BER92_RS00005 SM00382 ATPases associated with a variety of cellular activities BER92_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain BER92_RS00010 SM00480 DNA polymerase III beta subunit BER92_RS00025 SM00387 Histidine kinase-like ATPases BER92_RS00025 SM00433 TopoisomeraseII BER92_RS00040 SM00028 Tetratricopeptide repeats BER92_RS00085 SM00155 Phospholipase D. Active site motifs. BER92_RS00120 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BER92_RS00120 SM00245 tail specific protease BER92_RS00195 SM00487 DEAD-like helicases superfamily BER92_RS00195 SM00490 helicase superfamily c-terminal domain BER92_RS00215 SM00986 Uracil DNA glycosylase superfamily BER92_RS00215 SM00987 UreE urease accessory protein, C-terminal domain BER92_RS00220 SM00448 cheY-homologous receiver domain BER92_RS00230 SM00382 ATPases associated with a variety of cellular activities BER92_RS00235 SM00487 DEAD-like helicases superfamily BER92_RS00235 SM00490 helicase superfamily c-terminal domain BER92_RS00245 SM00357 Cold shock protein domain BER92_RS00245 SM00382 ATPases associated with a variety of cellular activities BER92_RS00245 SM00959 Rho termination factor, N-terminal domain BER92_RS00275 SM00257 Lysin motif BER92_RS00315 SM01150 BER92_RS00315 BER92_RS00400 SM00563 Phosphate acyltransferases BER92_RS00405 SM00829 Enoylreductase BER92_RS00515 SM00487 DEAD-like helicases superfamily BER92_RS00515 SM00490 helicase superfamily c-terminal domain BER92_RS00525 SM00326 Src homology 3 domains BER92_RS00530 SM00861 Transketolase, pyrimidine binding domain BER92_RS00560 SM00347 helix_turn_helix multiple antibiotic resistance protein BER92_RS00610 SM00382 ATPases associated with a variety of cellular activities BER92_RS00630 SM00382 ATPases associated with a variety of cellular activities BER92_RS00995 SM00257 Lysin motif BER92_RS01020 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BER92_RS01020 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BER92_RS01020 SM00493 BER92_RS01020 BER92_RS01075 SM00564 beta-propeller repeat BER92_RS01095 SM00387 Histidine kinase-like ATPases BER92_RS01095 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS01095 SM00448 cheY-homologous receiver domain BER92_RS01105 SM00346 helix_turn_helix isocitrate lyase regulation BER92_RS01120 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BER92_RS01145 SM00421 helix_turn_helix, Lux Regulon BER92_RS01145 SM00448 cheY-homologous receiver domain BER92_RS01220 SM00155 Phospholipase D. Active site motifs. BER92_RS01390 SM01060 BER92_RS01390 BER92_RS01430 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BER92_RS01450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BER92_RS01450 SM00387 Histidine kinase-like ATPases BER92_RS01450 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS01455 SM00448 cheY-homologous receiver domain BER92_RS01455 SM00862 Transcriptional regulatory protein, C terminal BER92_RS01565 SM00052 Putative diguanylate phosphodiesterase BER92_RS01580 SM00382 ATPases associated with a variety of cellular activities BER92_RS01590 SM00938 Nitrogen regulatory protein P-II BER92_RS01640 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BER92_RS01640 SM00474 3'-5' exonuclease BER92_RS01640 SM00475 5'-3' exonuclease BER92_RS01640 SM00482 DNA polymerase A domain BER92_RS01695 SM00563 Phosphate acyltransferases BER92_RS01730 SM00822 BER92_RS01730 BER92_RS01750 SM00825 Beta-ketoacyl synthase BER92_RS01760 SM00248 ankyrin repeats BER92_RS01765 SM00226 Low molecular weight phosphatase family BER92_RS01785 SM01057 Eukaryotic-type carbonic anhydrase BER92_RS01790 SM00116 Domain in cystathionine beta-synthase and other proteins. BER92_RS01790 SM00924 MgtE intracellular N domain BER92_RS01795 SM00881 CoA binding domain BER92_RS01835 SM00487 DEAD-like helicases superfamily BER92_RS01835 SM00490 helicase superfamily c-terminal domain BER92_RS02080 SM00450 Rhodanese Homology Domain BER92_RS02150 SM00967 RNA 2'-O ribose methyltransferase substrate binding BER92_RS02180 SM00838 Elongation factor G C-terminus BER92_RS02230 SM00829 Enoylreductase BER92_RS02275 SM00382 ATPases associated with a variety of cellular activities BER92_RS02285 SM00829 Enoylreductase BER92_RS02300 SM00855 Phosphoglycerate mutase family BER92_RS02315 SM00528 Domain in histone-like proteins of HNS family BER92_RS02320 SM00642 Alpha-amylase domain BER92_RS02345 SM00448 cheY-homologous receiver domain BER92_RS02345 SM00862 Transcriptional regulatory protein, C terminal BER92_RS02350 SM00387 Histidine kinase-like ATPases BER92_RS02350 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS02455 SM00829 Enoylreductase BER92_RS02565 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BER92_RS02565 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BER92_RS02565 SM00091 PAS domain BER92_RS02565 SM00267 diguanylate cyclase BER92_RS02580 SM00637 BER92_RS02580 BER92_RS02610 SM00448 cheY-homologous receiver domain BER92_RS02610 SM00850 LytTr DNA-binding domain BER92_RS02690 SM00382 ATPases associated with a variety of cellular activities BER92_RS02690 SM01086 C-terminal, D2-small domain, of ClpB protein BER92_RS02720 SM00267 diguanylate cyclase BER92_RS02725 SM01263 BER92_RS02725 BER92_RS02745 SM00268 Actin BER92_RS02770 SM00710 Parallel beta-helix repeats BER92_RS02785 SM00936 Penicillin-binding protein 5, C-terminal domain BER92_RS02805 SM00729 Elongator protein 3, MiaB family, Radical SAM BER92_RS02830 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BER92_RS02830 SM00245 tail specific protease BER92_RS02870 SM01350 BER92_RS02870 BER92_RS02880 SM00749 bacterial OsmY and nodulation domain BER92_RS02885 SM00387 Histidine kinase-like ATPases BER92_RS02885 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS02890 SM00448 cheY-homologous receiver domain BER92_RS02895 SM00387 Histidine kinase-like ATPases BER92_RS02895 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS02895 SM00448 cheY-homologous receiver domain BER92_RS02950 SM00345 helix_turn_helix gluconate operon transcriptional repressor BER92_RS02950 SM00866 BER92_RS02950 BER92_RS02960 SM00354 helix_turn _helix lactose operon repressor BER92_RS02985 SM00829 Enoylreductase BER92_RS03075 SM00450 Rhodanese Homology Domain BER92_RS03100 SM00382 ATPases associated with a variety of cellular activities BER92_RS03135 SM01154 BER92_RS03135 BER92_RS03140 SM00642 Alpha-amylase domain BER92_RS03155 SM00354 helix_turn _helix lactose operon repressor BER92_RS03160 SM00822 BER92_RS03160 BER92_RS03175 SM00448 cheY-homologous receiver domain BER92_RS03175 SM00862 Transcriptional regulatory protein, C terminal BER92_RS03180 SM00387 Histidine kinase-like ATPases BER92_RS03180 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS03190 SM00421 helix_turn_helix, Lux Regulon BER92_RS03190 SM00448 cheY-homologous receiver domain BER92_RS03225 SM00387 Histidine kinase-like ATPases BER92_RS03225 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS03225 SM00448 cheY-homologous receiver domain BER92_RS03240 SM00919 Malic enzyme, NAD binding domain BER92_RS03240 SM01274 BER92_RS03240 BER92_RS03305 SM01329 BER92_RS03305 BER92_RS03320 SM00917 LeuA allosteric (dimerisation) domain BER92_RS03365 SM00862 Transcriptional regulatory protein, C terminal BER92_RS03375 SM00342 helix_turn_helix, arabinose operon control protein BER92_RS03435 SM00464 Found in ATP-dependent protease La (LON) BER92_RS03540 SM01011 Aminopeptidase P, N-terminal domain BER92_RS03560 SM00729 Elongator protein 3, MiaB family, Radical SAM BER92_RS03580 SM00072 Guanylate kinase homologues. BER92_RS03585 SM01409 BER92_RS03585 BER92_RS03590 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BER92_RS03590 SM00954 Region found in RelA / SpoT proteins BER92_RS03600 SM00487 DEAD-like helicases superfamily BER92_RS03600 SM00490 helicase superfamily c-terminal domain BER92_RS03655 SM00965 Secretin and TonB N terminus short domain BER92_RS03795 SM00842 Cell division protein FtsA BER92_RS03800 SM00864 Tubulin/FtsZ family, GTPase domain BER92_RS03800 SM00865 Tubulin/FtsZ family, C-terminal domain BER92_RS03820 SM00957 SecA DEAD-like domain BER92_RS03820 SM00958 SecA preprotein cross-linking domain BER92_RS03850 SM00829 Enoylreductase BER92_RS03925 SM00382 ATPases associated with a variety of cellular activities BER92_RS03925 SM00448 cheY-homologous receiver domain BER92_RS03930 SM00387 Histidine kinase-like ATPases BER92_RS03930 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS03940 SM00881 CoA binding domain BER92_RS03965 SM00564 beta-propeller repeat BER92_RS04070 SM00363 S4 RNA-binding domain BER92_RS04075 SM00448 cheY-homologous receiver domain BER92_RS04085 SM00341 Helicase and RNase D C-terminal BER92_RS04085 SM00487 DEAD-like helicases superfamily BER92_RS04085 SM00490 helicase superfamily c-terminal domain BER92_RS04085 SM00956 BER92_RS04085 BER92_RS04095 SM00382 ATPases associated with a variety of cellular activities BER92_RS04095 SM00487 DEAD-like helicases superfamily BER92_RS04095 SM00490 helicase superfamily c-terminal domain BER92_RS04095 SM00847 Helicase associated domain (HA2) Add an annotation BER92_RS04120 SM00954 Region found in RelA / SpoT proteins BER92_RS04145 SM00491 BER92_RS04145 BER92_RS04165 SM00448 cheY-homologous receiver domain BER92_RS04170 SM00448 cheY-homologous receiver domain BER92_RS04175 SM00260 Two component signalling adaptor domain BER92_RS04180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BER92_RS04185 SM00073 Histidine Phosphotransfer domain BER92_RS04185 SM00260 Two component signalling adaptor domain BER92_RS04185 SM00387 Histidine kinase-like ATPases BER92_RS04185 SM00448 cheY-homologous receiver domain BER92_RS04185 SM01231 BER92_RS04185 BER92_RS04220 SM00369 Leucine-rich repeats, typical (most populated) subfamily BER92_RS04235 SM00812 Alpha-L-fucosidase BER92_RS04275 SM00860 SMI1 / KNR4 family BER92_RS04335 SM01211 BER92_RS04335 BER92_RS04355 SM00382 ATPases associated with a variety of cellular activities BER92_RS04415 SM00345 helix_turn_helix gluconate operon transcriptional repressor BER92_RS04415 SM00866 BER92_RS04415 BER92_RS04470 SM00382 ATPases associated with a variety of cellular activities BER92_RS04550 SM00996 S-adenosyl-L-homocysteine hydrolase BER92_RS04550 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BER92_RS04620 SM00387 Histidine kinase-like ATPases BER92_RS04620 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS04625 SM00448 cheY-homologous receiver domain BER92_RS04625 SM00862 Transcriptional regulatory protein, C terminal BER92_RS04635 SM00382 ATPases associated with a variety of cellular activities BER92_RS04735 SM00650 Ribosomal RNA adenine dimethylases BER92_RS04855 SM00421 helix_turn_helix, Lux Regulon BER92_RS04915 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BER92_RS04915 SM00475 5'-3' exonuclease BER92_RS05015 SM00852 Probable molybdopterin binding domain BER92_RS05020 SM00028 Tetratricopeptide repeats BER92_RS05025 SM00937 BER92_RS05025 BER92_RS05035 SM00028 Tetratricopeptide repeats BER92_RS05055 SM01400 BER92_RS05055 BER92_RS05105 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BER92_RS05105 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BER92_RS05110 SM00649 Ribosomal protein L11/L12 BER92_RS05135 SM00663 RNA polymerase I subunit A N-terminus BER92_RS05150 SM00838 Elongation factor G C-terminus BER92_RS05150 SM00889 Elongation factor G, domain IV BER92_RS05160 SM01403 BER92_RS05160 BER92_RS05180 SM01382 BER92_RS05180 BER92_RS05180 SM01383 BER92_RS05180 BER92_RS05195 SM00322 K homology RNA-binding domain BER92_RS05215 SM01374 BER92_RS05215 BER92_RS05220 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BER92_RS05280 SM00363 S4 RNA-binding domain BER92_RS05280 SM01390 BER92_RS05280 BER92_RS05285 SM00662 RNA polymerases D BER92_RS05375 SM00869 Autotransporter beta-domain BER92_RS05410 SM00530 Helix-turn-helix XRE-family like proteins BER92_RS05445 SM00267 diguanylate cyclase BER92_RS05510 SM00530 Helix-turn-helix XRE-family like proteins BER92_RS05540 SM00382 ATPases associated with a variety of cellular activities BER92_RS05615 SM00855 Phosphoglycerate mutase family BER92_RS05655 SM00052 Putative diguanylate phosphodiesterase BER92_RS05660 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BER92_RS05795 SM00116 Domain in cystathionine beta-synthase and other proteins. BER92_RS05865 SM00867 YceI-like domain BER92_RS05875 SM00867 YceI-like domain BER92_RS05880 SM00387 Histidine kinase-like ATPases BER92_RS05880 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS05880 SM00448 cheY-homologous receiver domain BER92_RS05905 SM00382 ATPases associated with a variety of cellular activities BER92_RS05905 SM00962 SRP54-type protein, GTPase domain BER92_RS05905 SM00963 SRP54-type protein, helical bundle domain BER92_RS05950 SM00363 S4 RNA-binding domain BER92_RS05980 SM00267 diguanylate cyclase BER92_RS05995 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BER92_RS06020 SM00873 B3/4 domain BER92_RS06020 SM00874 tRNA synthetase B5 domain BER92_RS06020 SM00896 Ferredoxin-fold anticodon binding domain BER92_RS06025 SM00411 bacterial (prokaryotic) histone like domain BER92_RS06030 SM00422 helix_turn_helix, mercury resistance BER92_RS06105 SM00861 Transketolase, pyrimidine binding domain BER92_RS06115 SM00507 HNH nucleases BER92_RS06185 SM00478 endonuclease III BER92_RS06190 SM00382 ATPases associated with a variety of cellular activities BER92_RS06190 SM00962 SRP54-type protein, GTPase domain BER92_RS06190 SM00963 SRP54-type protein, helical bundle domain BER92_RS06195 SM00342 helix_turn_helix, arabinose operon control protein BER92_RS06220 SM01130 BER92_RS06220 BER92_RS06280 SM00944 Pro-kumamolisin, activation domain BER92_RS06360 SM00481 DNA polymerase alpha chain like domain BER92_RS06400 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BER92_RS06455 SM00972 Spore Coat Protein U domain BER92_RS06470 SM00972 Spore Coat Protein U domain BER92_RS06480 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BER92_RS06500 SM01172 BER92_RS06500 BER92_RS06505 SM00710 Parallel beta-helix repeats BER92_RS06505 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses BER92_RS06535 SM00434 DNA Topoisomerase IV BER92_RS06540 SM00347 helix_turn_helix multiple antibiotic resistance protein BER92_RS06600 SM00347 helix_turn_helix multiple antibiotic resistance protein BER92_RS06625 SM00382 ATPases associated with a variety of cellular activities BER92_RS06635 SM00947 Carbonic anhydrase BER92_RS06655 SM00357 Cold shock protein domain BER92_RS06755 SM00530 Helix-turn-helix XRE-family like proteins BER92_RS06805 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BER92_RS06850 SM00116 Domain in cystathionine beta-synthase and other proteins. BER92_RS06850 SM01091 Transporter associated domain BER92_RS06870 SM00729 Elongator protein 3, MiaB family, Radical SAM BER92_RS06910 SM00487 DEAD-like helicases superfamily BER92_RS06910 SM00490 helicase superfamily c-terminal domain BER92_RS06925 SM00528 Domain in histone-like proteins of HNS family BER92_RS06940 SM00474 3'-5' exonuclease BER92_RS06960 SM00838 Elongation factor G C-terminus BER92_RS06975 SM00358 Double-stranded RNA binding motif BER92_RS06975 SM00535 Ribonuclease III family BER92_RS06990 SM00448 cheY-homologous receiver domain BER92_RS07000 SM01118 BER92_RS07000 BER92_RS07030 SM00357 Cold shock protein domain BER92_RS07040 SM00487 DEAD-like helicases superfamily BER92_RS07040 SM00490 helicase superfamily c-terminal domain BER92_RS07095 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BER92_RS07130 SM00257 Lysin motif BER92_RS07205 SM00052 Putative diguanylate phosphodiesterase BER92_RS07205 SM00267 diguanylate cyclase BER92_RS07205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BER92_RS07220 SM00822 BER92_RS07220 BER92_RS07265 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BER92_RS07270 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BER92_RS07320 SM00316 Ribosomal protein S1-like RNA-binding domain BER92_RS07320 SM00322 K homology RNA-binding domain BER92_RS07340 SM01387 BER92_RS07340 BER92_RS07345 SM00316 Ribosomal protein S1-like RNA-binding domain BER92_RS07345 SM00322 K homology RNA-binding domain BER92_RS07375 SM01001 AIR carboxylase BER92_RS07445 SM00448 cheY-homologous receiver domain BER92_RS07445 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BER92_RS07450 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BER92_RS07450 SM00091 PAS domain BER92_RS07450 SM00387 Histidine kinase-like ATPases BER92_RS07450 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS07450 SM00448 cheY-homologous receiver domain BER92_RS07450 SM01079 BER92_RS07450 BER92_RS07505 SM00267 diguanylate cyclase BER92_RS07505 SM00448 cheY-homologous receiver domain BER92_RS07515 SM01230 BER92_RS07515 BER92_RS07520 SM01230 BER92_RS07520 BER92_RS07545 SM00382 ATPases associated with a variety of cellular activities BER92_RS07570 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BER92_RS07570 SM00091 PAS domain BER92_RS07570 SM00911 HWE histidine kinase BER92_RS07690 SM00487 DEAD-like helicases superfamily BER92_RS07690 SM00490 helicase superfamily c-terminal domain BER92_RS07745 SM00382 ATPases associated with a variety of cellular activities BER92_RS07810 SM00382 ATPases associated with a variety of cellular activities BER92_RS07890 SM00530 Helix-turn-helix XRE-family like proteins BER92_RS07975 SM00271 DnaJ molecular chaperone homology domain BER92_RS08020 SM00382 ATPases associated with a variety of cellular activities BER92_RS08045 SM00861 Transketolase, pyrimidine binding domain BER92_RS08055 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BER92_RS08115 SM00382 ATPases associated with a variety of cellular activities BER92_RS08120 SM00345 helix_turn_helix gluconate operon transcriptional repressor BER92_RS08140 SM00984 UDP binding domain BER92_RS08160 SM00354 helix_turn _helix lactose operon repressor BER92_RS08180 SM01018 B12 binding domain BER92_RS08190 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BER92_RS08210 SM00316 Ribosomal protein S1-like RNA-binding domain BER92_RS08210 SM00357 Cold shock protein domain BER92_RS08210 SM00955 BER92_RS08210 BER92_RS08215 SM00967 RNA 2'-O ribose methyltransferase substrate binding BER92_RS08230 SM00479 BER92_RS08230 BER92_RS08240 SM00382 ATPases associated with a variety of cellular activities BER92_RS08285 SM00947 Carbonic anhydrase BER92_RS08295 SM00478 endonuclease III BER92_RS08320 SM00450 Rhodanese Homology Domain BER92_RS08330 SM00644 BER92_RS08330 BER92_RS08355 SM00981 BER92_RS08355 BER92_RS08385 SM00479 BER92_RS08385 BER92_RS08410 SM00947 Carbonic anhydrase BER92_RS08460 SM00968 SMC proteins Flexible Hinge Domain BER92_RS08465 SM00771 ZipA, C-terminal domain (FtsZ-binding) BER92_RS08470 SM00292 breast cancer carboxy-terminal domain BER92_RS08470 SM00532 Ligase N family BER92_RS08495 SM00434 DNA Topoisomerase IV BER92_RS08535 SM00345 helix_turn_helix gluconate operon transcriptional repressor BER92_RS08535 SM00866 BER92_RS08535 BER92_RS08550 SM00240 Forkhead associated domain BER92_RS08590 SM00859 Semialdehyde dehydrogenase, NAD binding domain BER92_RS08600 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BER92_RS08600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BER92_RS08605 SM00382 ATPases associated with a variety of cellular activities BER92_RS08610 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BER92_RS08610 SM00091 PAS domain BER92_RS08610 SM00387 Histidine kinase-like ATPases BER92_RS08610 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS08610 SM00448 cheY-homologous receiver domain BER92_RS08700 SM00116 Domain in cystathionine beta-synthase and other proteins. BER92_RS08700 SM01091 Transporter associated domain BER92_RS08725 SM00387 Histidine kinase-like ATPases BER92_RS08725 SM00433 TopoisomeraseII BER92_RS08745 SM01192 BER92_RS08745 BER92_RS08745 SM01193 BER92_RS08745 BER92_RS08770 SM00463 Small MutS-related domain BER92_RS08790 SM00257 Lysin motif BER92_RS08885 SM00382 ATPases associated with a variety of cellular activities BER92_RS08910 SM00363 S4 RNA-binding domain BER92_RS08935 SM00354 helix_turn _helix lactose operon repressor BER92_RS09010 SM00316 Ribosomal protein S1-like RNA-binding domain BER92_RS09015 SM00411 bacterial (prokaryotic) histone like domain BER92_RS09025 SM00028 Tetratricopeptide repeats BER92_RS09035 SM00822 BER92_RS09035 BER92_RS09085 SM00116 Domain in cystathionine beta-synthase and other proteins. BER92_RS09085 SM01240 BER92_RS09085 BER92_RS09270 SM01007 Class II Aldolase and Adducin N-terminal domain BER92_RS09310 SM00841 Elongation factor P, C-terminal BER92_RS09310 SM01185 BER92_RS09310 BER92_RS09315 SM00822 BER92_RS09315 BER92_RS09330 SM00899 BER92_RS09330 BER92_RS09360 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BER92_RS09375 SM00851 MGS-like domain BER92_RS09375 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BER92_RS09395 SM00937 BER92_RS09395 BER92_RS09405 SM00448 cheY-homologous receiver domain BER92_RS09405 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BER92_RS09415 SM00073 Histidine Phosphotransfer domain BER92_RS09415 SM00387 Histidine kinase-like ATPases BER92_RS09415 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS09415 SM00448 cheY-homologous receiver domain BER92_RS09440 SM00966 SpoVT / AbrB like domain BER92_RS09460 SM00052 Putative diguanylate phosphodiesterase BER92_RS09460 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BER92_RS09460 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BER92_RS09460 SM00091 PAS domain BER92_RS09460 SM00267 diguanylate cyclase BER92_RS09465 SM00448 cheY-homologous receiver domain BER92_RS09475 SM00138 Methyltransferase, chemotaxis proteins BER92_RS09485 SM00260 Two component signalling adaptor domain BER92_RS09495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BER92_RS09495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BER92_RS09505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BER92_RS09505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BER92_RS09510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BER92_RS09510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BER92_RS09520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BER92_RS09520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BER92_RS09540 SM00073 Histidine Phosphotransfer domain BER92_RS09540 SM00260 Two component signalling adaptor domain BER92_RS09540 SM00387 Histidine kinase-like ATPases BER92_RS09540 SM01231 BER92_RS09540 BER92_RS09545 SM00448 cheY-homologous receiver domain BER92_RS09555 SM00260 Two component signalling adaptor domain BER92_RS09720 SM00363 S4 RNA-binding domain BER92_RS09725 SM00316 Ribosomal protein S1-like RNA-binding domain BER92_RS09735 SM00421 helix_turn_helix, Lux Regulon BER92_RS09735 SM00448 cheY-homologous receiver domain BER92_RS09740 SM00450 Rhodanese Homology Domain BER92_RS09760 SM00984 UDP binding domain BER92_RS09830 SM00382 ATPases associated with a variety of cellular activities BER92_RS09830 SM01086 C-terminal, D2-small domain, of ClpB protein BER92_RS10035 SM00852 Probable molybdopterin binding domain BER92_RS10055 SM00450 Rhodanese Homology Domain BER92_RS10060 SM00852 Probable molybdopterin binding domain BER92_RS10065 SM00382 ATPases associated with a variety of cellular activities BER92_RS10070 SM00564 beta-propeller repeat BER92_RS10085 SM00028 Tetratricopeptide repeats BER92_RS10095 SM00562 BER92_RS10095 BER92_RS10125 SM00382 ATPases associated with a variety of cellular activities BER92_RS10140 SM00382 ATPases associated with a variety of cellular activities BER92_RS10140 SM00843 BER92_RS10140 BER92_RS10160 SM00316 Ribosomal protein S1-like RNA-binding domain BER92_RS10165 SM00382 ATPases associated with a variety of cellular activities BER92_RS10165 SM01086 C-terminal, D2-small domain, of ClpB protein BER92_RS10190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BER92_RS10210 SM00091 PAS domain BER92_RS10210 SM00387 Histidine kinase-like ATPases BER92_RS10215 SM00052 Putative diguanylate phosphodiesterase BER92_RS10215 SM00267 diguanylate cyclase BER92_RS10215 SM00448 cheY-homologous receiver domain BER92_RS10220 SM00387 Histidine kinase-like ATPases BER92_RS10235 SM00858 BER92_RS10235 BER92_RS10240 SM00260 Two component signalling adaptor domain BER92_RS10240 SM00448 cheY-homologous receiver domain BER92_RS10285 SM00047 Lysozyme subfamily 2 BER92_RS10325 SM00421 helix_turn_helix, Lux Regulon BER92_RS10325 SM00448 cheY-homologous receiver domain BER92_RS10335 SM00448 cheY-homologous receiver domain BER92_RS10340 SM00382 ATPases associated with a variety of cellular activities BER92_RS10380 SM00382 ATPases associated with a variety of cellular activities BER92_RS10435 SM00267 diguanylate cyclase BER92_RS10440 SM00267 diguanylate cyclase BER92_RS10455 SM00382 ATPases associated with a variety of cellular activities BER92_RS10455 SM00962 SRP54-type protein, GTPase domain BER92_RS10470 SM00448 cheY-homologous receiver domain BER92_RS10480 SM00073 Histidine Phosphotransfer domain BER92_RS10480 SM00260 Two component signalling adaptor domain BER92_RS10480 SM00387 Histidine kinase-like ATPases BER92_RS10480 SM01231 BER92_RS10480 BER92_RS10545 SM00869 Autotransporter beta-domain BER92_RS10705 SM00014 Acid phosphatase homologues BER92_RS10715 SM00387 Histidine kinase-like ATPases BER92_RS10720 SM00448 cheY-homologous receiver domain BER92_RS10730 SM00052 Putative diguanylate phosphodiesterase BER92_RS10730 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BER92_RS10730 SM00267 diguanylate cyclase BER92_RS10880 SM00758 BER92_RS10880 BER92_RS10935 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BER92_RS10960 SM01130 BER92_RS10960 BER92_RS10980 SM00670 Large family of predicted nucleotide-binding domains BER92_RS11035 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BER92_RS11045 SM00382 ATPases associated with a variety of cellular activities BER92_RS11185 SM00382 ATPases associated with a variety of cellular activities BER92_RS11195 SM01103 BER92_RS11195 BER92_RS11480 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BER92_RS11480 SM00465 GIY-YIG type nucleases (URI domain) BER92_RS11505 SM00382 ATPases associated with a variety of cellular activities BER92_RS11520 SM00849 Metallo-beta-lactamase superfamily BER92_RS11530 SM00382 ATPases associated with a variety of cellular activities BER92_RS11580 SM00382 ATPases associated with a variety of cellular activities BER92_RS11655 SM00448 cheY-homologous receiver domain BER92_RS11660 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BER92_RS11660 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BER92_RS11660 SM00091 PAS domain BER92_RS11660 SM00387 Histidine kinase-like ATPases BER92_RS11660 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS11660 SM00448 cheY-homologous receiver domain BER92_RS11665 SM00316 Ribosomal protein S1-like RNA-binding domain BER92_RS11665 SM00732 Likely ribonuclease with RNase H fold. BER92_RS11730 SM00479 BER92_RS11730 BER92_RS11740 SM00529 Helix-turn-helix diphteria tox regulatory element BER92_RS11845 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BER92_RS11865 SM00859 Semialdehyde dehydrogenase, NAD binding domain BER92_RS11900 SM00840 BER92_RS11900 BER92_RS11955 SM00656 BER92_RS11955 BER92_RS11990 SM00841 Elongation factor P, C-terminal BER92_RS11990 SM01185 BER92_RS11990 BER92_RS12025 SM00382 ATPases associated with a variety of cellular activities BER92_RS12030 SM00382 ATPases associated with a variety of cellular activities BER92_RS12030 SM00487 DEAD-like helicases superfamily BER92_RS12030 SM00490 helicase superfamily c-terminal domain BER92_RS12055 SM00357 Cold shock protein domain BER92_RS12065 SM01322 BER92_RS12065 BER92_RS12075 SM00052 Putative diguanylate phosphodiesterase BER92_RS12075 SM00267 diguanylate cyclase BER92_RS12090 SM00822 BER92_RS12090 BER92_RS12110 SM00853 MutL C terminal dimerisation domain BER92_RS12110 SM01340 BER92_RS12110 BER92_RS12115 SM00646 BER92_RS12115 BER92_RS12240 SM00828 Methyltransferase in polyketide synthase (PKS) enzymes. BER92_RS12365 SM00729 Elongator protein 3, MiaB family, Radical SAM BER92_RS12420 SM01160 BER92_RS12420 BER92_RS12530 SM00830 Chorismate mutase type II BER92_RS12545 SM00354 helix_turn _helix lactose operon repressor BER92_RS12580 SM01323 BER92_RS12580 BER92_RS12595 SM00344 helix_turn_helix ASNC type BER92_RS12660 SM00387 Histidine kinase-like ATPases BER92_RS12665 SM01126 BER92_RS12665 BER92_RS12705 SM00098 Alkaline phosphatase homologues BER92_RS12710 SM00977 TilS substrate C-terminal domain BER92_RS12760 SM00316 Ribosomal protein S1-like RNA-binding domain BER92_RS12880 SM00382 ATPases associated with a variety of cellular activities BER92_RS13025 SM00382 ATPases associated with a variety of cellular activities BER92_RS13055 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BER92_RS13055 SM00267 diguanylate cyclase BER92_RS13060 SM00363 S4 RNA-binding domain BER92_RS13070 SM00052 Putative diguanylate phosphodiesterase BER92_RS13070 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BER92_RS13070 SM00091 PAS domain BER92_RS13070 SM00267 diguanylate cyclase BER92_RS13075 SM00487 DEAD-like helicases superfamily BER92_RS13075 SM00490 helicase superfamily c-terminal domain BER92_RS13145 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BER92_RS13145 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BER92_RS13220 SM00645 Papain family cysteine protease BER92_RS13235 SM00487 DEAD-like helicases superfamily BER92_RS13235 SM00490 helicase superfamily c-terminal domain BER92_RS13235 SM00982 BER92_RS13235 BER92_RS13235 SM01058 CarD-like/TRCF domain BER92_RS13240 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BER92_RS13240 SM00534 ATPase domain of DNA mismatch repair MUTS family BER92_RS13280 SM00855 Phosphoglycerate mutase family BER92_RS13350 SM00267 diguanylate cyclase BER92_RS13420 SM00732 Likely ribonuclease with RNase H fold. BER92_RS13450 SM00382 ATPases associated with a variety of cellular activities BER92_RS13465 SM00411 bacterial (prokaryotic) histone like domain BER92_RS13485 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BER92_RS13500 SM00382 ATPases associated with a variety of cellular activities BER92_RS13530 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BER92_RS13535 SM00671 Sel1-like repeats. BER92_RS13645 SM00116 Domain in cystathionine beta-synthase and other proteins. BER92_RS13665 SM00382 ATPases associated with a variety of cellular activities BER92_RS13710 SM00924 MgtE intracellular N domain BER92_RS13755 SM00812 Alpha-L-fucosidase BER92_RS13760 SM00636 BER92_RS13760 BER92_RS13775 SM00758 BER92_RS13775 BER92_RS13775 SM01217 BER92_RS13775 BER92_RS13780 SM00382 ATPases associated with a variety of cellular activities BER92_RS13840 SM00788 Adenylosuccinate synthetase BER92_RS13850 SM00244 prohibitin homologues BER92_RS13855 SM00244 prohibitin homologues BER92_RS13860 SM00448 cheY-homologous receiver domain BER92_RS13865 SM00271 DnaJ molecular chaperone homology domain BER92_RS13945 SM00382 ATPases associated with a variety of cellular activities BER92_RS13995 SM00825 Beta-ketoacyl synthase BER92_RS14005 SM00822 BER92_RS14005 BER92_RS14010 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BER92_RS14050 SM00382 ATPases associated with a variety of cellular activities BER92_RS14060 SM00460 Transglutaminase/protease-like homologues BER92_RS14075 SM00493 BER92_RS14075 BER92_RS14085 SM00382 ATPases associated with a variety of cellular activities BER92_RS14115 SM00729 Elongator protein 3, MiaB family, Radical SAM BER92_RS14120 SM00849 Metallo-beta-lactamase superfamily BER92_RS14145 SM00331 Sigma factor PP2C-like phosphatases BER92_RS14145 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BER92_RS14150 SM00479 BER92_RS14150 BER92_RS14165 SM00849 Metallo-beta-lactamase superfamily BER92_RS14170 SM00257 Lysin motif BER92_RS14180 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BER92_RS14180 SM01232 BER92_RS14180 BER92_RS14220 SM00481 DNA polymerase alpha chain like domain BER92_RS14260 SM00974 BER92_RS14260 BER92_RS14275 SM01092 CO dehydrogenase flavoprotein C-terminal domain BER92_RS14280 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BER92_RS14365 SM00382 ATPases associated with a variety of cellular activities BER92_RS14365 SM00994 ClpX C4-type zinc finger BER92_RS14365 SM01086 C-terminal, D2-small domain, of ClpB protein BER92_RS14370 SM00382 ATPases associated with a variety of cellular activities BER92_RS14370 SM00464 Found in ATP-dependent protease La (LON) BER92_RS14375 SM00411 bacterial (prokaryotic) histone like domain BER92_RS14460 SM00382 ATPases associated with a variety of cellular activities BER92_RS14470 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BER92_RS14515 SM00382 ATPases associated with a variety of cellular activities BER92_RS14585 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BER92_RS14585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BER92_RS14600 SM00421 helix_turn_helix, Lux Regulon BER92_RS14710 SM00387 Histidine kinase-like ATPases BER92_RS14710 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS14710 SM00448 cheY-homologous receiver domain BER92_RS14715 SM00387 Histidine kinase-like ATPases BER92_RS14715 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS14715 SM00448 cheY-homologous receiver domain BER92_RS14735 SM00448 cheY-homologous receiver domain BER92_RS14740 SM00387 Histidine kinase-like ATPases BER92_RS14740 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS14770 SM00342 helix_turn_helix, arabinose operon control protein BER92_RS14775 SM00862 Transcriptional regulatory protein, C terminal BER92_RS14785 SM00382 ATPases associated with a variety of cellular activities BER92_RS14790 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BER92_RS14835 SM00904 Riboflavin kinase BER92_RS14945 SM00244 prohibitin homologues BER92_RS14970 SM00478 endonuclease III BER92_RS14985 SM00421 helix_turn_helix, Lux Regulon BER92_RS14985 SM00448 cheY-homologous receiver domain BER92_RS15020 SM00387 Histidine kinase-like ATPases BER92_RS15020 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS15025 SM00448 cheY-homologous receiver domain BER92_RS15025 SM00862 Transcriptional regulatory protein, C terminal BER92_RS15065 SM01060 BER92_RS15065 BER92_RS15075 SM00091 PAS domain BER92_RS15075 SM00342 helix_turn_helix, arabinose operon control protein BER92_RS15160 SM00382 ATPases associated with a variety of cellular activities BER92_RS15160 SM01086 C-terminal, D2-small domain, of ClpB protein BER92_RS15280 SM01329 BER92_RS15280 BER92_RS15305 SM00448 cheY-homologous receiver domain BER92_RS15305 SM00862 Transcriptional regulatory protein, C terminal BER92_RS15310 SM00387 Histidine kinase-like ATPases BER92_RS15310 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS15330 SM00014 Acid phosphatase homologues BER92_RS15380 SM00369 Leucine-rich repeats, typical (most populated) subfamily BER92_RS15400 SM01149 BER92_RS15400 BER92_RS15425 SM00220 Serine/Threonine protein kinases, catalytic domain BER92_RS15460 SM01040 BRO family, N-terminal domain BER92_RS15475 SM00487 DEAD-like helicases superfamily BER92_RS15530 SM00528 Domain in histone-like proteins of HNS family BER92_RS15545 SM00382 ATPases associated with a variety of cellular activities BER92_RS15575 SM00882 Coenzyme A transferase BER92_RS15580 SM00882 Coenzyme A transferase BER92_RS15615 SM00893 Electron transfer flavoprotein domain BER92_RS15620 SM00893 Electron transfer flavoprotein domain BER92_RS15680 SM00382 ATPases associated with a variety of cellular activities BER92_RS15700 SM00116 Domain in cystathionine beta-synthase and other proteins. BER92_RS15740 SM00487 DEAD-like helicases superfamily BER92_RS15740 SM00490 helicase superfamily c-terminal domain BER92_RS15760 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BER92_RS15805 SM00825 Beta-ketoacyl synthase BER92_RS15885 SM00830 Chorismate mutase type II BER92_RS15895 SM00382 ATPases associated with a variety of cellular activities BER92_RS15955 SM00986 Uracil DNA glycosylase superfamily BER92_RS15955 SM00987 UreE urease accessory protein, C-terminal domain BER92_RS15980 SM00382 ATPases associated with a variety of cellular activities BER92_RS15980 SM00930 BER92_RS15980 BER92_RS16055 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BER92_RS16055 SM00091 PAS domain BER92_RS16055 SM00387 Histidine kinase-like ATPases BER92_RS16055 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS16055 SM00448 cheY-homologous receiver domain BER92_RS16075 SM01005 Alanine racemase, C-terminal domain BER92_RS16085 SM00344 helix_turn_helix ASNC type BER92_RS16270 SM00878 Biotin carboxylase C-terminal domain BER92_RS16285 SM00530 Helix-turn-helix XRE-family like proteins BER92_RS16305 SM00798 AICARFT/IMPCHase bienzyme BER92_RS16305 SM00851 MGS-like domain BER92_RS16310 SM01209 BER92_RS16310 BER92_RS16310 SM01210 BER92_RS16310 BER92_RS16335 SM00563 Phosphate acyltransferases BER92_RS16525 SM00487 DEAD-like helicases superfamily BER92_RS16525 SM00490 helicase superfamily c-terminal domain BER92_RS16525 SM00847 Helicase associated domain (HA2) Add an annotation BER92_RS16560 SM00829 Enoylreductase BER92_RS16640 SM00878 Biotin carboxylase C-terminal domain BER92_RS16750 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BER92_RS16750 SM00387 Histidine kinase-like ATPases BER92_RS16775 SM00506 Appr-1"-p processing enzyme BER92_RS16820 SM00387 Histidine kinase-like ATPases BER92_RS16855 SM01126 BER92_RS16855 BER92_RS16890 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BER92_RS16905 SM00849 Metallo-beta-lactamase superfamily BER92_RS16920 SM00382 ATPases associated with a variety of cellular activities BER92_RS16960 SM00861 Transketolase, pyrimidine binding domain BER92_RS16975 SM00028 Tetratricopeptide repeats BER92_RS16975 SM00327 von Willebrand factor (vWF) type A domain BER92_RS16980 SM00327 von Willebrand factor (vWF) type A domain BER92_RS16995 SM00382 ATPases associated with a variety of cellular activities BER92_RS17060 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. BER92_RS17065 SM00986 Uracil DNA glycosylase superfamily BER92_RS17065 SM00987 UreE urease accessory protein, C-terminal domain BER92_RS17070 SM00729 Elongator protein 3, MiaB family, Radical SAM BER92_RS17135 SM00091 PAS domain BER92_RS17135 SM00138 Methyltransferase, chemotaxis proteins BER92_RS17135 SM00911 HWE histidine kinase BER92_RS17140 SM00448 cheY-homologous receiver domain BER92_RS17150 SM00382 ATPases associated with a variety of cellular activities BER92_RS17150 SM00448 cheY-homologous receiver domain BER92_RS17200 SM00382 ATPases associated with a variety of cellular activities BER92_RS17270 SM00382 ATPases associated with a variety of cellular activities BER92_RS17365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BER92_RS17365 SM00331 Sigma factor PP2C-like phosphatases BER92_RS17390 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BER92_RS17435 SM00867 YceI-like domain BER92_RS17510 SM00883 Chaperonin 10 Kd subunit BER92_RS17575 SM00642 Alpha-amylase domain BER92_RS17585 SM00642 Alpha-amylase domain BER92_RS17595 SM00642 Alpha-amylase domain BER92_RS17600 SM00642 Alpha-amylase domain BER92_RS17610 SM00267 diguanylate cyclase BER92_RS17655 SM00729 Elongator protein 3, MiaB family, Radical SAM BER92_RS17655 SM00876 Biotin and Thiamin Synthesis associated domain BER92_RS17715 SM01228 BER92_RS17715 BER92_RS17730 SM00090 RIO-like kinase BER92_RS17740 SM00420 helix_turn_helix, Deoxyribose operon repressor BER92_RS17740 SM01134 BER92_RS17740 BER92_RS17790 SM00563 Phosphate acyltransferases BER92_RS17900 SM00052 Putative diguanylate phosphodiesterase BER92_RS17900 SM00267 diguanylate cyclase BER92_RS17900 SM00448 cheY-homologous receiver domain BER92_RS17905 SM00387 Histidine kinase-like ATPases BER92_RS17905 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS17905 SM00448 cheY-homologous receiver domain BER92_RS17960 SM00100 Cyclic nucleotide-monophosphate binding domain BER92_RS17960 SM00419 helix_turn_helix, cAMP Regulatory protein BER92_RS18035 SM01230 BER92_RS18035 BER92_RS18045 SM00046 Diacylglycerol kinase catalytic domain (presumed) BER92_RS18065 SM00271 DnaJ molecular chaperone homology domain BER92_RS18170 SM00644 BER92_RS18170 BER92_RS18180 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BER92_RS18215 SM01217 BER92_RS18215 BER92_RS18220 SM00905 Dihydroneopterin aldolase BER92_RS18245 SM00400 zinc finger BER92_RS18245 SM00493 BER92_RS18245 BER92_RS18245 SM00766 DNA primase DnaG DnaB-binding BER92_RS18320 SM00363 S4 RNA-binding domain BER92_RS18370 SM00470 ParB-like nuclease domain BER92_RS18395 SM01259 BER92_RS18395 BER92_RS18425 SM00836 DALR anticodon binding domain BER92_RS18425 SM01016 Arginyl tRNA synthetase N terminal dom BER92_RS18470 SM00823 Phosphopantetheine attachment site BER92_RS18470 SM00824 Thioesterase BER92_RS18480 SM00387 Histidine kinase-like ATPases BER92_RS18480 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS18485 SM00448 cheY-homologous receiver domain BER92_RS18485 SM00862 Transcriptional regulatory protein, C terminal BER92_RS18510 SM00248 ankyrin repeats BER92_RS18515 SM01060 BER92_RS18515 BER92_RS18520 SM00491 BER92_RS18520 BER92_RS18545 SM01004 Delta-aminolevulinic acid dehydratase BER92_RS18590 SM01230 BER92_RS18590 BER92_RS18595 SM00938 Nitrogen regulatory protein P-II BER92_RS18605 SM00387 Histidine kinase-like ATPases BER92_RS18605 SM00388 His Kinase A (phosphoacceptor) domain BER92_RS18610 SM00382 ATPases associated with a variety of cellular activities BER92_RS18610 SM00448 cheY-homologous receiver domain BER92_RS18635 SM00028 Tetratricopeptide repeats BER92_RS18650 SM00563 Phosphate acyltransferases BER92_RS18660 SM00155 Phospholipase D. Active site motifs. BER92_RS18665 SM00867 YceI-like domain BER92_RS18670 SM00855 Phosphoglycerate mutase family BER92_RS18725 SM00382 ATPases associated with a variety of cellular activities BER92_RS18735 SM00382 ATPases associated with a variety of cellular activities BER92_RS18740 SM00344 helix_turn_helix ASNC type BER92_RS18765 SM00354 helix_turn _helix lactose operon repressor BER92_RS18805 SM00642 Alpha-amylase domain BER92_RS18810 SM00642 Alpha-amylase domain BER92_RS18815 SM00642 Alpha-amylase domain BER92_RS18900 SM00829 Enoylreductase BER92_RS18925 SM00836 DALR anticodon binding domain BER92_RS18935 SM00382 ATPases associated with a variety of cellular activities BER92_RS18995 SM00354 helix_turn _helix lactose operon repressor BER92_RS19175 SM00530 Helix-turn-helix XRE-family like proteins BER92_RS19200 SM00382 ATPases associated with a variety of cellular activities BER92_RS19265 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BER92_RS19265 SM00091 PAS domain BER92_RS19265 SM00267 diguanylate cyclase BER92_RS19505 SM00382 ATPases associated with a variety of cellular activities BER92_RS19505 SM00760 Bacterial dnaA protein helix-turn-helix domain