Ribosomal protein L1, conserved site BER92_RS05115 IPR005878 Ribosomal protein L1, bacterial-type BER92_RS05120 IPR022973 Ribosomal protein L10 BER92_RS05120 IPR001790 Ribosomal protein L10P BER92_RS05125 IPR000206 Ribosomal protein L7/L12 BER92_RS05125 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily BER92_RS05125 IPR008932 Ribosomal protein L7/L12, oligomerisation BER92_RS05125 IPR013823 Ribosomal protein L7/L12, C-terminal BER92_RS05125 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BER92_RS05130 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain BER92_RS05130 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type BER92_RS05130 IPR015712 DNA-directed RNA polymerase, subunit 2 BER92_RS05130 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily BER92_RS05130 IPR007641 RNA polymerase Rpb2, domain 7 BER92_RS05130 IPR007121 RNA polymerase, beta subunit, conserved site BER92_RS05130 IPR007645 RNA polymerase Rpb2, domain 3 BER92_RS05130 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain BER92_RS05130 IPR007644 RNA polymerase, beta subunit, protrusion BER92_RS05130 IPR037034 RNA polymerase Rpb2, domain 2 superfamily BER92_RS05130 IPR007642 RNA polymerase Rpb2, domain 2 BER92_RS05130 IPR014724 RNA polymerase Rpb2, OB-fold BER92_RS05135 IPR007080 RNA polymerase Rpb1, domain 1 BER92_RS05135 IPR007083 RNA polymerase Rpb1, domain 4 BER92_RS05135 IPR000722 RNA polymerase, alpha subunit BER92_RS05135 IPR042102 RNA polymerase Rpb1, domain 3 superfamily BER92_RS05135 IPR007066 RNA polymerase Rpb1, domain 3 BER92_RS05135 IPR006592 RNA polymerase, N-terminal BER92_RS05135 IPR007081 RNA polymerase Rpb1, domain 5 BER92_RS05135 IPR038120 RNA polymerase Rpb1, funnel domain superfamily BER92_RS05135 IPR012754 DNA-directed RNA polymerase, subunit beta-prime BER92_RS05140 IPR005679 Ribosomal protein S12, bacterial-type BER92_RS05140 IPR012340 Nucleic acid-binding, OB-fold BER92_RS05140 IPR006032 Ribosomal protein S12/S23 BER92_RS05145 IPR036823 Ribosomal protein S7 domain superfamily BER92_RS05145 IPR005717 Ribosomal protein S7, bacterial/organellar-type BER92_RS05145 IPR023798 Ribosomal protein S7 domain BER92_RS05145 IPR020606 Ribosomal protein S7, conserved site BER92_RS05145 IPR000235 Ribosomal protein S5/S7 BER92_RS05150 IPR031157 Tr-type G domain, conserved site BER92_RS05150 IPR000795 Transcription factor, GTP-binding domain BER92_RS05150 IPR009000 Translation protein, beta-barrel domain superfamily BER92_RS05150 IPR035647 EF-G domain III/V-like BER92_RS05150 IPR035649 EFG, domain V BER92_RS05150 IPR004161 Translation elongation factor EFTu-like, domain 2 BER92_RS05150 IPR005517 Translation elongation factor EFG/EF2, domain IV BER92_RS05150 IPR000640 Elongation factor EFG, domain V-like BER92_RS05150 IPR020568 Ribosomal protein S5 domain 2-type fold BER92_RS05150 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS05150 IPR009022 Elongation factor G, domain III BER92_RS05150 IPR005225 Small GTP-binding protein domain BER92_RS05150 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BER92_RS05150 IPR004540 Translation elongation factor EFG/EF2 BER92_RS05150 IPR041095 Elongation Factor G, domain II BER92_RS05155 IPR033720 Elongation factor Tu, domain 2 BER92_RS05155 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BER92_RS05155 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS05155 IPR031157 Tr-type G domain, conserved site BER92_RS05155 IPR004161 Translation elongation factor EFTu-like, domain 2 BER92_RS05155 IPR005225 Small GTP-binding protein domain BER92_RS05155 IPR000795 Transcription factor, GTP-binding domain BER92_RS05155 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain BER92_RS05155 IPR009000 Translation protein, beta-barrel domain superfamily BER92_RS05155 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BER92_RS05155 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle BER92_RS05160 IPR001848 Ribosomal protein S10 BER92_RS05160 IPR018268 Ribosomal protein S10, conserved site BER92_RS05160 IPR027486 Ribosomal protein S10 domain BER92_RS05160 IPR036838 Ribosomal protein S10 domain superfamily BER92_RS05165 IPR019927 Ribosomal protein L3, bacterial/organelle-type BER92_RS05165 IPR000597 Ribosomal protein L3 BER92_RS05165 IPR019926 Ribosomal protein L3, conserved site BER92_RS05165 IPR009000 Translation protein, beta-barrel domain superfamily BER92_RS05170 IPR013005 50S ribosomal protein uL4 BER92_RS05170 IPR002136 Ribosomal protein L4/L1e BER92_RS05170 IPR023574 Ribosomal protein L4 domain superfamily BER92_RS05175 IPR013025 Ribosomal protein L25/L23 BER92_RS05175 IPR012678 Ribosomal protein L23/L15e core domain superfamily BER92_RS05175 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BER92_RS05180 IPR012340 Nucleic acid-binding, OB-fold BER92_RS05180 IPR008991 Translation protein SH3-like domain superfamily BER92_RS05180 IPR014726 Ribosomal protein L2, domain 3 BER92_RS05180 IPR014722 Ribosomal protein L2, domain 2 BER92_RS05180 IPR002171 Ribosomal protein L2 BER92_RS05180 IPR022669 Ribosomal protein L2, C-terminal BER92_RS05180 IPR022671 Ribosomal protein L2, conserved site BER92_RS05180 IPR022666 Ribosomal Proteins L2, RNA binding domain BER92_RS05180 IPR005880 Ribosomal protein L2, bacterial/organellar-type BER92_RS05185 IPR005732 Ribosomal protein S19, bacterial-type BER92_RS05185 IPR023575 Ribosomal protein S19, superfamily BER92_RS05185 IPR020934 Ribosomal protein S19 conserved site BER92_RS05185 IPR002222 Ribosomal protein S19/S15 BER92_RS05190 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type BER92_RS05190 IPR036394 Ribosomal protein L22/L17 superfamily BER92_RS05190 IPR018260 Ribosomal protein L22/L17, conserved site BER92_RS05190 IPR001063 Ribosomal protein L22/L17 BER92_RS05195 IPR001351 Ribosomal protein S3, C-terminal BER92_RS05195 IPR018280 Ribosomal protein S3, conserved site BER92_RS05195 IPR036419 Ribosomal protein S3, C-terminal domain superfamily BER92_RS05195 IPR005704 Ribosomal protein S3, bacterial-type BER92_RS05195 IPR004087 K Homology domain BER92_RS05195 IPR009019 K homology domain superfamily, prokaryotic type BER92_RS05195 IPR015946 K homology domain-like, alpha/beta BER92_RS05195 IPR004044 K Homology domain, type 2 BER92_RS05200 IPR020798 Ribosomal protein L16, conserved site BER92_RS05200 IPR000114 Ribosomal protein L16 BER92_RS05200 IPR036920 Ribosomal protein L10e/L16 superfamily BER92_RS05200 IPR016180 Ribosomal protein L10e/L16 BER92_RS05205 IPR001854 Ribosomal protein L29/L35 BER92_RS05205 IPR036049 Ribosomal protein L29/L35 superfamily BER92_RS05210 IPR000266 Ribosomal protein S17/S11 BER92_RS05210 IPR019984 30S ribosomal protein S17 BER92_RS05210 IPR012340 Nucleic acid-binding, OB-fold BER92_RS05215 IPR000218 Ribosomal protein L14P BER92_RS05215 IPR005745 Ribosomal protein L14P, bacterial-type BER92_RS05215 IPR036853 Ribosomal protein L14 superfamily BER92_RS05215 IPR019972 Ribosomal protein L14P, conserved site BER92_RS05220 IPR008991 Translation protein SH3-like domain superfamily BER92_RS05220 IPR041988 Ribosomal Protein L26/L24, KOW domain BER92_RS05220 IPR014722 Ribosomal protein L2, domain 2 BER92_RS05220 IPR003256 Ribosomal protein L24 BER92_RS05220 IPR005824 KOW BER92_RS05225 IPR002132 Ribosomal protein L5 BER92_RS05225 IPR020930 Ribosomal protein L5, bacterial-type BER92_RS05225 IPR031310 Ribosomal protein L5, N-terminal BER92_RS05225 IPR031309 Ribosomal protein L5, C-terminal BER92_RS05225 IPR020929 Ribosomal protein L5, conserved site BER92_RS05225 IPR022803 Ribosomal protein L5 domain superfamily BER92_RS05230 IPR001209 Ribosomal protein S14 BER92_RS05230 IPR023036 Ribosomal protein S14, bacterial/plastid BER92_RS05235 IPR035987 Ribosomal protein S8 superfamily BER92_RS05235 IPR000630 Ribosomal protein S8 BER92_RS05240 IPR002358 Ribosomal protein L6, conserved site BER92_RS05240 IPR000702 Ribosomal protein L6 BER92_RS05240 IPR020040 Ribosomal protein L6, alpha-beta domain BER92_RS05240 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily BER92_RS05240 IPR019906 Ribosomal protein L6, bacterial-type BER92_RS05245 IPR005484 Ribosomal protein L18 BER92_RS05245 IPR004389 Ribosomal protein L18, bacterial-type BER92_RS05250 IPR005324 Ribosomal protein S5, C-terminal BER92_RS05250 IPR020568 Ribosomal protein S5 domain 2-type fold BER92_RS05250 IPR005712 Ribosomal protein S5, bacterial-type BER92_RS05250 IPR000851 Ribosomal protein S5 BER92_RS05250 IPR013810 Ribosomal protein S5, N-terminal BER92_RS05250 IPR018192 Ribosomal protein S5, N-terminal, conserved site BER92_RS05250 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BER92_RS05255 IPR005996 Ribosomal protein L30, bacterial-type BER92_RS05255 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily BER92_RS05255 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain BER92_RS05260 IPR021131 Ribosomal protein L18e/L15P BER92_RS05260 IPR036227 Ribosomal L18e/L15P superfamily BER92_RS05260 IPR001196 Ribosomal protein L15, conserved site BER92_RS05260 IPR005749 Ribosomal protein L15, bacterial-type BER92_RS05260 IPR030878 Ribosomal protein L15 BER92_RS05265 IPR002208 SecY/SEC61-alpha family BER92_RS05265 IPR023201 SecY domain superfamily BER92_RS05265 IPR026593 Protein translocase subunit SecY BER92_RS05265 IPR030659 SecY conserved site BER92_RS05270 IPR027437 30s ribosomal protein S13, C-terminal BER92_RS05270 IPR001892 Ribosomal protein S13 BER92_RS05270 IPR010979 Ribosomal protein S13-like, H2TH BER92_RS05270 IPR019980 Ribosomal protein S13, bacterial-type BER92_RS05270 IPR018269 Ribosomal protein S13, conserved site BER92_RS05275 IPR019981 Ribosomal protein S11, bacterial-type BER92_RS05275 IPR001971 Ribosomal protein S11 BER92_RS05275 IPR036967 Ribosomal protein S11 superfamily BER92_RS05275 IPR018102 Ribosomal S11, conserved site BER92_RS05280 IPR005709 Ribosomal protein S4, bacterial-type BER92_RS05280 IPR036986 RNA-binding S4 domain superfamily BER92_RS05280 IPR022801 Ribosomal protein S4/S9 BER92_RS05280 IPR001912 Ribosomal protein S4/S9, N-terminal BER92_RS05280 IPR018079 Ribosomal protein S4, conserved site BER92_RS05280 IPR002942 RNA-binding S4 domain BER92_RS05285 IPR036643 DNA-directed RNA polymerase, insert domain superfamily BER92_RS05285 IPR011260 RNA polymerase, alpha subunit, C-terminal BER92_RS05285 IPR036603 RNA polymerase, RBP11-like subunit BER92_RS05285 IPR011773 DNA-directed RNA polymerase, alpha subunit BER92_RS05285 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type BER92_RS05285 IPR011262 DNA-directed RNA polymerase, insert domain BER92_RS05290 IPR036373 Ribosomal protein L17 superfamily BER92_RS05290 IPR000456 Ribosomal protein L17 BER92_RS05295 IPR022920 Disulphide bond formation protein DsbB BER92_RS05295 IPR023380 DsbB-like superfamily BER92_RS05295 IPR003752 Disulphide bond formation protein DsbB/BdbC BER92_RS05315 IPR029058 Alpha/Beta hydrolase fold BER92_RS05315 IPR019826 Carboxylesterase type B, active site BER92_RS05315 IPR002018 Carboxylesterase, type B BER92_RS05340 IPR001185 Large-conductance mechanosensitive channel BER92_RS05340 IPR019823 Large-conductance mechanosensitive channel, conserved site BER92_RS05340 IPR036019 Gated mechanosensitive channel BER92_RS05340 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L BER92_RS05345 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily BER92_RS05345 IPR011234 Fumarylacetoacetase-like, C-terminal BER92_RS05355 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily BER92_RS05355 IPR006037 Regulator of K+ conductance, C-terminal BER92_RS05355 IPR031312 Sodium/sulphate symporter, conserved site BER92_RS05355 IPR004680 Citrate transporter-like domain BER92_RS05360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS05360 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type BER92_RS05365 IPR008867 Thiazole synthase BER92_RS05365 IPR013785 Aldolase-type TIM barrel BER92_RS05365 IPR033983 Thiazole synthase ThiG BER92_RS05385 IPR013762 Integrase-like, catalytic domain superfamily BER92_RS05385 IPR025166 Integrase, DNA-binding domain BER92_RS05385 IPR010998 Integrase/recombinase, N-terminal BER92_RS05385 IPR002104 Integrase, catalytic domain BER92_RS05385 IPR004107 Integrase, SAM-like, N-terminal BER92_RS05385 IPR038488 Integrase, DNA-binding domain superfamily BER92_RS05385 IPR011010 DNA breaking-rejoining enzyme, catalytic core BER92_RS05410 IPR001387 Cro/C1-type helix-turn-helix domain BER92_RS05410 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BER92_RS05430 IPR001584 Integrase, catalytic core BER92_RS05430 IPR012337 Ribonuclease H-like superfamily BER92_RS05430 IPR036397 Ribonuclease H superfamily BER92_RS05430 IPR025948 HTH-like domain BER92_RS05435 IPR002514 Transposase IS3/IS911family BER92_RS05435 IPR009057 Homeobox-like domain superfamily BER92_RS05445 IPR000014 PAS domain BER92_RS05445 IPR001633 EAL domain BER92_RS05445 IPR029787 Nucleotide cyclase BER92_RS05445 IPR013656 PAS fold-4 BER92_RS05445 IPR035965 PAS domain superfamily BER92_RS05445 IPR000160 GGDEF domain BER92_RS05445 IPR013655 PAS fold-3 BER92_RS05445 IPR000700 PAS-associated, C-terminal BER92_RS05445 IPR001610 PAC motif BER92_RS05445 IPR035919 EAL domain superfamily BER92_RS05515 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS05515 IPR003688 Type IV secretion system protein TraG/VirD4 BER92_RS05540 IPR039421 Type I protein exporter BER92_RS05540 IPR005074 Peptidase C39, bacteriocin processing BER92_RS05540 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS05540 IPR033838 Colicin V processing peptidase BER92_RS05540 IPR017871 ABC transporter, conserved site BER92_RS05540 IPR003439 ABC transporter-like BER92_RS05540 IPR036640 ABC transporter type 1, transmembrane domain superfamily BER92_RS05540 IPR003593 AAA+ ATPase domain BER92_RS05540 IPR011527 ABC transporter type 1, transmembrane domain BER92_RS05580 IPR002514 Transposase IS3/IS911family BER92_RS05580 IPR009057 Homeobox-like domain superfamily BER92_RS05610 IPR017757 Transcriptional repressor BetI BER92_RS05610 IPR039538 BetI-type transcriptional repressor, C-terminal BER92_RS05610 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BER92_RS05610 IPR009057 Homeobox-like domain superfamily BER92_RS05610 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BER92_RS05610 IPR001647 DNA-binding HTH domain, TetR-type BER92_RS05615 IPR036397 Ribonuclease H superfamily BER92_RS05615 IPR014636 RNase H, phosphoglycerate mutase domain-containing BER92_RS05615 IPR012337 Ribonuclease H-like superfamily BER92_RS05615 IPR029033 Histidine phosphatase superfamily BER92_RS05615 IPR002156 Ribonuclease H domain BER92_RS05615 IPR013078 Histidine phosphatase superfamily, clade-1 BER92_RS05620 IPR029056 Ribokinase-like BER92_RS05620 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase BER92_RS05640 IPR020904 Short-chain dehydrogenase/reductase, conserved site BER92_RS05640 IPR036291 NAD(P)-binding domain superfamily BER92_RS05640 IPR002347 Short-chain dehydrogenase/reductase SDR BER92_RS05650 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS05650 IPR023753 FAD/NAD(P)-binding domain BER92_RS05650 IPR005982 Thioredoxin reductase BER92_RS05650 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site BER92_RS05670 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BER92_RS05670 IPR006700 Ribosomal RNA small subunit methyltransferase E BER92_RS05670 IPR015947 PUA-like superfamily BER92_RS05670 IPR029028 Alpha/beta knot methyltransferases BER92_RS05675 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS05675 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BER92_RS05675 IPR005814 Aminotransferase class-III BER92_RS05675 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA BER92_RS05675 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS05680 IPR015797 NUDIX hydrolase-like domain superfamily BER92_RS05680 IPR020084 NUDIX hydrolase, conserved site BER92_RS05680 IPR000086 NUDIX hydrolase domain BER92_RS05685 IPR000760 Inositol monophosphatase-like BER92_RS05685 IPR020583 Inositol monophosphatase, metal-binding site BER92_RS05685 IPR020550 Inositol monophosphatase, conserved site BER92_RS05685 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ BER92_RS05690 IPR011551 NTP pyrophosphohydrolase MazG BER92_RS05690 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BER92_RS05695 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal BER92_RS05695 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 BER92_RS05695 IPR006223 Glycine cleavage system T protein BER92_RS05695 IPR022903 Glycine cleavage system T protein, bacteria BER92_RS05695 IPR028896 Aminomethyltransferase-like BER92_RS05695 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain BER92_RS05695 IPR006222 Aminomethyltransferase, folate-binding domain BER92_RS05700 IPR000089 Biotin/lipoyl attachment BER92_RS05700 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BER92_RS05700 IPR033753 Glycine cleavage system H-protein/Simiate BER92_RS05700 IPR017453 Glycine cleavage system H-protein, subgroup BER92_RS05700 IPR011053 Single hybrid motif BER92_RS05700 IPR002930 Glycine cleavage system H-protein BER92_RS05725 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily BER92_RS05725 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BER92_RS05725 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BER92_RS05725 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BER92_RS05725 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BER92_RS05725 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type BER92_RS05735 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BER92_RS05735 IPR009057 Homeobox-like domain superfamily BER92_RS05735 IPR001647 DNA-binding HTH domain, TetR-type BER92_RS05750 IPR008490 Transposase InsH, N-terminal BER92_RS05760 IPR002559 Transposase, IS4-like BER92_RS05770 IPR009057 Homeobox-like domain superfamily BER92_RS05770 IPR002514 Transposase IS3/IS911family BER92_RS05780 IPR016154 Heat shock protein Hsp33, C-terminal BER92_RS05780 IPR000397 Heat shock protein Hsp33 BER92_RS05780 IPR016153 Heat shock protein Hsp33, N-terminal BER92_RS05780 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily BER92_RS05785 IPR036950 Penicillin binding protein transglycosylase domain BER92_RS05785 IPR011812 Biosynthetic peptidoglycan transglycosylase BER92_RS05785 IPR001264 Glycosyl transferase, family 51 BER92_RS05785 IPR023346 Lysozyme-like domain superfamily BER92_RS05790 IPR029044 Nucleotide-diphospho-sugar transferases BER92_RS05790 IPR001173 Glycosyltransferase 2-like BER92_RS05795 IPR001093 IMP dehydrogenase/GMP reductase BER92_RS05795 IPR015875 IMP dehydrogenase / GMP reductase, conserved site BER92_RS05795 IPR005990 Inosine-5'-monophosphate dehydrogenase BER92_RS05795 IPR000644 CBS domain BER92_RS05795 IPR013785 Aldolase-type TIM barrel BER92_RS05800 IPR007844 AsmA BER92_RS05805 IPR004254 AdipoR/Haemolysin-III-related BER92_RS05805 IPR005744 Hly-III BER92_RS05810 IPR041732 Peptide chain release factor 3, GTP-binding domain BER92_RS05810 IPR009000 Translation protein, beta-barrel domain superfamily BER92_RS05810 IPR035647 EF-G domain III/V-like BER92_RS05810 IPR031157 Tr-type G domain, conserved site BER92_RS05810 IPR005225 Small GTP-binding protein domain BER92_RS05810 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily BER92_RS05810 IPR032090 Peptide chain release factor 3, C-terminal BER92_RS05810 IPR004548 Peptide chain release factor 3 BER92_RS05810 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS05810 IPR000795 Transcription factor, GTP-binding domain BER92_RS05825 IPR029058 Alpha/Beta hydrolase fold BER92_RS05825 IPR008220 Homoserine/serine acetyltransferase MetX-like BER92_RS05825 IPR000073 Alpha/beta hydrolase fold-1 BER92_RS05830 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS05830 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BER92_RS05830 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS05830 IPR011821 O-succinylhomoserine (thiol)-lyase BER92_RS05830 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BER92_RS05835 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding BER92_RS05835 IPR018042 Aspartate kinase, conserved site BER92_RS05835 IPR019811 Homoserine dehydrogenase, conserved site BER92_RS05835 IPR001048 Aspartate/glutamate/uridylate kinase BER92_RS05835 IPR036393 Acetylglutamate kinase-like superfamily BER92_RS05835 IPR001341 Aspartate kinase BER92_RS05835 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I BER92_RS05835 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain BER92_RS05835 IPR036291 NAD(P)-binding domain superfamily BER92_RS05835 IPR001342 Homoserine dehydrogenase, catalytic BER92_RS05840 IPR029058 Alpha/Beta hydrolase fold BER92_RS05840 IPR000073 Alpha/beta hydrolase fold-1 BER92_RS05840 IPR000639 Epoxide hydrolase-like BER92_RS05840 IPR017727 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, BphD BER92_RS05850 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BER92_RS05850 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS05850 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BER92_RS05850 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS05875 IPR023480 Uncharacterised protein family UPF0312/YceI BER92_RS05875 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BER92_RS05875 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BER92_RS05880 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS05880 IPR001789 Signal transduction response regulator, receiver domain BER92_RS05880 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BER92_RS05880 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS05880 IPR005467 Histidine kinase domain BER92_RS05880 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS05880 IPR036641 HPT domain superfamily BER92_RS05880 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS05880 IPR011006 CheY-like superfamily BER92_RS05880 IPR003660 HAMP domain BER92_RS05880 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS05880 IPR033414 Periplasmic sensor domain BER92_RS05895 IPR018052 Aldose 1-epimerase, conserved site BER92_RS05895 IPR015443 Aldose 1-epimerase BER92_RS05895 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase BER92_RS05895 IPR014718 Glycoside hydrolase-type carbohydrate-binding BER92_RS05895 IPR011013 Galactose mutarotase-like domain superfamily BER92_RS05900 IPR017562 Cytochrome c-type biogenesis protein CcsA BER92_RS05900 IPR002541 Cytochrome c assembly protein BER92_RS05905 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS05905 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily BER92_RS05905 IPR013822 Signal recognition particle SRP54, helical bundle BER92_RS05905 IPR004125 Signal recognition particle, SRP54 subunit, M-domain BER92_RS05905 IPR004780 Signal recognition particle protein BER92_RS05905 IPR022941 Signal recognition particle, SRP54 subunit BER92_RS05905 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain BER92_RS05905 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily BER92_RS05905 IPR003593 AAA+ ATPase domain BER92_RS05915 IPR013785 Aldolase-type TIM barrel BER92_RS05915 IPR004136 Nitronate monooxygenase BER92_RS05925 IPR000307 Ribosomal protein S16 BER92_RS05925 IPR023803 Ribosomal protein S16 domain superfamily BER92_RS05925 IPR020592 Ribosomal protein S16, conserved site BER92_RS05930 IPR011961 16S rRNA processing protein RimM BER92_RS05930 IPR002676 RimM, N-terminal BER92_RS05930 IPR011033 PRC-barrel-like superfamily BER92_RS05930 IPR009000 Translation protein, beta-barrel domain superfamily BER92_RS05930 IPR027275 PRC-barrel domain BER92_RS05930 IPR036976 RimM, N-terminal domain superfamily BER92_RS05935 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BER92_RS05935 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal BER92_RS05935 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain BER92_RS05935 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria BER92_RS05935 IPR029028 Alpha/beta knot methyltransferases BER92_RS05940 IPR008991 Translation protein SH3-like domain superfamily BER92_RS05940 IPR018257 Ribosomal protein L19, conserved site BER92_RS05940 IPR001857 Ribosomal protein L19 BER92_RS05940 IPR038657 Ribosomal protein L19 superfamily BER92_RS05945 IPR002528 Multi antimicrobial extrusion protein BER92_RS05950 IPR002942 RNA-binding S4 domain BER92_RS05950 IPR036986 RNA-binding S4 domain superfamily BER92_RS05950 IPR025708 Heat shock protein 15 BER92_RS05955 IPR008490 Transposase InsH, N-terminal BER92_RS05980 IPR000160 GGDEF domain BER92_RS05980 IPR029787 Nucleotide cyclase BER92_RS05995 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily BER92_RS05995 IPR002320 Threonine-tRNA ligase, class IIa BER92_RS05995 IPR012676 TGS-like BER92_RS05995 IPR004095 TGS BER92_RS05995 IPR012675 Beta-grasp domain superfamily BER92_RS05995 IPR036621 Anticodon-binding domain superfamily BER92_RS05995 IPR004154 Anticodon-binding BER92_RS05995 IPR012947 Threonyl/alanyl tRNA synthetase, SAD BER92_RS05995 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) BER92_RS05995 IPR033728 Threonine-tRNA ligase catalytic core domain BER92_RS05995 IPR006195 Aminoacyl-tRNA synthetase, class II BER92_RS06000 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily BER92_RS06000 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily BER92_RS06000 IPR001288 Translation initiation factor 3 BER92_RS06000 IPR019815 Translation initiation factor 3, C-terminal BER92_RS06000 IPR019813 Translation initiation factor 3, conserved site BER92_RS06000 IPR019814 Translation initiation factor 3, N-terminal BER92_RS06005 IPR018265 Ribosomal protein L35, conserved site BER92_RS06005 IPR037229 Ribosomal protein L35 superfamily BER92_RS06005 IPR021137 Ribosomal protein L35 BER92_RS06005 IPR001706 Ribosomal protein L35, non-mitochondrial BER92_RS06010 IPR035566 Ribosomal protein L20, C-terminal BER92_RS06010 IPR005813 Ribosomal protein L20 BER92_RS06015 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm BER92_RS06015 IPR002319 Phenylalanyl-tRNA synthetase BER92_RS06015 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial BER92_RS06015 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal BER92_RS06015 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit BER92_RS06015 IPR006195 Aminoacyl-tRNA synthetase, class II BER92_RS06020 IPR005146 B3/B4 tRNA-binding domain BER92_RS06020 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 BER92_RS06020 IPR009061 Putative DNA-binding domain superfamily BER92_RS06020 IPR005121 Ferrodoxin-fold anticodon-binding domain BER92_RS06020 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain BER92_RS06020 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily BER92_RS06020 IPR012340 Nucleic acid-binding, OB-fold BER92_RS06020 IPR005147 tRNA synthetase, B5-domain BER92_RS06020 IPR002547 tRNA-binding domain BER92_RS06020 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit BER92_RS06020 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain BER92_RS06025 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily BER92_RS06025 IPR000119 Histone-like DNA-binding protein BER92_RS06025 IPR020816 Histone-like DNA-binding protein, conserved site BER92_RS06025 IPR005684 Integration host factor, alpha subunit BER92_RS06030 IPR000551 MerR-type HTH domain BER92_RS06030 IPR009061 Putative DNA-binding domain superfamily BER92_RS06050 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase BER92_RS06050 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ BER92_RS06050 IPR003362 Bacterial sugar transferase BER92_RS06070 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain BER92_RS06070 IPR001296 Glycosyl transferase, family 1 BER92_RS06080 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain BER92_RS06090 IPR007345 Polysaccharide pyruvyl transferase BER92_RS06095 IPR004629 Glycosyl transferase WecB/TagA/CpsF BER92_RS06095 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase BER92_RS06105 IPR020826 Transketolase binding site BER92_RS06105 IPR005475 Transketolase-like, pyrimidine-binding domain BER92_RS06105 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BER92_RS06105 IPR033248 Transketolase, C-terminal domain BER92_RS06105 IPR029061 Thiamin diphosphate-binding fold BER92_RS06105 IPR005477 Deoxyxylulose-5-phosphate synthase BER92_RS06105 IPR005474 Transketolase, N-terminal BER92_RS06120 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily BER92_RS06120 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BER92_RS06120 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BER92_RS06120 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BER92_RS06120 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BER92_RS06120 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain BER92_RS06120 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BER92_RS06130 IPR002446 Lipocalin, bacterial BER92_RS06130 IPR012674 Calycin BER92_RS06130 IPR022272 Lipocalin family conserved site BER92_RS06130 IPR022271 Lipocalin, ApoD type BER92_RS06130 IPR000566 Lipocalin/cytosolic fatty-acid binding domain BER92_RS06145 IPR000305 GIY-YIG endonuclease BER92_RS06145 IPR035901 GIY-YIG endonuclease superfamily BER92_RS06160 IPR010251 Magnesium-protoporphyrin IX methyltransferase BER92_RS06160 IPR010940 Magnesium-protoporphyrin IX methyltransferase, C-terminal BER92_RS06160 IPR007848 Methyltransferase small domain BER92_RS06160 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS06175 IPR009057 Homeobox-like domain superfamily BER92_RS06175 IPR002514 Transposase IS3/IS911family BER92_RS06180 IPR036766 Fe(II) trafficking protein YggX superfamily BER92_RS06180 IPR007457 Fe(II) trafficking protein YggX BER92_RS06185 IPR004035 Endonuclease III, iron-sulphur binding site BER92_RS06185 IPR015797 NUDIX hydrolase-like domain superfamily BER92_RS06185 IPR029119 MutY, C-terminal BER92_RS06185 IPR011257 DNA glycosylase BER92_RS06185 IPR005760 A/G-specific adenine glycosylase MutY BER92_RS06185 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif BER92_RS06185 IPR004036 Endonuclease III-like, conserved site-2 BER92_RS06185 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal BER92_RS06185 IPR000445 Helix-hairpin-helix motif BER92_RS06185 IPR003265 HhH-GPD domain BER92_RS06190 IPR003593 AAA+ ATPase domain BER92_RS06190 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS06190 IPR013822 Signal recognition particle SRP54, helical bundle BER92_RS06190 IPR036225 SRP/SRP receptor, N-terminal BER92_RS06190 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain BER92_RS06190 IPR004390 Signal-recognition particle receptor FtsY BER92_RS06190 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily BER92_RS06200 IPR008794 Proline racemase family BER92_RS06205 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS06205 IPR006076 FAD dependent oxidoreductase BER92_RS06205 IPR012727 Glycine oxidase ThiO BER92_RS06215 IPR007419 BFD-like [2Fe-2S]-binding domain BER92_RS06215 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily BER92_RS06215 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS06215 IPR023753 FAD/NAD(P)-binding domain BER92_RS06215 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B BER92_RS06220 IPR013785 Aldolase-type TIM barrel BER92_RS06220 IPR020625 Schiff base-forming aldolase, active site BER92_RS06220 IPR020624 Schiff base-forming aldolase, conserved site BER92_RS06220 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA BER92_RS06220 IPR002220 DapA-like BER92_RS06225 IPR016161 Aldehyde/histidinol dehydrogenase BER92_RS06225 IPR016163 Aldehyde dehydrogenase, C-terminal BER92_RS06225 IPR016162 Aldehyde dehydrogenase, N-terminal BER92_RS06225 IPR015590 Aldehyde dehydrogenase domain BER92_RS06230 IPR000994 Peptidase M24 BER92_RS06230 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BER92_RS06230 IPR036005 Creatinase/aminopeptidase-like BER92_RS06230 IPR000587 Creatinase, N-terminal BER92_RS06230 IPR001714 Peptidase M24, methionine aminopeptidase BER92_RS06230 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BER92_RS06245 IPR002293 Amino acid/polyamine transporter I BER92_RS06270 IPR008490 Transposase InsH, N-terminal BER92_RS06270 IPR002559 Transposase, IS4-like BER92_RS06280 IPR000209 Peptidase S8/S53 domain BER92_RS06280 IPR036852 Peptidase S8/S53 domain superfamily BER92_RS06280 IPR023828 Peptidase S8, subtilisin, Ser-active site BER92_RS06280 IPR015366 Peptidase S53, activation domain BER92_RS06280 IPR030400 Sedolisin domain BER92_RS06290 IPR039426 Vitamin B12 transporter BtuB-like BER92_RS06290 IPR010916 TonB box, conserved site BER92_RS06290 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BER92_RS06290 IPR010917 TonB-dependent receptor, conserved site BER92_RS06290 IPR012910 TonB-dependent receptor, plug domain BER92_RS06290 IPR010101 TonB-dependent vitamin B12 transporter BtuB BER92_RS06290 IPR037066 TonB-dependent receptor, plug domain superfamily BER92_RS06290 IPR000531 TonB-dependent receptor-like, beta-barrel BER92_RS06310 IPR039426 Vitamin B12 transporter BtuB-like BER92_RS06310 IPR012910 TonB-dependent receptor, plug domain BER92_RS06310 IPR037066 TonB-dependent receptor, plug domain superfamily BER92_RS06310 IPR000531 TonB-dependent receptor-like, beta-barrel BER92_RS06310 IPR010917 TonB-dependent receptor, conserved site BER92_RS06310 IPR010916 TonB box, conserved site BER92_RS06310 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BER92_RS06310 IPR010101 TonB-dependent vitamin B12 transporter BtuB BER92_RS06330 IPR001584 Integrase, catalytic core BER92_RS06330 IPR012337 Ribonuclease H-like superfamily BER92_RS06330 IPR036397 Ribonuclease H superfamily BER92_RS06330 IPR025948 HTH-like domain BER92_RS06335 IPR009057 Homeobox-like domain superfamily BER92_RS06335 IPR002514 Transposase IS3/IS911family BER92_RS06340 IPR008490 Transposase InsH, N-terminal BER92_RS06350 IPR005265 Protoporphyrinogen oxidase HemJ-like BER92_RS06355 IPR029045 ClpP/crotonase-like domain superfamily BER92_RS06355 IPR001095 Acetyl-CoA carboxylase, alpha subunit BER92_RS06355 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal BER92_RS06360 IPR016195 Polymerase/histidinol phosphatase-like BER92_RS06360 IPR004805 DNA polymerase III, alpha subunit BER92_RS06360 IPR003141 Polymerase/histidinol phosphatase, N-terminal BER92_RS06360 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain BER92_RS06360 IPR004013 PHP domain BER92_RS06360 IPR040982 DNA polymerase III alpha subunit finger domain BER92_RS06360 IPR029460 DNA polymerase, helix-hairpin-helix motif BER92_RS06360 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BER92_RS06360 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain BER92_RS06360 IPR012340 Nucleic acid-binding, OB-fold BER92_RS06365 IPR022898 Ribonuclease HII BER92_RS06365 IPR024567 Ribonuclease HII/HIII domain BER92_RS06365 IPR001352 Ribonuclease HII/HIII BER92_RS06365 IPR012337 Ribonuclease H-like superfamily BER92_RS06365 IPR036397 Ribonuclease H superfamily BER92_RS06370 IPR003835 Glycosyl transferase, family 19 BER92_RS06375 IPR011004 Trimeric LpxA-like superfamily BER92_RS06375 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase BER92_RS06375 IPR001451 Hexapeptide repeat BER92_RS06375 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily BER92_RS06375 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal BER92_RS06380 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ BER92_RS06380 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ BER92_RS06380 IPR029069 HotDog domain superfamily BER92_RS06385 IPR001451 Hexapeptide repeat BER92_RS06385 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD BER92_RS06385 IPR011004 Trimeric LpxA-like superfamily BER92_RS06385 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region BER92_RS06395 IPR000184 Bacterial surface antigen (D15) BER92_RS06395 IPR010827 POTRA domain, BamA/TamA-like BER92_RS06395 IPR039910 Surface antigen D15-like BER92_RS06395 IPR023707 Outer membrane protein assembly factor BamA BER92_RS06395 IPR034746 POTRA domain BER92_RS06400 IPR008915 Peptidase M50 BER92_RS06400 IPR001478 PDZ domain BER92_RS06400 IPR041489 PDZ domain 6 BER92_RS06400 IPR036034 PDZ superfamily BER92_RS06400 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase BER92_RS06405 IPR036169 DXP reductoisomerase, C-terminal domain superfamily BER92_RS06405 IPR026877 DXP reductoisomerase C-terminal domain BER92_RS06405 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal BER92_RS06405 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal BER92_RS06405 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase BER92_RS06405 IPR036291 NAD(P)-binding domain superfamily BER92_RS06410 IPR000374 Phosphatidate cytidylyltransferase BER92_RS06415 IPR036424 Decaprenyl diphosphate synthase-like superfamily BER92_RS06415 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site BER92_RS06415 IPR001441 Decaprenyl diphosphate synthase-like BER92_RS06420 IPR036191 RRF superfamily BER92_RS06420 IPR023584 Ribosome recycling factor domain BER92_RS06420 IPR002661 Ribosome recycling factor BER92_RS06425 IPR001048 Aspartate/glutamate/uridylate kinase BER92_RS06425 IPR011817 Uridylate kinase BER92_RS06425 IPR036393 Acetylglutamate kinase-like superfamily BER92_RS06425 IPR015963 Uridylate kinase, bacteria BER92_RS06435 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation BER92_RS06435 IPR001816 Translation elongation factor EFTs/EF1B BER92_RS06435 IPR036402 Elongation factor Ts, dimerisation domain superfamily BER92_RS06435 IPR018101 Translation elongation factor Ts, conserved site BER92_RS06435 IPR009060 UBA-like superfamily BER92_RS06440 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily BER92_RS06440 IPR018130 Ribosomal protein S2, conserved site BER92_RS06440 IPR001865 Ribosomal protein S2 BER92_RS06440 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid BER92_RS06475 IPR001714 Peptidase M24, methionine aminopeptidase BER92_RS06475 IPR036005 Creatinase/aminopeptidase-like BER92_RS06475 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 BER92_RS06475 IPR000994 Peptidase M24 BER92_RS06480 IPR003607 HD/PDEase domain BER92_RS06480 IPR006674 HD domain BER92_RS06480 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase BER92_RS06480 IPR002934 Polymerase, nucleotidyl transferase domain BER92_RS06480 IPR002912 ACT domain BER92_RS06480 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme BER92_RS06485 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 BER92_RS06485 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily BER92_RS06485 IPR011004 Trimeric LpxA-like superfamily BER92_RS06485 IPR001451 Hexapeptide repeat BER92_RS06485 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family BER92_RS06490 IPR006504 Transcriptional regulator Spx/MgsR BER92_RS06490 IPR006660 Arsenate reductase-like BER92_RS06490 IPR036249 Thioredoxin-like superfamily BER92_RS06495 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site BER92_RS06495 IPR036264 Bacterial exopeptidase dimerisation domain BER92_RS06495 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria BER92_RS06495 IPR002933 Peptidase M20 BER92_RS06495 IPR011650 Peptidase M20, dimerisation domain BER92_RS06500 IPR029055 Nucleophile aminohydrolases, N-terminal BER92_RS06500 IPR017932 Glutamine amidotransferase type 2 domain BER92_RS06500 IPR033738 Asparagine synthase, N-terminal domain BER92_RS06500 IPR001962 Asparagine synthase BER92_RS06500 IPR006426 Asparagine synthase, glutamine-hydrolyzing BER92_RS06500 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS06510 IPR000531 TonB-dependent receptor-like, beta-barrel BER92_RS06510 IPR039423 TonB-dependent receptor-like BER92_RS06510 IPR010105 TonB-dependent siderophore receptor BER92_RS06510 IPR012910 TonB-dependent receptor, plug domain BER92_RS06510 IPR030148 Catecholate siderophore receptor Fiu BER92_RS06510 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BER92_RS06510 IPR037066 TonB-dependent receptor, plug domain superfamily BER92_RS06515 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase BER92_RS06515 IPR014395 Penicillin/GL-7-ACA/AHL acylase BER92_RS06515 IPR029055 Nucleophile aminohydrolases, N-terminal BER92_RS06515 IPR023343 Penicillin amidase type, domain 1 BER92_RS06525 IPR002024 Bacterioferritin BER92_RS06525 IPR009040 Ferritin-like diiron domain BER92_RS06525 IPR009078 Ferritin-like superfamily BER92_RS06525 IPR008331 Ferritin/DPS protein domain BER92_RS06525 IPR012347 Ferritin-like BER92_RS06530 IPR008854 TPMT family BER92_RS06530 IPR025835 Thiopurine S-methyltransferase BER92_RS06530 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS06530 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification BER92_RS06535 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal BER92_RS06535 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta BER92_RS06535 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily BER92_RS06535 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BER92_RS06535 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat BER92_RS06535 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative BER92_RS06535 IPR013760 DNA topoisomerase, type IIA-like domain superfamily BER92_RS06545 IPR010131 RND efflux system, outer membrane lipoprotein, NodT BER92_RS06545 IPR003423 Outer membrane efflux protein BER92_RS06550 IPR005694 Efflux pump membrane protein BER92_RS06550 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BER92_RS06555 IPR020846 Major facilitator superfamily domain BER92_RS06555 IPR011701 Major facilitator superfamily BER92_RS06555 IPR036259 MFS transporter superfamily BER92_RS06555 IPR004638 Drug resistance transporter EmrB-like BER92_RS06575 IPR005279 Dipeptide/tripeptide permease BER92_RS06575 IPR020846 Major facilitator superfamily domain BER92_RS06575 IPR036259 MFS transporter superfamily BER92_RS06575 IPR000109 Proton-dependent oligopeptide transporter family BER92_RS06575 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site BER92_RS06610 IPR029760 Glutathione peroxidase conserved site BER92_RS06610 IPR029759 Glutathione peroxidase active site BER92_RS06610 IPR036249 Thioredoxin-like superfamily BER92_RS06610 IPR000889 Glutathione peroxidase BER92_RS06620 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BER92_RS06620 IPR001433 Oxidoreductase FAD/NAD(P)-binding BER92_RS06620 IPR017938 Riboflavin synthase-like beta-barrel BER92_RS06620 IPR017927 FAD-binding domain, ferredoxin reductase-type BER92_RS06620 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BER92_RS06620 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain BER92_RS06620 IPR033892 Ferredoxin--NADP reductase, bacteria BER92_RS06625 IPR036640 ABC transporter type 1, transmembrane domain superfamily BER92_RS06625 IPR003439 ABC transporter-like BER92_RS06625 IPR003593 AAA+ ATPase domain BER92_RS06625 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS06625 IPR011527 ABC transporter type 1, transmembrane domain BER92_RS06625 IPR017871 ABC transporter, conserved site BER92_RS06625 IPR039421 Type I protein exporter BER92_RS06630 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain BER92_RS06630 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain BER92_RS06630 IPR020557 Fumarate lyase, conserved site BER92_RS06630 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily BER92_RS06630 IPR011167 Iron-dependent fumarate hydratase BER92_RS06635 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site BER92_RS06635 IPR001765 Carbonic anhydrase BER92_RS06635 IPR036874 Carbonic anhydrase superfamily BER92_RS06655 IPR012156 Cold shock, CspA BER92_RS06655 IPR011129 Cold shock domain BER92_RS06655 IPR019844 Cold-shock (CSD) domain BER92_RS06655 IPR012340 Nucleic acid-binding, OB-fold BER92_RS06655 IPR002059 Cold-shock protein, DNA-binding BER92_RS06670 IPR035985 Ubiquitin-activating enzyme BER92_RS06670 IPR000594 THIF-type NAD/FAD binding fold BER92_RS06675 IPR032466 Metal-dependent hydrolase BER92_RS06675 IPR001130 TatD family BER92_RS06675 IPR015991 Uncharacterised hydrolase TatD-type BER92_RS06675 IPR018228 Deoxyribonuclease, TatD-related, conserved site BER92_RS06695 IPR010987 Glutathione S-transferase, C-terminal-like BER92_RS06695 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BER92_RS06695 IPR004045 Glutathione S-transferase, N-terminal BER92_RS06695 IPR004046 Glutathione S-transferase, C-terminal BER92_RS06695 IPR036249 Thioredoxin-like superfamily BER92_RS06700 IPR001962 Asparagine synthase BER92_RS06700 IPR033738 Asparagine synthase, N-terminal domain BER92_RS06700 IPR017932 Glutamine amidotransferase type 2 domain BER92_RS06700 IPR006426 Asparagine synthase, glutamine-hydrolyzing BER92_RS06700 IPR029055 Nucleophile aminohydrolases, N-terminal BER92_RS06705 IPR029039 Flavoprotein-like superfamily BER92_RS06705 IPR005025 NADPH-dependent FMN reductase-like BER92_RS06710 IPR007692 DNA helicase, DnaB type BER92_RS06710 IPR007694 DNA helicase, DnaB-like, C-terminal BER92_RS06710 IPR003593 AAA+ ATPase domain BER92_RS06710 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS06710 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily BER92_RS06710 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BER92_RS06710 IPR007693 DNA helicase, DnaB-like, N-terminal BER92_RS06715 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS06715 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal BER92_RS06715 IPR002081 Cryptochrome/DNA photolyase class 1 BER92_RS06715 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily BER92_RS06715 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily BER92_RS06715 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain BER92_RS06715 IPR006050 DNA photolyase, N-terminal BER92_RS06720 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel BER92_RS06720 IPR028974 TSP type-3 repeat BER92_RS06720 IPR006664 Outer membrane protein, bacterial BER92_RS06720 IPR036737 OmpA-like domain superfamily BER92_RS06720 IPR008722 Outer membrane porin F, N-terminal BER92_RS06720 IPR006690 Outer membrane protein, OmpA-like, conserved site BER92_RS06720 IPR006665 OmpA-like domain BER92_RS06730 IPR036397 Ribonuclease H superfamily BER92_RS06730 IPR012337 Ribonuclease H-like superfamily BER92_RS06730 IPR001584 Integrase, catalytic core BER92_RS06730 IPR025948 HTH-like domain BER92_RS06735 IPR002514 Transposase IS3/IS911family BER92_RS06735 IPR009057 Homeobox-like domain superfamily BER92_RS06755 IPR018653 Domain of unknown function DUF2083,transcriptional regulator BER92_RS06755 IPR026281 HTH-type transcriptional regulator RamB BER92_RS06755 IPR010359 IrrE N-terminal-like domain BER92_RS06755 IPR001387 Cro/C1-type helix-turn-helix domain BER92_RS06755 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BER92_RS06760 IPR016162 Aldehyde dehydrogenase, N-terminal BER92_RS06760 IPR015590 Aldehyde dehydrogenase domain BER92_RS06760 IPR010061 Methylmalonate-semialdehyde dehydrogenase BER92_RS06760 IPR016161 Aldehyde/histidinol dehydrogenase BER92_RS06760 IPR016163 Aldehyde dehydrogenase, C-terminal BER92_RS06760 IPR016160 Aldehyde dehydrogenase, cysteine active site BER92_RS06765 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BER92_RS06765 IPR006089 Acyl-CoA dehydrogenase, conserved site BER92_RS06765 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BER92_RS06765 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BER92_RS06765 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BER92_RS06765 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily BER92_RS06765 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BER92_RS06770 IPR029045 ClpP/crotonase-like domain superfamily BER92_RS06770 IPR014748 Enoyl-CoA hydratase, C-terminal BER92_RS06770 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BER92_RS06770 IPR001753 Enoyl-CoA hydratase/isomerase BER92_RS06775 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal BER92_RS06775 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BER92_RS06775 IPR001753 Enoyl-CoA hydratase/isomerase BER92_RS06775 IPR012802 Fatty oxidation complex, alpha subunit FadJ BER92_RS06775 IPR036291 NAD(P)-binding domain superfamily BER92_RS06775 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site BER92_RS06775 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding BER92_RS06775 IPR029045 ClpP/crotonase-like domain superfamily BER92_RS06775 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BER92_RS06780 IPR011548 3-hydroxyisobutyrate dehydrogenase BER92_RS06780 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site BER92_RS06780 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding BER92_RS06780 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BER92_RS06780 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BER92_RS06780 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain BER92_RS06780 IPR015815 3-hydroxyisobutyrate dehydrogenase-related BER92_RS06780 IPR036291 NAD(P)-binding domain superfamily BER92_RS06785 IPR002524 Cation efflux protein BER92_RS06785 IPR027469 Cation efflux transmembrane domain superfamily BER92_RS06785 IPR036837 Cation efflux protein, cytoplasmic domain superfamily BER92_RS06790 IPR029045 ClpP/crotonase-like domain superfamily BER92_RS06790 IPR001753 Enoyl-CoA hydratase/isomerase BER92_RS06790 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BER92_RS06790 IPR012802 Fatty oxidation complex, alpha subunit FadJ BER92_RS06790 IPR036291 NAD(P)-binding domain superfamily BER92_RS06790 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding BER92_RS06790 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal BER92_RS06795 IPR013325 RNA polymerase sigma factor, region 2 BER92_RS06795 IPR013324 RNA polymerase sigma factor, region 3/4-like BER92_RS06795 IPR014286 RNA polymerase sigma-70 RpoE type BER92_RS06795 IPR007627 RNA polymerase sigma-70 region 2 BER92_RS06795 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BER92_RS06795 IPR014284 RNA polymerase sigma-70 like domain BER92_RS06795 IPR039425 RNA polymerase sigma-70 like BER92_RS06795 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS06795 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BER92_RS06805 IPR001478 PDZ domain BER92_RS06805 IPR036034 PDZ superfamily BER92_RS06805 IPR011782 Peptidase S1C, Do BER92_RS06805 IPR009003 Peptidase S1, PA clan BER92_RS06805 IPR001940 Peptidase S1C BER92_RS06810 IPR008490 Transposase InsH, N-terminal BER92_RS06815 IPR008490 Transposase InsH, N-terminal BER92_RS06815 IPR002559 Transposase, IS4-like BER92_RS06825 IPR002514 Transposase IS3/IS911family BER92_RS06825 IPR009057 Homeobox-like domain superfamily BER92_RS06830 IPR025948 HTH-like domain BER92_RS06830 IPR001584 Integrase, catalytic core BER92_RS06830 IPR036397 Ribonuclease H superfamily BER92_RS06830 IPR012337 Ribonuclease H-like superfamily BER92_RS06850 IPR016169 FAD-binding, type PCMH, subdomain 2 BER92_RS06850 IPR000644 CBS domain BER92_RS06850 IPR036318 FAD-binding, type PCMH-like superfamily BER92_RS06850 IPR005170 Transporter-associated domain BER92_RS06860 IPR023091 Metalloprotease catalytic domain superfamily, predicted BER92_RS06860 IPR002036 Endoribonuclease YbeY BER92_RS06860 IPR020549 Endoribonuclease YbeY, conserved site BER92_RS06865 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS06865 IPR003714 PhoH-like protein BER92_RS06870 IPR005839 Methylthiotransferase BER92_RS06870 IPR013848 Methylthiotransferase, N-terminal BER92_RS06870 IPR023404 Radical SAM, alpha/beta horseshoe BER92_RS06870 IPR038135 Methylthiotransferase, N-terminal domain superfamily BER92_RS06870 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB BER92_RS06870 IPR007197 Radical SAM BER92_RS06870 IPR020612 Methylthiotransferase, conserved site BER92_RS06870 IPR002792 TRAM domain BER92_RS06870 IPR006638 Elp3/MiaB/NifB BER92_RS06875 IPR023346 Lysozyme-like domain superfamily BER92_RS06875 IPR000189 Prokaryotic transglycosylase, active site BER92_RS06875 IPR008258 Transglycosylase SLT domain 1 BER92_RS06880 IPR005805 Rieske iron-sulphur protein, C-terminal BER92_RS06880 IPR014349 Rieske iron-sulphur protein BER92_RS06880 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily BER92_RS06880 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal BER92_RS06880 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit BER92_RS06880 IPR017941 Rieske [2Fe-2S] iron-sulphur domain BER92_RS06885 IPR027387 Cytochrome b/b6-like domain superfamily BER92_RS06885 IPR005797 Cytochrome b/b6, N-terminal BER92_RS06885 IPR036150 Cytochrome b/b6, C-terminal domain superfamily BER92_RS06885 IPR005798 Cytochrome b/b6, C-terminal BER92_RS06885 IPR030689 Cytochrome b BER92_RS06885 IPR016174 Di-haem cytochrome, transmembrane BER92_RS06890 IPR036909 Cytochrome c-like domain superfamily BER92_RS06890 IPR002326 Cytochrome c1 BER92_RS06890 IPR009056 Cytochrome c-like domain BER92_RS06895 IPR034341 Stringent starvation protein A, N-terminal BER92_RS06895 IPR004046 Glutathione S-transferase, C-terminal BER92_RS06895 IPR004045 Glutathione S-transferase, N-terminal BER92_RS06895 IPR040079 Glutathione Transferase family BER92_RS06895 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BER92_RS06895 IPR010987 Glutathione S-transferase, C-terminal-like BER92_RS06895 IPR036249 Thioredoxin-like superfamily BER92_RS06900 IPR036760 SspB-like superfamily BER92_RS06900 IPR007481 Stringent starvation protein B BER92_RS06910 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS06910 IPR003593 AAA+ ATPase domain BER92_RS06910 IPR014001 Helicase superfamily 1/2, ATP-binding domain BER92_RS06910 IPR011545 DEAD/DEAH box helicase domain BER92_RS06910 IPR013701 DEAD/H associated BER92_RS06910 IPR001650 Helicase, C-terminal BER92_RS06915 IPR003180 Methylpurine-DNA glycosylase BER92_RS06915 IPR036995 Methylpurine-DNA glycosylase superfamily BER92_RS06915 IPR011034 Formyl transferase-like, C-terminal domain superfamily BER92_RS06940 IPR012337 Ribonuclease H-like superfamily BER92_RS06940 IPR006292 Ribonuclease D BER92_RS06940 IPR036397 Ribonuclease H superfamily BER92_RS06940 IPR002562 3'-5' exonuclease domain BER92_RS06940 IPR010997 HRDC-like superfamily BER92_RS06940 IPR002121 HRDC domain BER92_RS06945 IPR042095 Sulfatase-modifying factor enzyme superfamily BER92_RS06945 IPR005532 Sulfatase-modifying factor enzyme BER92_RS06945 IPR016187 C-type lectin fold BER92_RS06960 IPR009000 Translation protein, beta-barrel domain superfamily BER92_RS06960 IPR013842 GTP-binding protein LepA, C-terminal BER92_RS06960 IPR035654 Elongation factor 4, domain IV BER92_RS06960 IPR005225 Small GTP-binding protein domain BER92_RS06960 IPR031157 Tr-type G domain, conserved site BER92_RS06960 IPR004161 Translation elongation factor EFTu-like, domain 2 BER92_RS06960 IPR000640 Elongation factor EFG, domain V-like BER92_RS06960 IPR035647 EF-G domain III/V-like BER92_RS06960 IPR038363 LepA, C-terminal domain superfamily BER92_RS06960 IPR000795 Transcription factor, GTP-binding domain BER92_RS06960 IPR006297 Elongation factor 4 BER92_RS06960 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS06965 IPR019756 Peptidase S26A, signal peptidase I, serine active site BER92_RS06965 IPR019757 Peptidase S26A, signal peptidase I, lysine active site BER92_RS06965 IPR000223 Peptidase S26A, signal peptidase I BER92_RS06965 IPR019758 Peptidase S26A, signal peptidase I, conserved site BER92_RS06965 IPR019533 Peptidase S26 BER92_RS06965 IPR036286 LexA/Signal peptidase-like superfamily BER92_RS06975 IPR011907 Ribonuclease III BER92_RS06975 IPR000999 Ribonuclease III domain BER92_RS06975 IPR036389 Ribonuclease III, endonuclease domain superfamily BER92_RS06975 IPR014720 Double-stranded RNA-binding domain BER92_RS06980 IPR004044 K Homology domain, type 2 BER92_RS06980 IPR009019 K homology domain superfamily, prokaryotic type BER92_RS06980 IPR005662 GTP-binding protein Era BER92_RS06980 IPR005225 Small GTP-binding protein domain BER92_RS06980 IPR030388 Era-type guanine nucleotide-binding (G) domain BER92_RS06980 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS06980 IPR006073 GTP binding domain BER92_RS06980 IPR015946 K homology domain-like, alpha/beta BER92_RS06985 IPR003717 Recombination protein O, RecO BER92_RS06985 IPR022572 DNA replication/recombination mediator RecO, N-terminal BER92_RS06985 IPR012340 Nucleic acid-binding, OB-fold BER92_RS06985 IPR037278 ARFGAP/RecO-like zinc finger BER92_RS06995 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD BER92_RS06995 IPR030390 RNA methyltransferase TrmA, active site BER92_RS06995 IPR030391 RNA methyltransferase TrmA, conserved site BER92_RS06995 IPR012340 Nucleic acid-binding, OB-fold BER92_RS06995 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS06995 IPR010280 (Uracil-5)-methyltransferase family BER92_RS06995 IPR002792 TRAM domain BER92_RS07000 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like BER92_RS07000 IPR023577 CYTH domain BER92_RS07000 IPR033469 CYTH-like domain superfamily BER92_RS07005 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS07005 IPR002937 Amine oxidase BER92_RS07005 IPR034721 Bacterial renalase BER92_RS07010 IPR007357 Deoxyribodipyrimidine photolyase-related protein BER92_RS07010 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS07010 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily BER92_RS07015 IPR022956 Beta-hexosaminidase, bacterial BER92_RS07015 IPR019800 Glycoside hydrolase, family 3, active site BER92_RS07015 IPR001764 Glycoside hydrolase, family 3, N-terminal BER92_RS07015 IPR017853 Glycoside hydrolase superfamily BER92_RS07015 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily BER92_RS07020 IPR005904 Hypoxanthine phosphoribosyl transferase BER92_RS07020 IPR000836 Phosphoribosyltransferase domain BER92_RS07020 IPR029057 Phosphoribosyltransferase-like BER92_RS07025 IPR010044 Methylthioadenosine phosphorylase (MTAP) BER92_RS07025 IPR035994 Nucleoside phosphorylase superfamily BER92_RS07025 IPR018099 Purine phosphorylase, family 2, conserved site BER92_RS07025 IPR000845 Nucleoside phosphorylase domain BER92_RS07030 IPR012156 Cold shock, CspA BER92_RS07030 IPR011129 Cold shock domain BER92_RS07030 IPR019844 Cold-shock (CSD) domain BER92_RS07030 IPR002059 Cold-shock protein, DNA-binding BER92_RS07030 IPR012340 Nucleic acid-binding, OB-fold BER92_RS07040 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS07040 IPR013701 DEAD/H associated BER92_RS07040 IPR003593 AAA+ ATPase domain BER92_RS07040 IPR001650 Helicase, C-terminal BER92_RS07040 IPR014001 Helicase superfamily 1/2, ATP-binding domain BER92_RS07040 IPR011545 DEAD/DEAH box helicase domain BER92_RS07045 IPR000977 DNA ligase, ATP-dependent BER92_RS07045 IPR012340 Nucleic acid-binding, OB-fold BER92_RS07045 IPR012308 DNA ligase, ATP-dependent, N-terminal BER92_RS07045 IPR016059 DNA ligase, ATP-dependent, conserved site BER92_RS07045 IPR012310 DNA ligase, ATP-dependent, central BER92_RS07045 IPR012309 DNA ligase, ATP-dependent, C-terminal BER92_RS07045 IPR022865 DNA ligase, ATP-dependent, bacterial/archaeal BER92_RS07045 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily BER92_RS07055 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BER92_RS07055 IPR000977 DNA ligase, ATP-dependent BER92_RS07055 IPR012309 DNA ligase, ATP-dependent, C-terminal BER92_RS07055 IPR012310 DNA ligase, ATP-dependent, central BER92_RS07055 IPR016059 DNA ligase, ATP-dependent, conserved site BER92_RS07055 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily BER92_RS07055 IPR012340 Nucleic acid-binding, OB-fold BER92_RS07055 IPR012308 DNA ligase, ATP-dependent, N-terminal BER92_RS07085 IPR020616 Thiolase, N-terminal BER92_RS07085 IPR020613 Thiolase, conserved site BER92_RS07085 IPR020617 Thiolase, C-terminal BER92_RS07085 IPR016039 Thiolase-like BER92_RS07085 IPR020610 Thiolase, active site BER92_RS07085 IPR020615 Thiolase, acyl-enzyme intermediate active site BER92_RS07085 IPR002155 Thiolase BER92_RS07090 IPR002559 Transposase, IS4-like BER92_RS07090 IPR008490 Transposase InsH, N-terminal BER92_RS07095 IPR033524 Leu/Phe/Val dehydrogenases active site BER92_RS07095 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal BER92_RS07095 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain BER92_RS07095 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal BER92_RS07095 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase BER92_RS07095 IPR036291 NAD(P)-binding domain superfamily BER92_RS07105 IPR002725 Protein of unknown function DUF45 BER92_RS07115 IPR009760 Protein of unknown function DUF1328 BER92_RS07125 IPR033186 Helicase HerA-like C-terminal BER92_RS07125 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS07135 IPR020011 Motility protein FimV, C-terminal BER92_RS07135 IPR020012 Motility protein FimV, N-terminal BER92_RS07135 IPR020012 Motility protein FimV, N-terminal BER92_RS07135 IPR020011 Motility protein FimV, C-terminal BER92_RS07135 IPR036779 LysM domain superfamily BER92_RS07135 IPR018392 LysM domain BER92_RS07135 IPR038440 FimV, C-terminal domain superfamily BER92_RS07135 IPR011990 Tetratricopeptide-like helical domain superfamily BER92_RS07135 IPR038440 FimV, C-terminal domain superfamily BER92_RS07135 IPR018392 LysM domain BER92_RS07135 IPR036779 LysM domain superfamily BER92_RS07135 IPR011990 Tetratricopeptide-like helical domain superfamily BER92_RS07145 IPR020103 Pseudouridine synthase, catalytic domain superfamily BER92_RS07145 IPR001406 Pseudouridine synthase I, TruA BER92_RS07145 IPR020095 Pseudouridine synthase I, TruA, C-terminal BER92_RS07145 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain BER92_RS07150 IPR013785 Aldolase-type TIM barrel BER92_RS07150 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) BER92_RS07150 IPR011060 Ribulose-phosphate binding barrel BER92_RS07155 IPR025161 Putative transposase IS4/IS5 family BER92_RS07160 IPR008490 Transposase InsH, N-terminal BER92_RS07160 IPR002559 Transposase, IS4-like BER92_RS07170 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS07170 IPR000847 Transcription regulator HTH, LysR BER92_RS07170 IPR005119 LysR, substrate-binding BER92_RS07170 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS07170 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 BER92_RS07175 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BER92_RS07175 IPR023026 Tryptophan synthase beta chain/beta chain-like BER92_RS07175 IPR006654 Tryptophan synthase, beta chain BER92_RS07175 IPR006653 Tryptophan synthase, beta chain, conserved site BER92_RS07175 IPR001926 Pyridoxal-phosphate dependent enzyme BER92_RS07180 IPR011060 Ribulose-phosphate binding barrel BER92_RS07180 IPR013785 Aldolase-type TIM barrel BER92_RS07180 IPR018204 Tryptophan synthase, alpha chain, active site BER92_RS07180 IPR002028 Tryptophan synthase, alpha chain BER92_RS07185 IPR041010 Acetyl-coA carboxylase zinc finger domain BER92_RS07185 IPR029045 ClpP/crotonase-like domain superfamily BER92_RS07185 IPR034733 Acetyl-CoA carboxylase BER92_RS07185 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit BER92_RS07185 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal BER92_RS07190 IPR016066 Alpha-D-phosphohexomutase, conserved site BER92_RS07190 IPR006352 Phosphoglucosamine mutase, bacterial type BER92_RS07190 IPR005841 Alpha-D-phosphohexomutase superfamily BER92_RS07190 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily BER92_RS07190 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III BER92_RS07190 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II BER92_RS07190 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III BER92_RS07190 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I BER92_RS07190 IPR005843 Alpha-D-phosphohexomutase, C-terminal BER92_RS07205 IPR001633 EAL domain BER92_RS07205 IPR035919 EAL domain superfamily BER92_RS07205 IPR000160 GGDEF domain BER92_RS07205 IPR005330 MHYT domain BER92_RS07205 IPR029787 Nucleotide cyclase BER92_RS07220 IPR020904 Short-chain dehydrogenase/reductase, conserved site BER92_RS07220 IPR036291 NAD(P)-binding domain superfamily BER92_RS07220 IPR002347 Short-chain dehydrogenase/reductase SDR BER92_RS07225 IPR020861 Triosephosphate isomerase, active site BER92_RS07225 IPR000652 Triosephosphate isomerase BER92_RS07225 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic BER92_RS07225 IPR035990 Triosephosphate isomerase superfamily BER92_RS07225 IPR013785 Aldolase-type TIM barrel BER92_RS07240 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily BER92_RS07240 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 BER92_RS07240 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid BER92_RS07245 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit BER92_RS07245 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit BER92_RS07250 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily BER92_RS07250 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit BER92_RS07250 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site BER92_RS07250 IPR010218 NADH dehydrogenase, subunit C BER92_RS07255 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site BER92_RS07255 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H BER92_RS07255 IPR029014 [NiFe]-hydrogenase, large subunit BER92_RS07255 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily BER92_RS07255 IPR001135 NADH-quinone oxidoreductase, subunit D BER92_RS07260 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal BER92_RS07260 IPR042128 NuoE domain BER92_RS07260 IPR002023 NADH-quinone oxidoreductase subunit E-like BER92_RS07260 IPR036249 Thioredoxin-like superfamily BER92_RS07265 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily BER92_RS07265 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain BER92_RS07265 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily BER92_RS07265 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain BER92_RS07265 IPR011537 NADH ubiquinone oxidoreductase, F subunit BER92_RS07265 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site BER92_RS07265 IPR019554 Soluble ligand binding domain BER92_RS07270 IPR036010 2Fe-2S ferredoxin-like superfamily BER92_RS07270 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding BER92_RS07270 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BER92_RS07270 IPR006656 Molybdopterin oxidoreductase BER92_RS07270 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain BER92_RS07270 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site BER92_RS07270 IPR010228 NADH:ubiquinone oxidoreductase, subunit G BER92_RS07270 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal BER92_RS07275 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site BER92_RS07275 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H BER92_RS07280 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BER92_RS07280 IPR010226 NADH-quinone oxidoreductase, chain I BER92_RS07280 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BER92_RS07285 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ BER92_RS07285 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 BER92_RS07290 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K BER92_RS07290 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like BER92_RS07295 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal BER92_RS07295 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup BER92_RS07295 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 BER92_RS07295 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BER92_RS07300 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BER92_RS07300 IPR010227 NADH-quinone oxidoreductase, chain M/4 BER92_RS07300 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal BER92_RS07300 IPR003918 NADH:ubiquinone oxidoreductase BER92_RS07305 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 BER92_RS07305 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BER92_RS07315 IPR035956 RimP, N-terminal domain superfamily BER92_RS07315 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily BER92_RS07315 IPR028989 Ribosome maturation factor RimP, N-terminal BER92_RS07315 IPR003728 Ribosome maturation factor RimP BER92_RS07315 IPR028998 Ribosome maturation factor RimP, C-terminal BER92_RS07320 IPR009019 K homology domain superfamily, prokaryotic type BER92_RS07320 IPR010213 Transcription termination factor NusA BER92_RS07320 IPR010214 Transcription termination factor NusA, C-terminal duplication BER92_RS07320 IPR012340 Nucleic acid-binding, OB-fold BER92_RS07320 IPR013735 Transcription factor NusA, N-terminal BER92_RS07320 IPR003029 S1 domain BER92_RS07320 IPR030842 Transcription termination/antitermination protein NusA, bacterial BER92_RS07320 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical BER92_RS07320 IPR036555 NusA, N-terminal domain superfamily BER92_RS07320 IPR025249 KH domain, NusA-like BER92_RS07320 IPR015946 K homology domain-like, alpha/beta BER92_RS07320 IPR022967 RNA-binding domain, S1 BER92_RS07325 IPR009061 Putative DNA-binding domain superfamily BER92_RS07325 IPR013575 Initiation factor 2 associated domain, bacterial BER92_RS07325 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS07325 IPR006847 Translation initiation factor IF-2, N-terminal BER92_RS07325 IPR000795 Transcription factor, GTP-binding domain BER92_RS07325 IPR015760 Translation initiation factor IF- 2 BER92_RS07325 IPR023115 Translation initiation factor IF- 2, domain 3 BER92_RS07325 IPR036925 Translation initiation factor IF-2, domain 3 superfamily BER92_RS07325 IPR009000 Translation protein, beta-barrel domain superfamily BER92_RS07325 IPR005225 Small GTP-binding protein domain BER92_RS07325 IPR000178 Translation initiation factor aIF-2, bacterial-like BER92_RS07330 IPR023799 Ribosome-binding factor A domain superfamily BER92_RS07330 IPR000238 Ribosome-binding factor A BER92_RS07330 IPR015946 K homology domain-like, alpha/beta BER92_RS07330 IPR020053 Ribosome-binding factor A, conserved site BER92_RS07335 IPR020103 Pseudouridine synthase, catalytic domain superfamily BER92_RS07335 IPR002501 Pseudouridine synthase II, N-terminal BER92_RS07335 IPR015947 PUA-like superfamily BER92_RS07335 IPR014780 tRNA pseudouridine synthase II, TruB BER92_RS07335 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal BER92_RS07335 IPR032819 tRNA pseudouridylate synthase B, C-terminal BER92_RS07340 IPR009068 S15/NS1, RNA-binding BER92_RS07340 IPR005290 Ribosomal protein S15, bacterial-type BER92_RS07340 IPR000589 Ribosomal protein S15 BER92_RS07345 IPR012340 Nucleic acid-binding, OB-fold BER92_RS07345 IPR015847 Exoribonuclease, phosphorolytic domain 2 BER92_RS07345 IPR036345 Exoribonuclease, PH domain 2 superfamily BER92_RS07345 IPR004087 K Homology domain BER92_RS07345 IPR004088 K Homology domain, type 1 BER92_RS07345 IPR036612 K Homology domain, type 1 superfamily BER92_RS07345 IPR012162 Polyribonucleotide nucleotidyltransferase BER92_RS07345 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily BER92_RS07345 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain BER92_RS07345 IPR001247 Exoribonuclease, phosphorolytic domain 1 BER92_RS07345 IPR020568 Ribosomal protein S5 domain 2-type fold BER92_RS07345 IPR022967 RNA-binding domain, S1 BER92_RS07345 IPR003029 S1 domain BER92_RS07345 IPR027408 PNPase/RNase PH domain superfamily BER92_RS07350 IPR025161 Putative transposase IS4/IS5 family BER92_RS07355 IPR002559 Transposase, IS4-like BER92_RS07365 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD BER92_RS07365 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal BER92_RS07365 IPR004393 Nicotinate-nucleotide pyrophosphorylase BER92_RS07365 IPR013785 Aldolase-type TIM barrel BER92_RS07365 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal BER92_RS07365 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal BER92_RS07365 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily BER92_RS07375 IPR000031 PurE domain BER92_RS07375 IPR024694 PurE, prokaryotic type BER92_RS07375 IPR035893 PurE domain superfamily BER92_RS07375 IPR033747 Class I PurE BER92_RS07380 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BER92_RS07380 IPR011761 ATP-grasp fold BER92_RS07380 IPR011054 Rudiment single hybrid motif BER92_RS07380 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain BER92_RS07380 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit BER92_RS07380 IPR016185 Pre-ATP-grasp domain superfamily BER92_RS07380 IPR013815 ATP-grasp fold, subdomain 1 BER92_RS07385 IPR019832 Manganese/iron superoxide dismutase, C-terminal BER92_RS07385 IPR019831 Manganese/iron superoxide dismutase, N-terminal BER92_RS07385 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily BER92_RS07385 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily BER92_RS07385 IPR019833 Manganese/iron superoxide dismutase, binding site BER92_RS07385 IPR001189 Manganese/iron superoxide dismutase BER92_RS07390 IPR036249 Thioredoxin-like superfamily BER92_RS07390 IPR004480 Monothiol glutaredoxin-related BER92_RS07390 IPR002109 Glutaredoxin BER92_RS07390 IPR033658 Glutaredoxin, PICOT-like BER92_RS07390 IPR014434 Monothiol glutaredoxin BER92_RS07400 IPR002771 Multiple antibiotic resistance (MarC)-related BER92_RS07405 IPR000531 TonB-dependent receptor-like, beta-barrel BER92_RS07405 IPR013784 Carbohydrate-binding-like fold BER92_RS07405 IPR039426 Vitamin B12 transporter BtuB-like BER92_RS07410 IPR031100 LOG family BER92_RS07410 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily BER92_RS07410 IPR021826 Domain of unknown function DUF3412 BER92_RS07410 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal BER92_RS07420 IPR010559 Signal transduction histidine kinase, internal region BER92_RS07420 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS07420 IPR003018 GAF domain BER92_RS07420 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region BER92_RS07425 IPR012902 Prokaryotic N-terminal methylation site BER92_RS07425 IPR001082 Fimbrial protein pilin BER92_RS07435 IPR008707 PilC beta-propeller domain BER92_RS07435 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BER92_RS07440 IPR008490 Transposase InsH, N-terminal BER92_RS07445 IPR037522 HD-GYP domain BER92_RS07445 IPR001789 Signal transduction response regulator, receiver domain BER92_RS07445 IPR011006 CheY-like superfamily BER92_RS07445 IPR003607 HD/PDEase domain BER92_RS07450 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS07450 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BER92_RS07450 IPR011006 CheY-like superfamily BER92_RS07450 IPR005467 Histidine kinase domain BER92_RS07450 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS07450 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS07450 IPR001789 Signal transduction response regulator, receiver domain BER92_RS07450 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS07450 IPR019247 Histidine kinase BarA, N-terminal BER92_RS07450 IPR036641 HPT domain superfamily BER92_RS07450 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS07450 IPR003660 HAMP domain BER92_RS07455 IPR007383 Protein of unknown function DUF445 BER92_RS07460 IPR017871 ABC transporter, conserved site BER92_RS07460 IPR017882 Zinc import ATP-binding protein ZnuC BER92_RS07460 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS07460 IPR003439 ABC transporter-like BER92_RS07460 IPR003593 AAA+ ATPase domain BER92_RS07470 IPR011701 Major facilitator superfamily BER92_RS07470 IPR020846 Major facilitator superfamily domain BER92_RS07470 IPR036259 MFS transporter superfamily BER92_RS07475 IPR016193 Cytidine deaminase-like BER92_RS07475 IPR003786 Sulfur carrier protein FdhD BER92_RS07480 IPR009010 Aspartate decarboxylase-like domain superfamily BER92_RS07480 IPR037951 YdeP-like, MopB domain BER92_RS07480 IPR006656 Molybdopterin oxidoreductase BER92_RS07480 IPR010046 Oxidoreductase alpha (molybdopterin) subunit BER92_RS07480 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain BER92_RS07495 IPR009057 Homeobox-like domain superfamily BER92_RS07495 IPR002514 Transposase IS3/IS911family BER92_RS07500 IPR036397 Ribonuclease H superfamily BER92_RS07500 IPR001584 Integrase, catalytic core BER92_RS07500 IPR012337 Ribonuclease H-like superfamily BER92_RS07500 IPR025948 HTH-like domain BER92_RS07505 IPR001789 Signal transduction response regulator, receiver domain BER92_RS07505 IPR000160 GGDEF domain BER92_RS07505 IPR011006 CheY-like superfamily BER92_RS07505 IPR029787 Nucleotide cyclase BER92_RS07510 IPR006076 FAD dependent oxidoreductase BER92_RS07510 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS07515 IPR008146 Glutamine synthetase, catalytic domain BER92_RS07515 IPR036651 Glutamine synthetase, N-terminal domain superfamily BER92_RS07515 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BER92_RS07515 IPR027303 Glutamine synthetase, glycine-rich site BER92_RS07520 IPR036651 Glutamine synthetase, N-terminal domain superfamily BER92_RS07520 IPR008146 Glutamine synthetase, catalytic domain BER92_RS07520 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BER92_RS07525 IPR006059 Bacterial extracellular solute-binding protein BER92_RS07525 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein BER92_RS07530 IPR039562 Membrane fusion protein, biotin-lipoyl like domain BER92_RS07535 IPR011701 Major facilitator superfamily BER92_RS07535 IPR020846 Major facilitator superfamily domain BER92_RS07535 IPR036259 MFS transporter superfamily BER92_RS07535 IPR004638 Drug resistance transporter EmrB-like BER92_RS07540 IPR010131 RND efflux system, outer membrane lipoprotein, NodT BER92_RS07540 IPR003423 Outer membrane efflux protein BER92_RS07545 IPR017871 ABC transporter, conserved site BER92_RS07545 IPR003593 AAA+ ATPase domain BER92_RS07545 IPR013611 Transport-associated OB, type 2 BER92_RS07545 IPR003439 ABC transporter-like BER92_RS07545 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit BER92_RS07545 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS07545 IPR008995 Molybdate/tungstate binding, C-terminal BER92_RS07550 IPR035906 MetI-like superfamily BER92_RS07550 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BER92_RS07555 IPR035906 MetI-like superfamily BER92_RS07555 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BER92_RS07560 IPR016162 Aldehyde dehydrogenase, N-terminal BER92_RS07560 IPR016163 Aldehyde dehydrogenase, C-terminal BER92_RS07560 IPR016161 Aldehyde/histidinol dehydrogenase BER92_RS07560 IPR015590 Aldehyde dehydrogenase domain BER92_RS07570 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS07570 IPR000014 PAS domain BER92_RS07570 IPR001610 PAC motif BER92_RS07570 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS07570 IPR011102 Signal transduction histidine kinase, HWE region BER92_RS07570 IPR035965 PAS domain superfamily BER92_RS07570 IPR000700 PAS-associated, C-terminal BER92_RS07575 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 BER92_RS07575 IPR001036 Acriflavin resistance protein BER92_RS07575 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BER92_RS07580 IPR006143 RND efflux pump, membrane fusion protein BER92_RS07580 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BER92_RS07590 IPR007780 NAD-glutamate dehydrogenase, bacteria BER92_RS07590 IPR036291 NAD(P)-binding domain superfamily BER92_RS07590 IPR028971 NAD-glutamate dehydrogenase BER92_RS07615 IPR008718 NolX BER92_RS07630 IPR022789 Antitoxin ParD BER92_RS07630 IPR010985 Ribbon-helix-helix BER92_RS07630 IPR038296 Antitoxin ParD superfamily BER92_RS07655 IPR002585 Cytochrome ubiquinol oxidase subunit 1 BER92_RS07665 IPR002559 Transposase, IS4-like BER92_RS07665 IPR008490 Transposase InsH, N-terminal BER92_RS07670 IPR002514 Transposase IS3/IS911family BER92_RS07670 IPR009057 Homeobox-like domain superfamily BER92_RS07675 IPR001584 Integrase, catalytic core BER92_RS07675 IPR012337 Ribonuclease H-like superfamily BER92_RS07675 IPR036397 Ribonuclease H superfamily BER92_RS07675 IPR025948 HTH-like domain BER92_RS07680 IPR012337 Ribonuclease H-like superfamily BER92_RS07680 IPR036397 Ribonuclease H superfamily BER92_RS07680 IPR025948 HTH-like domain BER92_RS07680 IPR001584 Integrase, catalytic core BER92_RS07690 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS07690 IPR014001 Helicase superfamily 1/2, ATP-binding domain BER92_RS07690 IPR006935 Helicase/UvrB, N-terminal BER92_RS07690 IPR001943 UVR domain BER92_RS07690 IPR024759 UvrB, YAD/RRR-motif-containing domain BER92_RS07690 IPR041471 UvrB, interaction domain BER92_RS07690 IPR004807 UvrABC system, subunit B BER92_RS07690 IPR036876 UVR domain superfamily BER92_RS07690 IPR001650 Helicase, C-terminal BER92_RS07720 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI BER92_RS07720 IPR042217 Type IV secretion system, VirB10/TrbI BER92_RS07725 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BER92_RS07725 IPR001482 Type II/IV secretion system protein BER92_RS07725 IPR014155 Type IV secretion system protein VirB11 BER92_RS07725 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS07730 IPR008258 Transglycosylase SLT domain 1 BER92_RS07730 IPR023346 Lysozyme-like domain superfamily BER92_RS07740 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB BER92_RS07745 IPR004346 CagE, TrbE, VirB component of type IV transporter system BER92_RS07745 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS07745 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain BER92_RS07760 IPR002559 Transposase, IS4-like BER92_RS07760 IPR008490 Transposase InsH, N-terminal BER92_RS07770 IPR008490 Transposase InsH, N-terminal BER92_RS07770 IPR002559 Transposase, IS4-like BER92_RS07785 IPR004346 CagE, TrbE, VirB component of type IV transporter system BER92_RS07785 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS07785 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain BER92_RS07810 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain BER92_RS07810 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS07810 IPR004346 CagE, TrbE, VirB component of type IV transporter system BER92_RS07845 IPR002559 Transposase, IS4-like BER92_RS07845 IPR008490 Transposase InsH, N-terminal BER92_RS07930 IPR000037 SsrA-binding protein BER92_RS07930 IPR020081 SsrA-binding protein, conserved site BER92_RS07930 IPR023620 Small protein B BER92_RS07940 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BER92_RS07940 IPR005346 RnfH protein BER92_RS07940 IPR037021 RnfH superfamily BER92_RS07945 IPR026592 Outer membrane protein assembly factor BamE BER92_RS07945 IPR007450 Lipoprotein SmpA/OmlA BER92_RS07945 IPR037873 BamE-like BER92_RS07950 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS07950 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS07950 IPR002481 Ferric-uptake regulator BER92_RS07955 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS07955 IPR003395 RecF/RecN/SMC, N-terminal BER92_RS07955 IPR004604 DNA recombination/repair protein RecN BER92_RS07960 IPR029016 GAF-like domain superfamily BER92_RS07960 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain BER92_RS07960 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal BER92_RS07960 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS07960 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS07960 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily BER92_RS07960 IPR002571 Heat-inducible transcription repressor HrcA BER92_RS07965 IPR000740 GrpE nucleotide exchange factor BER92_RS07965 IPR013805 GrpE nucleotide exchange factor, coiled-coil BER92_RS07965 IPR009012 GrpE nucleotide exchange factor, head BER92_RS07970 IPR012725 Chaperone DnaK BER92_RS07970 IPR018181 Heat shock protein 70, conserved site BER92_RS07970 IPR013126 Heat shock protein 70 family BER92_RS07970 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily BER92_RS07970 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily BER92_RS07975 IPR036869 Chaperone J-domain superfamily BER92_RS07975 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily BER92_RS07975 IPR001623 DnaJ domain BER92_RS07975 IPR008971 HSP40/DnaJ peptide-binding BER92_RS07975 IPR001305 Heat shock protein DnaJ, cysteine-rich domain BER92_RS07975 IPR012724 Chaperone DnaJ BER92_RS07975 IPR002939 Chaperone DnaJ, C-terminal BER92_RS07980 IPR029056 Ribokinase-like BER92_RS07980 IPR023479 Pyridoxine/pyridoxal/pyridoxamine kinase BER92_RS07980 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase BER92_RS07980 IPR004625 Pyridoxine kinase BER92_RS07985 IPR036291 NAD(P)-binding domain superfamily BER92_RS07985 IPR011277 Chorismate mutase, T-protein BER92_RS07985 IPR002701 Chorismate mutase II, prokaryotic-type BER92_RS07985 IPR036979 Chorismate mutase domain superfamily BER92_RS07985 IPR036263 Chorismate mutase type II superfamily BER92_RS07985 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein BER92_RS07985 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BER92_RS07985 IPR003099 Prephenate dehydrogenase BER92_RS08005 IPR003593 AAA+ ATPase domain BER92_RS08005 IPR011527 ABC transporter type 1, transmembrane domain BER92_RS08005 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS08005 IPR003439 ABC transporter-like BER92_RS08005 IPR017871 ABC transporter, conserved site BER92_RS08005 IPR010132 ATPase, type I secretion system, HlyB BER92_RS08005 IPR005074 Peptidase C39, bacteriocin processing BER92_RS08005 IPR039421 Type I protein exporter BER92_RS08005 IPR036640 ABC transporter type 1, transmembrane domain superfamily BER92_RS08005 IPR039395 Peptidase C39-like A BER92_RS08020 IPR011917 ABC transporter, lipid A export, MsbA BER92_RS08020 IPR036640 ABC transporter type 1, transmembrane domain superfamily BER92_RS08020 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS08020 IPR003593 AAA+ ATPase domain BER92_RS08020 IPR011527 ABC transporter type 1, transmembrane domain BER92_RS08020 IPR017871 ABC transporter, conserved site BER92_RS08020 IPR003439 ABC transporter-like BER92_RS08020 IPR039421 Type I protein exporter BER92_RS08030 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG BER92_RS08030 IPR031100 LOG family BER92_RS08035 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site BER92_RS08035 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BER92_RS08035 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I BER92_RS08035 IPR006258 Dihydrolipoamide dehydrogenase BER92_RS08035 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily BER92_RS08035 IPR023753 FAD/NAD(P)-binding domain BER92_RS08035 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS08040 IPR011053 Single hybrid motif BER92_RS08040 IPR006255 Dihydrolipoamide succinyltransferase BER92_RS08040 IPR004167 Peripheral subunit-binding domain BER92_RS08040 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BER92_RS08040 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain BER92_RS08040 IPR000089 Biotin/lipoyl attachment BER92_RS08040 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily BER92_RS08040 IPR036625 E3-binding domain superfamily BER92_RS08045 IPR001017 Dehydrogenase, E1 component BER92_RS08045 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal BER92_RS08045 IPR029061 Thiamin diphosphate-binding fold BER92_RS08045 IPR005475 Transketolase-like, pyrimidine-binding domain BER92_RS08045 IPR011603 2-oxoglutarate dehydrogenase E1 component BER92_RS08045 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily BER92_RS08045 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain BER92_RS08055 IPR039994 JmjC domain-containing BER92_RS08055 IPR003347 JmjC domain BER92_RS08060 IPR022761 Fumarate lyase, N-terminal BER92_RS08060 IPR024083 Fumarase/histidase, N-terminal BER92_RS08060 IPR020557 Fumarate lyase, conserved site BER92_RS08060 IPR000362 Fumarate lyase family BER92_RS08060 IPR008948 L-Aspartase-like BER92_RS08060 IPR004769 Adenylosuccinate lyase BER92_RS08060 IPR013539 Adenylosuccinate lyase PurB, C-terminal BER92_RS08065 IPR020557 Fumarate lyase, conserved site BER92_RS08065 IPR005677 Fumarate hydratase, class II BER92_RS08065 IPR022761 Fumarate lyase, N-terminal BER92_RS08065 IPR018951 Fumarase C, C-terminal BER92_RS08065 IPR008948 L-Aspartase-like BER92_RS08065 IPR000362 Fumarate lyase family BER92_RS08065 IPR024083 Fumarase/histidase, N-terminal BER92_RS08070 IPR002559 Transposase, IS4-like BER92_RS08070 IPR008490 Transposase InsH, N-terminal BER92_RS08075 IPR009057 Homeobox-like domain superfamily BER92_RS08075 IPR002514 Transposase IS3/IS911family BER92_RS08080 IPR025948 HTH-like domain BER92_RS08080 IPR001584 Integrase, catalytic core BER92_RS08080 IPR036397 Ribonuclease H superfamily BER92_RS08080 IPR012337 Ribonuclease H-like superfamily BER92_RS08085 IPR036397 Ribonuclease H superfamily BER92_RS08085 IPR012337 Ribonuclease H-like superfamily BER92_RS08085 IPR025948 HTH-like domain BER92_RS08085 IPR001584 Integrase, catalytic core BER92_RS08090 IPR008490 Transposase InsH, N-terminal BER92_RS08090 IPR002559 Transposase, IS4-like BER92_RS08100 IPR025161 Putative transposase IS4/IS5 family BER92_RS08105 IPR002559 Transposase, IS4-like BER92_RS08115 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS08115 IPR003439 ABC transporter-like BER92_RS08115 IPR003593 AAA+ ATPase domain BER92_RS08120 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS08120 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS08120 IPR000524 Transcription regulator HTH, GntR BER92_RS08130 IPR000889 Glutathione peroxidase BER92_RS08130 IPR029759 Glutathione peroxidase active site BER92_RS08130 IPR029760 Glutathione peroxidase conserved site BER92_RS08130 IPR036249 Thioredoxin-like superfamily BER92_RS08135 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BER92_RS08135 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal BER92_RS08135 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily BER92_RS08135 IPR008104 Macrophage infectivity potentiator BER92_RS08140 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type BER92_RS08140 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BER92_RS08140 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation BER92_RS08140 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily BER92_RS08140 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal BER92_RS08140 IPR017476 UDP-glucose/GDP-mannose dehydrogenase BER92_RS08140 IPR036291 NAD(P)-binding domain superfamily BER92_RS08140 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal BER92_RS08145 IPR007236 SlyX BER92_RS08160 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BER92_RS08160 IPR000843 LacI-type HTH domain BER92_RS08160 IPR028082 Periplasmic binding protein-like I BER92_RS08165 IPR005964 Bacterial glucose/galactose transporter BER92_RS08165 IPR011701 Major facilitator superfamily BER92_RS08165 IPR036259 MFS transporter superfamily BER92_RS08170 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BER92_RS08170 IPR029056 Ribokinase-like BER92_RS08170 IPR011611 Carbohydrate kinase PfkB BER92_RS08180 IPR036724 Cobalamin-binding domain superfamily BER92_RS08180 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain BER92_RS08180 IPR011005 Dihydropteroate synthase-like BER92_RS08180 IPR003726 Homocysteine-binding domain BER92_RS08180 IPR036589 Homocysteine-binding domain superfamily BER92_RS08180 IPR033706 Methionine synthase, B12-binding domain BER92_RS08180 IPR011822 Cobalamin-dependent methionine synthase BER92_RS08180 IPR036594 Methionine synthase domain BER92_RS08180 IPR000489 Pterin-binding domain BER92_RS08180 IPR004223 Vitamin B12-dependent methionine synthase, activation domain BER92_RS08180 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily BER92_RS08180 IPR006158 Cobalamin (vitamin B12)-binding domain BER92_RS08185 IPR011005 Dihydropteroate synthase-like BER92_RS08185 IPR036589 Homocysteine-binding domain superfamily BER92_RS08185 IPR000489 Pterin-binding domain BER92_RS08185 IPR003726 Homocysteine-binding domain BER92_RS08190 IPR023576 UbiE/COQ5 methyltransferase, conserved site BER92_RS08190 IPR004033 UbiE/COQ5 methyltransferase BER92_RS08190 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS08195 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BER92_RS08195 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BER92_RS08195 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BER92_RS08195 IPR006089 Acyl-CoA dehydrogenase, conserved site BER92_RS08195 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BER92_RS08195 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BER92_RS08195 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily BER92_RS08210 IPR004476 Ribonuclease II/ribonuclease R BER92_RS08210 IPR001900 Ribonuclease II/R BER92_RS08210 IPR013223 Ribonuclease B, N-terminal OB domain BER92_RS08210 IPR013668 Ribonuclease R winged-helix domain BER92_RS08210 IPR022967 RNA-binding domain, S1 BER92_RS08210 IPR012340 Nucleic acid-binding, OB-fold BER92_RS08210 IPR003029 S1 domain BER92_RS08210 IPR040476 RNase II/RNase R, cold shock domain BER92_RS08210 IPR011805 Ribonuclease R BER92_RS08210 IPR022966 Ribonuclease II/R, conserved site BER92_RS08210 IPR011129 Cold shock domain BER92_RS08215 IPR013123 RNA 2-O ribose methyltransferase, substrate binding BER92_RS08215 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BER92_RS08215 IPR001537 tRNA/rRNA methyltransferase, SpoU type BER92_RS08215 IPR004441 RNA methyltransferase TrmH family BER92_RS08215 IPR029064 50S ribosomal protein L30e-like BER92_RS08215 IPR029028 Alpha/beta knot methyltransferases BER92_RS08215 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB BER92_RS08230 IPR013520 Exonuclease, RNase T/DNA polymerase III BER92_RS08230 IPR005987 Ribonuclease T BER92_RS08230 IPR012337 Ribonuclease H-like superfamily BER92_RS08230 IPR036397 Ribonuclease H superfamily BER92_RS08235 IPR026022 PhoU domain BER92_RS08235 IPR028366 Phosphate transport system protein PhoU BER92_RS08235 IPR038078 PhoU-like domain superfamily BER92_RS08240 IPR005670 Phosphate transport system permease protein 1 BER92_RS08240 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS08240 IPR015850 ABC transporter, phosphate import, PstB BER92_RS08240 IPR017871 ABC transporter, conserved site BER92_RS08240 IPR003439 ABC transporter-like BER92_RS08240 IPR003593 AAA+ ATPase domain BER92_RS08245 IPR005672 Phosphate transport system permease protein PstA BER92_RS08245 IPR035906 MetI-like superfamily BER92_RS08245 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BER92_RS08250 IPR035906 MetI-like superfamily BER92_RS08250 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BER92_RS08250 IPR011864 Phosphate ABC transporter, permease protein PstC BER92_RS08255 IPR024370 PBP domain BER92_RS08255 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS BER92_RS08265 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS BER92_RS08265 IPR024370 PBP domain BER92_RS08285 IPR001765 Carbonic anhydrase BER92_RS08285 IPR036874 Carbonic anhydrase superfamily BER92_RS08285 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site BER92_RS08290 IPR001902 SLC26A/SulP transporter BER92_RS08290 IPR011547 SLC26A/SulP transporter domain BER92_RS08290 IPR036513 STAS domain superfamily BER92_RS08290 IPR002645 STAS domain BER92_RS08295 IPR004036 Endonuclease III-like, conserved site-2 BER92_RS08295 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif BER92_RS08295 IPR004035 Endonuclease III, iron-sulphur binding site BER92_RS08295 IPR003265 HhH-GPD domain BER92_RS08295 IPR011257 DNA glycosylase BER92_RS08295 IPR000445 Helix-hairpin-helix motif BER92_RS08295 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal BER92_RS08295 IPR005759 Endonuclease III BER92_RS08310 IPR008104 Macrophage infectivity potentiator BER92_RS08310 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily BER92_RS08310 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal BER92_RS08310 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BER92_RS08315 IPR015797 NUDIX hydrolase-like domain superfamily BER92_RS08315 IPR000086 NUDIX hydrolase domain BER92_RS08315 IPR000059 NUDIX hydrolase, NudL, conserved site BER92_RS08315 IPR023735 Uncharacterised nudix hydrolase NudL BER92_RS08320 IPR001763 Rhodanese-like domain BER92_RS08320 IPR036873 Rhodanese-like domain superfamily BER92_RS08355 IPR000241 Putative RNA methylase domain BER92_RS08355 IPR017244 Ribosomal RNA large subunit methyltransferase K/L BER92_RS08355 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BER92_RS08355 IPR019614 S-adenosylmethionine-dependent methyltransferase BER92_RS08355 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS08355 IPR004114 THUMP domain BER92_RS08360 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal BER92_RS08360 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal BER92_RS08360 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BER92_RS08360 IPR002504 NAD kinase BER92_RS08370 IPR008490 Transposase InsH, N-terminal BER92_RS08370 IPR002559 Transposase, IS4-like BER92_RS08385 IPR012337 Ribonuclease H-like superfamily BER92_RS08385 IPR013520 Exonuclease, RNase T/DNA polymerase III BER92_RS08385 IPR013620 Exodeoxyribonuclease I, C-terminal BER92_RS08385 IPR038649 Exonuclease I, SH3-like domain superfamily BER92_RS08385 IPR034747 Exonuclease I, SH3-like domain BER92_RS08385 IPR034748 Exonuclease I, C-terminal alpha-helical domain BER92_RS08385 IPR036397 Ribonuclease H superfamily BER92_RS08385 IPR023607 Exodeoxyribonuclease I BER92_RS08390 IPR002938 FAD-binding domain BER92_RS08390 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS08390 IPR027545 Kynurenine 3-monooxygenase BER92_RS08395 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS08395 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BER92_RS08395 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS08395 IPR010111 Kynureninase BER92_RS08395 IPR000192 Aminotransferase class V domain BER92_RS08405 IPR011051 RmlC-like cupin domain superfamily BER92_RS08405 IPR010329 3-hydroxyanthranilic acid dioxygenase BER92_RS08405 IPR014710 RmlC-like jelly roll fold BER92_RS08410 IPR001765 Carbonic anhydrase BER92_RS08410 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site BER92_RS08410 IPR036874 Carbonic anhydrase superfamily BER92_RS08415 IPR012349 FMN-binding split barrel BER92_RS08415 IPR007396 Transcriptional regulator PAI 2-type BER92_RS08435 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BER92_RS08435 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb BER92_RS08435 IPR004522 Asparagine-tRNA ligase BER92_RS08435 IPR006195 Aminoacyl-tRNA synthetase, class II BER92_RS08435 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BER92_RS08435 IPR012340 Nucleic acid-binding, OB-fold BER92_RS08440 IPR035903 HesB-like domain superfamily BER92_RS08440 IPR000361 FeS cluster biogenesis BER92_RS08440 IPR016092 FeS cluster insertion protein BER92_RS08440 IPR017870 FeS cluster insertion, C-terminal, conserved site BER92_RS08445 IPR000529 Ribosomal protein S6 BER92_RS08445 IPR035980 Ribosomal protein S6 superfamily BER92_RS08445 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BER92_RS08445 IPR020814 Ribosomal protein S6, plastid/chloroplast BER92_RS08450 IPR001648 Ribosomal protein S18 BER92_RS08450 IPR018275 Ribosomal protein S18, conserved site BER92_RS08450 IPR036870 Ribosomal protein S18 superfamily BER92_RS08455 IPR036935 Ribosomal protein L9, N-terminal domain superfamily BER92_RS08455 IPR020069 Ribosomal protein L9, C-terminal BER92_RS08455 IPR020070 Ribosomal protein L9, N-terminal BER92_RS08455 IPR020594 Ribosomal protein L9, bacteria/chloroplast BER92_RS08455 IPR009027 Ribosomal protein L9/RNase H1, N-terminal BER92_RS08455 IPR000244 Ribosomal protein L9 BER92_RS08455 IPR036791 Ribosomal protein L9, C-terminal domain superfamily BER92_RS08460 IPR003395 RecF/RecN/SMC, N-terminal BER92_RS08460 IPR024704 Structural maintenance of chromosomes protein BER92_RS08460 IPR010935 SMCs flexible hinge BER92_RS08460 IPR036277 SMCs flexible hinge superfamily BER92_RS08460 IPR011890 Structural maintenance of chromosomes protein, prokaryotic BER92_RS08460 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS08465 IPR007449 ZipA, C-terminal FtsZ-binding domain BER92_RS08465 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily BER92_RS08465 IPR011919 Cell division protein ZipA BER92_RS08470 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type BER92_RS08470 IPR010994 RuvA domain 2-like BER92_RS08470 IPR004150 NAD-dependent DNA ligase, OB-fold BER92_RS08470 IPR001357 BRCT domain BER92_RS08470 IPR012340 Nucleic acid-binding, OB-fold BER92_RS08470 IPR013840 NAD-dependent DNA ligase, N-terminal BER92_RS08470 IPR013839 NAD-dependent DNA ligase, adenylation BER92_RS08470 IPR001679 NAD-dependent DNA ligase BER92_RS08470 IPR018239 NAD-dependent DNA ligase, active site BER92_RS08470 IPR041663 DisA/LigA, helix-hairpin-helix motif BER92_RS08470 IPR036420 BRCT domain superfamily BER92_RS08475 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal BER92_RS08475 IPR006195 Aminoacyl-tRNA synthetase, class II BER92_RS08475 IPR004525 Elongation factor P--(R)-beta-lysine ligase BER92_RS08475 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BER92_RS08490 IPR037171 NagB/RpiA transferase-like BER92_RS08490 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal BER92_RS08490 IPR011559 Initiation factor 2B alpha/beta/delta BER92_RS08490 IPR005251 Methylthioribose-1-phosphate isomerase BER92_RS08490 IPR000649 Initiation factor 2B-related BER92_RS08495 IPR013760 DNA topoisomerase, type IIA-like domain superfamily BER92_RS08495 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat BER92_RS08495 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BER92_RS08495 IPR005743 DNA gyrase, subunit A BER92_RS08495 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta BER92_RS08495 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily BER92_RS08495 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal BER92_RS08510 IPR023637 Urocanase BER92_RS08510 IPR035401 Urocanase, C-terminal domain BER92_RS08510 IPR023636 Urocanase conserved site BER92_RS08510 IPR035400 Urocanase, N-terminal domain BER92_RS08510 IPR035085 Urocanase, Rossmann-like domain BER92_RS08510 IPR038364 Urocanase, central domain superfamily BER92_RS08510 IPR036190 Urocanase superfamily BER92_RS08520 IPR024083 Fumarase/histidase, N-terminal BER92_RS08520 IPR005921 Histidine ammonia-lyase BER92_RS08520 IPR008948 L-Aspartase-like BER92_RS08520 IPR022313 Phenylalanine/histidine ammonia-lyases, active site BER92_RS08520 IPR001106 Aromatic amino acid lyase BER92_RS08525 IPR013108 Amidohydrolase 3 BER92_RS08525 IPR005920 Imidazolonepropionase BER92_RS08525 IPR011059 Metal-dependent hydrolase, composite domain superfamily BER92_RS08525 IPR032466 Metal-dependent hydrolase BER92_RS08555 IPR013130 Ferric reductase transmembrane component-like domain BER92_RS08555 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ BER92_RS08560 IPR003817 Phosphatidylserine decarboxylase-related BER92_RS08560 IPR033177 Phosphatidylserine decarboxylase BER92_RS08560 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 BER92_RS08565 IPR003782 Copper chaperone SCO1/SenC BER92_RS08565 IPR036249 Thioredoxin-like superfamily BER92_RS08570 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BER92_RS08570 IPR004556 Methyltransferase HemK-like BER92_RS08570 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase BER92_RS08570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS08570 IPR007848 Methyltransferase small domain BER92_RS08580 IPR000453 Chorismate synthase BER92_RS08580 IPR020541 Chorismate synthase, conserved site BER92_RS08580 IPR035904 Chorismate synthase AroC superfamily BER92_RS08585 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BER92_RS08585 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BER92_RS08585 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BER92_RS08585 IPR036291 NAD(P)-binding domain superfamily BER92_RS08585 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BER92_RS08590 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type BER92_RS08590 IPR012280 Semialdehyde dehydrogenase, dimerisation domain BER92_RS08590 IPR000534 Semialdehyde dehydrogenase, NAD-binding BER92_RS08590 IPR036291 NAD(P)-binding domain superfamily BER92_RS08590 IPR012080 Aspartate-semialdehyde dehydrogenase BER92_RS08600 IPR003660 HAMP domain BER92_RS08600 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BER92_RS08600 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BER92_RS08600 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BER92_RS08600 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BER92_RS08600 IPR004090 Chemotaxis methyl-accepting receptor BER92_RS08605 IPR014774 KaiC-like domain BER92_RS08605 IPR013503 Circadian clock KaiC, bacteria BER92_RS08605 IPR030665 Circadian clock protein kinase KaiC BER92_RS08605 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS08605 IPR010624 KaiC domain BER92_RS08610 IPR005467 Histidine kinase domain BER92_RS08610 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS08610 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS08610 IPR011006 CheY-like superfamily BER92_RS08610 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS08610 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS08610 IPR000014 PAS domain BER92_RS08610 IPR035965 PAS domain superfamily BER92_RS08610 IPR013656 PAS fold-4 BER92_RS08610 IPR001789 Signal transduction response regulator, receiver domain BER92_RS08610 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS08615 IPR009057 Homeobox-like domain superfamily BER92_RS08615 IPR002514 Transposase IS3/IS911family BER92_RS08635 IPR005616 CcmH/CycL/Ccl2/NrfF family BER92_RS08635 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily BER92_RS08640 IPR003568 Cytochrome c-type biogenesis protein CcmF BER92_RS08640 IPR003567 Cytochrome c-type biogenesis protein BER92_RS08640 IPR002541 Cytochrome c assembly protein BER92_RS08640 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal BER92_RS08645 IPR002541 Cytochrome c assembly protein BER92_RS08645 IPR003557 Cytochrome c-type biogenesis protein CcmC BER92_RS08650 IPR034084 Thermitase-like, domain BER92_RS08650 IPR023827 Peptidase S8, subtilisin, Asp-active site BER92_RS08650 IPR023828 Peptidase S8, subtilisin, Ser-active site BER92_RS08650 IPR022398 Peptidase S8, subtilisin, His-active site BER92_RS08650 IPR015500 Peptidase S8, subtilisin-related BER92_RS08650 IPR000209 Peptidase S8/S53 domain BER92_RS08650 IPR036852 Peptidase S8/S53 domain superfamily BER92_RS08660 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BER92_RS08660 IPR013324 RNA polymerase sigma factor, region 3/4-like BER92_RS08660 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS08660 IPR014286 RNA polymerase sigma-70 RpoE type BER92_RS08660 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BER92_RS08660 IPR013325 RNA polymerase sigma factor, region 2 BER92_RS08660 IPR007627 RNA polymerase sigma-70 region 2 BER92_RS08660 IPR039425 RNA polymerase sigma-70 like BER92_RS08660 IPR014284 RNA polymerase sigma-70 like domain BER92_RS08685 IPR020846 Major facilitator superfamily domain BER92_RS08685 IPR005828 Major facilitator, sugar transporter-like BER92_RS08685 IPR005829 Sugar transporter, conserved site BER92_RS08685 IPR036259 MFS transporter superfamily BER92_RS08685 IPR003663 Sugar/inositol transporter BER92_RS08690 IPR019949 Luciferase family oxidoreductase, group 1 BER92_RS08690 IPR036661 Luciferase-like domain superfamily BER92_RS08690 IPR011251 Luciferase-like domain BER92_RS08700 IPR016169 FAD-binding, type PCMH, subdomain 2 BER92_RS08700 IPR036318 FAD-binding, type PCMH-like superfamily BER92_RS08700 IPR002550 CNNM, transmembrane domain BER92_RS08700 IPR005170 Transporter-associated domain BER92_RS08700 IPR000644 CBS domain BER92_RS08710 IPR001204 Phosphate transporter BER92_RS08715 IPR003848 Domain of unknown function DUF218 BER92_RS08725 IPR018522 DNA topoisomerase, type IIA, conserved site BER92_RS08725 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 BER92_RS08725 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BER92_RS08725 IPR001241 DNA topoisomerase, type IIA BER92_RS08725 IPR013760 DNA topoisomerase, type IIA-like domain superfamily BER92_RS08725 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative BER92_RS08725 IPR002288 DNA gyrase B subunit, C-terminal BER92_RS08725 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal BER92_RS08725 IPR020568 Ribosomal protein S5 domain 2-type fold BER92_RS08725 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS08725 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS08725 IPR006171 TOPRIM domain BER92_RS08735 IPR004468 CTP synthase BER92_RS08735 IPR017456 CTP synthase, N-terminal BER92_RS08735 IPR029062 Class I glutamine amidotransferase-like BER92_RS08735 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS08735 IPR017926 Glutamine amidotransferase BER92_RS08735 IPR033828 CTP synthase GATase domain BER92_RS08740 IPR006218 DAHP synthetase I/KDSA BER92_RS08740 IPR013785 Aldolase-type TIM barrel BER92_RS08740 IPR006269 3-deoxy-8-phosphooctulonate synthase BER92_RS08745 IPR000941 Enolase BER92_RS08745 IPR029017 Enolase-like, N-terminal BER92_RS08745 IPR020810 Enolase, C-terminal TIM barrel domain BER92_RS08745 IPR020809 Enolase, conserved site BER92_RS08745 IPR020811 Enolase, N-terminal BER92_RS08745 IPR036849 Enolase-like, C-terminal domain superfamily BER92_RS08750 IPR023081 Cell division protein FtsB BER92_RS08750 IPR007060 Septum formation initiator FtsL/DivIC BER92_RS08755 IPR034683 Cytidylyltransferase IspD/TarI BER92_RS08755 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site BER92_RS08755 IPR029044 Nucleotide-diphospho-sugar transferases BER92_RS08755 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BER92_RS08760 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily BER92_RS08760 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site BER92_RS08760 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase BER92_RS08765 IPR001656 Pseudouridine synthase, TruD BER92_RS08765 IPR020103 Pseudouridine synthase, catalytic domain superfamily BER92_RS08765 IPR042214 Pseudouridine synthase, TruD, catalytic domain BER92_RS08765 IPR011760 Pseudouridine synthase, TruD, insertion domain BER92_RS08765 IPR020119 Pseudouridine synthase TruD, conserved site BER92_RS08770 IPR002625 Smr domain BER92_RS08770 IPR036063 Smr domain superfamily BER92_RS08770 IPR022990 Uncharacterised protein family UPF0115 BER92_RS08775 IPR036523 SurE-like phosphatase/nucleotidase superfamily BER92_RS08775 IPR002828 Survival protein SurE-like phosphatase/nucleotidase BER92_RS08775 IPR030048 Survival protein SurE BER92_RS08780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS08780 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase BER92_RS08785 IPR032816 SNARE associated Golgi protein BER92_RS08790 IPR036779 LysM domain superfamily BER92_RS08790 IPR018392 LysM domain BER92_RS08790 IPR011055 Duplicated hybrid motif BER92_RS08790 IPR016047 Peptidase M23 BER92_RS08825 IPR008490 Transposase InsH, N-terminal BER92_RS08835 IPR000073 Alpha/beta hydrolase fold-1 BER92_RS08835 IPR008220 Homoserine/serine acetyltransferase MetX-like BER92_RS08835 IPR029058 Alpha/Beta hydrolase fold BER92_RS08840 IPR008490 Transposase InsH, N-terminal BER92_RS08845 IPR017560 Cytochrome c-type biogenesis protein CcmI BER92_RS08845 IPR019734 Tetratricopeptide repeat BER92_RS08845 IPR011990 Tetratricopeptide-like helical domain superfamily BER92_RS08845 IPR013026 Tetratricopeptide repeat-containing domain BER92_RS08850 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily BER92_RS08850 IPR005616 CcmH/CycL/Ccl2/NrfF family BER92_RS08855 IPR017937 Thioredoxin, conserved site BER92_RS08855 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE BER92_RS08855 IPR013740 Redoxin BER92_RS08855 IPR036249 Thioredoxin-like superfamily BER92_RS08855 IPR013766 Thioredoxin domain BER92_RS08860 IPR003568 Cytochrome c-type biogenesis protein CcmF BER92_RS08860 IPR003567 Cytochrome c-type biogenesis protein BER92_RS08860 IPR002541 Cytochrome c assembly protein BER92_RS08860 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal BER92_RS08865 IPR004329 CcmE/CycJ protein BER92_RS08865 IPR036127 CcmE-like superfamily BER92_RS08875 IPR003557 Cytochrome c-type biogenesis protein CcmC BER92_RS08875 IPR002541 Cytochrome c assembly protein BER92_RS08880 IPR003544 Cytochrome c-type biogenesis protein CcmB BER92_RS08880 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria BER92_RS08885 IPR003593 AAA+ ATPase domain BER92_RS08885 IPR017871 ABC transporter, conserved site BER92_RS08885 IPR003439 ABC transporter-like BER92_RS08885 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS08885 IPR005895 ABC transporter, haem export, CcmA BER92_RS08890 IPR004839 Aminotransferase, class I/classII BER92_RS08890 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS08890 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BER92_RS08890 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS08895 IPR036526 Carbon-nitrogen hydrolase superfamily BER92_RS08895 IPR001110 Uncharacterised protein family UPF0012, conserved site BER92_RS08895 IPR003010 Carbon-nitrogen hydrolase BER92_RS08910 IPR006145 Pseudouridine synthase, RsuA/RluA BER92_RS08910 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain BER92_RS08910 IPR020103 Pseudouridine synthase, catalytic domain superfamily BER92_RS08910 IPR036986 RNA-binding S4 domain superfamily BER92_RS08910 IPR002942 RNA-binding S4 domain BER92_RS08910 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BER92_RS08910 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BER92_RS08915 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS08915 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS08915 IPR005234 Chromosome segregation/condensation protein ScpB BER92_RS08920 IPR003768 Segregation and condensation protein A BER92_RS08925 IPR005545 YCII-related BER92_RS08925 IPR011008 Dimeric alpha-beta barrel BER92_RS08935 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BER92_RS08935 IPR000843 LacI-type HTH domain BER92_RS08935 IPR028082 Periplasmic binding protein-like I BER92_RS08955 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BER92_RS08955 IPR035906 MetI-like superfamily BER92_RS08960 IPR035906 MetI-like superfamily BER92_RS08960 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BER92_RS08975 IPR008490 Transposase InsH, N-terminal BER92_RS08990 IPR003010 Carbon-nitrogen hydrolase BER92_RS08990 IPR036526 Carbon-nitrogen hydrolase superfamily BER92_RS08990 IPR001110 Uncharacterised protein family UPF0012, conserved site BER92_RS08995 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type BER92_RS08995 IPR017754 Agmatine deiminase BER92_RS09005 IPR003136 Cytidylate kinase BER92_RS09005 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS09005 IPR011994 Cytidylate kinase domain BER92_RS09010 IPR022967 RNA-binding domain, S1 BER92_RS09010 IPR003029 S1 domain BER92_RS09010 IPR000110 Ribosomal protein S1 BER92_RS09010 IPR012340 Nucleic acid-binding, OB-fold BER92_RS09015 IPR020816 Histone-like DNA-binding protein, conserved site BER92_RS09015 IPR000119 Histone-like DNA-binding protein BER92_RS09015 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily BER92_RS09015 IPR005685 Integration host factor, beta subunit BER92_RS09025 IPR019734 Tetratricopeptide repeat BER92_RS09025 IPR013026 Tetratricopeptide repeat-containing domain BER92_RS09025 IPR041166 LapB, rubredoxin metal binding domain BER92_RS09025 IPR030865 Lipopolysaccharide assembly protein B BER92_RS09025 IPR011990 Tetratricopeptide-like helical domain superfamily BER92_RS09030 IPR000715 Glycosyl transferase, family 4 BER92_RS09035 IPR036291 NAD(P)-binding domain superfamily BER92_RS09035 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain BER92_RS09035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS09040 IPR029044 Nucleotide-diphospho-sugar transferases BER92_RS09040 IPR005835 Nucleotidyl transferase domain BER92_RS09040 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type BER92_RS09045 IPR004771 K+/H+ exchanger BER92_RS09045 IPR006153 Cation/H+ exchanger BER92_RS09045 IPR023941 Glutathione-regulated potassium-efflux system protein KefC BER92_RS09045 IPR006036 Potassium uptake protein TrkA BER92_RS09045 IPR038770 Sodium/solute symporter superfamily BER92_RS09045 IPR036291 NAD(P)-binding domain superfamily BER92_RS09045 IPR003148 Regulator of K+ conductance, N-terminal BER92_RS09050 IPR009057 Homeobox-like domain superfamily BER92_RS09050 IPR002514 Transposase IS3/IS911family BER92_RS09055 IPR025948 HTH-like domain BER92_RS09065 IPR008490 Transposase InsH, N-terminal BER92_RS09080 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BER92_RS09080 IPR036291 NAD(P)-binding domain superfamily BER92_RS09080 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase BER92_RS09080 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BER92_RS09080 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site BER92_RS09085 IPR015875 IMP dehydrogenase / GMP reductase, conserved site BER92_RS09085 IPR001093 IMP dehydrogenase/GMP reductase BER92_RS09085 IPR013785 Aldolase-type TIM barrel BER92_RS09085 IPR000644 CBS domain BER92_RS09085 IPR005990 Inosine-5'-monophosphate dehydrogenase BER92_RS09090 IPR029062 Class I glutamine amidotransferase-like BER92_RS09090 IPR017926 Glutamine amidotransferase BER92_RS09090 IPR001674 GMP synthase, C-terminal BER92_RS09090 IPR004739 GMP synthase, glutamine amidotransferase BER92_RS09090 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS09090 IPR022955 GMP synthase BER92_RS09090 IPR025777 GMP synthetase ATP pyrophosphatase domain BER92_RS09090 IPR022310 NAD/GMP synthase BER92_RS09095 IPR002104 Integrase, catalytic domain BER92_RS09095 IPR038488 Integrase, DNA-binding domain superfamily BER92_RS09095 IPR013762 Integrase-like, catalytic domain superfamily BER92_RS09095 IPR011010 DNA breaking-rejoining enzyme, catalytic core BER92_RS09095 IPR025166 Integrase, DNA-binding domain BER92_RS09095 IPR010998 Integrase/recombinase, N-terminal BER92_RS09105 IPR008490 Transposase InsH, N-terminal BER92_RS09120 IPR038724 Regulatory protein RepA BER92_RS09120 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS09130 IPR035225 Protein of unknown function DUF5338 BER92_RS09135 IPR013321 Arc-type ribbon-helix-helix BER92_RS09135 IPR010985 Ribbon-helix-helix BER92_RS09140 IPR002716 PIN domain BER92_RS09140 IPR029060 PIN-like domain superfamily BER92_RS09140 IPR022907 VapC family BER92_RS09150 IPR002514 Transposase IS3/IS911family BER92_RS09150 IPR009057 Homeobox-like domain superfamily BER92_RS09155 IPR008490 Transposase InsH, N-terminal BER92_RS09160 IPR036397 Ribonuclease H superfamily BER92_RS09160 IPR025948 HTH-like domain BER92_RS09160 IPR012337 Ribonuclease H-like superfamily BER92_RS09160 IPR001584 Integrase, catalytic core BER92_RS09185 IPR008490 Transposase InsH, N-terminal BER92_RS09190 IPR006195 Aminoacyl-tRNA synthetase, class II BER92_RS09190 IPR033656 Histidyl-anticodon-binding BER92_RS09190 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit BER92_RS09190 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain BER92_RS09190 IPR004154 Anticodon-binding BER92_RS09190 IPR015807 Histidine-tRNA ligase BER92_RS09190 IPR036621 Anticodon-binding domain superfamily BER92_RS09200 IPR013820 ATP phosphoribosyltransferase, catalytic domain BER92_RS09200 IPR018198 ATP phosphoribosyltransferase, conserved site BER92_RS09200 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BER92_RS09200 IPR013115 Histidine biosynthesis HisG, C-terminal BER92_RS09200 IPR001348 ATP phosphoribosyltransferase HisG BER92_RS09200 IPR020621 ATP phosphoribosyltransferase HisG, long form BER92_RS09205 IPR016161 Aldehyde/histidinol dehydrogenase BER92_RS09205 IPR001692 Histidinol dehydrogenase, conserved site BER92_RS09205 IPR022695 Histidinol dehydrogenase, monofunctional BER92_RS09205 IPR012131 Histidinol dehydrogenase BER92_RS09210 IPR004839 Aminotransferase, class I/classII BER92_RS09210 IPR005861 Histidinol-phosphate aminotransferase family BER92_RS09210 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS09210 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BER92_RS09210 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS09215 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily BER92_RS09215 IPR006549 HAD-superfamily hydrolase,subfamily IIIA BER92_RS09215 IPR023214 HAD superfamily BER92_RS09215 IPR020566 Histidine biosynthesis bifunctional protein HisB BER92_RS09215 IPR005954 Histidinol-phosphatase BER92_RS09215 IPR006543 Histidinol-phosphate phosphatase BER92_RS09215 IPR000807 Imidazoleglycerol-phosphate dehydratase BER92_RS09215 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site BER92_RS09215 IPR020568 Ribosomal protein S5 domain 2-type fold BER92_RS09215 IPR036412 HAD-like superfamily BER92_RS09220 IPR029062 Class I glutamine amidotransferase-like BER92_RS09220 IPR017926 Glutamine amidotransferase BER92_RS09220 IPR010139 Imidazole glycerol phosphate synthase, subunit H BER92_RS09225 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA BER92_RS09225 IPR006062 Histidine biosynthesis BER92_RS09225 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase BER92_RS09225 IPR011060 Ribulose-phosphate binding barrel BER92_RS09225 IPR013785 Aldolase-type TIM barrel BER92_RS09230 IPR004651 Histidine biosynthesis, HisF BER92_RS09230 IPR013785 Aldolase-type TIM barrel BER92_RS09230 IPR006062 Histidine biosynthesis BER92_RS09230 IPR011060 Ribulose-phosphate binding barrel BER92_RS09235 IPR023019 Histidine biosynthesis bifunctional protein HisIE BER92_RS09235 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase BER92_RS09235 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily BER92_RS09235 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain BER92_RS09235 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like BER92_RS09260 IPR036412 HAD-like superfamily BER92_RS09260 IPR023943 Enolase-phosphatase E1 BER92_RS09260 IPR006439 HAD hydrolase, subfamily IA BER92_RS09260 IPR023214 HAD superfamily BER92_RS09265 IPR011051 RmlC-like cupin domain superfamily BER92_RS09265 IPR023956 Acireductone dioxygenase ARD, bacteria BER92_RS09265 IPR004313 Acireductone dioxygenase ARD family BER92_RS09265 IPR014710 RmlC-like jelly roll fold BER92_RS09270 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BER92_RS09270 IPR001303 Class II aldolase/adducin N-terminal BER92_RS09270 IPR017714 Methylthioribulose-1-phosphate dehydratase BER92_RS09275 IPR004758 Amino acid transporter BER92_RS09275 IPR002293 Amino acid/polyamine transporter I BER92_RS09280 IPR004758 Amino acid transporter BER92_RS09280 IPR002293 Amino acid/polyamine transporter I BER92_RS09290 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BER92_RS09290 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BER92_RS09290 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BER92_RS09290 IPR002912 ACT domain BER92_RS09290 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain BER92_RS09290 IPR036291 NAD(P)-binding domain superfamily BER92_RS09295 IPR006094 FAD linked oxidase, N-terminal BER92_RS09295 IPR036318 FAD-binding, type PCMH-like superfamily BER92_RS09295 IPR016164 FAD-linked oxidase-like, C-terminal BER92_RS09295 IPR004113 FAD-linked oxidase, C-terminal BER92_RS09295 IPR004490 Glycolate oxidase subunit GlcD BER92_RS09295 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 BER92_RS09295 IPR016166 FAD-binding domain, PCMH-type BER92_RS09310 IPR020599 Translation elongation factor P/YeiP BER92_RS09310 IPR008991 Translation protein SH3-like domain superfamily BER92_RS09310 IPR013852 Translation elongation factor P/YeiP, conserved site BER92_RS09310 IPR001059 Translation elongation factor P/YeiP, central BER92_RS09310 IPR013185 Translation elongation factor, KOW-like BER92_RS09310 IPR014722 Ribosomal protein L2, domain 2 BER92_RS09310 IPR011897 Translation elongation factor P-like, YeiP BER92_RS09310 IPR015365 Elongation factor P, C-terminal BER92_RS09310 IPR012340 Nucleic acid-binding, OB-fold BER92_RS09315 IPR020904 Short-chain dehydrogenase/reductase, conserved site BER92_RS09315 IPR036291 NAD(P)-binding domain superfamily BER92_RS09315 IPR002347 Short-chain dehydrogenase/reductase SDR BER92_RS09320 IPR013785 Aldolase-type TIM barrel BER92_RS09320 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site BER92_RS09320 IPR000891 Pyruvate carboxyltransferase BER92_RS09325 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BER92_RS09325 IPR001753 Enoyl-CoA hydratase/isomerase BER92_RS09325 IPR014748 Enoyl-CoA hydratase, C-terminal BER92_RS09325 IPR029045 ClpP/crotonase-like domain superfamily BER92_RS09335 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS09335 IPR006073 GTP binding domain BER92_RS09335 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain BER92_RS09335 IPR011640 Ferrous iron transport protein B, C-terminal BER92_RS09335 IPR003373 Ferrous iron transport protein B BER92_RS09335 IPR030389 FeoB-type guanine nucleotide-binding (G) domain BER92_RS09355 IPR022664 Dihydrodipicolinate reductase, conserved site BER92_RS09355 IPR000846 Dihydrodipicolinate reductase, N-terminal BER92_RS09355 IPR023940 Dihydrodipicolinate reductase BER92_RS09355 IPR036291 NAD(P)-binding domain superfamily BER92_RS09355 IPR022663 Dihydrodipicolinate reductase, C-terminal BER92_RS09360 IPR006274 Carbamoyl-phosphate synthase, small subunit BER92_RS09360 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain BER92_RS09360 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily BER92_RS09360 IPR029062 Class I glutamine amidotransferase-like BER92_RS09360 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain BER92_RS09360 IPR017926 Glutamine amidotransferase BER92_RS09375 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain BER92_RS09375 IPR011607 Methylglyoxal synthase-like domain BER92_RS09375 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain BER92_RS09375 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain BER92_RS09375 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily BER92_RS09375 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain BER92_RS09375 IPR016185 Pre-ATP-grasp domain superfamily BER92_RS09375 IPR011761 ATP-grasp fold BER92_RS09375 IPR006275 Carbamoyl-phosphate synthase, large subunit BER92_RS09375 IPR036914 Methylglyoxal synthase-like domain superfamily BER92_RS09380 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal BER92_RS09380 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily BER92_RS09380 IPR018151 Transcription elongation factor, GreA/GreB, conserved site BER92_RS09380 IPR006359 Transcription elongation factor GreA BER92_RS09380 IPR028624 Transcription elongation factor GreA/GreB BER92_RS09380 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal BER92_RS09380 IPR023459 Transcription elongation factor GreA/GreB family BER92_RS09380 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily BER92_RS09390 IPR001667 DDH domain BER92_RS09390 IPR003156 DHHA1 domain BER92_RS09390 IPR004610 Bacterial RecJ exonuclease BER92_RS09390 IPR041122 RecJ, OB domain BER92_RS09390 IPR038763 DHH phosphoesterase superfamily BER92_RS09395 IPR005139 Peptide chain release factor BER92_RS09395 IPR004374 Peptide chain release factor 2 BER92_RS09395 IPR000352 Peptide chain release factor class I BER92_RS09400 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BER92_RS09400 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BER92_RS09400 IPR006195 Aminoacyl-tRNA synthetase, class II BER92_RS09400 IPR002313 Lysine-tRNA ligase, class II BER92_RS09400 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal BER92_RS09400 IPR012340 Nucleic acid-binding, OB-fold BER92_RS09405 IPR003607 HD/PDEase domain BER92_RS09405 IPR037522 HD-GYP domain BER92_RS09405 IPR011006 CheY-like superfamily BER92_RS09405 IPR001789 Signal transduction response regulator, receiver domain BER92_RS09415 IPR001789 Signal transduction response regulator, receiver domain BER92_RS09415 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS09415 IPR005467 Histidine kinase domain BER92_RS09415 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS09415 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS09415 IPR036641 HPT domain superfamily BER92_RS09415 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS09415 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BER92_RS09415 IPR011006 CheY-like superfamily BER92_RS09415 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS09420 IPR029045 ClpP/crotonase-like domain superfamily BER92_RS09420 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site BER92_RS09420 IPR001753 Enoyl-CoA hydratase/isomerase BER92_RS09420 IPR014748 Enoyl-CoA hydratase, C-terminal BER92_RS09425 IPR000873 AMP-dependent synthetase/ligase BER92_RS09425 IPR025110 AMP-binding enzyme, C-terminal domain BER92_RS09425 IPR042099 AMP-dependent synthetase-like superfamily BER92_RS09425 IPR020845 AMP-binding, conserved site BER92_RS09435 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 BER92_RS09435 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain BER92_RS09435 IPR036008 Aconitase, iron-sulfur domain BER92_RS09435 IPR018136 Aconitase family, 4Fe-4S cluster binding site BER92_RS09435 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain BER92_RS09435 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BER92_RS09435 IPR006249 Aconitase/Iron-responsive element-binding protein 2 BER92_RS09450 IPR018136 Aconitase family, 4Fe-4S cluster binding site BER92_RS09450 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BER92_RS09450 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain BER92_RS09450 IPR036008 Aconitase, iron-sulfur domain BER92_RS09450 IPR004406 Aconitase B BER92_RS09450 IPR015933 Aconitase B, HEAT-like domain BER92_RS09450 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 BER92_RS09450 IPR015929 Aconitase B, swivel BER92_RS09450 IPR015932 Aconitase, domain 2 BER92_RS09450 IPR036288 Aconitase B, HEAT-like domain superfamily BER92_RS09455 IPR019913 Pyrimidine utilisation protein RutD BER92_RS09455 IPR029058 Alpha/Beta hydrolase fold BER92_RS09455 IPR000073 Alpha/beta hydrolase fold-1 BER92_RS09460 IPR029787 Nucleotide cyclase BER92_RS09460 IPR005330 MHYT domain BER92_RS09460 IPR035919 EAL domain superfamily BER92_RS09460 IPR001633 EAL domain BER92_RS09460 IPR000160 GGDEF domain BER92_RS09465 IPR035909 Methylesterase CheB, C-terminal BER92_RS09465 IPR011006 CheY-like superfamily BER92_RS09465 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase BER92_RS09465 IPR001789 Signal transduction response regulator, receiver domain BER92_RS09465 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type BER92_RS09470 IPR038592 CheD-like superfamily BER92_RS09470 IPR011324 Cytotoxic necrotizing factor-like, catalytic BER92_RS09470 IPR005659 Chemoreceptor glutamine deamidase CheD BER92_RS09475 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BER92_RS09475 IPR026024 Chemotaxis protein methyltransferase CheR BER92_RS09475 IPR000780 MCP methyltransferase, CheR-type BER92_RS09475 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily BER92_RS09475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS09475 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BER92_RS09485 IPR002545 CheW-like domain BER92_RS09485 IPR036061 CheW-like domain superfamily BER92_RS09485 IPR039315 Chemotaxis protein CheW BER92_RS09495 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BER92_RS09495 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BER92_RS09495 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BER92_RS09495 IPR003660 HAMP domain BER92_RS09495 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BER92_RS09495 IPR004090 Chemotaxis methyl-accepting receptor BER92_RS09505 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BER92_RS09505 IPR004090 Chemotaxis methyl-accepting receptor BER92_RS09505 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BER92_RS09505 IPR003660 HAMP domain BER92_RS09505 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BER92_RS09505 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BER92_RS09510 IPR004090 Chemotaxis methyl-accepting receptor BER92_RS09510 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BER92_RS09510 IPR003660 HAMP domain BER92_RS09510 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BER92_RS09510 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BER92_RS09510 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BER92_RS09520 IPR003660 HAMP domain BER92_RS09520 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BER92_RS09520 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BER92_RS09520 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BER92_RS09520 IPR004090 Chemotaxis methyl-accepting receptor BER92_RS09520 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BER92_RS09540 IPR004105 Histidine kinase CheA-like, homodimeric domain BER92_RS09540 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BER92_RS09540 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS09540 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS09540 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS09540 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS09540 IPR035891 CheY-binding domain of CheA BER92_RS09540 IPR015162 CheY binding BER92_RS09540 IPR002545 CheW-like domain BER92_RS09540 IPR036061 CheW-like domain superfamily BER92_RS09540 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily BER92_RS09540 IPR036641 HPT domain superfamily BER92_RS09540 IPR005467 Histidine kinase domain BER92_RS09545 IPR011006 CheY-like superfamily BER92_RS09545 IPR001789 Signal transduction response regulator, receiver domain BER92_RS09555 IPR039315 Chemotaxis protein CheW BER92_RS09555 IPR036061 CheW-like domain superfamily BER92_RS09555 IPR002545 CheW-like domain BER92_RS09560 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS09560 IPR025669 AAA domain BER92_RS09565 IPR025713 Motility protein B, N-terminal domain BER92_RS09565 IPR006665 OmpA-like domain BER92_RS09565 IPR036737 OmpA-like domain superfamily BER92_RS09570 IPR002898 MotA/TolQ/ExbB proton channel BER92_RS09570 IPR000540 Flagellar motor protein MotA, conserved site BER92_RS09575 IPR008490 Transposase InsH, N-terminal BER92_RS09680 IPR035903 HesB-like domain superfamily BER92_RS09680 IPR017726 Fe/S biogenesis protein NfuA BER92_RS09680 IPR034904 Fe-S cluster assembly domain superfamily BER92_RS09680 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal BER92_RS09685 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily BER92_RS09685 IPR001533 Pterin 4 alpha carbinolamine dehydratase BER92_RS09695 IPR009057 Homeobox-like domain superfamily BER92_RS09695 IPR002514 Transposase IS3/IS911family BER92_RS09705 IPR023498 Zinc transporter ZupT BER92_RS09705 IPR003689 Zinc/iron permease BER92_RS09720 IPR036986 RNA-binding S4 domain superfamily BER92_RS09720 IPR002942 RNA-binding S4 domain BER92_RS09720 IPR006225 Pseudouridine synthase, RluC/RluD BER92_RS09720 IPR020103 Pseudouridine synthase, catalytic domain superfamily BER92_RS09720 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site BER92_RS09720 IPR006145 Pseudouridine synthase, RsuA/RluA BER92_RS09725 IPR004659 Ribonuclease E/G BER92_RS09725 IPR022967 RNA-binding domain, S1 BER92_RS09725 IPR028878 Ribonuclease E BER92_RS09725 IPR003029 S1 domain BER92_RS09725 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G BER92_RS09725 IPR012340 Nucleic acid-binding, OB-fold BER92_RS09725 IPR021968 Polyribonucleotide phosphorylase C-terminal BER92_RS09735 IPR000792 Transcription regulator LuxR, C-terminal BER92_RS09735 IPR001789 Signal transduction response regulator, receiver domain BER92_RS09735 IPR016032 Signal transduction response regulator, C-terminal effector BER92_RS09735 IPR011006 CheY-like superfamily BER92_RS09740 IPR001763 Rhodanese-like domain BER92_RS09740 IPR036873 Rhodanese-like domain superfamily BER92_RS09740 IPR020936 Uncharacterised protein family UPF0176 BER92_RS09740 IPR040503 UPF0176, acylphosphatase-like domain BER92_RS09750 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BER92_RS09760 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BER92_RS09760 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal BER92_RS09760 IPR036291 NAD(P)-binding domain superfamily BER92_RS09760 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily BER92_RS09760 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation BER92_RS09760 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal BER92_RS09760 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase BER92_RS09760 IPR017476 UDP-glucose/GDP-mannose dehydrogenase BER92_RS09770 IPR008490 Transposase InsH, N-terminal BER92_RS09770 IPR002559 Transposase, IS4-like BER92_RS09780 IPR002514 Transposase IS3/IS911family BER92_RS09780 IPR009057 Homeobox-like domain superfamily BER92_RS09785 IPR012337 Ribonuclease H-like superfamily BER92_RS09785 IPR036397 Ribonuclease H superfamily BER92_RS09785 IPR025948 HTH-like domain BER92_RS09785 IPR001584 Integrase, catalytic core BER92_RS09790 IPR036397 Ribonuclease H superfamily BER92_RS09790 IPR012337 Ribonuclease H-like superfamily BER92_RS09790 IPR001584 Integrase, catalytic core BER92_RS09790 IPR025948 HTH-like domain BER92_RS09820 IPR006531 Gp5 N-terminal BER92_RS09820 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BER92_RS09820 IPR037026 Vgr protein, OB-fold domain superfamily BER92_RS09820 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BER92_RS09830 IPR036628 Clp, N-terminal domain superfamily BER92_RS09830 IPR001270 ClpA/B family BER92_RS09830 IPR019489 Clp ATPase, C-terminal BER92_RS09830 IPR017729 Type VI secretion system, ATPase ClpV1 BER92_RS09830 IPR003593 AAA+ ATPase domain BER92_RS09830 IPR018368 ClpA/B, conserved site 1 BER92_RS09830 IPR004176 Clp, N-terminal BER92_RS09830 IPR003959 ATPase, AAA-type, core BER92_RS09830 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS09830 IPR041546 ClpA/ClpB, AAA lid domain BER92_RS09840 IPR010272 Type VI secretion system, TssF-like BER92_RS09855 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath BER92_RS09860 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 BER92_RS09885 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BER92_RS09885 IPR006531 Gp5 N-terminal BER92_RS09885 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain BER92_RS09885 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BER92_RS09885 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal BER92_RS09885 IPR037026 Vgr protein, OB-fold domain superfamily BER92_RS09910 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal BER92_RS09910 IPR006531 Gp5 N-terminal BER92_RS09910 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain BER92_RS09910 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BER92_RS09910 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BER92_RS09910 IPR037026 Vgr protein, OB-fold domain superfamily BER92_RS09950 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal BER92_RS09950 IPR006531 Gp5 N-terminal BER92_RS09950 IPR037026 Vgr protein, OB-fold domain superfamily BER92_RS09950 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain BER92_RS09950 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BER92_RS09950 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BER92_RS09955 IPR002514 Transposase IS3/IS911family BER92_RS09955 IPR009057 Homeobox-like domain superfamily BER92_RS09975 IPR006315 Outer membrane autotransporter barrel BER92_RS09975 IPR013425 Autotransporter-associated beta strand repeat BER92_RS09975 IPR036709 Autotransporter beta-domain superfamily BER92_RS09975 IPR005546 Autotransporter beta-domain BER92_RS09975 IPR011050 Pectin lyase fold/virulence factor BER92_RS09975 IPR012332 P22 tailspike-like, C-terminal domain superfamily BER92_RS09975 IPR011050 Pectin lyase fold/virulence factor BER92_RS09975 IPR012332 P22 tailspike-like, C-terminal domain superfamily BER92_RS09975 IPR006315 Outer membrane autotransporter barrel BER92_RS09975 IPR013425 Autotransporter-associated beta strand repeat BER92_RS09975 IPR036709 Autotransporter beta-domain superfamily BER92_RS09975 IPR005546 Autotransporter beta-domain BER92_RS09995 IPR009078 Ferritin-like superfamily BER92_RS09995 IPR012347 Ferritin-like BER92_RS09995 IPR010287 Domain of unknown function DUF892 BER92_RS10010 IPR008490 Transposase InsH, N-terminal BER92_RS10010 IPR002559 Transposase, IS4-like BER92_RS10020 IPR000878 Tetrapyrrole methylase BER92_RS10020 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BER92_RS10020 IPR006367 Sirohaem synthase, N-terminal BER92_RS10020 IPR019478 Sirohaem synthase, dimerisation domain BER92_RS10020 IPR028281 Siroheme synthase, central domain BER92_RS10020 IPR012409 Sirohaem synthase BER92_RS10020 IPR014776 Tetrapyrrole methylase, subdomain 2 BER92_RS10020 IPR006366 Uroporphyrin-III C-methyltransferase BER92_RS10020 IPR014777 Tetrapyrrole methylase, subdomain 1 BER92_RS10020 IPR035996 Tetrapyrrole methylase superfamily BER92_RS10020 IPR036291 NAD(P)-binding domain superfamily BER92_RS10030 IPR013482 Molybdenum cofactor guanylyltransferase BER92_RS10030 IPR025877 MobA-like NTP transferase BER92_RS10030 IPR029044 Nucleotide-diphospho-sugar transferases BER92_RS10035 IPR036425 MoaB/Mog-like domain superfamily BER92_RS10035 IPR005110 MoeA, N-terminal and linker domain BER92_RS10035 IPR036688 MoeA, C-terminal, domain IV superfamily BER92_RS10035 IPR005111 MoeA, C-terminal, domain IV BER92_RS10035 IPR038987 Molybdopterin biosynthesis protein MoeA-like BER92_RS10035 IPR008284 Molybdenum cofactor biosynthesis, conserved site BER92_RS10035 IPR001453 MoaB/Mog domain BER92_RS10035 IPR036135 MoeA, N-terminal and linker domain superfamily BER92_RS10055 IPR035985 Ubiquitin-activating enzyme BER92_RS10055 IPR000594 THIF-type NAD/FAD binding fold BER92_RS10060 IPR036425 MoaB/Mog-like domain superfamily BER92_RS10060 IPR001453 MoaB/Mog domain BER92_RS10060 IPR038987 Molybdopterin biosynthesis protein MoeA-like BER92_RS10060 IPR005111 MoeA, C-terminal, domain IV BER92_RS10060 IPR036688 MoeA, C-terminal, domain IV superfamily BER92_RS10060 IPR005110 MoeA, N-terminal and linker domain BER92_RS10060 IPR036135 MoeA, N-terminal and linker domain superfamily BER92_RS10060 IPR008284 Molybdenum cofactor biosynthesis, conserved site BER92_RS10065 IPR005225 Small GTP-binding protein domain BER92_RS10065 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS10065 IPR015946 K homology domain-like, alpha/beta BER92_RS10065 IPR032859 GTPase Der, C-terminal KH-domain-like BER92_RS10065 IPR006073 GTP binding domain BER92_RS10065 IPR016484 GTP-binding protein EngA BER92_RS10065 IPR031166 EngA-type guanine nucleotide-binding (G) domain BER92_RS10065 IPR003593 AAA+ ATPase domain BER92_RS10070 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BER92_RS10070 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat BER92_RS10070 IPR017687 Outer membrane protein assembly factor BamB BER92_RS10070 IPR015943 WD40/YVTN repeat-like-containing domain superfamily BER92_RS10070 IPR002372 Pyrrolo-quinoline quinone repeat BER92_RS10090 IPR007197 Radical SAM BER92_RS10090 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr BER92_RS10090 IPR027492 Dual-specificity RNA methyltransferase RlmN BER92_RS10090 IPR013785 Aldolase-type TIM barrel BER92_RS10090 IPR040072 Methyltransferase (Class A) BER92_RS10095 IPR023005 Nucleoside diphosphate kinase, active site BER92_RS10095 IPR034907 Nucleoside diphosphate kinase-like domain BER92_RS10095 IPR036850 Nucleoside diphosphate kinase-like domain superfamily BER92_RS10095 IPR001564 Nucleoside diphosphate kinase BER92_RS10105 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal BER92_RS10105 IPR036291 NAD(P)-binding domain superfamily BER92_RS10105 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BER92_RS10105 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding BER92_RS10105 IPR013328 6-phosphogluconate dehydrogenase, domain 2 BER92_RS10105 IPR001753 Enoyl-CoA hydratase/isomerase BER92_RS10105 IPR029045 ClpP/crotonase-like domain superfamily BER92_RS10110 IPR020610 Thiolase, active site BER92_RS10110 IPR020615 Thiolase, acyl-enzyme intermediate active site BER92_RS10110 IPR016039 Thiolase-like BER92_RS10110 IPR002155 Thiolase BER92_RS10110 IPR020613 Thiolase, conserved site BER92_RS10110 IPR020617 Thiolase, C-terminal BER92_RS10110 IPR020616 Thiolase, N-terminal BER92_RS10115 IPR014743 Chloride channel, core BER92_RS10115 IPR001807 Chloride channel, voltage gated BER92_RS10120 IPR008490 Transposase InsH, N-terminal BER92_RS10125 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BER92_RS10125 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS10125 IPR003593 AAA+ ATPase domain BER92_RS10125 IPR032423 AAA C-terminal domain BER92_RS10125 IPR021886 MgsA AAA+ ATPase C-terminal BER92_RS10125 IPR003959 ATPase, AAA-type, core BER92_RS10130 IPR029046 Lipoprotein localisation LolA/LolB/LppX BER92_RS10130 IPR004564 Outer membrane lipoprotein carrier protein LolA-like BER92_RS10130 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria BER92_RS10140 IPR041027 FtsK alpha domain BER92_RS10140 IPR002543 FtsK domain BER92_RS10140 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS10140 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS10140 IPR025199 DNA translocase FtsK, 4TM region BER92_RS10140 IPR003593 AAA+ ATPase domain BER92_RS10140 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS10140 IPR018541 FtsK gamma domain BER92_RS10145 IPR005982 Thioredoxin reductase BER92_RS10145 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site BER92_RS10145 IPR023753 FAD/NAD(P)-binding domain BER92_RS10145 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS10155 IPR016181 Acyl-CoA N-acyltransferase BER92_RS10155 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase BER92_RS10155 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal BER92_RS10160 IPR012340 Nucleic acid-binding, OB-fold BER92_RS10160 IPR006196 RNA-binding domain, S1, IF1 type BER92_RS10160 IPR022967 RNA-binding domain, S1 BER92_RS10160 IPR004368 Translation initiation factor IF-1 BER92_RS10165 IPR028299 ClpA/B, conserved site 2 BER92_RS10165 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS10165 IPR001270 ClpA/B family BER92_RS10165 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA BER92_RS10165 IPR004176 Clp, N-terminal BER92_RS10165 IPR041546 ClpA/ClpB, AAA lid domain BER92_RS10165 IPR018368 ClpA/B, conserved site 1 BER92_RS10165 IPR003959 ATPase, AAA-type, core BER92_RS10165 IPR019489 Clp ATPase, C-terminal BER92_RS10165 IPR003593 AAA+ ATPase domain BER92_RS10165 IPR036628 Clp, N-terminal domain superfamily BER92_RS10170 IPR022935 ATP-dependent Clp protease adaptor protein ClpS BER92_RS10170 IPR003769 Adaptor protein ClpS, core BER92_RS10170 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BER92_RS10175 IPR015797 NUDIX hydrolase-like domain superfamily BER92_RS10175 IPR020084 NUDIX hydrolase, conserved site BER92_RS10175 IPR033713 Phosphatase NudJ BER92_RS10175 IPR000086 NUDIX hydrolase domain BER92_RS10175 IPR020476 NUDIX hydrolase BER92_RS10180 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS10180 IPR023382 Adenine nucleotide alpha hydrolase-like domains BER92_RS10180 IPR004506 tRNA-specific 2-thiouridylase BER92_RS10185 IPR007451 High frequency lysogenization protein HflD BER92_RS10185 IPR035932 HflD-like superfamily BER92_RS10190 IPR004090 Chemotaxis methyl-accepting receptor BER92_RS10190 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BER92_RS10190 IPR000727 Target SNARE coiled-coil homology domain BER92_RS10190 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain BER92_RS10190 IPR003660 HAMP domain BER92_RS10210 IPR005467 Histidine kinase domain BER92_RS10210 IPR003018 GAF domain BER92_RS10210 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS10210 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS10210 IPR029016 GAF-like domain superfamily BER92_RS10210 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BER92_RS10215 IPR005330 MHYT domain BER92_RS10215 IPR000160 GGDEF domain BER92_RS10215 IPR029787 Nucleotide cyclase BER92_RS10215 IPR001633 EAL domain BER92_RS10215 IPR035919 EAL domain superfamily BER92_RS10220 IPR005467 Histidine kinase domain BER92_RS10220 IPR013767 PAS fold BER92_RS10220 IPR035965 PAS domain superfamily BER92_RS10220 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS10220 IPR000014 PAS domain BER92_RS10220 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS10220 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS10220 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS10220 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS10240 IPR024181 Chemotaxis response regulator CheV BER92_RS10240 IPR036061 CheW-like domain superfamily BER92_RS10240 IPR011006 CheY-like superfamily BER92_RS10240 IPR002545 CheW-like domain BER92_RS10240 IPR001789 Signal transduction response regulator, receiver domain BER92_RS10245 IPR019776 Flagellar basal body rod protein, conserved site BER92_RS10245 IPR001444 Flagellar basal body rod protein, N-terminal BER92_RS10245 IPR006300 Flagellar basal-body rod protein FlgB BER92_RS10250 IPR006299 Flagellar basal-body rod protein FlgC BER92_RS10250 IPR019776 Flagellar basal body rod protein, conserved site BER92_RS10250 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BER92_RS10250 IPR001444 Flagellar basal body rod protein, N-terminal BER92_RS10255 IPR005648 Flagellar hook capping protein BER92_RS10260 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BER92_RS10260 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BER92_RS10260 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BER92_RS10260 IPR019776 Flagellar basal body rod protein, conserved site BER92_RS10260 IPR001444 Flagellar basal body rod protein, N-terminal BER92_RS10260 IPR011491 Flagellar hook protein FlgE BER92_RS10260 IPR037058 Flagellar hook protein FlgE superfamily BER92_RS10265 IPR019776 Flagellar basal body rod protein, conserved site BER92_RS10265 IPR001444 Flagellar basal body rod protein, N-terminal BER92_RS10265 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BER92_RS10265 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BER92_RS10265 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BER92_RS10270 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BER92_RS10270 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BER92_RS10270 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BER92_RS10270 IPR019776 Flagellar basal body rod protein, conserved site BER92_RS10270 IPR001444 Flagellar basal body rod protein, N-terminal BER92_RS10270 IPR012834 Flagellar basal-body rod FlgG BER92_RS10275 IPR000527 Flagellar L-ring protein BER92_RS10280 IPR001782 Flagellar P-ring protein BER92_RS10285 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain BER92_RS10285 IPR023346 Lysozyme-like domain superfamily BER92_RS10285 IPR013377 Peptidoglycan hydrolase FlgJ BER92_RS10285 IPR019301 Flagellar protein FlgJ, N-terminal BER92_RS10290 IPR002371 Flagellar hook-associated protein 1 BER92_RS10290 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BER92_RS10290 IPR010810 Flagellin hook, IN motif BER92_RS10295 IPR013384 Flagellar hook-associated protein 3 BER92_RS10295 IPR001029 Flagellin, D0/D1 domain BER92_RS10300 IPR001029 Flagellin, D0/D1 domain BER92_RS10300 IPR001492 Flagellin BER92_RS10305 IPR010809 Flagellar hook-associated protein 2, C-terminal BER92_RS10305 IPR040026 Flagellar hook-associated protein 2 BER92_RS10305 IPR010810 Flagellin hook, IN motif BER92_RS10305 IPR003481 Flagellar hook-associated protein 2, N-terminal BER92_RS10310 IPR036584 Flagellar protein FliS superfamily BER92_RS10310 IPR003713 Flagellar protein FliS BER92_RS10325 IPR016032 Signal transduction response regulator, C-terminal effector BER92_RS10325 IPR011006 CheY-like superfamily BER92_RS10325 IPR000792 Transcription regulator LuxR, C-terminal BER92_RS10325 IPR001789 Signal transduction response regulator, receiver domain BER92_RS10330 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily BER92_RS10330 IPR007634 RNA polymerase sigma factor 54, DNA-binding BER92_RS10330 IPR007046 RNA polymerase sigma factor 54, core-binding domain BER92_RS10330 IPR000394 RNA polymerase sigma factor 54 BER92_RS10335 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase BER92_RS10335 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type BER92_RS10335 IPR035909 Methylesterase CheB, C-terminal BER92_RS10335 IPR011006 CheY-like superfamily BER92_RS10335 IPR001789 Signal transduction response regulator, receiver domain BER92_RS10340 IPR025944 Sigma-54 interaction domain, conserved site BER92_RS10340 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BER92_RS10340 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BER92_RS10340 IPR002078 RNA polymerase sigma factor 54 interaction domain BER92_RS10340 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS10340 IPR002197 DNA binding HTH domain, Fis-type BER92_RS10340 IPR009057 Homeobox-like domain superfamily BER92_RS10340 IPR010518 Flagellar regulatory FleQ BER92_RS10340 IPR011006 CheY-like superfamily BER92_RS10340 IPR003593 AAA+ ATPase domain BER92_RS10350 IPR001173 Glycosyltransferase 2-like BER92_RS10350 IPR001296 Glycosyl transferase, family 1 BER92_RS10350 IPR029044 Nucleotide-diphospho-sugar transferases BER92_RS10360 IPR001624 Flagellar hook-basal body complex protein FliE BER92_RS10365 IPR000067 Flagellar M-ring protein FliF BER92_RS10365 IPR013556 Flagellar M-ring C-terminal BER92_RS10365 IPR006182 Secretory protein YscJ/FliF BER92_RS10370 IPR000090 Flagellar motor switch protein FliG BER92_RS10370 IPR023087 Flagellar motor switch protein FliG, C-terminal BER92_RS10370 IPR011002 Flagellar motor switch protein FliG, alpha-helical BER92_RS10370 IPR032779 Flagellar motor switch protein FliG, middle domain BER92_RS10370 IPR028263 Flagellar motor switch protein FliG, N-terminal domain BER92_RS10380 IPR005714 ATPase, type III secretion system, FliI/YscN BER92_RS10380 IPR032463 ATPase, type III secretion system, FliI BER92_RS10380 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BER92_RS10380 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BER92_RS10380 IPR003593 AAA+ ATPase domain BER92_RS10380 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS10380 IPR020005 Flagellar export ATPase FliI, clade 1 BER92_RS10380 IPR040627 T3SS EscN ATPase, C-terminal BER92_RS10400 IPR001689 Flagellar motor switch protein FliM BER92_RS10400 IPR028976 CheC-like superfamily BER92_RS10400 IPR001543 Surface presentation of antigen (SpoA) BER92_RS10400 IPR036429 SpoA-like superfamily BER92_RS10405 IPR001543 Surface presentation of antigen (SpoA) BER92_RS10405 IPR036429 SpoA-like superfamily BER92_RS10405 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb BER92_RS10405 IPR012826 Flagellar motor switch FliN BER92_RS10410 IPR022781 Flagellar biosynthesis protein, FliO BER92_RS10415 IPR005838 Type III secretion system inner membrane P protein BER92_RS10415 IPR005837 Flagellar transport protein FliP BER92_RS10420 IPR006305 Flagellar biosynthesis protein FliQ BER92_RS10420 IPR002191 Bacterial export protein family 3 BER92_RS10425 IPR006303 Flagellar biosynthesis protein FliR BER92_RS10425 IPR002010 Type III secretion system inner membrane R protein BER92_RS10435 IPR000160 GGDEF domain BER92_RS10435 IPR000014 PAS domain BER92_RS10435 IPR035965 PAS domain superfamily BER92_RS10435 IPR005330 MHYT domain BER92_RS10435 IPR035919 EAL domain superfamily BER92_RS10435 IPR001633 EAL domain BER92_RS10435 IPR029787 Nucleotide cyclase BER92_RS10440 IPR029787 Nucleotide cyclase BER92_RS10440 IPR000160 GGDEF domain BER92_RS10445 IPR006136 Flagellar biosynthetic protein FlhB BER92_RS10445 IPR006135 Type III secretion system substrate exporter BER92_RS10445 IPR029025 Type III secretion system substrate exporter, C-terminal BER92_RS10450 IPR042193 FHIPEP, domain 3 BER92_RS10450 IPR001712 Type III secretion system FHIPEP BER92_RS10450 IPR006301 Flagellar biosynthesis protein FlhA BER92_RS10450 IPR042194 FHIPEP, domain 1 BER92_RS10450 IPR025505 FHIPEP conserved site BER92_RS10450 IPR042196 FHIPEP, domain 4 BER92_RS10455 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain BER92_RS10455 IPR003593 AAA+ ATPase domain BER92_RS10455 IPR020006 Flagellar biosynthesis protein FlhF BER92_RS10455 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS10460 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS10460 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 BER92_RS10460 IPR025501 ATP binding protein MinD BER92_RS10465 IPR000943 RNA polymerase sigma-70 BER92_RS10465 IPR007627 RNA polymerase sigma-70 region 2 BER92_RS10465 IPR014284 RNA polymerase sigma-70 like domain BER92_RS10465 IPR007624 RNA polymerase sigma-70 region 3 BER92_RS10465 IPR007630 RNA polymerase sigma-70 region 4 BER92_RS10465 IPR012845 RNA polymerase sigma factor, FliA/WhiG BER92_RS10465 IPR013325 RNA polymerase sigma factor, region 2 BER92_RS10465 IPR013324 RNA polymerase sigma factor, region 3/4-like BER92_RS10465 IPR028617 RNA polymerase sigma factor FliA BER92_RS10470 IPR001789 Signal transduction response regulator, receiver domain BER92_RS10470 IPR011006 CheY-like superfamily BER92_RS10475 IPR007439 Chemotaxis phosphatase, CheZ BER92_RS10480 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS10480 IPR001789 Signal transduction response regulator, receiver domain BER92_RS10480 IPR036641 HPT domain superfamily BER92_RS10480 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS10480 IPR005467 Histidine kinase domain BER92_RS10480 IPR011006 CheY-like superfamily BER92_RS10480 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BER92_RS10480 IPR002545 CheW-like domain BER92_RS10480 IPR036061 CheW-like domain superfamily BER92_RS10480 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily BER92_RS10480 IPR004105 Histidine kinase CheA-like, homodimeric domain BER92_RS10480 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS10480 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS10535 IPR002559 Transposase, IS4-like BER92_RS10545 IPR034061 Autotransporter serine protease peptidase domain BER92_RS10545 IPR036852 Peptidase S8/S53 domain superfamily BER92_RS10545 IPR000209 Peptidase S8/S53 domain BER92_RS10545 IPR015500 Peptidase S8, subtilisin-related BER92_RS10545 IPR036709 Autotransporter beta-domain superfamily BER92_RS10545 IPR023828 Peptidase S8, subtilisin, Ser-active site BER92_RS10545 IPR005546 Autotransporter beta-domain BER92_RS10550 IPR001036 Acriflavin resistance protein BER92_RS10550 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA BER92_RS10550 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BER92_RS10560 IPR009057 Homeobox-like domain superfamily BER92_RS10560 IPR002514 Transposase IS3/IS911family BER92_RS10575 IPR002559 Transposase, IS4-like BER92_RS10585 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site BER92_RS10585 IPR029144 Threonine synthase, N-terminal BER92_RS10585 IPR037158 Threonine synthase, N-terminal domain superfamily BER92_RS10585 IPR004450 Threonine synthase-like BER92_RS10585 IPR001926 Pyridoxal-phosphate dependent enzyme BER92_RS10585 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BER92_RS10595 IPR011118 Tannase/feruloyl esterase BER92_RS10595 IPR029058 Alpha/Beta hydrolase fold BER92_RS10600 IPR008490 Transposase InsH, N-terminal BER92_RS10605 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BER92_RS10605 IPR000870 Homoserine kinase BER92_RS10605 IPR006204 GHMP kinase N-terminal domain BER92_RS10605 IPR013750 GHMP kinase, C-terminal domain BER92_RS10605 IPR020568 Ribosomal protein S5 domain 2-type fold BER92_RS10605 IPR036554 GHMP kinase, C-terminal domain superfamily BER92_RS10610 IPR019811 Homoserine dehydrogenase, conserved site BER92_RS10610 IPR001342 Homoserine dehydrogenase, catalytic BER92_RS10610 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding BER92_RS10610 IPR001048 Aspartate/glutamate/uridylate kinase BER92_RS10610 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain BER92_RS10610 IPR002912 ACT domain BER92_RS10610 IPR027795 CASTOR, ACT domain BER92_RS10610 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I BER92_RS10610 IPR036291 NAD(P)-binding domain superfamily BER92_RS10610 IPR036393 Acetylglutamate kinase-like superfamily BER92_RS10610 IPR001341 Aspartate kinase BER92_RS10610 IPR018042 Aspartate kinase, conserved site BER92_RS10615 IPR038330 TspO/MBR-related superfamily BER92_RS10615 IPR004307 TspO/MBR-related protein BER92_RS10620 IPR002514 Transposase IS3/IS911family BER92_RS10620 IPR009057 Homeobox-like domain superfamily BER92_RS10630 IPR002559 Transposase, IS4-like BER92_RS10630 IPR008490 Transposase InsH, N-terminal BER92_RS10650 IPR041679 DNA2/NAM7 helicase-like, AAA domain BER92_RS10650 IPR041677 DNA2/NAM7 helicase, AAA domain BER92_RS10650 IPR025103 Protein of unknown function DUF4011 BER92_RS10650 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS10660 IPR041677 DNA2/NAM7 helicase, AAA domain BER92_RS10660 IPR041679 DNA2/NAM7 helicase-like, AAA domain BER92_RS10660 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS10660 IPR025103 Protein of unknown function DUF4011 BER92_RS10665 IPR025948 HTH-like domain BER92_RS10665 IPR001584 Integrase, catalytic core BER92_RS10665 IPR012337 Ribonuclease H-like superfamily BER92_RS10665 IPR036397 Ribonuclease H superfamily BER92_RS10670 IPR002514 Transposase IS3/IS911family BER92_RS10670 IPR009057 Homeobox-like domain superfamily BER92_RS10675 IPR016161 Aldehyde/histidinol dehydrogenase BER92_RS10675 IPR016162 Aldehyde dehydrogenase, N-terminal BER92_RS10675 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BER92_RS10675 IPR016160 Aldehyde dehydrogenase, cysteine active site BER92_RS10675 IPR016163 Aldehyde dehydrogenase, C-terminal BER92_RS10675 IPR015590 Aldehyde dehydrogenase domain BER92_RS10690 IPR013785 Aldolase-type TIM barrel BER92_RS10690 IPR005720 Dihydroorotate dehydrogenase domain BER92_RS10690 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 BER92_RS10690 IPR005719 Dihydroorotate dehydrogenase, class 2 BER92_RS10690 IPR001295 Dihydroorotate dehydrogenase, conserved site BER92_RS10695 IPR016169 FAD-binding, type PCMH, subdomain 2 BER92_RS10695 IPR016167 FAD-binding, type PCMH, subdomain 1 BER92_RS10695 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase BER92_RS10695 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal BER92_RS10695 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily BER92_RS10695 IPR006094 FAD linked oxidase, N-terminal BER92_RS10695 IPR036318 FAD-binding, type PCMH-like superfamily BER92_RS10695 IPR016166 FAD-binding domain, PCMH-type BER92_RS10705 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BER92_RS10705 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BER92_RS10710 IPR011005 Dihydropteroate synthase-like BER92_RS10710 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial BER92_RS10710 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type BER92_RS10720 IPR011006 CheY-like superfamily BER92_RS10720 IPR002197 DNA binding HTH domain, Fis-type BER92_RS10720 IPR001789 Signal transduction response regulator, receiver domain BER92_RS10730 IPR001633 EAL domain BER92_RS10730 IPR013515 Phytochrome, central region BER92_RS10730 IPR029787 Nucleotide cyclase BER92_RS10730 IPR001294 Phytochrome BER92_RS10730 IPR000160 GGDEF domain BER92_RS10730 IPR016132 Phytochrome chromophore attachment domain BER92_RS10730 IPR035919 EAL domain superfamily BER92_RS10730 IPR003018 GAF domain BER92_RS10730 IPR029016 GAF-like domain superfamily BER92_RS10750 IPR008490 Transposase InsH, N-terminal BER92_RS10750 IPR002559 Transposase, IS4-like BER92_RS10770 IPR018212 Sodium/solute symporter, conserved site BER92_RS10770 IPR038377 Sodium/glucose symporter superfamily BER92_RS10770 IPR001734 Sodium/solute symporter BER92_RS10775 IPR013783 Immunoglobulin-like fold BER92_RS10775 IPR011658 PA14 domain BER92_RS10775 IPR037524 PA14/GLEYA domain BER92_RS10775 IPR017853 Glycoside hydrolase superfamily BER92_RS10775 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily BER92_RS10775 IPR002772 Glycoside hydrolase family 3 C-terminal domain BER92_RS10775 IPR001764 Glycoside hydrolase, family 3, N-terminal BER92_RS10775 IPR026891 Fibronectin type III-like domain BER92_RS10775 IPR008979 Galactose-binding-like domain superfamily BER92_RS10775 IPR019800 Glycoside hydrolase, family 3, active site BER92_RS10775 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily BER92_RS10820 IPR035476 Phosphoglucose isomerase, SIS domain 1 BER92_RS10820 IPR018189 Phosphoglucose isomerase, conserved site BER92_RS10820 IPR023096 Phosphoglucose isomerase, C-terminal BER92_RS10820 IPR035482 Phosphoglucose isomerase, SIS domain 2 BER92_RS10820 IPR001672 Phosphoglucose isomerase (PGI) BER92_RS10825 IPR009010 Aspartate decarboxylase-like domain superfamily BER92_RS10825 IPR003190 Aspartate decarboxylase BER92_RS10830 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS10830 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain BER92_RS10830 IPR003721 Pantoate-beta-alanine ligase BER92_RS10835 IPR040442 Pyruvate kinase-like domain superfamily BER92_RS10835 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BER92_RS10835 IPR003700 Ketopantoate hydroxymethyltransferase BER92_RS10840 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily BER92_RS10840 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK BER92_RS10845 IPR025866 Polymerase A arginine-rich C-terminal domain BER92_RS10845 IPR010206 Poly(A) polymerase I BER92_RS10845 IPR002646 Poly A polymerase, head domain BER92_RS10845 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain BER92_RS10855 IPR022838 GTP cyclohydrolase FolE2 BER92_RS10855 IPR003801 GTP cyclohydrolase FolE2/MptA BER92_RS10860 IPR005829 Sugar transporter, conserved site BER92_RS10860 IPR003663 Sugar/inositol transporter BER92_RS10860 IPR036259 MFS transporter superfamily BER92_RS10860 IPR020846 Major facilitator superfamily domain BER92_RS10860 IPR005828 Major facilitator, sugar transporter-like BER92_RS10865 IPR001998 Xylose isomerase BER92_RS10865 IPR013452 Xylose isomerase, bacterial-type BER92_RS10865 IPR036237 Xylose isomerase-like superfamily BER92_RS10870 IPR018484 Carbohydrate kinase, FGGY, N-terminal BER92_RS10870 IPR000577 Carbohydrate kinase, FGGY BER92_RS10870 IPR018485 Carbohydrate kinase, FGGY, C-terminal BER92_RS10870 IPR006000 Xylulokinase BER92_RS10870 IPR018483 Carbohydrate kinase, FGGY, conserved site BER92_RS10880 IPR017853 Glycoside hydrolase superfamily BER92_RS10880 IPR013780 Glycosyl hydrolase, all-beta BER92_RS10880 IPR000322 Glycoside hydrolase family 31 BER92_RS10880 IPR037524 PA14/GLEYA domain BER92_RS10880 IPR011013 Galactose mutarotase-like domain superfamily BER92_RS10880 IPR033403 Domain of unknown function DUF5110 BER92_RS10880 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 BER92_RS10900 IPR008490 Transposase InsH, N-terminal BER92_RS10925 IPR005119 LysR, substrate-binding BER92_RS10925 IPR037405 HTH-type transcriptional regulator GbpR, PBP2 domain BER92_RS10925 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS10925 IPR000847 Transcription regulator HTH, LysR BER92_RS10925 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS10930 IPR013785 Aldolase-type TIM barrel BER92_RS10930 IPR000887 KDPG/KHG aldolase BER92_RS10935 IPR036849 Enolase-like, C-terminal domain superfamily BER92_RS10935 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site BER92_RS10935 IPR034593 Mandelate racemase-like BER92_RS10935 IPR029017 Enolase-like, N-terminal BER92_RS10935 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BER92_RS10935 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BER92_RS10935 IPR023592 D-galactonate dehydratase BER92_RS10935 IPR029065 Enolase C-terminal domain-like BER92_RS10940 IPR005511 Senescence marker protein-30 (SMP-30) BER92_RS10940 IPR013658 SMP-30/Gluconolactonase/LRE-like region BER92_RS10940 IPR011042 Six-bladed beta-propeller, TolB-like BER92_RS10945 IPR007729 2-keto-3-deoxy-galactonokinase BER92_RS10945 IPR042257 2-keto-3-deoxy-galactonokinase, C-terminal domain BER92_RS10945 IPR042258 2-keto-3-deoxy-galactonokinase, N-terminal BER92_RS10950 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BER92_RS10950 IPR000813 7Fe ferredoxin BER92_RS10950 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BER92_RS10950 IPR022569 Ferredoxin, C-terminal BER92_RS10960 IPR020624 Schiff base-forming aldolase, conserved site BER92_RS10960 IPR020625 Schiff base-forming aldolase, active site BER92_RS10960 IPR002220 DapA-like BER92_RS10960 IPR013785 Aldolase-type TIM barrel BER92_RS10960 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA BER92_RS10975 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant BER92_RS10975 IPR013766 Thioredoxin domain BER92_RS10975 IPR036249 Thioredoxin-like superfamily BER92_RS10980 IPR002716 PIN domain BER92_RS10980 IPR029060 PIN-like domain superfamily BER92_RS10980 IPR003714 PhoH-like protein BER92_RS10980 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS10990 IPR034291 Thiamine phosphate synthase BER92_RS10990 IPR022998 Thiamine phosphate synthase/TenI BER92_RS10990 IPR036206 Thiamin phosphate synthase superfamily BER92_RS10990 IPR029056 Ribokinase-like BER92_RS10990 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase BER92_RS10990 IPR013785 Aldolase-type TIM barrel BER92_RS10990 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase BER92_RS11005 IPR005119 LysR, substrate-binding BER92_RS11005 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS11005 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS11005 IPR000847 Transcription regulator HTH, LysR BER92_RS11010 IPR012093 Pirin BER92_RS11010 IPR003829 Pirin, N-terminal domain BER92_RS11010 IPR014710 RmlC-like jelly roll fold BER92_RS11010 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain BER92_RS11010 IPR011051 RmlC-like cupin domain superfamily BER92_RS11030 IPR003751 Translational regulator CsrA BER92_RS11030 IPR036107 Carbon storage regulator superfamily BER92_RS11035 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily BER92_RS11035 IPR003156 DHHA1 domain BER92_RS11035 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria BER92_RS11035 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal BER92_RS11035 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily BER92_RS11035 IPR002318 Alanine-tRNA ligase, class IIc BER92_RS11035 IPR009000 Translation protein, beta-barrel domain superfamily BER92_RS11035 IPR012947 Threonyl/alanyl tRNA synthetase, SAD BER92_RS11035 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain BER92_RS11040 IPR003783 Regulatory protein RecX BER92_RS11040 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS11045 IPR003593 AAA+ ATPase domain BER92_RS11045 IPR013765 DNA recombination and repair protein RecA BER92_RS11045 IPR020584 DNA recombination/repair protein RecA, conserved site BER92_RS11045 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain BER92_RS11045 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface BER92_RS11045 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS11045 IPR023400 DNA recombination and repair protein RecA, C-terminal BER92_RS11050 IPR006197 Peptidase S24, LexA-like BER92_RS11050 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS11050 IPR015927 Peptidase S24/S26A/S26B/S26C BER92_RS11050 IPR036286 LexA/Signal peptidase-like superfamily BER92_RS11050 IPR006200 Transcription regulator LexA BER92_RS11050 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS11050 IPR039418 LexA-like BER92_RS11050 IPR006199 LexA repressor, DNA-binding domain BER92_RS11055 IPR010232 Probable protein kinase UbiB BER92_RS11055 IPR004147 UbiB domain BER92_RS11055 IPR011009 Protein kinase-like domain superfamily BER92_RS11105 IPR002514 Transposase IS3/IS911family BER92_RS11105 IPR009057 Homeobox-like domain superfamily BER92_RS11110 IPR025948 HTH-like domain BER92_RS11110 IPR012337 Ribonuclease H-like superfamily BER92_RS11110 IPR036397 Ribonuclease H superfamily BER92_RS11110 IPR001584 Integrase, catalytic core BER92_RS11115 IPR025948 HTH-like domain BER92_RS11115 IPR036397 Ribonuclease H superfamily BER92_RS11115 IPR012337 Ribonuclease H-like superfamily BER92_RS11115 IPR001584 Integrase, catalytic core BER92_RS11150 IPR000531 TonB-dependent receptor-like, beta-barrel BER92_RS11150 IPR039426 Vitamin B12 transporter BtuB-like BER92_RS11150 IPR010105 TonB-dependent siderophore receptor BER92_RS11150 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BER92_RS11150 IPR012910 TonB-dependent receptor, plug domain BER92_RS11155 IPR008136 CinA, C-terminal BER92_RS11155 IPR036653 CinA-like, C-terminal BER92_RS11165 IPR035647 EF-G domain III/V-like BER92_RS11165 IPR030394 HflX-type guanine nucleotide-binding (G) domain BER92_RS11165 IPR032305 GTP-binding protein, middle domain BER92_RS11165 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS11165 IPR025121 GTPase HflX, N-terminal BER92_RS11165 IPR042108 GTPase HflX, N-terminal domain superfamily BER92_RS11165 IPR016496 GTPase HflX BER92_RS11165 IPR006073 GTP binding domain BER92_RS11170 IPR010920 LSM domain superfamily BER92_RS11170 IPR005001 RNA-binding protein Hfq BER92_RS11175 IPR018022 IPP transferase BER92_RS11175 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS11175 IPR039657 Dimethylallyltransferase BER92_RS11180 IPR006390 Dihydropteroate synthase BER92_RS11180 IPR011005 Dihydropteroate synthase-like BER92_RS11180 IPR000489 Pterin-binding domain BER92_RS11185 IPR005936 Peptidase, FtsH BER92_RS11185 IPR003959 ATPase, AAA-type, core BER92_RS11185 IPR003593 AAA+ ATPase domain BER92_RS11185 IPR003960 ATPase, AAA-type, conserved site BER92_RS11185 IPR041569 AAA ATPase, AAA+ lid domain BER92_RS11185 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS11185 IPR011546 Peptidase M41, FtsH extracellular BER92_RS11185 IPR037219 Peptidase M41-like BER92_RS11185 IPR000642 Peptidase M41 BER92_RS11190 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS11190 IPR002877 Ribosomal RNA methyltransferase FtsJ domain BER92_RS11190 IPR015507 Ribosomal RNA large subunit methyltransferase E BER92_RS11195 IPR035920 YhbY-like superfamily BER92_RS11195 IPR017924 RNA-binding protein YhbY BER92_RS11195 IPR001890 RNA-binding, CRM domain BER92_RS11200 IPR036748 MTH938-like superfamily BER92_RS11200 IPR007523 NDUFAF3/Mth938 domain-containing protein BER92_RS11220 IPR002514 Transposase IS3/IS911family BER92_RS11220 IPR009057 Homeobox-like domain superfamily BER92_RS11305 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BER92_RS11305 IPR006531 Gp5 N-terminal BER92_RS11305 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain BER92_RS11305 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BER92_RS11305 IPR037026 Vgr protein, OB-fold domain superfamily BER92_RS11305 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal BER92_RS11310 IPR042095 Sulfatase-modifying factor enzyme superfamily BER92_RS11310 IPR005532 Sulfatase-modifying factor enzyme BER92_RS11310 IPR016187 C-type lectin fold BER92_RS11320 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BER92_RS11320 IPR006531 Gp5 N-terminal BER92_RS11320 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BER92_RS11320 IPR010609 Gp5, C-terminal BER92_RS11320 IPR037026 Vgr protein, OB-fold domain superfamily BER92_RS11335 IPR006690 Outer membrane protein, OmpA-like, conserved site BER92_RS11335 IPR007055 BON domain BER92_RS11335 IPR006664 Outer membrane protein, bacterial BER92_RS11335 IPR006665 OmpA-like domain BER92_RS11335 IPR036737 OmpA-like domain superfamily BER92_RS11345 IPR025743 IcmF-related, N-terminal domain BER92_RS11345 IPR009612 IcmF-related BER92_RS11345 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS11345 IPR010623 Type VI secretion system IcmF, C-terminal BER92_RS11345 IPR017731 Type VI secretion system, IcmF BER92_RS11410 IPR022385 Rhs repeat-associated core BER92_RS11410 IPR001826 RHS protein BER92_RS11420 IPR006531 Gp5 N-terminal BER92_RS11420 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BER92_RS11420 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BER92_RS11420 IPR037026 Vgr protein, OB-fold domain superfamily BER92_RS11425 IPR025161 Putative transposase IS4/IS5 family BER92_RS11430 IPR002559 Transposase, IS4-like BER92_RS11435 IPR002559 Transposase, IS4-like BER92_RS11435 IPR008490 Transposase InsH, N-terminal BER92_RS11475 IPR000462 CDP-alcohol phosphatidyltransferase BER92_RS11475 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase BER92_RS11475 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial BER92_RS11480 IPR038476 UvrC homology region 2 superfamily BER92_RS11480 IPR000305 GIY-YIG endonuclease BER92_RS11480 IPR035901 GIY-YIG endonuclease superfamily BER92_RS11480 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 BER92_RS11480 IPR010994 RuvA domain 2-like BER92_RS11480 IPR001943 UVR domain BER92_RS11480 IPR036876 UVR domain superfamily BER92_RS11480 IPR001162 UvrC family homology region BER92_RS11480 IPR004791 UvrABC system, subunit C BER92_RS11495 IPR003329 Acylneuraminate cytidylyltransferase BER92_RS11495 IPR029044 Nucleotide-diphospho-sugar transferases BER92_RS11495 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase BER92_RS11500 IPR003758 Tetraacyldisaccharide 4'-kinase BER92_RS11500 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS11505 IPR039421 Type I protein exporter BER92_RS11505 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS11505 IPR011917 ABC transporter, lipid A export, MsbA BER92_RS11505 IPR017871 ABC transporter, conserved site BER92_RS11505 IPR011527 ABC transporter type 1, transmembrane domain BER92_RS11505 IPR003439 ABC transporter-like BER92_RS11505 IPR036640 ABC transporter type 1, transmembrane domain superfamily BER92_RS11505 IPR003593 AAA+ ATPase domain BER92_RS11510 IPR003400 Biopolymer transport protein ExbD/TolR BER92_RS11515 IPR002898 MotA/TolQ/ExbB proton channel BER92_RS11520 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BER92_RS11520 IPR001279 Metallo-beta-lactamase BER92_RS11520 IPR004477 ComEC/Rec2-related protein BER92_RS11520 IPR035681 ComA-like, MBL domain BER92_RS11520 IPR004797 Competence protein ComEC/Rec2 BER92_RS11530 IPR003593 AAA+ ATPase domain BER92_RS11530 IPR015854 ABC transporter, lipoprotein release, LolD BER92_RS11530 IPR011924 Lipoprotein releasing system, ATP-binding protein BER92_RS11530 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS11530 IPR003439 ABC transporter-like BER92_RS11535 IPR025857 MacB-like periplasmic core domain BER92_RS11535 IPR003838 ABC transporter permease protein domain BER92_RS11535 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E BER92_RS11545 IPR036714 Flavinator of succinate dehydrogenase superfamily BER92_RS11545 IPR005631 Flavinator of succinate dehydrogenase BER92_RS11550 IPR036010 2Fe-2S ferredoxin-like superfamily BER92_RS11550 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BER92_RS11550 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site BER92_RS11550 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BER92_RS11550 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BER92_RS11550 IPR009051 Alpha-helical ferredoxin BER92_RS11550 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein BER92_RS11550 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal BER92_RS11550 IPR012675 Beta-grasp domain superfamily BER92_RS11560 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily BER92_RS11560 IPR011281 Succinate dehydrogenase, flavoprotein subunit BER92_RS11560 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily BER92_RS11560 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal BER92_RS11560 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain BER92_RS11560 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit BER92_RS11560 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS11560 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site BER92_RS11565 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor BER92_RS11565 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit BER92_RS11565 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit BER92_RS11570 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site BER92_RS11570 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit BER92_RS11570 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit BER92_RS11570 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit BER92_RS11575 IPR017703 YgfZ/GcvT conserved site BER92_RS11575 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal BER92_RS11575 IPR023758 tRNA-modifying protein YgfZ BER92_RS11580 IPR003439 ABC transporter-like BER92_RS11580 IPR017871 ABC transporter, conserved site BER92_RS11580 IPR003593 AAA+ ATPase domain BER92_RS11580 IPR008995 Molybdate/tungstate binding, C-terminal BER92_RS11580 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC BER92_RS11580 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS11580 IPR040582 MalK, OB fold domain BER92_RS11585 IPR019796 Glucose-6-phosphate dehydrogenase, active site BER92_RS11585 IPR036291 NAD(P)-binding domain superfamily BER92_RS11585 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding BER92_RS11585 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal BER92_RS11585 IPR001282 Glucose-6-phosphate dehydrogenase BER92_RS11590 IPR003836 Glucokinase BER92_RS11595 IPR037171 NagB/RpiA transferase-like BER92_RS11595 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase BER92_RS11595 IPR005900 6-phosphogluconolactonase, DevB-type BER92_RS11595 IPR039104 6-Phosphogluconolactonase BER92_RS11600 IPR004786 6-phosphogluconate dehydratase BER92_RS11600 IPR042096 Dihydroxy-acid dehydratase, C-terminal BER92_RS11600 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase BER92_RS11600 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site BER92_RS11600 IPR037237 IlvD/EDD, N-terminal domain BER92_RS11605 IPR000887 KDPG/KHG aldolase BER92_RS11605 IPR031338 KDPG/KHG aldolase, active site 2 BER92_RS11605 IPR013785 Aldolase-type TIM barrel BER92_RS11605 IPR031337 KDPG/KHG aldolase, active site 1 BER92_RS11620 IPR036909 Cytochrome c-like domain superfamily BER92_RS11620 IPR024167 Cytochrome c4-like BER92_RS11620 IPR009056 Cytochrome c-like domain BER92_RS11635 IPR008490 Transposase InsH, N-terminal BER92_RS11660 IPR001789 Signal transduction response regulator, receiver domain BER92_RS11660 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BER92_RS11660 IPR011006 CheY-like superfamily BER92_RS11660 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS11660 IPR005467 Histidine kinase domain BER92_RS11660 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS11660 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS11660 IPR036641 HPT domain superfamily BER92_RS11660 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS11660 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS11665 IPR012340 Nucleic acid-binding, OB-fold BER92_RS11665 IPR032639 Tex protein, YqgF-like domain BER92_RS11665 IPR022967 RNA-binding domain, S1 BER92_RS11665 IPR003029 S1 domain BER92_RS11665 IPR023323 Tex-like domain superfamily BER92_RS11665 IPR023319 Tex-like protein, HTH domain superfamily BER92_RS11665 IPR018974 Tex-like protein, N-terminal BER92_RS11665 IPR041692 HHH domain 9 BER92_RS11665 IPR012337 Ribonuclease H-like superfamily BER92_RS11665 IPR037027 YqgF/RNase H-like domain superfamily BER92_RS11665 IPR010994 RuvA domain 2-like BER92_RS11665 IPR006641 YqgF/RNase H-like domain BER92_RS11690 IPR000073 Alpha/beta hydrolase fold-1 BER92_RS11690 IPR029058 Alpha/Beta hydrolase fold BER92_RS11690 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit BER92_RS11700 IPR000462 CDP-alcohol phosphatidyltransferase BER92_RS11700 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase BER92_RS11715 IPR026530 Phosphoenolpyruvate synthase regulatory protein BER92_RS11715 IPR005177 Bifunctional kinase-pyrophosphorylase BER92_RS11720 IPR000121 PEP-utilising enzyme, C-terminal BER92_RS11720 IPR023151 PEP-utilising enzyme, conserved site BER92_RS11720 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BER92_RS11720 IPR013815 ATP-grasp fold, subdomain 1 BER92_RS11720 IPR040442 Pyruvate kinase-like domain superfamily BER92_RS11720 IPR036637 Phosphohistidine domain superfamily BER92_RS11720 IPR018274 PEP-utilising enzyme, active site BER92_RS11720 IPR006319 Phosphoenolpyruvate synthase BER92_RS11720 IPR008279 PEP-utilising enzyme, mobile domain BER92_RS11720 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding BER92_RS11725 IPR008910 Conserved TM helix BER92_RS11725 IPR023408 Mechanosensitive ion channel MscS domain superfamily BER92_RS11725 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 BER92_RS11725 IPR011066 Mechanosensitive ion channel MscS, C-terminal BER92_RS11725 IPR006685 Mechanosensitive ion channel MscS BER92_RS11725 IPR010920 LSM domain superfamily BER92_RS11725 IPR006686 Mechanosensitive ion channel MscS, conserved site BER92_RS11730 IPR036397 Ribonuclease H superfamily BER92_RS11730 IPR012337 Ribonuclease H-like superfamily BER92_RS11730 IPR022894 Oligoribonuclease BER92_RS11730 IPR013520 Exonuclease, RNase T/DNA polymerase III BER92_RS11735 IPR016192 APOBEC/CMP deaminase, zinc-binding BER92_RS11735 IPR002125 Cytidine and deoxycytidylate deaminase domain BER92_RS11735 IPR016193 Cytidine deaminase-like BER92_RS11735 IPR028883 tRNA-specific adenosine deaminase BER92_RS11740 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS11740 IPR001367 Iron dependent repressor, metal binding and dimerisation domain BER92_RS11740 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily BER92_RS11740 IPR022687 DTXR-type HTH domain BER92_RS11740 IPR022689 Iron dependent repressor BER92_RS11740 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS11745 IPR001046 NRAMP family BER92_RS11750 IPR000073 Alpha/beta hydrolase fold-1 BER92_RS11750 IPR000639 Epoxide hydrolase-like BER92_RS11750 IPR029058 Alpha/Beta hydrolase fold BER92_RS11755 IPR008490 Transposase InsH, N-terminal BER92_RS11795 IPR002514 Transposase IS3/IS911family BER92_RS11795 IPR009057 Homeobox-like domain superfamily BER92_RS11800 IPR012337 Ribonuclease H-like superfamily BER92_RS11800 IPR025948 HTH-like domain BER92_RS11800 IPR036397 Ribonuclease H superfamily BER92_RS11800 IPR001584 Integrase, catalytic core BER92_RS11815 IPR036397 Ribonuclease H superfamily BER92_RS11815 IPR012337 Ribonuclease H-like superfamily BER92_RS11815 IPR001584 Integrase, catalytic core BER92_RS11815 IPR025948 HTH-like domain BER92_RS11820 IPR002514 Transposase IS3/IS911family BER92_RS11820 IPR009057 Homeobox-like domain superfamily BER92_RS11830 IPR008490 Transposase InsH, N-terminal BER92_RS11840 IPR000965 GPR domain BER92_RS11840 IPR012134 Glutamate-5-semialdehyde dehydrogenase BER92_RS11840 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site BER92_RS11840 IPR015590 Aldehyde dehydrogenase domain BER92_RS11840 IPR016162 Aldehyde dehydrogenase, N-terminal BER92_RS11840 IPR016163 Aldehyde dehydrogenase, C-terminal BER92_RS11840 IPR016161 Aldehyde/histidinol dehydrogenase BER92_RS11845 IPR041739 Glutamate-5-kinase domain BER92_RS11845 IPR011529 Glutamate 5-kinase BER92_RS11845 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase BER92_RS11845 IPR001057 Glutamate/acetylglutamate kinase BER92_RS11845 IPR036393 Acetylglutamate kinase-like superfamily BER92_RS11845 IPR001048 Aspartate/glutamate/uridylate kinase BER92_RS11845 IPR002478 PUA domain BER92_RS11845 IPR015947 PUA-like superfamily BER92_RS11845 IPR036974 PUA domain superfamily BER92_RS11845 IPR019797 Glutamate 5-kinase, conserved site BER92_RS11860 IPR008948 L-Aspartase-like BER92_RS11860 IPR022761 Fumarate lyase, N-terminal BER92_RS11860 IPR009049 Argininosuccinate lyase BER92_RS11860 IPR020557 Fumarate lyase, conserved site BER92_RS11860 IPR024083 Fumarase/histidase, N-terminal BER92_RS11860 IPR000362 Fumarate lyase family BER92_RS11865 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site BER92_RS11865 IPR000534 Semialdehyde dehydrogenase, NAD-binding BER92_RS11865 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 BER92_RS11865 IPR036291 NAD(P)-binding domain superfamily BER92_RS11875 IPR036393 Acetylglutamate kinase-like superfamily BER92_RS11875 IPR004662 Acetylglutamate kinase family BER92_RS11875 IPR011242 Acetylglutamate kinase ArgB, GNAT domain-containing BER92_RS11875 IPR001048 Aspartate/glutamate/uridylate kinase BER92_RS11875 IPR041734 N-Acetyl-L-glutamate kinase, fungal-type BER92_RS11875 IPR006855 Vertebrate-like NAGS Gcn5-related N-acetyltransferase (GNAT) domain BER92_RS11875 IPR016181 Acyl-CoA N-acyltransferase BER92_RS11880 IPR002933 Peptidase M20 BER92_RS11880 IPR036264 Bacterial exopeptidase dimerisation domain BER92_RS11880 IPR011650 Peptidase M20, dimerisation domain BER92_RS11880 IPR010169 Acetylornithine deacetylase ArgE BER92_RS11885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS11885 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body BER92_RS11885 IPR023434 Argininosuccinate synthase, type 1 subfamily BER92_RS11885 IPR018223 Argininosuccinate synthase, conserved site BER92_RS11885 IPR001518 Argininosuccinate synthase BER92_RS11890 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily BER92_RS11890 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain BER92_RS11890 IPR006130 Aspartate/ornithine carbamoyltransferase BER92_RS11890 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding BER92_RS11900 IPR032678 tRNA synthetases class I, catalytic domain BER92_RS11900 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS11900 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase BER92_RS11900 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BER92_RS11900 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR BER92_RS11900 IPR015803 Cysteine-tRNA ligase BER92_RS11905 IPR023939 Cysteine desulfuration protein SufE BER92_RS11905 IPR003808 Fe-S metabolism associated domain, SufE-like BER92_RS11915 IPR012784 RNA polymerase-binding transcription factor DksA BER92_RS11915 IPR037187 DksA, N-terminal domain superfamily BER92_RS11915 IPR000962 Zinc finger, DksA/TraR C4-type BER92_RS11915 IPR020458 Zinc finger, DksA/TraR C4-type conserved site BER92_RS11920 IPR006680 Amidohydrolase-related BER92_RS11920 IPR004722 Dihydroorotase BER92_RS11920 IPR002195 Dihydroorotase, conserved site BER92_RS11920 IPR011059 Metal-dependent hydrolase, composite domain superfamily BER92_RS11920 IPR032466 Metal-dependent hydrolase BER92_RS11925 IPR003646 SH3-like domain, bacterial-type BER92_RS11925 IPR016047 Peptidase M23 BER92_RS11925 IPR011055 Duplicated hybrid motif BER92_RS11930 IPR008490 Transposase InsH, N-terminal BER92_RS11930 IPR002559 Transposase, IS4-like BER92_RS11960 IPR011050 Pectin lyase fold/virulence factor BER92_RS11960 IPR012334 Pectin lyase fold BER92_RS11960 IPR000743 Glycoside hydrolase, family 28 BER92_RS11970 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic BER92_RS11970 IPR036412 HAD-like superfamily BER92_RS11970 IPR006439 HAD hydrolase, subfamily IA BER92_RS11970 IPR041492 Haloacid dehalogenase-like hydrolase BER92_RS11970 IPR023214 HAD superfamily BER92_RS11970 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BER92_RS11970 IPR037512 Phosphoglycolate phosphatase, prokaryotic BER92_RS11975 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS11975 IPR010233 Ubiquinone biosynthesis O-methyltransferase BER92_RS11980 IPR023512 Deaminase MtaD/DadD BER92_RS11980 IPR006680 Amidohydrolase-related BER92_RS11980 IPR011059 Metal-dependent hydrolase, composite domain superfamily BER92_RS11980 IPR032466 Metal-dependent hydrolase BER92_RS11990 IPR013185 Translation elongation factor, KOW-like BER92_RS11990 IPR001059 Translation elongation factor P/YeiP, central BER92_RS11990 IPR020599 Translation elongation factor P/YeiP BER92_RS11990 IPR008991 Translation protein SH3-like domain superfamily BER92_RS11990 IPR012340 Nucleic acid-binding, OB-fold BER92_RS11990 IPR013852 Translation elongation factor P/YeiP, conserved site BER92_RS11990 IPR015365 Elongation factor P, C-terminal BER92_RS11990 IPR014722 Ribosomal protein L2, domain 2 BER92_RS11990 IPR011768 Translation elongation factor P BER92_RS11995 IPR013785 Aldolase-type TIM barrel BER92_RS11995 IPR022462 Lysine-2,3-aminomutase-like BER92_RS11995 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase BER92_RS11995 IPR007197 Radical SAM BER92_RS12000 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BER92_RS12000 IPR001537 tRNA/rRNA methyltransferase, SpoU type BER92_RS12000 IPR004384 RNA methyltransferase TrmJ/LasT BER92_RS12000 IPR029028 Alpha/beta knot methyltransferases BER92_RS12005 IPR022337 Inositol monophosphatase, SuhB BER92_RS12005 IPR020550 Inositol monophosphatase, conserved site BER92_RS12005 IPR000760 Inositol monophosphatase-like BER92_RS12005 IPR020583 Inositol monophosphatase, metal-binding site BER92_RS12005 IPR033942 Inositol monophosphatase BER92_RS12010 IPR019831 Manganese/iron superoxide dismutase, N-terminal BER92_RS12010 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily BER92_RS12010 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily BER92_RS12010 IPR019832 Manganese/iron superoxide dismutase, C-terminal BER92_RS12010 IPR019833 Manganese/iron superoxide dismutase, binding site BER92_RS12010 IPR001189 Manganese/iron superoxide dismutase BER92_RS12015 IPR016191 Ribonuclease/ribotoxin BER92_RS12015 IPR000026 Guanine-specific ribonuclease N1/T1/U2 BER92_RS12025 IPR003593 AAA+ ATPase domain BER92_RS12025 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily BER92_RS12025 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS12025 IPR017871 ABC transporter, conserved site BER92_RS12025 IPR003439 ABC transporter-like BER92_RS12025 IPR032781 ABC-transporter extension domain BER92_RS12025 IPR032524 ABC transporter Uup, C-terminal BER92_RS12030 IPR014014 RNA helicase, DEAD-box type, Q motif BER92_RS12030 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BER92_RS12030 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain BER92_RS12030 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BER92_RS12030 IPR001650 Helicase, C-terminal BER92_RS12030 IPR014001 Helicase superfamily 1/2, ATP-binding domain BER92_RS12030 IPR028619 ATP-dependent RNA helicase DbpA BER92_RS12030 IPR011545 DEAD/DEAH box helicase domain BER92_RS12030 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS12035 IPR029057 Phosphoribosyltransferase-like BER92_RS12035 IPR005764 Adenine phosphoribosyl transferase BER92_RS12035 IPR000836 Phosphoribosyltransferase domain BER92_RS12040 IPR003846 Protein adenylyltransferase SelO BER92_RS12050 IPR010987 Glutathione S-transferase, C-terminal-like BER92_RS12050 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BER92_RS12050 IPR040079 Glutathione Transferase family BER92_RS12050 IPR004045 Glutathione S-transferase, N-terminal BER92_RS12050 IPR004046 Glutathione S-transferase, C-terminal BER92_RS12050 IPR005955 Glutathione S-transferases, class Zeta BER92_RS12050 IPR034330 Glutathione S-transferases, class Zeta , C-terminal BER92_RS12050 IPR034333 Glutathione S-transferases, class Zeta , N-terminal BER92_RS12050 IPR036249 Thioredoxin-like superfamily BER92_RS12055 IPR011129 Cold shock domain BER92_RS12055 IPR012156 Cold shock, CspA BER92_RS12055 IPR012340 Nucleic acid-binding, OB-fold BER92_RS12055 IPR002059 Cold-shock protein, DNA-binding BER92_RS12055 IPR019844 Cold-shock (CSD) domain BER92_RS12065 IPR011335 Restriction endonuclease type II-like BER92_RS12065 IPR009822 YaeQ BER92_RS12065 IPR038590 YaeQ superfamily BER92_RS12070 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS12070 IPR023166 HI0933-like insert domain superfamily BER92_RS12070 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like BER92_RS12075 IPR000160 GGDEF domain BER92_RS12075 IPR011006 CheY-like superfamily BER92_RS12075 IPR001633 EAL domain BER92_RS12075 IPR035919 EAL domain superfamily BER92_RS12075 IPR029787 Nucleotide cyclase BER92_RS12075 IPR001789 Signal transduction response regulator, receiver domain BER92_RS12080 IPR022919 Peptidase M48, protease HtpX, putative BER92_RS12080 IPR001915 Peptidase M48 BER92_RS12085 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain BER92_RS12085 IPR022380 Glutamyl-Q tRNA(Asp) synthetase BER92_RS12085 IPR000924 Glutamyl/glutaminyl-tRNA synthetase BER92_RS12085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS12090 IPR020904 Short-chain dehydrogenase/reductase, conserved site BER92_RS12090 IPR036291 NAD(P)-binding domain superfamily BER92_RS12090 IPR011283 Acetoacetyl-CoA reductase BER92_RS12090 IPR002347 Short-chain dehydrogenase/reductase SDR BER92_RS12095 IPR012909 PHA accumulation regulator DNA-binding, N-terminal BER92_RS12095 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR BER92_RS12095 IPR007897 PHB accumulation regulatory BER92_RS12110 IPR042121 MutL, C-terminal domain, regulatory subdomain BER92_RS12110 IPR037198 MutL, C-terminal domain superfamily BER92_RS12110 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms BER92_RS12110 IPR020568 Ribosomal protein S5 domain 2-type fold BER92_RS12110 IPR042120 MutL, C-terminal domain, dimerisation subdomain BER92_RS12110 IPR013507 DNA mismatch repair protein, S5 domain 2-like BER92_RS12110 IPR014790 MutL, C-terminal, dimerisation BER92_RS12110 IPR002099 DNA mismatch repair protein family, N-terminal BER92_RS12110 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BER92_RS12110 IPR020667 DNA mismatch repair protein, MutL BER92_RS12110 IPR014762 DNA mismatch repair, conserved site BER92_RS12110 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS12115 IPR006311 Twin-arginine translocation pathway, signal sequence BER92_RS12115 IPR021731 AMIN domain BER92_RS12115 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain BER92_RS12125 IPR036652 YjeF N-terminal domain superfamily BER92_RS12125 IPR017953 Carbohydrate kinase, predicted, conserved site BER92_RS12125 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase BER92_RS12125 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr BER92_RS12125 IPR029056 Ribokinase-like BER92_RS12125 IPR004443 YjeF N-terminal domain BER92_RS12130 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BER92_RS12130 IPR004453 Epoxyqueuosine reductase QueG BER92_RS12130 IPR013542 Domain of unknown function DUF1730 BER92_RS12130 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BER92_RS12135 IPR025824 OB-fold nucleic acid binding domain BER92_RS12135 IPR020579 Exonuclease VII, large subunit, C-terminal BER92_RS12135 IPR003753 Exonuclease VII, large subunit BER92_RS12155 IPR003744 Queuosine precursor transporter BER92_RS12175 IPR003726 Homocysteine-binding domain BER92_RS12175 IPR036589 Homocysteine-binding domain superfamily BER92_RS12175 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT BER92_RS12180 IPR004840 Amino acid permease, conserved site BER92_RS12180 IPR004841 Amino acid permease/ SLC12A domain BER92_RS12190 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BER92_RS12190 IPR015413 Methionyl/Leucyl tRNA synthetase BER92_RS12190 IPR033911 Methioninyl-tRNA synthetase core domain BER92_RS12190 IPR029038 Methionyl-tRNA synthetase, Zn-domain BER92_RS12190 IPR012340 Nucleic acid-binding, OB-fold BER92_RS12190 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS12190 IPR002547 tRNA-binding domain BER92_RS12190 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BER92_RS12190 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal BER92_RS12190 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain BER92_RS12190 IPR014758 Methionyl-tRNA synthetase BER92_RS12190 IPR023458 Methionine-tRNA ligase, type 1 BER92_RS12200 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria BER92_RS12200 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB BER92_RS12200 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BER92_RS12200 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BER92_RS12200 IPR007202 4Fe-4S domain BER92_RS12215 IPR013325 RNA polymerase sigma factor, region 2 BER92_RS12215 IPR013324 RNA polymerase sigma factor, region 3/4-like BER92_RS12215 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS12215 IPR007627 RNA polymerase sigma-70 region 2 BER92_RS12215 IPR014284 RNA polymerase sigma-70 like domain BER92_RS12215 IPR039425 RNA polymerase sigma-70 like BER92_RS12215 IPR007630 RNA polymerase sigma-70 region 4 BER92_RS12240 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS12240 IPR003333 Mycolic acid cyclopropane synthase BER92_RS12255 IPR003333 Mycolic acid cyclopropane synthase BER92_RS12255 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS12260 IPR019897 RidA, conserved site BER92_RS12260 IPR035959 RutC-like superfamily BER92_RS12260 IPR006175 YjgF/YER057c/UK114 family BER92_RS12260 IPR035709 RutC family, YoaB-like BER92_RS12270 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal BER92_RS12270 IPR016181 Acyl-CoA N-acyltransferase BER92_RS12270 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD BER92_RS12290 IPR008490 Transposase InsH, N-terminal BER92_RS12305 IPR020846 Major facilitator superfamily domain BER92_RS12305 IPR011701 Major facilitator superfamily BER92_RS12305 IPR036259 MFS transporter superfamily BER92_RS12310 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal BER92_RS12310 IPR013785 Aldolase-type TIM barrel BER92_RS12315 IPR013988 PhnA protein, C-terminal BER92_RS12315 IPR004624 PhnA protein BER92_RS12315 IPR013987 PhnA protein, N-terminal BER92_RS12335 IPR004753 Cell shape determining protein MreB BER92_RS12350 IPR023459 Transcription elongation factor GreA/GreB family BER92_RS12350 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily BER92_RS12350 IPR018151 Transcription elongation factor, GreA/GreB, conserved site BER92_RS12350 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal BER92_RS12350 IPR006358 Transcription elongation factor GreB BER92_RS12350 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal BER92_RS12350 IPR028624 Transcription elongation factor GreA/GreB BER92_RS12350 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily BER92_RS12365 IPR006638 Elp3/MiaB/NifB BER92_RS12365 IPR002792 TRAM domain BER92_RS12365 IPR023404 Radical SAM, alpha/beta horseshoe BER92_RS12365 IPR007197 Radical SAM BER92_RS12365 IPR041582 RimO, TRAM domain BER92_RS12365 IPR005840 Ribosomal protein S12 methylthiotransferase RimO BER92_RS12365 IPR038135 Methylthiotransferase, N-terminal domain superfamily BER92_RS12365 IPR013848 Methylthiotransferase, N-terminal BER92_RS12365 IPR020612 Methylthiotransferase, conserved site BER92_RS12365 IPR005839 Methylthiotransferase BER92_RS12380 IPR029058 Alpha/Beta hydrolase fold BER92_RS12380 IPR002925 Dienelactone hydrolase BER92_RS12390 IPR029054 dUTPase-like BER92_RS12390 IPR033704 dUTPase, trimeric BER92_RS12390 IPR036157 dUTPase-like superfamily BER92_RS12390 IPR011962 dCTP deaminase BER92_RS12395 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 BER92_RS12395 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS12395 IPR000808 Mrp, conserved site BER92_RS12395 IPR019591 Mrp/NBP35 ATP-binding protein BER92_RS12405 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS12410 IPR024079 Metallopeptidase, catalytic domain superfamily BER92_RS12410 IPR000718 Peptidase M13 BER92_RS12410 IPR018497 Peptidase M13, C-terminal domain BER92_RS12410 IPR042089 Peptidase M13, domain 2 BER92_RS12410 IPR008753 Peptidase M13, N-terminal domain BER92_RS12430 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BER92_RS12430 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site BER92_RS12430 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS12430 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I BER92_RS12430 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily BER92_RS12430 IPR023753 FAD/NAD(P)-binding domain BER92_RS12430 IPR006322 Glutathione reductase, eukaryote/bacterial BER92_RS12435 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS12435 IPR006076 FAD dependent oxidoreductase BER92_RS12435 IPR023080 D-amino acid dehydrogenase DadA BER92_RS12440 IPR007349 Domain of unknown function DUF418 BER92_RS12445 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BER92_RS12450 IPR000064 Endopeptidase, NLPC/P60 domain BER92_RS12450 IPR038765 Papain-like cysteine peptidase superfamily BER92_RS12455 IPR038765 Papain-like cysteine peptidase superfamily BER92_RS12455 IPR000064 Endopeptidase, NLPC/P60 domain BER92_RS12465 IPR009057 Homeobox-like domain superfamily BER92_RS12465 IPR002514 Transposase IS3/IS911family BER92_RS12470 IPR012337 Ribonuclease H-like superfamily BER92_RS12470 IPR025948 HTH-like domain BER92_RS12470 IPR036397 Ribonuclease H superfamily BER92_RS12470 IPR001584 Integrase, catalytic core BER92_RS12475 IPR008490 Transposase InsH, N-terminal BER92_RS12480 IPR002559 Transposase, IS4-like BER92_RS12480 IPR008490 Transposase InsH, N-terminal BER92_RS12505 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS12505 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS12505 IPR005119 LysR, substrate-binding BER92_RS12505 IPR000847 Transcription regulator HTH, LysR BER92_RS12510 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily BER92_RS12510 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm BER92_RS12510 IPR015866 Serine-tRNA synthetase, type1, N-terminal BER92_RS12510 IPR002317 Serine-tRNA ligase, type1 BER92_RS12510 IPR006195 Aminoacyl-tRNA synthetase, class II BER92_RS12510 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) BER92_RS12510 IPR033729 Serine-tRNA ligase catalytic core domain BER92_RS12515 IPR037682 TonB, C-terminal BER92_RS12515 IPR006260 TonB/TolA, C-terminal BER92_RS12525 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site BER92_RS12525 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta BER92_RS12525 IPR036968 Enolpyruvate transferase domain superfamily BER92_RS12525 IPR001986 Enolpyruvate transferase domain BER92_RS12525 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase BER92_RS12530 IPR002701 Chorismate mutase II, prokaryotic-type BER92_RS12530 IPR036979 Chorismate mutase domain superfamily BER92_RS12530 IPR036263 Chorismate mutase type II superfamily BER92_RS12530 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase BER92_RS12530 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain BER92_RS12530 IPR002912 ACT domain BER92_RS12530 IPR001086 Prephenate dehydratase BER92_RS12530 IPR018528 Prephenate dehydratase, conserved site BER92_RS12535 IPR000192 Aminotransferase class V domain BER92_RS12535 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BER92_RS12535 IPR022278 Phosphoserine aminotransferase BER92_RS12535 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS12535 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BER92_RS12535 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS12540 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP BER92_RS12540 IPR000572 Oxidoreductase, molybdopterin-binding domain BER92_RS12540 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily BER92_RS12545 IPR000843 LacI-type HTH domain BER92_RS12545 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BER92_RS12545 IPR028082 Periplasmic binding protein-like I BER92_RS12550 IPR036618 PtsI, HPr-binding domain superfamily BER92_RS12550 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BER92_RS12550 IPR000121 PEP-utilising enzyme, C-terminal BER92_RS12550 IPR023151 PEP-utilising enzyme, conserved site BER92_RS12550 IPR036637 Phosphohistidine domain superfamily BER92_RS12550 IPR016152 Phosphotransferase/anion transporter BER92_RS12550 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BER92_RS12550 IPR040442 Pyruvate kinase-like domain superfamily BER92_RS12550 IPR008279 PEP-utilising enzyme, mobile domain BER92_RS12550 IPR035895 HPr-like superfamily BER92_RS12550 IPR000032 Phosphocarrier protein HPr-like BER92_RS12550 IPR008731 Phosphotransferase system, enzyme I N-terminal BER92_RS12550 IPR002178 PTS EIIA type-2 domain BER92_RS12550 IPR006318 Phosphotransferase system, enzyme I-like BER92_RS12550 IPR018274 PEP-utilising enzyme, active site BER92_RS12550 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BER92_RS12555 IPR017583 Tagatose/fructose phosphokinase BER92_RS12555 IPR029056 Ribokinase-like BER92_RS12555 IPR022463 Fructose 1-phosphate kinase BER92_RS12555 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site BER92_RS12555 IPR011611 Carbohydrate kinase PfkB BER92_RS12560 IPR036095 PTS system IIB component-like superfamily BER92_RS12560 IPR006327 Phosphotransferase system, fructose IIC component BER92_RS12560 IPR013011 Phosphotransferase system, EIIB component, type 2 BER92_RS12560 IPR003501 Phosphotransferase system, EIIB component, type 2/3 BER92_RS12560 IPR013014 Phosphotransferase system, EIIC component, type 2 BER92_RS12560 IPR003353 Phosphotransferase system, fructose-specific IIB subunit BER92_RS12570 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BER92_RS12570 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BER92_RS12570 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BER92_RS12570 IPR005665 Protein-export membrane protein SecF, bacterial BER92_RS12575 IPR001036 Acriflavin resistance protein BER92_RS12575 IPR027398 SecD export protein N-terminal TM domain BER92_RS12575 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BER92_RS12575 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BER92_RS12575 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BER92_RS12575 IPR005791 Protein translocase subunit SecD BER92_RS12580 IPR003849 Preprotein translocase YajC BER92_RS12585 IPR004803 tRNA-guanine transglycosylase BER92_RS12585 IPR036511 Queuine tRNA-ribosyltransferase-like BER92_RS12585 IPR002616 tRNA-guanine(15) transglycosylase-like BER92_RS12590 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA BER92_RS12590 IPR042118 QueA, domain 1 BER92_RS12590 IPR042119 QueA, domain 2 BER92_RS12590 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily BER92_RS12600 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase BER92_RS12600 IPR005814 Aminotransferase class-III BER92_RS12600 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BER92_RS12600 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS12600 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS12615 IPR000836 Phosphoribosyltransferase domain BER92_RS12615 IPR029057 Phosphoribosyltransferase-like BER92_RS12615 IPR005765 Uracil phosphoribosyl transferase BER92_RS12615 IPR034332 Uracil phosphoribosyltransferase, bacterial-type BER92_RS12620 IPR025161 Putative transposase IS4/IS5 family BER92_RS12625 IPR002559 Transposase, IS4-like BER92_RS12630 IPR012341 Six-hairpin glycosidase-like superfamily BER92_RS12630 IPR004197 Cellulase, Ig-like domain BER92_RS12630 IPR008928 Six-hairpin glycosidase superfamily BER92_RS12630 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites BER92_RS12630 IPR014756 Immunoglobulin E-set BER92_RS12630 IPR001701 Glycoside hydrolase family 9 BER92_RS12630 IPR013783 Immunoglobulin-like fold BER92_RS12630 IPR018221 Glycoside hydrolase family 9, His active site BER92_RS12635 IPR029055 Nucleophile aminohydrolases, N-terminal BER92_RS12635 IPR000101 Gamma-glutamyltranspeptidase BER92_RS12640 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BER92_RS12640 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BER92_RS12650 IPR004821 Cytidyltransferase-like domain BER92_RS12650 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS12650 IPR001980 Phosphopantetheine adenylyltransferase BER92_RS12655 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BER92_RS12655 IPR004398 RNA methyltransferase, RsmD BER92_RS12655 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS12660 IPR020575 Heat shock protein Hsp90, N-terminal BER92_RS12660 IPR001404 Heat shock protein Hsp90 family BER92_RS12660 IPR020568 Ribosomal protein S5 domain 2-type fold BER92_RS12660 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS12660 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS12660 IPR037196 HSP90, C-terminal domain BER92_RS12660 IPR019805 Heat shock protein Hsp90, conserved site BER92_RS12685 IPR002559 Transposase, IS4-like BER92_RS12685 IPR008490 Transposase InsH, N-terminal BER92_RS12700 IPR001991 Sodium:dicarboxylate symporter BER92_RS12700 IPR036458 Sodium:dicarboxylate symporter superfamily BER92_RS12700 IPR033380 Glutamate-aspartate symport protein GltP/GltT BER92_RS12700 IPR018107 Sodium:dicarboxylate symporter, conserved site BER92_RS12705 IPR018299 Alkaline phosphatase, active site BER92_RS12705 IPR017850 Alkaline-phosphatase-like, core domain superfamily BER92_RS12705 IPR001952 Alkaline phosphatase BER92_RS12710 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain BER92_RS12710 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal BER92_RS12710 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS12710 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal BER92_RS12710 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal BER92_RS12710 IPR012094 tRNA(Ile)-lysidine synthase BER92_RS12715 IPR037004 Exonuclease VII, small subunit superfamily BER92_RS12715 IPR003761 Exonuclease VII, small subunit BER92_RS12720 IPR033749 Polyprenyl synthetase, conserved site BER92_RS12720 IPR008949 Isoprenoid synthase domain superfamily BER92_RS12720 IPR000092 Polyprenyl synthetase BER92_RS12735 IPR035068 Metalloprotease TldD/PmbA, N-terminal BER92_RS12735 IPR002510 Metalloprotease TldD/PmbA BER92_RS12735 IPR036059 Metalloprotease TldD/PmbA superfamily BER92_RS12740 IPR006839 Ribosome-associated, YjgA BER92_RS12740 IPR023153 PSPTO4464-like domain superfamily BER92_RS12745 IPR025502 TldD BER92_RS12745 IPR002510 Metalloprotease TldD/PmbA BER92_RS12745 IPR035068 Metalloprotease TldD/PmbA, N-terminal BER92_RS12745 IPR036059 Metalloprotease TldD/PmbA superfamily BER92_RS12760 IPR022967 RNA-binding domain, S1 BER92_RS12760 IPR004659 Ribonuclease E/G BER92_RS12760 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G BER92_RS12760 IPR003029 S1 domain BER92_RS12760 IPR012340 Nucleic acid-binding, OB-fold BER92_RS12765 IPR029001 Inosine triphosphate pyrophosphatase-like BER92_RS12765 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein BER92_RS12770 IPR007497 Protein of unknown function DUF541 BER92_RS12775 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BER92_RS12775 IPR029028 Alpha/beta knot methyltransferases BER92_RS12775 IPR003742 RNA methyltransferase RlmH BER92_RS12780 IPR002514 Transposase IS3/IS911family BER92_RS12780 IPR009057 Homeobox-like domain superfamily BER92_RS12800 IPR004394 Protein Iojap/ribosomal silencing factor RsfS BER92_RS12805 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS12805 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase BER92_RS12805 IPR004821 Cytidyltransferase-like domain BER92_RS12820 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BER92_RS12820 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS12820 IPR025709 Leucyl-tRNA synthetase, editing domain BER92_RS12820 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BER92_RS12820 IPR002300 Aminoacyl-tRNA synthetase, class Ia BER92_RS12820 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BER92_RS12820 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BER92_RS12820 IPR002302 Leucine-tRNA ligase BER92_RS12830 IPR011990 Tetratricopeptide-like helical domain superfamily BER92_RS12830 IPR013766 Thioredoxin domain BER92_RS12830 IPR036249 Thioredoxin-like superfamily BER92_RS12855 IPR008258 Transglycosylase SLT domain 1 BER92_RS12855 IPR023346 Lysozyme-like domain superfamily BER92_RS12865 IPR005644 NolW-like BER92_RS12865 IPR004846 Type II/III secretion system BER92_RS12865 IPR004845 Type II secretion system GspD, conserved site BER92_RS12865 IPR003522 Type III secretion system outer membrane pore YscC/HrcC BER92_RS12865 IPR038591 NolW-like superfamily BER92_RS12880 IPR013380 ATPase, type III secretion system, H+-transporting BER92_RS12880 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BER92_RS12880 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS12880 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BER92_RS12880 IPR040627 T3SS EscN ATPase, C-terminal BER92_RS12880 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain BER92_RS12880 IPR003593 AAA+ ATPase domain BER92_RS12880 IPR005714 ATPase, type III secretion system, FliI/YscN BER92_RS12895 IPR006182 Secretory protein YscJ/FliF BER92_RS12895 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ BER92_RS12910 IPR006307 Type III exporter system, secretion apparatus protein BsaZ BER92_RS12910 IPR006135 Type III secretion system substrate exporter BER92_RS12910 IPR029025 Type III secretion system substrate exporter, C-terminal BER92_RS12915 IPR042193 FHIPEP, domain 3 BER92_RS12915 IPR042194 FHIPEP, domain 1 BER92_RS12915 IPR025505 FHIPEP conserved site BER92_RS12915 IPR042196 FHIPEP, domain 4 BER92_RS12915 IPR001712 Type III secretion system FHIPEP BER92_RS12930 IPR005773 Yop virulence translocation protein R BER92_RS12930 IPR005838 Type III secretion system inner membrane P protein BER92_RS12935 IPR002191 Bacterial export protein family 3 BER92_RS12935 IPR006305 Flagellar biosynthesis protein FliQ BER92_RS12965 IPR011050 Pectin lyase fold/virulence factor BER92_RS12965 IPR012334 Pectin lyase fold BER92_RS12965 IPR004898 Pectate lyase PlyH/PlyE-like BER92_RS12990 IPR007211 Protein of unknown function DUF378 BER92_RS13015 IPR002559 Transposase, IS4-like BER92_RS13025 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS13025 IPR017871 ABC transporter, conserved site BER92_RS13025 IPR039421 Type I protein exporter BER92_RS13025 IPR003439 ABC transporter-like BER92_RS13025 IPR036640 ABC transporter type 1, transmembrane domain superfamily BER92_RS13025 IPR011527 ABC transporter type 1, transmembrane domain BER92_RS13025 IPR003593 AAA+ ATPase domain BER92_RS13035 IPR038770 Sodium/solute symporter superfamily BER92_RS13035 IPR006153 Cation/H+ exchanger BER92_RS13055 IPR029787 Nucleotide cyclase BER92_RS13055 IPR000160 GGDEF domain BER92_RS13060 IPR002942 RNA-binding S4 domain BER92_RS13060 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BER92_RS13060 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BER92_RS13060 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain BER92_RS13060 IPR006145 Pseudouridine synthase, RsuA/RluA BER92_RS13060 IPR020103 Pseudouridine synthase, catalytic domain superfamily BER92_RS13060 IPR036986 RNA-binding S4 domain superfamily BER92_RS13070 IPR035919 EAL domain superfamily BER92_RS13070 IPR000160 GGDEF domain BER92_RS13070 IPR001633 EAL domain BER92_RS13070 IPR035965 PAS domain superfamily BER92_RS13070 IPR013656 PAS fold-4 BER92_RS13070 IPR029787 Nucleotide cyclase BER92_RS13070 IPR000014 PAS domain BER92_RS13075 IPR014001 Helicase superfamily 1/2, ATP-binding domain BER92_RS13075 IPR011545 DEAD/DEAH box helicase domain BER92_RS13075 IPR028618 ATP-dependent RNA helicase DeaD BER92_RS13075 IPR014014 RNA helicase, DEAD-box type, Q motif BER92_RS13075 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BER92_RS13075 IPR034415 CsdA, RNA recognition motif BER92_RS13075 IPR001650 Helicase, C-terminal BER92_RS13075 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BER92_RS13075 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS13075 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain BER92_RS13120 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding BER92_RS13120 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS13120 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain BER92_RS13120 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain BER92_RS13120 IPR023546 Methylated-DNA--protein-cysteine methyltransferase BER92_RS13120 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site BER92_RS13120 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily BER92_RS13135 IPR037066 TonB-dependent receptor, plug domain superfamily BER92_RS13135 IPR039426 Vitamin B12 transporter BtuB-like BER92_RS13135 IPR000531 TonB-dependent receptor-like, beta-barrel BER92_RS13135 IPR012910 TonB-dependent receptor, plug domain BER92_RS13145 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BER92_RS13145 IPR041924 Formate dehydrogenase H, N-terminal BER92_RS13145 IPR009010 Aspartate decarboxylase-like domain superfamily BER92_RS13145 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BER92_RS13145 IPR006657 Molybdopterin dinucleotide-binding domain BER92_RS13145 IPR006656 Molybdopterin oxidoreductase BER92_RS13145 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BER92_RS13145 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding BER92_RS13145 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain BER92_RS13145 IPR006478 Formate dehydrogenase, alpha subunit BER92_RS13145 IPR036010 2Fe-2S ferredoxin-like superfamily BER92_RS13155 IPR000209 Peptidase S8/S53 domain BER92_RS13155 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily BER92_RS13155 IPR025965 FlgD Ig-like domain BER92_RS13155 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 BER92_RS13155 IPR034213 Vpr-like peptidase, catalytic domain BER92_RS13155 IPR036852 Peptidase S8/S53 domain superfamily BER92_RS13155 IPR003137 PA domain BER92_RS13155 IPR022398 Peptidase S8, subtilisin, His-active site BER92_RS13155 IPR015500 Peptidase S8, subtilisin-related BER92_RS13155 IPR023827 Peptidase S8, subtilisin, Asp-active site BER92_RS13155 IPR023828 Peptidase S8, subtilisin, Ser-active site BER92_RS13180 IPR018087 Glycoside hydrolase, family 5, conserved site BER92_RS13180 IPR001547 Glycoside hydrolase, family 5 BER92_RS13180 IPR017853 Glycoside hydrolase superfamily BER92_RS13185 IPR008490 Transposase InsH, N-terminal BER92_RS13190 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS13190 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS13190 IPR002481 Ferric-uptake regulator BER92_RS13195 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BER92_RS13195 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain BER92_RS13195 IPR000924 Glutamyl/glutaminyl-tRNA synthetase BER92_RS13195 IPR033910 Glutamyl-tRNA synthetase BER92_RS13195 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS13195 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 BER92_RS13195 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial BER92_RS13195 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding BER92_RS13225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS13225 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BER92_RS13225 IPR007473 Ribosomal RNA large subunit methyltransferase J BER92_RS13235 IPR005118 Transcription-repair-coupling factor, C-terminal domain BER92_RS13235 IPR041471 UvrB, interaction domain BER92_RS13235 IPR036101 CarD-like/TRCF domain superfamily BER92_RS13235 IPR014001 Helicase superfamily 1/2, ATP-binding domain BER92_RS13235 IPR001650 Helicase, C-terminal BER92_RS13235 IPR003711 CarD-like/TRCF domain BER92_RS13235 IPR011545 DEAD/DEAH box helicase domain BER92_RS13235 IPR004576 Transcription-repair coupling factor BER92_RS13235 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS13235 IPR037235 TRCF-like, C-terminal domain BER92_RS13240 IPR005748 DNA mismatch repair protein MutS BER92_RS13240 IPR007695 DNA mismatch repair protein MutS-like, N-terminal BER92_RS13240 IPR017261 DNA mismatch repair protein MutS/MSH BER92_RS13240 IPR036187 DNA mismatch repair protein MutS, core domain superfamily BER92_RS13240 IPR016151 DNA mismatch repair protein MutS, N-terminal BER92_RS13240 IPR007860 DNA mismatch repair protein MutS, connector domain BER92_RS13240 IPR000432 DNA mismatch repair protein MutS, C-terminal BER92_RS13240 IPR007696 DNA mismatch repair protein MutS, core BER92_RS13240 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS13240 IPR007861 DNA mismatch repair protein MutS, clamp BER92_RS13240 IPR036678 MutS, connector domain superfamily BER92_RS13245 IPR019793 Peroxidases heam-ligand binding site BER92_RS13245 IPR010255 Haem peroxidase superfamily BER92_RS13245 IPR019794 Peroxidase, active site BER92_RS13245 IPR002016 Haem peroxidase BER92_RS13245 IPR000763 Catalase-peroxidase haem BER92_RS13255 IPR002559 Transposase, IS4-like BER92_RS13260 IPR009057 Homeobox-like domain superfamily BER92_RS13260 IPR002514 Transposase IS3/IS911family BER92_RS13280 IPR005952 Phosphoglycerate mutase 1 BER92_RS13280 IPR029033 Histidine phosphatase superfamily BER92_RS13280 IPR013078 Histidine phosphatase superfamily, clade-1 BER92_RS13280 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site BER92_RS13285 IPR007581 Endonuclease V BER92_RS13310 IPR025299 CstA, C-terminal domain BER92_RS13310 IPR003706 CstA, N-terminal domain BER92_RS13315 IPR007423 Selenoprotein, putative BER92_RS13320 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BER92_RS13320 IPR023214 HAD superfamily BER92_RS13320 IPR041492 Haloacid dehalogenase-like hydrolase BER92_RS13320 IPR006439 HAD hydrolase, subfamily IA BER92_RS13320 IPR036412 HAD-like superfamily BER92_RS13335 IPR029044 Nucleotide-diphospho-sugar transferases BER92_RS13335 IPR025877 MobA-like NTP transferase BER92_RS13345 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding BER92_RS13345 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily BER92_RS13345 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding BER92_RS13345 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily BER92_RS13345 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead BER92_RS13345 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily BER92_RS13345 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily BER92_RS13345 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead BER92_RS13350 IPR013515 Phytochrome, central region BER92_RS13350 IPR001294 Phytochrome BER92_RS13350 IPR016132 Phytochrome chromophore attachment domain BER92_RS13350 IPR029787 Nucleotide cyclase BER92_RS13350 IPR000160 GGDEF domain BER92_RS13350 IPR029016 GAF-like domain superfamily BER92_RS13350 IPR003018 GAF domain BER92_RS13350 IPR001633 EAL domain BER92_RS13350 IPR035919 EAL domain superfamily BER92_RS13355 IPR011344 Single-stranded DNA-binding protein BER92_RS13355 IPR000424 Primosome PriB/single-strand DNA-binding BER92_RS13355 IPR012340 Nucleic acid-binding, OB-fold BER92_RS13365 IPR000092 Polyprenyl synthetase BER92_RS13365 IPR033749 Polyprenyl synthetase, conserved site BER92_RS13365 IPR008949 Isoprenoid synthase domain superfamily BER92_RS13375 IPR036565 Mur-like, catalytic domain superfamily BER92_RS13375 IPR036615 Mur ligase, C-terminal domain superfamily BER92_RS13375 IPR013221 Mur ligase, central BER92_RS13375 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase BER92_RS13375 IPR018109 Folylpolyglutamate synthetase, conserved site BER92_RS13390 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain BER92_RS13390 IPR002912 ACT domain BER92_RS13390 IPR036393 Acetylglutamate kinase-like superfamily BER92_RS13390 IPR005260 Aspartate kinase, monofunctional class BER92_RS13390 IPR001341 Aspartate kinase BER92_RS13390 IPR018042 Aspartate kinase, conserved site BER92_RS13390 IPR001048 Aspartate/glutamate/uridylate kinase BER92_RS13400 IPR003719 Phenazine biosynthesis PhzF protein BER92_RS13410 IPR019904 Peroxiredoxin OsmC BER92_RS13410 IPR036102 OsmC/Ohr superfamily BER92_RS13410 IPR003718 OsmC/Ohr family BER92_RS13410 IPR015946 K homology domain-like, alpha/beta BER92_RS13415 IPR002082 Aspartate carbamoyltransferase BER92_RS13415 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain BER92_RS13415 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily BER92_RS13415 IPR006130 Aspartate/ornithine carbamoyltransferase BER92_RS13415 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding BER92_RS13420 IPR037027 YqgF/RNase H-like domain superfamily BER92_RS13420 IPR012337 Ribonuclease H-like superfamily BER92_RS13420 IPR006641 YqgF/RNase H-like domain BER92_RS13420 IPR005227 Putative pre-16S rRNA nuclease BER92_RS13425 IPR003774 Protein of unknown function UPF0301 BER92_RS13445 IPR001482 Type II/IV secretion system protein BER92_RS13445 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS13445 IPR006321 Pilus retraction protein PilT BER92_RS13450 IPR006321 Pilus retraction protein PilT BER92_RS13450 IPR003593 AAA+ ATPase domain BER92_RS13450 IPR001482 Type II/IV secretion system protein BER92_RS13450 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS13455 IPR029066 PLP-binding barrel BER92_RS13455 IPR011078 Pyridoxal phosphate homeostasis protein BER92_RS13455 IPR001608 Alanine racemase, N-terminal BER92_RS13460 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BER92_RS13460 IPR000304 Pyrroline-5-carboxylate reductase BER92_RS13460 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily BER92_RS13460 IPR036291 NAD(P)-binding domain superfamily BER92_RS13460 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain BER92_RS13490 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS13490 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS13490 IPR030489 Transcription regulator Rrf2-type, conserved site BER92_RS13490 IPR000944 Transcription regulator Rrf2-type BER92_RS13495 IPR000825 SUF system FeS cluster assembly, SufBD BER92_RS13495 IPR037284 SUF system FeS cluster assembly, SufBD superfamily BER92_RS13495 IPR010231 SUF system FeS cluster assembly, SufB BER92_RS13500 IPR017871 ABC transporter, conserved site BER92_RS13500 IPR003439 ABC transporter-like BER92_RS13500 IPR003593 AAA+ ATPase domain BER92_RS13500 IPR010230 FeS cluster assembly SUF system, ATPase SufC BER92_RS13500 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS13505 IPR011542 SUF system FeS cluster assembly, SufD BER92_RS13505 IPR000825 SUF system FeS cluster assembly, SufBD BER92_RS13505 IPR037284 SUF system FeS cluster assembly, SufBD superfamily BER92_RS13510 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS13510 IPR016454 Cysteine desulfurase BER92_RS13510 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BER92_RS13510 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS13510 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BER92_RS13510 IPR000192 Aminotransferase class V domain BER92_RS13510 IPR010970 Cysteine desulfurase, SufS BER92_RS13520 IPR017941 Rieske [2Fe-2S] iron-sulphur domain BER92_RS13520 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily BER92_RS13525 IPR030148 Catecholate siderophore receptor Fiu BER92_RS13525 IPR012910 TonB-dependent receptor, plug domain BER92_RS13525 IPR010105 TonB-dependent siderophore receptor BER92_RS13525 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BER92_RS13525 IPR000531 TonB-dependent receptor-like, beta-barrel BER92_RS13525 IPR037066 TonB-dependent receptor, plug domain superfamily BER92_RS13525 IPR039423 TonB-dependent receptor-like BER92_RS13530 IPR005123 Oxoglutarate/iron-dependent dioxygenase BER92_RS13530 IPR041097 PKHD-type hydroxylase C-terminal domain BER92_RS13530 IPR023550 PKHD-type hydroxylase BER92_RS13530 IPR006620 Prolyl 4-hydroxylase, alpha subunit BER92_RS13540 IPR009057 Homeobox-like domain superfamily BER92_RS13540 IPR002514 Transposase IS3/IS911family BER92_RS13560 IPR010994 RuvA domain 2-like BER92_RS13560 IPR004509 Competence protein ComEA, helix-hairpin-helix domain BER92_RS13565 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria BER92_RS13565 IPR036264 Bacterial exopeptidase dimerisation domain BER92_RS13565 IPR011650 Peptidase M20, dimerisation domain BER92_RS13565 IPR002933 Peptidase M20 BER92_RS13575 IPR002575 Aminoglycoside phosphotransferase BER92_RS13575 IPR011009 Protein kinase-like domain superfamily BER92_RS13580 IPR029044 Nucleotide-diphospho-sugar transferases BER92_RS13580 IPR005835 Nucleotidyl transferase domain BER92_RS13590 IPR020591 Chromosomal replication control, initiator DnaA-like BER92_RS13590 IPR013317 Chromosomal replication initiator protein DnaA BER92_RS13590 IPR017788 DnaA regulatory inactivator Hda BER92_RS13590 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae BER92_RS13590 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS13595 IPR002549 Transmembrane protein TqsA-like BER92_RS13605 IPR010918 PurM-like, C-terminal domain BER92_RS13605 IPR016188 PurM-like, N-terminal domain BER92_RS13605 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase BER92_RS13605 IPR036921 PurM-like, N-terminal domain superfamily BER92_RS13605 IPR036676 PurM-like, C-terminal domain superfamily BER92_RS13610 IPR004607 Phosphoribosylglycinamide formyltransferase BER92_RS13610 IPR036477 Formyl transferase, N-terminal domain superfamily BER92_RS13610 IPR002376 Formyl transferase, N-terminal BER92_RS13610 IPR001555 Phosphoribosylglycinamide formyltransferase, active site BER92_RS13635 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase BER92_RS13635 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta BER92_RS13635 IPR001986 Enolpyruvate transferase domain BER92_RS13635 IPR036968 Enolpyruvate transferase domain superfamily BER92_RS13640 IPR002634 BolA protein BER92_RS13640 IPR036065 BolA-like superfamily BER92_RS13645 IPR000644 CBS domain BER92_RS13645 IPR035474 KpsF-like, SIS domain BER92_RS13645 IPR001347 Sugar isomerase (SIS) BER92_RS13645 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type BER92_RS13650 IPR010023 KdsC family BER92_RS13650 IPR036412 HAD-like superfamily BER92_RS13650 IPR023214 HAD superfamily BER92_RS13660 IPR005653 Organic solvent tolerance-like, N-terminal BER92_RS13660 IPR014340 Lipopolysaccharide export system protein LptA BER92_RS13665 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS13665 IPR003593 AAA+ ATPase domain BER92_RS13665 IPR030921 LPS export ABC transporter, ATP-binding protein LptB BER92_RS13665 IPR017871 ABC transporter, conserved site BER92_RS13665 IPR003439 ABC transporter-like BER92_RS13670 IPR000394 RNA polymerase sigma factor 54 BER92_RS13670 IPR007046 RNA polymerase sigma factor 54, core-binding domain BER92_RS13670 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily BER92_RS13670 IPR007634 RNA polymerase sigma factor 54, DNA-binding BER92_RS13675 IPR036567 Ribosome hibernation promotion factor-like BER92_RS13675 IPR003489 Ribosome hibernation promoting factor/RaiA BER92_RS13680 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN BER92_RS13680 IPR002178 PTS EIIA type-2 domain BER92_RS13680 IPR016152 Phosphotransferase/anion transporter BER92_RS13685 IPR003755 HPr(Ser) kinase/phosphorylase BER92_RS13685 IPR011104 HPr kinase/phosphorylase, C-terminal BER92_RS13685 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal BER92_RS13685 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BER92_RS13690 IPR005337 RapZ-like family BER92_RS13690 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS13700 IPR000032 Phosphocarrier protein HPr-like BER92_RS13700 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BER92_RS13700 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BER92_RS13700 IPR035895 HPr-like superfamily BER92_RS13705 IPR008279 PEP-utilising enzyme, mobile domain BER92_RS13705 IPR036637 Phosphohistidine domain superfamily BER92_RS13705 IPR024692 Phosphotransferase system, enzyme I BER92_RS13705 IPR000121 PEP-utilising enzyme, C-terminal BER92_RS13705 IPR006318 Phosphotransferase system, enzyme I-like BER92_RS13705 IPR008731 Phosphotransferase system, enzyme I N-terminal BER92_RS13705 IPR018274 PEP-utilising enzyme, active site BER92_RS13705 IPR036618 PtsI, HPr-binding domain superfamily BER92_RS13705 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BER92_RS13705 IPR040442 Pyruvate kinase-like domain superfamily BER92_RS13705 IPR023151 PEP-utilising enzyme, conserved site BER92_RS13710 IPR006667 SLC41 divalent cation transporters, integral membrane domain BER92_RS13710 IPR006669 Magnesium transporter MgtE BER92_RS13710 IPR038048 Magnesium transporter MgtE, transmembrane domain BER92_RS13710 IPR038076 MgtE, N-terminal domain superfamily BER92_RS13710 IPR006668 Magnesium transporter, MgtE intracellular domain BER92_RS13710 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily BER92_RS13710 IPR000644 CBS domain BER92_RS13715 IPR002514 Transposase IS3/IS911family BER92_RS13715 IPR009057 Homeobox-like domain superfamily BER92_RS13745 IPR003836 Glucokinase BER92_RS13760 IPR041704 CFLE, GH18 catalytic domain BER92_RS13760 IPR011583 Chitinase II BER92_RS13760 IPR018392 LysM domain BER92_RS13760 IPR017853 Glycoside hydrolase superfamily BER92_RS13760 IPR029070 Chitinase insertion domain superfamily BER92_RS13760 IPR036779 LysM domain superfamily BER92_RS13760 IPR001223 Glycoside hydrolase family 18, catalytic domain BER92_RS13765 IPR011658 PA14 domain BER92_RS13765 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal BER92_RS13765 IPR017853 Glycoside hydrolase superfamily BER92_RS13765 IPR037524 PA14/GLEYA domain BER92_RS13765 IPR029018 Beta-hexosaminidase-like, domain 2 BER92_RS13765 IPR025705 Beta-hexosaminidase BER92_RS13765 IPR015883 Glycoside hydrolase family 20, catalytic domain BER92_RS13775 IPR011658 PA14 domain BER92_RS13775 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily BER92_RS13775 IPR001764 Glycoside hydrolase, family 3, N-terminal BER92_RS13775 IPR017853 Glycoside hydrolase superfamily BER92_RS13775 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily BER92_RS13775 IPR002772 Glycoside hydrolase family 3 C-terminal domain BER92_RS13775 IPR026891 Fibronectin type III-like domain BER92_RS13775 IPR013783 Immunoglobulin-like fold BER92_RS13775 IPR037524 PA14/GLEYA domain BER92_RS13780 IPR039421 Type I protein exporter BER92_RS13780 IPR017871 ABC transporter, conserved site BER92_RS13780 IPR005074 Peptidase C39, bacteriocin processing BER92_RS13780 IPR011527 ABC transporter type 1, transmembrane domain BER92_RS13780 IPR036640 ABC transporter type 1, transmembrane domain superfamily BER92_RS13780 IPR003593 AAA+ ATPase domain BER92_RS13780 IPR003439 ABC transporter-like BER92_RS13780 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS13780 IPR033838 Colicin V processing peptidase BER92_RS13785 IPR002514 Transposase IS3/IS911family BER92_RS13785 IPR009057 Homeobox-like domain superfamily BER92_RS13790 IPR012337 Ribonuclease H-like superfamily BER92_RS13790 IPR025948 HTH-like domain BER92_RS13790 IPR001584 Integrase, catalytic core BER92_RS13790 IPR036397 Ribonuclease H superfamily BER92_RS13800 IPR002559 Transposase, IS4-like BER92_RS13805 IPR002559 Transposase, IS4-like BER92_RS13805 IPR008490 Transposase InsH, N-terminal BER92_RS13815 IPR036397 Ribonuclease H superfamily BER92_RS13815 IPR025948 HTH-like domain BER92_RS13815 IPR012337 Ribonuclease H-like superfamily BER92_RS13815 IPR001584 Integrase, catalytic core BER92_RS13820 IPR002514 Transposase IS3/IS911family BER92_RS13820 IPR009057 Homeobox-like domain superfamily BER92_RS13835 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase BER92_RS13835 IPR034016 Aminopeptidase N-type BER92_RS13835 IPR014782 Peptidase M1, membrane alanine aminopeptidase BER92_RS13835 IPR042097 Aminopeptidase N-like , N-terminal BER92_RS13840 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS13840 IPR001114 Adenylosuccinate synthetase BER92_RS13840 IPR042111 Adenylosuccinate synthetase, domain 3 BER92_RS13840 IPR042109 Adenylosuccinate synthetase, domain 1 BER92_RS13840 IPR033128 Adenylosuccinate synthase, active site BER92_RS13840 IPR042110 Adenylosuccinate synthetase, domain 2 BER92_RS13840 IPR018220 Adenylosuccinate synthase, GTP-binding site BER92_RS13850 IPR001107 Band 7 domain BER92_RS13850 IPR010200 HflC BER92_RS13850 IPR036013 Band 7/SPFH domain superfamily BER92_RS13855 IPR020980 Menbrane protein HflK, N-terminal BER92_RS13855 IPR010201 HflK BER92_RS13855 IPR036013 Band 7/SPFH domain superfamily BER92_RS13855 IPR001107 Band 7 domain BER92_RS13855 IPR001972 Stomatin family BER92_RS13860 IPR001789 Signal transduction response regulator, receiver domain BER92_RS13860 IPR011006 CheY-like superfamily BER92_RS13865 IPR023859 DNA-binding protein, curved-DNA BER92_RS13865 IPR018253 DnaJ domain, conserved site BER92_RS13865 IPR001623 DnaJ domain BER92_RS13865 IPR036869 Chaperone J-domain superfamily BER92_RS13865 IPR008971 HSP40/DnaJ peptide-binding BER92_RS13865 IPR002939 Chaperone DnaJ, C-terminal BER92_RS13875 IPR037944 Peroxiredoxin-5-like BER92_RS13875 IPR013740 Redoxin BER92_RS13875 IPR036249 Thioredoxin-like superfamily BER92_RS13875 IPR013766 Thioredoxin domain BER92_RS13910 IPR002559 Transposase, IS4-like BER92_RS13920 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BER92_RS13920 IPR010105 TonB-dependent siderophore receptor BER92_RS13920 IPR000531 TonB-dependent receptor-like, beta-barrel BER92_RS13920 IPR012910 TonB-dependent receptor, plug domain BER92_RS13920 IPR039426 Vitamin B12 transporter BtuB-like BER92_RS13925 IPR007400 PrpF protein BER92_RS13925 IPR012709 2-methyl-aconitate isomerase PrpF BER92_RS13930 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent BER92_RS13930 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain BER92_RS13930 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel BER92_RS13930 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain BER92_RS13930 IPR006249 Aconitase/Iron-responsive element-binding protein 2 BER92_RS13930 IPR036008 Aconitase, iron-sulfur domain BER92_RS13930 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 BER92_RS13935 IPR016143 Citrate synthase-like, small alpha subdomain BER92_RS13935 IPR019810 Citrate synthase active site BER92_RS13935 IPR036969 Citrate synthase superfamily BER92_RS13935 IPR016142 Citrate synthase-like, large alpha subdomain BER92_RS13935 IPR002020 Citrate synthase BER92_RS13935 IPR011278 2-methylcitrate synthase/citrate synthase type I BER92_RS13935 IPR024176 Citrate synthase, bacterial-type BER92_RS13940 IPR012695 2-methylisocitrate lyase BER92_RS13940 IPR040442 Pyruvate kinase-like domain superfamily BER92_RS13940 IPR039556 ICL/PEPM domain BER92_RS13940 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BER92_RS13940 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site BER92_RS13945 IPR002197 DNA binding HTH domain, Fis-type BER92_RS13945 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS13945 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal BER92_RS13945 IPR002078 RNA polymerase sigma factor 54 interaction domain BER92_RS13945 IPR009057 Homeobox-like domain superfamily BER92_RS13945 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR BER92_RS13945 IPR025944 Sigma-54 interaction domain, conserved site BER92_RS13945 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BER92_RS13945 IPR003593 AAA+ ATPase domain BER92_RS13960 IPR002559 Transposase, IS4-like BER92_RS13960 IPR008490 Transposase InsH, N-terminal BER92_RS13980 IPR004622 DNA polymerase III, delta prime subunit BER92_RS13980 IPR015199 DNA polymerase III, delta subunit, C-terminal BER92_RS13980 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS13985 IPR003770 Endolytic murein transglycosylase BER92_RS13990 IPR005801 ADC synthase BER92_RS13990 IPR006805 Anthranilate synthase component I, N-terminal BER92_RS13990 IPR015890 Chorismate-utilising enzyme, C-terminal BER92_RS13990 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I BER92_RS13990 IPR019999 Anthranilate synthase component I-like BER92_RS13995 IPR016039 Thiolase-like BER92_RS13995 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BER92_RS13995 IPR014030 Beta-ketoacyl synthase, N-terminal BER92_RS13995 IPR018201 Beta-ketoacyl synthase, active site BER92_RS13995 IPR000794 Beta-ketoacyl synthase BER92_RS13995 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 BER92_RS13995 IPR014031 Beta-ketoacyl synthase, C-terminal BER92_RS14000 IPR003231 Acyl carrier protein (ACP) BER92_RS14000 IPR009081 Phosphopantetheine binding ACP domain BER92_RS14000 IPR006162 Phosphopantetheine attachment site BER92_RS14000 IPR036736 ACP-like superfamily BER92_RS14005 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase BER92_RS14005 IPR036291 NAD(P)-binding domain superfamily BER92_RS14005 IPR020904 Short-chain dehydrogenase/reductase, conserved site BER92_RS14005 IPR002347 Short-chain dehydrogenase/reductase SDR BER92_RS14010 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BER92_RS14010 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BER92_RS14010 IPR024925 Malonyl CoA-acyl carrier protein transacylase BER92_RS14010 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type BER92_RS14010 IPR014043 Acyl transferase BER92_RS14010 IPR001227 Acyl transferase domain superfamily BER92_RS14015 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BER92_RS14015 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 BER92_RS14015 IPR016039 Thiolase-like BER92_RS14015 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal BER92_RS14020 IPR002677 Ribosomal protein L32p BER92_RS14020 IPR011332 Zinc-binding ribosomal protein BER92_RS14025 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria BER92_RS14025 IPR003772 Large ribosomal RNA subunit accumulation protein YceD BER92_RS14030 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein BER92_RS14030 IPR029001 Inosine triphosphate pyrophosphatase-like BER92_RS14040 IPR029044 Nucleotide-diphospho-sugar transferases BER92_RS14050 IPR011703 ATPase, AAA-3 BER92_RS14050 IPR041628 ChlI/MoxR, AAA lid domain BER92_RS14050 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS14060 IPR038765 Papain-like cysteine peptidase superfamily BER92_RS14060 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal BER92_RS14060 IPR025403 Domain of unknown function DUF4129 BER92_RS14060 IPR002931 Transglutaminase-like BER92_RS14070 IPR001310 Histidine triad (HIT) protein BER92_RS14070 IPR019808 Histidine triad, conserved site BER92_RS14070 IPR036265 HIT-like superfamily BER92_RS14070 IPR011146 HIT-like domain BER92_RS14075 IPR023627 Recombination protein RecR BER92_RS14075 IPR023628 Recombination protein RecR, C4-type zinc finger BER92_RS14075 IPR015967 Recombination protein RecR, conserved site BER92_RS14075 IPR006171 TOPRIM domain BER92_RS14075 IPR034137 RecR, TOPRIM domain BER92_RS14075 IPR000093 DNA recombination protein RecR BER92_RS14080 IPR004401 Nucleoid-associated protein YbaB/EbfC family BER92_RS14080 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily BER92_RS14085 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily BER92_RS14085 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS14085 IPR021029 DNA polymerase III, tau subunit, domain V BER92_RS14085 IPR012763 DNA polymerase III, subunit gamma/ tau BER92_RS14085 IPR022754 DNA polymerase III, gamma subunit, domain III BER92_RS14085 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV BER92_RS14085 IPR001270 ClpA/B family BER92_RS14085 IPR003593 AAA+ ATPase domain BER92_RS14085 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal BER92_RS14100 IPR003448 Molybdopterin biosynthesis MoaE BER92_RS14100 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily BER92_RS14110 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain BER92_RS14110 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily BER92_RS14110 IPR023045 Molybdenum cofactor biosynthesis C BER92_RS14115 IPR007197 Radical SAM BER92_RS14115 IPR010505 Molybdenum cofactor synthesis C-terminal BER92_RS14115 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site BER92_RS14115 IPR013483 Molybdenum cofactor biosynthesis protein A BER92_RS14115 IPR006638 Elp3/MiaB/NifB BER92_RS14115 IPR013785 Aldolase-type TIM barrel BER92_RS14120 IPR013471 Ribonuclease Z/BN BER92_RS14120 IPR001279 Metallo-beta-lactamase BER92_RS14120 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BER92_RS14125 IPR011009 Protein kinase-like domain superfamily BER92_RS14125 IPR022826 3-deoxy-D-manno-octulosonic acid kinase BER92_RS14130 IPR002201 Glycosyl transferase, family 9 BER92_RS14145 IPR001932 PPM-type phosphatase domain BER92_RS14145 IPR036457 PPM-type phosphatase domain superfamily BER92_RS14145 IPR015655 Protein phosphatase 2C family BER92_RS14150 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain BER92_RS14150 IPR006309 DNA polymerase 3, epsilon subunit BER92_RS14150 IPR013520 Exonuclease, RNase T/DNA polymerase III BER92_RS14150 IPR012337 Ribonuclease H-like superfamily BER92_RS14150 IPR036397 Ribonuclease H superfamily BER92_RS14155 IPR022892 Ribonuclease HI BER92_RS14155 IPR002156 Ribonuclease H domain BER92_RS14155 IPR012337 Ribonuclease H-like superfamily BER92_RS14155 IPR036397 Ribonuclease H superfamily BER92_RS14165 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BER92_RS14165 IPR001279 Metallo-beta-lactamase BER92_RS14165 IPR017782 Hydroxyacylglutathione hydrolase BER92_RS14165 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain BER92_RS14165 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain BER92_RS14170 IPR018392 LysM domain BER92_RS14170 IPR038765 Papain-like cysteine peptidase superfamily BER92_RS14170 IPR036779 LysM domain superfamily BER92_RS14170 IPR007921 CHAP domain BER92_RS14180 IPR010979 Ribosomal protein S13-like, H2TH BER92_RS14180 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding BER92_RS14180 IPR035937 MutM-like, N-terminal BER92_RS14180 IPR020629 Formamidopyrimidine-DNA glycosylase BER92_RS14180 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain BER92_RS14180 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site BER92_RS14180 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type BER92_RS14180 IPR010663 Zinc finger, FPG/IleRS-type BER92_RS14185 IPR002469 Dipeptidylpeptidase IV, N-terminal domain BER92_RS14185 IPR011659 WD40-like Beta Propeller BER92_RS14185 IPR011042 Six-bladed beta-propeller, TolB-like BER92_RS14185 IPR029058 Alpha/Beta hydrolase fold BER92_RS14185 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain BER92_RS14190 IPR004813 Oligopeptide transporter, OPT superfamily BER92_RS14190 IPR004814 Oligopeptide transporter OPT BER92_RS14205 IPR002559 Transposase, IS4-like BER92_RS14220 IPR040982 DNA polymerase III alpha subunit finger domain BER92_RS14220 IPR023073 DNA polymerase, error-prone BER92_RS14220 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain BER92_RS14220 IPR004013 PHP domain BER92_RS14220 IPR003141 Polymerase/histidinol phosphatase, N-terminal BER92_RS14220 IPR004805 DNA polymerase III, alpha subunit BER92_RS14220 IPR016195 Polymerase/histidinol phosphatase-like BER92_RS14220 IPR029460 DNA polymerase, helix-hairpin-helix motif BER92_RS14235 IPR039418 LexA-like BER92_RS14235 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS14235 IPR006200 Transcription regulator LexA BER92_RS14235 IPR006197 Peptidase S24, LexA-like BER92_RS14235 IPR006199 LexA repressor, DNA-binding domain BER92_RS14235 IPR036286 LexA/Signal peptidase-like superfamily BER92_RS14235 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS14235 IPR015927 Peptidase S24/S26A/S26B/S26C BER92_RS14245 IPR002559 Transposase, IS4-like BER92_RS14270 IPR012675 Beta-grasp domain superfamily BER92_RS14270 IPR006311 Twin-arginine translocation pathway, signal sequence BER92_RS14270 IPR036884 [2Fe-2S]-binding domain superfamily BER92_RS14270 IPR036010 2Fe-2S ferredoxin-like superfamily BER92_RS14270 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain BER92_RS14270 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site BER92_RS14270 IPR002888 [2Fe-2S]-binding BER92_RS14275 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily BER92_RS14275 IPR016166 FAD-binding domain, PCMH-type BER92_RS14275 IPR002346 Molybdopterin dehydrogenase, FAD-binding BER92_RS14275 IPR016169 FAD-binding, type PCMH, subdomain 2 BER92_RS14275 IPR036318 FAD-binding, type PCMH-like superfamily BER92_RS14275 IPR005107 CO dehydrogenase flavoprotein, C-terminal BER92_RS14280 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead BER92_RS14280 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily BER92_RS14280 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding BER92_RS14280 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily BER92_RS14285 IPR036291 NAD(P)-binding domain superfamily BER92_RS14285 IPR002347 Short-chain dehydrogenase/reductase SDR BER92_RS14285 IPR020904 Short-chain dehydrogenase/reductase, conserved site BER92_RS14295 IPR002559 Transposase, IS4-like BER92_RS14295 IPR008490 Transposase InsH, N-terminal BER92_RS14305 IPR002514 Transposase IS3/IS911family BER92_RS14305 IPR009057 Homeobox-like domain superfamily BER92_RS14320 IPR041552 UvrA DNA-binding domain BER92_RS14320 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS14320 IPR017871 ABC transporter, conserved site BER92_RS14330 IPR002559 Transposase, IS4-like BER92_RS14330 IPR008490 Transposase InsH, N-terminal BER92_RS14355 IPR008881 Trigger factor, ribosome-binding, bacterial BER92_RS14355 IPR036611 Trigger factor ribosome-binding domain superfamily BER92_RS14355 IPR027304 Trigger factor/SurA domain superfamily BER92_RS14355 IPR008880 Trigger factor, C-terminal BER92_RS14355 IPR037041 Trigger factor, C-terminal domain superfamily BER92_RS14355 IPR005215 Trigger factor BER92_RS14360 IPR029045 ClpP/crotonase-like domain superfamily BER92_RS14360 IPR033135 ClpP, histidine active site BER92_RS14360 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA BER92_RS14360 IPR018215 ClpP, Ser active site BER92_RS14360 IPR001907 ATP-dependent Clp protease proteolytic subunit BER92_RS14365 IPR010603 Zinc finger, ClpX C4-type BER92_RS14365 IPR038366 Zinc finger, ClpX C4-type superfamily BER92_RS14365 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS14365 IPR003959 ATPase, AAA-type, core BER92_RS14365 IPR019489 Clp ATPase, C-terminal BER92_RS14365 IPR004487 Clp protease, ATP-binding subunit ClpX BER92_RS14365 IPR003593 AAA+ ATPase domain BER92_RS14370 IPR008268 Peptidase S16, active site BER92_RS14370 IPR015947 PUA-like superfamily BER92_RS14370 IPR003959 ATPase, AAA-type, core BER92_RS14370 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS14370 IPR008269 Peptidase S16, Lon proteolytic domain BER92_RS14370 IPR027065 Lon protease BER92_RS14370 IPR004815 Lon protease, bacterial/eukaryotic-type BER92_RS14370 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BER92_RS14370 IPR027543 Lon protease, bacterial BER92_RS14370 IPR003111 Lon, substrate-binding domain BER92_RS14370 IPR020568 Ribosomal protein S5 domain 2-type fold BER92_RS14370 IPR003593 AAA+ ATPase domain BER92_RS14375 IPR000119 Histone-like DNA-binding protein BER92_RS14375 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily BER92_RS14375 IPR020816 Histone-like DNA-binding protein, conserved site BER92_RS14395 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site BER92_RS14395 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type BER92_RS14420 IPR013785 Aldolase-type TIM barrel BER92_RS14420 IPR007197 Radical SAM BER92_RS14420 IPR024924 7-carboxy-7-deazaguanine synthase-like BER92_RS14430 IPR006690 Outer membrane protein, OmpA-like, conserved site BER92_RS14430 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal BER92_RS14430 IPR039001 Peptidoglycan-associated lipoprotein BER92_RS14430 IPR006664 Outer membrane protein, bacterial BER92_RS14430 IPR006665 OmpA-like domain BER92_RS14430 IPR036737 OmpA-like domain superfamily BER92_RS14435 IPR011042 Six-bladed beta-propeller, TolB-like BER92_RS14435 IPR011659 WD40-like Beta Propeller BER92_RS14435 IPR014167 Tol-Pal system protein TolB BER92_RS14435 IPR007195 TolB, N-terminal BER92_RS14435 IPR036752 TolB, N-terminal domain superfamily BER92_RS14445 IPR003400 Biopolymer transport protein ExbD/TolR BER92_RS14445 IPR014168 Tol-Pal system protein TolR BER92_RS14450 IPR002898 MotA/TolQ/ExbB proton channel BER92_RS14450 IPR014163 Tol-Pal system, TolQ BER92_RS14455 IPR006683 Thioesterase domain BER92_RS14455 IPR029069 HotDog domain superfamily BER92_RS14455 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site BER92_RS14455 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase BER92_RS14455 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family BER92_RS14460 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS14460 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS14460 IPR008823 RuvB C-terminal winged helix domain BER92_RS14460 IPR008824 RuvB-like P-loop domain BER92_RS14460 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS14460 IPR003593 AAA+ ATPase domain BER92_RS14460 IPR041445 RuvB, AAA lid domain BER92_RS14460 IPR004605 DNA helicase, Holliday junction RuvB-type BER92_RS14465 IPR003855 Potassium transporter BER92_RS14465 IPR023051 Potassium uptake protein, low affinity, Kup BER92_RS14470 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial BER92_RS14470 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 BER92_RS14470 IPR012340 Nucleic acid-binding, OB-fold BER92_RS14470 IPR000085 Bacterial DNA recombination protein RuvA BER92_RS14470 IPR011114 Holliday junction DNA helicase RuvA, C-terminal BER92_RS14470 IPR036267 RuvA, C-terminal domain superfamily BER92_RS14470 IPR010994 RuvA domain 2-like BER92_RS14475 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site BER92_RS14475 IPR012337 Ribonuclease H-like superfamily BER92_RS14475 IPR036397 Ribonuclease H superfamily BER92_RS14475 IPR002176 Crossover junction endodeoxyribonuclease RuvC BER92_RS14480 IPR026564 Transcriptional regulator TACO1-like, domain 3 BER92_RS14480 IPR029072 YebC-like BER92_RS14480 IPR002876 Transcriptional regulator TACO1-like BER92_RS14480 IPR017856 Integrase-like, N-terminal BER92_RS14495 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type BER92_RS14495 IPR012340 Nucleic acid-binding, OB-fold BER92_RS14495 IPR029351 GAD domain BER92_RS14495 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb BER92_RS14495 IPR004115 GAD-like domain superfamily BER92_RS14495 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) BER92_RS14495 IPR006195 Aminoacyl-tRNA synthetase, class II BER92_RS14495 IPR004524 Aspartate-tRNA ligase, type 1 BER92_RS14510 IPR023346 Lysozyme-like domain superfamily BER92_RS14510 IPR031304 Transglycosylase SLT domain 2 BER92_RS14510 IPR011757 Lytic transglycosylase MltB BER92_RS14515 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS14515 IPR032781 ABC-transporter extension domain BER92_RS14515 IPR003439 ABC transporter-like BER92_RS14515 IPR017871 ABC transporter, conserved site BER92_RS14515 IPR003593 AAA+ ATPase domain BER92_RS14520 IPR000531 TonB-dependent receptor-like, beta-barrel BER92_RS14520 IPR012910 TonB-dependent receptor, plug domain BER92_RS14520 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BER92_RS14520 IPR010917 TonB-dependent receptor, conserved site BER92_RS14520 IPR010105 TonB-dependent siderophore receptor BER92_RS14520 IPR037066 TonB-dependent receptor, plug domain superfamily BER92_RS14520 IPR039426 Vitamin B12 transporter BtuB-like BER92_RS14535 IPR039426 Vitamin B12 transporter BtuB-like BER92_RS14535 IPR012910 TonB-dependent receptor, plug domain BER92_RS14535 IPR037066 TonB-dependent receptor, plug domain superfamily BER92_RS14535 IPR000531 TonB-dependent receptor-like, beta-barrel BER92_RS14535 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BER92_RS14535 IPR010917 TonB-dependent receptor, conserved site BER92_RS14535 IPR010105 TonB-dependent siderophore receptor BER92_RS14540 IPR000531 TonB-dependent receptor-like, beta-barrel BER92_RS14540 IPR039426 Vitamin B12 transporter BtuB-like BER92_RS14540 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BER92_RS14540 IPR010101 TonB-dependent vitamin B12 transporter BtuB BER92_RS14540 IPR037066 TonB-dependent receptor, plug domain superfamily BER92_RS14540 IPR012910 TonB-dependent receptor, plug domain BER92_RS14540 IPR010916 TonB box, conserved site BER92_RS14540 IPR010917 TonB-dependent receptor, conserved site BER92_RS14545 IPR006153 Cation/H+ exchanger BER92_RS14545 IPR038770 Sodium/solute symporter superfamily BER92_RS14545 IPR004771 K+/H+ exchanger BER92_RS14545 IPR003148 Regulator of K+ conductance, N-terminal BER92_RS14545 IPR036291 NAD(P)-binding domain superfamily BER92_RS14555 IPR008490 Transposase InsH, N-terminal BER92_RS14575 IPR004840 Amino acid permease, conserved site BER92_RS14575 IPR004841 Amino acid permease/ SLC12A domain BER92_RS14580 IPR008490 Transposase InsH, N-terminal BER92_RS14585 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain BER92_RS14585 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding BER92_RS14585 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site BER92_RS14585 IPR004090 Chemotaxis methyl-accepting receptor BER92_RS14585 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily BER92_RS14585 IPR003660 HAMP domain BER92_RS14595 IPR000073 Alpha/beta hydrolase fold-1 BER92_RS14595 IPR005945 Proline-specific peptidase BER92_RS14595 IPR002410 Peptidase S33 BER92_RS14595 IPR029058 Alpha/Beta hydrolase fold BER92_RS14600 IPR011006 CheY-like superfamily BER92_RS14600 IPR000792 Transcription regulator LuxR, C-terminal BER92_RS14600 IPR016032 Signal transduction response regulator, C-terminal effector BER92_RS14605 IPR004841 Amino acid permease/ SLC12A domain BER92_RS14610 IPR009003 Peptidase S1, PA clan BER92_RS14635 IPR016185 Pre-ATP-grasp domain superfamily BER92_RS14635 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain BER92_RS14660 IPR007157 PspA/IM30 BER92_RS14675 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site BER92_RS14675 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative BER92_RS14675 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal BER92_RS14675 IPR012349 FMN-binding split barrel BER92_RS14675 IPR000659 Pyridoxamine 5'-phosphate oxidase BER92_RS14680 IPR000623 Shikimate kinase/Threonine synthase-like 1 BER92_RS14680 IPR023000 Shikimate kinase, conserved site BER92_RS14680 IPR031322 Shikimate kinase/gluconokinase BER92_RS14680 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS14685 IPR030960 3-dehydroquinate synthase domain BER92_RS14685 IPR030963 3-dehydroquinate synthase family BER92_RS14685 IPR016037 3-dehydroquinate synthase AroB BER92_RS14695 IPR038071 UROD/MetE-like superfamily BER92_RS14695 IPR006361 Uroporphyrinogen decarboxylase HemE BER92_RS14695 IPR000257 Uroporphyrinogen decarboxylase (URO-D) BER92_RS14700 IPR023721 Multidrug resistance protein MdtD BER92_RS14700 IPR036259 MFS transporter superfamily BER92_RS14700 IPR004638 Drug resistance transporter EmrB-like BER92_RS14700 IPR011701 Major facilitator superfamily BER92_RS14700 IPR020846 Major facilitator superfamily domain BER92_RS14705 IPR002559 Transposase, IS4-like BER92_RS14705 IPR008490 Transposase InsH, N-terminal BER92_RS14710 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS14710 IPR033414 Periplasmic sensor domain BER92_RS14710 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS14710 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BER92_RS14710 IPR001789 Signal transduction response regulator, receiver domain BER92_RS14710 IPR011006 CheY-like superfamily BER92_RS14710 IPR003660 HAMP domain BER92_RS14710 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS14710 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS14710 IPR005467 Histidine kinase domain BER92_RS14710 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS14710 IPR036641 HPT domain superfamily BER92_RS14715 IPR005467 Histidine kinase domain BER92_RS14715 IPR015387 LuxQ, periplasmic BER92_RS14715 IPR011006 CheY-like superfamily BER92_RS14715 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS14715 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS14715 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS14715 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS14715 IPR029151 Periplasmic sensor-like domain superfamily BER92_RS14715 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS14715 IPR001789 Signal transduction response regulator, receiver domain BER92_RS14735 IPR011006 CheY-like superfamily BER92_RS14735 IPR001789 Signal transduction response regulator, receiver domain BER92_RS14740 IPR035965 PAS domain superfamily BER92_RS14740 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS14740 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS14740 IPR000700 PAS-associated, C-terminal BER92_RS14740 IPR001610 PAC motif BER92_RS14740 IPR000014 PAS domain BER92_RS14740 IPR001789 Signal transduction response regulator, receiver domain BER92_RS14740 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS14740 IPR005467 Histidine kinase domain BER92_RS14740 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS14740 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS14740 IPR011006 CheY-like superfamily BER92_RS14770 IPR018062 HTH domain AraC-type, conserved site BER92_RS14770 IPR018060 DNA binding HTH domain, AraC-type BER92_RS14780 IPR008523 Protein of unknown function DUF805 BER92_RS14785 IPR041166 LapB, rubredoxin metal binding domain BER92_RS14785 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BER92_RS14785 IPR020568 Ribosomal protein S5 domain 2-type fold BER92_RS14785 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain BER92_RS14785 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS14785 IPR003593 AAA+ ATPase domain BER92_RS14785 IPR004504 DNA repair protein RadA BER92_RS14795 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes BER92_RS14795 IPR014210 Cytochrome o ubiquinol oxidase subunit IV BER92_RS14800 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle BER92_RS14800 IPR035973 Cytochrome c oxidase subunit III-like superfamily BER92_RS14800 IPR024791 Cytochrome c oxidase subunit III BER92_RS14800 IPR000298 Cytochrome c oxidase subunit III-like BER92_RS14800 IPR014206 Cytochrome o ubiquinol oxidase, subunit III BER92_RS14800 IPR033946 Ubiquinol oxidase subunit III domain BER92_RS14805 IPR014207 Cytochrome o ubiquinol oxidase, subunit I BER92_RS14805 IPR000883 Cytochrome c oxidase subunit I BER92_RS14805 IPR036927 Cytochrome c oxidase-like, subunit I superfamily BER92_RS14805 IPR023616 Cytochrome c oxidase-like, subunit I domain BER92_RS14805 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site BER92_RS14810 IPR002429 Cytochrome c oxidase subunit II-like C-terminal BER92_RS14810 IPR006333 Cytochrome o ubiquinol oxidase subunit II BER92_RS14810 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain BER92_RS14810 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain BER92_RS14810 IPR008972 Cupredoxin BER92_RS14810 IPR010514 COX aromatic rich motif BER92_RS14810 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily BER92_RS14820 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase BER92_RS14825 IPR001872 Peptidase A8, signal peptidase II BER92_RS14830 IPR002300 Aminoacyl-tRNA synthetase, class Ia BER92_RS14830 IPR002301 Isoleucine-tRNA ligase BER92_RS14830 IPR010663 Zinc finger, FPG/IleRS-type BER92_RS14830 IPR023585 Isoleucine-tRNA ligase, type 1 BER92_RS14830 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding BER92_RS14830 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BER92_RS14830 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS14830 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain BER92_RS14830 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BER92_RS14830 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain BER92_RS14835 IPR002606 Riboflavin kinase, bacterial BER92_RS14835 IPR023468 Riboflavin kinase BER92_RS14835 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic BER92_RS14835 IPR023465 Riboflavin kinase domain superfamily BER92_RS14835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS14835 IPR015864 FAD synthetase BER92_RS14840 IPR004268 Peptidoglycan biosynthesis protein MurJ BER92_RS14845 IPR036510 Ribosomal protein S20 superfamily BER92_RS14845 IPR002583 Ribosomal protein S20 BER92_RS14850 IPR031167 OBG-type guanine nucleotide-binding (G) domain BER92_RS14850 IPR006074 GTP1/OBG, conserved site BER92_RS14850 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS14850 IPR035101 GTP-binding protein, Obg-type BER92_RS14850 IPR006169 GTP1/OBG domain BER92_RS14850 IPR036726 GTP1/OBG domain superfamily BER92_RS14850 IPR006073 GTP binding domain BER92_RS14850 IPR014100 GTP-binding protein Obg/CgtA BER92_RS14855 IPR018261 Ribosomal protein L27, conserved site BER92_RS14855 IPR001684 Ribosomal protein L27 BER92_RS14860 IPR018258 Ribosomal protein L21, conserved site BER92_RS14860 IPR001787 Ribosomal protein L21 BER92_RS14860 IPR028909 Ribosomal protein L21-like BER92_RS14860 IPR036164 L21-like superfamily BER92_RS14865 IPR003439 ABC transporter-like BER92_RS14865 IPR017871 ABC transporter, conserved site BER92_RS14865 IPR041102 UvrA, interaction domain BER92_RS14865 IPR041552 UvrA DNA-binding domain BER92_RS14865 IPR004602 UvrABC system subunit A BER92_RS14865 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS14870 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family BER92_RS14870 IPR029069 HotDog domain superfamily BER92_RS14880 IPR029045 ClpP/crotonase-like domain superfamily BER92_RS14880 IPR001753 Enoyl-CoA hydratase/isomerase BER92_RS14885 IPR029069 HotDog domain superfamily BER92_RS14885 IPR003703 Acyl-CoA thioesterase BER92_RS14900 IPR014284 RNA polymerase sigma-70 like domain BER92_RS14900 IPR039425 RNA polymerase sigma-70 like BER92_RS14900 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 BER92_RS14900 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site BER92_RS14900 IPR007627 RNA polymerase sigma-70 region 2 BER92_RS14900 IPR013325 RNA polymerase sigma factor, region 2 BER92_RS14900 IPR013324 RNA polymerase sigma factor, region 3/4-like BER92_RS14900 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS14910 IPR016181 Acyl-CoA N-acyltransferase BER92_RS14910 IPR007472 N-end rule aminoacyl transferase, C-terminal BER92_RS14910 IPR030700 N-end rule aminoacyl transferase BER92_RS14910 IPR017138 Aspartate/glutamate leucyltransferase BER92_RS14910 IPR007471 N-end aminoacyl transferase, N-terminal BER92_RS14920 IPR008490 Transposase InsH, N-terminal BER92_RS14935 IPR009057 Homeobox-like domain superfamily BER92_RS14935 IPR002514 Transposase IS3/IS911family BER92_RS14940 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BER92_RS14940 IPR001509 NAD-dependent epimerase/dehydratase BER92_RS14940 IPR016185 Pre-ATP-grasp domain superfamily BER92_RS14940 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase BER92_RS14940 IPR011761 ATP-grasp fold BER92_RS14940 IPR013815 ATP-grasp fold, subdomain 1 BER92_RS14940 IPR011054 Rudiment single hybrid motif BER92_RS14970 IPR011257 DNA glycosylase BER92_RS14970 IPR003265 HhH-GPD domain BER92_RS14985 IPR011006 CheY-like superfamily BER92_RS14985 IPR016032 Signal transduction response regulator, C-terminal effector BER92_RS14985 IPR001789 Signal transduction response regulator, receiver domain BER92_RS14985 IPR000792 Transcription regulator LuxR, C-terminal BER92_RS14990 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS14990 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS14990 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain BER92_RS15000 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal BER92_RS15000 IPR013033 Septum formation inhibitor MinC BER92_RS15000 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily BER92_RS15000 IPR005526 Septum formation inhibitor MinC, C-terminal BER92_RS15000 IPR007874 Septum formation inhibitor MinC, N-terminal BER92_RS15000 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily BER92_RS15005 IPR010223 ATP binding protein MinD, bacterial-type BER92_RS15005 IPR025501 ATP binding protein MinD BER92_RS15005 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS15005 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain BER92_RS15010 IPR005527 Cell division topological specificity factor MinE BER92_RS15010 IPR036707 Cell division topological specificity factor MinE superfamily BER92_RS15020 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS15020 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS15020 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS15020 IPR005467 Histidine kinase domain BER92_RS15020 IPR013727 Two-component sensor kinase, N-terminal BER92_RS15020 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS15020 IPR003660 HAMP domain BER92_RS15020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS15025 IPR001867 OmpR/PhoB-type DNA-binding domain BER92_RS15025 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS15025 IPR039420 Transcriptional regulatory protein WalR-like BER92_RS15025 IPR011006 CheY-like superfamily BER92_RS15025 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response BER92_RS15025 IPR001789 Signal transduction response regulator, receiver domain BER92_RS15040 IPR017850 Alkaline-phosphatase-like, core domain superfamily BER92_RS15040 IPR012549 Phosphoethanolamine transferase, N-terminal BER92_RS15040 IPR000917 Sulfatase, N-terminal BER92_RS15040 IPR040423 Phosphoethanolamine transferase BER92_RS15060 IPR003437 Glycine dehydrogenase (decarboxylating) BER92_RS15060 IPR020581 Glycine cleavage system P protein BER92_RS15060 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS15060 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS15060 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BER92_RS15065 IPR020835 Catalase superfamily BER92_RS15065 IPR029062 Class I glutamine amidotransferase-like BER92_RS15065 IPR018028 Catalase, mono-functional, haem-containing BER92_RS15065 IPR024708 Catalase active site BER92_RS15065 IPR024712 Catalase, mono-functional, haem-containing, clade 2 BER92_RS15065 IPR011614 Catalase core domain BER92_RS15065 IPR037060 Catalase core domain superfamily BER92_RS15065 IPR002226 Catalase haem-binding site BER92_RS15065 IPR010582 Catalase immune-responsive domain BER92_RS15065 IPR041399 Large catalase, C-terminal domain BER92_RS15075 IPR037923 Transcription regulator HTH-like BER92_RS15075 IPR003313 AraC-type arabinose-binding/dimerisation domain BER92_RS15075 IPR018060 DNA binding HTH domain, AraC-type BER92_RS15075 IPR009057 Homeobox-like domain superfamily BER92_RS15075 IPR014710 RmlC-like jelly roll fold BER92_RS15085 IPR002559 Transposase, IS4-like BER92_RS15105 IPR008490 Transposase InsH, N-terminal BER92_RS15120 IPR011662 Secretin/TonB, short N-terminal domain BER92_RS15120 IPR010105 TonB-dependent siderophore receptor BER92_RS15120 IPR037066 TonB-dependent receptor, plug domain superfamily BER92_RS15120 IPR000531 TonB-dependent receptor-like, beta-barrel BER92_RS15120 IPR010916 TonB box, conserved site BER92_RS15120 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BER92_RS15120 IPR010917 TonB-dependent receptor, conserved site BER92_RS15120 IPR012910 TonB-dependent receptor, plug domain BER92_RS15130 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like BER92_RS15130 IPR022770 Ferric iron reductase FhuF domain BER92_RS15130 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal BER92_RS15135 IPR020846 Major facilitator superfamily domain BER92_RS15135 IPR036259 MFS transporter superfamily BER92_RS15135 IPR023692 Multidrug resistance protein MdtG BER92_RS15135 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG BER92_RS15135 IPR011701 Major facilitator superfamily BER92_RS15140 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like BER92_RS15140 IPR022770 Ferric iron reductase FhuF domain BER92_RS15140 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal BER92_RS15145 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal BER92_RS15145 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal BER92_RS15145 IPR022272 Lipocalin family conserved site BER92_RS15145 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal BER92_RS15145 IPR002433 Ornithine decarboxylase BER92_RS15145 IPR000183 Ornithine/DAP/Arg decarboxylase BER92_RS15145 IPR029066 PLP-binding barrel BER92_RS15150 IPR039426 Vitamin B12 transporter BtuB-like BER92_RS15150 IPR010917 TonB-dependent receptor, conserved site BER92_RS15150 IPR010101 TonB-dependent vitamin B12 transporter BtuB BER92_RS15150 IPR037066 TonB-dependent receptor, plug domain superfamily BER92_RS15150 IPR000531 TonB-dependent receptor-like, beta-barrel BER92_RS15150 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BER92_RS15150 IPR012910 TonB-dependent receptor, plug domain BER92_RS15160 IPR019489 Clp ATPase, C-terminal BER92_RS15160 IPR041546 ClpA/ClpB, AAA lid domain BER92_RS15160 IPR028299 ClpA/B, conserved site 2 BER92_RS15160 IPR001270 ClpA/B family BER92_RS15160 IPR004176 Clp, N-terminal BER92_RS15160 IPR003593 AAA+ ATPase domain BER92_RS15160 IPR003959 ATPase, AAA-type, core BER92_RS15160 IPR017730 Chaperonin ClpB BER92_RS15160 IPR036628 Clp, N-terminal domain superfamily BER92_RS15160 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS15160 IPR018368 ClpA/B, conserved site 1 BER92_RS15190 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BER92_RS15190 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BER92_RS15190 IPR037026 Vgr protein, OB-fold domain superfamily BER92_RS15190 IPR006531 Gp5 N-terminal BER92_RS15215 IPR037026 Vgr protein, OB-fold domain superfamily BER92_RS15215 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein BER92_RS15215 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset BER92_RS15215 IPR006531 Gp5 N-terminal BER92_RS15220 IPR001584 Integrase, catalytic core BER92_RS15220 IPR012337 Ribonuclease H-like superfamily BER92_RS15220 IPR036397 Ribonuclease H superfamily BER92_RS15220 IPR025948 HTH-like domain BER92_RS15225 IPR002514 Transposase IS3/IS911family BER92_RS15225 IPR009057 Homeobox-like domain superfamily BER92_RS15240 IPR008490 Transposase InsH, N-terminal BER92_RS15275 IPR008490 Transposase InsH, N-terminal BER92_RS15280 IPR024084 Isopropylmalate dehydrogenase-like domain BER92_RS15290 IPR011767 Glutaredoxin active site BER92_RS15290 IPR014025 Glutaredoxin subgroup BER92_RS15290 IPR011900 Glutaredoxin, GrxC BER92_RS15290 IPR036249 Thioredoxin-like superfamily BER92_RS15290 IPR002109 Glutaredoxin BER92_RS15300 IPR030873 Beta-barrel assembly-enhancing protease BER92_RS15300 IPR013026 Tetratricopeptide repeat-containing domain BER92_RS15300 IPR011990 Tetratricopeptide-like helical domain superfamily BER92_RS15300 IPR019734 Tetratricopeptide repeat BER92_RS15300 IPR001915 Peptidase M48 BER92_RS15305 IPR001789 Signal transduction response regulator, receiver domain BER92_RS15305 IPR001867 OmpR/PhoB-type DNA-binding domain BER92_RS15305 IPR011006 CheY-like superfamily BER92_RS15305 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS15305 IPR039420 Transcriptional regulatory protein WalR-like BER92_RS15305 IPR016032 Signal transduction response regulator, C-terminal effector BER92_RS15305 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB BER92_RS15310 IPR035965 PAS domain superfamily BER92_RS15310 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS15310 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS15310 IPR005467 Histidine kinase domain BER92_RS15310 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS15310 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS15310 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS15310 IPR000014 PAS domain BER92_RS15310 IPR021766 Phosphate regulon sensor protein PhoR BER92_RS15310 IPR013767 PAS fold BER92_RS15310 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR BER92_RS15315 IPR024953 Polyphosphate kinase middle domain BER92_RS15315 IPR025200 Polyphosphate kinase C-terminal domain 2 BER92_RS15315 IPR025198 Polyphosphate kinase N-terminal domain BER92_RS15315 IPR036832 Polyphosphate kinase N-terminal domain superfamily BER92_RS15315 IPR036830 Polyphosphate kinase middle domain superfamily BER92_RS15315 IPR041108 Polyphosphate kinase, C-terminal domain 1 BER92_RS15315 IPR003414 Polyphosphate kinase BER92_RS15320 IPR030673 Pyrophosphatase, GppA/Ppx-type BER92_RS15320 IPR022371 Exopolyphosphatase BER92_RS15320 IPR003695 Ppx/GppA phosphatase BER92_RS15330 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BER92_RS15330 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BER92_RS15335 IPR010138 UDP-2,3-diacylglucosamine hydrolase BER92_RS15335 IPR029052 Metallo-dependent phosphatase-like BER92_RS15335 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type BER92_RS15345 IPR024079 Metallopeptidase, catalytic domain superfamily BER92_RS15355 IPR007402 Protein of unknown function DUF455 BER92_RS15355 IPR011197 Uncharacterised conserved protein UCP012318 BER92_RS15355 IPR009078 Ferritin-like superfamily BER92_RS15360 IPR000836 Phosphoribosyltransferase domain BER92_RS15360 IPR029055 Nucleophile aminohydrolases, N-terminal BER92_RS15360 IPR029057 Phosphoribosyltransferase-like BER92_RS15360 IPR005854 Amidophosphoribosyltransferase BER92_RS15360 IPR035584 Amidophosphoribosyltransferase, N-terminal BER92_RS15360 IPR017932 Glutamine amidotransferase type 2 domain BER92_RS15375 IPR018109 Folylpolyglutamate synthetase, conserved site BER92_RS15375 IPR036565 Mur-like, catalytic domain superfamily BER92_RS15375 IPR036615 Mur ligase, C-terminal domain superfamily BER92_RS15375 IPR013221 Mur ligase, central BER92_RS15375 IPR001645 Folylpolyglutamate synthetase BER92_RS15375 IPR004101 Mur ligase, C-terminal BER92_RS15395 IPR008490 Transposase InsH, N-terminal BER92_RS15405 IPR008928 Six-hairpin glycosidase superfamily BER92_RS15405 IPR014718 Glycoside hydrolase-type carbohydrate-binding BER92_RS15405 IPR005887 Alpha-1,2-mannosidase, putative BER92_RS15405 IPR012939 Glycosyl hydrolase family 92 BER92_RS15405 IPR041371 Glycosyl hydrolase family 92 N-terminal domain BER92_RS15410 IPR031330 Glycoside hydrolase 35, catalytic domain BER92_RS15410 IPR008979 Galactose-binding-like domain superfamily BER92_RS15410 IPR026283 Beta-galactosidase 1-like BER92_RS15410 IPR019801 Glycoside hydrolase, family 35, conserved site BER92_RS15410 IPR017853 Glycoside hydrolase superfamily BER92_RS15410 IPR001944 Glycoside hydrolase, family 35 BER92_RS15455 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain BER92_RS15455 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS15455 IPR004546 Restriction endonuclease, type I, HsdM BER92_RS15455 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BER92_RS15455 IPR003356 DNA methylase, adenine-specific BER92_RS15455 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily BER92_RS15475 IPR014001 Helicase superfamily 1/2, ATP-binding domain BER92_RS15475 IPR021810 Protein of unknown function DUF3387 BER92_RS15475 IPR040980 SWI2/SNF2 ATPase BER92_RS15475 IPR004473 Restriction endonuclease, type I, HsdR BER92_RS15475 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal BER92_RS15475 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS15495 IPR002514 Transposase IS3/IS911family BER92_RS15495 IPR009057 Homeobox-like domain superfamily BER92_RS15515 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase BER92_RS15515 IPR000462 CDP-alcohol phosphatidyltransferase BER92_RS15525 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type BER92_RS15525 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain BER92_RS15525 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily BER92_RS15525 IPR002316 Proline-tRNA ligase, class IIa BER92_RS15525 IPR006195 Aminoacyl-tRNA synthetase, class II BER92_RS15525 IPR004154 Anticodon-binding BER92_RS15525 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) BER92_RS15525 IPR033730 Prokaryote proline-tRNA ligase core domain BER92_RS15525 IPR036621 Anticodon-binding domain superfamily BER92_RS15525 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 BER92_RS15540 IPR030802 ABC transporter permease MalE BER92_RS15540 IPR003453 ABC transport permease subunit MlaE, Proteobacteria BER92_RS15545 IPR003593 AAA+ ATPase domain BER92_RS15545 IPR003439 ABC transporter-like BER92_RS15545 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS15545 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl BER92_RS15545 IPR017871 ABC transporter, conserved site BER92_RS15550 IPR005586 ABC-type transport auxiliary lipoprotein component BER92_RS15550 IPR003399 Mce/MlaD BER92_RS15565 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BER92_RS15565 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS15565 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase BER92_RS15570 IPR007739 Rhamnan synthesis F BER92_RS15570 IPR032719 Glycosyltransferase WbsX BER92_RS15575 IPR004165 Coenzyme A transferase family I BER92_RS15575 IPR004164 Coenzyme A transferase active site BER92_RS15575 IPR037171 NagB/RpiA transferase-like BER92_RS15575 IPR012791 3-oxoacid CoA-transferase, subunit B BER92_RS15580 IPR012792 3-oxoacid CoA-transferase, subunit A BER92_RS15580 IPR004165 Coenzyme A transferase family I BER92_RS15580 IPR004163 Coenzyme A transferase binding site BER92_RS15580 IPR037171 NagB/RpiA transferase-like BER92_RS15585 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I BER92_RS15585 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III BER92_RS15585 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III BER92_RS15585 IPR005843 Alpha-D-phosphohexomutase, C-terminal BER92_RS15585 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily BER92_RS15585 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II BER92_RS15585 IPR016066 Alpha-D-phosphohexomutase, conserved site BER92_RS15585 IPR005841 Alpha-D-phosphohexomutase superfamily BER92_RS15590 IPR011051 RmlC-like cupin domain superfamily BER92_RS15590 IPR014710 RmlC-like jelly roll fold BER92_RS15590 IPR029044 Nucleotide-diphospho-sugar transferases BER92_RS15590 IPR005835 Nucleotidyl transferase domain BER92_RS15590 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal BER92_RS15590 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase BER92_RS15595 IPR005913 dTDP-4-dehydrorhamnose reductase family BER92_RS15595 IPR029903 RmlD-like substrate binding domain BER92_RS15595 IPR036291 NAD(P)-binding domain superfamily BER92_RS15600 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related BER92_RS15600 IPR011051 RmlC-like cupin domain superfamily BER92_RS15600 IPR014710 RmlC-like jelly roll fold BER92_RS15605 IPR005835 Nucleotidyl transferase domain BER92_RS15605 IPR029044 Nucleotide-diphospho-sugar transferases BER92_RS15605 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form BER92_RS15610 IPR036291 NAD(P)-binding domain superfamily BER92_RS15610 IPR016040 NAD(P)-binding domain BER92_RS15610 IPR005888 dTDP-glucose 4,6-dehydratase BER92_RS15615 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS15615 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site BER92_RS15615 IPR012255 Electron transfer flavoprotein, beta subunit BER92_RS15615 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal BER92_RS15615 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal BER92_RS15620 IPR029035 DHS-like NAD/FAD-binding domain superfamily BER92_RS15620 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal BER92_RS15620 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal BER92_RS15620 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site BER92_RS15620 IPR001308 Electron transfer flavoprotein alpha subunit/FixB BER92_RS15620 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal BER92_RS15620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS15630 IPR029044 Nucleotide-diphospho-sugar transferases BER92_RS15630 IPR001173 Glycosyltransferase 2-like BER92_RS15650 IPR001509 NAD-dependent epimerase/dehydratase BER92_RS15650 IPR036291 NAD(P)-binding domain superfamily BER92_RS15655 IPR006368 GDP-mannose 4,6-dehydratase BER92_RS15655 IPR016040 NAD(P)-binding domain BER92_RS15655 IPR036291 NAD(P)-binding domain superfamily BER92_RS15675 IPR011009 Protein kinase-like domain superfamily BER92_RS15675 IPR025714 Methyltransferase domain BER92_RS15675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS15675 IPR000719 Protein kinase domain BER92_RS15680 IPR017871 ABC transporter, conserved site BER92_RS15680 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS15680 IPR003593 AAA+ ATPase domain BER92_RS15680 IPR003439 ABC transporter-like BER92_RS15695 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS15695 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BER92_RS15695 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BER92_RS15695 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS15700 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BER92_RS15700 IPR001926 Pyridoxal-phosphate dependent enzyme BER92_RS15700 IPR005857 Cystathionine beta-synthase BER92_RS15700 IPR000644 CBS domain BER92_RS15720 IPR001482 Type II/IV secretion system protein BER92_RS15720 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS15720 IPR006321 Pilus retraction protein PilT BER92_RS15730 IPR036282 Glutathione S-transferase, C-terminal domain superfamily BER92_RS15730 IPR036249 Thioredoxin-like superfamily BER92_RS15730 IPR040079 Glutathione Transferase family BER92_RS15730 IPR004045 Glutathione S-transferase, N-terminal BER92_RS15730 IPR004046 Glutathione S-transferase, C-terminal BER92_RS15730 IPR005955 Glutathione S-transferases, class Zeta BER92_RS15730 IPR010987 Glutathione S-transferase, C-terminal-like BER92_RS15730 IPR034330 Glutathione S-transferases, class Zeta , C-terminal BER92_RS15730 IPR034333 Glutathione S-transferases, class Zeta , N-terminal BER92_RS15740 IPR001650 Helicase, C-terminal BER92_RS15740 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS15740 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BER92_RS15740 IPR014014 RNA helicase, DEAD-box type, Q motif BER92_RS15740 IPR011545 DEAD/DEAH box helicase domain BER92_RS15740 IPR014001 Helicase superfamily 1/2, ATP-binding domain BER92_RS15740 IPR028622 ATP-dependent RNA helicase RhlE BER92_RS15745 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily BER92_RS15745 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family BER92_RS15755 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS15755 IPR004472 Dethiobiotin synthase BioD BER92_RS15760 IPR029016 GAF-like domain superfamily BER92_RS15760 IPR003018 GAF domain BER92_RS15760 IPR000614 Free Met sulfoxide reductase conserved site BER92_RS15775 IPR002559 Transposase, IS4-like BER92_RS15775 IPR008490 Transposase InsH, N-terminal BER92_RS15780 IPR009057 Homeobox-like domain superfamily BER92_RS15780 IPR002514 Transposase IS3/IS911family BER92_RS15785 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BER92_RS15785 IPR037512 Phosphoglycolate phosphatase, prokaryotic BER92_RS15785 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic BER92_RS15785 IPR023214 HAD superfamily BER92_RS15785 IPR041492 Haloacid dehalogenase-like hydrolase BER92_RS15785 IPR006439 HAD hydrolase, subfamily IA BER92_RS15785 IPR036412 HAD-like superfamily BER92_RS15785 IPR006549 HAD-superfamily hydrolase,subfamily IIIA BER92_RS15790 IPR036775 DNA polymerase, Y-family, little finger domain superfamily BER92_RS15790 IPR001126 UmuC domain BER92_RS15790 IPR017961 DNA polymerase, Y-family, little finger domain BER92_RS15790 IPR022880 DNA polymerase IV BER92_RS15800 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ BER92_RS15800 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA BER92_RS15800 IPR029069 HotDog domain superfamily BER92_RS15805 IPR018201 Beta-ketoacyl synthase, active site BER92_RS15805 IPR000794 Beta-ketoacyl synthase BER92_RS15805 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BER92_RS15805 IPR016039 Thiolase-like BER92_RS15805 IPR014030 Beta-ketoacyl synthase, N-terminal BER92_RS15805 IPR014031 Beta-ketoacyl synthase, C-terminal BER92_RS15815 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BER92_RS15815 IPR001567 Peptidase M3A/M3B catalytic domain BER92_RS15830 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BER92_RS15830 IPR033138 Multicopper oxidases, conserved site BER92_RS15830 IPR034282 Copper resistance protein CopA, second cupredoxin domain BER92_RS15830 IPR034284 Copper resistance protein, first cupredoxin domain BER92_RS15830 IPR006376 Copper-resistance protein CopA BER92_RS15830 IPR034279 Copper resistance protein, third cupredoxin domain BER92_RS15830 IPR011707 Multicopper oxidase, type 3 BER92_RS15830 IPR002355 Multicopper oxidase, copper-binding site BER92_RS15830 IPR001117 Multicopper oxidase, type 1 BER92_RS15830 IPR008972 Cupredoxin BER92_RS15830 IPR006311 Twin-arginine translocation pathway, signal sequence BER92_RS15830 IPR011706 Multicopper oxidase, type 2 BER92_RS15835 IPR007939 Copper resistance B precursor BER92_RS15840 IPR018146 Glyoxalase I, conserved site BER92_RS15840 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BER92_RS15840 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BER92_RS15840 IPR037523 Vicinal oxygen chelate (VOC) domain BER92_RS15840 IPR004361 Glyoxalase I BER92_RS15850 IPR029055 Nucleophile aminohydrolases, N-terminal BER92_RS15850 IPR001347 Sugar isomerase (SIS) BER92_RS15850 IPR035490 GlmS/FrlB, SIS domain 2 BER92_RS15850 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising BER92_RS15850 IPR017932 Glutamine amidotransferase type 2 domain BER92_RS15850 IPR035466 GlmS/AgaS, SIS domain 1 BER92_RS15865 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS15865 IPR005467 Histidine kinase domain BER92_RS15865 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS15865 IPR000700 PAS-associated, C-terminal BER92_RS15865 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS15865 IPR035965 PAS domain superfamily BER92_RS15865 IPR013767 PAS fold BER92_RS15865 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS15865 IPR003660 HAMP domain BER92_RS15865 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS15865 IPR000014 PAS domain BER92_RS15875 IPR029044 Nucleotide-diphospho-sugar transferases BER92_RS15875 IPR038009 GlmU, C-terminal LbH domain BER92_RS15875 IPR018357 Hexapeptide transferase, conserved site BER92_RS15875 IPR001451 Hexapeptide repeat BER92_RS15875 IPR025877 MobA-like NTP transferase BER92_RS15875 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase BER92_RS15875 IPR011004 Trimeric LpxA-like superfamily BER92_RS15885 IPR036263 Chorismate mutase type II superfamily BER92_RS15885 IPR008240 Chorismate mutase, periplasmic BER92_RS15885 IPR002701 Chorismate mutase II, prokaryotic-type BER92_RS15890 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal BER92_RS15890 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain BER92_RS15890 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit BER92_RS15890 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily BER92_RS15890 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal BER92_RS15895 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal BER92_RS15895 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily BER92_RS15895 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS15895 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BER92_RS15895 IPR003593 AAA+ ATPase domain BER92_RS15895 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BER92_RS15895 IPR005722 ATP synthase, F1 complex, beta subunit BER92_RS15895 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain BER92_RS15900 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily BER92_RS15900 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site BER92_RS15900 IPR000131 ATP synthase, F1 complex, gamma subunit BER92_RS15905 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily BER92_RS15905 IPR000793 ATP synthase, alpha subunit, C-terminal BER92_RS15905 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily BER92_RS15905 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain BER92_RS15905 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS15905 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain BER92_RS15905 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily BER92_RS15905 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain BER92_RS15905 IPR005294 ATP synthase, F1 complex, alpha subunit BER92_RS15905 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site BER92_RS15910 IPR000711 ATPase, OSCP/delta subunit BER92_RS15910 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily BER92_RS15915 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily BER92_RS15915 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast BER92_RS15915 IPR005864 ATP synthase, F0 complex, subunit b, bacterial BER92_RS15920 IPR035921 F/V-ATP synthase subunit C superfamily BER92_RS15920 IPR002379 V-ATPase proteolipid subunit C-like domain BER92_RS15920 IPR038662 F1F0 ATP synthase subunit C superfamily BER92_RS15920 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site BER92_RS15920 IPR000454 ATP synthase, F0 complex, subunit C BER92_RS15920 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast BER92_RS15925 IPR000568 ATP synthase, F0 complex, subunit A BER92_RS15925 IPR035908 ATP synthase, F0 complex, subunit A superfamily BER92_RS15925 IPR023011 ATP synthase, F0 complex, subunit A, active site BER92_RS15940 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS15940 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily BER92_RS15940 IPR006258 Dihydrolipoamide dehydrogenase BER92_RS15940 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I BER92_RS15940 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BER92_RS15940 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site BER92_RS15940 IPR023753 FAD/NAD(P)-binding domain BER92_RS15945 IPR004167 Peripheral subunit-binding domain BER92_RS15945 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site BER92_RS15945 IPR036625 E3-binding domain superfamily BER92_RS15945 IPR011053 Single hybrid motif BER92_RS15945 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain BER92_RS15945 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex BER92_RS15945 IPR000089 Biotin/lipoyl attachment BER92_RS15945 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily BER92_RS15970 IPR004872 Lipoprotein NlpA family BER92_RS15975 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BER92_RS15975 IPR035906 MetI-like superfamily BER92_RS15980 IPR018449 NIL domain BER92_RS15980 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal BER92_RS15980 IPR017871 ABC transporter, conserved site BER92_RS15980 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain BER92_RS15980 IPR026253 Methionine import ATP-binding protein MetN BER92_RS15980 IPR003593 AAA+ ATPase domain BER92_RS15980 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS15980 IPR003439 ABC transporter-like BER92_RS15985 IPR035570 UPF0234, N-terminal BER92_RS15985 IPR036183 YajQ-like superfamily BER92_RS15985 IPR007551 Protein of unknown function DUF520 BER92_RS15985 IPR035571 UPF0234-like, C-terminal BER92_RS16020 IPR002559 Transposase, IS4-like BER92_RS16030 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BER92_RS16030 IPR006145 Pseudouridine synthase, RsuA/RluA BER92_RS16030 IPR020103 Pseudouridine synthase, catalytic domain superfamily BER92_RS16030 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain BER92_RS16030 IPR036986 RNA-binding S4 domain superfamily BER92_RS16030 IPR002942 RNA-binding S4 domain BER92_RS16030 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BER92_RS16035 IPR002052 DNA methylase, N-6 adenine-specific, conserved site BER92_RS16035 IPR023543 rRNA small subunit methyltransferase C BER92_RS16035 IPR013675 Methyltransferase small, N-terminal BER92_RS16035 IPR007848 Methyltransferase small domain BER92_RS16035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS16045 IPR012938 Glucose/Sorbosone dehydrogenase BER92_RS16045 IPR011042 Six-bladed beta-propeller, TolB-like BER92_RS16045 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase BER92_RS16055 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS16055 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS16055 IPR005467 Histidine kinase domain BER92_RS16055 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS16055 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS16055 IPR000014 PAS domain BER92_RS16055 IPR035965 PAS domain superfamily BER92_RS16055 IPR013767 PAS fold BER92_RS16055 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS16075 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal BER92_RS16075 IPR000821 Alanine racemase BER92_RS16075 IPR001608 Alanine racemase, N-terminal BER92_RS16075 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site BER92_RS16075 IPR011079 Alanine racemase, C-terminal BER92_RS16075 IPR029066 PLP-binding barrel BER92_RS16080 IPR006076 FAD dependent oxidoreductase BER92_RS16080 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS16080 IPR023080 D-amino acid dehydrogenase DadA BER92_RS16085 IPR019888 Transcription regulator AsnC-type BER92_RS16085 IPR011008 Dimeric alpha-beta barrel BER92_RS16085 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BER92_RS16085 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BER92_RS16085 IPR011991 ArsR-like helix-turn-helix domain BER92_RS16085 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS16085 IPR000485 AsnC-type HTH domain BER92_RS16085 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS16095 IPR002579 Peptide methionine sulphoxide reductase MrsB BER92_RS16095 IPR028427 Peptide methionine sulfoxide reductase BER92_RS16095 IPR011057 Mss4-like superfamily BER92_RS16100 IPR000540 Flagellar motor protein MotA, conserved site BER92_RS16100 IPR022522 Flagellar motor stator, MotA BER92_RS16100 IPR002898 MotA/TolQ/ExbB proton channel BER92_RS16105 IPR036737 OmpA-like domain superfamily BER92_RS16105 IPR025713 Motility protein B, N-terminal domain BER92_RS16105 IPR006665 OmpA-like domain BER92_RS16175 IPR012006 tRNA nucleotidyltransferase, proteobacteria BER92_RS16175 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain BER92_RS16175 IPR002646 Poly A polymerase, head domain BER92_RS16175 IPR006674 HD domain BER92_RS16175 IPR003607 HD/PDEase domain BER92_RS16185 IPR024570 Murein transglycosylase-C, N-terminal BER92_RS16185 IPR000189 Prokaryotic transglycosylase, active site BER92_RS16185 IPR023664 Murein transglycosylase-C BER92_RS16185 IPR023346 Lysozyme-like domain superfamily BER92_RS16185 IPR008258 Transglycosylase SLT domain 1 BER92_RS16200 IPR008490 Transposase InsH, N-terminal BER92_RS16205 IPR012337 Ribonuclease H-like superfamily BER92_RS16205 IPR036397 Ribonuclease H superfamily BER92_RS16205 IPR025948 HTH-like domain BER92_RS16205 IPR001584 Integrase, catalytic core BER92_RS16255 IPR018509 Dehydroquinase, class II, conserved site BER92_RS16255 IPR001874 Dehydroquinase, class II BER92_RS16255 IPR036441 Dehydroquinase, class II superfamily BER92_RS16260 IPR001882 Biotin-binding site BER92_RS16260 IPR001249 Acetyl-CoA biotin carboxyl carrier BER92_RS16260 IPR000089 Biotin/lipoyl attachment BER92_RS16260 IPR011053 Single hybrid motif BER92_RS16270 IPR005481 Biotin carboxylase-like, N-terminal domain BER92_RS16270 IPR013815 ATP-grasp fold, subdomain 1 BER92_RS16270 IPR011764 Biotin carboxylation domain BER92_RS16270 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase BER92_RS16270 IPR011761 ATP-grasp fold BER92_RS16270 IPR016185 Pre-ATP-grasp domain superfamily BER92_RS16270 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain BER92_RS16270 IPR005482 Biotin carboxylase, C-terminal BER92_RS16270 IPR011054 Rudiment single hybrid motif BER92_RS16275 IPR004498 Ribosomal protein L11 methyltransferase BER92_RS16275 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS16285 IPR001387 Cro/C1-type helix-turn-helix domain BER92_RS16285 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BER92_RS16295 IPR009057 Homeobox-like domain superfamily BER92_RS16295 IPR002197 DNA binding HTH domain, Fis-type BER92_RS16295 IPR005412 DNA-binding protein Fis BER92_RS16300 IPR040231 Ice nucleation protein BER92_RS16300 IPR040231 Ice nucleation protein BER92_RS16300 IPR000258 Bacterial ice-nucleation, octamer repeat BER92_RS16300 IPR000258 Bacterial ice-nucleation, octamer repeat BER92_RS16305 IPR024051 AICAR transformylase, duplicated domain superfamily BER92_RS16305 IPR016193 Cytidine deaminase-like BER92_RS16305 IPR011607 Methylglyoxal synthase-like domain BER92_RS16305 IPR002695 Bifunctional purine biosynthesis protein PurH-like BER92_RS16305 IPR036914 Methylglyoxal synthase-like domain superfamily BER92_RS16310 IPR000115 Phosphoribosylglycinamide synthetase BER92_RS16310 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily BER92_RS16310 IPR020559 Phosphoribosylglycinamide synthetase, conserved site BER92_RS16310 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BER92_RS16310 IPR020560 Phosphoribosylglycinamide synthetase, C-domain BER92_RS16310 IPR011761 ATP-grasp fold BER92_RS16310 IPR011054 Rudiment single hybrid motif BER92_RS16310 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal BER92_RS16310 IPR016185 Pre-ATP-grasp domain superfamily BER92_RS16310 IPR013815 ATP-grasp fold, subdomain 1 BER92_RS16315 IPR010019 Integral membrane protein, YccS BER92_RS16315 IPR010020 Integral membrane protein, YccS/YhfK BER92_RS16315 IPR032692 Integral membrane protein YccS, N-terminal BER92_RS16320 IPR036259 MFS transporter superfamily BER92_RS16320 IPR020846 Major facilitator superfamily domain BER92_RS16320 IPR011701 Major facilitator superfamily BER92_RS16335 IPR023727 Lysophospholipid transporter LplT BER92_RS16335 IPR036259 MFS transporter superfamily BER92_RS16335 IPR011701 Major facilitator superfamily BER92_RS16350 IPR004485 Cobalamin biosynthesis CobD/CbiB BER92_RS16350 IPR031347 Protein AmpE BER92_RS16355 IPR015375 NADH pyrophosphatase-like, N-terminal BER92_RS16355 IPR000086 NUDIX hydrolase domain BER92_RS16355 IPR022925 NADH pyrophosphatase NudC BER92_RS16355 IPR015376 Zinc ribbon, NADH pyrophosphatase BER92_RS16355 IPR015797 NUDIX hydrolase-like domain superfamily BER92_RS16355 IPR020084 NUDIX hydrolase, conserved site BER92_RS16365 IPR002559 Transposase, IS4-like BER92_RS16365 IPR008490 Transposase InsH, N-terminal BER92_RS16375 IPR002514 Transposase IS3/IS911family BER92_RS16375 IPR009057 Homeobox-like domain superfamily BER92_RS16380 IPR025948 HTH-like domain BER92_RS16380 IPR001584 Integrase, catalytic core BER92_RS16380 IPR012337 Ribonuclease H-like superfamily BER92_RS16380 IPR036397 Ribonuclease H superfamily BER92_RS16410 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal BER92_RS16410 IPR006276 Cobalamin-independent methionine synthase BER92_RS16410 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal BER92_RS16410 IPR038071 UROD/MetE-like superfamily BER92_RS16420 IPR036291 NAD(P)-binding domain superfamily BER92_RS16420 IPR008030 NmrA-like domain BER92_RS16425 IPR002577 Helix-turn-helix, HxlR type BER92_RS16425 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS16425 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS16430 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site BER92_RS16430 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase BER92_RS16430 IPR042096 Dihydroxy-acid dehydratase, C-terminal BER92_RS16430 IPR004404 Dihydroxy-acid dehydratase BER92_RS16430 IPR037237 IlvD/EDD, N-terminal domain BER92_RS16435 IPR001451 Hexapeptide repeat BER92_RS16435 IPR011004 Trimeric LpxA-like superfamily BER92_RS16450 IPR002514 Transposase IS3/IS911family BER92_RS16450 IPR009057 Homeobox-like domain superfamily BER92_RS16455 IPR001584 Integrase, catalytic core BER92_RS16455 IPR025948 HTH-like domain BER92_RS16455 IPR012337 Ribonuclease H-like superfamily BER92_RS16455 IPR036397 Ribonuclease H superfamily BER92_RS16465 IPR008490 Transposase InsH, N-terminal BER92_RS16465 IPR002559 Transposase, IS4-like BER92_RS16470 IPR001036 Acriflavin resistance protein BER92_RS16470 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BER92_RS16470 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 BER92_RS16475 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 BER92_RS16475 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BER92_RS16475 IPR001036 Acriflavin resistance protein BER92_RS16485 IPR002912 ACT domain BER92_RS16485 IPR002376 Formyl transferase, N-terminal BER92_RS16485 IPR036477 Formyl transferase, N-terminal domain superfamily BER92_RS16485 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain BER92_RS16485 IPR004810 Formyltetrahydrofolate deformylase BER92_RS16490 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal BER92_RS16490 IPR013785 Aldolase-type TIM barrel BER92_RS16490 IPR023663 NADPH dehydrogenase BER92_RS16495 IPR029035 DHS-like NAD/FAD-binding domain superfamily BER92_RS16495 IPR003000 Sirtuin family BER92_RS16495 IPR026590 Sirtuin family, catalytic core domain BER92_RS16495 IPR026587 Sirtuin, class II BER92_RS16495 IPR026591 Sirtuin, catalytic core small domain superfamily BER92_RS16505 IPR020846 Major facilitator superfamily domain BER92_RS16505 IPR011701 Major facilitator superfamily BER92_RS16505 IPR036259 MFS transporter superfamily BER92_RS16510 IPR032466 Metal-dependent hydrolase BER92_RS16510 IPR001130 TatD family BER92_RS16510 IPR018228 Deoxyribonuclease, TatD-related, conserved site BER92_RS16510 IPR024918 3'-5' ssDNA/RNA exonuclease TatD BER92_RS16515 IPR009921 Domain of unknown function DUF1456 BER92_RS16525 IPR001650 Helicase, C-terminal BER92_RS16525 IPR014001 Helicase superfamily 1/2, ATP-binding domain BER92_RS16525 IPR007502 Helicase-associated domain BER92_RS16525 IPR011545 DEAD/DEAH box helicase domain BER92_RS16525 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal BER92_RS16525 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS16525 IPR010225 ATP-dependent helicase HrpB BER92_RS16540 IPR008490 Transposase InsH, N-terminal BER92_RS16545 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site BER92_RS16545 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F BER92_RS16545 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain BER92_RS16545 IPR020103 Pseudouridine synthase, catalytic domain superfamily BER92_RS16545 IPR006145 Pseudouridine synthase, RsuA/RluA BER92_RS16555 IPR023210 NADP-dependent oxidoreductase domain BER92_RS16555 IPR036812 NADP-dependent oxidoreductase domain superfamily BER92_RS16560 IPR013149 Alcohol dehydrogenase, C-terminal BER92_RS16560 IPR041694 Oxidoreductase, N-terminal domain BER92_RS16560 IPR020843 Polyketide synthase, enoylreductase domain BER92_RS16560 IPR036291 NAD(P)-binding domain superfamily BER92_RS16560 IPR011032 GroES-like superfamily BER92_RS16565 IPR018170 Aldo/keto reductase, conserved site BER92_RS16565 IPR036812 NADP-dependent oxidoreductase domain superfamily BER92_RS16565 IPR020471 Aldo/keto reductase BER92_RS16565 IPR023210 NADP-dependent oxidoreductase domain BER92_RS16575 IPR019953 Organic hydroperoxide resistance protein famiy BER92_RS16575 IPR003718 OsmC/Ohr family BER92_RS16575 IPR036102 OsmC/Ohr superfamily BER92_RS16575 IPR015946 K homology domain-like, alpha/beta BER92_RS16585 IPR005654 ATPase, AFG1-like BER92_RS16585 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS16585 IPR030870 Cell division protein ZapE BER92_RS16630 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal BER92_RS16630 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily BER92_RS16630 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily BER92_RS16630 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal BER92_RS16630 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal BER92_RS16630 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain BER92_RS16630 IPR006089 Acyl-CoA dehydrogenase, conserved site BER92_RS16635 IPR034733 Acetyl-CoA carboxylase BER92_RS16635 IPR029045 ClpP/crotonase-like domain superfamily BER92_RS16635 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal BER92_RS16635 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal BER92_RS16640 IPR013815 ATP-grasp fold, subdomain 1 BER92_RS16640 IPR005481 Biotin carboxylase-like, N-terminal domain BER92_RS16640 IPR001882 Biotin-binding site BER92_RS16640 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain BER92_RS16640 IPR041265 Propionyl-coenzyme A carboxylase, BT domain BER92_RS16640 IPR016185 Pre-ATP-grasp domain superfamily BER92_RS16640 IPR011054 Rudiment single hybrid motif BER92_RS16640 IPR000089 Biotin/lipoyl attachment BER92_RS16640 IPR011764 Biotin carboxylation domain BER92_RS16640 IPR005482 Biotin carboxylase, C-terminal BER92_RS16640 IPR011761 ATP-grasp fold BER92_RS16640 IPR011053 Single hybrid motif BER92_RS16650 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain BER92_RS16650 IPR002729 CRISPR-associated protein Cas1 BER92_RS16650 IPR019857 CRISPR-associated protein Cas1, YPEST subtype BER92_RS16650 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain BER92_RS16655 IPR006483 CRISPR-associated Cas3-type HD domain BER92_RS16655 IPR038257 CRISPR-associated Cas3-type HD domain superfamily BER92_RS16655 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type BER92_RS16655 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS16660 IPR013397 CRISPR-associated protein Csy1 BER92_RS16665 IPR013398 CRISPR-associated protein Csy2 BER92_RS16670 IPR013399 CRISPR-associated protein Csy3 BER92_RS16675 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST BER92_RS16680 IPR036397 Ribonuclease H superfamily BER92_RS16680 IPR001584 Integrase, catalytic core BER92_RS16680 IPR025948 HTH-like domain BER92_RS16680 IPR012337 Ribonuclease H-like superfamily BER92_RS16685 IPR001584 Integrase, catalytic core BER92_RS16685 IPR012337 Ribonuclease H-like superfamily BER92_RS16685 IPR025948 HTH-like domain BER92_RS16685 IPR036397 Ribonuclease H superfamily BER92_RS16690 IPR009057 Homeobox-like domain superfamily BER92_RS16690 IPR002514 Transposase IS3/IS911family BER92_RS16700 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BER92_RS16700 IPR001036 Acriflavin resistance protein BER92_RS16705 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BER92_RS16705 IPR006143 RND efflux pump, membrane fusion protein BER92_RS16710 IPR002891 Adenylyl-sulfate kinase BER92_RS16710 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain BER92_RS16710 IPR000795 Transcription factor, GTP-binding domain BER92_RS16710 IPR031157 Tr-type G domain, conserved site BER92_RS16710 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS16710 IPR011779 Sulphate adenylyltransferase, large subunit BER92_RS16710 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BER92_RS16710 IPR009000 Translation protein, beta-barrel domain superfamily BER92_RS16715 IPR011784 Sulphate adenylyltransferase, small subunit BER92_RS16715 IPR002500 Phosphoadenosine phosphosulphate reductase BER92_RS16715 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS16720 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding BER92_RS16720 IPR017927 FAD-binding domain, ferredoxin reductase-type BER92_RS16720 IPR001094 Flavodoxin-like BER92_RS16720 IPR008254 Flavodoxin/nitric oxide synthase BER92_RS16720 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain BER92_RS16720 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BER92_RS16720 IPR029039 Flavoprotein-like superfamily BER92_RS16720 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BER92_RS16720 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily BER92_RS16720 IPR001433 Oxidoreductase FAD/NAD(P)-binding BER92_RS16720 IPR017938 Riboflavin synthase-like beta-barrel BER92_RS16720 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria BER92_RS16725 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site BER92_RS16725 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily BER92_RS16725 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain BER92_RS16725 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit BER92_RS16725 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain BER92_RS16730 IPR011800 Phosphoadenosine phosphosulphate reductase CysH BER92_RS16730 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS16730 IPR002500 Phosphoadenosine phosphosulphate reductase BER92_RS16730 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase BER92_RS16740 IPR010101 TonB-dependent vitamin B12 transporter BtuB BER92_RS16740 IPR039426 Vitamin B12 transporter BtuB-like BER92_RS16740 IPR010917 TonB-dependent receptor, conserved site BER92_RS16740 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BER92_RS16740 IPR000531 TonB-dependent receptor-like, beta-barrel BER92_RS16740 IPR010916 TonB box, conserved site BER92_RS16740 IPR012910 TonB-dependent receptor, plug domain BER92_RS16740 IPR037066 TonB-dependent receptor, plug domain superfamily BER92_RS16750 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BER92_RS16750 IPR037952 Sensor histidine kinase TorS, sensor domain BER92_RS16750 IPR036641 HPT domain superfamily BER92_RS16750 IPR038188 TorS, sensor domain superfamily BER92_RS16750 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS16750 IPR011006 CheY-like superfamily BER92_RS16750 IPR003660 HAMP domain BER92_RS16750 IPR001789 Signal transduction response regulator, receiver domain BER92_RS16750 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS16750 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS16750 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS16750 IPR005467 Histidine kinase domain BER92_RS16750 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS16760 IPR005119 LysR, substrate-binding BER92_RS16760 IPR000847 Transcription regulator HTH, LysR BER92_RS16760 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS16760 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS16765 IPR012409 Sirohaem synthase BER92_RS16765 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site BER92_RS16765 IPR028281 Siroheme synthase, central domain BER92_RS16765 IPR019478 Sirohaem synthase, dimerisation domain BER92_RS16765 IPR000878 Tetrapyrrole methylase BER92_RS16765 IPR036291 NAD(P)-binding domain superfamily BER92_RS16765 IPR035996 Tetrapyrrole methylase superfamily BER92_RS16765 IPR014777 Tetrapyrrole methylase, subdomain 1 BER92_RS16765 IPR006367 Sirohaem synthase, N-terminal BER92_RS16765 IPR014776 Tetrapyrrole methylase, subdomain 2 BER92_RS16765 IPR006366 Uroporphyrin-III C-methyltransferase BER92_RS16770 IPR005856 Cysteine synthase BER92_RS16770 IPR005859 Cysteine synthase CysK BER92_RS16770 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site BER92_RS16770 IPR001926 Pyridoxal-phosphate dependent enzyme BER92_RS16770 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BER92_RS16775 IPR002589 Macro domain BER92_RS16780 IPR000741 Fructose-bisphosphate aldolase, class-I BER92_RS16780 IPR013785 Aldolase-type TIM barrel BER92_RS16780 IPR029768 Fructose-bisphosphate aldolase class-I active site BER92_RS16785 IPR036918 Pyruvate kinase, C-terminal domain superfamily BER92_RS16785 IPR015795 Pyruvate kinase, C-terminal BER92_RS16785 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily BER92_RS16785 IPR040442 Pyruvate kinase-like domain superfamily BER92_RS16785 IPR015806 Pyruvate kinase, insert domain superfamily BER92_RS16785 IPR011037 Pyruvate kinase-like, insert domain superfamily BER92_RS16785 IPR001697 Pyruvate kinase BER92_RS16785 IPR018209 Pyruvate kinase, active site BER92_RS16785 IPR015793 Pyruvate kinase, barrel BER92_RS16790 IPR041492 Haloacid dehalogenase-like hydrolase BER92_RS16790 IPR006439 HAD hydrolase, subfamily IA BER92_RS16790 IPR036412 HAD-like superfamily BER92_RS16790 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BER92_RS16790 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic BER92_RS16790 IPR037512 Phosphoglycolate phosphatase, prokaryotic BER92_RS16790 IPR023214 HAD superfamily BER92_RS16795 IPR001576 Phosphoglycerate kinase BER92_RS16795 IPR015824 Phosphoglycerate kinase, N-terminal BER92_RS16795 IPR015911 Phosphoglycerate kinase, conserved site BER92_RS16795 IPR036043 Phosphoglycerate kinase superfamily BER92_RS16820 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS16820 IPR003660 HAMP domain BER92_RS16820 IPR032404 Two-component sensor protein CpxA, periplasmic domain BER92_RS16820 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS16820 IPR038515 CpxA, periplasmic domain superfamily BER92_RS16820 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS16820 IPR005467 Histidine kinase domain BER92_RS16820 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS16820 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS16825 IPR000192 Aminotransferase class V domain BER92_RS16825 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BER92_RS16825 IPR010240 Cysteine desulfurase IscS BER92_RS16825 IPR016454 Cysteine desulfurase BER92_RS16825 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS16825 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BER92_RS16825 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS16860 IPR002514 Transposase IS3/IS911family BER92_RS16860 IPR009057 Homeobox-like domain superfamily BER92_RS16865 IPR036397 Ribonuclease H superfamily BER92_RS16865 IPR012337 Ribonuclease H-like superfamily BER92_RS16865 IPR001584 Integrase, catalytic core BER92_RS16865 IPR025948 HTH-like domain BER92_RS16875 IPR002559 Transposase, IS4-like BER92_RS16875 IPR008490 Transposase InsH, N-terminal BER92_RS16890 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site BER92_RS16890 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family BER92_RS16890 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain BER92_RS16890 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain BER92_RS16890 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I BER92_RS16890 IPR036291 NAD(P)-binding domain superfamily BER92_RS16905 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BER92_RS16905 IPR029021 Protein-tyrosine phosphatase-like BER92_RS16905 IPR001279 Metallo-beta-lactamase BER92_RS16905 IPR005939 Beta-lactamase hydrolase-like BER92_RS16910 IPR005950 Molybdate ABC transporter, substrate-binding protein BER92_RS16915 IPR011867 Molybdate ABC transporter, permease protein BER92_RS16915 IPR035906 MetI-like superfamily BER92_RS16915 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BER92_RS16920 IPR005116 Transport-associated OB, type 1 BER92_RS16920 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS16920 IPR011868 Molybdate ABC transporter, ATP-binding protein BER92_RS16920 IPR008995 Molybdate/tungstate binding, C-terminal BER92_RS16920 IPR004606 Molybdenum-pterin binding BER92_RS16920 IPR003439 ABC transporter-like BER92_RS16920 IPR017871 ABC transporter, conserved site BER92_RS16920 IPR015852 ABC transporter, molybdenum import, ModC BER92_RS16920 IPR003593 AAA+ ATPase domain BER92_RS16935 IPR014071 Copper transport repressor CopY/TcrY BER92_RS16935 IPR005650 BlaI transcriptional regulatory family BER92_RS16935 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS16935 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS16945 IPR018392 LysM domain BER92_RS16945 IPR036779 LysM domain superfamily BER92_RS16945 IPR038063 L,D-transpeptidase catalytic domain-like BER92_RS16945 IPR005490 L,D-transpeptidase catalytic domain BER92_RS16950 IPR000189 Prokaryotic transglycosylase, active site BER92_RS16950 IPR016047 Peptidase M23 BER92_RS16950 IPR010090 Phage tail tape measure protein BER92_RS16950 IPR011055 Duplicated hybrid motif BER92_RS16950 IPR008258 Transglycosylase SLT domain 1 BER92_RS16950 IPR023346 Lysozyme-like domain superfamily BER92_RS16955 IPR000531 TonB-dependent receptor-like, beta-barrel BER92_RS16955 IPR010916 TonB box, conserved site BER92_RS16955 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BER92_RS16955 IPR037066 TonB-dependent receptor, plug domain superfamily BER92_RS16955 IPR010917 TonB-dependent receptor, conserved site BER92_RS16955 IPR012910 TonB-dependent receptor, plug domain BER92_RS16955 IPR010105 TonB-dependent siderophore receptor BER92_RS16955 IPR039423 TonB-dependent receptor-like BER92_RS16960 IPR005478 Transketolase, bacterial-like BER92_RS16960 IPR033247 Transketolase family BER92_RS16960 IPR005474 Transketolase, N-terminal BER92_RS16960 IPR033248 Transketolase, C-terminal domain BER92_RS16960 IPR020826 Transketolase binding site BER92_RS16960 IPR005475 Transketolase-like, pyrimidine-binding domain BER92_RS16960 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BER92_RS16960 IPR029061 Thiamin diphosphate-binding fold BER92_RS16965 IPR033380 Glutamate-aspartate symport protein GltP/GltT BER92_RS16965 IPR034703 Proton/glutamate-aspartate symporter GltP BER92_RS16965 IPR036458 Sodium:dicarboxylate symporter superfamily BER92_RS16965 IPR001991 Sodium:dicarboxylate symporter BER92_RS16965 IPR018107 Sodium:dicarboxylate symporter, conserved site BER92_RS16975 IPR022933 Uncharacterised protein family UPF0353 BER92_RS16975 IPR002035 von Willebrand factor, type A BER92_RS16975 IPR036465 von Willebrand factor A-like domain superfamily BER92_RS16995 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS16995 IPR041628 ChlI/MoxR, AAA lid domain BER92_RS16995 IPR011703 ATPase, AAA-3 BER92_RS17020 IPR008490 Transposase InsH, N-terminal BER92_RS17020 IPR002559 Transposase, IS4-like BER92_RS17035 IPR038770 Sodium/solute symporter superfamily BER92_RS17035 IPR018422 Cation/H+ exchanger, CPA1 family BER92_RS17035 IPR006153 Cation/H+ exchanger BER92_RS17035 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria BER92_RS17055 IPR002559 Transposase, IS4-like BER92_RS17060 IPR036378 FAS1 domain superfamily BER92_RS17060 IPR000782 FAS1 domain BER92_RS17065 IPR005273 Uracil-DNA glycosylase family 4 BER92_RS17065 IPR005122 Uracil-DNA glycosylase-like BER92_RS17065 IPR036895 Uracil-DNA glycosylase-like domain superfamily BER92_RS17075 IPR018170 Aldo/keto reductase, conserved site BER92_RS17075 IPR020471 Aldo/keto reductase BER92_RS17075 IPR023210 NADP-dependent oxidoreductase domain BER92_RS17075 IPR036812 NADP-dependent oxidoreductase domain superfamily BER92_RS17085 IPR000718 Peptidase M13 BER92_RS17085 IPR024079 Metallopeptidase, catalytic domain superfamily BER92_RS17085 IPR008753 Peptidase M13, N-terminal domain BER92_RS17085 IPR018497 Peptidase M13, C-terminal domain BER92_RS17085 IPR042089 Peptidase M13, domain 2 BER92_RS17100 IPR002293 Amino acid/polyamine transporter I BER92_RS17115 IPR009078 Ferritin-like superfamily BER92_RS17115 IPR010287 Domain of unknown function DUF892 BER92_RS17115 IPR012347 Ferritin-like BER92_RS17120 IPR007760 Manganese catalase BER92_RS17120 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain BER92_RS17120 IPR027407 Manganese catalase, C-terminal BER92_RS17120 IPR012347 Ferritin-like BER92_RS17120 IPR009078 Ferritin-like superfamily BER92_RS17135 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BER92_RS17135 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase BER92_RS17135 IPR000014 PAS domain BER92_RS17135 IPR013656 PAS fold-4 BER92_RS17135 IPR035965 PAS domain superfamily BER92_RS17135 IPR000780 MCP methyltransferase, CheR-type BER92_RS17135 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BER92_RS17135 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS17135 IPR035909 Methylesterase CheB, C-terminal BER92_RS17150 IPR003593 AAA+ ATPase domain BER92_RS17150 IPR009057 Homeobox-like domain superfamily BER92_RS17150 IPR002197 DNA binding HTH domain, Fis-type BER92_RS17150 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS17150 IPR002078 RNA polymerase sigma factor 54 interaction domain BER92_RS17150 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BER92_RS17150 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BER92_RS17150 IPR025944 Sigma-54 interaction domain, conserved site BER92_RS17150 IPR010114 DNA-binding transcriptional regulator NtrC BER92_RS17150 IPR011006 CheY-like superfamily BER92_RS17150 IPR001789 Signal transduction response regulator, receiver domain BER92_RS17175 IPR036291 NAD(P)-binding domain superfamily BER92_RS17175 IPR020904 Short-chain dehydrogenase/reductase, conserved site BER92_RS17175 IPR002347 Short-chain dehydrogenase/reductase SDR BER92_RS17180 IPR016040 NAD(P)-binding domain BER92_RS17180 IPR036291 NAD(P)-binding domain superfamily BER92_RS17180 IPR005886 UDP-glucose 4-epimerase BER92_RS17190 IPR015899 UDP-galactopyranose mutase, C-terminal BER92_RS17190 IPR004379 UDP-galactopyranose mutase BER92_RS17200 IPR003593 AAA+ ATPase domain BER92_RS17200 IPR036640 ABC transporter type 1, transmembrane domain superfamily BER92_RS17200 IPR003439 ABC transporter-like BER92_RS17200 IPR039421 Type I protein exporter BER92_RS17200 IPR017871 ABC transporter, conserved site BER92_RS17200 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS17200 IPR011527 ABC transporter type 1, transmembrane domain BER92_RS17215 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BER92_RS17215 IPR011032 GroES-like superfamily BER92_RS17215 IPR036291 NAD(P)-binding domain superfamily BER92_RS17215 IPR013149 Alcohol dehydrogenase, C-terminal BER92_RS17215 IPR013154 Alcohol dehydrogenase, N-terminal BER92_RS17215 IPR027399 Alcohol dehydrogenase GroES-associated BER92_RS17255 IPR010105 TonB-dependent siderophore receptor BER92_RS17255 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily BER92_RS17255 IPR000531 TonB-dependent receptor-like, beta-barrel BER92_RS17255 IPR012910 TonB-dependent receptor, plug domain BER92_RS17255 IPR037066 TonB-dependent receptor, plug domain superfamily BER92_RS17255 IPR039423 TonB-dependent receptor-like BER92_RS17270 IPR017871 ABC transporter, conserved site BER92_RS17270 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS17270 IPR003593 AAA+ ATPase domain BER92_RS17270 IPR022501 Gallidermin ABC transporter, ATP-binding subunit BER92_RS17270 IPR003439 ABC transporter-like BER92_RS17300 IPR011547 SLC26A/SulP transporter domain BER92_RS17300 IPR018045 Sulphate anion transporter, conserved site BER92_RS17300 IPR036513 STAS domain superfamily BER92_RS17300 IPR002645 STAS domain BER92_RS17300 IPR001902 SLC26A/SulP transporter BER92_RS17325 IPR009057 Homeobox-like domain superfamily BER92_RS17325 IPR002514 Transposase IS3/IS911family BER92_RS17345 IPR029061 Thiamin diphosphate-binding fold BER92_RS17345 IPR005474 Transketolase, N-terminal BER92_RS17345 IPR004660 Pyruvate dehydrogenase E1 component BER92_RS17345 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II BER92_RS17345 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal BER92_RS17345 IPR041621 Pyruvate dehydrogenase E1 component, middle domain BER92_RS17390 IPR016039 Thiolase-like BER92_RS17390 IPR020806 Polyketide synthase, phosphopantetheine-binding domain BER92_RS17390 IPR013968 Polyketide synthase, ketoreductase domain BER92_RS17390 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BER92_RS17390 IPR032821 Ketoacyl-synthetase, C-terminal extension BER92_RS17390 IPR036736 ACP-like superfamily BER92_RS17390 IPR036291 NAD(P)-binding domain superfamily BER92_RS17390 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BER92_RS17390 IPR014043 Acyl transferase BER92_RS17390 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BER92_RS17390 IPR018201 Beta-ketoacyl synthase, active site BER92_RS17390 IPR009081 Phosphopantetheine binding ACP domain BER92_RS17390 IPR014030 Beta-ketoacyl synthase, N-terminal BER92_RS17390 IPR014031 Beta-ketoacyl synthase, C-terminal BER92_RS17395 IPR002736 Triphosphoribosyl-dephospho-CoA protein BER92_RS17395 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG BER92_RS17400 IPR017557 Phosphoribosyl-dephospho-CoA transferase BER92_RS17410 IPR029045 ClpP/crotonase-like domain superfamily BER92_RS17410 IPR034733 Acetyl-CoA carboxylase BER92_RS17410 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal BER92_RS17410 IPR017556 Biotin-independent malonate decarboxylase, beta subunit BER92_RS17415 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein BER92_RS17415 IPR009662 Malonate decarboxylase delta subunit BER92_RS17430 IPR002559 Transposase, IS4-like BER92_RS17430 IPR012337 Ribonuclease H-like superfamily BER92_RS17430 IPR024473 Transposase, IS4, N-terminal BER92_RS17435 IPR023480 Uncharacterised protein family UPF0312/YceI BER92_RS17435 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily BER92_RS17435 IPR007372 Lipid/polyisoprenoid-binding, YceI-like BER92_RS17440 IPR029479 Nitroreductase BER92_RS17440 IPR000415 Nitroreductase-like BER92_RS17440 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE BER92_RS17450 IPR003744 Queuosine precursor transporter BER92_RS17455 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase BER92_RS17455 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain BER92_RS17455 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme BER92_RS17465 IPR005511 Senescence marker protein-30 (SMP-30) BER92_RS17465 IPR006311 Twin-arginine translocation pathway, signal sequence BER92_RS17465 IPR011042 Six-bladed beta-propeller, TolB-like BER92_RS17465 IPR013658 SMP-30/Gluconolactonase/LRE-like region BER92_RS17475 IPR037171 NagB/RpiA transferase-like BER92_RS17475 IPR017821 Succinate CoA transferase BER92_RS17475 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain BER92_RS17475 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily BER92_RS17475 IPR003702 Acetyl-CoA hydrolase/transferase BER92_RS17485 IPR013785 Aldolase-type TIM barrel BER92_RS17485 IPR006219 DHAP synthase, class 1 BER92_RS17485 IPR006218 DAHP synthetase I/KDSA BER92_RS17500 IPR012337 Ribonuclease H-like superfamily BER92_RS17500 IPR002559 Transposase, IS4-like BER92_RS17500 IPR024473 Transposase, IS4, N-terminal BER92_RS17505 IPR027413 GroEL-like equatorial domain superfamily BER92_RS17505 IPR027409 GroEL-like apical domain superfamily BER92_RS17505 IPR018370 Chaperonin Cpn60, conserved site BER92_RS17505 IPR002423 Chaperonin Cpn60/TCP-1 family BER92_RS17505 IPR001844 Chaperonin Cpn60 BER92_RS17505 IPR027410 TCP-1-like chaperonin intermediate domain superfamily BER92_RS17510 IPR020818 GroES chaperonin family BER92_RS17510 IPR037124 GroES chaperonin superfamily BER92_RS17510 IPR018369 Chaperonin GroES, conserved site BER92_RS17510 IPR011032 GroES-like superfamily BER92_RS17525 IPR004323 Divalent ion tolerance protein, CutA BER92_RS17525 IPR011322 Nitrogen regulatory PII-like, alpha/beta BER92_RS17525 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BER92_RS17525 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria BER92_RS17530 IPR017937 Thioredoxin, conserved site BER92_RS17530 IPR003834 Cytochrome C biogenesis protein, transmembrane domain BER92_RS17530 IPR035671 DsbD gamma BER92_RS17530 IPR013766 Thioredoxin domain BER92_RS17530 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain BER92_RS17530 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily BER92_RS17530 IPR022910 Thiol:disulphide interchange protein DsbD BER92_RS17530 IPR036249 Thioredoxin-like superfamily BER92_RS17545 IPR008490 Transposase InsH, N-terminal BER92_RS17560 IPR012337 Ribonuclease H-like superfamily BER92_RS17560 IPR001584 Integrase, catalytic core BER92_RS17560 IPR025948 HTH-like domain BER92_RS17560 IPR036397 Ribonuclease H superfamily BER92_RS17565 IPR009057 Homeobox-like domain superfamily BER92_RS17565 IPR002514 Transposase IS3/IS911family BER92_RS17570 IPR036291 NAD(P)-binding domain superfamily BER92_RS17570 IPR000534 Semialdehyde dehydrogenase, NAD-binding BER92_RS17570 IPR016040 NAD(P)-binding domain BER92_RS17575 IPR013783 Immunoglobulin-like fold BER92_RS17575 IPR017853 Glycoside hydrolase superfamily BER92_RS17575 IPR011837 Glycogen debranching enzyme, GlgX type BER92_RS17575 IPR013780 Glycosyl hydrolase, all-beta BER92_RS17575 IPR004193 Glycoside hydrolase, family 13, N-terminal BER92_RS17575 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BER92_RS17575 IPR014756 Immunoglobulin E-set BER92_RS17585 IPR012767 Maltooligosyl trehalose synthase BER92_RS17585 IPR017853 Glycoside hydrolase superfamily BER92_RS17585 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BER92_RS17590 IPR017853 Glycoside hydrolase superfamily BER92_RS17590 IPR003385 Glycoside hydrolase, family 77 BER92_RS17595 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) BER92_RS17595 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BER92_RS17595 IPR013780 Glycosyl hydrolase, all-beta BER92_RS17595 IPR017853 Glycoside hydrolase superfamily BER92_RS17595 IPR013783 Immunoglobulin-like fold BER92_RS17595 IPR014756 Immunoglobulin E-set BER92_RS17595 IPR012768 Malto-oligosyltrehalose trehalohydrolase BER92_RS17595 IPR004193 Glycoside hydrolase, family 13, N-terminal BER92_RS17600 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta BER92_RS17600 IPR037439 1,4-alpha-glucan-branching enzyme BER92_RS17600 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB BER92_RS17600 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BER92_RS17600 IPR004193 Glycoside hydrolase, family 13, N-terminal BER92_RS17600 IPR013780 Glycosyl hydrolase, all-beta BER92_RS17600 IPR017853 Glycoside hydrolase superfamily BER92_RS17600 IPR013783 Immunoglobulin-like fold BER92_RS17600 IPR014756 Immunoglobulin E-set BER92_RS17605 IPR001296 Glycosyl transferase, family 1 BER92_RS17605 IPR013534 Starch synthase, catalytic domain BER92_RS17605 IPR011835 Bacterial/plant glycogen synthase BER92_RS17610 IPR000160 GGDEF domain BER92_RS17610 IPR029787 Nucleotide cyclase BER92_RS17615 IPR013785 Aldolase-type TIM barrel BER92_RS17615 IPR017853 Glycoside hydrolase superfamily BER92_RS17615 IPR003790 Glycosyl hydrolase-like 10 BER92_RS17620 IPR008526 Inner membrane protein YedI BER92_RS17625 IPR004147 UbiB domain BER92_RS17625 IPR000719 Protein kinase domain BER92_RS17625 IPR011009 Protein kinase-like domain superfamily BER92_RS17630 IPR024393 Mechanosensitive ion channel MscS, porin domain BER92_RS17630 IPR025692 Mechanosensitive ion channel inner membrane domain 1 BER92_RS17630 IPR023408 Mechanosensitive ion channel MscS domain superfamily BER92_RS17630 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 BER92_RS17630 IPR010920 LSM domain superfamily BER92_RS17630 IPR006686 Mechanosensitive ion channel MscS, conserved site BER92_RS17630 IPR006685 Mechanosensitive ion channel MscS BER92_RS17630 IPR011066 Mechanosensitive ion channel MscS, C-terminal BER92_RS17645 IPR006370 4-hydroxybenzoate polyprenyltransferase-like BER92_RS17645 IPR000537 UbiA prenyltransferase family BER92_RS17645 IPR030470 UbiA prenyltransferase conserved site BER92_RS17645 IPR039653 Prenyltransferase BER92_RS17650 IPR029057 Phosphoribosyltransferase-like BER92_RS17650 IPR000836 Phosphoribosyltransferase domain BER92_RS17650 IPR005222 Competence protein ComF BER92_RS17655 IPR010722 Biotin and thiamin synthesis-associated domain BER92_RS17655 IPR013785 Aldolase-type TIM barrel BER92_RS17655 IPR007197 Radical SAM BER92_RS17655 IPR006638 Elp3/MiaB/NifB BER92_RS17655 IPR024177 Biotin synthase BER92_RS17655 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB BER92_RS17660 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BER92_RS17660 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS17660 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type BER92_RS17660 IPR004839 Aminotransferase, class I/classII BER92_RS17660 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS17660 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria BER92_RS17670 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase BER92_RS17670 IPR029058 Alpha/Beta hydrolase fold BER92_RS17670 IPR000073 Alpha/beta hydrolase fold-1 BER92_RS17675 IPR020904 Short-chain dehydrogenase/reductase, conserved site BER92_RS17675 IPR002347 Short-chain dehydrogenase/reductase SDR BER92_RS17675 IPR036291 NAD(P)-binding domain superfamily BER92_RS17685 IPR041698 Methyltransferase domain 25 BER92_RS17685 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS17685 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC BER92_RS17705 IPR001926 Pyridoxal-phosphate dependent enzyme BER92_RS17705 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BER92_RS17715 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG BER92_RS17715 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related BER92_RS17715 IPR020595 MnmG-related, conserved site BER92_RS17715 IPR026904 GidA associated domain 3 BER92_RS17715 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS17740 IPR001034 DeoR-type HTH domain BER92_RS17740 IPR037171 NagB/RpiA transferase-like BER92_RS17740 IPR018356 Transcription regulator, HTH DeoR-type, conserved site BER92_RS17740 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS17740 IPR014036 DeoR C-terminal sensor domain BER92_RS17740 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS17745 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase BER92_RS17745 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS17745 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily BER92_RS17745 IPR006076 FAD dependent oxidoreductase BER92_RS17745 IPR031656 Alpha-glycerophosphate oxidase, C-terminal BER92_RS17750 IPR023271 Aquaporin-like BER92_RS17750 IPR022357 Major intrinsic protein, conserved site BER92_RS17750 IPR000425 Major intrinsic protein BER92_RS17755 IPR000577 Carbohydrate kinase, FGGY BER92_RS17755 IPR018483 Carbohydrate kinase, FGGY, conserved site BER92_RS17755 IPR005999 Glycerol kinase BER92_RS17755 IPR018484 Carbohydrate kinase, FGGY, N-terminal BER92_RS17755 IPR018485 Carbohydrate kinase, FGGY, C-terminal BER92_RS17765 IPR002514 Transposase IS3/IS911family BER92_RS17765 IPR009057 Homeobox-like domain superfamily BER92_RS17780 IPR001567 Peptidase M3A/M3B catalytic domain BER92_RS17780 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 BER92_RS17795 IPR000352 Peptide chain release factor class I BER92_RS17825 IPR011009 Protein kinase-like domain superfamily BER92_RS17825 IPR010232 Probable protein kinase UbiB BER92_RS17825 IPR004147 UbiB domain BER92_RS17845 IPR036291 NAD(P)-binding domain superfamily BER92_RS17845 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase BER92_RS17850 IPR042099 AMP-dependent synthetase-like superfamily BER92_RS17850 IPR020845 AMP-binding, conserved site BER92_RS17850 IPR000873 AMP-dependent synthetase/ligase BER92_RS17855 IPR005358 Putative zinc- or iron-chelating domain containing protein BER92_RS17860 IPR000073 Alpha/beta hydrolase fold-1 BER92_RS17860 IPR000639 Epoxide hydrolase-like BER92_RS17860 IPR029058 Alpha/Beta hydrolase fold BER92_RS17880 IPR035903 HesB-like domain superfamily BER92_RS17880 IPR017870 FeS cluster insertion, C-terminal, conserved site BER92_RS17880 IPR000361 FeS cluster biogenesis BER92_RS17880 IPR016092 FeS cluster insertion protein BER92_RS17880 IPR023063 FeS cluster insertion protein ErpA BER92_RS17900 IPR029787 Nucleotide cyclase BER92_RS17900 IPR005330 MHYT domain BER92_RS17900 IPR000160 GGDEF domain BER92_RS17900 IPR001633 EAL domain BER92_RS17900 IPR035919 EAL domain superfamily BER92_RS17905 IPR005467 Histidine kinase domain BER92_RS17905 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS17905 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS17905 IPR019247 Histidine kinase BarA, N-terminal BER92_RS17905 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS17905 IPR003660 HAMP domain BER92_RS17905 IPR036641 HPT domain superfamily BER92_RS17905 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS17905 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS17905 IPR011006 CheY-like superfamily BER92_RS17905 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain BER92_RS17905 IPR001789 Signal transduction response regulator, receiver domain BER92_RS17910 IPR008331 Ferritin/DPS protein domain BER92_RS17910 IPR009078 Ferritin-like superfamily BER92_RS17910 IPR009040 Ferritin-like diiron domain BER92_RS17910 IPR012347 Ferritin-like BER92_RS17910 IPR002024 Bacterioferritin BER92_RS17920 IPR015797 NUDIX hydrolase-like domain superfamily BER92_RS17920 IPR020084 NUDIX hydrolase, conserved site BER92_RS17920 IPR000086 NUDIX hydrolase domain BER92_RS17920 IPR022927 RNA pyrophosphohydrolase RppH BER92_RS17935 IPR020568 Ribosomal protein S5 domain 2-type fold BER92_RS17935 IPR020574 Ribosomal protein S9, conserved site BER92_RS17935 IPR023035 Ribosomal protein S9, bacterial/plastid BER92_RS17935 IPR000754 Ribosomal protein S9 BER92_RS17935 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BER92_RS17940 IPR036899 Ribosomal protein L13 superfamily BER92_RS17940 IPR023563 Ribosomal protein L13, conserved site BER92_RS17940 IPR005823 Ribosomal protein L13, bacterial-type BER92_RS17940 IPR005822 Ribosomal protein L13 BER92_RS17945 IPR011566 Ubiquinone biosynthesis protein Coq7 BER92_RS17945 IPR012347 Ferritin-like BER92_RS17945 IPR009078 Ferritin-like superfamily BER92_RS17950 IPR000390 Small multidrug resistance protein family BER92_RS17955 IPR009165 S-adenosylmethionine decarboxylase, bacterial BER92_RS17955 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic BER92_RS17955 IPR016067 S-adenosylmethionine decarboxylase, core BER92_RS17960 IPR000595 Cyclic nucleotide-binding domain BER92_RS17960 IPR018490 Cyclic nucleotide-binding-like BER92_RS17960 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS17960 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS17960 IPR018335 Transcription regulator HTH, Crp-type, conserved site BER92_RS17960 IPR012318 Crp-type HTH domain BER92_RS17960 IPR014710 RmlC-like jelly roll fold BER92_RS17970 IPR013798 Indole-3-glycerol phosphate synthase BER92_RS17970 IPR013785 Aldolase-type TIM barrel BER92_RS17970 IPR001468 Indole-3-glycerol phosphate synthase, conserved site BER92_RS17970 IPR011060 Ribulose-phosphate binding barrel BER92_RS17975 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily BER92_RS17975 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily BER92_RS17975 IPR017459 Glycosyl transferase family 3, N-terminal domain BER92_RS17975 IPR000312 Glycosyl transferase, family 3 BER92_RS17975 IPR005940 Anthranilate phosphoribosyl transferase BER92_RS17985 IPR029062 Class I glutamine amidotransferase-like BER92_RS17985 IPR017926 Glutamine amidotransferase BER92_RS17985 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain BER92_RS18005 IPR000192 Aminotransferase class V domain BER92_RS18005 IPR012703 2-aminoethylphosphonate--pyruvate transaminase BER92_RS18005 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS18005 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BER92_RS18005 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS18005 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase BER92_RS18010 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme BER92_RS18010 IPR015421 Pyridoxal phosphate-dependent transferase, major domain BER92_RS18010 IPR015424 Pyridoxal phosphate-dependent transferase BER92_RS18010 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 BER92_RS18010 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase BER92_RS18030 IPR029062 Class I glutamine amidotransferase-like BER92_RS18030 IPR005697 Homoserine O-succinyltransferase MetA BER92_RS18030 IPR033752 MetA family BER92_RS18035 IPR008146 Glutamine synthetase, catalytic domain BER92_RS18035 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BER92_RS18035 IPR036651 Glutamine synthetase, N-terminal domain superfamily BER92_RS18040 IPR006805 Anthranilate synthase component I, N-terminal BER92_RS18040 IPR005801 ADC synthase BER92_RS18040 IPR019999 Anthranilate synthase component I-like BER92_RS18040 IPR005256 Anthranilate synthase component I, PabB-like BER92_RS18040 IPR015890 Chorismate-utilising enzyme, C-terminal BER92_RS18045 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal BER92_RS18045 IPR005218 Diacylglycerol/lipid kinase BER92_RS18045 IPR001206 Diacylglycerol kinase, catalytic domain BER92_RS18045 IPR022433 Lipid kinase YegS BER92_RS18045 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BER92_RS18050 IPR016181 Acyl-CoA N-acyltransferase BER92_RS18050 IPR000182 GNAT domain BER92_RS18055 IPR000056 Ribulose-phosphate 3-epimerase-like BER92_RS18055 IPR026019 Ribulose-phosphate 3-epimerase BER92_RS18055 IPR013785 Aldolase-type TIM barrel BER92_RS18055 IPR011060 Ribulose-phosphate binding barrel BER92_RS18065 IPR007791 Co-chaperone DjlA, N-terminal BER92_RS18065 IPR029024 TerB-like BER92_RS18065 IPR036869 Chaperone J-domain superfamily BER92_RS18065 IPR001623 DnaJ domain BER92_RS18065 IPR023749 Co-chaperone DjlA BER92_RS18070 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase BER92_RS18070 IPR018236 SAICAR synthetase, conserved site BER92_RS18070 IPR028923 SAICAR synthetase/ADE2, N-terminal BER92_RS18105 IPR025383 Domain of unknown function DUF4040 BER92_RS18105 IPR007182 Na+/H+ antiporter MnhB subunit-related protein BER92_RS18105 IPR005663 Monovalent cation proton antiporter subunit A BER92_RS18105 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BER92_RS18105 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal BER92_RS18105 IPR005281 Monovalent cation:proton antiporter, subunit B BER92_RS18110 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like BER92_RS18110 IPR006673 Mnh complex subunit C1 BER92_RS18115 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit BER92_RS18115 IPR004775 Na(+)/H(+) antiporter subunit D1 BER92_RS18125 IPR007208 Na(+)/H(+) antiporter subunit F-like BER92_RS18130 IPR005133 Na+/H+ antiporter subunit G BER92_RS18135 IPR002559 Transposase, IS4-like BER92_RS18135 IPR008490 Transposase InsH, N-terminal BER92_RS18165 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily BER92_RS18165 IPR000755 D-alanyl-D-alanine dipeptidase BER92_RS18170 IPR036366 PGBD superfamily BER92_RS18170 IPR036365 PGBD-like superfamily BER92_RS18170 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily BER92_RS18170 IPR002502 N-acetylmuramoyl-L-alanine amidase domain BER92_RS18180 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site BER92_RS18180 IPR029017 Enolase-like, N-terminal BER92_RS18180 IPR036849 Enolase-like, C-terminal domain superfamily BER92_RS18180 IPR034603 Dipeptide epimerase BER92_RS18180 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BER92_RS18180 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BER92_RS18180 IPR029065 Enolase C-terminal domain-like BER92_RS18190 IPR002293 Amino acid/polyamine transporter I BER92_RS18190 IPR004754 Amino acid antiporter BER92_RS18210 IPR012938 Glucose/Sorbosone dehydrogenase BER92_RS18210 IPR011042 Six-bladed beta-propeller, TolB-like BER92_RS18210 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase BER92_RS18215 IPR026891 Fibronectin type III-like domain BER92_RS18215 IPR019800 Glycoside hydrolase, family 3, active site BER92_RS18215 IPR013783 Immunoglobulin-like fold BER92_RS18215 IPR017853 Glycoside hydrolase superfamily BER92_RS18215 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily BER92_RS18215 IPR001764 Glycoside hydrolase, family 3, N-terminal BER92_RS18215 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily BER92_RS18215 IPR002772 Glycoside hydrolase family 3 C-terminal domain BER92_RS18220 IPR006157 Dihydroneopterin aldolase/epimerase domain BER92_RS18220 IPR006156 Dihydroneopterin aldolase BER92_RS18225 IPR017861 Kae1/TsaD family BER92_RS18225 IPR017860 Peptidase M22, conserved site BER92_RS18225 IPR000905 Gcp-like domain BER92_RS18225 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD BER92_RS18230 IPR018278 Ribosomal protein S21, conserved site BER92_RS18230 IPR001911 Ribosomal protein S21 BER92_RS18230 IPR038380 Ribosomal protein S21 superfamily BER92_RS18240 IPR023679 Uncharacterised protein family UPF0761, bacterial BER92_RS18240 IPR017039 Virulence factor BrkB BER92_RS18245 IPR002694 Zinc finger, CHC2-type BER92_RS18245 IPR006171 TOPRIM domain BER92_RS18245 IPR030846 DNA primase DnaG, bacteria BER92_RS18245 IPR036977 DNA Primase, CHC2-type zinc finger BER92_RS18245 IPR013173 DNA primase DnaG, DnaB-binding domain BER92_RS18245 IPR006295 DNA primase, DnaG BER92_RS18245 IPR019475 DNA primase, DnaB-helicase binding domain BER92_RS18245 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily BER92_RS18245 IPR013264 DNA primase, catalytic core, N-terminal BER92_RS18245 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BER92_RS18245 IPR034151 Bacterial DnaG primase, TOPRIM domain BER92_RS18250 IPR016833 Putative sodium bile acid cotransporter BER92_RS18250 IPR038770 Sodium/solute symporter superfamily BER92_RS18260 IPR006369 Protohaem IX farnesyltransferase BER92_RS18260 IPR000537 UbiA prenyltransferase family BER92_RS18260 IPR030470 UbiA prenyltransferase conserved site BER92_RS18285 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle BER92_RS18285 IPR035973 Cytochrome c oxidase subunit III-like superfamily BER92_RS18285 IPR000298 Cytochrome c oxidase subunit III-like BER92_RS18285 IPR033945 Cytochrome c oxidase subunit III domain BER92_RS18285 IPR024791 Cytochrome c oxidase subunit III BER92_RS18290 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily BER92_RS18290 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 BER92_RS18295 IPR014241 Cytochrome c oxidase, subunit I bacterial type BER92_RS18295 IPR033944 Cytochrome c oxidase subunit I domain BER92_RS18295 IPR023616 Cytochrome c oxidase-like, subunit I domain BER92_RS18295 IPR036927 Cytochrome c oxidase-like, subunit I superfamily BER92_RS18295 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site BER92_RS18295 IPR000883 Cytochrome c oxidase subunit I BER92_RS18300 IPR034210 Cytochrome c oxidase subunit 2, C-terminal BER92_RS18300 IPR001505 Copper centre Cu(A) BER92_RS18300 IPR002429 Cytochrome c oxidase subunit II-like C-terminal BER92_RS18300 IPR008972 Cupredoxin BER92_RS18300 IPR014222 Cytochrome c oxidase, subunit II BER92_RS18300 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain BER92_RS18300 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily BER92_RS18300 IPR005728 Rickettsial palindromic element BER92_RS18315 IPR025703 Bifunctional protein PutA BER92_RS18315 IPR002872 Proline dehydrogenase domain BER92_RS18315 IPR024082 Proline dehydrogenase PutA, domain II BER92_RS18315 IPR010985 Ribbon-helix-helix BER92_RS18315 IPR024090 Proline dehydrogenase PutA, domain I BER92_RS18315 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain BER92_RS18315 IPR029041 FAD-linked oxidoreductase-like BER92_RS18315 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 BER92_RS18315 IPR013321 Arc-type ribbon-helix-helix BER92_RS18315 IPR015590 Aldehyde dehydrogenase domain BER92_RS18315 IPR016162 Aldehyde dehydrogenase, N-terminal BER92_RS18315 IPR024089 Proline dehydrogenase PutA, domain I/II BER92_RS18315 IPR016161 Aldehyde/histidinol dehydrogenase BER92_RS18315 IPR016163 Aldehyde dehydrogenase, C-terminal BER92_RS18315 IPR016160 Aldehyde dehydrogenase, cysteine active site BER92_RS18315 IPR029510 Aldehyde dehydrogenase, glutamic acid active site BER92_RS18320 IPR002307 Tyrosine-tRNA ligase BER92_RS18320 IPR036986 RNA-binding S4 domain superfamily BER92_RS18320 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 BER92_RS18320 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS18320 IPR002305 Aminoacyl-tRNA synthetase, class Ic BER92_RS18320 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BER92_RS18320 IPR002942 RNA-binding S4 domain BER92_RS18320 IPR024088 Tyrosine-tRNA ligase, bacterial-type BER92_RS18325 IPR007340 Opacity-associated protein A BER92_RS18325 IPR011055 Duplicated hybrid motif BER92_RS18325 IPR016047 Peptidase M23 BER92_RS18330 IPR005338 Anhydro-N-acetylmuramic acid kinase BER92_RS18340 IPR036259 MFS transporter superfamily BER92_RS18340 IPR020846 Major facilitator superfamily domain BER92_RS18340 IPR011701 Major facilitator superfamily BER92_RS18340 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 BER92_RS18350 IPR020847 AP endonuclease 1, binding site BER92_RS18350 IPR004808 AP endonuclease 1 BER92_RS18350 IPR020848 AP endonuclease 1, conserved site BER92_RS18350 IPR036691 Endonuclease/exonuclease/phosphatase superfamily BER92_RS18350 IPR005135 Endonuclease/exonuclease/phosphatase BER92_RS18355 IPR023031 Orotate phosphoribosyltransferase BER92_RS18355 IPR004467 Orotate phosphoribosyl transferase domain BER92_RS18355 IPR000836 Phosphoribosyltransferase domain BER92_RS18355 IPR029057 Phosphoribosyltransferase-like BER92_RS18365 IPR025669 AAA domain BER92_RS18365 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS18370 IPR003115 ParB/Sulfiredoxin BER92_RS18370 IPR004437 ParB/RepB/Spo0J partition protein BER92_RS18370 IPR041468 ParB/Spo0J, HTH domain BER92_RS18370 IPR036086 ParB/Sulfiredoxin superfamily BER92_RS18385 IPR036291 NAD(P)-binding domain superfamily BER92_RS18385 IPR001509 NAD-dependent epimerase/dehydratase BER92_RS18390 IPR001173 Glycosyltransferase 2-like BER92_RS18390 IPR029044 Nucleotide-diphospho-sugar transferases BER92_RS18405 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III BER92_RS18405 IPR005843 Alpha-D-phosphohexomutase, C-terminal BER92_RS18405 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III BER92_RS18405 IPR005841 Alpha-D-phosphohexomutase superfamily BER92_RS18405 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I BER92_RS18405 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II BER92_RS18405 IPR016066 Alpha-D-phosphohexomutase, conserved site BER92_RS18405 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily BER92_RS18410 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase BER92_RS18410 IPR036157 dUTPase-like superfamily BER92_RS18410 IPR029054 dUTPase-like BER92_RS18410 IPR033704 dUTPase, trimeric BER92_RS18415 IPR003382 Flavoprotein BER92_RS18415 IPR036551 Flavin prenyltransferase-like BER92_RS18415 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal BER92_RS18415 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC BER92_RS18415 IPR035929 CoaB-like superfamily BER92_RS18420 IPR020891 Uncharacterised protein family UPF0758, conserved site BER92_RS18420 IPR010994 RuvA domain 2-like BER92_RS18420 IPR025657 RadC-like JAB domain BER92_RS18420 IPR001405 Uncharacterised protein family UPF0758 BER92_RS18420 IPR037518 MPN domain BER92_RS18425 IPR035684 Arginyl-tRNA synthetase, catalytic core domain BER92_RS18425 IPR008909 DALR anticodon binding BER92_RS18425 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily BER92_RS18425 IPR005148 Arginyl tRNA synthetase N-terminal domain BER92_RS18425 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding BER92_RS18425 IPR001278 Arginine-tRNA ligase BER92_RS18425 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS18425 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site BER92_RS18435 IPR036291 NAD(P)-binding domain superfamily BER92_RS18435 IPR020904 Short-chain dehydrogenase/reductase, conserved site BER92_RS18435 IPR002347 Short-chain dehydrogenase/reductase SDR BER92_RS18465 IPR004276 Glycosyltransferase family 28, N-terminal domain BER92_RS18470 IPR010071 Amino acid adenylation domain BER92_RS18470 IPR029058 Alpha/Beta hydrolase fold BER92_RS18470 IPR036736 ACP-like superfamily BER92_RS18470 IPR009081 Phosphopantetheine binding ACP domain BER92_RS18470 IPR020802 Polyketide synthase, thioesterase domain BER92_RS18470 IPR020806 Polyketide synthase, phosphopantetheine-binding domain BER92_RS18470 IPR001242 Condensation domain BER92_RS18470 IPR001031 Thioesterase BER92_RS18470 IPR025110 AMP-binding enzyme, C-terminal domain BER92_RS18470 IPR020845 AMP-binding, conserved site BER92_RS18470 IPR000873 AMP-dependent synthetase/ligase BER92_RS18470 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily BER92_RS18470 IPR042099 AMP-dependent synthetase-like superfamily BER92_RS18475 IPR008490 Transposase InsH, N-terminal BER92_RS18480 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS18480 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS18480 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS18480 IPR005467 Histidine kinase domain BER92_RS18480 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS18480 IPR003660 HAMP domain BER92_RS18480 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS18485 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS18485 IPR039420 Transcriptional regulatory protein WalR-like BER92_RS18485 IPR001789 Signal transduction response regulator, receiver domain BER92_RS18485 IPR001867 OmpR/PhoB-type DNA-binding domain BER92_RS18485 IPR011006 CheY-like superfamily BER92_RS18495 IPR004653 tRNA-dihydrouridine(20/20a) synthase BER92_RS18495 IPR001269 tRNA-dihydrouridine synthase BER92_RS18495 IPR018517 tRNA-dihydrouridine synthase, conserved site BER92_RS18495 IPR013785 Aldolase-type TIM barrel BER92_RS18495 IPR035587 DUS-like, FMN-binding domain BER92_RS18515 IPR020835 Catalase superfamily BER92_RS18515 IPR010582 Catalase immune-responsive domain BER92_RS18515 IPR002226 Catalase haem-binding site BER92_RS18515 IPR037060 Catalase core domain superfamily BER92_RS18515 IPR018028 Catalase, mono-functional, haem-containing BER92_RS18515 IPR011614 Catalase core domain BER92_RS18515 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 BER92_RS18515 IPR024708 Catalase active site BER92_RS18520 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS18520 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type BER92_RS18520 IPR039000 ATP-dependent DNA helicase DinG BER92_RS18520 IPR010614 DEAD2 BER92_RS18520 IPR001650 Helicase, C-terminal BER92_RS18520 IPR006555 ATP-dependent helicase, C-terminal BER92_RS18530 IPR036291 NAD(P)-binding domain superfamily BER92_RS18530 IPR041121 SDH, C-terminal BER92_RS18530 IPR011342 Shikimate dehydrogenase BER92_RS18530 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal BER92_RS18530 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BER92_RS18530 IPR022893 Shikimate dehydrogenase family BER92_RS18540 IPR008254 Flavodoxin/nitric oxide synthase BER92_RS18540 IPR029039 Flavoprotein-like superfamily BER92_RS18540 IPR017927 FAD-binding domain, ferredoxin reductase-type BER92_RS18540 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria BER92_RS18540 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase BER92_RS18540 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding BER92_RS18540 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain BER92_RS18540 IPR001094 Flavodoxin-like BER92_RS18540 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily BER92_RS18540 IPR017938 Riboflavin synthase-like beta-barrel BER92_RS18540 IPR001433 Oxidoreductase FAD/NAD(P)-binding BER92_RS18540 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BER92_RS18545 IPR013785 Aldolase-type TIM barrel BER92_RS18545 IPR030656 Delta-aminolevulinic acid dehydratase, active site BER92_RS18545 IPR001731 Delta-aminolevulinic acid dehydratase BER92_RS18560 IPR008490 Transposase InsH, N-terminal BER92_RS18585 IPR003824 Undecaprenyl-diphosphatase UppP BER92_RS18590 IPR008146 Glutamine synthetase, catalytic domain BER92_RS18590 IPR004809 Glutamine synthetase type I BER92_RS18590 IPR027303 Glutamine synthetase, glycine-rich site BER92_RS18590 IPR001637 Glutamine synthetase class-I, adenylation site BER92_RS18590 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain BER92_RS18590 IPR036651 Glutamine synthetase, N-terminal domain superfamily BER92_RS18590 IPR008147 Glutamine synthetase, beta-Grasp domain BER92_RS18590 IPR027302 Glutamine synthetase, N-terminal conserved site BER92_RS18595 IPR017918 Nitrogen regulatory protein PII, conserved site BER92_RS18595 IPR002187 Nitrogen regulatory protein PII BER92_RS18595 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BER92_RS18595 IPR002332 Nitrogen regulatory protein P-II, urydylation site BER92_RS18595 IPR011322 Nitrogen regulatory PII-like, alpha/beta BER92_RS18600 IPR024041 Ammonium transporter AmtB-like domain BER92_RS18600 IPR018047 Ammonium transporter, conserved site BER92_RS18600 IPR001905 Ammonium transporter BER92_RS18600 IPR029020 Ammonium/urea transporter BER92_RS18605 IPR003594 Histidine kinase/HSP90-like ATPase BER92_RS18605 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain BER92_RS18605 IPR000014 PAS domain BER92_RS18605 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BER92_RS18605 IPR035965 PAS domain superfamily BER92_RS18605 IPR013767 PAS fold BER92_RS18605 IPR004358 Signal transduction histidine kinase-related protein, C-terminal BER92_RS18605 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily BER92_RS18605 IPR005467 Histidine kinase domain BER92_RS18610 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BER92_RS18610 IPR025944 Sigma-54 interaction domain, conserved site BER92_RS18610 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BER92_RS18610 IPR009057 Homeobox-like domain superfamily BER92_RS18610 IPR002078 RNA polymerase sigma factor 54 interaction domain BER92_RS18610 IPR010114 DNA-binding transcriptional regulator NtrC BER92_RS18610 IPR001789 Signal transduction response regulator, receiver domain BER92_RS18610 IPR011006 CheY-like superfamily BER92_RS18610 IPR003593 AAA+ ATPase domain BER92_RS18610 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS18610 IPR002197 DNA binding HTH domain, Fis-type BER92_RS18615 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily BER92_RS18615 IPR001424 Superoxide dismutase, copper/zinc binding domain BER92_RS18615 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone BER92_RS18615 IPR018152 Superoxide dismutase, copper/zinc, binding site BER92_RS18620 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone BER92_RS18620 IPR001424 Superoxide dismutase, copper/zinc binding domain BER92_RS18620 IPR018152 Superoxide dismutase, copper/zinc, binding site BER92_RS18620 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily BER92_RS18630 IPR025161 Putative transposase IS4/IS5 family BER92_RS18650 IPR002123 Phospholipid/glycerol acyltransferase BER92_RS18650 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase BER92_RS18655 IPR029069 HotDog domain superfamily BER92_RS18655 IPR003736 Phenylacetic acid degradation-related domain BER92_RS18655 IPR006683 Thioesterase domain BER92_RS18660 IPR025202 Phospholipase D-like domain BER92_RS18660 IPR001736 Phospholipase D/Transphosphatidylase BER92_RS18670 IPR029033 Histidine phosphatase superfamily BER92_RS18670 IPR013078 Histidine phosphatase superfamily, clade-1 BER92_RS18675 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 BER92_RS18675 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS18675 IPR000808 Mrp, conserved site BER92_RS18675 IPR019591 Mrp/NBP35 ATP-binding protein BER92_RS18675 IPR002744 MIP18 family-like BER92_RS18675 IPR034904 Fe-S cluster assembly domain superfamily BER92_RS18710 IPR016187 C-type lectin fold BER92_RS18710 IPR024775 DinB-like domain BER92_RS18710 IPR034660 DinB/YfiT-like putative metalloenzymes BER92_RS18710 IPR017806 Ergothioneine biosynthesis protein EgtB BER92_RS18710 IPR032890 Hercynine oxygenase, Actinobacteria BER92_RS18710 IPR042095 Sulfatase-modifying factor enzyme superfamily BER92_RS18710 IPR005532 Sulfatase-modifying factor enzyme BER92_RS18720 IPR000515 ABC transporter type 1, transmembrane domain MetI-like BER92_RS18720 IPR035906 MetI-like superfamily BER92_RS18725 IPR003593 AAA+ ATPase domain BER92_RS18725 IPR003439 ABC transporter-like BER92_RS18725 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS18725 IPR017871 ABC transporter, conserved site BER92_RS18735 IPR017871 ABC transporter, conserved site BER92_RS18735 IPR003439 ABC transporter-like BER92_RS18735 IPR003593 AAA+ ATPase domain BER92_RS18735 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS18740 IPR000485 AsnC-type HTH domain BER92_RS18740 IPR011008 Dimeric alpha-beta barrel BER92_RS18740 IPR036388 Winged helix-like DNA-binding domain superfamily BER92_RS18740 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BER92_RS18740 IPR019888 Transcription regulator AsnC-type BER92_RS18740 IPR036390 Winged helix DNA-binding domain superfamily BER92_RS18740 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BER92_RS18745 IPR036951 Aromatic amino acid hydroxylase superfamily BER92_RS18745 IPR001273 Aromatic amino acid hydroxylase BER92_RS18745 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site BER92_RS18745 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily BER92_RS18745 IPR019774 Aromatic amino acid hydroxylase, C-terminal BER92_RS18745 IPR005960 Phenylalanine-4-hydroxylase, monomeric form BER92_RS18750 IPR020904 Short-chain dehydrogenase/reductase, conserved site BER92_RS18750 IPR036291 NAD(P)-binding domain superfamily BER92_RS18750 IPR002347 Short-chain dehydrogenase/reductase SDR BER92_RS18750 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase BER92_RS18755 IPR007045 5-keto 4-deoxyuronate isomerase BER92_RS18755 IPR021120 KduI/IolB isomerase BER92_RS18755 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal BER92_RS18755 IPR014710 RmlC-like jelly roll fold BER92_RS18755 IPR011051 RmlC-like cupin domain superfamily BER92_RS18765 IPR023588 Transcription regulator HTH, PurR BER92_RS18765 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BER92_RS18765 IPR028082 Periplasmic binding protein-like I BER92_RS18765 IPR000843 LacI-type HTH domain BER92_RS18780 IPR018389 TRAP transporter solute receptor DctP/TeaA BER92_RS18780 IPR038404 TRAP transporter solute receptor DctP superfamily BER92_RS18780 IPR004682 TRAP transporter solute receptor, DctP family BER92_RS18790 IPR029058 Alpha/Beta hydrolase fold BER92_RS18790 IPR013830 SGNH hydrolase-type esterase domain BER92_RS18790 IPR036514 SGNH hydrolase superfamily BER92_RS18790 IPR013094 Alpha/beta hydrolase fold-3 BER92_RS18795 IPR019826 Carboxylesterase type B, active site BER92_RS18795 IPR029058 Alpha/Beta hydrolase fold BER92_RS18795 IPR002018 Carboxylesterase, type B BER92_RS18800 IPR023210 NADP-dependent oxidoreductase domain BER92_RS18800 IPR036812 NADP-dependent oxidoreductase domain superfamily BER92_RS18805 IPR014756 Immunoglobulin E-set BER92_RS18805 IPR013783 Immunoglobulin-like fold BER92_RS18805 IPR013780 Glycosyl hydrolase, all-beta BER92_RS18805 IPR017853 Glycoside hydrolase superfamily BER92_RS18805 IPR004193 Glycoside hydrolase, family 13, N-terminal BER92_RS18805 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta BER92_RS18805 IPR037439 1,4-alpha-glucan-branching enzyme BER92_RS18805 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB BER92_RS18805 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BER92_RS18810 IPR012810 Trehalose synthase/alpha-amylase, N-terminal BER92_RS18810 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BER92_RS18810 IPR013780 Glycosyl hydrolase, all-beta BER92_RS18810 IPR017853 Glycoside hydrolase superfamily BER92_RS18810 IPR032091 Maltogenic Amylase, C-terminal BER92_RS18815 IPR006047 Glycosyl hydrolase, family 13, catalytic domain BER92_RS18815 IPR013780 Glycosyl hydrolase, all-beta BER92_RS18815 IPR017853 Glycoside hydrolase superfamily BER92_RS18815 IPR013783 Immunoglobulin-like fold BER92_RS18815 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase BER92_RS18815 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S BER92_RS18870 IPR002559 Transposase, IS4-like BER92_RS18875 IPR025161 Putative transposase IS4/IS5 family BER92_RS18885 IPR017853 Glycoside hydrolase superfamily BER92_RS18885 IPR018087 Glycoside hydrolase, family 5, conserved site BER92_RS18885 IPR001547 Glycoside hydrolase, family 5 BER92_RS18895 IPR017853 Glycoside hydrolase superfamily BER92_RS18895 IPR018087 Glycoside hydrolase, family 5, conserved site BER92_RS18895 IPR001547 Glycoside hydrolase, family 5 BER92_RS18900 IPR013149 Alcohol dehydrogenase, C-terminal BER92_RS18900 IPR013154 Alcohol dehydrogenase, N-terminal BER92_RS18900 IPR036291 NAD(P)-binding domain superfamily BER92_RS18900 IPR020843 Polyketide synthase, enoylreductase domain BER92_RS18900 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BER92_RS18900 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site BER92_RS18900 IPR011032 GroES-like superfamily BER92_RS18905 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BER92_RS18905 IPR036188 FAD/NAD(P)-binding domain superfamily BER92_RS18905 IPR023753 FAD/NAD(P)-binding domain BER92_RS18905 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 BER92_RS18905 IPR009051 Alpha-helical ferredoxin BER92_RS18905 IPR028261 Dihydroprymidine dehydrogenase domain II BER92_RS18910 IPR017932 Glutamine amidotransferase type 2 domain BER92_RS18910 IPR002489 Glutamate synthase, alpha subunit, C-terminal BER92_RS18910 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily BER92_RS18910 IPR002932 Glutamate synthase domain BER92_RS18910 IPR029055 Nucleophile aminohydrolases, N-terminal BER92_RS18910 IPR013785 Aldolase-type TIM barrel BER92_RS18910 IPR006982 Glutamate synthase, central-N BER92_RS18925 IPR008909 DALR anticodon binding BER92_RS18925 IPR006194 Glycine-tRNA synthetase, heterodimeric BER92_RS18925 IPR015944 Glycine-tRNA ligase, beta subunit BER92_RS18930 IPR006194 Glycine-tRNA synthetase, heterodimeric BER92_RS18930 IPR002310 Glycine-tRNA ligase, alpha subunit BER92_RS18935 IPR013374 ATPase, type IV, pilus assembly, PilB BER92_RS18935 IPR042181 Type II secretion system, protein E, N-terminal BER92_RS18935 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS18935 IPR001482 Type II/IV secretion system protein BER92_RS18935 IPR037257 General secretory system II, protein E, N-terminal superfamily BER92_RS18935 IPR007831 General secretory system II, protein E, N-terminal BER92_RS18935 IPR003593 AAA+ ATPase domain BER92_RS18940 IPR029062 Class I glutamine amidotransferase-like BER92_RS18940 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS18940 IPR025777 GMP synthetase ATP pyrophosphatase domain BER92_RS18940 IPR022955 GMP synthase BER92_RS18940 IPR004739 GMP synthase, glutamine amidotransferase BER92_RS18940 IPR001674 GMP synthase, C-terminal BER92_RS18940 IPR017926 Glutamine amidotransferase BER92_RS18950 IPR002033 Sec-independent periplasmic protein translocase TatC BER92_RS18950 IPR019820 Sec-independent periplasmic protein translocase, conserved site BER92_RS18955 IPR003369 Sec-independent protein translocase protein TatA/B/E BER92_RS18955 IPR018448 Twin-arginine translocation protein TatB BER92_RS18960 IPR006312 Sec-independent protein translocase protein TatA/E BER92_RS18960 IPR003369 Sec-independent protein translocase protein TatA/B/E BER92_RS18970 IPR033659 Ferrochelatase, N-terminal BER92_RS18970 IPR019772 Ferrochelatase, active site BER92_RS18970 IPR001015 Ferrochelatase BER92_RS18970 IPR033644 Ferrochelatase, C-terminal BER92_RS18975 IPR000073 Alpha/beta hydrolase fold-1 BER92_RS18975 IPR029058 Alpha/Beta hydrolase fold BER92_RS18975 IPR000639 Epoxide hydrolase-like BER92_RS18985 IPR007476 Putative exonuclease, RdgC BER92_RS18990 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal BER92_RS18990 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BER92_RS18990 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type BER92_RS18990 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase BER92_RS18995 IPR000843 LacI-type HTH domain BER92_RS18995 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BER92_RS18995 IPR028082 Periplasmic binding protein-like I BER92_RS18995 IPR006377 Catabolite control protein A BER92_RS19000 IPR037054 Alpha-glucuronidase, C-terminal domain superfamily BER92_RS19000 IPR011395 Alpha glucuronidase BER92_RS19000 IPR017853 Glycoside hydrolase superfamily BER92_RS19000 IPR011100 Glycosyl hydrolase family 67, catalytic domain BER92_RS19000 IPR005154 Alpha glucuronidase, N-terminal BER92_RS19000 IPR011099 Glycosyl hydrolase family 67, C-terminal BER92_RS19000 IPR029018 Beta-hexosaminidase-like, domain 2 BER92_RS19025 IPR025948 HTH-like domain BER92_RS19025 IPR036397 Ribonuclease H superfamily BER92_RS19025 IPR012337 Ribonuclease H-like superfamily BER92_RS19025 IPR001584 Integrase, catalytic core BER92_RS19030 IPR009057 Homeobox-like domain superfamily BER92_RS19030 IPR002514 Transposase IS3/IS911family BER92_RS19055 IPR016053 Haem oxygenase-like BER92_RS19055 IPR016084 Haem oxygenase-like, multi-helical BER92_RS19070 IPR025532 Glucose-6-phosphate 1-epimerase BER92_RS19070 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase BER92_RS19070 IPR014718 Glycoside hydrolase-type carbohydrate-binding BER92_RS19070 IPR011013 Galactose mutarotase-like domain superfamily BER92_RS19080 IPR032710 NTF2-like domain superfamily BER92_RS19080 IPR004027 SEC-C motif BER92_RS19080 IPR023006 Uncharacterised protein family UPF0225 BER92_RS19085 IPR002781 Transmembrane protein TauE-like BER92_RS19125 IPR018234 GTP cyclohydrolase I, conserved site BER92_RS19125 IPR001474 GTP cyclohydrolase I BER92_RS19125 IPR020602 GTP cyclohydrolase I domain BER92_RS19130 IPR020846 Major facilitator superfamily domain BER92_RS19130 IPR005828 Major facilitator, sugar transporter-like BER92_RS19130 IPR036259 MFS transporter superfamily BER92_RS19130 IPR004736 MFS transporter, metabolite:H symporter BER92_RS19130 IPR005829 Sugar transporter, conserved site BER92_RS19155 IPR001584 Integrase, catalytic core BER92_RS19155 IPR025948 HTH-like domain BER92_RS19155 IPR012337 Ribonuclease H-like superfamily BER92_RS19155 IPR036397 Ribonuclease H superfamily BER92_RS19160 IPR008490 Transposase InsH, N-terminal BER92_RS19160 IPR002559 Transposase, IS4-like BER92_RS19165 IPR008490 Transposase InsH, N-terminal BER92_RS19175 IPR013430 Toxin-antitoxin system, antidote protein, HigA BER92_RS19175 IPR010982 Lambda repressor-like, DNA-binding domain superfamily BER92_RS19175 IPR001387 Cro/C1-type helix-turn-helix domain BER92_RS19180 IPR007711 Toxin HigB-1 BER92_RS19180 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily BER92_RS19185 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS19185 IPR006344 RecBCD enzyme subunit RecD BER92_RS19185 IPR027785 UvrD-like helicase C-terminal domain BER92_RS19190 IPR011335 Restriction endonuclease type II-like BER92_RS19190 IPR014017 UvrD-like DNA helicase, C-terminal BER92_RS19190 IPR014016 UvrD-like helicase, ATP-binding domain BER92_RS19190 IPR004586 RecBCD enzyme subunit RecB BER92_RS19190 IPR011604 Exonuclease, phage-type/RecB, C-terminal BER92_RS19190 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type BER92_RS19190 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS19190 IPR000212 DNA helicase, UvrD/REP type BER92_RS19190 IPR034739 UvrD/AddA helicase, N-terminal BER92_RS19195 IPR013986 DExx box DNA helicase domain superfamily BER92_RS19195 IPR011335 Restriction endonuclease type II-like BER92_RS19195 IPR006697 RecBCD enzyme subunit RecC BER92_RS19195 IPR041500 RecC, C-terminal BER92_RS19195 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS19200 IPR003439 ABC transporter-like BER92_RS19200 IPR017871 ABC transporter, conserved site BER92_RS19200 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS19200 IPR003593 AAA+ ATPase domain BER92_RS19200 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl BER92_RS19205 IPR003453 ABC transport permease subunit MlaE, Proteobacteria BER92_RS19205 IPR030802 ABC transporter permease MalE BER92_RS19210 IPR003399 Mce/MlaD BER92_RS19210 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD BER92_RS19215 IPR042245 Tgt2/MlaC superfamily BER92_RS19215 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC BER92_RS19225 IPR007428 MlaA lipoprotein BER92_RS19235 IPR033674 Thioredoxin/glutathione peroxidase BtuE BER92_RS19235 IPR000889 Glutathione peroxidase BER92_RS19235 IPR029760 Glutathione peroxidase conserved site BER92_RS19235 IPR036249 Thioredoxin-like superfamily BER92_RS19235 IPR029759 Glutathione peroxidase active site BER92_RS19245 IPR003798 DNA recombination RmuC BER92_RS19255 IPR004758 Amino acid transporter BER92_RS19255 IPR002293 Amino acid/polyamine transporter I BER92_RS19265 IPR000160 GGDEF domain BER92_RS19265 IPR029016 GAF-like domain superfamily BER92_RS19265 IPR029787 Nucleotide cyclase BER92_RS19270 IPR018197 Glycerate kinase, restriction-enzyme-like fold BER92_RS19270 IPR036129 Glycerate kinase superfamily BER92_RS19270 IPR004381 Glycerate kinase BER92_RS19270 IPR018193 Glycerate kinase, flavodoxin-like fold BER92_RS19275 IPR036259 MFS transporter superfamily BER92_RS19275 IPR011701 Major facilitator superfamily BER92_RS19275 IPR020846 Major facilitator superfamily domain BER92_RS19285 IPR015947 PUA-like superfamily BER92_RS19285 IPR036974 PUA domain superfamily BER92_RS19285 IPR041532 RlmI, PUA-like domain BER92_RS19285 IPR023542 rRNA large subunit methyltransferase I BER92_RS19285 IPR019614 S-adenosylmethionine-dependent methyltransferase BER92_RS19285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BER92_RS19285 IPR002478 PUA domain BER92_RS19290 IPR005496 Integral membrane protein TerC BER92_RS19290 IPR022369 Integral membrane protein TerC, riboswitch-linked BER92_RS19295 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily BER92_RS19295 IPR030395 Glycerophosphodiester phosphodiesterase domain BER92_RS19300 IPR009057 Homeobox-like domain superfamily BER92_RS19300 IPR002514 Transposase IS3/IS911family BER92_RS19310 IPR018948 GTP-binding protein TrmE, N-terminal BER92_RS19310 IPR006073 GTP binding domain BER92_RS19310 IPR004520 tRNA modification GTPase MnmE BER92_RS19310 IPR027368 tRNA modification GTPase MnmE domain 2 BER92_RS19310 IPR025867 MnmE, helical domain BER92_RS19310 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS19310 IPR005225 Small GTP-binding protein domain BER92_RS19310 IPR031168 TrmE-type guanine nucleotide-binding domain BER92_RS19310 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 BER92_RS19315 IPR028055 Membrane insertase YidC/Oxa1, C-terminal BER92_RS19315 IPR028053 Membrane insertase YidC, N-terminal BER92_RS19315 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 BER92_RS19315 IPR038210 Membrane insertase YidC, periplasmic domain BER92_RS19315 IPR019998 Membrane insertase YidC BER92_RS19315 IPR038221 YidC, periplasmic domain superfamily BER92_RS19320 IPR000100 Ribonuclease P BER92_RS19320 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BER92_RS19320 IPR020539 Ribonuclease P, conserved site BER92_RS19320 IPR020568 Ribosomal protein S5 domain 2-type fold BER92_RS19325 IPR000271 Ribosomal protein L34 BER92_RS19325 IPR020939 Ribosomal protein L34, conserved site BER92_RS19505 IPR018312 Chromosomal replication control, initiator DnaA, conserved site BER92_RS19505 IPR013317 Chromosomal replication initiator protein DnaA BER92_RS19505 IPR013159 Chromosomal replication initiator, DnaA C-terminal BER92_RS19505 IPR024633 DnaA N-terminal domain BER92_RS19505 IPR038454 DnaA, N-terminal domain superfamily BER92_RS19505 IPR003593 AAA+ ATPase domain BER92_RS19505 IPR020591 Chromosomal replication control, initiator DnaA-like BER92_RS19505 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS19505 IPR010921 Trp repressor/replication initiator BER92_RS19505 IPR001957 Chromosomal replication control, initiator DnaA BER92_RS19540 IPR042174 DNA-binding RecF, domain 2 BER92_RS19540 IPR001238 DNA-binding, RecF BER92_RS19540 IPR018078 DNA-binding, RecF, conserved site BER92_RS19540 IPR027417 P-loop containing nucleoside triphosphate hydrolase BER92_RS19540 IPR003395 RecF/RecN/SMC, N-terminal BER92_RS19600 IPR003400 Biopolymer transport protein ExbD/TolR