AC028_RS00005 SM00448 cheY-homologous receiver domain AC028_RS00010 SM00138 Methyltransferase, chemotaxis proteins AC028_RS00015 SM00448 cheY-homologous receiver domain AC028_RS00020 SM00155 Phospholipase D. Active site motifs. AC028_RS00035 SM00855 Phosphoglycerate mutase family AC028_RS00080 SM01126 AC028_RS00080 AC028_RS00100 SM00248 ankyrin repeats AC028_RS00135 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AC028_RS00140 SM01092 CO dehydrogenase flavoprotein C-terminal domain AC028_RS00150 SM00829 Enoylreductase AC028_RS00155 SM00267 diguanylate cyclase AC028_RS00225 SM00732 Likely ribonuclease with RNase H fold. AC028_RS00260 SM00382 ATPases associated with a variety of cellular activities AC028_RS00275 SM00411 bacterial (prokaryotic) histone like domain AC028_RS00305 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain AC028_RS00320 SM00382 ATPases associated with a variety of cellular activities AC028_RS00350 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AC028_RS00355 SM00671 Sel1-like repeats. AC028_RS00475 SM00116 Domain in cystathionine beta-synthase and other proteins. AC028_RS00495 SM00382 ATPases associated with a variety of cellular activities AC028_RS00545 SM00924 MgtE intracellular N domain AC028_RS00580 SM00656 AC028_RS00580 AC028_RS00600 SM00421 helix_turn_helix, Lux Regulon AC028_RS00620 SM01126 AC028_RS00620 AC028_RS00655 SM00849 Metallo-beta-lactamase superfamily AC028_RS00670 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AC028_RS00720 SM00422 helix_turn_helix, mercury resistance AC028_RS00805 SM00387 Histidine kinase-like ATPases AC028_RS00805 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS00805 SM00448 cheY-homologous receiver domain AC028_RS00810 SM00387 Histidine kinase-like ATPases AC028_RS00810 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS00810 SM00448 cheY-homologous receiver domain AC028_RS00825 SM01126 AC028_RS00825 AC028_RS00835 SM00387 Histidine kinase-like ATPases AC028_RS00835 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS00835 SM00448 cheY-homologous receiver domain AC028_RS00840 SM00867 YceI-like domain AC028_RS00850 SM00867 YceI-like domain AC028_RS00910 SM00116 Domain in cystathionine beta-synthase and other proteins. AC028_RS01035 SM00812 Alpha-L-fucosidase AC028_RS01040 SM00636 AC028_RS01040 AC028_RS01055 SM00758 AC028_RS01055 AC028_RS01055 SM01217 AC028_RS01055 AC028_RS01080 SM01149 AC028_RS01080 AC028_RS01140 SM01126 AC028_RS01140 AC028_RS01155 SM00260 Two component signalling adaptor domain AC028_RS01165 SM00073 Histidine Phosphotransfer domain AC028_RS01165 SM00260 Two component signalling adaptor domain AC028_RS01165 SM00387 Histidine kinase-like ATPases AC028_RS01165 SM00448 cheY-homologous receiver domain AC028_RS01165 SM01231 AC028_RS01165 AC028_RS01170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS01175 SM00260 Two component signalling adaptor domain AC028_RS01180 SM00448 cheY-homologous receiver domain AC028_RS01185 SM00448 cheY-homologous receiver domain AC028_RS01210 SM00491 AC028_RS01210 AC028_RS01245 SM00954 Region found in RelA / SpoT proteins AC028_RS01300 SM00382 ATPases associated with a variety of cellular activities AC028_RS01300 SM00487 DEAD-like helicases superfamily AC028_RS01300 SM00490 helicase superfamily c-terminal domain AC028_RS01300 SM00847 Helicase associated domain (HA2) Add an annotation AC028_RS01310 SM00341 Helicase and RNase D C-terminal AC028_RS01310 SM00487 DEAD-like helicases superfamily AC028_RS01310 SM00490 helicase superfamily c-terminal domain AC028_RS01310 SM00956 AC028_RS01310 AC028_RS01320 SM00448 cheY-homologous receiver domain AC028_RS01350 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS01350 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS01365 SM00448 cheY-homologous receiver domain AC028_RS01370 SM00091 PAS domain AC028_RS01370 SM00911 HWE histidine kinase AC028_RS01425 SM00382 ATPases associated with a variety of cellular activities AC028_RS01440 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AC028_RS01475 SM00834 Putative regulatory protein AC028_RS01510 SM01126 AC028_RS01510 AC028_RS01530 SM00382 ATPases associated with a variety of cellular activities AC028_RS01635 SM00855 Phosphoglycerate mutase family AC028_RS01690 SM00382 ATPases associated with a variety of cellular activities AC028_RS01690 SM01086 C-terminal, D2-small domain, of ClpB protein AC028_RS01695 SM00382 ATPases associated with a variety of cellular activities AC028_RS01705 SM00062 Bacterial periplasmic substrate-binding proteins AC028_RS01720 SM01126 AC028_RS01720 AC028_RS01785 SM00564 beta-propeller repeat AC028_RS01795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS01845 SM00881 CoA binding domain AC028_RS01855 SM00387 Histidine kinase-like ATPases AC028_RS01855 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS01860 SM00382 ATPases associated with a variety of cellular activities AC028_RS01860 SM00448 cheY-homologous receiver domain AC028_RS01920 SM00387 Histidine kinase-like ATPases AC028_RS01920 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS01925 SM00448 cheY-homologous receiver domain AC028_RS01925 SM00862 Transcriptional regulatory protein, C terminal AC028_RS01940 SM00642 Alpha-amylase domain AC028_RS01950 SM01126 AC028_RS01950 AC028_RS01955 SM00528 Domain in histone-like proteins of HNS family AC028_RS01965 SM00318 Staphylococcal nuclease homologues AC028_RS01995 SM00869 Autotransporter beta-domain AC028_RS02050 SM00354 helix_turn _helix lactose operon repressor AC028_RS02080 SM00967 RNA 2'-O ribose methyltransferase substrate binding AC028_RS02150 SM01126 AC028_RS02150 AC028_RS02210 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AC028_RS02210 SM00387 Histidine kinase-like ATPases AC028_RS02290 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AC028_RS02315 SM00849 Metallo-beta-lactamase superfamily AC028_RS02330 SM00382 ATPases associated with a variety of cellular activities AC028_RS02390 SM01126 AC028_RS02390 AC028_RS02420 SM00861 Transketolase, pyrimidine binding domain AC028_RS02435 SM00028 Tetratricopeptide repeats AC028_RS02435 SM00327 von Willebrand factor (vWF) type A domain AC028_RS02440 SM00327 von Willebrand factor (vWF) type A domain AC028_RS02455 SM00382 ATPases associated with a variety of cellular activities AC028_RS02460 SM00965 Secretin and TonB N terminus short domain AC028_RS02480 SM00842 Cell division protein FtsA AC028_RS02510 SM00487 DEAD-like helicases superfamily AC028_RS02510 SM00490 helicase superfamily c-terminal domain AC028_RS02520 SM00858 AC028_RS02520 AC028_RS02530 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AC028_RS02545 SM01130 AC028_RS02545 AC028_RS02555 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AC028_RS02555 SM00954 Region found in RelA / SpoT proteins AC028_RS02560 SM01409 AC028_RS02560 AC028_RS02565 SM00072 Guanylate kinase homologues. AC028_RS02590 SM00729 Elongator protein 3, MiaB family, Radical SAM AC028_RS02610 SM01011 Aminopeptidase P, N-terminal domain AC028_RS02690 SM00028 Tetratricopeptide repeats AC028_RS02690 SM00382 ATPases associated with a variety of cellular activities AC028_RS02690 SM00421 helix_turn_helix, Lux Regulon AC028_RS02770 SM00464 Found in ATP-dependent protease La (LON) AC028_RS02820 SM00342 helix_turn_helix, arabinose operon control protein AC028_RS02825 SM00862 Transcriptional regulatory protein, C terminal AC028_RS02845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS02875 SM00917 LeuA allosteric (dimerisation) domain AC028_RS02880 SM01329 AC028_RS02880 AC028_RS02900 SM00267 diguanylate cyclase AC028_RS02955 SM00382 ATPases associated with a variety of cellular activities AC028_RS02960 SM01126 AC028_RS02960 AC028_RS02995 SM00450 Rhodanese Homology Domain AC028_RS03070 SM00028 Tetratricopeptide repeats AC028_RS03155 SM00345 helix_turn_helix gluconate operon transcriptional repressor AC028_RS03155 SM00866 AC028_RS03155 AC028_RS03220 SM00382 ATPases associated with a variety of cellular activities AC028_RS03250 SM01126 AC028_RS03250 AC028_RS03255 SM01211 AC028_RS03255 AC028_RS03375 SM01126 AC028_RS03375 AC028_RS03380 SM00528 Domain in histone-like proteins of HNS family AC028_RS03385 SM01126 AC028_RS03385 AC028_RS03435 SM00530 Helix-turn-helix XRE-family like proteins AC028_RS03570 SM00382 ATPases associated with a variety of cellular activities AC028_RS03810 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AC028_RS03815 SM00869 Autotransporter beta-domain AC028_RS03840 SM00267 diguanylate cyclase AC028_RS03870 SM00487 DEAD-like helicases superfamily AC028_RS03870 SM00490 helicase superfamily c-terminal domain AC028_RS03885 SM00357 Cold shock protein domain AC028_RS03920 SM01118 AC028_RS03920 AC028_RS03930 SM00448 cheY-homologous receiver domain AC028_RS03945 SM00358 Double-stranded RNA binding motif AC028_RS03945 SM00535 Ribonuclease III family AC028_RS03960 SM00838 Elongation factor G C-terminus AC028_RS03965 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AC028_RS03995 SM01126 AC028_RS03995 AC028_RS04035 SM00938 Nitrogen regulatory protein P-II AC028_RS04045 SM00382 ATPases associated with a variety of cellular activities AC028_RS04060 SM00052 Putative diguanylate phosphodiesterase AC028_RS04085 SM01126 AC028_RS04085 AC028_RS04100 SM00244 prohibitin homologues AC028_RS04145 SM00448 cheY-homologous receiver domain AC028_RS04145 SM00862 Transcriptional regulatory protein, C terminal AC028_RS04150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS04150 SM00387 Histidine kinase-like ATPases AC028_RS04150 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS04175 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AC028_RS04220 SM01060 AC028_RS04220 AC028_RS04235 SM00421 helix_turn_helix, Lux Regulon AC028_RS04235 SM00448 cheY-homologous receiver domain AC028_RS04250 SM00382 ATPases associated with a variety of cellular activities AC028_RS04295 SM00849 Metallo-beta-lactamase superfamily AC028_RS04325 SM00960 Roadblock/LC7 domain AC028_RS04400 SM00387 Histidine kinase-like ATPases AC028_RS04400 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS04405 SM00448 cheY-homologous receiver domain AC028_RS04405 SM00862 Transcriptional regulatory protein, C terminal AC028_RS04430 SM00248 ankyrin repeats AC028_RS04435 SM01060 AC028_RS04435 AC028_RS04445 SM00491 AC028_RS04445 AC028_RS04480 SM00477 DNA/RNA non-specific endonuclease AC028_RS04480 SM00892 DNA/RNA non-specific endonuclease AC028_RS04500 SM01004 Delta-aminolevulinic acid dehydratase AC028_RS04520 SM01126 AC028_RS04520 AC028_RS04545 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AC028_RS04565 SM00382 ATPases associated with a variety of cellular activities AC028_RS04575 SM00530 Helix-turn-helix XRE-family like proteins AC028_RS04605 SM00382 ATPases associated with a variety of cellular activities AC028_RS04670 SM00881 CoA binding domain AC028_RS04675 SM00116 Domain in cystathionine beta-synthase and other proteins. AC028_RS04675 SM00924 MgtE intracellular N domain AC028_RS04685 SM01057 Eukaryotic-type carbonic anhydrase AC028_RS04705 SM00226 Low molecular weight phosphatase family AC028_RS04710 SM00248 ankyrin repeats AC028_RS04720 SM00825 Beta-ketoacyl synthase AC028_RS04745 SM00822 AC028_RS04745 AC028_RS04790 SM00563 Phosphate acyltransferases AC028_RS04860 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AC028_RS04860 SM00474 3'-5' exonuclease AC028_RS04860 SM00475 5'-3' exonuclease AC028_RS04860 SM00482 DNA polymerase A domain AC028_RS04875 SM00912 haemagglutination activity domain AC028_RS04895 SM00331 Sigma factor PP2C-like phosphatases AC028_RS04895 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AC028_RS04930 SM00240 Forkhead associated domain AC028_RS04945 SM00028 Tetratricopeptide repeats AC028_RS04955 SM00220 Serine/Threonine protein kinases, catalytic domain AC028_RS04980 SM00965 Secretin and TonB N terminus short domain AC028_RS04990 SM00915 Jacalin-like lectin domain AC028_RS05015 SM01126 AC028_RS05015 AC028_RS05030 SM01126 AC028_RS05030 AC028_RS05090 SM00642 Alpha-amylase domain AC028_RS05095 SM00642 Alpha-amylase domain AC028_RS05100 SM00642 Alpha-amylase domain AC028_RS05150 SM00354 helix_turn _helix lactose operon repressor AC028_RS05195 SM00344 helix_turn_helix ASNC type AC028_RS05215 SM00382 ATPases associated with a variety of cellular activities AC028_RS05230 SM00382 ATPases associated with a variety of cellular activities AC028_RS05285 SM00855 Phosphoglycerate mutase family AC028_RS05290 SM00867 YceI-like domain AC028_RS05295 SM00155 Phospholipase D. Active site motifs. AC028_RS05305 SM00563 Phosphate acyltransferases AC028_RS05320 SM00028 Tetratricopeptide repeats AC028_RS05330 SM00829 Enoylreductase AC028_RS05350 SM01230 AC028_RS05350 AC028_RS05355 SM00938 Nitrogen regulatory protein P-II AC028_RS05365 SM00387 Histidine kinase-like ATPases AC028_RS05365 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS05370 SM00382 ATPases associated with a variety of cellular activities AC028_RS05370 SM00448 cheY-homologous receiver domain AC028_RS05435 SM00450 Rhodanese Homology Domain AC028_RS05465 SM01126 AC028_RS05465 AC028_RS05475 SM00387 Histidine kinase-like ATPases AC028_RS05475 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS05480 SM00382 ATPases associated with a variety of cellular activities AC028_RS05480 SM00448 cheY-homologous receiver domain AC028_RS05540 SM00028 Tetratricopeptide repeats AC028_RS05540 SM00862 Transcriptional regulatory protein, C terminal AC028_RS05610 SM00563 Phosphate acyltransferases AC028_RS05655 SM00342 helix_turn_helix, arabinose operon control protein AC028_RS05680 SM00100 Cyclic nucleotide-monophosphate binding domain AC028_RS05680 SM00267 diguanylate cyclase AC028_RS05715 SM00878 Biotin carboxylase C-terminal domain AC028_RS05740 SM00953 AC028_RS05740 AC028_RS05780 SM00833 Cobalamin synthesis protein cobW C-terminal domain AC028_RS05805 SM00347 helix_turn_helix multiple antibiotic resistance protein AC028_RS05840 SM00829 Enoylreductase AC028_RS05870 SM00487 DEAD-like helicases superfamily AC028_RS05870 SM00490 helicase superfamily c-terminal domain AC028_RS05870 SM00847 Helicase associated domain (HA2) Add an annotation AC028_RS05995 SM00422 helix_turn_helix, mercury resistance AC028_RS06030 SM00448 cheY-homologous receiver domain AC028_RS06030 SM00862 Transcriptional regulatory protein, C terminal AC028_RS06035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS06035 SM00387 Histidine kinase-like ATPases AC028_RS06035 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS06170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AC028_RS06175 SM00347 helix_turn_helix multiple antibiotic resistance protein AC028_RS06195 SM00342 helix_turn_helix, arabinose operon control protein AC028_RS06225 SM00420 helix_turn_helix, Deoxyribose operon repressor AC028_RS06225 SM01134 AC028_RS06225 AC028_RS06240 SM00882 Coenzyme A transferase AC028_RS06245 SM00882 Coenzyme A transferase AC028_RS06265 SM00998 Adenylosuccinate lyase C-terminus AC028_RS06285 SM00346 helix_turn_helix isocitrate lyase regulation AC028_RS06290 SM00090 RIO-like kinase AC028_RS06310 SM01228 AC028_RS06310 AC028_RS06365 SM00729 Elongator protein 3, MiaB family, Radical SAM AC028_RS06365 SM00876 Biotin and Thiamin Synthesis associated domain AC028_RS06390 SM01126 AC028_RS06390 AC028_RS06395 SM01126 AC028_RS06395 AC028_RS06400 SM00267 diguanylate cyclase AC028_RS06405 SM01126 AC028_RS06405 AC028_RS06410 SM00448 cheY-homologous receiver domain AC028_RS06430 SM00829 Enoylreductase AC028_RS06435 SM00563 Phosphate acyltransferases AC028_RS06450 SM00354 helix_turn _helix lactose operon repressor AC028_RS06470 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AC028_RS06510 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AC028_RS06510 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS06525 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AC028_RS06525 SM01232 AC028_RS06525 AC028_RS06560 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AC028_RS06560 SM00091 PAS domain AC028_RS06615 SM00347 helix_turn_helix multiple antibiotic resistance protein AC028_RS06665 SM00155 Phospholipase D. Active site motifs. AC028_RS06700 SM01126 AC028_RS06700 AC028_RS06710 SM00796 Allophanate hydrolase subunit 1 AC028_RS06710 SM00797 Allophanate hydrolase subunit 2 AC028_RS06710 SM00878 Biotin carboxylase C-terminal domain AC028_RS06715 SM01126 AC028_RS06715 AC028_RS06720 SM01126 AC028_RS06720 AC028_RS06750 SM00822 AC028_RS06750 AC028_RS06810 SM00237 Domains in Na-Ca exchangers and integrin-beta4 AC028_RS06810 SM00736 Dystroglycan-type cadherin-like domains. AC028_RS06810 SM00869 Autotransporter beta-domain AC028_RS06840 SM00382 ATPases associated with a variety of cellular activities AC028_RS06920 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AC028_RS06920 SM00091 PAS domain AC028_RS06950 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AC028_RS06980 SM00014 Acid phosphatase homologues AC028_RS07015 SM00382 ATPases associated with a variety of cellular activities AC028_RS07015 SM00760 Bacterial dnaA protein helix-turn-helix domain AC028_RS07020 SM00480 DNA polymerase III beta subunit AC028_RS07030 SM00387 Histidine kinase-like ATPases AC028_RS07030 SM00433 TopoisomeraseII AC028_RS07045 SM00028 Tetratricopeptide repeats AC028_RS07085 SM00155 Phospholipase D. Active site motifs. AC028_RS07105 SM00729 Elongator protein 3, MiaB family, Radical SAM AC028_RS07125 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AC028_RS07125 SM00245 tail specific protease AC028_RS07180 SM00829 Enoylreductase AC028_RS07190 SM01126 AC028_RS07190 AC028_RS07200 SM00944 Pro-kumamolisin, activation domain AC028_RS07225 SM00867 YceI-like domain AC028_RS07280 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AC028_RS07290 SM00345 helix_turn_helix gluconate operon transcriptional repressor AC028_RS07290 SM00895 AC028_RS07290 AC028_RS07315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS07315 SM00331 Sigma factor PP2C-like phosphatases AC028_RS07340 SM01126 AC028_RS07340 AC028_RS07350 SM01126 AC028_RS07350 AC028_RS07355 SM00382 ATPases associated with a variety of cellular activities AC028_RS07365 SM00836 DALR anticodon binding domain AC028_RS07370 SM00382 ATPases associated with a variety of cellular activities AC028_RS07390 SM01126 AC028_RS07390 AC028_RS07450 SM00564 beta-propeller repeat AC028_RS07485 SM00091 PAS domain AC028_RS07485 SM00387 Histidine kinase-like ATPases AC028_RS07485 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS07485 SM00448 cheY-homologous receiver domain AC028_RS07495 SM00346 helix_turn_helix isocitrate lyase regulation AC028_RS07510 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AC028_RS07565 SM00421 helix_turn_helix, Lux Regulon AC028_RS07565 SM00448 cheY-homologous receiver domain AC028_RS07715 SM00155 Phospholipase D. Active site motifs. AC028_RS07735 SM01266 AC028_RS07735 AC028_RS07745 SM00342 helix_turn_helix, arabinose operon control protein AC028_RS07785 SM00382 ATPases associated with a variety of cellular activities AC028_RS07790 SM01126 AC028_RS07790 AC028_RS07825 SM00267 diguanylate cyclase AC028_RS07835 SM00642 Alpha-amylase domain AC028_RS07840 SM00642 Alpha-amylase domain AC028_RS07850 SM00642 Alpha-amylase domain AC028_RS07860 SM00642 Alpha-amylase domain AC028_RS07910 SM00822 AC028_RS07910 AC028_RS07920 SM00487 DEAD-like helicases superfamily AC028_RS07935 SM00861 Transketolase, pyrimidine binding domain AC028_RS07945 SM00237 Domains in Na-Ca exchangers and integrin-beta4 AC028_RS07965 SM00347 helix_turn_helix multiple antibiotic resistance protein AC028_RS08050 SM00271 DnaJ molecular chaperone homology domain AC028_RS08070 SM00046 Diacylglycerol kinase catalytic domain (presumed) AC028_RS08090 SM00903 Flavin reductase like domain AC028_RS08110 SM00100 Cyclic nucleotide-monophosphate binding domain AC028_RS08110 SM00419 helix_turn_helix, cAMP Regulatory protein AC028_RS08165 SM00073 Histidine Phosphotransfer domain AC028_RS08165 SM00387 Histidine kinase-like ATPases AC028_RS08165 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS08165 SM00448 cheY-homologous receiver domain AC028_RS08170 SM00052 Putative diguanylate phosphodiesterase AC028_RS08170 SM00267 diguanylate cyclase AC028_RS08170 SM00448 cheY-homologous receiver domain AC028_RS08230 SM00563 Phosphate acyltransferases AC028_RS08250 SM01209 AC028_RS08250 AC028_RS08250 SM01210 AC028_RS08250 AC028_RS08260 SM00798 AICARFT/IMPCHase bienzyme AC028_RS08260 SM00851 MGS-like domain AC028_RS08275 SM00195 Dual specificity phosphatase, catalytic domain AC028_RS08325 SM00530 Helix-turn-helix XRE-family like proteins AC028_RS08355 SM00878 Biotin carboxylase C-terminal domain AC028_RS08395 SM00883 Chaperonin 10 Kd subunit AC028_RS08460 SM01126 AC028_RS08460 AC028_RS08470 SM01126 AC028_RS08470 AC028_RS08580 SM00487 DEAD-like helicases superfamily AC028_RS08580 SM00490 helicase superfamily c-terminal domain AC028_RS08605 SM00822 AC028_RS08605 AC028_RS08610 SM00822 AC028_RS08610 AC028_RS08660 SM01126 AC028_RS08660 AC028_RS08670 SM01126 AC028_RS08670 AC028_RS08685 SM01126 AC028_RS08685 AC028_RS08725 SM01126 AC028_RS08725 AC028_RS08815 SM01126 AC028_RS08815 AC028_RS08910 SM00862 Transcriptional regulatory protein, C terminal AC028_RS08930 SM00421 helix_turn_helix, Lux Regulon AC028_RS08930 SM00448 cheY-homologous receiver domain AC028_RS08955 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AC028_RS09005 SM01126 AC028_RS09005 AC028_RS09020 SM01126 AC028_RS09020 AC028_RS09025 SM01126 AC028_RS09025 AC028_RS09075 SM01126 AC028_RS09075 AC028_RS09085 SM01126 AC028_RS09085 AC028_RS09170 SM00354 helix_turn _helix lactose operon repressor AC028_RS09185 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AC028_RS09195 SM00758 AC028_RS09195 AC028_RS09235 SM00612 AC028_RS09235 AC028_RS09265 SM01007 Class II Aldolase and Adducin N-terminal domain AC028_RS09295 SM00633 Glycosyl hydrolase family 10 AC028_RS09320 SM00633 Glycosyl hydrolase family 10 AC028_RS09370 SM01126 AC028_RS09370 AC028_RS09380 SM01126 AC028_RS09380 AC028_RS09390 SM00387 Histidine kinase-like ATPases AC028_RS09390 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS09395 SM00369 Leucine-rich repeats, typical (most populated) subfamily AC028_RS09495 SM00382 ATPases associated with a variety of cellular activities AC028_RS09540 SM01126 AC028_RS09540 AC028_RS09550 SM01126 AC028_RS09550 AC028_RS09555 SM01086 C-terminal, D2-small domain, of ClpB protein AC028_RS09560 SM01126 AC028_RS09560 AC028_RS09570 SM00822 AC028_RS09570 AC028_RS09575 SM00342 helix_turn_helix, arabinose operon control protein AC028_RS09650 SM00267 diguanylate cyclase AC028_RS09730 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AC028_RS09730 SM01232 AC028_RS09730 AC028_RS09745 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AC028_RS09755 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AC028_RS09755 SM00091 PAS domain AC028_RS09755 SM00267 diguanylate cyclase AC028_RS09765 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS09765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS09765 SM01049 AC028_RS09765 AC028_RS09770 SM00637 AC028_RS09770 AC028_RS09780 SM00267 diguanylate cyclase AC028_RS09815 SM00448 cheY-homologous receiver domain AC028_RS09815 SM00850 LytTr DNA-binding domain AC028_RS09900 SM00382 ATPases associated with a variety of cellular activities AC028_RS09900 SM01086 C-terminal, D2-small domain, of ClpB protein AC028_RS09930 SM00267 diguanylate cyclase AC028_RS09935 SM01263 AC028_RS09935 AC028_RS09955 SM00564 beta-propeller repeat AC028_RS09960 SM00062 Bacterial periplasmic substrate-binding proteins AC028_RS09960 SM00248 ankyrin repeats AC028_RS09975 SM00829 Enoylreductase AC028_RS09985 SM00382 ATPases associated with a variety of cellular activities AC028_RS09995 SM00268 Actin AC028_RS10020 SM00710 Parallel beta-helix repeats AC028_RS10040 SM00936 Penicillin-binding protein 5, C-terminal domain AC028_RS10060 SM00729 Elongator protein 3, MiaB family, Radical SAM AC028_RS10065 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AC028_RS10065 SM00245 tail specific protease AC028_RS10120 SM01350 AC028_RS10120 AC028_RS10130 SM00749 bacterial OsmY and nodulation domain AC028_RS10135 SM00387 Histidine kinase-like ATPases AC028_RS10135 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS10140 SM00448 cheY-homologous receiver domain AC028_RS10145 SM00387 Histidine kinase-like ATPases AC028_RS10145 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS10145 SM00448 cheY-homologous receiver domain AC028_RS10175 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AC028_RS10200 SM00382 ATPases associated with a variety of cellular activities AC028_RS10270 SM00345 helix_turn_helix gluconate operon transcriptional repressor AC028_RS10270 SM00866 AC028_RS10270 AC028_RS10280 SM00354 helix_turn _helix lactose operon repressor AC028_RS10355 SM00849 Metallo-beta-lactamase superfamily AC028_RS10360 SM00342 helix_turn_helix, arabinose operon control protein AC028_RS10375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS10375 SM00387 Histidine kinase-like ATPases AC028_RS10375 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS10380 SM00448 cheY-homologous receiver domain AC028_RS10380 SM00862 Transcriptional regulatory protein, C terminal AC028_RS10400 SM00829 Enoylreductase AC028_RS10420 SM00345 helix_turn_helix gluconate operon transcriptional repressor AC028_RS10445 SM00382 ATPases associated with a variety of cellular activities AC028_RS10510 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AC028_RS10540 SM00387 Histidine kinase-like ATPases AC028_RS10540 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS10545 SM00448 cheY-homologous receiver domain AC028_RS10545 SM00862 Transcriptional regulatory protein, C terminal AC028_RS10655 SM00842 Cell division protein FtsA AC028_RS10660 SM00864 Tubulin/FtsZ family, GTPase domain AC028_RS10660 SM00865 Tubulin/FtsZ family, C-terminal domain AC028_RS10680 SM00957 SecA DEAD-like domain AC028_RS10680 SM00958 SecA preprotein cross-linking domain AC028_RS10710 SM00829 Enoylreductase AC028_RS10715 SM00944 Pro-kumamolisin, activation domain AC028_RS10735 SM00642 Alpha-amylase domain AC028_RS10775 SM00996 S-adenosyl-L-homocysteine hydrolase AC028_RS10775 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AC028_RS10785 SM01126 AC028_RS10785 AC028_RS10910 SM00382 ATPases associated with a variety of cellular activities AC028_RS10930 SM00382 ATPases associated with a variety of cellular activities AC028_RS10940 SM00448 cheY-homologous receiver domain AC028_RS10940 SM00862 Transcriptional regulatory protein, C terminal AC028_RS10945 SM00387 Histidine kinase-like ATPases AC028_RS10945 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS10995 SM00382 ATPases associated with a variety of cellular activities AC028_RS11005 SM00382 ATPases associated with a variety of cellular activities AC028_RS11065 SM00382 ATPases associated with a variety of cellular activities AC028_RS11080 SM00650 Ribosomal RNA adenine dimethylases AC028_RS11145 SM00345 helix_turn_helix gluconate operon transcriptional repressor AC028_RS11145 SM00895 AC028_RS11145 AC028_RS11185 SM00347 helix_turn_helix multiple antibiotic resistance protein AC028_RS11260 SM00448 cheY-homologous receiver domain AC028_RS11265 SM00387 Histidine kinase-like ATPases AC028_RS11265 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS11265 SM00448 cheY-homologous receiver domain AC028_RS11270 SM00421 helix_turn_helix, Lux Regulon AC028_RS11340 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AC028_RS11340 SM00475 5'-3' exonuclease AC028_RS11370 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AC028_RS11370 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AC028_RS11490 SM00852 Probable molybdopterin binding domain AC028_RS11495 SM00028 Tetratricopeptide repeats AC028_RS11500 SM00937 AC028_RS11500 AC028_RS11510 SM00028 Tetratricopeptide repeats AC028_RS11530 SM01400 AC028_RS11530 AC028_RS11580 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AC028_RS11580 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AC028_RS11585 SM00649 Ribosomal protein L11/L12 AC028_RS11610 SM00663 RNA polymerase I subunit A N-terminus AC028_RS11625 SM00838 Elongation factor G C-terminus AC028_RS11625 SM00889 Elongation factor G, domain IV AC028_RS11635 SM01403 AC028_RS11635 AC028_RS11655 SM01382 AC028_RS11655 AC028_RS11655 SM01383 AC028_RS11655 AC028_RS11670 SM00322 K homology RNA-binding domain AC028_RS11690 SM01374 AC028_RS11690 AC028_RS11695 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AC028_RS11755 SM00363 S4 RNA-binding domain AC028_RS11755 SM01390 AC028_RS11755 AC028_RS11760 SM00662 RNA polymerases D AC028_RS11815 SM00838 Elongation factor G C-terminus AC028_RS11850 SM00829 Enoylreductase AC028_RS11900 SM00382 ATPases associated with a variety of cellular activities AC028_RS11910 SM00829 Enoylreductase AC028_RS11930 SM00855 Phosphoglycerate mutase family AC028_RS11980 SM00014 Acid phosphatase homologues AC028_RS12000 SM00387 Histidine kinase-like ATPases AC028_RS12000 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS12005 SM00448 cheY-homologous receiver domain AC028_RS12005 SM00862 Transcriptional regulatory protein, C terminal AC028_RS12025 SM01329 AC028_RS12025 AC028_RS12055 SM01126 AC028_RS12055 AC028_RS12080 SM00382 ATPases associated with a variety of cellular activities AC028_RS12080 SM00994 ClpX C4-type zinc finger AC028_RS12080 SM01086 C-terminal, D2-small domain, of ClpB protein AC028_RS12085 SM00382 ATPases associated with a variety of cellular activities AC028_RS12085 SM00464 Found in ATP-dependent protease La (LON) AC028_RS12090 SM00411 bacterial (prokaryotic) histone like domain AC028_RS12115 SM00257 Lysin motif AC028_RS12120 SM00849 Metallo-beta-lactamase superfamily AC028_RS12135 SM00479 AC028_RS12135 AC028_RS12140 SM00331 Sigma factor PP2C-like phosphatases AC028_RS12140 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AC028_RS12165 SM00849 Metallo-beta-lactamase superfamily AC028_RS12170 SM00729 Elongator protein 3, MiaB family, Radical SAM AC028_RS12205 SM00382 ATPases associated with a variety of cellular activities AC028_RS12215 SM00493 AC028_RS12215 AC028_RS12230 SM00460 Transglutaminase/protease-like homologues AC028_RS12240 SM00382 ATPases associated with a variety of cellular activities AC028_RS12290 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AC028_RS12295 SM00822 AC028_RS12295 AC028_RS12305 SM00825 Beta-ketoacyl synthase AC028_RS12340 SM00382 ATPases associated with a variety of cellular activities AC028_RS12385 SM01359 AC028_RS12385 AC028_RS12385 SM01360 AC028_RS12385 AC028_RS12425 SM00271 DnaJ molecular chaperone homology domain AC028_RS12430 SM00448 cheY-homologous receiver domain AC028_RS12435 SM00244 prohibitin homologues AC028_RS12440 SM00244 prohibitin homologues AC028_RS12445 SM01321 AC028_RS12445 AC028_RS12450 SM00788 Adenylosuccinate synthetase AC028_RS12460 SM00822 AC028_RS12460 AC028_RS12535 SM00487 DEAD-like helicases superfamily AC028_RS12545 SM00220 Serine/Threonine protein kinases, catalytic domain AC028_RS12565 SM00855 Phosphoglycerate mutase family AC028_RS12575 SM01126 AC028_RS12575 AC028_RS12630 SM00052 Putative diguanylate phosphodiesterase AC028_RS12640 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AC028_RS12650 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AC028_RS12655 SM01092 CO dehydrogenase flavoprotein C-terminal domain AC028_RS12670 SM00974 AC028_RS12670 AC028_RS12690 SM00966 SpoVT / AbrB like domain AC028_RS12715 SM00481 DNA polymerase alpha chain like domain AC028_RS12725 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AC028_RS12760 SM01126 AC028_RS12760 AC028_RS12775 SM00091 PAS domain AC028_RS12775 SM00342 helix_turn_helix, arabinose operon control protein AC028_RS12790 SM01060 AC028_RS12790 AC028_RS12840 SM00448 cheY-homologous receiver domain AC028_RS12840 SM00862 Transcriptional regulatory protein, C terminal AC028_RS12845 SM00387 Histidine kinase-like ATPases AC028_RS12845 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS12885 SM00421 helix_turn_helix, Lux Regulon AC028_RS12885 SM00448 cheY-homologous receiver domain AC028_RS12900 SM00478 endonuclease III AC028_RS12920 SM00244 prohibitin homologues AC028_RS13005 SM00904 Riboflavin kinase AC028_RS13070 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AC028_RS13075 SM00382 ATPases associated with a variety of cellular activities AC028_RS13085 SM00862 Transcriptional regulatory protein, C terminal AC028_RS13090 SM00342 helix_turn_helix, arabinose operon control protein AC028_RS13115 SM00387 Histidine kinase-like ATPases AC028_RS13125 SM00387 Histidine kinase-like ATPases AC028_RS13125 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS13130 SM00387 Histidine kinase-like ATPases AC028_RS13130 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS13130 SM00448 cheY-homologous receiver domain AC028_RS13160 SM00387 Histidine kinase-like ATPases AC028_RS13160 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS13160 SM00448 cheY-homologous receiver domain AC028_RS13170 SM00138 Methyltransferase, chemotaxis proteins AC028_RS13175 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AC028_RS13175 SM00387 Histidine kinase-like ATPases AC028_RS13175 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS13175 SM00448 cheY-homologous receiver domain AC028_RS13180 SM00091 PAS domain AC028_RS13180 SM00387 Histidine kinase-like ATPases AC028_RS13180 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS13185 SM00448 cheY-homologous receiver domain AC028_RS13195 SM00813 Alpha-L-arabinofuranosidase C-terminus AC028_RS13210 SM00382 ATPases associated with a variety of cellular activities AC028_RS13210 SM00962 SRP54-type protein, GTPase domain AC028_RS13210 SM00963 SRP54-type protein, helical bundle domain AC028_RS13270 SM00363 S4 RNA-binding domain AC028_RS13285 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AC028_RS13285 SM00534 ATPase domain of DNA mismatch repair MUTS family AC028_RS13325 SM00812 Alpha-L-fucosidase AC028_RS13350 SM00530 Helix-turn-helix XRE-family like proteins AC028_RS13415 SM01126 AC028_RS13415 AC028_RS13450 SM00836 DALR anticodon binding domain AC028_RS13450 SM01016 Arginyl tRNA synthetase N terminal dom AC028_RS13480 SM01259 AC028_RS13480 AC028_RS13505 SM00470 ParB-like nuclease domain AC028_RS13655 SM00400 zinc finger AC028_RS13655 SM00493 AC028_RS13655 AC028_RS13655 SM00766 DNA primase DnaG DnaB-binding AC028_RS13685 SM00905 Dihydroneopterin aldolase AC028_RS13690 SM01217 AC028_RS13690 AC028_RS13725 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AC028_RS13735 SM00644 AC028_RS13735 AC028_RS13785 SM01150 AC028_RS13785 AC028_RS13855 SM00357 Cold shock protein domain AC028_RS13855 SM00382 ATPases associated with a variety of cellular activities AC028_RS13855 SM00959 Rho termination factor, N-terminal domain AC028_RS13865 SM00487 DEAD-like helicases superfamily AC028_RS13865 SM00490 helicase superfamily c-terminal domain AC028_RS13870 SM00382 ATPases associated with a variety of cellular activities AC028_RS13880 SM00448 cheY-homologous receiver domain AC028_RS13885 SM00986 Uracil DNA glycosylase superfamily AC028_RS13885 SM00987 UreE urease accessory protein, C-terminal domain AC028_RS13980 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AC028_RS13980 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AC028_RS13980 SM00493 AC028_RS13980 AC028_RS14005 SM00257 Lysin motif AC028_RS14105 SM01126 AC028_RS14105 AC028_RS14145 SM01126 AC028_RS14145 AC028_RS14235 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS14235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS14260 SM00631 AC028_RS14260 AC028_RS14265 SM00382 ATPases associated with a variety of cellular activities AC028_RS14340 SM00382 ATPases associated with a variety of cellular activities AC028_RS14400 SM00382 ATPases associated with a variety of cellular activities AC028_RS14400 SM00448 cheY-homologous receiver domain AC028_RS14410 SM00448 cheY-homologous receiver domain AC028_RS14415 SM00091 PAS domain AC028_RS14415 SM00138 Methyltransferase, chemotaxis proteins AC028_RS14415 SM00911 HWE histidine kinase AC028_RS14460 SM00387 Histidine kinase-like ATPases AC028_RS14465 SM00448 cheY-homologous receiver domain AC028_RS14465 SM00850 LytTr DNA-binding domain AC028_RS14530 SM00729 Elongator protein 3, MiaB family, Radical SAM AC028_RS14535 SM00986 Uracil DNA glycosylase superfamily AC028_RS14535 SM00987 UreE urease accessory protein, C-terminal domain AC028_RS14540 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AC028_RS14555 SM00382 ATPases associated with a variety of cellular activities AC028_RS14610 SM00344 helix_turn_helix ASNC type AC028_RS14620 SM01005 Alanine racemase, C-terminal domain AC028_RS14640 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AC028_RS14640 SM00091 PAS domain AC028_RS14640 SM00387 Histidine kinase-like ATPases AC028_RS14640 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS14640 SM00448 cheY-homologous receiver domain AC028_RS14695 SM00387 Histidine kinase-like ATPases AC028_RS14695 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS14695 SM00448 cheY-homologous receiver domain AC028_RS14715 SM00382 ATPases associated with a variety of cellular activities AC028_RS14715 SM00930 AC028_RS14715 AC028_RS14755 SM00986 Uracil DNA glycosylase superfamily AC028_RS14755 SM00987 UreE urease accessory protein, C-terminal domain AC028_RS14825 SM00382 ATPases associated with a variety of cellular activities AC028_RS14840 SM00830 Chorismate mutase type II AC028_RS14855 SM00387 Histidine kinase-like ATPases AC028_RS14860 SM00382 ATPases associated with a variety of cellular activities AC028_RS14860 SM00448 cheY-homologous receiver domain AC028_RS14885 SM00382 ATPases associated with a variety of cellular activities AC028_RS14990 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AC028_RS15010 SM01126 AC028_RS15010 AC028_RS15045 SM00487 DEAD-like helicases superfamily AC028_RS15045 SM00490 helicase superfamily c-terminal domain AC028_RS15085 SM00116 Domain in cystathionine beta-synthase and other proteins. AC028_RS15110 SM00382 ATPases associated with a variety of cellular activities AC028_RS15145 SM01126 AC028_RS15145 AC028_RS15190 SM00893 Electron transfer flavoprotein domain AC028_RS15195 SM00893 Electron transfer flavoprotein domain AC028_RS15220 SM00984 UDP binding domain AC028_RS15235 SM00882 Coenzyme A transferase AC028_RS15240 SM00882 Coenzyme A transferase AC028_RS15265 SM00382 ATPases associated with a variety of cellular activities AC028_RS15280 SM01126 AC028_RS15280 AC028_RS15305 SM00382 ATPases associated with a variety of cellular activities AC028_RS15390 SM00481 DNA polymerase alpha chain like domain AC028_RS15430 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AC028_RS15460 SM00267 diguanylate cyclase AC028_RS15485 SM00972 Spore Coat Protein U domain AC028_RS15500 SM00972 Spore Coat Protein U domain AC028_RS15510 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AC028_RS15530 SM01172 AC028_RS15530 AC028_RS15535 SM00710 Parallel beta-helix repeats AC028_RS15535 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses AC028_RS15560 SM00434 DNA Topoisomerase IV AC028_RS15565 SM00342 helix_turn_helix, arabinose operon control protein AC028_RS15570 SM00347 helix_turn_helix multiple antibiotic resistance protein AC028_RS15595 SM01217 AC028_RS15595 AC028_RS15600 SM00631 AC028_RS15600 AC028_RS15630 SM00347 helix_turn_helix multiple antibiotic resistance protein AC028_RS15655 SM00382 ATPases associated with a variety of cellular activities AC028_RS15670 SM00947 Carbonic anhydrase AC028_RS15685 SM00357 Cold shock protein domain AC028_RS15800 SM00267 diguanylate cyclase AC028_RS15810 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AC028_RS15810 SM00267 diguanylate cyclase AC028_RS15845 SM00465 GIY-YIG type nucleases (URI domain) AC028_RS15850 SM00382 ATPases associated with a variety of cellular activities AC028_RS15880 SM01126 AC028_RS15880 AC028_RS15910 SM00965 Secretin and TonB N terminus short domain AC028_RS15930 SM01126 AC028_RS15930 AC028_RS15945 SM01126 AC028_RS15945 AC028_RS15970 SM01154 AC028_RS15970 AC028_RS15985 SM00642 Alpha-amylase domain AC028_RS16000 SM00354 helix_turn _helix lactose operon repressor AC028_RS16010 SM00822 AC028_RS16010 AC028_RS16030 SM00448 cheY-homologous receiver domain AC028_RS16030 SM00862 Transcriptional regulatory protein, C terminal AC028_RS16035 SM00387 Histidine kinase-like ATPases AC028_RS16035 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS16050 SM00421 helix_turn_helix, Lux Regulon AC028_RS16050 SM00448 cheY-homologous receiver domain AC028_RS16090 SM00387 Histidine kinase-like ATPases AC028_RS16090 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS16090 SM00448 cheY-homologous receiver domain AC028_RS16105 SM00919 Malic enzyme, NAD binding domain AC028_RS16105 SM01274 AC028_RS16105 AC028_RS16115 SM00530 Helix-turn-helix XRE-family like proteins AC028_RS16125 SM01126 AC028_RS16125 AC028_RS16130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS16200 SM00271 DnaJ molecular chaperone homology domain AC028_RS16245 SM00382 ATPases associated with a variety of cellular activities AC028_RS16270 SM00861 Transketolase, pyrimidine binding domain AC028_RS16280 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AC028_RS16305 SM00116 Domain in cystathionine beta-synthase and other proteins. AC028_RS16305 SM01091 Transporter associated domain AC028_RS16340 SM00382 ATPases associated with a variety of cellular activities AC028_RS16345 SM00345 helix_turn_helix gluconate operon transcriptional repressor AC028_RS16365 SM00984 UDP binding domain AC028_RS16385 SM00354 helix_turn _helix lactose operon repressor AC028_RS16405 SM01018 B12 binding domain AC028_RS16415 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AC028_RS16480 SM00316 Ribosomal protein S1-like RNA-binding domain AC028_RS16480 SM00357 Cold shock protein domain AC028_RS16480 SM00955 AC028_RS16480 AC028_RS16490 SM01126 AC028_RS16490 AC028_RS16500 SM00967 RNA 2'-O ribose methyltransferase substrate binding AC028_RS16505 SM00267 diguanylate cyclase AC028_RS16510 SM00479 AC028_RS16510 AC028_RS16525 SM00382 ATPases associated with a variety of cellular activities AC028_RS16560 SM00947 Carbonic anhydrase AC028_RS16570 SM00478 endonuclease III AC028_RS16595 SM00450 Rhodanese Homology Domain AC028_RS16605 SM00644 AC028_RS16605 AC028_RS16625 SM00382 ATPases associated with a variety of cellular activities AC028_RS16635 SM00981 AC028_RS16635 AC028_RS16660 SM00479 AC028_RS16660 AC028_RS16685 SM00947 Carbonic anhydrase AC028_RS16730 SM00421 helix_turn_helix, Lux Regulon AC028_RS16730 SM00448 cheY-homologous receiver domain AC028_RS16805 SM00968 SMC proteins Flexible Hinge Domain AC028_RS16810 SM00771 ZipA, C-terminal domain (FtsZ-binding) AC028_RS16825 SM00292 breast cancer carboxy-terminal domain AC028_RS16825 SM00532 Ligase N family AC028_RS16850 SM00434 DNA Topoisomerase IV AC028_RS16855 SM00564 beta-propeller repeat AC028_RS16895 SM00345 helix_turn_helix gluconate operon transcriptional repressor AC028_RS16895 SM00866 AC028_RS16895 AC028_RS16915 SM00240 Forkhead associated domain AC028_RS16940 SM00830 Chorismate mutase type II AC028_RS16985 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS16985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS16995 SM00347 helix_turn_helix multiple antibiotic resistance protein AC028_RS17005 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AC028_RS17005 SM00091 PAS domain AC028_RS17005 SM00387 Histidine kinase-like ATPases AC028_RS17005 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS17005 SM00448 cheY-homologous receiver domain AC028_RS17010 SM00448 cheY-homologous receiver domain AC028_RS17015 SM00382 ATPases associated with a variety of cellular activities AC028_RS17020 SM00091 PAS domain AC028_RS17020 SM00387 Histidine kinase-like ATPases AC028_RS17020 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS17020 SM00448 cheY-homologous receiver domain AC028_RS17175 SM00729 Elongator protein 3, MiaB family, Radical SAM AC028_RS17185 SM00382 ATPases associated with a variety of cellular activities AC028_RS17210 SM00116 Domain in cystathionine beta-synthase and other proteins. AC028_RS17210 SM01091 Transporter associated domain AC028_RS17240 SM00387 Histidine kinase-like ATPases AC028_RS17240 SM00433 TopoisomeraseII AC028_RS17265 SM01192 AC028_RS17265 AC028_RS17265 SM01193 AC028_RS17265 AC028_RS17290 SM00463 Small MutS-related domain AC028_RS17310 SM00257 Lysin motif AC028_RS17320 SM01103 AC028_RS17320 AC028_RS17330 SM00382 ATPases associated with a variety of cellular activities AC028_RS17370 SM00382 ATPases associated with a variety of cellular activities AC028_RS17385 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AC028_RS17405 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AC028_RS17405 SM00091 PAS domain AC028_RS17405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS17455 SM00670 Large family of predicted nucleotide-binding domains AC028_RS17475 SM01130 AC028_RS17475 AC028_RS17500 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AC028_RS17545 SM00758 AC028_RS17545 AC028_RS17580 SM01126 AC028_RS17580 AC028_RS17660 SM00052 Putative diguanylate phosphodiesterase AC028_RS17660 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AC028_RS17660 SM00267 diguanylate cyclase AC028_RS17670 SM00448 cheY-homologous receiver domain AC028_RS17675 SM00387 Histidine kinase-like ATPases AC028_RS17685 SM00014 Acid phosphatase homologues AC028_RS17780 SM00100 Cyclic nucleotide-monophosphate binding domain AC028_RS17780 SM00419 helix_turn_helix, cAMP Regulatory protein AC028_RS17845 SM01126 AC028_RS17845 AC028_RS17860 SM01007 Class II Aldolase and Adducin N-terminal domain AC028_RS17905 SM00841 Elongation factor P, C-terminal AC028_RS17905 SM01185 AC028_RS17905 AC028_RS17910 SM00822 AC028_RS17910 AC028_RS17930 SM00899 AC028_RS17930 AC028_RS17965 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AC028_RS17975 SM00851 MGS-like domain AC028_RS17975 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AC028_RS18000 SM00850 LytTr DNA-binding domain AC028_RS18005 SM00937 AC028_RS18005 AC028_RS18015 SM00448 cheY-homologous receiver domain AC028_RS18015 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AC028_RS18025 SM00073 Histidine Phosphotransfer domain AC028_RS18025 SM00387 Histidine kinase-like ATPases AC028_RS18025 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS18025 SM00448 cheY-homologous receiver domain AC028_RS18050 SM00966 SpoVT / AbrB like domain AC028_RS18070 SM00052 Putative diguanylate phosphodiesterase AC028_RS18070 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AC028_RS18070 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AC028_RS18070 SM00091 PAS domain AC028_RS18070 SM00267 diguanylate cyclase AC028_RS18075 SM00448 cheY-homologous receiver domain AC028_RS18085 SM00138 Methyltransferase, chemotaxis proteins AC028_RS18090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS18090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS18105 SM00260 Two component signalling adaptor domain AC028_RS18120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS18120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS18130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS18130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS18135 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS18135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS18140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS18140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS18145 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS18145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS18155 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS18155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS18165 SM01126 AC028_RS18165 AC028_RS18170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS18185 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS18185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS18190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS18190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS18190 SM01049 AC028_RS18190 AC028_RS18205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS18205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS18210 SM00073 Histidine Phosphotransfer domain AC028_RS18210 SM00260 Two component signalling adaptor domain AC028_RS18210 SM00387 Histidine kinase-like ATPases AC028_RS18210 SM01231 AC028_RS18210 AC028_RS18215 SM00448 cheY-homologous receiver domain AC028_RS18225 SM00260 Two component signalling adaptor domain AC028_RS18255 SM01126 AC028_RS18255 AC028_RS18270 SM00382 ATPases associated with a variety of cellular activities AC028_RS18275 SM01126 AC028_RS18275 AC028_RS18320 SM00073 Histidine Phosphotransfer domain AC028_RS18320 SM00260 Two component signalling adaptor domain AC028_RS18320 SM00387 Histidine kinase-like ATPases AC028_RS18320 SM01231 AC028_RS18320 AC028_RS18330 SM00448 cheY-homologous receiver domain AC028_RS18345 SM00382 ATPases associated with a variety of cellular activities AC028_RS18345 SM00962 SRP54-type protein, GTPase domain AC028_RS18360 SM00052 Putative diguanylate phosphodiesterase AC028_RS18360 SM00267 diguanylate cyclase AC028_RS18390 SM01126 AC028_RS18390 AC028_RS18430 SM00382 ATPases associated with a variety of cellular activities AC028_RS18465 SM01126 AC028_RS18465 AC028_RS18500 SM01126 AC028_RS18500 AC028_RS18550 SM00382 ATPases associated with a variety of cellular activities AC028_RS18555 SM00448 cheY-homologous receiver domain AC028_RS18565 SM00421 helix_turn_helix, Lux Regulon AC028_RS18565 SM00448 cheY-homologous receiver domain AC028_RS18605 SM00047 Lysozyme subfamily 2 AC028_RS18655 SM00260 Two component signalling adaptor domain AC028_RS18655 SM00448 cheY-homologous receiver domain AC028_RS18660 SM00858 AC028_RS18660 AC028_RS18675 SM00387 Histidine kinase-like ATPases AC028_RS18680 SM00052 Putative diguanylate phosphodiesterase AC028_RS18680 SM00267 diguanylate cyclase AC028_RS18680 SM00448 cheY-homologous receiver domain AC028_RS18685 SM00091 PAS domain AC028_RS18685 SM00387 Histidine kinase-like ATPases AC028_RS18690 SM00052 Putative diguanylate phosphodiesterase AC028_RS18690 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AC028_RS18690 SM00091 PAS domain AC028_RS18690 SM00267 diguanylate cyclase AC028_RS18700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS18725 SM00382 ATPases associated with a variety of cellular activities AC028_RS18725 SM01086 C-terminal, D2-small domain, of ClpB protein AC028_RS18730 SM00316 Ribosomal protein S1-like RNA-binding domain AC028_RS18750 SM00382 ATPases associated with a variety of cellular activities AC028_RS18750 SM00843 AC028_RS18750 AC028_RS18770 SM00382 ATPases associated with a variety of cellular activities AC028_RS18800 SM00562 AC028_RS18800 AC028_RS18810 SM00028 Tetratricopeptide repeats AC028_RS18825 SM00564 beta-propeller repeat AC028_RS18830 SM00382 ATPases associated with a variety of cellular activities AC028_RS18835 SM00852 Probable molybdopterin binding domain AC028_RS18840 SM00450 Rhodanese Homology Domain AC028_RS18890 SM00852 Probable molybdopterin binding domain AC028_RS18905 SM00342 helix_turn_helix, arabinose operon control protein AC028_RS18910 SM00822 AC028_RS18910 AC028_RS18930 SM00529 Helix-turn-helix diphteria tox regulatory element AC028_RS18940 SM00479 AC028_RS18940 AC028_RS19010 SM00316 Ribosomal protein S1-like RNA-binding domain AC028_RS19010 SM00732 Likely ribonuclease with RNase H fold. AC028_RS19020 SM00448 cheY-homologous receiver domain AC028_RS19105 SM00382 ATPases associated with a variety of cellular activities AC028_RS19160 SM00382 ATPases associated with a variety of cellular activities AC028_RS19170 SM00849 Metallo-beta-lactamase superfamily AC028_RS19185 SM00382 ATPases associated with a variety of cellular activities AC028_RS19200 SM00226 Low molecular weight phosphatase family AC028_RS19220 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AC028_RS19220 SM00465 GIY-YIG type nucleases (URI domain) AC028_RS19250 SM00984 UDP binding domain AC028_RS19270 SM00450 Rhodanese Homology Domain AC028_RS19275 SM00421 helix_turn_helix, Lux Regulon AC028_RS19275 SM00448 cheY-homologous receiver domain AC028_RS19285 SM00363 S4 RNA-binding domain AC028_RS19360 SM01126 AC028_RS19360 AC028_RS19370 SM01126 AC028_RS19370 AC028_RS19380 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AC028_RS19380 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AC028_RS19380 SM00091 PAS domain AC028_RS19380 SM00448 cheY-homologous receiver domain AC028_RS19380 SM00911 HWE histidine kinase AC028_RS19415 SM01126 AC028_RS19415 AC028_RS19505 SM01034 Sensors of blue-light using FAD AC028_RS19510 SM01126 AC028_RS19510 AC028_RS19515 SM00052 Putative diguanylate phosphodiesterase AC028_RS19590 SM00342 helix_turn_helix, arabinose operon control protein AC028_RS19595 SM00387 Histidine kinase-like ATPases AC028_RS19605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS19635 SM00487 DEAD-like helicases superfamily AC028_RS19665 SM01126 AC028_RS19665 AC028_RS19690 SM00116 Domain in cystathionine beta-synthase and other proteins. AC028_RS19690 SM01240 AC028_RS19690 AC028_RS19720 SM00822 AC028_RS19720 AC028_RS19730 SM00028 Tetratricopeptide repeats AC028_RS19740 SM00411 bacterial (prokaryotic) histone like domain AC028_RS19745 SM00316 Ribosomal protein S1-like RNA-binding domain AC028_RS19820 SM00354 helix_turn _helix lactose operon repressor AC028_RS19845 SM00363 S4 RNA-binding domain AC028_RS19870 SM00382 ATPases associated with a variety of cellular activities AC028_RS19920 SM00357 Cold shock protein domain AC028_RS19925 SM00382 ATPases associated with a variety of cellular activities AC028_RS19930 SM00382 ATPases associated with a variety of cellular activities AC028_RS19970 SM00530 Helix-turn-helix XRE-family like proteins AC028_RS19975 SM00382 ATPases associated with a variety of cellular activities AC028_RS20005 SM01126 AC028_RS20005 AC028_RS20080 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AC028_RS20095 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AC028_RS20110 SM00859 Semialdehyde dehydrogenase, NAD binding domain AC028_RS20150 SM00840 AC028_RS20150 AC028_RS20170 SM01234 AC028_RS20170 AC028_RS20205 SM00849 Metallo-beta-lactamase superfamily AC028_RS20220 SM00656 AC028_RS20220 AC028_RS20225 SM01126 AC028_RS20225 AC028_RS20250 SM01126 AC028_RS20250 AC028_RS20270 SM00841 Elongation factor P, C-terminal AC028_RS20270 SM01185 AC028_RS20270 AC028_RS20280 SM00052 Putative diguanylate phosphodiesterase AC028_RS20280 SM00267 diguanylate cyclase AC028_RS20280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS20320 SM00382 ATPases associated with a variety of cellular activities AC028_RS20325 SM00382 ATPases associated with a variety of cellular activities AC028_RS20325 SM00487 DEAD-like helicases superfamily AC028_RS20325 SM00490 helicase superfamily c-terminal domain AC028_RS20350 SM00357 Cold shock protein domain AC028_RS20355 SM01322 AC028_RS20355 AC028_RS20365 SM00052 Putative diguanylate phosphodiesterase AC028_RS20365 SM00267 diguanylate cyclase AC028_RS20380 SM00822 AC028_RS20380 AC028_RS20410 SM00646 AC028_RS20410 AC028_RS20455 SM00474 3'-5' exonuclease AC028_RS20470 SM00528 Domain in histone-like proteins of HNS family AC028_RS20485 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AC028_RS20485 SM00267 diguanylate cyclase AC028_RS20490 SM00260 Two component signalling adaptor domain AC028_RS20495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS20495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS20505 SM00487 DEAD-like helicases superfamily AC028_RS20505 SM00490 helicase superfamily c-terminal domain AC028_RS20570 SM00729 Elongator protein 3, MiaB family, Radical SAM AC028_RS20595 SM00116 Domain in cystathionine beta-synthase and other proteins. AC028_RS20595 SM01091 Transporter associated domain AC028_RS20630 SM00382 ATPases associated with a variety of cellular activities AC028_RS20660 SM01230 AC028_RS20660 AC028_RS20670 SM01230 AC028_RS20670 AC028_RS20680 SM00267 diguanylate cyclase AC028_RS20680 SM00448 cheY-homologous receiver domain AC028_RS20695 SM01126 AC028_RS20695 AC028_RS20750 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AC028_RS20750 SM00091 PAS domain AC028_RS20750 SM00387 Histidine kinase-like ATPases AC028_RS20750 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS20750 SM00448 cheY-homologous receiver domain AC028_RS20750 SM01079 AC028_RS20750 AC028_RS20755 SM00448 cheY-homologous receiver domain AC028_RS20755 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AC028_RS20815 SM00354 helix_turn _helix lactose operon repressor AC028_RS20865 SM01323 AC028_RS20865 AC028_RS20880 SM00344 helix_turn_helix ASNC type AC028_RS20955 SM00387 Histidine kinase-like ATPases AC028_RS20965 SM01126 AC028_RS20965 AC028_RS20975 SM01126 AC028_RS20975 AC028_RS21030 SM00944 Pro-kumamolisin, activation domain AC028_RS21080 SM01130 AC028_RS21080 AC028_RS21105 SM00342 helix_turn_helix, arabinose operon control protein AC028_RS21110 SM00382 ATPases associated with a variety of cellular activities AC028_RS21110 SM00962 SRP54-type protein, GTPase domain AC028_RS21110 SM00963 SRP54-type protein, helical bundle domain AC028_RS21120 SM00478 endonuclease III AC028_RS21130 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AC028_RS21130 SM00091 PAS domain AC028_RS21130 SM00387 Histidine kinase-like ATPases AC028_RS21130 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS21130 SM00448 cheY-homologous receiver domain AC028_RS21145 SM00465 GIY-YIG type nucleases (URI domain) AC028_RS21175 SM00507 HNH nucleases AC028_RS21180 SM00861 Transketolase, pyrimidine binding domain AC028_RS21205 SM00849 Metallo-beta-lactamase superfamily AC028_RS21290 SM00422 helix_turn_helix, mercury resistance AC028_RS21295 SM00411 bacterial (prokaryotic) histone like domain AC028_RS21300 SM00873 B3/4 domain AC028_RS21300 SM00874 tRNA synthetase B5 domain AC028_RS21300 SM00896 Ferredoxin-fold anticodon binding domain AC028_RS21325 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AC028_RS21330 SM00354 helix_turn _helix lactose operon repressor AC028_RS21340 SM01126 AC028_RS21340 AC028_RS21365 SM01126 AC028_RS21365 AC028_RS21395 SM00487 DEAD-like helicases superfamily AC028_RS21395 SM00490 helicase superfamily c-terminal domain AC028_RS21440 SM01126 AC028_RS21440 AC028_RS21500 SM01001 AIR carboxylase AC028_RS21520 SM00316 Ribosomal protein S1-like RNA-binding domain AC028_RS21520 SM00322 K homology RNA-binding domain AC028_RS21525 SM01387 AC028_RS21525 AC028_RS21545 SM00316 Ribosomal protein S1-like RNA-binding domain AC028_RS21545 SM00322 K homology RNA-binding domain AC028_RS21595 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AC028_RS21600 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AC028_RS21645 SM00822 AC028_RS21645 AC028_RS21665 SM00052 Putative diguanylate phosphodiesterase AC028_RS21665 SM00267 diguanylate cyclase AC028_RS21665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS21730 SM00859 Semialdehyde dehydrogenase, NAD binding domain AC028_RS21760 SM00257 Lysin motif AC028_RS21800 SM00729 Elongator protein 3, MiaB family, Radical SAM AC028_RS21870 SM01160 AC028_RS21870 AC028_RS21925 SM00098 Alkaline phosphatase homologues AC028_RS21935 SM00977 TilS substrate C-terminal domain AC028_RS21955 SM01351 AC028_RS21955 AC028_RS21990 SM00316 Ribosomal protein S1-like RNA-binding domain AC028_RS22065 SM01126 AC028_RS22065 AC028_RS22140 SM00382 ATPases associated with a variety of cellular activities AC028_RS22155 SM01126 AC028_RS22155 AC028_RS22205 SM00645 Papain family cysteine protease AC028_RS22210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS22210 SM00387 Histidine kinase-like ATPases AC028_RS22210 SM00388 His Kinase A (phosphoacceptor) domain AC028_RS22215 SM00448 cheY-homologous receiver domain AC028_RS22215 SM00862 Transcriptional regulatory protein, C terminal AC028_RS22230 SM01126 AC028_RS22230 AC028_RS22235 SM00487 DEAD-like helicases superfamily AC028_RS22235 SM00490 helicase superfamily c-terminal domain AC028_RS22235 SM00982 AC028_RS22235 AC028_RS22235 SM01058 CarD-like/TRCF domain AC028_RS22245 SM00073 Histidine Phosphotransfer domain AC028_RS22245 SM00260 Two component signalling adaptor domain AC028_RS22245 SM00387 Histidine kinase-like ATPases AC028_RS22245 SM01231 AC028_RS22245 AC028_RS22255 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AC028_RS22255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AC028_RS22260 SM00260 Two component signalling adaptor domain AC028_RS22315 SM00857 Resolvase, N terminal domain