BER93_RS00005	SSF48295	TrpR-like
BER93_RS00005	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS00010	SSF55979	DNA clamp
BER93_RS00020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS00025	SSF54211	Ribosomal protein S5 domain 2-like
BER93_RS00025	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS00025	SSF56719	Type II DNA topoisomerase
BER93_RS00040	SSF48452	TPR-like
BER93_RS00045	SSF74653	TolA/TonB C-terminal domain
BER93_RS00075	SSF63892	Pyridoxine 5'-phosphate synthase
BER93_RS00085	SSF56024	Phospholipase D/nuclease
BER93_RS00100	SSF56935	Porins
BER93_RS00105	SSF144091	Rhomboid-like
BER93_RS00115	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS00115	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
BER93_RS00120	SSF50156	PDZ domain-like
BER93_RS00120	SSF52096	ClpP/crotonase
BER93_RS00125	SSF51261	Duplicated hybrid motif
BER93_RS00130	SSF52025	PA domain
BER93_RS00130	SSF53187	Zn-dependent exopeptidases
BER93_RS00145	SSF55103	FAD-linked oxidases, C-terminal domain
BER93_RS00145	SSF56176	FAD-binding/transporter-associated domain-like
BER93_RS00160	SSF53098	Ribonuclease H-like
BER93_RS00165	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS00175	SSF52096	ClpP/crotonase
BER93_RS00200	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS00215	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
BER93_RS00215	SSF88946	Sigma2 domain of RNA polymerase sigma factors
BER93_RS00220	SSF52141	Uracil-DNA glycosylase-like
BER93_RS00225	SSF52172	CheY-like
BER93_RS00235	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS00240	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS00245	SSF52833	Thioredoxin-like
BER93_RS00250	SSF50249	Nucleic acid-binding proteins
BER93_RS00250	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS00250	SSF68912	Rho N-terminal domain-like
BER93_RS00255	SSF53098	Ribonuclease H-like
BER93_RS00260	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
BER93_RS00280	SSF54106	LysM domain
BER93_RS00285	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
BER93_RS00295	SSF111369	HlyD-like secretion proteins
BER93_RS00300	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
BER93_RS00300	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
BER93_RS00300	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER93_RS00305	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
BER93_RS00305	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
BER93_RS00305	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER93_RS00335	SSF74650	Galactose mutarotase-like
BER93_RS00335	SSF81296	E set domains
BER93_RS00340	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS00340	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
BER93_RS00345	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS00375	SSF46785	"Winged helix" DNA-binding domain
BER93_RS00380	SSF56784	HAD-like
BER93_RS00400	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
BER93_RS00405	SSF50129	GroES-like
BER93_RS00405	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS00415	SSF53098	Ribonuclease H-like
BER93_RS00455	SSF53098	Ribonuclease H-like
BER93_RS00460	SSF46689	Homeodomain-like
BER93_RS00465	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS00470	SSF51905	FAD/NAD(P)-binding domain
BER93_RS00500	SSF46785	"Winged helix" DNA-binding domain
BER93_RS00510	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS00515	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
BER93_RS00515	SSF51230	Single hybrid motif
BER93_RS00515	SSF52777	CoA-dependent acyltransferases
BER93_RS00520	SSF50044	SH3-domain
BER93_RS00525	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
BER93_RS00525	SSF52922	TK C-terminal domain-like
BER93_RS00530	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
BER93_RS00535	SSF140959	Indolic compounds 2,3-dioxygenase-like
BER93_RS00540	SSF103473	MFS general substrate transporter
BER93_RS00545	SSF52833	Thioredoxin-like
BER93_RS00555	SSF46785	"Winged helix" DNA-binding domain
BER93_RS00560	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
BER93_RS00565	SSF51182	RmlC-like cupins
BER93_RS00590	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER93_RS00590	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS00605	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS00610	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
BER93_RS00610	SSF63380	Riboflavin synthase domain-like
BER93_RS00620	SSF53474	alpha/beta-Hydrolases
BER93_RS00625	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS00635	SSF74653	TolA/TonB C-terminal domain
BER93_RS00645	SSF56935	Porins
BER93_RS00650	SSF47616	GST C-terminal domain-like
BER93_RS00650	SSF52833	Thioredoxin-like
BER93_RS00655	SSF53098	Ribonuclease H-like
BER93_RS00710	SSF69255	gp5 N-terminal domain-like
BER93_RS00710	SSF69279	Phage tail proteins
BER93_RS00725	SSF69255	gp5 N-terminal domain-like
BER93_RS00725	SSF69279	Phage tail proteins
BER93_RS00740	SSF69255	gp5 N-terminal domain-like
BER93_RS00740	SSF69279	Phage tail proteins
BER93_RS00745	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS00750	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS00850	SSF160719	gpW/gp25-like
BER93_RS00915	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
BER93_RS00915	SSF88946	Sigma2 domain of RNA polymerase sigma factors
BER93_RS00920	SSF69500	DTD-like
BER93_RS00930	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER93_RS00935	SSF142695	RibA-like
BER93_RS00950	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER93_RS00955	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS00970	SSF48013	NusB-like
BER93_RS00970	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS00975	SSF50486	FMT C-terminal domain-like
BER93_RS00975	SSF53328	Formyltransferase
BER93_RS00980	SSF56420	Peptide deformylase
BER93_RS00985	SSF54106	LysM domain
BER93_RS00990	SSF102405	MCP/YpsA-like
BER93_RS01010	SSF56712	Prokaryotic type I DNA topoisomerase
BER93_RS01015	SSF55821	YrdC/RibB
BER93_RS01040	SSF56935	Porins
BER93_RS01065	SSF50998	Quinoprotein alcohol dehydrogenase-like
BER93_RS01070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS01075	SSF103473	MFS general substrate transporter
BER93_RS01085	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS01085	SSF52172	CheY-like
BER93_RS01085	SSF55785	PYP-like sensor domain (PAS domain)
BER93_RS01085	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS01095	SSF46785	"Winged helix" DNA-binding domain
BER93_RS01095	SSF55781	GAF domain-like
BER93_RS01100	SSF103473	MFS general substrate transporter
BER93_RS01105	SSF54909	Dimeric alpha+beta barrel
BER93_RS01110	SSF51604	Enolase C-terminal domain-like
BER93_RS01110	SSF54826	Enolase N-terminal domain-like
BER93_RS01115	SSF56529	FAH
BER93_RS01120	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS01125	SSF51556	Metallo-dependent hydrolases
BER93_RS01130	SSF51430	NAD(P)-linked oxidoreductase
BER93_RS01135	SSF46894	C-terminal effector domain of the bipartite response regulators
BER93_RS01135	SSF52172	CheY-like
BER93_RS01140	SSF56801	Acetyl-CoA synthetase-like
BER93_RS01145	SSF56935	Porins
BER93_RS01160	SSF56219	DNase I-like
BER93_RS01165	SSF51316	Mss4-like
BER93_RS01175	SSF56214	4'-phosphopantetheinyl transferase
BER93_RS01185	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS01190	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER93_RS01200	SSF143800	L28p-like
BER93_RS01205	SSF57829	Zn-binding ribosomal proteins
BER93_RS01210	SSF56024	Phospholipase D/nuclease
BER93_RS01215	SSF51905	FAD/NAD(P)-binding domain
BER93_RS01220	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS01250	SSF46785	"Winged helix" DNA-binding domain
BER93_RS01250	SSF50037	C-terminal domain of transcriptional repressors
BER93_RS01250	SSF55681	Class II aaRS and biotin synthetases
BER93_RS01255	SSF53067	Actin-like ATPase domain
BER93_RS01260	SSF110997	Sporulation related repeat
BER93_RS01275	SSF53098	Ribonuclease H-like
BER93_RS01280	SSF46689	Homeodomain-like
BER93_RS01310	SSF53474	alpha/beta-Hydrolases
BER93_RS01325	SSF160113	YegP-like
BER93_RS01325	SSF52374	Nucleotidylyl transferase
BER93_RS01340	SSF52768	Arginase/deacetylase
BER93_RS01365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS01375	SSF81342	Transmembrane di-heme cytochromes
BER93_RS01380	SSF56634	Heme-dependent catalase-like
BER93_RS01385	SSF53187	Zn-dependent exopeptidases
BER93_RS01390	SSF56784	HAD-like
BER93_RS01415	SSF50156	PDZ domain-like
BER93_RS01415	SSF50494	Trypsin-like serine proteases
BER93_RS01420	SSF58113	Apolipoprotein A-I
BER93_RS01435	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS01435	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS01440	SSF46894	C-terminal effector domain of the bipartite response regulators
BER93_RS01440	SSF52172	CheY-like
BER93_RS01475	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS01530	SSF103365	Hypothetical protein PH1602
BER93_RS01535	SSF46689	Homeodomain-like
BER93_RS01540	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
BER93_RS01540	SSF54292	2Fe-2S ferredoxin-like
BER93_RS01540	SSF63380	Riboflavin synthase domain-like
BER93_RS01550	SSF141868	EAL domain-like
BER93_RS01555	SSF50814	Lipocalins
BER93_RS01565	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS01565	SSF54211	Ribosomal protein S5 domain 2-like
BER93_RS01575	SSF54913	GlnB-like
BER93_RS01580	SSF51445	(Trans)glycosidases
BER93_RS01580	SSF55545	beta-N-acetylhexosaminidase-like domain
BER93_RS01600	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS01605	SSF50621	Alanine racemase C-terminal domain-like
BER93_RS01605	SSF51419	PLP-binding barrel
BER93_RS01630	SSF47807	5' to 3' exonuclease, C-terminal subdomain
BER93_RS01630	SSF53098	Ribonuclease H-like
BER93_RS01630	SSF56672	DNA/RNA polymerases
BER93_RS01630	SSF88723	PIN domain-like
BER93_RS01635	SSF102886	Coproporphyrinogen III oxidase
BER93_RS01655	SSF53474	alpha/beta-Hydrolases
BER93_RS01655	SSF82171	DPP6 N-terminal domain-like
BER93_RS01660	SSF56801	Acetyl-CoA synthetase-like
BER93_RS01665	SSF55298	YjgF-like
BER93_RS01670	SSF51905	FAD/NAD(P)-binding domain
BER93_RS01675	SSF47336	ACP-like
BER93_RS01685	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
BER93_RS01690	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
BER93_RS01705	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER93_RS01710	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
BER93_RS01720	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS01725	SSF51905	FAD/NAD(P)-binding domain
BER93_RS01730	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS01735	SSF53901	Thiolase-like
BER93_RS01740	SSF53901	Thiolase-like
BER93_RS01745	SSF160191	YcgL-like
BER93_RS01750	SSF48403	Ankyrin repeat
BER93_RS01755	SSF52788	Phosphotyrosine protein phosphatases I
BER93_RS01760	SSF48208	Six-hairpin glycosidases
BER93_RS01765	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS01765	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER93_RS01770	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS01775	SSF51069	Carbonic anhydrase
BER93_RS01780	SSF158791	MgtE N-terminal domain-like
BER93_RS01780	SSF161093	MgtE membrane domain-like
BER93_RS01780	SSF54631	CBS-domain pair
BER93_RS01785	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS01785	SSF52210	Succinyl-CoA synthetase domains
BER93_RS01785	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER93_RS01785	SSF56059	Glutathione synthetase ATP-binding domain-like
BER93_RS01795	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
BER93_RS01795	SSF51998	PFL-like glycyl radical enzymes
BER93_RS01800	SSF47240	Ferritin-like
BER93_RS01805	SSF52218	Flavoproteins
BER93_RS01810	SSF52833	Thioredoxin-like
BER93_RS01825	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS01830	SSF53098	Ribonuclease H-like
BER93_RS01835	SSF51695	PLC-like phosphodiesterases
BER93_RS01840	SSF56935	Porins
BER93_RS01845	SSF55144	LigT-like
BER93_RS01860	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
BER93_RS01860	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
BER93_RS01860	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER93_RS01865	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
BER93_RS01865	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER93_RS01875	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
BER93_RS01880	SSF111369	HlyD-like secretion proteins
BER93_RS01885	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS01925	SSF53098	Ribonuclease H-like
BER93_RS01935	SSF46689	Homeodomain-like
BER93_RS01960	SSF51395	FMN-linked oxidoreductases
BER93_RS01975	SSF53383	PLP-dependent transferases
BER93_RS01980	SSF56655	Carbohydrate phosphatase
BER93_RS01985	SSF51126	Pectin lyase-like
BER93_RS01990	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS02010	SSF55811	Nudix
BER93_RS02015	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS02020	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER93_RS02050	SSF53901	Thiolase-like
BER93_RS02055	SSF48452	TPR-like
BER93_RS02065	SSF69618	HemD-like
BER93_RS02070	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
BER93_RS02080	SSF52821	Rhodanese/Cell cycle control phosphatase
BER93_RS02085	SSF54611	SecB-like
BER93_RS02090	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER93_RS02090	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS02095	SSF56935	Porins
BER93_RS02100	SSF52467	DHS-like NAD/FAD-binding domain
BER93_RS02100	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
BER93_RS02110	SSF75217	alpha/beta knot
BER93_RS02120	SSF53901	Thiolase-like
BER93_RS02130	SSF46689	Homeodomain-like
BER93_RS02135	SSF53098	Ribonuclease H-like
BER93_RS02150	SSF55315	L30e-like
BER93_RS02150	SSF75217	alpha/beta knot
BER93_RS02160	SSF51569	Aldolase
BER93_RS02165	SSF50182	Sm-like ribonucleoproteins
BER93_RS02180	SSF50447	Translation proteins
BER93_RS02180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS02180	SSF54980	EF-G C-terminal domain-like
BER93_RS02185	SSF50891	Cyclophilin-like
BER93_RS02190	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS02190	SSF56327	LDH C-terminal domain-like
BER93_RS02205	SSF47616	GST C-terminal domain-like
BER93_RS02225	SSF51395	FMN-linked oxidoreductases
BER93_RS02225	SSF51905	FAD/NAD(P)-binding domain
BER93_RS02225	SSF51971	Nucleotide-binding domain
BER93_RS02230	SSF50129	GroES-like
BER93_RS02230	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS02235	SSF103088	OmpA-like
BER93_RS02235	SSF103647	TSP type-3 repeat
BER93_RS02235	SSF56925	OMPA-like
BER93_RS02245	SSF55120	Pseudouridine synthase
BER93_RS02245	SSF55174	Alpha-L RNA-binding motif
BER93_RS02255	SSF53383	PLP-dependent transferases
BER93_RS02260	SSF53850	Periplasmic binding protein-like II
BER93_RS02265	SSF161098	MetI-like
BER93_RS02270	SSF161098	MetI-like
BER93_RS02275	SSF50331	MOP-like
BER93_RS02275	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS02285	SSF50129	GroES-like
BER93_RS02285	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS02290	SSF56935	Porins
BER93_RS02295	SSF53649	Alkaline phosphatase-like
BER93_RS02300	SSF53254	Phosphoglycerate mutase-like
BER93_RS02315	SSF81273	H-NS histone-like proteins
BER93_RS02320	SSF51011	Glycosyl hydrolase domain
BER93_RS02320	SSF51445	(Trans)glycosidases
BER93_RS02320	SSF81296	E set domains
BER93_RS02335	SSF56059	Glutathione synthetase ATP-binding domain-like
BER93_RS02345	SSF52172	CheY-like
BER93_RS02350	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS02350	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS02370	SSF63380	Riboflavin synthase domain-like
BER93_RS02375	SSF142695	RibA-like
BER93_RS02375	SSF55821	YrdC/RibB
BER93_RS02380	SSF52121	Lumazine synthase
BER93_RS02385	SSF48013	NusB-like
BER93_RS02390	SSF55326	PurM N-terminal domain-like
BER93_RS02390	SSF56042	PurM C-terminal domain-like
BER93_RS02410	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER93_RS02425	SSF55931	Glutamine synthetase/guanido kinase
BER93_RS02430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS02435	SSF46626	Cytochrome c
BER93_RS02440	SSF52833	Thioredoxin-like
BER93_RS02445	SSF52833	Thioredoxin-like
BER93_RS02450	SSF56219	DNase I-like
BER93_RS02455	SSF50129	GroES-like
BER93_RS02455	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS02460	SSF48371	ARM repeat
BER93_RS02480	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS02490	SSF53474	alpha/beta-Hydrolases
BER93_RS02490	SSF82171	DPP6 N-terminal domain-like
BER93_RS02500	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS02525	SSF143865	CorA soluble domain-like
BER93_RS02525	SSF144083	Magnesium transport protein CorA, transmembrane region
BER93_RS02540	SSF51219	TRAP-like
BER93_RS02545	SSF48208	Six-hairpin glycosidases
BER93_RS02565	SSF63411	LuxS/MPP-like metallohydrolase
BER93_RS02570	SSF55073	Nucleotide cyclase
BER93_RS02570	SSF55781	GAF domain-like
BER93_RS02570	SSF55785	PYP-like sensor domain (PAS domain)
BER93_RS02585	SSF49384	Carbohydrate-binding domain
BER93_RS02585	SSF51445	(Trans)glycosidases
BER93_RS02590	SSF52091	SpoIIaa-like
BER93_RS02600	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS02605	SSF53474	alpha/beta-Hydrolases
BER93_RS02615	SSF52172	CheY-like
BER93_RS02620	SSF53850	Periplasmic binding protein-like II
BER93_RS02620	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
BER93_RS02630	SSF46785	"Winged helix" DNA-binding domain
BER93_RS02635	SSF50814	Lipocalins
BER93_RS02645	SSF50993	Peptidase/esterase 'gauge' domain
BER93_RS02645	SSF53474	alpha/beta-Hydrolases
BER93_RS02655	SSF53383	PLP-dependent transferases
BER93_RS02660	SSF50993	Peptidase/esterase 'gauge' domain
BER93_RS02660	SSF53474	alpha/beta-Hydrolases
BER93_RS02670	SSF54506	Diaminopimelate epimerase-like
BER93_RS02680	SSF56349	DNA breaking-rejoining enzymes
BER93_RS02685	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
BER93_RS02690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS02700	SSF53927	Cytidine deaminase-like
BER93_RS02715	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS02720	SSF55073	Nucleotide cyclase
BER93_RS02725	SSF48371	ARM repeat
BER93_RS02725	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER93_RS02725	SSF63737	Leukotriene A4 hydrolase N-terminal domain
BER93_RS02735	SSF56784	HAD-like
BER93_RS02740	SSF53613	Ribokinase-like
BER93_RS02745	SSF53067	Actin-like ATPase domain
BER93_RS02760	SSF56519	Penicillin binding protein dimerisation domain
BER93_RS02760	SSF56601	beta-lactamase/transpeptidase-like
BER93_RS02770	SSF51126	Pectin lyase-like
BER93_RS02775	SSF53955	Lysozyme-like
BER93_RS02780	SSF110997	Sporulation related repeat
BER93_RS02780	SSF50685	Barwin-like endoglucanases
BER93_RS02785	SSF56601	beta-lactamase/transpeptidase-like
BER93_RS02785	SSF69189	Penicillin-binding protein associated domain
BER93_RS02795	SSF117991	YbeD/HP0495-like
BER93_RS02800	SSF55681	Class II aaRS and biotin synthetases
BER93_RS02805	SSF102114	Radical SAM enzymes
BER93_RS02830	SSF50156	PDZ domain-like
BER93_RS02830	SSF52096	ClpP/crotonase
BER93_RS02840	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
BER93_RS02875	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER93_RS02875	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS02880	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS02880	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER93_RS02890	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS02890	SSF55785	PYP-like sensor domain (PAS domain)
BER93_RS02890	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS02895	SSF52172	CheY-like
BER93_RS02900	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS02900	SSF52172	CheY-like
BER93_RS02900	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS02905	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
BER93_RS02910	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS02915	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS02935	SSF53098	Ribonuclease H-like
BER93_RS02940	SSF46689	Homeodomain-like
BER93_RS02950	SSF46689	Homeodomain-like
BER93_RS02955	SSF46785	"Winged helix" DNA-binding domain
BER93_RS02955	SSF64288	Chorismate lyase-like
BER93_RS02960	SSF103473	MFS general substrate transporter
BER93_RS02965	SSF47413	lambda repressor-like DNA-binding domains
BER93_RS02965	SSF53822	Periplasmic binding protein-like I
BER93_RS02970	SSF53697	SIS domain
BER93_RS02975	SSF51338	Composite domain of metallo-dependent hydrolases
BER93_RS02975	SSF51556	Metallo-dependent hydrolases
BER93_RS02990	SSF50129	GroES-like
BER93_RS02990	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS03000	SSF53474	alpha/beta-Hydrolases
BER93_RS03015	SSF49899	Concanavalin A-like lectins/glucanases
BER93_RS03025	SSF51338	Composite domain of metallo-dependent hydrolases
BER93_RS03030	SSF48452	TPR-like
BER93_RS03070	SSF46689	Homeodomain-like
BER93_RS03080	SSF52821	Rhodanese/Cell cycle control phosphatase
BER93_RS03080	SSF52833	Thioredoxin-like
BER93_RS03080	SSF89360	HesB-like domain
BER93_RS03085	SSF88713	Glycoside hydrolase/deacetylase
BER93_RS03090	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS03095	SSF52266	SGNH hydrolase
BER93_RS03100	SSF53383	PLP-dependent transferases
BER93_RS03105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS03105	SSF90123	ABC transporter transmembrane region
BER93_RS03120	SSF51120	beta-Roll
BER93_RS03130	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS03140	SSF51011	Glycosyl hydrolase domain
BER93_RS03140	SSF51445	(Trans)glycosidases
BER93_RS03145	SSF56935	Porins
BER93_RS03150	SSF103473	MFS general substrate transporter
BER93_RS03155	SSF47413	lambda repressor-like DNA-binding domains
BER93_RS03155	SSF53822	Periplasmic binding protein-like I
BER93_RS03160	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS03170	SSF56935	Porins
BER93_RS03175	SSF52172	CheY-like
BER93_RS03180	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS03180	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS03185	SSF53850	Periplasmic binding protein-like II
BER93_RS03190	SSF46894	C-terminal effector domain of the bipartite response regulators
BER93_RS03190	SSF52172	CheY-like
BER93_RS03195	SSF54001	Cysteine proteinases
BER93_RS03200	SSF46689	Homeodomain-like
BER93_RS03215	SSF46689	Homeodomain-like
BER93_RS03225	SSF103190	Sensory domain-like
BER93_RS03225	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS03225	SSF52172	CheY-like
BER93_RS03225	SSF55785	PYP-like sensor domain (PAS domain)
BER93_RS03225	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS03230	SSF56935	Porins
BER93_RS03235	SSF118215	Proton glutamate symport protein
BER93_RS03240	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS03240	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
BER93_RS03240	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
BER93_RS03255	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER93_RS03270	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER93_RS03275	SSF56954	Outer membrane efflux proteins (OEP)
BER93_RS03280	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS03285	SSF46689	Homeodomain-like
BER93_RS03285	SSF48498	Tetracyclin repressor-like, C-terminal domain
BER93_RS03290	SSF46785	"Winged helix" DNA-binding domain
BER93_RS03295	SSF53732	Aconitase iron-sulfur domain
BER93_RS03300	SSF52016	LeuD/IlvD-like
BER93_RS03305	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
BER93_RS03310	SSF56935	Porins
BER93_RS03320	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
BER93_RS03320	SSF51569	Aldolase
BER93_RS03325	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
BER93_RS03335	SSF52467	DHS-like NAD/FAD-binding domain
BER93_RS03335	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
BER93_RS03340	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER93_RS03340	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS03365	SSF46894	C-terminal effector domain of the bipartite response regulators
BER93_RS03375	SSF46689	Homeodomain-like
BER93_RS03380	SSF56935	Porins
BER93_RS03385	SSF109604	HD-domain/PDEase-like
BER93_RS03385	SSF52172	CheY-like
BER93_RS03390	SSF50324	Inorganic pyrophosphatase
BER93_RS03420	SSF53784	Phosphofructokinase
BER93_RS03425	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS03430	SSF51984	MurCD N-terminal domain
BER93_RS03430	SSF53244	MurD-like peptide ligases, peptide-binding domain
BER93_RS03430	SSF53623	MurD-like peptide ligases, catalytic domain
BER93_RS03435	SSF88697	PUA domain-like
BER93_RS03445	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
BER93_RS03450	SSF56112	Protein kinase-like (PK-like)
BER93_RS03455	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS03475	SSF53383	PLP-dependent transferases
BER93_RS03480	SSF53383	PLP-dependent transferases
BER93_RS03485	SSF51391	Thiamin phosphate synthase
BER93_RS03490	SSF57802	Rubredoxin-like
BER93_RS03495	SSF48452	TPR-like
BER93_RS03505	SSF100950	NagB/RpiA/CoA transferase-like
BER93_RS03505	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
BER93_RS03510	SSF88697	PUA domain-like
BER93_RS03515	SSF100950	NagB/RpiA/CoA transferase-like
BER93_RS03525	SSF102829	Cell division protein ZapA-like
BER93_RS03535	SSF101327	YgfB-like
BER93_RS03540	SSF53092	Creatinase/prolidase N-terminal domain
BER93_RS03540	SSF55920	Creatinase/aminopeptidase
BER93_RS03545	SSF55920	Creatinase/aminopeptidase
BER93_RS03560	SSF102114	Radical SAM enzymes
BER93_RS03565	SSF52972	ITPase-like
BER93_RS03570	SSF54211	Ribosomal protein S5 domain 2-like
BER93_RS03570	SSF55666	Ribonuclease PH domain 2-like
BER93_RS03580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS03585	SSF63562	RPB6/omega subunit-like
BER93_RS03590	SSF109604	HD-domain/PDEase-like
BER93_RS03590	SSF55021	ACT-like
BER93_RS03590	SSF81271	TGS-like
BER93_RS03590	SSF81301	Nucleotidyltransferase
BER93_RS03595	SSF55298	YjgF-like
BER93_RS03600	SSF50249	Nucleic acid-binding proteins
BER93_RS03600	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS03610	SSF53590	Nucleoside hydrolase
BER93_RS03615	SSF143800	L28p-like
BER93_RS03620	SSF48256	Citrate synthase
BER93_RS03630	SSF53955	Lysozyme-like
BER93_RS03630	SSF56601	beta-lactamase/transpeptidase-like
BER93_RS03635	SSF53067	Actin-like ATPase domain
BER93_RS03695	SSF52980	Restriction endonuclease-like
BER93_RS03700	SSF53822	Periplasmic binding protein-like I
BER93_RS03705	SSF53790	Tetrapyrrole methylase
BER93_RS03720	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
BER93_RS03735	SSF89447	AbrB/MazE/MraZ-like
BER93_RS03740	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS03740	SSF81799	Putative methyltransferase TM0872, insert domain
BER93_RS03750	SSF56519	Penicillin binding protein dimerisation domain
BER93_RS03750	SSF56601	beta-lactamase/transpeptidase-like
BER93_RS03755	SSF53244	MurD-like peptide ligases, peptide-binding domain
BER93_RS03755	SSF53623	MurD-like peptide ligases, catalytic domain
BER93_RS03755	SSF63418	MurE/MurF N-terminal domain
BER93_RS03760	SSF53244	MurD-like peptide ligases, peptide-binding domain
BER93_RS03760	SSF53623	MurD-like peptide ligases, catalytic domain
BER93_RS03760	SSF63418	MurE/MurF N-terminal domain
BER93_RS03775	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER93_RS03780	SSF51984	MurCD N-terminal domain
BER93_RS03780	SSF53244	MurD-like peptide ligases, peptide-binding domain
BER93_RS03780	SSF53623	MurD-like peptide ligases, catalytic domain
BER93_RS03785	SSF52440	PreATP-grasp domain
BER93_RS03785	SSF56059	Glutathione synthetase ATP-binding domain-like
BER93_RS03795	SSF53067	Actin-like ATPase domain
BER93_RS03800	SSF52490	Tubulin nucleotide-binding domain-like
BER93_RS03800	SSF55307	Tubulin C-terminal domain-like
BER93_RS03805	SSF54211	Ribosomal protein S5 domain 2-like
BER93_RS03815	SSF51261	Duplicated hybrid motif
BER93_RS03820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS03820	SSF81767	Pre-protein crosslinking domain of SecA
BER93_RS03820	SSF81886	Helical scaffold and wing domains of SecA
BER93_RS03830	SSF51391	Thiamin phosphate synthase
BER93_RS03830	SSF55811	Nudix
BER93_RS03840	SSF51730	FAD-linked oxidoreductase
BER93_RS03850	SSF50129	GroES-like
BER93_RS03850	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS03860	SSF54001	Cysteine proteinases
BER93_RS03875	SSF46689	Homeodomain-like
BER93_RS03885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS03900	SSF54523	Pili subunits
BER93_RS03905	SSF160246	EspE N-terminal domain-like
BER93_RS03905	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS03920	SSF140931	Fic-like
BER93_RS03925	SSF46689	Homeodomain-like
BER93_RS03925	SSF52172	CheY-like
BER93_RS03925	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS03930	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS03930	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS03935	SSF52210	Succinyl-CoA synthetase domains
BER93_RS03935	SSF56059	Glutathione synthetase ATP-binding domain-like
BER93_RS03940	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS03940	SSF52210	Succinyl-CoA synthetase domains
BER93_RS03945	SSF52402	Adenine nucleotide alpha hydrolases-like
BER93_RS03945	SSF56317	Carbon-nitrogen hydrolase
BER93_RS03950	SSF48452	TPR-like
BER93_RS03955	SSF55120	Pseudouridine synthase
BER93_RS03955	SSF55174	Alpha-L RNA-binding motif
BER93_RS03960	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
BER93_RS03965	SSF50998	Quinoprotein alcohol dehydrogenase-like
BER93_RS03985	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER93_RS03990	SSF48208	Six-hairpin glycosidases
BER93_RS03995	SSF56784	HAD-like
BER93_RS04000	SSF56935	Porins
BER93_RS04025	SSF47616	GST C-terminal domain-like
BER93_RS04025	SSF52833	Thioredoxin-like
BER93_RS04030	SSF82771	GIY-YIG endonuclease
BER93_RS04040	SSF46689	Homeodomain-like
BER93_RS04045	SSF56349	DNA breaking-rejoining enzymes
BER93_RS04055	SSF52402	Adenine nucleotide alpha hydrolases-like
BER93_RS04070	SSF55120	Pseudouridine synthase
BER93_RS04070	SSF55174	Alpha-L RNA-binding motif
BER93_RS04075	SSF52172	CheY-like
BER93_RS04085	SSF47819	HRDC-like
BER93_RS04085	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS04090	SSF47240	Ferritin-like
BER93_RS04095	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS04100	SSF102114	Radical SAM enzymes
BER93_RS04110	SSF48613	Heme oxygenase-like
BER93_RS04115	SSF56281	Metallo-hydrolase/oxidoreductase
BER93_RS04120	SSF109604	HD-domain/PDEase-like
BER93_RS04120	SSF55021	ACT-like
BER93_RS04120	SSF81271	TGS-like
BER93_RS04120	SSF81301	Nucleotidyltransferase
BER93_RS04125	SSF48452	TPR-like
BER93_RS04130	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS04130	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER93_RS04135	SSF53955	Lysozyme-like
BER93_RS04135	SSF56601	beta-lactamase/transpeptidase-like
BER93_RS04140	SSF48452	TPR-like
BER93_RS04145	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS04150	SSF53067	Actin-like ATPase domain
BER93_RS04155	SSF74653	TolA/TonB C-terminal domain
BER93_RS04160	SSF52440	PreATP-grasp domain
BER93_RS04160	SSF56059	Glutathione synthetase ATP-binding domain-like
BER93_RS04165	SSF52172	CheY-like
BER93_RS04170	SSF52172	CheY-like
BER93_RS04175	SSF50341	CheW-like
BER93_RS04180	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BER93_RS04185	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
BER93_RS04185	SSF50341	CheW-like
BER93_RS04185	SSF52172	CheY-like
BER93_RS04185	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS04190	SSF52738	Methylesterase CheB, C-terminal domain
BER93_RS04200	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER93_RS04215	SSF110395	CutC-like
BER93_RS04220	SSF52058	L domain-like
BER93_RS04235	SSF49785	Galactose-binding domain-like
BER93_RS04235	SSF51445	(Trans)glycosidases
BER93_RS04240	SSF53098	Ribonuclease H-like
BER93_RS04245	SSF69255	gp5 N-terminal domain-like
BER93_RS04245	SSF69279	Phage tail proteins
BER93_RS04245	SSF69349	Phage fibre proteins
BER93_RS04275	SSF160631	SMI1/KNR4-like
BER93_RS04280	SSF46689	Homeodomain-like
BER93_RS04285	SSF53098	Ribonuclease H-like
BER93_RS04290	SSF46589	tRNA-binding arm
BER93_RS04290	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
BER93_RS04290	SSF50677	ValRS/IleRS/LeuRS editing domain
BER93_RS04290	SSF52374	Nucleotidylyl transferase
BER93_RS04295	SSF102400	DNA polymerase III chi subunit
BER93_RS04300	SSF52949	Macro domain-like
BER93_RS04300	SSF53187	Zn-dependent exopeptidases
BER93_RS04325	SSF47823	lambda integrase-like, N-terminal domain
BER93_RS04325	SSF56349	DNA breaking-rejoining enzymes
BER93_RS04330	SSF52833	Thioredoxin-like
BER93_RS04330	SSF54423	DsbC/DsbG N-terminal domain-like
BER93_RS04335	SSF109736	FGAM synthase PurL, linker domain
BER93_RS04335	SSF52317	Class I glutamine amidotransferase-like
BER93_RS04335	SSF55326	PurM N-terminal domain-like
BER93_RS04335	SSF56042	PurM C-terminal domain-like
BER93_RS04335	SSF82697	PurS-like
BER93_RS04345	SSF101967	Adhesin YadA, collagen-binding domain
BER93_RS04345	SSF54523	Pili subunits
BER93_RS04350	SSF52743	Subtilisin-like
BER93_RS04355	SSF160246	EspE N-terminal domain-like
BER93_RS04355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS04365	SSF54523	Pili subunits
BER93_RS04370	SSF54523	Pili subunits
BER93_RS04385	SSF158544	GspK insert domain-like
BER93_RS04390	SSF53067	Actin-like ATPase domain
BER93_RS04410	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS04415	SSF46785	"Winged helix" DNA-binding domain
BER93_RS04415	SSF64288	Chorismate lyase-like
BER93_RS04425	SSF56935	Porins
BER93_RS04430	SSF56112	Protein kinase-like (PK-like)
BER93_RS04435	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS04445	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
BER93_RS04450	SSF52025	PA domain
BER93_RS04465	SSF56420	Peptide deformylase
BER93_RS04470	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS04480	SSF53383	PLP-dependent transferases
BER93_RS04490	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER93_RS04495	SSF53597	Dihydrofolate reductase-like
BER93_RS04495	SSF53927	Cytidine deaminase-like
BER93_RS04520	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS04540	SSF56925	OMPA-like
BER93_RS04545	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS04550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS04555	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS04555	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
BER93_RS04565	SSF51621	Phosphoenolpyruvate/pyruvate domain
BER93_RS04570	SSF46689	Homeodomain-like
BER93_RS04570	SSF48498	Tetracyclin repressor-like, C-terminal domain
BER93_RS04585	SSF55973	S-adenosylmethionine synthetase
BER93_RS04595	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS04600	SSF51395	FMN-linked oxidoreductases
BER93_RS04610	SSF140478	LemA-like
BER93_RS04625	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS04625	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS04630	SSF46894	C-terminal effector domain of the bipartite response regulators
BER93_RS04630	SSF52172	CheY-like
BER93_RS04635	SSF52266	SGNH hydrolase
BER93_RS04640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS04680	SSF51430	NAD(P)-linked oxidoreductase
BER93_RS04690	SSF53613	Ribokinase-like
BER93_RS04710	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
BER93_RS04720	SSF53597	Dihydrofolate reductase-like
BER93_RS04725	SSF56300	Metallo-dependent phosphatases
BER93_RS04730	SSF110069	ApaG-like
BER93_RS04735	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS04740	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
BER93_RS04745	SSF109998	Triger factor/SurA peptide-binding domain-like
BER93_RS04745	SSF54534	FKBP-like
BER93_RS04755	SSF52768	Arginase/deacetylase
BER93_RS04760	SSF89028	Cobalamin adenosyltransferase-like
BER93_RS04770	SSF51905	FAD/NAD(P)-binding domain
BER93_RS04775	SSF51905	FAD/NAD(P)-binding domain
BER93_RS04790	SSF46785	"Winged helix" DNA-binding domain
BER93_RS04790	SSF53850	Periplasmic binding protein-like II
BER93_RS04810	SSF63829	Calcium-dependent phosphotriesterase
BER93_RS04815	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS04815	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER93_RS04820	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS04825	SSF53927	Cytidine deaminase-like
BER93_RS04835	SSF50715	Ribosomal protein L25-like
BER93_RS04835	SSF52374	Nucleotidylyl transferase
BER93_RS04840	SSF47616	GST C-terminal domain-like
BER93_RS04840	SSF52833	Thioredoxin-like
BER93_RS04850	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS04855	SSF46894	C-terminal effector domain of the bipartite response regulators
BER93_RS04855	SSF55781	GAF domain-like
BER93_RS04860	SSF55068	Peptide methionine sulfoxide reductase
BER93_RS04865	SSF51569	Aldolase
BER93_RS04870	SSF54534	FKBP-like
BER93_RS04875	SSF46785	"Winged helix" DNA-binding domain
BER93_RS04875	SSF53850	Periplasmic binding protein-like II
BER93_RS04880	SSF51905	FAD/NAD(P)-binding domain
BER93_RS04880	SSF52833	Thioredoxin-like
BER93_RS04885	SSF52833	Thioredoxin-like
BER93_RS04890	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS04895	SSF53474	alpha/beta-Hydrolases
BER93_RS04905	SSF53187	Zn-dependent exopeptidases
BER93_RS04910	SSF55811	Nudix
BER93_RS04915	SSF47807	5' to 3' exonuclease, C-terminal subdomain
BER93_RS04915	SSF88723	PIN domain-like
BER93_RS04920	SSF55469	FMN-dependent nitroreductase-like
BER93_RS04940	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
BER93_RS04940	SSF88946	Sigma2 domain of RNA polymerase sigma factors
BER93_RS04950	SSF117916	Fe-S cluster assembly (FSCA) domain-like
BER93_RS04955	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
BER93_RS04970	SSF52743	Subtilisin-like
BER93_RS04975	SSF55826	YbaK/ProRS associated domain
BER93_RS04980	SSF53774	Glutaminase/Asparaginase
BER93_RS04990	SSF52218	Flavoproteins
BER93_RS05000	SSF52833	Thioredoxin-like
BER93_RS05010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS05015	SSF53218	Molybdenum cofactor biosynthesis proteins
BER93_RS05020	SSF48452	TPR-like
BER93_RS05020	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER93_RS05025	SSF75620	Release factor
BER93_RS05030	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS05030	SSF69075	Glutamyl tRNA-reductase dimerization domain
BER93_RS05030	SSF69742	Glutamyl tRNA-reductase catalytic, N-terminal domain
BER93_RS05035	SSF48452	TPR-like
BER93_RS05040	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
BER93_RS05045	SSF54211	Ribosomal protein S5 domain 2-like
BER93_RS05045	SSF55060	GHMP Kinase, C-terminal domain
BER93_RS05055	SSF53271	PRTase-like
BER93_RS05060	SSF50715	Ribosomal protein L25-like
BER93_RS05065	SSF53178	Peptidyl-tRNA hydrolase-like
BER93_RS05070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS05070	SSF81271	TGS-like
BER93_RS05090	SSF50447	Translation proteins
BER93_RS05090	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
BER93_RS05090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS05105	SSF50104	Translation proteins SH3-like domain
BER93_RS05105	SSF82679	N-utilization substance G protein NusG, N-terminal domain
BER93_RS05110	SSF46906	Ribosomal protein L11, C-terminal domain
BER93_RS05110	SSF54747	Ribosomal L11/L12e N-terminal domain
BER93_RS05115	SSF56808	Ribosomal protein L1
BER93_RS05120	SSF160369	Ribosomal protein L10-like
BER93_RS05125	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
BER93_RS05125	SSF54736	ClpS-like
BER93_RS05130	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
BER93_RS05135	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
BER93_RS05140	SSF50249	Nucleic acid-binding proteins
BER93_RS05145	SSF47973	Ribosomal protein S7
BER93_RS05150	SSF50447	Translation proteins
BER93_RS05150	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS05150	SSF54211	Ribosomal protein S5 domain 2-like
BER93_RS05150	SSF54980	EF-G C-terminal domain-like
BER93_RS05155	SSF50447	Translation proteins
BER93_RS05155	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
BER93_RS05155	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS05160	SSF54999	Ribosomal protein S10
BER93_RS05165	SSF50447	Translation proteins
BER93_RS05170	SSF52166	Ribosomal protein L4
BER93_RS05175	SSF54189	Ribosomal proteins S24e, L23 and L15e
BER93_RS05180	SSF50104	Translation proteins SH3-like domain
BER93_RS05180	SSF50249	Nucleic acid-binding proteins
BER93_RS05185	SSF54570	Ribosomal protein S19
BER93_RS05190	SSF54843	Ribosomal protein L22
BER93_RS05195	SSF54814	Prokaryotic type KH domain (KH-domain type II)
BER93_RS05195	SSF54821	Ribosomal protein S3 C-terminal domain
BER93_RS05200	SSF54686	Ribosomal protein L16p/L10e
BER93_RS05205	SSF46561	Ribosomal protein L29 (L29p)
BER93_RS05210	SSF50249	Nucleic acid-binding proteins
BER93_RS05215	SSF50193	Ribosomal protein L14
BER93_RS05220	SSF50104	Translation proteins SH3-like domain
BER93_RS05225	SSF55282	RL5-like
BER93_RS05230	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
BER93_RS05235	SSF56047	Ribosomal protein S8
BER93_RS05240	SSF56053	Ribosomal protein L6
BER93_RS05245	SSF53137	Translational machinery components
BER93_RS05250	SSF54211	Ribosomal protein S5 domain 2-like
BER93_RS05250	SSF54768	dsRNA-binding domain-like
BER93_RS05255	SSF55129	Ribosomal protein L30p/L7e
BER93_RS05260	SSF52080	Ribosomal proteins L15p and L18e
BER93_RS05265	SSF103491	Preprotein translocase SecY subunit
BER93_RS05270	SSF46946	S13-like H2TH domain
BER93_RS05275	SSF53137	Translational machinery components
BER93_RS05280	SSF55174	Alpha-L RNA-binding motif
BER93_RS05285	SSF47789	C-terminal domain of RNA polymerase alpha subunit
BER93_RS05285	SSF55257	RBP11-like subunits of RNA polymerase
BER93_RS05285	SSF56553	Insert subdomain of RNA polymerase alpha subunit
BER93_RS05290	SSF64263	Prokaryotic ribosomal protein L17
BER93_RS05295	SSF158442	DsbB-like
BER93_RS05315	SSF53474	alpha/beta-Hydrolases
BER93_RS05325	SSF53474	alpha/beta-Hydrolases
BER93_RS05340	SSF81330	Gated mechanosensitive channel
BER93_RS05345	SSF56529	FAH
BER93_RS05355	SSF116726	TrkA C-terminal domain-like
BER93_RS05360	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS05365	SSF110399	ThiG-like
BER93_RS05370	SSF54285	MoaD/ThiS
BER93_RS05375	SSF103515	Autotransporter
BER93_RS05375	SSF52266	SGNH hydrolase
BER93_RS05385	SSF56349	DNA breaking-rejoining enzymes
BER93_RS05410	SSF47413	lambda repressor-like DNA-binding domains
BER93_RS05415	SSF53850	Periplasmic binding protein-like II
BER93_RS05430	SSF53098	Ribonuclease H-like
BER93_RS05435	SSF46689	Homeodomain-like
BER93_RS05445	SSF55073	Nucleotide cyclase
BER93_RS05445	SSF55785	PYP-like sensor domain (PAS domain)
BER93_RS05515	SSF47413	lambda repressor-like DNA-binding domains
BER93_RS05520	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS05535	SSF47090	PGBD-like
BER93_RS05545	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS05545	SSF90123	ABC transporter transmembrane region
BER93_RS05580	SSF103473	MFS general substrate transporter
BER93_RS05585	SSF46689	Homeodomain-like
BER93_RS05605	SSF53590	Nucleoside hydrolase
BER93_RS05615	SSF46689	Homeodomain-like
BER93_RS05620	SSF53254	Phosphoglycerate mutase-like
BER93_RS05625	SSF53613	Ribokinase-like
BER93_RS05645	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS05655	SSF51206	cAMP-binding domain-like
BER93_RS05655	SSF51905	FAD/NAD(P)-binding domain
BER93_RS05660	SSF141868	EAL domain-like
BER93_RS05665	SSF109604	HD-domain/PDEase-like
BER93_RS05675	SSF75217	alpha/beta knot
BER93_RS05675	SSF88697	PUA domain-like
BER93_RS05680	SSF53383	PLP-dependent transferases
BER93_RS05685	SSF55811	Nudix
BER93_RS05690	SSF56655	Carbohydrate phosphatase
BER93_RS05695	SSF101386	all-alpha NTP pyrophosphatases
BER93_RS05700	SSF101790	Aminomethyltransferase beta-barrel domain
BER93_RS05700	SSF103025	Folate-binding domain
BER93_RS05705	SSF51230	Single hybrid motif
BER93_RS05715	SSF56601	beta-lactamase/transpeptidase-like
BER93_RS05730	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
BER93_RS05730	SSF56645	Acyl-CoA dehydrogenase NM domain-like
BER93_RS05735	SSF53474	alpha/beta-Hydrolases
BER93_RS05740	SSF46689	Homeodomain-like
BER93_RS05740	SSF48498	Tetracyclin repressor-like, C-terminal domain
BER93_RS05760	SSF56784	HAD-like
BER93_RS05775	SSF46689	Homeodomain-like
BER93_RS05785	SSF118352	HSP33 redox switch-like
BER93_RS05785	SSF64397	Hsp33 domain
BER93_RS05790	SSF53955	Lysozyme-like
BER93_RS05795	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS05800	SSF54631	CBS-domain pair
BER93_RS05815	SSF50447	Translation proteins
BER93_RS05815	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS05815	SSF54980	EF-G C-terminal domain-like
BER93_RS05830	SSF53474	alpha/beta-Hydrolases
BER93_RS05835	SSF53383	PLP-dependent transferases
BER93_RS05840	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS05840	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER93_RS05845	SSF53474	alpha/beta-Hydrolases
BER93_RS05855	SSF53383	PLP-dependent transferases
BER93_RS05865	SSF52833	Thioredoxin-like
BER93_RS05870	SSF101874	YceI-like
BER93_RS05875	SSF81342	Transmembrane di-heme cytochromes
BER93_RS05880	SSF101874	YceI-like
BER93_RS05885	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS05885	SSF52172	CheY-like
BER93_RS05885	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS05885	SSF63829	Calcium-dependent phosphotriesterase
BER93_RS05900	SSF74650	Galactose mutarotase-like
BER93_RS05910	SSF47446	Signal peptide-binding domain
BER93_RS05910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS05920	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
BER93_RS05925	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
BER93_RS05930	SSF54565	Ribosomal protein S16
BER93_RS05935	SSF50346	PRC-barrel domain
BER93_RS05935	SSF50447	Translation proteins
BER93_RS05940	SSF75217	alpha/beta knot
BER93_RS05945	SSF50104	Translation proteins SH3-like domain
BER93_RS05955	SSF55174	Alpha-L RNA-binding motif
BER93_RS05985	SSF55073	Nucleotide cyclase
BER93_RS06000	SSF52954	Class II aaRS ABD-related
BER93_RS06000	SSF55186	ThrRS/AlaRS common domain
BER93_RS06000	SSF55681	Class II aaRS and biotin synthetases
BER93_RS06000	SSF81271	TGS-like
BER93_RS06005	SSF54364	Translation initiation factor IF3, N-terminal domain
BER93_RS06005	SSF55200	Translation initiation factor IF3, C-terminal domain
BER93_RS06010	SSF143034	L35p-like
BER93_RS06015	SSF74731	Ribosomal protein L20
BER93_RS06020	SSF46589	tRNA-binding arm
BER93_RS06020	SSF55681	Class II aaRS and biotin synthetases
BER93_RS06025	SSF46955	Putative DNA-binding domain
BER93_RS06025	SSF50249	Nucleic acid-binding proteins
BER93_RS06025	SSF54991	Anticodon-binding domain of PheRS
BER93_RS06025	SSF55681	Class II aaRS and biotin synthetases
BER93_RS06025	SSF56037	PheT/TilS domain
BER93_RS06030	SSF47729	IHF-like DNA-binding proteins
BER93_RS06035	SSF46955	Putative DNA-binding domain
BER93_RS06075	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER93_RS06080	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER93_RS06090	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER93_RS06110	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
BER93_RS06110	SSF52922	TK C-terminal domain-like
BER93_RS06125	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
BER93_RS06125	SSF56645	Acyl-CoA dehydrogenase NM domain-like
BER93_RS06130	SSF117070	LEA14-like
BER93_RS06135	SSF50814	Lipocalins
BER93_RS06155	SSF82771	GIY-YIG endonuclease
BER93_RS06170	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS06190	SSF111148	YggX-like
BER93_RS06195	SSF48150	DNA-glycosylase
BER93_RS06195	SSF55811	Nudix
BER93_RS06200	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS06205	SSF46689	Homeodomain-like
BER93_RS06205	SSF55785	PYP-like sensor domain (PAS domain)
BER93_RS06210	SSF54506	Diaminopimelate epimerase-like
BER93_RS06215	SSF51905	FAD/NAD(P)-binding domain
BER93_RS06215	SSF54373	FAD-linked reductases, C-terminal domain
BER93_RS06220	SSF54292	2Fe-2S ferredoxin-like
BER93_RS06225	SSF51905	FAD/NAD(P)-binding domain
BER93_RS06230	SSF51569	Aldolase
BER93_RS06235	SSF53720	ALDH-like
BER93_RS06240	SSF53092	Creatinase/prolidase N-terminal domain
BER93_RS06240	SSF55920	Creatinase/aminopeptidase
BER93_RS06260	SSF53474	alpha/beta-Hydrolases
BER93_RS06260	SSF82171	DPP6 N-terminal domain-like
BER93_RS06265	SSF51445	(Trans)glycosidases
BER93_RS06275	SSF51445	(Trans)glycosidases
BER93_RS06290	SSF52743	Subtilisin-like
BER93_RS06290	SSF54897	Protease propeptides/inhibitors
BER93_RS06295	SSF48208	Six-hairpin glycosidases
BER93_RS06300	SSF56935	Porins
BER93_RS06305	SSF48371	ARM repeat
BER93_RS06320	SSF56935	Porins
BER93_RS06325	SSF48208	Six-hairpin glycosidases
BER93_RS06340	SSF53098	Ribonuclease H-like
BER93_RS06345	SSF46689	Homeodomain-like
BER93_RS06355	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS06365	SSF52096	ClpP/crotonase
BER93_RS06370	SSF160975	AF1531-like
BER93_RS06370	SSF50249	Nucleic acid-binding proteins
BER93_RS06370	SSF89550	PHP domain-like
BER93_RS06375	SSF53098	Ribonuclease H-like
BER93_RS06380	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER93_RS06385	SSF51161	Trimeric LpxA-like enzymes
BER93_RS06390	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
BER93_RS06395	SSF51161	Trimeric LpxA-like enzymes
BER93_RS06410	SSF50156	PDZ domain-like
BER93_RS06415	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS06415	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER93_RS06415	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
BER93_RS06425	SSF64005	Undecaprenyl diphosphate synthase
BER93_RS06430	SSF55194	Ribosome recycling factor, RRF
BER93_RS06435	SSF53633	Carbamate kinase-like
BER93_RS06445	SSF46934	UBA-like
BER93_RS06445	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
BER93_RS06450	SSF52313	Ribosomal protein S2
BER93_RS06455	SSF49354	PapD-like
BER93_RS06475	SSF49354	PapD-like
BER93_RS06485	SSF55920	Creatinase/aminopeptidase
BER93_RS06490	SSF109604	HD-domain/PDEase-like
BER93_RS06490	SSF55021	ACT-like
BER93_RS06490	SSF81301	Nucleotidyltransferase
BER93_RS06490	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
BER93_RS06495	SSF51161	Trimeric LpxA-like enzymes
BER93_RS06500	SSF52833	Thioredoxin-like
BER93_RS06505	SSF53187	Zn-dependent exopeptidases
BER93_RS06505	SSF55031	Bacterial exopeptidase dimerisation domain
BER93_RS06510	SSF52402	Adenine nucleotide alpha hydrolases-like
BER93_RS06510	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
BER93_RS06515	SSF51126	Pectin lyase-like
BER93_RS06520	SSF56935	Porins
BER93_RS06525	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
BER93_RS06535	SSF47240	Ferritin-like
BER93_RS06545	SSF101904	GyrA/ParC C-terminal domain-like
BER93_RS06545	SSF56719	Type II DNA topoisomerase
BER93_RS06550	SSF46785	"Winged helix" DNA-binding domain
BER93_RS06555	SSF56954	Outer membrane efflux proteins (OEP)
BER93_RS06560	SSF111369	HlyD-like secretion proteins
BER93_RS06565	SSF103473	MFS general substrate transporter
BER93_RS06580	SSF103473	MFS general substrate transporter
BER93_RS06585	SSF144091	Rhomboid-like
BER93_RS06595	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER93_RS06605	SSF46785	"Winged helix" DNA-binding domain
BER93_RS06615	SSF52833	Thioredoxin-like
BER93_RS06625	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
BER93_RS06625	SSF63380	Riboflavin synthase domain-like
BER93_RS06630	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS06630	SSF90123	ABC transporter transmembrane region
BER93_RS06635	SSF117457	FumA C-terminal domain-like
BER93_RS06640	SSF53056	beta-carbonic anhydrase, cab
BER93_RS06650	SSF56931	Outer membrane phospholipase A (OMPLA)
BER93_RS06660	SSF50249	Nucleic acid-binding proteins
BER93_RS06670	SSF47175	Cytochromes
BER93_RS06675	SSF69572	Activating enzymes of the ubiquitin-like proteins
BER93_RS06680	SSF51556	Metallo-dependent hydrolases
BER93_RS06700	SSF47616	GST C-terminal domain-like
BER93_RS06700	SSF52833	Thioredoxin-like
BER93_RS06705	SSF52402	Adenine nucleotide alpha hydrolases-like
BER93_RS06705	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
BER93_RS06710	SSF52218	Flavoproteins
BER93_RS06715	SSF48024	N-terminal domain of DnaB helicase
BER93_RS06715	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS06720	SSF48173	Cryptochrome/photolyase FAD-binding domain
BER93_RS06720	SSF52425	Cryptochrome/photolyase, N-terminal domain
BER93_RS06725	SSF103088	OmpA-like
BER93_RS06735	SSF53098	Ribonuclease H-like
BER93_RS06740	SSF46689	Homeodomain-like
BER93_RS06760	SSF47413	lambda repressor-like DNA-binding domains
BER93_RS06765	SSF53720	ALDH-like
BER93_RS06770	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
BER93_RS06770	SSF56645	Acyl-CoA dehydrogenase NM domain-like
BER93_RS06775	SSF52096	ClpP/crotonase
BER93_RS06780	SSF52096	ClpP/crotonase
BER93_RS06785	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER93_RS06785	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS06790	SSF160240	Cation efflux protein cytoplasmic domain-like
BER93_RS06790	SSF161111	Cation efflux protein transmembrane domain-like
BER93_RS06795	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER93_RS06795	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS06795	SSF52096	ClpP/crotonase
BER93_RS06800	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
BER93_RS06800	SSF88946	Sigma2 domain of RNA polymerase sigma factors
BER93_RS06805	SSF89069	N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
BER93_RS06810	SSF50156	PDZ domain-like
BER93_RS06810	SSF50494	Trypsin-like serine proteases
BER93_RS06830	SSF46689	Homeodomain-like
BER93_RS06835	SSF53098	Ribonuclease H-like
BER93_RS06845	SSF143865	CorA soluble domain-like
BER93_RS06845	SSF144083	Magnesium transport protein CorA, transmembrane region
BER93_RS06855	SSF54631	CBS-domain pair
BER93_RS06855	SSF56176	FAD-binding/transporter-associated domain-like
BER93_RS06865	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER93_RS06870	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS06875	SSF102114	Radical SAM enzymes
BER93_RS06885	SSF53955	Lysozyme-like
BER93_RS06890	SSF50022	ISP domain
BER93_RS06895	SSF81342	Transmembrane di-heme cytochromes
BER93_RS06895	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
BER93_RS06900	SSF46626	Cytochrome c
BER93_RS06905	SSF47616	GST C-terminal domain-like
BER93_RS06905	SSF52833	Thioredoxin-like
BER93_RS06910	SSF101738	SspB-like
BER93_RS06920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS06925	SSF50486	FMT C-terminal domain-like
BER93_RS06940	SSF81273	H-NS histone-like proteins
BER93_RS06955	SSF47819	HRDC-like
BER93_RS06955	SSF53098	Ribonuclease H-like
BER93_RS06960	SSF56436	C-type lectin-like
BER93_RS06975	SSF50447	Translation proteins
BER93_RS06975	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS06975	SSF54980	EF-G C-terminal domain-like
BER93_RS06980	SSF51306	LexA/Signal peptidase
BER93_RS06990	SSF54768	dsRNA-binding domain-like
BER93_RS06990	SSF69065	RNase III domain-like
BER93_RS06995	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS06995	SSF54814	Prokaryotic type KH domain (KH-domain type II)
BER93_RS07000	SSF50249	Nucleic acid-binding proteins
BER93_RS07000	SSF57863	ArfGap/RecO-like zinc finger
BER93_RS07005	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
BER93_RS07005	SSF52172	CheY-like
BER93_RS07010	SSF50249	Nucleic acid-binding proteins
BER93_RS07010	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS07015	SSF55154	CYTH-like phosphatases
BER93_RS07020	SSF51905	FAD/NAD(P)-binding domain
BER93_RS07025	SSF48173	Cryptochrome/photolyase FAD-binding domain
BER93_RS07030	SSF51445	(Trans)glycosidases
BER93_RS07035	SSF53271	PRTase-like
BER93_RS07040	SSF53167	Purine and uridine phosphorylases
BER93_RS07045	SSF50249	Nucleic acid-binding proteins
BER93_RS07050	SSF56300	Metallo-dependent phosphatases
BER93_RS07055	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS07060	SSF117018	ATP-dependent DNA ligase DNA-binding domain
BER93_RS07060	SSF50249	Nucleic acid-binding proteins
BER93_RS07060	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
BER93_RS07070	SSF56281	Metallo-hydrolase/oxidoreductase
BER93_RS07100	SSF53901	Thiolase-like
BER93_RS07110	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS07110	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
BER93_RS07115	SSF81901	HCP-like
BER93_RS07140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS07145	SSF53955	Lysozyme-like
BER93_RS07145	SSF54106	LysM domain
BER93_RS07155	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
BER93_RS07160	SSF55120	Pseudouridine synthase
BER93_RS07165	SSF51366	Ribulose-phoshate binding barrel
BER93_RS07190	SSF46785	"Winged helix" DNA-binding domain
BER93_RS07190	SSF53850	Periplasmic binding protein-like II
BER93_RS07195	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
BER93_RS07200	SSF51366	Ribulose-phoshate binding barrel
BER93_RS07205	SSF52096	ClpP/crotonase
BER93_RS07210	SSF53738	Phosphoglucomutase, first 3 domains
BER93_RS07210	SSF55957	Phosphoglucomutase, C-terminal domain
BER93_RS07215	SSF51197	Clavaminate synthase-like
BER93_RS07220	SSF49464	Carboxypeptidase regulatory domain-like
BER93_RS07220	SSF49503	Cupredoxins
BER93_RS07225	SSF141868	EAL domain-like
BER93_RS07225	SSF158472	HAMP domain-like
BER93_RS07225	SSF55073	Nucleotide cyclase
BER93_RS07235	SSF46458	Globin-like
BER93_RS07240	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS07245	SSF51351	Triosephosphate isomerase (TIM)
BER93_RS07265	SSF56770	HydA/Nqo6-like
BER93_RS07270	SSF143243	Nqo5-like
BER93_RS07275	SSF56762	HydB/Nqo4-like
BER93_RS07280	SSF52833	Thioredoxin-like
BER93_RS07285	SSF140490	Nqo1C-terminal domain-like
BER93_RS07285	SSF142019	Nqo1 FMN-binding domain-like
BER93_RS07285	SSF142984	Nqo1 middle domain-like
BER93_RS07290	SSF50692	ADC-like
BER93_RS07290	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
BER93_RS07290	SSF54292	2Fe-2S ferredoxin-like
BER93_RS07290	SSF54862	4Fe-4S ferredoxins
BER93_RS07300	SSF54862	4Fe-4S ferredoxins
BER93_RS07335	SSF74942	YhbC-like, C-terminal domain
BER93_RS07335	SSF75420	YhbC-like, N-terminal domain
BER93_RS07340	SSF47794	Rad51 N-terminal domain-like
BER93_RS07340	SSF50249	Nucleic acid-binding proteins
BER93_RS07340	SSF54814	Prokaryotic type KH domain (KH-domain type II)
BER93_RS07340	SSF69705	Transcription factor NusA, N-terminal domain
BER93_RS07345	SSF46955	Putative DNA-binding domain
BER93_RS07345	SSF50447	Translation proteins
BER93_RS07345	SSF52156	Initiation factor IF2/eIF5b, domain 3
BER93_RS07345	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS07350	SSF89919	Ribosome-binding factor A, RbfA
BER93_RS07355	SSF55120	Pseudouridine synthase
BER93_RS07355	SSF88697	PUA domain-like
BER93_RS07360	SSF47060	S15/NS1 RNA-binding domain
BER93_RS07365	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
BER93_RS07365	SSF50249	Nucleic acid-binding proteins
BER93_RS07365	SSF54211	Ribosomal protein S5 domain 2-like
BER93_RS07365	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
BER93_RS07365	SSF55666	Ribonuclease PH domain 2-like
BER93_RS07385	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
BER93_RS07385	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
BER93_RS07390	SSF158997	Trm112p-like
BER93_RS07395	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
BER93_RS07400	SSF51246	Rudiment single hybrid motif
BER93_RS07400	SSF52440	PreATP-grasp domain
BER93_RS07400	SSF56059	Glutathione synthetase ATP-binding domain-like
BER93_RS07405	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
BER93_RS07405	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
BER93_RS07410	SSF52833	Thioredoxin-like
BER93_RS07415	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS07425	SSF49464	Carboxypeptidase regulatory domain-like
BER93_RS07425	SSF56935	Porins
BER93_RS07430	SSF102405	MCP/YpsA-like
BER93_RS07440	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS07445	SSF54523	Pili subunits
BER93_RS07450	SSF50998	Quinoprotein alcohol dehydrogenase-like
BER93_RS07460	SSF109604	HD-domain/PDEase-like
BER93_RS07460	SSF52172	CheY-like
BER93_RS07465	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
BER93_RS07465	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS07465	SSF52172	CheY-like
BER93_RS07465	SSF55785	PYP-like sensor domain (PAS domain)
BER93_RS07465	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS07475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS07485	SSF103473	MFS general substrate transporter
BER93_RS07490	SSF53927	Cytidine deaminase-like
BER93_RS07495	SSF50692	ADC-like
BER93_RS07495	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
BER93_RS07500	SSF46785	"Winged helix" DNA-binding domain
BER93_RS07510	SSF46689	Homeodomain-like
BER93_RS07515	SSF53098	Ribonuclease H-like
BER93_RS07520	SSF52172	CheY-like
BER93_RS07520	SSF55073	Nucleotide cyclase
BER93_RS07525	SSF51905	FAD/NAD(P)-binding domain
BER93_RS07530	SSF54368	Glutamine synthetase, N-terminal domain
BER93_RS07530	SSF55931	Glutamine synthetase/guanido kinase
BER93_RS07535	SSF54368	Glutamine synthetase, N-terminal domain
BER93_RS07535	SSF55931	Glutamine synthetase/guanido kinase
BER93_RS07540	SSF53850	Periplasmic binding protein-like II
BER93_RS07545	SSF111369	HlyD-like secretion proteins
BER93_RS07550	SSF103473	MFS general substrate transporter
BER93_RS07555	SSF56954	Outer membrane efflux proteins (OEP)
BER93_RS07560	SSF50331	MOP-like
BER93_RS07560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS07565	SSF161098	MetI-like
BER93_RS07570	SSF161098	MetI-like
BER93_RS07575	SSF53720	ALDH-like
BER93_RS07585	SSF55785	PYP-like sensor domain (PAS domain)
BER93_RS07595	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
BER93_RS07595	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
BER93_RS07595	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER93_RS07600	SSF111369	HlyD-like secretion proteins
BER93_RS07605	SSF46689	Homeodomain-like
BER93_RS07605	SSF48498	Tetracyclin repressor-like, C-terminal domain
BER93_RS07610	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS07610	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
BER93_RS07655	SSF47598	Ribbon-helix-helix
BER93_RS07695	SSF46689	Homeodomain-like
BER93_RS07705	SSF53098	Ribonuclease H-like
BER93_RS07715	SSF46600	C-terminal UvrC-binding domain of UvrB
BER93_RS07715	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS07735	SSF54427	NTF2-like
BER93_RS07750	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS07755	SSF53955	Lysozyme-like
BER93_RS07770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS07805	SSF47090	PGBD-like
BER93_RS07810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS07825	SSF69318	Integrin alpha N-terminal domain
BER93_RS07830	SSF47090	PGBD-like
BER93_RS07835	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS07870	SSF47090	PGBD-like
BER93_RS07900	SSF56349	DNA breaking-rejoining enzymes
BER93_RS07920	SSF47413	lambda repressor-like DNA-binding domains
BER93_RS07945	SSF56349	DNA breaking-rejoining enzymes
BER93_RS07960	SSF74982	Small protein B (SmpB)
BER93_RS07965	SSF55961	Bet v1-like
BER93_RS07970	SSF54285	MoaD/ThiS
BER93_RS07980	SSF46785	"Winged helix" DNA-binding domain
BER93_RS07985	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS07990	SSF46785	"Winged helix" DNA-binding domain
BER93_RS07990	SSF55781	GAF domain-like
BER93_RS07995	SSF51064	Head domain of nucleotide exchange factor GrpE
BER93_RS07995	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
BER93_RS08000	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
BER93_RS08000	SSF53067	Actin-like ATPase domain
BER93_RS08005	SSF46565	Chaperone J-domain
BER93_RS08005	SSF49493	HSP40/DnaJ peptide-binding domain
BER93_RS08005	SSF57938	DnaJ/Hsp40 cysteine-rich domain
BER93_RS08010	SSF53613	Ribokinase-like
BER93_RS08015	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER93_RS08015	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS08015	SSF55021	ACT-like
BER93_RS08025	SSF56954	Outer membrane efflux proteins (OEP)
BER93_RS08030	SSF111369	HlyD-like secretion proteins
BER93_RS08035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS08035	SSF90123	ABC transporter transmembrane region
BER93_RS08050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS08050	SSF90123	ABC transporter transmembrane region
BER93_RS08055	SSF54211	Ribosomal protein S5 domain 2-like
BER93_RS08055	SSF54980	EF-G C-terminal domain-like
BER93_RS08060	SSF102405	MCP/YpsA-like
BER93_RS08065	SSF51905	FAD/NAD(P)-binding domain
BER93_RS08065	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
BER93_RS08070	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
BER93_RS08070	SSF51230	Single hybrid motif
BER93_RS08070	SSF52777	CoA-dependent acyltransferases
BER93_RS08075	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
BER93_RS08080	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER93_RS08085	SSF51197	Clavaminate synthase-like
BER93_RS08090	SSF48557	L-aspartase-like
BER93_RS08095	SSF48557	L-aspartase-like
BER93_RS08105	SSF46689	Homeodomain-like
BER93_RS08115	SSF53098	Ribonuclease H-like
BER93_RS08145	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS08150	SSF46785	"Winged helix" DNA-binding domain
BER93_RS08160	SSF52833	Thioredoxin-like
BER93_RS08165	SSF54534	FKBP-like
BER93_RS08170	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER93_RS08170	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS08170	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
BER93_RS08190	SSF47413	lambda repressor-like DNA-binding domains
BER93_RS08190	SSF53822	Periplasmic binding protein-like I
BER93_RS08195	SSF103473	MFS general substrate transporter
BER93_RS08200	SSF53613	Ribokinase-like
BER93_RS08205	SSF48208	Six-hairpin glycosidases
BER93_RS08210	SSF47644	Methionine synthase domain
BER93_RS08210	SSF51717	Dihydropteroate synthetase-like
BER93_RS08210	SSF52242	Cobalamin (vitamin B12)-binding domain
BER93_RS08210	SSF56507	Methionine synthase activation domain-like
BER93_RS08215	SSF82282	Homocysteine S-methyltransferase
BER93_RS08220	SSF46785	"Winged helix" DNA-binding domain
BER93_RS08220	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS08225	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
BER93_RS08225	SSF56645	Acyl-CoA dehydrogenase NM domain-like
BER93_RS08230	SSF52266	SGNH hydrolase
BER93_RS08240	SSF50249	Nucleic acid-binding proteins
BER93_RS08245	SSF55315	L30e-like
BER93_RS08245	SSF75217	alpha/beta knot
BER93_RS08250	SSF55073	Nucleotide cyclase
BER93_RS08255	SSF53098	Ribonuclease H-like
BER93_RS08260	SSF109755	PhoU-like
BER93_RS08265	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS08270	SSF161098	MetI-like
BER93_RS08275	SSF161098	MetI-like
BER93_RS08280	SSF53850	Periplasmic binding protein-like II
BER93_RS08290	SSF53850	Periplasmic binding protein-like II
BER93_RS08310	SSF53056	beta-carbonic anhydrase, cab
BER93_RS08320	SSF48150	DNA-glycosylase
BER93_RS08335	SSF54534	FKBP-like
BER93_RS08340	SSF55811	Nudix
BER93_RS08345	SSF52821	Rhodanese/Cell cycle control phosphatase
BER93_RS08355	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
BER93_RS08360	SSF50800	PK beta-barrel domain-like
BER93_RS08365	SSF53474	alpha/beta-Hydrolases
BER93_RS08370	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER93_RS08375	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS08380	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS08385	SSF111331	NAD kinase/diacylglycerol kinase-like
BER93_RS08410	SSF53098	Ribonuclease H-like
BER93_RS08415	SSF51905	FAD/NAD(P)-binding domain
BER93_RS08420	SSF53383	PLP-dependent transferases
BER93_RS08430	SSF51182	RmlC-like cupins
BER93_RS08435	SSF53056	beta-carbonic anhydrase, cab
BER93_RS08440	SSF50475	FMN-binding split barrel
BER93_RS08460	SSF50249	Nucleic acid-binding proteins
BER93_RS08460	SSF55681	Class II aaRS and biotin synthetases
BER93_RS08465	SSF89360	HesB-like domain
BER93_RS08470	SSF54995	Ribosomal protein S6
BER93_RS08475	SSF46911	Ribosomal protein S18
BER93_RS08480	SSF55653	Ribosomal protein L9 C-domain
BER93_RS08480	SSF55658	L9 N-domain-like
BER93_RS08485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS08485	SSF57997	Tropomyosin
BER93_RS08485	SSF75553	Smc hinge domain
BER93_RS08490	SSF64383	Cell-division protein ZipA, C-terminal domain
BER93_RS08495	SSF47781	RuvA domain 2-like
BER93_RS08495	SSF50249	Nucleic acid-binding proteins
BER93_RS08495	SSF52113	BRCT domain
BER93_RS08495	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
BER93_RS08500	SSF55681	Class II aaRS and biotin synthetases
BER93_RS08515	SSF100950	NagB/RpiA/CoA transferase-like
BER93_RS08520	SSF101904	GyrA/ParC C-terminal domain-like
BER93_RS08520	SSF56719	Type II DNA topoisomerase
BER93_RS08530	SSF53098	Ribonuclease H-like
BER93_RS08535	SSF111326	Urocanase
BER93_RS08540	SSF53187	Zn-dependent exopeptidases
BER93_RS08545	SSF48557	L-aspartase-like
BER93_RS08550	SSF51338	Composite domain of metallo-dependent hydrolases
BER93_RS08550	SSF51556	Metallo-dependent hydrolases
BER93_RS08555	SSF51338	Composite domain of metallo-dependent hydrolases
BER93_RS08555	SSF51556	Metallo-dependent hydrolases
BER93_RS08560	SSF46785	"Winged helix" DNA-binding domain
BER93_RS08560	SSF64288	Chorismate lyase-like
BER93_RS08575	SSF49879	SMAD/FHA domain
BER93_RS08590	SSF52833	Thioredoxin-like
BER93_RS08595	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS08605	SSF103263	Chorismate synthase, AroC
BER93_RS08610	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS08610	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
BER93_RS08615	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS08615	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER93_RS08625	SSF158472	HAMP domain-like
BER93_RS08625	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BER93_RS08630	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS08635	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS08635	SSF52172	CheY-like
BER93_RS08635	SSF55785	PYP-like sensor domain (PAS domain)
BER93_RS08635	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS08640	SSF46689	Homeodomain-like
BER93_RS08655	SSF48452	TPR-like
BER93_RS08665	SSF52833	Thioredoxin-like
BER93_RS08675	SSF52743	Subtilisin-like
BER93_RS08685	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
BER93_RS08685	SSF88946	Sigma2 domain of RNA polymerase sigma factors
BER93_RS08710	SSF103473	MFS general substrate transporter
BER93_RS08715	SSF51679	Bacterial luciferase-like
BER93_RS08725	SSF54631	CBS-domain pair
BER93_RS08725	SSF56176	FAD-binding/transporter-associated domain-like
BER93_RS08745	SSF53474	alpha/beta-Hydrolases
BER93_RS08750	SSF54211	Ribosomal protein S5 domain 2-like
BER93_RS08750	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS08750	SSF56719	Type II DNA topoisomerase
BER93_RS08760	SSF52317	Class I glutamine amidotransferase-like
BER93_RS08760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS08765	SSF51569	Aldolase
BER93_RS08770	SSF51604	Enolase C-terminal domain-like
BER93_RS08770	SSF54826	Enolase N-terminal domain-like
BER93_RS08780	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS08785	SSF69765	IpsF-like
BER93_RS08790	SSF55120	Pseudouridine synthase
BER93_RS08795	SSF160443	SMR domain-like
BER93_RS08800	SSF64167	SurE-like
BER93_RS08805	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS08815	SSF51261	Duplicated hybrid motif
BER93_RS08855	SSF53474	alpha/beta-Hydrolases
BER93_RS08865	SSF48452	TPR-like
BER93_RS08875	SSF52833	Thioredoxin-like
BER93_RS08885	SSF82093	Heme chaperone CcmE
BER93_RS08905	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS08910	SSF53383	PLP-dependent transferases
BER93_RS08915	SSF56317	Carbon-nitrogen hydrolase
BER93_RS08920	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
BER93_RS08930	SSF55120	Pseudouridine synthase
BER93_RS08930	SSF55174	Alpha-L RNA-binding motif
BER93_RS08935	SSF46785	"Winged helix" DNA-binding domain
BER93_RS08945	SSF54909	Dimeric alpha+beta barrel
BER93_RS08950	SSF82657	BolA-like
BER93_RS08955	SSF47413	lambda repressor-like DNA-binding domains
BER93_RS08955	SSF53822	Periplasmic binding protein-like I
BER93_RS08960	SSF49452	Starch-binding domain-like
BER93_RS08960	SSF56935	Porins
BER93_RS08970	SSF53850	Periplasmic binding protein-like II
BER93_RS08975	SSF161098	MetI-like
BER93_RS08980	SSF161098	MetI-like
BER93_RS08985	SSF48208	Six-hairpin glycosidases
BER93_RS08985	SSF49785	Galactose-binding domain-like
BER93_RS09005	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER93_RS09010	SSF56317	Carbon-nitrogen hydrolase
BER93_RS09015	SSF55909	Pentein
BER93_RS09025	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS09030	SSF50249	Nucleic acid-binding proteins
BER93_RS09035	SSF47729	IHF-like DNA-binding proteins
BER93_RS09045	SSF81901	HCP-like
BER93_RS09055	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS09055	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS09060	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS09070	SSF46689	Homeodomain-like
BER93_RS09095	SSF158757	SMc04008-like
BER93_RS09100	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS09100	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
BER93_RS09105	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
BER93_RS09105	SSF54631	CBS-domain pair
BER93_RS09110	SSF52317	Class I glutamine amidotransferase-like
BER93_RS09110	SSF52402	Adenine nucleotide alpha hydrolases-like
BER93_RS09110	SSF54810	GMP synthetase C-terminal dimerisation domain
BER93_RS09115	SSF56349	DNA breaking-rejoining enzymes
BER93_RS09120	SSF46955	Putative DNA-binding domain
BER93_RS09140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS09155	SSF47598	Ribbon-helix-helix
BER93_RS09160	SSF88723	PIN domain-like
BER93_RS09165	SSF101082	Typo IV secretion system protein TraC
BER93_RS09170	SSF46689	Homeodomain-like
BER93_RS09180	SSF53098	Ribonuclease H-like
BER93_RS09210	SSF52954	Class II aaRS ABD-related
BER93_RS09210	SSF55681	Class II aaRS and biotin synthetases
BER93_RS09215	SSF48295	TrpR-like
BER93_RS09220	SSF53850	Periplasmic binding protein-like II
BER93_RS09225	SSF53720	ALDH-like
BER93_RS09230	SSF53383	PLP-dependent transferases
BER93_RS09235	SSF54211	Ribosomal protein S5 domain 2-like
BER93_RS09235	SSF56784	HAD-like
BER93_RS09240	SSF52317	Class I glutamine amidotransferase-like
BER93_RS09245	SSF51366	Ribulose-phoshate binding barrel
BER93_RS09250	SSF51366	Ribulose-phoshate binding barrel
BER93_RS09255	SSF101386	all-alpha NTP pyrophosphatases
BER93_RS09255	SSF141734	HisI-like
BER93_RS09260	SSF56300	Metallo-dependent phosphatases
BER93_RS09275	SSF52129	Caspase-like
BER93_RS09280	SSF56784	HAD-like
BER93_RS09285	SSF51182	RmlC-like cupins
BER93_RS09290	SSF53639	AraD/HMP-PK domain-like
BER93_RS09305	SSF55811	Nudix
BER93_RS09310	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS09310	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
BER93_RS09310	SSF55021	ACT-like
BER93_RS09315	SSF55103	FAD-linked oxidases, C-terminal domain
BER93_RS09315	SSF56176	FAD-binding/transporter-associated domain-like
BER93_RS09330	SSF50104	Translation proteins SH3-like domain
BER93_RS09330	SSF50249	Nucleic acid-binding proteins
BER93_RS09335	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS09340	SSF51569	Aldolase
BER93_RS09345	SSF52096	ClpP/crotonase
BER93_RS09350	SSF50037	C-terminal domain of transcriptional repressors
BER93_RS09355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS09370	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS09370	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER93_RS09375	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
BER93_RS09375	SSF52317	Class I glutamine amidotransferase-like
BER93_RS09380	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS09385	SSF88723	PIN domain-like
BER93_RS09390	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
BER93_RS09390	SSF52335	Methylglyoxal synthase-like
BER93_RS09390	SSF52440	PreATP-grasp domain
BER93_RS09390	SSF56059	Glutathione synthetase ATP-binding domain-like
BER93_RS09395	SSF46557	GreA transcript cleavage protein, N-terminal domain
BER93_RS09395	SSF54534	FKBP-like
BER93_RS09405	SSF64182	DHH phosphoesterases
BER93_RS09410	SSF75620	Release factor
BER93_RS09415	SSF50249	Nucleic acid-binding proteins
BER93_RS09415	SSF55681	Class II aaRS and biotin synthetases
BER93_RS09420	SSF109604	HD-domain/PDEase-like
BER93_RS09420	SSF52172	CheY-like
BER93_RS09430	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
BER93_RS09430	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS09430	SSF52172	CheY-like
BER93_RS09430	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS09435	SSF52096	ClpP/crotonase
BER93_RS09440	SSF56801	Acetyl-CoA synthetase-like
BER93_RS09450	SSF52016	LeuD/IlvD-like
BER93_RS09450	SSF53732	Aconitase iron-sulfur domain
BER93_RS09455	SSF89447	AbrB/MazE/MraZ-like
BER93_RS09460	SSF88723	PIN domain-like
BER93_RS09465	SSF52016	LeuD/IlvD-like
BER93_RS09465	SSF53732	Aconitase iron-sulfur domain
BER93_RS09465	SSF74778	Aconitase B, N-terminal domain
BER93_RS09470	SSF53474	alpha/beta-Hydrolases
BER93_RS09475	SSF141868	EAL domain-like
BER93_RS09475	SSF55073	Nucleotide cyclase
BER93_RS09475	SSF55781	GAF domain-like
BER93_RS09475	SSF55785	PYP-like sensor domain (PAS domain)
BER93_RS09480	SSF52172	CheY-like
BER93_RS09480	SSF52738	Methylesterase CheB, C-terminal domain
BER93_RS09485	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
BER93_RS09490	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
BER93_RS09490	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS09500	SSF50341	CheW-like
BER93_RS09510	SSF158472	HAMP domain-like
BER93_RS09510	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BER93_RS09520	SSF158472	HAMP domain-like
BER93_RS09520	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BER93_RS09525	SSF158472	HAMP domain-like
BER93_RS09525	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BER93_RS09535	SSF158472	HAMP domain-like
BER93_RS09535	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BER93_RS09560	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
BER93_RS09560	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS09560	SSF50341	CheW-like
BER93_RS09560	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS09565	SSF52172	CheY-like
BER93_RS09570	SSF52091	SpoIIaa-like
BER93_RS09575	SSF50341	CheW-like
BER93_RS09580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS09585	SSF103088	OmpA-like
BER93_RS09620	SSF50249	Nucleic acid-binding proteins
BER93_RS09640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS09660	SSF50249	Nucleic acid-binding proteins
BER93_RS09705	SSF117916	Fe-S cluster assembly (FSCA) domain-like
BER93_RS09705	SSF89360	HesB-like domain
BER93_RS09710	SSF55248	PCD-like
BER93_RS09715	SSF74653	TolA/TonB C-terminal domain
BER93_RS09720	SSF46689	Homeodomain-like
BER93_RS09725	SSF53098	Ribonuclease H-like
BER93_RS09730	SSF53098	Ribonuclease H-like
BER93_RS09750	SSF55120	Pseudouridine synthase
BER93_RS09750	SSF55174	Alpha-L RNA-binding motif
BER93_RS09755	SSF50249	Nucleic acid-binding proteins
BER93_RS09760	SSF46894	C-terminal effector domain of the bipartite response regulators
BER93_RS09760	SSF52172	CheY-like
BER93_RS09765	SSF52821	Rhodanese/Cell cycle control phosphatase
BER93_RS09775	SSF54534	FKBP-like
BER93_RS09785	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER93_RS09785	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS09785	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
BER93_RS09805	SSF46689	Homeodomain-like
BER93_RS09815	SSF53098	Ribonuclease H-like
BER93_RS09845	SSF69255	gp5 N-terminal domain-like
BER93_RS09845	SSF69279	Phage tail proteins
BER93_RS09855	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS09855	SSF81923	Double Clp-N motif
BER93_RS09870	SSF160719	gpW/gp25-like
BER93_RS09875	SSF141452	Hcp1-like
BER93_RS09890	SSF48452	TPR-like
BER93_RS09910	SSF69255	gp5 N-terminal domain-like
BER93_RS09935	SSF69255	gp5 N-terminal domain-like
BER93_RS09935	SSF69349	Phage fibre proteins
BER93_RS09975	SSF69255	gp5 N-terminal domain-like
BER93_RS09975	SSF69349	Phage fibre proteins
BER93_RS09980	SSF46689	Homeodomain-like
BER93_RS10000	SSF51126	Pectin lyase-like
BER93_RS10015	SSF47240	Ferritin-like
BER93_RS10040	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS10040	SSF53790	Tetrapyrrole methylase
BER93_RS10040	SSF75615	Siroheme synthase middle domains-like
BER93_RS10050	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS10055	SSF53218	Molybdenum cofactor biosynthesis proteins
BER93_RS10055	SSF63867	MoeA C-terminal domain-like
BER93_RS10055	SSF63882	MoeA N-terminal region -like
BER93_RS10070	SSF56935	Porins
BER93_RS10075	SSF52821	Rhodanese/Cell cycle control phosphatase
BER93_RS10075	SSF69572	Activating enzymes of the ubiquitin-like proteins
BER93_RS10080	SSF53218	Molybdenum cofactor biosynthesis proteins
BER93_RS10080	SSF63867	MoeA C-terminal domain-like
BER93_RS10080	SSF63882	MoeA N-terminal region -like
BER93_RS10085	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS10090	SSF50998	Quinoprotein alcohol dehydrogenase-like
BER93_RS10095	SSF48452	TPR-like
BER93_RS10105	SSF48452	TPR-like
BER93_RS10110	SSF102114	Radical SAM enzymes
BER93_RS10115	SSF54919	Nucleoside diphosphate kinase, NDK
BER93_RS10120	SSF46689	Homeodomain-like
BER93_RS10120	SSF48498	Tetracyclin repressor-like, C-terminal domain
BER93_RS10125	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER93_RS10125	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS10125	SSF52096	ClpP/crotonase
BER93_RS10130	SSF53901	Thiolase-like
BER93_RS10135	SSF81340	Clc chloride channel
BER93_RS10145	SSF48019	post-AAA+ oligomerization domain-like
BER93_RS10145	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS10150	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
BER93_RS10155	SSF54001	Cysteine proteinases
BER93_RS10160	SSF46785	"Winged helix" DNA-binding domain
BER93_RS10160	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS10165	SSF51905	FAD/NAD(P)-binding domain
BER93_RS10170	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER93_RS10175	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER93_RS10180	SSF50249	Nucleic acid-binding proteins
BER93_RS10185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS10185	SSF81923	Double Clp-N motif
BER93_RS10190	SSF54736	ClpS-like
BER93_RS10195	SSF55811	Nudix
BER93_RS10200	SSF52402	Adenine nucleotide alpha hydrolases-like
BER93_RS10205	SSF101322	YcfC-like
BER93_RS10210	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BER93_RS10230	SSF55785	PYP-like sensor domain (PAS domain)
BER93_RS10230	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS10235	SSF141868	EAL domain-like
BER93_RS10235	SSF52172	CheY-like
BER93_RS10235	SSF55073	Nucleotide cyclase
BER93_RS10240	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS10240	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS10245	SSF140566	FlgN-like
BER93_RS10250	SSF101498	Anti-sigma factor FlgM
BER93_RS10260	SSF50341	CheW-like
BER93_RS10260	SSF52172	CheY-like
BER93_RS10280	SSF117143	Flagellar hook protein flgE
BER93_RS10285	SSF117143	Flagellar hook protein flgE
BER93_RS10290	SSF117143	Flagellar hook protein flgE
BER93_RS10310	SSF64518	Phase 1 flagellin
BER93_RS10315	SSF64518	Phase 1 flagellin
BER93_RS10320	SSF64518	Phase 1 flagellin
BER93_RS10330	SSF101116	Flagellar export chaperone FliS
BER93_RS10345	SSF46894	C-terminal effector domain of the bipartite response regulators
BER93_RS10345	SSF52172	CheY-like
BER93_RS10355	SSF52172	CheY-like
BER93_RS10360	SSF46689	Homeodomain-like
BER93_RS10360	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS10370	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS10370	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER93_RS10390	SSF48029	FliG
BER93_RS10400	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS10420	SSF101801	Surface presentation of antigens (SPOA)
BER93_RS10420	SSF103039	CheC-like
BER93_RS10425	SSF101801	Surface presentation of antigens (SPOA)
BER93_RS10455	SSF55073	Nucleotide cyclase
BER93_RS10460	SSF55073	Nucleotide cyclase
BER93_RS10460	SSF63829	Calcium-dependent phosphotriesterase
BER93_RS10465	SSF160544	EscU C-terminal domain-like
BER93_RS10475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS10480	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS10485	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
BER93_RS10485	SSF88946	Sigma2 domain of RNA polymerase sigma factors
BER93_RS10490	SSF52172	CheY-like
BER93_RS10495	SSF75708	Chemotaxis phosphatase CheZ
BER93_RS10500	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
BER93_RS10500	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS10500	SSF50341	CheW-like
BER93_RS10500	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS10550	SSF48371	ARM repeat
BER93_RS10565	SSF103515	Autotransporter
BER93_RS10565	SSF52743	Subtilisin-like
BER93_RS10570	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER93_RS10580	SSF46689	Homeodomain-like
BER93_RS10605	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
BER93_RS10615	SSF53474	alpha/beta-Hydrolases
BER93_RS10625	SSF54211	Ribosomal protein S5 domain 2-like
BER93_RS10625	SSF55060	GHMP Kinase, C-terminal domain
BER93_RS10630	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS10630	SSF53633	Carbamate kinase-like
BER93_RS10630	SSF55021	ACT-like
BER93_RS10630	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER93_RS10640	SSF46689	Homeodomain-like
BER93_RS10670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS10670	SSF52980	Restriction endonuclease-like
BER93_RS10680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS10685	SSF53098	Ribonuclease H-like
BER93_RS10690	SSF46689	Homeodomain-like
BER93_RS10695	SSF53720	ALDH-like
BER93_RS10705	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS10710	SSF51395	FMN-linked oxidoreductases
BER93_RS10715	SSF56176	FAD-binding/transporter-associated domain-like
BER93_RS10715	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
BER93_RS10720	SSF103481	Multidrug resistance efflux transporter EmrE
BER93_RS10725	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
BER93_RS10735	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS10735	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS10740	SSF46689	Homeodomain-like
BER93_RS10740	SSF52172	CheY-like
BER93_RS10750	SSF141868	EAL domain-like
BER93_RS10750	SSF55073	Nucleotide cyclase
BER93_RS10750	SSF55781	GAF domain-like
BER93_RS10795	SSF51445	(Trans)glycosidases
BER93_RS10795	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
BER93_RS10805	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS10830	SSF47090	PGBD-like
BER93_RS10840	SSF53697	SIS domain
BER93_RS10845	SSF50692	ADC-like
BER93_RS10850	SSF52374	Nucleotidylyl transferase
BER93_RS10855	SSF51621	Phosphoenolpyruvate/pyruvate domain
BER93_RS10860	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
BER93_RS10865	SSF81301	Nucleotidyltransferase
BER93_RS10865	SSF81891	Poly A polymerase C-terminal region-like
BER93_RS10880	SSF103473	MFS general substrate transporter
BER93_RS10885	SSF51658	Xylose isomerase-like
BER93_RS10890	SSF53067	Actin-like ATPase domain
BER93_RS10895	SSF48208	Six-hairpin glycosidases
BER93_RS10900	SSF51011	Glycosyl hydrolase domain
BER93_RS10900	SSF51445	(Trans)glycosidases
BER93_RS10900	SSF56988	Anthrax protective antigen
BER93_RS10900	SSF74650	Galactose mutarotase-like
BER93_RS10905	SSF51445	(Trans)glycosidases
BER93_RS10910	SSF49785	Galactose-binding domain-like
BER93_RS10910	SSF52266	SGNH hydrolase
BER93_RS10915	SSF56935	Porins
BER93_RS10945	SSF46785	"Winged helix" DNA-binding domain
BER93_RS10945	SSF53850	Periplasmic binding protein-like II
BER93_RS10950	SSF51569	Aldolase
BER93_RS10955	SSF51604	Enolase C-terminal domain-like
BER93_RS10955	SSF54826	Enolase N-terminal domain-like
BER93_RS10960	SSF63829	Calcium-dependent phosphotriesterase
BER93_RS10970	SSF54862	4Fe-4S ferredoxins
BER93_RS10980	SSF51569	Aldolase
BER93_RS10985	SSF55021	ACT-like
BER93_RS10990	SSF89946	Hypothetical protein VC0424
BER93_RS10995	SSF52833	Thioredoxin-like
BER93_RS11000	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS11000	SSF88723	PIN domain-like
BER93_RS11010	SSF53613	Ribokinase-like
BER93_RS11025	SSF46785	"Winged helix" DNA-binding domain
BER93_RS11025	SSF53850	Periplasmic binding protein-like II
BER93_RS11030	SSF51182	RmlC-like cupins
BER93_RS11050	SSF117130	CsrA-like
BER93_RS11055	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
BER93_RS11055	SSF50447	Translation proteins
BER93_RS11055	SSF55186	ThrRS/AlaRS common domain
BER93_RS11055	SSF55681	Class II aaRS and biotin synthetases
BER93_RS11065	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS11065	SSF54752	RecA protein, C-terminal domain
BER93_RS11070	SSF46785	"Winged helix" DNA-binding domain
BER93_RS11070	SSF51306	LexA/Signal peptidase
BER93_RS11075	SSF56112	Protein kinase-like (PK-like)
BER93_RS11085	SSF56935	Porins
BER93_RS11090	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
BER93_RS11100	SSF51126	Pectin lyase-like
BER93_RS11125	SSF46689	Homeodomain-like
BER93_RS11130	SSF53098	Ribonuclease H-like
BER93_RS11135	SSF53098	Ribonuclease H-like
BER93_RS11155	SSF47823	lambda integrase-like, N-terminal domain
BER93_RS11155	SSF56349	DNA breaking-rejoining enzymes
BER93_RS11165	SSF56935	Porins
BER93_RS11175	SSF56935	Porins
BER93_RS11180	SSF142433	CinA-like
BER93_RS11190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS11190	SSF54980	EF-G C-terminal domain-like
BER93_RS11195	SSF50182	Sm-like ribonucleoproteins
BER93_RS11200	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS11205	SSF51717	Dihydropteroate synthetase-like
BER93_RS11210	SSF140990	FtsH protease domain-like
BER93_RS11210	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS11215	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS11220	SSF75471	YhbY-like
BER93_RS11225	SSF64076	MTH938-like
BER93_RS11245	SSF46689	Homeodomain-like
BER93_RS11330	SSF69255	gp5 N-terminal domain-like
BER93_RS11330	SSF69279	Phage tail proteins
BER93_RS11335	SSF56436	C-type lectin-like
BER93_RS11345	SSF69255	gp5 N-terminal domain-like
BER93_RS11345	SSF69279	Phage tail proteins
BER93_RS11360	SSF103088	OmpA-like
BER93_RS11370	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS11385	SSF55166	Hedgehog/DD-peptidase
BER93_RS11440	SSF48452	TPR-like
BER93_RS11445	SSF69255	gp5 N-terminal domain-like
BER93_RS11445	SSF69279	Phage tail proteins
BER93_RS11445	SSF69349	Phage fibre proteins
BER93_RS11505	SSF46600	C-terminal UvrC-binding domain of UvrB
BER93_RS11505	SSF47781	RuvA domain 2-like
BER93_RS11505	SSF82771	GIY-YIG endonuclease
BER93_RS11510	SSF101898	NHL repeat
BER93_RS11510	SSF52833	Thioredoxin-like
BER93_RS11520	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS11525	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS11530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS11530	SSF90123	ABC transporter transmembrane region
BER93_RS11545	SSF56281	Metallo-hydrolase/oxidoreductase
BER93_RS11550	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS11555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS11570	SSF109910	YgfY-like
BER93_RS11575	SSF46548	alpha-helical ferredoxin
BER93_RS11575	SSF54292	2Fe-2S ferredoxin-like
BER93_RS11585	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
BER93_RS11585	SSF51905	FAD/NAD(P)-binding domain
BER93_RS11585	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
BER93_RS11590	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
BER93_RS11595	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
BER93_RS11600	SSF103025	Folate-binding domain
BER93_RS11605	SSF50331	MOP-like
BER93_RS11605	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS11610	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS11610	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER93_RS11615	SSF53067	Actin-like ATPase domain
BER93_RS11620	SSF100950	NagB/RpiA/CoA transferase-like
BER93_RS11625	SSF143975	IlvD/EDD N-terminal domain-like
BER93_RS11625	SSF52016	LeuD/IlvD-like
BER93_RS11630	SSF51569	Aldolase
BER93_RS11640	SSF46626	Cytochrome c
BER93_RS11645	SSF46626	Cytochrome c
BER93_RS11680	SSF52172	CheY-like
BER93_RS11685	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS11685	SSF52172	CheY-like
BER93_RS11685	SSF55781	GAF domain-like
BER93_RS11685	SSF55785	PYP-like sensor domain (PAS domain)
BER93_RS11685	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS11690	SSF158832	Tex N-terminal region-like
BER93_RS11690	SSF47781	RuvA domain 2-like
BER93_RS11690	SSF50249	Nucleic acid-binding proteins
BER93_RS11690	SSF53098	Ribonuclease H-like
BER93_RS11715	SSF53474	alpha/beta-Hydrolases
BER93_RS11730	SSF55811	Nudix
BER93_RS11745	SSF51621	Phosphoenolpyruvate/pyruvate domain
BER93_RS11745	SSF52009	Phosphohistidine domain
BER93_RS11745	SSF56059	Glutathione synthetase ATP-binding domain-like
BER93_RS11750	SSF50182	Sm-like ribonucleoproteins
BER93_RS11750	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
BER93_RS11750	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
BER93_RS11755	SSF53098	Ribonuclease H-like
BER93_RS11760	SSF53927	Cytidine deaminase-like
BER93_RS11765	SSF46785	"Winged helix" DNA-binding domain
BER93_RS11775	SSF53474	alpha/beta-Hydrolases
BER93_RS11820	SSF46689	Homeodomain-like
BER93_RS11825	SSF53098	Ribonuclease H-like
BER93_RS11840	SSF53098	Ribonuclease H-like
BER93_RS11845	SSF46689	Homeodomain-like
BER93_RS11865	SSF53720	ALDH-like
BER93_RS11870	SSF53633	Carbamate kinase-like
BER93_RS11870	SSF88697	PUA domain-like
BER93_RS11875	SSF54909	Dimeric alpha+beta barrel
BER93_RS11880	SSF51182	RmlC-like cupins
BER93_RS11885	SSF48557	L-aspartase-like
BER93_RS11890	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS11890	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER93_RS11895	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER93_RS11900	SSF53633	Carbamate kinase-like
BER93_RS11900	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER93_RS11905	SSF53187	Zn-dependent exopeptidases
BER93_RS11905	SSF55031	Bacterial exopeptidase dimerisation domain
BER93_RS11910	SSF52402	Adenine nucleotide alpha hydrolases-like
BER93_RS11910	SSF69864	Argininosuccinate synthetase, C-terminal domain
BER93_RS11915	SSF53671	Aspartate/ornithine carbamoyltransferase
BER93_RS11925	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
BER93_RS11925	SSF52374	Nucleotidylyl transferase
BER93_RS11930	SSF82649	SufE/NifU
BER93_RS11935	SSF103473	MFS general substrate transporter
BER93_RS11940	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
BER93_RS11940	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
BER93_RS11950	SSF51338	Composite domain of metallo-dependent hydrolases
BER93_RS11950	SSF51556	Metallo-dependent hydrolases
BER93_RS11955	SSF51261	Duplicated hybrid motif
BER93_RS11965	SSF50475	FMN-binding split barrel
BER93_RS11975	SSF50494	Trypsin-like serine proteases
BER93_RS11980	SSF51126	Pectin lyase-like
BER93_RS11985	SSF51126	Pectin lyase-like
BER93_RS11995	SSF56784	HAD-like
BER93_RS12000	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS12005	SSF51338	Composite domain of metallo-dependent hydrolases
BER93_RS12005	SSF51556	Metallo-dependent hydrolases
BER93_RS12015	SSF50104	Translation proteins SH3-like domain
BER93_RS12015	SSF50249	Nucleic acid-binding proteins
BER93_RS12020	SSF102114	Radical SAM enzymes
BER93_RS12025	SSF75217	alpha/beta knot
BER93_RS12030	SSF56655	Carbohydrate phosphatase
BER93_RS12035	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
BER93_RS12035	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
BER93_RS12040	SSF53933	Microbial ribonucleases
BER93_RS12045	SSF52038	Barstar-related
BER93_RS12050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS12055	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS12060	SSF53271	PRTase-like
BER93_RS12070	SSF53474	alpha/beta-Hydrolases
BER93_RS12075	SSF47616	GST C-terminal domain-like
BER93_RS12075	SSF52833	Thioredoxin-like
BER93_RS12080	SSF50249	Nucleic acid-binding proteins
BER93_RS12090	SSF52980	Restriction endonuclease-like
BER93_RS12095	SSF160996	HI0933 insert domain-like
BER93_RS12095	SSF51905	FAD/NAD(P)-binding domain
BER93_RS12100	SSF141868	EAL domain-like
BER93_RS12100	SSF52172	CheY-like
BER93_RS12100	SSF55073	Nucleotide cyclase
BER93_RS12100	SSF55785	PYP-like sensor domain (PAS domain)
BER93_RS12110	SSF52374	Nucleotidylyl transferase
BER93_RS12115	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS12135	SSF118116	DNA mismatch repair protein MutL
BER93_RS12135	SSF54211	Ribosomal protein S5 domain 2-like
BER93_RS12135	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS12140	SSF53187	Zn-dependent exopeptidases
BER93_RS12145	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS12150	SSF53613	Ribokinase-like
BER93_RS12150	SSF64153	YjeF N-terminal domain-like
BER93_RS12155	SSF54862	4Fe-4S ferredoxins
BER93_RS12190	SSF51215	Regulatory protein AraC
BER93_RS12200	SSF82282	Homocysteine S-methyltransferase
BER93_RS12215	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
BER93_RS12215	SSF50249	Nucleic acid-binding proteins
BER93_RS12215	SSF52374	Nucleotidylyl transferase
BER93_RS12215	SSF57770	Methionyl-tRNA synthetase (MetRS), Zn-domain
BER93_RS12220	SSF56784	HAD-like
BER93_RS12225	SSF54862	4Fe-4S ferredoxins
BER93_RS12240	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
BER93_RS12240	SSF88946	Sigma2 domain of RNA polymerase sigma factors
BER93_RS12255	SSF51905	FAD/NAD(P)-binding domain
BER93_RS12265	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS12280	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS12285	SSF55298	YjgF-like
BER93_RS12295	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER93_RS12300	SSF53474	alpha/beta-Hydrolases
BER93_RS12320	SSF55144	LigT-like
BER93_RS12330	SSF103473	MFS general substrate transporter
BER93_RS12335	SSF51395	FMN-linked oxidoreductases
BER93_RS12340	SSF82057	Prokaryotic SH3-related domain
BER93_RS12350	SSF160240	Cation efflux protein cytoplasmic domain-like
BER93_RS12350	SSF161111	Cation efflux protein transmembrane domain-like
BER93_RS12360	SSF53067	Actin-like ATPase domain
BER93_RS12375	SSF46557	GreA transcript cleavage protein, N-terminal domain
BER93_RS12375	SSF54534	FKBP-like
BER93_RS12390	SSF102114	Radical SAM enzymes
BER93_RS12405	SSF53474	alpha/beta-Hydrolases
BER93_RS12410	SSF54197	HIT-like
BER93_RS12415	SSF51283	dUTPase-like
BER93_RS12420	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS12425	SSF49452	Starch-binding domain-like
BER93_RS12425	SSF56935	Porins
BER93_RS12430	SSF51905	FAD/NAD(P)-binding domain
BER93_RS12435	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER93_RS12440	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER93_RS12445	SSF144091	Rhomboid-like
BER93_RS12450	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
BER93_RS12455	SSF51905	FAD/NAD(P)-binding domain
BER93_RS12455	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
BER93_RS12460	SSF51905	FAD/NAD(P)-binding domain
BER93_RS12460	SSF54373	FAD-linked reductases, C-terminal domain
BER93_RS12470	SSF54534	FKBP-like
BER93_RS12475	SSF54001	Cysteine proteinases
BER93_RS12480	SSF54001	Cysteine proteinases
BER93_RS12485	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
BER93_RS12490	SSF46689	Homeodomain-like
BER93_RS12495	SSF53098	Ribonuclease H-like
BER93_RS12510	SSF56349	DNA breaking-rejoining enzymes
BER93_RS12520	SSF56349	DNA breaking-rejoining enzymes
BER93_RS12530	SSF46785	"Winged helix" DNA-binding domain
BER93_RS12530	SSF53850	Periplasmic binding protein-like II
BER93_RS12535	SSF46589	tRNA-binding arm
BER93_RS12535	SSF55681	Class II aaRS and biotin synthetases
BER93_RS12540	SSF74653	TolA/TonB C-terminal domain
BER93_RS12545	SSF74653	TolA/TonB C-terminal domain
BER93_RS12550	SSF55205	EPT/RTPC-like
BER93_RS12555	SSF48600	Chorismate mutase II
BER93_RS12555	SSF53850	Periplasmic binding protein-like II
BER93_RS12555	SSF55021	ACT-like
BER93_RS12560	SSF53383	PLP-dependent transferases
BER93_RS12565	SSF56524	Oxidoreductase molybdopterin-binding domain
BER93_RS12570	SSF47413	lambda repressor-like DNA-binding domains
BER93_RS12570	SSF53822	Periplasmic binding protein-like I
BER93_RS12575	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
BER93_RS12575	SSF51621	Phosphoenolpyruvate/pyruvate domain
BER93_RS12575	SSF52009	Phosphohistidine domain
BER93_RS12575	SSF55594	HPr-like
BER93_RS12575	SSF55804	Phoshotransferase/anion transport protein
BER93_RS12580	SSF53613	Ribokinase-like
BER93_RS12585	SSF52794	PTS system IIB component-like
BER93_RS12595	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER93_RS12600	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER93_RS12610	SSF51713	tRNA-guanine transglycosylase
BER93_RS12615	SSF111337	QueA-like
BER93_RS12620	SSF46785	"Winged helix" DNA-binding domain
BER93_RS12620	SSF54909	Dimeric alpha+beta barrel
BER93_RS12625	SSF53383	PLP-dependent transferases
BER93_RS12630	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS12640	SSF53271	PRTase-like
BER93_RS12655	SSF48208	Six-hairpin glycosidases
BER93_RS12655	SSF81296	E set domains
BER93_RS12660	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
BER93_RS12665	SSF54862	4Fe-4S ferredoxins
BER93_RS12675	SSF52374	Nucleotidylyl transferase
BER93_RS12680	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS12685	SSF110942	HSP90 C-terminal domain
BER93_RS12685	SSF54211	Ribosomal protein S5 domain 2-like
BER93_RS12685	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS12695	SSF53474	alpha/beta-Hydrolases
BER93_RS12715	SSF53098	Ribonuclease H-like
BER93_RS12725	SSF118215	Proton glutamate symport protein
BER93_RS12730	SSF53649	Alkaline phosphatase-like
BER93_RS12735	SSF52402	Adenine nucleotide alpha hydrolases-like
BER93_RS12735	SSF56037	PheT/TilS domain
BER93_RS12735	SSF82829	MesJ substrate recognition domain-like
BER93_RS12740	SSF116842	XseB-like
BER93_RS12745	SSF48576	Terpenoid synthases
BER93_RS12760	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
BER93_RS12765	SSF158710	PSPTO4464-like
BER93_RS12770	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
BER93_RS12785	SSF50249	Nucleic acid-binding proteins
BER93_RS12790	SSF52972	ITPase-like
BER93_RS12800	SSF75217	alpha/beta knot
BER93_RS12805	SSF46689	Homeodomain-like
BER93_RS12820	SSF46565	Chaperone J-domain
BER93_RS12825	SSF81301	Nucleotidyltransferase
BER93_RS12830	SSF52374	Nucleotidylyl transferase
BER93_RS12835	SSF48019	post-AAA+ oligomerization domain-like
BER93_RS12835	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS12845	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
BER93_RS12845	SSF50677	ValRS/IleRS/LeuRS editing domain
BER93_RS12845	SSF52374	Nucleotidylyl transferase
BER93_RS12855	SSF48452	TPR-like
BER93_RS12855	SSF52833	Thioredoxin-like
BER93_RS12880	SSF53955	Lysozyme-like
BER93_RS12905	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS12935	SSF160544	EscU C-terminal domain-like
BER93_RS12950	SSF101801	Surface presentation of antigens (SPOA)
BER93_RS12985	SSF69635	Type III secretory system chaperone-like
BER93_RS12990	SSF51126	Pectin lyase-like
BER93_RS13020	SSF50891	Cyclophilin-like
BER93_RS13050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS13050	SSF90123	ABC transporter transmembrane region
BER93_RS13070	SSF117396	TM1631-like
BER93_RS13075	SSF103481	Multidrug resistance efflux transporter EmrE
BER93_RS13080	SSF55073	Nucleotide cyclase
BER93_RS13080	SSF55781	GAF domain-like
BER93_RS13085	SSF55120	Pseudouridine synthase
BER93_RS13085	SSF55174	Alpha-L RNA-binding motif
BER93_RS13095	SSF141868	EAL domain-like
BER93_RS13095	SSF55073	Nucleotide cyclase
BER93_RS13095	SSF55785	PYP-like sensor domain (PAS domain)
BER93_RS13100	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS13110	SSF55174	Alpha-L RNA-binding motif
BER93_RS13125	SSF161084	MAPEG domain-like
BER93_RS13145	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
BER93_RS13145	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
BER93_RS13150	SSF53649	Alkaline phosphatase-like
BER93_RS13160	SSF56935	Porins
BER93_RS13170	SSF50692	ADC-like
BER93_RS13170	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
BER93_RS13170	SSF54292	2Fe-2S ferredoxin-like
BER93_RS13170	SSF54862	4Fe-4S ferredoxins
BER93_RS13180	SSF49785	Galactose-binding domain-like
BER93_RS13180	SSF52743	Subtilisin-like
BER93_RS13205	SSF51445	(Trans)glycosidases
BER93_RS13215	SSF46785	"Winged helix" DNA-binding domain
BER93_RS13220	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
BER93_RS13220	SSF52374	Nucleotidylyl transferase
BER93_RS13245	SSF54001	Cysteine proteinases
BER93_RS13250	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS13255	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER93_RS13260	SSF141259	CarD-like
BER93_RS13260	SSF143517	TRCF domain-like
BER93_RS13260	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS13265	SSF48334	DNA repair protein MutS, domain III
BER93_RS13265	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS13265	SSF53150	DNA repair protein MutS, domain II
BER93_RS13265	SSF55271	DNA repair protein MutS, domain I
BER93_RS13270	SSF48113	Heme-dependent peroxidases
BER93_RS13285	SSF46689	Homeodomain-like
BER93_RS13305	SSF53254	Phosphoglycerate mutase-like
BER93_RS13350	SSF56784	HAD-like
BER93_RS13365	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS13375	SSF56003	Molybdenum cofactor-binding domain
BER93_RS13380	SSF55073	Nucleotide cyclase
BER93_RS13385	SSF50249	Nucleic acid-binding proteins
BER93_RS13395	SSF48576	Terpenoid synthases
BER93_RS13400	SSF53474	alpha/beta-Hydrolases
BER93_RS13405	SSF53244	MurD-like peptide ligases, peptide-binding domain
BER93_RS13405	SSF53623	MurD-like peptide ligases, catalytic domain
BER93_RS13420	SSF50621	Alanine racemase C-terminal domain-like
BER93_RS13420	SSF51419	PLP-binding barrel
BER93_RS13420	SSF53633	Carbamate kinase-like
BER93_RS13420	SSF55021	ACT-like
BER93_RS13425	SSF54506	Diaminopimelate epimerase-like
BER93_RS13430	SSF54506	Diaminopimelate epimerase-like
BER93_RS13440	SSF82784	OsmC-like
BER93_RS13445	SSF53671	Aspartate/ornithine carbamoyltransferase
BER93_RS13450	SSF53098	Ribonuclease H-like
BER93_RS13455	SSF143456	VC0467-like
BER93_RS13465	SSF48150	DNA-glycosylase
BER93_RS13480	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS13485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS13490	SSF51419	PLP-binding barrel
BER93_RS13495	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BER93_RS13495	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS13500	SSF47729	IHF-like DNA-binding proteins
BER93_RS13520	SSF82199	SET domain
BER93_RS13525	SSF46785	"Winged helix" DNA-binding domain
BER93_RS13530	SSF101960	Stabilizer of iron transporter SufD
BER93_RS13535	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS13540	SSF101960	Stabilizer of iron transporter SufD
BER93_RS13545	SSF53383	PLP-dependent transferases
BER93_RS13550	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER93_RS13555	SSF50022	ISP domain
BER93_RS13560	SSF56935	Porins
BER93_RS13565	SSF51197	Clavaminate synthase-like
BER93_RS13570	SSF81901	HCP-like
BER93_RS13575	SSF46689	Homeodomain-like
BER93_RS13585	SSF143631	ApbE-like
BER93_RS13590	SSF51182	RmlC-like cupins
BER93_RS13595	SSF47781	RuvA domain 2-like
BER93_RS13600	SSF53187	Zn-dependent exopeptidases
BER93_RS13610	SSF56112	Protein kinase-like (PK-like)
BER93_RS13615	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS13625	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS13640	SSF55326	PurM N-terminal domain-like
BER93_RS13640	SSF56042	PurM C-terminal domain-like
BER93_RS13645	SSF53328	Formyltransferase
BER93_RS13670	SSF55205	EPT/RTPC-like
BER93_RS13675	SSF82657	BolA-like
BER93_RS13680	SSF53697	SIS domain
BER93_RS13685	SSF56784	HAD-like
BER93_RS13700	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS13710	SSF69754	Ribosome binding protein Y (YfiA homologue)
BER93_RS13715	SSF55804	Phoshotransferase/anion transport protein
BER93_RS13720	SSF53795	PEP carboxykinase-like
BER93_RS13720	SSF75138	HprK N-terminal domain-like
BER93_RS13725	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS13730	SSF53062	PTS system fructose IIA component-like
BER93_RS13735	SSF55594	HPr-like
BER93_RS13740	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
BER93_RS13740	SSF51621	Phosphoenolpyruvate/pyruvate domain
BER93_RS13740	SSF52009	Phosphohistidine domain
BER93_RS13745	SSF158791	MgtE N-terminal domain-like
BER93_RS13745	SSF161093	MgtE membrane domain-like
BER93_RS13745	SSF54631	CBS-domain pair
BER93_RS13750	SSF46689	Homeodomain-like
BER93_RS13775	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS13780	SSF53067	Actin-like ATPase domain
BER93_RS13785	SSF56935	Porins
BER93_RS13790	SSF51445	(Trans)glycosidases
BER93_RS13795	SSF51445	(Trans)glycosidases
BER93_RS13800	SSF51445	(Trans)glycosidases
BER93_RS13800	SSF55545	beta-N-acetylhexosaminidase-like domain
BER93_RS13805	SSF49303	beta-Galactosidase/glucuronidase domain
BER93_RS13805	SSF49785	Galactose-binding domain-like
BER93_RS13805	SSF51445	(Trans)glycosidases
BER93_RS13810	SSF51445	(Trans)glycosidases
BER93_RS13810	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
BER93_RS13810	SSF56988	Anthrax protective antigen
BER93_RS13815	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS13815	SSF90123	ABC transporter transmembrane region
BER93_RS13820	SSF46689	Homeodomain-like
BER93_RS13825	SSF53098	Ribonuclease H-like
BER93_RS13830	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER93_RS13850	SSF53098	Ribonuclease H-like
BER93_RS13855	SSF46689	Homeodomain-like
BER93_RS13870	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER93_RS13870	SSF63737	Leukotriene A4 hydrolase N-terminal domain
BER93_RS13875	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS13885	SSF117892	Band 7/SPFH domain
BER93_RS13890	SSF117892	Band 7/SPFH domain
BER93_RS13895	SSF52172	CheY-like
BER93_RS13900	SSF46565	Chaperone J-domain
BER93_RS13900	SSF49493	HSP40/DnaJ peptide-binding domain
BER93_RS13905	SSF49764	HSP20-like chaperones
BER93_RS13910	SSF52833	Thioredoxin-like
BER93_RS13915	SSF47240	Ferritin-like
BER93_RS13950	SSF53590	Nucleoside hydrolase
BER93_RS13955	SSF56935	Porins
BER93_RS13960	SSF54506	Diaminopimelate epimerase-like
BER93_RS13965	SSF52016	LeuD/IlvD-like
BER93_RS13965	SSF53732	Aconitase iron-sulfur domain
BER93_RS13970	SSF48256	Citrate synthase
BER93_RS13975	SSF51621	Phosphoenolpyruvate/pyruvate domain
BER93_RS13980	SSF159800	PrpR receptor domain-like
BER93_RS13980	SSF46689	Homeodomain-like
BER93_RS13980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS14015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS14025	SSF56322	ADC synthase
BER93_RS14030	SSF53901	Thiolase-like
BER93_RS14035	SSF47336	ACP-like
BER93_RS14040	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS14045	SSF52151	FabD/lysophospholipase-like
BER93_RS14045	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
BER93_RS14050	SSF53901	Thiolase-like
BER93_RS14055	SSF57829	Zn-binding ribosomal proteins
BER93_RS14065	SSF52972	ITPase-like
BER93_RS14075	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS14085	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS14095	SSF54001	Cysteine proteinases
BER93_RS14105	SSF54197	HIT-like
BER93_RS14110	SSF111304	Recombination protein RecR
BER93_RS14115	SSF82607	YbaB-like
BER93_RS14120	SSF48019	post-AAA+ oligomerization domain-like
BER93_RS14120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS14135	SSF54690	Molybdopterin synthase subunit MoaE
BER93_RS14140	SSF54285	MoaD/ThiS
BER93_RS14145	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
BER93_RS14150	SSF102114	Radical SAM enzymes
BER93_RS14155	SSF56281	Metallo-hydrolase/oxidoreductase
BER93_RS14160	SSF56112	Protein kinase-like (PK-like)
BER93_RS14165	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER93_RS14180	SSF81606	PP2C-like
BER93_RS14185	SSF53098	Ribonuclease H-like
BER93_RS14190	SSF53098	Ribonuclease H-like
BER93_RS14195	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS14200	SSF56281	Metallo-hydrolase/oxidoreductase
BER93_RS14205	SSF53955	Lysozyme-like
BER93_RS14205	SSF54106	LysM domain
BER93_RS14215	SSF46946	S13-like H2TH domain
BER93_RS14215	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
BER93_RS14215	SSF81624	N-terminal domain of MutM-like DNA repair proteins
BER93_RS14220	SSF53474	alpha/beta-Hydrolases
BER93_RS14220	SSF82171	DPP6 N-terminal domain-like
BER93_RS14235	SSF109604	HD-domain/PDEase-like
BER93_RS14255	SSF89550	PHP domain-like
BER93_RS14260	SSF56672	DNA/RNA polymerases
BER93_RS14265	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS14270	SSF46785	"Winged helix" DNA-binding domain
BER93_RS14270	SSF51306	LexA/Signal peptidase
BER93_RS14305	SSF47741	CO dehydrogenase ISP C-domain like
BER93_RS14305	SSF54292	2Fe-2S ferredoxin-like
BER93_RS14310	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
BER93_RS14310	SSF56176	FAD-binding/transporter-associated domain-like
BER93_RS14315	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
BER93_RS14315	SSF56003	Molybdenum cofactor-binding domain
BER93_RS14320	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS14355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS14390	SSF102735	Trigger factor ribosome-binding domain
BER93_RS14390	SSF109998	Triger factor/SurA peptide-binding domain-like
BER93_RS14390	SSF54534	FKBP-like
BER93_RS14395	SSF52096	ClpP/crotonase
BER93_RS14400	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS14400	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
BER93_RS14405	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS14405	SSF54211	Ribosomal protein S5 domain 2-like
BER93_RS14405	SSF88697	PUA domain-like
BER93_RS14410	SSF47729	IHF-like DNA-binding proteins
BER93_RS14430	SSF109998	Triger factor/SurA peptide-binding domain-like
BER93_RS14430	SSF54534	FKBP-like
BER93_RS14455	SSF102114	Radical SAM enzymes
BER93_RS14460	SSF48452	TPR-like
BER93_RS14465	SSF103088	OmpA-like
BER93_RS14470	SSF52964	TolB, N-terminal domain
BER93_RS14470	SSF69304	Tricorn protease N-terminal domain
BER93_RS14475	SSF74653	TolA/TonB C-terminal domain
BER93_RS14490	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
BER93_RS14495	SSF46785	"Winged helix" DNA-binding domain
BER93_RS14495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS14505	SSF46929	DNA helicase RuvA subunit, C-terminal domain
BER93_RS14505	SSF47781	RuvA domain 2-like
BER93_RS14505	SSF50249	Nucleic acid-binding proteins
BER93_RS14510	SSF53098	Ribonuclease H-like
BER93_RS14515	SSF75625	YebC-like
BER93_RS14520	SSF53474	alpha/beta-Hydrolases
BER93_RS14525	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER93_RS14530	SSF50249	Nucleic acid-binding proteins
BER93_RS14530	SSF55261	GAD domain-like
BER93_RS14530	SSF55681	Class II aaRS and biotin synthetases
BER93_RS14545	SSF47090	PGBD-like
BER93_RS14545	SSF53955	Lysozyme-like
BER93_RS14550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS14555	SSF56935	Porins
BER93_RS14570	SSF56935	Porins
BER93_RS14575	SSF56935	Porins
BER93_RS14580	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS14600	SSF51556	Metallo-dependent hydrolases
BER93_RS14620	SSF158472	HAMP domain-like
BER93_RS14620	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BER93_RS14630	SSF53474	alpha/beta-Hydrolases
BER93_RS14635	SSF46894	C-terminal effector domain of the bipartite response regulators
BER93_RS14635	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
BER93_RS14645	SSF50494	Trypsin-like serine proteases
BER93_RS14670	SSF52440	PreATP-grasp domain
BER93_RS14670	SSF56059	Glutathione synthetase ATP-binding domain-like
BER93_RS14710	SSF50475	FMN-binding split barrel
BER93_RS14715	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS14720	SSF56796	Dehydroquinate synthase-like
BER93_RS14725	SSF142921	WGR domain-like
BER93_RS14730	SSF51726	UROD/MetE-like
BER93_RS14735	SSF103473	MFS general substrate transporter
BER93_RS14745	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS14745	SSF52172	CheY-like
BER93_RS14745	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS14745	SSF63829	Calcium-dependent phosphotriesterase
BER93_RS14750	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS14750	SSF52172	CheY-like
BER93_RS14750	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS14750	SSF63829	Calcium-dependent phosphotriesterase
BER93_RS14770	SSF52172	CheY-like
BER93_RS14775	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS14775	SSF55785	PYP-like sensor domain (PAS domain)
BER93_RS14775	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS14790	SSF55781	GAF domain-like
BER93_RS14805	SSF46689	Homeodomain-like
BER93_RS14805	SSF48452	TPR-like
BER93_RS14810	SSF46894	C-terminal effector domain of the bipartite response regulators
BER93_RS14810	SSF52172	CheY-like
BER93_RS14820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS14820	SSF54211	Ribosomal protein S5 domain 2-like
BER93_RS14825	SSF50156	PDZ domain-like
BER93_RS14835	SSF81452	Cytochrome c oxidase subunit III-like
BER93_RS14840	SSF81442	Cytochrome c oxidase subunit I-like
BER93_RS14845	SSF49503	Cupredoxins
BER93_RS14845	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
BER93_RS14865	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
BER93_RS14865	SSF50677	ValRS/IleRS/LeuRS editing domain
BER93_RS14865	SSF52374	Nucleotidylyl transferase
BER93_RS14870	SSF52374	Nucleotidylyl transferase
BER93_RS14870	SSF82114	Riboflavin kinase-like
BER93_RS14880	SSF46992	Ribosomal protein S20
BER93_RS14885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS14885	SSF82051	Obg GTP-binding protein N-terminal domain
BER93_RS14890	SSF110324	Ribosomal L27 protein-like
BER93_RS14895	SSF141091	L21p-like
BER93_RS14900	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS14905	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
BER93_RS14910	SSF110087	DR1885-like metal-binding protein
BER93_RS14915	SSF52096	ClpP/crotonase
BER93_RS14920	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
BER93_RS14940	SSF47473	EF-hand
BER93_RS14945	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER93_RS14950	SSF56219	DNase I-like
BER93_RS14970	SSF46689	Homeodomain-like
BER93_RS14975	SSF51246	Rudiment single hybrid motif
BER93_RS14975	SSF52440	PreATP-grasp domain
BER93_RS14975	SSF56059	Glutathione synthetase ATP-binding domain-like
BER93_RS14980	SSF117892	Band 7/SPFH domain
BER93_RS14990	SSF47598	Ribbon-helix-helix
BER93_RS15000	SSF55166	Hedgehog/DD-peptidase
BER93_RS15005	SSF48150	DNA-glycosylase
BER93_RS15015	SSF55961	Bet v1-like
BER93_RS15020	SSF46894	C-terminal effector domain of the bipartite response regulators
BER93_RS15020	SSF52172	CheY-like
BER93_RS15025	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS15030	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER93_RS15035	SSF63848	Cell-division inhibitor MinC, C-terminal domain
BER93_RS15040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS15045	SSF55229	Cell division protein MinE topological specificity domain
BER93_RS15055	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS15055	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS15060	SSF46894	C-terminal effector domain of the bipartite response regulators
BER93_RS15060	SSF52172	CheY-like
BER93_RS15070	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
BER93_RS15075	SSF53649	Alkaline phosphatase-like
BER93_RS15080	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER93_RS15095	SSF53383	PLP-dependent transferases
BER93_RS15100	SSF52317	Class I glutamine amidotransferase-like
BER93_RS15100	SSF56634	Heme-dependent catalase-like
BER93_RS15110	SSF46689	Homeodomain-like
BER93_RS15110	SSF55785	PYP-like sensor domain (PAS domain)
BER93_RS15150	SSF51621	Phosphoenolpyruvate/pyruvate domain
BER93_RS15155	SSF56935	Porins
BER93_RS15160	SSF56059	Glutathione synthetase ATP-binding domain-like
BER93_RS15170	SSF103473	MFS general substrate transporter
BER93_RS15180	SSF50621	Alanine racemase C-terminal domain-like
BER93_RS15180	SSF51419	PLP-binding barrel
BER93_RS15185	SSF56935	Porins
BER93_RS15195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS15195	SSF81923	Double Clp-N motif
BER93_RS15225	SSF69255	gp5 N-terminal domain-like
BER93_RS15225	SSF69279	Phage tail proteins
BER93_RS15250	SSF69255	gp5 N-terminal domain-like
BER93_RS15250	SSF69279	Phage tail proteins
BER93_RS15255	SSF53098	Ribonuclease H-like
BER93_RS15260	SSF46689	Homeodomain-like
BER93_RS15285	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS15320	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
BER93_RS15325	SSF69118	AhpD-like
BER93_RS15330	SSF52833	Thioredoxin-like
BER93_RS15340	SSF48452	TPR-like
BER93_RS15345	SSF46894	C-terminal effector domain of the bipartite response regulators
BER93_RS15345	SSF52172	CheY-like
BER93_RS15350	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS15350	SSF55785	PYP-like sensor domain (PAS domain)
BER93_RS15350	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS15355	SSF140356	PPK N-terminal domain-like
BER93_RS15355	SSF143724	PHP14-like
BER93_RS15355	SSF56024	Phospholipase D/nuclease
BER93_RS15360	SSF109604	HD-domain/PDEase-like
BER93_RS15360	SSF53067	Actin-like ATPase domain
BER93_RS15370	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
BER93_RS15375	SSF56300	Metallo-dependent phosphatases
BER93_RS15385	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER93_RS15395	SSF47240	Ferritin-like
BER93_RS15400	SSF53271	PRTase-like
BER93_RS15400	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
BER93_RS15410	SSF110997	Sporulation related repeat
BER93_RS15415	SSF53244	MurD-like peptide ligases, peptide-binding domain
BER93_RS15415	SSF53623	MurD-like peptide ligases, catalytic domain
BER93_RS15420	SSF52058	L domain-like
BER93_RS15440	SSF48208	Six-hairpin glycosidases
BER93_RS15445	SSF48208	Six-hairpin glycosidases
BER93_RS15450	SSF49785	Galactose-binding domain-like
BER93_RS15450	SSF51445	(Trans)glycosidases
BER93_RS15465	SSF56112	Protein kinase-like (PK-like)
BER93_RS15490	SSF116734	DNA methylase specificity domain
BER93_RS15495	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS15510	SSF116734	DNA methylase specificity domain
BER93_RS15515	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS15535	SSF46689	Homeodomain-like
BER93_RS15545	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER93_RS15550	SSF102220	DNA polymerase III psi subunit
BER93_RS15565	SSF52954	Class II aaRS ABD-related
BER93_RS15565	SSF55681	Class II aaRS and biotin synthetases
BER93_RS15565	SSF55826	YbaK/ProRS associated domain
BER93_RS15570	SSF81273	H-NS histone-like proteins
BER93_RS15585	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS15595	SSF159594	XCC0632-like
BER93_RS15605	SSF51905	FAD/NAD(P)-binding domain
BER93_RS15605	SSF54373	FAD-linked reductases, C-terminal domain
BER93_RS15605	SSF54862	4Fe-4S ferredoxins
BER93_RS15610	SSF56784	HAD-like
BER93_RS15615	SSF100950	NagB/RpiA/CoA transferase-like
BER93_RS15620	SSF100950	NagB/RpiA/CoA transferase-like
BER93_RS15625	SSF53738	Phosphoglucomutase, first 3 domains
BER93_RS15625	SSF55957	Phosphoglucomutase, C-terminal domain
BER93_RS15630	SSF51182	RmlC-like cupins
BER93_RS15630	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS15635	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS15640	SSF51182	RmlC-like cupins
BER93_RS15645	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS15650	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS15655	SSF52402	Adenine nucleotide alpha hydrolases-like
BER93_RS15660	SSF52402	Adenine nucleotide alpha hydrolases-like
BER93_RS15660	SSF52467	DHS-like NAD/FAD-binding domain
BER93_RS15665	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS15670	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS15690	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS15695	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS15705	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER93_RS15710	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER93_RS15715	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS15715	SSF56112	Protein kinase-like (PK-like)
BER93_RS15720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS15730	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER93_RS15735	SSF53383	PLP-dependent transferases
BER93_RS15740	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
BER93_RS15740	SSF54631	CBS-domain pair
BER93_RS15750	SSF103088	OmpA-like
BER93_RS15760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS15770	SSF47616	GST C-terminal domain-like
BER93_RS15770	SSF52833	Thioredoxin-like
BER93_RS15775	SSF56529	FAH
BER93_RS15780	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS15785	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
BER93_RS15795	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS15800	SSF55781	GAF domain-like
BER93_RS15820	SSF46689	Homeodomain-like
BER93_RS15825	SSF56784	HAD-like
BER93_RS15830	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
BER93_RS15830	SSF56672	DNA/RNA polymerases
BER93_RS15840	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
BER93_RS15845	SSF53901	Thiolase-like
BER93_RS15855	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER93_RS15860	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
BER93_RS15870	SSF49503	Cupredoxins
BER93_RS15880	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
BER93_RS15890	SSF53697	SIS domain
BER93_RS15890	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
BER93_RS15905	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS15910	SSF51126	Pectin lyase-like
BER93_RS15915	SSF51161	Trimeric LpxA-like enzymes
BER93_RS15915	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS15925	SSF48600	Chorismate mutase II
BER93_RS15930	SSF46604	Epsilon subunit of F1F0-ATP synthase C-terminal domain
BER93_RS15930	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
BER93_RS15935	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
BER93_RS15935	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
BER93_RS15935	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS15940	SSF52943	ATP synthase (F1-ATPase), gamma subunit
BER93_RS15945	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
BER93_RS15945	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
BER93_RS15945	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS15950	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
BER93_RS15955	SSF81573	F1F0 ATP synthase subunit B, membrane domain
BER93_RS15960	SSF81333	F1F0 ATP synthase subunit C
BER93_RS15965	SSF81336	F1F0 ATP synthase subunit A
BER93_RS15980	SSF51230	Single hybrid motif
BER93_RS15980	SSF51905	FAD/NAD(P)-binding domain
BER93_RS15980	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
BER93_RS15990	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
BER93_RS15990	SSF51230	Single hybrid motif
BER93_RS15990	SSF52777	CoA-dependent acyltransferases
BER93_RS16000	SSF52141	Uracil-DNA glycosylase-like
BER93_RS16005	SSF56925	OMPA-like
BER93_RS16015	SSF53850	Periplasmic binding protein-like II
BER93_RS16020	SSF161098	MetI-like
BER93_RS16025	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS16025	SSF55021	ACT-like
BER93_RS16030	SSF89963	YajQ-like
BER93_RS16075	SSF55120	Pseudouridine synthase
BER93_RS16080	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS16090	SSF50952	Soluble quinoprotein glucose dehydrogenase
BER93_RS16100	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS16100	SSF52172	CheY-like
BER93_RS16100	SSF55785	PYP-like sensor domain (PAS domain)
BER93_RS16100	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS16120	SSF50621	Alanine racemase C-terminal domain-like
BER93_RS16120	SSF51419	PLP-binding barrel
BER93_RS16125	SSF51905	FAD/NAD(P)-binding domain
BER93_RS16125	SSF54373	FAD-linked reductases, C-terminal domain
BER93_RS16130	SSF46785	"Winged helix" DNA-binding domain
BER93_RS16130	SSF54909	Dimeric alpha+beta barrel
BER93_RS16140	SSF51316	Mss4-like
BER93_RS16150	SSF103088	OmpA-like
BER93_RS16165	SSF55103	FAD-linked oxidases, C-terminal domain
BER93_RS16220	SSF81301	Nucleotidyltransferase
BER93_RS16220	SSF81891	Poly A polymerase C-terminal region-like
BER93_RS16230	SSF48435	Bacterial muramidases
BER93_RS16230	SSF53955	Lysozyme-like
BER93_RS16235	SSF48371	ARM repeat
BER93_RS16250	SSF53098	Ribonuclease H-like
BER93_RS16305	SSF52304	Type II 3-dehydroquinate dehydratase
BER93_RS16310	SSF51230	Single hybrid motif
BER93_RS16320	SSF51246	Rudiment single hybrid motif
BER93_RS16320	SSF52440	PreATP-grasp domain
BER93_RS16320	SSF56059	Glutathione synthetase ATP-binding domain-like
BER93_RS16325	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS16335	SSF47413	lambda repressor-like DNA-binding domains
BER93_RS16345	SSF46689	Homeodomain-like
BER93_RS16350	SSF69349	Phage fibre proteins
BER93_RS16355	SSF52335	Methylglyoxal synthase-like
BER93_RS16355	SSF53927	Cytidine deaminase-like
BER93_RS16360	SSF51246	Rudiment single hybrid motif
BER93_RS16360	SSF52440	PreATP-grasp domain
BER93_RS16360	SSF56059	Glutathione synthetase ATP-binding domain-like
BER93_RS16370	SSF103473	MFS general substrate transporter
BER93_RS16385	SSF103473	MFS general substrate transporter
BER93_RS16385	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
BER93_RS16405	SSF55811	Nudix
BER93_RS16410	SSF56349	DNA breaking-rejoining enzymes
BER93_RS16425	SSF46689	Homeodomain-like
BER93_RS16430	SSF53098	Ribonuclease H-like
BER93_RS16440	SSF56954	Outer membrane efflux proteins (OEP)
BER93_RS16460	SSF51726	UROD/MetE-like
BER93_RS16470	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS16475	SSF46785	"Winged helix" DNA-binding domain
BER93_RS16480	SSF143975	IlvD/EDD N-terminal domain-like
BER93_RS16480	SSF52016	LeuD/IlvD-like
BER93_RS16485	SSF51161	Trimeric LpxA-like enzymes
BER93_RS16500	SSF46689	Homeodomain-like
BER93_RS16505	SSF53098	Ribonuclease H-like
BER93_RS16520	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER93_RS16525	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
BER93_RS16525	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
BER93_RS16535	SSF53328	Formyltransferase
BER93_RS16535	SSF55021	ACT-like
BER93_RS16540	SSF51395	FMN-linked oxidoreductases
BER93_RS16545	SSF52467	DHS-like NAD/FAD-binding domain
BER93_RS16555	SSF103473	MFS general substrate transporter
BER93_RS16560	SSF51556	Metallo-dependent hydrolases
BER93_RS16575	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS16595	SSF55120	Pseudouridine synthase
BER93_RS16600	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS16605	SSF51430	NAD(P)-linked oxidoreductase
BER93_RS16610	SSF50129	GroES-like
BER93_RS16610	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS16615	SSF51430	NAD(P)-linked oxidoreductase
BER93_RS16625	SSF82784	OsmC-like
BER93_RS16635	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS16640	SSF53474	alpha/beta-Hydrolases
BER93_RS16665	SSF56219	DNase I-like
BER93_RS16670	SSF46626	Cytochrome c
BER93_RS16680	SSF46689	Homeodomain-like
BER93_RS16680	SSF48498	Tetracyclin repressor-like, C-terminal domain
BER93_RS16685	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
BER93_RS16685	SSF56645	Acyl-CoA dehydrogenase NM domain-like
BER93_RS16690	SSF52096	ClpP/crotonase
BER93_RS16695	SSF51230	Single hybrid motif
BER93_RS16695	SSF51246	Rudiment single hybrid motif
BER93_RS16695	SSF52440	PreATP-grasp domain
BER93_RS16695	SSF56059	Glutathione synthetase ATP-binding domain-like
BER93_RS16710	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS16735	SSF53098	Ribonuclease H-like
BER93_RS16745	SSF46689	Homeodomain-like
BER93_RS16755	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
BER93_RS16755	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
BER93_RS16755	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BER93_RS16760	SSF111369	HlyD-like secretion proteins
BER93_RS16765	SSF50447	Translation proteins
BER93_RS16765	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
BER93_RS16765	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS16770	SSF52402	Adenine nucleotide alpha hydrolases-like
BER93_RS16775	SSF52218	Flavoproteins
BER93_RS16775	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
BER93_RS16775	SSF63380	Riboflavin synthase domain-like
BER93_RS16780	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
BER93_RS16780	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
BER93_RS16785	SSF52402	Adenine nucleotide alpha hydrolases-like
BER93_RS16795	SSF56935	Porins
BER93_RS16805	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS16805	SSF55781	GAF domain-like
BER93_RS16805	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS16815	SSF46785	"Winged helix" DNA-binding domain
BER93_RS16815	SSF53850	Periplasmic binding protein-like II
BER93_RS16820	SSF53790	Tetrapyrrole methylase
BER93_RS16825	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
BER93_RS16830	SSF52949	Macro domain-like
BER93_RS16835	SSF51569	Aldolase
BER93_RS16840	SSF50800	PK beta-barrel domain-like
BER93_RS16840	SSF51621	Phosphoenolpyruvate/pyruvate domain
BER93_RS16840	SSF52935	PK C-terminal domain-like
BER93_RS16845	SSF56784	HAD-like
BER93_RS16850	SSF53748	Phosphoglycerate kinase
BER93_RS16875	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS16880	SSF53383	PLP-dependent transferases
BER93_RS16885	SSF52402	Adenine nucleotide alpha hydrolases-like
BER93_RS16890	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS16915	SSF46689	Homeodomain-like
BER93_RS16920	SSF53098	Ribonuclease H-like
BER93_RS16945	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS16945	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BER93_RS16950	SSF56925	OMPA-like
BER93_RS16955	SSF48537	Phospholipase C/P1 nuclease
BER93_RS16960	SSF56281	Metallo-hydrolase/oxidoreductase
BER93_RS16965	SSF53850	Periplasmic binding protein-like II
BER93_RS16970	SSF161098	MetI-like
BER93_RS16975	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS16990	SSF46785	"Winged helix" DNA-binding domain
BER93_RS17000	SSF141523	L,D-transpeptidase catalytic domain-like
BER93_RS17000	SSF47090	PGBD-like
BER93_RS17005	SSF51261	Duplicated hybrid motif
BER93_RS17010	SSF56935	Porins
BER93_RS17015	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
BER93_RS17015	SSF52922	TK C-terminal domain-like
BER93_RS17020	SSF118215	Proton glutamate symport protein
BER93_RS17030	SSF48452	TPR-like
BER93_RS17030	SSF53300	vWA-like
BER93_RS17035	SSF53300	vWA-like
BER93_RS17050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS17115	SSF82153	FAS1 domain
BER93_RS17120	SSF52141	Uracil-DNA glycosylase-like
BER93_RS17125	SSF102114	Radical SAM enzymes
BER93_RS17125	SSF47781	RuvA domain 2-like
BER93_RS17130	SSF51430	NAD(P)-linked oxidoreductase
BER93_RS17135	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS17140	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER93_RS17170	SSF47240	Ferritin-like
BER93_RS17175	SSF47240	Ferritin-like
BER93_RS17180	SSF143081	BB1717-like
BER93_RS17190	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
BER93_RS17190	SSF52738	Methylesterase CheB, C-terminal domain
BER93_RS17190	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS17190	SSF55785	PYP-like sensor domain (PAS domain)
BER93_RS17195	SSF52172	CheY-like
BER93_RS17205	SSF46689	Homeodomain-like
BER93_RS17205	SSF52172	CheY-like
BER93_RS17205	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS17230	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS17235	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS17240	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER93_RS17245	SSF51971	Nucleotide-binding domain
BER93_RS17245	SSF54373	FAD-linked reductases, C-terminal domain
BER93_RS17250	SSF51445	(Trans)glycosidases
BER93_RS17255	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS17255	SSF90123	ABC transporter transmembrane region
BER93_RS17270	SSF50129	GroES-like
BER93_RS17270	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS17300	SSF103088	OmpA-like
BER93_RS17310	SSF56935	Porins
BER93_RS17325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS17355	SSF52091	SpoIIaa-like
BER93_RS17380	SSF46689	Homeodomain-like
BER93_RS17395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS17400	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
BER93_RS17400	SSF52922	TK C-terminal domain-like
BER93_RS17420	SSF103190	Sensory domain-like
BER93_RS17420	SSF158472	HAMP domain-like
BER93_RS17420	SSF81606	PP2C-like
BER93_RS17425	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS17430	SSF52091	SpoIIaa-like
BER93_RS17445	SSF52151	FabD/lysophospholipase-like
BER93_RS17445	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
BER93_RS17460	SSF52096	ClpP/crotonase
BER93_RS17465	SSF52096	ClpP/crotonase
BER93_RS17480	SSF63380	Riboflavin synthase domain-like
BER93_RS17490	SSF101874	YceI-like
BER93_RS17495	SSF55469	FMN-dependent nitroreductase-like
BER93_RS17510	SSF81301	Nucleotidyltransferase
BER93_RS17510	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
BER93_RS17515	SSF51182	RmlC-like cupins
BER93_RS17520	SSF63829	Calcium-dependent phosphotriesterase
BER93_RS17530	SSF100950	NagB/RpiA/CoA transferase-like
BER93_RS17540	SSF51569	Aldolase
BER93_RS17560	SSF48592	GroEL equatorial domain-like
BER93_RS17560	SSF52029	GroEL apical domain-like
BER93_RS17560	SSF54849	GroEL-intermediate domain like
BER93_RS17565	SSF50129	GroES-like
BER93_RS17580	SSF54913	GlnB-like
BER93_RS17585	SSF52833	Thioredoxin-like
BER93_RS17585	SSF74863	Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
BER93_RS17615	SSF53098	Ribonuclease H-like
BER93_RS17620	SSF46689	Homeodomain-like
BER93_RS17625	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS17630	SSF51011	Glycosyl hydrolase domain
BER93_RS17630	SSF51445	(Trans)glycosidases
BER93_RS17630	SSF81296	E set domains
BER93_RS17640	SSF51445	(Trans)glycosidases
BER93_RS17645	SSF51445	(Trans)glycosidases
BER93_RS17650	SSF51445	(Trans)glycosidases
BER93_RS17650	SSF81296	E set domains
BER93_RS17655	SSF51011	Glycosyl hydrolase domain
BER93_RS17655	SSF51445	(Trans)glycosidases
BER93_RS17655	SSF81296	E set domains
BER93_RS17660	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER93_RS17665	SSF55073	Nucleotide cyclase
BER93_RS17670	SSF51445	(Trans)glycosidases
BER93_RS17680	SSF56112	Protein kinase-like (PK-like)
BER93_RS17685	SSF50182	Sm-like ribonucleoproteins
BER93_RS17685	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
BER93_RS17685	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
BER93_RS17690	SSF69754	Ribosome binding protein Y (YfiA homologue)
BER93_RS17705	SSF53271	PRTase-like
BER93_RS17710	SSF102114	Radical SAM enzymes
BER93_RS17715	SSF53383	PLP-dependent transferases
BER93_RS17725	SSF53474	alpha/beta-Hydrolases
BER93_RS17730	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS17740	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS17745	SSF51197	Clavaminate synthase-like
BER93_RS17760	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
BER93_RS17770	SSF51905	FAD/NAD(P)-binding domain
BER93_RS17785	SSF56112	Protein kinase-like (PK-like)
BER93_RS17790	SSF53474	alpha/beta-Hydrolases
BER93_RS17795	SSF100950	NagB/RpiA/CoA transferase-like
BER93_RS17795	SSF46785	"Winged helix" DNA-binding domain
BER93_RS17800	SSF51905	FAD/NAD(P)-binding domain
BER93_RS17800	SSF54373	FAD-linked reductases, C-terminal domain
BER93_RS17805	SSF81338	Aquaporin-like
BER93_RS17810	SSF53067	Actin-like ATPase domain
BER93_RS17820	SSF46689	Homeodomain-like
BER93_RS17825	SSF48498	Tetracyclin repressor-like, C-terminal domain
BER93_RS17835	SSF55486	Metalloproteases ("zincins"), catalytic domain
BER93_RS17845	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
BER93_RS17850	SSF110916	Peptidyl-tRNA hydrolase domain-like
BER93_RS17865	SSF52833	Thioredoxin-like
BER93_RS17880	SSF56112	Protein kinase-like (PK-like)
BER93_RS17900	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS17905	SSF56801	Acetyl-CoA synthetase-like
BER93_RS17915	SSF53474	alpha/beta-Hydrolases
BER93_RS17935	SSF89360	HesB-like domain
BER93_RS17955	SSF141868	EAL domain-like
BER93_RS17955	SSF52172	CheY-like
BER93_RS17955	SSF55073	Nucleotide cyclase
BER93_RS17960	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
BER93_RS17960	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS17960	SSF52172	CheY-like
BER93_RS17960	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS17965	SSF47240	Ferritin-like
BER93_RS17975	SSF55811	Nudix
BER93_RS17990	SSF54211	Ribosomal protein S5 domain 2-like
BER93_RS17995	SSF52161	Ribosomal protein L13
BER93_RS18000	SSF47240	Ferritin-like
BER93_RS18005	SSF103481	Multidrug resistance efflux transporter EmrE
BER93_RS18010	SSF56276	S-adenosylmethionine decarboxylase
BER93_RS18015	SSF46785	"Winged helix" DNA-binding domain
BER93_RS18015	SSF51206	cAMP-binding domain-like
BER93_RS18020	SSF56784	HAD-like
BER93_RS18025	SSF51366	Ribulose-phoshate binding barrel
BER93_RS18030	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
BER93_RS18030	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
BER93_RS18040	SSF52317	Class I glutamine amidotransferase-like
BER93_RS18060	SSF53383	PLP-dependent transferases
BER93_RS18065	SSF53383	PLP-dependent transferases
BER93_RS18075	SSF52317	Class I glutamine amidotransferase-like
BER93_RS18085	SSF52317	Class I glutamine amidotransferase-like
BER93_RS18090	SSF54368	Glutamine synthetase, N-terminal domain
BER93_RS18090	SSF55931	Glutamine synthetase/guanido kinase
BER93_RS18095	SSF56322	ADC synthase
BER93_RS18100	SSF111331	NAD kinase/diacylglycerol kinase-like
BER93_RS18105	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BER93_RS18110	SSF51366	Ribulose-phoshate binding barrel
BER93_RS18115	SSF56925	OMPA-like
BER93_RS18120	SSF46565	Chaperone J-domain
BER93_RS18125	SSF56104	SAICAR synthase-like
BER93_RS18155	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS18195	SSF56784	HAD-like
BER93_RS18200	SSF47473	EF-hand
BER93_RS18205	SSF47473	EF-hand
BER93_RS18220	SSF55166	Hedgehog/DD-peptidase
BER93_RS18225	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
BER93_RS18230	SSF54001	Cysteine proteinases
BER93_RS18235	SSF51604	Enolase C-terminal domain-like
BER93_RS18235	SSF54826	Enolase N-terminal domain-like
BER93_RS18265	SSF50952	Soluble quinoprotein glucose dehydrogenase
BER93_RS18270	SSF51445	(Trans)glycosidases
BER93_RS18270	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
BER93_RS18275	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
BER93_RS18280	SSF53067	Actin-like ATPase domain
BER93_RS18290	SSF89095	GatB/YqeY motif
BER93_RS18300	SSF117023	DNA primase DnaG, C-terminal domain
BER93_RS18300	SSF56731	DNA primase core
BER93_RS18300	SSF57783	Zinc beta-ribbon
BER93_RS18325	SSF52833	Thioredoxin-like
BER93_RS18340	SSF81452	Cytochrome c oxidase subunit III-like
BER93_RS18345	SSF110111	Ctag/Cox11
BER93_RS18350	SSF81442	Cytochrome c oxidase subunit I-like
BER93_RS18355	SSF49503	Cupredoxins
BER93_RS18355	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
BER93_RS18365	SSF51730	FAD-linked oxidoreductase
BER93_RS18365	SSF53720	ALDH-like
BER93_RS18365	SSF81935	N-terminal domain of bifunctional PutA protein
BER93_RS18370	SSF52374	Nucleotidylyl transferase
BER93_RS18370	SSF55174	Alpha-L RNA-binding motif
BER93_RS18375	SSF51261	Duplicated hybrid motif
BER93_RS18380	SSF53067	Actin-like ATPase domain
BER93_RS18390	SSF103473	MFS general substrate transporter
BER93_RS18400	SSF56219	DNase I-like
BER93_RS18405	SSF53271	PRTase-like
BER93_RS18415	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS18420	SSF110849	ParB/Sulfiredoxin
BER93_RS18435	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS18440	SSF53448	Nucleotide-diphospho-sugar transferases
BER93_RS18455	SSF53738	Phosphoglucomutase, first 3 domains
BER93_RS18455	SSF55957	Phosphoglucomutase, C-terminal domain
BER93_RS18460	SSF51283	dUTPase-like
BER93_RS18465	SSF102645	CoaB-like
BER93_RS18465	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
BER93_RS18470	SSF47781	RuvA domain 2-like
BER93_RS18475	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
BER93_RS18475	SSF52374	Nucleotidylyl transferase
BER93_RS18475	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
BER93_RS18480	SSF110997	Sporulation related repeat
BER93_RS18485	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS18515	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BER93_RS18520	SSF47336	ACP-like
BER93_RS18520	SSF52777	CoA-dependent acyltransferases
BER93_RS18520	SSF53474	alpha/beta-Hydrolases
BER93_RS18520	SSF56801	Acetyl-CoA synthetase-like
BER93_RS18530	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS18530	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS18535	SSF52172	CheY-like
BER93_RS18545	SSF51395	FMN-linked oxidoreductases
BER93_RS18560	SSF48403	Ankyrin repeat
BER93_RS18565	SSF56634	Heme-dependent catalase-like
BER93_RS18570	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS18580	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS18580	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
BER93_RS18590	SSF52218	Flavoproteins
BER93_RS18590	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
BER93_RS18590	SSF63380	Riboflavin synthase domain-like
BER93_RS18595	SSF51569	Aldolase
BER93_RS18640	SSF54368	Glutamine synthetase, N-terminal domain
BER93_RS18640	SSF55931	Glutamine synthetase/guanido kinase
BER93_RS18645	SSF54913	GlnB-like
BER93_RS18650	SSF111352	Ammonium transporter
BER93_RS18655	SSF47384	Homodimeric domain of signal transducing histidine kinase
BER93_RS18655	SSF55785	PYP-like sensor domain (PAS domain)
BER93_RS18655	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BER93_RS18660	SSF46689	Homeodomain-like
BER93_RS18660	SSF52172	CheY-like
BER93_RS18660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS18665	SSF49329	Cu,Zn superoxide dismutase-like
BER93_RS18670	SSF49329	Cu,Zn superoxide dismutase-like
BER93_RS18685	SSF48452	TPR-like
BER93_RS18695	SSF53474	alpha/beta-Hydrolases
BER93_RS18700	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
BER93_RS18705	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
BER93_RS18710	SSF56024	Phospholipase D/nuclease
BER93_RS18715	SSF101874	YceI-like
BER93_RS18720	SSF53254	Phosphoglycerate mutase-like
BER93_RS18725	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS18745	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
BER93_RS18745	SSF52922	TK C-terminal domain-like
BER93_RS18745	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
BER93_RS18750	SSF46785	"Winged helix" DNA-binding domain
BER93_RS18755	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS18760	SSF56436	C-type lectin-like
BER93_RS18765	SSF53383	PLP-dependent transferases
BER93_RS18770	SSF161098	MetI-like
BER93_RS18770	SSF53850	Periplasmic binding protein-like II
BER93_RS18775	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS18780	SSF47473	EF-hand
BER93_RS18785	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS18790	SSF46785	"Winged helix" DNA-binding domain
BER93_RS18790	SSF54909	Dimeric alpha+beta barrel
BER93_RS18795	SSF56534	Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
BER93_RS18800	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS18805	SSF51182	RmlC-like cupins
BER93_RS18815	SSF47413	lambda repressor-like DNA-binding domains
BER93_RS18815	SSF53822	Periplasmic binding protein-like I
BER93_RS18835	SSF56529	FAH
BER93_RS18840	SSF53474	alpha/beta-Hydrolases
BER93_RS18845	SSF53474	alpha/beta-Hydrolases
BER93_RS18850	SSF51430	NAD(P)-linked oxidoreductase
BER93_RS18855	SSF51011	Glycosyl hydrolase domain
BER93_RS18855	SSF51445	(Trans)glycosidases
BER93_RS18855	SSF81296	E set domains
BER93_RS18860	SSF51011	Glycosyl hydrolase domain
BER93_RS18860	SSF51445	(Trans)glycosidases
BER93_RS18860	SSF56112	Protein kinase-like (PK-like)
BER93_RS18865	SSF51445	(Trans)glycosidases
BER93_RS18935	SSF51445	(Trans)glycosidases
BER93_RS18945	SSF51445	(Trans)glycosidases
BER93_RS18950	SSF50129	GroES-like
BER93_RS18950	SSF51735	NAD(P)-binding Rossmann-fold domains
BER93_RS18955	SSF46548	alpha-helical ferredoxin
BER93_RS18955	SSF51971	Nucleotide-binding domain
BER93_RS18960	SSF51395	FMN-linked oxidoreductases
BER93_RS18960	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
BER93_RS18960	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
BER93_RS18975	SSF109604	HD-domain/PDEase-like
BER93_RS18980	SSF55681	Class II aaRS and biotin synthetases
BER93_RS18985	SSF160246	EspE N-terminal domain-like
BER93_RS18985	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS18990	SSF52317	Class I glutamine amidotransferase-like
BER93_RS19020	SSF53800	Chelatase
BER93_RS19025	SSF53474	alpha/beta-Hydrolases
BER93_RS19040	SSF52402	Adenine nucleotide alpha hydrolases-like
BER93_RS19050	SSF47413	lambda repressor-like DNA-binding domains
BER93_RS19050	SSF53822	Periplasmic binding protein-like I
BER93_RS19060	SSF51445	(Trans)glycosidases
BER93_RS19080	SSF53098	Ribonuclease H-like
BER93_RS19085	SSF46689	Homeodomain-like
BER93_RS19110	SSF48613	Heme oxygenase-like
BER93_RS19120	SSF103473	MFS general substrate transporter
BER93_RS19125	SSF47090	PGBD-like
BER93_RS19125	SSF53955	Lysozyme-like
BER93_RS19125	SSF74650	Galactose mutarotase-like
BER93_RS19135	SSF54427	NTF2-like
BER93_RS19180	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
BER93_RS19185	SSF103473	MFS general substrate transporter
BER93_RS19210	SSF53098	Ribonuclease H-like
BER93_RS19230	SSF47413	lambda repressor-like DNA-binding domains
BER93_RS19235	SSF143011	RelE-like
BER93_RS19240	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS19245	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS19245	SSF52980	Restriction endonuclease-like
BER93_RS19250	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS19250	SSF52980	Restriction endonuclease-like
BER93_RS19255	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS19275	SSF52091	SpoIIaa-like
BER93_RS19290	SSF52833	Thioredoxin-like
BER93_RS19320	SSF55073	Nucleotide cyclase
BER93_RS19320	SSF55781	GAF domain-like
BER93_RS19320	SSF55785	PYP-like sensor domain (PAS domain)
BER93_RS19325	SSF110738	Glycerate kinase I
BER93_RS19330	SSF103473	MFS general substrate transporter
BER93_RS19340	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BER93_RS19340	SSF88697	PUA domain-like
BER93_RS19350	SSF51695	PLC-like phosphodiesterases
BER93_RS19355	SSF46689	Homeodomain-like
BER93_RS19365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BER93_RS19375	SSF54211	Ribosomal protein S5 domain 2-like
BER93_RS19430	SSF56719	Type II DNA topoisomerase
BER93_RS19540	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
BER93_RS19560	SSF48295	TrpR-like
BER93_RS19560	SSF52540	P-loop containing nucleoside triphosphate hydrolases