AC028_RS21200 0882f3d4507d5489cf6512bd4d8ee4e4 319 SUPERFAMILY SSF51735 3 316 2.9E-48 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS21200 0882f3d4507d5489cf6512bd4d8ee4e4 319 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 213 1.3E-27 T 05-07-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AC028_RS21200 0882f3d4507d5489cf6512bd4d8ee4e4 319 Gene3D G3DSA:3.40.50.720 4 310 2.6E-41 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 Gene3D G3DSA:1.10.287.560 171 232 1.2E-17 T 05-07-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 Pfam PF01627 Hpt domain 9 103 1.2E-15 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 SUPERFAMILY SSF55874 234 417 4.45E-40 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 Gene3D G3DSA:1.20.120.160 6 142 6.8E-36 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 SMART SM00387 276 419 7.9E-26 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 Gene3D G3DSA:2.40.50.180 443 503 5.3E-9 T 05-07-2017 AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 SUPERFAMILY SSF47226 7 123 1.22E-27 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 SMART SM00260 411 548 5.3E-30 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 SUPERFAMILY SSF50341 418 547 3.92E-31 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 172 230 1.1E-11 T 05-07-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 Pfam PF01584 CheW-like domain 425 547 2.9E-26 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 279 418 1.4E-18 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 Gene3D G3DSA:3.30.565.10 234 418 6.5E-38 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 SMART SM00073 5 102 7.1E-16 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 Gene3D G3DSA:2.30.30.40 419 440 2.2E-21 T 05-07-2017 AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 Gene3D G3DSA:2.30.30.40 504 547 2.2E-21 T 05-07-2017 AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 SUPERFAMILY SSF47384 172 232 4.32E-13 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 SMART SM01231 171 231 2.8E-16 T 05-07-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 397 4.9E-14 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 373 4.9E-14 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 335 4.9E-14 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS18320 5d021471279785bc79d77b50c32fa3ef 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 416 4.9E-14 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS01255 9212a8aae2fc1a4df2c5291b4f33e223 299 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 2 299 1.1E-134 T 05-07-2017 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 AC028_RS01255 9212a8aae2fc1a4df2c5291b4f33e223 299 SUPERFAMILY SSF56281 1 299 1.82E-52 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS01255 9212a8aae2fc1a4df2c5291b4f33e223 299 Gene3D G3DSA:3.60.15.10 1 299 8.8E-102 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS01255 9212a8aae2fc1a4df2c5291b4f33e223 299 Pfam PF12706 Beta-lactamase superfamily domain 50 265 3.1E-52 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS01255 9212a8aae2fc1a4df2c5291b4f33e223 299 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 299 144.908 T 05-07-2017 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 AC028_RS07530 16013757cdf5655ad87797408d2e6d0a 336 SUPERFAMILY SSF51430 7 325 4.19E-63 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS07530 16013757cdf5655ad87797408d2e6d0a 336 Gene3D G3DSA:3.20.20.100 6 323 4.4E-54 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS07530 16013757cdf5655ad87797408d2e6d0a 336 Pfam PF00248 Aldo/keto reductase family 19 323 2.8E-45 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS15720 209ce8e18cd6b0b6cf98ac58ec470f45 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 134 146 - T 05-07-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AC028_RS15720 209ce8e18cd6b0b6cf98ac58ec470f45 387 SUPERFAMILY SSF47203 238 385 8.22E-40 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS15720 209ce8e18cd6b0b6cf98ac58ec470f45 387 Gene3D G3DSA:1.10.540.10 5 129 5.2E-37 T 05-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AC028_RS15720 209ce8e18cd6b0b6cf98ac58ec470f45 387 SUPERFAMILY SSF56645 6 231 2.09E-73 T 05-07-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AC028_RS15720 209ce8e18cd6b0b6cf98ac58ec470f45 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 132 222 4.5E-22 T 05-07-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AC028_RS15720 209ce8e18cd6b0b6cf98ac58ec470f45 387 Gene3D G3DSA:1.20.140.10 222 384 5.9E-41 T 05-07-2017 AC028_RS15720 209ce8e18cd6b0b6cf98ac58ec470f45 387 Gene3D G3DSA:2.40.110.10 131 221 5.8E-34 T 05-07-2017 AC028_RS15720 209ce8e18cd6b0b6cf98ac58ec470f45 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 381 1.5E-30 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS15720 209ce8e18cd6b0b6cf98ac58ec470f45 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 16 127 1.1E-31 T 05-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AC028_RS06405 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS06405 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS06405 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS20250 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS20250 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS20250 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS09370 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS09370 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS09370 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS18255 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS18255 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS18255 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS15145 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS15145 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS15145 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS04085 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS04085 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS04085 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS07340 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS07340 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS07340 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS17580 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS17580 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS17580 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS12760 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS12760 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS12760 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS08815 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS08815 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS08815 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS06395 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS06395 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS06395 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS19370 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS19370 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS19370 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS08460 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS08460 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS08460 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS20225 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS20225 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS20225 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS05015 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS05015 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS05015 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS13415 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS13415 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS13415 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS19415 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS19415 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS19415 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS19665 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS19665 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS19665 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS06720 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS06720 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS06720 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS21365 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS21365 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS21365 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS08470 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS08470 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS08470 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS22230 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS22230 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS22230 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS07790 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS07790 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS07790 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS21340 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS21340 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS21340 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS06715 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS06715 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS06715 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS03385 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS03385 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS03385 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS06700 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS06700 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS06700 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS18465 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS18465 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS18465 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS19510 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS19510 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS19510 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS05465 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS05465 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS05465 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS09550 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS09550 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS09550 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS15945 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS15945 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS15945 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS18390 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS18390 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS18390 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS07190 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS07190 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS07190 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS20965 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS20965 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS20965 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS10785 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS10785 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS10785 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS09025 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS09025 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS09025 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS18275 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS18275 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS18275 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS15930 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS15930 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS15930 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS16125 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS16125 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS16125 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS14105 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS14105 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS14105 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS01950 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS01950 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS01950 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS07350 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS07350 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS07350 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS18165 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS18165 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS18165 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS03995 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS03995 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS03995 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS00620 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS00620 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS00620 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS07390 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS07390 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS07390 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS19360 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS19360 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS19360 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS15280 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS15280 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS15280 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS14145 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS14145 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS14145 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS06390 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS06390 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS06390 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS03375 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS03375 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS03375 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS21440 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS21440 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS21440 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS15010 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS15010 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS15010 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS04520 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS04520 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS04520 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS12055 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS12055 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS12055 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS09085 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS09085 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS09085 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS05030 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS05030 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS05030 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS20695 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS20695 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS20695 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS22065 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS22065 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS22065 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS01140 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS01140 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS01140 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS01510 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS01510 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS01510 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS01720 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS01720 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS01720 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS09540 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS09540 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS09540 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS15880 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS15880 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS15880 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS03250 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS03250 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS03250 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS00080 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS00080 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS00080 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS08725 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS08725 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS08725 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS20975 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS20975 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS20975 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS20005 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS20005 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS20005 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS12575 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS12575 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS12575 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS00825 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS00825 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS00825 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS22155 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS22155 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS22155 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS09020 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS09020 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS09020 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS08670 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS08670 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS08670 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS09560 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS09560 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS09560 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS16490 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS16490 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS16490 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS17845 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS17845 4d15af673cd0bbc5b9990af237bc3c01 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS17845 4d15af673cd0bbc5b9990af237bc3c01 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS16585 a900fea8ad65c520f4c5faff00c13e9b 232 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 181 229 3.4E-7 T 05-07-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 AC028_RS16585 a900fea8ad65c520f4c5faff00c13e9b 232 Gene3D G3DSA:3.10.50.40 119 232 2.5E-19 T 05-07-2017 AC028_RS16585 a900fea8ad65c520f4c5faff00c13e9b 232 SUPERFAMILY SSF54534 27 232 1.73E-33 T 05-07-2017 AC028_RS16585 a900fea8ad65c520f4c5faff00c13e9b 232 Gene3D G3DSA:1.10.287.460 11 118 1.3E-26 T 05-07-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AC028_RS16585 a900fea8ad65c520f4c5faff00c13e9b 232 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 19 135 3.5E-27 T 05-07-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AC028_RS18620 b93bd3584f43667c5f74b6235249cae6 261 SUPERFAMILY SSF117143 93 222 2.75E-34 T 05-07-2017 AC028_RS18620 b93bd3584f43667c5f74b6235249cae6 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 259 2.2E-24 T 05-07-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AC028_RS18620 b93bd3584f43667c5f74b6235249cae6 261 Pfam PF00460 Flagella basal body rod protein 5 35 8.2E-14 T 05-07-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AC028_RS18620 b93bd3584f43667c5f74b6235249cae6 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 144 243 2.4E-31 T 05-07-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AC028_RS18620 b93bd3584f43667c5f74b6235249cae6 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 1.3E-48 T 05-07-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AC028_RS18620 b93bd3584f43667c5f74b6235249cae6 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 5.1E-114 T 05-07-2017 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 AC028_RS18620 b93bd3584f43667c5f74b6235249cae6 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 05-07-2017 IPR019776 Flagellar basal body rod protein, conserved site AC028_RS15795 70339c8e1556dba4212930e146d94c49 474 Gene3D G3DSA:1.20.1600.10 346 459 6.0E-89 T 05-07-2017 AC028_RS15795 70339c8e1556dba4212930e146d94c49 474 Gene3D G3DSA:1.20.1600.10 49 86 6.0E-89 T 05-07-2017 AC028_RS15795 70339c8e1556dba4212930e146d94c49 474 Gene3D G3DSA:1.20.1600.10 136 308 6.0E-89 T 05-07-2017 AC028_RS15795 70339c8e1556dba4212930e146d94c49 474 Pfam PF02321 Outer membrane efflux protein 60 248 2.3E-23 T 05-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AC028_RS15795 70339c8e1556dba4212930e146d94c49 474 Pfam PF02321 Outer membrane efflux protein 279 457 1.9E-23 T 05-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AC028_RS15795 70339c8e1556dba4212930e146d94c49 474 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 458 6.8E-107 T 05-07-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AC028_RS15795 70339c8e1556dba4212930e146d94c49 474 SUPERFAMILY SSF56954 2 460 5.36E-97 T 05-07-2017 AC028_RS15795 70339c8e1556dba4212930e146d94c49 474 Gene3D G3DSA:2.20.200.10 97 135 9.3E-14 T 05-07-2017 AC028_RS15795 70339c8e1556dba4212930e146d94c49 474 Gene3D G3DSA:2.20.200.10 309 342 9.3E-14 T 05-07-2017 AC028_RS18565 8b16cab7c5e81ad54bc11cab8aec899e 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 2.1E-17 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS18565 8b16cab7c5e81ad54bc11cab8aec899e 210 SUPERFAMILY SSF52172 2 130 3.7E-31 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS18565 8b16cab7c5e81ad54bc11cab8aec899e 210 Gene3D G3DSA:3.40.50.2300 2 120 6.3E-32 T 05-07-2017 AC028_RS18565 8b16cab7c5e81ad54bc11cab8aec899e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.5E-12 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS18565 8b16cab7c5e81ad54bc11cab8aec899e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.5E-12 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS18565 8b16cab7c5e81ad54bc11cab8aec899e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.5E-12 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS18565 8b16cab7c5e81ad54bc11cab8aec899e 210 SMART SM00448 1 114 1.6E-26 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS18565 8b16cab7c5e81ad54bc11cab8aec899e 210 SMART SM00421 145 202 2.4E-21 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS18565 8b16cab7c5e81ad54bc11cab8aec899e 210 Gene3D G3DSA:1.10.10.10 121 206 5.9E-24 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS18565 8b16cab7c5e81ad54bc11cab8aec899e 210 Pfam PF00072 Response regulator receiver domain 3 114 4.9E-26 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS18565 8b16cab7c5e81ad54bc11cab8aec899e 210 SUPERFAMILY SSF46894 139 206 5.78E-19 T 05-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AC028_RS01975 eab2b03c44143aa9b899810538c515b3 480 Pfam PF03389 MobA/MobL family 2 153 9.7E-31 T 05-07-2017 IPR005053 MobA/MobL protein AC028_RS15040 fe396b8c7d381067fcac0ee5847ade58 765 Pfam PF04389 Peptidase family M28 338 549 1.3E-17 T 05-07-2017 IPR007484 Peptidase M28 AC028_RS15040 fe396b8c7d381067fcac0ee5847ade58 765 Gene3D G3DSA:3.40.630.10 49 105 4.1E-77 T 05-07-2017 AC028_RS15040 fe396b8c7d381067fcac0ee5847ade58 765 Gene3D G3DSA:3.40.630.10 323 584 4.1E-77 T 05-07-2017 AC028_RS15040 fe396b8c7d381067fcac0ee5847ade58 765 Gene3D G3DSA:3.50.30.30 136 321 3.6E-56 T 05-07-2017 AC028_RS15040 fe396b8c7d381067fcac0ee5847ade58 765 SUPERFAMILY SSF47672 582 610 4.97E-27 T 05-07-2017 IPR007365 Transferrin receptor-like, dimerisation domain AC028_RS15040 fe396b8c7d381067fcac0ee5847ade58 765 SUPERFAMILY SSF47672 640 757 4.97E-27 T 05-07-2017 IPR007365 Transferrin receptor-like, dimerisation domain AC028_RS15040 fe396b8c7d381067fcac0ee5847ade58 765 SUPERFAMILY SSF53187 59 99 6.0E-59 T 05-07-2017 AC028_RS15040 fe396b8c7d381067fcac0ee5847ade58 765 SUPERFAMILY SSF53187 322 581 6.0E-59 T 05-07-2017 AC028_RS15040 fe396b8c7d381067fcac0ee5847ade58 765 Pfam PF02225 PA domain 157 224 1.4E-9 T 05-07-2017 IPR003137 PA domain AC028_RS15040 fe396b8c7d381067fcac0ee5847ade58 765 Gene3D G3DSA:1.20.930.40 643 735 8.1E-9 T 05-07-2017 IPR007365 Transferrin receptor-like, dimerisation domain AC028_RS15040 fe396b8c7d381067fcac0ee5847ade58 765 Pfam PF04253 Transferrin receptor-like dimerisation domain 644 753 2.9E-20 T 05-07-2017 IPR007365 Transferrin receptor-like, dimerisation domain AC028_RS15040 fe396b8c7d381067fcac0ee5847ade58 765 SUPERFAMILY SSF52025 105 340 3.14E-69 T 05-07-2017 AC028_RS18905 38af8fc25b54aaaa5fc989f06cfc3b05 360 Pfam PF12833 Helix-turn-helix domain 281 358 3.9E-17 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS18905 38af8fc25b54aaaa5fc989f06cfc3b05 360 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 49 232 2.3E-37 T 05-07-2017 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AC028_RS18905 38af8fc25b54aaaa5fc989f06cfc3b05 360 SUPERFAMILY SSF46689 311 359 3.32E-12 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS18905 38af8fc25b54aaaa5fc989f06cfc3b05 360 SMART SM00342 275 357 6.1E-21 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS18905 38af8fc25b54aaaa5fc989f06cfc3b05 360 Gene3D G3DSA:1.10.10.60 311 359 5.9E-15 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS09260 beac93b08acde8513c59e8d68b93deb0 485 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 278 314 - T 05-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AC028_RS09260 beac93b08acde8513c59e8d68b93deb0 485 Gene3D G3DSA:3.40.640.10 113 362 1.1E-58 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS09260 beac93b08acde8513c59e8d68b93deb0 485 Gene3D G3DSA:3.90.1150.10 372 483 3.1E-24 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS09260 beac93b08acde8513c59e8d68b93deb0 485 Gene3D G3DSA:3.90.1150.10 41 112 3.1E-24 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS09260 beac93b08acde8513c59e8d68b93deb0 485 Pfam PF00202 Aminotransferase class-III 74 410 5.5E-49 T 05-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AC028_RS09260 beac93b08acde8513c59e8d68b93deb0 485 SUPERFAMILY SSF53383 49 482 3.58E-87 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS10645 099ff5d4d681a98fab1d082ab9995e49 318 Gene3D G3DSA:3.40.50.20 18 100 2.9E-25 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS10645 099ff5d4d681a98fab1d082ab9995e49 318 PIRSF PIRSF039102 55 318 6.8E-83 T 05-07-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS10645 099ff5d4d681a98fab1d082ab9995e49 318 Gene3D G3DSA:3.30.470.20 101 119 4.7E-46 T 05-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AC028_RS10645 099ff5d4d681a98fab1d082ab9995e49 318 Gene3D G3DSA:3.30.470.20 193 317 4.7E-46 T 05-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AC028_RS10645 099ff5d4d681a98fab1d082ab9995e49 318 SUPERFAMILY SSF56059 112 315 1.85E-53 T 05-07-2017 AC028_RS10645 099ff5d4d681a98fab1d082ab9995e49 318 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 79 90 - T 05-07-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS10645 099ff5d4d681a98fab1d082ab9995e49 318 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 17 318 35.137 T 05-07-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS10645 099ff5d4d681a98fab1d082ab9995e49 318 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 259 288 - T 05-07-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS10645 099ff5d4d681a98fab1d082ab9995e49 318 SUPERFAMILY SSF52440 18 112 5.47E-26 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS10645 099ff5d4d681a98fab1d082ab9995e49 318 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 18 317 1.4E-104 T 05-07-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS10645 099ff5d4d681a98fab1d082ab9995e49 318 Pfam PF07478 D-ala D-ala ligase C-terminus 120 314 2.3E-55 T 05-07-2017 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS10645 099ff5d4d681a98fab1d082ab9995e49 318 Pfam PF01820 D-ala D-ala ligase N-terminus 18 102 1.1E-19 T 05-07-2017 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS10645 099ff5d4d681a98fab1d082ab9995e49 318 Gene3D G3DSA:3.30.1490.20 123 192 6.6E-21 T 05-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AC028_RS12845 f116a2d2ea101db7b7db1a83192dab12 429 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 421 2.3E-11 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS12845 f116a2d2ea101db7b7db1a83192dab12 429 SUPERFAMILY SSF55874 284 421 2.36E-21 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS12845 f116a2d2ea101db7b7db1a83192dab12 429 Gene3D G3DSA:3.30.565.10 285 421 3.2E-20 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS12845 f116a2d2ea101db7b7db1a83192dab12 429 SMART SM00387 322 425 9.1E-13 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS12845 f116a2d2ea101db7b7db1a83192dab12 429 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 275 1.8E-8 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS12845 f116a2d2ea101db7b7db1a83192dab12 429 Gene3D G3DSA:1.10.287.130 205 274 6.0E-9 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS12845 f116a2d2ea101db7b7db1a83192dab12 429 SUPERFAMILY SSF47384 195 274 1.55E-12 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS12845 f116a2d2ea101db7b7db1a83192dab12 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 5.3E-5 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS12845 f116a2d2ea101db7b7db1a83192dab12 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 5.3E-5 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS12845 f116a2d2ea101db7b7db1a83192dab12 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 5.3E-5 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS12845 f116a2d2ea101db7b7db1a83192dab12 429 SMART SM00388 212 278 4.5E-10 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS02875 e9e9d754a24aa60375d67b82ef05b9fe 520 Pfam PF08502 LeuA allosteric (dimerisation) domain 377 504 3.9E-30 T 05-07-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AC028_RS02875 e9e9d754a24aa60375d67b82ef05b9fe 520 Pfam PF00682 HMGL-like 11 279 7.4E-91 T 05-07-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 AC028_RS02875 e9e9d754a24aa60375d67b82ef05b9fe 520 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 9 513 40.201 T 05-07-2017 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AC028_RS02875 e9e9d754a24aa60375d67b82ef05b9fe 520 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 19 35 - T 05-07-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AC028_RS02875 e9e9d754a24aa60375d67b82ef05b9fe 520 SUPERFAMILY SSF51569 8 298 6.47E-95 T 05-07-2017 AC028_RS02875 e9e9d754a24aa60375d67b82ef05b9fe 520 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 11 501 3.8E-195 T 05-07-2017 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AC028_RS02875 e9e9d754a24aa60375d67b82ef05b9fe 520 Gene3D G3DSA:3.20.20.70 7 353 1.3E-139 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS02875 e9e9d754a24aa60375d67b82ef05b9fe 520 SUPERFAMILY SSF110921 417 503 4.32E-21 T 05-07-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AC028_RS02875 e9e9d754a24aa60375d67b82ef05b9fe 520 SMART SM00917 376 504 3.0E-29 T 05-07-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AC028_RS02875 e9e9d754a24aa60375d67b82ef05b9fe 520 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 206 219 - T 05-07-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AC028_RS00310 bc731a32c2ab7698ba0621d93a1420c2 152 Pfam PF02082 Transcriptional regulator 3 82 5.1E-22 T 05-07-2017 IPR000944 Transcription regulator Rrf2-type AC028_RS00310 bc731a32c2ab7698ba0621d93a1420c2 152 TIGRFAM TIGR02944 suf_reg_Xantho: FeS assembly SUF system regulator 1 130 1.1E-62 T 05-07-2017 IPR014290 SUF system FeS cluster assembly regulator AC028_RS00310 bc731a32c2ab7698ba0621d93a1420c2 152 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 131 1.4E-30 T 05-07-2017 IPR000944 Transcription regulator Rrf2-type AC028_RS00310 bc731a32c2ab7698ba0621d93a1420c2 152 Gene3D G3DSA:1.10.10.10 3 134 3.6E-37 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS00310 bc731a32c2ab7698ba0621d93a1420c2 152 SUPERFAMILY SSF46785 3 133 1.37E-32 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS11830 960ded60d67d1c4dd6d2623fc37ca7be 204 SUPERFAMILY SSF52833 1 78 5.04E-16 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS11830 960ded60d67d1c4dd6d2623fc37ca7be 204 SUPERFAMILY SSF47616 79 202 1.0E-21 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS11830 960ded60d67d1c4dd6d2623fc37ca7be 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 124 190 6.2E-10 T 05-07-2017 IPR004046 Glutathione S-transferase, C-terminal AC028_RS11830 960ded60d67d1c4dd6d2623fc37ca7be 204 Gene3D G3DSA:1.20.1050.10 88 190 3.5E-24 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS11830 960ded60d67d1c4dd6d2623fc37ca7be 204 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 70 6.2E-9 T 05-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AC028_RS11830 960ded60d67d1c4dd6d2623fc37ca7be 204 Gene3D G3DSA:3.40.30.10 1 87 1.8E-20 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS14255 69dacf897669fcba132176b66617eafb 302 Gene3D G3DSA:1.10.10.10 1 78 4.6E-22 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS14255 69dacf897669fcba132176b66617eafb 302 SUPERFAMILY SSF46785 2 105 2.5E-21 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS14255 69dacf897669fcba132176b66617eafb 302 Gene3D G3DSA:3.40.190.10 86 168 3.6E-24 T 05-07-2017 AC028_RS14255 69dacf897669fcba132176b66617eafb 302 SUPERFAMILY SSF53850 84 293 1.34E-41 T 05-07-2017 AC028_RS14255 69dacf897669fcba132176b66617eafb 302 Gene3D G3DSA:3.40.190.10 169 258 7.4E-18 T 05-07-2017 AC028_RS14255 69dacf897669fcba132176b66617eafb 302 Pfam PF03466 LysR substrate binding domain 83 288 7.8E-40 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS14255 69dacf897669fcba132176b66617eafb 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 56 3.2E-17 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS17555 aababf70663c47278719c20e03c0f51f 497 Gene3D G3DSA:3.30.420.40 252 489 6.7E-44 T 05-07-2017 AC028_RS17555 aababf70663c47278719c20e03c0f51f 497 TIGRFAM TIGR01312 XylB: xylulokinase 5 487 2.2E-158 T 05-07-2017 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 AC028_RS17555 aababf70663c47278719c20e03c0f51f 497 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 248 1.9E-55 T 05-07-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AC028_RS17555 aababf70663c47278719c20e03c0f51f 497 PIRSF PIRSF000538 1 497 1.6E-111 T 05-07-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AC028_RS17555 aababf70663c47278719c20e03c0f51f 497 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 352 373 - T 05-07-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AC028_RS17555 aababf70663c47278719c20e03c0f51f 497 SUPERFAMILY SSF53067 252 494 1.2E-53 T 05-07-2017 AC028_RS17555 aababf70663c47278719c20e03c0f51f 497 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 441 1.3E-31 T 05-07-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AC028_RS17555 aababf70663c47278719c20e03c0f51f 497 Gene3D G3DSA:3.30.420.40 1 249 1.8E-49 T 05-07-2017 AC028_RS17555 aababf70663c47278719c20e03c0f51f 497 SUPERFAMILY SSF53067 1 248 3.4E-55 T 05-07-2017 AC028_RS20365 13ffb444cd848f1876a80defebd341c0 689 Pfam PF00563 EAL domain 447 679 3.6E-52 T 05-07-2017 IPR001633 EAL domain AC028_RS20365 13ffb444cd848f1876a80defebd341c0 689 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 267 427 4.0E-16 T 05-07-2017 IPR000160 GGDEF domain AC028_RS20365 13ffb444cd848f1876a80defebd341c0 689 SUPERFAMILY SSF52172 9 154 1.99E-6 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS20365 13ffb444cd848f1876a80defebd341c0 689 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 418 4.1E-17 T 05-07-2017 IPR000160 GGDEF domain AC028_RS20365 13ffb444cd848f1876a80defebd341c0 689 Gene3D G3DSA:3.30.70.270 271 435 4.8E-26 T 05-07-2017 AC028_RS20365 13ffb444cd848f1876a80defebd341c0 689 SMART SM00267 258 429 7.0E-8 T 05-07-2017 IPR000160 GGDEF domain AC028_RS20365 13ffb444cd848f1876a80defebd341c0 689 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 248 3.5E-7 T 05-07-2017 IPR000014 PAS domain AC028_RS20365 13ffb444cd848f1876a80defebd341c0 689 SUPERFAMILY SSF55073 275 431 5.26E-22 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS20365 13ffb444cd848f1876a80defebd341c0 689 Gene3D G3DSA:3.40.50.2300 7 120 2.8E-4 T 05-07-2017 AC028_RS20365 13ffb444cd848f1876a80defebd341c0 689 SMART SM00052 441 685 7.4E-26 T 05-07-2017 IPR001633 EAL domain AC028_RS20365 13ffb444cd848f1876a80defebd341c0 689 Gene3D G3DSA:3.20.20.450 445 681 4.4E-52 T 05-07-2017 IPR001633 EAL domain AC028_RS20365 13ffb444cd848f1876a80defebd341c0 689 SUPERFAMILY SSF141868 447 680 2.62E-47 T 05-07-2017 IPR001633 EAL domain AC028_RS20365 13ffb444cd848f1876a80defebd341c0 689 Pfam PF13188 PAS domain 148 200 5.0E-4 T 05-07-2017 IPR000014 PAS domain AC028_RS20365 13ffb444cd848f1876a80defebd341c0 689 SUPERFAMILY SSF55785 132 251 3.24E-12 T 05-07-2017 IPR000014 PAS domain AC028_RS20365 13ffb444cd848f1876a80defebd341c0 689 Gene3D G3DSA:3.30.450.20 132 251 8.4E-12 T 05-07-2017 AC028_RS02740 1eeddd894be55661e8f511c16cd5bad0 290 PRINTS PR00169 Potassium channel signature 189 211 3.8E-28 T 05-07-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AC028_RS02740 1eeddd894be55661e8f511c16cd5bad0 290 PRINTS PR00169 Potassium channel signature 131 157 3.8E-28 T 05-07-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AC028_RS02740 1eeddd894be55661e8f511c16cd5bad0 290 PRINTS PR00169 Potassium channel signature 95 115 3.8E-28 T 05-07-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AC028_RS02740 1eeddd894be55661e8f511c16cd5bad0 290 PRINTS PR00169 Potassium channel signature 218 244 3.8E-28 T 05-07-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AC028_RS02740 1eeddd894be55661e8f511c16cd5bad0 290 PRINTS PR00169 Potassium channel signature 160 183 3.8E-28 T 05-07-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AC028_RS02740 1eeddd894be55661e8f511c16cd5bad0 290 PRINTS PR00169 Potassium channel signature 69 92 3.8E-28 T 05-07-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AC028_RS02740 1eeddd894be55661e8f511c16cd5bad0 290 PRINTS PR00169 Potassium channel signature 27 55 3.8E-28 T 05-07-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AC028_RS02740 1eeddd894be55661e8f511c16cd5bad0 290 SUPERFAMILY SSF81324 30 244 4.32E-53 T 05-07-2017 AC028_RS02740 1eeddd894be55661e8f511c16cd5bad0 290 Gene3D G3DSA:1.10.287.70 36 244 1.1E-51 T 05-07-2017 AC028_RS02740 1eeddd894be55661e8f511c16cd5bad0 290 Pfam PF00520 Ion transport protein 34 241 2.8E-31 T 05-07-2017 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 05-07-2017 IPR028299 ClpA/B, conserved site 2 AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 Gene3D G3DSA:3.40.50.300 550 780 2.3E-59 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 769 849 2.5E-26 T 05-07-2017 IPR019489 Clp ATPase, C-terminal AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 SMART SM01086 769 858 5.2E-38 T 05-07-2017 IPR019489 Clp ATPase, C-terminal AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 Gene3D G3DSA:1.10.8.60 343 429 3.6E-37 T 05-07-2017 AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 05-07-2017 IPR018368 ClpA/B, conserved site 1 GO:0005524 AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 SUPERFAMILY SSF81923 4 156 5.3E-40 T 05-07-2017 IPR004176 Clp, N-terminal GO:0019538 AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 SUPERFAMILY SSF52540 546 858 2.68E-82 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.2E-42 T 05-07-2017 IPR001270 ClpA/B family GO:0005524 AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.2E-42 T 05-07-2017 IPR001270 ClpA/B family GO:0005524 AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.2E-42 T 05-07-2017 IPR001270 ClpA/B family GO:0005524 AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.2E-42 T 05-07-2017 IPR001270 ClpA/B family GO:0005524 AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 Gene3D G3DSA:3.40.50.300 160 341 9.8E-50 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 336 3.9E-13 T 05-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 Gene3D G3DSA:1.10.1780.10 1 147 1.1E-42 T 05-07-2017 IPR004176 Clp, N-terminal GO:0019538 AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 858 0.0 T 05-07-2017 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 SUPERFAMILY SSF52540 159 545 3.82E-100 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 SMART SM00382 198 344 2.6E-11 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 SMART SM00382 597 770 1.2E-10 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 763 1.5E-55 T 05-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 4.3E-8 T 05-07-2017 IPR004176 Clp, N-terminal GO:0019538 AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 5.7E-12 T 05-07-2017 IPR004176 Clp, N-terminal GO:0019538 AC028_RS01690 c05244c2bbad3ea9fc58f1dca5beb219 861 Gene3D G3DSA:1.10.8.60 781 859 1.3E-30 T 05-07-2017 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 Gene3D G3DSA:3.20.20.10 66 327 1.5E-53 T 05-07-2017 IPR029066 PLP-binding barrel AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 270 286 - T 05-07-2017 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 PIRSF PIRSF001336 1 625 3.6E-239 T 05-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 412 553 5.8E-24 T 05-07-2017 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 329 348 2.2E-15 T 05-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 96 114 2.2E-15 T 05-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 235 248 2.2E-15 T 05-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 534 547 2.2E-15 T 05-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 119 131 2.2E-15 T 05-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 SUPERFAMILY SSF51419 64 341 5.79E-62 T 05-07-2017 IPR029066 PLP-binding barrel AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 80 340 3.5E-46 T 05-07-2017 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 PRINTS PR01180 Arginine decarboxylase signature 481 506 3.1E-67 T 05-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 PRINTS PR01180 Arginine decarboxylase signature 64 79 3.1E-67 T 05-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 PRINTS PR01180 Arginine decarboxylase signature 168 189 3.1E-67 T 05-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 PRINTS PR01180 Arginine decarboxylase signature 534 555 3.1E-67 T 05-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 PRINTS PR01180 Arginine decarboxylase signature 456 477 3.1E-67 T 05-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 PRINTS PR01180 Arginine decarboxylase signature 88 102 3.1E-67 T 05-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 PRINTS PR01180 Arginine decarboxylase signature 142 157 3.1E-67 T 05-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 PRINTS PR01180 Arginine decarboxylase signature 192 214 3.1E-67 T 05-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 PRINTS PR01180 Arginine decarboxylase signature 319 336 3.1E-67 T 05-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 SUPERFAMILY SSF50621 448 558 6.7E-7 T 05-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 TIGRFAM TIGR01273 speA: arginine decarboxylase 4 623 9.6E-261 T 05-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 Gene3D G3DSA:2.40.37.10 447 574 3.1E-15 T 05-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 Gene3D G3DSA:2.40.37.10 328 352 3.1E-15 T 05-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AC028_RS04000 e3d971de9b43b5d5cc16881ddeb9d6fc 628 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 2 624 42.715 T 05-07-2017 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AC028_RS13000 0f7a4d569ad3974d5ae68e2f6e271f21 530 PIRSF PIRSF002869 1 529 2.2E-142 T 05-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ AC028_RS13000 0f7a4d569ad3974d5ae68e2f6e271f21 530 PRINTS PR01806 Virulence factor MviN signature 50 66 8.3E-71 T 05-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ AC028_RS13000 0f7a4d569ad3974d5ae68e2f6e271f21 530 PRINTS PR01806 Virulence factor MviN signature 355 374 8.3E-71 T 05-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ AC028_RS13000 0f7a4d569ad3974d5ae68e2f6e271f21 530 PRINTS PR01806 Virulence factor MviN signature 31 50 8.3E-71 T 05-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ AC028_RS13000 0f7a4d569ad3974d5ae68e2f6e271f21 530 PRINTS PR01806 Virulence factor MviN signature 430 447 8.3E-71 T 05-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ AC028_RS13000 0f7a4d569ad3974d5ae68e2f6e271f21 530 PRINTS PR01806 Virulence factor MviN signature 257 283 8.3E-71 T 05-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ AC028_RS13000 0f7a4d569ad3974d5ae68e2f6e271f21 530 PRINTS PR01806 Virulence factor MviN signature 155 176 8.3E-71 T 05-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ AC028_RS13000 0f7a4d569ad3974d5ae68e2f6e271f21 530 PRINTS PR01806 Virulence factor MviN signature 131 155 8.3E-71 T 05-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ AC028_RS13000 0f7a4d569ad3974d5ae68e2f6e271f21 530 Pfam PF03023 MviN-like protein 26 492 5.4E-121 T 05-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ AC028_RS13000 0f7a4d569ad3974d5ae68e2f6e271f21 530 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 512 5.6E-118 T 05-07-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ AC028_RS01520 ba90b0be39e49e3bd33a297d4141239d 291 Gene3D G3DSA:3.40.190.10 179 257 4.0E-22 T 05-07-2017 AC028_RS01520 ba90b0be39e49e3bd33a297d4141239d 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.6E-21 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS01520 ba90b0be39e49e3bd33a297d4141239d 291 SUPERFAMILY SSF53850 93 286 5.97E-38 T 05-07-2017 AC028_RS01520 ba90b0be39e49e3bd33a297d4141239d 291 Pfam PF03466 LysR substrate binding domain 92 286 2.5E-39 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS01520 ba90b0be39e49e3bd33a297d4141239d 291 SUPERFAMILY SSF46785 3 86 4.09E-23 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS01520 ba90b0be39e49e3bd33a297d4141239d 291 Gene3D G3DSA:3.40.190.10 95 178 9.0E-31 T 05-07-2017 AC028_RS01520 ba90b0be39e49e3bd33a297d4141239d 291 Gene3D G3DSA:1.10.10.10 3 86 8.8E-28 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS01520 ba90b0be39e49e3bd33a297d4141239d 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.7E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS01520 ba90b0be39e49e3bd33a297d4141239d 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.7E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS01520 ba90b0be39e49e3bd33a297d4141239d 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.7E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS15800 41558d3954b10e51bbc79f850a6e0b17 324 SMART SM00267 155 323 6.1E-52 T 05-07-2017 IPR000160 GGDEF domain AC028_RS15800 41558d3954b10e51bbc79f850a6e0b17 324 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 162 323 2.9E-41 T 05-07-2017 IPR000160 GGDEF domain AC028_RS15800 41558d3954b10e51bbc79f850a6e0b17 324 Gene3D G3DSA:3.30.70.270 168 323 3.5E-45 T 05-07-2017 AC028_RS15800 41558d3954b10e51bbc79f850a6e0b17 324 SUPERFAMILY SSF55073 171 322 8.63E-41 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS15800 41558d3954b10e51bbc79f850a6e0b17 324 Pfam PF00990 Diguanylate cyclase, GGDEF domain 166 318 5.6E-37 T 05-07-2017 IPR000160 GGDEF domain AC028_RS19775 f2d6c0f7b2fa72bad59e363b993c4f18 179 SUPERFAMILY SSF55729 1 164 3.43E-30 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS19775 f2d6c0f7b2fa72bad59e363b993c4f18 179 Pfam PF13420 Acetyltransferase (GNAT) domain 5 158 5.2E-26 T 05-07-2017 AC028_RS19775 f2d6c0f7b2fa72bad59e363b993c4f18 179 Gene3D G3DSA:3.40.630.30 1 168 2.8E-39 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS07920 1faf6a5eaefe0a6e8182c443d6c188e4 389 Pfam PF00270 DEAD/DEAH box helicase 29 198 2.0E-46 T 05-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AC028_RS07920 1faf6a5eaefe0a6e8182c443d6c188e4 389 SMART SM00487 24 227 5.2E-58 T 05-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_RS07920 1faf6a5eaefe0a6e8182c443d6c188e4 389 Gene3D G3DSA:3.40.50.300 217 277 1.6E-8 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07920 1faf6a5eaefe0a6e8182c443d6c188e4 389 Gene3D G3DSA:3.40.50.300 278 326 6.8E-15 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07920 1faf6a5eaefe0a6e8182c443d6c188e4 389 Gene3D G3DSA:3.40.50.300 1 216 1.4E-74 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07920 1faf6a5eaefe0a6e8182c443d6c188e4 389 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 158 166 - T 05-07-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AC028_RS07920 1faf6a5eaefe0a6e8182c443d6c188e4 389 SUPERFAMILY SSF52540 151 340 1.32E-27 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07920 1faf6a5eaefe0a6e8182c443d6c188e4 389 SUPERFAMILY SSF52540 1 214 2.95E-65 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07920 1faf6a5eaefe0a6e8182c443d6c188e4 389 Pfam PF00271 Helicase conserved C-terminal domain 278 303 1.3E-4 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS17825 3e54c6c86b4d30b4b38ac0ee842e9f33 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 255 4.1E-101 T 05-07-2017 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AC028_RS17825 3e54c6c86b4d30b4b38ac0ee842e9f33 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 255 43.821 T 05-07-2017 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AC028_RS17825 3e54c6c86b4d30b4b38ac0ee842e9f33 258 Pfam PF00977 Histidine biosynthesis protein 5 238 4.5E-72 T 05-07-2017 IPR006062 Histidine biosynthesis GO:0000105 AC028_RS17825 3e54c6c86b4d30b4b38ac0ee842e9f33 258 SUPERFAMILY SSF51366 1 255 2.67E-71 T 05-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AC028_RS17825 3e54c6c86b4d30b4b38ac0ee842e9f33 258 Gene3D G3DSA:3.20.20.70 4 255 3.4E-83 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS17795 2d5c7b4056af3d3f68eea5595682e067 304 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 12 304 31.475 T 05-07-2017 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 AC028_RS17795 2d5c7b4056af3d3f68eea5595682e067 304 Gene3D G3DSA:3.40.190.10 10 145 1.4E-45 T 05-07-2017 AC028_RS17795 2d5c7b4056af3d3f68eea5595682e067 304 SUPERFAMILY SSF53850 12 228 1.56E-61 T 05-07-2017 AC028_RS17795 2d5c7b4056af3d3f68eea5595682e067 304 Pfam PF01634 ATP phosphoribosyltransferase 60 224 4.1E-44 T 05-07-2017 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AC028_RS17795 2d5c7b4056af3d3f68eea5595682e067 304 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 13 201 7.6E-54 T 05-07-2017 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AC028_RS17795 2d5c7b4056af3d3f68eea5595682e067 304 Gene3D G3DSA:3.30.70.120 233 302 6.7E-4 T 05-07-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AC028_RS17795 2d5c7b4056af3d3f68eea5595682e067 304 Pfam PF08029 HisG, C-terminal domain 230 301 1.8E-7 T 05-07-2017 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AC028_RS17795 2d5c7b4056af3d3f68eea5595682e067 304 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 162 183 - T 05-07-2017 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 AC028_RS17795 2d5c7b4056af3d3f68eea5595682e067 304 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 206 302 5.4E-17 T 05-07-2017 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AC028_RS21855 9148b66c1f021dd9ce3f35e91977d747 713 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 537 553 2.5E-23 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS21855 9148b66c1f021dd9ce3f35e91977d747 713 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 611 622 2.5E-23 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS21855 9148b66c1f021dd9ce3f35e91977d747 713 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 516 528 2.5E-23 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS21855 9148b66c1f021dd9ce3f35e91977d747 713 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 498 510 2.5E-23 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS21855 9148b66c1f021dd9ce3f35e91977d747 713 Pfam PF01431 Peptidase family M13 506 710 4.2E-69 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS21855 9148b66c1f021dd9ce3f35e91977d747 713 SUPERFAMILY SSF55486 68 713 2.2E-203 T 05-07-2017 AC028_RS21855 9148b66c1f021dd9ce3f35e91977d747 713 Gene3D G3DSA:3.40.390.10 497 713 1.4E-105 T 05-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AC028_RS21855 9148b66c1f021dd9ce3f35e91977d747 713 Gene3D G3DSA:3.40.390.10 336 457 1.4E-105 T 05-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AC028_RS21855 9148b66c1f021dd9ce3f35e91977d747 713 Pfam PF05649 Peptidase family M13 78 454 1.9E-92 T 05-07-2017 IPR008753 Peptidase M13, N-terminal domain GO:0006508 AC028_RS07685 03d13ecc61da0d59ac926b058146d839 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 13.714 T 05-07-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS07685 03d13ecc61da0d59ac926b058146d839 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 1.6E-23 T 05-07-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS07685 03d13ecc61da0d59ac926b058146d839 55 Pfam PF00471 Ribosomal protein L33 8 53 1.2E-17 T 05-07-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS07685 03d13ecc61da0d59ac926b058146d839 55 SUPERFAMILY SSF57829 1 53 2.56E-19 T 05-07-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 AC028_RS07685 03d13ecc61da0d59ac926b058146d839 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 05-07-2017 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS15015 8c146801ff702747551a301c0587caa4 388 SUPERFAMILY SSF55718 265 388 9.42E-26 T 05-07-2017 IPR003033 SCP2 sterol-binding domain AC028_RS15015 8c146801ff702747551a301c0587caa4 388 SUPERFAMILY SSF56281 2 258 9.8E-81 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS15015 8c146801ff702747551a301c0587caa4 388 Gene3D G3DSA:3.60.15.10 2 111 1.2E-11 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS15015 8c146801ff702747551a301c0587caa4 388 Gene3D G3DSA:3.30.1050.10 271 374 6.4E-5 T 05-07-2017 IPR003033 SCP2 sterol-binding domain AC028_RS15015 8c146801ff702747551a301c0587caa4 388 Pfam PF14863 Alkyl sulfatase dimerisation 117 256 1.2E-57 T 05-07-2017 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 AC028_RS15015 8c146801ff702747551a301c0587caa4 388 Pfam PF14864 Alkyl sulfatase C-terminal 264 388 5.6E-33 T 05-07-2017 IPR029229 Alkyl sulfatase, C-terminal AC028_RS02980 82a84be377dd5d1ccf5bb9a837e9428a 216 SUPERFAMILY SSF52266 6 200 8.25E-30 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS02980 82a84be377dd5d1ccf5bb9a837e9428a 216 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 12 192 2.6E-25 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS02980 82a84be377dd5d1ccf5bb9a837e9428a 216 Gene3D G3DSA:3.40.50.1110 7 201 3.4E-25 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS00505 f81e74a879a2dedf89b84421892d3da2 105 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 1.3E-25 T 05-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AC028_RS00505 f81e74a879a2dedf89b84421892d3da2 105 SUPERFAMILY SSF69754 1 99 1.96E-30 T 05-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AC028_RS00505 f81e74a879a2dedf89b84421892d3da2 105 Gene3D G3DSA:3.30.160.100 1 95 6.6E-30 T 05-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AC028_RS00505 f81e74a879a2dedf89b84421892d3da2 105 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 4.1E-23 T 05-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AC028_RS21600 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 SUPERFAMILY SSF142019 19 252 3.27E-78 T 05-07-2017 AC028_RS21600 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 346 426 9.7E-30 T 05-07-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21600 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 SUPERFAMILY SSF142984 255 338 5.36E-22 T 05-07-2017 AC028_RS21600 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 SUPERFAMILY SSF140490 339 437 4.71E-35 T 05-07-2017 AC028_RS21600 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 356 367 - T 05-07-2017 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21600 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 SMART SM00928 343 388 4.4E-26 T 05-07-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21600 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 21 429 4.4E-198 T 05-07-2017 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21600 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 Pfam PF10531 SLBB domain 257 305 7.4E-11 T 05-07-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21600 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 62 233 2.2E-42 T 05-07-2017 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21600 c6ff9ad2b6c8867cb35cef43ae2e98f9 444 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 181 196 - T 05-07-2017 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS00980 93fac9b475c44712d2dd6e45fdd354f0 369 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 266 353 1.4E-17 T 05-07-2017 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AC028_RS00980 93fac9b475c44712d2dd6e45fdd354f0 369 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 259 1.0E-89 T 05-07-2017 IPR006222 Glycine cleavage T-protein-like, N-terminal AC028_RS00980 93fac9b475c44712d2dd6e45fdd354f0 369 Gene3D G3DSA:2.40.30.110 283 362 6.3E-24 T 05-07-2017 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AC028_RS00980 93fac9b475c44712d2dd6e45fdd354f0 369 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 45.788 T 05-07-2017 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AC028_RS00980 93fac9b475c44712d2dd6e45fdd354f0 369 PIRSF PIRSF006487 1 364 1.7E-85 T 05-07-2017 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AC028_RS00980 93fac9b475c44712d2dd6e45fdd354f0 369 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 358 1.2E-130 T 05-07-2017 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AC028_RS00980 93fac9b475c44712d2dd6e45fdd354f0 369 SUPERFAMILY SSF101790 275 361 5.72E-21 T 05-07-2017 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AC028_RS00980 93fac9b475c44712d2dd6e45fdd354f0 369 Gene3D G3DSA:3.30.1360.120 3 53 8.2E-52 T 05-07-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AC028_RS00980 93fac9b475c44712d2dd6e45fdd354f0 369 Gene3D G3DSA:3.30.1360.120 144 236 8.2E-52 T 05-07-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AC028_RS00980 93fac9b475c44712d2dd6e45fdd354f0 369 SUPERFAMILY SSF103025 3 281 3.81E-94 T 05-07-2017 AC028_RS00980 93fac9b475c44712d2dd6e45fdd354f0 369 Gene3D G3DSA:3.30.70.1400 54 137 2.2E-32 T 05-07-2017 AC028_RS20430 8ab23d729a5b2866d211e448d0587363 445 Pfam PF13742 OB-fold nucleic acid binding domain 12 101 4.4E-27 T 05-07-2017 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AC028_RS20430 8ab23d729a5b2866d211e448d0587363 445 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 12 356 2.5E-127 T 05-07-2017 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AC028_RS20430 8ab23d729a5b2866d211e448d0587363 445 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 6 441 30.543 T 05-07-2017 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AC028_RS20430 8ab23d729a5b2866d211e448d0587363 445 Pfam PF02601 Exonuclease VII, large subunit 125 438 5.6E-93 T 05-07-2017 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AC028_RS14020 0c54d6d8eb2e2cc901683f0270d79392 436 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 43 434 1.4E-97 T 05-07-2017 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AC028_RS14020 0c54d6d8eb2e2cc901683f0270d79392 436 Gene3D G3DSA:1.10.940.10 11 149 2.4E-29 T 05-07-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AC028_RS14020 0c54d6d8eb2e2cc901683f0270d79392 436 Pfam PF01189 16S rRNA methyltransferase RsmB/F 242 432 3.2E-52 T 05-07-2017 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AC028_RS14020 0c54d6d8eb2e2cc901683f0270d79392 436 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 318 329 - T 05-07-2017 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AC028_RS14020 0c54d6d8eb2e2cc901683f0270d79392 436 Gene3D G3DSA:3.30.70.1170 173 230 1.5E-21 T 05-07-2017 AC028_RS14020 0c54d6d8eb2e2cc901683f0270d79392 436 SUPERFAMILY SSF48013 12 148 2.78E-24 T 05-07-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AC028_RS14020 0c54d6d8eb2e2cc901683f0270d79392 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 319 331 5.8E-27 T 05-07-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AC028_RS14020 0c54d6d8eb2e2cc901683f0270d79392 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 5.8E-27 T 05-07-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AC028_RS14020 0c54d6d8eb2e2cc901683f0270d79392 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 5.8E-27 T 05-07-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AC028_RS14020 0c54d6d8eb2e2cc901683f0270d79392 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 369 385 5.8E-27 T 05-07-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AC028_RS14020 0c54d6d8eb2e2cc901683f0270d79392 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 417 434 5.8E-27 T 05-07-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AC028_RS14020 0c54d6d8eb2e2cc901683f0270d79392 436 Gene3D G3DSA:3.40.50.150 234 434 7.4E-48 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS14020 0c54d6d8eb2e2cc901683f0270d79392 436 Pfam PF01029 NusB family 12 133 8.8E-17 T 05-07-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AC028_RS14020 0c54d6d8eb2e2cc901683f0270d79392 436 SUPERFAMILY SSF53335 144 434 4.34E-63 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS09590 a176ee3570c75c3fb9e7a0f9255f8a0b 259 Pfam PF01145 SPFH domain / Band 7 family 19 204 1.3E-18 T 05-07-2017 IPR001107 Band 7 domain AC028_RS09590 a176ee3570c75c3fb9e7a0f9255f8a0b 259 SUPERFAMILY SSF117892 53 188 8.11E-10 T 05-07-2017 IPR001107 Band 7 domain AC028_RS14410 e8b50cd833cd2f8ff6057a51cfb32af6 126 SMART SM00448 9 117 1.5E-5 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS14410 e8b50cd833cd2f8ff6057a51cfb32af6 126 Gene3D G3DSA:3.40.50.2300 9 121 6.4E-14 T 05-07-2017 AC028_RS14410 e8b50cd833cd2f8ff6057a51cfb32af6 126 SUPERFAMILY SSF52172 9 121 1.99E-15 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS14410 e8b50cd833cd2f8ff6057a51cfb32af6 126 Pfam PF00072 Response regulator receiver domain 11 91 2.1E-5 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS21495 73f9fa996c34d3c86b95775d4db558a0 381 SUPERFAMILY SSF51246 304 369 2.12E-14 T 05-07-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS21495 73f9fa996c34d3c86b95775d4db558a0 381 Pfam PF02222 ATP-grasp domain 107 279 2.7E-59 T 05-07-2017 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AC028_RS21495 73f9fa996c34d3c86b95775d4db558a0 381 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 352 5.9E-117 T 05-07-2017 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AC028_RS21495 73f9fa996c34d3c86b95775d4db558a0 381 SUPERFAMILY SSF52440 3 95 9.5E-23 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS21495 73f9fa996c34d3c86b95775d4db558a0 381 Gene3D G3DSA:3.30.470.20 181 355 6.3E-63 T 05-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AC028_RS21495 73f9fa996c34d3c86b95775d4db558a0 381 Gene3D G3DSA:3.40.50.20 2 106 8.3E-31 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS21495 73f9fa996c34d3c86b95775d4db558a0 381 Gene3D G3DSA:3.30.1490.20 113 180 6.5E-23 T 05-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AC028_RS21495 73f9fa996c34d3c86b95775d4db558a0 381 SUPERFAMILY SSF56059 98 299 3.36E-64 T 05-07-2017 AC028_RS21495 73f9fa996c34d3c86b95775d4db558a0 381 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 351 42.227 T 05-07-2017 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 Gene3D G3DSA:3.30.70.870 410 485 5.1E-40 T 05-07-2017 AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 SMART SM00838 614 701 4.3E-54 T 05-07-2017 IPR000640 Translation elongation factor EFG, V domain AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 SUPERFAMILY SSF50447 310 407 1.19E-35 T 05-07-2017 IPR009000 Translation protein, beta-barrel domain AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 SUPERFAMILY SSF50447 255 281 1.19E-35 T 05-07-2017 IPR009000 Translation protein, beta-barrel domain AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 05-07-2017 IPR031157 Tr-type G domain, conserved site AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 Pfam PF03764 Elongation factor G, domain IV 484 612 2.0E-42 T 05-07-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 Pfam PF00679 Elongation factor G C-terminus 614 700 7.9E-29 T 05-07-2017 IPR000640 Translation elongation factor EFG, V domain AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 186 2.8E-32 T 05-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 Hamap MF_00054_B Elongation factor G [fusA]. 6 705 108.596 T 05-07-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 SUPERFAMILY SSF54211 484 613 7.59E-40 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 Gene3D G3DSA:3.30.70.240 613 699 1.6E-31 T 05-07-2017 IPR000640 Translation elongation factor EFG, V domain AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 SUPERFAMILY SSF54980 617 703 1.92E-28 T 05-07-2017 IPR009022 Elongation factor G, III-V domain AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 SUPERFAMILY SSF54980 409 486 5.76E-26 T 05-07-2017 IPR009022 Elongation factor G, III-V domain AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 Gene3D G3DSA:3.30.230.10 489 612 5.5E-45 T 05-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 SMART SM00889 485 612 1.9E-68 T 05-07-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 6.5E-66 T 05-07-2017 AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 704 0.0 T 05-07-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.8E-15 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.8E-15 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.8E-15 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.8E-15 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.8E-15 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 Pfam PF03144 Elongation factor Tu domain 2 329 396 1.8E-18 T 05-07-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 Gene3D G3DSA:3.40.50.300 6 293 1.6E-105 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 SUPERFAMILY SSF52540 6 288 1.86E-107 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 Gene3D G3DSA:2.40.30.10 313 409 7.7E-38 T 05-07-2017 AC028_RS11625 462adb51d642523c4da9a111af7f5407 705 Pfam PF14492 Elongation Factor G, domain II 409 483 2.4E-35 T 05-07-2017 IPR009022 Elongation factor G, III-V domain AC028_RS00015 9ecb2f36ec6d7674f02273f2024dffac 375 PIRSF PIRSF000876 18 375 1.6E-132 T 05-07-2017 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AC028_RS00015 9ecb2f36ec6d7674f02273f2024dffac 375 Gene3D G3DSA:3.40.50.180 185 374 1.1E-81 T 05-07-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AC028_RS00015 9ecb2f36ec6d7674f02273f2024dffac 375 Pfam PF00072 Response regulator receiver domain 24 125 3.0E-22 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS00015 9ecb2f36ec6d7674f02273f2024dffac 375 Pfam PF01339 CheB methylesterase 192 370 1.7E-60 T 05-07-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AC028_RS00015 9ecb2f36ec6d7674f02273f2024dffac 375 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 21 375 39.92 T 05-07-2017 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AC028_RS00015 9ecb2f36ec6d7674f02273f2024dffac 375 SUPERFAMILY SSF52172 19 153 3.42E-27 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS00015 9ecb2f36ec6d7674f02273f2024dffac 375 SMART SM00448 21 144 2.6E-20 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS00015 9ecb2f36ec6d7674f02273f2024dffac 375 Gene3D G3DSA:3.40.50.2300 16 151 4.8E-28 T 05-07-2017 AC028_RS00015 9ecb2f36ec6d7674f02273f2024dffac 375 SUPERFAMILY SSF52738 187 373 4.05E-70 T 05-07-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AC028_RS07335 a23b9463f41e03461d93777eba30b4b8 895 Gene3D G3DSA:3.40.50.970 59 473 7.6E-147 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS07335 a23b9463f41e03461d93777eba30b4b8 895 SUPERFAMILY SSF52518 60 472 5.89E-133 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS07335 a23b9463f41e03461d93777eba30b4b8 895 SUPERFAMILY SSF52518 480 704 9.25E-90 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS07335 a23b9463f41e03461d93777eba30b4b8 895 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 9 893 0.0 T 05-07-2017 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AC028_RS07335 a23b9463f41e03461d93777eba30b4b8 895 PIRSF PIRSF000156 1 895 0.0 T 05-07-2017 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AC028_RS07335 a23b9463f41e03461d93777eba30b4b8 895 SUPERFAMILY SSF52922 706 893 4.28E-59 T 05-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AC028_RS07335 a23b9463f41e03461d93777eba30b4b8 895 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 139 294 1.2E-7 T 05-07-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AC028_RS07335 a23b9463f41e03461d93777eba30b4b8 895 Gene3D G3DSA:3.40.50.920 711 893 2.4E-75 T 05-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AC028_RS07335 a23b9463f41e03461d93777eba30b4b8 895 Gene3D G3DSA:3.40.50.970 478 709 5.0E-108 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS22150 30b24ddf811b65d05a377f07d88e2080 365 Gene3D G3DSA:1.10.3850.10 146 357 7.3E-56 T 05-07-2017 AC028_RS22150 30b24ddf811b65d05a377f07d88e2080 365 Gene3D G3DSA:3.30.2090.10 54 138 1.4E-10 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS22150 30b24ddf811b65d05a377f07d88e2080 365 SUPERFAMILY SSF82866 142 360 3.27E-47 T 05-07-2017 AC028_RS22150 30b24ddf811b65d05a377f07d88e2080 365 SUPERFAMILY SSF82714 54 140 3.14E-12 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS22150 30b24ddf811b65d05a377f07d88e2080 365 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 4.2E-10 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS22150 30b24ddf811b65d05a377f07d88e2080 365 PRINTS PR00702 Acriflavin resistance protein family signature 255 279 4.2E-10 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS22150 30b24ddf811b65d05a377f07d88e2080 365 PRINTS PR00702 Acriflavin resistance protein family signature 227 248 4.2E-10 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS22150 30b24ddf811b65d05a377f07d88e2080 365 Pfam PF00873 AcrB/AcrD/AcrF family 16 355 9.0E-66 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS09855 52440cbcf6be9752f654d2231c83f897 394 Pfam PF00155 Aminotransferase class I and II 39 387 3.3E-54 T 05-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AC028_RS09855 52440cbcf6be9752f654d2231c83f897 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 237 250 - T 05-07-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AC028_RS09855 52440cbcf6be9752f654d2231c83f897 394 Gene3D G3DSA:3.90.1150.10 276 394 9.1E-30 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS09855 52440cbcf6be9752f654d2231c83f897 394 Gene3D G3DSA:3.40.640.10 57 275 9.5E-62 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS09855 52440cbcf6be9752f654d2231c83f897 394 SUPERFAMILY SSF53383 12 393 2.86E-96 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS01725 12f6e678166ad9c0c4a5eb4f576b21af 719 Pfam PF00593 TonB dependent receptor 459 692 1.3E-29 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01725 12f6e678166ad9c0c4a5eb4f576b21af 719 Gene3D G3DSA:2.40.170.20 157 693 1.9E-83 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01725 12f6e678166ad9c0c4a5eb4f576b21af 719 Pfam PF07715 TonB-dependent Receptor Plug Domain 36 144 1.9E-16 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS01725 12f6e678166ad9c0c4a5eb4f576b21af 719 Gene3D G3DSA:2.170.130.10 13 152 7.8E-32 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS01725 12f6e678166ad9c0c4a5eb4f576b21af 719 SUPERFAMILY SSF56935 14 704 5.5E-118 T 05-07-2017 AC028_RS11320 ad98589c09d3ecfe7e8d11f5c09dbeb6 286 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 18 278 8.7E-73 T 05-07-2017 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AC028_RS11320 ad98589c09d3ecfe7e8d11f5c09dbeb6 286 Pfam PF05175 Methyltransferase small domain 103 194 3.7E-17 T 05-07-2017 IPR007848 Methyltransferase small domain GO:0008168 AC028_RS11320 ad98589c09d3ecfe7e8d11f5c09dbeb6 286 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 5 278 45.679 T 05-07-2017 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AC028_RS11320 ad98589c09d3ecfe7e8d11f5c09dbeb6 286 Gene3D G3DSA:3.40.50.150 88 278 1.2E-71 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS11320 ad98589c09d3ecfe7e8d11f5c09dbeb6 286 SUPERFAMILY SSF53335 20 276 1.05E-59 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS11320 ad98589c09d3ecfe7e8d11f5c09dbeb6 286 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 25 274 1.1E-90 T 05-07-2017 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AC028_RS11320 ad98589c09d3ecfe7e8d11f5c09dbeb6 286 Gene3D G3DSA:1.10.8.10 12 86 3.2E-22 T 05-07-2017 AC028_RS11320 ad98589c09d3ecfe7e8d11f5c09dbeb6 286 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 183 189 - T 05-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AC028_RS02920 52d2bb531243fda288394ea49e7c6913 438 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 42 219 5.8E-65 T 05-07-2017 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AC028_RS02920 52d2bb531243fda288394ea49e7c6913 438 Gene3D G3DSA:3.40.50.2000 302 405 1.3E-4 T 05-07-2017 AC028_RS02920 52d2bb531243fda288394ea49e7c6913 438 SUPERFAMILY SSF53756 58 410 1.7E-19 T 05-07-2017 AC028_RS14400 c648ea044ff19c8a538b32380a4670e3 433 Pfam PF02954 Bacterial regulatory protein, Fis family 390 427 2.3E-12 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS14400 c648ea044ff19c8a538b32380a4670e3 433 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 218 233 - T 05-07-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AC028_RS14400 c648ea044ff19c8a538b32380a4670e3 433 Pfam PF00072 Response regulator receiver domain 14 118 2.5E-15 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS14400 c648ea044ff19c8a538b32380a4670e3 433 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 396 413 2.6E-6 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS14400 c648ea044ff19c8a538b32380a4670e3 433 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 413 433 2.6E-6 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS14400 c648ea044ff19c8a538b32380a4670e3 433 SUPERFAMILY SSF52540 132 371 5.59E-57 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS14400 c648ea044ff19c8a538b32380a4670e3 433 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 157 170 - T 05-07-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AC028_RS14400 c648ea044ff19c8a538b32380a4670e3 433 Gene3D G3DSA:1.10.8.60 303 377 1.9E-13 T 05-07-2017 AC028_RS14400 c648ea044ff19c8a538b32380a4670e3 433 Pfam PF00158 Sigma-54 interaction domain 133 297 2.3E-60 T 05-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AC028_RS14400 c648ea044ff19c8a538b32380a4670e3 433 Gene3D G3DSA:3.40.50.300 132 302 5.6E-50 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS14400 c648ea044ff19c8a538b32380a4670e3 433 SMART SM00448 10 120 2.6E-17 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS14400 c648ea044ff19c8a538b32380a4670e3 433 Gene3D G3DSA:1.10.10.60 385 427 5.3E-14 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS14400 c648ea044ff19c8a538b32380a4670e3 433 SMART SM00382 153 293 1.3E-8 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS14400 c648ea044ff19c8a538b32380a4670e3 433 Gene3D G3DSA:3.40.50.2300 10 123 2.1E-19 T 05-07-2017 AC028_RS14400 c648ea044ff19c8a538b32380a4670e3 433 SUPERFAMILY SSF46689 342 428 1.4E-10 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS14400 c648ea044ff19c8a538b32380a4670e3 433 SUPERFAMILY SSF52172 7 178 6.4E-26 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS00375 c422c6f59e45d704546d8db64e8d965f 308 Pfam PF02424 ApbE family 1 277 1.5E-75 T 05-07-2017 IPR024932 Flavin transferase ApbE GO:0017013 AC028_RS00375 c422c6f59e45d704546d8db64e8d965f 308 PIRSF PIRSF006268 1 304 4.7E-73 T 05-07-2017 IPR024932 Flavin transferase ApbE GO:0017013 AC028_RS00375 c422c6f59e45d704546d8db64e8d965f 308 SUPERFAMILY SSF143631 1 303 2.09E-88 T 05-07-2017 IPR003374 ApbE-like domain AC028_RS01530 7653681d376a0e132ac4c16992a9c9ec 638 Pfam PF16326 ABC transporter C-terminal domain 576 634 5.3E-9 T 05-07-2017 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AC028_RS01530 7653681d376a0e132ac4c16992a9c9ec 638 Gene3D G3DSA:3.40.50.300 1 266 1.1E-47 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01530 7653681d376a0e132ac4c16992a9c9ec 638 Gene3D G3DSA:3.40.50.300 344 551 4.3E-39 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01530 7653681d376a0e132ac4c16992a9c9ec 638 ProSitePatterns PS00211 ABC transporters family signature. 451 465 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS01530 7653681d376a0e132ac4c16992a9c9ec 638 Pfam PF00005 ABC transporter 348 479 1.9E-21 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS01530 7653681d376a0e132ac4c16992a9c9ec 638 Pfam PF00005 ABC transporter 17 178 1.3E-21 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS01530 7653681d376a0e132ac4c16992a9c9ec 638 SMART SM00382 26 223 5.8E-8 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS01530 7653681d376a0e132ac4c16992a9c9ec 638 SMART SM00382 357 531 2.9E-13 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS01530 7653681d376a0e132ac4c16992a9c9ec 638 SUPERFAMILY SSF52540 119 239 8.38E-44 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01530 7653681d376a0e132ac4c16992a9c9ec 638 SUPERFAMILY SSF52540 2 84 8.38E-44 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01530 7653681d376a0e132ac4c16992a9c9ec 638 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS01530 7653681d376a0e132ac4c16992a9c9ec 638 Pfam PF12848 ABC transporter 217 297 1.1E-22 T 05-07-2017 IPR032781 ABC-transporter extension domain AC028_RS01530 7653681d376a0e132ac4c16992a9c9ec 638 SUPERFAMILY SSF52540 343 528 5.2E-41 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19975 7b3b36b2d38ca0cb2c5e700f831e6838 343 SMART SM00382 121 253 2.2E-15 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS19975 7b3b36b2d38ca0cb2c5e700f831e6838 343 Gene3D G3DSA:3.40.50.300 81 267 5.1E-41 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19975 7b3b36b2d38ca0cb2c5e700f831e6838 343 SUPERFAMILY SSF52540 79 320 3.87E-44 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19975 7b3b36b2d38ca0cb2c5e700f831e6838 343 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 125 249 4.9E-28 T 05-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AC028_RS10060 877ddaec5d09015cf1a5aae6347e7120 337 Pfam PF04055 Radical SAM superfamily 103 267 1.7E-15 T 05-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AC028_RS10060 877ddaec5d09015cf1a5aae6347e7120 337 TIGRFAM TIGR00510 lipA: lipoyl synthase 48 330 2.4E-132 T 05-07-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AC028_RS10060 877ddaec5d09015cf1a5aae6347e7120 337 Gene3D G3DSA:3.20.20.70 67 329 1.8E-69 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS10060 877ddaec5d09015cf1a5aae6347e7120 337 SMART SM00729 97 305 2.4E-18 T 05-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AC028_RS10060 877ddaec5d09015cf1a5aae6347e7120 337 PIRSF PIRSF005963 1 336 1.1E-138 T 05-07-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AC028_RS10060 877ddaec5d09015cf1a5aae6347e7120 337 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 49 86 1.4E-8 T 05-07-2017 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AC028_RS10060 877ddaec5d09015cf1a5aae6347e7120 337 SUPERFAMILY SSF102114 66 329 6.93E-65 T 05-07-2017 AC028_RS10060 877ddaec5d09015cf1a5aae6347e7120 337 Hamap MF_00206 Lipoyl synthase [lipA]. 50 337 151.344 T 05-07-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 Gene3D G3DSA:3.30.565.10 15 213 5.9E-74 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 9.2E-18 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 SUPERFAMILY SSF56719 387 620 1.7E-74 T 05-07-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR00418 DNA topoisomerase II family signature 66 79 2.7E-57 T 05-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR00418 DNA topoisomerase II family signature 413 427 2.7E-57 T 05-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR00418 DNA topoisomerase II family signature 516 528 2.7E-57 T 05-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR00418 DNA topoisomerase II family signature 109 123 2.7E-57 T 05-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR00418 DNA topoisomerase II family signature 496 513 2.7E-57 T 05-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR00418 DNA topoisomerase II family signature 31 46 2.7E-57 T 05-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR00418 DNA topoisomerase II family signature 265 278 2.7E-57 T 05-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR00418 DNA topoisomerase II family signature 478 494 2.7E-57 T 05-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR00418 DNA topoisomerase II family signature 561 577 2.7E-57 T 05-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 ProSitePatterns PS00177 DNA topoisomerase II signature. 415 423 - T 05-07-2017 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 Pfam PF01751 Toprim domain 412 509 1.1E-11 T 05-07-2017 IPR006171 Toprim domain AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 Gene3D G3DSA:3.40.50.670 397 610 4.3E-74 T 05-07-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 SMART SM00433 34 623 2.1E-197 T 05-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.0E-97 T 05-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 361 386 1.0E-97 T 05-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 1.0E-97 T 05-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 337 360 1.0E-97 T 05-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 502 518 1.0E-97 T 05-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 447 468 1.0E-97 T 05-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 536 558 1.0E-97 T 05-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 468 480 1.0E-97 T 05-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.0E-97 T 05-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 310 325 1.0E-97 T 05-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 293 309 1.0E-97 T 05-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 1.0E-97 T 05-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 583 597 1.0E-97 T 05-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 1.0E-97 T 05-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 SUPERFAMILY SSF54211 217 380 3.22E-42 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 Gene3D G3DSA:3.30.230.10 216 389 8.9E-44 T 05-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 SUPERFAMILY SSF55874 4 215 8.49E-65 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 SMART SM00387 27 173 1.8E-19 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 619 1.5E-23 T 05-07-2017 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 627 46.115 T 05-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 Pfam PF00204 DNA gyrase B 218 383 1.0E-35 T 05-07-2017 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS17240 4994d7a4bc24a84589a2ad752aebc81c 629 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 624 2.1E-288 T 05-07-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AC028_RS02905 cda463485077c2ac24390c24419b99d4 217 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 160 214 1.7E-15 T 05-07-2017 AC028_RS02905 cda463485077c2ac24390c24419b99d4 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 1.7E-11 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS02905 cda463485077c2ac24390c24419b99d4 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 1.7E-11 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS02905 cda463485077c2ac24390c24419b99d4 217 SUPERFAMILY SSF48498 94 216 1.87E-6 T 05-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AC028_RS02905 cda463485077c2ac24390c24419b99d4 217 Gene3D G3DSA:1.10.357.10 72 216 1.2E-36 T 05-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AC028_RS02905 cda463485077c2ac24390c24419b99d4 217 SUPERFAMILY SSF46689 19 84 2.54E-18 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS02905 cda463485077c2ac24390c24419b99d4 217 Gene3D G3DSA:1.10.10.60 18 71 2.5E-21 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS02905 cda463485077c2ac24390c24419b99d4 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 74 3.3E-16 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS17335 8c2b7f75a294b8a4fea3ab4c88e388a5 300 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 56 69 - T 05-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AC028_RS17335 8c2b7f75a294b8a4fea3ab4c88e388a5 300 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 22 37 - T 05-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AC028_RS17335 8c2b7f75a294b8a4fea3ab4c88e388a5 300 Pfam PF00809 Pterin binding enzyme 23 263 4.0E-82 T 05-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AC028_RS17335 8c2b7f75a294b8a4fea3ab4c88e388a5 300 SUPERFAMILY SSF51717 14 280 1.26E-98 T 05-07-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AC028_RS17335 8c2b7f75a294b8a4fea3ab4c88e388a5 300 Gene3D G3DSA:3.20.20.20 17 280 9.9E-107 T 05-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AC028_RS17335 8c2b7f75a294b8a4fea3ab4c88e388a5 300 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 21 278 1.3E-99 T 05-07-2017 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AC028_RS20800 36170d8770495fd6293252b355337f67 219 SUPERFAMILY SSF46689 6 77 1.4E-13 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS20800 36170d8770495fd6293252b355337f67 219 SUPERFAMILY SSF48498 79 202 7.59E-13 T 05-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AC028_RS20800 36170d8770495fd6293252b355337f67 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 5.3E-6 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS20800 36170d8770495fd6293252b355337f67 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 5.3E-6 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS20800 36170d8770495fd6293252b355337f67 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 62 1.3E-9 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS20800 36170d8770495fd6293252b355337f67 219 Gene3D G3DSA:1.10.357.10 7 200 4.7E-43 T 05-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AC028_RS10475 eba543eabddbf8b191eee76cd4f68f00 207 SUPERFAMILY SSF56935 23 207 3.39E-6 T 05-07-2017 AC028_RS10475 eba543eabddbf8b191eee76cd4f68f00 207 Gene3D G3DSA:2.40.160.10 28 207 5.0E-4 T 05-07-2017 IPR023614 Porin domain AC028_RS04070 d49778612daa69b786025a0df53f4059 364 SUPERFAMILY SSF52343 145 260 1.18E-27 T 05-07-2017 AC028_RS04070 d49778612daa69b786025a0df53f4059 364 SUPERFAMILY SSF54292 264 363 5.37E-19 T 05-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AC028_RS04070 d49778612daa69b786025a0df53f4059 364 Gene3D G3DSA:3.40.50.80 147 266 2.5E-26 T 05-07-2017 AC028_RS04070 d49778612daa69b786025a0df53f4059 364 Gene3D G3DSA:3.10.20.30 267 363 6.5E-20 T 05-07-2017 IPR012675 Beta-grasp domain AC028_RS04070 d49778612daa69b786025a0df53f4059 364 Pfam PF00970 Oxidoreductase FAD-binding domain 52 141 5.9E-10 T 05-07-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AC028_RS04070 d49778612daa69b786025a0df53f4059 364 Pfam PF00175 Oxidoreductase NAD-binding domain 154 254 2.6E-13 T 05-07-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AC028_RS04070 d49778612daa69b786025a0df53f4059 364 Gene3D G3DSA:2.40.30.10 39 141 3.7E-15 T 05-07-2017 AC028_RS04070 d49778612daa69b786025a0df53f4059 364 PRINTS PR00406 Cytochrome B5 reductase signature 96 103 1.3E-7 T 05-07-2017 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AC028_RS04070 d49778612daa69b786025a0df53f4059 364 PRINTS PR00406 Cytochrome B5 reductase signature 75 86 1.3E-7 T 05-07-2017 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AC028_RS04070 d49778612daa69b786025a0df53f4059 364 PRINTS PR00406 Cytochrome B5 reductase signature 153 172 1.3E-7 T 05-07-2017 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AC028_RS04070 d49778612daa69b786025a0df53f4059 364 PRINTS PR00406 Cytochrome B5 reductase signature 240 248 1.3E-7 T 05-07-2017 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AC028_RS04070 d49778612daa69b786025a0df53f4059 364 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 287 335 7.3E-6 T 05-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AC028_RS04070 d49778612daa69b786025a0df53f4059 364 SUPERFAMILY SSF63380 40 145 9.24E-17 T 05-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AC028_RS15645 24d14b71263e877d87b96e1a6dc5f056 161 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 05-07-2017 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AC028_RS15645 24d14b71263e877d87b96e1a6dc5f056 161 PIRSF PIRSF000303 1 161 4.5E-64 T 05-07-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AC028_RS15645 24d14b71263e877d87b96e1a6dc5f056 161 PRINTS PR01011 Glutathione peroxidase family signature 22 39 3.9E-20 T 05-07-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AC028_RS15645 24d14b71263e877d87b96e1a6dc5f056 161 PRINTS PR01011 Glutathione peroxidase family signature 123 132 3.9E-20 T 05-07-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AC028_RS15645 24d14b71263e877d87b96e1a6dc5f056 161 PRINTS PR01011 Glutathione peroxidase family signature 57 73 3.9E-20 T 05-07-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AC028_RS15645 24d14b71263e877d87b96e1a6dc5f056 161 Gene3D G3DSA:3.40.30.10 4 160 2.1E-68 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS15645 24d14b71263e877d87b96e1a6dc5f056 161 SUPERFAMILY SSF52833 4 159 2.28E-60 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS15645 24d14b71263e877d87b96e1a6dc5f056 161 Pfam PF00255 Glutathione peroxidase 6 111 6.3E-39 T 05-07-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AC028_RS14895 976de626a535cd8e87620bbd1d54243f 609 Gene3D G3DSA:3.40.50.10490 243 446 2.0E-60 T 05-07-2017 AC028_RS14895 976de626a535cd8e87620bbd1d54243f 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 1.2E-259 T 05-07-2017 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AC028_RS14895 976de626a535cd8e87620bbd1d54243f 609 Gene3D G3DSA:3.60.20.10 2 233 6.5E-77 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS14895 976de626a535cd8e87620bbd1d54243f 609 Pfam PF13522 Glutamine amidotransferase domain 62 191 8.0E-22 T 05-07-2017 AC028_RS14895 976de626a535cd8e87620bbd1d54243f 609 Pfam PF01380 SIS domain 463 591 2.1E-25 T 05-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 AC028_RS14895 976de626a535cd8e87620bbd1d54243f 609 Pfam PF01380 SIS domain 290 416 8.1E-28 T 05-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 AC028_RS14895 976de626a535cd8e87620bbd1d54243f 609 SUPERFAMILY SSF53697 244 609 1.39E-108 T 05-07-2017 AC028_RS14895 976de626a535cd8e87620bbd1d54243f 609 SUPERFAMILY SSF56235 2 233 2.66E-71 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS14895 976de626a535cd8e87620bbd1d54243f 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 39.304 T 05-07-2017 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AC028_RS14895 976de626a535cd8e87620bbd1d54243f 609 Gene3D G3DSA:3.40.50.10490 447 609 4.5E-64 T 05-07-2017 AC028_RS14865 00b65a9a1009188c229bf5a5eaa23eb3 161 SUPERFAMILY SSF54427 28 150 2.41E-10 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS14865 00b65a9a1009188c229bf5a5eaa23eb3 161 Gene3D G3DSA:3.10.450.50 21 151 4.4E-5 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS14865 00b65a9a1009188c229bf5a5eaa23eb3 161 Pfam PF14534 Domain of unknown function (DUF4440) 34 147 1.0E-11 T 05-07-2017 IPR027843 Domain of unknown function DUF4440 AC028_RS21400 7399d116ab8639752516d0f254809d4c 158 SUPERFAMILY SSF54523 15 154 6.51E-17 T 05-07-2017 AC028_RS21400 7399d116ab8639752516d0f254809d4c 158 Gene3D G3DSA:3.30.700.10 13 53 4.2E-5 T 05-07-2017 AC028_RS21400 7399d116ab8639752516d0f254809d4c 158 Pfam PF12019 Type II transport protein GspH 51 153 2.2E-17 T 05-07-2017 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AC028_RS14510 cbdfee28be71ec39b62cc9355fe2c0dd 189 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 05-07-2017 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AC028_RS14510 cbdfee28be71ec39b62cc9355fe2c0dd 189 Pfam PF03358 NADPH-dependent FMN reductase 46 111 7.6E-9 T 05-07-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AC028_RS14510 cbdfee28be71ec39b62cc9355fe2c0dd 189 SUPERFAMILY SSF52218 1 188 9.04E-45 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS14510 cbdfee28be71ec39b62cc9355fe2c0dd 189 Gene3D G3DSA:3.40.50.360 1 189 4.6E-62 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS02885 81b141d40f0f53aa45af9abc512932ac 215 Gene3D G3DSA:3.20.19.10 1 200 1.1E-49 T 05-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AC028_RS02885 81b141d40f0f53aa45af9abc512932ac 215 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 44.293 T 05-07-2017 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AC028_RS02885 81b141d40f0f53aa45af9abc512932ac 215 Pfam PF00694 Aconitase C-terminal domain 1 132 7.6E-38 T 05-07-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS02885 81b141d40f0f53aa45af9abc512932ac 215 SUPERFAMILY SSF52016 1 201 2.16E-62 T 05-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AC028_RS02885 81b141d40f0f53aa45af9abc512932ac 215 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 1.1E-87 T 05-07-2017 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AC028_RS02470 e65f088d104ded893f914bd83e381d3b 221 PIRSF PIRSF016482 1 218 2.4E-87 T 05-07-2017 IPR007445 Pilus assembly protein, PilO AC028_RS02470 e65f088d104ded893f914bd83e381d3b 221 Pfam PF04350 Pilus assembly protein, PilO 51 201 5.0E-50 T 05-07-2017 IPR007445 Pilus assembly protein, PilO AC028_RS02470 e65f088d104ded893f914bd83e381d3b 221 Gene3D G3DSA:3.30.70.60 96 210 9.5E-35 T 05-07-2017 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AC028_RS02470 e65f088d104ded893f914bd83e381d3b 221 Gene3D G3DSA:1.10.287.540 60 95 1.8E-9 T 05-07-2017 IPR023218 UPF0291 structural domain AC028_RS01385 b31e69386364d2b762a66715817fc8ce 227 SUPERFAMILY SSF102114 42 117 1.44E-14 T 05-07-2017 AC028_RS01385 b31e69386364d2b762a66715817fc8ce 227 PIRSF PIRSF000370 16 227 1.1E-68 T 05-07-2017 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AC028_RS01385 b31e69386364d2b762a66715817fc8ce 227 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 18 227 1.6E-111 T 05-07-2017 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE AC028_RS01385 b31e69386364d2b762a66715817fc8ce 227 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 18 224 36.474 T 05-07-2017 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AC028_RS01385 b31e69386364d2b762a66715817fc8ce 227 Pfam PF04055 Radical SAM superfamily 41 118 4.5E-14 T 05-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AC028_RS01385 b31e69386364d2b762a66715817fc8ce 227 Gene3D G3DSA:3.20.20.70 44 117 8.6E-14 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS01385 b31e69386364d2b762a66715817fc8ce 227 Pfam PF13394 4Fe-4S single cluster domain 39 121 3.7E-10 T 05-07-2017 AC028_RS05680 b13dfd2f59039eafc66857a97b3a9e79 352 SUPERFAMILY SSF55073 186 337 2.98E-37 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS05680 b13dfd2f59039eafc66857a97b3a9e79 352 Gene3D G3DSA:2.60.120.10 28 148 7.4E-21 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS05680 b13dfd2f59039eafc66857a97b3a9e79 352 Pfam PF00027 Cyclic nucleotide-binding domain 43 127 7.1E-18 T 05-07-2017 IPR000595 Cyclic nucleotide-binding domain AC028_RS05680 b13dfd2f59039eafc66857a97b3a9e79 352 Gene3D G3DSA:3.30.70.270 182 338 2.5E-43 T 05-07-2017 AC028_RS05680 b13dfd2f59039eafc66857a97b3a9e79 352 SUPERFAMILY SSF51206 28 150 4.84E-22 T 05-07-2017 IPR018490 Cyclic nucleotide-binding-like AC028_RS05680 b13dfd2f59039eafc66857a97b3a9e79 352 SMART SM00267 170 338 1.3E-43 T 05-07-2017 IPR000160 GGDEF domain AC028_RS05680 b13dfd2f59039eafc66857a97b3a9e79 352 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 88 106 - T 05-07-2017 IPR018488 Cyclic nucleotide-binding, conserved site AC028_RS05680 b13dfd2f59039eafc66857a97b3a9e79 352 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 178 337 3.0E-35 T 05-07-2017 IPR000160 GGDEF domain AC028_RS05680 b13dfd2f59039eafc66857a97b3a9e79 352 Pfam PF00990 Diguanylate cyclase, GGDEF domain 182 333 8.9E-39 T 05-07-2017 IPR000160 GGDEF domain AC028_RS05680 b13dfd2f59039eafc66857a97b3a9e79 352 SMART SM00100 24 142 1.1E-15 T 05-07-2017 IPR000595 Cyclic nucleotide-binding domain AC028_RS17250 68873d4bf00a73216f3cde75dd12fe2a 554 Hamap MF_01227 CTP synthase [pyrG]. 2 543 50.963 T 05-07-2017 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AC028_RS17250 68873d4bf00a73216f3cde75dd12fe2a 554 Pfam PF06418 CTP synthase N-terminus 5 265 2.6E-121 T 05-07-2017 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AC028_RS17250 68873d4bf00a73216f3cde75dd12fe2a 554 Gene3D G3DSA:3.40.50.300 4 285 2.4E-126 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS17250 68873d4bf00a73216f3cde75dd12fe2a 554 SUPERFAMILY SSF52317 290 542 8.58E-80 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS17250 68873d4bf00a73216f3cde75dd12fe2a 554 TIGRFAM TIGR00337 PyrG: CTP synthase 4 538 2.2E-238 T 05-07-2017 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AC028_RS17250 68873d4bf00a73216f3cde75dd12fe2a 554 SUPERFAMILY SSF52540 2 266 7.31E-118 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS17250 68873d4bf00a73216f3cde75dd12fe2a 554 Gene3D G3DSA:3.40.50.880 290 543 1.9E-88 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS17250 68873d4bf00a73216f3cde75dd12fe2a 554 Pfam PF00117 Glutamine amidotransferase class-I 303 537 4.3E-54 T 05-07-2017 IPR017926 Glutamine amidotransferase AC028_RS10355 bf6b4a8bf27e849575713c9b2467a8d4 340 Pfam PF00753 Metallo-beta-lactamase superfamily 101 310 3.8E-16 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS10355 bf6b4a8bf27e849575713c9b2467a8d4 340 SMART SM00849 102 310 1.6E-19 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS10355 bf6b4a8bf27e849575713c9b2467a8d4 340 Gene3D G3DSA:3.60.15.10 44 331 1.1E-52 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS10355 bf6b4a8bf27e849575713c9b2467a8d4 340 SUPERFAMILY SSF56281 43 331 5.11E-48 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS15440 9dcd35d7539868839abf9bf5cf7683cb 275 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 231 257 - T 05-07-2017 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981 AC028_RS15440 9dcd35d7539868839abf9bf5cf7683cb 275 Pfam PF01148 Cytidylyltransferase family 3 269 2.0E-68 T 05-07-2017 AC028_RS10595 df9378e000b461c3059d69f937406f8f 337 Gene3D G3DSA:1.10.150.170 112 214 2.2E-36 T 05-07-2017 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AC028_RS10595 df9378e000b461c3059d69f937406f8f 337 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 6 305 2.2E-99 T 05-07-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AC028_RS10595 df9378e000b461c3059d69f937406f8f 337 Pfam PF01795 MraW methylase family 7 305 1.7E-99 T 05-07-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AC028_RS10595 df9378e000b461c3059d69f937406f8f 337 PIRSF PIRSF004486 2 307 1.6E-97 T 05-07-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AC028_RS10595 df9378e000b461c3059d69f937406f8f 337 SUPERFAMILY SSF81799 113 212 3.01E-34 T 05-07-2017 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AC028_RS10595 df9378e000b461c3059d69f937406f8f 337 Gene3D G3DSA:3.40.50.150 8 109 3.4E-49 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS10595 df9378e000b461c3059d69f937406f8f 337 Gene3D G3DSA:3.40.50.150 215 306 3.4E-49 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS10595 df9378e000b461c3059d69f937406f8f 337 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 8 306 37.298 T 05-07-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AC028_RS10595 df9378e000b461c3059d69f937406f8f 337 SUPERFAMILY SSF53335 212 306 9.49E-43 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS10595 df9378e000b461c3059d69f937406f8f 337 SUPERFAMILY SSF53335 8 112 9.49E-43 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS06285 5649b8fe188000a0da4543283edcb3d4 286 Pfam PF09339 IclR helix-turn-helix domain 44 92 3.4E-12 T 05-07-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AC028_RS06285 5649b8fe188000a0da4543283edcb3d4 286 Gene3D G3DSA:1.10.10.10 29 100 3.5E-26 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS06285 5649b8fe188000a0da4543283edcb3d4 286 SUPERFAMILY SSF55781 111 285 2.4E-49 T 05-07-2017 IPR029016 GAF domain-like AC028_RS06285 5649b8fe188000a0da4543283edcb3d4 286 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 39 284 2.7E-94 T 05-07-2017 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 AC028_RS06285 5649b8fe188000a0da4543283edcb3d4 286 Pfam PF01614 Bacterial transcriptional regulator 158 281 1.5E-36 T 05-07-2017 IPR014757 Transcription regulator IclR, C-terminal AC028_RS06285 5649b8fe188000a0da4543283edcb3d4 286 SMART SM00346 42 130 1.4E-18 T 05-07-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AC028_RS06285 5649b8fe188000a0da4543283edcb3d4 286 Gene3D G3DSA:3.30.450.40 109 285 2.4E-56 T 05-07-2017 IPR029016 GAF domain-like AC028_RS06285 5649b8fe188000a0da4543283edcb3d4 286 SUPERFAMILY SSF46785 43 112 1.95E-10 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS11685 bdc6ff9c112b137ea417084d4c0ce2e4 89 Gene3D G3DSA:2.40.50.140 11 86 4.2E-33 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS11685 bdc6ff9c112b137ea417084d4c0ce2e4 89 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 11 81 1.6E-34 T 05-07-2017 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11685 bdc6ff9c112b137ea417084d4c0ce2e4 89 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 11 81 9.0E-36 T 05-07-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11685 bdc6ff9c112b137ea417084d4c0ce2e4 89 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 86 24.095 T 05-07-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11685 bdc6ff9c112b137ea417084d4c0ce2e4 89 SUPERFAMILY SSF50249 11 86 4.2E-31 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS11685 bdc6ff9c112b137ea417084d4c0ce2e4 89 PRINTS PR00973 Ribosomal protein S17 family signature 61 71 5.4E-11 T 05-07-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11685 bdc6ff9c112b137ea417084d4c0ce2e4 89 PRINTS PR00973 Ribosomal protein S17 family signature 29 52 5.4E-11 T 05-07-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11685 bdc6ff9c112b137ea417084d4c0ce2e4 89 PRINTS PR00973 Ribosomal protein S17 family signature 71 78 5.4E-11 T 05-07-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11685 bdc6ff9c112b137ea417084d4c0ce2e4 89 Pfam PF00366 Ribosomal protein S17 15 82 7.8E-32 T 05-07-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS14750 76aeeb462681fc2d65626a7a6f86a990 228 Gene3D G3DSA:2.40.160.20 49 228 1.1E-44 T 05-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AC028_RS14750 76aeeb462681fc2d65626a7a6f86a990 228 SUPERFAMILY SSF56925 56 228 1.18E-18 T 05-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AC028_RS14750 76aeeb462681fc2d65626a7a6f86a990 228 Pfam PF03922 OmpW family 70 228 3.0E-38 T 05-07-2017 IPR005618 Outer membrane protein, OmpW GO:0019867 AC028_RS22415 20914849c6c6e536f79c69abdd3563a8 224 SUPERFAMILY SSF54427 86 223 3.77E-31 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS22415 20914849c6c6e536f79c69abdd3563a8 224 Pfam PF04335 VirB8 protein 25 220 3.6E-26 T 05-07-2017 IPR007430 Bacterial virulence protein VirB8 GO:0016020 AC028_RS14970 f8e327275e76615b2e869e76f82f70c9 216 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 7 215 1.3E-65 T 05-07-2017 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AC028_RS14970 f8e327275e76615b2e869e76f82f70c9 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 185 8.3E-12 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS14970 f8e327275e76615b2e869e76f82f70c9 216 Gene3D G3DSA:3.40.50.1000 84 214 5.9E-45 T 05-07-2017 IPR023214 HAD-like domain AC028_RS14970 f8e327275e76615b2e869e76f82f70c9 216 Gene3D G3DSA:3.40.50.1000 3 20 5.9E-45 T 05-07-2017 IPR023214 HAD-like domain AC028_RS14970 f8e327275e76615b2e869e76f82f70c9 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 187 1.1E-37 T 05-07-2017 IPR023214 HAD-like domain AC028_RS14970 f8e327275e76615b2e869e76f82f70c9 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 176 189 9.9E-9 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS14970 f8e327275e76615b2e869e76f82f70c9 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 9.9E-9 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS14970 f8e327275e76615b2e869e76f82f70c9 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 9.9E-9 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS14970 f8e327275e76615b2e869e76f82f70c9 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 9.9E-9 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS14970 f8e327275e76615b2e869e76f82f70c9 216 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 101 181 1.3E-8 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS14970 f8e327275e76615b2e869e76f82f70c9 216 SUPERFAMILY SSF56784 4 215 2.33E-60 T 05-07-2017 IPR023214 HAD-like domain AC028_RS14970 f8e327275e76615b2e869e76f82f70c9 216 Gene3D G3DSA:1.10.150.240 21 83 1.6E-16 T 05-07-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 AC028_RS11580 63fb6fbc59890ea3555f0756053e65ab 185 Pfam PF00467 KOW motif 134 168 2.8E-7 T 05-07-2017 IPR005824 KOW AC028_RS11580 63fb6fbc59890ea3555f0756053e65ab 185 Gene3D G3DSA:2.30.30.30 124 184 4.9E-30 T 05-07-2017 IPR014722 Ribosomal protein L2 domain 2 AC028_RS11580 63fb6fbc59890ea3555f0756053e65ab 185 Gene3D G3DSA:3.30.70.940 2 121 6.7E-40 T 05-07-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AC028_RS11580 63fb6fbc59890ea3555f0756053e65ab 185 SMART SM00738 1 119 1.1E-42 T 05-07-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AC028_RS11580 63fb6fbc59890ea3555f0756053e65ab 185 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 4 184 6.0E-61 T 05-07-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 AC028_RS11580 63fb6fbc59890ea3555f0756053e65ab 185 SMART SM00739 131 158 2.6E-5 T 05-07-2017 IPR005824 KOW AC028_RS11580 63fb6fbc59890ea3555f0756053e65ab 185 SUPERFAMILY SSF82679 2 121 1.96E-35 T 05-07-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AC028_RS11580 63fb6fbc59890ea3555f0756053e65ab 185 PRINTS PR00338 Transcription termination factor NUSG signature 161 177 8.3E-19 T 05-07-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 AC028_RS11580 63fb6fbc59890ea3555f0756053e65ab 185 PRINTS PR00338 Transcription termination factor NUSG signature 56 68 8.3E-19 T 05-07-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 AC028_RS11580 63fb6fbc59890ea3555f0756053e65ab 185 PRINTS PR00338 Transcription termination factor NUSG signature 143 158 8.3E-19 T 05-07-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 AC028_RS11580 63fb6fbc59890ea3555f0756053e65ab 185 SUPERFAMILY SSF50104 129 184 2.66E-18 T 05-07-2017 IPR008991 Translation protein SH3-like domain AC028_RS11580 63fb6fbc59890ea3555f0756053e65ab 185 Pfam PF02357 Transcription termination factor nusG 2 116 2.0E-22 T 05-07-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AC028_RS11580 63fb6fbc59890ea3555f0756053e65ab 185 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 185 22.929 T 05-07-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 AC028_RS11580 63fb6fbc59890ea3555f0756053e65ab 185 ProSitePatterns PS01014 Transcription termination factor nusG signature. 168 177 - T 05-07-2017 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 Pfam PF08447 PAS fold 470 551 4.2E-12 T 05-07-2017 IPR013655 PAS fold-3 GO:0005515 AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 Pfam PF00990 Diguanylate cyclase, GGDEF domain 694 849 8.4E-40 T 05-07-2017 IPR000160 GGDEF domain AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 692 849 1.0E-35 T 05-07-2017 IPR000160 GGDEF domain AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 SUPERFAMILY SSF55785 165 294 1.2E-12 T 05-07-2017 IPR000014 PAS domain AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 SMART SM00086 254 296 6.6 T 05-07-2017 IPR001610 PAC motif AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 SMART SM00086 518 560 1.1E-7 T 05-07-2017 IPR001610 PAC motif AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 SMART SM00086 391 433 0.0053 T 05-07-2017 IPR001610 PAC motif AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 SUPERFAMILY SSF55785 451 561 1.57E-23 T 05-07-2017 IPR000014 PAS domain AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 Gene3D G3DSA:3.30.450.20 294 431 3.1E-24 T 05-07-2017 AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 Gene3D G3DSA:3.30.450.20 173 293 8.4E-13 T 05-07-2017 AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 SUPERFAMILY SSF55073 699 849 8.63E-41 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 Gene3D G3DSA:3.30.70.270 696 849 1.9E-46 T 05-07-2017 AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 SUPERFAMILY SSF55785 557 681 5.11E-20 T 05-07-2017 IPR000014 PAS domain AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 SMART SM00267 683 856 2.6E-44 T 05-07-2017 IPR000160 GGDEF domain AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 445 567 9.6E-25 T 05-07-2017 IPR000014 PAS domain AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 568 687 5.0E-8 T 05-07-2017 IPR000014 PAS domain AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 307 439 5.6E-13 T 05-07-2017 IPR000014 PAS domain AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 SUPERFAMILY SSF55781 33 167 8.67E-25 T 05-07-2017 IPR029016 GAF domain-like AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 Pfam PF08448 PAS fold 182 297 2.3E-7 T 05-07-2017 IPR013656 PAS fold-4 AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 Pfam PF08448 PAS fold 579 683 8.4E-14 T 05-07-2017 IPR013656 PAS fold-4 AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 Pfam PF08448 PAS fold 316 433 2.1E-7 T 05-07-2017 IPR013656 PAS fold-4 AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 Gene3D G3DSA:3.30.450.20 445 576 1.2E-26 T 05-07-2017 AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 SMART SM00091 445 511 3.8E-13 T 05-07-2017 IPR000014 PAS domain AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 SMART SM00091 572 638 0.0018 T 05-07-2017 IPR000014 PAS domain AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 SMART SM00091 308 375 3.3E-6 T 05-07-2017 IPR000014 PAS domain AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 SMART SM00091 176 246 15.0 T 05-07-2017 IPR000014 PAS domain AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 SUPERFAMILY SSF55785 293 431 2.36E-19 T 05-07-2017 IPR000014 PAS domain AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 Gene3D G3DSA:3.30.450.40 33 172 5.4E-13 T 05-07-2017 IPR029016 GAF domain-like AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 Gene3D G3DSA:3.30.450.20 577 682 6.0E-18 T 05-07-2017 AC028_RS09755 d40f9e09cafb80f7d77e61d07f5fbc32 858 Pfam PF01590 GAF domain 40 158 6.8E-7 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS21680 f04fea05451135554b820799784282fe 449 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 443 2.8E-11 T 05-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS21680 f04fea05451135554b820799784282fe 449 Gene3D G3DSA:3.30.310.50 371 447 6.5E-14 T 05-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS21680 f04fea05451135554b820799784282fe 449 SUPERFAMILY SSF53738 158 258 1.92E-27 T 05-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS21680 f04fea05451135554b820799784282fe 449 Gene3D G3DSA:3.40.120.10 178 251 2.3E-24 T 05-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS21680 f04fea05451135554b820799784282fe 449 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 446 1.2E-191 T 05-07-2017 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS21680 f04fea05451135554b820799784282fe 449 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 367 8.1E-28 T 05-07-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS21680 f04fea05451135554b820799784282fe 449 SUPERFAMILY SSF53738 3 167 8.63E-47 T 05-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS21680 f04fea05451135554b820799784282fe 449 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 05-07-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS21680 f04fea05451135554b820799784282fe 449 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 137 5.1E-43 T 05-07-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS21680 f04fea05451135554b820799784282fe 449 SUPERFAMILY SSF55957 360 448 1.26E-16 T 05-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS21680 f04fea05451135554b820799784282fe 449 Gene3D G3DSA:3.40.120.10 253 370 3.9E-30 T 05-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS21680 f04fea05451135554b820799784282fe 449 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 256 1.6E-17 T 05-07-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS21680 f04fea05451135554b820799784282fe 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 5.6E-12 T 05-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS21680 f04fea05451135554b820799784282fe 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 5.6E-12 T 05-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS21680 f04fea05451135554b820799784282fe 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 5.6E-12 T 05-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS21680 f04fea05451135554b820799784282fe 449 SUPERFAMILY SSF53738 260 366 2.79E-27 T 05-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS21680 f04fea05451135554b820799784282fe 449 Gene3D G3DSA:3.40.120.10 4 153 2.0E-47 T 05-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS21680 f04fea05451135554b820799784282fe 449 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 448 44.761 T 05-07-2017 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS17630 3558d928b84ee0066eefc85472b4b980 114 Gene3D G3DSA:3.40.1620.10 27 58 1.8E-8 T 05-07-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AC028_RS17630 3558d928b84ee0066eefc85472b4b980 114 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 26 61 6.6E-9 T 05-07-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AC028_RS17630 3558d928b84ee0066eefc85472b4b980 114 SUPERFAMILY SSF143120 23 71 5.23E-9 T 05-07-2017 AC028_RS17630 3558d928b84ee0066eefc85472b4b980 114 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 25 74 4.1E-9 T 05-07-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AC028_RS08275 973426a15d3669f890543410b7390ca0 445 SMART SM00195 301 425 0.0024 T 05-07-2017 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 AC028_RS08275 973426a15d3669f890543410b7390ca0 445 SUPERFAMILY SSF52799 284 419 2.99E-16 T 05-07-2017 IPR029021 Protein-tyrosine phosphatase-like AC028_RS08275 973426a15d3669f890543410b7390ca0 445 Gene3D G3DSA:3.90.190.10 297 417 1.9E-12 T 05-07-2017 IPR029021 Protein-tyrosine phosphatase-like AC028_RS08275 973426a15d3669f890543410b7390ca0 445 Pfam PF00782 Dual specificity phosphatase, catalytic domain 358 422 2.3E-8 T 05-07-2017 IPR000340 Dual specificity phosphatase, catalytic domain GO:0006470|GO:0008138 AC028_RS08275 973426a15d3669f890543410b7390ca0 445 Pfam PF14378 PAP2 superfamily 66 194 9.9E-7 T 05-07-2017 IPR026841 Inositolphosphotransferase Aur1/Ipt1 AC028_RS05730 17db444f723b02df8d722b6dd2388fd1 206 Gene3D G3DSA:1.10.357.10 7 202 4.5E-39 T 05-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AC028_RS05730 17db444f723b02df8d722b6dd2388fd1 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 2.2E-16 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS05730 17db444f723b02df8d722b6dd2388fd1 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 9.3E-11 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS05730 17db444f723b02df8d722b6dd2388fd1 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 9.3E-11 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS05730 17db444f723b02df8d722b6dd2388fd1 206 SUPERFAMILY SSF46689 10 92 2.17E-19 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS05730 17db444f723b02df8d722b6dd2388fd1 206 SUPERFAMILY SSF48498 87 200 1.84E-11 T 05-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AC028_RS02860 fb42dfb5ce59455d94f99b6eb4b042ee 573 Gene3D G3DSA:3.40.50.970 10 176 5.2E-74 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS02860 fb42dfb5ce59455d94f99b6eb4b042ee 573 Gene3D G3DSA:3.40.50.1220 190 356 3.2E-54 T 05-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AC028_RS02860 fb42dfb5ce59455d94f99b6eb4b042ee 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 332 1.2E-42 T 05-07-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AC028_RS02860 fb42dfb5ce59455d94f99b6eb4b042ee 573 SUPERFAMILY SSF52518 368 559 1.75E-66 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS02860 fb42dfb5ce59455d94f99b6eb4b042ee 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 174 3.5E-58 T 05-07-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AC028_RS02860 fb42dfb5ce59455d94f99b6eb4b042ee 573 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 11 558 1.4E-205 T 05-07-2017 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AC028_RS02860 fb42dfb5ce59455d94f99b6eb4b042ee 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 386 534 3.6E-48 T 05-07-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AC028_RS02860 fb42dfb5ce59455d94f99b6eb4b042ee 573 SUPERFAMILY SSF52518 10 190 1.22E-61 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS02860 fb42dfb5ce59455d94f99b6eb4b042ee 573 Gene3D G3DSA:3.40.50.970 357 565 4.7E-72 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS02860 fb42dfb5ce59455d94f99b6eb4b042ee 573 SUPERFAMILY SSF52467 195 353 2.18E-53 T 05-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AC028_RS02860 fb42dfb5ce59455d94f99b6eb4b042ee 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 423 442 - T 05-07-2017 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AC028_RS15625 c403c22d2f49371d004657b401733081 281 Gene3D G3DSA:3.90.640.20 241 276 6.6E-4 T 05-07-2017 IPR021729 Domain of unknown function DUF3298 AC028_RS15625 c403c22d2f49371d004657b401733081 281 Pfam PF13739 Domain of unknown function (DUF4163) 66 145 3.7E-6 T 05-07-2017 IPR025303 Domain of unknown function DUF4163 AC028_RS15625 c403c22d2f49371d004657b401733081 281 Gene3D G3DSA:3.30.565.40 84 162 3.9E-8 T 05-07-2017 IPR025303 Domain of unknown function DUF4163 AC028_RS00950 e657b03b62220b53620364bc571abff8 824 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 364 509 5.5E-17 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS00950 e657b03b62220b53620364bc571abff8 824 Gene3D G3DSA:2.40.110.10 241 350 7.4E-14 T 05-07-2017 AC028_RS00950 e657b03b62220b53620364bc571abff8 824 SUPERFAMILY SSF56645 123 359 1.31E-41 T 05-07-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AC028_RS00950 e657b03b62220b53620364bc571abff8 824 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 141 236 6.1E-17 T 05-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AC028_RS00950 e657b03b62220b53620364bc571abff8 824 Gene3D G3DSA:1.10.540.10 101 236 3.7E-31 T 05-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AC028_RS00950 e657b03b62220b53620364bc571abff8 824 Pfam PF09317 Domain of unknown function (DUF1974) 518 801 1.4E-108 T 05-07-2017 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 AC028_RS00950 e657b03b62220b53620364bc571abff8 824 SUPERFAMILY SSF47203 364 510 1.4E-25 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS00950 e657b03b62220b53620364bc571abff8 824 Gene3D G3DSA:1.20.140.10 351 511 3.0E-28 T 05-07-2017 AC028_RS20650 ade2dd05d40a63ff0d011a8bd1bc76da 371 PIRSF PIRSF019574 1 371 1.5E-136 T 05-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AC028_RS20650 ade2dd05d40a63ff0d011a8bd1bc76da 371 SUPERFAMILY SSF53850 32 370 4.18E-99 T 05-07-2017 AC028_RS20650 ade2dd05d40a63ff0d011a8bd1bc76da 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 80 94 2.4E-55 T 05-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AC028_RS20650 ade2dd05d40a63ff0d011a8bd1bc76da 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 183 202 2.4E-55 T 05-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AC028_RS20650 ade2dd05d40a63ff0d011a8bd1bc76da 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 220 239 2.4E-55 T 05-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AC028_RS20650 ade2dd05d40a63ff0d011a8bd1bc76da 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 37 53 2.4E-55 T 05-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AC028_RS20650 ade2dd05d40a63ff0d011a8bd1bc76da 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 160 174 2.4E-55 T 05-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AC028_RS20650 ade2dd05d40a63ff0d011a8bd1bc76da 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 315 341 2.4E-55 T 05-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AC028_RS20650 ade2dd05d40a63ff0d011a8bd1bc76da 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 53 74 2.4E-55 T 05-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AC028_RS20650 ade2dd05d40a63ff0d011a8bd1bc76da 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 96 109 2.4E-55 T 05-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AC028_RS20650 ade2dd05d40a63ff0d011a8bd1bc76da 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 270 289 2.4E-55 T 05-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AC028_RS20650 ade2dd05d40a63ff0d011a8bd1bc76da 371 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 129 145 2.4E-55 T 05-07-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AC028_RS20650 ade2dd05d40a63ff0d011a8bd1bc76da 371 Gene3D G3DSA:3.40.190.10 43 152 3.1E-14 T 05-07-2017 AC028_RS20650 ade2dd05d40a63ff0d011a8bd1bc76da 371 Pfam PF13416 Bacterial extracellular solute-binding protein 48 328 4.2E-37 T 05-07-2017 AC028_RS20650 ade2dd05d40a63ff0d011a8bd1bc76da 371 Gene3D G3DSA:3.40.190.10 153 319 3.8E-71 T 05-07-2017 AC028_RS19275 113d32af85398f5b12636fb70ab35b74 215 SMART SM00421 146 203 1.9E-17 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS19275 113d32af85398f5b12636fb70ab35b74 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 203 4.8E-16 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS19275 113d32af85398f5b12636fb70ab35b74 215 SUPERFAMILY SSF46894 144 210 4.76E-18 T 05-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AC028_RS19275 113d32af85398f5b12636fb70ab35b74 215 SUPERFAMILY SSF52172 2 132 1.1E-29 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS19275 113d32af85398f5b12636fb70ab35b74 215 Pfam PF00072 Response regulator receiver domain 5 116 8.6E-25 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS19275 113d32af85398f5b12636fb70ab35b74 215 SMART SM00448 3 116 1.2E-26 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS19275 113d32af85398f5b12636fb70ab35b74 215 Gene3D G3DSA:1.10.10.10 121 210 3.3E-22 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS19275 113d32af85398f5b12636fb70ab35b74 215 Gene3D G3DSA:3.40.50.2300 2 120 4.3E-30 T 05-07-2017 AC028_RS19275 113d32af85398f5b12636fb70ab35b74 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 4.4E-11 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS19275 113d32af85398f5b12636fb70ab35b74 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 4.4E-11 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS19275 113d32af85398f5b12636fb70ab35b74 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 4.4E-11 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS00785 eb438f1e15dec39df92cf42ac0dc521a 370 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 8 370 39.416 T 05-07-2017 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AC028_RS00785 eb438f1e15dec39df92cf42ac0dc521a 370 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 18 366 3.6E-108 T 05-07-2017 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AC028_RS00785 eb438f1e15dec39df92cf42ac0dc521a 370 Pfam PF01761 3-dehydroquinate synthase 74 337 1.4E-102 T 05-07-2017 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AC028_RS00785 eb438f1e15dec39df92cf42ac0dc521a 370 SUPERFAMILY SSF56796 15 368 5.5E-103 T 05-07-2017 AC028_RS00785 eb438f1e15dec39df92cf42ac0dc521a 370 PIRSF PIRSF001455 21 369 1.6E-102 T 05-07-2017 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AC028_RS00785 eb438f1e15dec39df92cf42ac0dc521a 370 Gene3D G3DSA:3.40.50.1970 15 179 5.5E-59 T 05-07-2017 AC028_RS00785 eb438f1e15dec39df92cf42ac0dc521a 370 Gene3D G3DSA:1.20.1090.10 180 368 8.8E-63 T 05-07-2017 AC028_RS12395 42d27229d0c466259321d60d2d885639 273 SUPERFAMILY SSF51695 2 267 6.28E-44 T 05-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AC028_RS12395 42d27229d0c466259321d60d2d885639 273 Gene3D G3DSA:3.20.20.190 2 267 2.3E-45 T 05-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AC028_RS12395 42d27229d0c466259321d60d2d885639 273 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 5 124 1.8E-21 T 05-07-2017 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AC028_RS12395 42d27229d0c466259321d60d2d885639 273 Pfam PF16387 Domain of unknown function 171 266 2.3E-15 T 05-07-2017 IPR032160 Domain of unknown function DUF4996 AC028_RS02830 5a37e7712403ad172adc6cdfc8b5be9c 625 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 138 592 56.364 T 05-07-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AC028_RS02830 5a37e7712403ad172adc6cdfc8b5be9c 625 Pfam PF01964 Radical SAM ThiC family 139 586 4.1E-200 T 05-07-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AC028_RS02830 5a37e7712403ad172adc6cdfc8b5be9c 625 Pfam PF13667 ThiC-associated domain 22 98 1.0E-29 T 05-07-2017 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AC028_RS02830 5a37e7712403ad172adc6cdfc8b5be9c 625 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 138 590 3.4E-215 T 05-07-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AC028_RS04545 4572ec1cebabc526b452d8b3e0b68e09 337 Pfam PF13621 Cupin-like domain 23 260 1.2E-55 T 05-07-2017 AC028_RS04545 4572ec1cebabc526b452d8b3e0b68e09 337 SUPERFAMILY SSF51197 8 320 7.42E-56 T 05-07-2017 AC028_RS04545 4572ec1cebabc526b452d8b3e0b68e09 337 Gene3D G3DSA:2.60.120.650 12 258 5.3E-40 T 05-07-2017 AC028_RS04545 4572ec1cebabc526b452d8b3e0b68e09 337 SMART SM00558 100 272 3.6E-5 T 05-07-2017 IPR003347 JmjC domain AC028_RS01420 06f8d0e1d5be62799c1443b0e69e61a2 152 Pfam PF03061 Thioesterase superfamily 30 114 1.4E-17 T 05-07-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 AC028_RS01420 06f8d0e1d5be62799c1443b0e69e61a2 152 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 19 122 1.7E-31 T 05-07-2017 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AC028_RS01420 06f8d0e1d5be62799c1443b0e69e61a2 152 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 16 138 1.0E-50 T 05-07-2017 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 AC028_RS01420 06f8d0e1d5be62799c1443b0e69e61a2 152 Gene3D G3DSA:3.10.129.10 14 144 1.7E-44 T 05-07-2017 IPR029069 HotDog domain AC028_RS01420 06f8d0e1d5be62799c1443b0e69e61a2 152 PIRSF PIRSF003230 8 149 1.5E-40 T 05-07-2017 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AC028_RS01420 06f8d0e1d5be62799c1443b0e69e61a2 152 SUPERFAMILY SSF54637 14 144 1.41E-38 T 05-07-2017 IPR029069 HotDog domain AC028_RS01420 06f8d0e1d5be62799c1443b0e69e61a2 152 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 21 38 - T 05-07-2017 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 AC028_RS14540 c53f7382410a0397be99692043227e39 150 SMART SM00554 40 150 2.8E-24 T 05-07-2017 IPR000782 FAS1 domain AC028_RS14540 c53f7382410a0397be99692043227e39 150 SUPERFAMILY SSF82153 5 150 6.67E-42 T 05-07-2017 IPR000782 FAS1 domain AC028_RS14540 c53f7382410a0397be99692043227e39 150 Pfam PF02469 Fasciclin domain 16 150 4.0E-34 T 05-07-2017 IPR000782 FAS1 domain AC028_RS14540 c53f7382410a0397be99692043227e39 150 Gene3D G3DSA:2.30.180.10 5 150 1.9E-39 T 05-07-2017 IPR000782 FAS1 domain AC028_RS14920 7ca80e91ec19936e9ccd8b32cd5d7ec1 174 ProSitePatterns PS00934 Glyoxalase I signature 1. 26 47 - T 05-07-2017 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AC028_RS14920 7ca80e91ec19936e9ccd8b32cd5d7ec1 174 Gene3D G3DSA:3.10.180.10 13 172 2.2E-56 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS14920 7ca80e91ec19936e9ccd8b32cd5d7ec1 174 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 24 167 3.0E-22 T 05-07-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AC028_RS14920 7ca80e91ec19936e9ccd8b32cd5d7ec1 174 SUPERFAMILY SSF54593 21 172 2.15E-32 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS14920 7ca80e91ec19936e9ccd8b32cd5d7ec1 174 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 16 171 1.0E-42 T 05-07-2017 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AC028_RS05845 ce32ab144153e8eeeb7faa114c248f72 323 Gene3D G3DSA:3.20.20.100 4 315 5.5E-92 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS05845 ce32ab144153e8eeeb7faa114c248f72 323 SUPERFAMILY SSF51430 4 315 6.29E-92 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS05845 ce32ab144153e8eeeb7faa114c248f72 323 Pfam PF00248 Aldo/keto reductase family 16 314 4.3E-68 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS11935 17d881bf1dfcf51f8cfdebe0251dfaa7 432 SUPERFAMILY SSF53623 6 293 1.72E-84 T 05-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AC028_RS11935 17d881bf1dfcf51f8cfdebe0251dfaa7 432 Pfam PF02875 Mur ligase family, glutamate ligase domain 294 346 2.0E-5 T 05-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AC028_RS11935 17d881bf1dfcf51f8cfdebe0251dfaa7 432 SUPERFAMILY SSF53244 296 426 4.73E-26 T 05-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AC028_RS11935 17d881bf1dfcf51f8cfdebe0251dfaa7 432 PIRSF PIRSF001563 1 432 8.9E-101 T 05-07-2017 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AC028_RS11935 17d881bf1dfcf51f8cfdebe0251dfaa7 432 Gene3D G3DSA:3.90.190.20 296 430 8.8E-33 T 05-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AC028_RS11935 17d881bf1dfcf51f8cfdebe0251dfaa7 432 TIGRFAM TIGR01499 folC: bifunctional protein FolC 26 425 2.7E-94 T 05-07-2017 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AC028_RS11935 17d881bf1dfcf51f8cfdebe0251dfaa7 432 Gene3D G3DSA:3.40.1190.10 7 294 2.4E-88 T 05-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AC028_RS11935 17d881bf1dfcf51f8cfdebe0251dfaa7 432 Pfam PF08245 Mur ligase middle domain 48 272 2.5E-10 T 05-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AC028_RS00335 6d3b0845ddd9d6c77dabe049990aae4b 179 Gene3D G3DSA:3.40.630.30 2 155 7.8E-28 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS00335 6d3b0845ddd9d6c77dabe049990aae4b 179 Pfam PF13673 Acetyltransferase (GNAT) domain 45 145 4.1E-14 T 05-07-2017 IPR000182 GNAT domain GO:0008080 AC028_RS00335 6d3b0845ddd9d6c77dabe049990aae4b 179 SUPERFAMILY SSF55729 1 155 2.23E-28 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 Hamap MF_00098 Methionine--tRNA ligase [metG]. 3 545 38.51 T 05-07-2017 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 05-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 8.5E-25 T 05-07-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 289 304 8.5E-25 T 05-07-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 8.5E-25 T 05-07-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 8.5E-25 T 05-07-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 383 394 8.5E-25 T 05-07-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 PRINTS PR01041 Methionyl-tRNA synthetase signature 250 261 8.5E-25 T 05-07-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 SUPERFAMILY SSF50249 584 690 7.1E-28 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 Pfam PF01588 Putative tRNA binding domain 594 688 2.9E-20 T 05-07-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 535 1.3E-157 T 05-07-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 SUPERFAMILY SSF47323 388 546 2.01E-39 T 05-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 563 690 2.3E-37 T 05-07-2017 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 SUPERFAMILY SSF57770 139 173 1.14E-11 T 05-07-2017 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 Gene3D G3DSA:1.10.730.10 380 534 4.3E-38 T 05-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 Gene3D G3DSA:2.40.50.140 584 690 1.9E-37 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 Gene3D G3DSA:2.20.28.20 142 173 1.4E-17 T 05-07-2017 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 Gene3D G3DSA:3.40.50.620 5 141 1.2E-75 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 Gene3D G3DSA:3.40.50.620 180 379 1.2E-75 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 Pfam PF09334 tRNA synthetases class I (M) 6 395 8.2E-149 T 05-07-2017 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 SUPERFAMILY SSF52374 173 385 1.35E-87 T 05-07-2017 AC028_RS03610 d7ef53f11db0c332ff90e29cad12228d 691 SUPERFAMILY SSF52374 4 138 1.35E-87 T 05-07-2017 AC028_RS17310 9da6b9b974235717d7666b5b326aef22 265 Gene3D G3DSA:3.10.350.10 67 110 1.5E-17 T 05-07-2017 IPR018392 LysM domain AC028_RS17310 9da6b9b974235717d7666b5b326aef22 265 SUPERFAMILY SSF51261 66 262 1.26E-44 T 05-07-2017 IPR011055 Duplicated hybrid motif AC028_RS17310 9da6b9b974235717d7666b5b326aef22 265 Pfam PF01476 LysM domain 67 107 1.4E-13 T 05-07-2017 IPR018392 LysM domain AC028_RS17310 9da6b9b974235717d7666b5b326aef22 265 Gene3D G3DSA:2.70.70.10 140 264 6.0E-37 T 05-07-2017 AC028_RS17310 9da6b9b974235717d7666b5b326aef22 265 SMART SM00257 65 109 8.2E-16 T 05-07-2017 IPR018392 LysM domain AC028_RS17310 9da6b9b974235717d7666b5b326aef22 265 Pfam PF01551 Peptidase family M23 164 258 1.8E-28 T 05-07-2017 IPR016047 Peptidase M23 AC028_RS09615 49a23d2ad793110be2b3673c6af74c48 202 SUPERFAMILY SSF54001 19 198 1.18E-32 T 05-07-2017 AC028_RS09615 49a23d2ad793110be2b3673c6af74c48 202 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 19 198 6.1E-36 T 05-07-2017 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AC028_RS09615 49a23d2ad793110be2b3673c6af74c48 202 Gene3D G3DSA:2.30.30.330 18 200 1.1E-39 T 05-07-2017 AC028_RS19800 6170eaff094096bf7d77e008f4bb7937 294 SUPERFAMILY SSF161098 55 281 1.7E-61 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS19800 6170eaff094096bf7d77e008f4bb7937 294 Gene3D G3DSA:1.10.3720.10 61 291 1.2E-64 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS19800 6170eaff094096bf7d77e008f4bb7937 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 287 3.2E-18 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS21935 c899e03ca9a97bb00a46ee3475061571 433 Pfam PF09179 TilS substrate binding domain 242 308 2.6E-10 T 05-07-2017 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AC028_RS21935 c899e03ca9a97bb00a46ee3475061571 433 Pfam PF11734 TilS substrate C-terminal domain 355 426 9.2E-17 T 05-07-2017 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AC028_RS21935 c899e03ca9a97bb00a46ee3475061571 433 Gene3D G3DSA:3.40.50.620 14 174 3.1E-12 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS21935 c899e03ca9a97bb00a46ee3475061571 433 SUPERFAMILY SSF52402 12 222 1.54E-60 T 05-07-2017 AC028_RS21935 c899e03ca9a97bb00a46ee3475061571 433 SUPERFAMILY SSF56037 317 427 1.23E-21 T 05-07-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 AC028_RS21935 c899e03ca9a97bb00a46ee3475061571 433 SMART SM00977 353 426 2.7E-18 T 05-07-2017 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AC028_RS21935 c899e03ca9a97bb00a46ee3475061571 433 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 3 301 22.512 T 05-07-2017 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AC028_RS21935 c899e03ca9a97bb00a46ee3475061571 433 Pfam PF01171 PP-loop family 16 193 6.9E-55 T 05-07-2017 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AC028_RS21935 c899e03ca9a97bb00a46ee3475061571 433 SUPERFAMILY SSF82829 236 312 4.97E-14 T 05-07-2017 AC028_RS21935 c899e03ca9a97bb00a46ee3475061571 433 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 16 197 5.5E-50 T 05-07-2017 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AC028_RS21935 c899e03ca9a97bb00a46ee3475061571 433 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 353 398 8.6E-15 T 05-07-2017 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AC028_RS13655 f6f4d31b2e4bdb39edfaba555a395c6a 582 SMART SM00766 451 576 4.3E-35 T 05-07-2017 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AC028_RS13655 f6f4d31b2e4bdb39edfaba555a395c6a 582 Pfam PF10410 DnaB-helicase binding domain of primase 371 424 7.2E-11 T 05-07-2017 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 AC028_RS13655 f6f4d31b2e4bdb39edfaba555a395c6a 582 Gene3D G3DSA:3.90.980.10 113 242 3.1E-40 T 05-07-2017 IPR013264 DNA primase, catalytic core, N-terminal AC028_RS13655 f6f4d31b2e4bdb39edfaba555a395c6a 582 SUPERFAMILY SSF57783 1 99 1.36E-35 T 05-07-2017 AC028_RS13655 f6f4d31b2e4bdb39edfaba555a395c6a 582 Gene3D G3DSA:3.40.1360.10 243 368 3.9E-45 T 05-07-2017 AC028_RS13655 f6f4d31b2e4bdb39edfaba555a395c6a 582 Gene3D G3DSA:3.90.580.10 2 100 3.3E-39 T 05-07-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AC028_RS13655 f6f4d31b2e4bdb39edfaba555a395c6a 582 SMART SM00400 35 89 6.2E-32 T 05-07-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AC028_RS13655 f6f4d31b2e4bdb39edfaba555a395c6a 582 Pfam PF13155 Toprim-like 264 350 3.7E-14 T 05-07-2017 AC028_RS13655 f6f4d31b2e4bdb39edfaba555a395c6a 582 Pfam PF08278 DNA primase DnaG DnaB-binding 452 575 2.0E-26 T 05-07-2017 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AC028_RS13655 f6f4d31b2e4bdb39edfaba555a395c6a 582 SMART SM00493 261 332 1.1E-20 T 05-07-2017 IPR006171 Toprim domain AC028_RS13655 f6f4d31b2e4bdb39edfaba555a395c6a 582 Gene3D G3DSA:1.10.860.10 438 580 1.2E-42 T 05-07-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AC028_RS13655 f6f4d31b2e4bdb39edfaba555a395c6a 582 Gene3D G3DSA:1.20.50.20 370 424 9.3E-21 T 05-07-2017 AC028_RS13655 f6f4d31b2e4bdb39edfaba555a395c6a 582 TIGRFAM TIGR01391 dnaG: DNA primase 3 419 5.3E-138 T 05-07-2017 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AC028_RS13655 f6f4d31b2e4bdb39edfaba555a395c6a 582 PIRSF PIRSF002811 1 581 1.4E-135 T 05-07-2017 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AC028_RS13655 f6f4d31b2e4bdb39edfaba555a395c6a 582 Pfam PF01807 CHC2 zinc finger 5 100 9.4E-38 T 05-07-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AC028_RS13655 f6f4d31b2e4bdb39edfaba555a395c6a 582 Hamap MF_00974 DNA primase [dnaG]. 3 577 28.825 T 05-07-2017 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AC028_RS13655 f6f4d31b2e4bdb39edfaba555a395c6a 582 SUPERFAMILY SSF117023 448 579 1.57E-34 T 05-07-2017 AC028_RS13655 f6f4d31b2e4bdb39edfaba555a395c6a 582 Pfam PF08275 DNA primase catalytic core, N-terminal domain 124 253 2.1E-38 T 05-07-2017 IPR013264 DNA primase, catalytic core, N-terminal AC028_RS13655 f6f4d31b2e4bdb39edfaba555a395c6a 582 SUPERFAMILY SSF56731 114 424 2.22E-104 T 05-07-2017 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 Gene3D G3DSA:1.10.150.20 718 824 2.8E-34 T 05-07-2017 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 Pfam PF01612 3'-5' exonuclease 336 522 5.1E-36 T 05-07-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 SUPERFAMILY SSF88723 1 165 9.25E-51 T 05-07-2017 IPR029060 PIN domain-like AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 Gene3D G3DSA:1.20.1060.10 549 669 9.1E-38 T 05-07-2017 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 Gene3D G3DSA:3.40.50.1010 3 179 5.8E-63 T 05-07-2017 IPR029060 PIN domain-like AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 706 729 3.0E-79 T 05-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 661 683 3.0E-79 T 05-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 819 830 3.0E-79 T 05-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 881 894 3.0E-79 T 05-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 851 867 3.0E-79 T 05-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 797 808 3.0E-79 T 05-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 684 699 3.0E-79 T 05-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 736 749 3.0E-79 T 05-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 760 785 3.0E-79 T 05-07-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 SUPERFAMILY SSF53098 339 523 2.15E-51 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 Gene3D G3DSA:3.30.70.370 825 934 1.6E-64 T 05-07-2017 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 Gene3D G3DSA:3.30.70.370 670 717 1.6E-64 T 05-07-2017 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 SMART SM00475 2 256 5.0E-108 T 05-07-2017 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 Gene3D G3DSA:1.10.150.20 180 241 1.6E-26 T 05-07-2017 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 SMART SM00474 336 523 1.0E-29 T 05-07-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 SMART SM00482 692 898 2.2E-106 T 05-07-2017 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 SMART SM00279 168 203 1.4E-14 T 05-07-2017 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 3 165 2.7E-47 T 05-07-2017 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 Pfam PF00476 DNA polymerase family A 557 931 2.8E-147 T 05-07-2017 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 166 260 2.1E-27 T 05-07-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 SUPERFAMILY SSF56672 528 934 7.34E-154 T 05-07-2017 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 TIGRFAM TIGR00593 pola: DNA polymerase I 4 934 2.5E-268 T 05-07-2017 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 ProSitePatterns PS00447 DNA polymerase family A signature. 760 779 - T 05-07-2017 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 SUPERFAMILY SSF47807 166 280 2.54E-31 T 05-07-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AC028_RS04860 960e621fd81e973c2573b68e16d59827 934 Gene3D G3DSA:3.30.420.10 334 548 2.9E-82 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS08370 31592b4373cd5642ff719f928001be82 148 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 148 72.351 T 05-07-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AC028_RS08370 31592b4373cd5642ff719f928001be82 148 SUPERFAMILY SSF52304 3 145 1.44E-59 T 05-07-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AC028_RS08370 31592b4373cd5642ff719f928001be82 148 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 18 142 2.0E-67 T 05-07-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AC028_RS08370 31592b4373cd5642ff719f928001be82 148 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 142 2.1E-55 T 05-07-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AC028_RS08370 31592b4373cd5642ff719f928001be82 148 Pfam PF01220 Dehydroquinase class II 4 140 1.2E-56 T 05-07-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AC028_RS08370 31592b4373cd5642ff719f928001be82 148 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 05-07-2017 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AC028_RS08370 31592b4373cd5642ff719f928001be82 148 Gene3D G3DSA:3.40.50.9100 3 146 2.2E-64 T 05-07-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AC028_RS08370 31592b4373cd5642ff719f928001be82 148 PIRSF PIRSF001399 1 147 1.5E-56 T 05-07-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AC028_RS02975 7c2e9cb494f4e7b847a6e02cbdf68092 423 Gene3D G3DSA:3.40.640.10 56 286 2.2E-69 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS02975 7c2e9cb494f4e7b847a6e02cbdf68092 423 SUPERFAMILY SSF53383 10 405 1.34E-90 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS02975 7c2e9cb494f4e7b847a6e02cbdf68092 423 Gene3D G3DSA:3.90.1150.10 287 406 1.9E-24 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS02975 7c2e9cb494f4e7b847a6e02cbdf68092 423 Pfam PF00155 Aminotransferase class I and II 39 390 5.3E-52 T 05-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AC028_RS06190 ccc342f0ff8df478f72f1e1f8f9c81fe 493 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 259 266 - T 05-07-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AC028_RS06190 ccc342f0ff8df478f72f1e1f8f9c81fe 493 Pfam PF00171 Aldehyde dehydrogenase family 26 481 1.3E-149 T 05-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AC028_RS06190 ccc342f0ff8df478f72f1e1f8f9c81fe 493 Gene3D G3DSA:3.40.309.10 275 457 1.6E-58 T 05-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AC028_RS06190 ccc342f0ff8df478f72f1e1f8f9c81fe 493 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 287 298 - T 05-07-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AC028_RS06190 ccc342f0ff8df478f72f1e1f8f9c81fe 493 SUPERFAMILY SSF53720 14 485 1.7E-143 T 05-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AC028_RS06190 ccc342f0ff8df478f72f1e1f8f9c81fe 493 Gene3D G3DSA:3.40.605.10 18 274 4.4E-82 T 05-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AC028_RS11520 e21148476d8bc5b049754d95333fdf3d 295 Pfam PF08544 GHMP kinases C terminal 213 269 5.1E-6 T 05-07-2017 IPR013750 GHMP kinase, C-terminal domain AC028_RS11520 e21148476d8bc5b049754d95333fdf3d 295 Gene3D G3DSA:3.30.70.890 172 288 1.5E-33 T 05-07-2017 IPR013750 GHMP kinase, C-terminal domain AC028_RS11520 e21148476d8bc5b049754d95333fdf3d 295 SUPERFAMILY SSF55060 171 287 1.01E-25 T 05-07-2017 IPR013750 GHMP kinase, C-terminal domain AC028_RS11520 e21148476d8bc5b049754d95333fdf3d 295 PIRSF PIRSF010376 13 291 5.0E-85 T 05-07-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AC028_RS11520 e21148476d8bc5b049754d95333fdf3d 295 Gene3D G3DSA:3.30.230.10 17 170 1.6E-53 T 05-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_RS11520 e21148476d8bc5b049754d95333fdf3d 295 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 16 286 9.7E-72 T 05-07-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AC028_RS11520 e21148476d8bc5b049754d95333fdf3d 295 Pfam PF00288 GHMP kinases N terminal domain 99 155 6.1E-10 T 05-07-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 AC028_RS11520 e21148476d8bc5b049754d95333fdf3d 295 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 15 283 31.8 T 05-07-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AC028_RS11520 e21148476d8bc5b049754d95333fdf3d 295 SUPERFAMILY SSF54211 17 170 1.06E-43 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS04695 a8f89145ed27d2779950b341fcb5e3f7 657 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 62 254 6.4E-55 T 05-07-2017 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AC028_RS04695 a8f89145ed27d2779950b341fcb5e3f7 657 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 256 550 3.1E-107 T 05-07-2017 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AC028_RS04695 a8f89145ed27d2779950b341fcb5e3f7 657 SUPERFAMILY SSF51735 49 257 7.09E-55 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS04695 a8f89145ed27d2779950b341fcb5e3f7 657 Gene3D G3DSA:3.30.360.10 254 546 2.1E-113 T 05-07-2017 AC028_RS04695 a8f89145ed27d2779950b341fcb5e3f7 657 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 58 552 77.625 T 05-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AC028_RS04695 a8f89145ed27d2779950b341fcb5e3f7 657 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 210 223 4.7E-47 T 05-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AC028_RS04695 a8f89145ed27d2779950b341fcb5e3f7 657 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 391 417 4.7E-47 T 05-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AC028_RS04695 a8f89145ed27d2779950b341fcb5e3f7 657 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 286 303 4.7E-47 T 05-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AC028_RS04695 a8f89145ed27d2779950b341fcb5e3f7 657 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 304 320 4.7E-47 T 05-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AC028_RS04695 a8f89145ed27d2779950b341fcb5e3f7 657 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 234 262 4.7E-47 T 05-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AC028_RS04695 a8f89145ed27d2779950b341fcb5e3f7 657 SUPERFAMILY SSF55347 244 549 2.91E-110 T 05-07-2017 AC028_RS04695 a8f89145ed27d2779950b341fcb5e3f7 657 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 58 551 4.6E-177 T 05-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AC028_RS04695 a8f89145ed27d2779950b341fcb5e3f7 657 Gene3D G3DSA:3.40.50.720 57 253 9.1E-60 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS04695 a8f89145ed27d2779950b341fcb5e3f7 657 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 244 250 - T 05-07-2017 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AC028_RS02260 cd281505b65443fa6ceed09727a12dca 488 SUPERFAMILY SSF52935 327 476 1.57E-34 T 05-07-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AC028_RS02260 cd281505b65443fa6ceed09727a12dca 488 SUPERFAMILY SSF50800 74 171 4.54E-24 T 05-07-2017 IPR011037 Pyruvate kinase-like, insert domain AC028_RS02260 cd281505b65443fa6ceed09727a12dca 488 Gene3D G3DSA:2.40.33.10 77 171 1.1E-26 T 05-07-2017 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AC028_RS02260 cd281505b65443fa6ceed09727a12dca 488 Gene3D G3DSA:3.20.20.60 172 328 1.0E-92 T 05-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AC028_RS02260 cd281505b65443fa6ceed09727a12dca 488 Gene3D G3DSA:3.20.20.60 6 76 1.0E-92 T 05-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AC028_RS02260 cd281505b65443fa6ceed09727a12dca 488 SUPERFAMILY SSF51621 171 342 5.93E-88 T 05-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AC028_RS02260 cd281505b65443fa6ceed09727a12dca 488 SUPERFAMILY SSF51621 4 79 5.93E-88 T 05-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AC028_RS02260 cd281505b65443fa6ceed09727a12dca 488 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 476 4.4E-157 T 05-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AC028_RS02260 cd281505b65443fa6ceed09727a12dca 488 Pfam PF00224 Pyruvate kinase, barrel domain 6 342 3.1E-122 T 05-07-2017 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AC028_RS02260 cd281505b65443fa6ceed09727a12dca 488 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 05-07-2017 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AC028_RS02260 cd281505b65443fa6ceed09727a12dca 488 Pfam PF02887 Pyruvate kinase, alpha/beta domain 360 473 4.3E-24 T 05-07-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AC028_RS02260 cd281505b65443fa6ceed09727a12dca 488 PRINTS PR01050 Pyruvate kinase family signature 272 296 4.8E-56 T 05-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AC028_RS02260 cd281505b65443fa6ceed09727a12dca 488 PRINTS PR01050 Pyruvate kinase family signature 63 79 4.8E-56 T 05-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AC028_RS02260 cd281505b65443fa6ceed09727a12dca 488 PRINTS PR01050 Pyruvate kinase family signature 247 271 4.8E-56 T 05-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AC028_RS02260 cd281505b65443fa6ceed09727a12dca 488 PRINTS PR01050 Pyruvate kinase family signature 190 204 4.8E-56 T 05-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AC028_RS02260 cd281505b65443fa6ceed09727a12dca 488 PRINTS PR01050 Pyruvate kinase family signature 297 315 4.8E-56 T 05-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AC028_RS02260 cd281505b65443fa6ceed09727a12dca 488 PRINTS PR01050 Pyruvate kinase family signature 220 246 4.8E-56 T 05-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AC028_RS02260 cd281505b65443fa6ceed09727a12dca 488 PRINTS PR01050 Pyruvate kinase family signature 316 332 4.8E-56 T 05-07-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AC028_RS02260 cd281505b65443fa6ceed09727a12dca 488 Gene3D G3DSA:3.40.1380.20 329 476 7.0E-37 T 05-07-2017 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AC028_RS18545 add9bd2f0a2e0dfe49f987ecf2d9c5c2 369 PIRSF PIRSF000390 1 368 5.8E-102 T 05-07-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AC028_RS18545 add9bd2f0a2e0dfe49f987ecf2d9c5c2 369 Gene3D G3DSA:3.40.640.10 14 239 3.5E-66 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS18545 add9bd2f0a2e0dfe49f987ecf2d9c5c2 369 Gene3D G3DSA:3.90.1150.10 242 364 8.8E-26 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS18545 add9bd2f0a2e0dfe49f987ecf2d9c5c2 369 SUPERFAMILY SSF53383 2 364 1.27E-96 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS18545 add9bd2f0a2e0dfe49f987ecf2d9c5c2 369 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 362 5.7E-98 T 05-07-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AC028_RS20380 03a3d1cffdc2b9b87e16b0525ebfd37a 246 SUPERFAMILY SSF51735 4 244 1.8E-81 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS20380 03a3d1cffdc2b9b87e16b0525ebfd37a 246 Gene3D G3DSA:3.40.50.720 2 244 1.3E-84 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS20380 03a3d1cffdc2b9b87e16b0525ebfd37a 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 05-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AC028_RS20380 03a3d1cffdc2b9b87e16b0525ebfd37a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.0E-44 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS20380 03a3d1cffdc2b9b87e16b0525ebfd37a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.0E-44 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS20380 03a3d1cffdc2b9b87e16b0525ebfd37a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.0E-44 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS20380 03a3d1cffdc2b9b87e16b0525ebfd37a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 2.0E-44 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS20380 03a3d1cffdc2b9b87e16b0525ebfd37a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 2.0E-44 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS20380 03a3d1cffdc2b9b87e16b0525ebfd37a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.0E-44 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS20380 03a3d1cffdc2b9b87e16b0525ebfd37a 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 183 3.8E-5 T 05-07-2017 AC028_RS20380 03a3d1cffdc2b9b87e16b0525ebfd37a 246 Pfam PF00106 short chain dehydrogenase 5 195 1.1E-59 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS20380 03a3d1cffdc2b9b87e16b0525ebfd37a 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 244 9.3E-123 T 05-07-2017 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216 AC028_RS20380 03a3d1cffdc2b9b87e16b0525ebfd37a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.5E-12 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS20380 03a3d1cffdc2b9b87e16b0525ebfd37a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.5E-12 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS20380 03a3d1cffdc2b9b87e16b0525ebfd37a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.5E-12 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS00835 188091c68a37d6596366f11446df7203 1191 SMART SM00448 1061 1172 3.5E-24 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS00835 188091c68a37d6596366f11446df7203 1191 Pfam PF07495 Y_Y_Y domain 693 755 2.6E-9 T 05-07-2017 IPR011123 Two component regulator three Y AC028_RS00835 188091c68a37d6596366f11446df7203 1191 Pfam PF00512 His Kinase A (phospho-acceptor) domain 810 875 1.4E-15 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS00835 188091c68a37d6596366f11446df7203 1191 Gene3D G3DSA:2.120.10.30 151 215 1.6E-7 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS00835 188091c68a37d6596366f11446df7203 1191 Gene3D G3DSA:2.120.10.30 365 376 1.6E-7 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS00835 188091c68a37d6596366f11446df7203 1191 Gene3D G3DSA:2.120.10.30 256 287 1.6E-7 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS00835 188091c68a37d6596366f11446df7203 1191 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 922 1036 1.9E-24 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS00835 188091c68a37d6596366f11446df7203 1191 SMART SM00388 810 875 8.0E-21 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS00835 188091c68a37d6596366f11446df7203 1191 Pfam PF07494 Two component regulator propeller 35 57 0.0017 T 05-07-2017 IPR011110 Two component regulator propeller AC028_RS00835 188091c68a37d6596366f11446df7203 1191 SUPERFAMILY SSF50998 354 590 5.18E-13 T 05-07-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AC028_RS00835 188091c68a37d6596366f11446df7203 1191 SUPERFAMILY SSF50998 132 284 5.18E-13 T 05-07-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AC028_RS00835 188091c68a37d6596366f11446df7203 1191 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1022 1035 2.1E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS00835 188091c68a37d6596366f11446df7203 1191 PRINTS PR00344 Bacterial sensor protein C-terminal signature 962 976 2.1E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS00835 188091c68a37d6596366f11446df7203 1191 PRINTS PR00344 Bacterial sensor protein C-terminal signature 998 1016 2.1E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS00835 188091c68a37d6596366f11446df7203 1191 PRINTS PR00344 Bacterial sensor protein C-terminal signature 980 990 2.1E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS00835 188091c68a37d6596366f11446df7203 1191 SMART SM00387 922 1038 4.4E-32 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS00835 188091c68a37d6596366f11446df7203 1191 Gene3D G3DSA:2.120.10.30 43 150 1.5E-4 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS00835 188091c68a37d6596366f11446df7203 1191 Gene3D G3DSA:2.120.10.30 404 596 4.4E-6 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS00835 188091c68a37d6596366f11446df7203 1191 Gene3D G3DSA:3.40.50.2300 1057 1180 6.3E-30 T 05-07-2017 AC028_RS00835 188091c68a37d6596366f11446df7203 1191 SUPERFAMILY SSF55874 864 1040 9.82E-46 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS00835 188091c68a37d6596366f11446df7203 1191 Gene3D G3DSA:1.10.287.130 805 871 6.7E-13 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS00835 188091c68a37d6596366f11446df7203 1191 SUPERFAMILY SSF52172 1060 1177 4.55E-29 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS00835 188091c68a37d6596366f11446df7203 1191 Pfam PF00072 Response regulator receiver domain 1064 1172 1.1E-19 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS00835 188091c68a37d6596366f11446df7203 1191 Gene3D G3DSA:3.30.565.10 876 1037 3.2E-47 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS00835 188091c68a37d6596366f11446df7203 1191 SUPERFAMILY SSF47384 798 876 1.86E-17 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS01850 52d058c18788fac61d1f5cfa37cce9ae 389 Pfam PF00549 CoA-ligase 262 382 4.2E-26 T 05-07-2017 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AC028_RS01850 52d058c18788fac61d1f5cfa37cce9ae 389 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 41.451 T 05-07-2017 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AC028_RS01850 52d058c18788fac61d1f5cfa37cce9ae 389 PIRSF PIRSF001554 1 388 2.1E-147 T 05-07-2017 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AC028_RS01850 52d058c18788fac61d1f5cfa37cce9ae 389 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 05-07-2017 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AC028_RS01850 52d058c18788fac61d1f5cfa37cce9ae 389 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 4.8E-157 T 05-07-2017 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AC028_RS01850 52d058c18788fac61d1f5cfa37cce9ae 389 Gene3D G3DSA:3.40.50.261 241 383 4.2E-64 T 05-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AC028_RS01850 52d058c18788fac61d1f5cfa37cce9ae 389 SUPERFAMILY SSF56059 1 238 1.56E-75 T 05-07-2017 AC028_RS01850 52d058c18788fac61d1f5cfa37cce9ae 389 Gene3D G3DSA:3.30.1490.20 22 96 4.0E-28 T 05-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AC028_RS01850 52d058c18788fac61d1f5cfa37cce9ae 389 Gene3D G3DSA:3.30.470.20 97 239 7.1E-51 T 05-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AC028_RS01850 52d058c18788fac61d1f5cfa37cce9ae 389 SUPERFAMILY SSF52210 239 385 3.4E-53 T 05-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AC028_RS01850 52d058c18788fac61d1f5cfa37cce9ae 389 Pfam PF08442 ATP-grasp domain 2 202 9.6E-73 T 05-07-2017 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AC028_RS21320 4a8c2dc2f8bd594c3bcce6e33d6a7300 180 ProSitePatterns PS00938 Initiation factor 3 signature. 67 80 - T 05-07-2017 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 AC028_RS21320 4a8c2dc2f8bd594c3bcce6e33d6a7300 180 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 92 177 3.3E-36 T 05-07-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AC028_RS21320 4a8c2dc2f8bd594c3bcce6e33d6a7300 180 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 17 85 3.9E-30 T 05-07-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AC028_RS21320 4a8c2dc2f8bd594c3bcce6e33d6a7300 180 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 17 179 2.0E-63 T 05-07-2017 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AC028_RS21320 4a8c2dc2f8bd594c3bcce6e33d6a7300 180 SUPERFAMILY SSF54364 15 87 2.88E-29 T 05-07-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AC028_RS21320 4a8c2dc2f8bd594c3bcce6e33d6a7300 180 Gene3D G3DSA:3.10.20.80 11 87 2.1E-35 T 05-07-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AC028_RS21320 4a8c2dc2f8bd594c3bcce6e33d6a7300 180 Gene3D G3DSA:3.30.110.10 88 179 5.4E-38 T 05-07-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AC028_RS21320 4a8c2dc2f8bd594c3bcce6e33d6a7300 180 SUPERFAMILY SSF55200 92 179 5.76E-31 T 05-07-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AC028_RS21320 4a8c2dc2f8bd594c3bcce6e33d6a7300 180 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 10 179 31.163 T 05-07-2017 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AC028_RS12000 405ae018e941339852e8411d1ac9153b 445 SMART SM00388 212 276 2.6E-20 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS12000 405ae018e941339852e8411d1ac9153b 445 Pfam PF00512 His Kinase A (phospho-acceptor) domain 213 275 4.7E-18 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS12000 405ae018e941339852e8411d1ac9153b 445 SMART SM00387 319 431 9.5E-32 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS12000 405ae018e941339852e8411d1ac9153b 445 Gene3D G3DSA:1.10.287.130 204 262 2.5E-20 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS12000 405ae018e941339852e8411d1ac9153b 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 2.9E-11 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS12000 405ae018e941339852e8411d1ac9153b 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 384 2.9E-11 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS12000 405ae018e941339852e8411d1ac9153b 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 428 2.9E-11 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS12000 405ae018e941339852e8411d1ac9153b 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 2.9E-11 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS12000 405ae018e941339852e8411d1ac9153b 445 Gene3D G3DSA:3.30.565.10 263 427 2.8E-41 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS12000 405ae018e941339852e8411d1ac9153b 445 SUPERFAMILY SSF47384 199 276 1.06E-18 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS12000 405ae018e941339852e8411d1ac9153b 445 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 102 427 1.7E-123 T 05-07-2017 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 AC028_RS12000 405ae018e941339852e8411d1ac9153b 445 SUPERFAMILY SSF55785 92 203 8.67E-7 T 05-07-2017 IPR000014 PAS domain AC028_RS12000 405ae018e941339852e8411d1ac9153b 445 SUPERFAMILY SSF55874 265 427 8.38E-38 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS12000 405ae018e941339852e8411d1ac9153b 445 Pfam PF11808 Domain of unknown function (DUF3329) 13 98 1.1E-21 T 05-07-2017 IPR021766 Protein of unknown function DUF3329 GO:0004673 AC028_RS12000 405ae018e941339852e8411d1ac9153b 445 Gene3D G3DSA:3.30.450.20 104 203 1.6E-5 T 05-07-2017 AC028_RS12000 405ae018e941339852e8411d1ac9153b 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 428 4.3E-22 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS00390 145e4ed6a93b442ec77261c921585dd6 110 SUPERFAMILY SSF47781 25 91 3.22E-25 T 05-07-2017 IPR010994 RuvA domain 2-like AC028_RS00390 145e4ed6a93b442ec77261c921585dd6 110 Gene3D G3DSA:1.10.150.320 25 95 9.4E-18 T 05-07-2017 AC028_RS00390 145e4ed6a93b442ec77261c921585dd6 110 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 26 86 2.2E-22 T 05-07-2017 IPR004509 Competence protein ComEA, helix-hairpin-helix domain AC028_RS00390 145e4ed6a93b442ec77261c921585dd6 110 Pfam PF12836 Helix-hairpin-helix motif 26 86 9.3E-22 T 05-07-2017 AC028_RS11665 cb9ee8c4350acecbc8a271c4f6c5fc72 111 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.371 T 05-07-2017 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11665 cb9ee8c4350acecbc8a271c4f6c5fc72 111 Pfam PF00237 Ribosomal protein L22p/L17e 8 107 7.1E-32 T 05-07-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AC028_RS11665 cb9ee8c4350acecbc8a271c4f6c5fc72 111 SUPERFAMILY SSF54843 1 108 2.88E-41 T 05-07-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AC028_RS11665 cb9ee8c4350acecbc8a271c4f6c5fc72 111 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 05-07-2017 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11665 cb9ee8c4350acecbc8a271c4f6c5fc72 111 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.5E-45 T 05-07-2017 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11665 cb9ee8c4350acecbc8a271c4f6c5fc72 111 Gene3D G3DSA:3.90.470.10 1 109 1.9E-41 T 05-07-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AC028_RS14965 1009385d8fa5e6522b0a114446b8752f 359 SUPERFAMILY SSF100879 238 338 7.46E-21 T 05-07-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AC028_RS14965 1009385d8fa5e6522b0a114446b8752f 359 SUPERFAMILY SSF56672 1 233 1.78E-93 T 05-07-2017 AC028_RS14965 1009385d8fa5e6522b0a114446b8752f 359 Gene3D G3DSA:3.30.70.270 65 163 3.5E-36 T 05-07-2017 AC028_RS14965 1009385d8fa5e6522b0a114446b8752f 359 Pfam PF11799 impB/mucB/samB family C-terminal domain 234 346 4.0E-16 T 05-07-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AC028_RS14965 1009385d8fa5e6522b0a114446b8752f 359 Hamap MF_01113 DNA polymerase IV [dinB]. 1 351 37.834 T 05-07-2017 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AC028_RS14965 1009385d8fa5e6522b0a114446b8752f 359 Pfam PF00817 impB/mucB/samB family 7 153 7.2E-53 T 05-07-2017 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AC028_RS14965 1009385d8fa5e6522b0a114446b8752f 359 Gene3D G3DSA:3.30.1490.100 240 344 2.9E-25 T 05-07-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AC028_RS14965 1009385d8fa5e6522b0a114446b8752f 359 Gene3D G3DSA:1.10.150.20 165 234 9.6E-25 T 05-07-2017 AC028_RS11295 ff83bed86a902d61c6cf98c7c06a3a55 146 Pfam PF14760 Rnk N-terminus 11 50 3.9E-12 T 05-07-2017 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain AC028_RS11295 ff83bed86a902d61c6cf98c7c06a3a55 146 Gene3D G3DSA:3.10.50.30 53 143 7.7E-31 T 05-07-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AC028_RS11295 ff83bed86a902d61c6cf98c7c06a3a55 146 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 57 132 9.9E-22 T 05-07-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AC028_RS11295 ff83bed86a902d61c6cf98c7c06a3a55 146 SUPERFAMILY SSF54534 56 131 8.76E-19 T 05-07-2017 AC028_RS11295 ff83bed86a902d61c6cf98c7c06a3a55 146 Gene3D G3DSA:1.10.286.20 11 50 2.4E-12 T 05-07-2017 AC028_RS03810 83b555f32e371f046dc140baa4dfbe6c 366 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 73 86 - T 05-07-2017 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-70614 AC028_RS03810 83b555f32e371f046dc140baa4dfbe6c 366 PIRSF PIRSF000188 1 351 6.1E-152 T 05-07-2017 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 AC028_RS03810 83b555f32e371f046dc140baa4dfbe6c 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 65 79 8.3E-18 T 05-07-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 AC028_RS03810 83b555f32e371f046dc140baa4dfbe6c 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 285 296 8.3E-18 T 05-07-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 AC028_RS03810 83b555f32e371f046dc140baa4dfbe6c 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 175 195 8.3E-18 T 05-07-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 AC028_RS03810 83b555f32e371f046dc140baa4dfbe6c 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 131 153 8.3E-18 T 05-07-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 AC028_RS03810 83b555f32e371f046dc140baa4dfbe6c 366 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 12 127 8.9E-27 T 05-07-2017 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 AC028_RS03810 83b555f32e371f046dc140baa4dfbe6c 366 Gene3D G3DSA:3.40.50.720 147 335 4.0E-50 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS03810 83b555f32e371f046dc140baa4dfbe6c 366 SMART SM00839 143 350 1.5E-76 T 05-07-2017 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 AC028_RS03810 83b555f32e371f046dc140baa4dfbe6c 366 Gene3D G3DSA:3.40.192.10 2 146 1.6E-63 T 05-07-2017 AC028_RS03810 83b555f32e371f046dc140baa4dfbe6c 366 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 217 299 2.7E-13 T 05-07-2017 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 AC028_RS03810 83b555f32e371f046dc140baa4dfbe6c 366 SUPERFAMILY SSF53223 3 143 1.15E-46 T 05-07-2017 AC028_RS03810 83b555f32e371f046dc140baa4dfbe6c 366 SUPERFAMILY SSF51735 141 344 1.6E-49 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS22235 1bf63b4de1505a4902a0dee429830bf6 1154 Gene3D G3DSA:3.40.50.300 804 961 2.1E-35 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS22235 1bf63b4de1505a4902a0dee429830bf6 1154 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 153 1087 0.0 T 05-07-2017 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AC028_RS22235 1bf63b4de1505a4902a0dee429830bf6 1154 Pfam PF02559 CarD-like/TRCF domain 485 579 7.1E-24 T 05-07-2017 IPR003711 CarD-like/TRCF domain AC028_RS22235 1bf63b4de1505a4902a0dee429830bf6 1154 SUPERFAMILY SSF52540 360 470 4.46E-21 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS22235 1bf63b4de1505a4902a0dee429830bf6 1154 SMART SM00982 1014 1114 1.0E-49 T 05-07-2017 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AC028_RS22235 1bf63b4de1505a4902a0dee429830bf6 1154 SUPERFAMILY SSF52540 24 346 1.17E-93 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS22235 1bf63b4de1505a4902a0dee429830bf6 1154 Gene3D G3DSA:3.30.2060.10 136 214 4.7E-12 T 05-07-2017 AC028_RS22235 1bf63b4de1505a4902a0dee429830bf6 1154 SMART SM00487 605 795 9.8E-35 T 05-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_RS22235 1bf63b4de1505a4902a0dee429830bf6 1154 SMART SM01058 484 581 2.0E-47 T 05-07-2017 IPR003711 CarD-like/TRCF domain AC028_RS22235 1bf63b4de1505a4902a0dee429830bf6 1154 SUPERFAMILY SSF143517 1006 1152 7.19E-42 T 05-07-2017 AC028_RS22235 1bf63b4de1505a4902a0dee429830bf6 1154 Pfam PF03461 TRCF domain 1015 1107 7.6E-27 T 05-07-2017 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AC028_RS22235 1bf63b4de1505a4902a0dee429830bf6 1154 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 27 1113 28.831 T 05-07-2017 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AC028_RS22235 1bf63b4de1505a4902a0dee429830bf6 1154 SUPERFAMILY SSF52540 528 789 1.73E-60 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS22235 1bf63b4de1505a4902a0dee429830bf6 1154 SUPERFAMILY SSF52540 787 994 4.86E-44 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS22235 1bf63b4de1505a4902a0dee429830bf6 1154 Gene3D G3DSA:3.40.50.300 592 791 5.5E-57 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS22235 1bf63b4de1505a4902a0dee429830bf6 1154 SMART SM00490 831 915 7.4E-19 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS22235 1bf63b4de1505a4902a0dee429830bf6 1154 SUPERFAMILY SSF141259 476 553 2.88E-21 T 05-07-2017 IPR003711 CarD-like/TRCF domain AC028_RS22235 1bf63b4de1505a4902a0dee429830bf6 1154 Pfam PF00270 DEAD/DEAH box helicase 613 769 1.3E-16 T 05-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AC028_RS22235 1bf63b4de1505a4902a0dee429830bf6 1154 Pfam PF00271 Helicase conserved C-terminal domain 815 914 5.0E-17 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS02380 c094cf26f6f43300cc6595f0febe1cdb 329 Gene3D G3DSA:3.40.50.1820 17 227 2.2E-20 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS02380 c094cf26f6f43300cc6595f0febe1cdb 329 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 67 78 1.3E-8 T 05-07-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AC028_RS02380 c094cf26f6f43300cc6595f0febe1cdb 329 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 39 47 1.3E-8 T 05-07-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AC028_RS02380 c094cf26f6f43300cc6595f0febe1cdb 329 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 117 131 1.3E-8 T 05-07-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AC028_RS02380 c094cf26f6f43300cc6595f0febe1cdb 329 SUPERFAMILY SSF53474 18 235 9.65E-19 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS02380 c094cf26f6f43300cc6595f0febe1cdb 329 Pfam PF00561 alpha/beta hydrolase fold 37 146 7.0E-10 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS03640 da67169cc068c172594484a6e1dfeb5a 187 Pfam PF04542 Sigma-70 region 2 30 97 2.1E-15 T 05-07-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS03640 da67169cc068c172594484a6e1dfeb5a 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 185 1.1E-28 T 05-07-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS03640 da67169cc068c172594484a6e1dfeb5a 187 Pfam PF08281 Sigma-70, region 4 128 181 2.8E-12 T 05-07-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS03640 da67169cc068c172594484a6e1dfeb5a 187 SUPERFAMILY SSF88659 122 186 6.35E-13 T 05-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS03640 da67169cc068c172594484a6e1dfeb5a 187 Gene3D G3DSA:1.10.10.10 123 186 4.7E-16 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS03640 da67169cc068c172594484a6e1dfeb5a 187 Gene3D G3DSA:1.10.1740.10 8 115 3.7E-25 T 05-07-2017 AC028_RS03640 da67169cc068c172594484a6e1dfeb5a 187 SUPERFAMILY SSF88946 7 106 1.22E-24 T 05-07-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS21000 c9c67754d8db2af85bb40258e129bd23 964 Pfam PF00593 TonB dependent receptor 619 963 1.4E-29 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21000 c9c67754d8db2af85bb40258e129bd23 964 SUPERFAMILY SSF56935 319 646 5.13E-99 T 05-07-2017 AC028_RS21000 c9c67754d8db2af85bb40258e129bd23 964 SUPERFAMILY SSF56935 774 964 5.13E-99 T 05-07-2017 AC028_RS21000 c9c67754d8db2af85bb40258e129bd23 964 SUPERFAMILY SSF56935 698 744 5.13E-99 T 05-07-2017 AC028_RS21000 c9c67754d8db2af85bb40258e129bd23 964 SUPERFAMILY SSF56935 45 234 5.13E-99 T 05-07-2017 AC028_RS21000 c9c67754d8db2af85bb40258e129bd23 964 Gene3D G3DSA:2.170.130.10 48 177 7.3E-36 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS21000 c9c67754d8db2af85bb40258e129bd23 964 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 174 2.7E-26 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS21000 c9c67754d8db2af85bb40258e129bd23 964 Gene3D G3DSA:2.40.170.20 703 964 3.5E-86 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21000 c9c67754d8db2af85bb40258e129bd23 964 Gene3D G3DSA:2.40.170.20 509 671 3.5E-86 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21000 c9c67754d8db2af85bb40258e129bd23 964 Gene3D G3DSA:2.40.170.20 318 447 3.5E-86 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21000 c9c67754d8db2af85bb40258e129bd23 964 Gene3D G3DSA:2.40.170.20 178 246 3.5E-86 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21000 c9c67754d8db2af85bb40258e129bd23 964 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 61 - T 05-07-2017 IPR010916 TonB box, conserved site AC028_RS11590 4644e73116c49e31abfee4cf7e517e33 232 Pfam PF00687 Ribosomal protein L1p/L10e family 29 220 9.4E-46 T 05-07-2017 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AC028_RS11590 4644e73116c49e31abfee4cf7e517e33 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 2.4E-100 T 05-07-2017 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AC028_RS11590 4644e73116c49e31abfee4cf7e517e33 232 PIRSF PIRSF002155 1 227 1.2E-70 T 05-07-2017 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11590 4644e73116c49e31abfee4cf7e517e33 232 Gene3D G3DSA:3.30.190.20 18 67 2.2E-44 T 05-07-2017 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 AC028_RS11590 4644e73116c49e31abfee4cf7e517e33 232 Gene3D G3DSA:3.30.190.20 161 226 2.2E-44 T 05-07-2017 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 AC028_RS11590 4644e73116c49e31abfee4cf7e517e33 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 40.413 T 05-07-2017 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AC028_RS11590 4644e73116c49e31abfee4cf7e517e33 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 05-07-2017 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11590 4644e73116c49e31abfee4cf7e517e33 232 SUPERFAMILY SSF56808 5 225 1.44E-74 T 05-07-2017 IPR023674 Ribosomal protein L1-like AC028_RS11590 4644e73116c49e31abfee4cf7e517e33 232 Gene3D G3DSA:3.40.50.790 68 159 4.4E-35 T 05-07-2017 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AC028_RS11290 6112e1992ffe9c63239c7bb7c245fdc3 322 Pfam PF00923 Transaldolase 17 316 1.4E-90 T 05-07-2017 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 AC028_RS11290 6112e1992ffe9c63239c7bb7c245fdc3 322 Hamap MF_00492 Transaldolase [tal]. 5 320 48.145 T 05-07-2017 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 AC028_RS11290 6112e1992ffe9c63239c7bb7c245fdc3 322 SUPERFAMILY SSF51569 7 319 1.26E-96 T 05-07-2017 AC028_RS11290 6112e1992ffe9c63239c7bb7c245fdc3 322 ProSitePatterns PS00958 Transaldolase active site. 133 150 - T 05-07-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 AC028_RS11290 6112e1992ffe9c63239c7bb7c245fdc3 322 ProSitePatterns PS01054 Transaldolase signature 1. 34 42 - T 05-07-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 AC028_RS11290 6112e1992ffe9c63239c7bb7c245fdc3 322 Gene3D G3DSA:3.20.20.70 6 319 1.9E-109 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS11290 6112e1992ffe9c63239c7bb7c245fdc3 322 TIGRFAM TIGR00874 talAB: transaldolase 7 320 8.7E-120 T 05-07-2017 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 AC028_RS00135 cac607b0f439c73c8331327538480911 735 Gene3D G3DSA:3.30.365.10 596 727 1.2E-57 T 05-07-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AC028_RS00135 cac607b0f439c73c8331327538480911 735 Gene3D G3DSA:3.30.365.10 354 444 1.2E-57 T 05-07-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AC028_RS00135 cac607b0f439c73c8331327538480911 735 SUPERFAMILY SSF56003 130 729 3.93E-163 T 05-07-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AC028_RS00135 cac607b0f439c73c8331327538480911 735 SMART SM01008 32 138 1.5E-25 T 05-07-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AC028_RS00135 cac607b0f439c73c8331327538480911 735 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 32 135 5.6E-19 T 05-07-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AC028_RS00135 cac607b0f439c73c8331327538480911 735 Gene3D G3DSA:3.90.1170.50 7 124 7.4E-31 T 05-07-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AC028_RS00135 cac607b0f439c73c8331327538480911 735 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 162 669 7.9E-120 T 05-07-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AC028_RS00135 cac607b0f439c73c8331327538480911 735 Gene3D G3DSA:3.30.365.10 175 273 2.4E-35 T 05-07-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AC028_RS00135 cac607b0f439c73c8331327538480911 735 SUPERFAMILY SSF54665 10 135 1.26E-30 T 05-07-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AC028_RS00135 cac607b0f439c73c8331327538480911 735 Gene3D G3DSA:3.30.365.10 446 595 6.6E-28 T 05-07-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AC028_RS00135 cac607b0f439c73c8331327538480911 735 Gene3D G3DSA:3.30.365.10 282 306 3.5E-10 T 05-07-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AC028_RS00135 cac607b0f439c73c8331327538480911 735 Gene3D G3DSA:3.30.365.10 125 174 3.5E-10 T 05-07-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AC028_RS18395 2f20f2823faed71d9e1c907e509eb288 281 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 255 267 - T 05-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AC028_RS18395 2f20f2823faed71d9e1c907e509eb288 281 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 82 278 1.7E-76 T 05-07-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AC028_RS18395 2f20f2823faed71d9e1c907e509eb288 281 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 207 222 - T 05-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AC028_RS18395 2f20f2823faed71d9e1c907e509eb288 281 Pfam PF00813 FliP family 82 274 3.5E-72 T 05-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AC028_RS18395 2f20f2823faed71d9e1c907e509eb288 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 80 99 9.3E-61 T 05-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AC028_RS18395 2f20f2823faed71d9e1c907e509eb288 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 207 227 9.3E-61 T 05-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AC028_RS18395 2f20f2823faed71d9e1c907e509eb288 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 99 119 9.3E-61 T 05-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AC028_RS18395 2f20f2823faed71d9e1c907e509eb288 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 119 138 9.3E-61 T 05-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AC028_RS18395 2f20f2823faed71d9e1c907e509eb288 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 228 249 9.3E-61 T 05-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AC028_RS18395 2f20f2823faed71d9e1c907e509eb288 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 252 277 9.3E-61 T 05-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AC028_RS18395 2f20f2823faed71d9e1c907e509eb288 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 178 190 8.7E-17 T 05-07-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AC028_RS18395 2f20f2823faed71d9e1c907e509eb288 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 268 278 8.7E-17 T 05-07-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AC028_RS18395 2f20f2823faed71d9e1c907e509eb288 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 200 212 8.7E-17 T 05-07-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AC028_RS18395 2f20f2823faed71d9e1c907e509eb288 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 78 87 8.7E-17 T 05-07-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AC028_RS18395 2f20f2823faed71d9e1c907e509eb288 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 138 150 8.7E-17 T 05-07-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AC028_RS18395 2f20f2823faed71d9e1c907e509eb288 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 150 164 8.7E-17 T 05-07-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AC028_RS10090 313b0e18d35534869083b3b8784c68e6 467 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 172 410 3.7E-68 T 05-07-2017 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AC028_RS10090 313b0e18d35534869083b3b8784c68e6 467 Gene3D G3DSA:3.20.140.10 6 385 1.8E-8 T 05-07-2017 AC028_RS10090 313b0e18d35534869083b3b8784c68e6 467 SUPERFAMILY SSF51690 171 464 4.32E-47 T 05-07-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AC028_RS10090 313b0e18d35534869083b3b8784c68e6 467 PIRSF PIRSF005943 1 467 6.0E-198 T 05-07-2017 IPR016471 Nicotinamide phosphoribosyl transferase Reactome: R-HSA-1368108|Reactome: R-HSA-197264 AC028_RS14695 79d699e25823d68f59018ca38c914d5c 578 SUPERFAMILY SSF47384 190 271 2.35E-15 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS14695 79d699e25823d68f59018ca38c914d5c 578 Gene3D G3DSA:1.10.287.130 201 265 2.5E-12 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS14695 79d699e25823d68f59018ca38c914d5c 578 SUPERFAMILY SSF55874 259 429 3.01E-37 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS14695 79d699e25823d68f59018ca38c914d5c 578 SUPERFAMILY SSF52172 456 575 4.13E-31 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS14695 79d699e25823d68f59018ca38c914d5c 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 411 4.4E-9 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS14695 79d699e25823d68f59018ca38c914d5c 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 4.4E-9 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS14695 79d699e25823d68f59018ca38c914d5c 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 4.4E-9 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS14695 79d699e25823d68f59018ca38c914d5c 578 SMART SM00388 205 270 7.3E-16 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS14695 79d699e25823d68f59018ca38c914d5c 578 SMART SM00387 317 433 7.4E-31 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS14695 79d699e25823d68f59018ca38c914d5c 578 Gene3D G3DSA:3.40.50.2300 455 575 9.8E-29 T 05-07-2017 AC028_RS14695 79d699e25823d68f59018ca38c914d5c 578 SMART SM00448 457 569 1.6E-25 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS14695 79d699e25823d68f59018ca38c914d5c 578 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 429 5.9E-21 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS14695 79d699e25823d68f59018ca38c914d5c 578 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 270 2.4E-13 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS14695 79d699e25823d68f59018ca38c914d5c 578 Pfam PF00072 Response regulator receiver domain 460 569 1.5E-18 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS14695 79d699e25823d68f59018ca38c914d5c 578 Gene3D G3DSA:3.30.565.10 271 432 1.5E-35 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS01860 84a37fe6ba570ab79220ea7426160543 467 Pfam PF02954 Bacterial regulatory protein, Fis family 424 464 1.2E-14 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS01860 84a37fe6ba570ab79220ea7426160543 467 SUPERFAMILY SSF52172 7 187 6.83E-42 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS01860 84a37fe6ba570ab79220ea7426160543 467 SUPERFAMILY SSF52540 145 386 1.27E-66 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01860 84a37fe6ba570ab79220ea7426160543 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 05-07-2017 IPR025944 Sigma-54 interaction domain, conserved site AC028_RS01860 84a37fe6ba570ab79220ea7426160543 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 05-07-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AC028_RS01860 84a37fe6ba570ab79220ea7426160543 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 05-07-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AC028_RS01860 84a37fe6ba570ab79220ea7426160543 467 SMART SM00448 8 119 1.0E-33 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS01860 84a37fe6ba570ab79220ea7426160543 467 Pfam PF00158 Sigma-54 interaction domain 145 310 1.1E-66 T 05-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AC028_RS01860 84a37fe6ba570ab79220ea7426160543 467 SMART SM00382 164 307 1.1E-8 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS01860 84a37fe6ba570ab79220ea7426160543 467 Pfam PF00072 Response regulator receiver domain 11 117 8.7E-29 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS01860 84a37fe6ba570ab79220ea7426160543 467 Gene3D G3DSA:3.40.50.300 141 316 8.9E-59 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01860 84a37fe6ba570ab79220ea7426160543 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 430 447 2.1E-10 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS01860 84a37fe6ba570ab79220ea7426160543 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 447 467 2.1E-10 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS01860 84a37fe6ba570ab79220ea7426160543 467 SUPERFAMILY SSF46689 358 466 3.72E-13 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS01860 84a37fe6ba570ab79220ea7426160543 467 Gene3D G3DSA:1.10.8.60 317 389 3.0E-22 T 05-07-2017 AC028_RS01860 84a37fe6ba570ab79220ea7426160543 467 Gene3D G3DSA:1.10.10.60 415 467 5.2E-16 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS01860 84a37fe6ba570ab79220ea7426160543 467 Gene3D G3DSA:3.40.50.2300 4 128 4.9E-34 T 05-07-2017 AC028_RS22145 ac2fb4838de22914edd64ee941c04319 198 Gene3D G3DSA:3.10.290.30 16 190 2.7E-42 T 05-07-2017 IPR024047 Protein MM3350-like domain AC028_RS22145 ac2fb4838de22914edd64ee941c04319 198 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 19 187 1.6E-41 T 05-07-2017 IPR012912 Plasmid pRiA4b, Orf3 AC028_RS22145 ac2fb4838de22914edd64ee941c04319 198 SUPERFAMILY SSF159941 18 190 9.15E-45 T 05-07-2017 IPR024047 Protein MM3350-like domain AC028_RS11080 dc8de662a850bae79a2568747d477b25 262 SUPERFAMILY SSF53335 15 259 1.3E-72 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS11080 dc8de662a850bae79a2568747d477b25 262 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 258 5.1E-61 T 05-07-2017 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AC028_RS11080 dc8de662a850bae79a2568747d477b25 262 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 9 258 7.1E-82 T 05-07-2017 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AC028_RS11080 dc8de662a850bae79a2568747d477b25 262 Gene3D G3DSA:3.40.50.150 9 195 4.6E-67 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS11080 dc8de662a850bae79a2568747d477b25 262 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 39 66 - T 05-07-2017 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AC028_RS11080 dc8de662a850bae79a2568747d477b25 262 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 7 261 55.283 T 05-07-2017 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AC028_RS11080 dc8de662a850bae79a2568747d477b25 262 Gene3D G3DSA:1.10.8.100 200 259 1.2E-21 T 05-07-2017 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201 AC028_RS11080 dc8de662a850bae79a2568747d477b25 262 SMART SM00650 23 194 2.3E-80 T 05-07-2017 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AC028_RS03270 9bf0b3743bdb8519f5d60b0974dc1ca5 265 Gene3D G3DSA:3.40.30.10 126 255 1.7E-43 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS03270 9bf0b3743bdb8519f5d60b0974dc1ca5 265 Gene3D G3DSA:3.10.450.70 44 103 1.0E-19 T 05-07-2017 IPR009094 Disulphide bond isomerase, DsbC, N-terminal AC028_RS03270 9bf0b3743bdb8519f5d60b0974dc1ca5 265 SUPERFAMILY SSF54423 55 102 3.27E-11 T 05-07-2017 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AC028_RS03270 9bf0b3743bdb8519f5d60b0974dc1ca5 265 Pfam PF13098 Thioredoxin-like domain 132 253 2.9E-25 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS03270 9bf0b3743bdb8519f5d60b0974dc1ca5 265 Pfam PF10411 Disulfide bond isomerase protein N-terminus 49 101 4.6E-17 T 05-07-2017 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AC028_RS03270 9bf0b3743bdb8519f5d60b0974dc1ca5 265 SUPERFAMILY SSF52833 114 255 7.88E-37 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS17600 19599b4cfc586c0aeb2f809088992135 455 Gene3D G3DSA:3.30.460.10 26 179 1.0E-46 T 05-07-2017 AC028_RS17600 19599b4cfc586c0aeb2f809088992135 455 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 12 448 38.002 T 05-07-2017 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AC028_RS17600 19599b4cfc586c0aeb2f809088992135 455 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 210 272 1.3E-19 T 05-07-2017 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AC028_RS17600 19599b4cfc586c0aeb2f809088992135 455 Gene3D G3DSA:1.10.3090.10 180 413 3.2E-42 T 05-07-2017 AC028_RS17600 19599b4cfc586c0aeb2f809088992135 455 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 25 451 4.4E-152 T 05-07-2017 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AC028_RS17600 19599b4cfc586c0aeb2f809088992135 455 Pfam PF01743 Poly A polymerase head domain 56 182 1.5E-34 T 05-07-2017 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AC028_RS17600 19599b4cfc586c0aeb2f809088992135 455 Pfam PF12626 Polymerase A arginine-rich C-terminus 326 448 3.4E-33 T 05-07-2017 IPR025866 Polymerase A arginine-rich C-terminal domain AC028_RS17600 19599b4cfc586c0aeb2f809088992135 455 SUPERFAMILY SSF81301 27 180 7.74E-39 T 05-07-2017 AC028_RS17600 19599b4cfc586c0aeb2f809088992135 455 SUPERFAMILY SSF81891 183 415 6.02E-44 T 05-07-2017 AC028_RS08365 2298db430bfba38de64b170c84c7fb88 163 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 109 123 2.2E-14 T 05-07-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AC028_RS08365 2298db430bfba38de64b170c84c7fb88 163 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 92 105 2.2E-14 T 05-07-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AC028_RS08365 2298db430bfba38de64b170c84c7fb88 163 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 124 137 2.2E-14 T 05-07-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AC028_RS08365 2298db430bfba38de64b170c84c7fb88 163 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 119 136 - T 05-07-2017 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS08365 2298db430bfba38de64b170c84c7fb88 163 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 162 6.1E-51 T 05-07-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AC028_RS08365 2298db430bfba38de64b170c84c7fb88 163 SUPERFAMILY SSF51230 88 162 3.14E-23 T 05-07-2017 IPR011053 Single hybrid motif AC028_RS08365 2298db430bfba38de64b170c84c7fb88 163 Pfam PF00364 Biotin-requiring enzyme 89 162 1.9E-21 T 05-07-2017 IPR000089 Biotin/lipoyl attachment AC028_RS08365 2298db430bfba38de64b170c84c7fb88 163 Gene3D G3DSA:2.40.50.100 87 162 5.5E-30 T 05-07-2017 AC028_RS00345 aec0ff332cf47a8b82677572b792d1ba 772 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 60 772 2.5E-74 T 05-07-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AC028_RS00345 aec0ff332cf47a8b82677572b792d1ba 772 SUPERFAMILY SSF56935 29 772 4.33E-121 T 05-07-2017 AC028_RS00345 aec0ff332cf47a8b82677572b792d1ba 772 Gene3D G3DSA:2.40.170.20 172 772 2.0E-122 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS00345 aec0ff332cf47a8b82677572b792d1ba 772 Gene3D G3DSA:2.170.130.10 53 164 4.6E-30 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS00345 aec0ff332cf47a8b82677572b792d1ba 772 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 157 1.6E-17 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS00345 aec0ff332cf47a8b82677572b792d1ba 772 Pfam PF00593 TonB dependent receptor 505 770 1.3E-31 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS11900 9109da8ed5909b328df92d9227fd25e7 343 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS11900 9109da8ed5909b328df92d9227fd25e7 343 SUPERFAMILY SSF50331 240 339 7.37E-10 T 05-07-2017 IPR008995 Molybdate/tungstate binding, C-terminal AC028_RS11900 9109da8ed5909b328df92d9227fd25e7 343 SUPERFAMILY SSF52540 3 243 2.66E-84 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11900 9109da8ed5909b328df92d9227fd25e7 343 Gene3D G3DSA:3.40.50.300 4 242 7.1E-79 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11900 9109da8ed5909b328df92d9227fd25e7 343 SMART SM00382 27 214 2.9E-18 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS11900 9109da8ed5909b328df92d9227fd25e7 343 Pfam PF12857 TOBE-like domain 282 336 5.0E-8 T 05-07-2017 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 AC028_RS11900 9109da8ed5909b328df92d9227fd25e7 343 Pfam PF00005 ABC transporter 18 164 3.8E-34 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS11900 9109da8ed5909b328df92d9227fd25e7 343 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 242 3.2E-113 T 05-07-2017 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 315 9.1E-11 T 05-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 05-07-2017 IPR028299 ClpA/B, conserved site 2 AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 Gene3D G3DSA:1.10.8.60 356 439 2.2E-29 T 05-07-2017 AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 650 8.0E-46 T 05-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 SUPERFAMILY SSF52540 171 434 1.96E-67 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 Gene3D G3DSA:3.40.50.300 446 667 5.3E-52 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 SUPERFAMILY SSF81923 1 141 3.53E-56 T 05-07-2017 IPR004176 Clp, N-terminal GO:0019538 AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 Gene3D G3DSA:1.10.1780.10 1 141 3.8E-40 T 05-07-2017 IPR004176 Clp, N-terminal GO:0019538 AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 SUPERFAMILY SSF52540 440 745 3.4E-74 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 Gene3D G3DSA:3.40.50.300 174 352 8.0E-43 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 1.5E-37 T 05-07-2017 IPR001270 ClpA/B family GO:0005524 AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 1.5E-37 T 05-07-2017 IPR001270 ClpA/B family GO:0005524 AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 1.5E-37 T 05-07-2017 IPR001270 ClpA/B family GO:0005524 AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 1.5E-37 T 05-07-2017 IPR001270 ClpA/B family GO:0005524 AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 SMART SM00382 490 626 2.7E-9 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 SMART SM00382 209 354 5.5E-10 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 Gene3D G3DSA:1.10.8.60 668 750 3.4E-29 T 05-07-2017 AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.6E-12 T 05-07-2017 IPR004176 Clp, N-terminal GO:0019538 AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 SMART SM01086 656 745 9.7E-33 T 05-07-2017 IPR019489 Clp ATPase, C-terminal AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 657 736 4.1E-22 T 05-07-2017 IPR019489 Clp ATPase, C-terminal AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 05-07-2017 IPR018368 ClpA/B, conserved site 1 GO:0005524 AC028_RS18725 d87b659de4876abc2abae40d00b19506 760 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 05-07-2017 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 AC028_RS18070 704dd992573f0d25f15cff130580c0a3 728 Pfam PF00990 Diguanylate cyclase, GGDEF domain 302 457 2.1E-42 T 05-07-2017 IPR000160 GGDEF domain AC028_RS18070 704dd992573f0d25f15cff130580c0a3 728 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 133 9.1E-19 T 05-07-2017 IPR000014 PAS domain AC028_RS18070 704dd992573f0d25f15cff130580c0a3 728 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 300 459 7.0E-36 T 05-07-2017 IPR000160 GGDEF domain AC028_RS18070 704dd992573f0d25f15cff130580c0a3 728 SMART SM00086 87 129 8.6E-6 T 05-07-2017 IPR001610 PAC motif AC028_RS18070 704dd992573f0d25f15cff130580c0a3 728 SMART SM00091 14 81 6.6E-7 T 05-07-2017 IPR000014 PAS domain AC028_RS18070 704dd992573f0d25f15cff130580c0a3 728 SMART SM00052 472 719 2.2E-108 T 05-07-2017 IPR001633 EAL domain AC028_RS18070 704dd992573f0d25f15cff130580c0a3 728 Gene3D G3DSA:3.30.450.40 137 301 1.8E-17 T 05-07-2017 IPR029016 GAF domain-like AC028_RS18070 704dd992573f0d25f15cff130580c0a3 728 SUPERFAMILY SSF55073 307 464 1.33E-46 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS18070 704dd992573f0d25f15cff130580c0a3 728 Pfam PF13426 PAS domain 26 128 8.7E-17 T 05-07-2017 IPR000014 PAS domain AC028_RS18070 704dd992573f0d25f15cff130580c0a3 728 PIRSF PIRSF005925 3 728 0.0 T 05-07-2017 AC028_RS18070 704dd992573f0d25f15cff130580c0a3 728 SUPERFAMILY SSF55785 20 127 9.18E-22 T 05-07-2017 IPR000014 PAS domain AC028_RS18070 704dd992573f0d25f15cff130580c0a3 728 Pfam PF00563 EAL domain 478 714 1.1E-72 T 05-07-2017 IPR001633 EAL domain AC028_RS18070 704dd992573f0d25f15cff130580c0a3 728 SUPERFAMILY SSF141868 478 724 2.88E-83 T 05-07-2017 IPR001633 EAL domain AC028_RS18070 704dd992573f0d25f15cff130580c0a3 728 Pfam PF13185 GAF domain 148 289 3.0E-10 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS18070 704dd992573f0d25f15cff130580c0a3 728 Gene3D G3DSA:3.20.20.450 476 725 4.2E-91 T 05-07-2017 IPR001633 EAL domain AC028_RS18070 704dd992573f0d25f15cff130580c0a3 728 SMART SM00267 291 462 4.0E-59 T 05-07-2017 IPR000160 GGDEF domain AC028_RS18070 704dd992573f0d25f15cff130580c0a3 728 SMART SM00065 131 299 8.8E-4 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS18070 704dd992573f0d25f15cff130580c0a3 728 Gene3D G3DSA:3.30.70.270 304 470 5.2E-52 T 05-07-2017 AC028_RS18070 704dd992573f0d25f15cff130580c0a3 728 SUPERFAMILY SSF55781 151 302 4.8E-22 T 05-07-2017 IPR029016 GAF domain-like AC028_RS18070 704dd992573f0d25f15cff130580c0a3 728 Gene3D G3DSA:3.30.450.20 23 128 8.6E-24 T 05-07-2017 AC028_RS13760 b5c88c325446a7aec041ed0b24b8ba74 132 Pfam PF13202 EF hand 103 120 3.2E-5 T 05-07-2017 IPR002048 EF-hand domain GO:0005509 AC028_RS13760 b5c88c325446a7aec041ed0b24b8ba74 132 Gene3D G3DSA:1.10.238.10 75 122 4.2E-9 T 05-07-2017 IPR011992 EF-hand domain pair AC028_RS13760 b5c88c325446a7aec041ed0b24b8ba74 132 ProSitePatterns PS00018 EF-hand calcium-binding domain. 107 119 - T 05-07-2017 IPR018247 EF-Hand 1, calcium-binding site AC028_RS13760 b5c88c325446a7aec041ed0b24b8ba74 132 SUPERFAMILY SSF47473 75 122 1.22E-8 T 05-07-2017 IPR011992 EF-hand domain pair AC028_RS16790 2cbf054f363f15c16cd8f0f4ab66b1ed 78 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 05-07-2017 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS16790 2cbf054f363f15c16cd8f0f4ab66b1ed 78 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 1.0E-21 T 05-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS16790 2cbf054f363f15c16cd8f0f4ab66b1ed 78 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 75 18.362 T 05-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS16790 2cbf054f363f15c16cd8f0f4ab66b1ed 78 Gene3D G3DSA:4.10.640.10 8 76 1.8E-29 T 05-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS16790 2cbf054f363f15c16cd8f0f4ab66b1ed 78 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 4.3E-16 T 05-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS16790 2cbf054f363f15c16cd8f0f4ab66b1ed 78 PRINTS PR00974 Ribosomal protein S18 family signature 48 62 4.3E-16 T 05-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS16790 2cbf054f363f15c16cd8f0f4ab66b1ed 78 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 4.3E-16 T 05-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS16790 2cbf054f363f15c16cd8f0f4ab66b1ed 78 PRINTS PR00974 Ribosomal protein S18 family signature 62 72 4.3E-16 T 05-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS16790 2cbf054f363f15c16cd8f0f4ab66b1ed 78 Pfam PF01084 Ribosomal protein S18 18 70 4.7E-22 T 05-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS16790 2cbf054f363f15c16cd8f0f4ab66b1ed 78 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 74 7.8E-34 T 05-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS16790 2cbf054f363f15c16cd8f0f4ab66b1ed 78 SUPERFAMILY SSF46911 3 76 3.92E-26 T 05-07-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS13430 90f155ea1fb8823492af186e640b21a2 375 Pfam PF01757 Acyltransferase family 4 346 4.6E-25 T 05-07-2017 IPR002656 Acyltransferase 3 GO:0016747 AC028_RS15825 20f3836b12bf21ca1ca1e0d607bd592a 262 Pfam PF13537 Glutamine amidotransferase domain 67 164 4.1E-15 T 05-07-2017 IPR017932 Glutamine amidotransferase type 2 domain AC028_RS15825 20f3836b12bf21ca1ca1e0d607bd592a 262 SUPERFAMILY SSF56235 1 210 2.32E-21 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS15825 20f3836b12bf21ca1ca1e0d607bd592a 262 Gene3D G3DSA:3.60.20.10 1 210 2.5E-25 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS00010 32ccdfb6068820faa33c057518d1a6df 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 84 261 6.2E-51 T 05-07-2017 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AC028_RS00010 32ccdfb6068820faa33c057518d1a6df 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 17 68 1.0E-14 T 05-07-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AC028_RS00010 32ccdfb6068820faa33c057518d1a6df 275 Gene3D G3DSA:3.40.50.150 83 272 6.8E-58 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS00010 32ccdfb6068820faa33c057518d1a6df 275 SUPERFAMILY SSF47757 5 83 7.98E-19 T 05-07-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AC028_RS00010 32ccdfb6068820faa33c057518d1a6df 275 Gene3D G3DSA:1.10.155.10 7 82 1.5E-22 T 05-07-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AC028_RS00010 32ccdfb6068820faa33c057518d1a6df 275 PRINTS PR00996 Glutamate methyltransferase family signature 112 132 7.2E-37 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS00010 32ccdfb6068820faa33c057518d1a6df 275 PRINTS PR00996 Glutamate methyltransferase family signature 77 89 7.2E-37 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS00010 32ccdfb6068820faa33c057518d1a6df 275 PRINTS PR00996 Glutamate methyltransferase family signature 215 229 7.2E-37 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS00010 32ccdfb6068820faa33c057518d1a6df 275 PRINTS PR00996 Glutamate methyltransferase family signature 234 257 7.2E-37 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS00010 32ccdfb6068820faa33c057518d1a6df 275 PRINTS PR00996 Glutamate methyltransferase family signature 38 51 7.2E-37 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS00010 32ccdfb6068820faa33c057518d1a6df 275 PRINTS PR00996 Glutamate methyltransferase family signature 144 160 7.2E-37 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS00010 32ccdfb6068820faa33c057518d1a6df 275 SMART SM00138 16 275 1.3E-79 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS00010 32ccdfb6068820faa33c057518d1a6df 275 SUPERFAMILY SSF53335 84 270 3.19E-49 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS00010 32ccdfb6068820faa33c057518d1a6df 275 PIRSF PIRSF000410 2 275 3.9E-89 T 05-07-2017 IPR026024 Chemotaxis protein methyltransferase CheR AC028_RS08930 4857ff064a91b0f048d1746207a24bf8 210 Pfam PF00072 Response regulator receiver domain 6 117 3.3E-29 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS08930 4857ff064a91b0f048d1746207a24bf8 210 Gene3D G3DSA:3.40.50.2300 2 121 3.0E-35 T 05-07-2017 AC028_RS08930 4857ff064a91b0f048d1746207a24bf8 210 SMART SM00448 4 116 5.9E-32 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS08930 4857ff064a91b0f048d1746207a24bf8 210 Gene3D G3DSA:1.10.10.10 122 209 3.4E-25 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS08930 4857ff064a91b0f048d1746207a24bf8 210 SUPERFAMILY SSF52172 1 178 1.25E-34 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS08930 4857ff064a91b0f048d1746207a24bf8 210 SMART SM00421 147 204 3.5E-22 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS08930 4857ff064a91b0f048d1746207a24bf8 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.0E-11 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS08930 4857ff064a91b0f048d1746207a24bf8 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.0E-11 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS08930 4857ff064a91b0f048d1746207a24bf8 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.0E-11 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS08930 4857ff064a91b0f048d1746207a24bf8 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 6.7E-18 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS09170 714ad53aed76d90391e512021f0e189c 360 Pfam PF00356 Bacterial regulatory proteins, lacI family 21 66 3.0E-19 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS09170 714ad53aed76d90391e512021f0e189c 360 Gene3D G3DSA:1.10.260.40 20 71 1.6E-22 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS09170 714ad53aed76d90391e512021f0e189c 360 Gene3D G3DSA:3.40.50.2300 192 328 5.8E-53 T 05-07-2017 AC028_RS09170 714ad53aed76d90391e512021f0e189c 360 ProSitePatterns PS00356 LacI-type HTH domain signature. 22 40 - T 05-07-2017 AC028_RS09170 714ad53aed76d90391e512021f0e189c 360 SMART SM00354 19 89 1.7E-26 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS09170 714ad53aed76d90391e512021f0e189c 360 Gene3D G3DSA:3.40.50.2300 72 191 3.3E-28 T 05-07-2017 AC028_RS09170 714ad53aed76d90391e512021f0e189c 360 SUPERFAMILY SSF47413 19 77 7.67E-17 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS09170 714ad53aed76d90391e512021f0e189c 360 Pfam PF13377 Periplasmic binding protein-like domain 187 350 2.0E-38 T 05-07-2017 AC028_RS09170 714ad53aed76d90391e512021f0e189c 360 SUPERFAMILY SSF53822 80 354 9.93E-68 T 05-07-2017 IPR028082 Periplasmic binding protein-like I AC028_RS22275 87d4b189f0016167a2d6ffc45accd5d5 210 Gene3D G3DSA:3.40.50.300 4 200 1.5E-27 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS22275 87d4b189f0016167a2d6ffc45accd5d5 210 SUPERFAMILY SSF52540 1 186 3.53E-32 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS22275 87d4b189f0016167a2d6ffc45accd5d5 210 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 159 3.6E-16 T 05-07-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AC028_RS22275 87d4b189f0016167a2d6ffc45accd5d5 210 PIRSF PIRSF009320 2 209 1.5E-29 T 05-07-2017 AC028_RS15900 3070b67719025dc72cb08933937e11f9 164 Pfam PF08281 Sigma-70, region 4 109 155 5.3E-12 T 05-07-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS15900 3070b67719025dc72cb08933937e11f9 164 Gene3D G3DSA:1.10.1740.10 4 76 1.4E-10 T 05-07-2017 AC028_RS15900 3070b67719025dc72cb08933937e11f9 164 Pfam PF04542 Sigma-70 region 2 11 76 7.1E-12 T 05-07-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS15900 3070b67719025dc72cb08933937e11f9 164 Gene3D G3DSA:1.10.10.10 108 155 1.5E-10 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS15900 3070b67719025dc72cb08933937e11f9 164 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 155 1.2E-16 T 05-07-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS15900 3070b67719025dc72cb08933937e11f9 164 SUPERFAMILY SSF88946 5 96 1.41E-13 T 05-07-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS15900 3070b67719025dc72cb08933937e11f9 164 SUPERFAMILY SSF88659 100 160 8.11E-12 T 05-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS08560 f7a5dba717eb8b359a1a3f4469c83125 385 SUPERFAMILY SSF46785 25 85 7.72E-8 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS08560 f7a5dba717eb8b359a1a3f4469c83125 385 Gene3D G3DSA:1.10.10.10 24 88 5.0E-10 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS08560 f7a5dba717eb8b359a1a3f4469c83125 385 SUPERFAMILY SSF53067 94 381 5.41E-26 T 05-07-2017 AC028_RS08560 f7a5dba717eb8b359a1a3f4469c83125 385 Pfam PF00480 ROK family 97 260 2.4E-18 T 05-07-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AC028_RS08560 f7a5dba717eb8b359a1a3f4469c83125 385 Gene3D G3DSA:3.30.420.40 234 344 1.2E-12 T 05-07-2017 AC028_RS08560 f7a5dba717eb8b359a1a3f4469c83125 385 Gene3D G3DSA:3.30.420.40 90 233 7.3E-27 T 05-07-2017 AC028_RS11165 666641fed65013dfc1109dbea8e2d447 492 Gene3D G3DSA:2.30.38.10 315 389 2.3E-25 T 05-07-2017 AC028_RS11165 666641fed65013dfc1109dbea8e2d447 492 Pfam PF13193 AMP-binding enzyme C-terminal domain 404 478 3.1E-19 T 05-07-2017 IPR025110 AMP-binding enzyme C-terminal domain AC028_RS11165 666641fed65013dfc1109dbea8e2d447 492 Pfam PF00501 AMP-binding enzyme 28 395 2.7E-81 T 05-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AC028_RS11165 666641fed65013dfc1109dbea8e2d447 492 Gene3D G3DSA:3.30.300.30 390 487 1.7E-30 T 05-07-2017 AC028_RS11165 666641fed65013dfc1109dbea8e2d447 492 SUPERFAMILY SSF56801 6 490 1.05E-131 T 05-07-2017 AC028_RS11165 666641fed65013dfc1109dbea8e2d447 492 ProSitePatterns PS00455 Putative AMP-binding domain signature. 146 157 - T 05-07-2017 IPR020845 AMP-binding, conserved site AC028_RS11165 666641fed65013dfc1109dbea8e2d447 492 Gene3D G3DSA:3.40.50.980 8 153 1.2E-27 T 05-07-2017 AC028_RS11165 666641fed65013dfc1109dbea8e2d447 492 Gene3D G3DSA:3.40.50.980 154 298 4.4E-28 T 05-07-2017 AC028_RS09910 ccd8d51f33135419f2e78eefb942c268 166 Pfam PF13673 Acetyltransferase (GNAT) domain 81 155 2.9E-12 T 05-07-2017 IPR000182 GNAT domain GO:0008080 AC028_RS09910 ccd8d51f33135419f2e78eefb942c268 166 Gene3D G3DSA:3.40.630.30 10 156 5.9E-43 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS09910 ccd8d51f33135419f2e78eefb942c268 166 SUPERFAMILY SSF55729 10 159 5.67E-33 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS01055 ccf65af57348d62e58aa8d390193031e 886 Pfam PF07691 PA14 domain 456 607 3.3E-30 T 05-07-2017 IPR011658 PA14 domain AC028_RS01055 ccf65af57348d62e58aa8d390193031e 886 SUPERFAMILY SSF51445 31 372 4.84E-92 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS01055 ccf65af57348d62e58aa8d390193031e 886 SUPERFAMILY SSF52279 373 440 2.88E-52 T 05-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AC028_RS01055 ccf65af57348d62e58aa8d390193031e 886 SUPERFAMILY SSF52279 608 762 2.88E-52 T 05-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AC028_RS01055 ccf65af57348d62e58aa8d390193031e 886 SUPERFAMILY SSF56988 459 636 3.79E-23 T 05-07-2017 AC028_RS01055 ccf65af57348d62e58aa8d390193031e 886 SMART SM01217 796 864 1.3E-26 T 05-07-2017 IPR026891 Fibronectin type III-like domain AC028_RS01055 ccf65af57348d62e58aa8d390193031e 886 PRINTS PR00133 Glycosyl hydrolase family 3 signature 88 107 9.7E-10 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS01055 ccf65af57348d62e58aa8d390193031e 886 PRINTS PR00133 Glycosyl hydrolase family 3 signature 184 200 9.7E-10 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS01055 ccf65af57348d62e58aa8d390193031e 886 PRINTS PR00133 Glycosyl hydrolase family 3 signature 255 273 9.7E-10 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS01055 ccf65af57348d62e58aa8d390193031e 886 Gene3D G3DSA:3.20.20.300 31 347 1.6E-103 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS01055 ccf65af57348d62e58aa8d390193031e 886 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 49 330 1.6E-43 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS01055 ccf65af57348d62e58aa8d390193031e 886 Gene3D G3DSA:3.40.50.1700 359 439 7.7E-74 T 05-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AC028_RS01055 ccf65af57348d62e58aa8d390193031e 886 Gene3D G3DSA:3.40.50.1700 608 762 7.7E-74 T 05-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AC028_RS01055 ccf65af57348d62e58aa8d390193031e 886 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 373 759 7.9E-61 T 05-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AC028_RS01055 ccf65af57348d62e58aa8d390193031e 886 SMART SM00758 456 610 1.7E-24 T 05-07-2017 IPR011658 PA14 domain AC028_RS01055 ccf65af57348d62e58aa8d390193031e 886 Pfam PF14310 Fibronectin type III-like domain 796 862 1.4E-19 T 05-07-2017 IPR026891 Fibronectin type III-like domain AC028_RS11125 d9f010e70091b063567b54efd61ce0d7 393 Gene3D G3DSA:3.50.50.60 9 183 1.4E-43 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS11125 d9f010e70091b063567b54efd61ce0d7 393 Gene3D G3DSA:3.50.50.60 269 354 1.4E-43 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS11125 d9f010e70091b063567b54efd61ce0d7 393 Pfam PF01494 FAD binding domain 8 322 1.9E-27 T 05-07-2017 IPR002938 FAD-binding domain GO:0071949 AC028_RS11125 d9f010e70091b063567b54efd61ce0d7 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 1.2E-18 T 05-07-2017 AC028_RS11125 d9f010e70091b063567b54efd61ce0d7 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.2E-18 T 05-07-2017 AC028_RS11125 d9f010e70091b063567b54efd61ce0d7 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.2E-18 T 05-07-2017 AC028_RS11125 d9f010e70091b063567b54efd61ce0d7 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 1.2E-18 T 05-07-2017 AC028_RS11125 d9f010e70091b063567b54efd61ce0d7 393 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 05-07-2017 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AC028_RS11125 d9f010e70091b063567b54efd61ce0d7 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 9 391 9.6E-132 T 05-07-2017 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AC028_RS11125 d9f010e70091b063567b54efd61ce0d7 393 SUPERFAMILY SSF51905 9 178 4.48E-55 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS11125 d9f010e70091b063567b54efd61ce0d7 393 SUPERFAMILY SSF51905 268 386 4.48E-55 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19070 2ec803924edc1c710d7d116550b8ab3f 1169 SUPERFAMILY SSF82866 918 1140 6.8E-51 T 05-07-2017 AC028_RS19070 2ec803924edc1c710d7d116550b8ab3f 1169 SUPERFAMILY SSF82714 211 277 9.68E-11 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS19070 2ec803924edc1c710d7d116550b8ab3f 1169 SUPERFAMILY SSF82714 833 916 1.44E-12 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS19070 2ec803924edc1c710d7d116550b8ab3f 1169 Gene3D G3DSA:3.30.70.1430 62 159 5.2E-25 T 05-07-2017 AC028_RS19070 2ec803924edc1c710d7d116550b8ab3f 1169 Gene3D G3DSA:3.30.70.1430 689 750 1.2E-4 T 05-07-2017 AC028_RS19070 2ec803924edc1c710d7d116550b8ab3f 1169 Pfam PF00873 AcrB/AcrD/AcrF family 296 560 2.4E-77 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS19070 2ec803924edc1c710d7d116550b8ab3f 1169 Pfam PF00873 AcrB/AcrD/AcrF family 25 278 5.7E-56 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS19070 2ec803924edc1c710d7d116550b8ab3f 1169 Pfam PF00873 AcrB/AcrD/AcrF family 636 1137 2.9E-116 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS19070 2ec803924edc1c710d7d116550b8ab3f 1169 Gene3D G3DSA:1.10.3850.10 924 1140 4.0E-60 T 05-07-2017 AC028_RS19070 2ec803924edc1c710d7d116550b8ab3f 1169 Gene3D G3DSA:3.30.2090.10 211 277 3.4E-15 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS19070 2ec803924edc1c710d7d116550b8ab3f 1169 Gene3D G3DSA:3.30.2090.10 323 338 3.4E-15 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS19070 2ec803924edc1c710d7d116550b8ab3f 1169 Gene3D G3DSA:3.30.2090.10 833 915 2.6E-13 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS19070 2ec803924edc1c710d7d116550b8ab3f 1169 SUPERFAMILY SSF82866 362 560 1.57E-44 T 05-07-2017 AC028_RS19070 2ec803924edc1c710d7d116550b8ab3f 1169 PRINTS PR00702 Acriflavin resistance protein family signature 31 55 3.4E-24 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS19070 2ec803924edc1c710d7d116550b8ab3f 1169 PRINTS PR00702 Acriflavin resistance protein family signature 535 558 3.4E-24 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS19070 2ec803924edc1c710d7d116550b8ab3f 1169 PRINTS PR00702 Acriflavin resistance protein family signature 59 77 3.4E-24 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS19070 2ec803924edc1c710d7d116550b8ab3f 1169 PRINTS PR00702 Acriflavin resistance protein family signature 510 533 3.4E-24 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS19070 2ec803924edc1c710d7d116550b8ab3f 1169 SUPERFAMILY SSF82693 62 153 6.8E-19 T 05-07-2017 AC028_RS19070 2ec803924edc1c710d7d116550b8ab3f 1169 Gene3D G3DSA:1.20.1640.10 357 561 6.3E-57 T 05-07-2017 AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 Pfam PF00512 His Kinase A (phospho-acceptor) domain 810 875 4.6E-17 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 Gene3D G3DSA:2.120.10.30 305 416 1.7E-4 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 Gene3D G3DSA:2.120.10.30 417 615 1.6E-18 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 SMART SM00388 810 875 6.9E-22 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 922 1034 2.6E-25 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 SUPERFAMILY SSF55874 864 1036 2.62E-44 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 Pfam PF07495 Y_Y_Y domain 694 755 2.0E-15 T 05-07-2017 IPR011123 Two component regulator three Y AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 SMART SM00448 1057 1168 1.9E-29 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 SUPERFAMILY SSF63829 31 232 5.01E-23 T 05-07-2017 AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 SUPERFAMILY SSF47384 800 876 1.02E-17 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 Pfam PF00072 Response regulator receiver domain 1059 1168 3.7E-20 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 PRINTS PR00344 Bacterial sensor protein C-terminal signature 960 974 8.9E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 PRINTS PR00344 Bacterial sensor protein C-terminal signature 996 1014 8.9E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1020 1033 8.9E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 PRINTS PR00344 Bacterial sensor protein C-terminal signature 978 988 8.9E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 Gene3D G3DSA:3.30.565.10 876 1035 2.7E-46 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 SUPERFAMILY SSF52172 1055 1179 1.27E-32 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 SMART SM00387 922 1036 5.8E-36 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 Gene3D G3DSA:2.120.10.30 35 232 2.3E-16 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 Pfam PF07494 Two component regulator propeller 31 53 0.0025 T 05-07-2017 IPR011110 Two component regulator propeller AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 Pfam PF07494 Two component regulator propeller 165 188 0.0091 T 05-07-2017 IPR011110 Two component regulator propeller AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 SUPERFAMILY SSF63829 410 617 7.46E-27 T 05-07-2017 AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 Gene3D G3DSA:3.40.50.2300 1053 1177 3.3E-31 T 05-07-2017 AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 Gene3D G3DSA:1.10.287.130 804 871 8.9E-14 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS00805 a8f27c35907e062626d6e6e919ce6ea3 1181 SUPERFAMILY SSF63829 305 480 4.12E-9 T 05-07-2017 AC028_RS12215 626718350b47c74d61aa414f38f6f7f3 197 SUPERFAMILY SSF111304 3 195 7.32E-70 T 05-07-2017 IPR023627 Recombination protein RecR AC028_RS12215 626718350b47c74d61aa414f38f6f7f3 197 Pfam PF13662 Toprim domain 79 169 6.4E-22 T 05-07-2017 IPR006171 Toprim domain AC028_RS12215 626718350b47c74d61aa414f38f6f7f3 197 Hamap MF_00017 Recombination protein RecR [recR]. 1 196 95.703 T 05-07-2017 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AC028_RS12215 626718350b47c74d61aa414f38f6f7f3 197 Pfam PF02132 RecR protein 38 76 1.1E-13 T 05-07-2017 IPR023628 Recombination protein RecR, C4-type zinc finger AC028_RS12215 626718350b47c74d61aa414f38f6f7f3 197 SMART SM00493 78 163 9.9E-11 T 05-07-2017 IPR006171 Toprim domain AC028_RS12215 626718350b47c74d61aa414f38f6f7f3 197 TIGRFAM TIGR00615 recR: recombination protein RecR 2 193 1.9E-71 T 05-07-2017 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AC028_RS12215 626718350b47c74d61aa414f38f6f7f3 197 ProSitePatterns PS01300 RecR protein signature. 55 76 - T 05-07-2017 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 AC028_RS18190 c2dfb72eb9fad37cdcbce26c30cf048c 685 Gene3D G3DSA:1.10.287.950 428 632 3.9E-62 T 05-07-2017 AC028_RS18190 c2dfb72eb9fad37cdcbce26c30cf048c 685 SMART SM01049 3 98 4.1E-31 T 05-07-2017 IPR033480 Single Cache domain 2 AC028_RS18190 c2dfb72eb9fad37cdcbce26c30cf048c 685 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 540 569 1.7E-57 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18190 c2dfb72eb9fad37cdcbce26c30cf048c 685 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 588 617 1.7E-57 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18190 c2dfb72eb9fad37cdcbce26c30cf048c 685 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 511 538 1.7E-57 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18190 c2dfb72eb9fad37cdcbce26c30cf048c 685 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 434 463 1.7E-57 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18190 c2dfb72eb9fad37cdcbce26c30cf048c 685 SMART SM00283 413 660 9.7E-90 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18190 c2dfb72eb9fad37cdcbce26c30cf048c 685 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 465 659 1.4E-63 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18190 c2dfb72eb9fad37cdcbce26c30cf048c 685 SMART SM00304 360 412 32.0 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18190 c2dfb72eb9fad37cdcbce26c30cf048c 685 SMART SM00304 180 232 2.0E-5 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18190 c2dfb72eb9fad37cdcbce26c30cf048c 685 Pfam PF00672 HAMP domain 161 229 2.2E-11 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18190 c2dfb72eb9fad37cdcbce26c30cf048c 685 SUPERFAMILY SSF58104 380 663 1.7E-72 T 05-07-2017 AC028_RS18190 c2dfb72eb9fad37cdcbce26c30cf048c 685 Gene3D G3DSA:3.30.450.20 5 148 3.3E-47 T 05-07-2017 AC028_RS18190 c2dfb72eb9fad37cdcbce26c30cf048c 685 SUPERFAMILY SSF158472 181 229 2.88E-7 T 05-07-2017 AC028_RS18190 c2dfb72eb9fad37cdcbce26c30cf048c 685 Pfam PF17200 Single Cache domain 2 6 153 1.0E-42 T 05-07-2017 IPR033480 Single Cache domain 2 AC028_RS09130 d6986a774dcc8a1d9c774699948c5f12 321 Gene3D G3DSA:3.40.50.1400 8 203 1.0E-63 T 05-07-2017 AC028_RS09130 d6986a774dcc8a1d9c774699948c5f12 321 TIGRFAM TIGR00109 hemH: ferrochelatase 8 317 1.2E-86 T 05-07-2017 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AC028_RS09130 d6986a774dcc8a1d9c774699948c5f12 321 Pfam PF00762 Ferrochelatase 10 320 1.6E-100 T 05-07-2017 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AC028_RS09130 d6986a774dcc8a1d9c774699948c5f12 321 Hamap MF_00323 Ferrochelatase [hemH]. 8 321 33.448 T 05-07-2017 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AC028_RS09130 d6986a774dcc8a1d9c774699948c5f12 321 ProSitePatterns PS00534 Ferrochelatase signature. 192 210 - T 05-07-2017 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AC028_RS09130 d6986a774dcc8a1d9c774699948c5f12 321 SUPERFAMILY SSF53800 8 320 7.59E-94 T 05-07-2017 AC028_RS09130 d6986a774dcc8a1d9c774699948c5f12 321 Gene3D G3DSA:3.40.50.1400 204 319 1.7E-29 T 05-07-2017 AC028_RS13375 1b7f7d709439519936091f869217ed46 295 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 2.2E-51 T 05-07-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AC028_RS13375 1b7f7d709439519936091f869217ed46 295 Gene3D G3DSA:1.10.1040.10 164 294 1.1E-42 T 05-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AC028_RS13375 1b7f7d709439519936091f869217ed46 295 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 291 2.2E-33 T 05-07-2017 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AC028_RS13375 1b7f7d709439519936091f869217ed46 295 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 05-07-2017 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AC028_RS13375 1b7f7d709439519936091f869217ed46 295 PIRSF PIRSF000103 1 295 3.5E-81 T 05-07-2017 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AC028_RS13375 1b7f7d709439519936091f869217ed46 295 Gene3D G3DSA:3.40.50.720 2 163 2.9E-60 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS13375 1b7f7d709439519936091f869217ed46 295 SUPERFAMILY SSF48179 163 293 6.35E-39 T 05-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AC028_RS13375 1b7f7d709439519936091f869217ed46 295 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 292 1.2E-121 T 05-07-2017 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 AC028_RS13375 1b7f7d709439519936091f869217ed46 295 SUPERFAMILY SSF51735 1 162 5.73E-47 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS03960 a08553c2a1fed110ee7dd5d49b8c6b42 601 TIGRFAM TIGR01393 lepA: elongation factor 4 8 600 2.5E-293 T 05-07-2017 IPR006297 Elongation factor 4 GO:0005525 AC028_RS03960 a08553c2a1fed110ee7dd5d49b8c6b42 601 SUPERFAMILY SSF52540 5 228 1.86E-54 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS03960 a08553c2a1fed110ee7dd5d49b8c6b42 601 Gene3D G3DSA:3.40.50.300 4 198 3.2E-58 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS03960 a08553c2a1fed110ee7dd5d49b8c6b42 601 SMART SM00838 403 491 0.0041 T 05-07-2017 IPR000640 Translation elongation factor EFG, V domain AC028_RS03960 a08553c2a1fed110ee7dd5d49b8c6b42 601 Pfam PF00009 Elongation factor Tu GTP binding domain 8 186 1.2E-51 T 05-07-2017 AC028_RS03960 a08553c2a1fed110ee7dd5d49b8c6b42 601 SUPERFAMILY SSF54980 297 375 6.47E-19 T 05-07-2017 IPR009022 Elongation factor G, III-V domain AC028_RS03960 a08553c2a1fed110ee7dd5d49b8c6b42 601 Pfam PF03144 Elongation factor Tu domain 2 210 280 1.2E-9 T 05-07-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AC028_RS03960 a08553c2a1fed110ee7dd5d49b8c6b42 601 Gene3D G3DSA:3.30.70.870 297 374 3.9E-26 T 05-07-2017 AC028_RS03960 a08553c2a1fed110ee7dd5d49b8c6b42 601 Hamap MF_00071 Elongation factor 4 [lepA]. 1 601 295.291 T 05-07-2017 IPR006297 Elongation factor 4 GO:0005525 AC028_RS03960 a08553c2a1fed110ee7dd5d49b8c6b42 601 Pfam PF06421 GTP-binding protein LepA C-terminus 492 598 2.1E-51 T 05-07-2017 IPR013842 GTP-binding protein LepA, C-terminal AC028_RS03960 a08553c2a1fed110ee7dd5d49b8c6b42 601 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 47 62 - T 05-07-2017 IPR031157 Tr-type G domain, conserved site AC028_RS03960 a08553c2a1fed110ee7dd5d49b8c6b42 601 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 177 5.5E-17 T 05-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AC028_RS03960 a08553c2a1fed110ee7dd5d49b8c6b42 601 Pfam PF00679 Elongation factor G C-terminus 404 482 1.3E-18 T 05-07-2017 IPR000640 Translation elongation factor EFG, V domain AC028_RS03960 a08553c2a1fed110ee7dd5d49b8c6b42 601 Gene3D G3DSA:2.40.30.10 199 295 1.3E-22 T 05-07-2017 AC028_RS03960 a08553c2a1fed110ee7dd5d49b8c6b42 601 PRINTS PR00315 GTP-binding elongation factor signature 11 24 3.1E-14 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS03960 a08553c2a1fed110ee7dd5d49b8c6b42 601 PRINTS PR00315 GTP-binding elongation factor signature 95 106 3.1E-14 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS03960 a08553c2a1fed110ee7dd5d49b8c6b42 601 PRINTS PR00315 GTP-binding elongation factor signature 79 89 3.1E-14 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS03960 a08553c2a1fed110ee7dd5d49b8c6b42 601 PRINTS PR00315 GTP-binding elongation factor signature 54 62 3.1E-14 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS03960 a08553c2a1fed110ee7dd5d49b8c6b42 601 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.1E-14 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS03960 a08553c2a1fed110ee7dd5d49b8c6b42 601 SUPERFAMILY SSF54980 404 498 1.63E-23 T 05-07-2017 IPR009022 Elongation factor G, III-V domain AC028_RS03960 a08553c2a1fed110ee7dd5d49b8c6b42 601 Gene3D G3DSA:3.30.70.240 406 494 1.0E-19 T 05-07-2017 IPR000640 Translation elongation factor EFG, V domain AC028_RS17415 f833753b5473780d013ab3b9375a4118 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.1E-16 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS17415 f833753b5473780d013ab3b9375a4118 314 Gene3D G3DSA:3.40.190.10 184 256 2.8E-8 T 05-07-2017 AC028_RS17415 f833753b5473780d013ab3b9375a4118 314 Gene3D G3DSA:3.40.190.10 97 183 1.8E-5 T 05-07-2017 AC028_RS17415 f833753b5473780d013ab3b9375a4118 314 Pfam PF03466 LysR substrate binding domain 90 289 1.4E-21 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS17415 f833753b5473780d013ab3b9375a4118 314 SUPERFAMILY SSF46785 4 88 1.13E-16 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS17415 f833753b5473780d013ab3b9375a4118 314 SUPERFAMILY SSF53850 90 290 1.1E-26 T 05-07-2017 AC028_RS17415 f833753b5473780d013ab3b9375a4118 314 Gene3D G3DSA:1.10.10.10 3 88 8.9E-21 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS09810 36e968114464a7177590667cc7caded5 350 Pfam PF06580 Histidine kinase 159 237 5.3E-21 T 05-07-2017 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AC028_RS09810 36e968114464a7177590667cc7caded5 350 Gene3D G3DSA:3.30.565.10 247 294 7.9E-5 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS09810 36e968114464a7177590667cc7caded5 350 SUPERFAMILY SSF55874 217 297 8.78E-7 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS12790 b4b49cac8e57bfd210cc6308e7e3603c 702 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 373 381 - T 05-07-2017 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS12790 b4b49cac8e57bfd210cc6308e7e3603c 702 PIRSF PIRSF038927 17 700 2.5E-295 T 05-07-2017 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AC028_RS12790 b4b49cac8e57bfd210cc6308e7e3603c 702 ProSitePatterns PS00438 Catalase proximal active site signature. 79 95 - T 05-07-2017 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS12790 b4b49cac8e57bfd210cc6308e7e3603c 702 Gene3D G3DSA:3.40.50.880 556 701 1.0E-38 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS12790 b4b49cac8e57bfd210cc6308e7e3603c 702 SMART SM01060 43 431 7.7E-278 T 05-07-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS12790 b4b49cac8e57bfd210cc6308e7e3603c 702 SUPERFAMILY SSF56634 34 531 1.05E-217 T 05-07-2017 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS12790 b4b49cac8e57bfd210cc6308e7e3603c 702 PRINTS PR00067 Catalase signature 328 355 1.1E-68 T 05-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS12790 b4b49cac8e57bfd210cc6308e7e3603c 702 PRINTS PR00067 Catalase signature 56 79 1.1E-68 T 05-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS12790 b4b49cac8e57bfd210cc6308e7e3603c 702 PRINTS PR00067 Catalase signature 360 386 1.1E-68 T 05-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS12790 b4b49cac8e57bfd210cc6308e7e3603c 702 PRINTS PR00067 Catalase signature 140 157 1.1E-68 T 05-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS12790 b4b49cac8e57bfd210cc6308e7e3603c 702 PRINTS PR00067 Catalase signature 119 137 1.1E-68 T 05-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS12790 b4b49cac8e57bfd210cc6308e7e3603c 702 PRINTS PR00067 Catalase signature 159 177 1.1E-68 T 05-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS12790 b4b49cac8e57bfd210cc6308e7e3603c 702 Gene3D G3DSA:2.40.180.10 32 398 6.7E-177 T 05-07-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS12790 b4b49cac8e57bfd210cc6308e7e3603c 702 Pfam PF06628 Catalase-related immune-responsive 457 519 7.1E-22 T 05-07-2017 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS12790 b4b49cac8e57bfd210cc6308e7e3603c 702 Pfam PF00199 Catalase 43 428 5.6E-179 T 05-07-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS12790 b4b49cac8e57bfd210cc6308e7e3603c 702 SUPERFAMILY SSF52317 554 673 3.59E-12 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS07240 f7dcd4d635524d420a72f1db3ed94435 264 Gene3D G3DSA:3.40.50.80 135 257 1.1E-39 T 05-07-2017 AC028_RS07240 f7dcd4d635524d420a72f1db3ed94435 264 Gene3D G3DSA:2.40.30.10 10 131 3.1E-37 T 05-07-2017 AC028_RS07240 f7dcd4d635524d420a72f1db3ed94435 264 Pfam PF04954 Siderophore-interacting protein 140 257 3.3E-35 T 05-07-2017 IPR007037 Siderophore-interacting protein AC028_RS07240 f7dcd4d635524d420a72f1db3ed94435 264 Pfam PF08021 Siderophore-interacting FAD-binding domain 19 132 6.9E-38 T 05-07-2017 IPR013113 FAD-binding 9, siderophore-interacting AC028_RS07240 f7dcd4d635524d420a72f1db3ed94435 264 SUPERFAMILY SSF63380 5 137 4.3E-17 T 05-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AC028_RS22015 e5c0fa83146dc36d38672d2eb0529729 156 Gene3D G3DSA:3.40.1280.10 1 155 1.1E-53 T 05-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AC028_RS22015 e5c0fa83146dc36d38672d2eb0529729 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 6.2E-53 T 05-07-2017 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AC028_RS22015 e5c0fa83146dc36d38672d2eb0529729 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.5E-48 T 05-07-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AC028_RS22015 e5c0fa83146dc36d38672d2eb0529729 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 28.084 T 05-07-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AC028_RS22015 e5c0fa83146dc36d38672d2eb0529729 156 SUPERFAMILY SSF75217 1 153 1.31E-47 T 05-07-2017 IPR029028 Alpha/beta knot methyltransferases AC028_RS22015 e5c0fa83146dc36d38672d2eb0529729 156 PIRSF PIRSF004505 1 155 3.9E-46 T 05-07-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AC028_RS21305 482688967bafa0f2e67ba59a2686ce7d 331 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 2.6E-21 T 05-07-2017 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AC028_RS21305 482688967bafa0f2e67ba59a2686ce7d 331 SUPERFAMILY SSF46589 12 99 1.41E-19 T 05-07-2017 IPR010978 tRNA-binding arm GO:0000166 AC028_RS21305 482688967bafa0f2e67ba59a2686ce7d 331 Gene3D G3DSA:3.30.930.10 9 330 2.4E-127 T 05-07-2017 AC028_RS21305 482688967bafa0f2e67ba59a2686ce7d 331 Pfam PF01409 tRNA synthetases class II core domain (F) 92 330 4.9E-105 T 05-07-2017 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AC028_RS21305 482688967bafa0f2e67ba59a2686ce7d 331 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 330 48.656 T 05-07-2017 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AC028_RS21305 482688967bafa0f2e67ba59a2686ce7d 331 SUPERFAMILY SSF55681 92 330 8.3E-79 T 05-07-2017 AC028_RS21305 482688967bafa0f2e67ba59a2686ce7d 331 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 164 330 2.1E-71 T 05-07-2017 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AC028_RS09245 af747f1aa94c4e51f2947822a53f0748 478 Pfam PF00171 Aldehyde dehydrogenase family 11 443 3.1E-97 T 05-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AC028_RS09245 af747f1aa94c4e51f2947822a53f0748 478 SUPERFAMILY SSF53720 9 446 2.23E-119 T 05-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AC028_RS09245 af747f1aa94c4e51f2947822a53f0748 478 Gene3D G3DSA:3.40.309.10 233 424 3.0E-56 T 05-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AC028_RS09245 af747f1aa94c4e51f2947822a53f0748 478 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 245 256 - T 05-07-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AC028_RS09245 af747f1aa94c4e51f2947822a53f0748 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 217 224 - T 05-07-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AC028_RS09245 af747f1aa94c4e51f2947822a53f0748 478 PIRSF PIRSF036492 3 478 9.5E-156 T 05-07-2017 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 AC028_RS09245 af747f1aa94c4e51f2947822a53f0748 478 Gene3D G3DSA:3.40.605.10 9 232 7.9E-58 T 05-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AC028_RS20795 c04254426ef5c4cf76f92cb5de862d27 1670 Gene3D G3DSA:3.40.50.720 1173 1268 1.3E-36 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS20795 c04254426ef5c4cf76f92cb5de862d27 1670 Gene3D G3DSA:3.40.50.720 1005 1116 1.3E-36 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS20795 c04254426ef5c4cf76f92cb5de862d27 1670 PIRSF PIRSF036761 1 1670 0.0 T 05-07-2017 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AC028_RS20795 c04254426ef5c4cf76f92cb5de862d27 1670 SUPERFAMILY SSF53223 818 1004 1.63E-20 T 05-07-2017 AC028_RS20795 c04254426ef5c4cf76f92cb5de862d27 1670 SUPERFAMILY SSF51735 1148 1276 5.38E-32 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS20795 c04254426ef5c4cf76f92cb5de862d27 1670 SUPERFAMILY SSF51735 1008 1110 5.38E-32 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS20795 c04254426ef5c4cf76f92cb5de862d27 1670 Pfam PF12466 Glutamate dehydrogenase N terminal 1 95 2.8E-43 T 05-07-2017 IPR024727 Bacterial NAD-glutamate dehydrogenase, N-terminal AC028_RS20795 c04254426ef5c4cf76f92cb5de862d27 1670 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 99 1663 0.0 T 05-07-2017 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AC028_RS21905 c3c4cb0a3f58e60d4ead7b2d1c4ad826 249 Pfam PF00877 NlpC/P60 family 139 247 1.4E-29 T 05-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain AC028_RS21905 c3c4cb0a3f58e60d4ead7b2d1c4ad826 249 SUPERFAMILY SSF54001 121 248 4.91E-40 T 05-07-2017 AC028_RS21905 c3c4cb0a3f58e60d4ead7b2d1c4ad826 249 Gene3D G3DSA:3.90.1720.10 119 249 5.4E-45 T 05-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain AC028_RS00200 aedb15611898ec07642902fc72e8d783 292 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 290 3.8E-58 T 05-07-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AC028_RS00200 aedb15611898ec07642902fc72e8d783 292 Gene3D G3DSA:3.10.310.10 2 135 8.0E-39 T 05-07-2017 AC028_RS00200 aedb15611898ec07642902fc72e8d783 292 Gene3D G3DSA:3.10.310.10 136 280 5.5E-42 T 05-07-2017 AC028_RS00200 aedb15611898ec07642902fc72e8d783 292 Pfam PF02567 Phenazine biosynthesis-like protein 9 286 9.4E-55 T 05-07-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AC028_RS00200 aedb15611898ec07642902fc72e8d783 292 SUPERFAMILY SSF54506 3 290 4.89E-71 T 05-07-2017 AC028_RS00200 aedb15611898ec07642902fc72e8d783 292 PIRSF PIRSF016184 1 291 2.8E-97 T 05-07-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AC028_RS09195 0e59bbf734a411d546be2bdd39bbdb52 852 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 389 780 2.1E-59 T 05-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AC028_RS09195 0e59bbf734a411d546be2bdd39bbdb52 852 SUPERFAMILY SSF52279 389 457 8.76E-54 T 05-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AC028_RS09195 0e59bbf734a411d546be2bdd39bbdb52 852 SUPERFAMILY SSF52279 629 783 8.76E-54 T 05-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AC028_RS09195 0e59bbf734a411d546be2bdd39bbdb52 852 Pfam PF14310 Fibronectin type III-like domain 817 851 2.6E-6 T 05-07-2017 IPR026891 Fibronectin type III-like domain AC028_RS09195 0e59bbf734a411d546be2bdd39bbdb52 852 Gene3D G3DSA:3.20.20.300 33 359 1.4E-109 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS09195 0e59bbf734a411d546be2bdd39bbdb52 852 SUPERFAMILY SSF51445 33 388 3.9E-95 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS09195 0e59bbf734a411d546be2bdd39bbdb52 852 Gene3D G3DSA:3.40.50.1700 375 458 3.1E-75 T 05-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AC028_RS09195 0e59bbf734a411d546be2bdd39bbdb52 852 Gene3D G3DSA:3.40.50.1700 629 783 3.1E-75 T 05-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AC028_RS09195 0e59bbf734a411d546be2bdd39bbdb52 852 SMART SM00758 481 630 1.8E-31 T 05-07-2017 IPR011658 PA14 domain AC028_RS09195 0e59bbf734a411d546be2bdd39bbdb52 852 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 58 346 2.4E-49 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS09195 0e59bbf734a411d546be2bdd39bbdb52 852 PRINTS PR00133 Glycosyl hydrolase family 3 signature 96 115 4.1E-8 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS09195 0e59bbf734a411d546be2bdd39bbdb52 852 PRINTS PR00133 Glycosyl hydrolase family 3 signature 271 289 4.1E-8 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS09195 0e59bbf734a411d546be2bdd39bbdb52 852 Pfam PF07691 PA14 domain 483 627 5.9E-31 T 05-07-2017 IPR011658 PA14 domain AC028_RS09195 0e59bbf734a411d546be2bdd39bbdb52 852 SUPERFAMILY SSF56988 482 712 1.96E-49 T 05-07-2017 AC028_RS03510 f8c3cb23fc7683539738c850e05a3ae1 300 SUPERFAMILY SSF53335 260 290 2.74E-10 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS03510 f8c3cb23fc7683539738c850e05a3ae1 300 SUPERFAMILY SSF53335 41 232 2.74E-10 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS03510 f8c3cb23fc7683539738c850e05a3ae1 300 Gene3D G3DSA:3.40.50.150 79 137 5.6E-4 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS01835 7e86fdbb1ed3db2b594dcd1018240c6c 123 SUPERFAMILY SSF52980 8 112 5.31E-19 T 05-07-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AC028_RS01835 7e86fdbb1ed3db2b594dcd1018240c6c 123 Pfam PF04480 Protein of unknown function (DUF559) 8 110 8.9E-39 T 05-07-2017 IPR007569 Domain of unknown function DUF559 AC028_RS00350 326e1f498e23b6a1c02bbca2ea123891 228 SMART SM00702 1 179 1.3E-22 T 05-07-2017 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AC028_RS00350 326e1f498e23b6a1c02bbca2ea123891 228 SUPERFAMILY SSF51197 5 179 9.61E-6 T 05-07-2017 AC028_RS00350 326e1f498e23b6a1c02bbca2ea123891 228 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 228 46.969 T 05-07-2017 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 AC028_RS00350 326e1f498e23b6a1c02bbca2ea123891 228 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 178 3.5E-14 T 05-07-2017 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AC028_RS00885 6280a48d449c617c7e17d1992840284e 343 Pfam PF00561 alpha/beta hydrolase fold 60 324 6.5E-17 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS00885 6280a48d449c617c7e17d1992840284e 343 PIRSF PIRSF000443 1 342 4.6E-72 T 05-07-2017 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 AC028_RS00885 6280a48d449c617c7e17d1992840284e 343 Gene3D G3DSA:3.40.50.1820 45 336 1.2E-29 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS00885 6280a48d449c617c7e17d1992840284e 343 SUPERFAMILY SSF53474 44 336 5.52E-49 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS16365 a6eaa1f2304fad31f729f6c844171cce 449 Gene3D G3DSA:3.40.50.720 1 206 5.7E-79 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS16365 a6eaa1f2304fad31f729f6c844171cce 449 Gene3D G3DSA:1.20.5.100 207 234 4.5E-19 T 05-07-2017 AC028_RS16365 a6eaa1f2304fad31f729f6c844171cce 449 Gene3D G3DSA:3.40.50.720 235 445 2.2E-73 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS16365 a6eaa1f2304fad31f729f6c844171cce 449 PIRSF PIRSF000124 1 443 2.2E-151 T 05-07-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AC028_RS16365 a6eaa1f2304fad31f729f6c844171cce 449 PIRSF PIRSF500134 1 446 2.3E-187 T 05-07-2017 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346 AC028_RS16365 a6eaa1f2304fad31f729f6c844171cce 449 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 428 4.7E-33 T 05-07-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AC028_RS16365 a6eaa1f2304fad31f729f6c844171cce 449 SUPERFAMILY SSF48179 204 298 1.28E-32 T 05-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AC028_RS16365 a6eaa1f2304fad31f729f6c844171cce 449 SUPERFAMILY SSF51735 1 194 1.87E-59 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS16365 a6eaa1f2304fad31f729f6c844171cce 449 SUPERFAMILY SSF52413 316 439 2.09E-39 T 05-07-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AC028_RS16365 a6eaa1f2304fad31f729f6c844171cce 449 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 1.1E-69 T 05-07-2017 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AC028_RS16365 a6eaa1f2304fad31f729f6c844171cce 449 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 424 2.9E-139 T 05-07-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AC028_RS16365 a6eaa1f2304fad31f729f6c844171cce 449 SMART SM00984 324 428 3.8E-53 T 05-07-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AC028_RS16365 a6eaa1f2304fad31f729f6c844171cce 449 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 6.1E-38 T 05-07-2017 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AC028_RS18220 67273cc41d9556081010186ff9eb4c59 102 Gene3D G3DSA:3.30.750.24 3 88 2.4E-8 T 05-07-2017 IPR002645 STAS domain AC028_RS18220 67273cc41d9556081010186ff9eb4c59 102 SUPERFAMILY SSF52091 3 88 1.45E-10 T 05-07-2017 IPR002645 STAS domain AC028_RS18220 67273cc41d9556081010186ff9eb4c59 102 Pfam PF13466 STAS domain 4 82 1.9E-13 T 05-07-2017 IPR002645 STAS domain AC028_RS02610 220a7302428003d6b062c3d0c2bc353d 444 Gene3D G3DSA:3.90.230.10 184 434 1.0E-81 T 05-07-2017 IPR000994 Peptidase M24, structural domain AC028_RS02610 220a7302428003d6b062c3d0c2bc353d 444 Pfam PF00557 Metallopeptidase family M24 186 417 2.4E-61 T 05-07-2017 IPR000994 Peptidase M24, structural domain AC028_RS02610 220a7302428003d6b062c3d0c2bc353d 444 PRINTS PR00599 Methionine aminopeptidase-1 signature 375 387 1.9E-5 T 05-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase AC028_RS02610 220a7302428003d6b062c3d0c2bc353d 444 PRINTS PR00599 Methionine aminopeptidase-1 signature 257 273 1.9E-5 T 05-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase AC028_RS02610 220a7302428003d6b062c3d0c2bc353d 444 SUPERFAMILY SSF53092 6 179 1.1E-56 T 05-07-2017 IPR028980 Creatinase/Aminopeptidase P, N-terminal AC028_RS02610 220a7302428003d6b062c3d0c2bc353d 444 Pfam PF05195 Aminopeptidase P, N-terminal domain 12 131 1.5E-39 T 05-07-2017 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AC028_RS02610 220a7302428003d6b062c3d0c2bc353d 444 Gene3D G3DSA:3.40.350.10 6 183 5.4E-57 T 05-07-2017 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AC028_RS02610 220a7302428003d6b062c3d0c2bc353d 444 SUPERFAMILY SSF55920 180 439 1.7E-80 T 05-07-2017 IPR000994 Peptidase M24, structural domain AC028_RS02610 220a7302428003d6b062c3d0c2bc353d 444 SMART SM01011 7 141 3.8E-67 T 05-07-2017 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AC028_RS20630 34565d30c2bf7c4716be9b687af86ee3 377 SMART SM00382 44 232 5.9E-18 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS20630 34565d30c2bf7c4716be9b687af86ee3 377 Pfam PF08402 TOBE domain 296 375 4.6E-20 T 05-07-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AC028_RS20630 34565d30c2bf7c4716be9b687af86ee3 377 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS20630 34565d30c2bf7c4716be9b687af86ee3 377 Pfam PF00005 ABC transporter 36 177 1.7E-35 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS20630 34565d30c2bf7c4716be9b687af86ee3 377 Gene3D G3DSA:3.40.50.300 16 255 6.8E-80 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS20630 34565d30c2bf7c4716be9b687af86ee3 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 375 1.7E-124 T 05-07-2017 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AC028_RS20630 34565d30c2bf7c4716be9b687af86ee3 377 SUPERFAMILY SSF50331 253 375 6.38E-15 T 05-07-2017 IPR008995 Molybdate/tungstate binding, C-terminal AC028_RS20630 34565d30c2bf7c4716be9b687af86ee3 377 SUPERFAMILY SSF52540 20 257 1.09E-85 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11910 0e0eda59ecbffa3c3569b2641dca43a9 340 Gene3D G3DSA:3.40.50.720 173 286 1.2E-30 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS11910 0e0eda59ecbffa3c3569b2641dca43a9 340 SUPERFAMILY SSF51735 141 304 3.23E-34 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS11910 0e0eda59ecbffa3c3569b2641dca43a9 340 SUPERFAMILY SSF50129 1 173 3.96E-57 T 05-07-2017 IPR011032 GroES-like AC028_RS11910 0e0eda59ecbffa3c3569b2641dca43a9 340 Pfam PF00107 Zinc-binding dehydrogenase 174 301 6.9E-29 T 05-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AC028_RS11910 0e0eda59ecbffa3c3569b2641dca43a9 340 SMART SM00829 12 337 4.3E-4 T 05-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AC028_RS11910 0e0eda59ecbffa3c3569b2641dca43a9 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 05-07-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AC028_RS11910 0e0eda59ecbffa3c3569b2641dca43a9 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 135 5.2E-34 T 05-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AC028_RS11910 0e0eda59ecbffa3c3569b2641dca43a9 340 Gene3D G3DSA:3.90.180.10 1 172 2.8E-52 T 05-07-2017 IPR011032 GroES-like AC028_RS11910 0e0eda59ecbffa3c3569b2641dca43a9 340 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 339 58.311 T 05-07-2017 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 AC028_RS11910 0e0eda59ecbffa3c3569b2641dca43a9 340 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 339 7.1E-147 T 05-07-2017 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 AC028_RS01855 3666b799fbdfaed0bed594ac29cf3c8b 537 Gene3D G3DSA:3.30.450.20 202 261 2.0E-4 T 05-07-2017 AC028_RS01855 3666b799fbdfaed0bed594ac29cf3c8b 537 Pfam PF00512 His Kinase A (phospho-acceptor) domain 315 379 2.2E-14 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS01855 3666b799fbdfaed0bed594ac29cf3c8b 537 Gene3D G3DSA:3.30.565.10 367 529 1.9E-32 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS01855 3666b799fbdfaed0bed594ac29cf3c8b 537 SUPERFAMILY SSF47384 312 379 2.35E-14 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS01855 3666b799fbdfaed0bed594ac29cf3c8b 537 SMART SM00388 315 381 9.4E-17 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS01855 3666b799fbdfaed0bed594ac29cf3c8b 537 SMART SM00387 423 532 1.1E-23 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS01855 3666b799fbdfaed0bed594ac29cf3c8b 537 SUPERFAMILY SSF55874 373 528 6.02E-30 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS01855 3666b799fbdfaed0bed594ac29cf3c8b 537 Gene3D G3DSA:1.10.287.130 315 366 1.3E-13 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS01855 3666b799fbdfaed0bed594ac29cf3c8b 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 510 1.3E-10 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS01855 3666b799fbdfaed0bed594ac29cf3c8b 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 491 1.3E-10 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS01855 3666b799fbdfaed0bed594ac29cf3c8b 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 529 1.3E-10 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS01855 3666b799fbdfaed0bed594ac29cf3c8b 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 477 1.3E-10 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS01855 3666b799fbdfaed0bed594ac29cf3c8b 537 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 529 2.9E-16 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS01090 13f36dc66d607471119fe121bdd54c11 613 SUPERFAMILY SSF49785 469 594 1.03E-22 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS01090 13f36dc66d607471119fe121bdd54c11 613 SUPERFAMILY SSF49785 382 480 1.08E-5 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS01090 13f36dc66d607471119fe121bdd54c11 613 PIRSF PIRSF006336 3 607 1.9E-182 T 05-07-2017 IPR026283 Beta-galactosidase 1-like GO:0004565 AC028_RS01090 13f36dc66d607471119fe121bdd54c11 613 Gene3D G3DSA:2.60.120.260 472 598 5.4E-20 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS01090 13f36dc66d607471119fe121bdd54c11 613 Gene3D G3DSA:3.20.20.80 34 359 2.0E-114 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS01090 13f36dc66d607471119fe121bdd54c11 613 Pfam PF01301 Glycosyl hydrolases family 35 38 355 7.3E-121 T 05-07-2017 IPR031330 Glycoside hydrolase 35, catalytic domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS01090 13f36dc66d607471119fe121bdd54c11 613 PRINTS PR00742 Glycosyl hydrolase family 35 signature 325 341 4.4E-47 T 05-07-2017 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS01090 13f36dc66d607471119fe121bdd54c11 613 PRINTS PR00742 Glycosyl hydrolase family 35 signature 63 81 4.4E-47 T 05-07-2017 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS01090 13f36dc66d607471119fe121bdd54c11 613 PRINTS PR00742 Glycosyl hydrolase family 35 signature 173 188 4.4E-47 T 05-07-2017 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS01090 13f36dc66d607471119fe121bdd54c11 613 PRINTS PR00742 Glycosyl hydrolase family 35 signature 551 567 4.4E-47 T 05-07-2017 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS01090 13f36dc66d607471119fe121bdd54c11 613 PRINTS PR00742 Glycosyl hydrolase family 35 signature 118 137 4.4E-47 T 05-07-2017 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS01090 13f36dc66d607471119fe121bdd54c11 613 PRINTS PR00742 Glycosyl hydrolase family 35 signature 259 274 4.4E-47 T 05-07-2017 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS01090 13f36dc66d607471119fe121bdd54c11 613 PRINTS PR00742 Glycosyl hydrolase family 35 signature 42 59 4.4E-47 T 05-07-2017 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS01090 13f36dc66d607471119fe121bdd54c11 613 SUPERFAMILY SSF51445 32 357 3.2E-95 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS01090 13f36dc66d607471119fe121bdd54c11 613 ProSitePatterns PS01182 Glycosyl hydrolases family 35 putative active site. 175 187 - T 05-07-2017 IPR019801 Glycoside hydrolase, family 35, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS05390 60046dca53da76f037fa6cabb26c7311 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 122 3.9E-10 T 05-07-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AC028_RS05390 60046dca53da76f037fa6cabb26c7311 131 Gene3D G3DSA:3.10.180.10 3 129 3.3E-29 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS05390 60046dca53da76f037fa6cabb26c7311 131 SUPERFAMILY SSF54593 5 128 3.09E-27 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS00435 02e5e0b92f495854a665753c3a79c98b 352 Gene3D G3DSA:3.30.1330.10 27 174 1.4E-62 T 05-07-2017 IPR016188 PurM-like, N-terminal domain AC028_RS00435 02e5e0b92f495854a665753c3a79c98b 352 Gene3D G3DSA:3.90.650.10 176 348 9.4E-64 T 05-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AC028_RS00435 02e5e0b92f495854a665753c3a79c98b 352 Pfam PF00586 AIR synthase related protein, N-terminal domain 66 168 6.7E-14 T 05-07-2017 IPR016188 PurM-like, N-terminal domain AC028_RS00435 02e5e0b92f495854a665753c3a79c98b 352 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 12 341 2.1E-135 T 05-07-2017 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AC028_RS00435 02e5e0b92f495854a665753c3a79c98b 352 Pfam PF02769 AIR synthase related protein, C-terminal domain 181 346 7.0E-37 T 05-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AC028_RS00435 02e5e0b92f495854a665753c3a79c98b 352 SUPERFAMILY SSF56042 176 346 7.03E-57 T 05-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AC028_RS00435 02e5e0b92f495854a665753c3a79c98b 352 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 12 351 45.846 T 05-07-2017 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AC028_RS00435 02e5e0b92f495854a665753c3a79c98b 352 SUPERFAMILY SSF55326 12 174 1.36E-52 T 05-07-2017 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 SUPERFAMILY SSF52172 2286 2405 7.97E-34 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 1809 1944 2.4E-5 T 05-07-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 SUPERFAMILY SSF50341 2130 2260 2.22E-23 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 Gene3D G3DSA:1.20.120.160 18 143 9.9E-14 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 Gene3D G3DSA:1.20.120.160 1640 1772 4.3E-26 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 Gene3D G3DSA:1.20.120.160 896 1026 3.0E-13 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 Gene3D G3DSA:1.20.120.160 732 871 1.9E-24 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 Gene3D G3DSA:3.40.50.2300 2284 2402 1.3E-35 T 05-07-2017 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 SMART SM00387 1990 2131 9.1E-22 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 Pfam PF01627 Hpt domain 13 111 3.1E-7 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 Pfam PF01627 Hpt domain 1643 1736 8.2E-15 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 Pfam PF01627 Hpt domain 899 988 8.5E-6 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 Pfam PF01627 Hpt domain 738 827 4.4E-12 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 SMART SM00260 2123 2261 1.9E-22 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 SMART SM00073 1640 1738 1.3E-15 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 SMART SM00073 735 832 1.6E-4 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 SUPERFAMILY SSF47226 294 412 2.44E-9 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2035 2049 3.1E-11 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2091 2109 3.1E-11 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2115 2128 3.1E-11 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 SUPERFAMILY SSF47226 13 133 6.67E-19 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 Gene3D G3DSA:3.30.565.10 1947 2128 2.2E-32 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 Gene3D G3DSA:1.10.287.560 1921 1946 3.7E-7 T 05-07-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 Gene3D G3DSA:1.10.287.560 1809 1842 3.7E-7 T 05-07-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 SMART SM01231 1807 1945 1.6E-11 T 05-07-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 Pfam PF00072 Response regulator receiver domain 2286 2396 4.9E-26 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 SUPERFAMILY SSF47226 734 844 1.31E-22 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 Pfam PF01584 CheW-like domain 2135 2263 7.6E-20 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 SUPERFAMILY SSF47226 1641 1757 3.79E-23 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 SUPERFAMILY SSF47226 896 1017 2.75E-14 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 SUPERFAMILY SSF55874 1947 2128 5.37E-35 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 SMART SM00448 2284 2397 2.0E-33 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 Gene3D G3DSA:2.30.30.40 2130 2152 3.0E-20 T 05-07-2017 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 Gene3D G3DSA:2.30.30.40 2216 2260 3.0E-20 T 05-07-2017 AC028_RS01165 d083340ca7052fd0602816982c9159c4 2408 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1994 2130 2.0E-16 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS11670 ac6aca5c90535ca860b8c96b69aa72f2 244 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 4.6E-40 T 05-07-2017 AC028_RS11670 ac6aca5c90535ca860b8c96b69aa72f2 244 Gene3D G3DSA:3.30.1140.32 108 207 2.1E-46 T 05-07-2017 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11670 ac6aca5c90535ca860b8c96b69aa72f2 244 SMART SM00322 60 125 1.5E-10 T 05-07-2017 IPR004087 K Homology domain GO:0003676 AC028_RS11670 ac6aca5c90535ca860b8c96b69aa72f2 244 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 05-07-2017 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11670 ac6aca5c90535ca860b8c96b69aa72f2 244 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 1.9E-95 T 05-07-2017 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AC028_RS11670 ac6aca5c90535ca860b8c96b69aa72f2 244 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.985 T 05-07-2017 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AC028_RS11670 ac6aca5c90535ca860b8c96b69aa72f2 244 Pfam PF07650 KH domain 38 111 1.1E-19 T 05-07-2017 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11670 ac6aca5c90535ca860b8c96b69aa72f2 244 SUPERFAMILY SSF54821 108 206 1.83E-40 T 05-07-2017 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11670 ac6aca5c90535ca860b8c96b69aa72f2 244 Gene3D G3DSA:3.30.300.20 17 107 8.1E-34 T 05-07-2017 IPR015946 K homology domain-like, alpha/beta AC028_RS11670 ac6aca5c90535ca860b8c96b69aa72f2 244 SUPERFAMILY SSF54814 2 106 2.25E-37 T 05-07-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 AC028_RS05995 47c64a1a17802bdcca27486fbee16152 142 SMART SM00422 9 77 4.8E-15 T 05-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AC028_RS05995 47c64a1a17802bdcca27486fbee16152 142 Gene3D G3DSA:1.10.1660.10 9 124 2.4E-25 T 05-07-2017 AC028_RS05995 47c64a1a17802bdcca27486fbee16152 142 SUPERFAMILY SSF46955 9 120 1.03E-22 T 05-07-2017 IPR009061 Putative DNA-binding domain AC028_RS05995 47c64a1a17802bdcca27486fbee16152 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 10 21 5.2E-5 T 05-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AC028_RS05995 47c64a1a17802bdcca27486fbee16152 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 21 34 5.2E-5 T 05-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AC028_RS05995 47c64a1a17802bdcca27486fbee16152 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 5.2E-5 T 05-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AC028_RS05995 47c64a1a17802bdcca27486fbee16152 142 Pfam PF13411 MerR HTH family regulatory protein 10 70 1.9E-11 T 05-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AC028_RS06035 73b22efbb7c54b9749b98355221e1154 459 SMART SM00387 346 458 7.2E-36 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS06035 73b22efbb7c54b9749b98355221e1154 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 411 3.0E-12 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS06035 73b22efbb7c54b9749b98355221e1154 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 436 3.0E-12 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS06035 73b22efbb7c54b9749b98355221e1154 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 397 3.0E-12 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS06035 73b22efbb7c54b9749b98355221e1154 459 SMART SM00304 183 235 4.5E-10 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS06035 73b22efbb7c54b9749b98355221e1154 459 SUPERFAMILY SSF47384 219 298 3.53E-15 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS06035 73b22efbb7c54b9749b98355221e1154 459 SMART SM00388 236 300 1.6E-13 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS06035 73b22efbb7c54b9749b98355221e1154 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 296 2.7E-13 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS06035 73b22efbb7c54b9749b98355221e1154 459 SUPERFAMILY SSF55874 289 455 7.6E-41 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS06035 73b22efbb7c54b9749b98355221e1154 459 Pfam PF00672 HAMP domain 164 232 1.1E-17 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS06035 73b22efbb7c54b9749b98355221e1154 459 Gene3D G3DSA:3.30.565.10 304 455 1.6E-40 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS06035 73b22efbb7c54b9749b98355221e1154 459 SUPERFAMILY SSF158472 183 232 3.14E-8 T 05-07-2017 AC028_RS06035 73b22efbb7c54b9749b98355221e1154 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 455 3.4E-20 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS06035 73b22efbb7c54b9749b98355221e1154 459 Gene3D G3DSA:1.10.287.130 227 295 6.9E-16 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS05350 1796a91ac6520288b9d1dcf30a0b1ce7 469 SUPERFAMILY SSF55931 102 467 3.24E-131 T 05-07-2017 AC028_RS05350 1796a91ac6520288b9d1dcf30a0b1ce7 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 467 1.8E-193 T 05-07-2017 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AC028_RS05350 1796a91ac6520288b9d1dcf30a0b1ce7 469 SUPERFAMILY SSF54368 3 100 1.14E-35 T 05-07-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AC028_RS05350 1796a91ac6520288b9d1dcf30a0b1ce7 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 4.6E-29 T 05-07-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AC028_RS05350 1796a91ac6520288b9d1dcf30a0b1ce7 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 05-07-2017 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AC028_RS05350 1796a91ac6520288b9d1dcf30a0b1ce7 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 05-07-2017 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AC028_RS05350 1796a91ac6520288b9d1dcf30a0b1ce7 469 Pfam PF00120 Glutamine synthetase, catalytic domain 102 466 5.8E-131 T 05-07-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AC028_RS05350 1796a91ac6520288b9d1dcf30a0b1ce7 469 Gene3D G3DSA:3.30.590.10 106 456 1.1E-130 T 05-07-2017 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AC028_RS05350 1796a91ac6520288b9d1dcf30a0b1ce7 469 Gene3D G3DSA:3.10.20.70 3 105 1.3E-37 T 05-07-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AC028_RS05350 1796a91ac6520288b9d1dcf30a0b1ce7 469 SMART SM01230 102 379 4.7E-138 T 05-07-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AC028_RS15190 6c69b7cf6674ffd0ff23078cbf55c25d 314 Pfam PF01012 Electron transfer flavoprotein domain 4 174 1.5E-32 T 05-07-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AC028_RS15190 6c69b7cf6674ffd0ff23078cbf55c25d 314 SUPERFAMILY SSF52402 3 178 1.12E-42 T 05-07-2017 AC028_RS15190 6c69b7cf6674ffd0ff23078cbf55c25d 314 PIRSF PIRSF000089 1 314 2.4E-102 T 05-07-2017 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 AC028_RS15190 6c69b7cf6674ffd0ff23078cbf55c25d 314 Gene3D G3DSA:3.40.50.620 1 175 9.0E-45 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS15190 6c69b7cf6674ffd0ff23078cbf55c25d 314 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 257 283 - T 05-07-2017 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 AC028_RS15190 6c69b7cf6674ffd0ff23078cbf55c25d 314 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 194 276 3.4E-35 T 05-07-2017 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 AC028_RS15190 6c69b7cf6674ffd0ff23078cbf55c25d 314 SUPERFAMILY SSF52467 191 312 1.41E-46 T 05-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AC028_RS15190 6c69b7cf6674ffd0ff23078cbf55c25d 314 Gene3D G3DSA:3.40.50.1220 189 313 2.7E-57 T 05-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AC028_RS15190 6c69b7cf6674ffd0ff23078cbf55c25d 314 SMART SM00893 4 186 9.9E-37 T 05-07-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AC028_RS11000 f960272106d9769297509737944d2838 395 Gene3D G3DSA:1.10.540.10 5 111 3.4E-30 T 05-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AC028_RS11000 f960272106d9769297509737944d2838 395 PIRSF PIRSF016578 1 393 6.8E-26 T 05-07-2017 AC028_RS11000 f960272106d9769297509737944d2838 395 Gene3D G3DSA:2.40.110.10 127 210 7.3E-15 T 05-07-2017 AC028_RS11000 f960272106d9769297509737944d2838 395 SUPERFAMILY SSF56645 12 216 2.09E-40 T 05-07-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AC028_RS11000 f960272106d9769297509737944d2838 395 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 235 370 1.1E-15 T 05-07-2017 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AC028_RS11000 f960272106d9769297509737944d2838 395 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 25 115 1.1E-12 T 05-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AC028_RS11000 f960272106d9769297509737944d2838 395 Gene3D G3DSA:1.20.140.10 211 394 2.7E-57 T 05-07-2017 AC028_RS11000 f960272106d9769297509737944d2838 395 SUPERFAMILY SSF47203 232 387 2.09E-22 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS13020 7f6720c27dd2130c1c80949e3de3529b 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 38.833 T 05-07-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 AC028_RS13020 7f6720c27dd2130c1c80949e3de3529b 316 Pfam PF02401 LytB protein 3 284 7.2E-92 T 05-07-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 AC028_RS13020 7f6720c27dd2130c1c80949e3de3529b 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 286 6.6E-100 T 05-07-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 AC028_RS16010 beef4c530897506fecd90efaf4d1a935 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 243 2.0E-52 T 05-07-2017 AC028_RS16010 beef4c530897506fecd90efaf4d1a935 246 SUPERFAMILY SSF51735 4 245 6.44E-67 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS16010 beef4c530897506fecd90efaf4d1a935 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.4E-12 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS16010 beef4c530897506fecd90efaf4d1a935 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.4E-12 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS16010 beef4c530897506fecd90efaf4d1a935 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.4E-12 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS16010 beef4c530897506fecd90efaf4d1a935 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 245 4.4E-99 T 05-07-2017 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216 AC028_RS16010 beef4c530897506fecd90efaf4d1a935 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.1E-36 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS16010 beef4c530897506fecd90efaf4d1a935 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.1E-36 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS16010 beef4c530897506fecd90efaf4d1a935 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.1E-36 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS16010 beef4c530897506fecd90efaf4d1a935 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.1E-36 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS16010 beef4c530897506fecd90efaf4d1a935 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.1E-36 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS16010 beef4c530897506fecd90efaf4d1a935 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.1E-36 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS16010 beef4c530897506fecd90efaf4d1a935 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 189 0.0031 T 05-07-2017 AC028_RS16010 beef4c530897506fecd90efaf4d1a935 246 Gene3D G3DSA:3.40.50.720 4 245 6.8E-70 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS17785 7e7d880536a2d682a5625a5adf31c818 470 SUPERFAMILY SSF55681 4 363 3.19E-72 T 05-07-2017 AC028_RS17785 7e7d880536a2d682a5625a5adf31c818 470 Pfam PF13393 Histidyl-tRNA synthetase 90 353 9.1E-28 T 05-07-2017 AC028_RS17785 7e7d880536a2d682a5625a5adf31c818 470 Pfam PF03129 Anticodon binding domain 372 459 1.7E-12 T 05-07-2017 IPR004154 Anticodon-binding AC028_RS17785 7e7d880536a2d682a5625a5adf31c818 470 SUPERFAMILY SSF52954 369 460 1.8E-20 T 05-07-2017 IPR004154 Anticodon-binding AC028_RS17785 7e7d880536a2d682a5625a5adf31c818 470 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 465 28.366 T 05-07-2017 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AC028_RS17785 7e7d880536a2d682a5625a5adf31c818 470 Gene3D G3DSA:3.40.50.800 368 459 3.1E-24 T 05-07-2017 IPR004154 Anticodon-binding AC028_RS17785 7e7d880536a2d682a5625a5adf31c818 470 PIRSF PIRSF001549 1 462 8.6E-140 T 05-07-2017 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AC028_RS17785 7e7d880536a2d682a5625a5adf31c818 470 Gene3D G3DSA:3.30.930.10 2 212 2.8E-88 T 05-07-2017 AC028_RS17785 7e7d880536a2d682a5625a5adf31c818 470 Gene3D G3DSA:3.30.930.10 270 362 2.8E-88 T 05-07-2017 AC028_RS17785 7e7d880536a2d682a5625a5adf31c818 470 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 451 3.9E-120 T 05-07-2017 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AC028_RS13085 8cb605ecfe4b65f2123fdb47cdac6df5 263 Gene3D G3DSA:3.40.50.2300 26 121 8.3E-6 T 05-07-2017 AC028_RS13085 8cb605ecfe4b65f2123fdb47cdac6df5 263 SUPERFAMILY SSF52172 28 177 7.18E-8 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS13085 8cb605ecfe4b65f2123fdb47cdac6df5 263 Gene3D G3DSA:1.10.10.10 135 235 1.3E-24 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS13085 8cb605ecfe4b65f2123fdb47cdac6df5 263 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 234 9.7E-19 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS13085 8cb605ecfe4b65f2123fdb47cdac6df5 263 SMART SM00862 157 234 3.9E-17 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS13085 8cb605ecfe4b65f2123fdb47cdac6df5 263 SUPERFAMILY SSF46894 135 235 1.86E-22 T 05-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AC028_RS14805 d4012455ee1eb5ae6916ecec0ea00c3d 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 1.1E-28 T 05-07-2017 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AC028_RS14805 d4012455ee1eb5ae6916ecec0ea00c3d 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.112 T 05-07-2017 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AC028_RS14805 d4012455ee1eb5ae6916ecec0ea00c3d 156 SUPERFAMILY SSF81573 62 121 4.32E-12 T 05-07-2017 IPR028987 F-type ATP synthase subunit B-like, membrane domain AC028_RS14805 d4012455ee1eb5ae6916ecec0ea00c3d 156 Gene3D G3DSA:1.20.5.620 63 122 1.4E-16 T 05-07-2017 IPR028987 F-type ATP synthase subunit B-like, membrane domain AC028_RS14805 d4012455ee1eb5ae6916ecec0ea00c3d 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 1.2E-39 T 05-07-2017 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 AC028_RS16345 800dbce915357e64741449a9462b8c4f 120 SMART SM00345 16 75 6.2E-12 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS16345 800dbce915357e64741449a9462b8c4f 120 SUPERFAMILY SSF46785 5 79 3.44E-19 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS16345 800dbce915357e64741449a9462b8c4f 120 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 6.2E-14 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS16345 800dbce915357e64741449a9462b8c4f 120 Gene3D G3DSA:1.10.10.10 4 75 1.6E-23 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS15560 7013730ffdf888f4aae1023be4c9557d 747 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 472 1.6E-132 T 05-07-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS15560 7013730ffdf888f4aae1023be4c9557d 747 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 649 698 9.6E-6 T 05-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AC028_RS15560 7013730ffdf888f4aae1023be4c9557d 747 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 602 639 0.094 T 05-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AC028_RS15560 7013730ffdf888f4aae1023be4c9557d 747 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 13 743 0.0 T 05-07-2017 AC028_RS15560 7013730ffdf888f4aae1023be4c9557d 747 SUPERFAMILY SSF101904 501 743 3.92E-46 T 05-07-2017 AC028_RS15560 7013730ffdf888f4aae1023be4c9557d 747 SMART SM00434 15 465 1.9E-221 T 05-07-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS15560 7013730ffdf888f4aae1023be4c9557d 747 Gene3D G3DSA:2.120.10.90 500 709 6.4E-27 T 05-07-2017 AC028_RS15560 7013730ffdf888f4aae1023be4c9557d 747 SUPERFAMILY SSF56719 35 487 7.85E-151 T 05-07-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AC028_RS15560 7013730ffdf888f4aae1023be4c9557d 747 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 745 33.765 T 05-07-2017 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AC028_RS15560 7013730ffdf888f4aae1023be4c9557d 747 Gene3D G3DSA:3.30.1360.40 242 335 1.5E-23 T 05-07-2017 IPR024946 Arginine repressor C-terminal-like domain AC028_RS15560 7013730ffdf888f4aae1023be4c9557d 747 Gene3D G3DSA:3.90.199.10 337 402 3.6E-102 T 05-07-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AC028_RS15560 7013730ffdf888f4aae1023be4c9557d 747 Gene3D G3DSA:3.90.199.10 35 241 3.6E-102 T 05-07-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AC028_RS06225 6d789e76e0752d5072d7579602838d3e 275 Gene3D G3DSA:1.10.10.10 21 74 1.8E-8 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS06225 6d789e76e0752d5072d7579602838d3e 275 SUPERFAMILY SSF100950 91 250 6.51E-26 T 05-07-2017 AC028_RS06225 6d789e76e0752d5072d7579602838d3e 275 Pfam PF00455 DeoR C terminal sensor domain 91 249 1.4E-51 T 05-07-2017 IPR014036 DeoR C-terminal sensor domain AC028_RS06225 6d789e76e0752d5072d7579602838d3e 275 ProSitePatterns PS00894 DeoR-type HTH domain signature. 23 57 - T 05-07-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AC028_RS06225 6d789e76e0752d5072d7579602838d3e 275 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 55 73 1.0E-7 T 05-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AC028_RS06225 6d789e76e0752d5072d7579602838d3e 275 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 55 1.0E-7 T 05-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AC028_RS06225 6d789e76e0752d5072d7579602838d3e 275 SMART SM01134 89 250 1.0E-71 T 05-07-2017 AC028_RS06225 6d789e76e0752d5072d7579602838d3e 275 Gene3D G3DSA:3.30.750.70 93 172 1.0E-12 T 05-07-2017 AC028_RS06225 6d789e76e0752d5072d7579602838d3e 275 SMART SM00420 23 75 8.8E-15 T 05-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AC028_RS06225 6d789e76e0752d5072d7579602838d3e 275 SUPERFAMILY SSF46785 20 94 1.11E-12 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS06225 6d789e76e0752d5072d7579602838d3e 275 Pfam PF08220 DeoR-like helix-turn-helix domain 23 78 9.9E-17 T 05-07-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AC028_RS17830 7e8b5eea487ab4bb91dd4d580bf2c289 206 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 206 35.121 T 05-07-2017 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 AC028_RS17830 7e8b5eea487ab4bb91dd4d580bf2c289 206 SUPERFAMILY SSF141734 13 113 2.62E-42 T 05-07-2017 AC028_RS17830 7e8b5eea487ab4bb91dd4d580bf2c289 206 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 119 198 9.5E-26 T 05-07-2017 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AC028_RS17830 7e8b5eea487ab4bb91dd4d580bf2c289 206 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 5.9E-31 T 05-07-2017 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AC028_RS17830 7e8b5eea487ab4bb91dd4d580bf2c289 206 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 9.0E-24 T 05-07-2017 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AC028_RS17830 7e8b5eea487ab4bb91dd4d580bf2c289 206 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 122 202 2.3E-11 T 05-07-2017 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AC028_RS17830 7e8b5eea487ab4bb91dd4d580bf2c289 206 SUPERFAMILY SSF101386 117 205 1.48E-20 T 05-07-2017 AC028_RS17830 7e8b5eea487ab4bb91dd4d580bf2c289 206 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 115 201 17.746 T 05-07-2017 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AC028_RS21675 410a532e41bd560e8a3a839b5ea40958 312 SUPERFAMILY SSF51197 3 308 6.59E-86 T 05-07-2017 AC028_RS21675 410a532e41bd560e8a3a839b5ea40958 312 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 173 271 2.6E-16 T 05-07-2017 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AC028_RS21675 410a532e41bd560e8a3a839b5ea40958 312 PRINTS PR00682 Isopenicillin N synthase signature 191 212 1.7E-8 T 05-07-2017 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 AC028_RS21675 410a532e41bd560e8a3a839b5ea40958 312 PRINTS PR00682 Isopenicillin N synthase signature 227 253 1.7E-8 T 05-07-2017 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 AC028_RS21675 410a532e41bd560e8a3a839b5ea40958 312 PRINTS PR00682 Isopenicillin N synthase signature 24 41 1.7E-8 T 05-07-2017 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 AC028_RS21675 410a532e41bd560e8a3a839b5ea40958 312 Gene3D G3DSA:2.60.120.330 3 308 7.2E-90 T 05-07-2017 IPR027443 Isopenicillin N synthase-like AC028_RS21675 410a532e41bd560e8a3a839b5ea40958 312 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 5 122 8.7E-31 T 05-07-2017 IPR026992 Non-haem dioxygenase N-terminal domain AC028_RS13145 671dc40db08181b2e198807129085089 148 ProSitePatterns PS00194 Thioredoxin family active site. 62 80 - T 05-07-2017 IPR017937 Thioredoxin, conserved site GO:0045454 AC028_RS13145 671dc40db08181b2e198807129085089 148 SUPERFAMILY SSF52833 30 146 5.1E-35 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS13145 671dc40db08181b2e198807129085089 148 PRINTS PR00421 Thioredoxin family signature 69 78 1.8E-7 T 05-07-2017 AC028_RS13145 671dc40db08181b2e198807129085089 148 PRINTS PR00421 Thioredoxin family signature 109 120 1.8E-7 T 05-07-2017 AC028_RS13145 671dc40db08181b2e198807129085089 148 PRINTS PR00421 Thioredoxin family signature 61 69 1.8E-7 T 05-07-2017 AC028_RS13145 671dc40db08181b2e198807129085089 148 Pfam PF00085 Thioredoxin 44 142 9.8E-25 T 05-07-2017 IPR013766 Thioredoxin domain GO:0045454 AC028_RS13145 671dc40db08181b2e198807129085089 148 Gene3D G3DSA:3.40.30.10 42 146 1.5E-31 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS20300 ffc493f26ef02b77a9066baa9f04f4e0 203 SUPERFAMILY SSF46609 1 90 1.23E-37 T 05-07-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS20300 ffc493f26ef02b77a9066baa9f04f4e0 203 PIRSF PIRSF000349 1 203 2.2E-82 T 05-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS20300 ffc493f26ef02b77a9066baa9f04f4e0 203 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 197 1.0E-39 T 05-07-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS20300 ffc493f26ef02b77a9066baa9f04f4e0 203 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 05-07-2017 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS20300 ffc493f26ef02b77a9066baa9f04f4e0 203 SUPERFAMILY SSF54719 88 201 8.12E-46 T 05-07-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS20300 ffc493f26ef02b77a9066baa9f04f4e0 203 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 5.7E-28 T 05-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS20300 ffc493f26ef02b77a9066baa9f04f4e0 203 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 5.7E-28 T 05-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS20300 ffc493f26ef02b77a9066baa9f04f4e0 203 PRINTS PR01703 Manganese superoxide dismutase signature 125 133 5.7E-28 T 05-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS20300 ffc493f26ef02b77a9066baa9f04f4e0 203 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 5.7E-28 T 05-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS20300 ffc493f26ef02b77a9066baa9f04f4e0 203 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 5.7E-28 T 05-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS20300 ffc493f26ef02b77a9066baa9f04f4e0 203 Gene3D G3DSA:1.10.287.990 20 89 5.4E-31 T 05-07-2017 AC028_RS20300 ffc493f26ef02b77a9066baa9f04f4e0 203 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 2.4E-34 T 05-07-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS09300 f4bd081b2c0008053578621538d0fd67 896 Gene3D G3DSA:2.60.40.320 233 369 3.9E-23 T 05-07-2017 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 AC028_RS09300 f4bd081b2c0008053578621538d0fd67 896 SUPERFAMILY SSF49785 18 37 8.38E-44 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS09300 f4bd081b2c0008053578621538d0fd67 896 SUPERFAMILY SSF49785 109 266 8.38E-44 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS09300 f4bd081b2c0008053578621538d0fd67 896 Pfam PF16355 Domain of unknown function (DUF4982) 717 777 1.1E-23 T 05-07-2017 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS09300 f4bd081b2c0008053578621538d0fd67 896 SUPERFAMILY SSF51445 371 702 1.08E-74 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS09300 f4bd081b2c0008053578621538d0fd67 896 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 120 242 4.2E-12 T 05-07-2017 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS09300 f4bd081b2c0008053578621538d0fd67 896 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 481 495 - T 05-07-2017 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 AC028_RS09300 f4bd081b2c0008053578621538d0fd67 896 PRINTS PR00132 Glycosyl hydrolase family 2 signature 411 429 1.4E-14 T 05-07-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 AC028_RS09300 f4bd081b2c0008053578621538d0fd67 896 PRINTS PR00132 Glycosyl hydrolase family 2 signature 176 191 1.4E-14 T 05-07-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 AC028_RS09300 f4bd081b2c0008053578621538d0fd67 896 PRINTS PR00132 Glycosyl hydrolase family 2 signature 380 394 1.4E-14 T 05-07-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 AC028_RS09300 f4bd081b2c0008053578621538d0fd67 896 PRINTS PR00132 Glycosyl hydrolase family 2 signature 481 496 1.4E-14 T 05-07-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 AC028_RS09300 f4bd081b2c0008053578621538d0fd67 896 Gene3D G3DSA:2.60.40.1560 705 795 2.2E-33 T 05-07-2017 AC028_RS09300 f4bd081b2c0008053578621538d0fd67 896 SUPERFAMILY SSF49303 255 368 7.55E-13 T 05-07-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AC028_RS09300 f4bd081b2c0008053578621538d0fd67 896 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 375 557 9.9E-30 T 05-07-2017 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS09300 f4bd081b2c0008053578621538d0fd67 896 Pfam PF00703 Glycosyl hydrolases family 2 256 368 1.4E-11 T 05-07-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AC028_RS09300 f4bd081b2c0008053578621538d0fd67 896 Gene3D G3DSA:3.20.20.80 372 700 3.0E-81 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS09300 f4bd081b2c0008053578621538d0fd67 896 Gene3D G3DSA:2.60.120.260 104 232 3.2E-46 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS09300 f4bd081b2c0008053578621538d0fd67 896 Gene3D G3DSA:2.60.120.260 12 37 3.2E-46 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS17265 ee447110af4602db35bf4eb9786a7f04 430 SUPERFAMILY SSF51604 142 426 4.32E-127 T 05-07-2017 IPR029065 Enolase C-terminal domain-like AC028_RS17265 ee447110af4602db35bf4eb9786a7f04 430 SUPERFAMILY SSF54826 4 136 1.04E-53 T 05-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS17265 ee447110af4602db35bf4eb9786a7f04 430 SMART SM01192 141 427 3.8E-219 T 05-07-2017 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS17265 ee447110af4602db35bf4eb9786a7f04 430 PRINTS PR00148 Enolase signature 365 382 2.9E-45 T 05-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS17265 ee447110af4602db35bf4eb9786a7f04 430 PRINTS PR00148 Enolase signature 37 51 2.9E-45 T 05-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS17265 ee447110af4602db35bf4eb9786a7f04 430 PRINTS PR00148 Enolase signature 107 123 2.9E-45 T 05-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS17265 ee447110af4602db35bf4eb9786a7f04 430 PRINTS PR00148 Enolase signature 313 324 2.9E-45 T 05-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS17265 ee447110af4602db35bf4eb9786a7f04 430 PRINTS PR00148 Enolase signature 336 350 2.9E-45 T 05-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS17265 ee447110af4602db35bf4eb9786a7f04 430 PRINTS PR00148 Enolase signature 163 176 2.9E-45 T 05-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS17265 ee447110af4602db35bf4eb9786a7f04 430 SMART SM01193 4 134 2.1E-89 T 05-07-2017 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS17265 ee447110af4602db35bf4eb9786a7f04 430 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 2.7E-201 T 05-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS17265 ee447110af4602db35bf4eb9786a7f04 430 Gene3D G3DSA:3.20.20.120 129 426 1.2E-131 T 05-07-2017 IPR029065 Enolase C-terminal domain-like AC028_RS17265 ee447110af4602db35bf4eb9786a7f04 430 Gene3D G3DSA:3.30.390.10 3 126 1.3E-52 T 05-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS17265 ee447110af4602db35bf4eb9786a7f04 430 Pfam PF03952 Enolase, N-terminal domain 4 134 3.3E-56 T 05-07-2017 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS17265 ee447110af4602db35bf4eb9786a7f04 430 ProSitePatterns PS00164 Enolase signature. 336 349 - T 05-07-2017 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS17265 ee447110af4602db35bf4eb9786a7f04 430 Hamap MF_00318 Enolase [eno]. 2 413 44.154 T 05-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS17265 ee447110af4602db35bf4eb9786a7f04 430 Pfam PF00113 Enolase, C-terminal TIM barrel domain 142 425 1.0E-132 T 05-07-2017 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS17265 ee447110af4602db35bf4eb9786a7f04 430 PIRSF PIRSF001400 1 427 1.4E-185 T 05-07-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS20185 6290ead9d92fe2e9d27bbe5d8d67c0e2 454 Pfam PF13520 Amino acid permease 13 422 6.2E-38 T 05-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AC028_RS20185 6290ead9d92fe2e9d27bbe5d8d67c0e2 454 TIGRFAM TIGR00908 2A0305: ethanolamine permease 7 438 3.4E-182 T 05-07-2017 IPR004757 Ethanolamine permease AC028_RS20185 6290ead9d92fe2e9d27bbe5d8d67c0e2 454 PIRSF PIRSF006060 1 447 2.1E-65 T 05-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 Gene3D G3DSA:3.30.390.30 347 477 1.1E-47 T 05-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 PIRSF PIRSF000350 1 478 1.3E-73 T 05-07-2017 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 48 58 - T 05-07-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 340 1.3E-63 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 185 203 2.4E-35 T 05-07-2017 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 292 2.4E-35 T 05-07-2017 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 305 327 2.4E-35 T 05-07-2017 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.4E-35 T 05-07-2017 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 2.4E-35 T 05-07-2017 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 Gene3D G3DSA:3.50.50.60 150 346 3.3E-48 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 SUPERFAMILY SSF55424 356 477 4.47E-42 T 05-07-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 477 1.4E-150 T 05-07-2017 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 SUPERFAMILY SSF51905 4 348 2.9E-56 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 359 467 6.3E-37 T 05-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 47 62 2.7E-72 T 05-07-2017 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 291 2.7E-72 T 05-07-2017 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.7E-72 T 05-07-2017 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 355 376 2.7E-72 T 05-07-2017 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 442 462 2.7E-72 T 05-07-2017 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 158 2.7E-72 T 05-07-2017 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 185 210 2.7E-72 T 05-07-2017 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 320 327 2.7E-72 T 05-07-2017 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 420 435 2.7E-72 T 05-07-2017 AC028_RS16260 11cf9d9ec3840accc8e82ec1b26616e4 480 Gene3D G3DSA:3.50.50.60 5 149 2.6E-34 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS15315 e3c0836d001754eac376a52823459b0b 465 ProSitePatterns PS00218 Amino acid permeases signature. 45 76 - T 05-07-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AC028_RS15315 e3c0836d001754eac376a52823459b0b 465 PIRSF PIRSF006060 1 465 5.4E-74 T 05-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AC028_RS15315 e3c0836d001754eac376a52823459b0b 465 Pfam PF00324 Amino acid permease 20 449 1.1E-107 T 05-07-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AC028_RS03230 46de66f98571660116b02a3e9af2c4ea 295 Gene3D G3DSA:3.30.1300.30 179 295 1.3E-11 T 05-07-2017 AC028_RS03230 46de66f98571660116b02a3e9af2c4ea 295 SUPERFAMILY SSF101967 19 183 6.15E-29 T 05-07-2017 AC028_RS03230 46de66f98571660116b02a3e9af2c4ea 295 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 161 181 1.5E-7 T 05-07-2017 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AC028_RS03230 46de66f98571660116b02a3e9af2c4ea 295 Gene3D G3DSA:2.150.10.10 14 178 2.7E-31 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS03230 46de66f98571660116b02a3e9af2c4ea 295 SUPERFAMILY SSF54523 173 295 3.3E-14 T 05-07-2017 AC028_RS03230 46de66f98571660116b02a3e9af2c4ea 295 Pfam PF05658 Head domain of trimeric autotransporter adhesin 132 156 1.7E-4 T 05-07-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 AC028_RS03230 46de66f98571660116b02a3e9af2c4ea 295 Pfam PF05658 Head domain of trimeric autotransporter adhesin 74 100 5.5E-5 T 05-07-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 AC028_RS03230 46de66f98571660116b02a3e9af2c4ea 295 Pfam PF03895 YadA-like C-terminal region 219 295 3.8E-11 T 05-07-2017 IPR005594 YadA-like, C-terminal AC028_RS16625 0d0d75ca3bb7bee7d140d93981b916e8 537 Gene3D G3DSA:3.40.50.300 10 264 5.6E-34 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS16625 0d0d75ca3bb7bee7d140d93981b916e8 537 Pfam PF00005 ABC transporter 358 485 1.3E-16 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS16625 0d0d75ca3bb7bee7d140d93981b916e8 537 Pfam PF00005 ABC transporter 32 171 1.2E-17 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS16625 0d0d75ca3bb7bee7d140d93981b916e8 537 SMART SM00382 30 359 5.1E-12 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS16625 0d0d75ca3bb7bee7d140d93981b916e8 537 SMART SM00382 364 531 5.1E-15 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS16625 0d0d75ca3bb7bee7d140d93981b916e8 537 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS16625 0d0d75ca3bb7bee7d140d93981b916e8 537 Gene3D G3DSA:3.40.50.300 358 518 2.8E-31 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS16625 0d0d75ca3bb7bee7d140d93981b916e8 537 SUPERFAMILY SSF52540 358 517 2.32E-32 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS16625 0d0d75ca3bb7bee7d140d93981b916e8 537 SUPERFAMILY SSF52540 18 222 2.62E-36 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS17805 2ae6e69e82165f9cf729bd99aa789d96 363 Gene3D G3DSA:3.40.640.10 45 259 1.1E-64 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS17805 2ae6e69e82165f9cf729bd99aa789d96 363 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 11 357 2.2E-107 T 05-07-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AC028_RS17805 2ae6e69e82165f9cf729bd99aa789d96 363 Gene3D G3DSA:3.90.1150.10 260 357 4.4E-24 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS17805 2ae6e69e82165f9cf729bd99aa789d96 363 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 9 359 53.29 T 05-07-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AC028_RS17805 2ae6e69e82165f9cf729bd99aa789d96 363 SUPERFAMILY SSF53383 27 357 4.13E-72 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS17805 2ae6e69e82165f9cf729bd99aa789d96 363 Pfam PF00155 Aminotransferase class I and II 50 355 1.1E-50 T 05-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AC028_RS02455 9d27773c51816ac4c895de9b38cca738 339 Gene3D G3DSA:1.10.8.300 223 335 3.8E-38 T 05-07-2017 AC028_RS02455 9d27773c51816ac4c895de9b38cca738 339 PIRSF PIRSF002849 9 339 1.2E-125 T 05-07-2017 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted AC028_RS02455 9d27773c51816ac4c895de9b38cca738 339 SUPERFAMILY SSF52540 24 311 4.4E-47 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02455 9d27773c51816ac4c895de9b38cca738 339 Gene3D G3DSA:3.40.50.300 36 200 7.8E-43 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02455 9d27773c51816ac4c895de9b38cca738 339 SMART SM00382 51 192 0.0062 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS02455 9d27773c51816ac4c895de9b38cca738 339 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 54 184 1.0E-62 T 05-07-2017 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AC028_RS20150 021108065389d849e5df2a99b0b5454b 476 Gene3D G3DSA:3.40.50.620 26 308 3.3E-97 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS20150 021108065389d849e5df2a99b0b5454b 476 Pfam PF09190 DALR domain 350 419 2.7E-11 T 05-07-2017 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AC028_RS20150 021108065389d849e5df2a99b0b5454b 476 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 20 317 6.6E-113 T 05-07-2017 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AC028_RS20150 021108065389d849e5df2a99b0b5454b 476 SUPERFAMILY SSF52374 6 317 5.63E-90 T 05-07-2017 AC028_RS20150 021108065389d849e5df2a99b0b5454b 476 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 5 475 1.9E-148 T 05-07-2017 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AC028_RS20150 021108065389d849e5df2a99b0b5454b 476 Gene3D G3DSA:1.20.120.640 311 400 5.7E-15 T 05-07-2017 AC028_RS20150 021108065389d849e5df2a99b0b5454b 476 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 5 476 37.12 T 05-07-2017 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AC028_RS20150 021108065389d849e5df2a99b0b5454b 476 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 64 73 7.7E-29 T 05-07-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AC028_RS20150 021108065389d849e5df2a99b0b5454b 476 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 193 211 7.7E-29 T 05-07-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AC028_RS20150 021108065389d849e5df2a99b0b5454b 476 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 28 39 7.7E-29 T 05-07-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AC028_RS20150 021108065389d849e5df2a99b0b5454b 476 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 224 245 7.7E-29 T 05-07-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AC028_RS20150 021108065389d849e5df2a99b0b5454b 476 SUPERFAMILY SSF47323 319 475 8.89E-31 T 05-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS20150 021108065389d849e5df2a99b0b5454b 476 SMART SM00840 349 419 1.8E-12 T 05-07-2017 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AC028_RS13285 b92fd5f8c0f7b3d3fcae5a3ee53ed3be 873 Gene3D G3DSA:3.40.1170.10 14 132 2.0E-48 T 05-07-2017 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 AC028_RS13285 b92fd5f8c0f7b3d3fcae5a3ee53ed3be 873 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 699 715 - T 05-07-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AC028_RS13285 b92fd5f8c0f7b3d3fcae5a3ee53ed3be 873 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 19 865 24.744 T 05-07-2017 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 AC028_RS13285 b92fd5f8c0f7b3d3fcae5a3ee53ed3be 873 SUPERFAMILY SSF55271 12 127 7.19E-42 T 05-07-2017 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 AC028_RS13285 b92fd5f8c0f7b3d3fcae5a3ee53ed3be 873 Gene3D G3DSA:1.10.1420.10 329 488 1.5E-49 T 05-07-2017 AC028_RS13285 b92fd5f8c0f7b3d3fcae5a3ee53ed3be 873 Pfam PF05188 MutS domain II 141 264 6.6E-28 T 05-07-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AC028_RS13285 b92fd5f8c0f7b3d3fcae5a3ee53ed3be 873 SMART SM00533 295 602 4.5E-89 T 05-07-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AC028_RS13285 b92fd5f8c0f7b3d3fcae5a3ee53ed3be 873 SUPERFAMILY SSF48334 279 576 4.58E-81 T 05-07-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AC028_RS13285 b92fd5f8c0f7b3d3fcae5a3ee53ed3be 873 SUPERFAMILY SSF52540 578 814 5.65E-58 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS13285 b92fd5f8c0f7b3d3fcae5a3ee53ed3be 873 Pfam PF01624 MutS domain I 20 131 6.9E-41 T 05-07-2017 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 AC028_RS13285 b92fd5f8c0f7b3d3fcae5a3ee53ed3be 873 Gene3D G3DSA:3.30.420.110 139 267 8.9E-41 T 05-07-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AC028_RS13285 b92fd5f8c0f7b3d3fcae5a3ee53ed3be 873 Pfam PF05192 MutS domain III 281 570 3.0E-34 T 05-07-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AC028_RS13285 b92fd5f8c0f7b3d3fcae5a3ee53ed3be 873 Pfam PF00488 MutS domain V 621 813 6.5E-82 T 05-07-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AC028_RS13285 b92fd5f8c0f7b3d3fcae5a3ee53ed3be 873 SUPERFAMILY SSF53150 126 277 2.22E-41 T 05-07-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AC028_RS13285 b92fd5f8c0f7b3d3fcae5a3ee53ed3be 873 SMART SM00534 618 810 5.6E-112 T 05-07-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AC028_RS13285 b92fd5f8c0f7b3d3fcae5a3ee53ed3be 873 Pfam PF05190 MutS family domain IV 439 530 6.4E-29 T 05-07-2017 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AC028_RS13285 b92fd5f8c0f7b3d3fcae5a3ee53ed3be 873 Gene3D G3DSA:3.40.50.300 580 814 1.2E-78 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS13285 b92fd5f8c0f7b3d3fcae5a3ee53ed3be 873 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 19 870 0.0 T 05-07-2017 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 AC028_RS01640 af820c31befec47d13eb90abcbfd22c0 348 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 14 345 6.3E-133 T 05-07-2017 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AC028_RS01640 af820c31befec47d13eb90abcbfd22c0 348 Pfam PF02277 Phosphoribosyltransferase 13 345 1.5E-125 T 05-07-2017 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AC028_RS01640 af820c31befec47d13eb90abcbfd22c0 348 Gene3D G3DSA:1.10.1610.10 4 71 6.3E-30 T 05-07-2017 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AC028_RS01640 af820c31befec47d13eb90abcbfd22c0 348 SUPERFAMILY SSF52733 5 346 1.7E-112 T 05-07-2017 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AC028_RS01640 af820c31befec47d13eb90abcbfd22c0 348 Gene3D G3DSA:3.40.50.10210 72 328 3.0E-100 T 05-07-2017 AC028_RS01640 af820c31befec47d13eb90abcbfd22c0 348 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 12 347 36.349 T 05-07-2017 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AC028_RS00255 e993a9fd57e7f2782a1a7d437523e101 376 SUPERFAMILY SSF52540 8 341 2.28E-69 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS00255 e993a9fd57e7f2782a1a7d437523e101 376 Gene3D G3DSA:3.40.50.300 105 347 1.5E-62 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS00255 e993a9fd57e7f2782a1a7d437523e101 376 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 7 347 2.2E-135 T 05-07-2017 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 AC028_RS00255 e993a9fd57e7f2782a1a7d437523e101 376 Pfam PF00437 Type II/IV secretion system protein 12 252 1.9E-34 T 05-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AC028_RS16455 6b927a36bc3659bf9ca2aa3eee9a8cc8 36 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 7 31 4.2E-7 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS16455 6b927a36bc3659bf9ca2aa3eee9a8cc8 36 SUPERFAMILY SSF47203 7 35 3.22E-7 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS16455 6b927a36bc3659bf9ca2aa3eee9a8cc8 36 Gene3D G3DSA:1.20.140.10 7 35 2.4E-9 T 05-07-2017 AC028_RS16425 6b927a36bc3659bf9ca2aa3eee9a8cc8 36 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 7 31 4.2E-7 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS16425 6b927a36bc3659bf9ca2aa3eee9a8cc8 36 SUPERFAMILY SSF47203 7 35 3.22E-7 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS16425 6b927a36bc3659bf9ca2aa3eee9a8cc8 36 Gene3D G3DSA:1.20.140.10 7 35 2.4E-9 T 05-07-2017 AC028_RS16445 6b927a36bc3659bf9ca2aa3eee9a8cc8 36 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 7 31 4.2E-7 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS16445 6b927a36bc3659bf9ca2aa3eee9a8cc8 36 SUPERFAMILY SSF47203 7 35 3.22E-7 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS16445 6b927a36bc3659bf9ca2aa3eee9a8cc8 36 Gene3D G3DSA:1.20.140.10 7 35 2.4E-9 T 05-07-2017 AC028_RS16430 6b927a36bc3659bf9ca2aa3eee9a8cc8 36 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 7 31 4.2E-7 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS16430 6b927a36bc3659bf9ca2aa3eee9a8cc8 36 SUPERFAMILY SSF47203 7 35 3.22E-7 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS16430 6b927a36bc3659bf9ca2aa3eee9a8cc8 36 Gene3D G3DSA:1.20.140.10 7 35 2.4E-9 T 05-07-2017 AC028_RS16435 6b927a36bc3659bf9ca2aa3eee9a8cc8 36 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 7 31 4.2E-7 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS16435 6b927a36bc3659bf9ca2aa3eee9a8cc8 36 SUPERFAMILY SSF47203 7 35 3.22E-7 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS16435 6b927a36bc3659bf9ca2aa3eee9a8cc8 36 Gene3D G3DSA:1.20.140.10 7 35 2.4E-9 T 05-07-2017 AC028_RS18350 56c530c9cad9d44011d25ede9ee26279 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 37 50 4.7E-50 T 05-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AC028_RS18350 56c530c9cad9d44011d25ede9ee26279 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 141 157 4.7E-50 T 05-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AC028_RS18350 56c530c9cad9d44011d25ede9ee26279 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 160 178 4.7E-50 T 05-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AC028_RS18350 56c530c9cad9d44011d25ede9ee26279 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 74 93 4.7E-50 T 05-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AC028_RS18350 56c530c9cad9d44011d25ede9ee26279 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 190 207 4.7E-50 T 05-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AC028_RS18350 56c530c9cad9d44011d25ede9ee26279 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 241 255 4.7E-50 T 05-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AC028_RS18350 56c530c9cad9d44011d25ede9ee26279 697 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 23 696 9.1E-252 T 05-07-2017 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 AC028_RS18350 56c530c9cad9d44011d25ede9ee26279 697 PIRSF PIRSF005419 9 697 2.6E-235 T 05-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AC028_RS18350 56c530c9cad9d44011d25ede9ee26279 697 Pfam PF00771 FHIPEP family 30 687 3.0E-257 T 05-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AC028_RS12660 7aaf97e103269bb98d9c36579fbe6c8a 192 SUPERFAMILY SSF47741 106 176 7.2E-29 T 05-07-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AC028_RS12660 7aaf97e103269bb98d9c36579fbe6c8a 192 Gene3D G3DSA:1.10.150.120 97 176 1.1E-31 T 05-07-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AC028_RS12660 7aaf97e103269bb98d9c36579fbe6c8a 192 Pfam PF01799 [2Fe-2S] binding domain 95 167 7.3E-30 T 05-07-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AC028_RS12660 7aaf97e103269bb98d9c36579fbe6c8a 192 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 61 69 - T 05-07-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AC028_RS12660 7aaf97e103269bb98d9c36579fbe6c8a 192 Gene3D G3DSA:3.10.20.30 24 96 2.1E-31 T 05-07-2017 IPR012675 Beta-grasp domain AC028_RS12660 7aaf97e103269bb98d9c36579fbe6c8a 192 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 28 77 5.6E-6 T 05-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AC028_RS12660 7aaf97e103269bb98d9c36579fbe6c8a 192 SUPERFAMILY SSF54292 22 109 6.95E-27 T 05-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AC028_RS15130 b30f391e19be791246b73d298f2e2a14 299 Pfam PF01370 NAD dependent epimerase/dehydratase family 12 230 1.1E-38 T 05-07-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AC028_RS15130 b30f391e19be791246b73d298f2e2a14 299 Gene3D G3DSA:3.90.25.10 203 298 4.2E-11 T 05-07-2017 AC028_RS15130 b30f391e19be791246b73d298f2e2a14 299 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 05-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AC028_RS15130 b30f391e19be791246b73d298f2e2a14 299 Gene3D G3DSA:3.40.50.720 12 202 1.3E-40 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS15130 b30f391e19be791246b73d298f2e2a14 299 SUPERFAMILY SSF51735 8 298 1.07E-60 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS15745 44e1c3b06ffd4855f055bc7fbcf2fab9 184 Pfam PF03358 NADPH-dependent FMN reductase 5 148 4.3E-39 T 05-07-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AC028_RS15745 44e1c3b06ffd4855f055bc7fbcf2fab9 184 Gene3D G3DSA:3.40.50.360 1 182 8.9E-52 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS15745 44e1c3b06ffd4855f055bc7fbcf2fab9 184 SUPERFAMILY SSF52218 5 175 1.09E-48 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS12115 be1b51bd47a6418230869d444dcbb7ee 392 SUPERFAMILY SSF54106 344 387 5.23E-9 T 05-07-2017 IPR018392 LysM domain AC028_RS12115 be1b51bd47a6418230869d444dcbb7ee 392 SMART SM00257 345 389 5.4E-10 T 05-07-2017 IPR018392 LysM domain AC028_RS12115 be1b51bd47a6418230869d444dcbb7ee 392 Gene3D G3DSA:3.10.350.10 343 386 4.2E-13 T 05-07-2017 IPR018392 LysM domain AC028_RS12115 be1b51bd47a6418230869d444dcbb7ee 392 Gene3D G3DSA:1.10.530.10 91 243 5.8E-34 T 05-07-2017 AC028_RS12115 be1b51bd47a6418230869d444dcbb7ee 392 Pfam PF01464 Transglycosylase SLT domain 100 204 1.2E-22 T 05-07-2017 IPR008258 Transglycosylase SLT domain 1 AC028_RS12115 be1b51bd47a6418230869d444dcbb7ee 392 Pfam PF01476 LysM domain 346 386 2.1E-10 T 05-07-2017 IPR018392 LysM domain AC028_RS12115 be1b51bd47a6418230869d444dcbb7ee 392 SUPERFAMILY SSF53955 90 239 3.14E-32 T 05-07-2017 IPR023346 Lysozyme-like domain AC028_RS10845 fbf2407585c66a829cc63522c5362c6a 332 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 318 2.8E-119 T 05-07-2017 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 AC028_RS10845 fbf2407585c66a829cc63522c5362c6a 332 Gene3D G3DSA:3.20.20.70 8 243 3.0E-84 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS10845 fbf2407585c66a829cc63522c5362c6a 332 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 05-07-2017 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AC028_RS10845 fbf2407585c66a829cc63522c5362c6a 332 SUPERFAMILY SSF51395 10 318 7.14E-91 T 05-07-2017 AC028_RS10845 fbf2407585c66a829cc63522c5362c6a 332 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.579 T 05-07-2017 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 AC028_RS10845 fbf2407585c66a829cc63522c5362c6a 332 Gene3D G3DSA:1.10.1200.80 255 320 3.6E-19 T 05-07-2017 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 AC028_RS10845 fbf2407585c66a829cc63522c5362c6a 332 Pfam PF01207 Dihydrouridine synthase (Dus) 13 316 5.0E-104 T 05-07-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AC028_RS10845 fbf2407585c66a829cc63522c5362c6a 332 PIRSF PIRSF006621 1 325 2.0E-108 T 05-07-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AC028_RS17965 0fb51a6b38f2847ba8624a251dc659d4 391 SMART SM01097 3 133 9.5E-89 T 05-07-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AC028_RS17965 0fb51a6b38f2847ba8624a251dc659d4 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 246 260 2.9E-38 T 05-07-2017 AC028_RS17965 0fb51a6b38f2847ba8624a251dc659d4 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 207 221 2.9E-38 T 05-07-2017 AC028_RS17965 0fb51a6b38f2847ba8624a251dc659d4 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 294 311 2.9E-38 T 05-07-2017 AC028_RS17965 0fb51a6b38f2847ba8624a251dc659d4 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 319 330 2.9E-38 T 05-07-2017 AC028_RS17965 0fb51a6b38f2847ba8624a251dc659d4 391 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 277 293 2.9E-38 T 05-07-2017 AC028_RS17965 0fb51a6b38f2847ba8624a251dc659d4 391 Pfam PF00117 Glutamine amidotransferase class-I 210 385 1.1E-45 T 05-07-2017 IPR017926 Glutamine amidotransferase AC028_RS17965 0fb51a6b38f2847ba8624a251dc659d4 391 Gene3D G3DSA:3.40.50.880 153 388 9.7E-79 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS17965 0fb51a6b38f2847ba8624a251dc659d4 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 249 258 3.4E-10 T 05-07-2017 AC028_RS17965 0fb51a6b38f2847ba8624a251dc659d4 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 362 375 3.4E-10 T 05-07-2017 AC028_RS17965 0fb51a6b38f2847ba8624a251dc659d4 391 PRINTS PR00096 Glutamine amidotransferase superfamily signature 277 288 3.4E-10 T 05-07-2017 AC028_RS17965 0fb51a6b38f2847ba8624a251dc659d4 391 SUPERFAMILY SSF52021 4 149 7.59E-57 T 05-07-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AC028_RS17965 0fb51a6b38f2847ba8624a251dc659d4 391 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 391 48.34 T 05-07-2017 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AC028_RS17965 0fb51a6b38f2847ba8624a251dc659d4 391 SUPERFAMILY SSF52317 204 389 4.13E-61 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS17965 0fb51a6b38f2847ba8624a251dc659d4 391 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 388 1.1E-143 T 05-07-2017 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AC028_RS17965 0fb51a6b38f2847ba8624a251dc659d4 391 Gene3D G3DSA:3.50.30.20 4 145 4.7E-61 T 05-07-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AC028_RS17965 0fb51a6b38f2847ba8624a251dc659d4 391 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 131 6.5E-53 T 05-07-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AC028_RS08135 3c685ddffba3fe9648e11e5441128be5 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 3.8E-48 T 05-07-2017 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AC028_RS08135 3c685ddffba3fe9648e11e5441128be5 130 Gene3D G3DSA:3.30.230.10 5 130 1.7E-51 T 05-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_RS08135 3c685ddffba3fe9648e11e5441128be5 130 SUPERFAMILY SSF54211 6 130 1.97E-47 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS08135 3c685ddffba3fe9648e11e5441128be5 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 32.471 T 05-07-2017 IPR023035 Ribosomal protein S9, bacterial/plastid AC028_RS08135 3c685ddffba3fe9648e11e5441128be5 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 05-07-2017 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 AC028_RS13235 9fcf00714bacf90c4c2fed2f9777008c 170 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 170 22.571 T 05-07-2017 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AC028_RS13235 9fcf00714bacf90c4c2fed2f9777008c 170 Pfam PF01782 RimM N-terminal domain 10 92 1.0E-20 T 05-07-2017 IPR002676 RimM protein GO:0006364 AC028_RS13235 9fcf00714bacf90c4c2fed2f9777008c 170 SUPERFAMILY SSF50346 101 170 4.32E-17 T 05-07-2017 IPR011033 PRC-barrel-like AC028_RS13235 9fcf00714bacf90c4c2fed2f9777008c 170 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 169 6.4E-52 T 05-07-2017 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AC028_RS13235 9fcf00714bacf90c4c2fed2f9777008c 170 Gene3D G3DSA:2.40.30.60 1 95 1.2E-25 T 05-07-2017 IPR002676 RimM protein GO:0006364 AC028_RS13235 9fcf00714bacf90c4c2fed2f9777008c 170 SUPERFAMILY SSF50447 8 95 2.01E-18 T 05-07-2017 IPR009000 Translation protein, beta-barrel domain AC028_RS13235 9fcf00714bacf90c4c2fed2f9777008c 170 Gene3D G3DSA:2.30.30.240 101 170 1.2E-24 T 05-07-2017 AC028_RS13235 9fcf00714bacf90c4c2fed2f9777008c 170 Pfam PF05239 PRC-barrel domain 98 165 1.0E-5 T 05-07-2017 IPR027275 PRC-barrel domain AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 SUPERFAMILY SSF82866 797 1017 4.97E-41 T 05-07-2017 AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 Pfam PF00873 AcrB/AcrD/AcrF family 5 1017 3.7E-286 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 SUPERFAMILY SSF82714 182 265 2.35E-15 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 SUPERFAMILY SSF82693 560 650 1.78E-5 T 05-07-2017 AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 SUPERFAMILY SSF82866 290 492 6.54E-44 T 05-07-2017 AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 SUPERFAMILY SSF82693 40 134 1.17E-21 T 05-07-2017 AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 SUPERFAMILY SSF82693 135 181 5.36E-21 T 05-07-2017 AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 SUPERFAMILY SSF82693 268 324 5.36E-21 T 05-07-2017 AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 Gene3D G3DSA:3.30.70.1430 40 139 6.2E-26 T 05-07-2017 AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 6.6E-60 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 PRINTS PR00702 Acriflavin resistance protein family signature 547 564 6.6E-60 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 6.6E-60 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.6E-60 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 6.6E-60 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 6.6E-60 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.6E-60 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 6.6E-60 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 Gene3D G3DSA:3.30.2090.10 715 793 3.7E-17 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 Gene3D G3DSA:3.30.2090.10 181 266 5.2E-17 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 Gene3D G3DSA:1.10.3850.10 803 1017 2.5E-46 T 05-07-2017 AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 Gene3D G3DSA:1.10.3850.10 275 494 6.2E-54 T 05-07-2017 AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 SUPERFAMILY SSF82714 715 795 1.09E-16 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS13800 a5b7f274455924cce7ed2c137491a22b 1049 Gene3D G3DSA:3.30.70.1440 664 710 4.6E-7 T 05-07-2017 AC028_RS13765 ac9a6715bfc307ad885b105cb84d736a 250 SUPERFAMILY SSF56784 11 222 8.88E-26 T 05-07-2017 IPR023214 HAD-like domain AC028_RS13765 ac9a6715bfc307ad885b105cb84d736a 250 Pfam PF13419 Haloacid dehalogenase-like hydrolase 17 193 3.7E-7 T 05-07-2017 IPR023214 HAD-like domain AC028_RS13765 ac9a6715bfc307ad885b105cb84d736a 250 Gene3D G3DSA:1.10.150.240 27 96 5.8E-31 T 05-07-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 AC028_RS13765 ac9a6715bfc307ad885b105cb84d736a 250 Gene3D G3DSA:3.40.50.1000 97 240 1.4E-43 T 05-07-2017 IPR023214 HAD-like domain AC028_RS20350 2190f61ac0a4478b32640b42ceca3339 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 05-07-2017 IPR019844 Cold-shock conserved site AC028_RS20350 2190f61ac0a4478b32640b42ceca3339 69 PRINTS PR00050 Cold shock protein signature 7 22 2.5E-16 T 05-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AC028_RS20350 2190f61ac0a4478b32640b42ceca3339 69 PRINTS PR00050 Cold shock protein signature 42 60 2.5E-16 T 05-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AC028_RS20350 2190f61ac0a4478b32640b42ceca3339 69 PRINTS PR00050 Cold shock protein signature 27 36 2.5E-16 T 05-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AC028_RS20350 2190f61ac0a4478b32640b42ceca3339 69 SUPERFAMILY SSF50249 4 68 1.31E-23 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS20350 2190f61ac0a4478b32640b42ceca3339 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 7.2E-28 T 05-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AC028_RS20350 2190f61ac0a4478b32640b42ceca3339 69 PIRSF PIRSF002599 1 69 1.7E-21 T 05-07-2017 IPR012156 Cold shock, CspA GO:0003676 AC028_RS20350 2190f61ac0a4478b32640b42ceca3339 69 SMART SM00357 6 69 1.0E-27 T 05-07-2017 IPR011129 Cold shock protein GO:0003676 AC028_RS20350 2190f61ac0a4478b32640b42ceca3339 69 Gene3D G3DSA:2.40.50.140 5 67 1.4E-29 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS02565 f5fdbd548f9779f02c5523e6518b3991 203 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 05-07-2017 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AC028_RS02565 f5fdbd548f9779f02c5523e6518b3991 203 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 2.0E-70 T 05-07-2017 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AC028_RS02565 f5fdbd548f9779f02c5523e6518b3991 203 SUPERFAMILY SSF52540 2 187 3.6E-60 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02565 f5fdbd548f9779f02c5523e6518b3991 203 Gene3D G3DSA:3.30.63.10 33 84 1.4E-21 T 05-07-2017 AC028_RS02565 f5fdbd548f9779f02c5523e6518b3991 203 Gene3D G3DSA:3.40.50.300 2 25 1.6E-44 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02565 f5fdbd548f9779f02c5523e6518b3991 203 Gene3D G3DSA:3.40.50.300 85 200 1.6E-44 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02565 f5fdbd548f9779f02c5523e6518b3991 203 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 35.625 T 05-07-2017 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AC028_RS02565 f5fdbd548f9779f02c5523e6518b3991 203 SMART SM00072 2 184 3.6E-58 T 05-07-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AC028_RS02565 f5fdbd548f9779f02c5523e6518b3991 203 Pfam PF00625 Guanylate kinase 4 180 7.8E-47 T 05-07-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AC028_RS19340 6a591cbfbed63fb2022a635a50d10d02 425 SUPERFAMILY SSF47090 365 423 8.16E-16 T 05-07-2017 IPR002477 Peptidoglycan binding-like AC028_RS19340 6a591cbfbed63fb2022a635a50d10d02 425 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 52 348 9.7E-112 T 05-07-2017 IPR011970 Lytic murein transglycosylase AC028_RS19340 6a591cbfbed63fb2022a635a50d10d02 425 Gene3D G3DSA:1.10.101.10 366 423 1.5E-13 T 05-07-2017 IPR002477 Peptidoglycan binding-like AC028_RS19340 6a591cbfbed63fb2022a635a50d10d02 425 Pfam PF01471 Putative peptidoglycan binding domain 368 422 2.5E-11 T 05-07-2017 IPR002477 Peptidoglycan binding-like AC028_RS19340 6a591cbfbed63fb2022a635a50d10d02 425 Gene3D G3DSA:1.10.530.10 235 350 2.0E-54 T 05-07-2017 AC028_RS19340 6a591cbfbed63fb2022a635a50d10d02 425 Gene3D G3DSA:1.10.530.10 96 153 2.0E-54 T 05-07-2017 AC028_RS19340 6a591cbfbed63fb2022a635a50d10d02 425 SUPERFAMILY SSF53955 50 350 2.63E-92 T 05-07-2017 IPR023346 Lysozyme-like domain AC028_RS19340 6a591cbfbed63fb2022a635a50d10d02 425 Pfam PF13406 Transglycosylase SLT domain 52 345 2.3E-104 T 05-07-2017 IPR031304 Transglycosylase SLT domain 2 AC028_RS18045 74a4f8c502ef380e629f422ecc803a58 922 Gene3D G3DSA:3.20.19.10 661 916 3.6E-76 T 05-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AC028_RS18045 74a4f8c502ef380e629f422ecc803a58 922 Pfam PF00330 Aconitase family (aconitate hydratase) 67 585 3.7E-182 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS18045 74a4f8c502ef380e629f422ecc803a58 922 SUPERFAMILY SSF52016 654 916 6.87E-84 T 05-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AC028_RS18045 74a4f8c502ef380e629f422ecc803a58 922 ProSitePatterns PS01244 Aconitase family signature 2. 516 529 - T 05-07-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AC028_RS18045 74a4f8c502ef380e629f422ecc803a58 922 ProSitePatterns PS00450 Aconitase family signature 1. 450 466 - T 05-07-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AC028_RS18045 74a4f8c502ef380e629f422ecc803a58 922 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 16 916 0.0 T 05-07-2017 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 AC028_RS18045 74a4f8c502ef380e629f422ecc803a58 922 Pfam PF00694 Aconitase C-terminal domain 715 846 6.6E-45 T 05-07-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS18045 74a4f8c502ef380e629f422ecc803a58 922 Gene3D G3DSA:3.30.499.10 368 392 4.2E-63 T 05-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS18045 74a4f8c502ef380e629f422ecc803a58 922 Gene3D G3DSA:3.30.499.10 442 598 4.2E-63 T 05-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS18045 74a4f8c502ef380e629f422ecc803a58 922 PRINTS PR00415 Aconitase family signature 215 230 5.5E-41 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS18045 74a4f8c502ef380e629f422ecc803a58 922 PRINTS PR00415 Aconitase family signature 291 304 5.5E-41 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS18045 74a4f8c502ef380e629f422ecc803a58 922 PRINTS PR00415 Aconitase family signature 371 385 5.5E-41 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS18045 74a4f8c502ef380e629f422ecc803a58 922 PRINTS PR00415 Aconitase family signature 454 465 5.5E-41 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS18045 74a4f8c502ef380e629f422ecc803a58 922 PRINTS PR00415 Aconitase family signature 201 214 5.5E-41 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS18045 74a4f8c502ef380e629f422ecc803a58 922 PRINTS PR00415 Aconitase family signature 144 157 5.5E-41 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS18045 74a4f8c502ef380e629f422ecc803a58 922 PRINTS PR00415 Aconitase family signature 277 290 5.5E-41 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS18045 74a4f8c502ef380e629f422ecc803a58 922 PRINTS PR00415 Aconitase family signature 168 176 5.5E-41 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS18045 74a4f8c502ef380e629f422ecc803a58 922 PRINTS PR00415 Aconitase family signature 516 529 5.5E-41 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS18045 74a4f8c502ef380e629f422ecc803a58 922 Gene3D G3DSA:3.40.1060.10 248 366 2.9E-36 T 05-07-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS18045 74a4f8c502ef380e629f422ecc803a58 922 Gene3D G3DSA:3.30.499.10 29 247 2.4E-76 T 05-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS18045 74a4f8c502ef380e629f422ecc803a58 922 SUPERFAMILY SSF53732 3 649 9.42E-224 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS07645 d01dc167756dca0c7513e77cac978da6 212 Gene3D G3DSA:3.40.50.150 21 211 8.0E-62 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS07645 d01dc167756dca0c7513e77cac978da6 212 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 32 211 5.4E-53 T 05-07-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AC028_RS07645 d01dc167756dca0c7513e77cac978da6 212 PIRSF PIRSF003078 1 212 1.7E-72 T 05-07-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AC028_RS07645 d01dc167756dca0c7513e77cac978da6 212 SUPERFAMILY SSF53335 22 210 1.45E-35 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS07645 d01dc167756dca0c7513e77cac978da6 212 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 20 208 26.451 T 05-07-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AC028_RS07645 d01dc167756dca0c7513e77cac978da6 212 Pfam PF02527 rRNA small subunit methyltransferase G 31 207 5.1E-52 T 05-07-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AC028_RS21455 e905a3b891d185315fb713cb9b22ef89 172 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 1.3E-9 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS21455 e905a3b891d185315fb713cb9b22ef89 172 Pfam PF12019 Type II transport protein GspH 46 162 3.6E-15 T 05-07-2017 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AC028_RS21455 e905a3b891d185315fb713cb9b22ef89 172 Pfam PF13633 Prokaryotic N-terminal methylation site 7 32 2.6E-11 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS21455 e905a3b891d185315fb713cb9b22ef89 172 Gene3D G3DSA:3.30.700.10 9 48 1.5E-7 T 05-07-2017 AC028_RS21455 e905a3b891d185315fb713cb9b22ef89 172 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS21455 e905a3b891d185315fb713cb9b22ef89 172 SUPERFAMILY SSF54523 9 138 3.69E-22 T 05-07-2017 AC028_RS09570 57d1a84522c207140e05abca228c234c 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 05-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AC028_RS09570 57d1a84522c207140e05abca228c234c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.8E-26 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS09570 57d1a84522c207140e05abca228c234c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.8E-26 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS09570 57d1a84522c207140e05abca228c234c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.8E-26 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS09570 57d1a84522c207140e05abca228c234c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.8E-26 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS09570 57d1a84522c207140e05abca228c234c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.8E-26 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS09570 57d1a84522c207140e05abca228c234c 244 Gene3D G3DSA:3.40.50.720 2 231 1.1E-61 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS09570 57d1a84522c207140e05abca228c234c 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 189 0.0072 T 05-07-2017 AC028_RS09570 57d1a84522c207140e05abca228c234c 244 SUPERFAMILY SSF51735 2 236 1.65E-61 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS09570 57d1a84522c207140e05abca228c234c 244 Pfam PF00106 short chain dehydrogenase 6 194 3.1E-51 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS09570 57d1a84522c207140e05abca228c234c 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 6.0E-9 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS09570 57d1a84522c207140e05abca228c234c 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 6.0E-9 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS09570 57d1a84522c207140e05abca228c234c 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 6.0E-9 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS00700 2fa8862abe39cb2de958c32387608ed4 250 Pfam PF03421 YopJ Serine/Threonine acetyltransferase 1 169 6.1E-18 T 05-07-2017 IPR005083 Serine/Threonine acetyltransferase, YopJ AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 Gene3D G3DSA:1.10.10.10 459 510 7.6E-28 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 Pfam PF04545 Sigma-70, region 4 554 607 1.5E-19 T 05-07-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 Pfam PF04539 Sigma-70 region 3 465 541 1.1E-30 T 05-07-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 Pfam PF00140 Sigma-70 factor, region 1.2 104 135 4.4E-13 T 05-07-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 382 607 1.5E-39 T 05-07-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 Pfam PF04542 Sigma-70 region 2 386 455 1.7E-21 T 05-07-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 SUPERFAMILY SSF88659 459 532 2.94E-21 T 05-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 PRINTS PR00046 Major sigma-70 factor signature 579 594 3.2E-31 T 05-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 PRINTS PR00046 Major sigma-70 factor signature 434 442 3.2E-31 T 05-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 PRINTS PR00046 Major sigma-70 factor signature 594 605 3.2E-31 T 05-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 PRINTS PR00046 Major sigma-70 factor signature 558 570 3.2E-31 T 05-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 PRINTS PR00046 Major sigma-70 factor signature 410 423 3.2E-31 T 05-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 Gene3D G3DSA:1.10.10.10 549 619 1.8E-33 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 Pfam PF03979 Sigma-70 factor, region 1.1 8 87 9.9E-29 T 05-07-2017 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 410 423 - T 05-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 Gene3D G3DSA:1.10.601.10 118 455 1.5E-121 T 05-07-2017 AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 SUPERFAMILY SSF88946 121 453 5.65E-99 T 05-07-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 7 619 45.671 T 05-07-2017 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 SUPERFAMILY SSF88659 516 618 1.74E-27 T 05-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 Pfam PF04546 Sigma-70, non-essential region 145 354 5.5E-51 T 05-07-2017 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 579 605 - T 05-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS14085 8dad5998de8a8cad45667f06674cbdc0 621 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 382 618 1.0E-121 T 05-07-2017 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AC028_RS02545 b3566bc6ca20f8359c658157de304e3a 305 SMART SM01130 14 302 1.6E-65 T 05-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AC028_RS02545 b3566bc6ca20f8359c658157de304e3a 305 Pfam PF00701 Dihydrodipicolinate synthetase family 16 301 8.9E-48 T 05-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AC028_RS02545 b3566bc6ca20f8359c658157de304e3a 305 TIGRFAM TIGR03249 KdgD: 5-dehydro-4-deoxyglucarate dehydratase 7 301 1.2E-126 T 05-07-2017 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 AC028_RS02545 b3566bc6ca20f8359c658157de304e3a 305 SUPERFAMILY SSF51569 16 301 1.15E-65 T 05-07-2017 AC028_RS02545 b3566bc6ca20f8359c658157de304e3a 305 Hamap MF_00694 Probable 5-dehydro-4-deoxyglucarate dehydratase. 8 305 48.963 T 05-07-2017 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 AC028_RS02545 b3566bc6ca20f8359c658157de304e3a 305 PIRSF PIRSF001365 11 304 1.7E-55 T 05-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AC028_RS02545 b3566bc6ca20f8359c658157de304e3a 305 Gene3D G3DSA:3.20.20.70 16 301 8.6E-77 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS16865 3bb38771ecb0690a61e10adf1e68393a 555 Pfam PF01175 Urocanase 10 545 1.0E-257 T 05-07-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AC028_RS16865 3bb38771ecb0690a61e10adf1e68393a 555 ProSitePatterns PS01233 Urocanase signature. 440 455 - T 05-07-2017 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AC028_RS16865 3bb38771ecb0690a61e10adf1e68393a 555 Hamap MF_00577 Urocanate hydratase [hutU]. 3 554 49.81 T 05-07-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AC028_RS16865 3bb38771ecb0690a61e10adf1e68393a 555 SUPERFAMILY SSF111326 4 552 2.49E-257 T 05-07-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AC028_RS16865 3bb38771ecb0690a61e10adf1e68393a 555 TIGRFAM TIGR01228 hutU: urocanate hydratase 9 551 6.9E-285 T 05-07-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AC028_RS16865 3bb38771ecb0690a61e10adf1e68393a 555 Gene3D G3DSA:3.40.50.10730 141 347 9.4E-91 T 05-07-2017 AC028_RS16865 3bb38771ecb0690a61e10adf1e68393a 555 Gene3D G3DSA:3.40.1770.10 7 139 1.8E-160 T 05-07-2017 AC028_RS16865 3bb38771ecb0690a61e10adf1e68393a 555 Gene3D G3DSA:3.40.1770.10 358 552 1.8E-160 T 05-07-2017 AC028_RS16865 3bb38771ecb0690a61e10adf1e68393a 555 PIRSF PIRSF001423 1 555 1.1E-287 T 05-07-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AC028_RS00545 96292a21dfd231e2ce3c1b44409057f9 453 SUPERFAMILY SSF161093 280 451 2.35E-49 T 05-07-2017 AC028_RS00545 96292a21dfd231e2ce3c1b44409057f9 453 SMART SM00924 36 139 1.1E-37 T 05-07-2017 IPR006668 Magnesium transporter, MgtE intracellular domain AC028_RS00545 96292a21dfd231e2ce3c1b44409057f9 453 Gene3D G3DSA:3.10.580.10 130 264 2.5E-15 T 05-07-2017 AC028_RS00545 96292a21dfd231e2ce3c1b44409057f9 453 Pfam PF03448 MgtE intracellular N domain 37 137 1.8E-27 T 05-07-2017 IPR006668 Magnesium transporter, MgtE intracellular domain AC028_RS00545 96292a21dfd231e2ce3c1b44409057f9 453 Pfam PF00571 CBS domain 221 257 9.3E-4 T 05-07-2017 IPR000644 CBS domain AC028_RS00545 96292a21dfd231e2ce3c1b44409057f9 453 Gene3D G3DSA:1.25.60.10 10 129 3.5E-25 T 05-07-2017 AC028_RS00545 96292a21dfd231e2ce3c1b44409057f9 453 SUPERFAMILY SSF54631 138 277 2.15E-25 T 05-07-2017 AC028_RS00545 96292a21dfd231e2ce3c1b44409057f9 453 Gene3D G3DSA:1.10.357.20 282 451 4.3E-52 T 05-07-2017 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AC028_RS00545 96292a21dfd231e2ce3c1b44409057f9 453 SUPERFAMILY SSF158791 13 136 9.29E-30 T 05-07-2017 AC028_RS00545 96292a21dfd231e2ce3c1b44409057f9 453 TIGRFAM TIGR00400 mgtE: magnesium transporter 21 451 5.6E-87 T 05-07-2017 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AC028_RS00545 96292a21dfd231e2ce3c1b44409057f9 453 Pfam PF01769 Divalent cation transporter 323 444 5.4E-26 T 05-07-2017 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AC028_RS04320 5b2ca43229576e0744e0b3ae02b3131d 307 PRINTS PR00116 Arginase signature 97 112 9.0E-45 T 05-07-2017 IPR006035 Ureohydrolase GO:0046872 AC028_RS04320 5b2ca43229576e0744e0b3ae02b3131d 307 PRINTS PR00116 Arginase signature 261 275 9.0E-45 T 05-07-2017 IPR006035 Ureohydrolase GO:0046872 AC028_RS04320 5b2ca43229576e0744e0b3ae02b3131d 307 PRINTS PR00116 Arginase signature 226 255 9.0E-45 T 05-07-2017 IPR006035 Ureohydrolase GO:0046872 AC028_RS04320 5b2ca43229576e0744e0b3ae02b3131d 307 PRINTS PR00116 Arginase signature 124 151 9.0E-45 T 05-07-2017 IPR006035 Ureohydrolase GO:0046872 AC028_RS04320 5b2ca43229576e0744e0b3ae02b3131d 307 PRINTS PR00116 Arginase signature 178 196 9.0E-45 T 05-07-2017 IPR006035 Ureohydrolase GO:0046872 AC028_RS04320 5b2ca43229576e0744e0b3ae02b3131d 307 Pfam PF00491 Arginase family 8 299 5.5E-76 T 05-07-2017 IPR006035 Ureohydrolase GO:0046872 AC028_RS04320 5b2ca43229576e0744e0b3ae02b3131d 307 Gene3D G3DSA:3.40.800.10 7 301 1.4E-88 T 05-07-2017 IPR023696 Ureohydrolase domain AC028_RS04320 5b2ca43229576e0744e0b3ae02b3131d 307 TIGRFAM TIGR01229 rocF_arginase: arginase 9 303 3.3E-88 T 05-07-2017 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 AC028_RS04320 5b2ca43229576e0744e0b3ae02b3131d 307 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 05-07-2017 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AC028_RS04320 5b2ca43229576e0744e0b3ae02b3131d 307 SUPERFAMILY SSF52768 8 302 2.88E-90 T 05-07-2017 AC028_RS04320 5b2ca43229576e0744e0b3ae02b3131d 307 PIRSF PIRSF036979 2 303 8.8E-34 T 05-07-2017 IPR006035 Ureohydrolase GO:0046872 AC028_RS17020 4f3986f83c977448ab987b91641fb601 690 Pfam PF08448 PAS fold 163 270 4.4E-21 T 05-07-2017 IPR013656 PAS fold-4 AC028_RS17020 4f3986f83c977448ab987b91641fb601 690 SMART SM00448 570 682 3.6E-19 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS17020 4f3986f83c977448ab987b91641fb601 690 SMART SM00387 425 550 8.1E-27 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS17020 4f3986f83c977448ab987b91641fb601 690 SUPERFAMILY SSF52172 569 687 1.57E-25 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS17020 4f3986f83c977448ab987b91641fb601 690 Pfam PF00512 His Kinase A (phospho-acceptor) domain 317 383 9.9E-8 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS17020 4f3986f83c977448ab987b91641fb601 690 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 426 548 1.2E-17 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS17020 4f3986f83c977448ab987b91641fb601 690 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 271 5.7E-11 T 05-07-2017 IPR000014 PAS domain AC028_RS17020 4f3986f83c977448ab987b91641fb601 690 SUPERFAMILY SSF55785 143 267 3.63E-24 T 05-07-2017 IPR000014 PAS domain AC028_RS17020 4f3986f83c977448ab987b91641fb601 690 SMART SM00388 316 384 3.9E-6 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS17020 4f3986f83c977448ab987b91641fb601 690 Gene3D G3DSA:3.30.450.20 148 267 1.2E-22 T 05-07-2017 AC028_RS17020 4f3986f83c977448ab987b91641fb601 690 SUPERFAMILY SSF47384 299 382 7.26E-11 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS17020 4f3986f83c977448ab987b91641fb601 690 SMART SM00091 156 222 3.5E-6 T 05-07-2017 IPR000014 PAS domain AC028_RS17020 4f3986f83c977448ab987b91641fb601 690 Gene3D G3DSA:3.30.565.10 384 547 5.6E-38 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS17020 4f3986f83c977448ab987b91641fb601 690 Pfam PF00072 Response regulator receiver domain 572 677 7.6E-16 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS17020 4f3986f83c977448ab987b91641fb601 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 547 6.5E-16 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS17020 4f3986f83c977448ab987b91641fb601 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 510 528 6.5E-16 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS17020 4f3986f83c977448ab987b91641fb601 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 507 6.5E-16 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS17020 4f3986f83c977448ab987b91641fb601 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 493 6.5E-16 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS17020 4f3986f83c977448ab987b91641fb601 690 Gene3D G3DSA:3.40.50.2300 568 687 1.0E-29 T 05-07-2017 AC028_RS17020 4f3986f83c977448ab987b91641fb601 690 SUPERFAMILY SSF55874 375 548 3.27E-38 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS17020 4f3986f83c977448ab987b91641fb601 690 Gene3D G3DSA:1.10.287.130 309 380 1.6E-5 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS14520 42bac373aa3a1300d3611e10cf3302a8 136 Pfam PF07681 DoxX 16 96 2.4E-18 T 05-07-2017 IPR032808 DoxX family AC028_RS10930 8912c3d41b99c26b95b09b83e4169dd2 199 ProSitePatterns PS00211 ABC transporters family signature. 114 128 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS10930 8912c3d41b99c26b95b09b83e4169dd2 199 Pfam PF00005 ABC transporter 1 141 6.1E-31 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS10930 8912c3d41b99c26b95b09b83e4169dd2 199 SUPERFAMILY SSF52540 1 195 2.41E-60 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10930 8912c3d41b99c26b95b09b83e4169dd2 199 SMART SM00382 5 187 1.3E-15 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS10930 8912c3d41b99c26b95b09b83e4169dd2 199 Gene3D G3DSA:3.40.50.300 1 195 2.0E-61 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10220 c165dbf06cb436df9d15610ece54a00f 126 SUPERFAMILY SSF54523 45 119 6.8E-15 T 05-07-2017 AC028_RS10220 c165dbf06cb436df9d15610ece54a00f 126 Gene3D G3DSA:3.30.1300.30 39 114 1.5E-16 T 05-07-2017 AC028_RS10220 c165dbf06cb436df9d15610ece54a00f 126 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS10220 c165dbf06cb436df9d15610ece54a00f 126 Pfam PF13633 Prokaryotic N-terminal methylation site 11 35 4.5E-7 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS10220 c165dbf06cb436df9d15610ece54a00f 126 Pfam PF02501 Type II secretion system (T2SS), protein I 46 119 2.4E-16 T 05-07-2017 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 AC028_RS10220 c165dbf06cb436df9d15610ece54a00f 126 TIGRFAM TIGR01707 gspI: type II secretion system protein I 12 108 8.2E-23 T 05-07-2017 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 AC028_RS10220 c165dbf06cb436df9d15610ece54a00f 126 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 32 2.7E-5 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS14380 0ba3e4f60bc175762345f19e0803de56 340 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 7 215 2.1E-43 T 05-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AC028_RS14380 0ba3e4f60bc175762345f19e0803de56 340 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 326 3.2E-93 T 05-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AC028_RS20755 a5772b0fecf803da4b5dad6852bf70ac 328 SMART SM00448 4 116 2.5E-33 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS20755 a5772b0fecf803da4b5dad6852bf70ac 328 Gene3D G3DSA:3.40.50.2300 6 127 9.3E-35 T 05-07-2017 AC028_RS20755 a5772b0fecf803da4b5dad6852bf70ac 328 SUPERFAMILY SSF109604 146 314 6.6E-35 T 05-07-2017 AC028_RS20755 a5772b0fecf803da4b5dad6852bf70ac 328 Pfam PF13487 HD domain 202 264 7.7E-18 T 05-07-2017 AC028_RS20755 a5772b0fecf803da4b5dad6852bf70ac 328 SUPERFAMILY SSF52172 3 131 1.57E-33 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS20755 a5772b0fecf803da4b5dad6852bf70ac 328 Gene3D G3DSA:1.10.3210.10 146 314 2.1E-18 T 05-07-2017 IPR006674 HD domain AC028_RS20755 a5772b0fecf803da4b5dad6852bf70ac 328 SMART SM00471 146 283 7.1E-7 T 05-07-2017 IPR003607 HD/PDEase domain AC028_RS20755 a5772b0fecf803da4b5dad6852bf70ac 328 Pfam PF00072 Response regulator receiver domain 7 116 2.2E-23 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS10130 f7c571e9db36f4786adca4842aaad606 120 Pfam PF04972 BON domain 48 115 9.8E-19 T 05-07-2017 IPR007055 BON domain AC028_RS10130 f7c571e9db36f4786adca4842aaad606 120 SMART SM00749 53 116 4.5E-9 T 05-07-2017 IPR014004 Transport-associated and nodulation domain, bacteria AC028_RS07895 5edfff7aea34e0c02fcffcf2d5c3991c 205 Gene3D G3DSA:1.10.357.10 11 184 1.1E-27 T 05-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AC028_RS07895 5edfff7aea34e0c02fcffcf2d5c3991c 205 SUPERFAMILY SSF48498 90 184 1.45E-7 T 05-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AC028_RS07895 5edfff7aea34e0c02fcffcf2d5c3991c 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 4.0E-5 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS07895 5edfff7aea34e0c02fcffcf2d5c3991c 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 4.0E-5 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS07895 5edfff7aea34e0c02fcffcf2d5c3991c 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 65 4.9E-11 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS07895 5edfff7aea34e0c02fcffcf2d5c3991c 205 SUPERFAMILY SSF46689 12 95 1.03E-15 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS18090 98af0ddfdf4e0e155eee57b2e5c599c5 795 SMART SM00304 439 491 13.0 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18090 98af0ddfdf4e0e155eee57b2e5c599c5 795 SMART SM00304 215 267 2.0E-9 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18090 98af0ddfdf4e0e155eee57b2e5c599c5 795 SUPERFAMILY SSF58104 459 740 7.98E-72 T 05-07-2017 AC028_RS18090 98af0ddfdf4e0e155eee57b2e5c599c5 795 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 544 738 1.7E-62 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18090 98af0ddfdf4e0e155eee57b2e5c599c5 795 SUPERFAMILY SSF158472 215 266 1.31E-8 T 05-07-2017 AC028_RS18090 98af0ddfdf4e0e155eee57b2e5c599c5 795 Gene3D G3DSA:1.10.287.950 507 711 4.2E-62 T 05-07-2017 AC028_RS18090 98af0ddfdf4e0e155eee57b2e5c599c5 795 Pfam PF00672 HAMP domain 196 263 3.5E-14 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18090 98af0ddfdf4e0e155eee57b2e5c599c5 795 SUPERFAMILY SSF55785 261 387 2.09E-6 T 05-07-2017 IPR000014 PAS domain AC028_RS18090 98af0ddfdf4e0e155eee57b2e5c599c5 795 Pfam PF12729 Four helix bundle sensory module for signal transduction 8 185 1.4E-14 T 05-07-2017 IPR024478 4HB MCP domain AC028_RS18090 98af0ddfdf4e0e155eee57b2e5c599c5 795 Gene3D G3DSA:3.30.450.20 261 384 1.2E-6 T 05-07-2017 AC028_RS18090 98af0ddfdf4e0e155eee57b2e5c599c5 795 SMART SM00283 492 739 1.5E-92 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS11315 ea28739e6719f4eae793779e0cbc3487 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 9.1E-96 T 05-07-2017 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AC028_RS11315 ea28739e6719f4eae793779e0cbc3487 187 Pfam PF00578 AhpC/TSA family 4 132 2.4E-30 T 05-07-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AC028_RS11315 ea28739e6719f4eae793779e0cbc3487 187 SUPERFAMILY SSF52833 1 186 1.59E-51 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS11315 ea28739e6719f4eae793779e0cbc3487 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 3.8E-5 T 05-07-2017 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AC028_RS11315 ea28739e6719f4eae793779e0cbc3487 187 Gene3D G3DSA:3.40.30.10 4 183 1.6E-58 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS11315 ea28739e6719f4eae793779e0cbc3487 187 PIRSF PIRSF000239 1 187 6.1E-46 T 05-07-2017 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AC028_RS17470 283c47060bf39933962d1341b501f888 208 Gene3D G3DSA:3.30.70.260 53 116 5.3E-11 T 05-07-2017 AC028_RS17470 283c47060bf39933962d1341b501f888 208 Pfam PF13740 ACT domain 36 109 2.7E-13 T 05-07-2017 AC028_RS17470 283c47060bf39933962d1341b501f888 208 Gene3D G3DSA:3.30.70.260 121 207 6.1E-20 T 05-07-2017 AC028_RS17470 283c47060bf39933962d1341b501f888 208 PIRSF PIRSF028103 33 208 1.8E-69 T 05-07-2017 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AC028_RS17470 283c47060bf39933962d1341b501f888 208 SUPERFAMILY SSF55021 119 207 9.87E-19 T 05-07-2017 AC028_RS17470 283c47060bf39933962d1341b501f888 208 SUPERFAMILY SSF55021 32 115 1.25E-9 T 05-07-2017 AC028_RS04480 2541b38c5c54a6d54a2f939ec4f02206 250 Pfam PF01223 DNA/RNA non-specific endonuclease 39 233 5.8E-44 T 05-07-2017 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 AC028_RS04480 2541b38c5c54a6d54a2f939ec4f02206 250 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 111 119 - T 05-07-2017 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 AC028_RS04480 2541b38c5c54a6d54a2f939ec4f02206 250 SMART SM00477 50 239 7.1E-26 T 05-07-2017 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 AC028_RS04480 2541b38c5c54a6d54a2f939ec4f02206 250 Gene3D G3DSA:3.40.570.10 24 243 4.2E-55 T 05-07-2017 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 AC028_RS04480 2541b38c5c54a6d54a2f939ec4f02206 250 SMART SM00892 49 239 9.1E-36 T 05-07-2017 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 AC028_RS04480 2541b38c5c54a6d54a2f939ec4f02206 250 SUPERFAMILY SSF54060 26 247 2.53E-57 T 05-07-2017 AC028_RS19255 bb0e9904713b6fe7c48740b9a7f09cc6 420 Gene3D G3DSA:3.50.50.60 7 193 2.7E-34 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19255 bb0e9904713b6fe7c48740b9a7f09cc6 420 Gene3D G3DSA:3.50.50.60 351 404 2.7E-34 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19255 bb0e9904713b6fe7c48740b9a7f09cc6 420 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 29 409 5.5E-185 T 05-07-2017 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 AC028_RS19255 bb0e9904713b6fe7c48740b9a7f09cc6 420 Pfam PF03486 HI0933-like protein 9 403 1.7E-105 T 05-07-2017 AC028_RS19255 bb0e9904713b6fe7c48740b9a7f09cc6 420 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 10 403 3.4E-99 T 05-07-2017 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AC028_RS19255 bb0e9904713b6fe7c48740b9a7f09cc6 420 SUPERFAMILY SSF51905 349 408 1.41E-39 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19255 bb0e9904713b6fe7c48740b9a7f09cc6 420 SUPERFAMILY SSF51905 9 197 1.41E-39 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19255 bb0e9904713b6fe7c48740b9a7f09cc6 420 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 6.7E-5 T 05-07-2017 AC028_RS19255 bb0e9904713b6fe7c48740b9a7f09cc6 420 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 370 385 6.7E-5 T 05-07-2017 AC028_RS19255 bb0e9904713b6fe7c48740b9a7f09cc6 420 SUPERFAMILY SSF160996 194 349 3.27E-8 T 05-07-2017 AC028_RS10830 c59318916c917afd19f465d4203a9fe9 403 Gene3D G3DSA:3.30.300.10 134 235 2.0E-38 T 05-07-2017 AC028_RS10830 c59318916c917afd19f465d4203a9fe9 403 Gene3D G3DSA:3.30.300.10 11 133 7.6E-48 T 05-07-2017 AC028_RS10830 c59318916c917afd19f465d4203a9fe9 403 SUPERFAMILY SSF55973 110 234 3.92E-47 T 05-07-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AC028_RS10830 c59318916c917afd19f465d4203a9fe9 403 SUPERFAMILY SSF55973 3 109 5.89E-46 T 05-07-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AC028_RS10830 c59318916c917afd19f465d4203a9fe9 403 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 235 371 3.4E-68 T 05-07-2017 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AC028_RS10830 c59318916c917afd19f465d4203a9fe9 403 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 101 7.7E-42 T 05-07-2017 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AC028_RS10830 c59318916c917afd19f465d4203a9fe9 403 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 400 56.12 T 05-07-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AC028_RS10830 c59318916c917afd19f465d4203a9fe9 403 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 370 1.3E-181 T 05-07-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AC028_RS10830 c59318916c917afd19f465d4203a9fe9 403 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 05-07-2017 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AC028_RS10830 c59318916c917afd19f465d4203a9fe9 403 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 261 269 - T 05-07-2017 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AC028_RS10830 c59318916c917afd19f465d4203a9fe9 403 PIRSF PIRSF000497 1 401 6.9E-170 T 05-07-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AC028_RS10830 c59318916c917afd19f465d4203a9fe9 403 SUPERFAMILY SSF55973 235 401 2.32E-67 T 05-07-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AC028_RS10830 c59318916c917afd19f465d4203a9fe9 403 Gene3D G3DSA:3.30.300.10 246 401 1.4E-70 T 05-07-2017 AC028_RS10830 c59318916c917afd19f465d4203a9fe9 403 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 233 5.6E-43 T 05-07-2017 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AC028_RS21725 927ddc0f60b0741eed35a37a5c28d4c4 689 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 237 310 8.9E-23 T 05-07-2017 IPR020012 Motility protein FimV, N-terminal AC028_RS21725 927ddc0f60b0741eed35a37a5c28d4c4 689 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 646 688 3.1E-14 T 05-07-2017 IPR020011 Motility protein FimV, C-terminal AC028_RS05920 b6a6480f120d01f41411919d08cb1893 295 Gene3D G3DSA:3.40.50.1820 5 290 2.7E-62 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS05920 b6a6480f120d01f41411919d08cb1893 295 Pfam PF00561 alpha/beta hydrolase fold 32 146 7.1E-20 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS05920 b6a6480f120d01f41411919d08cb1893 295 PRINTS PR00412 Epoxide hydrolase signature 264 286 6.2E-7 T 05-07-2017 IPR000639 Epoxide hydrolase-like GO:0003824 AC028_RS05920 b6a6480f120d01f41411919d08cb1893 295 PRINTS PR00412 Epoxide hydrolase signature 118 131 6.2E-7 T 05-07-2017 IPR000639 Epoxide hydrolase-like GO:0003824 AC028_RS05920 b6a6480f120d01f41411919d08cb1893 295 PRINTS PR00412 Epoxide hydrolase signature 38 56 6.2E-7 T 05-07-2017 IPR000639 Epoxide hydrolase-like GO:0003824 AC028_RS05920 b6a6480f120d01f41411919d08cb1893 295 PRINTS PR00111 Alpha/beta hydrolase fold signature 118 131 1.3E-5 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS05920 b6a6480f120d01f41411919d08cb1893 295 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 1.3E-5 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS05920 b6a6480f120d01f41411919d08cb1893 295 SUPERFAMILY SSF53474 8 289 9.76E-66 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS21635 18cb36fb51ea2db1921e74db8aeca1f1 157 PRINTS PR01651 Protein-export SecG membrane protein signature 24 38 4.6E-35 T 05-07-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AC028_RS21635 18cb36fb51ea2db1921e74db8aeca1f1 157 PRINTS PR01651 Protein-export SecG membrane protein signature 4 24 4.6E-35 T 05-07-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AC028_RS21635 18cb36fb51ea2db1921e74db8aeca1f1 157 PRINTS PR01651 Protein-export SecG membrane protein signature 39 55 4.6E-35 T 05-07-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AC028_RS21635 18cb36fb51ea2db1921e74db8aeca1f1 157 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 4.6E-35 T 05-07-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AC028_RS21635 18cb36fb51ea2db1921e74db8aeca1f1 157 Pfam PF03840 Preprotein translocase SecG subunit 5 72 8.2E-19 T 05-07-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AC028_RS21635 18cb36fb51ea2db1921e74db8aeca1f1 157 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 73 4.5E-22 T 05-07-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AC028_RS12265 fea79a5f1d13628377310015744bc218 191 Gene3D G3DSA:3.90.950.10 2 189 5.0E-54 T 05-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like AC028_RS12265 fea79a5f1d13628377310015744bc218 191 PIRSF PIRSF006305 1 190 5.3E-41 T 05-07-2017 IPR003697 Maf-like protein GO:0005737 AC028_RS12265 fea79a5f1d13628377310015744bc218 191 Hamap MF_00528 Septum formation protein Maf [maf]. 4 190 27.772 T 05-07-2017 IPR003697 Maf-like protein GO:0005737 AC028_RS12265 fea79a5f1d13628377310015744bc218 191 SUPERFAMILY SSF52972 1 185 3.86E-53 T 05-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like AC028_RS12265 fea79a5f1d13628377310015744bc218 191 Pfam PF02545 Maf-like protein 4 185 1.1E-40 T 05-07-2017 IPR003697 Maf-like protein GO:0005737 AC028_RS12265 fea79a5f1d13628377310015744bc218 191 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 184 2.5E-45 T 05-07-2017 IPR003697 Maf-like protein GO:0005737 AC028_RS18830 3adfe8ad275d701ae202e6472a2b635c 465 SMART SM00382 177 325 0.13 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS18830 3adfe8ad275d701ae202e6472a2b635c 465 SMART SM00382 1 148 3.8 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS18830 3adfe8ad275d701ae202e6472a2b635c 465 Gene3D G3DSA:3.30.300.20 360 435 5.6E-22 T 05-07-2017 IPR015946 K homology domain-like, alpha/beta AC028_RS18830 3adfe8ad275d701ae202e6472a2b635c 465 Gene3D G3DSA:3.40.50.300 178 359 4.0E-49 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18830 3adfe8ad275d701ae202e6472a2b635c 465 Gene3D G3DSA:3.40.50.300 3 166 1.2E-45 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18830 3adfe8ad275d701ae202e6472a2b635c 465 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 356 434 7.1E-24 T 05-07-2017 IPR032859 GTPase Der, C-terminal KH-domain-like AC028_RS18830 3adfe8ad275d701ae202e6472a2b635c 465 Pfam PF01926 50S ribosome-binding GTPase 180 298 8.2E-24 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS18830 3adfe8ad275d701ae202e6472a2b635c 465 Pfam PF01926 50S ribosome-binding GTPase 5 120 2.4E-27 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS18830 3adfe8ad275d701ae202e6472a2b635c 465 PIRSF PIRSF006485 1 442 2.5E-167 T 05-07-2017 IPR016484 GTP-binding protein EngA GO:0005525 AC028_RS18830 3adfe8ad275d701ae202e6472a2b635c 465 Hamap MF_00195 GTPase Der [der]. 2 437 36.808 T 05-07-2017 IPR016484 GTP-binding protein EngA GO:0005525 AC028_RS18830 3adfe8ad275d701ae202e6472a2b635c 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 159 6.4E-25 T 05-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AC028_RS18830 3adfe8ad275d701ae202e6472a2b635c 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 179 344 6.8E-26 T 05-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AC028_RS18830 3adfe8ad275d701ae202e6472a2b635c 465 SUPERFAMILY SSF52540 1 166 2.99E-47 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18830 3adfe8ad275d701ae202e6472a2b635c 465 SUPERFAMILY SSF52540 139 440 3.8E-62 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18830 3adfe8ad275d701ae202e6472a2b635c 465 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 434 1.3E-165 T 05-07-2017 IPR016484 GTP-binding protein EngA GO:0005525 AC028_RS18830 3adfe8ad275d701ae202e6472a2b635c 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 1.7E-8 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS18830 3adfe8ad275d701ae202e6472a2b635c 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.7E-8 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS13855 225497236055d3d8b22acac71c06910b 444 TIGRFAM TIGR00767 rho: transcription termination factor Rho 27 443 6.2E-207 T 05-07-2017 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AC028_RS13855 225497236055d3d8b22acac71c06910b 444 SMART SM00382 196 376 1.1E-6 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS13855 225497236055d3d8b22acac71c06910b 444 Hamap MF_01884 Transcription termination factor Rho [rho]. 26 444 229.011 T 05-07-2017 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AC028_RS13855 225497236055d3d8b22acac71c06910b 444 SMART SM00959 30 73 1.2E-11 T 05-07-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 AC028_RS13855 225497236055d3d8b22acac71c06910b 444 SUPERFAMILY SSF52540 116 397 2.24E-67 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS13855 225497236055d3d8b22acac71c06910b 444 SUPERFAMILY SSF50249 76 149 1.94E-25 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS13855 225497236055d3d8b22acac71c06910b 444 Pfam PF07497 Rho termination factor, RNA-binding domain 78 150 6.7E-28 T 05-07-2017 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 AC028_RS13855 225497236055d3d8b22acac71c06910b 444 Gene3D G3DSA:3.40.50.300 158 443 2.6E-105 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS13855 225497236055d3d8b22acac71c06910b 444 SMART SM00357 78 144 6.8E-15 T 05-07-2017 IPR011129 Cold shock protein GO:0003676 AC028_RS13855 225497236055d3d8b22acac71c06910b 444 Gene3D G3DSA:2.40.50.140 76 142 1.0E-30 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS13855 225497236055d3d8b22acac71c06910b 444 SUPERFAMILY SSF68912 27 72 5.1E-7 T 05-07-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 AC028_RS13855 225497236055d3d8b22acac71c06910b 444 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 186 389 1.9E-22 T 05-07-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AC028_RS13855 225497236055d3d8b22acac71c06910b 444 Pfam PF07498 Rho termination factor, N-terminal domain 30 73 3.8E-13 T 05-07-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 AC028_RS13855 225497236055d3d8b22acac71c06910b 444 Gene3D G3DSA:1.10.720.10 26 73 6.4E-16 T 05-07-2017 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 325 2.7E-56 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 455 3.5E-33 T 05-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 PIRSF PIRSF000350 1 455 1.7E-74 T 05-07-2017 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 Gene3D G3DSA:3.50.50.60 143 334 2.4E-46 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 2.4E-68 T 05-07-2017 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 2.4E-68 T 05-07-2017 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 171 196 2.4E-68 T 05-07-2017 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.4E-68 T 05-07-2017 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 2.4E-68 T 05-07-2017 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 2.4E-68 T 05-07-2017 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 2.4E-68 T 05-07-2017 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.4E-68 T 05-07-2017 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 2.4E-68 T 05-07-2017 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 SUPERFAMILY SSF55424 343 456 1.48E-34 T 05-07-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.7E-31 T 05-07-2017 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 189 3.7E-31 T 05-07-2017 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 3.7E-31 T 05-07-2017 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 3.7E-31 T 05-07-2017 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 3.7E-31 T 05-07-2017 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 05-07-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 Gene3D G3DSA:3.30.390.30 345 455 2.1E-42 T 05-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 Gene3D G3DSA:3.50.50.60 5 142 5.1E-39 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21880 442281815594dc668aa87d5943c259bc 456 SUPERFAMILY SSF51905 7 373 2.38E-52 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS00515 3086e6a4e21ce9d3e6f54f426bedb0dd 316 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 6 309 1.2E-100 T 05-07-2017 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 AC028_RS00515 3086e6a4e21ce9d3e6f54f426bedb0dd 316 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 4 314 35.969 T 05-07-2017 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 AC028_RS00515 3086e6a4e21ce9d3e6f54f426bedb0dd 316 Gene3D G3DSA:3.40.50.300 138 313 2.6E-56 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS00515 3086e6a4e21ce9d3e6f54f426bedb0dd 316 Pfam PF02603 HPr Serine kinase N terminus 5 132 4.8E-23 T 05-07-2017 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 AC028_RS00515 3086e6a4e21ce9d3e6f54f426bedb0dd 316 SUPERFAMILY SSF53795 137 306 5.19E-32 T 05-07-2017 AC028_RS00515 3086e6a4e21ce9d3e6f54f426bedb0dd 316 SUPERFAMILY SSF75138 10 136 4.05E-30 T 05-07-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like AC028_RS00515 3086e6a4e21ce9d3e6f54f426bedb0dd 316 Gene3D G3DSA:3.40.1390.20 10 135 4.8E-28 T 05-07-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like AC028_RS00515 3086e6a4e21ce9d3e6f54f426bedb0dd 316 Pfam PF07475 HPr Serine kinase C-terminal domain 135 306 1.6E-56 T 05-07-2017 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 AC028_RS09295 230d86cb3c6a4ca62abf9992bfa854b0 394 ProSitePatterns PS00591 Glycosyl hydrolases family 10 (GH10) active site. 268 278 - T 05-07-2017 IPR031158 Glycosyl hydrolases family 10, active site MetaCyc: PWY-6784 AC028_RS09295 230d86cb3c6a4ca62abf9992bfa854b0 394 PRINTS PR00134 Glycosyl hydrolase family 10 signature 112 124 2.0E-15 T 05-07-2017 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 AC028_RS09295 230d86cb3c6a4ca62abf9992bfa854b0 394 PRINTS PR00134 Glycosyl hydrolase family 10 signature 206 217 2.0E-15 T 05-07-2017 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 AC028_RS09295 230d86cb3c6a4ca62abf9992bfa854b0 394 PRINTS PR00134 Glycosyl hydrolase family 10 signature 234 246 2.0E-15 T 05-07-2017 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 AC028_RS09295 230d86cb3c6a4ca62abf9992bfa854b0 394 PRINTS PR00134 Glycosyl hydrolase family 10 signature 160 171 2.0E-15 T 05-07-2017 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 AC028_RS09295 230d86cb3c6a4ca62abf9992bfa854b0 394 SMART SM00633 81 388 3.1E-90 T 05-07-2017 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 AC028_RS09295 230d86cb3c6a4ca62abf9992bfa854b0 394 SUPERFAMILY SSF51445 36 386 6.29E-102 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS09295 230d86cb3c6a4ca62abf9992bfa854b0 394 Gene3D G3DSA:3.20.20.80 37 280 6.9E-105 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS09295 230d86cb3c6a4ca62abf9992bfa854b0 394 Gene3D G3DSA:3.20.20.80 314 386 6.9E-105 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS09295 230d86cb3c6a4ca62abf9992bfa854b0 394 Pfam PF00331 Glycosyl hydrolase family 10 37 385 2.0E-97 T 05-07-2017 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 AC028_RS08785 4e669ac9a0dde682920b42e00f0d8684 132 Pfam PF10116 Protein required for attachment to host cells 10 131 3.4E-25 T 05-07-2017 IPR019291 Host attachment protein AC028_RS05240 00f2f4e8749e135122c291b40a6b58ed 393 SUPERFAMILY SSF53383 15 391 8.58E-56 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS05240 00f2f4e8749e135122c291b40a6b58ed 393 Gene3D G3DSA:3.40.640.10 65 295 1.3E-42 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS05240 00f2f4e8749e135122c291b40a6b58ed 393 Pfam PF00266 Aminotransferase class-V 68 365 1.1E-25 T 05-07-2017 IPR000192 Aminotransferase class V domain AC028_RS19085 edf8dbccde013c049352dab771856deb 638 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 05-07-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AC028_RS19085 edf8dbccde013c049352dab771856deb 638 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 156 166 - T 05-07-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AC028_RS19085 edf8dbccde013c049352dab771856deb 638 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 4 602 6.8E-268 T 05-07-2017 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 AC028_RS19085 edf8dbccde013c049352dab771856deb 638 SUPERFAMILY SSF143975 3 420 5.89E-136 T 05-07-2017 AC028_RS19085 edf8dbccde013c049352dab771856deb 638 Pfam PF00920 Dehydratase family 68 599 8.9E-149 T 05-07-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AC028_RS19085 edf8dbccde013c049352dab771856deb 638 SUPERFAMILY SSF52016 421 601 3.92E-51 T 05-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AC028_RS19130 e68230c9d803bf808dfedb37db73669e 596 Gene3D G3DSA:3.90.700.10 247 352 3.8E-43 T 05-07-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AC028_RS19130 e68230c9d803bf808dfedb37db73669e 596 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 596 9.0E-43 T 05-07-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AC028_RS19130 e68230c9d803bf808dfedb37db73669e 596 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 9 596 1.0E-288 T 05-07-2017 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AC028_RS19130 e68230c9d803bf808dfedb37db73669e 596 Gene3D G3DSA:4.10.80.40 543 596 1.1E-27 T 05-07-2017 AC028_RS19130 e68230c9d803bf808dfedb37db73669e 596 SUPERFAMILY SSF46977 454 596 9.42E-49 T 05-07-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AC028_RS19130 e68230c9d803bf808dfedb37db73669e 596 Gene3D G3DSA:1.20.58.100 436 542 5.1E-37 T 05-07-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AC028_RS19130 e68230c9d803bf808dfedb37db73669e 596 Pfam PF00890 FAD binding domain 12 408 2.7E-121 T 05-07-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AC028_RS19130 e68230c9d803bf808dfedb37db73669e 596 Gene3D G3DSA:3.50.50.60 3 246 2.8E-123 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19130 e68230c9d803bf808dfedb37db73669e 596 Gene3D G3DSA:3.50.50.60 354 429 2.8E-123 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19130 e68230c9d803bf808dfedb37db73669e 596 SUPERFAMILY SSF51905 362 440 4.1E-75 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19130 e68230c9d803bf808dfedb37db73669e 596 SUPERFAMILY SSF51905 4 263 4.1E-75 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19130 e68230c9d803bf808dfedb37db73669e 596 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 12 596 1.5E-242 T 05-07-2017 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AC028_RS19130 e68230c9d803bf808dfedb37db73669e 596 SUPERFAMILY SSF56425 240 358 4.34E-43 T 05-07-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AC028_RS19130 e68230c9d803bf808dfedb37db73669e 596 PIRSF PIRSF000171 1 586 7.0E-37 T 05-07-2017 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 AC028_RS19130 e68230c9d803bf808dfedb37db73669e 596 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 46 55 - T 05-07-2017 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AC028_RS15955 b1e9456014a9dfbd337be553a4c6f7a9 326 Pfam PF01609 Transposase DDE domain 135 310 1.4E-33 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS15955 b1e9456014a9dfbd337be553a4c6f7a9 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS01900 b1e9456014a9dfbd337be553a4c6f7a9 326 Pfam PF01609 Transposase DDE domain 135 310 1.4E-33 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS01900 b1e9456014a9dfbd337be553a4c6f7a9 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS08645 b1e9456014a9dfbd337be553a4c6f7a9 326 Pfam PF01609 Transposase DDE domain 135 310 1.4E-33 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS08645 b1e9456014a9dfbd337be553a4c6f7a9 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS19405 b1e9456014a9dfbd337be553a4c6f7a9 326 Pfam PF01609 Transposase DDE domain 135 310 1.4E-33 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS19405 b1e9456014a9dfbd337be553a4c6f7a9 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS14745 b1e9456014a9dfbd337be553a4c6f7a9 326 Pfam PF01609 Transposase DDE domain 135 310 1.4E-33 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS14745 b1e9456014a9dfbd337be553a4c6f7a9 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS09200 b1e9456014a9dfbd337be553a4c6f7a9 326 Pfam PF01609 Transposase DDE domain 135 310 1.4E-33 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS09200 b1e9456014a9dfbd337be553a4c6f7a9 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS18520 b1e9456014a9dfbd337be553a4c6f7a9 326 Pfam PF01609 Transposase DDE domain 135 310 1.4E-33 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS18520 b1e9456014a9dfbd337be553a4c6f7a9 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS11975 1c3e0b1156d2e44c7c4730573bef26a5 247 SUPERFAMILY SSF56300 1 229 1.9E-32 T 05-07-2017 IPR029052 Metallo-dependent phosphatase-like AC028_RS11975 1c3e0b1156d2e44c7c4730573bef26a5 247 Pfam PF00149 Calcineurin-like phosphoesterase 1 206 5.7E-9 T 05-07-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AC028_RS11975 1c3e0b1156d2e44c7c4730573bef26a5 247 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 247 119.898 T 05-07-2017 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AC028_RS11975 1c3e0b1156d2e44c7c4730573bef26a5 247 Gene3D G3DSA:3.60.21.10 1 125 6.9E-22 T 05-07-2017 IPR029052 Metallo-dependent phosphatase-like AC028_RS11975 1c3e0b1156d2e44c7c4730573bef26a5 247 Gene3D G3DSA:3.60.21.10 180 213 6.9E-22 T 05-07-2017 IPR029052 Metallo-dependent phosphatase-like AC028_RS11975 1c3e0b1156d2e44c7c4730573bef26a5 247 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 239 1.1E-107 T 05-07-2017 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AC028_RS10065 8e080664df2d9694a44bdffa6c9a8a2c 727 SUPERFAMILY SSF52096 165 265 4.97E-68 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS10065 8e080664df2d9694a44bdffa6c9a8a2c 727 SUPERFAMILY SSF52096 360 555 4.97E-68 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS10065 8e080664df2d9694a44bdffa6c9a8a2c 727 SMART SM00228 247 325 5.9E-10 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS10065 8e080664df2d9694a44bdffa6c9a8a2c 727 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 553 702 1.7E-38 T 05-07-2017 IPR020992 Tail specific protease, C-terminal AC028_RS10065 8e080664df2d9694a44bdffa6c9a8a2c 727 SMART SM00245 330 550 9.8E-52 T 05-07-2017 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AC028_RS10065 8e080664df2d9694a44bdffa6c9a8a2c 727 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 242 320 1.3E-13 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS10065 8e080664df2d9694a44bdffa6c9a8a2c 727 SUPERFAMILY SSF50156 230 342 2.11E-13 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS10065 8e080664df2d9694a44bdffa6c9a8a2c 727 Pfam PF03572 Peptidase family S41 366 548 1.7E-52 T 05-07-2017 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AC028_RS10065 8e080664df2d9694a44bdffa6c9a8a2c 727 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 207 569 7.3E-91 T 05-07-2017 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AC028_RS10065 8e080664df2d9694a44bdffa6c9a8a2c 727 Gene3D G3DSA:3.90.226.10 614 636 2.6E-62 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS10065 8e080664df2d9694a44bdffa6c9a8a2c 727 Gene3D G3DSA:3.90.226.10 339 552 2.6E-62 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS10065 8e080664df2d9694a44bdffa6c9a8a2c 727 Gene3D G3DSA:2.30.42.10 247 338 7.8E-19 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS13325 23852b17d1fc247218e97194894d9049 642 Gene3D G3DSA:2.60.120.260 360 484 1.5E-12 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS13325 23852b17d1fc247218e97194894d9049 642 SUPERFAMILY SSF51445 35 353 2.74E-85 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS13325 23852b17d1fc247218e97194894d9049 642 SMART SM00812 39 395 9.2E-13 T 05-07-2017 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 AC028_RS13325 23852b17d1fc247218e97194894d9049 642 SUPERFAMILY SSF49785 355 484 1.56E-13 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS13325 23852b17d1fc247218e97194894d9049 642 SUPERFAMILY SSF49785 512 624 1.56E-13 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS13325 23852b17d1fc247218e97194894d9049 642 Pfam PF00754 F5/8 type C domain 366 471 3.3E-9 T 05-07-2017 IPR000421 Coagulation factor 5/8 C-terminal domain AC028_RS13325 23852b17d1fc247218e97194894d9049 642 Pfam PF00754 F5/8 type C domain 517 622 4.1E-10 T 05-07-2017 IPR000421 Coagulation factor 5/8 C-terminal domain AC028_RS13325 23852b17d1fc247218e97194894d9049 642 Gene3D G3DSA:2.60.120.260 501 638 1.1E-16 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS13325 23852b17d1fc247218e97194894d9049 642 Gene3D G3DSA:3.20.20.80 35 354 5.6E-87 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS13325 23852b17d1fc247218e97194894d9049 642 Pfam PF01120 Alpha-L-fucosidase 38 350 6.5E-36 T 05-07-2017 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 AC028_RS10990 ffce0c91eb3cf2ff5673897ab6118276 164 Pfam PF00186 Dihydrofolate reductase 3 163 2.0E-52 T 05-07-2017 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AC028_RS10990 ffce0c91eb3cf2ff5673897ab6118276 164 Gene3D G3DSA:3.40.430.10 1 164 1.6E-51 T 05-07-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AC028_RS10990 ffce0c91eb3cf2ff5673897ab6118276 164 PIRSF PIRSF000194 1 164 2.1E-55 T 05-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AC028_RS10990 ffce0c91eb3cf2ff5673897ab6118276 164 SUPERFAMILY SSF53597 1 164 9.06E-50 T 05-07-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AC028_RS10990 ffce0c91eb3cf2ff5673897ab6118276 164 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 05-07-2017 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-113510|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-69205 AC028_RS10990 ffce0c91eb3cf2ff5673897ab6118276 164 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.4E-12 T 05-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AC028_RS10990 ffce0c91eb3cf2ff5673897ab6118276 164 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.4E-12 T 05-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AC028_RS10990 ffce0c91eb3cf2ff5673897ab6118276 164 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.4E-12 T 05-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AC028_RS10990 ffce0c91eb3cf2ff5673897ab6118276 164 PRINTS PR00070 Dihydrofolate reductase signature 94 108 1.4E-12 T 05-07-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AC028_RS08410 ac7d253c8383ea91c648a81858a131f4 963 Gene3D G3DSA:2.40.170.20 176 245 3.3E-60 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS08410 ac7d253c8383ea91c648a81858a131f4 963 Gene3D G3DSA:2.40.170.20 896 963 3.3E-60 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS08410 ac7d253c8383ea91c648a81858a131f4 963 Gene3D G3DSA:2.40.170.20 470 861 3.3E-60 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS08410 ac7d253c8383ea91c648a81858a131f4 963 Gene3D G3DSA:2.40.170.20 395 434 3.3E-60 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS08410 ac7d253c8383ea91c648a81858a131f4 963 Gene3D G3DSA:2.40.170.20 323 362 3.3E-60 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS08410 ac7d253c8383ea91c648a81858a131f4 963 Pfam PF00593 TonB dependent receptor 597 953 1.6E-25 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS08410 ac7d253c8383ea91c648a81858a131f4 963 Gene3D G3DSA:2.170.130.10 37 175 4.5E-31 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS08410 ac7d253c8383ea91c648a81858a131f4 963 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 173 2.6E-21 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS08410 ac7d253c8383ea91c648a81858a131f4 963 SUPERFAMILY SSF56935 751 963 6.23E-78 T 05-07-2017 AC028_RS08410 ac7d253c8383ea91c648a81858a131f4 963 SUPERFAMILY SSF56935 324 454 6.23E-78 T 05-07-2017 AC028_RS08410 ac7d253c8383ea91c648a81858a131f4 963 SUPERFAMILY SSF56935 487 712 6.23E-78 T 05-07-2017 AC028_RS08410 ac7d253c8383ea91c648a81858a131f4 963 SUPERFAMILY SSF56935 43 238 6.23E-78 T 05-07-2017 AC028_RS16970 3443fa4136bcdf43529a25ee63708fc6 338 Gene3D G3DSA:1.10.10.10 6 86 3.6E-22 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS16970 3443fa4136bcdf43529a25ee63708fc6 338 Pfam PF03466 LysR substrate binding domain 93 300 4.0E-40 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS16970 3443fa4136bcdf43529a25ee63708fc6 338 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 6.8E-16 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS16970 3443fa4136bcdf43529a25ee63708fc6 338 SUPERFAMILY SSF46785 8 92 1.92E-19 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS16970 3443fa4136bcdf43529a25ee63708fc6 338 SUPERFAMILY SSF53850 94 304 9.31E-41 T 05-07-2017 AC028_RS16970 3443fa4136bcdf43529a25ee63708fc6 338 Gene3D G3DSA:3.40.190.10 98 182 1.8E-19 T 05-07-2017 AC028_RS16970 3443fa4136bcdf43529a25ee63708fc6 338 Gene3D G3DSA:3.40.190.10 183 268 2.0E-17 T 05-07-2017 AC028_RS05175 2f363344621b4017bc5d6ecd07f50f19 218 SUPERFAMILY SSF89623 1 161 1.06E-36 T 05-07-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AC028_RS05175 2f363344621b4017bc5d6ecd07f50f19 218 Gene3D G3DSA:3.40.1400.10 1 209 4.9E-92 T 05-07-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AC028_RS05175 2f363344621b4017bc5d6ecd07f50f19 218 Pfam PF02502 Ribose/Galactose Isomerase 3 144 3.1E-29 T 05-07-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AC028_RS05175 2f363344621b4017bc5d6ecd07f50f19 218 Pfam PF12408 Ribose-5-phosphate isomerase 163 208 7.7E-21 T 05-07-2017 IPR022133 Ribose-5-phosphate isomerase, C-terminal AC028_RS09015 2808762bcb43dc123dc9ecb7cf35ac57 235 Gene3D G3DSA:1.25.40.10 10 167 1.2E-5 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS09015 2808762bcb43dc123dc9ecb7cf35ac57 235 SUPERFAMILY SSF81901 65 167 1.06E-5 T 05-07-2017 AC028_RS04670 2861374dfd738ab4320fd5b20eb3c2e6 902 SUPERFAMILY SSF55729 743 879 4.12E-20 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS04670 2861374dfd738ab4320fd5b20eb3c2e6 902 Pfam PF13549 ATP-grasp domain 482 706 3.7E-75 T 05-07-2017 AC028_RS04670 2861374dfd738ab4320fd5b20eb3c2e6 902 SUPERFAMILY SSF52210 132 291 2.09E-36 T 05-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AC028_RS04670 2861374dfd738ab4320fd5b20eb3c2e6 902 Pfam PF13302 Acetyltransferase (GNAT) domain 743 877 4.0E-9 T 05-07-2017 IPR000182 GNAT domain GO:0008080 AC028_RS04670 2861374dfd738ab4320fd5b20eb3c2e6 902 Gene3D G3DSA:3.40.50.261 133 287 3.9E-30 T 05-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AC028_RS04670 2861374dfd738ab4320fd5b20eb3c2e6 902 SUPERFAMILY SSF51735 1 139 7.88E-28 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS04670 2861374dfd738ab4320fd5b20eb3c2e6 902 Gene3D G3DSA:3.40.50.720 2 132 1.9E-29 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS04670 2861374dfd738ab4320fd5b20eb3c2e6 902 SMART SM00881 9 104 1.4E-14 T 05-07-2017 IPR003781 CoA-binding GO:0048037 AC028_RS04670 2861374dfd738ab4320fd5b20eb3c2e6 902 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 152 289 4.3E-48 T 05-07-2017 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AC028_RS04670 2861374dfd738ab4320fd5b20eb3c2e6 902 Pfam PF13380 CoA binding domain 14 135 1.7E-18 T 05-07-2017 IPR003781 CoA-binding GO:0048037 AC028_RS04670 2861374dfd738ab4320fd5b20eb3c2e6 902 SUPERFAMILY SSF56059 492 706 5.09E-30 T 05-07-2017 AC028_RS04670 2861374dfd738ab4320fd5b20eb3c2e6 902 SUPERFAMILY SSF52210 297 453 2.09E-38 T 05-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AC028_RS04670 2861374dfd738ab4320fd5b20eb3c2e6 902 Gene3D G3DSA:3.40.50.261 297 447 1.0E-14 T 05-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AC028_RS04670 2861374dfd738ab4320fd5b20eb3c2e6 902 Gene3D G3DSA:3.40.630.30 744 893 3.0E-17 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS04485 afa6c6d56f9c8bdf93d2535984f4f6e7 304 SUPERFAMILY SSF53850 93 293 1.7E-32 T 05-07-2017 AC028_RS04485 afa6c6d56f9c8bdf93d2535984f4f6e7 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.1E-19 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS04485 afa6c6d56f9c8bdf93d2535984f4f6e7 304 SUPERFAMILY SSF46785 5 115 4.15E-22 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS04485 afa6c6d56f9c8bdf93d2535984f4f6e7 304 Gene3D G3DSA:3.40.190.10 95 181 1.1E-21 T 05-07-2017 AC028_RS04485 afa6c6d56f9c8bdf93d2535984f4f6e7 304 Pfam PF03466 LysR substrate binding domain 92 289 2.3E-28 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS04485 afa6c6d56f9c8bdf93d2535984f4f6e7 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 4.1E-7 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS04485 afa6c6d56f9c8bdf93d2535984f4f6e7 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 4.1E-7 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS04485 afa6c6d56f9c8bdf93d2535984f4f6e7 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 4.1E-7 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS04485 afa6c6d56f9c8bdf93d2535984f4f6e7 304 Gene3D G3DSA:1.10.10.10 6 89 9.9E-23 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS04485 afa6c6d56f9c8bdf93d2535984f4f6e7 304 Gene3D G3DSA:3.40.190.10 182 246 1.2E-9 T 05-07-2017 AC028_RS00925 430045e5f1e16aca0a35d761b302a293 296 Gene3D G3DSA:3.55.30.10 1 177 4.7E-53 T 05-07-2017 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AC028_RS00925 430045e5f1e16aca0a35d761b302a293 296 Gene3D G3DSA:3.90.1280.10 225 283 1.9E-21 T 05-07-2017 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AC028_RS00925 430045e5f1e16aca0a35d761b302a293 296 Gene3D G3DSA:1.10.287.480 180 223 1.4E-11 T 05-07-2017 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain AC028_RS00925 430045e5f1e16aca0a35d761b302a293 296 SUPERFAMILY SSF64397 4 233 2.88E-58 T 05-07-2017 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AC028_RS00925 430045e5f1e16aca0a35d761b302a293 296 PIRSF PIRSF005261 1 286 1.4E-96 T 05-07-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AC028_RS00925 430045e5f1e16aca0a35d761b302a293 296 Pfam PF01430 Hsp33 protein 5 273 2.6E-76 T 05-07-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AC028_RS00925 430045e5f1e16aca0a35d761b302a293 296 SUPERFAMILY SSF118352 226 283 3.27E-17 T 05-07-2017 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AC028_RS10665 07e0fab4730675d772695c01c956baba 303 SUPERFAMILY SSF54211 133 277 5.61E-51 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS10665 07e0fab4730675d772695c01c956baba 303 Gene3D G3DSA:3.30.1700.10 128 282 4.1E-59 T 05-07-2017 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AC028_RS10665 07e0fab4730675d772695c01c956baba 303 SUPERFAMILY SSF54211 3 125 1.29E-42 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS10665 07e0fab4730675d772695c01c956baba 303 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 45.952 T 05-07-2017 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AC028_RS10665 07e0fab4730675d772695c01c956baba 303 Gene3D G3DSA:3.30.230.20 3 125 1.3E-45 T 05-07-2017 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AC028_RS10665 07e0fab4730675d772695c01c956baba 303 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 2.9E-105 T 05-07-2017 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AC028_RS10665 07e0fab4730675d772695c01c956baba 303 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3 294 4.5E-118 T 05-07-2017 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AC028_RS01060 80fa6418caf3532adf80066163c7d1d7 929 SUPERFAMILY SSF49452 3 80 6.87E-12 T 05-07-2017 IPR013784 Carbohydrate-binding-like fold GO:0030246 AC028_RS01060 80fa6418caf3532adf80066163c7d1d7 929 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 97 885 6.0E-154 T 05-07-2017 IPR010104 Bacterial TonB-dependent receptor AC028_RS01060 80fa6418caf3532adf80066163c7d1d7 929 Pfam PF07715 TonB-dependent Receptor Plug Domain 104 219 2.9E-16 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS01060 80fa6418caf3532adf80066163c7d1d7 929 Gene3D G3DSA:2.60.40.1120 4 82 3.5E-12 T 05-07-2017 IPR014766 Carboxypeptidase, regulatory domain AC028_RS01060 80fa6418caf3532adf80066163c7d1d7 929 Pfam PF13620 Carboxypeptidase regulatory-like domain 4 81 1.7E-12 T 05-07-2017 AC028_RS01060 80fa6418caf3532adf80066163c7d1d7 929 Pfam PF00593 TonB dependent receptor 687 873 2.1E-20 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01060 80fa6418caf3532adf80066163c7d1d7 929 Gene3D G3DSA:2.40.170.20 622 883 3.7E-55 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01060 80fa6418caf3532adf80066163c7d1d7 929 Gene3D G3DSA:2.40.170.20 220 446 3.7E-55 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01060 80fa6418caf3532adf80066163c7d1d7 929 Gene3D G3DSA:2.40.170.20 496 575 3.7E-55 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01060 80fa6418caf3532adf80066163c7d1d7 929 Gene3D G3DSA:2.170.130.10 88 219 1.9E-14 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS01060 80fa6418caf3532adf80066163c7d1d7 929 SUPERFAMILY SSF56935 102 290 6.72E-66 T 05-07-2017 AC028_RS01060 80fa6418caf3532adf80066163c7d1d7 929 SUPERFAMILY SSF56935 499 567 6.72E-66 T 05-07-2017 AC028_RS01060 80fa6418caf3532adf80066163c7d1d7 929 SUPERFAMILY SSF56935 336 446 6.72E-66 T 05-07-2017 AC028_RS01060 80fa6418caf3532adf80066163c7d1d7 929 SUPERFAMILY SSF56935 621 885 6.72E-66 T 05-07-2017 AC028_RS18790 ff3591196639509da523053029e3b708 790 SUPERFAMILY SSF52096 474 787 4.52E-37 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS18790 ff3591196639509da523053029e3b708 790 Gene3D G3DSA:3.40.50.720 6 195 3.4E-40 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS18790 ff3591196639509da523053029e3b708 790 Pfam PF00378 Enoyl-CoA hydratase/isomerase 487 619 1.7E-15 T 05-07-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AC028_RS18790 ff3591196639509da523053029e3b708 790 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 195 293 6.8E-10 T 05-07-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 AC028_RS18790 ff3591196639509da523053029e3b708 790 SUPERFAMILY SSF48179 345 458 4.59E-17 T 05-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AC028_RS18790 ff3591196639509da523053029e3b708 790 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 10 192 3.1E-41 T 05-07-2017 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 AC028_RS18790 ff3591196639509da523053029e3b708 790 Gene3D G3DSA:3.90.226.10 483 620 2.1E-23 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS18790 ff3591196639509da523053029e3b708 790 Gene3D G3DSA:1.10.1040.10 196 294 1.9E-12 T 05-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AC028_RS18790 ff3591196639509da523053029e3b708 790 Gene3D G3DSA:1.10.1040.10 352 437 1.7E-8 T 05-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AC028_RS18790 ff3591196639509da523053029e3b708 790 SUPERFAMILY SSF48179 193 311 1.62E-19 T 05-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AC028_RS18790 ff3591196639509da523053029e3b708 790 SUPERFAMILY SSF51735 7 193 1.31E-40 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS07835 2916db124d2dd14213a7f379e57f6979 743 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 117 742 42.668 T 05-07-2017 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AC028_RS07835 2916db124d2dd14213a7f379e57f6979 743 Gene3D G3DSA:3.20.20.80 258 623 6.1E-90 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS07835 2916db124d2dd14213a7f379e57f6979 743 Gene3D G3DSA:2.60.40.1180 639 741 9.7E-35 T 05-07-2017 IPR013780 Glycosyl hydrolase, all-beta AC028_RS07835 2916db124d2dd14213a7f379e57f6979 743 SUPERFAMILY SSF51011 639 742 3.12E-33 T 05-07-2017 AC028_RS07835 2916db124d2dd14213a7f379e57f6979 743 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 141 222 6.9E-22 T 05-07-2017 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AC028_RS07835 2916db124d2dd14213a7f379e57f6979 743 Pfam PF00128 Alpha amylase, catalytic domain 290 363 3.8E-6 T 05-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AC028_RS07835 2916db124d2dd14213a7f379e57f6979 743 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 132 739 1.4E-261 T 05-07-2017 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AC028_RS07835 2916db124d2dd14213a7f379e57f6979 743 Gene3D G3DSA:2.60.40.10 34 123 2.8E-10 T 05-07-2017 IPR013783 Immunoglobulin-like fold AC028_RS07835 2916db124d2dd14213a7f379e57f6979 743 Gene3D G3DSA:2.60.40.10 137 235 1.0E-33 T 05-07-2017 IPR013783 Immunoglobulin-like fold AC028_RS07835 2916db124d2dd14213a7f379e57f6979 743 SUPERFAMILY SSF51445 195 634 4.22E-109 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS07835 2916db124d2dd14213a7f379e57f6979 743 SUPERFAMILY SSF81296 38 125 8.96E-10 T 05-07-2017 IPR014756 Immunoglobulin E-set AC028_RS07835 2916db124d2dd14213a7f379e57f6979 743 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 643 741 4.3E-24 T 05-07-2017 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AC028_RS07835 2916db124d2dd14213a7f379e57f6979 743 PIRSF PIRSF000463 25 743 4.3E-271 T 05-07-2017 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AC028_RS07835 2916db124d2dd14213a7f379e57f6979 743 SMART SM00642 265 610 6.8E-7 T 05-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AC028_RS20425 e033b4f680c28cff1540dc0205e188dd 355 Gene3D G3DSA:3.30.70.20 194 269 7.5E-6 T 05-07-2017 AC028_RS20425 e033b4f680c28cff1540dc0205e188dd 355 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 10 319 49.68 T 05-07-2017 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AC028_RS20425 e033b4f680c28cff1540dc0205e188dd 355 Pfam PF13484 4Fe-4S double cluster binding domain 196 260 2.6E-19 T 05-07-2017 AC028_RS20425 e033b4f680c28cff1540dc0205e188dd 355 Pfam PF08331 Domain of unknown function (DUF1730) 65 144 4.6E-23 T 05-07-2017 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 AC028_RS20425 e033b4f680c28cff1540dc0205e188dd 355 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 17 353 9.7E-150 T 05-07-2017 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AC028_RS20425 e033b4f680c28cff1540dc0205e188dd 355 SUPERFAMILY SSF54862 174 321 5.02E-18 T 05-07-2017 AC028_RS20425 e033b4f680c28cff1540dc0205e188dd 355 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 197 208 - T 05-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AC028_RS21480 81538b996191bd785a953e90bd42e89c 247 Gene3D G3DSA:3.40.50.720 10 243 4.9E-45 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS21480 81538b996191bd785a953e90bd42e89c 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 1.5E-10 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS21480 81538b996191bd785a953e90bd42e89c 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 1.5E-10 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS21480 81538b996191bd785a953e90bd42e89c 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 1.5E-10 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS21480 81538b996191bd785a953e90bd42e89c 247 SUPERFAMILY SSF51735 13 243 6.04E-44 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS21480 81538b996191bd785a953e90bd42e89c 247 Pfam PF00106 short chain dehydrogenase 17 209 1.6E-32 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS01555 0b66c0675d05cc5dd9967c0d73b6504c 799 SUPERFAMILY SSF56935 36 799 3.3E-102 T 05-07-2017 AC028_RS01555 0b66c0675d05cc5dd9967c0d73b6504c 799 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 43 - T 05-07-2017 IPR010916 TonB box, conserved site AC028_RS01555 0b66c0675d05cc5dd9967c0d73b6504c 799 Gene3D G3DSA:2.170.130.10 50 173 8.3E-33 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS01555 0b66c0675d05cc5dd9967c0d73b6504c 799 Gene3D G3DSA:2.40.170.20 174 799 4.2E-84 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01555 0b66c0675d05cc5dd9967c0d73b6504c 799 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 171 4.5E-23 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS01555 0b66c0675d05cc5dd9967c0d73b6504c 799 Pfam PF00593 TonB dependent receptor 505 798 1.2E-23 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS00920 fa9fbc5cbc19d782fe87ae18f5a8fc91 246 SUPERFAMILY SSF53955 68 238 6.75E-56 T 05-07-2017 IPR023346 Lysozyme-like domain AC028_RS00920 fa9fbc5cbc19d782fe87ae18f5a8fc91 246 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 16 240 45.361 T 05-07-2017 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 AC028_RS00920 fa9fbc5cbc19d782fe87ae18f5a8fc91 246 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 19 238 8.3E-86 T 05-07-2017 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 AC028_RS00920 fa9fbc5cbc19d782fe87ae18f5a8fc91 246 Pfam PF00912 Transglycosylase 71 227 1.6E-44 T 05-07-2017 IPR001264 Glycosyl transferase, family 51 AC028_RS00920 fa9fbc5cbc19d782fe87ae18f5a8fc91 246 Gene3D G3DSA:1.10.3810.10 70 236 2.5E-54 T 05-07-2017 AC028_RS01210 32e7b160c591372c70f1b4c8bb861adb 674 Gene3D G3DSA:3.40.50.300 195 243 3.8E-20 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01210 32e7b160c591372c70f1b4c8bb861adb 674 Gene3D G3DSA:3.40.50.300 26 123 3.8E-20 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01210 32e7b160c591372c70f1b4c8bb861adb 674 Pfam PF00270 DEAD/DEAH box helicase 37 89 1.3E-4 T 05-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AC028_RS01210 32e7b160c591372c70f1b4c8bb861adb 674 Pfam PF13307 Helicase C-terminal domain 480 636 8.0E-35 T 05-07-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AC028_RS01210 32e7b160c591372c70f1b4c8bb861adb 674 SUPERFAMILY SSF52540 100 114 5.61E-5 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01210 32e7b160c591372c70f1b4c8bb861adb 674 SUPERFAMILY SSF52540 593 615 5.61E-5 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01210 32e7b160c591372c70f1b4c8bb861adb 674 SUPERFAMILY SSF52540 189 235 5.61E-5 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01210 32e7b160c591372c70f1b4c8bb861adb 674 SUPERFAMILY SSF52540 383 562 5.61E-5 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01210 32e7b160c591372c70f1b4c8bb861adb 674 SUPERFAMILY SSF52540 582 620 7.48E-23 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01210 32e7b160c591372c70f1b4c8bb861adb 674 SUPERFAMILY SSF52540 192 249 7.48E-23 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01210 32e7b160c591372c70f1b4c8bb861adb 674 SUPERFAMILY SSF52540 19 115 7.48E-23 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01210 32e7b160c591372c70f1b4c8bb861adb 674 SMART SM00491 495 623 1.3E-36 T 05-07-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AC028_RS06525 cccbb31b796df236eb876873b45481cb 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 131 220 2.1E-24 T 05-07-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AC028_RS06525 cccbb31b796df236eb876873b45481cb 271 SUPERFAMILY SSF57716 219 270 6.56E-15 T 05-07-2017 AC028_RS06525 cccbb31b796df236eb876873b45481cb 271 SMART SM00898 2 117 7.1E-55 T 05-07-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AC028_RS06525 cccbb31b796df236eb876873b45481cb 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 246 270 - T 05-07-2017 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AC028_RS06525 cccbb31b796df236eb876873b45481cb 271 SUPERFAMILY SSF46946 132 223 1.19E-29 T 05-07-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AC028_RS06525 cccbb31b796df236eb876873b45481cb 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 270 9.1E-88 T 05-07-2017 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AC028_RS06525 cccbb31b796df236eb876873b45481cb 271 SMART SM01232 131 223 3.7E-48 T 05-07-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AC028_RS06525 cccbb31b796df236eb876873b45481cb 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 1.6E-33 T 05-07-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AC028_RS06525 cccbb31b796df236eb876873b45481cb 271 Pfam PF06827 Zinc finger found in FPG and IleRS 243 270 1.7E-6 T 05-07-2017 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AC028_RS06525 cccbb31b796df236eb876873b45481cb 271 SUPERFAMILY SSF81624 2 140 8.24E-42 T 05-07-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AC028_RS06525 cccbb31b796df236eb876873b45481cb 271 Gene3D G3DSA:3.20.190.10 2 131 1.9E-39 T 05-07-2017 AC028_RS06525 cccbb31b796df236eb876873b45481cb 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 271 43.875 T 05-07-2017 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AC028_RS06525 cccbb31b796df236eb876873b45481cb 271 Gene3D G3DSA:1.10.8.50 132 271 3.2E-49 T 05-07-2017 AC028_RS04555 53300dd470f64e66d8110eae2a701ceb 336 SUPERFAMILY SSF74653 255 321 1.57E-19 T 05-07-2017 AC028_RS04555 53300dd470f64e66d8110eae2a701ceb 336 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 263 334 1.9E-17 T 05-07-2017 IPR006260 TonB, C-terminal GO:0006810 AC028_RS04555 53300dd470f64e66d8110eae2a701ceb 336 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 261 332 2.2E-17 T 05-07-2017 IPR006260 TonB, C-terminal GO:0006810 AC028_RS04555 53300dd470f64e66d8110eae2a701ceb 336 PRINTS PR01374 Gram-negative bacterial tonB protein signature 257 278 3.0E-9 T 05-07-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AC028_RS04555 53300dd470f64e66d8110eae2a701ceb 336 PRINTS PR01374 Gram-negative bacterial tonB protein signature 278 296 3.0E-9 T 05-07-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AC028_RS04555 53300dd470f64e66d8110eae2a701ceb 336 PRINTS PR01374 Gram-negative bacterial tonB protein signature 297 314 3.0E-9 T 05-07-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AC028_RS04555 53300dd470f64e66d8110eae2a701ceb 336 Gene3D G3DSA:3.30.1150.10 225 336 6.0E-12 T 05-07-2017 AC028_RS17760 5f61ab743b54fb0fad8716c278d21106 324 Hamap MF_00384 Homoserine kinase [thrB]. 22 322 27.874 T 05-07-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AC028_RS17760 5f61ab743b54fb0fad8716c278d21106 324 SUPERFAMILY SSF54211 23 175 2.35E-26 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS17760 5f61ab743b54fb0fad8716c278d21106 324 Pfam PF00288 GHMP kinases N terminal domain 101 167 3.8E-9 T 05-07-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 AC028_RS17760 5f61ab743b54fb0fad8716c278d21106 324 PIRSF PIRSF000676 19 322 1.5E-75 T 05-07-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AC028_RS17760 5f61ab743b54fb0fad8716c278d21106 324 Pfam PF08544 GHMP kinases C terminal 227 301 5.4E-10 T 05-07-2017 IPR013750 GHMP kinase, C-terminal domain AC028_RS17760 5f61ab743b54fb0fad8716c278d21106 324 SUPERFAMILY SSF55060 188 295 4.32E-23 T 05-07-2017 IPR013750 GHMP kinase, C-terminal domain AC028_RS17760 5f61ab743b54fb0fad8716c278d21106 324 Gene3D G3DSA:3.30.230.10 22 174 8.1E-37 T 05-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_RS17760 5f61ab743b54fb0fad8716c278d21106 324 PRINTS PR00958 Homoserine kinase signature 154 167 2.1E-21 T 05-07-2017 AC028_RS17760 5f61ab743b54fb0fad8716c278d21106 324 PRINTS PR00958 Homoserine kinase signature 29 44 2.1E-21 T 05-07-2017 AC028_RS17760 5f61ab743b54fb0fad8716c278d21106 324 PRINTS PR00958 Homoserine kinase signature 114 129 2.1E-21 T 05-07-2017 AC028_RS17760 5f61ab743b54fb0fad8716c278d21106 324 PRINTS PR00958 Homoserine kinase signature 189 206 2.1E-21 T 05-07-2017 AC028_RS17760 5f61ab743b54fb0fad8716c278d21106 324 PRINTS PR00958 Homoserine kinase signature 268 283 2.1E-21 T 05-07-2017 AC028_RS17760 5f61ab743b54fb0fad8716c278d21106 324 Gene3D G3DSA:3.30.70.890 182 308 7.3E-28 T 05-07-2017 IPR013750 GHMP kinase, C-terminal domain AC028_RS06510 21b0e6b453c5a7eed756806251c7dd4a 414 SMART SM00388 182 247 3.1E-5 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS06510 21b0e6b453c5a7eed756806251c7dd4a 414 SUPERFAMILY SSF55781 23 161 5.15E-19 T 05-07-2017 IPR029016 GAF domain-like AC028_RS06510 21b0e6b453c5a7eed756806251c7dd4a 414 Gene3D G3DSA:3.30.565.10 259 400 2.5E-14 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS06510 21b0e6b453c5a7eed756806251c7dd4a 414 Pfam PF00512 His Kinase A (phospho-acceptor) domain 183 243 3.5E-7 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS06510 21b0e6b453c5a7eed756806251c7dd4a 414 Pfam PF01590 GAF domain 24 154 1.7E-6 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS06510 21b0e6b453c5a7eed756806251c7dd4a 414 SUPERFAMILY SSF55874 259 399 1.14E-12 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS06510 21b0e6b453c5a7eed756806251c7dd4a 414 Gene3D G3DSA:1.10.287.130 178 243 3.4E-9 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS06510 21b0e6b453c5a7eed756806251c7dd4a 414 SMART SM00065 16 163 8.6E-9 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS06510 21b0e6b453c5a7eed756806251c7dd4a 414 SUPERFAMILY SSF47384 175 243 1.79E-9 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS06510 21b0e6b453c5a7eed756806251c7dd4a 414 Gene3D G3DSA:3.30.450.40 24 163 4.0E-16 T 05-07-2017 IPR029016 GAF domain-like AC028_RS06510 21b0e6b453c5a7eed756806251c7dd4a 414 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 292 396 4.9E-5 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS17770 1bb70c5651105241243c9ebc28cd8acf 434 TIGRFAM TIGR00260 thrC: threonine synthase 67 397 1.5E-70 T 05-07-2017 IPR004450 Threonine synthase-like AC028_RS17770 1bb70c5651105241243c9ebc28cd8acf 434 Gene3D G3DSA:3.40.50.1100 102 192 1.3E-13 T 05-07-2017 AC028_RS17770 1bb70c5651105241243c9ebc28cd8acf 434 SUPERFAMILY SSF53686 2 430 3.14E-121 T 05-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AC028_RS17770 1bb70c5651105241243c9ebc28cd8acf 434 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 93 369 3.5E-23 T 05-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AC028_RS17770 1bb70c5651105241243c9ebc28cd8acf 434 Pfam PF14821 Threonine synthase N terminus 2 75 2.3E-13 T 05-07-2017 IPR029144 Threonine synthase, N-terminal AC028_RS17770 1bb70c5651105241243c9ebc28cd8acf 434 Gene3D G3DSA:3.40.50.1100 193 406 8.7E-64 T 05-07-2017 AC028_RS17770 1bb70c5651105241243c9ebc28cd8acf 434 Gene3D G3DSA:3.90.1380.10 2 79 3.5E-17 T 05-07-2017 IPR029144 Threonine synthase, N-terminal AC028_RS17770 1bb70c5651105241243c9ebc28cd8acf 434 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 93 107 - T 05-07-2017 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AC028_RS11890 a3f829faf6f4f34bd3bdd5260ad1344e 286 Gene3D G3DSA:1.10.3720.10 26 280 2.9E-50 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS11890 a3f829faf6f4f34bd3bdd5260ad1344e 286 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 17 280 1.2E-125 T 05-07-2017 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 AC028_RS11890 a3f829faf6f4f34bd3bdd5260ad1344e 286 SUPERFAMILY SSF161098 24 274 5.49E-56 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS11890 a3f829faf6f4f34bd3bdd5260ad1344e 286 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 15 277 1.7E-97 T 05-07-2017 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AC028_RS11890 a3f829faf6f4f34bd3bdd5260ad1344e 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 278 1.5E-26 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS10630 e16822a87cc257c78b1a1cc5b45d16f5 458 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 17 381 39.359 T 05-07-2017 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 AC028_RS10630 e16822a87cc257c78b1a1cc5b45d16f5 458 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 19 372 6.7E-126 T 05-07-2017 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 AC028_RS10630 e16822a87cc257c78b1a1cc5b45d16f5 458 Pfam PF01098 Cell cycle protein 24 373 1.0E-98 T 05-07-2017 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 AC028_RS05460 05cad3ff3ac2759edcc1f6aa28f20d1b 433 Gene3D G3DSA:3.40.50.1220 188 344 8.0E-43 T 05-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AC028_RS05460 05cad3ff3ac2759edcc1f6aa28f20d1b 433 Gene3D G3DSA:3.40.50.970 3 181 1.6E-50 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS05460 05cad3ff3ac2759edcc1f6aa28f20d1b 433 SUPERFAMILY SSF52518 4 179 9.51E-43 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS05460 05cad3ff3ac2759edcc1f6aa28f20d1b 433 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 321 2.6E-30 T 05-07-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AC028_RS05460 05cad3ff3ac2759edcc1f6aa28f20d1b 433 Gene3D G3DSA:3.40.50.970 350 432 3.1E-20 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS05460 05cad3ff3ac2759edcc1f6aa28f20d1b 433 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 172 3.2E-42 T 05-07-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AC028_RS05460 05cad3ff3ac2759edcc1f6aa28f20d1b 433 SUPERFAMILY SSF52518 359 432 1.11E-19 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS05460 05cad3ff3ac2759edcc1f6aa28f20d1b 433 SUPERFAMILY SSF52467 184 352 2.0E-44 T 05-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AC028_RS05460 05cad3ff3ac2759edcc1f6aa28f20d1b 433 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 383 432 1.5E-8 T 05-07-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AC028_RS06975 a81e1043fde3f253f1160748f5a5b6dc 766 Pfam PF00593 TonB dependent receptor 495 764 1.5E-27 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS06975 a81e1043fde3f253f1160748f5a5b6dc 766 Gene3D G3DSA:2.170.130.10 51 163 3.6E-14 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS06975 a81e1043fde3f253f1160748f5a5b6dc 766 Gene3D G3DSA:2.40.170.20 314 766 9.5E-81 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS06975 a81e1043fde3f253f1160748f5a5b6dc 766 Gene3D G3DSA:2.40.170.20 164 279 9.5E-81 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS06975 a81e1043fde3f253f1160748f5a5b6dc 766 SUPERFAMILY SSF56935 300 766 3.04E-83 T 05-07-2017 AC028_RS06975 a81e1043fde3f253f1160748f5a5b6dc 766 SUPERFAMILY SSF56935 35 271 3.04E-83 T 05-07-2017 AC028_RS06975 a81e1043fde3f253f1160748f5a5b6dc 766 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 749 766 - T 05-07-2017 IPR010917 TonB-dependent receptor, conserved site AC028_RS06975 a81e1043fde3f253f1160748f5a5b6dc 766 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 149 4.8E-13 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS19505 3c54ab62661c59386071115628d5ead0 159 Pfam PF04940 Sensors of blue-light using FAD 18 108 1.0E-25 T 05-07-2017 IPR007024 BLUF domain GO:0009882|GO:0071949 AC028_RS19505 3c54ab62661c59386071115628d5ead0 159 SUPERFAMILY SSF54975 17 129 1.57E-30 T 05-07-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AC028_RS19505 3c54ab62661c59386071115628d5ead0 159 SMART SM01034 17 109 1.2E-34 T 05-07-2017 IPR007024 BLUF domain GO:0009882|GO:0071949 AC028_RS18740 f1e7c458fde6fd68cfcc1e72965f47db 372 Gene3D G3DSA:3.40.630.30 175 319 3.1E-19 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS18740 f1e7c458fde6fd68cfcc1e72965f47db 372 SUPERFAMILY SSF55729 183 350 1.44E-35 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS18740 f1e7c458fde6fd68cfcc1e72965f47db 372 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 11 371 1.0E-135 T 05-07-2017 IPR007434 Peptidogalycan biosysnthesis/recognition AC028_RS04060 212980749ac5a813caf2ad8a74b056fb 520 Gene3D G3DSA:3.20.20.450 270 512 2.1E-81 T 05-07-2017 IPR001633 EAL domain AC028_RS04060 212980749ac5a813caf2ad8a74b056fb 520 SMART SM00052 263 507 1.4E-92 T 05-07-2017 IPR001633 EAL domain AC028_RS04060 212980749ac5a813caf2ad8a74b056fb 520 Pfam PF00563 EAL domain 271 501 2.4E-62 T 05-07-2017 IPR001633 EAL domain AC028_RS04060 212980749ac5a813caf2ad8a74b056fb 520 Pfam PF12792 CSS motif domain associated with EAL 40 232 8.5E-33 T 05-07-2017 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AC028_RS04060 212980749ac5a813caf2ad8a74b056fb 520 SUPERFAMILY SSF141868 270 514 1.31E-75 T 05-07-2017 IPR001633 EAL domain AC028_RS01925 c4f09397f7aa24f7ca753e5c4c8aae69 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 2.6E-17 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS01925 c4f09397f7aa24f7ca753e5c4c8aae69 225 Gene3D G3DSA:3.40.50.2300 2 120 3.9E-36 T 05-07-2017 AC028_RS01925 c4f09397f7aa24f7ca753e5c4c8aae69 225 SUPERFAMILY SSF52172 2 174 1.38E-38 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS01925 c4f09397f7aa24f7ca753e5c4c8aae69 225 SMART SM00862 146 220 2.8E-17 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS01925 c4f09397f7aa24f7ca753e5c4c8aae69 225 Pfam PF00072 Response regulator receiver domain 3 112 1.9E-26 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS01925 c4f09397f7aa24f7ca753e5c4c8aae69 225 Gene3D G3DSA:1.10.10.10 125 222 6.4E-23 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS01925 c4f09397f7aa24f7ca753e5c4c8aae69 225 SMART SM00448 1 113 2.9E-39 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS14680 fa98a9504d281755bad3084dda55e4ea 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 1.0E-38 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS14680 fa98a9504d281755bad3084dda55e4ea 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 1.0E-38 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS14680 fa98a9504d281755bad3084dda55e4ea 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 1.0E-38 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS14680 fa98a9504d281755bad3084dda55e4ea 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.0E-38 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS14680 fa98a9504d281755bad3084dda55e4ea 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 1.0E-38 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS14680 fa98a9504d281755bad3084dda55e4ea 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.0E-38 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS14680 fa98a9504d281755bad3084dda55e4ea 268 Gene3D G3DSA:3.40.50.720 11 264 1.7E-69 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS14680 fa98a9504d281755bad3084dda55e4ea 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 05-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AC028_RS14680 fa98a9504d281755bad3084dda55e4ea 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 262 1.6E-58 T 05-07-2017 AC028_RS14680 fa98a9504d281755bad3084dda55e4ea 268 SUPERFAMILY SSF51735 16 262 1.67E-66 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS14680 fa98a9504d281755bad3084dda55e4ea 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 8.4E-12 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS14680 fa98a9504d281755bad3084dda55e4ea 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 8.4E-12 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS14680 fa98a9504d281755bad3084dda55e4ea 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 8.4E-12 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS22175 fe1edcba3f7c4b144f2d5048a7f140b6 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 4.1E-24 T 05-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AC028_RS22175 fe1edcba3f7c4b144f2d5048a7f140b6 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 4.1E-24 T 05-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AC028_RS22175 fe1edcba3f7c4b144f2d5048a7f140b6 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 4.1E-24 T 05-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AC028_RS22175 fe1edcba3f7c4b144f2d5048a7f140b6 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 4.1E-24 T 05-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AC028_RS22175 fe1edcba3f7c4b144f2d5048a7f140b6 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 4.1E-24 T 05-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AC028_RS22175 fe1edcba3f7c4b144f2d5048a7f140b6 467 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 05-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS22175 fe1edcba3f7c4b144f2d5048a7f140b6 467 Gene3D G3DSA:3.90.800.10 68 180 6.1E-33 T 05-07-2017 AC028_RS22175 fe1edcba3f7c4b144f2d5048a7f140b6 467 Gene3D G3DSA:1.10.1160.10 233 313 2.8E-31 T 05-07-2017 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AC028_RS22175 fe1edcba3f7c4b144f2d5048a7f140b6 467 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 305 7.2E-102 T 05-07-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AC028_RS22175 fe1edcba3f7c4b144f2d5048a7f140b6 467 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 459 7.1E-169 T 05-07-2017 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AC028_RS22175 fe1edcba3f7c4b144f2d5048a7f140b6 467 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 461 32.717 T 05-07-2017 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AC028_RS22175 fe1edcba3f7c4b144f2d5048a7f140b6 467 SUPERFAMILY SSF52374 4 295 2.41E-106 T 05-07-2017 AC028_RS22175 fe1edcba3f7c4b144f2d5048a7f140b6 467 SUPERFAMILY SSF48163 299 461 5.36E-36 T 05-07-2017 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AC028_RS22175 fe1edcba3f7c4b144f2d5048a7f140b6 467 Gene3D G3DSA:3.40.50.620 181 230 3.0E-52 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS22175 fe1edcba3f7c4b144f2d5048a7f140b6 467 Gene3D G3DSA:3.40.50.620 3 67 3.0E-52 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS22175 fe1edcba3f7c4b144f2d5048a7f140b6 467 Gene3D G3DSA:1.10.10.350 364 461 1.7E-26 T 05-07-2017 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AC028_RS15400 107860e6e09e533ddee3cc00aee91913 401 Gene3D G3DSA:3.40.50.2000 161 357 7.4E-8 T 05-07-2017 AC028_RS15400 107860e6e09e533ddee3cc00aee91913 401 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 7 380 5.4E-113 T 05-07-2017 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AC028_RS15400 107860e6e09e533ddee3cc00aee91913 401 SUPERFAMILY SSF53756 8 301 4.71E-31 T 05-07-2017 AC028_RS15400 107860e6e09e533ddee3cc00aee91913 401 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 6 385 41.56 T 05-07-2017 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AC028_RS15400 107860e6e09e533ddee3cc00aee91913 401 Pfam PF02684 Lipid-A-disaccharide synthetase 9 353 4.7E-112 T 05-07-2017 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AC028_RS20170 2268c2c1d786f6ac73b92f005f4af668 95 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 79 1.6E-26 T 05-07-2017 IPR002696 Putative membrane protein insertion efficiency factor AC028_RS20170 2268c2c1d786f6ac73b92f005f4af668 95 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 22 75 5.0E-25 T 05-07-2017 IPR002696 Putative membrane protein insertion efficiency factor AC028_RS20170 2268c2c1d786f6ac73b92f005f4af668 95 SMART SM01234 8 75 1.1E-40 T 05-07-2017 IPR002696 Putative membrane protein insertion efficiency factor AC028_RS20170 2268c2c1d786f6ac73b92f005f4af668 95 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.485 T 05-07-2017 IPR002696 Putative membrane protein insertion efficiency factor AC028_RS20170 2268c2c1d786f6ac73b92f005f4af668 95 Pfam PF01809 Haemolytic domain 10 75 1.7E-27 T 05-07-2017 IPR002696 Putative membrane protein insertion efficiency factor AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 Gene3D G3DSA:1.10.420.10 263 286 3.8E-47 T 05-07-2017 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 Gene3D G3DSA:1.10.420.10 322 419 3.8E-47 T 05-07-2017 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 Hamap MF_01961 Catalase-peroxidase [katG]. 2 748 42.594 T 05-07-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 SUPERFAMILY SSF48113 442 747 7.51E-117 T 05-07-2017 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 Gene3D G3DSA:1.10.520.10 41 184 1.2E-71 T 05-07-2017 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 Gene3D G3DSA:1.10.520.10 239 262 1.2E-71 T 05-07-2017 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 271 281 - T 05-07-2017 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 PRINTS PR00458 Haem peroxidase superfamily signature 162 174 1.2E-12 T 05-07-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 PRINTS PR00458 Haem peroxidase superfamily signature 84 98 1.2E-12 T 05-07-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 PRINTS PR00458 Haem peroxidase superfamily signature 144 161 1.2E-12 T 05-07-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 PRINTS PR00458 Haem peroxidase superfamily signature 330 345 1.2E-12 T 05-07-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 Gene3D G3DSA:1.10.420.10 601 722 1.1E-45 T 05-07-2017 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 6 747 0.0 T 05-07-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 ProSitePatterns PS00436 Peroxidases active site signature. 84 95 - T 05-07-2017 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 Gene3D G3DSA:1.10.520.10 444 600 3.4E-67 T 05-07-2017 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 Gene3D G3DSA:1.10.520.10 726 747 3.4E-67 T 05-07-2017 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 492 518 2.0E-55 T 05-07-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 20 42 2.0E-55 T 05-07-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 61 86 2.0E-55 T 05-07-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 46 59 2.0E-55 T 05-07-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 279 302 2.0E-55 T 05-07-2017 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 Pfam PF00141 Peroxidase 414 721 1.8E-40 T 05-07-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 Pfam PF00141 Peroxidase 68 407 1.2E-47 T 05-07-2017 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AC028_RS13275 94718bad3c8444821b99fc2a8aea7b6a 748 SUPERFAMILY SSF48113 16 440 2.97E-147 T 05-07-2017 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AC028_RS05445 e85dd07129d9b8bb1c80cca67da0d0ba 341 Gene3D G3DSA:3.40.50.720 5 186 2.1E-62 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS05445 e85dd07129d9b8bb1c80cca67da0d0ba 341 SUPERFAMILY SSF51735 6 183 3.02E-52 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS05445 e85dd07129d9b8bb1c80cca67da0d0ba 341 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 321 3.1E-47 T 05-07-2017 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AC028_RS05445 e85dd07129d9b8bb1c80cca67da0d0ba 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 7.4E-42 T 05-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AC028_RS05445 e85dd07129d9b8bb1c80cca67da0d0ba 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 7.4E-42 T 05-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AC028_RS05445 e85dd07129d9b8bb1c80cca67da0d0ba 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 7.4E-42 T 05-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AC028_RS05445 e85dd07129d9b8bb1c80cca67da0d0ba 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 7.4E-42 T 05-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AC028_RS05445 e85dd07129d9b8bb1c80cca67da0d0ba 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 7.4E-42 T 05-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AC028_RS05445 e85dd07129d9b8bb1c80cca67da0d0ba 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 7.4E-42 T 05-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AC028_RS05445 e85dd07129d9b8bb1c80cca67da0d0ba 341 SUPERFAMILY SSF48179 182 335 5.44E-52 T 05-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AC028_RS05445 e85dd07129d9b8bb1c80cca67da0d0ba 341 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 325 39.216 T 05-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AC028_RS05445 e85dd07129d9b8bb1c80cca67da0d0ba 341 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 05-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AC028_RS05445 e85dd07129d9b8bb1c80cca67da0d0ba 341 PIRSF PIRSF000114 1 335 5.8E-99 T 05-07-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AC028_RS05445 e85dd07129d9b8bb1c80cca67da0d0ba 341 Gene3D G3DSA:1.10.1040.10 187 329 1.1E-51 T 05-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AC028_RS05445 e85dd07129d9b8bb1c80cca67da0d0ba 341 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 163 1.2E-51 T 05-07-2017 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AC028_RS14850 b82a9180f2fe5ecf0028bc5bb0d5904e 456 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 394 427 3.0E-8 T 05-07-2017 IPR001451 Hexapeptide repeat AC028_RS14850 b82a9180f2fe5ecf0028bc5bb0d5904e 456 SUPERFAMILY SSF53448 5 251 6.26E-58 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS14850 b82a9180f2fe5ecf0028bc5bb0d5904e 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 4 451 40.891 T 05-07-2017 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 AC028_RS14850 b82a9180f2fe5ecf0028bc5bb0d5904e 456 Pfam PF12804 MobA-like NTP transferase domain 7 129 2.2E-23 T 05-07-2017 IPR025877 MobA-like NTP transferase AC028_RS14850 b82a9180f2fe5ecf0028bc5bb0d5904e 456 SUPERFAMILY SSF51161 255 436 1.14E-47 T 05-07-2017 IPR011004 Trimeric LpxA-like AC028_RS14850 b82a9180f2fe5ecf0028bc5bb0d5904e 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 267 295 - T 05-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AC028_RS14850 b82a9180f2fe5ecf0028bc5bb0d5904e 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 454 6.3E-186 T 05-07-2017 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 AC028_RS14850 b82a9180f2fe5ecf0028bc5bb0d5904e 456 Gene3D G3DSA:2.160.10.10 261 435 2.5E-43 T 05-07-2017 AC028_RS14850 b82a9180f2fe5ecf0028bc5bb0d5904e 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 317 348 1.7E-4 T 05-07-2017 IPR001451 Hexapeptide repeat AC028_RS14850 b82a9180f2fe5ecf0028bc5bb0d5904e 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 264 298 1.2E-7 T 05-07-2017 IPR001451 Hexapeptide repeat AC028_RS14850 b82a9180f2fe5ecf0028bc5bb0d5904e 456 Gene3D G3DSA:3.90.550.10 4 245 1.1E-64 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS12240 fe1babb76b58d685d21f25f9d795199c 317 PIRSF PIRSF002849 1 317 2.0E-120 T 05-07-2017 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted AC028_RS12240 fe1babb76b58d685d21f25f9d795199c 317 Gene3D G3DSA:1.10.8.300 211 301 5.9E-27 T 05-07-2017 AC028_RS12240 fe1babb76b58d685d21f25f9d795199c 317 SMART SM00382 46 187 0.005 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS12240 fe1babb76b58d685d21f25f9d795199c 317 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 49 179 4.5E-63 T 05-07-2017 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AC028_RS12240 fe1babb76b58d685d21f25f9d795199c 317 SUPERFAMILY SSF52540 20 292 9.0E-38 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12240 fe1babb76b58d685d21f25f9d795199c 317 Gene3D G3DSA:3.40.50.300 35 195 1.1E-37 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 SUPERFAMILY SSF52833 106 196 6.16E-22 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 3.7E-64 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 3.7E-64 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 352 376 3.7E-64 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 443 464 3.7E-64 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 477 495 3.7E-64 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 337 349 3.7E-64 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 404 420 3.7E-64 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 3.7E-64 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 315 323 3.7E-64 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 PIRSF PIRSF000238 1 520 6.1E-270 T 05-07-2017 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 Gene3D G3DSA:3.50.50.60 369 514 1.4E-36 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 344 364 - T 05-07-2017 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 SUPERFAMILY SSF51905 205 513 3.06E-54 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 Gene3D G3DSA:3.40.30.10 105 197 2.9E-34 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 Gene3D G3DSA:3.40.50.720 210 368 3.9E-28 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 Pfam PF13192 Thioredoxin domain 125 195 1.4E-8 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 SUPERFAMILY SSF52833 1 101 9.51E-31 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 Gene3D G3DSA:3.40.30.10 1 94 3.3E-32 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 516 7.9E-242 T 05-07-2017 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 503 2.1E-44 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 374 6.9E-40 T 05-07-2017 AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 467 489 6.9E-40 T 05-07-2017 AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 6.9E-40 T 05-07-2017 AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 441 457 6.9E-40 T 05-07-2017 AC028_RS11310 e113859c6fbf0606bf1e9979e299941a 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 314 332 6.9E-40 T 05-07-2017 AC028_RS14800 b0bef523c3d60bd6f9a5be902b3d8d9b 100 SUPERFAMILY SSF81333 12 86 3.27E-17 T 05-07-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AC028_RS14800 b0bef523c3d60bd6f9a5be902b3d8d9b 100 ProSitePatterns PS00605 ATP synthase c subunit signature. 47 68 - T 05-07-2017 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210 AC028_RS14800 b0bef523c3d60bd6f9a5be902b3d8d9b 100 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 27 84 7.0E-23 T 05-07-2017 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AC028_RS14800 b0bef523c3d60bd6f9a5be902b3d8d9b 100 Gene3D G3DSA:1.20.20.10 11 86 1.2E-30 T 05-07-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 AC028_RS14800 b0bef523c3d60bd6f9a5be902b3d8d9b 100 Pfam PF00137 ATP synthase subunit C 18 80 2.9E-8 T 05-07-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AC028_RS14800 b0bef523c3d60bd6f9a5be902b3d8d9b 100 Hamap MF_01396 ATP synthase subunit c [atpH]. 16 84 14.499 T 05-07-2017 AC028_RS13890 2823bb49be3094910c29cf37ff0ed30d 291 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 55 286 7.5E-31 T 05-07-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS13890 2823bb49be3094910c29cf37ff0ed30d 291 PIRSF PIRSF000770 16 291 2.1E-34 T 05-07-2017 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 AC028_RS13890 2823bb49be3094910c29cf37ff0ed30d 291 Gene3D G3DSA:1.10.601.10 22 129 1.3E-35 T 05-07-2017 AC028_RS13890 2823bb49be3094910c29cf37ff0ed30d 291 Gene3D G3DSA:1.10.10.10 231 287 6.5E-20 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS13890 2823bb49be3094910c29cf37ff0ed30d 291 SUPERFAMILY SSF88659 208 288 6.35E-16 T 05-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS13890 2823bb49be3094910c29cf37ff0ed30d 291 Pfam PF04545 Sigma-70, region 4 236 286 1.0E-14 T 05-07-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS13890 2823bb49be3094910c29cf37ff0ed30d 291 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 259 285 - T 05-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS13890 2823bb49be3094910c29cf37ff0ed30d 291 SUPERFAMILY SSF88946 22 129 4.24E-38 T 05-07-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS13890 2823bb49be3094910c29cf37ff0ed30d 291 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 21 289 5.4E-126 T 05-07-2017 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AC028_RS13890 2823bb49be3094910c29cf37ff0ed30d 291 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 8 291 54.057 T 05-07-2017 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AC028_RS13890 2823bb49be3094910c29cf37ff0ed30d 291 Pfam PF04542 Sigma-70 region 2 60 129 1.3E-16 T 05-07-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS13890 2823bb49be3094910c29cf37ff0ed30d 291 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 84 97 - T 05-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS13890 2823bb49be3094910c29cf37ff0ed30d 291 Pfam PF00140 Sigma-70 factor, region 1.2 22 53 3.1E-5 T 05-07-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS13890 2823bb49be3094910c29cf37ff0ed30d 291 PRINTS PR00046 Major sigma-70 factor signature 84 97 3.3E-19 T 05-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS13890 2823bb49be3094910c29cf37ff0ed30d 291 PRINTS PR00046 Major sigma-70 factor signature 239 251 3.3E-19 T 05-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS13890 2823bb49be3094910c29cf37ff0ed30d 291 PRINTS PR00046 Major sigma-70 factor signature 259 274 3.3E-19 T 05-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS13890 2823bb49be3094910c29cf37ff0ed30d 291 PRINTS PR00046 Major sigma-70 factor signature 274 285 3.3E-19 T 05-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS21485 8e1a3d907d1b17cf09939da524bfa7d7 106 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 101 2.7E-41 T 05-07-2017 IPR004480 Monothiol glutaredoxin-related AC028_RS21485 8e1a3d907d1b17cf09939da524bfa7d7 106 Pfam PF00462 Glutaredoxin 16 81 9.1E-17 T 05-07-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AC028_RS21485 8e1a3d907d1b17cf09939da524bfa7d7 106 Gene3D G3DSA:3.40.30.10 7 102 3.2E-31 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS21485 8e1a3d907d1b17cf09939da524bfa7d7 106 PIRSF PIRSF005894 1 106 1.7E-46 T 05-07-2017 IPR014434 Monothiol glutaredoxin AC028_RS21485 8e1a3d907d1b17cf09939da524bfa7d7 106 SUPERFAMILY SSF52833 2 102 2.93E-30 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 SUPERFAMILY SSF47384 352 434 4.12E-20 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 Pfam PF13185 GAF domain 132 266 5.9E-11 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 Pfam PF00072 Response regulator receiver domain 794 903 3.0E-14 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 Pfam PF00072 Response regulator receiver domain 671 779 1.1E-15 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 Pfam PF00072 Response regulator receiver domain 939 1048 7.7E-29 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 SMART SM00388 365 433 1.2E-22 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 SMART SM00448 937 1050 2.7E-37 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 SMART SM00448 791 905 1.6E-14 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 SMART SM00448 669 779 2.0E-19 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 Pfam PF00512 His Kinase A (phospho-acceptor) domain 366 433 4.6E-18 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 Gene3D G3DSA:3.30.565.10 435 592 3.1E-46 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 SUPERFAMILY SSF55781 127 296 5.02E-19 T 05-07-2017 IPR029016 GAF domain-like AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 SUPERFAMILY SSF52172 668 784 6.26E-26 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 SMART SM00387 480 592 1.7E-38 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 481 590 9.7E-29 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 SUPERFAMILY SSF52172 935 1055 1.35E-39 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 Gene3D G3DSA:3.40.50.2300 665 785 1.1E-24 T 05-07-2017 AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 4.6E-17 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 4.6E-17 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 531 4.6E-17 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 545 4.6E-17 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 Gene3D G3DSA:1.10.287.130 358 429 1.0E-15 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 SUPERFAMILY SSF52172 792 913 1.32E-19 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 SUPERFAMILY SSF55874 422 590 4.45E-45 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 SMART SM00065 133 276 3.6E-10 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 Gene3D G3DSA:3.40.50.2300 791 912 1.5E-19 T 05-07-2017 AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 Gene3D G3DSA:3.40.50.2300 936 1056 2.3E-41 T 05-07-2017 AC028_RS13175 b894e565f251fafafb1e720427a86ca1 1057 Gene3D G3DSA:3.30.450.40 123 280 8.0E-17 T 05-07-2017 IPR029016 GAF domain-like AC028_RS11675 0c14d1c3da4c1760e9edb9587ff534e5 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.58 T 05-07-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11675 0c14d1c3da4c1760e9edb9587ff534e5 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.6E-57 T 05-07-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11675 0c14d1c3da4c1760e9edb9587ff534e5 137 Gene3D G3DSA:3.90.1170.10 24 134 2.1E-52 T 05-07-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AC028_RS11675 0c14d1c3da4c1760e9edb9587ff534e5 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 05-07-2017 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11675 0c14d1c3da4c1760e9edb9587ff534e5 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 2.7E-39 T 05-07-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11675 0c14d1c3da4c1760e9edb9587ff534e5 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 2.7E-39 T 05-07-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11675 0c14d1c3da4c1760e9edb9587ff534e5 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 2.7E-39 T 05-07-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11675 0c14d1c3da4c1760e9edb9587ff534e5 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 2.7E-39 T 05-07-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11675 0c14d1c3da4c1760e9edb9587ff534e5 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.9E-48 T 05-07-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AC028_RS11675 0c14d1c3da4c1760e9edb9587ff534e5 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 05-07-2017 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11675 0c14d1c3da4c1760e9edb9587ff534e5 137 SUPERFAMILY SSF54686 1 134 4.19E-54 T 05-07-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AC028_RS14870 497594d19c9fbaccd7d1032f91a1cbf9 408 Pfam PF02687 FtsX-like permease family 292 399 9.7E-16 T 05-07-2017 IPR003838 ABC transporter permease protein domain GO:0016020 AC028_RS06505 c0fd1c7a1a59ed181665d331a9ad20c8 209 PIRSF PIRSF035805 1 197 6.7E-51 T 05-07-2017 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 AC028_RS06505 c0fd1c7a1a59ed181665d331a9ad20c8 209 Hamap MF_00124 Thymidine kinase [tdk]. 1 190 33.446 T 05-07-2017 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 AC028_RS06505 c0fd1c7a1a59ed181665d331a9ad20c8 209 Gene3D G3DSA:3.30.60.20 143 190 4.6E-11 T 05-07-2017 AC028_RS06505 c0fd1c7a1a59ed181665d331a9ad20c8 209 Pfam PF00265 Thymidine kinase 2 185 1.3E-48 T 05-07-2017 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 AC028_RS06505 c0fd1c7a1a59ed181665d331a9ad20c8 209 SUPERFAMILY SSF52540 1 142 5.75E-40 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06505 c0fd1c7a1a59ed181665d331a9ad20c8 209 SUPERFAMILY SSF57716 143 195 2.8E-13 T 05-07-2017 AC028_RS01190 73f4231ad96fa62c3b223b6c59719982 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 312 7.0E-136 T 05-07-2017 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AC028_RS01190 73f4231ad96fa62c3b223b6c59719982 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 9.4E-72 T 05-07-2017 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AC028_RS01190 73f4231ad96fa62c3b223b6c59719982 316 SUPERFAMILY SSF52440 3 123 1.15E-37 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS01190 73f4231ad96fa62c3b223b6c59719982 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 121 8.8E-39 T 05-07-2017 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AC028_RS01190 73f4231ad96fa62c3b223b6c59719982 316 Gene3D G3DSA:3.40.50.20 3 130 5.4E-47 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS01190 73f4231ad96fa62c3b223b6c59719982 316 Gene3D G3DSA:3.30.1490.20 138 192 5.1E-25 T 05-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AC028_RS01190 73f4231ad96fa62c3b223b6c59719982 316 SUPERFAMILY SSF56059 124 311 1.91E-53 T 05-07-2017 AC028_RS01190 73f4231ad96fa62c3b223b6c59719982 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 154.489 T 05-07-2017 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AC028_RS01190 73f4231ad96fa62c3b223b6c59719982 316 Gene3D G3DSA:3.30.470.20 193 300 7.3E-46 T 05-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AC028_RS13310 3ae983784776d66b8c73994717e59144 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 8.9E-24 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13310 3ae983784776d66b8c73994717e59144 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 8.9E-24 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13310 3ae983784776d66b8c73994717e59144 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 8.9E-24 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13310 3ae983784776d66b8c73994717e59144 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 8.9E-24 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13310 3ae983784776d66b8c73994717e59144 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 8.9E-24 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13310 3ae983784776d66b8c73994717e59144 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 8.9E-24 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13310 3ae983784776d66b8c73994717e59144 263 Gene3D G3DSA:3.40.50.720 5 255 6.1E-54 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS13310 3ae983784776d66b8c73994717e59144 263 SUPERFAMILY SSF51735 5 256 4.71E-52 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS13310 3ae983784776d66b8c73994717e59144 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 254 2.8E-35 T 05-07-2017 AC028_RS11740 e5e7b35003aa1da168c7d86cb84eae78 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 4.5E-88 T 05-07-2017 AC028_RS11740 e5e7b35003aa1da168c7d86cb84eae78 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 4.5E-88 T 05-07-2017 AC028_RS11740 e5e7b35003aa1da168c7d86cb84eae78 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 182 205 4.5E-88 T 05-07-2017 AC028_RS11740 e5e7b35003aa1da168c7d86cb84eae78 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 375 393 4.5E-88 T 05-07-2017 AC028_RS11740 e5e7b35003aa1da168c7d86cb84eae78 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 274 293 4.5E-88 T 05-07-2017 AC028_RS11740 e5e7b35003aa1da168c7d86cb84eae78 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 320 342 4.5E-88 T 05-07-2017 AC028_RS11740 e5e7b35003aa1da168c7d86cb84eae78 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 4.5E-88 T 05-07-2017 AC028_RS11740 e5e7b35003aa1da168c7d86cb84eae78 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 156 181 4.5E-88 T 05-07-2017 AC028_RS11740 e5e7b35003aa1da168c7d86cb84eae78 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 407 425 4.5E-88 T 05-07-2017 AC028_RS11740 e5e7b35003aa1da168c7d86cb84eae78 454 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 05-07-2017 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AC028_RS11740 e5e7b35003aa1da168c7d86cb84eae78 454 Gene3D G3DSA:1.10.3370.10 16 442 2.0E-155 T 05-07-2017 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AC028_RS11740 e5e7b35003aa1da168c7d86cb84eae78 454 ProSitePatterns PS00756 Protein secY signature 2. 175 192 - T 05-07-2017 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AC028_RS11740 e5e7b35003aa1da168c7d86cb84eae78 454 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 434 5.6E-124 T 05-07-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AC028_RS11740 e5e7b35003aa1da168c7d86cb84eae78 454 PIRSF PIRSF004557 14 446 2.6E-115 T 05-07-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AC028_RS11740 e5e7b35003aa1da168c7d86cb84eae78 454 Pfam PF00344 SecY translocase 76 421 1.8E-108 T 05-07-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AC028_RS11740 e5e7b35003aa1da168c7d86cb84eae78 454 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 438 28.094 T 05-07-2017 IPR026593 Protein translocase subunit SecY AC028_RS11740 e5e7b35003aa1da168c7d86cb84eae78 454 SUPERFAMILY SSF103491 15 429 8.76E-122 T 05-07-2017 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 SUPERFAMILY SSF82693 40 134 1.52E-22 T 05-07-2017 AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 Gene3D G3DSA:3.30.70.1430 556 647 4.6E-7 T 05-07-2017 AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 SUPERFAMILY SSF82693 136 181 6.8E-22 T 05-07-2017 AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 SUPERFAMILY SSF82693 268 324 6.8E-22 T 05-07-2017 AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 Gene3D G3DSA:3.30.2090.10 707 791 2.6E-20 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 SUPERFAMILY SSF82714 182 265 3.4E-18 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 Gene3D G3DSA:3.30.2090.10 181 267 9.1E-24 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 1.2E-64 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.2E-64 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.2E-64 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 1.2E-64 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 1.2E-64 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 1.2E-64 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 1.2E-64 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 PRINTS PR00702 Acriflavin resistance protein family signature 613 627 1.2E-64 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 Gene3D G3DSA:3.30.70.1430 40 141 6.8E-28 T 05-07-2017 AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 Gene3D G3DSA:1.10.3850.10 799 1011 1.8E-65 T 05-07-2017 AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 SUPERFAMILY SSF82866 793 1014 3.14E-50 T 05-07-2017 AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 SUPERFAMILY SSF82714 707 791 5.49E-19 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 Pfam PF00873 AcrB/AcrD/AcrF family 4 1011 3.4E-297 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 SUPERFAMILY SSF82866 291 488 1.31E-43 T 05-07-2017 AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 SUPERFAMILY SSF82693 554 651 7.32E-14 T 05-07-2017 AC028_RS02160 f789e8836bc1986811ea503c04b1935e 1039 Gene3D G3DSA:1.20.1640.10 286 497 2.3E-54 T 05-07-2017 AC028_RS15495 77c0d0a290c82cf0fb54cc3cc514c5dd 231 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 15 133 5.8E-24 T 05-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AC028_RS15495 77c0d0a290c82cf0fb54cc3cc514c5dd 231 SUPERFAMILY SSF49354 10 132 1.07E-25 T 05-07-2017 IPR008962 PapD-like AC028_RS15495 77c0d0a290c82cf0fb54cc3cc514c5dd 231 Gene3D G3DSA:2.60.40.360 15 132 2.8E-18 T 05-07-2017 IPR008962 PapD-like AC028_RS08200 2a677785ad6d4bc5e468ff980ba42ce7 420 PIRSF PIRSF029171 1 420 2.1E-97 T 05-07-2017 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 AC028_RS08200 2a677785ad6d4bc5e468ff980ba42ce7 420 Gene3D G3DSA:3.40.50.1820 317 380 2.6E-16 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS08200 2a677785ad6d4bc5e468ff980ba42ce7 420 Gene3D G3DSA:3.40.50.1820 81 240 2.6E-16 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS08200 2a677785ad6d4bc5e468ff980ba42ce7 420 Pfam PF03583 Secretory lipase 132 219 1.7E-7 T 05-07-2017 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 AC028_RS08200 2a677785ad6d4bc5e468ff980ba42ce7 420 SUPERFAMILY SSF53474 128 382 3.06E-18 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS13180 87a35d3538419b360d63cd97a2cb0161 387 SUPERFAMILY SSF55874 211 380 6.42E-35 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13180 87a35d3538419b360d63cd97a2cb0161 387 Gene3D G3DSA:3.30.450.20 30 132 5.6E-19 T 05-07-2017 AC028_RS13180 87a35d3538419b360d63cd97a2cb0161 387 SUPERFAMILY SSF47384 150 218 8.63E-8 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS13180 87a35d3538419b360d63cd97a2cb0161 387 Gene3D G3DSA:3.30.565.10 220 380 3.1E-33 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13180 87a35d3538419b360d63cd97a2cb0161 387 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 28 138 2.5E-17 T 05-07-2017 IPR000014 PAS domain AC028_RS13180 87a35d3538419b360d63cd97a2cb0161 387 Pfam PF13426 PAS domain 32 132 7.1E-8 T 05-07-2017 IPR000014 PAS domain AC028_RS13180 87a35d3538419b360d63cd97a2cb0161 387 SMART SM00388 155 221 6.3E-6 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS13180 87a35d3538419b360d63cd97a2cb0161 387 SMART SM00387 262 382 9.0E-21 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13180 87a35d3538419b360d63cd97a2cb0161 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 379 2.8E-12 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS13180 87a35d3538419b360d63cd97a2cb0161 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 339 2.8E-12 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS13180 87a35d3538419b360d63cd97a2cb0161 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 360 2.8E-12 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS13180 87a35d3538419b360d63cd97a2cb0161 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 325 2.8E-12 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS13180 87a35d3538419b360d63cd97a2cb0161 387 SMART SM00091 18 85 0.0085 T 05-07-2017 IPR000014 PAS domain AC028_RS13180 87a35d3538419b360d63cd97a2cb0161 387 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 263 380 1.0E-12 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13180 87a35d3538419b360d63cd97a2cb0161 387 SUPERFAMILY SSF55785 31 142 1.51E-20 T 05-07-2017 IPR000014 PAS domain AC028_RS13180 87a35d3538419b360d63cd97a2cb0161 387 Gene3D G3DSA:1.10.287.130 151 217 1.6E-4 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS20710 872118068f836d8c332f1c8cd03668d6 782 SUPERFAMILY SSF53706 48 632 7.46E-144 T 05-07-2017 AC028_RS20710 872118068f836d8c332f1c8cd03668d6 782 Gene3D G3DSA:3.40.50.740 395 626 2.9E-52 T 05-07-2017 AC028_RS20710 872118068f836d8c332f1c8cd03668d6 782 Gene3D G3DSA:3.40.50.740 109 182 2.9E-52 T 05-07-2017 AC028_RS20710 872118068f836d8c332f1c8cd03668d6 782 SUPERFAMILY SSF50692 645 767 1.97E-17 T 05-07-2017 IPR009010 Aspartate decarboxylase-like domain AC028_RS20710 872118068f836d8c332f1c8cd03668d6 782 Pfam PF01568 Molydopterin dinucleotide binding domain 650 757 3.4E-10 T 05-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AC028_RS20710 872118068f836d8c332f1c8cd03668d6 782 Gene3D G3DSA:2.40.40.20 646 762 1.7E-8 T 05-07-2017 AC028_RS20710 872118068f836d8c332f1c8cd03668d6 782 Gene3D G3DSA:3.40.228.10 183 394 7.8E-53 T 05-07-2017 AC028_RS20710 872118068f836d8c332f1c8cd03668d6 782 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 13 762 1.5E-287 T 05-07-2017 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 AC028_RS20710 872118068f836d8c332f1c8cd03668d6 782 PIRSF PIRSF000144 1 768 0.0 T 05-07-2017 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 AC028_RS20710 872118068f836d8c332f1c8cd03668d6 782 Pfam PF00384 Molybdopterin oxidoreductase 109 494 1.4E-26 T 05-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS08335 74403f9dfb3c95a7dfab0b2e6153ece1 306 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 297 1.1E-64 T 05-07-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AC028_RS08335 74403f9dfb3c95a7dfab0b2e6153ece1 306 SUPERFAMILY SSF53335 54 298 1.92E-38 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS08335 74403f9dfb3c95a7dfab0b2e6153ece1 306 PIRSF PIRSF000401 1 306 3.5E-95 T 05-07-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AC028_RS08335 74403f9dfb3c95a7dfab0b2e6153ece1 306 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 304 30.593 T 05-07-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AC028_RS08335 74403f9dfb3c95a7dfab0b2e6153ece1 306 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 304 4.5E-90 T 05-07-2017 AC028_RS08335 74403f9dfb3c95a7dfab0b2e6153ece1 306 Gene3D G3DSA:3.40.50.150 121 298 2.3E-35 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS13675 35b943693d9b9050dbf636e6ca69f3cd 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 4.1E-16 T 05-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS13675 35b943693d9b9050dbf636e6ca69f3cd 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 4.1E-16 T 05-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS13675 35b943693d9b9050dbf636e6ca69f3cd 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 4.1E-16 T 05-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS13675 35b943693d9b9050dbf636e6ca69f3cd 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 4.1E-16 T 05-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS13675 35b943693d9b9050dbf636e6ca69f3cd 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 44 1.0E-9 T 05-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS13675 35b943693d9b9050dbf636e6ca69f3cd 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 05-07-2017 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS13675 35b943693d9b9050dbf636e6ca69f3cd 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 22.259 T 05-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS13675 35b943693d9b9050dbf636e6ca69f3cd 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 3.8E-24 T 05-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS13675 35b943693d9b9050dbf636e6ca69f3cd 71 Pfam PF01165 Ribosomal protein S21 3 56 2.9E-22 T 05-07-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS21690 d2074fbd94f2e569deb571c3a5ed158b 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 05-07-2017 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AC028_RS21690 d2074fbd94f2e569deb571c3a5ed158b 268 Pfam PF00290 Tryptophan synthase alpha chain 8 256 5.1E-83 T 05-07-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AC028_RS21690 d2074fbd94f2e569deb571c3a5ed158b 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 257 3.9E-70 T 05-07-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AC028_RS21690 d2074fbd94f2e569deb571c3a5ed158b 268 SUPERFAMILY SSF51366 1 244 1.98E-84 T 05-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AC028_RS21690 d2074fbd94f2e569deb571c3a5ed158b 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 264 34.339 T 05-07-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AC028_RS21690 d2074fbd94f2e569deb571c3a5ed158b 268 Gene3D G3DSA:3.20.20.70 1 266 8.6E-96 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS11660 d7c48c869128bf389f8698c65ad6869e 89 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 87 2.0E-42 T 05-07-2017 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AC028_RS11660 d7c48c869128bf389f8698c65ad6869e 89 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 87 25.188 T 05-07-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11660 d7c48c869128bf389f8698c65ad6869e 89 ProSitePatterns PS00323 Ribosomal protein S19 signature. 51 75 - T 05-07-2017 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11660 d7c48c869128bf389f8698c65ad6869e 89 SUPERFAMILY SSF54570 3 82 6.15E-34 T 05-07-2017 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11660 d7c48c869128bf389f8698c65ad6869e 89 PRINTS PR00975 Ribosomal protein S19 family signature 51 63 1.2E-22 T 05-07-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11660 d7c48c869128bf389f8698c65ad6869e 89 PRINTS PR00975 Ribosomal protein S19 family signature 63 78 1.2E-22 T 05-07-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11660 d7c48c869128bf389f8698c65ad6869e 89 PRINTS PR00975 Ribosomal protein S19 family signature 31 50 1.2E-22 T 05-07-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11660 d7c48c869128bf389f8698c65ad6869e 89 Pfam PF00203 Ribosomal protein S19 3 81 2.8E-36 T 05-07-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11660 d7c48c869128bf389f8698c65ad6869e 89 Gene3D G3DSA:3.30.860.10 1 87 2.9E-39 T 05-07-2017 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11660 d7c48c869128bf389f8698c65ad6869e 89 PIRSF PIRSF002144 1 89 4.4E-32 T 05-07-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS03100 5f48dad6ffff9ee3f74951f94323c08d 392 PIRSF PIRSF000484 1 371 2.2E-69 T 05-07-2017 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AC028_RS03100 5f48dad6ffff9ee3f74951f94323c08d 392 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 2 386 1.4E-139 T 05-07-2017 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AC028_RS03100 5f48dad6ffff9ee3f74951f94323c08d 392 SUPERFAMILY SSF54675 1 136 1.18E-43 T 05-07-2017 AC028_RS03100 5f48dad6ffff9ee3f74951f94323c08d 392 SUPERFAMILY SSF51690 118 386 2.55E-88 T 05-07-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AC028_RS03100 5f48dad6ffff9ee3f74951f94323c08d 392 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 161 386 1.4E-76 T 05-07-2017 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AC028_RS03100 5f48dad6ffff9ee3f74951f94323c08d 392 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 388 47.09 T 05-07-2017 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AC028_RS03100 5f48dad6ffff9ee3f74951f94323c08d 392 Gene3D G3DSA:3.20.140.10 1 370 1.4E-141 T 05-07-2017 AC028_RS14860 661c1571fcb362cf9a310f8b0d9086d1 447 SUPERFAMILY SSF46689 359 444 1.12E-9 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS14860 661c1571fcb362cf9a310f8b0d9086d1 447 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 05-07-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AC028_RS14860 661c1571fcb362cf9a310f8b0d9086d1 447 SMART SM00382 174 317 1.6E-10 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS14860 661c1571fcb362cf9a310f8b0d9086d1 447 SUPERFAMILY SSF52540 156 387 1.84E-60 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS14860 661c1571fcb362cf9a310f8b0d9086d1 447 Gene3D G3DSA:1.10.10.60 392 444 7.1E-12 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS14860 661c1571fcb362cf9a310f8b0d9086d1 447 Gene3D G3DSA:3.40.50.300 157 325 3.2E-47 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS14860 661c1571fcb362cf9a310f8b0d9086d1 447 Pfam PF02954 Bacterial regulatory protein, Fis family 407 442 2.5E-12 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS14860 661c1571fcb362cf9a310f8b0d9086d1 447 Pfam PF00072 Response regulator receiver domain 4 118 2.7E-18 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS14860 661c1571fcb362cf9a310f8b0d9086d1 447 SMART SM00448 2 118 3.7E-15 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS14860 661c1571fcb362cf9a310f8b0d9086d1 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 05-07-2017 IPR025944 Sigma-54 interaction domain, conserved site AC028_RS14860 661c1571fcb362cf9a310f8b0d9086d1 447 SUPERFAMILY SSF52172 3 196 5.69E-30 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS14860 661c1571fcb362cf9a310f8b0d9086d1 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 408 425 3.1E-8 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS14860 661c1571fcb362cf9a310f8b0d9086d1 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 445 3.1E-8 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS14860 661c1571fcb362cf9a310f8b0d9086d1 447 Gene3D G3DSA:1.10.8.60 327 388 2.2E-19 T 05-07-2017 AC028_RS14860 661c1571fcb362cf9a310f8b0d9086d1 447 Gene3D G3DSA:3.40.50.2300 2 135 5.0E-28 T 05-07-2017 AC028_RS14860 661c1571fcb362cf9a310f8b0d9086d1 447 Pfam PF00158 Sigma-54 interaction domain 158 320 2.0E-63 T 05-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AC028_RS01400 e6014de988b90cb850c60d884319eb78 439 SUPERFAMILY SSF52964 34 164 6.15E-35 T 05-07-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AC028_RS01400 e6014de988b90cb850c60d884319eb78 439 Gene3D G3DSA:3.40.50.10070 27 155 1.1E-45 T 05-07-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AC028_RS01400 e6014de988b90cb850c60d884319eb78 439 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 21 433 1.9E-159 T 05-07-2017 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AC028_RS01400 e6014de988b90cb850c60d884319eb78 439 Hamap MF_00671 Protein TolB [tolB]. 8 432 36.576 T 05-07-2017 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AC028_RS01400 e6014de988b90cb850c60d884319eb78 439 Gene3D G3DSA:2.130.10.10 156 434 1.1E-71 T 05-07-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AC028_RS01400 e6014de988b90cb850c60d884319eb78 439 Pfam PF07676 WD40-like Beta Propeller Repeat 284 320 1.2E-14 T 05-07-2017 IPR011659 WD40-like Beta Propeller AC028_RS01400 e6014de988b90cb850c60d884319eb78 439 Pfam PF07676 WD40-like Beta Propeller Repeat 243 276 1.3E-8 T 05-07-2017 IPR011659 WD40-like Beta Propeller AC028_RS01400 e6014de988b90cb850c60d884319eb78 439 Pfam PF07676 WD40-like Beta Propeller Repeat 209 231 7.7E-6 T 05-07-2017 IPR011659 WD40-like Beta Propeller AC028_RS01400 e6014de988b90cb850c60d884319eb78 439 SUPERFAMILY SSF69304 157 434 3.01E-53 T 05-07-2017 AC028_RS01400 e6014de988b90cb850c60d884319eb78 439 Pfam PF04052 TolB amino-terminal domain 27 131 2.5E-30 T 05-07-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AC028_RS12440 addb10add305f5307ca60a8989f9a7e2 287 SMART SM00244 19 184 1.1E-16 T 05-07-2017 IPR001107 Band 7 domain AC028_RS12440 addb10add305f5307ca60a8989f9a7e2 287 Pfam PF01145 SPFH domain / Band 7 family 23 201 6.5E-24 T 05-07-2017 IPR001107 Band 7 domain AC028_RS12440 addb10add305f5307ca60a8989f9a7e2 287 PIRSF PIRSF005651 1 287 4.0E-81 T 05-07-2017 IPR010200 HflC GO:0016021|GO:0052547 AC028_RS12440 addb10add305f5307ca60a8989f9a7e2 287 SUPERFAMILY SSF117892 51 190 9.02E-20 T 05-07-2017 IPR001107 Band 7 domain AC028_RS22220 94e831d1fa62ab5c6e34d736ded24f1d 302 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 288 39.75 T 05-07-2017 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AC028_RS22220 94e831d1fa62ab5c6e34d736ded24f1d 302 SUPERFAMILY SSF53335 8 297 1.56E-79 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS22220 94e831d1fa62ab5c6e34d736ded24f1d 302 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 298 7.1E-97 T 05-07-2017 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AC028_RS22220 94e831d1fa62ab5c6e34d736ded24f1d 302 Gene3D G3DSA:3.40.50.150 1 300 2.1E-101 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS01415 d4d632ea8aa4062e18759de58385ed97 259 TIGRFAM TIGR02796 tolQ: protein TolQ 38 253 1.4E-87 T 05-07-2017 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 AC028_RS01415 d4d632ea8aa4062e18759de58385ed97 259 Pfam PF01618 MotA/TolQ/ExbB proton channel family 112 241 4.0E-38 T 05-07-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AC028_RS10550 77fb456a15262c4d13cfcb6f60b2198d 461 Gene3D G3DSA:1.10.45.10 418 457 1.7E-15 T 05-07-2017 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AC028_RS10550 77fb456a15262c4d13cfcb6f60b2198d 461 SUPERFAMILY SSF55103 192 460 6.38E-64 T 05-07-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AC028_RS10550 77fb456a15262c4d13cfcb6f60b2198d 461 Pfam PF01565 FAD binding domain 43 182 7.3E-43 T 05-07-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AC028_RS10550 77fb456a15262c4d13cfcb6f60b2198d 461 Gene3D G3DSA:3.30.465.10 99 218 1.5E-41 T 05-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AC028_RS10550 77fb456a15262c4d13cfcb6f60b2198d 461 SUPERFAMILY SSF56176 9 217 7.01E-70 T 05-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AC028_RS10550 77fb456a15262c4d13cfcb6f60b2198d 461 Gene3D G3DSA:3.30.43.10 6 98 1.4E-25 T 05-07-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AC028_RS10550 77fb456a15262c4d13cfcb6f60b2198d 461 Pfam PF02913 FAD linked oxidases, C-terminal domain 225 457 8.8E-67 T 05-07-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AC028_RS15565 15a4e9673c59c903000fc62325bfc9bf 283 SUPERFAMILY SSF46689 223 269 1.4E-7 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS15565 15a4e9673c59c903000fc62325bfc9bf 283 SMART SM00342 186 268 9.0E-23 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS15565 15a4e9673c59c903000fc62325bfc9bf 283 Pfam PF02311 AraC-like ligand binding domain 32 99 1.4E-8 T 05-07-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AC028_RS15565 15a4e9673c59c903000fc62325bfc9bf 283 Gene3D G3DSA:2.60.120.10 43 100 4.9E-8 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS15565 15a4e9673c59c903000fc62325bfc9bf 283 Gene3D G3DSA:1.10.10.60 224 267 2.0E-9 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS15565 15a4e9673c59c903000fc62325bfc9bf 283 Gene3D G3DSA:1.10.10.60 166 223 6.7E-14 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS15565 15a4e9673c59c903000fc62325bfc9bf 283 Pfam PF12833 Helix-turn-helix domain 193 269 2.6E-21 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS15565 15a4e9673c59c903000fc62325bfc9bf 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 252 2.5E-5 T 05-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AC028_RS15565 15a4e9673c59c903000fc62325bfc9bf 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 268 2.5E-5 T 05-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AC028_RS15565 15a4e9673c59c903000fc62325bfc9bf 283 SUPERFAMILY SSF51182 27 200 4.89E-18 T 05-07-2017 IPR011051 RmlC-like cupin domain AC028_RS03980 f8dd3644854318a32c8cdbb596c04582 693 Gene3D G3DSA:3.90.226.10 12 209 7.9E-63 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS03980 f8dd3644854318a32c8cdbb596c04582 693 Gene3D G3DSA:1.10.1040.10 612 690 1.5E-11 T 05-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AC028_RS03980 f8dd3644854318a32c8cdbb596c04582 693 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 319 491 3.3E-46 T 05-07-2017 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 AC028_RS03980 f8dd3644854318a32c8cdbb596c04582 693 SUPERFAMILY SSF48179 603 681 3.83E-16 T 05-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AC028_RS03980 f8dd3644854318a32c8cdbb596c04582 693 Gene3D G3DSA:3.40.50.720 312 497 4.5E-46 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS03980 f8dd3644854318a32c8cdbb596c04582 693 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 586 3.0E-16 T 05-07-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 AC028_RS03980 f8dd3644854318a32c8cdbb596c04582 693 SUPERFAMILY SSF51735 316 495 1.67E-43 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS03980 f8dd3644854318a32c8cdbb596c04582 693 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 207 3.6E-38 T 05-07-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AC028_RS03980 f8dd3644854318a32c8cdbb596c04582 693 SUPERFAMILY SSF48179 495 595 2.13E-22 T 05-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AC028_RS03980 f8dd3644854318a32c8cdbb596c04582 693 Gene3D G3DSA:1.10.1040.10 498 587 5.2E-20 T 05-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AC028_RS03980 f8dd3644854318a32c8cdbb596c04582 693 SUPERFAMILY SSF52096 10 304 6.84E-67 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS17680 253b71756d27be84c9a72adfb6bee970 421 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 19 409 1.7E-116 T 05-07-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AC028_RS17680 253b71756d27be84c9a72adfb6bee970 421 PIRSF PIRSF004640 12 419 1.4E-124 T 05-07-2017 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AC028_RS17680 253b71756d27be84c9a72adfb6bee970 421 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 17 411 28.996 T 05-07-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AC028_RS17680 253b71756d27be84c9a72adfb6bee970 421 Pfam PF04551 GcpE protein 22 409 1.1E-107 T 05-07-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AC028_RS11945 44519965b1ac315f7c2a2175724ccbbe 248 Pfam PF02674 Colicin V production protein 2 140 8.5E-30 T 05-07-2017 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AC028_RS10640 9e2fdde2a49a07258a5b1602dd88d50a 477 SUPERFAMILY SSF51984 17 102 5.36E-28 T 05-07-2017 AC028_RS10640 9e2fdde2a49a07258a5b1602dd88d50a 477 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 15 473 43.248 T 05-07-2017 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS10640 9e2fdde2a49a07258a5b1602dd88d50a 477 Gene3D G3DSA:3.40.50.720 17 102 4.6E-35 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS10640 9e2fdde2a49a07258a5b1602dd88d50a 477 Gene3D G3DSA:3.90.190.20 322 469 6.4E-52 T 05-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AC028_RS10640 9e2fdde2a49a07258a5b1602dd88d50a 477 Pfam PF08245 Mur ligase middle domain 120 299 9.9E-28 T 05-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AC028_RS10640 9e2fdde2a49a07258a5b1602dd88d50a 477 Gene3D G3DSA:3.40.1190.10 104 321 1.9E-82 T 05-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AC028_RS10640 9e2fdde2a49a07258a5b1602dd88d50a 477 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 410 2.4E-18 T 05-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AC028_RS10640 9e2fdde2a49a07258a5b1602dd88d50a 477 SUPERFAMILY SSF53244 319 468 4.21E-44 T 05-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AC028_RS10640 9e2fdde2a49a07258a5b1602dd88d50a 477 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 18 467 6.7E-162 T 05-07-2017 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS10640 9e2fdde2a49a07258a5b1602dd88d50a 477 Pfam PF01225 Mur ligase family, catalytic domain 18 115 6.1E-27 T 05-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AC028_RS10640 9e2fdde2a49a07258a5b1602dd88d50a 477 SUPERFAMILY SSF53623 101 317 3.92E-70 T 05-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AC028_RS18840 44f24cb398b21884e2546b0204898449 380 SMART SM00450 6 102 2.7E-9 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS18840 44f24cb398b21884e2546b0204898449 380 SUPERFAMILY SSF69572 114 362 4.05E-96 T 05-07-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AC028_RS18840 44f24cb398b21884e2546b0204898449 380 SUPERFAMILY SSF52821 4 105 1.26E-22 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS18840 44f24cb398b21884e2546b0204898449 380 Gene3D G3DSA:3.40.50.720 115 360 1.8E-78 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS18840 44f24cb398b21884e2546b0204898449 380 Gene3D G3DSA:3.40.250.10 4 106 9.2E-21 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS18840 44f24cb398b21884e2546b0204898449 380 Pfam PF00581 Rhodanese-like domain 17 98 5.1E-7 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS18840 44f24cb398b21884e2546b0204898449 380 Pfam PF00899 ThiF family 119 356 2.4E-70 T 05-07-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AC028_RS17150 1f30242f08d956c43388c950042cf338 415 Pfam PF01979 Amidohydrolase family 162 331 3.9E-10 T 05-07-2017 IPR006680 Amidohydrolase-related GO:0016787 AC028_RS17150 1f30242f08d956c43388c950042cf338 415 Gene3D G3DSA:2.30.40.10 310 343 2.6E-6 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS17150 1f30242f08d956c43388c950042cf338 415 Gene3D G3DSA:2.30.40.10 4 65 4.0E-9 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS17150 1f30242f08d956c43388c950042cf338 415 Gene3D G3DSA:3.20.20.140 174 309 3.5E-23 T 05-07-2017 AC028_RS17150 1f30242f08d956c43388c950042cf338 415 SUPERFAMILY SSF51556 55 299 5.11E-27 T 05-07-2017 IPR032466 Metal-dependent hydrolase AC028_RS17150 1f30242f08d956c43388c950042cf338 415 SUPERFAMILY SSF51338 6 56 6.17E-11 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS17150 1f30242f08d956c43388c950042cf338 415 SUPERFAMILY SSF51338 302 352 6.17E-11 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS04940 65deba4527dca73c12748038c0542e1c 655 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 8 520 3.1E-180 T 05-07-2017 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AC028_RS04940 65deba4527dca73c12748038c0542e1c 655 Pfam PF05954 Phage late control gene D protein (GPD) 24 330 2.0E-80 T 05-07-2017 AC028_RS04940 65deba4527dca73c12748038c0542e1c 655 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 17 503 1.6E-129 T 05-07-2017 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AC028_RS04940 65deba4527dca73c12748038c0542e1c 655 SUPERFAMILY SSF69279 8 182 4.31E-49 T 05-07-2017 AC028_RS04940 65deba4527dca73c12748038c0542e1c 655 SUPERFAMILY SSF69255 363 450 2.35E-29 T 05-07-2017 AC028_RS04940 65deba4527dca73c12748038c0542e1c 655 SUPERFAMILY SSF69349 440 655 2.51E-39 T 05-07-2017 AC028_RS04940 65deba4527dca73c12748038c0542e1c 655 SUPERFAMILY SSF69279 191 360 2.47E-22 T 05-07-2017 AC028_RS04940 65deba4527dca73c12748038c0542e1c 655 Gene3D G3DSA:2.40.50.230 369 450 9.7E-34 T 05-07-2017 IPR006531 Gp5 N-terminal AC028_RS04940 65deba4527dca73c12748038c0542e1c 655 Gene3D G3DSA:3.55.50.10 96 187 1.9E-35 T 05-07-2017 AC028_RS05230 94663a855419824c74664a857e130a92 245 SUPERFAMILY SSF52540 1 237 5.66E-68 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS05230 94663a855419824c74664a857e130a92 245 Pfam PF00005 ABC transporter 17 162 3.5E-33 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS05230 94663a855419824c74664a857e130a92 245 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS05230 94663a855419824c74664a857e130a92 245 Gene3D G3DSA:3.40.50.300 3 237 6.2E-72 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS05230 94663a855419824c74664a857e130a92 245 SMART SM00382 26 220 5.3E-13 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS00150 2e52ead729e964a134605cca3fc6d486 335 Gene3D G3DSA:3.90.180.10 1 166 8.1E-35 T 05-07-2017 IPR011032 GroES-like AC028_RS00150 2e52ead729e964a134605cca3fc6d486 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 5.4E-7 T 05-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AC028_RS00150 2e52ead729e964a134605cca3fc6d486 335 Pfam PF00107 Zinc-binding dehydrogenase 170 295 1.9E-31 T 05-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AC028_RS00150 2e52ead729e964a134605cca3fc6d486 335 Gene3D G3DSA:3.40.50.720 167 281 1.0E-36 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS00150 2e52ead729e964a134605cca3fc6d486 335 SMART SM00829 13 333 1.0E-19 T 05-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AC028_RS00150 2e52ead729e964a134605cca3fc6d486 335 SUPERFAMILY SSF51735 136 307 1.07E-47 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS00150 2e52ead729e964a134605cca3fc6d486 335 SUPERFAMILY SSF50129 1 164 2.04E-30 T 05-07-2017 IPR011032 GroES-like AC028_RS03370 55de3485b897a0671132772cb3fb3285 564 SUPERFAMILY SSF55681 403 474 2.21E-100 T 05-07-2017 AC028_RS03370 55de3485b897a0671132772cb3fb3285 564 SUPERFAMILY SSF55681 10 237 2.21E-100 T 05-07-2017 AC028_RS03370 55de3485b897a0671132772cb3fb3285 564 Gene3D G3DSA:3.30.930.10 11 234 3.2E-99 T 05-07-2017 AC028_RS03370 55de3485b897a0671132772cb3fb3285 564 Gene3D G3DSA:3.30.930.10 386 468 3.2E-99 T 05-07-2017 AC028_RS03370 55de3485b897a0671132772cb3fb3285 564 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 563 39.239 T 05-07-2017 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AC028_RS03370 55de3485b897a0671132772cb3fb3285 564 Pfam PF03129 Anticodon binding domain 471 555 5.2E-13 T 05-07-2017 IPR004154 Anticodon-binding AC028_RS03370 55de3485b897a0671132772cb3fb3285 564 Pfam PF04073 Aminoacyl-tRNA editing domain 256 375 2.1E-30 T 05-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AC028_RS03370 55de3485b897a0671132772cb3fb3285 564 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 556 7.7E-212 T 05-07-2017 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AC028_RS03370 55de3485b897a0671132772cb3fb3285 564 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 455 4.2E-44 T 05-07-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS03370 55de3485b897a0671132772cb3fb3285 564 Gene3D G3DSA:3.40.50.800 469 558 6.3E-21 T 05-07-2017 IPR004154 Anticodon-binding AC028_RS03370 55de3485b897a0671132772cb3fb3285 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 6.8E-16 T 05-07-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AC028_RS03370 55de3485b897a0671132772cb3fb3285 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 6.8E-16 T 05-07-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AC028_RS03370 55de3485b897a0671132772cb3fb3285 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 6.8E-16 T 05-07-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AC028_RS03370 55de3485b897a0671132772cb3fb3285 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 6.8E-16 T 05-07-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AC028_RS03370 55de3485b897a0671132772cb3fb3285 564 SUPERFAMILY SSF55826 219 386 6.02E-34 T 05-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AC028_RS03370 55de3485b897a0671132772cb3fb3285 564 Gene3D G3DSA:3.90.960.10 252 385 4.1E-32 T 05-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AC028_RS03370 55de3485b897a0671132772cb3fb3285 564 SUPERFAMILY SSF52954 460 562 1.42E-23 T 05-07-2017 IPR004154 Anticodon-binding AC028_RS02090 89cfb62e746b620f28e960812475041b 893 SUPERFAMILY SSF55486 245 489 2.64E-72 T 05-07-2017 AC028_RS02090 89cfb62e746b620f28e960812475041b 893 Pfam PF11838 ERAP1-like C-terminal domain 560 880 3.0E-39 T 05-07-2017 IPR024571 ERAP1-like C-terminal domain AC028_RS02090 89cfb62e746b620f28e960812475041b 893 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 295 305 1.7E-21 T 05-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AC028_RS02090 89cfb62e746b620f28e960812475041b 893 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 330 345 1.7E-21 T 05-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AC028_RS02090 89cfb62e746b620f28e960812475041b 893 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 210 225 1.7E-21 T 05-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AC028_RS02090 89cfb62e746b620f28e960812475041b 893 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 349 361 1.7E-21 T 05-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AC028_RS02090 89cfb62e746b620f28e960812475041b 893 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 162 177 1.7E-21 T 05-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AC028_RS02090 89cfb62e746b620f28e960812475041b 893 Gene3D G3DSA:1.10.390.10 344 491 1.0E-44 T 05-07-2017 AC028_RS02090 89cfb62e746b620f28e960812475041b 893 SUPERFAMILY SSF63737 27 227 7.19E-49 T 05-07-2017 AC028_RS02090 89cfb62e746b620f28e960812475041b 893 Pfam PF01433 Peptidase family M1 33 421 2.1E-103 T 05-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AC028_RS18640 c8ec2f983a8e3778efc349de42d5d66e 221 Pfam PF13860 FlgD Ig-like domain 103 177 5.7E-20 T 05-07-2017 IPR025965 FlgD Ig-like domain AC028_RS18640 c8ec2f983a8e3778efc349de42d5d66e 221 Pfam PF13861 FlgD Tudor-like domain 84 217 2.0E-14 T 05-07-2017 IPR025963 FlgD Tudor-like domain AC028_RS18640 c8ec2f983a8e3778efc349de42d5d66e 221 Pfam PF03963 Flagellar hook capping protein - N-terminal region 15 75 2.4E-22 T 05-07-2017 IPR005648 Flagellar hook capping protein AC028_RS03820 9d44e4bd6ae2cd54836270ceb02da882 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 05-07-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AC028_RS03820 9d44e4bd6ae2cd54836270ceb02da882 391 SUPERFAMILY SSF53901 269 390 1.25E-41 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS03820 9d44e4bd6ae2cd54836270ceb02da882 391 Gene3D G3DSA:3.40.47.10 194 274 3.1E-70 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS03820 9d44e4bd6ae2cd54836270ceb02da882 391 Gene3D G3DSA:3.40.47.10 3 123 3.1E-70 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS03820 9d44e4bd6ae2cd54836270ceb02da882 391 PIRSF PIRSF000429 1 391 1.0E-114 T 05-07-2017 IPR002155 Thiolase GO:0008152|GO:0016747 AC028_RS03820 9d44e4bd6ae2cd54836270ceb02da882 391 SUPERFAMILY SSF53901 3 267 5.28E-78 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS03820 9d44e4bd6ae2cd54836270ceb02da882 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 05-07-2017 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AC028_RS03820 9d44e4bd6ae2cd54836270ceb02da882 391 Gene3D G3DSA:3.40.47.10 275 389 3.8E-60 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS03820 9d44e4bd6ae2cd54836270ceb02da882 391 Gene3D G3DSA:3.40.47.10 142 193 3.8E-60 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS03820 9d44e4bd6ae2cd54836270ceb02da882 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 7.4E-127 T 05-07-2017 IPR002155 Thiolase GO:0008152|GO:0016747 AC028_RS03820 9d44e4bd6ae2cd54836270ceb02da882 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 2.4E-44 T 05-07-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AC028_RS03820 9d44e4bd6ae2cd54836270ceb02da882 391 Pfam PF00108 Thiolase, N-terminal domain 4 260 4.5E-87 T 05-07-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AC028_RS21985 dbe29c3794666f738736fe748e66d761 1306 Pfam PF13502 AsmA-like C-terminal region 1034 1275 6.2E-60 T 05-07-2017 IPR032712 AsmA-like, C-terminal AC028_RS21985 dbe29c3794666f738736fe748e66d761 1306 Pfam PF13116 Protein of unknown function 508 783 1.8E-42 T 05-07-2017 IPR025263 Domain of unknown function DUF3971 AC028_RS21985 dbe29c3794666f738736fe748e66d761 1306 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 10 1286 0.0 T 05-07-2017 IPR011836 Conserved hypothetical protein CHP02099 AC028_RS06560 da1ecf08e16fb1356998a3770560b826 634 SUPERFAMILY SSF55785 508 632 1.16E-9 T 05-07-2017 IPR000014 PAS domain AC028_RS06560 da1ecf08e16fb1356998a3770560b826 634 SUPERFAMILY SSF55781 338 511 2.35E-41 T 05-07-2017 IPR029016 GAF domain-like AC028_RS06560 da1ecf08e16fb1356998a3770560b826 634 Gene3D G3DSA:3.30.450.40 136 308 2.3E-9 T 05-07-2017 IPR029016 GAF domain-like AC028_RS06560 da1ecf08e16fb1356998a3770560b826 634 SMART SM00091 517 588 5.8 T 05-07-2017 IPR000014 PAS domain AC028_RS06560 da1ecf08e16fb1356998a3770560b826 634 SMART SM00091 17 84 7.7 T 05-07-2017 IPR000014 PAS domain AC028_RS06560 da1ecf08e16fb1356998a3770560b826 634 Pfam PF00360 Phytochrome region 325 510 7.8E-53 T 05-07-2017 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 AC028_RS06560 da1ecf08e16fb1356998a3770560b826 634 SUPERFAMILY SSF55781 139 310 1.29E-54 T 05-07-2017 IPR029016 GAF domain-like AC028_RS06560 da1ecf08e16fb1356998a3770560b826 634 Pfam PF08448 PAS fold 539 632 5.5E-5 T 05-07-2017 IPR013656 PAS fold-4 AC028_RS06560 da1ecf08e16fb1356998a3770560b826 634 PRINTS PR01033 Phytochrome signature 159 178 1.5E-18 T 05-07-2017 IPR001294 Phytochrome GO:0006355|GO:0009584 AC028_RS06560 da1ecf08e16fb1356998a3770560b826 634 PRINTS PR01033 Phytochrome signature 437 456 1.5E-18 T 05-07-2017 IPR001294 Phytochrome GO:0006355|GO:0009584 AC028_RS06560 da1ecf08e16fb1356998a3770560b826 634 PRINTS PR01033 Phytochrome signature 345 365 1.5E-18 T 05-07-2017 IPR001294 Phytochrome GO:0006355|GO:0009584 AC028_RS06560 da1ecf08e16fb1356998a3770560b826 634 PRINTS PR01033 Phytochrome signature 246 267 1.5E-18 T 05-07-2017 IPR001294 Phytochrome GO:0006355|GO:0009584 AC028_RS06560 da1ecf08e16fb1356998a3770560b826 634 PRINTS PR01033 Phytochrome signature 471 489 1.5E-18 T 05-07-2017 IPR001294 Phytochrome GO:0006355|GO:0009584 AC028_RS06560 da1ecf08e16fb1356998a3770560b826 634 SUPERFAMILY SSF55785 4 120 1.68E-28 T 05-07-2017 IPR000014 PAS domain AC028_RS06560 da1ecf08e16fb1356998a3770560b826 634 SMART SM00065 144 318 0.0033 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS06560 da1ecf08e16fb1356998a3770560b826 634 Pfam PF01590 GAF domain 146 296 2.9E-17 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS06560 da1ecf08e16fb1356998a3770560b826 634 Pfam PF08446 PAS fold 13 119 1.2E-13 T 05-07-2017 IPR013654 PAS fold-2 GO:0006355 AC028_RS06560 da1ecf08e16fb1356998a3770560b826 634 Gene3D G3DSA:3.30.450.20 517 627 5.2E-10 T 05-07-2017 AC028_RS20505 ad35335becf3b70688c0334d25bdfef4 1464 SMART SM00487 19 236 4.7E-31 T 05-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_RS20505 ad35335becf3b70688c0334d25bdfef4 1464 Gene3D G3DSA:3.40.50.300 257 388 6.6E-31 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS20505 ad35335becf3b70688c0334d25bdfef4 1464 Gene3D G3DSA:3.40.50.300 12 208 3.9E-44 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS20505 ad35335becf3b70688c0334d25bdfef4 1464 SUPERFAMILY SSF52540 31 212 9.5E-48 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS20505 ad35335becf3b70688c0334d25bdfef4 1464 SUPERFAMILY SSF52540 248 374 9.5E-48 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS20505 ad35335becf3b70688c0334d25bdfef4 1464 Pfam PF00270 DEAD/DEAH box helicase 24 210 3.4E-27 T 05-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AC028_RS20505 ad35335becf3b70688c0334d25bdfef4 1464 SMART SM00490 290 370 3.1E-17 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS20505 ad35335becf3b70688c0334d25bdfef4 1464 Pfam PF00271 Helicase conserved C-terminal domain 273 370 1.6E-16 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS20505 ad35335becf3b70688c0334d25bdfef4 1464 Pfam PF08494 DEAD/H associated 633 835 7.2E-52 T 05-07-2017 IPR013701 DEAD/H associated GO:0005524|GO:0016818 AC028_RS17905 cd9e152e25d4592257f2e4f7a82c2c8a 188 SMART SM00841 131 186 1.7E-24 T 05-07-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AC028_RS17905 cd9e152e25d4592257f2e4f7a82c2c8a 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.5E-20 T 05-07-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AC028_RS17905 cd9e152e25d4592257f2e4f7a82c2c8a 188 SUPERFAMILY SSF50249 68 128 3.26E-12 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS17905 cd9e152e25d4592257f2e4f7a82c2c8a 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 2 60 3.3E-13 T 05-07-2017 IPR013185 Translation elongation factor, KOW-like AC028_RS17905 cd9e152e25d4592257f2e4f7a82c2c8a 188 Gene3D G3DSA:2.30.30.30 2 63 3.2E-10 T 05-07-2017 IPR014722 Ribosomal protein L2 domain 2 AC028_RS17905 cd9e152e25d4592257f2e4f7a82c2c8a 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 1 187 41.043 T 05-07-2017 IPR011897 Translation elongation factor P-like, YeiP AC028_RS17905 cd9e152e25d4592257f2e4f7a82c2c8a 188 Gene3D G3DSA:2.40.50.140 66 129 3.3E-15 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS17905 cd9e152e25d4592257f2e4f7a82c2c8a 188 PIRSF PIRSF005901 1 188 1.4E-61 T 05-07-2017 IPR020599 Translation elongation factor P/YeiP AC028_RS17905 cd9e152e25d4592257f2e4f7a82c2c8a 188 SMART SM01185 68 123 2.6E-15 T 05-07-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AC028_RS17905 cd9e152e25d4592257f2e4f7a82c2c8a 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 2 187 3.1E-85 T 05-07-2017 IPR011897 Translation elongation factor P-like, YeiP AC028_RS17905 cd9e152e25d4592257f2e4f7a82c2c8a 188 Gene3D G3DSA:2.40.50.140 130 187 1.6E-22 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS17905 cd9e152e25d4592257f2e4f7a82c2c8a 188 SUPERFAMILY SSF50104 2 63 1.26E-9 T 05-07-2017 IPR008991 Translation protein SH3-like domain AC028_RS17905 cd9e152e25d4592257f2e4f7a82c2c8a 188 SUPERFAMILY SSF50249 130 187 2.06E-15 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS17905 cd9e152e25d4592257f2e4f7a82c2c8a 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 05-07-2017 IPR013852 Translation elongation factor P/YeiP, conserved site AC028_RS17905 cd9e152e25d4592257f2e4f7a82c2c8a 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 123 2.5E-13 T 05-07-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AC028_RS17360 2ccb72c272eca5034f1eed90de10329e 558 Pfam PF03109 ABC1 family 118 236 1.6E-32 T 05-07-2017 IPR004147 UbiB domain AC028_RS17360 2ccb72c272eca5034f1eed90de10329e 558 Gene3D G3DSA:3.90.1200.10 271 359 5.4E-9 T 05-07-2017 AC028_RS17360 2ccb72c272eca5034f1eed90de10329e 558 SUPERFAMILY SSF56112 205 436 4.67E-29 T 05-07-2017 IPR011009 Protein kinase-like domain AC028_RS17360 2ccb72c272eca5034f1eed90de10329e 558 SUPERFAMILY SSF56112 100 163 4.67E-29 T 05-07-2017 IPR011009 Protein kinase-like domain AC028_RS17360 2ccb72c272eca5034f1eed90de10329e 558 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 12 446 1.8E-166 T 05-07-2017 IPR010232 Probable protein kinase UbiB GO:0006744 AC028_RS10685 ec5d5a42a8da274e0ce52b78f8f2f1f7 315 SUPERFAMILY SSF55811 6 131 1.27E-34 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS10685 ec5d5a42a8da274e0ce52b78f8f2f1f7 315 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 05-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AC028_RS10685 ec5d5a42a8da274e0ce52b78f8f2f1f7 315 Gene3D G3DSA:3.90.79.10 7 130 3.5E-34 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS10685 ec5d5a42a8da274e0ce52b78f8f2f1f7 315 Pfam PF00293 NUDIX domain 11 123 1.7E-18 T 05-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AC028_RS10685 ec5d5a42a8da274e0ce52b78f8f2f1f7 315 PRINTS PR00502 NUDIX hydrolase family signature 37 51 2.5E-8 T 05-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AC028_RS10685 ec5d5a42a8da274e0ce52b78f8f2f1f7 315 PRINTS PR00502 NUDIX hydrolase family signature 51 66 2.5E-8 T 05-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AC028_RS10685 ec5d5a42a8da274e0ce52b78f8f2f1f7 315 SUPERFAMILY SSF51391 118 313 5.1E-47 T 05-07-2017 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AC028_RS10685 ec5d5a42a8da274e0ce52b78f8f2f1f7 315 Pfam PF02581 Thiamine monophosphate synthase/TENI 136 312 9.1E-39 T 05-07-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AC028_RS10685 ec5d5a42a8da274e0ce52b78f8f2f1f7 315 Gene3D G3DSA:3.20.20.70 131 313 3.4E-41 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS10685 ec5d5a42a8da274e0ce52b78f8f2f1f7 315 TIGRFAM TIGR00586 mutt: mutator mutT protein 7 132 5.4E-33 T 05-07-2017 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AC028_RS20635 50e7b7a8ff44843b80575cce117b73e7 502 Pfam PF02321 Outer membrane efflux protein 74 282 4.3E-26 T 05-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AC028_RS20635 50e7b7a8ff44843b80575cce117b73e7 502 Pfam PF02321 Outer membrane efflux protein 315 491 3.4E-25 T 05-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AC028_RS20635 50e7b7a8ff44843b80575cce117b73e7 502 SUPERFAMILY SSF56954 7 36 2.49E-95 T 05-07-2017 AC028_RS20635 50e7b7a8ff44843b80575cce117b73e7 502 SUPERFAMILY SSF56954 65 496 2.49E-95 T 05-07-2017 AC028_RS20635 50e7b7a8ff44843b80575cce117b73e7 502 Gene3D G3DSA:1.20.1600.10 61 496 1.7E-94 T 05-07-2017 AC028_RS20635 50e7b7a8ff44843b80575cce117b73e7 502 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 493 1.9E-84 T 05-07-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AC028_RS15655 59952383f0aafabab2eb4c32b5aa8dd0 626 SUPERFAMILY SSF52540 371 621 1.96E-74 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS15655 59952383f0aafabab2eb4c32b5aa8dd0 626 ProSitePatterns PS00211 ABC transporters family signature. 523 537 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS15655 59952383f0aafabab2eb4c32b5aa8dd0 626 Gene3D G3DSA:1.20.1560.10 36 346 4.3E-18 T 05-07-2017 AC028_RS15655 59952383f0aafabab2eb4c32b5aa8dd0 626 Gene3D G3DSA:3.40.50.300 382 615 4.4E-72 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS15655 59952383f0aafabab2eb4c32b5aa8dd0 626 Pfam PF00005 ABC transporter 398 551 5.4E-35 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS15655 59952383f0aafabab2eb4c32b5aa8dd0 626 SUPERFAMILY SSF90123 31 343 4.32E-27 T 05-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AC028_RS15655 59952383f0aafabab2eb4c32b5aa8dd0 626 SMART SM00382 406 597 1.8E-19 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS07015 8bfa7dedf1975febb76be9dc68383d3c 442 Pfam PF00308 Bacterial dnaA protein 106 324 1.2E-84 T 05-07-2017 IPR013317 Chromosomal replication initiator protein DnaA AC028_RS07015 8bfa7dedf1975febb76be9dc68383d3c 442 SUPERFAMILY SSF52540 107 318 1.44E-38 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07015 8bfa7dedf1975febb76be9dc68383d3c 442 Pfam PF11638 DnaA N-terminal domain 1 62 7.9E-15 T 05-07-2017 IPR024633 DnaA N-terminal domain AC028_RS07015 8bfa7dedf1975febb76be9dc68383d3c 442 SMART SM00760 350 419 1.6E-39 T 05-07-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AC028_RS07015 8bfa7dedf1975febb76be9dc68383d3c 442 SUPERFAMILY SSF48295 339 441 1.62E-35 T 05-07-2017 IPR010921 Trp repressor/replication initiator GO:0043565 AC028_RS07015 8bfa7dedf1975febb76be9dc68383d3c 442 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 441 32.027 T 05-07-2017 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AC028_RS07015 8bfa7dedf1975febb76be9dc68383d3c 442 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 4 440 1.3E-165 T 05-07-2017 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AC028_RS07015 8bfa7dedf1975febb76be9dc68383d3c 442 Gene3D G3DSA:3.40.50.300 101 271 3.4E-54 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07015 8bfa7dedf1975febb76be9dc68383d3c 442 Gene3D G3DSA:1.10.1750.10 341 441 6.2E-40 T 05-07-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AC028_RS07015 8bfa7dedf1975febb76be9dc68383d3c 442 ProSitePatterns PS01008 DnaA protein signature. 400 419 - T 05-07-2017 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AC028_RS07015 8bfa7dedf1975febb76be9dc68383d3c 442 SMART SM00382 139 270 1.4E-4 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS07015 8bfa7dedf1975febb76be9dc68383d3c 442 Gene3D G3DSA:1.10.8.60 273 340 2.6E-27 T 05-07-2017 AC028_RS07015 8bfa7dedf1975febb76be9dc68383d3c 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 172 186 4.0E-46 T 05-07-2017 IPR020591 Chromosomal replication control, initiator DnaA-like AC028_RS07015 8bfa7dedf1975febb76be9dc68383d3c 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 204 218 4.0E-46 T 05-07-2017 IPR020591 Chromosomal replication control, initiator DnaA-like AC028_RS07015 8bfa7dedf1975febb76be9dc68383d3c 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 140 160 4.0E-46 T 05-07-2017 IPR020591 Chromosomal replication control, initiator DnaA-like AC028_RS07015 8bfa7dedf1975febb76be9dc68383d3c 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 400 419 4.0E-46 T 05-07-2017 IPR020591 Chromosomal replication control, initiator DnaA-like AC028_RS07015 8bfa7dedf1975febb76be9dc68383d3c 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 238 265 4.0E-46 T 05-07-2017 IPR020591 Chromosomal replication control, initiator DnaA-like AC028_RS07015 8bfa7dedf1975febb76be9dc68383d3c 442 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 353 419 7.1E-30 T 05-07-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AC028_RS07540 39df69b35a7d50b5eb8937cd5fe1ef9b 539 Gene3D G3DSA:2.115.10.20 54 335 9.8E-70 T 05-07-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AC028_RS07540 39df69b35a7d50b5eb8937cd5fe1ef9b 539 Gene3D G3DSA:2.60.120.200 358 528 1.9E-10 T 05-07-2017 IPR013320 Concanavalin A-like lectin/glucanase domain AC028_RS07540 39df69b35a7d50b5eb8937cd5fe1ef9b 539 Pfam PF04616 Glycosyl hydrolases family 43 56 327 4.4E-88 T 05-07-2017 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AC028_RS07540 39df69b35a7d50b5eb8937cd5fe1ef9b 539 SUPERFAMILY SSF75005 55 334 4.84E-74 T 05-07-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AC028_RS07540 39df69b35a7d50b5eb8937cd5fe1ef9b 539 SUPERFAMILY SSF49899 355 536 7.52E-18 T 05-07-2017 IPR013320 Concanavalin A-like lectin/glucanase domain AC028_RS00240 e1f66fd30e293cfa199334a3f1b5ced3 190 SUPERFAMILY SSF48150 4 167 4.19E-53 T 05-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AC028_RS00240 e1f66fd30e293cfa199334a3f1b5ced3 190 Gene3D G3DSA:1.10.340.30 4 165 2.1E-48 T 05-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AC028_RS00240 e1f66fd30e293cfa199334a3f1b5ced3 190 Pfam PF03352 Methyladenine glycosylase 11 119 7.6E-41 T 05-07-2017 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AC028_RS15085 11ff722bb22b1df6a6552f1e7019fef3 456 Pfam PF00571 CBS domain 341 388 7.8E-7 T 05-07-2017 IPR000644 CBS domain AC028_RS15085 11ff722bb22b1df6a6552f1e7019fef3 456 Gene3D G3DSA:3.40.50.1100 42 146 4.9E-37 T 05-07-2017 AC028_RS15085 11ff722bb22b1df6a6552f1e7019fef3 456 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 302 5.7E-63 T 05-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AC028_RS15085 11ff722bb22b1df6a6552f1e7019fef3 456 Gene3D G3DSA:3.40.50.1100 152 317 2.1E-57 T 05-07-2017 AC028_RS15085 11ff722bb22b1df6a6552f1e7019fef3 456 Gene3D G3DSA:3.40.50.1100 2 41 2.1E-57 T 05-07-2017 AC028_RS15085 11ff722bb22b1df6a6552f1e7019fef3 456 Gene3D G3DSA:3.10.580.10 341 453 9.6E-18 T 05-07-2017 AC028_RS15085 11ff722bb22b1df6a6552f1e7019fef3 456 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 05-07-2017 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AC028_RS15085 11ff722bb22b1df6a6552f1e7019fef3 456 SUPERFAMILY SSF53686 2 321 1.96E-90 T 05-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AC028_RS15085 11ff722bb22b1df6a6552f1e7019fef3 456 SUPERFAMILY SSF54631 335 452 2.65E-17 T 05-07-2017 AC028_RS15085 11ff722bb22b1df6a6552f1e7019fef3 456 SMART SM00116 343 390 5.1E-7 T 05-07-2017 IPR000644 CBS domain AC028_RS15175 fce3a766d936c58574c3352a7beb419c 433 Gene3D G3DSA:3.30.465.10 62 173 1.2E-20 T 05-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AC028_RS15175 fce3a766d936c58574c3352a7beb419c 433 Pfam PF01565 FAD binding domain 35 142 1.3E-18 T 05-07-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AC028_RS15175 fce3a766d936c58574c3352a7beb419c 433 SUPERFAMILY SSF56176 31 174 4.02E-33 T 05-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AC028_RS00475 ff5931880de610527998f423bf862824 333 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 54 323 2.9E-110 T 05-07-2017 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AC028_RS00475 ff5931880de610527998f423bf862824 333 Gene3D G3DSA:3.10.580.10 205 330 5.1E-42 T 05-07-2017 AC028_RS00475 ff5931880de610527998f423bf862824 333 PIRSF PIRSF004692 5 333 4.1E-133 T 05-07-2017 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AC028_RS00475 ff5931880de610527998f423bf862824 333 Gene3D G3DSA:3.40.50.10490 21 204 3.1E-48 T 05-07-2017 AC028_RS00475 ff5931880de610527998f423bf862824 333 SUPERFAMILY SSF53697 22 331 2.67E-69 T 05-07-2017 AC028_RS00475 ff5931880de610527998f423bf862824 333 Pfam PF00571 CBS domain 212 267 7.5E-10 T 05-07-2017 IPR000644 CBS domain AC028_RS00475 ff5931880de610527998f423bf862824 333 Pfam PF00571 CBS domain 278 330 1.1E-7 T 05-07-2017 IPR000644 CBS domain AC028_RS00475 ff5931880de610527998f423bf862824 333 Pfam PF01380 SIS domain 50 181 9.7E-32 T 05-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 AC028_RS00475 ff5931880de610527998f423bf862824 333 SMART SM00116 284 332 0.0058 T 05-07-2017 IPR000644 CBS domain AC028_RS00475 ff5931880de610527998f423bf862824 333 SMART SM00116 219 267 2.1E-5 T 05-07-2017 IPR000644 CBS domain AC028_RS21310 bf8de4dc44135e4b8e9da2423a409f00 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.372 T 05-07-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS21310 bf8de4dc44135e4b8e9da2423a409f00 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.5E-39 T 05-07-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS21310 bf8de4dc44135e4b8e9da2423a409f00 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.5E-39 T 05-07-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS21310 bf8de4dc44135e4b8e9da2423a409f00 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.5E-39 T 05-07-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS21310 bf8de4dc44135e4b8e9da2423a409f00 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 1.0E-21 T 05-07-2017 AC028_RS21310 bf8de4dc44135e4b8e9da2423a409f00 119 Pfam PF00453 Ribosomal protein L20 3 109 3.3E-47 T 05-07-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS21310 bf8de4dc44135e4b8e9da2423a409f00 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.9E-48 T 05-07-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS21310 bf8de4dc44135e4b8e9da2423a409f00 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 05-07-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS21310 bf8de4dc44135e4b8e9da2423a409f00 119 SUPERFAMILY SSF74731 3 117 1.99E-48 T 05-07-2017 AC028_RS21310 bf8de4dc44135e4b8e9da2423a409f00 119 Gene3D G3DSA:1.10.1900.20 55 117 2.2E-30 T 05-07-2017 AC028_RS04475 866c187c35dfc8a80f62685ebeca4a8f 844 Pfam PF03929 PepSY-associated TM region 7 359 7.2E-57 T 05-07-2017 IPR005625 PepSY-associated TM protein AC028_RS04475 866c187c35dfc8a80f62685ebeca4a8f 844 Gene3D G3DSA:3.40.50.80 708 844 3.9E-36 T 05-07-2017 AC028_RS04475 866c187c35dfc8a80f62685ebeca4a8f 844 SUPERFAMILY SSF52343 707 844 5.76E-34 T 05-07-2017 AC028_RS04475 866c187c35dfc8a80f62685ebeca4a8f 844 Pfam PF00258 Flavodoxin 387 510 1.4E-23 T 05-07-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AC028_RS04475 866c187c35dfc8a80f62685ebeca4a8f 844 SUPERFAMILY SSF52218 383 528 1.03E-36 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS04475 866c187c35dfc8a80f62685ebeca4a8f 844 Pfam PF00175 Oxidoreductase NAD-binding domain 713 817 5.1E-9 T 05-07-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AC028_RS04475 866c187c35dfc8a80f62685ebeca4a8f 844 Gene3D G3DSA:3.40.50.360 378 525 2.9E-37 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS04475 866c187c35dfc8a80f62685ebeca4a8f 844 SUPERFAMILY SSF63380 532 704 1.52E-18 T 05-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AC028_RS04475 866c187c35dfc8a80f62685ebeca4a8f 844 PRINTS PR00369 Flavodoxin signature 434 445 4.7E-8 T 05-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AC028_RS04475 866c187c35dfc8a80f62685ebeca4a8f 844 PRINTS PR00369 Flavodoxin signature 489 508 4.7E-8 T 05-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AC028_RS04475 866c187c35dfc8a80f62685ebeca4a8f 844 PRINTS PR00369 Flavodoxin signature 386 399 4.7E-8 T 05-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AC028_RS04475 866c187c35dfc8a80f62685ebeca4a8f 844 PRINTS PR00369 Flavodoxin signature 465 475 4.7E-8 T 05-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AC028_RS04475 866c187c35dfc8a80f62685ebeca4a8f 844 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 803 811 2.4E-7 T 05-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AC028_RS04475 866c187c35dfc8a80f62685ebeca4a8f 844 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 780 796 2.4E-7 T 05-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AC028_RS04475 866c187c35dfc8a80f62685ebeca4a8f 844 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 712 731 2.4E-7 T 05-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AC028_RS04475 866c187c35dfc8a80f62685ebeca4a8f 844 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 749 760 2.4E-7 T 05-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AC028_RS04475 866c187c35dfc8a80f62685ebeca4a8f 844 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 649 656 2.4E-7 T 05-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AC028_RS04475 866c187c35dfc8a80f62685ebeca4a8f 844 Gene3D G3DSA:2.40.30.10 646 695 3.3E-6 T 05-07-2017 AC028_RS15265 71329ea2d14cbc0f5004089be8b2110f 278 SMART SM00382 46 236 8.3E-15 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS15265 71329ea2d14cbc0f5004089be8b2110f 278 Pfam PF00005 ABC transporter 39 188 6.6E-31 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS15265 71329ea2d14cbc0f5004089be8b2110f 278 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS15265 71329ea2d14cbc0f5004089be8b2110f 278 SUPERFAMILY SSF52540 22 248 4.39E-59 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS15265 71329ea2d14cbc0f5004089be8b2110f 278 Gene3D G3DSA:3.40.50.300 13 248 3.9E-63 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02865 270937297c31171a30b40b5af85c968a 85 SUPERFAMILY SSF55021 1 75 2.44E-6 T 05-07-2017 AC028_RS02865 270937297c31171a30b40b5af85c968a 85 Pfam PF13710 ACT domain 12 73 1.7E-18 T 05-07-2017 AC028_RS02865 270937297c31171a30b40b5af85c968a 85 Gene3D G3DSA:3.30.70.260 1 74 3.1E-8 T 05-07-2017 AC028_RS00070 187201df4c3a348415a8d4938d5712e4 690 Pfam PF02554 Carbon starvation protein CstA 31 408 2.2E-165 T 05-07-2017 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AC028_RS00070 187201df4c3a348415a8d4938d5712e4 690 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 3.3E-36 T 05-07-2017 IPR025299 CstA, C-terminal domain AC028_RS21250 fd316aa72f61f9ab63e1f7cda8faa53f 380 Pfam PF13439 Glycosyltransferase Family 4 14 179 3.2E-18 T 05-07-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AC028_RS21250 fd316aa72f61f9ab63e1f7cda8faa53f 380 Gene3D G3DSA:3.40.50.2000 188 333 3.8E-19 T 05-07-2017 AC028_RS21250 fd316aa72f61f9ab63e1f7cda8faa53f 380 SUPERFAMILY SSF53756 2 370 8.37E-60 T 05-07-2017 AC028_RS21250 fd316aa72f61f9ab63e1f7cda8faa53f 380 Pfam PF00534 Glycosyl transferases group 1 189 335 7.0E-25 T 05-07-2017 IPR001296 Glycosyl transferase, family 1 AC028_RS20825 9358517c1700844178741b97e014a585 318 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 6 314 1.3E-88 T 05-07-2017 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 AC028_RS20825 9358517c1700844178741b97e014a585 318 PIRSF PIRSF000535 2 317 4.8E-104 T 05-07-2017 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AC028_RS20825 9358517c1700844178741b97e014a585 318 Gene3D G3DSA:3.40.1190.20 36 316 1.9E-71 T 05-07-2017 IPR029056 Ribokinase-like AC028_RS20825 9358517c1700844178741b97e014a585 318 SUPERFAMILY SSF53613 6 298 3.9E-59 T 05-07-2017 IPR029056 Ribokinase-like AC028_RS20825 9358517c1700844178741b97e014a585 318 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 05-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AC028_RS20825 9358517c1700844178741b97e014a585 318 Pfam PF00294 pfkB family carbohydrate kinase 10 299 1.0E-56 T 05-07-2017 IPR011611 Carbohydrate kinase PfkB AC028_RS20825 9358517c1700844178741b97e014a585 318 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 254 267 - T 05-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AC028_RS20825 9358517c1700844178741b97e014a585 318 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 6 314 3.2E-90 T 05-07-2017 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AC028_RS20640 b6d40e3c9fea6bf464cf55f384342f6f 528 Gene3D G3DSA:1.20.1250.20 24 207 3.2E-27 T 05-07-2017 AC028_RS20640 b6d40e3c9fea6bf464cf55f384342f6f 528 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 28 513 4.3E-116 T 05-07-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AC028_RS20640 b6d40e3c9fea6bf464cf55f384342f6f 528 PRINTS PR01036 Tetracycline resistance protein TetB signature 151 175 9.5E-5 T 05-07-2017 AC028_RS20640 b6d40e3c9fea6bf464cf55f384342f6f 528 PRINTS PR01036 Tetracycline resistance protein TetB signature 30 54 9.5E-5 T 05-07-2017 AC028_RS20640 b6d40e3c9fea6bf464cf55f384342f6f 528 PRINTS PR01036 Tetracycline resistance protein TetB signature 121 141 9.5E-5 T 05-07-2017 AC028_RS20640 b6d40e3c9fea6bf464cf55f384342f6f 528 Gene3D G3DSA:1.20.1250.20 280 437 3.5E-18 T 05-07-2017 AC028_RS20640 b6d40e3c9fea6bf464cf55f384342f6f 528 Gene3D G3DSA:1.20.1250.20 494 523 3.5E-18 T 05-07-2017 AC028_RS20640 b6d40e3c9fea6bf464cf55f384342f6f 528 SUPERFAMILY SSF103473 19 205 8.11E-65 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS20640 b6d40e3c9fea6bf464cf55f384342f6f 528 SUPERFAMILY SSF103473 493 524 8.11E-65 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS20640 b6d40e3c9fea6bf464cf55f384342f6f 528 SUPERFAMILY SSF103473 264 435 8.11E-65 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS20640 b6d40e3c9fea6bf464cf55f384342f6f 528 Pfam PF07690 Major Facilitator Superfamily 33 425 6.0E-50 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS14670 8a717b5a051d5ca9e34209128c52b814 226 Gene3D G3DSA:3.40.50.1000 96 221 4.8E-42 T 05-07-2017 IPR023214 HAD-like domain AC028_RS14670 8a717b5a051d5ca9e34209128c52b814 226 Gene3D G3DSA:3.40.50.1000 9 25 4.8E-42 T 05-07-2017 IPR023214 HAD-like domain AC028_RS14670 8a717b5a051d5ca9e34209128c52b814 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 190 3.0E-27 T 05-07-2017 IPR023214 HAD-like domain AC028_RS14670 8a717b5a051d5ca9e34209128c52b814 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 4.7E-5 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS14670 8a717b5a051d5ca9e34209128c52b814 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 4.7E-5 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS14670 8a717b5a051d5ca9e34209128c52b814 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 4.7E-5 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS14670 8a717b5a051d5ca9e34209128c52b814 226 SUPERFAMILY SSF56784 10 221 1.21E-48 T 05-07-2017 IPR023214 HAD-like domain AC028_RS14670 8a717b5a051d5ca9e34209128c52b814 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 70 190 1.6E-16 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS19010 ffc84feef4e560308d8e3352c4c02cf2 786 SUPERFAMILY SSF53098 325 473 5.99E-51 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS19010 ffc84feef4e560308d8e3352c4c02cf2 786 SUPERFAMILY SSF50249 641 730 1.27E-24 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS19010 ffc84feef4e560308d8e3352c4c02cf2 786 SUPERFAMILY SSF158832 6 324 1.18E-112 T 05-07-2017 AC028_RS19010 ffc84feef4e560308d8e3352c4c02cf2 786 Pfam PF09371 Tex-like protein N-terminal domain 14 197 1.6E-65 T 05-07-2017 IPR018974 Tex-like protein, N-terminal AC028_RS19010 ffc84feef4e560308d8e3352c4c02cf2 786 Gene3D G3DSA:1.10.10.650 4 114 1.5E-44 T 05-07-2017 IPR023319 Tex-like protein, HTH domain AC028_RS19010 ffc84feef4e560308d8e3352c4c02cf2 786 Pfam PF00575 S1 RNA binding domain 653 724 1.3E-20 T 05-07-2017 IPR003029 S1 domain GO:0003676 AC028_RS19010 ffc84feef4e560308d8e3352c4c02cf2 786 Gene3D G3DSA:1.10.150.310 503 634 3.0E-44 T 05-07-2017 IPR023097 Tex RuvX-like domain AC028_RS19010 ffc84feef4e560308d8e3352c4c02cf2 786 Pfam PF12836 Helix-hairpin-helix motif 495 559 1.8E-27 T 05-07-2017 AC028_RS19010 ffc84feef4e560308d8e3352c4c02cf2 786 SUPERFAMILY SSF47781 564 636 6.0E-19 T 05-07-2017 IPR010994 RuvA domain 2-like AC028_RS19010 ffc84feef4e560308d8e3352c4c02cf2 786 Gene3D G3DSA:3.30.420.140 329 454 4.3E-53 T 05-07-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 AC028_RS19010 ffc84feef4e560308d8e3352c4c02cf2 786 SUPERFAMILY SSF47781 474 561 1.67E-26 T 05-07-2017 IPR010994 RuvA domain 2-like AC028_RS19010 ffc84feef4e560308d8e3352c4c02cf2 786 Gene3D G3DSA:2.40.50.140 637 724 4.1E-28 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS19010 ffc84feef4e560308d8e3352c4c02cf2 786 Pfam PF16921 Tex protein YqgF-like domain 329 455 4.5E-54 T 05-07-2017 IPR032639 Tex protein, YqgF-like domain AC028_RS19010 ffc84feef4e560308d8e3352c4c02cf2 786 SMART SM00316 653 724 3.7E-25 T 05-07-2017 IPR022967 RNA-binding domain, S1 AC028_RS19010 ffc84feef4e560308d8e3352c4c02cf2 786 SMART SM00732 329 428 4.2E-35 T 05-07-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 AC028_RS19010 ffc84feef4e560308d8e3352c4c02cf2 786 Gene3D G3DSA:1.10.3500.10 455 500 8.3E-92 T 05-07-2017 IPR023323 Tex-like domain AC028_RS19010 ffc84feef4e560308d8e3352c4c02cf2 786 Gene3D G3DSA:1.10.3500.10 115 325 8.3E-92 T 05-07-2017 IPR023323 Tex-like domain AC028_RS05295 4f2e174991dd5ad08a91dfbc321bc08f 672 SUPERFAMILY SSF56024 514 590 2.79E-23 T 05-07-2017 AC028_RS05295 4f2e174991dd5ad08a91dfbc321bc08f 672 SUPERFAMILY SSF56024 313 419 2.79E-23 T 05-07-2017 AC028_RS05295 4f2e174991dd5ad08a91dfbc321bc08f 672 Gene3D G3DSA:3.30.870.10 522 593 2.1E-33 T 05-07-2017 AC028_RS05295 4f2e174991dd5ad08a91dfbc321bc08f 672 Gene3D G3DSA:3.30.870.10 329 424 2.1E-33 T 05-07-2017 AC028_RS05295 4f2e174991dd5ad08a91dfbc321bc08f 672 Gene3D G3DSA:3.30.870.10 67 259 1.4E-39 T 05-07-2017 AC028_RS05295 4f2e174991dd5ad08a91dfbc321bc08f 672 Pfam PF13091 PLD-like domain 91 245 1.2E-19 T 05-07-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 AC028_RS05295 4f2e174991dd5ad08a91dfbc321bc08f 672 Pfam PF13091 PLD-like domain 520 571 2.3E-9 T 05-07-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 AC028_RS05295 4f2e174991dd5ad08a91dfbc321bc08f 672 SMART SM00155 517 544 0.018 T 05-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AC028_RS05295 4f2e174991dd5ad08a91dfbc321bc08f 672 SMART SM00155 186 213 0.0037 T 05-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AC028_RS05295 4f2e174991dd5ad08a91dfbc321bc08f 672 SUPERFAMILY SSF56024 63 257 3.66E-38 T 05-07-2017 AC028_RS12450 0182cf5d970ed514f877d4c21026bba9 430 Gene3D G3DSA:1.10.300.10 104 196 2.2E-34 T 05-07-2017 AC028_RS12450 0182cf5d970ed514f877d4c21026bba9 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 05-07-2017 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AC028_RS12450 0182cf5d970ed514f877d4c21026bba9 430 Gene3D G3DSA:3.90.170.10 267 425 7.3E-67 T 05-07-2017 AC028_RS12450 0182cf5d970ed514f877d4c21026bba9 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 209.088 T 05-07-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AC028_RS12450 0182cf5d970ed514f877d4c21026bba9 430 Gene3D G3DSA:3.40.440.10 3 94 2.0E-69 T 05-07-2017 AC028_RS12450 0182cf5d970ed514f877d4c21026bba9 430 Gene3D G3DSA:3.40.440.10 197 266 2.0E-69 T 05-07-2017 AC028_RS12450 0182cf5d970ed514f877d4c21026bba9 430 SMART SM00788 4 424 6.0E-289 T 05-07-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AC028_RS12450 0182cf5d970ed514f877d4c21026bba9 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 429 1.3E-176 T 05-07-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AC028_RS12450 0182cf5d970ed514f877d4c21026bba9 430 SUPERFAMILY SSF52540 4 429 4.36E-175 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12450 0182cf5d970ed514f877d4c21026bba9 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 05-07-2017 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AC028_RS12450 0182cf5d970ed514f877d4c21026bba9 430 Pfam PF00709 Adenylosuccinate synthetase 5 422 1.7E-173 T 05-07-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AC028_RS09880 d5327400939070a61ba276821756eead 284 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 11 282 4.9E-78 T 05-07-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AC028_RS09880 d5327400939070a61ba276821756eead 284 Gene3D G3DSA:3.10.310.10 7 127 4.8E-46 T 05-07-2017 AC028_RS09880 d5327400939070a61ba276821756eead 284 SUPERFAMILY SSF54506 149 283 4.87E-47 T 05-07-2017 AC028_RS09880 d5327400939070a61ba276821756eead 284 Gene3D G3DSA:3.10.310.10 128 272 1.3E-49 T 05-07-2017 AC028_RS09880 d5327400939070a61ba276821756eead 284 SUPERFAMILY SSF54506 10 139 5.49E-40 T 05-07-2017 AC028_RS09880 d5327400939070a61ba276821756eead 284 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 10 284 35.852 T 05-07-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AC028_RS09880 d5327400939070a61ba276821756eead 284 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 73 87 - T 05-07-2017 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AC028_RS09880 d5327400939070a61ba276821756eead 284 Pfam PF01678 Diaminopimelate epimerase 162 277 2.3E-26 T 05-07-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AC028_RS09880 d5327400939070a61ba276821756eead 284 Pfam PF01678 Diaminopimelate epimerase 12 132 6.2E-24 T 05-07-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AC028_RS06370 f58fe942296a079a6929a8edadf4a26f 243 Gene3D G3DSA:3.40.50.2020 73 242 5.5E-31 T 05-07-2017 IPR029057 Phosphoribosyltransferase-like AC028_RS06370 f58fe942296a079a6929a8edadf4a26f 243 SUPERFAMILY SSF53271 64 242 9.83E-33 T 05-07-2017 IPR029057 Phosphoribosyltransferase-like AC028_RS06370 f58fe942296a079a6929a8edadf4a26f 243 Pfam PF00156 Phosphoribosyl transferase domain 155 238 4.9E-7 T 05-07-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 AC028_RS11420 0fca0f2ac365d6a450e884e0e7de0b9a 552 Gene3D G3DSA:3.40.50.200 89 439 1.3E-83 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS11420 0fca0f2ac365d6a450e884e0e7de0b9a 552 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 474 538 1.4E-12 T 05-07-2017 IPR007280 Peptidase, C-terminal, archaeal/bacterial AC028_RS11420 0fca0f2ac365d6a450e884e0e7de0b9a 552 SUPERFAMILY SSF52743 95 439 2.23E-70 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS11420 0fca0f2ac365d6a450e884e0e7de0b9a 552 PRINTS PR00723 Subtilisin serine protease family (S8) signature 205 218 5.8E-11 T 05-07-2017 IPR015500 Peptidase S8, subtilisin-related AC028_RS11420 0fca0f2ac365d6a450e884e0e7de0b9a 552 PRINTS PR00723 Subtilisin serine protease family (S8) signature 377 393 5.8E-11 T 05-07-2017 IPR015500 Peptidase S8, subtilisin-related AC028_RS11420 0fca0f2ac365d6a450e884e0e7de0b9a 552 PRINTS PR00723 Subtilisin serine protease family (S8) signature 144 163 5.8E-11 T 05-07-2017 IPR015500 Peptidase S8, subtilisin-related AC028_RS11420 0fca0f2ac365d6a450e884e0e7de0b9a 552 Gene3D G3DSA:2.60.120.380 453 544 1.4E-6 T 05-07-2017 AC028_RS11420 0fca0f2ac365d6a450e884e0e7de0b9a 552 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 209 219 - T 05-07-2017 IPR022398 Peptidase S8, subtilisin, His-active site AC028_RS11420 0fca0f2ac365d6a450e884e0e7de0b9a 552 SUPERFAMILY SSF89260 453 541 3.53E-5 T 05-07-2017 AC028_RS11420 0fca0f2ac365d6a450e884e0e7de0b9a 552 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 149 159 - T 05-07-2017 IPR023827 Peptidase S8, subtilisin, Asp-active site AC028_RS11420 0fca0f2ac365d6a450e884e0e7de0b9a 552 Pfam PF00082 Subtilase family 144 428 9.4E-50 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS16805 699ff91b2deeef27f52263ffce02f798 1167 SUPERFAMILY SSF75553 485 668 6.41E-10 T 05-07-2017 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 AC028_RS16805 699ff91b2deeef27f52263ffce02f798 1167 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1157 0.0 T 05-07-2017 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AC028_RS16805 699ff91b2deeef27f52263ffce02f798 1167 SUPERFAMILY SSF52540 1 213 6.83E-51 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS16805 699ff91b2deeef27f52263ffce02f798 1167 SUPERFAMILY SSF52540 1043 1159 6.83E-51 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS16805 699ff91b2deeef27f52263ffce02f798 1167 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1150 3.9E-67 T 05-07-2017 IPR003395 RecF/RecN/SMC, N-terminal AC028_RS16805 699ff91b2deeef27f52263ffce02f798 1167 SUPERFAMILY SSF57997 658 855 3.4E-5 T 05-07-2017 AC028_RS16805 699ff91b2deeef27f52263ffce02f798 1167 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1159 23.291 T 05-07-2017 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AC028_RS16805 699ff91b2deeef27f52263ffce02f798 1167 Gene3D G3DSA:3.40.50.300 1024 1161 1.3E-71 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS16805 699ff91b2deeef27f52263ffce02f798 1167 Gene3D G3DSA:3.40.50.300 1 166 1.3E-71 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS16805 699ff91b2deeef27f52263ffce02f798 1167 PIRSF PIRSF005719 1 1165 3.5E-265 T 05-07-2017 IPR024704 Structural maintenance of chromosomes protein AC028_RS16805 699ff91b2deeef27f52263ffce02f798 1167 SMART SM00968 521 619 3.6E-5 T 05-07-2017 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 AC028_RS16805 699ff91b2deeef27f52263ffce02f798 1167 Gene3D G3DSA:1.20.1170.10 659 838 2.3E-4 T 05-07-2017 AC028_RS11160 2f005c5a1c74b4e0b5f083c03f104209 333 SUPERFAMILY SSF53850 103 308 2.44E-29 T 05-07-2017 AC028_RS11160 2f005c5a1c74b4e0b5f083c03f104209 333 Gene3D G3DSA:3.40.190.10 195 267 7.8E-8 T 05-07-2017 AC028_RS11160 2f005c5a1c74b4e0b5f083c03f104209 333 Pfam PF03466 LysR substrate binding domain 103 306 7.5E-30 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS11160 2f005c5a1c74b4e0b5f083c03f104209 333 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 5.7E-16 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS11160 2f005c5a1c74b4e0b5f083c03f104209 333 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 1.5E-6 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS11160 2f005c5a1c74b4e0b5f083c03f104209 333 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 1.5E-6 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS11160 2f005c5a1c74b4e0b5f083c03f104209 333 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 1.5E-6 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS11160 2f005c5a1c74b4e0b5f083c03f104209 333 SUPERFAMILY SSF46785 10 121 5.01E-18 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS11160 2f005c5a1c74b4e0b5f083c03f104209 333 Gene3D G3DSA:1.10.10.10 12 94 6.7E-21 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS11160 2f005c5a1c74b4e0b5f083c03f104209 333 Gene3D G3DSA:3.40.190.10 103 194 6.2E-18 T 05-07-2017 AC028_RS13860 78541ccffd72c66c7e80968947c8e481 113 SUPERFAMILY SSF52833 3 109 3.03E-40 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS13860 78541ccffd72c66c7e80968947c8e481 113 TIGRFAM TIGR01068 thioredoxin: thioredoxin 10 107 7.4E-38 T 05-07-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AC028_RS13860 78541ccffd72c66c7e80968947c8e481 113 PIRSF PIRSF000077 2 108 6.0E-42 T 05-07-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AC028_RS13860 78541ccffd72c66c7e80968947c8e481 113 Pfam PF00085 Thioredoxin 5 106 3.5E-32 T 05-07-2017 IPR013766 Thioredoxin domain GO:0045454 AC028_RS13860 78541ccffd72c66c7e80968947c8e481 113 Gene3D G3DSA:3.40.30.10 2 109 6.7E-38 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS13860 78541ccffd72c66c7e80968947c8e481 113 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 05-07-2017 IPR017937 Thioredoxin, conserved site GO:0045454 AC028_RS13860 78541ccffd72c66c7e80968947c8e481 113 PRINTS PR00421 Thioredoxin family signature 24 32 4.1E-8 T 05-07-2017 AC028_RS13860 78541ccffd72c66c7e80968947c8e481 113 PRINTS PR00421 Thioredoxin family signature 32 41 4.1E-8 T 05-07-2017 AC028_RS13860 78541ccffd72c66c7e80968947c8e481 113 PRINTS PR00421 Thioredoxin family signature 72 83 4.1E-8 T 05-07-2017 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 SMART SM00028 356 389 11.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 SMART SM00028 794 827 3.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 SMART SM00028 66 99 310.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 SMART SM00028 314 347 310.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 SMART SM00028 32 65 19.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 SMART SM00028 760 793 15.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 SMART SM00028 390 422 300.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 SMART SM00028 726 759 0.25 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 PRINTS PR01441 Cellulose synthase subunit C signature 744 772 2.4E-13 T 05-07-2017 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 PRINTS PR01441 Cellulose synthase subunit C signature 154 166 2.4E-13 T 05-07-2017 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 PRINTS PR01441 Cellulose synthase subunit C signature 184 201 2.4E-13 T 05-07-2017 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 PRINTS PR01441 Cellulose synthase subunit C signature 498 518 2.4E-13 T 05-07-2017 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 SUPERFAMILY SSF48452 468 558 7.15E-9 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 Pfam PF14559 Tetratricopeptide repeat 44 106 6.9E-8 T 05-07-2017 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 Pfam PF14559 Tetratricopeptide repeat 703 759 1.7E-5 T 05-07-2017 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 Pfam PF14559 Tetratricopeptide repeat 475 537 1.2E-8 T 05-07-2017 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 Pfam PF14559 Tetratricopeptide repeat 401 456 1.3E-7 T 05-07-2017 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 SUPERFAMILY SSF48452 700 825 8.6E-18 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 SUPERFAMILY SSF48452 35 185 3.57E-11 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 SUPERFAMILY SSF48452 230 337 3.57E-11 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 Gene3D G3DSA:1.25.40.10 37 212 2.4E-12 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 1005 1488 1.2E-102 T 05-07-2017 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 SUPERFAMILY SSF48452 370 447 2.66E-14 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 SUPERFAMILY SSF48452 287 337 2.66E-14 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 Pfam PF13432 Tetratricopeptide repeat 765 824 0.0013 T 05-07-2017 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 Pfam PF13432 Tetratricopeptide repeat 290 338 0.0017 T 05-07-2017 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 Gene3D G3DSA:1.25.40.10 283 557 2.6E-28 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS03070 969571763f6fc4a6cb28048b5165d9df 1509 Gene3D G3DSA:1.25.40.10 581 833 2.2E-22 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 Gene3D G3DSA:1.25.40.20 389 560 6.5E-35 T 05-07-2017 IPR020683 Ankyrin repeat-containing domain AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 Pfam PF12796 Ankyrin repeats (3 copies) 319 399 4.6E-11 T 05-07-2017 IPR020683 Ankyrin repeat-containing domain AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 Pfam PF12796 Ankyrin repeats (3 copies) 826 912 8.7E-9 T 05-07-2017 IPR020683 Ankyrin repeat-containing domain AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 Pfam PF12796 Ankyrin repeats (3 copies) 693 783 5.7E-7 T 05-07-2017 IPR020683 Ankyrin repeat-containing domain AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 Gene3D G3DSA:1.25.40.20 620 806 8.9E-32 T 05-07-2017 IPR020683 Ankyrin repeat-containing domain AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 Gene3D G3DSA:1.25.40.20 826 1089 2.6E-48 T 05-07-2017 IPR020683 Ankyrin repeat-containing domain AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 SUPERFAMILY SSF48403 240 560 3.03E-46 T 05-07-2017 IPR020683 Ankyrin repeat-containing domain AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 Pfam PF13637 Ankyrin repeats (many copies) 423 460 6.5E-5 T 05-07-2017 AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 SUPERFAMILY SSF48403 619 806 1.71E-29 T 05-07-2017 IPR020683 Ankyrin repeat-containing domain AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 SMART SM00248 304 336 7.6 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 SMART SM00248 753 782 0.026 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 SMART SM00248 851 880 0.15 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 SMART SM00248 786 847 4100.0 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 SMART SM00248 950 987 22.0 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 SMART SM00248 884 913 3.8 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 SMART SM00248 720 749 1000.0 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 SMART SM00248 681 716 390.0 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 SMART SM00248 235 264 980.0 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 SMART SM00248 404 435 870.0 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 SMART SM00248 373 402 4.9 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 SMART SM00248 1035 1064 0.33 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 SMART SM00248 917 946 1.0 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 SMART SM00248 505 539 58.0 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 SMART SM00248 472 501 310.0 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 SMART SM00248 439 468 8.4E-4 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 SMART SM00248 340 369 0.0098 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 SUPERFAMILY SSF48403 1029 1087 2.4E-44 T 05-07-2017 IPR020683 Ankyrin repeat-containing domain AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 SUPERFAMILY SSF48403 825 984 2.4E-44 T 05-07-2017 IPR020683 Ankyrin repeat-containing domain AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 Pfam PF00023 Ankyrin repeat 918 949 0.0011 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 Pfam PF00023 Ankyrin repeat 1036 1066 0.025 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04710 bfd6d5a15f4691fed4229238a2116d7f 1106 Gene3D G3DSA:1.25.40.20 240 388 3.0E-27 T 05-07-2017 IPR020683 Ankyrin repeat-containing domain AC028_RS17695 6c02e6fd44c8d60b978201ba1ea3696a 234 SUPERFAMILY SSF53681 6 120 8.5E-36 T 05-07-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS17695 6c02e6fd44c8d60b978201ba1ea3696a 234 SUPERFAMILY SSF53681 108 218 4.25E-32 T 05-07-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS17695 6c02e6fd44c8d60b978201ba1ea3696a 234 Gene3D G3DSA:3.40.50.1860 117 219 4.7E-35 T 05-07-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS17695 6c02e6fd44c8d60b978201ba1ea3696a 234 TIGRFAM TIGR00035 asp_race: aspartate racemase 6 227 3.5E-65 T 05-07-2017 IPR004380 Aspartate racemase GO:0006520|GO:0016855 AC028_RS17695 6c02e6fd44c8d60b978201ba1ea3696a 234 Gene3D G3DSA:3.40.50.1860 6 116 2.8E-43 T 05-07-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS17695 6c02e6fd44c8d60b978201ba1ea3696a 234 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 227 4.6E-60 T 05-07-2017 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS17695 6c02e6fd44c8d60b978201ba1ea3696a 234 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 196 206 - T 05-07-2017 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS10120 a9d3859b10b6fddbd5d7b16861eef44e 313 Gene3D G3DSA:1.10.1040.10 171 289 3.7E-34 T 05-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AC028_RS10120 a9d3859b10b6fddbd5d7b16861eef44e 313 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 169 280 4.8E-22 T 05-07-2017 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AC028_RS10120 a9d3859b10b6fddbd5d7b16861eef44e 313 SUPERFAMILY SSF48179 167 298 5.51E-41 T 05-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AC028_RS10120 a9d3859b10b6fddbd5d7b16861eef44e 313 Gene3D G3DSA:3.40.50.720 1 170 2.1E-48 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS10120 a9d3859b10b6fddbd5d7b16861eef44e 313 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 05-07-2017 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AC028_RS10120 a9d3859b10b6fddbd5d7b16861eef44e 313 SUPERFAMILY SSF51735 1 155 3.44E-46 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS10120 a9d3859b10b6fddbd5d7b16861eef44e 313 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 153 1.8E-42 T 05-07-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AC028_RS10120 a9d3859b10b6fddbd5d7b16861eef44e 313 SMART SM01350 169 313 2.0E-6 T 05-07-2017 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AC028_RS10120 a9d3859b10b6fddbd5d7b16861eef44e 313 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 299 3.4E-117 T 05-07-2017 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 AC028_RS10120 a9d3859b10b6fddbd5d7b16861eef44e 313 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 234 261 5.3E-38 T 05-07-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AC028_RS10120 a9d3859b10b6fddbd5d7b16861eef44e 313 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 24 5.3E-38 T 05-07-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AC028_RS10120 a9d3859b10b6fddbd5d7b16861eef44e 313 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 59 88 5.3E-38 T 05-07-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AC028_RS10120 a9d3859b10b6fddbd5d7b16861eef44e 313 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 158 186 5.3E-38 T 05-07-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AC028_RS10120 a9d3859b10b6fddbd5d7b16861eef44e 313 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 112 137 5.3E-38 T 05-07-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 AC028_RS19480 54211987a264e2abec2c6f80ca20a324 222 SUPERFAMILY SSF53448 2 195 2.56E-34 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS19480 54211987a264e2abec2c6f80ca20a324 222 Gene3D G3DSA:3.90.550.10 2 199 2.8E-20 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS19480 54211987a264e2abec2c6f80ca20a324 222 Pfam PF00535 Glycosyl transferase family 2 4 121 6.7E-13 T 05-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 Gene3D G3DSA:1.10.3850.10 280 498 2.9E-56 T 05-07-2017 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 Gene3D G3DSA:1.10.3850.10 815 1029 2.5E-55 T 05-07-2017 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 SUPERFAMILY SSF82693 38 132 3.79E-27 T 05-07-2017 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 Gene3D G3DSA:3.30.2090.10 715 811 4.5E-19 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 Gene3D G3DSA:3.30.2090.10 181 275 7.5E-27 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 SUPERFAMILY SSF82693 809 858 2.22E-25 T 05-07-2017 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 SUPERFAMILY SSF82693 665 715 2.22E-25 T 05-07-2017 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 SUPERFAMILY SSF82693 135 182 3.66E-21 T 05-07-2017 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 SUPERFAMILY SSF82693 274 330 3.66E-21 T 05-07-2017 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 SUPERFAMILY SSF82693 563 664 2.62E-28 T 05-07-2017 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 Pfam PF00873 AcrB/AcrD/AcrF family 1 1028 0.0 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 Gene3D G3DSA:3.30.70.1430 565 664 1.4E-31 T 05-07-2017 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 SUPERFAMILY SSF82866 833 1028 6.28E-45 T 05-07-2017 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 SUPERFAMILY SSF82714 182 271 1.96E-21 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 SUPERFAMILY SSF82714 716 809 6.15E-15 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 SUPERFAMILY SSF82866 296 497 8.89E-46 T 05-07-2017 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 PRINTS PR00702 Acriflavin resistance protein family signature 617 631 2.6E-99 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.6E-99 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.6E-99 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.6E-99 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 2.6E-99 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.6E-99 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.6E-99 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.6E-99 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.6E-99 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 Gene3D G3DSA:3.30.70.1430 38 139 9.3E-33 T 05-07-2017 AC028_RS20810 c2daa02affdc77865d0e503685da59e7 1056 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1040 0.0 T 05-07-2017 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AC028_RS11745 147401c8823158612e31d07ee53431b0 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 2.6E-30 T 05-07-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11745 147401c8823158612e31d07ee53431b0 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 5.2E-51 T 05-07-2017 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11745 147401c8823158612e31d07ee53431b0 118 Gene3D G3DSA:4.10.910.10 76 118 3.5E-24 T 05-07-2017 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11745 147401c8823158612e31d07ee53431b0 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.631 T 05-07-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11745 147401c8823158612e31d07ee53431b0 118 Gene3D G3DSA:1.10.8.50 1 71 1.9E-27 T 05-07-2017 AC028_RS11745 147401c8823158612e31d07ee53431b0 118 SUPERFAMILY SSF46946 2 114 2.94E-43 T 05-07-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AC028_RS11745 147401c8823158612e31d07ee53431b0 118 PIRSF PIRSF002134 1 118 1.1E-41 T 05-07-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11745 147401c8823158612e31d07ee53431b0 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 05-07-2017 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS18580 3e4c80b3f8969323f37c850d8502bb9b 137 Pfam PF02561 Flagellar protein FliS 10 126 1.0E-34 T 05-07-2017 IPR003713 Flagellar protein FliS GO:0044780 AC028_RS18580 3e4c80b3f8969323f37c850d8502bb9b 137 SUPERFAMILY SSF101116 11 127 2.62E-34 T 05-07-2017 IPR003713 Flagellar protein FliS GO:0044780 AC028_RS18580 3e4c80b3f8969323f37c850d8502bb9b 137 TIGRFAM TIGR00208 fliS: flagellar protein FliS 12 126 1.1E-25 T 05-07-2017 IPR003713 Flagellar protein FliS GO:0044780 AC028_RS18580 3e4c80b3f8969323f37c850d8502bb9b 137 Gene3D G3DSA:1.20.120.340 10 131 2.7E-40 T 05-07-2017 IPR003713 Flagellar protein FliS GO:0044780 AC028_RS18580 3e4c80b3f8969323f37c850d8502bb9b 137 PIRSF PIRSF039090 3 137 2.2E-47 T 05-07-2017 IPR003713 Flagellar protein FliS GO:0044780 AC028_RS08240 9f871b9992c4fb6aadf1615e2fdfcfc8 396 Gene3D G3DSA:1.20.1250.20 10 196 1.6E-23 T 05-07-2017 AC028_RS08240 9f871b9992c4fb6aadf1615e2fdfcfc8 396 Pfam PF07690 Major Facilitator Superfamily 22 321 2.5E-27 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS08240 9f871b9992c4fb6aadf1615e2fdfcfc8 396 SUPERFAMILY SSF103473 8 390 3.27E-48 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS08240 9f871b9992c4fb6aadf1615e2fdfcfc8 396 Gene3D G3DSA:1.20.1250.20 222 390 1.6E-11 T 05-07-2017 AC028_RS01575 d02cfd2163587f8c71a019dd604f9c78 252 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 16 196 3.1E-26 T 05-07-2017 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AC028_RS01575 d02cfd2163587f8c71a019dd604f9c78 252 SUPERFAMILY SSF51621 5 240 1.71E-60 T 05-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AC028_RS01575 d02cfd2163587f8c71a019dd604f9c78 252 Gene3D G3DSA:3.20.20.60 4 240 2.6E-57 T 05-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AC028_RS10910 2c122c37d656e67320bc8eeec985fdd3 277 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS10910 2c122c37d656e67320bc8eeec985fdd3 277 SMART SM00382 34 215 6.7E-16 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS10910 2c122c37d656e67320bc8eeec985fdd3 277 SUPERFAMILY SSF52540 5 241 4.6E-66 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10910 2c122c37d656e67320bc8eeec985fdd3 277 Gene3D G3DSA:3.40.50.300 2 224 3.7E-63 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10910 2c122c37d656e67320bc8eeec985fdd3 277 Pfam PF00005 ABC transporter 26 167 5.2E-32 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS07675 0f19c0938f8cf298cd0e4a23a105b5d7 1064 Pfam PF00873 AcrB/AcrD/AcrF family 5 1051 0.0 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS07675 0f19c0938f8cf298cd0e4a23a105b5d7 1064 SUPERFAMILY SSF82693 277 333 2.62E-18 T 05-07-2017 AC028_RS07675 0f19c0938f8cf298cd0e4a23a105b5d7 1064 SUPERFAMILY SSF82693 156 191 2.62E-18 T 05-07-2017 AC028_RS07675 0f19c0938f8cf298cd0e4a23a105b5d7 1064 Gene3D G3DSA:3.30.70.1430 42 143 4.8E-29 T 05-07-2017 AC028_RS07675 0f19c0938f8cf298cd0e4a23a105b5d7 1064 SUPERFAMILY SSF82714 192 274 4.71E-16 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS07675 0f19c0938f8cf298cd0e4a23a105b5d7 1064 SUPERFAMILY SSF82866 300 506 7.32E-32 T 05-07-2017 AC028_RS07675 0f19c0938f8cf298cd0e4a23a105b5d7 1064 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1060 0.0 T 05-07-2017 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AC028_RS07675 0f19c0938f8cf298cd0e4a23a105b5d7 1064 SUPERFAMILY SSF82693 42 128 9.07E-23 T 05-07-2017 AC028_RS07675 0f19c0938f8cf298cd0e4a23a105b5d7 1064 Gene3D G3DSA:1.10.3850.10 836 1053 1.3E-57 T 05-07-2017 AC028_RS07675 0f19c0938f8cf298cd0e4a23a105b5d7 1064 Gene3D G3DSA:1.10.3850.10 283 508 1.6E-46 T 05-07-2017 AC028_RS07675 0f19c0938f8cf298cd0e4a23a105b5d7 1064 Gene3D G3DSA:3.30.2090.10 192 274 1.4E-16 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS07675 0f19c0938f8cf298cd0e4a23a105b5d7 1064 Gene3D G3DSA:3.30.2090.10 725 829 7.3E-15 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS07675 0f19c0938f8cf298cd0e4a23a105b5d7 1064 SUPERFAMILY SSF82714 725 796 3.53E-12 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS07675 0f19c0938f8cf298cd0e4a23a105b5d7 1064 SUPERFAMILY SSF82866 828 1054 4.58E-55 T 05-07-2017 AC028_RS07675 0f19c0938f8cf298cd0e4a23a105b5d7 1064 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.3E-22 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS07675 0f19c0938f8cf298cd0e4a23a105b5d7 1064 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.3E-22 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS07675 0f19c0938f8cf298cd0e4a23a105b5d7 1064 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 1.3E-22 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS07675 0f19c0938f8cf298cd0e4a23a105b5d7 1064 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.3E-22 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS07675 0f19c0938f8cf298cd0e4a23a105b5d7 1064 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.3E-22 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS07675 0f19c0938f8cf298cd0e4a23a105b5d7 1064 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.3E-22 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS17350 20cd0a1d600d5a1554419b912fe2dd29 439 Gene3D G3DSA:3.40.50.300 198 365 8.5E-36 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS17350 20cd0a1d600d5a1554419b912fe2dd29 439 Pfam PF13167 GTP-binding GTPase N-terminal 26 112 1.8E-30 T 05-07-2017 IPR025121 GTPase HflX, N-terminal AC028_RS17350 20cd0a1d600d5a1554419b912fe2dd29 439 SUPERFAMILY SSF52540 199 365 3.32E-43 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS17350 20cd0a1d600d5a1554419b912fe2dd29 439 Pfam PF01926 50S ribosome-binding GTPase 200 318 1.7E-21 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS17350 20cd0a1d600d5a1554419b912fe2dd29 439 Pfam PF16360 GTP-binding GTPase Middle Region 114 193 1.1E-26 T 05-07-2017 IPR032305 GTP-binding protein, middle domain AC028_RS17350 20cd0a1d600d5a1554419b912fe2dd29 439 Hamap MF_00900 GTPase HflX [hflX]. 27 394 46.79 T 05-07-2017 IPR016496 GTPase HflX GO:0005525 AC028_RS17350 20cd0a1d600d5a1554419b912fe2dd29 439 PIRSF PIRSF006809 3 424 1.4E-142 T 05-07-2017 IPR016496 GTPase HflX GO:0005525 AC028_RS17350 20cd0a1d600d5a1554419b912fe2dd29 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 2.7E-12 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS17350 20cd0a1d600d5a1554419b912fe2dd29 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 222 240 2.7E-12 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS17350 20cd0a1d600d5a1554419b912fe2dd29 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 2.7E-12 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS17350 20cd0a1d600d5a1554419b912fe2dd29 439 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 199 358 1.3E-12 T 05-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AC028_RS17350 20cd0a1d600d5a1554419b912fe2dd29 439 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 364 1.6E-145 T 05-07-2017 IPR016496 GTPase HflX GO:0005525 AC028_RS13270 775cfaa34fd1a87be1efac7fee9cee72 135 Pfam PF01479 S4 domain 11 56 2.8E-8 T 05-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AC028_RS13270 775cfaa34fd1a87be1efac7fee9cee72 135 SUPERFAMILY SSF55174 9 106 6.28E-25 T 05-07-2017 AC028_RS13270 775cfaa34fd1a87be1efac7fee9cee72 135 PIRSF PIRSF016821 8 134 2.0E-34 T 05-07-2017 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 AC028_RS13270 775cfaa34fd1a87be1efac7fee9cee72 135 Gene3D G3DSA:3.10.290.10 7 105 7.3E-31 T 05-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AC028_RS13270 775cfaa34fd1a87be1efac7fee9cee72 135 SMART SM00363 11 73 0.0013 T 05-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AC028_RS04720 080d068a9678050fba84eef5eb5808a2 399 Gene3D G3DSA:3.40.47.10 254 398 4.0E-50 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS04720 080d068a9678050fba84eef5eb5808a2 399 SUPERFAMILY SSF53901 1 242 1.37E-32 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS04720 080d068a9678050fba84eef5eb5808a2 399 SUPERFAMILY SSF53901 212 398 1.65E-48 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS04720 080d068a9678050fba84eef5eb5808a2 399 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 250 356 1.3E-28 T 05-07-2017 IPR014031 Beta-ketoacyl synthase, C-terminal AC028_RS04720 080d068a9678050fba84eef5eb5808a2 399 Gene3D G3DSA:3.40.47.10 2 241 2.5E-27 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS04720 080d068a9678050fba84eef5eb5808a2 399 SMART SM00825 Beta-ketoacyl synthase 4 399 3.1E-8 T 05-07-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AC028_RS04720 080d068a9678050fba84eef5eb5808a2 399 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 73 238 1.8E-20 T 05-07-2017 IPR014030 Beta-ketoacyl synthase, N-terminal AC028_RS04720 080d068a9678050fba84eef5eb5808a2 399 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 05-07-2017 IPR018201 Beta-ketoacyl synthase, active site AC028_RS00590 6ececf60c87f271380532caa90e258d6 313 SUPERFAMILY SSF53474 6 292 2.01E-59 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS00590 6ececf60c87f271380532caa90e258d6 313 PIRSF PIRSF005539 1 300 1.6E-152 T 05-07-2017 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AC028_RS00590 6ececf60c87f271380532caa90e258d6 313 Pfam PF00561 alpha/beta hydrolase fold 29 279 2.0E-25 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS00590 6ececf60c87f271380532caa90e258d6 313 TIGRFAM TIGR01250 pro_imino_pep_2: proline-specific peptidase 3 291 3.1E-81 T 05-07-2017 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AC028_RS00590 6ececf60c87f271380532caa90e258d6 313 Gene3D G3DSA:3.40.50.1820 2 293 5.6E-56 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS00590 6ececf60c87f271380532caa90e258d6 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 57 68 4.7E-12 T 05-07-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AC028_RS00590 6ececf60c87f271380532caa90e258d6 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 102 116 4.7E-12 T 05-07-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AC028_RS00590 6ececf60c87f271380532caa90e258d6 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 30 38 4.7E-12 T 05-07-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AC028_RS18680 63c2d1bdcb7f3b4a86b1d039610e5ceb 573 Gene3D G3DSA:3.40.50.2300 445 569 3.6E-27 T 05-07-2017 AC028_RS18680 63c2d1bdcb7f3b4a86b1d039610e5ceb 573 Gene3D G3DSA:3.20.20.450 183 429 1.3E-84 T 05-07-2017 IPR001633 EAL domain AC028_RS18680 63c2d1bdcb7f3b4a86b1d039610e5ceb 573 SMART SM00448 446 558 6.5E-23 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS18680 63c2d1bdcb7f3b4a86b1d039610e5ceb 573 Pfam PF00072 Response regulator receiver domain 449 559 1.0E-18 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS18680 63c2d1bdcb7f3b4a86b1d039610e5ceb 573 SUPERFAMILY SSF55073 27 169 2.43E-24 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS18680 63c2d1bdcb7f3b4a86b1d039610e5ceb 573 Gene3D G3DSA:3.30.70.270 25 172 8.4E-27 T 05-07-2017 AC028_RS18680 63c2d1bdcb7f3b4a86b1d039610e5ceb 573 SMART SM00052 178 424 2.7E-97 T 05-07-2017 IPR001633 EAL domain AC028_RS18680 63c2d1bdcb7f3b4a86b1d039610e5ceb 573 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 29 167 1.1E-15 T 05-07-2017 IPR000160 GGDEF domain AC028_RS18680 63c2d1bdcb7f3b4a86b1d039610e5ceb 573 SMART SM00267 11 168 1.6E-7 T 05-07-2017 IPR000160 GGDEF domain AC028_RS18680 63c2d1bdcb7f3b4a86b1d039610e5ceb 573 SUPERFAMILY SSF141868 185 432 6.28E-81 T 05-07-2017 IPR001633 EAL domain AC028_RS18680 63c2d1bdcb7f3b4a86b1d039610e5ceb 573 Pfam PF00990 Diguanylate cyclase, GGDEF domain 27 163 4.6E-19 T 05-07-2017 IPR000160 GGDEF domain AC028_RS18680 63c2d1bdcb7f3b4a86b1d039610e5ceb 573 Pfam PF00563 EAL domain 184 419 6.3E-71 T 05-07-2017 IPR001633 EAL domain AC028_RS18680 63c2d1bdcb7f3b4a86b1d039610e5ceb 573 SUPERFAMILY SSF52172 445 567 2.56E-28 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS05245 c949a79b71ee18fd2c39ee9d3cc6506d 427 Pfam PF12867 DinB superfamily 22 152 6.7E-8 T 05-07-2017 IPR024775 DinB-like domain AC028_RS05245 c949a79b71ee18fd2c39ee9d3cc6506d 427 Gene3D G3DSA:3.90.1580.10 191 426 8.5E-52 T 05-07-2017 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AC028_RS05245 c949a79b71ee18fd2c39ee9d3cc6506d 427 Pfam PF03781 Sulfatase-modifying factor enzyme 1 344 424 9.7E-7 T 05-07-2017 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AC028_RS05245 c949a79b71ee18fd2c39ee9d3cc6506d 427 Pfam PF03781 Sulfatase-modifying factor enzyme 1 205 339 2.1E-21 T 05-07-2017 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AC028_RS05245 c949a79b71ee18fd2c39ee9d3cc6506d 427 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 18 423 4.1E-165 T 05-07-2017 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 AC028_RS05245 c949a79b71ee18fd2c39ee9d3cc6506d 427 SUPERFAMILY SSF56436 185 426 7.35E-61 T 05-07-2017 IPR016187 C-type lectin fold AC028_RS15820 1b72af485f5d278318667dd1885b63d1 425 PIRSF PIRSF001589 1 413 1.1E-71 T 05-07-2017 AC028_RS15820 1b72af485f5d278318667dd1885b63d1 425 Gene3D G3DSA:3.40.50.620 246 394 1.8E-74 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS15820 1b72af485f5d278318667dd1885b63d1 425 Gene3D G3DSA:3.40.50.620 18 187 1.8E-74 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS15820 1b72af485f5d278318667dd1885b63d1 425 Pfam PF00733 Asparagine synthase 25 395 2.6E-86 T 05-07-2017 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AC028_RS15820 1b72af485f5d278318667dd1885b63d1 425 SUPERFAMILY SSF52402 250 390 2.86E-73 T 05-07-2017 AC028_RS15820 1b72af485f5d278318667dd1885b63d1 425 SUPERFAMILY SSF52402 18 163 2.86E-73 T 05-07-2017 AC028_RS05325 03b0c0e98d94b4bea4d70dd13c63a36d 203 Pfam PF01161 Phosphatidylethanolamine-binding protein 27 196 2.5E-38 T 05-07-2017 IPR008914 Phosphatidylethanolamine-binding protein AC028_RS05325 03b0c0e98d94b4bea4d70dd13c63a36d 203 SUPERFAMILY SSF49777 1 198 2.62E-42 T 05-07-2017 IPR008914 Phosphatidylethanolamine-binding protein AC028_RS05325 03b0c0e98d94b4bea4d70dd13c63a36d 203 Gene3D G3DSA:3.90.280.10 1 202 7.4E-63 T 05-07-2017 IPR008914 Phosphatidylethanolamine-binding protein AC028_RS05325 03b0c0e98d94b4bea4d70dd13c63a36d 203 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 28 195 2.7E-25 T 05-07-2017 IPR005247 YbhB/YbcL AC028_RS12010 59b25f2feac508ca79121cc1da9a74a8 548 Gene3D G3DSA:1.25.40.10 363 509 3.5E-10 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS12010 59b25f2feac508ca79121cc1da9a74a8 548 Gene3D G3DSA:3.30.2010.10 61 142 3.6E-19 T 05-07-2017 AC028_RS12010 59b25f2feac508ca79121cc1da9a74a8 548 SUPERFAMILY SSF48452 364 495 8.86E-7 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS12010 59b25f2feac508ca79121cc1da9a74a8 548 Pfam PF01435 Peptidase family M48 66 260 1.7E-38 T 05-07-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AC028_RS12010 59b25f2feac508ca79121cc1da9a74a8 548 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 1 538 37.527 T 05-07-2017 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 AC028_RS06230 34155dc1c82c1979a2105cc603dfcdf1 327 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 239 311 8.6E-11 T 05-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AC028_RS06230 34155dc1c82c1979a2105cc603dfcdf1 327 SUPERFAMILY SSF54292 213 314 4.46E-22 T 05-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AC028_RS06230 34155dc1c82c1979a2105cc603dfcdf1 327 SUPERFAMILY SSF63380 4 102 3.76E-19 T 05-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AC028_RS06230 34155dc1c82c1979a2105cc603dfcdf1 327 PRINTS PR00409 Phthalate dioxygenase reductase family signature 30 40 1.8E-20 T 05-07-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 AC028_RS06230 34155dc1c82c1979a2105cc603dfcdf1 327 PRINTS PR00409 Phthalate dioxygenase reductase family signature 114 133 1.8E-20 T 05-07-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 AC028_RS06230 34155dc1c82c1979a2105cc603dfcdf1 327 PRINTS PR00409 Phthalate dioxygenase reductase family signature 92 106 1.8E-20 T 05-07-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 AC028_RS06230 34155dc1c82c1979a2105cc603dfcdf1 327 PRINTS PR00409 Phthalate dioxygenase reductase family signature 139 148 1.8E-20 T 05-07-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 AC028_RS06230 34155dc1c82c1979a2105cc603dfcdf1 327 PRINTS PR00409 Phthalate dioxygenase reductase family signature 190 198 1.8E-20 T 05-07-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 AC028_RS06230 34155dc1c82c1979a2105cc603dfcdf1 327 Pfam PF00970 Oxidoreductase FAD-binding domain 11 104 7.7E-8 T 05-07-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AC028_RS06230 34155dc1c82c1979a2105cc603dfcdf1 327 SUPERFAMILY SSF52343 107 226 5.11E-29 T 05-07-2017 AC028_RS06230 34155dc1c82c1979a2105cc603dfcdf1 327 Pfam PF00175 Oxidoreductase NAD-binding domain 115 204 8.3E-8 T 05-07-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AC028_RS06230 34155dc1c82c1979a2105cc603dfcdf1 327 Gene3D G3DSA:3.10.20.30 218 314 1.3E-21 T 05-07-2017 IPR012675 Beta-grasp domain AC028_RS06230 34155dc1c82c1979a2105cc603dfcdf1 327 Gene3D G3DSA:2.40.30.10 3 103 3.9E-22 T 05-07-2017 AC028_RS06230 34155dc1c82c1979a2105cc603dfcdf1 327 Gene3D G3DSA:3.40.50.80 105 217 2.0E-26 T 05-07-2017 AC028_RS06230 34155dc1c82c1979a2105cc603dfcdf1 327 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 267 275 - T 05-07-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AC028_RS02710 de0d7e9b9d9847c3d1469a2462dcda39 167 SUPERFAMILY SSF55298 29 167 2.98E-23 T 05-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AC028_RS02710 de0d7e9b9d9847c3d1469a2462dcda39 167 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 141 160 - T 05-07-2017 IPR019897 RidA, conserved site AC028_RS02710 de0d7e9b9d9847c3d1469a2462dcda39 167 Gene3D G3DSA:3.30.1330.40 31 167 8.1E-29 T 05-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AC028_RS02710 de0d7e9b9d9847c3d1469a2462dcda39 167 Pfam PF01042 Endoribonuclease L-PSP 50 165 4.0E-16 T 05-07-2017 IPR006175 YjgF/YER057c/UK114 family AC028_RS18865 2f1cbd454a2ca9fde6964bf27aefab07 176 SUPERFAMILY SSF55961 17 156 8.25E-13 T 05-07-2017 AC028_RS18865 2f1cbd454a2ca9fde6964bf27aefab07 176 Gene3D G3DSA:3.30.530.20 18 155 1.5E-12 T 05-07-2017 IPR023393 START-like domain AC028_RS14340 3157fb95cc98ab55b1226dc6da48d794 589 Pfam PF00005 ABC transporter 359 508 1.1E-33 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS14340 3157fb95cc98ab55b1226dc6da48d794 589 SMART SM00382 368 554 2.1E-19 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS14340 3157fb95cc98ab55b1226dc6da48d794 589 Gene3D G3DSA:3.40.50.300 343 567 3.4E-81 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS14340 3157fb95cc98ab55b1226dc6da48d794 589 SUPERFAMILY SSF52540 335 578 1.17E-89 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS14340 3157fb95cc98ab55b1226dc6da48d794 589 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS14340 3157fb95cc98ab55b1226dc6da48d794 589 Pfam PF00664 ABC transporter transmembrane region 31 291 2.4E-18 T 05-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AC028_RS14340 3157fb95cc98ab55b1226dc6da48d794 589 SUPERFAMILY SSF90123 14 323 1.31E-47 T 05-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AC028_RS14340 3157fb95cc98ab55b1226dc6da48d794 589 Gene3D G3DSA:1.20.1560.10 15 323 1.1E-39 T 05-07-2017 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.2E-66 T 05-07-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.2E-66 T 05-07-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.2E-66 T 05-07-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.2E-66 T 05-07-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.2E-66 T 05-07-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.2E-66 T 05-07-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.2E-66 T 05-07-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 Gene3D G3DSA:3.30.470.20 201 399 1.5E-75 T 05-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 Gene3D G3DSA:3.30.470.20 746 940 8.1E-78 T 05-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 428 548 8.4E-39 T 05-07-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 SUPERFAMILY SSF52440 1 127 1.73E-49 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 SUPERFAMILY SSF52440 557 676 1.37E-49 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 Gene3D G3DSA:3.40.50.20 540 663 7.0E-60 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1068 13.301 T 05-07-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 05-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 Gene3D G3DSA:3.40.50.20 4 108 6.0E-44 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 845 852 - T 05-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 SUPERFAMILY SSF56059 674 939 9.72E-103 T 05-07-2017 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 Gene3D G3DSA:1.10.1030.10 400 539 6.8E-50 T 05-07-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 Gene3D G3DSA:3.30.1490.20 142 200 1.5E-23 T 05-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 Gene3D G3DSA:3.30.1490.20 687 745 9.6E-26 T 05-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 05-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 SMART SM01096 425 548 5.2E-70 T 05-07-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 SUPERFAMILY SSF52335 942 1077 8.63E-40 T 05-07-2017 IPR011607 Methylglyoxal synthase-like domain AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1059 0.0 T 05-07-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 SUPERFAMILY SSF56059 128 401 1.13E-107 T 05-07-2017 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 Pfam PF02142 MGS-like domain 963 1048 1.9E-19 T 05-07-2017 IPR011607 Methylglyoxal synthase-like domain AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 Gene3D G3DSA:3.40.50.1380 945 1078 4.4E-42 T 05-07-2017 IPR011607 Methylglyoxal synthase-like domain AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 SUPERFAMILY SSF48108 396 555 1.57E-50 T 05-07-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 882 3.2E-38 T 05-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 4.8E-70 T 05-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 SMART SM00851 962 1048 1.0E-32 T 05-07-2017 IPR011607 Methylglyoxal synthase-like domain AC028_RS17975 3e4c97cca3339d6c9706576e7c01a76e 1080 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1074 13.511 T 05-07-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 AC028_RS04400 812eb1de62906ba79faaa73ce0d4d0bb 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 2.8E-11 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS04400 812eb1de62906ba79faaa73ce0d4d0bb 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 2.8E-11 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS04400 812eb1de62906ba79faaa73ce0d4d0bb 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 448 2.8E-11 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS04400 812eb1de62906ba79faaa73ce0d4d0bb 471 Gene3D G3DSA:3.30.565.10 321 468 9.7E-26 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS04400 812eb1de62906ba79faaa73ce0d4d0bb 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 469 1.6E-13 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS04400 812eb1de62906ba79faaa73ce0d4d0bb 471 Gene3D G3DSA:1.10.287.130 249 304 1.2E-5 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS04400 812eb1de62906ba79faaa73ce0d4d0bb 471 SMART SM00387 358 471 7.0E-26 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS04400 812eb1de62906ba79faaa73ce0d4d0bb 471 SMART SM00388 256 313 0.0079 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS04400 812eb1de62906ba79faaa73ce0d4d0bb 471 SUPERFAMILY SSF47384 239 304 1.47E-5 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS04400 812eb1de62906ba79faaa73ce0d4d0bb 471 SUPERFAMILY SSF55874 306 468 1.96E-24 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS06895 18f25b68fdb09b40406aeb5bc7f7ebd8 206 SUPERFAMILY SSF52833 1 84 1.55E-22 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS06895 18f25b68fdb09b40406aeb5bc7f7ebd8 206 Gene3D G3DSA:1.20.1050.10 89 200 4.3E-31 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS06895 18f25b68fdb09b40406aeb5bc7f7ebd8 206 SUPERFAMILY SSF47616 80 201 9.88E-29 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS06895 18f25b68fdb09b40406aeb5bc7f7ebd8 206 Gene3D G3DSA:3.40.30.10 2 88 2.0E-23 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS06895 18f25b68fdb09b40406aeb5bc7f7ebd8 206 Pfam PF13410 Glutathione S-transferase, C-terminal domain 126 190 3.6E-8 T 05-07-2017 AC028_RS06895 18f25b68fdb09b40406aeb5bc7f7ebd8 206 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 77 3.9E-15 T 05-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AC028_RS08590 abd02c9020298f635cde54c637e25895 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 73 1.0E-14 T 05-07-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AC028_RS08590 abd02c9020298f635cde54c637e25895 85 Gene3D G3DSA:3.40.1620.10 2 50 6.2E-9 T 05-07-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AC028_RS08590 abd02c9020298f635cde54c637e25895 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 56 3.9E-17 T 05-07-2017 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AC028_RS08590 abd02c9020298f635cde54c637e25895 85 SUPERFAMILY SSF143120 1 74 4.45E-15 T 05-07-2017 AC028_RS07005 82ea4680bed88da1e5585414cf608c42 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 4 28 1.0E-7 T 05-07-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS07005 82ea4680bed88da1e5585414cf608c42 46 Pfam PF00468 Ribosomal protein L34 3 46 5.2E-25 T 05-07-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS07005 82ea4680bed88da1e5585414cf608c42 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 46 1.2E-25 T 05-07-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS07005 82ea4680bed88da1e5585414cf608c42 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 3 46 16.576 T 05-07-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS07005 82ea4680bed88da1e5585414cf608c42 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 4 23 - T 05-07-2017 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 586 604 - T 05-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 613 631 - T 05-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 287 305 - T 05-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 590 606 0.025 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 434 448 0.088 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 813 829 0.11 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 60 76 17.0 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 963 980 0.017 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 183 198 0.063 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 626 639 1.2 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 572 588 1.6 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 607 624 0.051 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 392 406 0.0085 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 741 756 1.2 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 364 380 1.5 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 778 794 0.0016 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 331 344 4.4 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 408 424 0.26 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 796 812 0.01 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 982 997 1.1 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 726 739 41.0 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 459 474 5.6E-4 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 240 253 0.71 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 299 316 0.0033 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 946 954 8.9 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 200 216 2.3 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 77 94 0.15 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 345 362 9.9 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 284 298 0.01 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 74 92 - T 05-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 SUPERFAMILY SSF51120 34 131 1.96E-7 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 SUPERFAMILY SSF51120 166 321 1.05E-16 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 792 810 - T 05-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 737 755 - T 05-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 65 83 - T 05-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 SUPERFAMILY SSF51120 392 551 1.44E-23 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 SUPERFAMILY SSF51120 562 701 1.83E-22 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 455 473 - T 05-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 360 378 - T 05-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 801 819 - T 05-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 SUPERFAMILY SSF51120 726 919 1.15E-27 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 446 464 - T 05-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 PRINTS PR00313 NodO calcium binding signature 84 95 5.4E-8 T 05-07-2017 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 PRINTS PR00313 NodO calcium binding signature 300 308 5.4E-8 T 05-07-2017 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 PRINTS PR00313 NodO calcium binding signature 364 373 5.4E-8 T 05-07-2017 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 PRINTS PR00313 NodO calcium binding signature 247 255 5.4E-8 T 05-07-2017 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 450 471 6.3E-6 T 05-07-2017 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 87 105 6.3E-6 T 05-07-2017 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 595 613 - T 05-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 SUPERFAMILY SSF51120 923 1081 3.01E-19 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF06594 Haemolysin-type calcium binding protein related domain 875 919 3.7E-11 T 05-07-2017 IPR010566 Haemolysin-type calcium binding-related AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Pfam PF06594 Haemolysin-type calcium binding protein related domain 1042 1084 3.0E-6 T 05-07-2017 IPR010566 Haemolysin-type calcium binding-related AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 437 455 - T 05-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Gene3D G3DSA:2.150.10.10 726 919 4.6E-34 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Gene3D G3DSA:2.150.10.10 50 97 2.6E-24 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Gene3D G3DSA:2.150.10.10 164 272 2.6E-24 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Gene3D G3DSA:2.150.10.10 538 718 1.7E-29 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Gene3D G3DSA:2.150.10.10 925 1083 3.5E-22 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 Gene3D G3DSA:2.150.10.10 331 537 1.3E-38 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 SUPERFAMILY SSF51120 329 386 4.19E-10 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS15950 216f7c2ff1a62e53e285eb7263ea24fe 1180 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 604 622 - T 05-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AC028_RS16415 f8370214724cc5714583354d414414ef 331 SUPERFAMILY SSF46785 1 82 4.4E-21 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS16415 f8370214724cc5714583354d414414ef 331 SUPERFAMILY SSF53335 124 303 1.25E-36 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS16415 f8370214724cc5714583354d414414ef 331 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 1.2E-11 T 05-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AC028_RS16415 f8370214724cc5714583354d414414ef 331 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 1.2E-11 T 05-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AC028_RS16415 f8370214724cc5714583354d414414ef 331 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.2E-11 T 05-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AC028_RS16415 f8370214724cc5714583354d414414ef 331 Pfam PF08241 Methyltransferase domain 152 245 2.6E-24 T 05-07-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AC028_RS16415 f8370214724cc5714583354d414414ef 331 Gene3D G3DSA:3.40.50.150 114 309 3.2E-36 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS16415 f8370214724cc5714583354d414414ef 331 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 6.5E-15 T 05-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AC028_RS16415 f8370214724cc5714583354d414414ef 331 Gene3D G3DSA:1.10.10.10 1 77 1.8E-22 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS16415 f8370214724cc5714583354d414414ef 331 SMART SM00418 8 88 4.5E-19 T 05-07-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AC028_RS16115 6729335a53d75539fcc40c56442cfd10 118 SMART SM00530 9 65 1.2E-12 T 05-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AC028_RS16115 6729335a53d75539fcc40c56442cfd10 118 Pfam PF01381 Helix-turn-helix 10 65 2.7E-13 T 05-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AC028_RS16115 6729335a53d75539fcc40c56442cfd10 118 SUPERFAMILY SSF47413 3 66 3.94E-14 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS16115 6729335a53d75539fcc40c56442cfd10 118 Gene3D G3DSA:1.10.260.40 7 66 1.1E-15 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS17455 b5ffc72c58752e2acdadb8199d310932 465 Gene3D G3DSA:3.40.50.300 250 464 9.4E-62 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS17455 b5ffc72c58752e2acdadb8199d310932 465 SUPERFAMILY SSF52540 252 444 3.25E-29 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS17455 b5ffc72c58752e2acdadb8199d310932 465 SUPERFAMILY SSF52540 133 189 3.25E-29 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS17455 b5ffc72c58752e2acdadb8199d310932 465 Gene3D G3DSA:3.40.50.1010 8 66 3.6E-9 T 05-07-2017 IPR029060 PIN domain-like AC028_RS17455 b5ffc72c58752e2acdadb8199d310932 465 Gene3D G3DSA:3.40.50.1010 108 161 3.6E-9 T 05-07-2017 IPR029060 PIN domain-like AC028_RS17455 b5ffc72c58752e2acdadb8199d310932 465 Pfam PF02562 PhoH-like protein 253 454 3.3E-54 T 05-07-2017 IPR003714 PhoH-like protein GO:0005524 AC028_RS17455 b5ffc72c58752e2acdadb8199d310932 465 SMART SM00670 6 145 3.0E-12 T 05-07-2017 IPR002716 PIN domain AC028_RS17455 b5ffc72c58752e2acdadb8199d310932 465 SUPERFAMILY SSF88723 108 157 9.81E-11 T 05-07-2017 IPR029060 PIN domain-like AC028_RS17455 b5ffc72c58752e2acdadb8199d310932 465 SUPERFAMILY SSF88723 7 67 9.81E-11 T 05-07-2017 IPR029060 PIN domain-like AC028_RS17455 b5ffc72c58752e2acdadb8199d310932 465 Pfam PF13638 PIN domain 8 158 1.7E-39 T 05-07-2017 IPR002716 PIN domain AC028_RS00270 0fef1f39b267152e070f22e439e8d2d2 284 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 15 279 26.306 T 05-07-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AC028_RS00270 0fef1f39b267152e070f22e439e8d2d2 284 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 175 278 2.0E-34 T 05-07-2017 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AC028_RS00270 0fef1f39b267152e070f22e439e8d2d2 284 PIRSF PIRSF000193 14 282 2.5E-69 T 05-07-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AC028_RS00270 0fef1f39b267152e070f22e439e8d2d2 284 SUPERFAMILY SSF48179 174 280 8.33E-34 T 05-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AC028_RS00270 0fef1f39b267152e070f22e439e8d2d2 284 Gene3D G3DSA:1.10.3730.10 174 278 1.5E-36 T 05-07-2017 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AC028_RS00270 0fef1f39b267152e070f22e439e8d2d2 284 Gene3D G3DSA:3.40.50.720 15 172 2.9E-40 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS00270 0fef1f39b267152e070f22e439e8d2d2 284 SUPERFAMILY SSF51735 17 172 2.3E-32 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS00270 0fef1f39b267152e070f22e439e8d2d2 284 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 17 279 1.2E-82 T 05-07-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AC028_RS00270 0fef1f39b267152e070f22e439e8d2d2 284 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 17 111 3.6E-16 T 05-07-2017 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AC028_RS00270 0fef1f39b267152e070f22e439e8d2d2 284 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 234 257 - T 05-07-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AC028_RS07130 2b01d83c7f89117d4845206d74758cfa 396 Gene3D G3DSA:2.70.70.10 251 394 1.6E-37 T 05-07-2017 AC028_RS07130 2b01d83c7f89117d4845206d74758cfa 396 Pfam PF01551 Peptidase family M23 296 389 1.1E-27 T 05-07-2017 IPR016047 Peptidase M23 AC028_RS07130 2b01d83c7f89117d4845206d74758cfa 396 SUPERFAMILY SSF51261 184 393 2.93E-45 T 05-07-2017 IPR011055 Duplicated hybrid motif AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 PIRSF PIRSF000207 1 615 3.1E-199 T 05-07-2017 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 Gene3D G3DSA:3.40.50.360 63 215 3.2E-43 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 Pfam PF00667 FAD binding domain 270 442 3.2E-18 T 05-07-2017 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 Pfam PF00258 Flavodoxin 72 195 2.4E-30 T 05-07-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 615 1.2E-254 T 05-07-2017 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 Gene3D G3DSA:2.40.30.10 236 296 3.7E-29 T 05-07-2017 AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 Gene3D G3DSA:2.40.30.10 402 472 3.7E-29 T 05-07-2017 AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 SUPERFAMILY SSF52343 462 615 1.57E-48 T 05-07-2017 AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 PRINTS PR00369 Flavodoxin signature 175 194 3.3E-16 T 05-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 PRINTS PR00369 Flavodoxin signature 151 161 3.3E-16 T 05-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 PRINTS PR00369 Flavodoxin signature 119 130 3.3E-16 T 05-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 PRINTS PR00369 Flavodoxin signature 71 84 3.3E-16 T 05-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 Gene3D G3DSA:3.40.50.80 473 614 4.7E-53 T 05-07-2017 AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 542 558 3.4E-23 T 05-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 511 522 3.4E-23 T 05-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 565 573 3.4E-23 T 05-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 498 507 3.4E-23 T 05-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 404 411 3.4E-23 T 05-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 286 296 3.4E-23 T 05-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 473 492 3.4E-23 T 05-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 Pfam PF00175 Oxidoreductase NAD-binding domain 474 579 8.5E-19 T 05-07-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 Gene3D G3DSA:1.20.990.10 297 401 1.4E-31 T 05-07-2017 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 SUPERFAMILY SSF52218 68 214 7.24E-43 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS02180 769936da1f6110405a181e21a1b8fc7b 615 SUPERFAMILY SSF63380 233 463 2.78E-54 T 05-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AC028_RS17295 1228c2c6ce546296f28f03050a685ea1 259 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 253 41.087 T 05-07-2017 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AC028_RS17295 1228c2c6ce546296f28f03050a685ea1 259 Pfam PF01975 Survival protein SurE 3 185 2.1E-57 T 05-07-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AC028_RS17295 1228c2c6ce546296f28f03050a685ea1 259 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 236 2.1E-69 T 05-07-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AC028_RS17295 1228c2c6ce546296f28f03050a685ea1 259 Gene3D G3DSA:3.40.1210.10 1 248 1.9E-87 T 05-07-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AC028_RS17295 1228c2c6ce546296f28f03050a685ea1 259 SUPERFAMILY SSF64167 1 250 9.16E-84 T 05-07-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AC028_RS02485 ce1801e73b1b511e4a8bebb04a4b576e 840 Gene3D G3DSA:3.40.710.10 270 351 1.2E-125 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS02485 ce1801e73b1b511e4a8bebb04a4b576e 840 Gene3D G3DSA:3.40.710.10 695 816 1.2E-125 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS02485 ce1801e73b1b511e4a8bebb04a4b576e 840 Gene3D G3DSA:3.40.710.10 449 639 1.2E-125 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS02485 ce1801e73b1b511e4a8bebb04a4b576e 840 Pfam PF00905 Penicillin binding protein transpeptidase domain 455 625 1.6E-21 T 05-07-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AC028_RS02485 ce1801e73b1b511e4a8bebb04a4b576e 840 Pfam PF17092 Penicillin-binding protein OB-like domain 354 450 2.7E-9 T 05-07-2017 IPR031376 Penicillin-binding protein, OB-like domain AC028_RS02485 ce1801e73b1b511e4a8bebb04a4b576e 840 Gene3D G3DSA:1.10.3810.10 92 269 2.5E-65 T 05-07-2017 AC028_RS02485 ce1801e73b1b511e4a8bebb04a4b576e 840 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 101 788 4.4E-171 T 05-07-2017 AC028_RS02485 ce1801e73b1b511e4a8bebb04a4b576e 840 SUPERFAMILY SSF56601 449 636 5.97E-117 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS02485 ce1801e73b1b511e4a8bebb04a4b576e 840 SUPERFAMILY SSF56601 300 351 5.97E-117 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS02485 ce1801e73b1b511e4a8bebb04a4b576e 840 SUPERFAMILY SSF56601 248 271 5.97E-117 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS02485 ce1801e73b1b511e4a8bebb04a4b576e 840 SUPERFAMILY SSF56601 694 817 5.97E-117 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS02485 ce1801e73b1b511e4a8bebb04a4b576e 840 Gene3D G3DSA:2.40.50.140 383 448 8.6E-4 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS02485 ce1801e73b1b511e4a8bebb04a4b576e 840 Pfam PF00912 Transglycosylase 92 267 1.2E-56 T 05-07-2017 IPR001264 Glycosyl transferase, family 51 AC028_RS02485 ce1801e73b1b511e4a8bebb04a4b576e 840 SUPERFAMILY SSF53955 79 294 8.72E-69 T 05-07-2017 IPR023346 Lysozyme-like domain AC028_RS21530 d459f738f9bfbefd572e70bf922c0509 308 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 299 17.738 T 05-07-2017 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS21530 d459f738f9bfbefd572e70bf922c0509 308 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 240 1.7E-16 T 05-07-2017 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 AC028_RS21530 d459f738f9bfbefd572e70bf922c0509 308 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 219 8.4E-67 T 05-07-2017 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS21530 d459f738f9bfbefd572e70bf922c0509 308 SUPERFAMILY SSF88697 244 300 4.72E-7 T 05-07-2017 IPR015947 PUA-like domain AC028_RS21530 d459f738f9bfbefd572e70bf922c0509 308 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 245 299 5.6E-11 T 05-07-2017 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS21530 d459f738f9bfbefd572e70bf922c0509 308 SUPERFAMILY SSF55120 9 224 5.76E-71 T 05-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS21530 d459f738f9bfbefd572e70bf922c0509 308 Gene3D G3DSA:2.30.130.10 242 300 2.9E-14 T 05-07-2017 IPR015947 PUA-like domain AC028_RS21530 d459f738f9bfbefd572e70bf922c0509 308 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 180 6.8E-48 T 05-07-2017 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AC028_RS19270 02958f5d87cbca7238eb34cc51c4b2c2 248 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 244 33.156 T 05-07-2017 IPR020936 Uncharacterised protein family UPF0176 AC028_RS19270 02958f5d87cbca7238eb34cc51c4b2c2 248 Pfam PF00581 Rhodanese-like domain 118 212 2.6E-5 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS19270 02958f5d87cbca7238eb34cc51c4b2c2 248 Gene3D G3DSA:3.40.250.10 102 228 6.7E-28 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS19270 02958f5d87cbca7238eb34cc51c4b2c2 248 SUPERFAMILY SSF52821 103 233 1.3E-24 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS19270 02958f5d87cbca7238eb34cc51c4b2c2 248 SMART SM00450 117 218 6.0E-12 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS21405 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF01609 Transposase DDE domain 135 310 8.0E-35 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS21405 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS02405 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF01609 Transposase DDE domain 135 310 8.0E-35 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS02405 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS02415 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF01609 Transposase DDE domain 135 310 8.0E-35 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS02415 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS17740 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF01609 Transposase DDE domain 135 310 8.0E-35 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS17740 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS03245 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF01609 Transposase DDE domain 135 310 8.0E-35 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS03245 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS20980 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF01609 Transposase DDE domain 135 310 8.0E-35 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS20980 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS05070 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF01609 Transposase DDE domain 135 310 8.0E-35 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS05070 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS11035 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF01609 Transposase DDE domain 135 310 8.0E-35 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS11035 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS09045 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF01609 Transposase DDE domain 135 310 8.0E-35 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS09045 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS21650 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF01609 Transposase DDE domain 135 310 8.0E-35 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS21650 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS16005 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF01609 Transposase DDE domain 135 310 8.0E-35 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS16005 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS07410 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF01609 Transposase DDE domain 135 310 8.0E-35 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS07410 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS04740 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF01609 Transposase DDE domain 135 310 8.0E-35 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS04740 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS07375 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF01609 Transposase DDE domain 135 310 8.0E-35 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS07375 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS08885 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF01609 Transposase DDE domain 135 310 8.0E-35 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS08885 c83b6a17ef021a82c050296ba3451aa5 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS17110 7a1ebf98bf23a1c7f07b0dd6f80f7581 317 SUPERFAMILY SSF75005 68 301 2.98E-23 T 05-07-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AC028_RS17110 7a1ebf98bf23a1c7f07b0dd6f80f7581 317 Gene3D G3DSA:2.115.10.20 210 254 3.3E-6 T 05-07-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AC028_RS17110 7a1ebf98bf23a1c7f07b0dd6f80f7581 317 Gene3D G3DSA:2.115.10.20 94 150 3.3E-6 T 05-07-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AC028_RS21105 83e3259187077f9c72b612db6c73b92d 238 Gene3D G3DSA:1.10.10.60 131 187 4.5E-14 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS21105 83e3259187077f9c72b612db6c73b92d 238 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 135 179 - T 05-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AC028_RS21105 83e3259187077f9c72b612db6c73b92d 238 Pfam PF12833 Helix-turn-helix domain 156 233 1.1E-23 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS21105 83e3259187077f9c72b612db6c73b92d 238 Gene3D G3DSA:1.10.10.60 188 233 5.8E-15 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS21105 83e3259187077f9c72b612db6c73b92d 238 SUPERFAMILY SSF46689 187 233 3.45E-11 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS21105 83e3259187077f9c72b612db6c73b92d 238 SMART SM00342 150 232 1.1E-26 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS21105 83e3259187077f9c72b612db6c73b92d 238 Gene3D G3DSA:3.30.450.20 13 122 2.7E-11 T 05-07-2017 AC028_RS21105 83e3259187077f9c72b612db6c73b92d 238 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 187 228 - T 05-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AC028_RS21105 83e3259187077f9c72b612db6c73b92d 238 SUPERFAMILY SSF55785 13 122 4.54E-11 T 05-07-2017 IPR000014 PAS domain AC028_RS21105 83e3259187077f9c72b612db6c73b92d 238 SUPERFAMILY SSF46689 133 183 9.32E-9 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS21105 83e3259187077f9c72b612db6c73b92d 238 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 216 232 2.1E-6 T 05-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AC028_RS21105 83e3259187077f9c72b612db6c73b92d 238 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 201 216 2.1E-6 T 05-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AC028_RS21105 83e3259187077f9c72b612db6c73b92d 238 Pfam PF08448 PAS fold 17 125 8.2E-20 T 05-07-2017 IPR013656 PAS fold-4 AC028_RS16685 060fd19e48f3da7f39d27ccce99791a8 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 05-07-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AC028_RS16685 060fd19e48f3da7f39d27ccce99791a8 220 Pfam PF00484 Carbonic anhydrase 37 188 8.0E-50 T 05-07-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AC028_RS16685 060fd19e48f3da7f39d27ccce99791a8 220 Gene3D G3DSA:3.40.1050.10 1 205 1.7E-75 T 05-07-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AC028_RS16685 060fd19e48f3da7f39d27ccce99791a8 220 SMART SM00947 30 193 1.6E-66 T 05-07-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AC028_RS16685 060fd19e48f3da7f39d27ccce99791a8 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 05-07-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AC028_RS16685 060fd19e48f3da7f39d27ccce99791a8 220 SUPERFAMILY SSF53056 1 211 9.16E-75 T 05-07-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AC028_RS08170 9b878c6957a0b8e167e0342039aad4c8 610 Pfam PF00563 EAL domain 370 594 2.5E-37 T 05-07-2017 IPR001633 EAL domain AC028_RS08170 9b878c6957a0b8e167e0342039aad4c8 610 SMART SM00267 191 356 9.0E-6 T 05-07-2017 IPR000160 GGDEF domain AC028_RS08170 9b878c6957a0b8e167e0342039aad4c8 610 Pfam PF00072 Response regulator receiver domain 68 179 2.5E-22 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS08170 9b878c6957a0b8e167e0342039aad4c8 610 SUPERFAMILY SSF141868 370 594 3.14E-36 T 05-07-2017 IPR001633 EAL domain AC028_RS08170 9b878c6957a0b8e167e0342039aad4c8 610 Gene3D G3DSA:3.40.50.2300 65 199 1.1E-31 T 05-07-2017 AC028_RS08170 9b878c6957a0b8e167e0342039aad4c8 610 SUPERFAMILY SSF55073 206 349 3.3E-12 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS08170 9b878c6957a0b8e167e0342039aad4c8 610 SMART SM00448 66 179 1.9E-29 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS08170 9b878c6957a0b8e167e0342039aad4c8 610 Gene3D G3DSA:3.20.20.450 370 595 2.2E-36 T 05-07-2017 IPR001633 EAL domain AC028_RS08170 9b878c6957a0b8e167e0342039aad4c8 610 SUPERFAMILY SSF52172 64 190 8.54E-33 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS08170 9b878c6957a0b8e167e0342039aad4c8 610 Gene3D G3DSA:3.30.70.270 204 348 1.8E-13 T 05-07-2017 AC028_RS08170 9b878c6957a0b8e167e0342039aad4c8 610 Pfam PF00990 Diguanylate cyclase, GGDEF domain 206 340 3.1E-7 T 05-07-2017 IPR000160 GGDEF domain AC028_RS08170 9b878c6957a0b8e167e0342039aad4c8 610 SMART SM00052 360 602 4.7E-11 T 05-07-2017 IPR001633 EAL domain AC028_RS09505 624de2abd93726aa8c238bc3d002e611 276 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 87 106 5.2E-25 T 05-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AC028_RS09505 624de2abd93726aa8c238bc3d002e611 276 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 211 230 5.2E-25 T 05-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AC028_RS09505 624de2abd93726aa8c238bc3d002e611 276 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 189 211 5.2E-25 T 05-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AC028_RS09505 624de2abd93726aa8c238bc3d002e611 276 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 28 49 5.2E-25 T 05-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AC028_RS09505 624de2abd93726aa8c238bc3d002e611 276 Pfam PF01311 Bacterial export proteins, family 1 20 252 2.1E-48 T 05-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AC028_RS09505 624de2abd93726aa8c238bc3d002e611 276 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 13 264 1.1E-79 T 05-07-2017 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 AC028_RS06470 56881f85a12fef31052c28625d7fcdc3 243 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 66 79 - T 05-07-2017 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AC028_RS06470 56881f85a12fef31052c28625d7fcdc3 243 SMART SM00934 13 230 5.5E-71 T 05-07-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AC028_RS06470 56881f85a12fef31052c28625d7fcdc3 243 Gene3D G3DSA:3.20.20.70 11 234 3.3E-67 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS06470 56881f85a12fef31052c28625d7fcdc3 243 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 14 231 6.2E-66 T 05-07-2017 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AC028_RS06470 56881f85a12fef31052c28625d7fcdc3 243 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 13 229 2.2E-41 T 05-07-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AC028_RS06470 56881f85a12fef31052c28625d7fcdc3 243 SUPERFAMILY SSF51366 12 234 6.28E-59 T 05-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AC028_RS06470 56881f85a12fef31052c28625d7fcdc3 243 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 11 235 31.751 T 05-07-2017 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AC028_RS10400 c242959e6deb5b46bac52f97e642f4fc 369 SUPERFAMILY SSF50129 1 187 2.74E-72 T 05-07-2017 IPR011032 GroES-like AC028_RS10400 c242959e6deb5b46bac52f97e642f4fc 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 05-07-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AC028_RS10400 c242959e6deb5b46bac52f97e642f4fc 369 Gene3D G3DSA:3.90.180.10 2 190 3.4E-69 T 05-07-2017 IPR011032 GroES-like AC028_RS10400 c242959e6deb5b46bac52f97e642f4fc 369 Gene3D G3DSA:3.40.50.720 191 309 9.0E-43 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS10400 c242959e6deb5b46bac52f97e642f4fc 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 2.2E-224 T 05-07-2017 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|Reactome: R-HSA-71384 AC028_RS10400 c242959e6deb5b46bac52f97e642f4fc 369 Pfam PF00107 Zinc-binding dehydrogenase 197 329 1.1E-23 T 05-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AC028_RS10400 c242959e6deb5b46bac52f97e642f4fc 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 151 6.5E-26 T 05-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AC028_RS10400 c242959e6deb5b46bac52f97e642f4fc 369 SUPERFAMILY SSF51735 160 333 2.82E-47 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS10400 c242959e6deb5b46bac52f97e642f4fc 369 SMART SM00829 10 367 0.0022 T 05-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AC028_RS10400 c242959e6deb5b46bac52f97e642f4fc 369 SUPERFAMILY SSF50129 318 369 2.82E-12 T 05-07-2017 IPR011032 GroES-like AC028_RS01820 7f7c72aaca675505954a61f7319aa2b6 293 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 12 258 1.3E-79 T 05-07-2017 IPR017689 Outer membrane protein assembly factor BamD AC028_RS01820 7f7c72aaca675505954a61f7319aa2b6 293 Pfam PF13525 Outer membrane lipoprotein 40 244 3.8E-57 T 05-07-2017 AC028_RS01820 7f7c72aaca675505954a61f7319aa2b6 293 Gene3D G3DSA:1.25.40.10 203 244 1.3E-12 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS01820 7f7c72aaca675505954a61f7319aa2b6 293 Gene3D G3DSA:1.25.40.10 43 167 1.3E-12 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS01820 7f7c72aaca675505954a61f7319aa2b6 293 SUPERFAMILY SSF48452 42 130 6.48E-11 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS01820 7f7c72aaca675505954a61f7319aa2b6 293 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 10 252 35.322 T 05-07-2017 IPR017689 Outer membrane protein assembly factor BamD AC028_RS21835 e0c8de417da1111ce4ccee3fec4b120b 283 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 264 1.8E-101 T 05-07-2017 IPR019591 Mrp/NBP35 ATP-binding protein AC028_RS21835 e0c8de417da1111ce4ccee3fec4b120b 283 Gene3D G3DSA:3.40.50.300 19 262 7.3E-103 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS21835 e0c8de417da1111ce4ccee3fec4b120b 283 SUPERFAMILY SSF52540 24 269 1.65E-61 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS21835 e0c8de417da1111ce4ccee3fec4b120b 283 Hamap MF_02040 Iron-sulfur cluster carrier protein. 10 269 37.723 T 05-07-2017 IPR019591 Mrp/NBP35 ATP-binding protein AC028_RS21835 e0c8de417da1111ce4ccee3fec4b120b 283 ProSitePatterns PS01215 Mrp family signature. 128 144 - T 05-07-2017 IPR000808 Mrp, conserved site GO:0005524 AC028_RS19200 b31da31cb2429fec56c95a5bc905e9e4 164 Gene3D G3DSA:3.40.50.270 1 152 5.6E-49 T 05-07-2017 AC028_RS19200 b31da31cb2429fec56c95a5bc905e9e4 164 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 144 5.5E-37 T 05-07-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily AC028_RS19200 b31da31cb2429fec56c95a5bc905e9e4 164 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 46 62 7.2E-24 T 05-07-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AC028_RS19200 b31da31cb2429fec56c95a5bc905e9e4 164 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 7.2E-24 T 05-07-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AC028_RS19200 b31da31cb2429fec56c95a5bc905e9e4 164 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 122 137 7.2E-24 T 05-07-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AC028_RS19200 b31da31cb2429fec56c95a5bc905e9e4 164 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 80 95 7.2E-24 T 05-07-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AC028_RS19200 b31da31cb2429fec56c95a5bc905e9e4 164 SUPERFAMILY SSF52788 1 150 1.06E-47 T 05-07-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily AC028_RS19200 b31da31cb2429fec56c95a5bc905e9e4 164 SMART SM00226 1 150 9.4E-48 T 05-07-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily AC028_RS10725 6fad3dfdda1198a77ed2cd2ae118c2d3 311 SUPERFAMILY SSF51735 7 173 7.89E-34 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS10725 6fad3dfdda1198a77ed2cd2ae118c2d3 311 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 117 4.1E-17 T 05-07-2017 IPR000683 Oxidoreductase, N-terminal GO:0016491 AC028_RS10725 6fad3dfdda1198a77ed2cd2ae118c2d3 311 Gene3D G3DSA:3.40.50.720 7 185 2.0E-28 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS16155 5f30ec9441003b7125319ba29efc4fb5 167 TIGRFAM TIGR00086 smpB: SsrA-binding protein 19 160 1.7E-51 T 05-07-2017 IPR000037 SsrA-binding protein GO:0003723 AC028_RS16155 5f30ec9441003b7125319ba29efc4fb5 167 Gene3D G3DSA:2.40.280.10 17 138 4.3E-47 T 05-07-2017 IPR023620 Small protein B AC028_RS16155 5f30ec9441003b7125319ba29efc4fb5 167 ProSitePatterns PS01317 SsrA-binding protein. 37 49 - T 05-07-2017 IPR020081 SsrA-binding protein, conserved site AC028_RS16155 5f30ec9441003b7125319ba29efc4fb5 167 SUPERFAMILY SSF74982 14 143 5.1E-48 T 05-07-2017 IPR023620 Small protein B AC028_RS16155 5f30ec9441003b7125319ba29efc4fb5 167 Pfam PF01668 SmpB protein 18 81 1.4E-26 T 05-07-2017 IPR000037 SsrA-binding protein GO:0003723 AC028_RS16155 5f30ec9441003b7125319ba29efc4fb5 167 Hamap MF_00023 SsrA-binding protein [smpB]. 1 166 68.409 T 05-07-2017 IPR000037 SsrA-binding protein GO:0003723 AC028_RS16155 5f30ec9441003b7125319ba29efc4fb5 167 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 19 143 1.0E-67 T 05-07-2017 IPR000037 SsrA-binding protein GO:0003723 AC028_RS07825 d72914836933f1a19ea40a9da82eee52 518 Gene3D G3DSA:3.30.70.270 359 515 4.3E-46 T 05-07-2017 AC028_RS07825 d72914836933f1a19ea40a9da82eee52 518 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 359 516 1.9E-38 T 05-07-2017 IPR000160 GGDEF domain AC028_RS07825 d72914836933f1a19ea40a9da82eee52 518 SMART SM00267 346 517 6.7E-42 T 05-07-2017 IPR000160 GGDEF domain AC028_RS07825 d72914836933f1a19ea40a9da82eee52 518 SUPERFAMILY SSF55073 362 515 6.04E-42 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS07825 d72914836933f1a19ea40a9da82eee52 518 Pfam PF00990 Diguanylate cyclase, GGDEF domain 360 513 1.8E-34 T 05-07-2017 IPR000160 GGDEF domain AC028_RS06200 1c04c2ce3c5a18c7024b8521d1758fc2 394 SUPERFAMILY SSF54373 174 274 7.45E-44 T 05-07-2017 AC028_RS06200 1c04c2ce3c5a18c7024b8521d1758fc2 394 Gene3D G3DSA:3.30.9.10 152 298 3.1E-67 T 05-07-2017 AC028_RS06200 1c04c2ce3c5a18c7024b8521d1758fc2 394 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 1 389 2.1E-187 T 05-07-2017 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 AC028_RS06200 1c04c2ce3c5a18c7024b8521d1758fc2 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 8.4E-28 T 05-07-2017 AC028_RS06200 1c04c2ce3c5a18c7024b8521d1758fc2 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 8.4E-28 T 05-07-2017 AC028_RS06200 1c04c2ce3c5a18c7024b8521d1758fc2 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 150 165 8.4E-28 T 05-07-2017 AC028_RS06200 1c04c2ce3c5a18c7024b8521d1758fc2 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 8.4E-28 T 05-07-2017 AC028_RS06200 1c04c2ce3c5a18c7024b8521d1758fc2 394 Gene3D G3DSA:3.40.50.720 2 151 3.6E-9 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS06200 1c04c2ce3c5a18c7024b8521d1758fc2 394 SUPERFAMILY SSF51905 1 171 2.78E-51 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS06200 1c04c2ce3c5a18c7024b8521d1758fc2 394 SUPERFAMILY SSF51905 273 388 2.78E-51 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS06200 1c04c2ce3c5a18c7024b8521d1758fc2 394 Pfam PF01494 FAD binding domain 2 342 6.0E-84 T 05-07-2017 IPR002938 FAD-binding domain GO:0071949 AC028_RS16420 8824f0adf958b30f9132412bc4b52471 382 SUPERFAMILY SSF56645 2 242 8.77E-73 T 05-07-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AC028_RS16420 8824f0adf958b30f9132412bc4b52471 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 2.6E-26 T 05-07-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AC028_RS16420 8824f0adf958b30f9132412bc4b52471 382 Gene3D G3DSA:1.20.140.10 218 380 3.1E-67 T 05-07-2017 AC028_RS16420 8824f0adf958b30f9132412bc4b52471 382 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 05-07-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AC028_RS16420 8824f0adf958b30f9132412bc4b52471 382 Gene3D G3DSA:2.40.110.10 121 217 1.1E-34 T 05-07-2017 AC028_RS16420 8824f0adf958b30f9132412bc4b52471 382 SUPERFAMILY SSF47203 229 380 1.43E-57 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS16420 8824f0adf958b30f9132412bc4b52471 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 377 3.9E-49 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS16420 8824f0adf958b30f9132412bc4b52471 382 Gene3D G3DSA:1.10.540.10 2 119 8.4E-37 T 05-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AC028_RS16420 8824f0adf958b30f9132412bc4b52471 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 1.1E-29 T 05-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AC028_RS16420 8824f0adf958b30f9132412bc4b52471 382 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 05-07-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AC028_RS10205 fb9c5bb056a206e8196fba5204b1e5a1 400 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 397 9.9E-136 T 05-07-2017 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 AC028_RS10205 fb9c5bb056a206e8196fba5204b1e5a1 400 Pfam PF00482 Type II secretion system (T2SS), protein F 66 188 2.6E-25 T 05-07-2017 IPR018076 Type II secretion system F domain AC028_RS10205 fb9c5bb056a206e8196fba5204b1e5a1 400 Pfam PF00482 Type II secretion system (T2SS), protein F 269 390 1.5E-26 T 05-07-2017 IPR018076 Type II secretion system F domain AC028_RS10205 fb9c5bb056a206e8196fba5204b1e5a1 400 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 160 188 - T 05-07-2017 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AC028_RS10205 fb9c5bb056a206e8196fba5204b1e5a1 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 379 398 9.4E-30 T 05-07-2017 IPR003004 GspF/PilC family AC028_RS10205 fb9c5bb056a206e8196fba5204b1e5a1 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 62 74 9.4E-30 T 05-07-2017 IPR003004 GspF/PilC family AC028_RS10205 fb9c5bb056a206e8196fba5204b1e5a1 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 363 377 9.4E-30 T 05-07-2017 IPR003004 GspF/PilC family AC028_RS10205 fb9c5bb056a206e8196fba5204b1e5a1 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 160 188 9.4E-30 T 05-07-2017 IPR003004 GspF/PilC family AC028_RS15415 69ad8e9e7d51214f3119ddaedc2d874f 337 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 221 256 7.3E-6 T 05-07-2017 IPR001451 Hexapeptide repeat AC028_RS15415 69ad8e9e7d51214f3119ddaedc2d874f 337 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 139 178 5.3E-5 T 05-07-2017 IPR001451 Hexapeptide repeat AC028_RS15415 69ad8e9e7d51214f3119ddaedc2d874f 337 SUPERFAMILY SSF51161 32 316 3.22E-77 T 05-07-2017 IPR011004 Trimeric LpxA-like AC028_RS15415 69ad8e9e7d51214f3119ddaedc2d874f 337 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 88 5.7E-24 T 05-07-2017 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 AC028_RS15415 69ad8e9e7d51214f3119ddaedc2d874f 337 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 328 1.4E-125 T 05-07-2017 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AC028_RS15415 69ad8e9e7d51214f3119ddaedc2d874f 337 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 8 325 36.063 T 05-07-2017 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AC028_RS15415 69ad8e9e7d51214f3119ddaedc2d874f 337 Gene3D G3DSA:2.160.10.10 99 305 2.0E-42 T 05-07-2017 AC028_RS21715 79f591db10393dbcab6e6b4a7f0f2729 257 Gene3D G3DSA:3.30.70.660 108 240 8.8E-42 T 05-07-2017 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS21715 79f591db10393dbcab6e6b4a7f0f2729 257 Pfam PF01416 tRNA pseudouridine synthase 144 241 5.2E-25 T 05-07-2017 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS21715 79f591db10393dbcab6e6b4a7f0f2729 257 Pfam PF01416 tRNA pseudouridine synthase 8 104 1.9E-6 T 05-07-2017 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS21715 79f591db10393dbcab6e6b4a7f0f2729 257 SUPERFAMILY SSF55120 1 252 2.45E-80 T 05-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS21715 79f591db10393dbcab6e6b4a7f0f2729 257 PIRSF PIRSF001430 1 255 5.6E-64 T 05-07-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS21715 79f591db10393dbcab6e6b4a7f0f2729 257 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 4 239 6.1E-58 T 05-07-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS21715 79f591db10393dbcab6e6b4a7f0f2729 257 Gene3D G3DSA:3.30.70.580 1 106 1.1E-31 T 05-07-2017 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS21715 79f591db10393dbcab6e6b4a7f0f2729 257 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 245 30.699 T 05-07-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 SUPERFAMILY SSF50341 528 660 1.01E-31 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 SMART SM00387 389 529 7.8E-26 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 Pfam PF01584 CheW-like domain 534 663 4.4E-27 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 Pfam PF01627 Hpt domain 10 100 1.3E-18 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 Gene3D G3DSA:2.40.50.180 553 615 9.6E-11 T 05-07-2017 AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 SUPERFAMILY SSF47384 282 345 6.67E-14 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 SMART SM01231 281 344 4.3E-18 T 05-07-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 282 342 8.7E-16 T 05-07-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 SUPERFAMILY SSF47226 5 129 4.58E-32 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 Gene3D G3DSA:2.30.30.40 529 550 5.3E-23 T 05-07-2017 AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 Gene3D G3DSA:2.30.30.40 616 659 5.3E-23 T 05-07-2017 AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 Gene3D G3DSA:3.30.565.10 346 528 2.0E-33 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 SUPERFAMILY SSF55874 346 527 1.31E-37 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 SMART SM00073 4 102 2.6E-29 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 Gene3D G3DSA:1.20.120.160 2 145 4.5E-41 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 Gene3D G3DSA:1.10.287.560 281 345 2.6E-19 T 05-07-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 392 528 4.7E-16 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 SMART SM00260 521 660 7.4E-34 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 483 3.6E-13 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 526 3.6E-13 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 3.6E-13 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS18210 74895355535e7cf7aa10e58fdca6a151 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 507 3.6E-13 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS03880 92dfa495017a95b7da2ec0223e136b47 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 8.4E-16 T 05-07-2017 AC028_RS03880 92dfa495017a95b7da2ec0223e136b47 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 8.4E-16 T 05-07-2017 AC028_RS03880 92dfa495017a95b7da2ec0223e136b47 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 147 162 8.4E-16 T 05-07-2017 AC028_RS03880 92dfa495017a95b7da2ec0223e136b47 423 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 8.4E-16 T 05-07-2017 AC028_RS03880 92dfa495017a95b7da2ec0223e136b47 423 Pfam PF01494 FAD binding domain 7 339 8.4E-23 T 05-07-2017 IPR002938 FAD-binding domain GO:0071949 AC028_RS03880 92dfa495017a95b7da2ec0223e136b47 423 Gene3D G3DSA:3.50.50.60 270 352 4.3E-29 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS03880 92dfa495017a95b7da2ec0223e136b47 423 Gene3D G3DSA:3.50.50.60 6 174 4.3E-29 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS03880 92dfa495017a95b7da2ec0223e136b47 423 SUPERFAMILY SSF51905 6 168 2.53E-49 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS03880 92dfa495017a95b7da2ec0223e136b47 423 SUPERFAMILY SSF51905 269 377 2.53E-49 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS17665 8fc67700cacfbf844c6ed92b061e7609 328 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 146 155 - T 05-07-2017 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 AC028_RS17665 8fc67700cacfbf844c6ed92b061e7609 328 Gene3D G3DSA:3.20.20.80 28 324 2.5E-69 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS17665 8fc67700cacfbf844c6ed92b061e7609 328 SUPERFAMILY SSF51445 26 323 1.91E-70 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS17665 8fc67700cacfbf844c6ed92b061e7609 328 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 38 283 4.0E-32 T 05-07-2017 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 AC028_RS18250 e7d2f54787f749877d0b0a3518e08684 1013 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 159 6.6E-16 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS18250 e7d2f54787f749877d0b0a3518e08684 1013 Pfam PF00593 TonB dependent receptor 729 1012 1.1E-32 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS18250 e7d2f54787f749877d0b0a3518e08684 1013 SUPERFAMILY SSF56935 25 403 1.4E-37 T 05-07-2017 AC028_RS18250 e7d2f54787f749877d0b0a3518e08684 1013 Gene3D G3DSA:2.40.170.20 159 218 7.1E-57 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS18250 e7d2f54787f749877d0b0a3518e08684 1013 Gene3D G3DSA:2.40.170.20 403 456 7.1E-57 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS18250 e7d2f54787f749877d0b0a3518e08684 1013 Gene3D G3DSA:2.40.170.20 722 1013 7.1E-57 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS18250 e7d2f54787f749877d0b0a3518e08684 1013 Gene3D G3DSA:2.40.170.20 503 555 7.1E-57 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS18250 e7d2f54787f749877d0b0a3518e08684 1013 Gene3D G3DSA:2.40.170.20 253 320 7.1E-57 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS18250 e7d2f54787f749877d0b0a3518e08684 1013 Gene3D G3DSA:2.40.170.20 624 654 7.1E-57 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS18250 e7d2f54787f749877d0b0a3518e08684 1013 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 32 1013 1.7E-258 T 05-07-2017 IPR010104 Bacterial TonB-dependent receptor AC028_RS18250 e7d2f54787f749877d0b0a3518e08684 1013 Gene3D G3DSA:2.170.130.10 35 158 1.3E-18 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS18250 e7d2f54787f749877d0b0a3518e08684 1013 SUPERFAMILY SSF56935 722 760 6.54E-49 T 05-07-2017 AC028_RS18250 e7d2f54787f749877d0b0a3518e08684 1013 SUPERFAMILY SSF56935 789 1013 6.54E-49 T 05-07-2017 AC028_RS18250 e7d2f54787f749877d0b0a3518e08684 1013 SUPERFAMILY SSF56935 400 667 6.54E-49 T 05-07-2017 AC028_RS03680 dbb1ae172637c9f63b84850076eab5e2 356 Pfam PF02353 Mycolic acid cyclopropane synthetase 77 338 1.4E-36 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS03680 dbb1ae172637c9f63b84850076eab5e2 356 SUPERFAMILY SSF53335 79 352 3.07E-60 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS03680 dbb1ae172637c9f63b84850076eab5e2 356 Gene3D G3DSA:3.40.50.150 73 352 1.8E-81 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS10030 61d58b57d6a3fc6b24e70a9743721fe8 472 Gene3D G3DSA:2.40.40.10 176 220 1.0E-4 T 05-07-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain AC028_RS10030 61d58b57d6a3fc6b24e70a9743721fe8 472 Gene3D G3DSA:3.30.70.1070 398 464 7.9E-7 T 05-07-2017 IPR007730 Sporulation-related domain GO:0042834 AC028_RS10030 61d58b57d6a3fc6b24e70a9743721fe8 472 SUPERFAMILY SSF50685 123 220 4.19E-10 T 05-07-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain AC028_RS10030 61d58b57d6a3fc6b24e70a9743721fe8 472 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 137 237 3.7E-41 T 05-07-2017 IPR012997 Rare lipoprotein A AC028_RS10030 61d58b57d6a3fc6b24e70a9743721fe8 472 Pfam PF03330 Lytic transglycolase 135 224 6.1E-24 T 05-07-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain AC028_RS10030 61d58b57d6a3fc6b24e70a9743721fe8 472 SUPERFAMILY SSF110997 399 469 4.58E-7 T 05-07-2017 IPR007730 Sporulation-related domain GO:0042834 AC028_RS10030 61d58b57d6a3fc6b24e70a9743721fe8 472 Pfam PF05036 Sporulation related domain 397 470 2.0E-11 T 05-07-2017 IPR007730 Sporulation-related domain GO:0042834 AC028_RS11430 636859102f7a74962fb8789440cc850f 562 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 400 410 - T 05-07-2017 IPR023828 Peptidase S8, subtilisin, Ser-active site AC028_RS11430 636859102f7a74962fb8789440cc850f 562 SUPERFAMILY SSF52743 149 196 7.86E-75 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS11430 636859102f7a74962fb8789440cc850f 562 SUPERFAMILY SSF52743 223 463 7.86E-75 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS11430 636859102f7a74962fb8789440cc850f 562 PRINTS PR00723 Subtilisin serine protease family (S8) signature 226 239 3.3E-18 T 05-07-2017 IPR015500 Peptidase S8, subtilisin-related AC028_RS11430 636859102f7a74962fb8789440cc850f 562 PRINTS PR00723 Subtilisin serine protease family (S8) signature 399 415 3.3E-18 T 05-07-2017 IPR015500 Peptidase S8, subtilisin-related AC028_RS11430 636859102f7a74962fb8789440cc850f 562 PRINTS PR00723 Subtilisin serine protease family (S8) signature 161 180 3.3E-18 T 05-07-2017 IPR015500 Peptidase S8, subtilisin-related AC028_RS11430 636859102f7a74962fb8789440cc850f 562 Pfam PF00082 Subtilase family 161 448 1.2E-51 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS11430 636859102f7a74962fb8789440cc850f 562 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 230 240 - T 05-07-2017 IPR022398 Peptidase S8, subtilisin, His-active site AC028_RS11430 636859102f7a74962fb8789440cc850f 562 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 483 547 8.2E-13 T 05-07-2017 IPR007280 Peptidase, C-terminal, archaeal/bacterial AC028_RS11430 636859102f7a74962fb8789440cc850f 562 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 166 176 - T 05-07-2017 IPR023827 Peptidase S8, subtilisin, Asp-active site AC028_RS11430 636859102f7a74962fb8789440cc850f 562 Gene3D G3DSA:3.40.50.200 105 460 1.5E-87 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS08445 73c42990cbdb783d18305dbe66b43efe 941 SUPERFAMILY SSF81593 800 895 4.24E-20 T 05-07-2017 AC028_RS08445 73c42990cbdb783d18305dbe66b43efe 941 Gene3D G3DSA:3.30.460.10 113 284 2.5E-54 T 05-07-2017 AC028_RS08445 73c42990cbdb783d18305dbe66b43efe 941 Gene3D G3DSA:3.30.460.10 631 797 8.1E-54 T 05-07-2017 AC028_RS08445 73c42990cbdb783d18305dbe66b43efe 941 SUPERFAMILY SSF81593 286 435 1.41E-41 T 05-07-2017 AC028_RS08445 73c42990cbdb783d18305dbe66b43efe 941 Pfam PF08335 GlnD PII-uridylyltransferase 296 434 9.9E-43 T 05-07-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AC028_RS08445 73c42990cbdb783d18305dbe66b43efe 941 Pfam PF08335 GlnD PII-uridylyltransferase 810 892 1.1E-5 T 05-07-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AC028_RS08445 73c42990cbdb783d18305dbe66b43efe 941 SUPERFAMILY SSF81301 29 285 7.52E-67 T 05-07-2017 AC028_RS08445 73c42990cbdb783d18305dbe66b43efe 941 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 41 275 5.9E-60 T 05-07-2017 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AC028_RS08445 73c42990cbdb783d18305dbe66b43efe 941 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 546 789 8.5E-68 T 05-07-2017 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AC028_RS08445 73c42990cbdb783d18305dbe66b43efe 941 SUPERFAMILY SSF81301 520 796 7.85E-70 T 05-07-2017 AC028_RS08445 73c42990cbdb783d18305dbe66b43efe 941 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 37 936 18.361 T 05-07-2017 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 AC028_RS04895 c55c974e2ff09a632a3266f3a5ddb3aa 238 Gene3D G3DSA:3.60.40.10 5 236 3.3E-47 T 05-07-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AC028_RS04895 c55c974e2ff09a632a3266f3a5ddb3aa 238 SMART SM00332 2 234 2.7E-11 T 05-07-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AC028_RS04895 c55c974e2ff09a632a3266f3a5ddb3aa 238 SMART SM00331 11 236 1.6E-4 T 05-07-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AC028_RS04895 c55c974e2ff09a632a3266f3a5ddb3aa 238 Pfam PF13672 Protein phosphatase 2C 17 198 1.1E-17 T 05-07-2017 AC028_RS04895 c55c974e2ff09a632a3266f3a5ddb3aa 238 SUPERFAMILY SSF81606 5 237 3.4E-49 T 05-07-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AC028_RS04460 943b874509c9958f8aa13623aec0eb44 283 Gene3D G3DSA:3.40.192.10 4 107 8.1E-39 T 05-07-2017 AC028_RS04460 943b874509c9958f8aa13623aec0eb44 283 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 6 273 4.6E-71 T 05-07-2017 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AC028_RS04460 943b874509c9958f8aa13623aec0eb44 283 SUPERFAMILY SSF51735 103 273 7.9E-38 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS04460 943b874509c9958f8aa13623aec0eb44 283 SUPERFAMILY SSF53223 4 102 8.06E-32 T 05-07-2017 AC028_RS04460 943b874509c9958f8aa13623aec0eb44 283 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 113 194 3.4E-12 T 05-07-2017 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AC028_RS04460 943b874509c9958f8aa13623aec0eb44 283 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 8 90 4.7E-25 T 05-07-2017 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AC028_RS04460 943b874509c9958f8aa13623aec0eb44 283 Gene3D G3DSA:3.40.50.720 108 274 2.7E-42 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS04460 943b874509c9958f8aa13623aec0eb44 283 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 3 274 32.748 T 05-07-2017 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AC028_RS05410 0c80ff16b73d3851f4725c841453e1b8 325 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 13 323 7.1E-20 T 05-07-2017 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX AC028_RS03965 3b7d34b6ab66eaaeb1dd59eaeb182658 525 Pfam PF13180 PDZ domain 313 403 2.5E-17 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS03965 3b7d34b6ab66eaaeb1dd59eaeb182658 525 SMART SM00228 312 394 5.7E-12 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS03965 3b7d34b6ab66eaaeb1dd59eaeb182658 525 SMART SM00228 431 514 7.3 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS03965 3b7d34b6ab66eaaeb1dd59eaeb182658 525 PRINTS PR00834 HtrA/DegQ protease family signature 352 364 3.6E-50 T 05-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AC028_RS03965 3b7d34b6ab66eaaeb1dd59eaeb182658 525 PRINTS PR00834 HtrA/DegQ protease family signature 244 261 3.6E-50 T 05-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AC028_RS03965 3b7d34b6ab66eaaeb1dd59eaeb182658 525 PRINTS PR00834 HtrA/DegQ protease family signature 208 232 3.6E-50 T 05-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AC028_RS03965 3b7d34b6ab66eaaeb1dd59eaeb182658 525 PRINTS PR00834 HtrA/DegQ protease family signature 147 159 3.6E-50 T 05-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AC028_RS03965 3b7d34b6ab66eaaeb1dd59eaeb182658 525 PRINTS PR00834 HtrA/DegQ protease family signature 168 188 3.6E-50 T 05-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AC028_RS03965 3b7d34b6ab66eaaeb1dd59eaeb182658 525 PRINTS PR00834 HtrA/DegQ protease family signature 266 283 3.6E-50 T 05-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AC028_RS03965 3b7d34b6ab66eaaeb1dd59eaeb182658 525 SUPERFAMILY SSF50494 51 303 1.13E-64 T 05-07-2017 IPR009003 Peptidase S1, PA clan AC028_RS03965 3b7d34b6ab66eaaeb1dd59eaeb182658 525 SUPERFAMILY SSF50156 432 522 1.15E-6 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS03965 3b7d34b6ab66eaaeb1dd59eaeb182658 525 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 53 520 2.9E-149 T 05-07-2017 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AC028_RS03965 3b7d34b6ab66eaaeb1dd59eaeb182658 525 Gene3D G3DSA:2.40.10.10 53 199 1.7E-37 T 05-07-2017 AC028_RS03965 3b7d34b6ab66eaaeb1dd59eaeb182658 525 Gene3D G3DSA:2.30.42.10 315 409 2.2E-28 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS03965 3b7d34b6ab66eaaeb1dd59eaeb182658 525 Gene3D G3DSA:2.30.42.10 432 522 2.3E-11 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS03965 3b7d34b6ab66eaaeb1dd59eaeb182658 525 SUPERFAMILY SSF50156 270 395 1.58E-23 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS03965 3b7d34b6ab66eaaeb1dd59eaeb182658 525 Pfam PF13365 Trypsin-like peptidase domain 138 273 6.1E-38 T 05-07-2017 AC028_RS03965 3b7d34b6ab66eaaeb1dd59eaeb182658 525 Gene3D G3DSA:2.40.10.10 200 314 3.7E-43 T 05-07-2017 AC028_RS06365 72a0e3d43a69fdfc852f8be1866eef9f 344 Gene3D G3DSA:3.20.20.70 7 316 2.7E-105 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS06365 72a0e3d43a69fdfc852f8be1866eef9f 344 SUPERFAMILY SSF102114 7 316 2.88E-96 T 05-07-2017 AC028_RS06365 72a0e3d43a69fdfc852f8be1866eef9f 344 SMART SM00876 222 314 3.6E-49 T 05-07-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AC028_RS06365 72a0e3d43a69fdfc852f8be1866eef9f 344 PIRSF PIRSF001619 1 320 1.1E-132 T 05-07-2017 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AC028_RS06365 72a0e3d43a69fdfc852f8be1866eef9f 344 Hamap MF_01694 Biotin synthase [bioB]. 7 315 41.902 T 05-07-2017 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AC028_RS06365 72a0e3d43a69fdfc852f8be1866eef9f 344 SMART SM00729 45 257 9.7E-40 T 05-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AC028_RS06365 72a0e3d43a69fdfc852f8be1866eef9f 344 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 222 312 6.1E-20 T 05-07-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AC028_RS06365 72a0e3d43a69fdfc852f8be1866eef9f 344 TIGRFAM TIGR00433 bioB: biotin synthase 16 312 3.9E-123 T 05-07-2017 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AC028_RS06365 72a0e3d43a69fdfc852f8be1866eef9f 344 Pfam PF04055 Radical SAM superfamily 51 205 1.5E-15 T 05-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AC028_RS20945 5d2983482f4adf9cc834b30a7486f989 168 Gene3D G3DSA:3.40.50.620 7 162 1.1E-52 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS20945 5d2983482f4adf9cc834b30a7486f989 168 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 163 35.886 T 05-07-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 AC028_RS20945 5d2983482f4adf9cc834b30a7486f989 168 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 9 64 3.2E-16 T 05-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AC028_RS20945 5d2983482f4adf9cc834b30a7486f989 168 Pfam PF01467 Cytidylyltransferase-like 10 138 4.3E-22 T 05-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AC028_RS20945 5d2983482f4adf9cc834b30a7486f989 168 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 8 160 9.9E-58 T 05-07-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 AC028_RS20945 5d2983482f4adf9cc834b30a7486f989 168 SUPERFAMILY SSF52374 7 161 9.65E-45 T 05-07-2017 AC028_RS20945 5d2983482f4adf9cc834b30a7486f989 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 4.1E-48 T 05-07-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 AC028_RS20945 5d2983482f4adf9cc834b30a7486f989 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 4.1E-48 T 05-07-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 AC028_RS20945 5d2983482f4adf9cc834b30a7486f989 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 4.1E-48 T 05-07-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 AC028_RS20945 5d2983482f4adf9cc834b30a7486f989 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 4.1E-48 T 05-07-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 AC028_RS20945 5d2983482f4adf9cc834b30a7486f989 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 4.1E-48 T 05-07-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 AC028_RS15585 f1f9f9130ccb03c4abf4f04e94491a15 526 Gene3D G3DSA:1.20.1250.20 275 437 3.3E-18 T 05-07-2017 AC028_RS15585 f1f9f9130ccb03c4abf4f04e94491a15 526 Gene3D G3DSA:1.20.1250.20 487 511 3.3E-18 T 05-07-2017 AC028_RS15585 f1f9f9130ccb03c4abf4f04e94491a15 526 PRINTS PR01036 Tetracycline resistance protein TetB signature 32 56 1.6E-5 T 05-07-2017 AC028_RS15585 f1f9f9130ccb03c4abf4f04e94491a15 526 PRINTS PR01036 Tetracycline resistance protein TetB signature 153 177 1.6E-5 T 05-07-2017 AC028_RS15585 f1f9f9130ccb03c4abf4f04e94491a15 526 PRINTS PR01036 Tetracycline resistance protein TetB signature 219 237 1.6E-5 T 05-07-2017 AC028_RS15585 f1f9f9130ccb03c4abf4f04e94491a15 526 Pfam PF07690 Major Facilitator Superfamily 33 427 1.1E-52 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS15585 f1f9f9130ccb03c4abf4f04e94491a15 526 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 29 507 2.4E-155 T 05-07-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AC028_RS15585 f1f9f9130ccb03c4abf4f04e94491a15 526 SUPERFAMILY SSF103473 24 213 1.2E-66 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS15585 f1f9f9130ccb03c4abf4f04e94491a15 526 SUPERFAMILY SSF103473 265 436 1.2E-66 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS15585 f1f9f9130ccb03c4abf4f04e94491a15 526 SUPERFAMILY SSF103473 486 511 1.2E-66 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS15585 f1f9f9130ccb03c4abf4f04e94491a15 526 Gene3D G3DSA:1.20.1250.20 31 213 3.9E-35 T 05-07-2017 AC028_RS04525 7d85f0c07019c14ebb1a552d667dd0c4 757 SUPERFAMILY SSF82171 30 481 7.19E-55 T 05-07-2017 AC028_RS04525 7d85f0c07019c14ebb1a552d667dd0c4 757 SUPERFAMILY SSF53474 501 750 1.56E-73 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS04525 7d85f0c07019c14ebb1a552d667dd0c4 757 Gene3D G3DSA:2.140.10.30 32 480 8.5E-112 T 05-07-2017 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AC028_RS04525 7d85f0c07019c14ebb1a552d667dd0c4 757 Pfam PF00326 Prolyl oligopeptidase family 556 751 4.8E-56 T 05-07-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AC028_RS04525 7d85f0c07019c14ebb1a552d667dd0c4 757 Gene3D G3DSA:3.40.50.1820 500 750 5.9E-86 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS04525 7d85f0c07019c14ebb1a552d667dd0c4 757 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 138 460 4.5E-94 T 05-07-2017 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AC028_RS02580 13abce2f77b0ceecb6c0fcc3844b6f5a 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 123 1.8E-10 T 05-07-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AC028_RS02580 13abce2f77b0ceecb6c0fcc3844b6f5a 130 SUPERFAMILY SSF54593 3 128 4.7E-26 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS02580 13abce2f77b0ceecb6c0fcc3844b6f5a 130 Gene3D G3DSA:3.10.180.10 1 129 1.6E-19 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS11545 2acb28b010bfd28d0dae066b6c3859f8 363 Gene3D G3DSA:1.10.150.300 131 200 1.1E-25 T 05-07-2017 IPR023192 TGS-like domain AC028_RS11545 2acb28b010bfd28d0dae066b6c3859f8 363 Pfam PF01926 50S ribosome-binding GTPase 5 128 6.5E-22 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS11545 2acb28b010bfd28d0dae066b6c3859f8 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 3.3E-37 T 05-07-2017 IPR013029 Domain of unknown function DUF933 AC028_RS11545 2acb28b010bfd28d0dae066b6c3859f8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 5.0E-34 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS11545 2acb28b010bfd28d0dae066b6c3859f8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 5.0E-34 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS11545 2acb28b010bfd28d0dae066b6c3859f8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 5.0E-34 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS11545 2acb28b010bfd28d0dae066b6c3859f8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.0E-34 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS11545 2acb28b010bfd28d0dae066b6c3859f8 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 44.194 T 05-07-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 AC028_RS11545 2acb28b010bfd28d0dae066b6c3859f8 363 PIRSF PIRSF006641 1 363 5.4E-153 T 05-07-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 AC028_RS11545 2acb28b010bfd28d0dae066b6c3859f8 363 SUPERFAMILY SSF52540 3 301 1.33E-82 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11545 2acb28b010bfd28d0dae066b6c3859f8 363 Gene3D G3DSA:3.10.20.30 267 363 4.6E-47 T 05-07-2017 IPR012675 Beta-grasp domain AC028_RS11545 2acb28b010bfd28d0dae066b6c3859f8 363 SUPERFAMILY SSF81271 279 360 2.11E-34 T 05-07-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AC028_RS11545 2acb28b010bfd28d0dae066b6c3859f8 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 5.3E-155 T 05-07-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 AC028_RS11545 2acb28b010bfd28d0dae066b6c3859f8 363 Gene3D G3DSA:3.40.50.300 4 130 1.0E-45 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11545 2acb28b010bfd28d0dae066b6c3859f8 363 Gene3D G3DSA:3.40.50.300 201 266 1.0E-45 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS21050 243c3adf7a7e03b18420c4bc5b33f2d2 779 Gene3D G3DSA:2.140.10.30 59 501 4.4E-65 T 05-07-2017 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AC028_RS21050 243c3adf7a7e03b18420c4bc5b33f2d2 779 Gene3D G3DSA:3.40.50.1820 504 764 4.8E-55 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS21050 243c3adf7a7e03b18420c4bc5b33f2d2 779 SUPERFAMILY SSF82171 177 501 3.4E-34 T 05-07-2017 AC028_RS21050 243c3adf7a7e03b18420c4bc5b33f2d2 779 SUPERFAMILY SSF82171 48 98 3.4E-34 T 05-07-2017 AC028_RS21050 243c3adf7a7e03b18420c4bc5b33f2d2 779 SUPERFAMILY SSF82171 132 140 3.4E-34 T 05-07-2017 AC028_RS21050 243c3adf7a7e03b18420c4bc5b33f2d2 779 SUPERFAMILY SSF53474 504 763 5.26E-51 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS21050 243c3adf7a7e03b18420c4bc5b33f2d2 779 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 175 473 4.0E-66 T 05-07-2017 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AC028_RS21050 243c3adf7a7e03b18420c4bc5b33f2d2 779 Pfam PF00326 Prolyl oligopeptidase family 569 764 5.5E-50 T 05-07-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AC028_RS00775 b74efd7734f4a06aa9df7a7e607bdaaf 199 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 4 199 34.902 T 05-07-2017 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AC028_RS00775 b74efd7734f4a06aa9df7a7e607bdaaf 199 PIRSF PIRSF000190 2 199 1.0E-63 T 05-07-2017 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AC028_RS00775 b74efd7734f4a06aa9df7a7e607bdaaf 199 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 168 181 - T 05-07-2017 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AC028_RS00775 b74efd7734f4a06aa9df7a7e607bdaaf 199 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 197 8.4E-63 T 05-07-2017 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AC028_RS00775 b74efd7734f4a06aa9df7a7e607bdaaf 199 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 2 105 1.8E-27 T 05-07-2017 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AC028_RS00775 b74efd7734f4a06aa9df7a7e607bdaaf 199 Gene3D G3DSA:2.30.110.10 3 199 2.1E-70 T 05-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 AC028_RS00775 b74efd7734f4a06aa9df7a7e607bdaaf 199 SUPERFAMILY SSF50475 2 199 1.22E-55 T 05-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 AC028_RS00775 b74efd7734f4a06aa9df7a7e607bdaaf 199 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 158 199 1.6E-14 T 05-07-2017 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AC028_RS19140 53b7f9945065eb81e16dff0a44e6383f 260 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 171 182 - T 05-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AC028_RS19140 53b7f9945065eb81e16dff0a44e6383f 260 SUPERFAMILY SSF46548 130 257 1.1E-39 T 05-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 AC028_RS19140 53b7f9945065eb81e16dff0a44e6383f 260 Pfam PF13534 4Fe-4S dicluster domain 170 243 2.5E-9 T 05-07-2017 AC028_RS19140 53b7f9945065eb81e16dff0a44e6383f 260 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 28 133 2.1E-33 T 05-07-2017 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AC028_RS19140 53b7f9945065eb81e16dff0a44e6383f 260 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 79 87 - T 05-07-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AC028_RS19140 53b7f9945065eb81e16dff0a44e6383f 260 Gene3D G3DSA:3.10.20.30 21 128 9.6E-44 T 05-07-2017 IPR012675 Beta-grasp domain AC028_RS19140 53b7f9945065eb81e16dff0a44e6383f 260 SUPERFAMILY SSF54292 26 128 4.99E-31 T 05-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AC028_RS19140 53b7f9945065eb81e16dff0a44e6383f 260 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 31 252 3.9E-84 T 05-07-2017 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AC028_RS19140 53b7f9945065eb81e16dff0a44e6383f 260 Gene3D G3DSA:1.10.1060.10 130 257 1.2E-49 T 05-07-2017 AC028_RS06875 3f28b27301133bc9c9aafbebc48adb94 181 SUPERFAMILY SSF52833 3 179 4.22E-57 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS06875 3f28b27301133bc9c9aafbebc48adb94 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 05-07-2017 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AC028_RS06875 3f28b27301133bc9c9aafbebc48adb94 181 Gene3D G3DSA:3.40.30.10 4 180 4.3E-64 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS06875 3f28b27301133bc9c9aafbebc48adb94 181 PRINTS PR01011 Glutathione peroxidase family signature 58 74 1.3E-18 T 05-07-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AC028_RS06875 3f28b27301133bc9c9aafbebc48adb94 181 PRINTS PR01011 Glutathione peroxidase family signature 141 150 1.3E-18 T 05-07-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AC028_RS06875 3f28b27301133bc9c9aafbebc48adb94 181 PRINTS PR01011 Glutathione peroxidase family signature 23 40 1.3E-18 T 05-07-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AC028_RS06875 3f28b27301133bc9c9aafbebc48adb94 181 PIRSF PIRSF000303 1 181 1.8E-61 T 05-07-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AC028_RS06875 3f28b27301133bc9c9aafbebc48adb94 181 Pfam PF00255 Glutathione peroxidase 5 111 5.2E-37 T 05-07-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AC028_RS15235 2277d2f800e976336377f1c23ec2cdb1 243 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 27 42 - T 05-07-2017 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 AC028_RS15235 2277d2f800e976336377f1c23ec2cdb1 243 SMART SM00882 14 226 7.0E-93 T 05-07-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 AC028_RS15235 2277d2f800e976336377f1c23ec2cdb1 243 Pfam PF01144 Coenzyme A transferase 16 225 3.3E-80 T 05-07-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 AC028_RS15235 2277d2f800e976336377f1c23ec2cdb1 243 SUPERFAMILY SSF100950 15 236 5.86E-87 T 05-07-2017 AC028_RS15235 2277d2f800e976336377f1c23ec2cdb1 243 Gene3D G3DSA:3.40.1080.10 12 224 1.4E-99 T 05-07-2017 AC028_RS15235 2277d2f800e976336377f1c23ec2cdb1 243 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 12 225 1.5E-79 T 05-07-2017 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 AC028_RS11725 7cdf57728322e036d4ea46c3006cb413 180 Gene3D G3DSA:3.30.160.20 22 84 3.0E-26 T 05-07-2017 IPR014720 Double-stranded RNA-binding domain AC028_RS11725 7cdf57728322e036d4ea46c3006cb413 180 SUPERFAMILY SSF54768 22 89 1.57E-20 T 05-07-2017 AC028_RS11725 7cdf57728322e036d4ea46c3006cb413 180 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 176 33.995 T 05-07-2017 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AC028_RS11725 7cdf57728322e036d4ea46c3006cb413 180 ProSitePatterns PS00585 Ribosomal protein S5 signature. 41 73 - T 05-07-2017 IPR018192 Ribosomal protein S5, N-terminal, conserved site AC028_RS11725 7cdf57728322e036d4ea46c3006cb413 180 Pfam PF00333 Ribosomal protein S5, N-terminal domain 26 87 3.8E-25 T 05-07-2017 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AC028_RS11725 7cdf57728322e036d4ea46c3006cb413 180 Pfam PF03719 Ribosomal protein S5, C-terminal domain 102 170 4.9E-28 T 05-07-2017 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AC028_RS11725 7cdf57728322e036d4ea46c3006cb413 180 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 24 176 6.4E-64 T 05-07-2017 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AC028_RS11725 7cdf57728322e036d4ea46c3006cb413 180 SUPERFAMILY SSF54211 92 172 9.1E-25 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS11725 7cdf57728322e036d4ea46c3006cb413 180 Gene3D G3DSA:3.30.230.10 90 172 1.3E-30 T 05-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_RS20680 f34c7c49ad0ba212c5ea04a50fa01c5c 414 SUPERFAMILY SSF55073 257 412 5.65E-47 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS20680 f34c7c49ad0ba212c5ea04a50fa01c5c 414 SUPERFAMILY SSF52172 1 120 1.04E-10 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS20680 f34c7c49ad0ba212c5ea04a50fa01c5c 414 Gene3D G3DSA:3.40.50.2300 118 240 2.5E-29 T 05-07-2017 AC028_RS20680 f34c7c49ad0ba212c5ea04a50fa01c5c 414 Gene3D G3DSA:3.40.50.2300 1 117 1.6E-9 T 05-07-2017 AC028_RS20680 f34c7c49ad0ba212c5ea04a50fa01c5c 414 SMART SM00267 241 413 1.4E-52 T 05-07-2017 IPR000160 GGDEF domain AC028_RS20680 f34c7c49ad0ba212c5ea04a50fa01c5c 414 SMART SM00448 121 235 3.6E-27 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS20680 f34c7c49ad0ba212c5ea04a50fa01c5c 414 SUPERFAMILY SSF52172 122 252 1.57E-30 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS20680 f34c7c49ad0ba212c5ea04a50fa01c5c 414 Pfam PF00072 Response regulator receiver domain 124 232 2.2E-20 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS20680 f34c7c49ad0ba212c5ea04a50fa01c5c 414 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 248 412 5.9E-49 T 05-07-2017 IPR000160 GGDEF domain AC028_RS20680 f34c7c49ad0ba212c5ea04a50fa01c5c 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 252 409 2.7E-42 T 05-07-2017 IPR000160 GGDEF domain AC028_RS20680 f34c7c49ad0ba212c5ea04a50fa01c5c 414 Gene3D G3DSA:3.30.70.270 254 412 3.9E-51 T 05-07-2017 AC028_RS16640 e55565a448ca80696285a32142c05eb5 258 Pfam PF01513 ATP-NAD kinase 25 220 1.9E-16 T 05-07-2017 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AC028_RS16640 e55565a448ca80696285a32142c05eb5 258 Gene3D G3DSA:2.60.200.30 113 230 2.2E-28 T 05-07-2017 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AC028_RS16640 e55565a448ca80696285a32142c05eb5 258 Gene3D G3DSA:3.40.50.10330 24 112 5.5E-17 T 05-07-2017 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AC028_RS16640 e55565a448ca80696285a32142c05eb5 258 Hamap MF_00361 NAD kinase [nadK]. 5 257 21.431 T 05-07-2017 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AC028_RS16640 e55565a448ca80696285a32142c05eb5 258 SUPERFAMILY SSF111331 26 245 1.57E-55 T 05-07-2017 IPR016064 NAD kinase/diacylglycerol kinase-like domain AC028_RS17590 3498cb13560588b51a65f2d495bfdca4 305 Gene3D G3DSA:3.10.270.10 4 162 2.0E-77 T 05-07-2017 AC028_RS17590 3498cb13560588b51a65f2d495bfdca4 305 Gene3D G3DSA:3.10.270.10 195 293 2.0E-77 T 05-07-2017 AC028_RS17590 3498cb13560588b51a65f2d495bfdca4 305 Pfam PF02649 Type I GTP cyclohydrolase folE2 5 291 9.1E-70 T 05-07-2017 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442 AC028_RS17590 3498cb13560588b51a65f2d495bfdca4 305 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 5 296 33.367 T 05-07-2017 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442 AC028_RS17670 29698928ab7fc72a5d1dd19a1a056be6 188 SMART SM00448 7 118 1.7E-18 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS17670 29698928ab7fc72a5d1dd19a1a056be6 188 Gene3D G3DSA:1.10.10.60 127 182 1.8E-25 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS17670 29698928ab7fc72a5d1dd19a1a056be6 188 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 147 164 1.8E-9 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS17670 29698928ab7fc72a5d1dd19a1a056be6 188 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 164 184 1.8E-9 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS17670 29698928ab7fc72a5d1dd19a1a056be6 188 SUPERFAMILY SSF46689 90 180 3.99E-16 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS17670 29698928ab7fc72a5d1dd19a1a056be6 188 Gene3D G3DSA:3.40.50.2300 10 120 5.9E-26 T 05-07-2017 AC028_RS17670 29698928ab7fc72a5d1dd19a1a056be6 188 Pfam PF02954 Bacterial regulatory protein, Fis family 147 180 1.1E-12 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS17670 29698928ab7fc72a5d1dd19a1a056be6 188 Pfam PF00072 Response regulator receiver domain 10 117 1.1E-20 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS17670 29698928ab7fc72a5d1dd19a1a056be6 188 SUPERFAMILY SSF52172 10 119 5.83E-28 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS00380 aaf6e3d4d1ba07449bf3431d71338e44 601 PRINTS PR00369 Flavodoxin signature 83 96 9.0E-8 T 05-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AC028_RS00380 aaf6e3d4d1ba07449bf3431d71338e44 601 PRINTS PR00369 Flavodoxin signature 131 142 9.0E-8 T 05-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AC028_RS00380 aaf6e3d4d1ba07449bf3431d71338e44 601 PRINTS PR00369 Flavodoxin signature 163 173 9.0E-8 T 05-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AC028_RS00380 aaf6e3d4d1ba07449bf3431d71338e44 601 PRINTS PR00369 Flavodoxin signature 187 206 9.0E-8 T 05-07-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AC028_RS00380 aaf6e3d4d1ba07449bf3431d71338e44 601 Pfam PF00175 Oxidoreductase NAD-binding domain 469 574 1.1E-11 T 05-07-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AC028_RS00380 aaf6e3d4d1ba07449bf3431d71338e44 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 404 411 6.4E-9 T 05-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AC028_RS00380 aaf6e3d4d1ba07449bf3431d71338e44 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 560 568 6.4E-9 T 05-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AC028_RS00380 aaf6e3d4d1ba07449bf3431d71338e44 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 505 516 6.4E-9 T 05-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AC028_RS00380 aaf6e3d4d1ba07449bf3431d71338e44 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 492 501 6.4E-9 T 05-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AC028_RS00380 aaf6e3d4d1ba07449bf3431d71338e44 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 468 487 6.4E-9 T 05-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AC028_RS00380 aaf6e3d4d1ba07449bf3431d71338e44 601 SUPERFAMILY SSF52218 81 223 6.58E-37 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS00380 aaf6e3d4d1ba07449bf3431d71338e44 601 Gene3D G3DSA:3.40.50.360 79 222 7.4E-38 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS00380 aaf6e3d4d1ba07449bf3431d71338e44 601 Gene3D G3DSA:2.40.30.10 401 450 5.3E-6 T 05-07-2017 AC028_RS00380 aaf6e3d4d1ba07449bf3431d71338e44 601 SUPERFAMILY SSF52343 458 601 3.8E-35 T 05-07-2017 AC028_RS00380 aaf6e3d4d1ba07449bf3431d71338e44 601 Gene3D G3DSA:3.40.50.80 459 601 2.4E-36 T 05-07-2017 AC028_RS00380 aaf6e3d4d1ba07449bf3431d71338e44 601 SUPERFAMILY SSF63380 230 459 3.97E-15 T 05-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AC028_RS00380 aaf6e3d4d1ba07449bf3431d71338e44 601 Pfam PF00258 Flavodoxin 85 213 8.3E-27 T 05-07-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AC028_RS00880 f95befe2fb466d3929343841cd955e51 405 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 05-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AC028_RS00880 f95befe2fb466d3929343841cd955e51 405 PIRSF PIRSF001434 3 392 5.4E-134 T 05-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AC028_RS00880 f95befe2fb466d3929343841cd955e51 405 Gene3D G3DSA:3.40.640.10 14 254 2.8E-84 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS00880 f95befe2fb466d3929343841cd955e51 405 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 13 389 1.9E-178 T 05-07-2017 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48 AC028_RS00880 f95befe2fb466d3929343841cd955e51 405 SUPERFAMILY SSF53383 19 389 5.23E-117 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS00880 f95befe2fb466d3929343841cd955e51 405 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 14 388 1.1E-134 T 05-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AC028_RS00880 f95befe2fb466d3929343841cd955e51 405 Gene3D G3DSA:3.90.1150.10 256 391 1.1E-50 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS19770 57f091f3f81173b2bac35112d4fb8dd7 294 Pfam PF00795 Carbon-nitrogen hydrolase 8 271 8.1E-57 T 05-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AC028_RS19770 57f091f3f81173b2bac35112d4fb8dd7 294 Gene3D G3DSA:3.60.110.10 8 290 7.9E-102 T 05-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AC028_RS19770 57f091f3f81173b2bac35112d4fb8dd7 294 SUPERFAMILY SSF56317 7 291 6.28E-88 T 05-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 Gene3D G3DSA:1.10.287.610 5 67 1.1E-25 T 05-07-2017 AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 Pfam PF12826 Helix-hairpin-helix motif 577 640 1.4E-13 T 05-07-2017 AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 SUPERFAMILY SSF47781 558 650 2.59E-50 T 05-07-2017 IPR010994 RuvA domain 2-like AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 SUPERFAMILY SSF47781 406 492 2.59E-50 T 05-07-2017 IPR010994 RuvA domain 2-like AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 9 320 4.0E-121 T 05-07-2017 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 SUPERFAMILY SSF56091 7 318 1.39E-113 T 05-07-2017 AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 SMART SM00292 752 829 1.5E-10 T 05-07-2017 IPR001357 BRCT domain AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 Gene3D G3DSA:1.10.150.20 437 488 1.3E-19 T 05-07-2017 AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 Gene3D G3DSA:1.10.150.20 554 570 1.3E-19 T 05-07-2017 AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 409 436 9.2E-12 T 05-07-2017 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 SUPERFAMILY SSF50249 320 402 2.4E-26 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 Gene3D G3DSA:2.40.50.140 321 393 1.3E-32 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 753 822 3.9E-12 T 05-07-2017 IPR001357 BRCT domain AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 Gene3D G3DSA:3.30.470.30 121 254 1.5E-50 T 05-07-2017 AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 Gene3D G3DSA:1.10.150.20 571 650 1.1E-24 T 05-07-2017 AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 Gene3D G3DSA:1.10.150.20 665 732 4.6E-6 T 05-07-2017 AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 324 399 2.6E-33 T 05-07-2017 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 SMART SM00532 6 450 2.2E-251 T 05-07-2017 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 14 492 4.9E-189 T 05-07-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 SUPERFAMILY SSF47781 664 733 1.94E-6 T 05-07-2017 IPR010994 RuvA domain 2-like AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 Hamap MF_01588 DNA ligase [ligA]. 5 826 52.062 T 05-07-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 SUPERFAMILY SSF52113 752 823 4.11E-17 T 05-07-2017 IPR001357 BRCT domain AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 117 146 - T 05-07-2017 IPR018239 NAD-dependent DNA ligase, active site AC028_RS16825 639dde464ef3fe78069847e6253225ee 833 Gene3D G3DSA:3.40.50.10190 753 826 4.6E-23 T 05-07-2017 IPR001357 BRCT domain AC028_RS19875 4c6ad896df9c10ae6264889b13e3f3d8 231 Pfam PF03379 CcmB protein 15 228 2.0E-62 T 05-07-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19875 4c6ad896df9c10ae6264889b13e3f3d8 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 112 130 2.1E-49 T 05-07-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19875 4c6ad896df9c10ae6264889b13e3f3d8 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 87 110 2.1E-49 T 05-07-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19875 4c6ad896df9c10ae6264889b13e3f3d8 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 64 81 2.1E-49 T 05-07-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19875 4c6ad896df9c10ae6264889b13e3f3d8 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 204 227 2.1E-49 T 05-07-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19875 4c6ad896df9c10ae6264889b13e3f3d8 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 167 186 2.1E-49 T 05-07-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19875 4c6ad896df9c10ae6264889b13e3f3d8 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 38 59 2.1E-49 T 05-07-2017 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19875 4c6ad896df9c10ae6264889b13e3f3d8 231 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 17 227 1.6E-58 T 05-07-2017 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AC028_RS19875 4c6ad896df9c10ae6264889b13e3f3d8 231 PIRSF PIRSF002764 7 231 1.5E-77 T 05-07-2017 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AC028_RS01175 8bebaf90dafdb0d68b4668583509f8ed 176 SUPERFAMILY SSF50341 28 169 3.53E-25 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS01175 8bebaf90dafdb0d68b4668583509f8ed 176 Pfam PF01584 CheW-like domain 35 153 2.1E-24 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS01175 8bebaf90dafdb0d68b4668583509f8ed 176 Gene3D G3DSA:2.40.50.180 72 115 2.6E-4 T 05-07-2017 AC028_RS01175 8bebaf90dafdb0d68b4668583509f8ed 176 SMART SM00260 29 166 1.2E-5 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS01870 b2e012ea17f28f33a753688938772b12 578 SUPERFAMILY SSF160246 11 148 2.88E-33 T 05-07-2017 AC028_RS01870 b2e012ea17f28f33a753688938772b12 578 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 396 410 - T 05-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AC028_RS01870 b2e012ea17f28f33a753688938772b12 578 Gene3D G3DSA:3.40.50.300 308 577 1.2E-95 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01870 b2e012ea17f28f33a753688938772b12 578 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 49 153 8.9E-20 T 05-07-2017 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 AC028_RS01870 b2e012ea17f28f33a753688938772b12 578 Gene3D G3DSA:3.30.450.90 187 301 1.1E-50 T 05-07-2017 AC028_RS01870 b2e012ea17f28f33a753688938772b12 578 Pfam PF00437 Type II/IV secretion system protein 202 468 7.1E-85 T 05-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AC028_RS01870 b2e012ea17f28f33a753688938772b12 578 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 15 578 1.2E-267 T 05-07-2017 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 AC028_RS01870 b2e012ea17f28f33a753688938772b12 578 SUPERFAMILY SSF52540 190 576 2.88E-97 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18135 38fe22074f097656882517a4e3d33c3f 753 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 501 694 1.4E-61 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18135 38fe22074f097656882517a4e3d33c3f 753 SMART SM00283 448 695 2.2E-86 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18135 38fe22074f097656882517a4e3d33c3f 753 SUPERFAMILY SSF58104 415 697 1.57E-71 T 05-07-2017 AC028_RS18135 38fe22074f097656882517a4e3d33c3f 753 Pfam PF00672 HAMP domain 195 262 2.8E-16 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18135 38fe22074f097656882517a4e3d33c3f 753 SUPERFAMILY SSF158472 214 265 3.01E-10 T 05-07-2017 AC028_RS18135 38fe22074f097656882517a4e3d33c3f 753 Gene3D G3DSA:1.10.287.950 463 667 3.2E-62 T 05-07-2017 AC028_RS18135 38fe22074f097656882517a4e3d33c3f 753 Pfam PF12729 Four helix bundle sensory module for signal transduction 9 182 1.8E-18 T 05-07-2017 IPR024478 4HB MCP domain AC028_RS18135 38fe22074f097656882517a4e3d33c3f 753 SUPERFAMILY SSF58104 234 268 4.97E-5 T 05-07-2017 AC028_RS18135 38fe22074f097656882517a4e3d33c3f 753 SUPERFAMILY SSF58104 324 394 4.97E-5 T 05-07-2017 AC028_RS18135 38fe22074f097656882517a4e3d33c3f 753 SMART SM00304 214 266 9.2E-11 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18135 38fe22074f097656882517a4e3d33c3f 753 SMART SM00304 395 447 22.0 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS22210 ffca8f7eac29bfe007ab279f14b79880 482 SMART SM00387 372 482 2.7E-24 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS22210 ffca8f7eac29bfe007ab279f14b79880 482 SUPERFAMILY SSF47384 251 322 6.67E-12 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS22210 ffca8f7eac29bfe007ab279f14b79880 482 SMART SM00388 258 323 1.4E-11 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS22210 ffca8f7eac29bfe007ab279f14b79880 482 Gene3D G3DSA:1.10.287.130 260 318 8.0E-10 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS22210 ffca8f7eac29bfe007ab279f14b79880 482 SUPERFAMILY SSF55874 312 481 1.3E-35 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS22210 ffca8f7eac29bfe007ab279f14b79880 482 SMART SM00304 207 258 1.3E-6 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS22210 ffca8f7eac29bfe007ab279f14b79880 482 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 480 1.4E-16 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS22210 ffca8f7eac29bfe007ab279f14b79880 482 SUPERFAMILY SSF103190 79 180 3.81E-8 T 05-07-2017 IPR029151 Periplasmic sensor domain-like AC028_RS22210 ffca8f7eac29bfe007ab279f14b79880 482 Pfam PF00672 HAMP domain 194 254 5.4E-12 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS22210 ffca8f7eac29bfe007ab279f14b79880 482 Gene3D G3DSA:3.30.565.10 329 481 9.7E-35 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS22210 ffca8f7eac29bfe007ab279f14b79880 482 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 321 1.6E-10 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS22210 ffca8f7eac29bfe007ab279f14b79880 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 461 3.7E-9 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS22210 ffca8f7eac29bfe007ab279f14b79880 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 3.7E-9 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS22210 ffca8f7eac29bfe007ab279f14b79880 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 437 3.7E-9 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS22210 ffca8f7eac29bfe007ab279f14b79880 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 480 3.7E-9 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS13755 54bfac911c8219bf6d05d6f0157ad669 117 Gene3D G3DSA:1.10.238.10 58 106 2.2E-8 T 05-07-2017 IPR011992 EF-hand domain pair AC028_RS13755 54bfac911c8219bf6d05d6f0157ad669 117 Pfam PF13202 EF hand 60 72 0.016 T 05-07-2017 IPR002048 EF-hand domain GO:0005509 AC028_RS13755 54bfac911c8219bf6d05d6f0157ad669 117 Pfam PF13202 EF hand 80 103 1.0E-4 T 05-07-2017 IPR002048 EF-hand domain GO:0005509 AC028_RS13755 54bfac911c8219bf6d05d6f0157ad669 117 ProSitePatterns PS00018 EF-hand calcium-binding domain. 87 99 - T 05-07-2017 IPR018247 EF-Hand 1, calcium-binding site AC028_RS13755 54bfac911c8219bf6d05d6f0157ad669 117 SUPERFAMILY SSF47473 55 105 3.53E-8 T 05-07-2017 IPR011992 EF-hand domain pair AC028_RS11575 3568b3c514d4996b8e9b06f13ee07783 135 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 80 133 6.0E-21 T 05-07-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AC028_RS11575 3568b3c514d4996b8e9b06f13ee07783 135 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 81 109 - T 05-07-2017 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AC028_RS11575 3568b3c514d4996b8e9b06f13ee07783 135 Hamap MF_00422 Protein translocase subunit SecE [secE]. 76 131 12.419 T 05-07-2017 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AC028_RS11575 3568b3c514d4996b8e9b06f13ee07783 135 PRINTS PR01650 Bacterial translocase SecE signature 99 119 4.1E-15 T 05-07-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AC028_RS11575 3568b3c514d4996b8e9b06f13ee07783 135 PRINTS PR01650 Bacterial translocase SecE signature 75 95 4.1E-15 T 05-07-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AC028_RS11575 3568b3c514d4996b8e9b06f13ee07783 135 PRINTS PR01650 Bacterial translocase SecE signature 54 75 4.1E-15 T 05-07-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AC028_RS11575 3568b3c514d4996b8e9b06f13ee07783 135 Gene3D G3DSA:1.20.5.1030 75 133 1.2E-23 T 05-07-2017 AC028_RS11575 3568b3c514d4996b8e9b06f13ee07783 135 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 80 132 2.2E-19 T 05-07-2017 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AC028_RS02435 79205351b6af4d32173fb89c0f753805 609 Pfam PF13519 von Willebrand factor type A domain 102 209 1.0E-11 T 05-07-2017 IPR002035 von Willebrand factor, type A AC028_RS02435 79205351b6af4d32173fb89c0f753805 609 Gene3D G3DSA:3.40.50.410 100 236 4.7E-10 T 05-07-2017 IPR002035 von Willebrand factor, type A AC028_RS02435 79205351b6af4d32173fb89c0f753805 609 SMART SM00028 389 422 3.8E-6 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS02435 79205351b6af4d32173fb89c0f753805 609 SMART SM00327 99 288 9.5E-11 T 05-07-2017 IPR002035 von Willebrand factor, type A AC028_RS02435 79205351b6af4d32173fb89c0f753805 609 Pfam PF00515 Tetratricopeptide repeat 391 421 6.4E-9 T 05-07-2017 IPR001440 Tetratricopeptide repeat 1 GO:0005515 AC028_RS02435 79205351b6af4d32173fb89c0f753805 609 SUPERFAMILY SSF48452 363 438 1.43E-10 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS02435 79205351b6af4d32173fb89c0f753805 609 SUPERFAMILY SSF53300 99 276 7.6E-20 T 05-07-2017 IPR002035 von Willebrand factor, type A AC028_RS02435 79205351b6af4d32173fb89c0f753805 609 Gene3D G3DSA:1.25.40.10 362 441 4.9E-12 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS10270 5df4d7a9a19eccac767c75b444978098 240 SUPERFAMILY SSF46785 7 79 2.55E-22 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS10270 5df4d7a9a19eccac767c75b444978098 240 SMART SM00345 18 77 1.9E-19 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS10270 5df4d7a9a19eccac767c75b444978098 240 Pfam PF07702 UTRA domain 99 232 1.9E-32 T 05-07-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AC028_RS10270 5df4d7a9a19eccac767c75b444978098 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 77 1.6E-19 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS10270 5df4d7a9a19eccac767c75b444978098 240 SMART SM00866 97 233 1.6E-27 T 05-07-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AC028_RS10270 5df4d7a9a19eccac767c75b444978098 240 Gene3D G3DSA:1.10.10.10 7 72 4.4E-28 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS10270 5df4d7a9a19eccac767c75b444978098 240 Gene3D G3DSA:3.40.1410.10 73 239 4.6E-40 T 05-07-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AC028_RS10270 5df4d7a9a19eccac767c75b444978098 240 SUPERFAMILY SSF64288 65 240 3.14E-42 T 05-07-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AC028_RS10270 5df4d7a9a19eccac767c75b444978098 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.2E-9 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS10270 5df4d7a9a19eccac767c75b444978098 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.2E-9 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS17625 a6405d8478698951873150b7ee9a5b99 504 Gene3D G3DSA:3.40.50.10490 5 92 2.6E-100 T 05-07-2017 AC028_RS17625 a6405d8478698951873150b7ee9a5b99 504 Gene3D G3DSA:3.40.50.10490 271 465 2.6E-100 T 05-07-2017 AC028_RS17625 a6405d8478698951873150b7ee9a5b99 504 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 40 483 37.715 T 05-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS17625 a6405d8478698951873150b7ee9a5b99 504 Gene3D G3DSA:3.40.50.10490 108 269 1.0E-49 T 05-07-2017 AC028_RS17625 a6405d8478698951873150b7ee9a5b99 504 SUPERFAMILY SSF53697 2 501 3.34E-152 T 05-07-2017 AC028_RS17625 a6405d8478698951873150b7ee9a5b99 504 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 243 256 - T 05-07-2017 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS17625 a6405d8478698951873150b7ee9a5b99 504 Gene3D G3DSA:1.10.1390.10 466 503 2.1E-13 T 05-07-2017 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS17625 a6405d8478698951873150b7ee9a5b99 504 Pfam PF00342 Phosphoglucose isomerase 47 487 9.6E-150 T 05-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS17625 a6405d8478698951873150b7ee9a5b99 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 316 337 7.0E-46 T 05-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS17625 a6405d8478698951873150b7ee9a5b99 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 424 442 7.0E-46 T 05-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS17625 a6405d8478698951873150b7ee9a5b99 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 456 469 7.0E-46 T 05-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS17625 a6405d8478698951873150b7ee9a5b99 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 134 153 7.0E-46 T 05-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS17625 a6405d8478698951873150b7ee9a5b99 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 239 257 7.0E-46 T 05-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS17625 a6405d8478698951873150b7ee9a5b99 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 442 456 7.0E-46 T 05-07-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS17625 a6405d8478698951873150b7ee9a5b99 504 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 456 473 - T 05-07-2017 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS15450 cc2914e0f985885fc360235696169509 185 Pfam PF01765 Ribosome recycling factor 20 183 1.4E-61 T 05-07-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AC028_RS15450 cc2914e0f985885fc360235696169509 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.862 T 05-07-2017 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AC028_RS15450 cc2914e0f985885fc360235696169509 185 Gene3D G3DSA:1.10.132.20 66 185 2.4E-43 T 05-07-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AC028_RS15450 cc2914e0f985885fc360235696169509 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 2.4E-70 T 05-07-2017 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AC028_RS15450 cc2914e0f985885fc360235696169509 185 SUPERFAMILY SSF55194 1 185 5.76E-68 T 05-07-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AC028_RS21095 9475b88a145fd254432ee7c6ba13e36e 425 SUPERFAMILY SSF51905 59 265 1.55E-48 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21095 9475b88a145fd254432ee7c6ba13e36e 425 SUPERFAMILY SSF51905 362 418 1.55E-48 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21095 9475b88a145fd254432ee7c6ba13e36e 425 Pfam PF01266 FAD dependent oxidoreductase 60 400 1.4E-56 T 05-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AC028_RS21095 9475b88a145fd254432ee7c6ba13e36e 425 SUPERFAMILY SSF54373 261 361 2.49E-14 T 05-07-2017 AC028_RS21095 9475b88a145fd254432ee7c6ba13e36e 425 Gene3D G3DSA:3.50.50.60 191 262 1.9E-44 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21095 9475b88a145fd254432ee7c6ba13e36e 425 Gene3D G3DSA:3.50.50.60 55 135 1.9E-44 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21095 9475b88a145fd254432ee7c6ba13e36e 425 Gene3D G3DSA:3.50.50.60 362 420 1.9E-44 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21095 9475b88a145fd254432ee7c6ba13e36e 425 Gene3D G3DSA:3.30.9.10 137 190 1.9E-14 T 05-07-2017 AC028_RS21095 9475b88a145fd254432ee7c6ba13e36e 425 Gene3D G3DSA:3.30.9.10 263 361 1.9E-14 T 05-07-2017 AC028_RS04890 039c3a8d1cbdc99c2e0f5d854870fe04 1176 Pfam PF03781 Sulfatase-modifying factor enzyme 1 1004 1173 4.8E-17 T 05-07-2017 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AC028_RS04890 039c3a8d1cbdc99c2e0f5d854870fe04 1176 SUPERFAMILY SSF56436 1004 1175 7.3E-27 T 05-07-2017 IPR016187 C-type lectin fold AC028_RS04890 039c3a8d1cbdc99c2e0f5d854870fe04 1176 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 309 321 - T 05-07-2017 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AC028_RS04890 039c3a8d1cbdc99c2e0f5d854870fe04 1176 Gene3D G3DSA:3.90.1580.10 1004 1175 6.1E-24 T 05-07-2017 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AC028_RS04890 039c3a8d1cbdc99c2e0f5d854870fe04 1176 SUPERFAMILY SSF56112 179 453 4.45E-56 T 05-07-2017 IPR011009 Protein kinase-like domain AC028_RS04890 039c3a8d1cbdc99c2e0f5d854870fe04 1176 Gene3D G3DSA:1.10.510.10 255 408 8.3E-35 T 05-07-2017 AC028_RS04890 039c3a8d1cbdc99c2e0f5d854870fe04 1176 Pfam PF00069 Protein kinase domain 182 399 2.5E-35 T 05-07-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AC028_RS04890 039c3a8d1cbdc99c2e0f5d854870fe04 1176 Gene3D G3DSA:3.30.200.20 175 254 1.9E-19 T 05-07-2017 AC028_RS04890 039c3a8d1cbdc99c2e0f5d854870fe04 1176 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 188 217 - T 05-07-2017 IPR017441 Protein kinase, ATP binding site GO:0005524 AC028_RS12535 04ae9262b5e2b41898e3f14980c68870 1059 Pfam PF04851 Type III restriction enzyme, res subunit 288 464 1.1E-13 T 05-07-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AC028_RS12535 04ae9262b5e2b41898e3f14980c68870 1059 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 7 717 7.1E-173 T 05-07-2017 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 AC028_RS12535 04ae9262b5e2b41898e3f14980c68870 1059 SMART SM00487 263 497 0.0012 T 05-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_RS12535 04ae9262b5e2b41898e3f14980c68870 1059 SUPERFAMILY SSF52540 226 504 2.66E-22 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12535 04ae9262b5e2b41898e3f14980c68870 1059 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 4 211 2.0E-42 T 05-07-2017 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AC028_RS12535 04ae9262b5e2b41898e3f14980c68870 1059 Pfam PF11867 Domain of unknown function (DUF3387) 716 1054 1.6E-120 T 05-07-2017 IPR021810 Protein of unknown function DUF3387 AC028_RS12535 04ae9262b5e2b41898e3f14980c68870 1059 Gene3D G3DSA:3.40.50.300 270 469 4.8E-14 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS09090 21d1ed2001d7e9b2c1ae1ef57a65fd4b 2817 Gene3D G3DSA:1.25.10.10 289 422 5.2E-4 T 05-07-2017 IPR011989 Armadillo-like helical AC028_RS09090 21d1ed2001d7e9b2c1ae1ef57a65fd4b 2817 Gene3D G3DSA:1.25.10.10 961 1361 3.9E-15 T 05-07-2017 IPR011989 Armadillo-like helical AC028_RS09090 21d1ed2001d7e9b2c1ae1ef57a65fd4b 2817 Gene3D G3DSA:1.25.10.10 443 882 4.8E-14 T 05-07-2017 IPR011989 Armadillo-like helical AC028_RS09090 21d1ed2001d7e9b2c1ae1ef57a65fd4b 2817 SUPERFAMILY SSF48371 932 1288 5.76E-25 T 05-07-2017 IPR016024 Armadillo-type fold GO:0005488 AC028_RS09090 21d1ed2001d7e9b2c1ae1ef57a65fd4b 2817 SUPERFAMILY SSF48371 325 675 1.46E-27 T 05-07-2017 IPR016024 Armadillo-type fold GO:0005488 AC028_RS09090 21d1ed2001d7e9b2c1ae1ef57a65fd4b 2817 SUPERFAMILY SSF48371 618 969 1.34E-20 T 05-07-2017 IPR016024 Armadillo-type fold GO:0005488 AC028_RS17325 9f5ceec3085c703394171364eca85984 210 SUPERFAMILY SSF53335 28 204 2.25E-39 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS17325 9f5ceec3085c703394171364eca85984 210 Pfam PF01728 FtsJ-like methyltransferase 30 204 1.3E-49 T 05-07-2017 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AC028_RS17325 9f5ceec3085c703394171364eca85984 210 PIRSF PIRSF005461 1 210 1.0E-70 T 05-07-2017 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AC028_RS17325 9f5ceec3085c703394171364eca85984 210 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 9 205 27.396 T 05-07-2017 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AC028_RS17325 9f5ceec3085c703394171364eca85984 210 Gene3D G3DSA:3.40.50.150 4 206 6.4E-68 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS12900 b091adab054a006a786aad0737ff7e31 224 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 52 193 3.7E-13 T 05-07-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AC028_RS12900 b091adab054a006a786aad0737ff7e31 224 SUPERFAMILY SSF48150 38 208 8.55E-37 T 05-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AC028_RS12900 b091adab054a006a786aad0737ff7e31 224 Gene3D G3DSA:1.10.340.30 48 157 1.1E-23 T 05-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AC028_RS12900 b091adab054a006a786aad0737ff7e31 224 Gene3D G3DSA:1.10.1670.10 158 212 1.6E-17 T 05-07-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AC028_RS12900 b091adab054a006a786aad0737ff7e31 224 SMART SM00478 55 210 1.7E-10 T 05-07-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AC028_RS06130 4fe56e3f8fef2b8890bcac7e6011bbbc 120 SUPERFAMILY SSF161084 7 115 9.68E-12 T 05-07-2017 AC028_RS06130 4fe56e3f8fef2b8890bcac7e6011bbbc 120 Gene3D G3DSA:1.20.120.550 32 115 3.9E-8 T 05-07-2017 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain AC028_RS06130 4fe56e3f8fef2b8890bcac7e6011bbbc 120 Pfam PF01124 MAPEG family 4 109 8.1E-8 T 05-07-2017 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AC028_RS07800 133d8b9f2494650f84d060e2cb439ec7 821 Pfam PF12607 Protein of unknown function (DUF3772) 134 195 5.5E-16 T 05-07-2017 IPR022249 Domain of unknown function DUF3772 AC028_RS07800 133d8b9f2494650f84d060e2cb439ec7 821 SUPERFAMILY SSF50182 638 702 4.25E-15 T 05-07-2017 IPR010920 LSM domain AC028_RS07800 133d8b9f2494650f84d060e2cb439ec7 821 Gene3D G3DSA:2.30.30.60 652 700 3.4E-15 T 05-07-2017 AC028_RS07800 133d8b9f2494650f84d060e2cb439ec7 821 Gene3D G3DSA:3.30.70.100 706 791 9.2E-13 T 05-07-2017 AC028_RS07800 133d8b9f2494650f84d060e2cb439ec7 821 SUPERFAMILY SSF82689 704 797 1.09E-14 T 05-07-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AC028_RS07800 133d8b9f2494650f84d060e2cb439ec7 821 Pfam PF00924 Mechanosensitive ion channel 594 790 9.2E-44 T 05-07-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AC028_RS07800 133d8b9f2494650f84d060e2cb439ec7 821 SUPERFAMILY SSF82861 553 635 7.19E-12 T 05-07-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AC028_RS09970 cddbf4995daacde7ceb58389757b8334 348 Pfam PF10282 Lactonase, 7-bladed beta-propeller 129 199 9.0E-6 T 05-07-2017 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31 AC028_RS09970 cddbf4995daacde7ceb58389757b8334 348 Pfam PF10282 Lactonase, 7-bladed beta-propeller 212 325 7.3E-11 T 05-07-2017 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31 AC028_RS09970 cddbf4995daacde7ceb58389757b8334 348 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 265 301 6.9E-11 T 05-07-2017 IPR011964 YVTN beta-propeller repeat AC028_RS09970 cddbf4995daacde7ceb58389757b8334 348 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 306 346 4.0E-16 T 05-07-2017 IPR011964 YVTN beta-propeller repeat AC028_RS09970 cddbf4995daacde7ceb58389757b8334 348 SUPERFAMILY SSF50974 39 346 1.36E-68 T 05-07-2017 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 AC028_RS09970 cddbf4995daacde7ceb58389757b8334 348 Gene3D G3DSA:2.130.10.10 47 346 1.2E-62 T 05-07-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AC028_RS05305 29665244974c31fee0b749f0c5eb3cd8 267 Gene3D G3DSA:3.40.1130.10 90 199 1.3E-8 T 05-07-2017 AC028_RS05305 29665244974c31fee0b749f0c5eb3cd8 267 Pfam PF01553 Acyltransferase 89 199 8.4E-21 T 05-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AC028_RS05305 29665244974c31fee0b749f0c5eb3cd8 267 SMART SM00563 90 202 5.1E-25 T 05-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AC028_RS05305 29665244974c31fee0b749f0c5eb3cd8 267 SUPERFAMILY SSF69593 25 216 3.92E-22 T 05-07-2017 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 SUPERFAMILY SSF82693 277 333 1.26E-26 T 05-07-2017 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 SUPERFAMILY SSF82693 139 184 1.26E-26 T 05-07-2017 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 Gene3D G3DSA:3.30.70.1430 579 677 8.2E-26 T 05-07-2017 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 SUPERFAMILY SSF82866 813 1038 3.53E-44 T 05-07-2017 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 SUPERFAMILY SSF82714 185 275 4.19E-22 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 Gene3D G3DSA:1.20.1640.10 858 1041 4.5E-46 T 05-07-2017 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 Pfam PF00873 AcrB/AcrD/AcrF family 3 1034 0.0 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1051 0.0 T 05-07-2017 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 Gene3D G3DSA:3.30.2090.10 184 278 5.1E-29 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 Gene3D G3DSA:3.30.2090.10 729 817 1.8E-20 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 2.6E-92 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.6E-92 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 PRINTS PR00702 Acriflavin resistance protein family signature 631 645 2.6E-92 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 2.6E-92 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.6E-92 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 2.6E-92 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 2.6E-92 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 2.6E-92 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 2.6E-92 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 SUPERFAMILY SSF82714 729 815 2.88E-19 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 SUPERFAMILY SSF82866 299 499 3.4E-51 T 05-07-2017 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 SUPERFAMILY SSF82693 41 134 2.96E-28 T 05-07-2017 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 Gene3D G3DSA:1.10.3850.10 284 500 4.3E-62 T 05-07-2017 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 Gene3D G3DSA:3.30.70.1430 41 141 1.6E-33 T 05-07-2017 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 Gene3D G3DSA:3.30.70.1440 824 857 3.5E-15 T 05-07-2017 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 Gene3D G3DSA:3.30.70.1440 679 727 3.5E-15 T 05-07-2017 AC028_RS15785 c2b5930407b241bf50c16008e6125e54 1058 SUPERFAMILY SSF82693 575 678 1.57E-24 T 05-07-2017 AC028_RS03885 4a7f470e18c75cc7b5b654b4af364fa7 68 SMART SM00357 3 67 8.4E-31 T 05-07-2017 IPR011129 Cold shock protein GO:0003676 AC028_RS03885 4a7f470e18c75cc7b5b654b4af364fa7 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.5E-31 T 05-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AC028_RS03885 4a7f470e18c75cc7b5b654b4af364fa7 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 05-07-2017 IPR019844 Cold-shock conserved site AC028_RS03885 4a7f470e18c75cc7b5b654b4af364fa7 68 PRINTS PR00050 Cold shock protein signature 4 19 1.1E-17 T 05-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AC028_RS03885 4a7f470e18c75cc7b5b654b4af364fa7 68 PRINTS PR00050 Cold shock protein signature 25 34 1.1E-17 T 05-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AC028_RS03885 4a7f470e18c75cc7b5b654b4af364fa7 68 PRINTS PR00050 Cold shock protein signature 40 58 1.1E-17 T 05-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AC028_RS03885 4a7f470e18c75cc7b5b654b4af364fa7 68 Gene3D G3DSA:2.40.50.140 1 65 1.9E-31 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS03885 4a7f470e18c75cc7b5b654b4af364fa7 68 SUPERFAMILY SSF50249 1 67 3.86E-25 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS03885 4a7f470e18c75cc7b5b654b4af364fa7 68 PIRSF PIRSF002599 1 68 6.2E-25 T 05-07-2017 IPR012156 Cold shock, CspA GO:0003676 AC028_RS17620 5e93c4ace4c5c2d4163a354c6120af3c 126 Gene3D G3DSA:2.40.40.20 1 124 5.4E-52 T 05-07-2017 AC028_RS17620 5e93c4ace4c5c2d4163a354c6120af3c 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 67.888 T 05-07-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AC028_RS17620 5e93c4ace4c5c2d4163a354c6120af3c 126 SUPERFAMILY SSF50692 1 121 3.85E-46 T 05-07-2017 IPR009010 Aspartate decarboxylase-like domain AC028_RS17620 5e93c4ace4c5c2d4163a354c6120af3c 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 125 9.5E-49 T 05-07-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AC028_RS17620 5e93c4ace4c5c2d4163a354c6120af3c 126 Pfam PF02261 Aspartate decarboxylase 1 114 2.0E-47 T 05-07-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AC028_RS17620 5e93c4ace4c5c2d4163a354c6120af3c 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 122 2.0E-64 T 05-07-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AC028_RS17620 5e93c4ace4c5c2d4163a354c6120af3c 126 PIRSF PIRSF006246 1 126 4.2E-48 T 05-07-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AC028_RS14620 6c174a26a51f3007b0d11f9d90d1b9b3 366 SUPERFAMILY SSF50621 227 357 2.37E-45 T 05-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AC028_RS14620 6c174a26a51f3007b0d11f9d90d1b9b3 366 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 05-07-2017 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AC028_RS14620 6c174a26a51f3007b0d11f9d90d1b9b3 366 Hamap MF_01201 Alanine racemase. 1 355 34.739 T 05-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AC028_RS14620 6c174a26a51f3007b0d11f9d90d1b9b3 366 Gene3D G3DSA:3.20.20.10 10 211 4.9E-67 T 05-07-2017 IPR029066 PLP-binding barrel AC028_RS14620 6c174a26a51f3007b0d11f9d90d1b9b3 366 Pfam PF01168 Alanine racemase, N-terminal domain 8 218 1.1E-65 T 05-07-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AC028_RS14620 6c174a26a51f3007b0d11f9d90d1b9b3 366 SMART SM01005 232 355 2.2E-63 T 05-07-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AC028_RS14620 6c174a26a51f3007b0d11f9d90d1b9b3 366 SUPERFAMILY SSF51419 8 233 2.75E-70 T 05-07-2017 IPR029066 PLP-binding barrel AC028_RS14620 6c174a26a51f3007b0d11f9d90d1b9b3 366 TIGRFAM TIGR00492 alr: alanine racemase 2 355 3.1E-107 T 05-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AC028_RS14620 6c174a26a51f3007b0d11f9d90d1b9b3 366 Gene3D G3DSA:2.40.37.10 212 356 3.6E-55 T 05-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AC028_RS14620 6c174a26a51f3007b0d11f9d90d1b9b3 366 PRINTS PR00992 Alanine racemase signature 60 78 2.3E-59 T 05-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AC028_RS14620 6c174a26a51f3007b0d11f9d90d1b9b3 366 PRINTS PR00992 Alanine racemase signature 265 280 2.3E-59 T 05-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AC028_RS14620 6c174a26a51f3007b0d11f9d90d1b9b3 366 PRINTS PR00992 Alanine racemase signature 154 165 2.3E-59 T 05-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AC028_RS14620 6c174a26a51f3007b0d11f9d90d1b9b3 366 PRINTS PR00992 Alanine racemase signature 286 303 2.3E-59 T 05-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AC028_RS14620 6c174a26a51f3007b0d11f9d90d1b9b3 366 PRINTS PR00992 Alanine racemase signature 248 263 2.3E-59 T 05-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AC028_RS14620 6c174a26a51f3007b0d11f9d90d1b9b3 366 PRINTS PR00992 Alanine racemase signature 25 41 2.3E-59 T 05-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AC028_RS14620 6c174a26a51f3007b0d11f9d90d1b9b3 366 PRINTS PR00992 Alanine racemase signature 120 132 2.3E-59 T 05-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AC028_RS14620 6c174a26a51f3007b0d11f9d90d1b9b3 366 PRINTS PR00992 Alanine racemase signature 191 218 2.3E-59 T 05-07-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AC028_RS14620 6c174a26a51f3007b0d11f9d90d1b9b3 366 Pfam PF00842 Alanine racemase, C-terminal domain 232 354 5.4E-37 T 05-07-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AC028_RS19195 e0b012a94e4c3c37587b729e361f09a3 259 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 9 249 2.9E-77 T 05-07-2017 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AC028_RS19195 e0b012a94e4c3c37587b729e361f09a3 259 Gene3D G3DSA:3.90.550.10 9 255 2.5E-73 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS19195 e0b012a94e4c3c37587b729e361f09a3 259 SUPERFAMILY SSF53448 9 253 1.53E-57 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS19195 e0b012a94e4c3c37587b729e361f09a3 259 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 7 257 38.664 T 05-07-2017 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AC028_RS19195 e0b012a94e4c3c37587b729e361f09a3 259 Pfam PF02348 Cytidylyltransferase 11 230 5.4E-46 T 05-07-2017 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AC028_RS11070 1b78826718d701abfe4af9549912573f 314 PIRSF PIRSF000903 1 275 2.9E-119 T 05-07-2017 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AC028_RS11070 1b78826718d701abfe4af9549912573f 314 SUPERFAMILY SSF56300 1 273 2.35E-48 T 05-07-2017 IPR029052 Metallo-dependent phosphatase-like AC028_RS11070 1b78826718d701abfe4af9549912573f 314 Gene3D G3DSA:3.60.21.10 1 134 7.7E-50 T 05-07-2017 IPR029052 Metallo-dependent phosphatase-like AC028_RS11070 1b78826718d701abfe4af9549912573f 314 Gene3D G3DSA:3.60.21.10 170 267 7.7E-50 T 05-07-2017 IPR029052 Metallo-dependent phosphatase-like AC028_RS11070 1b78826718d701abfe4af9549912573f 314 Pfam PF00149 Calcineurin-like phosphoesterase 1 149 8.3E-13 T 05-07-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AC028_RS11070 1b78826718d701abfe4af9549912573f 314 PRINTS PR00114 Serine/threonine phosphatase family signature 176 192 2.2E-5 T 05-07-2017 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 AC028_RS11070 1b78826718d701abfe4af9549912573f 314 PRINTS PR00114 Serine/threonine phosphatase family signature 32 59 2.2E-5 T 05-07-2017 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 AC028_RS11070 1b78826718d701abfe4af9549912573f 314 PRINTS PR00114 Serine/threonine phosphatase family signature 2 29 2.2E-5 T 05-07-2017 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 AC028_RS11070 1b78826718d701abfe4af9549912573f 314 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 44.997 T 05-07-2017 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AC028_RS11070 1b78826718d701abfe4af9549912573f 314 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 259 2.4E-77 T 05-07-2017 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AC028_RS20125 cd8e92f78a7314bfbfb156f0f8b28a82 366 SUPERFAMILY SSF55031 166 272 4.54E-10 T 05-07-2017 IPR011650 Peptidase M20, dimerisation domain AC028_RS20125 cd8e92f78a7314bfbfb156f0f8b28a82 366 Pfam PF01546 Peptidase family M20/M25/M40 68 362 2.0E-16 T 05-07-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AC028_RS20125 cd8e92f78a7314bfbfb156f0f8b28a82 366 SUPERFAMILY SSF53187 5 166 2.92E-33 T 05-07-2017 AC028_RS20125 cd8e92f78a7314bfbfb156f0f8b28a82 366 SUPERFAMILY SSF53187 288 362 2.92E-33 T 05-07-2017 AC028_RS20125 cd8e92f78a7314bfbfb156f0f8b28a82 366 Pfam PF07687 Peptidase dimerisation domain 164 271 4.5E-14 T 05-07-2017 IPR011650 Peptidase M20, dimerisation domain AC028_RS20125 cd8e92f78a7314bfbfb156f0f8b28a82 366 Gene3D G3DSA:3.30.70.360 176 272 5.0E-11 T 05-07-2017 IPR011650 Peptidase M20, dimerisation domain AC028_RS20125 cd8e92f78a7314bfbfb156f0f8b28a82 366 Gene3D G3DSA:3.40.630.10 7 175 2.5E-41 T 05-07-2017 AC028_RS20125 cd8e92f78a7314bfbfb156f0f8b28a82 366 Gene3D G3DSA:3.40.630.10 307 362 2.5E-41 T 05-07-2017 AC028_RS02295 b37c27529cf59decc9a70831d858039a 170 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 36 159 3.6E-41 T 05-07-2017 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 AC028_RS02295 b37c27529cf59decc9a70831d858039a 170 Pfam PF08332 Calcium/calmodulin dependent protein kinase II association domain 36 159 1.1E-47 T 05-07-2017 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain GO:0004683|GO:0005516|GO:0006468 Reactome: R-HSA-3371571|Reactome: R-HSA-399719|Reactome: R-HSA-438066|Reactome: R-HSA-442729|Reactome: R-HSA-442742|Reactome: R-HSA-442982|Reactome: R-HSA-5576892|Reactome: R-HSA-5578775|Reactome: R-HSA-5673001|Reactome: R-HSA-877300|Reactome: R-HSA-936837 AC028_RS02295 b37c27529cf59decc9a70831d858039a 170 PIRSF PIRSF028470 1 162 4.2E-73 T 05-07-2017 IPR016887 Uncharacterised conserved protein UCP028470, steroid isomerase-related AC028_RS02295 b37c27529cf59decc9a70831d858039a 170 SUPERFAMILY SSF54427 36 158 4.1E-32 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS02295 b37c27529cf59decc9a70831d858039a 170 Gene3D G3DSA:3.10.450.50 36 162 1.3E-33 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS02230 106580952aea15bdfd5ab22de3828c8c 400 Gene3D G3DSA:3.30.950.10 249 380 1.3E-47 T 05-07-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AC028_RS02230 106580952aea15bdfd5ab22de3828c8c 400 SUPERFAMILY SSF53790 130 377 4.45E-78 T 05-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AC028_RS02230 106580952aea15bdfd5ab22de3828c8c 400 SUPERFAMILY SSF51735 5 104 1.57E-11 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS02230 106580952aea15bdfd5ab22de3828c8c 400 Gene3D G3DSA:3.40.50.720 4 109 1.7E-18 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS02230 106580952aea15bdfd5ab22de3828c8c 400 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 135 344 3.9E-51 T 05-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AC028_RS02230 106580952aea15bdfd5ab22de3828c8c 400 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 213 246 - T 05-07-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AC028_RS02230 106580952aea15bdfd5ab22de3828c8c 400 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 5 104 3.8E-18 T 05-07-2017 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AC028_RS02230 106580952aea15bdfd5ab22de3828c8c 400 Gene3D G3DSA:3.40.1010.10 132 248 4.0E-44 T 05-07-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AC028_RS02230 106580952aea15bdfd5ab22de3828c8c 400 Pfam PF13241 Putative NAD(P)-binding 8 109 2.1E-8 T 05-07-2017 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AC028_RS02230 106580952aea15bdfd5ab22de3828c8c 400 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 133 368 6.5E-91 T 05-07-2017 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AC028_RS03840 0f0b2ccd8cdd51414e4cb22ef394578c 296 SMART SM00267 115 288 5.2E-64 T 05-07-2017 IPR000160 GGDEF domain AC028_RS03840 0f0b2ccd8cdd51414e4cb22ef394578c 296 Gene3D G3DSA:3.30.70.270 128 286 1.3E-54 T 05-07-2017 AC028_RS03840 0f0b2ccd8cdd51414e4cb22ef394578c 296 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 122 286 9.8E-56 T 05-07-2017 IPR000160 GGDEF domain AC028_RS03840 0f0b2ccd8cdd51414e4cb22ef394578c 296 Gene3D G3DSA:3.30.450.40 3 126 2.6E-10 T 05-07-2017 IPR029016 GAF domain-like AC028_RS03840 0f0b2ccd8cdd51414e4cb22ef394578c 296 SUPERFAMILY SSF55781 3 125 1.22E-11 T 05-07-2017 IPR029016 GAF domain-like AC028_RS03840 0f0b2ccd8cdd51414e4cb22ef394578c 296 SUPERFAMILY SSF55073 131 286 6.67E-50 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS03840 0f0b2ccd8cdd51414e4cb22ef394578c 296 Pfam PF00990 Diguanylate cyclase, GGDEF domain 127 284 8.7E-49 T 05-07-2017 IPR000160 GGDEF domain AC028_RS03840 0f0b2ccd8cdd51414e4cb22ef394578c 296 Pfam PF13185 GAF domain 18 113 2.1E-7 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS12355 2211bf18d605d30f843b06e7040dbaeb 864 SUPERFAMILY SSF53732 22 588 1.57E-180 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS12355 2211bf18d605d30f843b06e7040dbaeb 864 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 859 0.0 T 05-07-2017 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 AC028_RS12355 2211bf18d605d30f843b06e7040dbaeb 864 PRINTS PR00415 Aconitase family signature 360 374 4.3E-28 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS12355 2211bf18d605d30f843b06e7040dbaeb 864 PRINTS PR00415 Aconitase family signature 402 413 4.3E-28 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS12355 2211bf18d605d30f843b06e7040dbaeb 864 PRINTS PR00415 Aconitase family signature 191 204 4.3E-28 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS12355 2211bf18d605d30f843b06e7040dbaeb 864 PRINTS PR00415 Aconitase family signature 464 477 4.3E-28 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS12355 2211bf18d605d30f843b06e7040dbaeb 864 PRINTS PR00415 Aconitase family signature 205 220 4.3E-28 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS12355 2211bf18d605d30f843b06e7040dbaeb 864 PRINTS PR00415 Aconitase family signature 138 151 4.3E-28 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS12355 2211bf18d605d30f843b06e7040dbaeb 864 PRINTS PR00415 Aconitase family signature 267 280 4.3E-28 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS12355 2211bf18d605d30f843b06e7040dbaeb 864 PRINTS PR00415 Aconitase family signature 162 170 4.3E-28 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS12355 2211bf18d605d30f843b06e7040dbaeb 864 PRINTS PR00415 Aconitase family signature 281 294 4.3E-28 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS12355 2211bf18d605d30f843b06e7040dbaeb 864 Gene3D G3DSA:3.30.499.10 22 236 2.3E-60 T 05-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS12355 2211bf18d605d30f843b06e7040dbaeb 864 Pfam PF00330 Aconitase family (aconitate hydratase) 70 533 6.1E-146 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS12355 2211bf18d605d30f843b06e7040dbaeb 864 Pfam PF00694 Aconitase C-terminal domain 657 787 2.4E-29 T 05-07-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS12355 2211bf18d605d30f843b06e7040dbaeb 864 Gene3D G3DSA:3.40.1060.10 239 355 8.4E-33 T 05-07-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS12355 2211bf18d605d30f843b06e7040dbaeb 864 Gene3D G3DSA:3.20.19.10 606 856 4.5E-65 T 05-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AC028_RS12355 2211bf18d605d30f843b06e7040dbaeb 864 SUPERFAMILY SSF52016 599 857 4.51E-67 T 05-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AC028_RS12355 2211bf18d605d30f843b06e7040dbaeb 864 Gene3D G3DSA:3.30.499.10 357 545 7.7E-55 T 05-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS08635 73242855bb424a433be9d54196104543 238 Gene3D G3DSA:1.25.40.10 126 220 2.2E-4 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS15045 e27ef55a86ecff72d10500f228a96c3b 460 SUPERFAMILY SSF52540 75 361 7.92E-74 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS15045 e27ef55a86ecff72d10500f228a96c3b 460 SMART SM00490 260 341 2.1E-31 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS15045 e27ef55a86ecff72d10500f228a96c3b 460 Pfam PF00270 DEAD/DEAH box helicase 25 198 2.0E-49 T 05-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AC028_RS15045 e27ef55a86ecff72d10500f228a96c3b 460 Pfam PF00271 Helicase conserved C-terminal domain 234 341 8.1E-28 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS15045 e27ef55a86ecff72d10500f228a96c3b 460 SMART SM00487 20 224 1.1E-60 T 05-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_RS15045 e27ef55a86ecff72d10500f228a96c3b 460 Gene3D G3DSA:3.40.50.300 214 370 2.6E-50 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS15045 e27ef55a86ecff72d10500f228a96c3b 460 Gene3D G3DSA:3.40.50.300 1 213 1.7E-82 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS15045 e27ef55a86ecff72d10500f228a96c3b 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 05-07-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AC028_RS04805 769467f166b1c973fa9556f110d71ca8 449 Pfam PF04820 Tryptophan halogenase 14 97 1.1E-11 T 05-07-2017 IPR006905 Tryptophan halogenase AC028_RS04805 769467f166b1c973fa9556f110d71ca8 449 Pfam PF04820 Tryptophan halogenase 102 362 2.8E-17 T 05-07-2017 IPR006905 Tryptophan halogenase AC028_RS04805 769467f166b1c973fa9556f110d71ca8 449 Gene3D G3DSA:3.50.50.60 283 324 2.2E-40 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS04805 769467f166b1c973fa9556f110d71ca8 449 Gene3D G3DSA:3.50.50.60 14 187 2.2E-40 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS04805 769467f166b1c973fa9556f110d71ca8 449 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 14 36 2.1E-7 T 05-07-2017 AC028_RS04805 769467f166b1c973fa9556f110d71ca8 449 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 291 306 2.1E-7 T 05-07-2017 AC028_RS04805 769467f166b1c973fa9556f110d71ca8 449 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 161 176 2.1E-7 T 05-07-2017 AC028_RS04805 769467f166b1c973fa9556f110d71ca8 449 SUPERFAMILY SSF51905 13 182 3.65E-40 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS04805 769467f166b1c973fa9556f110d71ca8 449 SUPERFAMILY SSF51905 287 354 3.65E-40 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS18685 12963a01ce1d2e7c3ee6956cc1254bc2 697 Gene3D G3DSA:3.30.450.20 338 459 9.2E-17 T 05-07-2017 AC028_RS18685 12963a01ce1d2e7c3ee6956cc1254bc2 697 SUPERFAMILY SSF55874 561 683 1.31E-21 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS18685 12963a01ce1d2e7c3ee6956cc1254bc2 697 SUPERFAMILY SSF55785 209 338 4.01E-8 T 05-07-2017 IPR000014 PAS domain AC028_RS18685 12963a01ce1d2e7c3ee6956cc1254bc2 697 SMART SM00387 594 686 4.2E-12 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS18685 12963a01ce1d2e7c3ee6956cc1254bc2 697 SMART SM00091 93 164 1.3E-7 T 05-07-2017 IPR000014 PAS domain AC028_RS18685 12963a01ce1d2e7c3ee6956cc1254bc2 697 SMART SM00091 222 288 270.0 T 05-07-2017 IPR000014 PAS domain AC028_RS18685 12963a01ce1d2e7c3ee6956cc1254bc2 697 SMART SM00091 352 417 1.2E-6 T 05-07-2017 IPR000014 PAS domain AC028_RS18685 12963a01ce1d2e7c3ee6956cc1254bc2 697 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 348 470 4.5E-15 T 05-07-2017 IPR000014 PAS domain AC028_RS18685 12963a01ce1d2e7c3ee6956cc1254bc2 697 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 94 205 2.9E-8 T 05-07-2017 IPR000014 PAS domain AC028_RS18685 12963a01ce1d2e7c3ee6956cc1254bc2 697 Pfam PF07730 Histidine kinase 491 556 1.5E-12 T 05-07-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AC028_RS18685 12963a01ce1d2e7c3ee6956cc1254bc2 697 Gene3D G3DSA:3.30.450.20 90 204 4.3E-16 T 05-07-2017 AC028_RS18685 12963a01ce1d2e7c3ee6956cc1254bc2 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 670 683 6.5E-9 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS18685 12963a01ce1d2e7c3ee6956cc1254bc2 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 645 6.5E-9 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS18685 12963a01ce1d2e7c3ee6956cc1254bc2 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 646 664 6.5E-9 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS18685 12963a01ce1d2e7c3ee6956cc1254bc2 697 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 598 684 5.1E-9 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS18685 12963a01ce1d2e7c3ee6956cc1254bc2 697 Pfam PF08448 PAS fold 107 211 4.9E-8 T 05-07-2017 IPR013656 PAS fold-4 AC028_RS18685 12963a01ce1d2e7c3ee6956cc1254bc2 697 SUPERFAMILY SSF55785 337 460 1.82E-17 T 05-07-2017 IPR000014 PAS domain AC028_RS18685 12963a01ce1d2e7c3ee6956cc1254bc2 697 Gene3D G3DSA:3.30.450.20 213 337 1.2E-9 T 05-07-2017 AC028_RS18685 12963a01ce1d2e7c3ee6956cc1254bc2 697 Pfam PF13426 PAS domain 362 462 2.3E-7 T 05-07-2017 IPR000014 PAS domain AC028_RS18685 12963a01ce1d2e7c3ee6956cc1254bc2 697 Gene3D G3DSA:3.30.565.10 571 686 1.1E-12 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS18685 12963a01ce1d2e7c3ee6956cc1254bc2 697 SUPERFAMILY SSF55785 90 204 4.33E-15 T 05-07-2017 IPR000014 PAS domain AC028_RS20545 1baeedd0c1a558fe29c4881731ee9630 214 Pfam PF00355 Rieske [2Fe-2S] domain 109 182 1.5E-9 T 05-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AC028_RS20545 1baeedd0c1a558fe29c4881731ee9630 214 Gene3D G3DSA:1.20.5.510 13 44 2.4E-7 T 05-07-2017 AC028_RS20545 1baeedd0c1a558fe29c4881731ee9630 214 Gene3D G3DSA:2.102.10.10 50 203 5.2E-32 T 05-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AC028_RS20545 1baeedd0c1a558fe29c4881731ee9630 214 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 9 44 2.7E-15 T 05-07-2017 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AC028_RS20545 1baeedd0c1a558fe29c4881731ee9630 214 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 13 198 2.1E-68 T 05-07-2017 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AC028_RS20545 1baeedd0c1a558fe29c4881731ee9630 214 SUPERFAMILY SSF50022 34 200 1.19E-38 T 05-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AC028_RS20545 1baeedd0c1a558fe29c4881731ee9630 214 PRINTS PR00162 Rieske 2Fe-2S subunit signature 157 169 2.6E-5 T 05-07-2017 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AC028_RS20545 1baeedd0c1a558fe29c4881731ee9630 214 PRINTS PR00162 Rieske 2Fe-2S subunit signature 126 137 2.6E-5 T 05-07-2017 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AC028_RS05585 3277eb8fa05707a830fc15b51ac76270 167 SUPERFAMILY SSF51182 30 146 1.61E-16 T 05-07-2017 IPR011051 RmlC-like cupin domain AC028_RS05585 3277eb8fa05707a830fc15b51ac76270 167 Pfam PF07883 Cupin domain 60 131 2.1E-11 T 05-07-2017 IPR013096 Cupin 2, conserved barrel AC028_RS05585 3277eb8fa05707a830fc15b51ac76270 167 Gene3D G3DSA:2.60.120.10 38 136 6.1E-16 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 SUPERFAMILY SSF47384 254 331 9.42E-17 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 SUPERFAMILY SSF55874 323 495 8.77E-48 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 SMART SM00387 380 493 3.7E-42 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 SMART SM00448 522 640 1.3E-29 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 Pfam PF00072 Response regulator receiver domain 525 641 5.8E-22 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 SMART SM00086 199 241 3.5E-6 T 05-07-2017 IPR001610 PAC motif AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 123 246 1.0E-16 T 05-07-2017 IPR000014 PAS domain AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 2 122 3.9E-6 T 05-07-2017 IPR000014 PAS domain AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 Pfam PF13188 PAS domain 2 69 0.015 T 05-07-2017 IPR000014 PAS domain AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 SUPERFAMILY SSF52172 520 645 2.56E-32 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 Gene3D G3DSA:3.30.565.10 335 495 1.3E-45 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 Gene3D G3DSA:3.30.450.20 114 239 3.3E-28 T 05-07-2017 AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 Pfam PF08448 PAS fold 134 243 5.3E-14 T 05-07-2017 IPR013656 PAS fold-4 AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 SMART SM00091 127 193 6.0E-9 T 05-07-2017 IPR000014 PAS domain AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 380 492 3.2E-28 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 Gene3D G3DSA:3.30.450.20 2 113 2.4E-10 T 05-07-2017 AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 490 2.6E-16 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 445 2.6E-16 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 470 2.6E-16 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 431 2.6E-16 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 Gene3D G3DSA:1.10.287.130 261 329 3.3E-15 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 SUPERFAMILY SSF55785 27 123 6.63E-11 T 05-07-2017 IPR000014 PAS domain AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 Gene3D G3DSA:3.40.50.2300 520 643 5.5E-32 T 05-07-2017 AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 SUPERFAMILY SSF55785 112 239 1.22E-28 T 05-07-2017 IPR000014 PAS domain AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 331 1.4E-14 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS14640 cc4ae20ccfd9b2cc96d4a0cefa9344e4 648 SMART SM00388 268 334 7.8E-15 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS02290 0e57d6f062b160ec324ba2228b00b28b 333 SMART SM00846 3 152 5.2E-99 T 05-07-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02290 0e57d6f062b160ec324ba2228b00b28b 333 SUPERFAMILY SSF55347 151 314 1.01E-73 T 05-07-2017 AC028_RS02290 0e57d6f062b160ec324ba2228b00b28b 333 Gene3D G3DSA:3.40.50.720 3 160 7.2E-80 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS02290 0e57d6f062b160ec324ba2228b00b28b 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 05-07-2017 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02290 0e57d6f062b160ec324ba2228b00b28b 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 5.3E-134 T 05-07-2017 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02290 0e57d6f062b160ec324ba2228b00b28b 333 PIRSF PIRSF000149 1 333 2.2E-130 T 05-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02290 0e57d6f062b160ec324ba2228b00b28b 333 Gene3D G3DSA:3.30.360.10 161 316 9.4E-81 T 05-07-2017 AC028_RS02290 0e57d6f062b160ec324ba2228b00b28b 333 SUPERFAMILY SSF51735 3 168 1.25E-67 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS02290 0e57d6f062b160ec324ba2228b00b28b 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 5.2E-47 T 05-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02290 0e57d6f062b160ec324ba2228b00b28b 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 5.2E-47 T 05-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02290 0e57d6f062b160ec324ba2228b00b28b 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 5.2E-47 T 05-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02290 0e57d6f062b160ec324ba2228b00b28b 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 5.2E-47 T 05-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02290 0e57d6f062b160ec324ba2228b00b28b 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 5.2E-47 T 05-07-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02290 0e57d6f062b160ec324ba2228b00b28b 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 152 4.8E-61 T 05-07-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02290 0e57d6f062b160ec324ba2228b00b28b 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 2.2E-65 T 05-07-2017 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS11845 76b35c6c7d04d4bc5e3e5c1fdd5c0f39 679 Gene3D G3DSA:3.20.20.70 12 369 1.7E-112 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS11845 76b35c6c7d04d4bc5e3e5c1fdd5c0f39 679 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 384 645 6.0E-21 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS11845 76b35c6c7d04d4bc5e3e5c1fdd5c0f39 679 Gene3D G3DSA:3.50.50.60 370 473 1.8E-26 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS11845 76b35c6c7d04d4bc5e3e5c1fdd5c0f39 679 Gene3D G3DSA:3.50.50.60 479 632 5.9E-45 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS11845 76b35c6c7d04d4bc5e3e5c1fdd5c0f39 679 SUPERFAMILY SSF51395 10 371 4.71E-103 T 05-07-2017 AC028_RS11845 76b35c6c7d04d4bc5e3e5c1fdd5c0f39 679 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 15 337 4.3E-71 T 05-07-2017 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AC028_RS11845 76b35c6c7d04d4bc5e3e5c1fdd5c0f39 679 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 522 531 2.0E-5 T 05-07-2017 AC028_RS11845 76b35c6c7d04d4bc5e3e5c1fdd5c0f39 679 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 385 407 2.0E-5 T 05-07-2017 AC028_RS11845 76b35c6c7d04d4bc5e3e5c1fdd5c0f39 679 SUPERFAMILY SSF51971 342 527 3.94E-41 T 05-07-2017 AC028_RS11845 76b35c6c7d04d4bc5e3e5c1fdd5c0f39 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 625 641 7.6E-11 T 05-07-2017 AC028_RS11845 76b35c6c7d04d4bc5e3e5c1fdd5c0f39 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 386 405 7.6E-11 T 05-07-2017 AC028_RS11845 76b35c6c7d04d4bc5e3e5c1fdd5c0f39 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 506 524 7.6E-11 T 05-07-2017 AC028_RS11845 76b35c6c7d04d4bc5e3e5c1fdd5c0f39 679 SUPERFAMILY SSF51905 469 527 2.59E-19 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS11845 76b35c6c7d04d4bc5e3e5c1fdd5c0f39 679 SUPERFAMILY SSF51905 563 657 2.59E-19 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS06610 bcb796be3b5251a57d8171f09b90764c 200 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 74 90 - T 05-07-2017 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 AC028_RS06610 bcb796be3b5251a57d8171f09b90764c 200 Gene3D G3DSA:1.10.286.10 12 63 1.5E-23 T 05-07-2017 AC028_RS06610 bcb796be3b5251a57d8171f09b90764c 200 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 122 132 - T 05-07-2017 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 AC028_RS06610 bcb796be3b5251a57d8171f09b90764c 200 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 17 194 1.9E-64 T 05-07-2017 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 AC028_RS06610 bcb796be3b5251a57d8171f09b90764c 200 Pfam PF01227 GTP cyclohydrolase I 17 194 3.1E-72 T 05-07-2017 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 AC028_RS06610 bcb796be3b5251a57d8171f09b90764c 200 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 12 195 38.482 T 05-07-2017 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 AC028_RS06610 bcb796be3b5251a57d8171f09b90764c 200 Gene3D G3DSA:3.30.1130.10 69 195 8.9E-53 T 05-07-2017 AC028_RS06610 bcb796be3b5251a57d8171f09b90764c 200 SUPERFAMILY SSF55620 7 195 8.15E-74 T 05-07-2017 AC028_RS11695 fd41df51847764adf7c1f7d1e0a8cb77 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 102 3.4E-32 T 05-07-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11695 fd41df51847764adf7c1f7d1e0a8cb77 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.216 T 05-07-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11695 fd41df51847764adf7c1f7d1e0a8cb77 105 Gene3D G3DSA:2.30.30.30 4 92 3.9E-20 T 05-07-2017 IPR014722 Ribosomal protein L2 domain 2 AC028_RS11695 fd41df51847764adf7c1f7d1e0a8cb77 105 SMART SM00739 4 31 1.3E-5 T 05-07-2017 IPR005824 KOW AC028_RS11695 fd41df51847764adf7c1f7d1e0a8cb77 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 3.5E-23 T 05-07-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11695 fd41df51847764adf7c1f7d1e0a8cb77 105 Pfam PF00467 KOW motif 7 35 5.1E-6 T 05-07-2017 IPR005824 KOW AC028_RS11695 fd41df51847764adf7c1f7d1e0a8cb77 105 SUPERFAMILY SSF50104 3 99 3.31E-29 T 05-07-2017 IPR008991 Translation protein SH3-like domain AC028_RS02870 78c29c8dbde119053e7fcfc8912aa5f9 372 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 35 298 8.3E-72 T 05-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AC028_RS02870 78c29c8dbde119053e7fcfc8912aa5f9 372 Gene3D G3DSA:3.40.50.1100 82 318 8.3E-57 T 05-07-2017 AC028_RS02870 78c29c8dbde119053e7fcfc8912aa5f9 372 SUPERFAMILY SSF53686 20 313 1.31E-78 T 05-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AC028_RS16035 76883c4a80d4abb836747fe703a34484 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 457 3.0E-20 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS16035 76883c4a80d4abb836747fe703a34484 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 8.7E-13 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS16035 76883c4a80d4abb836747fe703a34484 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 416 8.7E-13 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS16035 76883c4a80d4abb836747fe703a34484 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 8.7E-13 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS16035 76883c4a80d4abb836747fe703a34484 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 457 8.7E-13 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS16035 76883c4a80d4abb836747fe703a34484 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 300 1.0E-9 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS16035 76883c4a80d4abb836747fe703a34484 461 SUPERFAMILY SSF55874 298 457 3.14E-35 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS16035 76883c4a80d4abb836747fe703a34484 461 SUPERFAMILY SSF47384 225 300 3.53E-14 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS16035 76883c4a80d4abb836747fe703a34484 461 Pfam PF08521 Two-component sensor kinase N-terminal 25 165 1.4E-38 T 05-07-2017 IPR013727 Two-component sensor kinase, N-terminal AC028_RS16035 76883c4a80d4abb836747fe703a34484 461 Gene3D G3DSA:1.10.287.130 234 300 5.3E-10 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS16035 76883c4a80d4abb836747fe703a34484 461 SMART SM00387 352 460 9.5E-29 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS16035 76883c4a80d4abb836747fe703a34484 461 SMART SM00388 242 307 1.0E-10 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS16035 76883c4a80d4abb836747fe703a34484 461 Gene3D G3DSA:3.30.565.10 313 457 5.9E-35 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS14465 43a7bc791b18b1f3ebbdf164c2f0adba 258 SMART SM00448 4 116 1.7E-27 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS14465 43a7bc791b18b1f3ebbdf164c2f0adba 258 SMART SM00850 162 258 3.4E-21 T 05-07-2017 IPR007492 LytTR DNA-binding domain GO:0003677 AC028_RS14465 43a7bc791b18b1f3ebbdf164c2f0adba 258 Gene3D G3DSA:3.40.50.2300 3 127 3.5E-34 T 05-07-2017 AC028_RS14465 43a7bc791b18b1f3ebbdf164c2f0adba 258 SUPERFAMILY SSF52172 1 155 3.27E-34 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS14465 43a7bc791b18b1f3ebbdf164c2f0adba 258 Pfam PF00072 Response regulator receiver domain 7 115 9.9E-25 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS14465 43a7bc791b18b1f3ebbdf164c2f0adba 258 Pfam PF04397 LytTr DNA-binding domain 163 257 2.7E-20 T 05-07-2017 IPR007492 LytTR DNA-binding domain GO:0003677 AC028_RS14465 43a7bc791b18b1f3ebbdf164c2f0adba 258 Gene3D G3DSA:2.40.50.40 155 221 3.5E-15 T 05-07-2017 AC028_RS10610 32e00c24077e2525c9b991d83b90ed28 622 SUPERFAMILY SSF56519 57 224 5.23E-47 T 05-07-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AC028_RS10610 32e00c24077e2525c9b991d83b90ed28 622 SUPERFAMILY SSF56601 177 572 1.62E-95 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS10610 32e00c24077e2525c9b991d83b90ed28 622 Gene3D G3DSA:3.90.1310.10 132 231 1.5E-30 T 05-07-2017 AC028_RS10610 32e00c24077e2525c9b991d83b90ed28 622 Pfam PF00905 Penicillin binding protein transpeptidase domain 250 546 9.2E-80 T 05-07-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AC028_RS10610 32e00c24077e2525c9b991d83b90ed28 622 Gene3D G3DSA:3.40.710.10 232 551 7.5E-90 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS10610 32e00c24077e2525c9b991d83b90ed28 622 Pfam PF03717 Penicillin-binding Protein dimerisation domain 62 209 8.2E-20 T 05-07-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AC028_RS11735 6bcf3ef6a87b5254c2b713bc8698049b 147 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 5 147 17.174 T 05-07-2017 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AC028_RS11735 6bcf3ef6a87b5254c2b713bc8698049b 147 SUPERFAMILY SSF52080 6 146 2.88E-38 T 05-07-2017 IPR021131 Ribosomal protein L18e/L15P AC028_RS11735 6bcf3ef6a87b5254c2b713bc8698049b 147 ProSitePatterns PS00475 Ribosomal protein L15 signature. 112 142 - T 05-07-2017 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11735 6bcf3ef6a87b5254c2b713bc8698049b 147 Gene3D G3DSA:3.100.10.10 34 146 4.5E-18 T 05-07-2017 AC028_RS11735 6bcf3ef6a87b5254c2b713bc8698049b 147 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 4 146 7.0E-44 T 05-07-2017 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11735 6bcf3ef6a87b5254c2b713bc8698049b 147 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 30 146 3.5E-26 T 05-07-2017 IPR021131 Ribosomal protein L18e/L15P AC028_RS18550 0667d0cb3d3603101c30796b216b9b0d 494 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 466 486 5.5E-12 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS18550 0667d0cb3d3603101c30796b216b9b0d 494 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 466 5.5E-12 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS18550 0667d0cb3d3603101c30796b216b9b0d 494 Pfam PF02954 Bacterial regulatory protein, Fis family 444 483 1.4E-12 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS18550 0667d0cb3d3603101c30796b216b9b0d 494 Gene3D G3DSA:3.40.50.300 138 310 1.1E-60 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18550 0667d0cb3d3603101c30796b216b9b0d 494 SUPERFAMILY SSF52540 140 379 2.99E-72 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18550 0667d0cb3d3603101c30796b216b9b0d 494 Gene3D G3DSA:1.10.8.60 311 383 6.3E-22 T 05-07-2017 AC028_RS18550 0667d0cb3d3603101c30796b216b9b0d 494 SUPERFAMILY SSF46689 433 486 8.51E-12 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS18550 0667d0cb3d3603101c30796b216b9b0d 494 SUPERFAMILY SSF46689 350 393 8.51E-12 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS18550 0667d0cb3d3603101c30796b216b9b0d 494 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 05-07-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AC028_RS18550 0667d0cb3d3603101c30796b216b9b0d 494 Gene3D G3DSA:1.10.10.60 424 486 4.1E-15 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS18550 0667d0cb3d3603101c30796b216b9b0d 494 Pfam PF00158 Sigma-54 interaction domain 140 305 2.0E-71 T 05-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AC028_RS18550 0667d0cb3d3603101c30796b216b9b0d 494 Pfam PF06490 Flagellar regulatory protein FleQ 5 120 4.3E-20 T 05-07-2017 IPR010518 Flagellar regulatory FleQ AC028_RS18550 0667d0cb3d3603101c30796b216b9b0d 494 SMART SM00382 158 305 3.1E-12 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS18550 0667d0cb3d3603101c30796b216b9b0d 494 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 05-07-2017 IPR025944 Sigma-54 interaction domain, conserved site AC028_RS18550 0667d0cb3d3603101c30796b216b9b0d 494 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 162 175 - T 05-07-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AC028_RS05365 609ecc94e1870a8eeb83d6395af62582 351 SUPERFAMILY SSF55874 192 338 3.93E-30 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS05365 609ecc94e1870a8eeb83d6395af62582 351 Pfam PF00512 His Kinase A (phospho-acceptor) domain 123 182 8.8E-13 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS05365 609ecc94e1870a8eeb83d6395af62582 351 SUPERFAMILY SSF47384 119 182 4.51E-11 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS05365 609ecc94e1870a8eeb83d6395af62582 351 Gene3D G3DSA:3.30.565.10 191 338 9.2E-31 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS05365 609ecc94e1870a8eeb83d6395af62582 351 Gene3D G3DSA:1.10.287.130 123 181 1.1E-12 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS05365 609ecc94e1870a8eeb83d6395af62582 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 338 2.8E-8 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS05365 609ecc94e1870a8eeb83d6395af62582 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 320 2.8E-8 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS05365 609ecc94e1870a8eeb83d6395af62582 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 273 287 2.8E-8 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS05365 609ecc94e1870a8eeb83d6395af62582 351 SMART SM00387 228 341 9.0E-28 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS05365 609ecc94e1870a8eeb83d6395af62582 351 Gene3D G3DSA:3.30.450.20 10 96 2.6E-9 T 05-07-2017 AC028_RS05365 609ecc94e1870a8eeb83d6395af62582 351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 228 339 7.9E-17 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS05365 609ecc94e1870a8eeb83d6395af62582 351 SMART SM00388 122 189 4.5E-12 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS05365 609ecc94e1870a8eeb83d6395af62582 351 SUPERFAMILY SSF55785 10 70 1.66E-7 T 05-07-2017 IPR000014 PAS domain AC028_RS08490 1ad61cdc18e05d61575e7aead7c4c13c 1490 Pfam PF01645 Conserved region in glutamate synthase 806 1169 5.9E-147 T 05-07-2017 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AC028_RS08490 1ad61cdc18e05d61575e7aead7c4c13c 1490 Gene3D G3DSA:3.20.20.70 825 1199 4.2E-163 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS08490 1ad61cdc18e05d61575e7aead7c4c13c 1490 Gene3D G3DSA:2.160.20.60 1224 1476 4.5E-91 T 05-07-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AC028_RS08490 1ad61cdc18e05d61575e7aead7c4c13c 1490 Gene3D G3DSA:3.20.20.70 452 788 9.5E-91 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS08490 1ad61cdc18e05d61575e7aead7c4c13c 1490 Pfam PF01493 GXGXG motif 1247 1430 1.1E-75 T 05-07-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AC028_RS08490 1ad61cdc18e05d61575e7aead7c4c13c 1490 SUPERFAMILY SSF69336 1221 1476 2.22E-86 T 05-07-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AC028_RS08490 1ad61cdc18e05d61575e7aead7c4c13c 1490 Pfam PF00310 Glutamine amidotransferases class-II 25 437 9.1E-153 T 05-07-2017 IPR017932 Glutamine amidotransferase type 2 domain AC028_RS08490 1ad61cdc18e05d61575e7aead7c4c13c 1490 SUPERFAMILY SSF56235 25 440 2.06E-128 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS08490 1ad61cdc18e05d61575e7aead7c4c13c 1490 Gene3D G3DSA:3.60.20.10 25 446 3.1E-144 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS08490 1ad61cdc18e05d61575e7aead7c4c13c 1490 SUPERFAMILY SSF51395 457 1205 2.06E-247 T 05-07-2017 AC028_RS08490 1ad61cdc18e05d61575e7aead7c4c13c 1490 Pfam PF04898 Glutamate synthase central domain 468 750 2.6E-98 T 05-07-2017 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 AC028_RS15925 dbe5efae678b63eea54b888dc54fa5e6 1006 Gene3D G3DSA:2.170.130.10 58 181 1.8E-23 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS15925 dbe5efae678b63eea54b888dc54fa5e6 1006 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 180 2.8E-15 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS15925 dbe5efae678b63eea54b888dc54fa5e6 1006 SUPERFAMILY SSF56935 736 784 9.16E-75 T 05-07-2017 AC028_RS15925 dbe5efae678b63eea54b888dc54fa5e6 1006 SUPERFAMILY SSF56935 436 692 9.16E-75 T 05-07-2017 AC028_RS15925 dbe5efae678b63eea54b888dc54fa5e6 1006 SUPERFAMILY SSF56935 32 242 9.16E-75 T 05-07-2017 AC028_RS15925 dbe5efae678b63eea54b888dc54fa5e6 1006 SUPERFAMILY SSF56935 831 1001 9.16E-75 T 05-07-2017 AC028_RS15925 dbe5efae678b63eea54b888dc54fa5e6 1006 SUPERFAMILY SSF56935 349 400 9.16E-75 T 05-07-2017 AC028_RS15925 dbe5efae678b63eea54b888dc54fa5e6 1006 Gene3D G3DSA:2.40.170.20 519 1001 3.5E-70 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS15925 dbe5efae678b63eea54b888dc54fa5e6 1006 Gene3D G3DSA:2.40.170.20 322 485 3.5E-70 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS15925 dbe5efae678b63eea54b888dc54fa5e6 1006 Gene3D G3DSA:2.40.170.20 182 245 3.5E-70 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS15925 dbe5efae678b63eea54b888dc54fa5e6 1006 Pfam PF00593 TonB dependent receptor 664 992 1.4E-25 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS11715 a1b45fcb96d0e1b623b29537af5117b6 175 PRINTS PR00059 Ribosomal protein L6 signature 139 160 3.5E-33 T 05-07-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AC028_RS11715 a1b45fcb96d0e1b623b29537af5117b6 175 PRINTS PR00059 Ribosomal protein L6 signature 69 94 3.5E-33 T 05-07-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AC028_RS11715 a1b45fcb96d0e1b623b29537af5117b6 175 PRINTS PR00059 Ribosomal protein L6 signature 97 113 3.5E-33 T 05-07-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AC028_RS11715 a1b45fcb96d0e1b623b29537af5117b6 175 Pfam PF00347 Ribosomal protein L6 12 80 3.0E-14 T 05-07-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11715 a1b45fcb96d0e1b623b29537af5117b6 175 Pfam PF00347 Ribosomal protein L6 88 162 1.3E-19 T 05-07-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11715 a1b45fcb96d0e1b623b29537af5117b6 175 Gene3D G3DSA:3.90.930.12 2 80 2.6E-22 T 05-07-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11715 a1b45fcb96d0e1b623b29537af5117b6 175 SUPERFAMILY SSF56053 81 174 4.03E-35 T 05-07-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11715 a1b45fcb96d0e1b623b29537af5117b6 175 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 152 160 - T 05-07-2017 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11715 a1b45fcb96d0e1b623b29537af5117b6 175 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 174 2.3E-68 T 05-07-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AC028_RS11715 a1b45fcb96d0e1b623b29537af5117b6 175 SUPERFAMILY SSF56053 1 80 2.76E-19 T 05-07-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11715 a1b45fcb96d0e1b623b29537af5117b6 175 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 174 36.323 T 05-07-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AC028_RS11715 a1b45fcb96d0e1b623b29537af5117b6 175 PIRSF PIRSF002162 1 175 1.3E-40 T 05-07-2017 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11715 a1b45fcb96d0e1b623b29537af5117b6 175 Gene3D G3DSA:3.90.930.12 81 174 2.1E-39 T 05-07-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS10425 00e95899e13efbcb42b85801b6c6f012 263 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 239 6.7E-27 T 05-07-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AC028_RS10425 00e95899e13efbcb42b85801b6c6f012 263 Pfam PF02567 Phenazine biosynthesis-like protein 8 259 8.0E-47 T 05-07-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AC028_RS10425 00e95899e13efbcb42b85801b6c6f012 263 PIRSF PIRSF016184 1 263 5.5E-48 T 05-07-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AC028_RS10425 00e95899e13efbcb42b85801b6c6f012 263 SUPERFAMILY SSF54506 1 262 1.52E-72 T 05-07-2017 AC028_RS10425 00e95899e13efbcb42b85801b6c6f012 263 Gene3D G3DSA:3.10.310.10 1 126 6.1E-38 T 05-07-2017 AC028_RS10425 00e95899e13efbcb42b85801b6c6f012 263 Gene3D G3DSA:3.10.310.10 127 251 1.8E-39 T 05-07-2017 AC028_RS13585 032c04c6e98550253304483bb9d61737 1066 SUPERFAMILY SSF53720 585 1051 6.28E-127 T 05-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AC028_RS13585 032c04c6e98550253304483bb9d61737 1066 Pfam PF01619 Proline dehydrogenase 210 501 6.0E-91 T 05-07-2017 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 AC028_RS13585 032c04c6e98550253304483bb9d61737 1066 Gene3D G3DSA:1.10.2060.10 77 197 1.5E-49 T 05-07-2017 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AC028_RS13585 032c04c6e98550253304483bb9d61737 1066 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 543 1044 2.0E-211 T 05-07-2017 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AC028_RS13585 032c04c6e98550253304483bb9d61737 1066 Gene3D G3DSA:3.20.20.220 199 543 1.3E-104 T 05-07-2017 IPR029041 FAD-linked oxidoreductase-like AC028_RS13585 032c04c6e98550253304483bb9d61737 1066 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 83 196 1.1E-44 T 05-07-2017 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AC028_RS13585 032c04c6e98550253304483bb9d61737 1066 SUPERFAMILY SSF51730 199 544 2.43E-113 T 05-07-2017 IPR029041 FAD-linked oxidoreductase-like AC028_RS13585 032c04c6e98550253304483bb9d61737 1066 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 848 859 - T 05-07-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AC028_RS13585 032c04c6e98550253304483bb9d61737 1066 PIRSF PIRSF000197 13 1062 0.0 T 05-07-2017 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AC028_RS13585 032c04c6e98550253304483bb9d61737 1066 Pfam PF00171 Aldehyde dehydrogenase family 589 1048 3.5E-116 T 05-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AC028_RS13585 032c04c6e98550253304483bb9d61737 1066 SUPERFAMILY SSF81935 27 198 1.44E-63 T 05-07-2017 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AC028_RS13585 032c04c6e98550253304483bb9d61737 1066 Gene3D G3DSA:3.40.309.10 836 1023 3.6E-42 T 05-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AC028_RS13585 032c04c6e98550253304483bb9d61737 1066 Gene3D G3DSA:1.20.5.550 27 76 2.6E-18 T 05-07-2017 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AC028_RS13585 032c04c6e98550253304483bb9d61737 1066 Gene3D G3DSA:3.40.605.10 589 835 1.5E-71 T 05-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AC028_RS18120 85c7f5a7e9bb796fd48850094f979c0d 889 SMART SM00304 524 577 100.0 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18120 85c7f5a7e9bb796fd48850094f979c0d 889 SMART SM00304 349 401 4.5E-4 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18120 85c7f5a7e9bb796fd48850094f979c0d 889 SMART SM00304 622 675 37.0 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18120 85c7f5a7e9bb796fd48850094f979c0d 889 Gene3D G3DSA:3.30.450.20 186 324 7.1E-6 T 05-07-2017 AC028_RS18120 85c7f5a7e9bb796fd48850094f979c0d 889 Gene3D G3DSA:3.30.450.20 412 522 2.5E-4 T 05-07-2017 AC028_RS18120 85c7f5a7e9bb796fd48850094f979c0d 889 SMART SM00283 623 870 1.8E-86 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18120 85c7f5a7e9bb796fd48850094f979c0d 889 Pfam PF00672 HAMP domain 329 397 8.8E-8 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18120 85c7f5a7e9bb796fd48850094f979c0d 889 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 691 869 5.1E-59 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18120 85c7f5a7e9bb796fd48850094f979c0d 889 SUPERFAMILY SSF58104 590 871 2.88E-70 T 05-07-2017 AC028_RS18120 85c7f5a7e9bb796fd48850094f979c0d 889 Gene3D G3DSA:1.10.287.950 638 842 2.0E-60 T 05-07-2017 AC028_RS18120 85c7f5a7e9bb796fd48850094f979c0d 889 SUPERFAMILY SSF103190 115 212 1.96E-12 T 05-07-2017 IPR029151 Periplasmic sensor domain-like AC028_RS18120 85c7f5a7e9bb796fd48850094f979c0d 889 Pfam PF17201 Cache 3/Cache 2 fusion domain 34 325 5.5E-76 T 05-07-2017 IPR033462 Cache 3/Cache 2 fusion domain AC028_RS18120 85c7f5a7e9bb796fd48850094f979c0d 889 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 644 673 7.4E-58 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18120 85c7f5a7e9bb796fd48850094f979c0d 889 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 721 748 7.4E-58 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18120 85c7f5a7e9bb796fd48850094f979c0d 889 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 332 357 7.4E-58 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18120 85c7f5a7e9bb796fd48850094f979c0d 889 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 750 779 7.4E-58 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18120 85c7f5a7e9bb796fd48850094f979c0d 889 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 798 827 7.4E-58 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18120 85c7f5a7e9bb796fd48850094f979c0d 889 SUPERFAMILY SSF158472 350 398 7.72E-7 T 05-07-2017 AC028_RS13335 f824ffa9a717f77ccd369a7c455735de 855 Gene3D G3DSA:3.20.20.80 369 650 6.8E-78 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS13335 f824ffa9a717f77ccd369a7c455735de 855 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 373 447 3.0E-15 T 05-07-2017 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS13335 f824ffa9a717f77ccd369a7c455735de 855 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 453 536 1.6E-10 T 05-07-2017 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS13335 f824ffa9a717f77ccd369a7c455735de 855 SUPERFAMILY SSF49303 259 364 6.62E-16 T 05-07-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AC028_RS13335 f824ffa9a717f77ccd369a7c455735de 855 Pfam PF00703 Glycosyl hydrolases family 2 254 364 2.2E-15 T 05-07-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AC028_RS13335 f824ffa9a717f77ccd369a7c455735de 855 Gene3D G3DSA:2.60.120.260 51 241 1.8E-42 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS13335 f824ffa9a717f77ccd369a7c455735de 855 PRINTS PR00132 Glycosyl hydrolase family 2 signature 465 480 2.1E-6 T 05-07-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 AC028_RS13335 f824ffa9a717f77ccd369a7c455735de 855 PRINTS PR00132 Glycosyl hydrolase family 2 signature 376 390 2.1E-6 T 05-07-2017 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 AC028_RS13335 f824ffa9a717f77ccd369a7c455735de 855 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 68 249 7.0E-17 T 05-07-2017 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS13335 f824ffa9a717f77ccd369a7c455735de 855 SUPERFAMILY SSF51445 370 652 2.16E-71 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS13335 f824ffa9a717f77ccd369a7c455735de 855 SUPERFAMILY SSF49785 57 250 8.63E-40 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS13335 f824ffa9a717f77ccd369a7c455735de 855 Pfam PF16355 Domain of unknown function (DUF4982) 673 727 1.4E-14 T 05-07-2017 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS13335 f824ffa9a717f77ccd369a7c455735de 855 Gene3D G3DSA:2.60.40.320 242 365 3.4E-27 T 05-07-2017 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 AC028_RS13335 f824ffa9a717f77ccd369a7c455735de 855 Gene3D G3DSA:2.60.40.1560 653 746 5.3E-22 T 05-07-2017 AC028_RS05945 4701c25f001ee22b1e3e544ce921a369 518 Pfam PF00962 Adenosine/AMP deaminase 317 458 1.8E-22 T 05-07-2017 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AC028_RS05945 4701c25f001ee22b1e3e544ce921a369 518 Gene3D G3DSA:3.20.20.140 128 463 1.1E-68 T 05-07-2017 AC028_RS05945 4701c25f001ee22b1e3e544ce921a369 518 Gene3D G3DSA:3.20.20.140 57 95 1.1E-68 T 05-07-2017 AC028_RS05945 4701c25f001ee22b1e3e544ce921a369 518 SUPERFAMILY SSF51556 135 188 1.48E-62 T 05-07-2017 IPR032466 Metal-dependent hydrolase AC028_RS05945 4701c25f001ee22b1e3e544ce921a369 518 SUPERFAMILY SSF51556 219 470 1.48E-62 T 05-07-2017 IPR032466 Metal-dependent hydrolase AC028_RS05945 4701c25f001ee22b1e3e544ce921a369 518 SUPERFAMILY SSF51556 43 108 1.48E-62 T 05-07-2017 IPR032466 Metal-dependent hydrolase AC028_RS08230 f74ff579ba65da87cc2cb589abae6062 640 SMART SM00563 469 585 1.9E-28 T 05-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AC028_RS08230 f74ff579ba65da87cc2cb589abae6062 640 Gene3D G3DSA:3.40.1130.10 455 614 1.5E-17 T 05-07-2017 AC028_RS08230 f74ff579ba65da87cc2cb589abae6062 640 Pfam PF07690 Major Facilitator Superfamily 24 386 5.8E-18 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS08230 f74ff579ba65da87cc2cb589abae6062 640 SUPERFAMILY SSF103473 10 438 1.74E-25 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS08230 f74ff579ba65da87cc2cb589abae6062 640 Pfam PF01553 Acyltransferase 461 582 9.4E-25 T 05-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AC028_RS08230 f74ff579ba65da87cc2cb589abae6062 640 Gene3D G3DSA:1.20.1250.20 233 437 5.0E-5 T 05-07-2017 AC028_RS08230 f74ff579ba65da87cc2cb589abae6062 640 Gene3D G3DSA:1.20.1250.20 17 189 1.4E-10 T 05-07-2017 AC028_RS08230 f74ff579ba65da87cc2cb589abae6062 640 SUPERFAMILY SSF69593 426 586 5.49E-28 T 05-07-2017 AC028_RS19570 0d2a053c154bab582eb06e187711a713 542 Gene3D G3DSA:1.20.1250.20 17 203 1.7E-23 T 05-07-2017 AC028_RS19570 0d2a053c154bab582eb06e187711a713 542 Gene3D G3DSA:1.20.1250.20 237 399 1.4E-14 T 05-07-2017 AC028_RS19570 0d2a053c154bab582eb06e187711a713 542 Pfam PF05977 Transmembrane secretion effector 11 527 2.5E-180 T 05-07-2017 IPR010290 Transmembrane secretion effector AC028_RS19570 0d2a053c154bab582eb06e187711a713 542 SUPERFAMILY SSF103473 19 401 2.22E-49 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS13550 05a86d55d826315b42ab864779396ec8 404 Gene3D G3DSA:3.40.50.620 10 227 5.9E-85 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS13550 05a86d55d826315b42ab864779396ec8 404 Gene3D G3DSA:1.10.240.10 228 322 3.7E-27 T 05-07-2017 AC028_RS13550 05a86d55d826315b42ab864779396ec8 404 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 7 399 3.6E-111 T 05-07-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AC028_RS13550 05a86d55d826315b42ab864779396ec8 404 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 05-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS13550 05a86d55d826315b42ab864779396ec8 404 SUPERFAMILY SSF55174 332 400 1.47E-15 T 05-07-2017 AC028_RS13550 05a86d55d826315b42ab864779396ec8 404 Gene3D G3DSA:3.10.290.10 332 399 7.4E-20 T 05-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AC028_RS13550 05a86d55d826315b42ab864779396ec8 404 SUPERFAMILY SSF52374 4 314 3.22E-89 T 05-07-2017 AC028_RS13550 05a86d55d826315b42ab864779396ec8 404 Pfam PF00579 tRNA synthetases class I (W and Y) 32 312 6.9E-72 T 05-07-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS13550 05a86d55d826315b42ab864779396ec8 404 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.5E-25 T 05-07-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AC028_RS13550 05a86d55d826315b42ab864779396ec8 404 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.5E-25 T 05-07-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AC028_RS13550 05a86d55d826315b42ab864779396ec8 404 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.5E-25 T 05-07-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AC028_RS13550 05a86d55d826315b42ab864779396ec8 404 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.5E-25 T 05-07-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AC028_RS13550 05a86d55d826315b42ab864779396ec8 404 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 400 45.917 T 05-07-2017 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 AC028_RS12695 7decf4b68a7bd953063f7b7ceccebdd5 201 SUPERFAMILY SSF46785 3 68 1.19E-12 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS12695 7decf4b68a7bd953063f7b7ceccebdd5 201 Gene3D G3DSA:1.10.10.10 1 67 1.3E-17 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS12695 7decf4b68a7bd953063f7b7ceccebdd5 201 TIGRFAM TIGR00498 lexA: repressor LexA 7 200 1.3E-50 T 05-07-2017 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AC028_RS12695 7decf4b68a7bd953063f7b7ceccebdd5 201 SUPERFAMILY SSF51306 78 199 5.76E-33 T 05-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C AC028_RS12695 7decf4b68a7bd953063f7b7ceccebdd5 201 Gene3D G3DSA:2.10.109.10 79 200 2.1E-38 T 05-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AC028_RS12695 7decf4b68a7bd953063f7b7ceccebdd5 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 114 124 1.4E-10 T 05-07-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AC028_RS12695 7decf4b68a7bd953063f7b7ceccebdd5 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 125 136 1.4E-10 T 05-07-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AC028_RS12695 7decf4b68a7bd953063f7b7ceccebdd5 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 153 165 1.4E-10 T 05-07-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AC028_RS12695 7decf4b68a7bd953063f7b7ceccebdd5 201 Pfam PF01726 LexA DNA binding domain 3 64 6.7E-12 T 05-07-2017 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AC028_RS12695 7decf4b68a7bd953063f7b7ceccebdd5 201 Pfam PF00717 Peptidase S24-like 117 182 2.5E-15 T 05-07-2017 IPR019759 Peptidase S24/S26A/S26B AC028_RS12695 7decf4b68a7bd953063f7b7ceccebdd5 201 Hamap MF_00015 LexA repressor [lexA]. 3 201 27.711 T 05-07-2017 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AC028_RS06085 31e2ab15443a8697e29c5284c3b7c98c 342 SUPERFAMILY SSF51726 4 338 4.97E-67 T 05-07-2017 AC028_RS06085 31e2ab15443a8697e29c5284c3b7c98c 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 1.6E-36 T 05-07-2017 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AC028_RS06085 31e2ab15443a8697e29c5284c3b7c98c 342 PIRSF PIRSF005632 1 342 2.1E-196 T 05-07-2017 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit AC028_RS06085 31e2ab15443a8697e29c5284c3b7c98c 342 Gene3D G3DSA:3.20.20.210 2 341 5.5E-89 T 05-07-2017 AC028_RS07615 7527357fb1a7ef5b81fbe19add443f61 259 Gene3D G3DSA:3.60.10.10 1 254 7.0E-81 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS07615 7527357fb1a7ef5b81fbe19add443f61 259 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 211 222 - T 05-07-2017 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 AC028_RS07615 7527357fb1a7ef5b81fbe19add443f61 259 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 05-07-2017 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AC028_RS07615 7527357fb1a7ef5b81fbe19add443f61 259 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 253 7.7E-80 T 05-07-2017 AC028_RS07615 7527357fb1a7ef5b81fbe19add443f61 259 SUPERFAMILY SSF56219 1 254 2.36E-75 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS07615 7527357fb1a7ef5b81fbe19add443f61 259 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 254 4.7E-74 T 05-07-2017 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AC028_RS07615 7527357fb1a7ef5b81fbe19add443f61 259 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 247 4.0E-24 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS06015 4a98de973e40a403ea8aebbb0cc74dd2 292 SUPERFAMILY SSF51735 1 160 5.52E-39 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS06015 4a98de973e40a403ea8aebbb0cc74dd2 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 280 7.1E-16 T 05-07-2017 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AC028_RS06015 4a98de973e40a403ea8aebbb0cc74dd2 292 Gene3D G3DSA:1.10.1040.10 164 289 9.3E-28 T 05-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AC028_RS06015 4a98de973e40a403ea8aebbb0cc74dd2 292 PIRSF PIRSF000103 1 292 1.6E-75 T 05-07-2017 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AC028_RS06015 4a98de973e40a403ea8aebbb0cc74dd2 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 159 1.3E-35 T 05-07-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AC028_RS06015 4a98de973e40a403ea8aebbb0cc74dd2 292 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 05-07-2017 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AC028_RS06015 4a98de973e40a403ea8aebbb0cc74dd2 292 SUPERFAMILY SSF48179 165 283 1.63E-24 T 05-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AC028_RS06015 4a98de973e40a403ea8aebbb0cc74dd2 292 Gene3D G3DSA:3.40.50.720 1 160 1.1E-44 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS15455 77cbf56a625773c6de43f3249df7fc37 240 Gene3D G3DSA:3.40.1160.10 3 237 1.0E-85 T 05-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AC028_RS15455 77cbf56a625773c6de43f3249df7fc37 240 PIRSF PIRSF005650 1 240 3.0E-94 T 05-07-2017 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 AC028_RS15455 77cbf56a625773c6de43f3249df7fc37 240 SUPERFAMILY SSF53633 5 236 4.19E-73 T 05-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AC028_RS15455 77cbf56a625773c6de43f3249df7fc37 240 Pfam PF00696 Amino acid kinase family 8 215 8.6E-30 T 05-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AC028_RS15455 77cbf56a625773c6de43f3249df7fc37 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 3.3E-98 T 05-07-2017 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AC028_RS15455 77cbf56a625773c6de43f3249df7fc37 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 45.185 T 05-07-2017 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AC028_RS20320 9daaee841bab599898d0eef434d86c06 629 Gene3D G3DSA:3.40.50.300 4 275 1.3E-49 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS20320 9daaee841bab599898d0eef434d86c06 629 Pfam PF16326 ABC transporter C-terminal domain 560 628 1.4E-20 T 05-07-2017 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AC028_RS20320 9daaee841bab599898d0eef434d86c06 629 Pfam PF12848 ABC transporter 219 294 1.3E-9 T 05-07-2017 IPR032781 ABC-transporter extension domain AC028_RS20320 9daaee841bab599898d0eef434d86c06 629 SUPERFAMILY SSF52540 308 511 7.86E-46 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS20320 9daaee841bab599898d0eef434d86c06 629 SUPERFAMILY SSF52540 3 94 1.07E-49 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS20320 9daaee841bab599898d0eef434d86c06 629 SUPERFAMILY SSF52540 121 230 1.07E-49 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS20320 9daaee841bab599898d0eef434d86c06 629 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS20320 9daaee841bab599898d0eef434d86c06 629 Pfam PF00005 ABC transporter 20 180 4.6E-26 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS20320 9daaee841bab599898d0eef434d86c06 629 Pfam PF00005 ABC transporter 331 464 2.9E-22 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS20320 9daaee841bab599898d0eef434d86c06 629 SMART SM00382 339 510 6.9E-15 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS20320 9daaee841bab599898d0eef434d86c06 629 SMART SM00382 28 225 1.0E-18 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS20320 9daaee841bab599898d0eef434d86c06 629 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS20320 9daaee841bab599898d0eef434d86c06 629 Gene3D G3DSA:3.40.50.300 312 522 7.5E-47 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19350 286f0156fb1b80eb066a50b2d65d8ce2 338 SUPERFAMILY SSF56349 44 221 1.27E-36 T 05-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AC028_RS19350 286f0156fb1b80eb066a50b2d65d8ce2 338 Pfam PF00589 Phage integrase family 49 211 8.5E-13 T 05-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AC028_RS19350 286f0156fb1b80eb066a50b2d65d8ce2 338 Gene3D G3DSA:1.10.443.10 14 214 1.9E-53 T 05-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AC028_RS03775 c7f204f81c564a888a56b984e778a556 188 Gene3D G3DSA:2.30.30.60 121 175 5.1E-8 T 05-07-2017 AC028_RS03775 c7f204f81c564a888a56b984e778a556 188 Pfam PF00924 Mechanosensitive ion channel 63 177 1.4E-14 T 05-07-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AC028_RS03775 c7f204f81c564a888a56b984e778a556 188 SUPERFAMILY SSF50182 106 179 4.25E-9 T 05-07-2017 IPR010920 LSM domain AC028_RS02575 8ec3969a5371bfa8a7a9c221584f2598 241 Gene3D G3DSA:3.30.230.70 9 238 2.8E-30 T 05-07-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AC028_RS02575 8ec3969a5371bfa8a7a9c221584f2598 241 SUPERFAMILY SSF54211 5 184 3.49E-45 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS02575 8ec3969a5371bfa8a7a9c221584f2598 241 SUPERFAMILY SSF55666 156 239 1.09E-24 T 05-07-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AC028_RS02575 8ec3969a5371bfa8a7a9c221584f2598 241 Hamap MF_00564 Ribonuclease PH [rph]. 4 240 50.004 T 05-07-2017 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 AC028_RS02575 8ec3969a5371bfa8a7a9c221584f2598 241 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 5 239 7.6E-115 T 05-07-2017 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 AC028_RS02575 8ec3969a5371bfa8a7a9c221584f2598 241 Pfam PF03725 3' exoribonuclease family, domain 2 161 227 1.8E-9 T 05-07-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AC028_RS02575 8ec3969a5371bfa8a7a9c221584f2598 241 ProSitePatterns PS01277 Ribonuclease PH signature. 119 132 - T 05-07-2017 IPR018336 Ribonuclease PH, conserved site AC028_RS02575 8ec3969a5371bfa8a7a9c221584f2598 241 Pfam PF01138 3' exoribonuclease family, domain 1 13 143 4.3E-22 T 05-07-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AC028_RS03110 c24925900a6250cd4cd9741570fadbd8 322 SUPERFAMILY SSF51445 49 301 5.07E-25 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS03110 c24925900a6250cd4cd9741570fadbd8 322 Gene3D G3DSA:3.20.20.80 197 302 5.4E-6 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS15300 64497ed32ed41c52ad793dd11f65a346 1198 Pfam PF12679 ABC-2 family transporter protein 6 205 5.4E-12 T 05-07-2017 IPR032688 ABC-2 family transporter protein GO:0006810 AC028_RS15300 64497ed32ed41c52ad793dd11f65a346 1198 Gene3D G3DSA:1.10.390.10 957 1081 2.4E-7 T 05-07-2017 AC028_RS15300 64497ed32ed41c52ad793dd11f65a346 1198 Pfam PF01433 Peptidase family M1 817 981 3.5E-10 T 05-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AC028_RS15300 64497ed32ed41c52ad793dd11f65a346 1198 SUPERFAMILY SSF55486 848 1080 3.42E-21 T 05-07-2017 AC028_RS06515 43c6498073b647f8d29fbd50c2439149 533 Gene3D G3DSA:2.60.40.10 415 531 6.3E-37 T 05-07-2017 IPR013783 Immunoglobulin-like fold AC028_RS06515 43c6498073b647f8d29fbd50c2439149 533 Gene3D G3DSA:2.70.98.10 42 414 2.3E-165 T 05-07-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 AC028_RS06515 43c6498073b647f8d29fbd50c2439149 533 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 532 62.99 T 05-07-2017 IPR023724 Glucan biosynthesis, MdoD AC028_RS06515 43c6498073b647f8d29fbd50c2439149 533 SUPERFAMILY SSF74650 43 412 2.2E-155 T 05-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AC028_RS06515 43c6498073b647f8d29fbd50c2439149 533 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 43 522 4.5E-195 T 05-07-2017 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 AC028_RS06515 43c6498073b647f8d29fbd50c2439149 533 PIRSF PIRSF006281 1 526 2.6E-208 T 05-07-2017 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D AC028_RS06515 43c6498073b647f8d29fbd50c2439149 533 SUPERFAMILY SSF81296 413 525 1.23E-28 T 05-07-2017 IPR014756 Immunoglobulin E-set AC028_RS14855 069ecb05efa71a1226c45bf0e6a4f0cc 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 447 9.0E-17 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS14855 069ecb05efa71a1226c45bf0e6a4f0cc 448 Gene3D G3DSA:3.30.565.10 316 447 3.9E-32 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS14855 069ecb05efa71a1226c45bf0e6a4f0cc 448 SUPERFAMILY SSF47384 231 305 2.55E-6 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS14855 069ecb05efa71a1226c45bf0e6a4f0cc 448 SMART SM00387 338 448 1.5E-26 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS14855 069ecb05efa71a1226c45bf0e6a4f0cc 448 SUPERFAMILY SSF55874 316 446 1.07E-31 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS14855 069ecb05efa71a1226c45bf0e6a4f0cc 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 445 2.1E-9 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS14855 069ecb05efa71a1226c45bf0e6a4f0cc 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 2.1E-9 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS14855 069ecb05efa71a1226c45bf0e6a4f0cc 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 2.1E-9 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS02075 83fa4accd168bf951212c73e70d9ceca 501 Gene3D G3DSA:3.40.50.1820 21 482 1.2E-127 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS02075 83fa4accd168bf951212c73e70d9ceca 501 Pfam PF00135 Carboxylesterase family 28 474 3.3E-100 T 05-07-2017 IPR002018 Carboxylesterase, type B AC028_RS02075 83fa4accd168bf951212c73e70d9ceca 501 SUPERFAMILY SSF53474 27 477 1.99E-114 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS02075 83fa4accd168bf951212c73e70d9ceca 501 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 200 215 - T 05-07-2017 IPR019826 Carboxylesterase type B, active site AC028_RS16480 9d6631a9273515cfec46cbf9c345924a 842 Pfam PF00773 RNB domain 360 687 5.5E-102 T 05-07-2017 AC028_RS16480 9d6631a9273515cfec46cbf9c345924a 842 SUPERFAMILY SSF50249 737 816 1.72E-18 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS16480 9d6631a9273515cfec46cbf9c345924a 842 TIGRFAM TIGR02063 RNase_R: ribonuclease R 121 817 1.4E-258 T 05-07-2017 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AC028_RS16480 9d6631a9273515cfec46cbf9c345924a 842 SMART SM00357 186 245 1.5E-11 T 05-07-2017 IPR011129 Cold shock protein GO:0003676 AC028_RS16480 9d6631a9273515cfec46cbf9c345924a 842 SUPERFAMILY SSF50249 325 734 6.28E-139 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS16480 9d6631a9273515cfec46cbf9c345924a 842 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 176 816 4.4E-208 T 05-07-2017 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AC028_RS16480 9d6631a9273515cfec46cbf9c345924a 842 Gene3D G3DSA:1.10.10.10 123 152 6.3E-4 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS16480 9d6631a9273515cfec46cbf9c345924a 842 ProSitePatterns PS01175 Ribonuclease II family signature. 655 679 - T 05-07-2017 IPR022966 Ribonuclease II/R, conserved site AC028_RS16480 9d6631a9273515cfec46cbf9c345924a 842 Gene3D G3DSA:2.40.50.140 738 817 6.9E-18 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS16480 9d6631a9273515cfec46cbf9c345924a 842 Pfam PF00575 S1 RNA binding domain 735 814 1.9E-11 T 05-07-2017 IPR003029 S1 domain GO:0003676 AC028_RS16480 9d6631a9273515cfec46cbf9c345924a 842 SMART SM00955 360 688 5.7E-174 T 05-07-2017 AC028_RS16480 9d6631a9273515cfec46cbf9c345924a 842 Hamap MF_01895 Ribonuclease R [rnr]. 140 817 57.091 T 05-07-2017 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AC028_RS16480 9d6631a9273515cfec46cbf9c345924a 842 SMART SM00316 734 817 1.9E-11 T 05-07-2017 IPR022967 RNA-binding domain, S1 AC028_RS16480 9d6631a9273515cfec46cbf9c345924a 842 Pfam PF08206 Ribonuclease B OB domain 187 244 5.5E-22 T 05-07-2017 IPR013223 Ribonuclease B, N-terminal OB domain AC028_RS16480 9d6631a9273515cfec46cbf9c345924a 842 SUPERFAMILY SSF50249 167 247 1.84E-16 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS16480 9d6631a9273515cfec46cbf9c345924a 842 SUPERFAMILY SSF50249 238 337 3.51E-11 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS20420 584a50640e85ff7500dbb4bbb5611eb4 495 Pfam PF01256 Carbohydrate kinase 247 485 2.5E-58 T 05-07-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AC028_RS20420 584a50640e85ff7500dbb4bbb5611eb4 495 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 9 209 23.298 T 05-07-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AC028_RS20420 584a50640e85ff7500dbb4bbb5611eb4 495 SUPERFAMILY SSF53613 226 488 1.06E-71 T 05-07-2017 IPR029056 Ribokinase-like AC028_RS20420 584a50640e85ff7500dbb4bbb5611eb4 495 Pfam PF03853 YjeF-related protein N-terminus 30 187 2.6E-39 T 05-07-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AC028_RS20420 584a50640e85ff7500dbb4bbb5611eb4 495 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 225 488 4.2E-71 T 05-07-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AC028_RS20420 584a50640e85ff7500dbb4bbb5611eb4 495 Gene3D G3DSA:3.40.1190.20 232 488 6.6E-82 T 05-07-2017 IPR029056 Ribokinase-like AC028_RS20420 584a50640e85ff7500dbb4bbb5611eb4 495 Gene3D G3DSA:3.40.50.10260 6 231 1.3E-60 T 05-07-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AC028_RS20420 584a50640e85ff7500dbb4bbb5611eb4 495 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 314 324 - T 05-07-2017 IPR017953 Carbohydrate kinase, predicted, conserved site AC028_RS20420 584a50640e85ff7500dbb4bbb5611eb4 495 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 13 209 3.9E-41 T 05-07-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AC028_RS20420 584a50640e85ff7500dbb4bbb5611eb4 495 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 224 494 22.1 T 05-07-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AC028_RS20420 584a50640e85ff7500dbb4bbb5611eb4 495 PIRSF PIRSF017184 5 492 8.2E-126 T 05-07-2017 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AC028_RS20420 584a50640e85ff7500dbb4bbb5611eb4 495 SUPERFAMILY SSF64153 6 245 3.27E-58 T 05-07-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AC028_RS05535 5d6ce6fc3008b9e6abcbf2c36500495d 548 ProSitePatterns PS00455 Putative AMP-binding domain signature. 178 189 - T 05-07-2017 IPR020845 AMP-binding, conserved site AC028_RS05535 5d6ce6fc3008b9e6abcbf2c36500495d 548 Pfam PF00501 AMP-binding enzyme 15 444 7.1E-63 T 05-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AC028_RS05535 5d6ce6fc3008b9e6abcbf2c36500495d 548 Gene3D G3DSA:3.40.50.980 183 329 2.2E-24 T 05-07-2017 AC028_RS05535 5d6ce6fc3008b9e6abcbf2c36500495d 548 Gene3D G3DSA:2.30.38.10 347 437 2.5E-13 T 05-07-2017 AC028_RS05535 5d6ce6fc3008b9e6abcbf2c36500495d 548 Gene3D G3DSA:3.30.300.30 452 543 1.8E-4 T 05-07-2017 AC028_RS05535 5d6ce6fc3008b9e6abcbf2c36500495d 548 SUPERFAMILY SSF56801 7 541 2.22E-88 T 05-07-2017 AC028_RS05535 5d6ce6fc3008b9e6abcbf2c36500495d 548 Gene3D G3DSA:3.40.50.980 10 182 2.1E-34 T 05-07-2017 AC028_RS10470 361ab3342aae668ceec56aea20e5cdd3 369 Gene3D G3DSA:3.40.140.10 11 137 7.8E-33 T 05-07-2017 AC028_RS10470 361ab3342aae668ceec56aea20e5cdd3 369 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 11 108 4.2E-18 T 05-07-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 AC028_RS10470 361ab3342aae668ceec56aea20e5cdd3 369 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 97 - T 05-07-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AC028_RS10470 361ab3342aae668ceec56aea20e5cdd3 369 Pfam PF01872 RibD C-terminal domain 156 359 4.8E-47 T 05-07-2017 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AC028_RS10470 361ab3342aae668ceec56aea20e5cdd3 369 PIRSF PIRSF006769 8 367 8.1E-122 T 05-07-2017 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 AC028_RS10470 361ab3342aae668ceec56aea20e5cdd3 369 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 16 360 6.0E-113 T 05-07-2017 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 AC028_RS10470 361ab3342aae668ceec56aea20e5cdd3 369 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 155 363 2.0E-54 T 05-07-2017 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 AC028_RS10470 361ab3342aae668ceec56aea20e5cdd3 369 SUPERFAMILY SSF53597 154 362 1.35E-57 T 05-07-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AC028_RS10470 361ab3342aae668ceec56aea20e5cdd3 369 Gene3D G3DSA:3.40.430.10 138 364 1.3E-68 T 05-07-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AC028_RS10470 361ab3342aae668ceec56aea20e5cdd3 369 SUPERFAMILY SSF53927 12 153 3.72E-46 T 05-07-2017 IPR016193 Cytidine deaminase-like GO:0003824 AC028_RS03750 445186e3b609b3511c3e73b4f83a2aa0 337 Pfam PF01545 Cation efflux family 30 233 1.3E-31 T 05-07-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AC028_RS03750 445186e3b609b3511c3e73b4f83a2aa0 337 Gene3D G3DSA:1.20.1510.10 27 236 2.0E-35 T 05-07-2017 IPR027469 Cation efflux protein transmembrane domain AC028_RS03750 445186e3b609b3511c3e73b4f83a2aa0 337 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 28 319 2.1E-42 T 05-07-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AC028_RS03750 445186e3b609b3511c3e73b4f83a2aa0 337 SUPERFAMILY SSF160240 243 313 9.29E-5 T 05-07-2017 AC028_RS03750 445186e3b609b3511c3e73b4f83a2aa0 337 SUPERFAMILY SSF161111 25 238 3.53E-42 T 05-07-2017 AC028_RS11270 8b8f9da87a1f5fc9f283bfb68d5ee662 235 SUPERFAMILY SSF55781 22 147 2.4E-6 T 05-07-2017 IPR029016 GAF domain-like AC028_RS11270 8b8f9da87a1f5fc9f283bfb68d5ee662 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 188 1.5E-12 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS11270 8b8f9da87a1f5fc9f283bfb68d5ee662 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 204 1.5E-12 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS11270 8b8f9da87a1f5fc9f283bfb68d5ee662 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 204 216 1.5E-12 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS11270 8b8f9da87a1f5fc9f283bfb68d5ee662 235 SMART SM00421 171 228 5.6E-23 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS11270 8b8f9da87a1f5fc9f283bfb68d5ee662 235 Gene3D G3DSA:3.30.450.40 15 171 1.3E-13 T 05-07-2017 IPR029016 GAF domain-like AC028_RS11270 8b8f9da87a1f5fc9f283bfb68d5ee662 235 SUPERFAMILY SSF46894 165 233 7.82E-20 T 05-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AC028_RS11270 8b8f9da87a1f5fc9f283bfb68d5ee662 235 Gene3D G3DSA:1.10.10.10 172 233 1.7E-24 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS11270 8b8f9da87a1f5fc9f283bfb68d5ee662 235 Pfam PF00196 Bacterial regulatory proteins, luxR family 173 228 2.8E-19 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS17535 ff738f854138ee738a532398283b82d3 638 SUPERFAMILY SSF49785 249 366 1.46E-18 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS17535 ff738f854138ee738a532398283b82d3 638 Gene3D G3DSA:2.60.120.260 245 360 4.5E-18 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS17535 ff738f854138ee738a532398283b82d3 638 Pfam PF13364 Beta-galactosidase jelly roll domain 251 356 1.3E-7 T 05-07-2017 IPR025300 Beta-galactosidase jelly roll domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024096|Reactome: R-HSA-2206308|Reactome: R-HSA-4085001 AC028_RS17535 ff738f854138ee738a532398283b82d3 638 SUPERFAMILY SSF52266 105 208 1.92E-73 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS17535 ff738f854138ee738a532398283b82d3 638 SUPERFAMILY SSF52266 403 589 1.92E-73 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS17535 ff738f854138ee738a532398283b82d3 638 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 106 529 7.7E-89 T 05-07-2017 IPR005181 Sialate O-acetylesterase domain AC028_RS11245 55018bed29e9084810511593eaac74d5 579 PRINTS PR00987 Glutamyl-tRNA synthetase signature 67 80 8.0E-8 T 05-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AC028_RS11245 55018bed29e9084810511593eaac74d5 579 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 50 8.0E-8 T 05-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AC028_RS11245 55018bed29e9084810511593eaac74d5 579 PRINTS PR00987 Glutamyl-tRNA synthetase signature 216 226 8.0E-8 T 05-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AC028_RS11245 55018bed29e9084810511593eaac74d5 579 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 35 579 3.5E-201 T 05-07-2017 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AC028_RS11245 55018bed29e9084810511593eaac74d5 579 SUPERFAMILY SSF52374 19 361 7.19E-89 T 05-07-2017 AC028_RS11245 55018bed29e9084810511593eaac74d5 579 Gene3D G3DSA:3.40.50.620 218 261 1.9E-37 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS11245 55018bed29e9084810511593eaac74d5 579 Gene3D G3DSA:3.40.50.620 35 103 1.9E-37 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS11245 55018bed29e9084810511593eaac74d5 579 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 364 556 3.8E-55 T 05-07-2017 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AC028_RS11245 55018bed29e9084810511593eaac74d5 579 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 35 259 2.0E-75 T 05-07-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AC028_RS11245 55018bed29e9084810511593eaac74d5 579 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 277 360 7.1E-16 T 05-07-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AC028_RS11245 55018bed29e9084810511593eaac74d5 579 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 577 52.446 T 05-07-2017 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 AC028_RS11245 55018bed29e9084810511593eaac74d5 579 Gene3D G3DSA:3.90.800.10 107 215 3.2E-40 T 05-07-2017 AC028_RS11245 55018bed29e9084810511593eaac74d5 579 Gene3D G3DSA:1.10.1160.10 285 361 1.4E-35 T 05-07-2017 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AC028_RS11245 55018bed29e9084810511593eaac74d5 579 Gene3D G3DSA:2.40.240.10 372 486 3.4E-43 T 05-07-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AC028_RS11245 55018bed29e9084810511593eaac74d5 579 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 52 - T 05-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS11245 55018bed29e9084810511593eaac74d5 579 SUPERFAMILY SSF50715 364 575 8.89E-70 T 05-07-2017 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AC028_RS11245 55018bed29e9084810511593eaac74d5 579 Gene3D G3DSA:2.40.240.10 487 575 2.4E-30 T 05-07-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AC028_RS15230 ccde563fdc547c421f9e3fe00137659b 448 SUPERFAMILY SSF53738 151 253 9.42E-28 T 05-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS15230 ccde563fdc547c421f9e3fe00137659b 448 Gene3D G3DSA:3.40.120.10 169 246 1.7E-27 T 05-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS15230 ccde563fdc547c421f9e3fe00137659b 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 255 365 2.7E-24 T 05-07-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS15230 ccde563fdc547c421f9e3fe00137659b 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 151 250 6.4E-22 T 05-07-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS15230 ccde563fdc547c421f9e3fe00137659b 448 SUPERFAMILY SSF53738 4 174 1.02E-34 T 05-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS15230 ccde563fdc547c421f9e3fe00137659b 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 201 214 2.2E-28 T 05-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS15230 ccde563fdc547c421f9e3fe00137659b 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 230 245 2.2E-28 T 05-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS15230 ccde563fdc547c421f9e3fe00137659b 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 167 186 2.2E-28 T 05-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS15230 ccde563fdc547c421f9e3fe00137659b 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 90 104 2.2E-28 T 05-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS15230 ccde563fdc547c421f9e3fe00137659b 448 SUPERFAMILY SSF55957 364 447 6.1E-19 T 05-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS15230 ccde563fdc547c421f9e3fe00137659b 448 SUPERFAMILY SSF53738 255 359 3.92E-31 T 05-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS15230 ccde563fdc547c421f9e3fe00137659b 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 131 2.3E-34 T 05-07-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS15230 ccde563fdc547c421f9e3fe00137659b 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 370 446 1.3E-10 T 05-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS15230 ccde563fdc547c421f9e3fe00137659b 448 Gene3D G3DSA:3.30.310.50 367 447 9.8E-17 T 05-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS15230 ccde563fdc547c421f9e3fe00137659b 448 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 91 100 - T 05-07-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS15230 ccde563fdc547c421f9e3fe00137659b 448 Gene3D G3DSA:3.40.120.10 5 120 2.1E-33 T 05-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS15230 ccde563fdc547c421f9e3fe00137659b 448 Gene3D G3DSA:3.40.120.10 247 360 3.2E-38 T 05-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS21870 fdf35c72b13f29b2dbb2c3f3427b4f61 231 Gene3D G3DSA:1.20.1540.10 4 206 2.0E-45 T 05-07-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AC028_RS21870 fdf35c72b13f29b2dbb2c3f3427b4f61 231 SMART SM01160 56 145 7.8E-6 T 05-07-2017 AC028_RS21870 fdf35c72b13f29b2dbb2c3f3427b4f61 231 SUPERFAMILY SSF144091 3 206 5.62E-45 T 05-07-2017 AC028_RS21870 fdf35c72b13f29b2dbb2c3f3427b4f61 231 Pfam PF01694 Rhomboid family 59 208 7.3E-40 T 05-07-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AC028_RS00665 b0001614eaf55d379d04813d68e2adbf 505 Pfam PF04820 Tryptophan halogenase 8 457 6.2E-192 T 05-07-2017 IPR006905 Tryptophan halogenase AC028_RS00665 b0001614eaf55d379d04813d68e2adbf 505 Gene3D G3DSA:3.50.50.60 150 230 2.1E-49 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS00665 b0001614eaf55d379d04813d68e2adbf 505 Gene3D G3DSA:3.50.50.60 312 356 2.1E-49 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS00665 b0001614eaf55d379d04813d68e2adbf 505 Gene3D G3DSA:3.50.50.60 5 75 2.1E-49 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS00665 b0001614eaf55d379d04813d68e2adbf 505 PIRSF PIRSF011396 1 494 4.3E-183 T 05-07-2017 IPR006905 Tryptophan halogenase AC028_RS00665 b0001614eaf55d379d04813d68e2adbf 505 SUPERFAMILY SSF51905 317 405 6.75E-28 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS00665 b0001614eaf55d379d04813d68e2adbf 505 SUPERFAMILY SSF51905 134 232 6.75E-28 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS00665 b0001614eaf55d379d04813d68e2adbf 505 SUPERFAMILY SSF51905 7 90 6.75E-28 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS08640 dd9a0f32bed7e1c359fb61be537fb544 205 Gene3D G3DSA:3.40.50.360 1 195 3.7E-43 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS08640 dd9a0f32bed7e1c359fb61be537fb544 205 Pfam PF02525 Flavodoxin-like fold 1 170 5.2E-44 T 05-07-2017 IPR003680 Flavodoxin-like fold AC028_RS08640 dd9a0f32bed7e1c359fb61be537fb544 205 SUPERFAMILY SSF52218 1 195 3.42E-47 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS14720 376535891d7e893ac1cb668674545eee 231 SUPERFAMILY SSF161098 20 220 1.31E-40 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS14720 376535891d7e893ac1cb668674545eee 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 56 231 1.1E-20 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS14720 376535891d7e893ac1cb668674545eee 231 Gene3D G3DSA:1.10.3720.10 18 227 7.5E-37 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS10260 a9d3d08b3b5da48a88747a465850f217 798 Pfam PF05089 Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain 127 489 4.2E-133 T 05-07-2017 IPR024733 Alpha-N-acetylglucosaminidase, tim-barrel domain KEGG: 00531+3.2.1.50|Reactome: R-HSA-2024096|Reactome: R-HSA-2206282 AC028_RS10260 a9d3d08b3b5da48a88747a465850f217 798 SUPERFAMILY SSF47240 253 420 1.7E-5 T 05-07-2017 IPR009078 Ferritin-like superfamily AC028_RS10260 a9d3d08b3b5da48a88747a465850f217 798 Pfam PF12971 Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain 34 114 9.1E-19 T 05-07-2017 IPR024240 Alpha-N-acetylglucosaminidase, N-terminal KEGG: 00531+3.2.1.50|Reactome: R-HSA-2024096|Reactome: R-HSA-2206282 AC028_RS10260 a9d3d08b3b5da48a88747a465850f217 798 Pfam PF12972 Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain 497 760 7.5E-48 T 05-07-2017 IPR024732 Alpha-N-acetylglucosaminidase, C-terminal KEGG: 00531+3.2.1.50|Reactome: R-HSA-2024096|Reactome: R-HSA-2206282 AC028_RS16595 d6b2ab371666001f0c36823d9e44757d 290 SUPERFAMILY SSF52821 162 289 4.71E-29 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS16595 d6b2ab371666001f0c36823d9e44757d 290 SUPERFAMILY SSF52821 4 150 1.7E-38 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS16595 d6b2ab371666001f0c36823d9e44757d 290 SMART SM00450 11 141 2.2E-19 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS16595 d6b2ab371666001f0c36823d9e44757d 290 SMART SM00450 165 284 3.4E-10 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS16595 d6b2ab371666001f0c36823d9e44757d 290 Pfam PF00581 Rhodanese-like domain 167 280 5.0E-8 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS16595 d6b2ab371666001f0c36823d9e44757d 290 Pfam PF00581 Rhodanese-like domain 14 137 4.8E-17 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS16595 d6b2ab371666001f0c36823d9e44757d 290 Gene3D G3DSA:3.40.250.10 161 289 3.5E-34 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS16595 d6b2ab371666001f0c36823d9e44757d 290 Gene3D G3DSA:3.40.250.10 2 153 1.1E-46 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS18025 30245d955d3905f228d62086144ba620 726 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 370 2.2E-13 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS18025 30245d955d3905f228d62086144ba620 726 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 395 2.2E-13 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS18025 30245d955d3905f228d62086144ba620 726 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 356 2.2E-13 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS18025 30245d955d3905f228d62086144ba620 726 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 414 2.2E-13 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS18025 30245d955d3905f228d62086144ba620 726 SMART SM00073 614 712 5.6E-20 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS18025 30245d955d3905f228d62086144ba620 726 SUPERFAMILY SSF52172 460 581 3.13E-32 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS18025 30245d955d3905f228d62086144ba620 726 Pfam PF00072 Response regulator receiver domain 465 577 3.8E-23 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS18025 30245d955d3905f228d62086144ba620 726 SMART SM00448 462 577 2.1E-32 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS18025 30245d955d3905f228d62086144ba620 726 SMART SM00388 188 253 3.4E-24 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS18025 30245d955d3905f228d62086144ba620 726 SUPERFAMILY SSF47384 171 254 4.32E-21 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS18025 30245d955d3905f228d62086144ba620 726 SUPERFAMILY SSF55874 243 415 3.8E-38 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS18025 30245d955d3905f228d62086144ba620 726 Gene3D G3DSA:1.10.287.130 180 248 1.6E-17 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS18025 30245d955d3905f228d62086144ba620 726 Gene3D G3DSA:3.30.565.10 254 416 1.8E-38 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS18025 30245d955d3905f228d62086144ba620 726 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 300 416 2.2E-24 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS18025 30245d955d3905f228d62086144ba620 726 SMART SM00387 300 417 1.7E-35 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS18025 30245d955d3905f228d62086144ba620 726 SUPERFAMILY SSF47226 602 712 2.36E-16 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS18025 30245d955d3905f228d62086144ba620 726 Pfam PF00512 His Kinase A (phospho-acceptor) domain 188 253 1.0E-18 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS18025 30245d955d3905f228d62086144ba620 726 Gene3D G3DSA:1.20.120.160 599 712 1.2E-11 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS18025 30245d955d3905f228d62086144ba620 726 Pfam PF01627 Hpt domain 625 700 5.4E-6 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS18025 30245d955d3905f228d62086144ba620 726 Gene3D G3DSA:3.40.50.2300 460 580 3.7E-33 T 05-07-2017 AC028_RS11565 0b6bad785e32ff2fb3fac6f74523c117 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 05-07-2017 IPR031157 Tr-type G domain, conserved site AC028_RS11565 0b6bad785e32ff2fb3fac6f74523c117 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 5.5E-14 T 05-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AC028_RS11565 0b6bad785e32ff2fb3fac6f74523c117 396 Gene3D G3DSA:2.40.30.10 214 300 3.3E-38 T 05-07-2017 AC028_RS11565 0b6bad785e32ff2fb3fac6f74523c117 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 5.4E-56 T 05-07-2017 AC028_RS11565 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS11565 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS11565 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS11565 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS11565 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS11565 0b6bad785e32ff2fb3fac6f74523c117 396 Gene3D G3DSA:3.40.50.300 5 213 1.4E-67 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11565 0b6bad785e32ff2fb3fac6f74523c117 396 Gene3D G3DSA:2.40.30.10 302 395 1.1E-46 T 05-07-2017 AC028_RS11565 0b6bad785e32ff2fb3fac6f74523c117 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.0E-33 T 05-07-2017 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AC028_RS11565 0b6bad785e32ff2fb3fac6f74523c117 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 1.8E-226 T 05-07-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AC028_RS11565 0b6bad785e32ff2fb3fac6f74523c117 396 SUPERFAMILY SSF50447 207 303 1.53E-32 T 05-07-2017 IPR009000 Translation protein, beta-barrel domain AC028_RS11565 0b6bad785e32ff2fb3fac6f74523c117 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.099 T 05-07-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AC028_RS11565 0b6bad785e32ff2fb3fac6f74523c117 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 4.6E-20 T 05-07-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AC028_RS11565 0b6bad785e32ff2fb3fac6f74523c117 396 SUPERFAMILY SSF52540 6 221 2.12E-59 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11565 0b6bad785e32ff2fb3fac6f74523c117 396 SUPERFAMILY SSF50465 300 395 8.63E-36 T 05-07-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AC028_RS11630 0b6bad785e32ff2fb3fac6f74523c117 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 05-07-2017 IPR031157 Tr-type G domain, conserved site AC028_RS11630 0b6bad785e32ff2fb3fac6f74523c117 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 5.5E-14 T 05-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AC028_RS11630 0b6bad785e32ff2fb3fac6f74523c117 396 Gene3D G3DSA:2.40.30.10 214 300 3.3E-38 T 05-07-2017 AC028_RS11630 0b6bad785e32ff2fb3fac6f74523c117 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 5.4E-56 T 05-07-2017 AC028_RS11630 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS11630 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS11630 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS11630 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS11630 0b6bad785e32ff2fb3fac6f74523c117 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS11630 0b6bad785e32ff2fb3fac6f74523c117 396 Gene3D G3DSA:3.40.50.300 5 213 1.4E-67 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11630 0b6bad785e32ff2fb3fac6f74523c117 396 Gene3D G3DSA:2.40.30.10 302 395 1.1E-46 T 05-07-2017 AC028_RS11630 0b6bad785e32ff2fb3fac6f74523c117 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.0E-33 T 05-07-2017 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AC028_RS11630 0b6bad785e32ff2fb3fac6f74523c117 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 1.8E-226 T 05-07-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AC028_RS11630 0b6bad785e32ff2fb3fac6f74523c117 396 SUPERFAMILY SSF50447 207 303 1.53E-32 T 05-07-2017 IPR009000 Translation protein, beta-barrel domain AC028_RS11630 0b6bad785e32ff2fb3fac6f74523c117 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.099 T 05-07-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AC028_RS11630 0b6bad785e32ff2fb3fac6f74523c117 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 4.6E-20 T 05-07-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AC028_RS11630 0b6bad785e32ff2fb3fac6f74523c117 396 SUPERFAMILY SSF52540 6 221 2.12E-59 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11630 0b6bad785e32ff2fb3fac6f74523c117 396 SUPERFAMILY SSF50465 300 395 8.63E-36 T 05-07-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AC028_RS03145 31e896abcf791718a23e9e8f7703f44e 720 Gene3D G3DSA:2.170.130.10 32 169 6.6E-20 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS03145 31e896abcf791718a23e9e8f7703f44e 720 SUPERFAMILY SSF56935 25 720 6.41E-99 T 05-07-2017 AC028_RS03145 31e896abcf791718a23e9e8f7703f44e 720 Gene3D G3DSA:2.40.170.20 173 720 2.1E-113 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS03145 31e896abcf791718a23e9e8f7703f44e 720 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 63 720 8.6E-171 T 05-07-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AC028_RS03145 31e896abcf791718a23e9e8f7703f44e 720 Pfam PF00593 TonB dependent receptor 478 718 7.6E-25 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS03145 31e896abcf791718a23e9e8f7703f44e 720 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 159 2.6E-7 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS03145 31e896abcf791718a23e9e8f7703f44e 720 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 703 720 - T 05-07-2017 IPR010917 TonB-dependent receptor, conserved site AC028_RS02555 69e5838d63682f1cb54d90a5e68e7143 723 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 46 718 4.6E-225 T 05-07-2017 IPR004811 RelA/SpoT family GO:0015969 AC028_RS02555 69e5838d63682f1cb54d90a5e68e7143 723 Pfam PF02824 TGS domain 408 467 2.5E-16 T 05-07-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 AC028_RS02555 69e5838d63682f1cb54d90a5e68e7143 723 Pfam PF04607 Region found in RelA / SpoT proteins 255 363 1.3E-32 T 05-07-2017 IPR007685 RelA/SpoT GO:0015969 AC028_RS02555 69e5838d63682f1cb54d90a5e68e7143 723 SUPERFAMILY SSF109604 26 210 2.32E-71 T 05-07-2017 AC028_RS02555 69e5838d63682f1cb54d90a5e68e7143 723 Gene3D G3DSA:3.30.460.10 198 344 1.3E-40 T 05-07-2017 AC028_RS02555 69e5838d63682f1cb54d90a5e68e7143 723 Gene3D G3DSA:3.30.70.260 648 720 1.4E-10 T 05-07-2017 AC028_RS02555 69e5838d63682f1cb54d90a5e68e7143 723 SMART SM00954 255 365 1.5E-58 T 05-07-2017 IPR007685 RelA/SpoT GO:0015969 AC028_RS02555 69e5838d63682f1cb54d90a5e68e7143 723 SUPERFAMILY SSF81271 395 467 1.24E-18 T 05-07-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AC028_RS02555 69e5838d63682f1cb54d90a5e68e7143 723 Pfam PF13328 HD domain 46 195 1.6E-51 T 05-07-2017 IPR003607 HD/PDEase domain AC028_RS02555 69e5838d63682f1cb54d90a5e68e7143 723 SMART SM00471 61 173 1.5E-10 T 05-07-2017 IPR003607 HD/PDEase domain AC028_RS02555 69e5838d63682f1cb54d90a5e68e7143 723 Pfam PF13291 ACT domain 646 722 4.2E-16 T 05-07-2017 IPR002912 ACT domain GO:0008152|GO:0016597 AC028_RS02555 69e5838d63682f1cb54d90a5e68e7143 723 SUPERFAMILY SSF55021 651 721 1.07E-7 T 05-07-2017 AC028_RS02555 69e5838d63682f1cb54d90a5e68e7143 723 Gene3D G3DSA:3.10.20.30 407 469 1.3E-19 T 05-07-2017 IPR012675 Beta-grasp domain AC028_RS02555 69e5838d63682f1cb54d90a5e68e7143 723 SUPERFAMILY SSF81301 201 412 5.4E-57 T 05-07-2017 AC028_RS05495 a7c7279158c633d1994be49bbcbd4df1 409 Gene3D G3DSA:1.20.1250.20 216 390 2.9E-14 T 05-07-2017 AC028_RS05495 a7c7279158c633d1994be49bbcbd4df1 409 SUPERFAMILY SSF103473 5 391 3.4E-37 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS05495 a7c7279158c633d1994be49bbcbd4df1 409 Gene3D G3DSA:1.20.1250.20 27 185 6.9E-16 T 05-07-2017 AC028_RS05495 a7c7279158c633d1994be49bbcbd4df1 409 Pfam PF07690 Major Facilitator Superfamily 26 291 5.3E-15 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS10280 976c60f8c4ec315d01d3bcc8834bebf1 355 SUPERFAMILY SSF47413 2 59 4.57E-17 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS10280 976c60f8c4ec315d01d3bcc8834bebf1 355 Gene3D G3DSA:3.40.50.2300 177 314 1.1E-49 T 05-07-2017 AC028_RS10280 976c60f8c4ec315d01d3bcc8834bebf1 355 Gene3D G3DSA:3.40.50.2300 53 176 9.5E-22 T 05-07-2017 AC028_RS10280 976c60f8c4ec315d01d3bcc8834bebf1 355 Pfam PF13377 Periplasmic binding protein-like domain 173 339 1.3E-34 T 05-07-2017 AC028_RS10280 976c60f8c4ec315d01d3bcc8834bebf1 355 SUPERFAMILY SSF53822 64 344 2.02E-63 T 05-07-2017 IPR028082 Periplasmic binding protein-like I AC028_RS10280 976c60f8c4ec315d01d3bcc8834bebf1 355 SMART SM00354 3 73 3.6E-25 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS10280 976c60f8c4ec315d01d3bcc8834bebf1 355 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 05-07-2017 AC028_RS10280 976c60f8c4ec315d01d3bcc8834bebf1 355 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 3.2E-18 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS10280 976c60f8c4ec315d01d3bcc8834bebf1 355 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 5.5E-5 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS10280 976c60f8c4ec315d01d3bcc8834bebf1 355 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 5.5E-5 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS10280 976c60f8c4ec315d01d3bcc8834bebf1 355 Gene3D G3DSA:1.10.260.40 2 52 2.7E-24 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS16305 9feb677fe21de8181d8d2cc5f7b10f21 444 Gene3D G3DSA:3.10.580.10 211 350 2.1E-16 T 05-07-2017 AC028_RS16305 9feb677fe21de8181d8d2cc5f7b10f21 444 Pfam PF03471 Transporter associated domain 360 436 2.3E-17 T 05-07-2017 IPR005170 Transporter-associated domain AC028_RS16305 9feb677fe21de8181d8d2cc5f7b10f21 444 Pfam PF00571 CBS domain 293 342 1.0E-5 T 05-07-2017 IPR000644 CBS domain AC028_RS16305 9feb677fe21de8181d8d2cc5f7b10f21 444 Pfam PF00571 CBS domain 222 279 0.0018 T 05-07-2017 IPR000644 CBS domain AC028_RS16305 9feb677fe21de8181d8d2cc5f7b10f21 444 SUPERFAMILY SSF56176 358 439 2.73E-17 T 05-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AC028_RS16305 9feb677fe21de8181d8d2cc5f7b10f21 444 SMART SM00116 231 280 15.0 T 05-07-2017 IPR000644 CBS domain AC028_RS16305 9feb677fe21de8181d8d2cc5f7b10f21 444 SMART SM00116 294 342 1.5 T 05-07-2017 IPR000644 CBS domain AC028_RS16305 9feb677fe21de8181d8d2cc5f7b10f21 444 SUPERFAMILY SSF54631 213 351 2.02E-23 T 05-07-2017 AC028_RS16305 9feb677fe21de8181d8d2cc5f7b10f21 444 Gene3D G3DSA:3.30.465.10 359 435 3.4E-19 T 05-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AC028_RS16305 9feb677fe21de8181d8d2cc5f7b10f21 444 Pfam PF01595 Domain of unknown function DUF21 13 195 1.8E-46 T 05-07-2017 IPR002550 Domain of unknown function DUF21 AC028_RS16305 9feb677fe21de8181d8d2cc5f7b10f21 444 SMART SM01091 358 437 3.8E-21 T 05-07-2017 IPR005170 Transporter-associated domain AC028_RS22170 2eb3b8e6a051a246250ee7868a0a5f54 168 Gene3D G3DSA:1.10.10.10 29 98 6.8E-9 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS22170 2eb3b8e6a051a246250ee7868a0a5f54 168 Pfam PF01475 Ferric uptake regulator family 35 157 1.7E-10 T 05-07-2017 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AC028_RS22170 2eb3b8e6a051a246250ee7868a0a5f54 168 SUPERFAMILY SSF46785 30 162 3.74E-27 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS10950 1143a1ad4173aae98fa6166308520cee 233 SUPERFAMILY SSF52266 33 232 3.51E-45 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS10950 1143a1ad4173aae98fa6166308520cee 233 Gene3D G3DSA:3.40.50.1110 36 232 7.8E-43 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS10950 1143a1ad4173aae98fa6166308520cee 233 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 72 221 6.7E-15 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS01225 632ba651d67aad8b4dc8e766fa618975 694 Gene3D G3DSA:3.90.550.10 72 308 9.2E-49 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS01225 632ba651d67aad8b4dc8e766fa618975 694 Pfam PF00535 Glycosyl transferase family 2 75 199 2.7E-26 T 05-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AC028_RS01225 632ba651d67aad8b4dc8e766fa618975 694 SUPERFAMILY SSF53448 62 292 1.17E-50 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS01225 632ba651d67aad8b4dc8e766fa618975 694 Pfam PF13692 Glycosyl transferases group 1 521 659 1.6E-26 T 05-07-2017 AC028_RS01225 632ba651d67aad8b4dc8e766fa618975 694 SUPERFAMILY SSF53756 347 690 4.76E-24 T 05-07-2017 AC028_RS19300 22f5186d4358c8f7e3653a688268dea4 140 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 45 121 7.5E-21 T 05-07-2017 IPR006260 TonB, C-terminal GO:0006810 AC028_RS19300 22f5186d4358c8f7e3653a688268dea4 140 SUPERFAMILY SSF74653 38 119 2.49E-20 T 05-07-2017 AC028_RS19300 22f5186d4358c8f7e3653a688268dea4 140 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 43 120 8.6E-22 T 05-07-2017 IPR006260 TonB, C-terminal GO:0006810 AC028_RS19300 22f5186d4358c8f7e3653a688268dea4 140 Gene3D G3DSA:3.30.1150.10 25 121 7.7E-16 T 05-07-2017 AC028_RS08855 a89064f63fe29bb60b3d318ec8704d9c 330 Gene3D G3DSA:3.40.50.300 27 197 2.4E-44 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS08855 a89064f63fe29bb60b3d318ec8704d9c 330 SUPERFAMILY SSF52540 16 302 2.57E-44 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS08855 a89064f63fe29bb60b3d318ec8704d9c 330 PIRSF PIRSF002849 1 330 2.6E-122 T 05-07-2017 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted AC028_RS08855 a89064f63fe29bb60b3d318ec8704d9c 330 Gene3D G3DSA:1.10.8.300 210 326 1.7E-33 T 05-07-2017 AC028_RS08855 a89064f63fe29bb60b3d318ec8704d9c 330 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 46 180 7.4E-63 T 05-07-2017 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AC028_RS15360 3300082c79367f1347ae9d74d3021a7b 438 Pfam PF06850 PHB de-polymerase C-terminus 214 415 5.9E-99 T 05-07-2017 IPR009656 PHB de-polymerase, C-terminal AC028_RS15360 3300082c79367f1347ae9d74d3021a7b 438 Gene3D G3DSA:3.40.50.1820 109 414 3.5E-11 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS15360 3300082c79367f1347ae9d74d3021a7b 438 PIRSF PIRSF020818 1 427 2.5E-199 T 05-07-2017 IPR010915 Polyhydroxyalkanoate depolymerase AC028_RS15360 3300082c79367f1347ae9d74d3021a7b 438 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 5 415 2.5E-207 T 05-07-2017 IPR010915 Polyhydroxyalkanoate depolymerase AC028_RS15360 3300082c79367f1347ae9d74d3021a7b 438 SUPERFAMILY SSF53474 109 412 8.51E-33 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS08485 90f4645e684292c9be2cd47c4cdeac14 493 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 30 135 3.2E-36 T 05-07-2017 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AC028_RS08485 90f4645e684292c9be2cd47c4cdeac14 493 Gene3D G3DSA:3.50.50.60 238 410 4.0E-46 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS08485 90f4645e684292c9be2cd47c4cdeac14 493 Gene3D G3DSA:1.10.1060.10 6 150 3.6E-41 T 05-07-2017 AC028_RS08485 90f4645e684292c9be2cd47c4cdeac14 493 SUPERFAMILY SSF51971 147 410 6.47E-67 T 05-07-2017 AC028_RS08485 90f4645e684292c9be2cd47c4cdeac14 493 PRINTS PR00419 Adrenodoxin reductase family signature 172 185 7.5E-29 T 05-07-2017 AC028_RS08485 90f4645e684292c9be2cd47c4cdeac14 493 PRINTS PR00419 Adrenodoxin reductase family signature 333 346 7.5E-29 T 05-07-2017 AC028_RS08485 90f4645e684292c9be2cd47c4cdeac14 493 PRINTS PR00419 Adrenodoxin reductase family signature 149 171 7.5E-29 T 05-07-2017 AC028_RS08485 90f4645e684292c9be2cd47c4cdeac14 493 PRINTS PR00419 Adrenodoxin reductase family signature 299 313 7.5E-29 T 05-07-2017 AC028_RS08485 90f4645e684292c9be2cd47c4cdeac14 493 SUPERFAMILY SSF46548 7 158 1.99E-36 T 05-07-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 AC028_RS08485 90f4645e684292c9be2cd47c4cdeac14 493 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 7 483 8.2E-242 T 05-07-2017 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 AC028_RS08485 90f4645e684292c9be2cd47c4cdeac14 493 Gene3D G3DSA:3.40.50.720 151 237 3.6E-33 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS08485 90f4645e684292c9be2cd47c4cdeac14 493 Gene3D G3DSA:3.40.50.720 414 490 3.6E-33 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS08485 90f4645e684292c9be2cd47c4cdeac14 493 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 149 470 5.1E-29 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS00710 ca1086a0ff610b2b9dd7d2933c649002 560 Gene3D G3DSA:1.10.390.10 320 462 4.0E-15 T 05-07-2017 AC028_RS00710 ca1086a0ff610b2b9dd7d2933c649002 560 SUPERFAMILY SSF55486 237 462 5.13E-38 T 05-07-2017 AC028_RS02250 06ae68a769741ff1c54332862c9ff859 334 SUPERFAMILY SSF51569 4 333 2.62E-130 T 05-07-2017 AC028_RS02250 06ae68a769741ff1c54332862c9ff859 334 ProSitePatterns PS00158 Fructose-bisphosphate aldolase class-I active site. 211 221 - T 05-07-2017 IPR029768 Fructose-bisphosphate aldolase class-I active site KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02250 06ae68a769741ff1c54332862c9ff859 334 Gene3D G3DSA:3.20.20.70 4 333 2.9E-146 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS02250 06ae68a769741ff1c54332862c9ff859 334 Pfam PF00274 Fructose-bisphosphate aldolase class-I 6 333 2.9E-137 T 05-07-2017 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS09480 1a7b7191def11402c4aeefad67e932ba 253 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 5 192 3.2E-73 T 05-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AC028_RS09480 1a7b7191def11402c4aeefad67e932ba 253 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 117 130 1.1E-26 T 05-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AC028_RS09480 1a7b7191def11402c4aeefad67e932ba 253 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 77 90 1.1E-26 T 05-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AC028_RS09480 1a7b7191def11402c4aeefad67e932ba 253 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 165 177 1.1E-26 T 05-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AC028_RS09480 1a7b7191def11402c4aeefad67e932ba 253 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 24 34 1.1E-26 T 05-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AC028_RS09480 1a7b7191def11402c4aeefad67e932ba 253 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 97 112 1.1E-26 T 05-07-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AC028_RS09480 1a7b7191def11402c4aeefad67e932ba 253 Pfam PF01514 Secretory protein of YscJ/FliF family 8 186 2.1E-28 T 05-07-2017 IPR006182 Secretory protein YscJ/FliF AC028_RS05370 2edfbb5f23f3ed2abefeb986803726fe 475 SUPERFAMILY SSF46689 400 468 3.54E-13 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS05370 2edfbb5f23f3ed2abefeb986803726fe 475 Pfam PF02954 Bacterial regulatory protein, Fis family 431 468 4.3E-9 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS05370 2edfbb5f23f3ed2abefeb986803726fe 475 Gene3D G3DSA:3.40.50.2300 9 127 2.2E-33 T 05-07-2017 AC028_RS05370 2edfbb5f23f3ed2abefeb986803726fe 475 Gene3D G3DSA:1.10.8.60 319 392 4.4E-23 T 05-07-2017 AC028_RS05370 2edfbb5f23f3ed2abefeb986803726fe 475 Gene3D G3DSA:1.10.10.60 405 468 6.9E-14 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS05370 2edfbb5f23f3ed2abefeb986803726fe 475 SMART SM00448 8 120 4.0E-30 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS05370 2edfbb5f23f3ed2abefeb986803726fe 475 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 10 469 2.4E-223 T 05-07-2017 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 AC028_RS05370 2edfbb5f23f3ed2abefeb986803726fe 475 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 05-07-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AC028_RS05370 2edfbb5f23f3ed2abefeb986803726fe 475 Gene3D G3DSA:3.40.50.300 144 318 3.4E-60 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS05370 2edfbb5f23f3ed2abefeb986803726fe 475 SMART SM00382 166 309 1.0E-10 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS05370 2edfbb5f23f3ed2abefeb986803726fe 475 SUPERFAMILY SSF52172 9 190 2.85E-38 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS05370 2edfbb5f23f3ed2abefeb986803726fe 475 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 05-07-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AC028_RS05370 2edfbb5f23f3ed2abefeb986803726fe 475 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 05-07-2017 IPR025944 Sigma-54 interaction domain, conserved site AC028_RS05370 2edfbb5f23f3ed2abefeb986803726fe 475 Pfam PF00158 Sigma-54 interaction domain 146 312 2.5E-68 T 05-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AC028_RS05370 2edfbb5f23f3ed2abefeb986803726fe 475 SUPERFAMILY SSF52540 146 389 5.92E-73 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS05370 2edfbb5f23f3ed2abefeb986803726fe 475 Pfam PF00072 Response regulator receiver domain 10 117 7.2E-26 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS14830 1473ddbded269b68cf2e4013692a9e1d 140 SUPERFAMILY SSF51344 3 85 7.32E-23 T 05-07-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AC028_RS14830 1473ddbded269b68cf2e4013692a9e1d 140 SUPERFAMILY SSF46604 87 135 3.14E-10 T 05-07-2017 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 AC028_RS14830 1473ddbded269b68cf2e4013692a9e1d 140 Gene3D G3DSA:1.20.5.440 91 133 2.9E-7 T 05-07-2017 AC028_RS14830 1473ddbded269b68cf2e4013692a9e1d 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 85 3.0E-37 T 05-07-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AC028_RS14830 1473ddbded269b68cf2e4013692a9e1d 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 83 1.4E-27 T 05-07-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AC028_RS14830 1473ddbded269b68cf2e4013692a9e1d 140 Gene3D G3DSA:2.60.15.10 3 90 2.5E-29 T 05-07-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AC028_RS14830 1473ddbded269b68cf2e4013692a9e1d 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 19.612 T 05-07-2017 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AC028_RS14830 1473ddbded269b68cf2e4013692a9e1d 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 132 2.0E-42 T 05-07-2017 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AC028_RS14830 1473ddbded269b68cf2e4013692a9e1d 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 131 2.5E-7 T 05-07-2017 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 AC028_RS11540 b05ee88838a7f24e0d8a579fefa049c3 194 Gene3D G3DSA:3.40.50.1470 5 190 4.7E-65 T 05-07-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AC028_RS11540 b05ee88838a7f24e0d8a579fefa049c3 194 SUPERFAMILY SSF53178 5 189 1.44E-64 T 05-07-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AC028_RS11540 b05ee88838a7f24e0d8a579fefa049c3 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 05-07-2017 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AC028_RS11540 b05ee88838a7f24e0d8a579fefa049c3 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 182 33.709 T 05-07-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AC028_RS11540 b05ee88838a7f24e0d8a579fefa049c3 194 Pfam PF01195 Peptidyl-tRNA hydrolase 6 187 8.8E-51 T 05-07-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AC028_RS11540 b05ee88838a7f24e0d8a579fefa049c3 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 189 4.2E-57 T 05-07-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AC028_RS06450 901dcd291fe6feef59eb9a90fdc0c07e 348 Gene3D G3DSA:3.40.50.2300 63 182 4.3E-41 T 05-07-2017 AC028_RS06450 901dcd291fe6feef59eb9a90fdc0c07e 348 SUPERFAMILY SSF47413 11 68 3.19E-17 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS06450 901dcd291fe6feef59eb9a90fdc0c07e 348 SUPERFAMILY SSF53822 70 341 4.71E-70 T 05-07-2017 IPR028082 Periplasmic binding protein-like I AC028_RS06450 901dcd291fe6feef59eb9a90fdc0c07e 348 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 22 32 4.9E-5 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS06450 901dcd291fe6feef59eb9a90fdc0c07e 348 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 12 22 4.9E-5 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS06450 901dcd291fe6feef59eb9a90fdc0c07e 348 Gene3D G3DSA:1.10.260.40 11 62 1.6E-24 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS06450 901dcd291fe6feef59eb9a90fdc0c07e 348 SMART SM00354 10 80 4.1E-29 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS06450 901dcd291fe6feef59eb9a90fdc0c07e 348 Gene3D G3DSA:3.40.50.2300 183 310 1.2E-47 T 05-07-2017 AC028_RS06450 901dcd291fe6feef59eb9a90fdc0c07e 348 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 56 4.4E-18 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS06450 901dcd291fe6feef59eb9a90fdc0c07e 348 Pfam PF13377 Periplasmic binding protein-like domain 177 340 2.1E-32 T 05-07-2017 AC028_RS20740 e362a05bb55ad6da491d6194ebdaec2d 284 Gene3D G3DSA:1.20.5.170 223 283 5.7E-6 T 05-07-2017 AC028_RS20740 e362a05bb55ad6da491d6194ebdaec2d 284 SUPERFAMILY SSF109709 156 217 3.4E-5 T 05-07-2017 AC028_RS01270 a85bed7afbf6dc778cb01c92a9957e76 372 SUPERFAMILY SSF102114 6 313 6.28E-69 T 05-07-2017 AC028_RS01270 a85bed7afbf6dc778cb01c92a9957e76 372 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 241 325 7.5E-10 T 05-07-2017 IPR023885 4Fe4S-binding SPASM domain AC028_RS01270 a85bed7afbf6dc778cb01c92a9957e76 372 Pfam PF04055 Radical SAM superfamily 13 158 4.2E-18 T 05-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AC028_RS01270 a85bed7afbf6dc778cb01c92a9957e76 372 Pfam PF13186 Iron-sulfur cluster-binding domain 238 304 2.5E-12 T 05-07-2017 IPR023885 4Fe4S-binding SPASM domain AC028_RS01270 a85bed7afbf6dc778cb01c92a9957e76 372 PIRSF PIRSF037420 1 352 1.6E-120 T 05-07-2017 IPR017200 Coenzyme PQQ synthesis protein E AC028_RS01270 a85bed7afbf6dc778cb01c92a9957e76 372 Gene3D G3DSA:3.20.20.70 5 322 4.4E-67 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS01270 a85bed7afbf6dc778cb01c92a9957e76 372 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 370 174.054 T 05-07-2017 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 AC028_RS01270 a85bed7afbf6dc778cb01c92a9957e76 372 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 5 358 1.7E-160 T 05-07-2017 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 AC028_RS01270 a85bed7afbf6dc778cb01c92a9957e76 372 Pfam PF13353 4Fe-4S single cluster domain 14 91 3.6E-5 T 05-07-2017 AC028_RS06030 9b6e47d1e2a88ee9ed50dd0f6594e0db 227 SUPERFAMILY SSF46894 124 226 2.43E-26 T 05-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AC028_RS06030 9b6e47d1e2a88ee9ed50dd0f6594e0db 227 Pfam PF00072 Response regulator receiver domain 10 118 2.4E-26 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS06030 9b6e47d1e2a88ee9ed50dd0f6594e0db 227 SUPERFAMILY SSF52172 9 128 3.56E-39 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS06030 9b6e47d1e2a88ee9ed50dd0f6594e0db 227 SMART SM00862 150 225 2.6E-23 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS06030 9b6e47d1e2a88ee9ed50dd0f6594e0db 227 SMART SM00448 8 118 1.7E-38 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS06030 9b6e47d1e2a88ee9ed50dd0f6594e0db 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 2.4E-21 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS06030 9b6e47d1e2a88ee9ed50dd0f6594e0db 227 Gene3D G3DSA:3.40.50.2300 9 150 3.0E-39 T 05-07-2017 AC028_RS06030 9b6e47d1e2a88ee9ed50dd0f6594e0db 227 Gene3D G3DSA:1.10.10.10 151 226 1.8E-28 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS03940 25543c5ad1ea4f49a0ea71d13267155d 299 Hamap MF_00367 GTPase Era [era]. 8 298 34.491 T 05-07-2017 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 AC028_RS03940 25543c5ad1ea4f49a0ea71d13267155d 299 SUPERFAMILY SSF52540 13 207 4.85E-43 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS03940 25543c5ad1ea4f49a0ea71d13267155d 299 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 13 33 1.3E-6 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS03940 25543c5ad1ea4f49a0ea71d13267155d 299 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 62 77 1.3E-6 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS03940 25543c5ad1ea4f49a0ea71d13267155d 299 Gene3D G3DSA:3.30.300.20 195 294 7.3E-36 T 05-07-2017 IPR015946 K homology domain-like, alpha/beta AC028_RS03940 25543c5ad1ea4f49a0ea71d13267155d 299 SUPERFAMILY SSF54814 184 299 2.75E-38 T 05-07-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 AC028_RS03940 25543c5ad1ea4f49a0ea71d13267155d 299 Pfam PF01926 50S ribosome-binding GTPase 13 127 2.6E-23 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS03940 25543c5ad1ea4f49a0ea71d13267155d 299 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 169 7.6E-28 T 05-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AC028_RS03940 25543c5ad1ea4f49a0ea71d13267155d 299 Gene3D G3DSA:3.40.50.300 9 194 2.5E-42 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS03940 25543c5ad1ea4f49a0ea71d13267155d 299 TIGRFAM TIGR00436 era: GTP-binding protein Era 12 281 1.2E-76 T 05-07-2017 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 AC028_RS03940 25543c5ad1ea4f49a0ea71d13267155d 299 Pfam PF07650 KH domain 211 286 9.1E-20 T 05-07-2017 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS01205 09cacb2b68ffb40debc0bd1da8e63877 241 Pfam PF00814 Glycoprotease family 28 222 4.0E-32 T 05-07-2017 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AC028_RS01205 09cacb2b68ffb40debc0bd1da8e63877 241 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 218 7.3E-56 T 05-07-2017 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 AC028_RS01205 09cacb2b68ffb40debc0bd1da8e63877 241 SUPERFAMILY SSF53067 1 101 5.61E-28 T 05-07-2017 AC028_RS01205 09cacb2b68ffb40debc0bd1da8e63877 241 Gene3D G3DSA:3.30.420.40 1 132 1.7E-40 T 05-07-2017 AC028_RS01205 09cacb2b68ffb40debc0bd1da8e63877 241 SUPERFAMILY SSF53067 106 216 2.33E-20 T 05-07-2017 AC028_RS14010 ad40754759d2533cd8e67108b2e1c5c7 170 SUPERFAMILY SSF56420 2 167 1.57E-63 T 05-07-2017 IPR023635 Peptide deformylase AC028_RS14010 ad40754759d2533cd8e67108b2e1c5c7 170 Gene3D G3DSA:3.90.45.10 4 167 4.1E-67 T 05-07-2017 IPR023635 Peptide deformylase AC028_RS14010 ad40754759d2533cd8e67108b2e1c5c7 170 PIRSF PIRSF004749 1 170 7.1E-58 T 05-07-2017 IPR023635 Peptide deformylase AC028_RS14010 ad40754759d2533cd8e67108b2e1c5c7 170 Hamap MF_00163 Peptide deformylase [def]. 2 165 31.486 T 05-07-2017 IPR023635 Peptide deformylase AC028_RS14010 ad40754759d2533cd8e67108b2e1c5c7 170 PRINTS PR01576 Peptide deformylase signature 123 152 8.0E-39 T 05-07-2017 IPR023635 Peptide deformylase AC028_RS14010 ad40754759d2533cd8e67108b2e1c5c7 170 PRINTS PR01576 Peptide deformylase signature 104 122 8.0E-39 T 05-07-2017 IPR023635 Peptide deformylase AC028_RS14010 ad40754759d2533cd8e67108b2e1c5c7 170 PRINTS PR01576 Peptide deformylase signature 36 65 8.0E-39 T 05-07-2017 IPR023635 Peptide deformylase AC028_RS14010 ad40754759d2533cd8e67108b2e1c5c7 170 PRINTS PR01576 Peptide deformylase signature 92 103 8.0E-39 T 05-07-2017 IPR023635 Peptide deformylase AC028_RS14010 ad40754759d2533cd8e67108b2e1c5c7 170 Pfam PF01327 Polypeptide deformylase 5 155 1.0E-52 T 05-07-2017 IPR023635 Peptide deformylase AC028_RS14010 ad40754759d2533cd8e67108b2e1c5c7 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 162 1.3E-53 T 05-07-2017 IPR023635 Peptide deformylase AC028_RS05665 3e782c776639f1c16d60de89b38d9559 318 Gene3D G3DSA:1.10.10.10 13 91 1.9E-24 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS05665 3e782c776639f1c16d60de89b38d9559 318 Pfam PF03466 LysR substrate binding domain 100 301 3.9E-50 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS05665 3e782c776639f1c16d60de89b38d9559 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 2.2E-20 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS05665 3e782c776639f1c16d60de89b38d9559 318 Gene3D G3DSA:3.40.190.10 101 188 4.6E-22 T 05-07-2017 AC028_RS05665 3e782c776639f1c16d60de89b38d9559 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 2.0E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS05665 3e782c776639f1c16d60de89b38d9559 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 2.0E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS05665 3e782c776639f1c16d60de89b38d9559 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 2.0E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS05665 3e782c776639f1c16d60de89b38d9559 318 SUPERFAMILY SSF53850 102 302 1.83E-47 T 05-07-2017 AC028_RS05665 3e782c776639f1c16d60de89b38d9559 318 Gene3D G3DSA:3.40.190.10 189 273 4.5E-26 T 05-07-2017 AC028_RS05665 3e782c776639f1c16d60de89b38d9559 318 SUPERFAMILY SSF46785 13 92 7.71E-21 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS06500 6df7025b9696b3e12c02576823b394bf 658 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 263 9.4E-69 T 05-07-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AC028_RS06500 6df7025b9696b3e12c02576823b394bf 658 Gene3D G3DSA:3.40.50.300 3 105 9.9E-61 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06500 6df7025b9696b3e12c02576823b394bf 658 Gene3D G3DSA:3.40.50.300 180 277 9.9E-61 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06500 6df7025b9696b3e12c02576823b394bf 658 Gene3D G3DSA:1.10.10.160 109 179 7.9E-16 T 05-07-2017 IPR013986 DExx box DNA helicase domain AC028_RS06500 6df7025b9696b3e12c02576823b394bf 658 Pfam PF13361 UvrD-like helicase C-terminal domain 269 421 2.2E-30 T 05-07-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AC028_RS06500 6df7025b9696b3e12c02576823b394bf 658 Pfam PF13361 UvrD-like helicase C-terminal domain 485 603 5.4E-28 T 05-07-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AC028_RS06500 6df7025b9696b3e12c02576823b394bf 658 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 2 658 36.609 T 05-07-2017 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AC028_RS06500 6df7025b9696b3e12c02576823b394bf 658 Gene3D G3DSA:1.10.486.10 382 526 2.9E-35 T 05-07-2017 AC028_RS06500 6df7025b9696b3e12c02576823b394bf 658 SUPERFAMILY SSF52540 2 628 1.66E-159 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06500 6df7025b9696b3e12c02576823b394bf 658 Gene3D G3DSA:3.40.50.300 278 381 1.7E-64 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06500 6df7025b9696b3e12c02576823b394bf 658 Gene3D G3DSA:3.40.50.300 540 628 1.7E-64 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11505 57ec74f26c1be946427acf23c4758108 432 Gene3D G3DSA:3.40.50.720 155 302 3.5E-33 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS11505 57ec74f26c1be946427acf23c4758108 432 PIRSF PIRSF000445 1 417 5.8E-146 T 05-07-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AC028_RS11505 57ec74f26c1be946427acf23c4758108 432 SUPERFAMILY SSF51735 154 306 2.9E-31 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS11505 57ec74f26c1be946427acf23c4758108 432 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 164 297 8.0E-47 T 05-07-2017 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AC028_RS11505 57ec74f26c1be946427acf23c4758108 432 SUPERFAMILY SSF69075 309 409 1.12E-22 T 05-07-2017 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AC028_RS11505 57ec74f26c1be946427acf23c4758108 432 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 312 407 2.8E-18 T 05-07-2017 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AC028_RS11505 57ec74f26c1be946427acf23c4758108 432 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 410 29.248 T 05-07-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AC028_RS11505 57ec74f26c1be946427acf23c4758108 432 SUPERFAMILY SSF69742 1 149 3.01E-46 T 05-07-2017 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AC028_RS11505 57ec74f26c1be946427acf23c4758108 432 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 148 7.5E-47 T 05-07-2017 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AC028_RS11505 57ec74f26c1be946427acf23c4758108 432 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 91 114 - T 05-07-2017 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AC028_RS11505 57ec74f26c1be946427acf23c4758108 432 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 403 3.2E-123 T 05-07-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AC028_RS10345 531c2a61612367f8a2cd9e4335045fb7 246 Pfam PF00034 Cytochrome c 145 225 2.9E-10 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS10345 531c2a61612367f8a2cd9e4335045fb7 246 Pfam PF00034 Cytochrome c 37 113 2.3E-7 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS10345 531c2a61612367f8a2cd9e4335045fb7 246 PIRSF PIRSF000005 3 228 4.1E-63 T 05-07-2017 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 AC028_RS10345 531c2a61612367f8a2cd9e4335045fb7 246 SUPERFAMILY SSF46626 130 228 1.13E-19 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS10345 531c2a61612367f8a2cd9e4335045fb7 246 Gene3D G3DSA:1.10.760.10 140 226 2.0E-26 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS10345 531c2a61612367f8a2cd9e4335045fb7 246 SUPERFAMILY SSF46626 42 114 5.09E-18 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS10345 531c2a61612367f8a2cd9e4335045fb7 246 Gene3D G3DSA:1.10.760.10 32 113 5.7E-24 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS11060 49ce80ea28ca30934454f1940fb1625e 294 SUPERFAMILY SSF161098 87 286 3.53E-31 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS11060 49ce80ea28ca30934454f1940fb1625e 294 Gene3D G3DSA:1.10.3720.10 86 290 7.0E-31 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS11060 49ce80ea28ca30934454f1940fb1625e 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 290 1.8E-29 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS07150 f39d280e0b5cc73b24bed9fbf5b9400b 377 SUPERFAMILY SSF51445 34 337 1.53E-80 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS07150 f39d280e0b5cc73b24bed9fbf5b9400b 377 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 159 168 - T 05-07-2017 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 AC028_RS07150 f39d280e0b5cc73b24bed9fbf5b9400b 377 Gene3D G3DSA:3.20.20.80 33 342 6.5E-95 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS07150 f39d280e0b5cc73b24bed9fbf5b9400b 377 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 57 314 1.1E-52 T 05-07-2017 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 AC028_RS17565 eec7c0945a204d3a147c9cccdf016f14 481 PRINTS PR00171 Sugar transporter signature 36 46 1.6E-24 T 05-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AC028_RS17565 eec7c0945a204d3a147c9cccdf016f14 481 PRINTS PR00171 Sugar transporter signature 384 405 1.6E-24 T 05-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AC028_RS17565 eec7c0945a204d3a147c9cccdf016f14 481 PRINTS PR00171 Sugar transporter signature 287 297 1.6E-24 T 05-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AC028_RS17565 eec7c0945a204d3a147c9cccdf016f14 481 PRINTS PR00171 Sugar transporter signature 119 138 1.6E-24 T 05-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AC028_RS17565 eec7c0945a204d3a147c9cccdf016f14 481 PRINTS PR00171 Sugar transporter signature 407 419 1.6E-24 T 05-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AC028_RS17565 eec7c0945a204d3a147c9cccdf016f14 481 Gene3D G3DSA:1.20.1250.20 274 478 9.4E-21 T 05-07-2017 AC028_RS17565 eec7c0945a204d3a147c9cccdf016f14 481 Gene3D G3DSA:1.20.1250.20 32 218 1.8E-26 T 05-07-2017 AC028_RS17565 eec7c0945a204d3a147c9cccdf016f14 481 Pfam PF00083 Sugar (and other) transporter 30 480 1.3E-109 T 05-07-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AC028_RS17565 eec7c0945a204d3a147c9cccdf016f14 481 ProSitePatterns PS00216 Sugar transport proteins signature 1. 82 99 - T 05-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AC028_RS17565 eec7c0945a204d3a147c9cccdf016f14 481 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 18 479 2.4E-111 T 05-07-2017 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 AC028_RS17565 eec7c0945a204d3a147c9cccdf016f14 481 ProSitePatterns PS00217 Sugar transport proteins signature 2. 124 149 - T 05-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AC028_RS17565 eec7c0945a204d3a147c9cccdf016f14 481 SUPERFAMILY SSF103473 15 480 2.22E-70 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS17565 eec7c0945a204d3a147c9cccdf016f14 481 ProSitePatterns PS00216 Sugar transport proteins signature 1. 331 348 - T 05-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AC028_RS02720 b3b4433b983a9c920c823029ee8f1faf 527 Gene3D G3DSA:3.40.50.720 54 77 6.4E-10 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS02720 b3b4433b983a9c920c823029ee8f1faf 527 SUPERFAMILY SSF54373 357 467 2.22E-30 T 05-07-2017 AC028_RS02720 b3b4433b983a9c920c823029ee8f1faf 527 Gene3D G3DSA:3.40.50.1770 2 53 7.8E-4 T 05-07-2017 AC028_RS02720 b3b4433b983a9c920c823029ee8f1faf 527 Gene3D G3DSA:3.90.660.10 361 458 8.1E-59 T 05-07-2017 AC028_RS02720 b3b4433b983a9c920c823029ee8f1faf 527 Gene3D G3DSA:3.90.660.10 78 165 8.1E-59 T 05-07-2017 AC028_RS02720 b3b4433b983a9c920c823029ee8f1faf 527 Pfam PF01593 Flavin containing amine oxidoreductase 56 516 1.2E-63 T 05-07-2017 IPR002937 Amine oxidase GO:0016491|GO:0055114 AC028_RS02720 b3b4433b983a9c920c823029ee8f1faf 527 Gene3D G3DSA:3.50.50.60 261 357 3.6E-20 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS02720 b3b4433b983a9c920c823029ee8f1faf 527 Gene3D G3DSA:3.50.50.60 484 519 3.6E-20 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS02720 b3b4433b983a9c920c823029ee8f1faf 527 SUPERFAMILY SSF51905 44 377 5.61E-54 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS02720 b3b4433b983a9c920c823029ee8f1faf 527 SUPERFAMILY SSF51905 477 518 5.61E-54 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS11495 8e3248ec317823a33650142e7bf76b4e 568 SUPERFAMILY SSF53756 211 556 4.34E-10 T 05-07-2017 AC028_RS11495 8e3248ec317823a33650142e7bf76b4e 568 SUPERFAMILY SSF48452 12 136 2.46E-18 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS11495 8e3248ec317823a33650142e7bf76b4e 568 Pfam PF14559 Tetratricopeptide repeat 68 127 1.0E-7 T 05-07-2017 AC028_RS11495 8e3248ec317823a33650142e7bf76b4e 568 SMART SM00028 57 90 5.3 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS11495 8e3248ec317823a33650142e7bf76b4e 568 SMART SM00028 23 56 69.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS11495 8e3248ec317823a33650142e7bf76b4e 568 SMART SM00028 91 124 24.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS11495 8e3248ec317823a33650142e7bf76b4e 568 Pfam PF13844 Glycosyl transferase family 41 206 357 1.8E-31 T 05-07-2017 IPR029489 O-GlcNAc transferase, C-terminal Reactome: R-HSA-3214847 AC028_RS11495 8e3248ec317823a33650142e7bf76b4e 568 Pfam PF13844 Glycosyl transferase family 41 366 555 5.2E-44 T 05-07-2017 IPR029489 O-GlcNAc transferase, C-terminal Reactome: R-HSA-3214847 AC028_RS11495 8e3248ec317823a33650142e7bf76b4e 568 Gene3D G3DSA:1.25.40.10 12 147 8.5E-22 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS18445 9e51fa83dc9223a831005c0213758329 574 PIRSF PIRSF004862 6 574 1.9E-135 T 05-07-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AC028_RS18445 9e51fa83dc9223a831005c0213758329 574 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 12 573 3.4E-82 T 05-07-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AC028_RS18445 9e51fa83dc9223a831005c0213758329 574 Pfam PF01514 Secretory protein of YscJ/FliF family 39 230 4.6E-66 T 05-07-2017 IPR006182 Secretory protein YscJ/FliF AC028_RS18445 9e51fa83dc9223a831005c0213758329 574 Pfam PF08345 Flagellar M-ring protein C-terminal 263 439 1.2E-45 T 05-07-2017 IPR013556 Flagellar M-ring C-terminal AC028_RS18445 9e51fa83dc9223a831005c0213758329 574 PRINTS PR01009 Flagellar M-ring protein signature 363 387 1.3E-32 T 05-07-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AC028_RS18445 9e51fa83dc9223a831005c0213758329 574 PRINTS PR01009 Flagellar M-ring protein signature 206 224 1.3E-32 T 05-07-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AC028_RS18445 9e51fa83dc9223a831005c0213758329 574 PRINTS PR01009 Flagellar M-ring protein signature 163 177 1.3E-32 T 05-07-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AC028_RS18445 9e51fa83dc9223a831005c0213758329 574 PRINTS PR01009 Flagellar M-ring protein signature 276 294 1.3E-32 T 05-07-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AC028_RS18445 9e51fa83dc9223a831005c0213758329 574 PRINTS PR01009 Flagellar M-ring protein signature 131 149 1.3E-32 T 05-07-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AC028_RS16930 a1ced404fb0b151815be5f8e425f390a 321 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 3 321 59.077 T 05-07-2017 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 AC028_RS16930 a1ced404fb0b151815be5f8e425f390a 321 Gene3D G3DSA:3.90.420.10 67 318 2.0E-73 T 05-07-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AC028_RS16930 a1ced404fb0b151815be5f8e425f390a 321 Pfam PF00174 Oxidoreductase molybdopterin binding domain 98 253 7.8E-31 T 05-07-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AC028_RS16930 a1ced404fb0b151815be5f8e425f390a 321 SUPERFAMILY SSF56524 66 317 1.31E-90 T 05-07-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AC028_RS14045 faa6acb528703054dc5f403a4629617d 501 Pfam PF03703 Bacterial PH domain 262 335 3.4E-8 T 05-07-2017 IPR005182 Domain of unknown function DUF304 AC028_RS14045 faa6acb528703054dc5f403a4629617d 501 Pfam PF03703 Bacterial PH domain 410 488 1.1E-12 T 05-07-2017 IPR005182 Domain of unknown function DUF304 AC028_RS14045 faa6acb528703054dc5f403a4629617d 501 Pfam PF03703 Bacterial PH domain 70 149 2.6E-19 T 05-07-2017 IPR005182 Domain of unknown function DUF304 AC028_RS14045 faa6acb528703054dc5f403a4629617d 501 PIRSF PIRSF026631 7 501 6.5E-132 T 05-07-2017 IPR014529 Uncharacterised conserved protein UCP026631 AC028_RS11645 5cd53facd3158786c0bd92327dd92306 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 201 29.337 T 05-07-2017 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11645 5cd53facd3158786c0bd92327dd92306 201 Pfam PF00573 Ribosomal protein L4/L1 family 12 198 7.2E-55 T 05-07-2017 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AC028_RS11645 5cd53facd3158786c0bd92327dd92306 201 Gene3D G3DSA:3.40.1370.10 53 201 3.9E-47 T 05-07-2017 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AC028_RS11645 5cd53facd3158786c0bd92327dd92306 201 SUPERFAMILY SSF52166 10 200 1.57E-61 T 05-07-2017 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AC028_RS11645 5cd53facd3158786c0bd92327dd92306 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 198 2.8E-64 T 05-07-2017 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS22200 b6928ac3b2ba7d3edb3ab8e1e5796005 439 PIRSF PIRSF004548 1 439 6.5E-158 T 05-07-2017 IPR010364 Uncharacterised protein family, inner membrane CreD AC028_RS22200 b6928ac3b2ba7d3edb3ab8e1e5796005 439 Pfam PF06123 Inner membrane protein CreD 6 432 7.8E-144 T 05-07-2017 IPR010364 Uncharacterised protein family, inner membrane CreD AC028_RS03535 c8af6a38b4b746258f883b7a3fbda94b 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS03535 c8af6a38b4b746258f883b7a3fbda94b 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS03535 c8af6a38b4b746258f883b7a3fbda94b 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS03535 c8af6a38b4b746258f883b7a3fbda94b 313 Pfam PF03466 LysR substrate binding domain 87 290 1.2E-33 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS03535 c8af6a38b4b746258f883b7a3fbda94b 313 Gene3D G3DSA:1.10.10.10 1 85 1.7E-29 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS03535 c8af6a38b4b746258f883b7a3fbda94b 313 SUPERFAMILY SSF53850 91 290 4.81E-30 T 05-07-2017 AC028_RS03535 c8af6a38b4b746258f883b7a3fbda94b 313 Gene3D G3DSA:3.40.190.10 175 263 5.3E-17 T 05-07-2017 AC028_RS03535 c8af6a38b4b746258f883b7a3fbda94b 313 Gene3D G3DSA:3.40.190.10 90 174 3.3E-18 T 05-07-2017 AC028_RS03535 c8af6a38b4b746258f883b7a3fbda94b 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.3E-22 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS03535 c8af6a38b4b746258f883b7a3fbda94b 313 SUPERFAMILY SSF46785 1 86 2.3E-24 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS11140 6cb5258d575d766575356b4de49a5d35 277 Pfam PF13557 Putative MetA-pathway of phenol degradation 17 271 1.1E-43 T 05-07-2017 IPR025737 MetA-pathway of phenol degradation, putative AC028_RS01825 7dc45d64da3623934722bffb8bc57498 325 SUPERFAMILY SSF51445 26 307 2.48E-27 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS01825 7dc45d64da3623934722bffb8bc57498 325 Gene3D G3DSA:3.20.20.80 50 311 2.4E-15 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS10315 5a4c5b35138b6bc27ccd57a08f43e644 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 56.554 T 05-07-2017 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AC028_RS10315 5a4c5b35138b6bc27ccd57a08f43e644 490 Gene3D G3DSA:3.40.605.10 9 265 2.5E-105 T 05-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AC028_RS10315 5a4c5b35138b6bc27ccd57a08f43e644 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 8.4E-216 T 05-07-2017 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AC028_RS10315 5a4c5b35138b6bc27ccd57a08f43e644 490 Pfam PF00171 Aldehyde dehydrogenase family 18 479 5.9E-179 T 05-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AC028_RS10315 5a4c5b35138b6bc27ccd57a08f43e644 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 05-07-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AC028_RS10315 5a4c5b35138b6bc27ccd57a08f43e644 490 SUPERFAMILY SSF53720 9 482 1.09E-173 T 05-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AC028_RS10315 5a4c5b35138b6bc27ccd57a08f43e644 490 Gene3D G3DSA:3.40.309.10 266 444 9.6E-70 T 05-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AC028_RS10315 5a4c5b35138b6bc27ccd57a08f43e644 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 05-07-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AC028_RS22485 79ce1b0a696e578aeafa71cbdda7efd6 209 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 142 7.5E-31 T 05-07-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AC028_RS22485 79ce1b0a696e578aeafa71cbdda7efd6 209 PIRSF PIRSF009320 1 209 1.5E-65 T 05-07-2017 AC028_RS22485 79ce1b0a696e578aeafa71cbdda7efd6 209 SUPERFAMILY SSF52540 2 207 1.66E-44 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS22485 79ce1b0a696e578aeafa71cbdda7efd6 209 Gene3D G3DSA:3.40.50.300 3 206 1.3E-43 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19820 c247de1d0831145d8cea47951d87b169 340 SUPERFAMILY SSF47413 5 63 2.63E-16 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS19820 c247de1d0831145d8cea47951d87b169 340 SMART SM00354 5 75 8.9E-25 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS19820 c247de1d0831145d8cea47951d87b169 340 Gene3D G3DSA:3.40.50.2300 59 175 3.9E-37 T 05-07-2017 AC028_RS19820 c247de1d0831145d8cea47951d87b169 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 2.4E-5 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS19820 c247de1d0831145d8cea47951d87b169 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 2.4E-5 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS19820 c247de1d0831145d8cea47951d87b169 340 Gene3D G3DSA:1.10.260.40 6 58 5.0E-23 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS19820 c247de1d0831145d8cea47951d87b169 340 SUPERFAMILY SSF53822 64 335 3.87E-69 T 05-07-2017 IPR028082 Periplasmic binding protein-like I AC028_RS19820 c247de1d0831145d8cea47951d87b169 340 Gene3D G3DSA:3.40.50.2300 176 313 3.1E-48 T 05-07-2017 AC028_RS19820 c247de1d0831145d8cea47951d87b169 340 Pfam PF13377 Periplasmic binding protein-like domain 172 333 7.6E-38 T 05-07-2017 AC028_RS19820 c247de1d0831145d8cea47951d87b169 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 51 3.3E-15 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS19820 c247de1d0831145d8cea47951d87b169 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 05-07-2017 AC028_RS02390 f828d87e6ee617b1cf49b765a3538d71 120 SMART SM01126 1 99 1.1E-9 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS02390 f828d87e6ee617b1cf49b765a3538d71 120 Pfam PF12762 ISXO2-like transposase domain 1 99 7.2E-24 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS17790 81d3e64e6b83aa10781757947f1cf9ae 107 Pfam PF01371 Trp repressor protein 15 99 5.9E-28 T 05-07-2017 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 AC028_RS17790 81d3e64e6b83aa10781757947f1cf9ae 107 Gene3D G3DSA:1.10.1270.10 14 105 1.3E-34 T 05-07-2017 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 AC028_RS17790 81d3e64e6b83aa10781757947f1cf9ae 107 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 16 97 5.8E-14 T 05-07-2017 IPR013368 TrpR homologue YerC/YecD AC028_RS17790 81d3e64e6b83aa10781757947f1cf9ae 107 SUPERFAMILY SSF48295 15 99 3.3E-23 T 05-07-2017 IPR010921 Trp repressor/replication initiator GO:0043565 AC028_RS17790 81d3e64e6b83aa10781757947f1cf9ae 107 PIRSF PIRSF012508 3 105 1.2E-27 T 05-07-2017 IPR013368 TrpR homologue YerC/YecD AC028_RS16910 475b7aeb86198f7579adcab96923634f 91 Pfam PF09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) 4 90 5.8E-29 T 05-07-2017 IPR013433 Putative polyhydroxyalkanoic acid system protein AC028_RS16910 475b7aeb86198f7579adcab96923634f 91 TIGRFAM TIGR02610 PHA_gran_rgn: putative polyhydroxyalkanoic acid system protein 1 91 6.8E-44 T 05-07-2017 IPR013433 Putative polyhydroxyalkanoic acid system protein AC028_RS16910 475b7aeb86198f7579adcab96923634f 91 Gene3D G3DSA:3.30.70.360 9 88 1.7E-4 T 05-07-2017 IPR011650 Peptidase M20, dimerisation domain AC028_RS03920 223981c195fa947b29ef3ae0a83ca5eb 165 Pfam PF01928 CYTH domain 4 144 2.9E-17 T 05-07-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 AC028_RS03920 223981c195fa947b29ef3ae0a83ca5eb 165 PIRSF PIRSF016487 1 165 2.4E-61 T 05-07-2017 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like AC028_RS03920 223981c195fa947b29ef3ae0a83ca5eb 165 Gene3D G3DSA:2.40.320.10 1 158 2.8E-53 T 05-07-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 AC028_RS03920 223981c195fa947b29ef3ae0a83ca5eb 165 SMART SM01118 2 155 8.5E-23 T 05-07-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 AC028_RS03920 223981c195fa947b29ef3ae0a83ca5eb 165 SUPERFAMILY SSF55154 1 155 5.89E-41 T 05-07-2017 IPR033469 CYTH-like domain Reactome: R-HSA-196819 AC028_RS12290 2598e20db227d5628fabc373ea76804f 314 Gene3D G3DSA:3.30.70.250 127 198 5.3E-27 T 05-07-2017 AC028_RS12290 2598e20db227d5628fabc373ea76804f 314 SUPERFAMILY SSF55048 132 199 3.14E-16 T 05-07-2017 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 AC028_RS12290 2598e20db227d5628fabc373ea76804f 314 PIRSF PIRSF000446 4 312 5.1E-102 T 05-07-2017 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AC028_RS12290 2598e20db227d5628fabc373ea76804f 314 SUPERFAMILY SSF52151 6 124 1.86E-75 T 05-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AC028_RS12290 2598e20db227d5628fabc373ea76804f 314 SUPERFAMILY SSF52151 192 312 1.86E-75 T 05-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AC028_RS12290 2598e20db227d5628fabc373ea76804f 314 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 6 293 1.2E-98 T 05-07-2017 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AC028_RS12290 2598e20db227d5628fabc373ea76804f 314 Pfam PF00698 Acyl transferase domain 8 264 1.2E-36 T 05-07-2017 IPR014043 Acyl transferase AC028_RS12290 2598e20db227d5628fabc373ea76804f 314 Gene3D G3DSA:3.40.366.10 4 124 1.3E-68 T 05-07-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AC028_RS12290 2598e20db227d5628fabc373ea76804f 314 Gene3D G3DSA:3.40.366.10 199 302 1.3E-68 T 05-07-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AC028_RS12290 2598e20db227d5628fabc373ea76804f 314 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 9 312 8.5E-39 T 05-07-2017 IPR020801 Polyketide synthase, acyl transferase domain AC028_RS02325 1daca5f40c0aaf386c38aeed5639af56 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 14 223 5.1E-66 T 05-07-2017 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 AC028_RS02325 1daca5f40c0aaf386c38aeed5639af56 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 223 9.0E-21 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS02325 1daca5f40c0aaf386c38aeed5639af56 230 SUPERFAMILY SSF161098 5 221 3.27E-49 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS02325 1daca5f40c0aaf386c38aeed5639af56 230 Gene3D G3DSA:1.10.3720.10 9 227 3.5E-44 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS03855 18210d7613281856c433a084c37b72eb 340 SUPERFAMILY SSF56281 19 329 9.4E-60 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS03855 18210d7613281856c433a084c37b72eb 340 Gene3D G3DSA:3.60.15.10 41 195 1.0E-15 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS03855 18210d7613281856c433a084c37b72eb 340 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 16 339 1.6E-145 T 05-07-2017 IPR026360 Putative exonuclease, DNA ligase-associated AC028_RS00220 a63f9ccbed521e12969966aa453917c6 315 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 59 66 - T 05-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AC028_RS00220 a63f9ccbed521e12969966aa453917c6 315 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 13 157 3.3E-35 T 05-07-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AC028_RS00220 a63f9ccbed521e12969966aa453917c6 315 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 12 315 39.085 T 05-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AC028_RS00220 a63f9ccbed521e12969966aa453917c6 315 Gene3D G3DSA:3.40.50.1370 154 293 4.1E-46 T 05-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AC028_RS00220 a63f9ccbed521e12969966aa453917c6 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 49 71 2.1E-31 T 05-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AC028_RS00220 a63f9ccbed521e12969966aa453917c6 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 87 96 2.1E-31 T 05-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AC028_RS00220 a63f9ccbed521e12969966aa453917c6 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 295 309 2.1E-31 T 05-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AC028_RS00220 a63f9ccbed521e12969966aa453917c6 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 144 161 2.1E-31 T 05-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AC028_RS00220 a63f9ccbed521e12969966aa453917c6 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 271 276 2.1E-31 T 05-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AC028_RS00220 a63f9ccbed521e12969966aa453917c6 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 230 239 2.1E-31 T 05-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AC028_RS00220 a63f9ccbed521e12969966aa453917c6 315 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 13 314 1.6E-83 T 05-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AC028_RS00220 a63f9ccbed521e12969966aa453917c6 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 59 78 4.4E-21 T 05-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AC028_RS00220 a63f9ccbed521e12969966aa453917c6 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 279 302 4.4E-21 T 05-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AC028_RS00220 a63f9ccbed521e12969966aa453917c6 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 145 156 4.4E-21 T 05-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AC028_RS00220 a63f9ccbed521e12969966aa453917c6 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 4.4E-21 T 05-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AC028_RS00220 a63f9ccbed521e12969966aa453917c6 315 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 166 312 2.7E-22 T 05-07-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AC028_RS00220 a63f9ccbed521e12969966aa453917c6 315 Gene3D G3DSA:3.40.50.1370 13 153 4.4E-43 T 05-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AC028_RS00220 a63f9ccbed521e12969966aa453917c6 315 SUPERFAMILY SSF53671 11 315 1.11E-87 T 05-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AC028_RS17040 2f17dda68b68c2a25caec41d90fb5e49 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.1E-52 T 05-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS17040 2f17dda68b68c2a25caec41d90fb5e49 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.1E-52 T 05-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS17040 2f17dda68b68c2a25caec41d90fb5e49 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 627 640 1.1E-52 T 05-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS17040 2f17dda68b68c2a25caec41d90fb5e49 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 1.1E-52 T 05-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS17040 2f17dda68b68c2a25caec41d90fb5e49 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 1.1E-52 T 05-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS17040 2f17dda68b68c2a25caec41d90fb5e49 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 1.1E-52 T 05-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS17040 2f17dda68b68c2a25caec41d90fb5e49 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 1.1E-52 T 05-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS17040 2f17dda68b68c2a25caec41d90fb5e49 662 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 634 1.6E-114 T 05-07-2017 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AC028_RS17040 2f17dda68b68c2a25caec41d90fb5e49 662 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 636 4.9E-217 T 05-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS17040 2f17dda68b68c2a25caec41d90fb5e49 662 Pfam PF01578 Cytochrome C assembly protein 89 295 8.8E-52 T 05-07-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AC028_RS17040 2f17dda68b68c2a25caec41d90fb5e49 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 7.0E-90 T 05-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS17040 2f17dda68b68c2a25caec41d90fb5e49 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 7.0E-90 T 05-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS17040 2f17dda68b68c2a25caec41d90fb5e49 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 7.0E-90 T 05-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS17040 2f17dda68b68c2a25caec41d90fb5e49 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 7.0E-90 T 05-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS17040 2f17dda68b68c2a25caec41d90fb5e49 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 7.0E-90 T 05-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS17040 2f17dda68b68c2a25caec41d90fb5e49 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 7.0E-90 T 05-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS17040 2f17dda68b68c2a25caec41d90fb5e49 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 7.0E-90 T 05-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS17040 2f17dda68b68c2a25caec41d90fb5e49 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 7.0E-90 T 05-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS14290 96f709273c9a7e74f19af4c331536583 223 Pfam PF00691 OmpA family 92 196 2.3E-19 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS14290 96f709273c9a7e74f19af4c331536583 223 SUPERFAMILY SSF103088 82 200 4.45E-29 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS14290 96f709273c9a7e74f19af4c331536583 223 Gene3D G3DSA:3.30.1330.60 81 200 1.2E-32 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS07890 539b267ae46bae65398fd36d5d0c271b 498 Pfam PF02321 Outer membrane efflux protein 65 261 1.7E-20 T 05-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AC028_RS07890 539b267ae46bae65398fd36d5d0c271b 498 Pfam PF02321 Outer membrane efflux protein 293 462 2.7E-21 T 05-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AC028_RS07890 539b267ae46bae65398fd36d5d0c271b 498 Gene3D G3DSA:1.20.1600.10 55 477 4.4E-95 T 05-07-2017 AC028_RS07890 539b267ae46bae65398fd36d5d0c271b 498 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 474 2.2E-93 T 05-07-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AC028_RS07890 539b267ae46bae65398fd36d5d0c271b 498 SUPERFAMILY SSF56954 3 476 2.62E-98 T 05-07-2017 AC028_RS20260 9d45648d08c943ef2274fc37c72edb8b 449 SUPERFAMILY SSF51338 14 72 4.94E-25 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS20260 9d45648d08c943ef2274fc37c72edb8b 449 SUPERFAMILY SSF51338 370 444 4.94E-25 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS20260 9d45648d08c943ef2274fc37c72edb8b 449 Gene3D G3DSA:2.30.40.10 380 417 5.6E-11 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS20260 9d45648d08c943ef2274fc37c72edb8b 449 Gene3D G3DSA:2.30.40.10 14 74 5.6E-11 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS20260 9d45648d08c943ef2274fc37c72edb8b 449 Pfam PF01979 Amidohydrolase family 70 417 8.2E-66 T 05-07-2017 IPR006680 Amidohydrolase-related GO:0016787 AC028_RS20260 9d45648d08c943ef2274fc37c72edb8b 449 Gene3D G3DSA:3.20.20.140 75 379 6.6E-100 T 05-07-2017 AC028_RS20260 9d45648d08c943ef2274fc37c72edb8b 449 SUPERFAMILY SSF51556 72 371 1.74E-95 T 05-07-2017 IPR032466 Metal-dependent hydrolase AC028_RS03865 928209bacbcbfd697be121c715eec496 534 Gene3D G3DSA:2.40.50.140 413 533 5.3E-31 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS03865 928209bacbcbfd697be121c715eec496 534 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 2 532 1.2E-187 T 05-07-2017 IPR026333 ATP-dependent DNA ligase, PP_1105 family AC028_RS03865 928209bacbcbfd697be121c715eec496 534 Gene3D G3DSA:3.30.470.30 237 352 7.4E-28 T 05-07-2017 AC028_RS03865 928209bacbcbfd697be121c715eec496 534 Pfam PF04675 DNA ligase N terminus 3 166 2.9E-21 T 05-07-2017 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 AC028_RS03865 928209bacbcbfd697be121c715eec496 534 Pfam PF04679 ATP dependent DNA ligase C terminal region 429 518 3.2E-8 T 05-07-2017 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 AC028_RS03865 928209bacbcbfd697be121c715eec496 534 SUPERFAMILY SSF50249 413 532 2.06E-26 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS03865 928209bacbcbfd697be121c715eec496 534 SUPERFAMILY SSF56091 206 408 2.27E-54 T 05-07-2017 AC028_RS03865 928209bacbcbfd697be121c715eec496 534 Pfam PF01068 ATP dependent DNA ligase domain 212 408 4.0E-34 T 05-07-2017 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 AC028_RS03865 928209bacbcbfd697be121c715eec496 534 Gene3D G3DSA:3.30.1490.70 206 236 1.5E-21 T 05-07-2017 AC028_RS03865 928209bacbcbfd697be121c715eec496 534 Gene3D G3DSA:3.30.1490.70 365 408 1.5E-21 T 05-07-2017 AC028_RS21845 e5a31638ddc7a9c0b0d1afc97a7e8bed 1020 SUPERFAMILY SSF56935 702 746 2.34E-76 T 05-07-2017 AC028_RS21845 e5a31638ddc7a9c0b0d1afc97a7e8bed 1020 SUPERFAMILY SSF56935 118 263 2.34E-76 T 05-07-2017 AC028_RS21845 e5a31638ddc7a9c0b0d1afc97a7e8bed 1020 SUPERFAMILY SSF56935 798 913 2.34E-76 T 05-07-2017 AC028_RS21845 e5a31638ddc7a9c0b0d1afc97a7e8bed 1020 SUPERFAMILY SSF56935 303 651 2.34E-76 T 05-07-2017 AC028_RS21845 e5a31638ddc7a9c0b0d1afc97a7e8bed 1020 SUPERFAMILY SSF56935 941 1020 2.34E-76 T 05-07-2017 AC028_RS21845 e5a31638ddc7a9c0b0d1afc97a7e8bed 1020 Gene3D G3DSA:2.60.40.10 33 86 2.9E-5 T 05-07-2017 IPR013783 Immunoglobulin-like fold AC028_RS21845 e5a31638ddc7a9c0b0d1afc97a7e8bed 1020 Gene3D G3DSA:2.170.130.10 118 255 5.8E-12 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS21845 e5a31638ddc7a9c0b0d1afc97a7e8bed 1020 Pfam PF07715 TonB-dependent Receptor Plug Domain 139 243 2.7E-9 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS21845 e5a31638ddc7a9c0b0d1afc97a7e8bed 1020 SUPERFAMILY SSF49452 29 108 4.32E-6 T 05-07-2017 IPR013784 Carbohydrate-binding-like fold GO:0030246 AC028_RS21845 e5a31638ddc7a9c0b0d1afc97a7e8bed 1020 Gene3D G3DSA:2.40.170.20 570 1020 4.3E-59 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21845 e5a31638ddc7a9c0b0d1afc97a7e8bed 1020 Gene3D G3DSA:2.40.170.20 300 528 4.3E-59 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21845 e5a31638ddc7a9c0b0d1afc97a7e8bed 1020 Pfam PF13620 Carboxypeptidase regulatory-like domain 45 108 3.5E-7 T 05-07-2017 AC028_RS11325 6b8343451cd6f164c891252abf9189a7 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 7.8E-6 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS11325 6b8343451cd6f164c891252abf9189a7 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 7.8E-6 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS11325 6b8343451cd6f164c891252abf9189a7 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 7.8E-6 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS11325 6b8343451cd6f164c891252abf9189a7 313 Gene3D G3DSA:3.40.50.1820 6 307 4.6E-73 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS11325 6b8343451cd6f164c891252abf9189a7 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 1.2E-13 T 05-07-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AC028_RS11325 6b8343451cd6f164c891252abf9189a7 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 1.2E-13 T 05-07-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AC028_RS11325 6b8343451cd6f164c891252abf9189a7 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 1.2E-13 T 05-07-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AC028_RS11325 6b8343451cd6f164c891252abf9189a7 313 Pfam PF00561 alpha/beta hydrolase fold 35 298 1.2E-31 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS11325 6b8343451cd6f164c891252abf9189a7 313 PIRSF PIRSF006431 1 313 5.3E-139 T 05-07-2017 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AC028_RS11325 6b8343451cd6f164c891252abf9189a7 313 SUPERFAMILY SSF53474 2 310 2.03E-67 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS11325 6b8343451cd6f164c891252abf9189a7 313 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 311 5.8E-152 T 05-07-2017 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AC028_RS02150 09ce35752de64e530bcdee592bb61f11 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS02150 09ce35752de64e530bcdee592bb61f11 320 Pfam PF12762 ISXO2-like transposase domain 137 285 4.5E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS02150 09ce35752de64e530bcdee592bb61f11 320 SMART SM01126 137 285 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS10255 9cd89837432d3e23b0affd1e4e1c345b 964 Pfam PF16355 Domain of unknown function (DUF4982) 642 700 9.5E-19 T 05-07-2017 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS10255 9cd89837432d3e23b0affd1e4e1c345b 964 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 100 223 6.0E-15 T 05-07-2017 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS10255 9cd89837432d3e23b0affd1e4e1c345b 964 SUPERFAMILY SSF49785 52 225 5.22E-39 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS10255 9cd89837432d3e23b0affd1e4e1c345b 964 Gene3D G3DSA:2.60.40.1560 629 718 6.1E-27 T 05-07-2017 AC028_RS10255 9cd89837432d3e23b0affd1e4e1c345b 964 Gene3D G3DSA:3.20.20.80 344 622 1.3E-63 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS10255 9cd89837432d3e23b0affd1e4e1c345b 964 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 439 453 - T 05-07-2017 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 AC028_RS10255 9cd89837432d3e23b0affd1e4e1c345b 964 Pfam PF00703 Glycosyl hydrolases family 2 247 339 6.9E-11 T 05-07-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AC028_RS10255 9cd89837432d3e23b0affd1e4e1c345b 964 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 346 511 5.8E-18 T 05-07-2017 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS10255 9cd89837432d3e23b0affd1e4e1c345b 964 SUPERFAMILY SSF51445 344 622 7.2E-64 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS10255 9cd89837432d3e23b0affd1e4e1c345b 964 Gene3D G3DSA:2.60.40.320 216 340 1.9E-20 T 05-07-2017 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 AC028_RS10255 9cd89837432d3e23b0affd1e4e1c345b 964 SUPERFAMILY SSF49303 247 339 7.19E-14 T 05-07-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AC028_RS10255 9cd89837432d3e23b0affd1e4e1c345b 964 Gene3D G3DSA:2.60.120.260 53 215 2.1E-36 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS18745 92e0107c02af542b65e2594a47391ee1 322 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 13 302 3.7E-47 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS18745 92e0107c02af542b65e2594a47391ee1 322 SUPERFAMILY SSF51905 5 318 6.74E-54 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS18745 92e0107c02af542b65e2594a47391ee1 322 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 13 318 6.3E-117 T 05-07-2017 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 AC028_RS18745 92e0107c02af542b65e2594a47391ee1 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 1.6E-37 T 05-07-2017 AC028_RS18745 92e0107c02af542b65e2594a47391ee1 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 1.6E-37 T 05-07-2017 AC028_RS18745 92e0107c02af542b65e2594a47391ee1 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 1.6E-37 T 05-07-2017 AC028_RS18745 92e0107c02af542b65e2594a47391ee1 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.6E-37 T 05-07-2017 AC028_RS18745 92e0107c02af542b65e2594a47391ee1 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 257 1.6E-37 T 05-07-2017 AC028_RS18745 92e0107c02af542b65e2594a47391ee1 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 13 35 9.2E-74 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS18745 92e0107c02af542b65e2594a47391ee1 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 134 146 9.2E-74 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS18745 92e0107c02af542b65e2594a47391ee1 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 112 120 9.2E-74 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS18745 92e0107c02af542b65e2594a47391ee1 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 149 173 9.2E-74 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS18745 92e0107c02af542b65e2594a47391ee1 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 204 220 9.2E-74 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS18745 92e0107c02af542b65e2594a47391ee1 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 281 299 9.2E-74 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS18745 92e0107c02af542b65e2594a47391ee1 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 243 264 9.2E-74 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS18745 92e0107c02af542b65e2594a47391ee1 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 46 61 9.2E-74 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS18745 92e0107c02af542b65e2594a47391ee1 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 67 77 9.2E-74 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS18745 92e0107c02af542b65e2594a47391ee1 322 Gene3D G3DSA:3.50.50.60 125 249 1.8E-33 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS18745 92e0107c02af542b65e2594a47391ee1 322 Gene3D G3DSA:3.50.50.60 10 124 1.6E-32 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS18745 92e0107c02af542b65e2594a47391ee1 322 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 141 161 - T 05-07-2017 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AC028_RS02940 58bec6bd571884daf5bcea388a122140 370 SUPERFAMILY SSF53756 1 368 8.97E-53 T 05-07-2017 AC028_RS02940 58bec6bd571884daf5bcea388a122140 370 Pfam PF13439 Glycosyltransferase Family 4 16 169 1.1E-24 T 05-07-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AC028_RS02940 58bec6bd571884daf5bcea388a122140 370 Gene3D G3DSA:3.40.50.2000 155 333 1.1E-13 T 05-07-2017 AC028_RS02940 58bec6bd571884daf5bcea388a122140 370 Pfam PF00534 Glycosyl transferases group 1 193 341 2.2E-13 T 05-07-2017 IPR001296 Glycosyl transferase, family 1 AC028_RS04535 07c5d447d0aca97f29bf602f9fe8d940 1004 Pfam PF00593 TonB dependent receptor 675 1002 1.2E-31 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS04535 07c5d447d0aca97f29bf602f9fe8d940 1004 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 176 2.5E-15 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS04535 07c5d447d0aca97f29bf602f9fe8d940 1004 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 50 1003 1.2E-201 T 05-07-2017 IPR010104 Bacterial TonB-dependent receptor AC028_RS04535 07c5d447d0aca97f29bf602f9fe8d940 1004 SUPERFAMILY SSF56935 309 522 2.15E-91 T 05-07-2017 AC028_RS04535 07c5d447d0aca97f29bf602f9fe8d940 1004 SUPERFAMILY SSF56935 44 255 2.15E-91 T 05-07-2017 AC028_RS04535 07c5d447d0aca97f29bf602f9fe8d940 1004 SUPERFAMILY SSF56935 579 768 2.15E-91 T 05-07-2017 AC028_RS04535 07c5d447d0aca97f29bf602f9fe8d940 1004 SUPERFAMILY SSF56935 841 1003 2.15E-91 T 05-07-2017 AC028_RS04535 07c5d447d0aca97f29bf602f9fe8d940 1004 Gene3D G3DSA:2.40.170.20 184 427 1.1E-61 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS04535 07c5d447d0aca97f29bf602f9fe8d940 1004 Gene3D G3DSA:2.40.170.20 826 1003 1.1E-61 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS04535 07c5d447d0aca97f29bf602f9fe8d940 1004 Gene3D G3DSA:2.40.170.20 462 565 1.1E-61 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS04535 07c5d447d0aca97f29bf602f9fe8d940 1004 Gene3D G3DSA:2.40.170.20 668 767 1.1E-61 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS04535 07c5d447d0aca97f29bf602f9fe8d940 1004 Gene3D G3DSA:2.40.170.20 599 633 1.1E-61 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS04535 07c5d447d0aca97f29bf602f9fe8d940 1004 Gene3D G3DSA:2.170.130.10 70 183 6.1E-19 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS12425 ea32aa6cef7db4b24887985e24685003 299 SUPERFAMILY SSF49493 137 212 7.98E-12 T 05-07-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AC028_RS12425 ea32aa6cef7db4b24887985e24685003 299 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 05-07-2017 IPR018253 DnaJ domain, conserved site AC028_RS12425 ea32aa6cef7db4b24887985e24685003 299 Gene3D G3DSA:2.60.260.20 134 188 2.4E-11 T 05-07-2017 AC028_RS12425 ea32aa6cef7db4b24887985e24685003 299 Gene3D G3DSA:1.10.287.110 2 91 5.3E-31 T 05-07-2017 IPR001623 DnaJ domain AC028_RS12425 ea32aa6cef7db4b24887985e24685003 299 PRINTS PR00625 DnaJ domain signature 25 40 1.2E-21 T 05-07-2017 IPR001623 DnaJ domain AC028_RS12425 ea32aa6cef7db4b24887985e24685003 299 PRINTS PR00625 DnaJ domain signature 41 61 1.2E-21 T 05-07-2017 IPR001623 DnaJ domain AC028_RS12425 ea32aa6cef7db4b24887985e24685003 299 PRINTS PR00625 DnaJ domain signature 61 80 1.2E-21 T 05-07-2017 IPR001623 DnaJ domain AC028_RS12425 ea32aa6cef7db4b24887985e24685003 299 PRINTS PR00625 DnaJ domain signature 7 25 1.2E-21 T 05-07-2017 IPR001623 DnaJ domain AC028_RS12425 ea32aa6cef7db4b24887985e24685003 299 Pfam PF01556 DnaJ C terminal domain 142 276 1.2E-27 T 05-07-2017 IPR002939 Chaperone DnaJ, C-terminal AC028_RS12425 ea32aa6cef7db4b24887985e24685003 299 SUPERFAMILY SSF46565 1 106 1.44E-30 T 05-07-2017 IPR001623 DnaJ domain AC028_RS12425 ea32aa6cef7db4b24887985e24685003 299 Pfam PF00226 DnaJ domain 5 66 6.8E-24 T 05-07-2017 IPR001623 DnaJ domain AC028_RS12425 ea32aa6cef7db4b24887985e24685003 299 SMART SM00271 4 61 2.4E-26 T 05-07-2017 IPR001623 DnaJ domain AC028_RS12425 ea32aa6cef7db4b24887985e24685003 299 SUPERFAMILY SSF49493 205 287 9.03E-16 T 05-07-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AC028_RS12425 ea32aa6cef7db4b24887985e24685003 299 Gene3D G3DSA:2.60.260.20 202 276 2.4E-14 T 05-07-2017 AC028_RS13450 befe6de0cc619f6c71c6be103c6b91a5 562 SUPERFAMILY SSF55190 4 112 6.02E-27 T 05-07-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AC028_RS13450 befe6de0cc619f6c71c6be103c6b91a5 562 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 6 92 8.0E-25 T 05-07-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AC028_RS13450 befe6de0cc619f6c71c6be103c6b91a5 562 SUPERFAMILY SSF47323 436 562 5.89E-35 T 05-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS13450 befe6de0cc619f6c71c6be103c6b91a5 562 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 562 25.535 T 05-07-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AC028_RS13450 befe6de0cc619f6c71c6be103c6b91a5 562 Pfam PF00750 tRNA synthetases class I (R) 103 410 9.9E-25 T 05-07-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AC028_RS13450 befe6de0cc619f6c71c6be103c6b91a5 562 SMART SM00836 441 562 3.2E-54 T 05-07-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AC028_RS13450 befe6de0cc619f6c71c6be103c6b91a5 562 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 28 562 1.2E-126 T 05-07-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AC028_RS13450 befe6de0cc619f6c71c6be103c6b91a5 562 SUPERFAMILY SSF52374 117 452 3.66E-89 T 05-07-2017 AC028_RS13450 befe6de0cc619f6c71c6be103c6b91a5 562 Gene3D G3DSA:3.40.50.620 117 446 1.2E-105 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS13450 befe6de0cc619f6c71c6be103c6b91a5 562 Gene3D G3DSA:1.10.730.10 447 562 4.7E-42 T 05-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS13450 befe6de0cc619f6c71c6be103c6b91a5 562 Pfam PF05746 DALR anticodon binding domain 441 562 7.7E-36 T 05-07-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AC028_RS13450 befe6de0cc619f6c71c6be103c6b91a5 562 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 131 140 - T 05-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS13450 befe6de0cc619f6c71c6be103c6b91a5 562 SMART SM01016 3 92 2.3E-38 T 05-07-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AC028_RS13450 befe6de0cc619f6c71c6be103c6b91a5 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 160 173 1.9E-22 T 05-07-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AC028_RS13450 befe6de0cc619f6c71c6be103c6b91a5 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 136 152 1.9E-22 T 05-07-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AC028_RS13450 befe6de0cc619f6c71c6be103c6b91a5 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 121 136 1.9E-22 T 05-07-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AC028_RS13450 befe6de0cc619f6c71c6be103c6b91a5 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 308 329 1.9E-22 T 05-07-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AC028_RS13450 befe6de0cc619f6c71c6be103c6b91a5 562 Gene3D G3DSA:3.30.1360.70 4 111 7.6E-31 T 05-07-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AC028_RS13185 31a722c1f4027534f600bd0c527ead5e 122 Pfam PF00072 Response regulator receiver domain 8 115 2.7E-18 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS13185 31a722c1f4027534f600bd0c527ead5e 122 Gene3D G3DSA:3.40.50.2300 2 117 6.2E-29 T 05-07-2017 AC028_RS13185 31a722c1f4027534f600bd0c527ead5e 122 SUPERFAMILY SSF52172 4 118 2.7E-25 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS13185 31a722c1f4027534f600bd0c527ead5e 122 SMART SM00448 5 115 2.1E-21 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS19290 97bdd7cf3140746ed0979a467fdcf633 603 Pfam PF11737 Protein of unknown function (DUF3300) 57 306 1.4E-61 T 05-07-2017 IPR021728 Protein of unknown function DUF3300 AC028_RS10420 0ef3e87940949efe9a354a9dfa9bf64b 466 SUPERFAMILY SSF46785 3 76 1.69E-17 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS10420 0ef3e87940949efe9a354a9dfa9bf64b 466 Pfam PF00155 Aminotransferase class I and II 129 459 1.4E-38 T 05-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AC028_RS10420 0ef3e87940949efe9a354a9dfa9bf64b 466 Gene3D G3DSA:1.10.10.10 3 67 6.8E-21 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS10420 0ef3e87940949efe9a354a9dfa9bf64b 466 SUPERFAMILY SSF53383 94 464 1.61E-94 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS10420 0ef3e87940949efe9a354a9dfa9bf64b 466 SMART SM00345 7 66 9.5E-16 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS10420 0ef3e87940949efe9a354a9dfa9bf64b 466 Gene3D G3DSA:3.90.1150.10 328 463 8.4E-20 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS10420 0ef3e87940949efe9a354a9dfa9bf64b 466 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 1.4E-14 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS10420 0ef3e87940949efe9a354a9dfa9bf64b 466 Gene3D G3DSA:3.40.640.10 122 327 1.5E-51 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS19110 70f0b1c976bc4a819832f2d954830864 290 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 163 227 7.0E-21 T 05-07-2017 IPR017703 YgfZ/GcvT conserved site AC028_RS19110 70f0b1c976bc4a819832f2d954830864 290 Pfam PF01571 Aminomethyltransferase folate-binding domain 18 97 1.2E-6 T 05-07-2017 IPR006222 Glycine cleavage T-protein-like, N-terminal AC028_RS19110 70f0b1c976bc4a819832f2d954830864 290 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 202 283 3.5E-6 T 05-07-2017 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AC028_RS19110 70f0b1c976bc4a819832f2d954830864 290 Gene3D G3DSA:3.30.70.1400 19 102 5.7E-17 T 05-07-2017 AC028_RS19110 70f0b1c976bc4a819832f2d954830864 290 SUPERFAMILY SSF103025 11 218 3.45E-43 T 05-07-2017 AC028_RS04875 267f19ba8b851d7f40f474a689bb4bac 2375 SUPERFAMILY SSF51126 45 302 1.95E-25 T 05-07-2017 IPR011050 Pectin lyase fold/virulence factor AC028_RS04875 267f19ba8b851d7f40f474a689bb4bac 2375 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 77 151 3.2E-23 T 05-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AC028_RS04875 267f19ba8b851d7f40f474a689bb4bac 2375 Gene3D G3DSA:2.160.20.10 78 259 4.1E-16 T 05-07-2017 IPR012334 Pectin lyase fold AC028_RS04875 267f19ba8b851d7f40f474a689bb4bac 2375 Gene3D G3DSA:2.160.20.10 295 347 4.1E-16 T 05-07-2017 IPR012334 Pectin lyase fold AC028_RS04875 267f19ba8b851d7f40f474a689bb4bac 2375 Pfam PF05860 haemagglutination activity domain 46 154 1.0E-18 T 05-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AC028_RS04875 267f19ba8b851d7f40f474a689bb4bac 2375 SMART SM00912 42 155 3.0E-27 T 05-07-2017 IPR008638 Filamentous haemagglutinin, N-terminal AC028_RS19730 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 Pfam PF13432 Tetratricopeptide repeat 190 251 0.0018 T 05-07-2017 AC028_RS19730 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 Pfam PF13432 Tetratricopeptide repeat 116 167 0.0023 T 05-07-2017 AC028_RS19730 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 SUPERFAMILY SSF81901 44 276 2.48E-18 T 05-07-2017 AC028_RS19730 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 9 390 35.069 T 05-07-2017 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 AC028_RS19730 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 SMART SM00028 40 73 56.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS19730 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 SMART SM00028 112 145 45.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS19730 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 SMART SM00028 185 218 150.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS19730 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 SMART SM00028 219 252 130.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS19730 7ba49a2b0ef7a7530aaa80eec2c6ceef 392 Gene3D G3DSA:1.25.40.10 45 291 1.9E-26 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS09330 6d886c364f1d1074fd325a244185c9e9 957 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 33 957 6.0E-243 T 05-07-2017 IPR010104 Bacterial TonB-dependent receptor AC028_RS09330 6d886c364f1d1074fd325a244185c9e9 957 SUPERFAMILY SSF56935 324 529 1.34E-76 T 05-07-2017 AC028_RS09330 6d886c364f1d1074fd325a244185c9e9 957 SUPERFAMILY SSF56935 791 957 1.34E-76 T 05-07-2017 AC028_RS09330 6d886c364f1d1074fd325a244185c9e9 957 SUPERFAMILY SSF56935 585 757 1.34E-76 T 05-07-2017 AC028_RS09330 6d886c364f1d1074fd325a244185c9e9 957 SUPERFAMILY SSF56935 28 230 1.34E-76 T 05-07-2017 AC028_RS09330 6d886c364f1d1074fd325a244185c9e9 957 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 940 957 - T 05-07-2017 IPR010917 TonB-dependent receptor, conserved site AC028_RS09330 6d886c364f1d1074fd325a244185c9e9 957 Gene3D G3DSA:2.40.170.20 168 238 2.5E-53 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS09330 6d886c364f1d1074fd325a244185c9e9 957 Gene3D G3DSA:2.40.170.20 323 524 2.5E-53 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS09330 6d886c364f1d1074fd325a244185c9e9 957 Gene3D G3DSA:2.40.170.20 595 957 2.5E-53 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS09330 6d886c364f1d1074fd325a244185c9e9 957 Gene3D G3DSA:2.170.130.10 53 167 5.4E-16 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS09330 6d886c364f1d1074fd325a244185c9e9 957 Pfam PF00593 TonB dependent receptor 667 954 2.3E-24 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS09330 6d886c364f1d1074fd325a244185c9e9 957 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 163 8.4E-14 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS16255 0a23f9aa35351e60d7ebaae68cd2c364 197 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 179 4.2E-56 T 05-07-2017 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AC028_RS16255 0a23f9aa35351e60d7ebaae68cd2c364 197 Pfam PF03641 Possible lysine decarboxylase 46 165 5.3E-38 T 05-07-2017 IPR031100 LOG family AC028_RS16255 0a23f9aa35351e60d7ebaae68cd2c364 197 Gene3D G3DSA:3.40.50.450 2 188 5.9E-67 T 05-07-2017 AC028_RS16255 0a23f9aa35351e60d7ebaae68cd2c364 197 SUPERFAMILY SSF102405 1 179 9.92E-62 T 05-07-2017 AC028_RS16960 eaad0d27eeae116e73de01f373d9d7d4 426 PIRSF PIRSF001529 1 426 8.7E-168 T 05-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AC028_RS16960 eaad0d27eeae116e73de01f373d9d7d4 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 424 39.425 T 05-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AC028_RS16960 eaad0d27eeae116e73de01f373d9d7d4 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 419 2.3E-162 T 05-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AC028_RS16960 eaad0d27eeae116e73de01f373d9d7d4 426 SUPERFAMILY SSF46589 1 113 3.5E-27 T 05-07-2017 IPR010978 tRNA-binding arm GO:0000166 AC028_RS16960 eaad0d27eeae116e73de01f373d9d7d4 426 Gene3D G3DSA:3.30.930.10 106 423 3.6E-140 T 05-07-2017 AC028_RS16960 eaad0d27eeae116e73de01f373d9d7d4 426 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 2.4E-33 T 05-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AC028_RS16960 eaad0d27eeae116e73de01f373d9d7d4 426 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 2.4E-33 T 05-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AC028_RS16960 eaad0d27eeae116e73de01f373d9d7d4 426 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 2.4E-33 T 05-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AC028_RS16960 eaad0d27eeae116e73de01f373d9d7d4 426 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 2.4E-33 T 05-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AC028_RS16960 eaad0d27eeae116e73de01f373d9d7d4 426 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 2.4E-33 T 05-07-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AC028_RS16960 eaad0d27eeae116e73de01f373d9d7d4 426 Gene3D G3DSA:1.10.287.40 1 105 1.7E-24 T 05-07-2017 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AC028_RS16960 eaad0d27eeae116e73de01f373d9d7d4 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 3.3E-30 T 05-07-2017 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AC028_RS16960 eaad0d27eeae116e73de01f373d9d7d4 426 SUPERFAMILY SSF55681 117 423 1.99E-98 T 05-07-2017 AC028_RS16960 eaad0d27eeae116e73de01f373d9d7d4 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 225 402 1.3E-33 T 05-07-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS11440 3b4bf45185d24a3e9907d44db5b23c41 161 SUPERFAMILY SSF53774 1 156 6.02E-33 T 05-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 AC028_RS11440 3b4bf45185d24a3e9907d44db5b23c41 161 PIRSF PIRSF500176 1 160 2.7E-22 T 05-07-2017 AC028_RS11440 3b4bf45185d24a3e9907d44db5b23c41 161 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 8.9E-6 T 05-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 AC028_RS11440 3b4bf45185d24a3e9907d44db5b23c41 161 PRINTS PR00139 Asparaginase/glutaminase family signature 75 93 8.9E-6 T 05-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 AC028_RS11440 3b4bf45185d24a3e9907d44db5b23c41 161 PIRSF PIRSF001220 1 161 1.4E-20 T 05-07-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 AC028_RS11440 3b4bf45185d24a3e9907d44db5b23c41 161 Gene3D G3DSA:3.40.50.1170 2 158 1.3E-29 T 05-07-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AC028_RS11440 3b4bf45185d24a3e9907d44db5b23c41 161 Pfam PF00710 Asparaginase, N-terminal 4 155 1.6E-23 T 05-07-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AC028_RS03815 e31fd370c992aeaceb534c29b7c817b9 948 PRINTS PR00723 Subtilisin serine protease family (S8) signature 130 143 4.2E-14 T 05-07-2017 IPR015500 Peptidase S8, subtilisin-related AC028_RS03815 e31fd370c992aeaceb534c29b7c817b9 948 PRINTS PR00723 Subtilisin serine protease family (S8) signature 89 108 4.2E-14 T 05-07-2017 IPR015500 Peptidase S8, subtilisin-related AC028_RS03815 e31fd370c992aeaceb534c29b7c817b9 948 PRINTS PR00723 Subtilisin serine protease family (S8) signature 326 342 4.2E-14 T 05-07-2017 IPR015500 Peptidase S8, subtilisin-related AC028_RS03815 e31fd370c992aeaceb534c29b7c817b9 948 Gene3D G3DSA:2.160.20.20 404 641 1.6E-5 T 05-07-2017 IPR012332 P22 tailspike C-terminal domain-like AC028_RS03815 e31fd370c992aeaceb534c29b7c817b9 948 Gene3D G3DSA:2.40.128.130 682 948 2.3E-34 T 05-07-2017 IPR005546 Autotransporter beta-domain AC028_RS03815 e31fd370c992aeaceb534c29b7c817b9 948 SUPERFAMILY SSF103515 647 948 2.22E-35 T 05-07-2017 IPR005546 Autotransporter beta-domain AC028_RS03815 e31fd370c992aeaceb534c29b7c817b9 948 Gene3D G3DSA:3.40.50.200 56 385 1.2E-62 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS03815 e31fd370c992aeaceb534c29b7c817b9 948 Pfam PF00082 Subtilase family 89 377 9.7E-36 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS03815 e31fd370c992aeaceb534c29b7c817b9 948 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 327 337 - T 05-07-2017 IPR023828 Peptidase S8, subtilisin, Ser-active site AC028_RS03815 e31fd370c992aeaceb534c29b7c817b9 948 SUPERFAMILY SSF52743 71 387 3.14E-58 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS03815 e31fd370c992aeaceb534c29b7c817b9 948 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 94 105 - T 05-07-2017 IPR023827 Peptidase S8, subtilisin, Asp-active site AC028_RS03815 e31fd370c992aeaceb534c29b7c817b9 948 Pfam PF12951 Passenger-associated-transport-repeat 417 446 6.0E-8 T 05-07-2017 IPR013425 Autotransporter-associated beta strand repeat AC028_RS03815 e31fd370c992aeaceb534c29b7c817b9 948 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 416 446 3.1E-11 T 05-07-2017 IPR013425 Autotransporter-associated beta strand repeat AC028_RS03815 e31fd370c992aeaceb534c29b7c817b9 948 SMART SM00869 682 938 1.3E-24 T 05-07-2017 IPR005546 Autotransporter beta-domain AC028_RS03815 e31fd370c992aeaceb534c29b7c817b9 948 Pfam PF03797 Autotransporter beta-domain 686 929 2.6E-36 T 05-07-2017 IPR005546 Autotransporter beta-domain AC028_RS02420 a739cec4582e06c58beb3ef2badd61ae 666 ProSitePatterns PS00802 Transketolase signature 2. 470 486 - T 05-07-2017 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AC028_RS02420 a739cec4582e06c58beb3ef2badd61ae 666 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 05-07-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AC028_RS02420 a739cec4582e06c58beb3ef2badd61ae 666 SUPERFAMILY SSF52518 6 320 4.13E-120 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS02420 a739cec4582e06c58beb3ef2badd61ae 666 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 666 5.7E-285 T 05-07-2017 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AC028_RS02420 a739cec4582e06c58beb3ef2badd61ae 666 Pfam PF02779 Transketolase, pyrimidine binding domain 356 528 1.8E-43 T 05-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain AC028_RS02420 a739cec4582e06c58beb3ef2badd61ae 666 SUPERFAMILY SSF52518 348 529 1.3E-63 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS02420 a739cec4582e06c58beb3ef2badd61ae 666 SMART SM00861 357 529 1.1E-63 T 05-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain AC028_RS02420 a739cec4582e06c58beb3ef2badd61ae 666 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 336 1.1E-153 T 05-07-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AC028_RS02420 a739cec4582e06c58beb3ef2badd61ae 666 SUPERFAMILY SSF52922 536 666 3.27E-42 T 05-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AC028_RS02420 a739cec4582e06c58beb3ef2badd61ae 666 Pfam PF02780 Transketolase, C-terminal domain 553 659 4.4E-18 T 05-07-2017 IPR033248 Transketolase, C-terminal domain AC028_RS02420 a739cec4582e06c58beb3ef2badd61ae 666 Gene3D G3DSA:3.40.50.920 541 666 1.4E-49 T 05-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AC028_RS02420 a739cec4582e06c58beb3ef2badd61ae 666 Gene3D G3DSA:3.40.50.970 6 320 2.4E-129 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS02420 a739cec4582e06c58beb3ef2badd61ae 666 Gene3D G3DSA:3.40.50.970 330 537 1.4E-73 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS02585 f7499229c1918322d267880d03c2a0f1 199 Gene3D G3DSA:3.90.950.10 1 195 2.3E-73 T 05-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like AC028_RS02585 f7499229c1918322d267880d03c2a0f1 199 Pfam PF01725 Ham1 family 4 191 1.2E-49 T 05-07-2017 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 AC028_RS02585 f7499229c1918322d267880d03c2a0f1 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 194 1.6E-52 T 05-07-2017 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 AC028_RS02585 f7499229c1918322d267880d03c2a0f1 199 SUPERFAMILY SSF52972 1 194 1.54E-68 T 05-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like AC028_RS02585 f7499229c1918322d267880d03c2a0f1 199 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 49.787 T 05-07-2017 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AC028_RS05480 ab75534470da70657823f50b4924455a 448 Pfam PF00158 Sigma-54 interaction domain 143 310 1.2E-68 T 05-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AC028_RS05480 ab75534470da70657823f50b4924455a 448 Gene3D G3DSA:1.10.8.60 316 388 6.7E-23 T 05-07-2017 AC028_RS05480 ab75534470da70657823f50b4924455a 448 SUPERFAMILY SSF52540 143 384 1.41E-71 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS05480 ab75534470da70657823f50b4924455a 448 Pfam PF00072 Response regulator receiver domain 4 115 7.0E-23 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS05480 ab75534470da70657823f50b4924455a 448 Gene3D G3DSA:1.10.10.60 391 448 3.0E-19 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS05480 ab75534470da70657823f50b4924455a 448 Gene3D G3DSA:3.40.50.2300 1 124 6.0E-32 T 05-07-2017 AC028_RS05480 ab75534470da70657823f50b4924455a 448 Gene3D G3DSA:3.40.50.300 140 315 6.5E-61 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS05480 ab75534470da70657823f50b4924455a 448 SUPERFAMILY SSF52172 1 187 9.39E-38 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS05480 ab75534470da70657823f50b4924455a 448 SMART SM00448 2 115 1.1E-29 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS05480 ab75534470da70657823f50b4924455a 448 SMART SM00382 163 306 6.7E-11 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS05480 ab75534470da70657823f50b4924455a 448 Pfam PF02954 Bacterial regulatory protein, Fis family 406 446 5.3E-15 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS05480 ab75534470da70657823f50b4924455a 448 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 05-07-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AC028_RS05480 ab75534470da70657823f50b4924455a 448 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 05-07-2017 IPR025944 Sigma-54 interaction domain, conserved site AC028_RS05480 ab75534470da70657823f50b4924455a 448 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 448 2.4E-13 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS05480 ab75534470da70657823f50b4924455a 448 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 412 429 2.4E-13 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS05480 ab75534470da70657823f50b4924455a 448 SUPERFAMILY SSF46689 352 448 7.62E-16 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS21540 67293316104edf5e80d46a93b874514a 918 ProSitePatterns PS01176 Initiation factor 2 signature. 869 891 - T 05-07-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AC028_RS21540 67293316104edf5e80d46a93b874514a 918 SUPERFAMILY SSF52156 701 825 1.05E-33 T 05-07-2017 IPR023115 Translation initiation factor IF- 2, domain 3 AC028_RS21540 67293316104edf5e80d46a93b874514a 918 Gene3D G3DSA:3.40.50.300 412 577 1.2E-45 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS21540 67293316104edf5e80d46a93b874514a 918 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 12 916 16.785 T 05-07-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AC028_RS21540 67293316104edf5e80d46a93b874514a 918 SUPERFAMILY SSF50447 590 673 3.33E-24 T 05-07-2017 IPR009000 Translation protein, beta-barrel domain AC028_RS21540 67293316104edf5e80d46a93b874514a 918 SUPERFAMILY SSF46955 18 66 1.12E-8 T 05-07-2017 IPR009061 Putative DNA-binding domain AC028_RS21540 67293316104edf5e80d46a93b874514a 918 Gene3D G3DSA:3.40.50.10050 718 796 1.6E-25 T 05-07-2017 IPR023115 Translation initiation factor IF- 2, domain 3 AC028_RS21540 67293316104edf5e80d46a93b874514a 918 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 341 391 2.2E-14 T 05-07-2017 IPR006847 Translation initiation factor IF-2, N-terminal AC028_RS21540 67293316104edf5e80d46a93b874514a 918 Gene3D G3DSA:2.40.30.10 820 916 3.5E-36 T 05-07-2017 AC028_RS21540 67293316104edf5e80d46a93b874514a 918 Pfam PF00009 Elongation factor Tu GTP binding domain 422 577 2.9E-33 T 05-07-2017 AC028_RS21540 67293316104edf5e80d46a93b874514a 918 Gene3D G3DSA:2.40.30.10 590 681 8.6E-21 T 05-07-2017 AC028_RS21540 67293316104edf5e80d46a93b874514a 918 SUPERFAMILY SSF50447 820 916 8.94E-32 T 05-07-2017 IPR009000 Translation protein, beta-barrel domain AC028_RS21540 67293316104edf5e80d46a93b874514a 918 SUPERFAMILY SSF52540 414 584 1.62E-50 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS21540 67293316104edf5e80d46a93b874514a 918 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 335 918 1.2E-245 T 05-07-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AC028_RS21540 67293316104edf5e80d46a93b874514a 918 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 84 119 2.5E-8 T 05-07-2017 IPR013575 Initiation factor 2 associated domain, bacterial AC028_RS21540 67293316104edf5e80d46a93b874514a 918 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 419 576 1.8E-31 T 05-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AC028_RS21540 67293316104edf5e80d46a93b874514a 918 Pfam PF11987 Translation-initiation factor 2 704 808 5.3E-35 T 05-07-2017 IPR023115 Translation initiation factor IF- 2, domain 3 AC028_RS21540 67293316104edf5e80d46a93b874514a 918 Gene3D G3DSA:3.30.56.50 17 66 1.6E-21 T 05-07-2017 AC028_RS11005 7aed8ead1d88e307e5b4df8003b222df 248 Pfam PF00005 ABC transporter 21 161 5.3E-33 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS11005 7aed8ead1d88e307e5b4df8003b222df 248 SUPERFAMILY SSF52540 13 231 4.61E-63 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11005 7aed8ead1d88e307e5b4df8003b222df 248 SMART SM00382 30 212 3.4E-17 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS11005 7aed8ead1d88e307e5b4df8003b222df 248 Gene3D G3DSA:3.40.50.300 8 215 1.9E-63 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11005 7aed8ead1d88e307e5b4df8003b222df 248 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS13210 8e6153b2ac79c4db7b45d7d42321f5a2 458 SMART SM00963 1 86 7.4E-35 T 05-07-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AC028_RS13210 8e6153b2ac79c4db7b45d7d42321f5a2 458 Pfam PF02978 Signal peptide binding domain 328 427 6.3E-33 T 05-07-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AC028_RS13210 8e6153b2ac79c4db7b45d7d42321f5a2 458 SMART SM00962 100 296 3.2E-114 T 05-07-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AC028_RS13210 8e6153b2ac79c4db7b45d7d42321f5a2 458 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 05-07-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AC028_RS13210 8e6153b2ac79c4db7b45d7d42321f5a2 458 Pfam PF00448 SRP54-type protein, GTPase domain 101 295 1.4E-73 T 05-07-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AC028_RS13210 8e6153b2ac79c4db7b45d7d42321f5a2 458 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 33.973 T 05-07-2017 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 AC028_RS13210 8e6153b2ac79c4db7b45d7d42321f5a2 458 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.5E-20 T 05-07-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AC028_RS13210 8e6153b2ac79c4db7b45d7d42321f5a2 458 Gene3D G3DSA:3.40.50.300 94 297 1.0E-75 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS13210 8e6153b2ac79c4db7b45d7d42321f5a2 458 SUPERFAMILY SSF47446 328 430 5.4E-37 T 05-07-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AC028_RS13210 8e6153b2ac79c4db7b45d7d42321f5a2 458 Gene3D G3DSA:1.10.260.30 328 431 1.4E-39 T 05-07-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AC028_RS13210 8e6153b2ac79c4db7b45d7d42321f5a2 458 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 428 6.3E-176 T 05-07-2017 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AC028_RS13210 8e6153b2ac79c4db7b45d7d42321f5a2 458 SUPERFAMILY SSF52540 42 353 1.38E-52 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS13210 8e6153b2ac79c4db7b45d7d42321f5a2 458 SMART SM00382 99 301 8.4E-11 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS13210 8e6153b2ac79c4db7b45d7d42321f5a2 458 Gene3D G3DSA:1.20.120.140 2 88 1.5E-32 T 05-07-2017 AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 Pfam PF02785 Biotin carboxylase C-terminal domain 66 170 6.0E-34 T 05-07-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 Pfam PF02626 Allophanate hydrolase subunit 2 202 482 5.5E-88 T 05-07-2017 IPR003778 Carboxyltransferase domain, subdomain A and B AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 SUPERFAMILY SSF160467 540 632 1.24E-18 T 05-07-2017 AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 SMART SM00797 201 499 5.9E-171 T 05-07-2017 IPR003778 Carboxyltransferase domain, subdomain A and B AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 888 905 - T 05-07-2017 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 SMART SM00796 538 770 1.3E-106 T 05-07-2017 IPR003833 Carboxyltransferase domain, subdomain C and D AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 Pfam PF02682 Allophanate hydrolase subunit 1 539 756 9.4E-47 T 05-07-2017 IPR003833 Carboxyltransferase domain, subdomain C and D AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 SUPERFAMILY SSF51246 60 172 1.2E-35 T 05-07-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 2 931 0.0 T 05-07-2017 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703 AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 17 24 - T 05-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 Gene3D G3DSA:2.40.100.10 655 794 6.3E-44 T 05-07-2017 IPR029000 Cyclophilin-like domain AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 Gene3D G3DSA:2.40.100.10 362 496 6.3E-31 T 05-07-2017 IPR029000 Cyclophilin-like domain AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 SUPERFAMILY SSF51230 862 931 2.22E-19 T 05-07-2017 IPR011053 Single hybrid motif AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 SUPERFAMILY SSF50891 363 489 2.5E-31 T 05-07-2017 IPR029000 Cyclophilin-like domain AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 2 51 6.0E-15 T 05-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 Pfam PF00364 Biotin-requiring enzyme 872 931 2.3E-15 T 05-07-2017 IPR000089 Biotin/lipoyl attachment AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 Gene3D G3DSA:2.40.50.100 863 931 4.8E-22 T 05-07-2017 AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 SMART SM00878 66 170 1.6E-51 T 05-07-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 SUPERFAMILY SSF50891 655 785 4.55E-26 T 05-07-2017 IPR029000 Cyclophilin-like domain AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 179 504 1.1E-99 T 05-07-2017 IPR003778 Carboxyltransferase domain, subdomain A and B AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 Gene3D G3DSA:3.30.470.20 2 171 1.9E-56 T 05-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 Gene3D G3DSA:3.30.1360.40 539 618 2.4E-25 T 05-07-2017 IPR024946 Arginine repressor C-terminal-like domain AC028_RS06710 a7cb2f51c949b6d26431260dc463ad67 943 SUPERFAMILY SSF56059 6 82 1.45E-14 T 05-07-2017 AC028_RS20330 8b12d6e26ac3b71c173adb30c50808d4 186 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 18 186 34.079 T 05-07-2017 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 AC028_RS20330 8b12d6e26ac3b71c173adb30c50808d4 186 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 20 184 3.3E-61 T 05-07-2017 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 AC028_RS20330 8b12d6e26ac3b71c173adb30c50808d4 186 Gene3D G3DSA:3.40.50.2020 20 184 3.3E-60 T 05-07-2017 IPR029057 Phosphoribosyltransferase-like AC028_RS20330 8b12d6e26ac3b71c173adb30c50808d4 186 SUPERFAMILY SSF53271 20 178 1.97E-46 T 05-07-2017 IPR029057 Phosphoribosyltransferase-like AC028_RS20330 8b12d6e26ac3b71c173adb30c50808d4 186 Pfam PF00156 Phosphoribosyl transferase domain 65 167 8.8E-18 T 05-07-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 AC028_RS12675 5362427d3fe96c31015e12ae07c1a75d 114 SUPERFAMILY SSF51182 15 102 5.85E-20 T 05-07-2017 IPR011051 RmlC-like cupin domain AC028_RS12675 5362427d3fe96c31015e12ae07c1a75d 114 Gene3D G3DSA:2.60.120.10 11 102 5.6E-26 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS12675 5362427d3fe96c31015e12ae07c1a75d 114 Pfam PF07883 Cupin domain 26 94 2.6E-17 T 05-07-2017 IPR013096 Cupin 2, conserved barrel AC028_RS22215 17e4317c648c4ad927cff0b7bf43e798 230 Pfam PF00072 Response regulator receiver domain 8 117 8.4E-24 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS22215 17e4317c648c4ad927cff0b7bf43e798 230 SMART SM00862 151 228 2.9E-22 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS22215 17e4317c648c4ad927cff0b7bf43e798 230 Gene3D G3DSA:1.10.10.10 136 229 1.7E-24 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS22215 17e4317c648c4ad927cff0b7bf43e798 230 Gene3D G3DSA:3.40.50.2300 3 124 7.0E-37 T 05-07-2017 AC028_RS22215 17e4317c648c4ad927cff0b7bf43e798 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 228 8.3E-21 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS22215 17e4317c648c4ad927cff0b7bf43e798 230 SUPERFAMILY SSF52172 4 125 1.57E-39 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS22215 17e4317c648c4ad927cff0b7bf43e798 230 SUPERFAMILY SSF46894 136 229 7.65E-23 T 05-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AC028_RS22215 17e4317c648c4ad927cff0b7bf43e798 230 SMART SM00448 6 116 4.4E-40 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS04785 7f4b255d6160ee7ddab7088c1899e3b3 95 SUPERFAMILY SSF54637 4 93 1.15E-15 T 05-07-2017 IPR029069 HotDog domain AC028_RS04785 7f4b255d6160ee7ddab7088c1899e3b3 95 Pfam PF07977 FabA-like domain 6 60 6.0E-7 T 05-07-2017 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AC028_RS04785 7f4b255d6160ee7ddab7088c1899e3b3 95 Gene3D G3DSA:3.10.129.10 5 93 1.7E-14 T 05-07-2017 IPR029069 HotDog domain AC028_RS18205 c7fbdef93c15f88325c98697d65a958d 763 Pfam PF00672 HAMP domain 195 263 1.2E-14 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18205 c7fbdef93c15f88325c98697d65a958d 763 SUPERFAMILY SSF158472 214 263 4.32E-9 T 05-07-2017 AC028_RS18205 c7fbdef93c15f88325c98697d65a958d 763 SMART SM00283 448 695 5.9E-87 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18205 c7fbdef93c15f88325c98697d65a958d 763 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 546 573 2.9E-60 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18205 c7fbdef93c15f88325c98697d65a958d 763 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 575 604 2.9E-60 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18205 c7fbdef93c15f88325c98697d65a958d 763 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 188 213 2.9E-60 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18205 c7fbdef93c15f88325c98697d65a958d 763 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 469 498 2.9E-60 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18205 c7fbdef93c15f88325c98697d65a958d 763 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 623 652 2.9E-60 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18205 c7fbdef93c15f88325c98697d65a958d 763 Gene3D G3DSA:1.10.287.950 463 667 1.3E-60 T 05-07-2017 AC028_RS18205 c7fbdef93c15f88325c98697d65a958d 763 SMART SM00304 214 266 1.8E-9 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18205 c7fbdef93c15f88325c98697d65a958d 763 SMART SM00304 395 447 16.0 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18205 c7fbdef93c15f88325c98697d65a958d 763 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 185 1.9E-21 T 05-07-2017 IPR024478 4HB MCP domain AC028_RS18205 c7fbdef93c15f88325c98697d65a958d 763 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 500 694 3.5E-61 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18205 c7fbdef93c15f88325c98697d65a958d 763 SUPERFAMILY SSF58104 415 696 6.67E-70 T 05-07-2017 AC028_RS09815 d2eae9ec750c835c635504a20a3c8bca 245 Gene3D G3DSA:3.40.50.2300 3 121 1.6E-37 T 05-07-2017 AC028_RS09815 d2eae9ec750c835c635504a20a3c8bca 245 SMART SM00448 6 117 7.0E-33 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS09815 d2eae9ec750c835c635504a20a3c8bca 245 Pfam PF00072 Response regulator receiver domain 8 117 7.3E-28 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS09815 d2eae9ec750c835c635504a20a3c8bca 245 Gene3D G3DSA:2.40.50.40 140 202 8.0E-12 T 05-07-2017 AC028_RS09815 d2eae9ec750c835c635504a20a3c8bca 245 Pfam PF04397 LytTr DNA-binding domain 148 242 1.3E-23 T 05-07-2017 IPR007492 LytTR DNA-binding domain GO:0003677 AC028_RS09815 d2eae9ec750c835c635504a20a3c8bca 245 SMART SM00850 146 243 2.8E-25 T 05-07-2017 IPR007492 LytTR DNA-binding domain GO:0003677 AC028_RS09815 d2eae9ec750c835c635504a20a3c8bca 245 SUPERFAMILY SSF52172 5 122 2.85E-36 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS03470 2912ff996197032292257a088aa2d35a 95 SUPERFAMILY SSF47598 48 89 2.67E-8 T 05-07-2017 IPR010985 Ribbon-helix-helix GO:0006355 AC028_RS03470 2912ff996197032292257a088aa2d35a 95 Gene3D G3DSA:1.10.1220.10 48 84 1.2E-6 T 05-07-2017 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AC028_RS19470 31a7f26f554762d871783fe379bb4881 508 Gene3D G3DSA:3.50.50.60 394 407 8.8E-79 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19470 31a7f26f554762d871783fe379bb4881 508 Gene3D G3DSA:3.50.50.60 202 299 8.8E-79 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19470 31a7f26f554762d871783fe379bb4881 508 Gene3D G3DSA:3.50.50.60 440 506 8.8E-79 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19470 31a7f26f554762d871783fe379bb4881 508 Gene3D G3DSA:3.50.50.60 7 130 8.8E-79 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19470 31a7f26f554762d871783fe379bb4881 508 Pfam PF05199 GMC oxidoreductase 385 500 1.7E-23 T 05-07-2017 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AC028_RS19470 31a7f26f554762d871783fe379bb4881 508 SUPERFAMILY SSF54373 270 437 1.8E-8 T 05-07-2017 AC028_RS19470 31a7f26f554762d871783fe379bb4881 508 SUPERFAMILY SSF51905 446 506 7.56E-63 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19470 31a7f26f554762d871783fe379bb4881 508 SUPERFAMILY SSF51905 9 297 7.56E-63 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19470 31a7f26f554762d871783fe379bb4881 508 Pfam PF00732 GMC oxidoreductase 11 298 7.5E-16 T 05-07-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AC028_RS05515 5eaba867edddda04bb868665a07f5d6b 338 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 253 333 1.6E-18 T 05-07-2017 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AC028_RS05515 5eaba867edddda04bb868665a07f5d6b 338 Gene3D G3DSA:3.40.47.10 188 338 3.3E-28 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS05515 5eaba867edddda04bb868665a07f5d6b 338 Gene3D G3DSA:3.40.47.10 4 187 5.1E-35 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS05515 5eaba867edddda04bb868665a07f5d6b 338 SUPERFAMILY SSF53901 46 338 2.71E-39 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS05515 5eaba867edddda04bb868665a07f5d6b 338 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 195 1.2E-7 T 05-07-2017 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AC028_RS08400 c18ed6d4ca8b2d707023ca0b4a5557d3 543 Gene3D G3DSA:1.10.560.10 3 188 6.7E-49 T 05-07-2017 IPR027413 GroEL-like equatorial domain AC028_RS08400 c18ed6d4ca8b2d707023ca0b4a5557d3 543 SUPERFAMILY SSF54849 137 203 2.52E-24 T 05-07-2017 AC028_RS08400 c18ed6d4ca8b2d707023ca0b4a5557d3 543 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 1.4E-97 T 05-07-2017 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AC028_RS08400 c18ed6d4ca8b2d707023ca0b4a5557d3 543 SUPERFAMILY SSF52029 184 376 5.93E-82 T 05-07-2017 IPR027409 GroEL-like apical domain AC028_RS08400 c18ed6d4ca8b2d707023ca0b4a5557d3 543 PRINTS PR00298 60kDa chaperonin signature 398 419 1.6E-74 T 05-07-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 AC028_RS08400 c18ed6d4ca8b2d707023ca0b4a5557d3 543 PRINTS PR00298 60kDa chaperonin signature 83 110 1.6E-74 T 05-07-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 AC028_RS08400 c18ed6d4ca8b2d707023ca0b4a5557d3 543 PRINTS PR00298 60kDa chaperonin signature 268 291 1.6E-74 T 05-07-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 AC028_RS08400 c18ed6d4ca8b2d707023ca0b4a5557d3 543 PRINTS PR00298 60kDa chaperonin signature 27 53 1.6E-74 T 05-07-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 AC028_RS08400 c18ed6d4ca8b2d707023ca0b4a5557d3 543 PRINTS PR00298 60kDa chaperonin signature 350 375 1.6E-74 T 05-07-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 AC028_RS08400 c18ed6d4ca8b2d707023ca0b4a5557d3 543 SUPERFAMILY SSF48592 406 521 4.05E-79 T 05-07-2017 AC028_RS08400 c18ed6d4ca8b2d707023ca0b4a5557d3 543 SUPERFAMILY SSF48592 7 134 4.05E-79 T 05-07-2017 AC028_RS08400 c18ed6d4ca8b2d707023ca0b4a5557d3 543 Gene3D G3DSA:3.50.7.10 189 367 2.0E-98 T 05-07-2017 IPR027409 GroEL-like apical domain AC028_RS08400 c18ed6d4ca8b2d707023ca0b4a5557d3 543 Gene3D G3DSA:1.10.560.10 368 518 4.1E-41 T 05-07-2017 IPR027413 GroEL-like equatorial domain AC028_RS08400 c18ed6d4ca8b2d707023ca0b4a5557d3 543 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 2.2E-254 T 05-07-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 AC028_RS08400 c18ed6d4ca8b2d707023ca0b4a5557d3 543 Hamap MF_00600 60 kDa chaperonin [groL]. 2 541 41.487 T 05-07-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 AC028_RS08400 c18ed6d4ca8b2d707023ca0b4a5557d3 543 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 05-07-2017 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020 AC028_RS07020 5eb5d54dade1734a53b340c77c4de0a1 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 2.7E-107 T 05-07-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS07020 5eb5d54dade1734a53b340c77c4de0a1 366 SUPERFAMILY SSF55979 127 244 2.88E-29 T 05-07-2017 AC028_RS07020 5eb5d54dade1734a53b340c77c4de0a1 366 SUPERFAMILY SSF55979 1 116 1.21E-26 T 05-07-2017 AC028_RS07020 5eb5d54dade1734a53b340c77c4de0a1 366 Gene3D G3DSA:3.10.150.10 122 248 6.0E-38 T 05-07-2017 AC028_RS07020 5eb5d54dade1734a53b340c77c4de0a1 366 Gene3D G3DSA:3.10.150.10 1 121 9.3E-32 T 05-07-2017 AC028_RS07020 5eb5d54dade1734a53b340c77c4de0a1 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 3.2E-36 T 05-07-2017 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS07020 5eb5d54dade1734a53b340c77c4de0a1 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 365 2.0E-34 T 05-07-2017 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS07020 5eb5d54dade1734a53b340c77c4de0a1 366 SUPERFAMILY SSF55979 246 366 3.14E-34 T 05-07-2017 AC028_RS07020 5eb5d54dade1734a53b340c77c4de0a1 366 SMART SM00480 17 362 5.2E-137 T 05-07-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS07020 5eb5d54dade1734a53b340c77c4de0a1 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 118 1.4E-37 T 05-07-2017 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS07020 5eb5d54dade1734a53b340c77c4de0a1 366 Gene3D G3DSA:3.10.150.10 249 366 8.8E-37 T 05-07-2017 AC028_RS07020 5eb5d54dade1734a53b340c77c4de0a1 366 PIRSF PIRSF000804 1 366 2.0E-121 T 05-07-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS03010 18b2cfa38f0112eb93be19fe77dd3987 469 Gene3D G3DSA:2.30.40.10 32 155 7.3E-38 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS03010 18b2cfa38f0112eb93be19fe77dd3987 469 SUPERFAMILY SSF51338 413 450 8.35E-25 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS03010 18b2cfa38f0112eb93be19fe77dd3987 469 SUPERFAMILY SSF51338 35 97 8.35E-25 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS03010 18b2cfa38f0112eb93be19fe77dd3987 469 SUPERFAMILY SSF51556 96 413 2.04E-24 T 05-07-2017 IPR032466 Metal-dependent hydrolase AC028_RS03010 18b2cfa38f0112eb93be19fe77dd3987 469 Gene3D G3DSA:2.30.40.10 315 354 1.0E-25 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS03010 18b2cfa38f0112eb93be19fe77dd3987 469 Gene3D G3DSA:2.30.40.10 389 450 1.0E-25 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS03010 18b2cfa38f0112eb93be19fe77dd3987 469 Pfam PF01979 Amidohydrolase family 383 430 9.5E-10 T 05-07-2017 IPR006680 Amidohydrolase-related GO:0016787 AC028_RS18015 6856c7ca0cd1a97123c944f264db584b 378 Pfam PF00072 Response regulator receiver domain 30 142 8.1E-26 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS18015 6856c7ca0cd1a97123c944f264db584b 378 Gene3D G3DSA:1.10.3210.10 196 359 1.1E-22 T 05-07-2017 IPR006674 HD domain AC028_RS18015 6856c7ca0cd1a97123c944f264db584b 378 Pfam PF01966 HD domain 202 319 5.5E-19 T 05-07-2017 IPR006674 HD domain AC028_RS18015 6856c7ca0cd1a97123c944f264db584b 378 SUPERFAMILY SSF109604 170 356 3.66E-41 T 05-07-2017 AC028_RS18015 6856c7ca0cd1a97123c944f264db584b 378 SMART SM00471 192 329 2.4E-6 T 05-07-2017 IPR003607 HD/PDEase domain AC028_RS18015 6856c7ca0cd1a97123c944f264db584b 378 SMART SM00448 28 143 5.2E-30 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS18015 6856c7ca0cd1a97123c944f264db584b 378 Gene3D G3DSA:3.40.50.2300 27 185 2.9E-34 T 05-07-2017 AC028_RS18015 6856c7ca0cd1a97123c944f264db584b 378 SUPERFAMILY SSF52172 28 176 4.41E-36 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS16635 665439686af04be63352c27b9db21d23 711 Pfam PF01170 Putative RNA methylase family UPF0020 161 372 1.2E-39 T 05-07-2017 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AC028_RS16635 665439686af04be63352c27b9db21d23 711 Pfam PF02926 THUMP domain 30 152 5.0E-10 T 05-07-2017 IPR004114 THUMP domain GO:0003723 AC028_RS16635 665439686af04be63352c27b9db21d23 711 SUPERFAMILY SSF53335 262 375 1.3E-37 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS16635 665439686af04be63352c27b9db21d23 711 SUPERFAMILY SSF53335 143 220 1.3E-37 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS16635 665439686af04be63352c27b9db21d23 711 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 308 314 - T 05-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AC028_RS16635 665439686af04be63352c27b9db21d23 711 SMART SM00981 55 153 2.4E-21 T 05-07-2017 IPR004114 THUMP domain GO:0003723 AC028_RS16635 665439686af04be63352c27b9db21d23 711 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 3 711 29.677 T 05-07-2017 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AC028_RS16635 665439686af04be63352c27b9db21d23 711 Gene3D G3DSA:3.40.50.150 259 375 9.9E-26 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS16635 665439686af04be63352c27b9db21d23 711 Gene3D G3DSA:3.40.50.150 144 217 9.9E-26 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS16635 665439686af04be63352c27b9db21d23 711 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 198 209 - T 05-07-2017 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AC028_RS16635 665439686af04be63352c27b9db21d23 711 Gene3D G3DSA:3.40.50.150 450 710 2.2E-67 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS16635 665439686af04be63352c27b9db21d23 711 PIRSF PIRSF037618 1 711 2.9E-283 T 05-07-2017 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AC028_RS16635 665439686af04be63352c27b9db21d23 711 SUPERFAMILY SSF53335 401 707 1.47E-58 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS16635 665439686af04be63352c27b9db21d23 711 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 485 663 3.7E-15 T 05-07-2017 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AC028_RS00935 82722f3932dbb67af8e0cc5fabbeb21d 949 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 162 9.4E-26 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS00935 82722f3932dbb67af8e0cc5fabbeb21d 949 Gene3D G3DSA:2.170.130.10 27 165 8.4E-36 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS00935 82722f3932dbb67af8e0cc5fabbeb21d 949 SUPERFAMILY SSF56935 39 220 4.03E-90 T 05-07-2017 AC028_RS00935 82722f3932dbb67af8e0cc5fabbeb21d 949 SUPERFAMILY SSF56935 751 949 4.03E-90 T 05-07-2017 AC028_RS00935 82722f3932dbb67af8e0cc5fabbeb21d 949 SUPERFAMILY SSF56935 303 343 4.03E-90 T 05-07-2017 AC028_RS00935 82722f3932dbb67af8e0cc5fabbeb21d 949 SUPERFAMILY SSF56935 675 720 4.03E-90 T 05-07-2017 AC028_RS00935 82722f3932dbb67af8e0cc5fabbeb21d 949 SUPERFAMILY SSF56935 374 429 4.03E-90 T 05-07-2017 AC028_RS00935 82722f3932dbb67af8e0cc5fabbeb21d 949 SUPERFAMILY SSF56935 483 628 4.03E-90 T 05-07-2017 AC028_RS00935 82722f3932dbb67af8e0cc5fabbeb21d 949 Pfam PF00593 TonB dependent receptor 599 946 2.5E-32 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS00935 82722f3932dbb67af8e0cc5fabbeb21d 949 Gene3D G3DSA:2.40.170.20 664 949 3.8E-87 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS00935 82722f3932dbb67af8e0cc5fabbeb21d 949 Gene3D G3DSA:2.40.170.20 259 260 3.8E-87 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS00935 82722f3932dbb67af8e0cc5fabbeb21d 949 Gene3D G3DSA:2.40.170.20 494 629 3.8E-87 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS00935 82722f3932dbb67af8e0cc5fabbeb21d 949 Gene3D G3DSA:2.40.170.20 304 445 3.8E-87 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS00935 82722f3932dbb67af8e0cc5fabbeb21d 949 Gene3D G3DSA:2.40.170.20 166 224 3.8E-87 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21995 1889241aaae1e2f63b59a35251edc7d2 190 Pfam PF02545 Maf-like protein 2 186 1.2E-51 T 05-07-2017 IPR003697 Maf-like protein GO:0005737 AC028_RS21995 1889241aaae1e2f63b59a35251edc7d2 190 Gene3D G3DSA:3.90.950.10 2 188 1.2E-62 T 05-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like AC028_RS21995 1889241aaae1e2f63b59a35251edc7d2 190 Hamap MF_00528 Septum formation protein Maf [maf]. 1 190 29.004 T 05-07-2017 IPR003697 Maf-like protein GO:0005737 AC028_RS21995 1889241aaae1e2f63b59a35251edc7d2 190 SUPERFAMILY SSF52972 1 185 2.81E-57 T 05-07-2017 IPR029001 Inosine triphosphate pyrophosphatase-like AC028_RS21995 1889241aaae1e2f63b59a35251edc7d2 190 PIRSF PIRSF006305 1 190 3.1E-47 T 05-07-2017 IPR003697 Maf-like protein GO:0005737 AC028_RS21995 1889241aaae1e2f63b59a35251edc7d2 190 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 184 6.6E-48 T 05-07-2017 IPR003697 Maf-like protein GO:0005737 AC028_RS18810 8886a92821a11871d9fffc34a1c004de 262 Gene3D G3DSA:1.25.40.10 47 254 1.4E-29 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS18810 8886a92821a11871d9fffc34a1c004de 262 Pfam PF13432 Tetratricopeptide repeat 51 113 8.4E-7 T 05-07-2017 AC028_RS18810 8886a92821a11871d9fffc34a1c004de 262 Pfam PF13432 Tetratricopeptide repeat 128 185 4.9E-4 T 05-07-2017 AC028_RS18810 8886a92821a11871d9fffc34a1c004de 262 SMART SM00028 81 114 78.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS18810 8886a92821a11871d9fffc34a1c004de 262 SMART SM00028 185 218 390.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS18810 8886a92821a11871d9fffc34a1c004de 262 SMART SM00028 47 80 51.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS18810 8886a92821a11871d9fffc34a1c004de 262 SMART SM00028 151 184 0.0019 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS18810 8886a92821a11871d9fffc34a1c004de 262 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 39 250 6.8E-52 T 05-07-2017 IPR013360 Pilus biogenesis/stability type IV, PilW AC028_RS18810 8886a92821a11871d9fffc34a1c004de 262 SUPERFAMILY SSF48452 64 253 5.5E-21 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS11690 2be04198d5cfce536bb997649791458f 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.4E-56 T 05-07-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AC028_RS11690 2be04198d5cfce536bb997649791458f 122 SUPERFAMILY SSF50193 1 122 2.49E-53 T 05-07-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AC028_RS11690 2be04198d5cfce536bb997649791458f 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 05-07-2017 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11690 2be04198d5cfce536bb997649791458f 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 28.009 T 05-07-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AC028_RS11690 2be04198d5cfce536bb997649791458f 122 Gene3D G3DSA:2.40.150.20 1 122 1.1E-56 T 05-07-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AC028_RS11690 2be04198d5cfce536bb997649791458f 122 SMART SM01374 1 122 2.2E-88 T 05-07-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AC028_RS11690 2be04198d5cfce536bb997649791458f 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.9E-59 T 05-07-2017 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AC028_RS00865 e68d11b8759dd323cc2caacdd196b76b 331 PRINTS PR00412 Epoxide hydrolase signature 71 89 9.0E-5 T 05-07-2017 IPR000639 Epoxide hydrolase-like GO:0003824 AC028_RS00865 e68d11b8759dd323cc2caacdd196b76b 331 PRINTS PR00412 Epoxide hydrolase signature 306 328 9.0E-5 T 05-07-2017 IPR000639 Epoxide hydrolase-like GO:0003824 AC028_RS00865 e68d11b8759dd323cc2caacdd196b76b 331 PRINTS PR00412 Epoxide hydrolase signature 91 106 9.0E-5 T 05-07-2017 IPR000639 Epoxide hydrolase-like GO:0003824 AC028_RS00865 e68d11b8759dd323cc2caacdd196b76b 331 PRINTS PR00412 Epoxide hydrolase signature 150 163 9.0E-5 T 05-07-2017 IPR000639 Epoxide hydrolase-like GO:0003824 AC028_RS00865 e68d11b8759dd323cc2caacdd196b76b 331 PRINTS PR00412 Epoxide hydrolase signature 136 149 9.0E-5 T 05-07-2017 IPR000639 Epoxide hydrolase-like GO:0003824 AC028_RS00865 e68d11b8759dd323cc2caacdd196b76b 331 PRINTS PR00111 Alpha/beta hydrolase fold signature 150 163 4.2E-11 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS00865 e68d11b8759dd323cc2caacdd196b76b 331 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 106 4.2E-11 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS00865 e68d11b8759dd323cc2caacdd196b76b 331 PRINTS PR00111 Alpha/beta hydrolase fold signature 136 149 4.2E-11 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS00865 e68d11b8759dd323cc2caacdd196b76b 331 SUPERFAMILY SSF53474 30 329 9.11E-60 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS00865 e68d11b8759dd323cc2caacdd196b76b 331 Pfam PF00561 alpha/beta hydrolase fold 68 180 3.3E-21 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS00865 e68d11b8759dd323cc2caacdd196b76b 331 Gene3D G3DSA:3.40.50.1820 28 327 2.2E-69 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS03055 4e3a9e18ff1b6d8618dcf1a49edd371b 140 Gene3D G3DSA:3.40.30.10 2 138 1.0E-51 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS03055 4e3a9e18ff1b6d8618dcf1a49edd371b 140 Pfam PF03960 ArsC family 7 113 1.3E-13 T 05-07-2017 IPR006660 Arsenate reductase-like AC028_RS03055 4e3a9e18ff1b6d8618dcf1a49edd371b 140 SUPERFAMILY SSF52833 4 133 8.47E-36 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS03055 4e3a9e18ff1b6d8618dcf1a49edd371b 140 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 115 5.9E-41 T 05-07-2017 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AC028_RS17235 516990f7f1fa21d4f3b17962b31b4900 499 ProSitePatterns PS00131 Serine carboxypeptidases, serine active site. 204 211 - T 05-07-2017 IPR018202 Serine carboxypeptidase, serine active site AC028_RS17235 516990f7f1fa21d4f3b17962b31b4900 499 Gene3D G3DSA:3.40.50.1820 47 463 2.6E-55 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS17235 516990f7f1fa21d4f3b17962b31b4900 499 Pfam PF00450 Serine carboxypeptidase 91 466 2.0E-18 T 05-07-2017 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 AC028_RS17235 516990f7f1fa21d4f3b17962b31b4900 499 SUPERFAMILY SSF53474 52 485 1.24E-71 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 SMART SM00448 1032 1147 2.4E-35 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 SMART SM00448 891 1007 3.8E-23 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 Pfam PF00072 Response regulator receiver domain 893 1007 1.5E-17 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 Pfam PF00072 Response regulator receiver domain 1035 1148 3.0E-26 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 Gene3D G3DSA:3.30.450.20 494 621 5.1E-20 T 05-07-2017 AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 SMART SM00387 755 872 1.3E-38 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 SUPERFAMILY SSF55785 505 631 9.77E-19 T 05-07-2017 IPR000014 PAS domain AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 SMART SM00086 421 463 11.0 T 05-07-2017 IPR001610 PAC motif AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 SMART SM00086 581 623 1.9E-6 T 05-07-2017 IPR001610 PAC motif AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 SUPERFAMILY SSF47226 1130 1143 1.15E-11 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 SUPERFAMILY SSF47226 1179 1270 1.15E-11 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 Gene3D G3DSA:3.40.50.2300 887 1015 9.8E-27 T 05-07-2017 AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 SUPERFAMILY SSF47384 629 709 3.14E-21 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 Gene3D G3DSA:3.30.450.20 342 461 2.7E-19 T 05-07-2017 AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 SUPERFAMILY SSF52172 1031 1153 6.83E-37 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 Gene3D G3DSA:1.20.120.160 1190 1285 8.5E-12 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 SMART SM00388 643 708 4.2E-23 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 797 811 2.0E-14 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 856 869 2.0E-14 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 815 825 2.0E-14 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 832 850 2.0E-14 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 SMART SM00091 493 560 4.2E-8 T 05-07-2017 IPR000014 PAS domain AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 SMART SM00091 350 416 1.5E-9 T 05-07-2017 IPR000014 PAS domain AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 SUPERFAMILY SSF52172 890 1015 8.54E-26 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 SUPERFAMILY SSF55874 697 868 2.62E-45 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 Gene3D G3DSA:3.40.50.2300 1030 1159 4.8E-41 T 05-07-2017 AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 SMART SM01079 83 271 2.8E-56 T 05-07-2017 IPR006189 CHASE domain AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 Gene3D G3DSA:3.30.565.10 695 871 1.8E-45 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 SUPERFAMILY SSF55785 342 461 3.77E-20 T 05-07-2017 IPR000014 PAS domain AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 755 871 3.0E-27 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 Pfam PF03924 CHASE domain 87 265 1.6E-39 T 05-07-2017 IPR006189 CHASE domain AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 Pfam PF00512 His Kinase A (phospho-acceptor) domain 643 708 1.2E-19 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 Pfam PF01627 Hpt domain 1199 1281 6.9E-8 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 Gene3D G3DSA:1.10.287.130 635 694 2.0E-16 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 352 469 2.4E-17 T 05-07-2017 IPR000014 PAS domain AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 496 630 3.3E-16 T 05-07-2017 IPR000014 PAS domain AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 Pfam PF13426 PAS domain 505 622 1.1E-12 T 05-07-2017 IPR000014 PAS domain AC028_RS20750 6c490d266d429f7abfac2d15aa6bd454 1364 Pfam PF13426 PAS domain 361 462 2.3E-12 T 05-07-2017 IPR000014 PAS domain AC028_RS21130 422762e55079f26190c42b69c115f192 540 SMART SM00091 28 97 4.5E-5 T 05-07-2017 IPR000014 PAS domain AC028_RS21130 422762e55079f26190c42b69c115f192 540 SUPERFAMILY SSF47384 151 227 3.14E-7 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS21130 422762e55079f26190c42b69c115f192 540 SUPERFAMILY SSF52172 415 534 2.13E-27 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS21130 422762e55079f26190c42b69c115f192 540 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 278 394 5.2E-18 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS21130 422762e55079f26190c42b69c115f192 540 SMART SM00388 160 230 3.5E-4 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS21130 422762e55079f26190c42b69c115f192 540 Pfam PF00072 Response regulator receiver domain 418 530 1.7E-17 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS21130 422762e55079f26190c42b69c115f192 540 SMART SM00086 103 145 2.5E-8 T 05-07-2017 IPR001610 PAC motif AC028_RS21130 422762e55079f26190c42b69c115f192 540 Gene3D G3DSA:3.30.450.20 41 145 1.4E-34 T 05-07-2017 AC028_RS21130 422762e55079f26190c42b69c115f192 540 SUPERFAMILY SSF55785 35 145 1.57E-27 T 05-07-2017 IPR000014 PAS domain AC028_RS21130 422762e55079f26190c42b69c115f192 540 Gene3D G3DSA:3.30.565.10 207 396 1.7E-32 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS21130 422762e55079f26190c42b69c115f192 540 Gene3D G3DSA:3.40.50.2300 414 534 6.8E-33 T 05-07-2017 AC028_RS21130 422762e55079f26190c42b69c115f192 540 SMART SM00387 271 396 2.5E-23 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS21130 422762e55079f26190c42b69c115f192 540 Pfam PF13426 PAS domain 49 143 5.8E-21 T 05-07-2017 IPR000014 PAS domain AC028_RS21130 422762e55079f26190c42b69c115f192 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 339 5.4E-16 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS21130 422762e55079f26190c42b69c115f192 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 393 5.4E-16 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS21130 422762e55079f26190c42b69c115f192 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 374 5.4E-16 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS21130 422762e55079f26190c42b69c115f192 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 353 5.4E-16 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS21130 422762e55079f26190c42b69c115f192 540 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 26 152 2.0E-17 T 05-07-2017 IPR000014 PAS domain AC028_RS21130 422762e55079f26190c42b69c115f192 540 SUPERFAMILY SSF55874 220 394 2.75E-34 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS21130 422762e55079f26190c42b69c115f192 540 SMART SM00448 416 529 1.0E-20 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS10660 87dd6b638ace19534919642821fbf8c4 412 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 328 3.0E-130 T 05-07-2017 IPR000158 Cell division protein FtsZ GO:0005525 AC028_RS10660 87dd6b638ace19534919642821fbf8c4 412 ProSitePatterns PS01135 FtsZ protein signature 2. 99 120 - T 05-07-2017 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AC028_RS10660 87dd6b638ace19534919642821fbf8c4 412 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 11 349 37.688 T 05-07-2017 IPR000158 Cell division protein FtsZ GO:0005525 AC028_RS10660 87dd6b638ace19534919642821fbf8c4 412 SUPERFAMILY SSF52490 15 210 1.57E-69 T 05-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AC028_RS10660 87dd6b638ace19534919642821fbf8c4 412 Gene3D G3DSA:3.40.50.1440 16 216 1.5E-91 T 05-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AC028_RS10660 87dd6b638ace19534919642821fbf8c4 412 Pfam PF12327 FtsZ family, C-terminal domain 224 318 4.9E-38 T 05-07-2017 IPR024757 Cell division protein FtsZ, C-terminal AC028_RS10660 87dd6b638ace19534919642821fbf8c4 412 Gene3D G3DSA:3.30.1330.20 217 321 1.3E-46 T 05-07-2017 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 AC028_RS10660 87dd6b638ace19534919642821fbf8c4 412 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 174 3.0E-40 T 05-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AC028_RS10660 87dd6b638ace19534919642821fbf8c4 412 PRINTS PR00423 Cell division protein FtsZ signature 191 213 3.9E-52 T 05-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AC028_RS10660 87dd6b638ace19534919642821fbf8c4 412 PRINTS PR00423 Cell division protein FtsZ signature 128 149 3.9E-52 T 05-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AC028_RS10660 87dd6b638ace19534919642821fbf8c4 412 PRINTS PR00423 Cell division protein FtsZ signature 214 235 3.9E-52 T 05-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AC028_RS10660 87dd6b638ace19534919642821fbf8c4 412 PRINTS PR00423 Cell division protein FtsZ signature 100 120 3.9E-52 T 05-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AC028_RS10660 87dd6b638ace19534919642821fbf8c4 412 SMART SM00864 15 207 5.5E-112 T 05-07-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AC028_RS10660 87dd6b638ace19534919642821fbf8c4 412 SUPERFAMILY SSF55307 206 321 7.78E-43 T 05-07-2017 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 AC028_RS10660 87dd6b638ace19534919642821fbf8c4 412 SMART SM00865 209 327 6.2E-57 T 05-07-2017 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 AC028_RS13445 0a75be95df27646176423f40027078aa 293 Pfam PF05036 Sporulation related domain 217 291 9.2E-15 T 05-07-2017 IPR007730 Sporulation-related domain GO:0042834 AC028_RS13445 0a75be95df27646176423f40027078aa 293 Gene3D G3DSA:3.30.70.1070 214 292 3.1E-20 T 05-07-2017 IPR007730 Sporulation-related domain GO:0042834 AC028_RS13445 0a75be95df27646176423f40027078aa 293 SUPERFAMILY SSF110997 216 291 2.09E-15 T 05-07-2017 IPR007730 Sporulation-related domain GO:0042834 AC028_RS15035 93048f46e6e3e53327aaaba4e420627a 873 Gene3D G3DSA:2.40.170.20 284 873 4.5E-100 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS15035 93048f46e6e3e53327aaaba4e420627a 873 Gene3D G3DSA:2.40.170.20 167 229 4.5E-100 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS15035 93048f46e6e3e53327aaaba4e420627a 873 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 163 1.4E-23 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS15035 93048f46e6e3e53327aaaba4e420627a 873 Gene3D G3DSA:2.170.130.10 45 166 9.1E-35 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS15035 93048f46e6e3e53327aaaba4e420627a 873 Pfam PF00593 TonB dependent receptor 570 872 2.5E-34 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS15035 93048f46e6e3e53327aaaba4e420627a 873 SUPERFAMILY SSF56935 389 873 2.43E-105 T 05-07-2017 AC028_RS15035 93048f46e6e3e53327aaaba4e420627a 873 SUPERFAMILY SSF56935 302 350 2.43E-105 T 05-07-2017 AC028_RS15035 93048f46e6e3e53327aaaba4e420627a 873 SUPERFAMILY SSF56935 32 231 2.43E-105 T 05-07-2017 AC028_RS11750 c759d599f352a8a0b95cc293eab5dabd 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 05-07-2017 IPR018102 Ribosomal S11, conserved site AC028_RS11750 c759d599f352a8a0b95cc293eab5dabd 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 32.632 T 05-07-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AC028_RS11750 c759d599f352a8a0b95cc293eab5dabd 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 3.0E-54 T 05-07-2017 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11750 c759d599f352a8a0b95cc293eab5dabd 130 SUPERFAMILY SSF53137 17 130 6.02E-46 T 05-07-2017 AC028_RS11750 c759d599f352a8a0b95cc293eab5dabd 130 PIRSF PIRSF002131 1 130 1.6E-52 T 05-07-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AC028_RS11750 c759d599f352a8a0b95cc293eab5dabd 130 Gene3D G3DSA:3.30.420.80 7 130 1.7E-52 T 05-07-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AC028_RS11750 c759d599f352a8a0b95cc293eab5dabd 130 Pfam PF00411 Ribosomal protein S11 20 129 5.1E-50 T 05-07-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AC028_RS07365 34bf92e43e831be36ba5cd008a765664 720 Pfam PF05746 DALR anticodon binding domain 612 707 9.8E-7 T 05-07-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AC028_RS07365 34bf92e43e831be36ba5cd008a765664 720 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 4 718 24.428 T 05-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AC028_RS07365 34bf92e43e831be36ba5cd008a765664 720 Gene3D G3DSA:1.10.730.10 612 707 2.8E-5 T 05-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS07365 34bf92e43e831be36ba5cd008a765664 720 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 580 4.4E-188 T 05-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AC028_RS07365 34bf92e43e831be36ba5cd008a765664 720 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 248 263 1.7E-29 T 05-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AC028_RS07365 34bf92e43e831be36ba5cd008a765664 720 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 53 65 1.7E-29 T 05-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AC028_RS07365 34bf92e43e831be36ba5cd008a765664 720 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 320 336 1.7E-29 T 05-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AC028_RS07365 34bf92e43e831be36ba5cd008a765664 720 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 8 21 1.7E-29 T 05-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AC028_RS07365 34bf92e43e831be36ba5cd008a765664 720 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 396 415 1.7E-29 T 05-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AC028_RS07365 34bf92e43e831be36ba5cd008a765664 720 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 7 718 2.3E-200 T 05-07-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AC028_RS07365 34bf92e43e831be36ba5cd008a765664 720 SMART SM00836 615 718 0.0052 T 05-07-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AC028_RS07365 34bf92e43e831be36ba5cd008a765664 720 SUPERFAMILY SSF109604 351 488 1.47E-14 T 05-07-2017 AC028_RS00140 78b90d9dba6ee5726f4b56a153755a39 316 SUPERFAMILY SSF56176 1 220 7.63E-58 T 05-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AC028_RS00140 78b90d9dba6ee5726f4b56a153755a39 316 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 227 274 1.0E-6 T 05-07-2017 IPR005107 CO dehydrogenase flavoprotein, C-terminal AC028_RS00140 78b90d9dba6ee5726f4b56a153755a39 316 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 221 1.2E-50 T 05-07-2017 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 AC028_RS00140 78b90d9dba6ee5726f4b56a153755a39 316 Gene3D G3DSA:3.30.465.10 57 113 9.0E-31 T 05-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AC028_RS00140 78b90d9dba6ee5726f4b56a153755a39 316 Gene3D G3DSA:3.30.465.10 157 220 9.0E-31 T 05-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AC028_RS00140 78b90d9dba6ee5726f4b56a153755a39 316 Gene3D G3DSA:3.30.43.10 1 51 3.6E-21 T 05-07-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AC028_RS00140 78b90d9dba6ee5726f4b56a153755a39 316 Gene3D G3DSA:3.30.390.50 224 313 2.2E-23 T 05-07-2017 AC028_RS00140 78b90d9dba6ee5726f4b56a153755a39 316 SUPERFAMILY SSF55447 224 313 3.01E-20 T 05-07-2017 IPR005107 CO dehydrogenase flavoprotein, C-terminal AC028_RS00140 78b90d9dba6ee5726f4b56a153755a39 316 SMART SM01092 226 314 2.7E-19 T 05-07-2017 IPR005107 CO dehydrogenase flavoprotein, C-terminal AC028_RS09960 44b81a14384f85ded8ce38b975c98f90 591 Gene3D G3DSA:1.25.40.20 297 586 4.7E-58 T 05-07-2017 IPR020683 Ankyrin repeat-containing domain AC028_RS09960 44b81a14384f85ded8ce38b975c98f90 591 Gene3D G3DSA:3.40.190.10 87 168 3.2E-5 T 05-07-2017 AC028_RS09960 44b81a14384f85ded8ce38b975c98f90 591 Gene3D G3DSA:3.40.190.10 276 296 3.2E-5 T 05-07-2017 AC028_RS09960 44b81a14384f85ded8ce38b975c98f90 591 SMART SM00248 397 426 0.28 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS09960 44b81a14384f85ded8ce38b975c98f90 591 SMART SM00248 496 525 61.0 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS09960 44b81a14384f85ded8ce38b975c98f90 591 SMART SM00248 529 558 0.074 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS09960 44b81a14384f85ded8ce38b975c98f90 591 SMART SM00248 463 492 0.0011 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS09960 44b81a14384f85ded8ce38b975c98f90 591 SMART SM00248 430 459 3.0 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS09960 44b81a14384f85ded8ce38b975c98f90 591 TIGRFAM TIGR03871 ABC_peri_MoxJ_2: quinoprotein dehydrogenase-associated probable ABC transporter substrate-binding protein 88 316 7.3E-79 T 05-07-2017 IPR022448 Quinoprotein dehydrogenase-associated AC028_RS09960 44b81a14384f85ded8ce38b975c98f90 591 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 90 311 3.6E-12 T 05-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AC028_RS09960 44b81a14384f85ded8ce38b975c98f90 591 SUPERFAMILY SSF48403 351 584 2.49E-51 T 05-07-2017 IPR020683 Ankyrin repeat-containing domain AC028_RS09960 44b81a14384f85ded8ce38b975c98f90 591 SUPERFAMILY SSF53850 84 310 2.48E-23 T 05-07-2017 AC028_RS09960 44b81a14384f85ded8ce38b975c98f90 591 Pfam PF13857 Ankyrin repeats (many copies) 417 471 2.3E-8 T 05-07-2017 AC028_RS09960 44b81a14384f85ded8ce38b975c98f90 591 SMART SM00062 87 311 4.1E-16 T 05-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AC028_RS09960 44b81a14384f85ded8ce38b975c98f90 591 Pfam PF12796 Ankyrin repeats (3 copies) 479 559 2.0E-8 T 05-07-2017 IPR020683 Ankyrin repeat-containing domain AC028_RS10540 ee88e12d81b3b37b1007ca59f437181d 886 Pfam PF00582 Universal stress protein family 249 361 6.4E-6 T 05-07-2017 IPR006016 UspA GO:0006950 AC028_RS10540 ee88e12d81b3b37b1007ca59f437181d 886 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 769 874 1.7E-17 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS10540 ee88e12d81b3b37b1007ca59f437181d 886 SUPERFAMILY SSF55874 710 877 1.96E-37 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS10540 ee88e12d81b3b37b1007ca59f437181d 886 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 229 3.8E-94 T 05-07-2017 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 AC028_RS10540 ee88e12d81b3b37b1007ca59f437181d 886 SUPERFAMILY SSF52540 15 223 1.03E-6 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10540 ee88e12d81b3b37b1007ca59f437181d 886 Pfam PF00512 His Kinase A (phospho-acceptor) domain 653 719 1.1E-11 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS10540 ee88e12d81b3b37b1007ca59f437181d 886 Gene3D G3DSA:1.10.287.130 648 716 4.1E-16 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS10540 ee88e12d81b3b37b1007ca59f437181d 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 801 815 3.2E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS10540 ee88e12d81b3b37b1007ca59f437181d 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 819 829 3.2E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS10540 ee88e12d81b3b37b1007ca59f437181d 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 860 873 3.2E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS10540 ee88e12d81b3b37b1007ca59f437181d 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 835 853 3.2E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS10540 ee88e12d81b3b37b1007ca59f437181d 886 SMART SM00388 652 720 6.7E-15 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS10540 ee88e12d81b3b37b1007ca59f437181d 886 SUPERFAMILY SSF52402 250 362 4.6E-12 T 05-07-2017 AC028_RS10540 ee88e12d81b3b37b1007ca59f437181d 886 Gene3D G3DSA:3.40.50.300 19 228 1.1E-96 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10540 ee88e12d81b3b37b1007ca59f437181d 886 Pfam PF13493 Domain of unknown function (DUF4118) 397 498 9.3E-23 T 05-07-2017 IPR025201 Sensor protein KdpD, transmembrane domain AC028_RS10540 ee88e12d81b3b37b1007ca59f437181d 886 Gene3D G3DSA:1.20.120.620 392 496 9.1E-30 T 05-07-2017 AC028_RS10540 ee88e12d81b3b37b1007ca59f437181d 886 Gene3D G3DSA:3.30.565.10 722 878 3.9E-35 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS10540 ee88e12d81b3b37b1007ca59f437181d 886 SUPERFAMILY SSF47384 648 719 9.02E-14 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS10540 ee88e12d81b3b37b1007ca59f437181d 886 SMART SM00387 764 876 8.9E-31 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS10540 ee88e12d81b3b37b1007ca59f437181d 886 Gene3D G3DSA:3.40.50.620 248 362 1.5E-12 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS16340 48e76114244e2ed978140316c29a6f03 291 Pfam PF00005 ABC transporter 25 162 8.3E-20 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS16340 48e76114244e2ed978140316c29a6f03 291 SUPERFAMILY SSF52540 9 225 2.57E-42 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS16340 48e76114244e2ed978140316c29a6f03 291 Gene3D G3DSA:3.40.50.300 4 227 8.9E-45 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS16340 48e76114244e2ed978140316c29a6f03 291 SMART SM00382 34 212 6.4E-13 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS08300 8fc233bcc773c7ea976839461a865ff3 110 SUPERFAMILY SSF69593 1 102 3.27E-19 T 05-07-2017 AC028_RS08300 8fc233bcc773c7ea976839461a865ff3 110 Pfam PF01553 Acyltransferase 8 52 1.3E-7 T 05-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AC028_RS08300 8fc233bcc773c7ea976839461a865ff3 110 Gene3D G3DSA:3.40.1130.10 7 85 4.2E-7 T 05-07-2017 AC028_RS03570 e5f69bafc5189429a0cdeeac254d6355 816 SUPERFAMILY SSF52540 398 738 1.61E-47 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS03570 e5f69bafc5189429a0cdeeac254d6355 816 Gene3D G3DSA:3.40.50.300 405 589 5.2E-20 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS03570 e5f69bafc5189429a0cdeeac254d6355 816 Gene3D G3DSA:3.40.50.300 633 718 5.2E-20 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS03570 e5f69bafc5189429a0cdeeac254d6355 816 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 183 388 1.4E-13 T 05-07-2017 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 AC028_RS03570 e5f69bafc5189429a0cdeeac254d6355 816 SMART SM00382 440 704 7.8E-10 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS04500 c515e4d8dd77c0296678df61f4fc3cda 330 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 245 257 - T 05-07-2017 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS04500 c515e4d8dd77c0296678df61f4fc3cda 330 Gene3D G3DSA:3.20.20.70 2 328 4.9E-150 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS04500 c515e4d8dd77c0296678df61f4fc3cda 330 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 325 1.4E-139 T 05-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS04500 c515e4d8dd77c0296678df61f4fc3cda 330 PIRSF PIRSF001415 1 329 1.5E-149 T 05-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS04500 c515e4d8dd77c0296678df61f4fc3cda 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 245 261 9.1E-57 T 05-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS04500 c515e4d8dd77c0296678df61f4fc3cda 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 191 210 9.1E-57 T 05-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS04500 c515e4d8dd77c0296678df61f4fc3cda 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 122 136 9.1E-57 T 05-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS04500 c515e4d8dd77c0296678df61f4fc3cda 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 153 172 9.1E-57 T 05-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS04500 c515e4d8dd77c0296678df61f4fc3cda 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 300 319 9.1E-57 T 05-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS04500 c515e4d8dd77c0296678df61f4fc3cda 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 270 285 9.1E-57 T 05-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS04500 c515e4d8dd77c0296678df61f4fc3cda 330 SUPERFAMILY SSF51569 2 328 3.08E-142 T 05-07-2017 AC028_RS04500 c515e4d8dd77c0296678df61f4fc3cda 330 SMART SM01004 3 326 1.1E-239 T 05-07-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS05615 be2458873b3dd2e6374bc2e53cc4d1b0 311 SUPERFAMILY SSF56235 2 305 3.86E-95 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS05615 be2458873b3dd2e6374bc2e53cc4d1b0 311 Pfam PF01112 Asparaginase 1 305 1.9E-119 T 05-07-2017 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 AC028_RS02750 379b5cad4196ddfb7c3608fa72c9b7ca 219 Gene3D G3DSA:1.10.510.10 97 150 1.2E-8 T 05-07-2017 AC028_RS02750 379b5cad4196ddfb7c3608fa72c9b7ca 219 SUPERFAMILY SSF56112 28 148 3.32E-15 T 05-07-2017 IPR011009 Protein kinase-like domain AC028_RS00330 87f092f4d379945bc129aaa86e9944de 414 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 225 244 - T 05-07-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AC028_RS00330 87f092f4d379945bc129aaa86e9944de 414 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 16 413 1.4E-172 T 05-07-2017 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AC028_RS00330 87f092f4d379945bc129aaa86e9944de 414 Gene3D G3DSA:3.40.640.10 46 292 6.7E-85 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS00330 87f092f4d379945bc129aaa86e9944de 414 Pfam PF00266 Aminotransferase class-V 34 402 6.4E-144 T 05-07-2017 IPR000192 Aminotransferase class V domain AC028_RS00330 87f092f4d379945bc129aaa86e9944de 414 PIRSF PIRSF005572 31 412 1.7E-48 T 05-07-2017 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AC028_RS00330 87f092f4d379945bc129aaa86e9944de 414 SUPERFAMILY SSF53383 13 411 7.23E-124 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS00330 87f092f4d379945bc129aaa86e9944de 414 Gene3D G3DSA:3.90.1150.10 293 407 1.6E-29 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS13600 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 165 183 4.3E-124 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13600 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 93 117 4.3E-124 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13600 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 194 213 4.3E-124 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13600 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 19 44 4.3E-124 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13600 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 136 148 4.3E-124 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13600 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 66 89 4.3E-124 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13600 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 315 336 4.3E-124 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13600 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 428 449 4.3E-124 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13600 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 350 368 4.3E-124 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13600 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 245 266 4.3E-124 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13600 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 378 397 4.3E-124 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13600 8a225dbf094fb90045f0d9abe8195c51 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 291 306 4.3E-124 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13600 8a225dbf094fb90045f0d9abe8195c51 534 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 247 301 - T 05-07-2017 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13600 8a225dbf094fb90045f0d9abe8195c51 534 Gene3D G3DSA:1.20.210.10 8 524 2.5E-218 T 05-07-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13600 8a225dbf094fb90045f0d9abe8195c51 534 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 20 521 5.3E-208 T 05-07-2017 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AC028_RS13600 8a225dbf094fb90045f0d9abe8195c51 534 SUPERFAMILY SSF81442 17 522 7.59E-189 T 05-07-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13600 8a225dbf094fb90045f0d9abe8195c51 534 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 28 469 2.4E-149 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13105 d54a90ad2740a42af26794b8226f9c87 280 Pfam PF01740 STAS domain 165 251 6.3E-8 T 05-07-2017 IPR002645 STAS domain AC028_RS13105 d54a90ad2740a42af26794b8226f9c87 280 SUPERFAMILY SSF52091 158 268 1.47E-17 T 05-07-2017 IPR002645 STAS domain AC028_RS13105 d54a90ad2740a42af26794b8226f9c87 280 Pfam PF14361 RsbT co-antagonist protein rsbRD N-terminal domain 12 105 3.4E-21 T 05-07-2017 IPR025751 RsbT co-antagonist protein RsbRD, N-terminal domain AC028_RS13105 d54a90ad2740a42af26794b8226f9c87 280 Gene3D G3DSA:3.30.750.24 159 251 6.0E-14 T 05-07-2017 IPR002645 STAS domain AC028_RS21120 78969ee37bd0f17277e005b29a5569d2 357 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 202 218 - T 05-07-2017 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AC028_RS21120 78969ee37bd0f17277e005b29a5569d2 357 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 43 173 1.0E-16 T 05-07-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AC028_RS21120 78969ee37bd0f17277e005b29a5569d2 357 Pfam PF14815 NUDIX domain 245 356 4.2E-22 T 05-07-2017 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AC028_RS21120 78969ee37bd0f17277e005b29a5569d2 357 Gene3D G3DSA:3.90.79.10 240 357 1.2E-23 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS21120 78969ee37bd0f17277e005b29a5569d2 357 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 13 284 1.3E-98 T 05-07-2017 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 AC028_RS21120 78969ee37bd0f17277e005b29a5569d2 357 ProSitePatterns PS01155 Endonuclease III family signature. 109 138 - T 05-07-2017 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AC028_RS21120 78969ee37bd0f17277e005b29a5569d2 357 SMART SM00478 46 200 2.5E-36 T 05-07-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AC028_RS21120 78969ee37bd0f17277e005b29a5569d2 357 Pfam PF00633 Helix-hairpin-helix motif 107 134 2.1E-7 T 05-07-2017 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AC028_RS21120 78969ee37bd0f17277e005b29a5569d2 357 SUPERFAMILY SSF55811 230 357 3.41E-26 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS21120 78969ee37bd0f17277e005b29a5569d2 357 Gene3D G3DSA:1.10.340.30 28 129 1.4E-42 T 05-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AC028_RS21120 78969ee37bd0f17277e005b29a5569d2 357 Gene3D G3DSA:1.10.1670.10 130 233 1.5E-33 T 05-07-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AC028_RS21120 78969ee37bd0f17277e005b29a5569d2 357 SUPERFAMILY SSF48150 11 234 1.44E-69 T 05-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AC028_RS11360 7fe79bac72b785851e3c3ef7168fee26 285 Gene3D G3DSA:3.40.50.1820 57 282 4.2E-30 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS11360 7fe79bac72b785851e3c3ef7168fee26 285 Pfam PF12146 Serine aminopeptidase, S33 80 212 8.7E-12 T 05-07-2017 IPR022742 Serine aminopeptidase, S33 AC028_RS11360 7fe79bac72b785851e3c3ef7168fee26 285 SUPERFAMILY SSF53474 54 275 6.43E-32 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS18560 b1fcd91182c4890b118ac591b5905dd9 467 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 7 49 1.6E-12 T 05-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AC028_RS18560 b1fcd91182c4890b118ac591b5905dd9 467 PIRSF PIRSF000774 1 459 1.9E-113 T 05-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AC028_RS18560 b1fcd91182c4890b118ac591b5905dd9 467 Pfam PF04963 Sigma-54 factor, core binding domain 112 288 6.3E-31 T 05-07-2017 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 AC028_RS18560 b1fcd91182c4890b118ac591b5905dd9 467 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 437 444 - T 05-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AC028_RS18560 b1fcd91182c4890b118ac591b5905dd9 467 Pfam PF04552 Sigma-54, DNA binding domain 304 457 1.9E-57 T 05-07-2017 IPR007634 RNA polymerase sigma factor 54, DNA-binding AC028_RS18560 b1fcd91182c4890b118ac591b5905dd9 467 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 456 9.9E-109 T 05-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AC028_RS18560 b1fcd91182c4890b118ac591b5905dd9 467 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 349 368 - T 05-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AC028_RS18560 b1fcd91182c4890b118ac591b5905dd9 467 PRINTS PR00045 Sigma-54 factor signature 361 373 3.4E-27 T 05-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AC028_RS18560 b1fcd91182c4890b118ac591b5905dd9 467 PRINTS PR00045 Sigma-54 factor signature 432 450 3.4E-27 T 05-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AC028_RS18560 b1fcd91182c4890b118ac591b5905dd9 467 PRINTS PR00045 Sigma-54 factor signature 377 388 3.4E-27 T 05-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AC028_RS18560 b1fcd91182c4890b118ac591b5905dd9 467 PRINTS PR00045 Sigma-54 factor signature 173 190 3.4E-27 T 05-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AC028_RS10735 63dd94377ea7e3af526b06968d3bfd8b 475 SMART SM00642 36 384 4.3E-27 T 05-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AC028_RS10735 63dd94377ea7e3af526b06968d3bfd8b 475 Gene3D G3DSA:3.20.20.80 31 366 1.0E-69 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS10735 63dd94377ea7e3af526b06968d3bfd8b 475 Pfam PF00128 Alpha amylase, catalytic domain 60 238 3.8E-10 T 05-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AC028_RS10735 63dd94377ea7e3af526b06968d3bfd8b 475 PRINTS PR00110 Alpha-amylase signature 110 121 2.9E-15 T 05-07-2017 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AC028_RS10735 63dd94377ea7e3af526b06968d3bfd8b 475 PRINTS PR00110 Alpha-amylase signature 318 330 2.9E-15 T 05-07-2017 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AC028_RS10735 63dd94377ea7e3af526b06968d3bfd8b 475 PRINTS PR00110 Alpha-amylase signature 223 234 2.9E-15 T 05-07-2017 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AC028_RS10735 63dd94377ea7e3af526b06968d3bfd8b 475 PRINTS PR00110 Alpha-amylase signature 252 270 2.9E-15 T 05-07-2017 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AC028_RS10735 63dd94377ea7e3af526b06968d3bfd8b 475 PRINTS PR00110 Alpha-amylase signature 77 94 2.9E-15 T 05-07-2017 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 AC028_RS10735 63dd94377ea7e3af526b06968d3bfd8b 475 SUPERFAMILY SSF51011 395 473 2.09E-6 T 05-07-2017 AC028_RS10735 63dd94377ea7e3af526b06968d3bfd8b 475 SUPERFAMILY SSF51445 31 392 3.47E-60 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS00975 0c8ba3a387f2e1e488be01053f36f3f6 131 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 130 1.4E-49 T 05-07-2017 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AC028_RS00975 0c8ba3a387f2e1e488be01053f36f3f6 131 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 30.839 T 05-07-2017 IPR002930 Glycine cleavage system H-protein AC028_RS00975 0c8ba3a387f2e1e488be01053f36f3f6 131 SUPERFAMILY SSF51230 4 128 9.42E-45 T 05-07-2017 IPR011053 Single hybrid motif AC028_RS00975 0c8ba3a387f2e1e488be01053f36f3f6 131 Pfam PF01597 Glycine cleavage H-protein 8 128 1.7E-44 T 05-07-2017 IPR002930 Glycine cleavage system H-protein AC028_RS00975 0c8ba3a387f2e1e488be01053f36f3f6 131 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 05-07-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AC028_RS00975 0c8ba3a387f2e1e488be01053f36f3f6 131 Gene3D G3DSA:2.40.50.100 7 128 1.3E-48 T 05-07-2017 AC028_RS18835 b50798dc8a9031faddbf38554373be82 406 Gene3D G3DSA:3.40.980.10 165 331 1.5E-60 T 05-07-2017 IPR001453 MoaB/Mog domain AC028_RS18835 b50798dc8a9031faddbf38554373be82 406 SMART SM00852 183 320 3.5E-39 T 05-07-2017 IPR001453 MoaB/Mog domain AC028_RS18835 b50798dc8a9031faddbf38554373be82 406 Gene3D G3DSA:3.90.105.10 134 164 1.8E-18 T 05-07-2017 AC028_RS18835 b50798dc8a9031faddbf38554373be82 406 SUPERFAMILY SSF63867 327 404 2.88E-19 T 05-07-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 AC028_RS18835 b50798dc8a9031faddbf38554373be82 406 Pfam PF03454 MoeA C-terminal region (domain IV) 333 403 8.6E-16 T 05-07-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 AC028_RS18835 b50798dc8a9031faddbf38554373be82 406 Pfam PF00994 Probable molybdopterin binding domain 183 318 4.6E-27 T 05-07-2017 IPR001453 MoaB/Mog domain AC028_RS18835 b50798dc8a9031faddbf38554373be82 406 SUPERFAMILY SSF63882 4 179 1.7E-48 T 05-07-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 AC028_RS18835 b50798dc8a9031faddbf38554373be82 406 Gene3D G3DSA:2.40.340.10 332 401 8.0E-21 T 05-07-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 AC028_RS18835 b50798dc8a9031faddbf38554373be82 406 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 170 4.3E-33 T 05-07-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 AC028_RS18835 b50798dc8a9031faddbf38554373be82 406 SUPERFAMILY SSF53218 180 324 2.36E-41 T 05-07-2017 IPR001453 MoaB/Mog domain AC028_RS18835 b50798dc8a9031faddbf38554373be82 406 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 310 4.5E-31 T 05-07-2017 IPR001453 MoaB/Mog domain AC028_RS18835 b50798dc8a9031faddbf38554373be82 406 Gene3D G3DSA:2.170.190.11 52 133 2.9E-27 T 05-07-2017 AC028_RS20270 ecc462db483f98907c5f5b30302f15a4 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.616 T 05-07-2017 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AC028_RS20270 ecc462db483f98907c5f5b30302f15a4 188 SUPERFAMILY SSF50249 69 128 1.46E-15 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS20270 ecc462db483f98907c5f5b30302f15a4 188 SUPERFAMILY SSF50249 130 187 4.11E-18 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS20270 ecc462db483f98907c5f5b30302f15a4 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 3.7E-73 T 05-07-2017 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AC028_RS20270 ecc462db483f98907c5f5b30302f15a4 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 8.9E-20 T 05-07-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AC028_RS20270 ecc462db483f98907c5f5b30302f15a4 188 Gene3D G3DSA:2.40.50.140 130 187 3.4E-28 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS20270 ecc462db483f98907c5f5b30302f15a4 188 Gene3D G3DSA:2.40.50.140 66 129 1.4E-23 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS20270 ecc462db483f98907c5f5b30302f15a4 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.6E-25 T 05-07-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AC028_RS20270 ecc462db483f98907c5f5b30302f15a4 188 SUPERFAMILY SSF50104 5 65 4.33E-17 T 05-07-2017 IPR008991 Translation protein SH3-like domain AC028_RS20270 ecc462db483f98907c5f5b30302f15a4 188 Gene3D G3DSA:2.30.30.30 6 65 4.9E-23 T 05-07-2017 IPR014722 Ribosomal protein L2 domain 2 AC028_RS20270 ecc462db483f98907c5f5b30302f15a4 188 SMART SM01185 69 123 1.2E-19 T 05-07-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AC028_RS20270 ecc462db483f98907c5f5b30302f15a4 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 6 62 6.1E-21 T 05-07-2017 IPR013185 Translation elongation factor, KOW-like AC028_RS20270 ecc462db483f98907c5f5b30302f15a4 188 PIRSF PIRSF005901 2 188 8.7E-63 T 05-07-2017 IPR020599 Translation elongation factor P/YeiP AC028_RS20270 ecc462db483f98907c5f5b30302f15a4 188 SMART SM00841 131 186 4.5E-32 T 05-07-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AC028_RS20270 ecc462db483f98907c5f5b30302f15a4 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 05-07-2017 IPR013852 Translation elongation factor P/YeiP, conserved site AC028_RS08395 1d3a5a843961f4eb2ac9c91943092571 95 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 8.1E-32 T 05-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AC028_RS08395 1d3a5a843961f4eb2ac9c91943092571 95 SMART SM00883 2 94 1.7E-51 T 05-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AC028_RS08395 1d3a5a843961f4eb2ac9c91943092571 95 SUPERFAMILY SSF50129 1 94 4.36E-31 T 05-07-2017 IPR011032 GroES-like AC028_RS08395 1d3a5a843961f4eb2ac9c91943092571 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 05-07-2017 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AC028_RS08395 1d3a5a843961f4eb2ac9c91943092571 95 Gene3D G3DSA:2.30.33.40 2 94 3.5E-33 T 05-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AC028_RS08395 1d3a5a843961f4eb2ac9c91943092571 95 PRINTS PR00297 10kDa chaperonin signature 3 18 3.6E-32 T 05-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AC028_RS08395 1d3a5a843961f4eb2ac9c91943092571 95 PRINTS PR00297 10kDa chaperonin signature 60 72 3.6E-32 T 05-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AC028_RS08395 1d3a5a843961f4eb2ac9c91943092571 95 PRINTS PR00297 10kDa chaperonin signature 81 94 3.6E-32 T 05-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AC028_RS08395 1d3a5a843961f4eb2ac9c91943092571 95 PRINTS PR00297 10kDa chaperonin signature 25 46 3.6E-32 T 05-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AC028_RS08395 1d3a5a843961f4eb2ac9c91943092571 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 25.406 T 05-07-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AC028_RS10875 875a07c178ddc505889cfd3926f040a1 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 164 183 1.8E-12 T 05-07-2017 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 AC028_RS10875 875a07c178ddc505889cfd3926f040a1 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 236 248 1.8E-12 T 05-07-2017 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 AC028_RS10875 875a07c178ddc505889cfd3926f040a1 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 113 123 1.8E-12 T 05-07-2017 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 AC028_RS10875 875a07c178ddc505889cfd3926f040a1 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 208 214 1.8E-12 T 05-07-2017 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 AC028_RS10875 875a07c178ddc505889cfd3926f040a1 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 275 288 1.8E-12 T 05-07-2017 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 AC028_RS10875 875a07c178ddc505889cfd3926f040a1 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 262 274 1.8E-12 T 05-07-2017 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 AC028_RS10875 875a07c178ddc505889cfd3926f040a1 322 Gene3D G3DSA:3.20.20.100 1 319 1.2E-97 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS10875 875a07c178ddc505889cfd3926f040a1 322 SUPERFAMILY SSF51430 1 319 9.95E-93 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS10875 875a07c178ddc505889cfd3926f040a1 322 Pfam PF00248 Aldo/keto reductase family 16 318 2.7E-71 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS09640 b4113efa76a40665d891e20609af0c58 363 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 12 363 0.0 T 05-07-2017 IPR011673 Protein of unknown function DUF1615 AC028_RS09640 b4113efa76a40665d891e20609af0c58 363 Pfam PF07759 Protein of unknown function (DUF1615) 48 362 5.2E-138 T 05-07-2017 IPR011673 Protein of unknown function DUF1615 AC028_RS11705 1953bc0195e93e3e9135a0c85e546a51 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.258 T 05-07-2017 IPR023036 Ribosomal protein S14, bacterial/plastid AC028_RS11705 1953bc0195e93e3e9135a0c85e546a51 101 SUPERFAMILY SSF57716 2 101 1.07E-34 T 05-07-2017 AC028_RS11705 1953bc0195e93e3e9135a0c85e546a51 101 Gene3D G3DSA:4.10.830.10 42 101 6.5E-28 T 05-07-2017 AC028_RS11705 1953bc0195e93e3e9135a0c85e546a51 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.6E-23 T 05-07-2017 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS04705 cda7522f59593d8ed22ce3e9cef78ee9 109 PIRSF PIRSF029416 1 106 4.6E-51 T 05-07-2017 IPR016919 Uncharacterised conserved protein UCP029416, tyrosine-protein phosphatase, Mlr4629 AC028_RS04705 cda7522f59593d8ed22ce3e9cef78ee9 109 Gene3D G3DSA:3.40.50.270 1 34 1.0E-6 T 05-07-2017 AC028_RS04705 cda7522f59593d8ed22ce3e9cef78ee9 109 SUPERFAMILY SSF52788 1 105 2.09E-19 T 05-07-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily AC028_RS04705 cda7522f59593d8ed22ce3e9cef78ee9 109 SMART SM00226 1 105 0.0047 T 05-07-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily AC028_RS04020 0c2f7becb53b5f99e7ed04ea981b95c2 178 Pfam PF01636 Phosphotransferase enzyme family 24 109 2.0E-5 T 05-07-2017 IPR002575 Aminoglycoside phosphotransferase AC028_RS04020 0c2f7becb53b5f99e7ed04ea981b95c2 178 Gene3D G3DSA:1.10.510.10 67 124 3.4E-10 T 05-07-2017 AC028_RS04020 0c2f7becb53b5f99e7ed04ea981b95c2 178 SUPERFAMILY SSF56112 9 122 8.88E-18 T 05-07-2017 IPR011009 Protein kinase-like domain AC028_RS10710 c92b19c81d48fa69bd2e90e6c47778fc 326 SMART SM00829 16 323 1.6E-40 T 05-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AC028_RS10710 c92b19c81d48fa69bd2e90e6c47778fc 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 90 2.3E-7 T 05-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AC028_RS10710 c92b19c81d48fa69bd2e90e6c47778fc 326 Pfam PF13602 Zinc-binding dehydrogenase 186 323 2.4E-28 T 05-07-2017 AC028_RS10710 c92b19c81d48fa69bd2e90e6c47778fc 326 SUPERFAMILY SSF50129 12 141 6.24E-38 T 05-07-2017 IPR011032 GroES-like AC028_RS10710 c92b19c81d48fa69bd2e90e6c47778fc 326 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 6 324 6.0E-130 T 05-07-2017 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 AC028_RS10710 c92b19c81d48fa69bd2e90e6c47778fc 326 Gene3D G3DSA:3.40.50.720 149 262 1.2E-28 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS10710 c92b19c81d48fa69bd2e90e6c47778fc 326 SUPERFAMILY SSF51735 114 288 4.67E-46 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS10710 c92b19c81d48fa69bd2e90e6c47778fc 326 Gene3D G3DSA:3.90.180.10 5 148 2.7E-45 T 05-07-2017 IPR011032 GroES-like AC028_RS06490 82e32771c8d3e8a9d774d77a8ed2c268 320 Pfam PF14094 Domain of unknown function (DUF4272) 248 316 1.2E-21 T 05-07-2017 IPR025368 Protein of unknown function DUF4272 AC028_RS06490 82e32771c8d3e8a9d774d77a8ed2c268 320 Pfam PF14094 Domain of unknown function (DUF4272) 133 238 1.4E-22 T 05-07-2017 IPR025368 Protein of unknown function DUF4272 AC028_RS04370 3b6b626cae4eec60f124f77de3074c92 321 Pfam PF02237 Biotin protein ligase C terminal domain 274 319 1.4E-6 T 05-07-2017 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS04370 3b6b626cae4eec60f124f77de3074c92 321 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 87 318 1.3E-46 T 05-07-2017 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS04370 3b6b626cae4eec60f124f77de3074c92 321 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 2 319 30.337 T 05-07-2017 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 AC028_RS04370 3b6b626cae4eec60f124f77de3074c92 321 Pfam PF03099 Biotin/lipoate A/B protein ligase family 90 209 6.1E-9 T 05-07-2017 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AC028_RS04370 3b6b626cae4eec60f124f77de3074c92 321 Gene3D G3DSA:2.30.30.100 274 321 1.3E-12 T 05-07-2017 AC028_RS04370 3b6b626cae4eec60f124f77de3074c92 321 Gene3D G3DSA:1.10.10.10 5 58 6.9E-19 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS04370 3b6b626cae4eec60f124f77de3074c92 321 SUPERFAMILY SSF50037 275 319 4.58E-7 T 05-07-2017 IPR008988 Transcriptional repressor, C-terminal AC028_RS04370 3b6b626cae4eec60f124f77de3074c92 321 Pfam PF08279 HTH domain 11 54 3.3E-10 T 05-07-2017 IPR013196 Helix-turn-helix, type 11 AC028_RS04370 3b6b626cae4eec60f124f77de3074c92 321 SUPERFAMILY SSF55681 84 270 1.82E-47 T 05-07-2017 AC028_RS04370 3b6b626cae4eec60f124f77de3074c92 321 Gene3D G3DSA:3.30.930.10 83 270 6.4E-48 T 05-07-2017 AC028_RS04370 3b6b626cae4eec60f124f77de3074c92 321 SUPERFAMILY SSF46785 5 56 5.54E-9 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS17385 b154f7240e163f09b3a9efcab7c396c2 882 Pfam PF01411 tRNA synthetases class II (A) 11 562 4.0E-213 T 05-07-2017 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AC028_RS17385 b154f7240e163f09b3a9efcab7c396c2 882 SUPERFAMILY SSF55681 7 257 3.73E-106 T 05-07-2017 AC028_RS17385 b154f7240e163f09b3a9efcab7c396c2 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 211 222 4.0E-32 T 05-07-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AC028_RS17385 b154f7240e163f09b3a9efcab7c396c2 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 238 251 4.0E-32 T 05-07-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AC028_RS17385 b154f7240e163f09b3a9efcab7c396c2 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 284 300 4.0E-32 T 05-07-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AC028_RS17385 b154f7240e163f09b3a9efcab7c396c2 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 308 321 4.0E-32 T 05-07-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AC028_RS17385 b154f7240e163f09b3a9efcab7c396c2 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 80 91 4.0E-32 T 05-07-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AC028_RS17385 b154f7240e163f09b3a9efcab7c396c2 882 Gene3D G3DSA:3.30.930.10 7 253 1.3E-120 T 05-07-2017 AC028_RS17385 b154f7240e163f09b3a9efcab7c396c2 882 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 881 195.186 T 05-07-2017 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AC028_RS17385 b154f7240e163f09b3a9efcab7c396c2 882 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 12 860 1.7E-304 T 05-07-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AC028_RS17385 b154f7240e163f09b3a9efcab7c396c2 882 SUPERFAMILY SSF55186 558 715 3.4E-53 T 05-07-2017 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AC028_RS17385 b154f7240e163f09b3a9efcab7c396c2 882 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 659 702 1.7E-17 T 05-07-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AC028_RS17385 b154f7240e163f09b3a9efcab7c396c2 882 Pfam PF02272 DHHA1 domain 806 871 2.8E-11 T 05-07-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AC028_RS17385 b154f7240e163f09b3a9efcab7c396c2 882 SUPERFAMILY SSF101353 258 447 1.7E-58 T 05-07-2017 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 AC028_RS17385 b154f7240e163f09b3a9efcab7c396c2 882 SMART SM00863 659 702 5.2E-22 T 05-07-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AC028_RS17385 b154f7240e163f09b3a9efcab7c396c2 882 SUPERFAMILY SSF50447 458 554 3.3E-17 T 05-07-2017 IPR009000 Translation protein, beta-barrel domain AC028_RS10810 775e97eccd1b0f1508679ff62ddf1eca 400 Gene3D G3DSA:3.30.1330.60 282 398 2.7E-32 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS10810 775e97eccd1b0f1508679ff62ddf1eca 400 PRINTS PR01021 OMPA domain signature 324 339 4.3E-16 T 05-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AC028_RS10810 775e97eccd1b0f1508679ff62ddf1eca 400 PRINTS PR01021 OMPA domain signature 294 316 4.3E-16 T 05-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AC028_RS10810 775e97eccd1b0f1508679ff62ddf1eca 400 PRINTS PR01021 OMPA domain signature 339 355 4.3E-16 T 05-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AC028_RS10810 775e97eccd1b0f1508679ff62ddf1eca 400 SUPERFAMILY SSF103088 282 398 9.81E-30 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS10810 775e97eccd1b0f1508679ff62ddf1eca 400 Pfam PF00691 OmpA family 293 381 5.9E-16 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS15985 4d21a8613241e726af735c26decc194e 639 SUPERFAMILY SSF51011 563 636 5.35E-6 T 05-07-2017 AC028_RS15985 4d21a8613241e726af735c26decc194e 639 Gene3D G3DSA:2.60.40.1180 566 636 2.0E-12 T 05-07-2017 IPR013780 Glycosyl hydrolase, all-beta AC028_RS15985 4d21a8613241e726af735c26decc194e 639 Pfam PF00128 Alpha amylase, catalytic domain 103 311 1.8E-32 T 05-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AC028_RS15985 4d21a8613241e726af735c26decc194e 639 Gene3D G3DSA:3.90.400.10 182 252 3.4E-21 T 05-07-2017 AC028_RS15985 4d21a8613241e726af735c26decc194e 639 Gene3D G3DSA:3.20.20.80 92 181 1.3E-81 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS15985 4d21a8613241e726af735c26decc194e 639 Gene3D G3DSA:3.20.20.80 260 551 1.3E-81 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS15985 4d21a8613241e726af735c26decc194e 639 SUPERFAMILY SSF51445 19 557 4.97E-96 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS15985 4d21a8613241e726af735c26decc194e 639 SMART SM00642 95 530 6.9E-29 T 05-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AC028_RS11925 0f09a4cfcf56e72c395c589a2b6a1fad 719 SUPERFAMILY SSF50494 644 680 8.24E-24 T 05-07-2017 IPR009003 Peptidase S1, PA clan AC028_RS11925 0f09a4cfcf56e72c395c589a2b6a1fad 719 SUPERFAMILY SSF50494 212 298 8.24E-24 T 05-07-2017 IPR009003 Peptidase S1, PA clan AC028_RS11925 0f09a4cfcf56e72c395c589a2b6a1fad 719 SUPERFAMILY SSF50494 28 87 8.24E-24 T 05-07-2017 IPR009003 Peptidase S1, PA clan AC028_RS11925 0f09a4cfcf56e72c395c589a2b6a1fad 719 Gene3D G3DSA:2.40.10.10 596 609 5.5E-14 T 05-07-2017 AC028_RS11925 0f09a4cfcf56e72c395c589a2b6a1fad 719 Gene3D G3DSA:2.40.10.10 642 699 5.5E-14 T 05-07-2017 AC028_RS11925 0f09a4cfcf56e72c395c589a2b6a1fad 719 Pfam PF10459 Peptidase S46 22 717 9.1E-258 T 05-07-2017 IPR019500 Peptidase S46 GO:0008239|GO:0070009 AC028_RS17755 f80444bd51de6da2c2d658dc7b70cfc4 835 SUPERFAMILY SSF55021 402 488 5.24E-21 T 05-07-2017 AC028_RS17755 f80444bd51de6da2c2d658dc7b70cfc4 835 PIRSF PIRSF000727 20 832 0.0 T 05-07-2017 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AC028_RS17755 f80444bd51de6da2c2d658dc7b70cfc4 835 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 675 697 - T 05-07-2017 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AC028_RS17755 f80444bd51de6da2c2d658dc7b70cfc4 835 Gene3D G3DSA:3.30.360.10 651 807 2.7E-56 T 05-07-2017 AC028_RS17755 f80444bd51de6da2c2d658dc7b70cfc4 835 Gene3D G3DSA:3.40.1160.10 17 67 2.0E-65 T 05-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AC028_RS17755 f80444bd51de6da2c2d658dc7b70cfc4 835 Gene3D G3DSA:3.40.1160.10 126 314 2.0E-65 T 05-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AC028_RS17755 f80444bd51de6da2c2d658dc7b70cfc4 835 SUPERFAMILY SSF55347 629 812 3.14E-48 T 05-07-2017 AC028_RS17755 f80444bd51de6da2c2d658dc7b70cfc4 835 ProSitePatterns PS00324 Aspartokinase signature. 22 30 - T 05-07-2017 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AC028_RS17755 f80444bd51de6da2c2d658dc7b70cfc4 835 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 487 621 3.2E-21 T 05-07-2017 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AC028_RS17755 f80444bd51de6da2c2d658dc7b70cfc4 835 Pfam PF00742 Homoserine dehydrogenase 629 825 2.6E-50 T 05-07-2017 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AC028_RS17755 f80444bd51de6da2c2d658dc7b70cfc4 835 Pfam PF00696 Amino acid kinase family 20 300 1.6E-42 T 05-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AC028_RS17755 f80444bd51de6da2c2d658dc7b70cfc4 835 SUPERFAMILY SSF55021 320 396 3.27E-20 T 05-07-2017 AC028_RS17755 f80444bd51de6da2c2d658dc7b70cfc4 835 Pfam PF13840 ACT domain 328 389 5.6E-8 T 05-07-2017 IPR027795 GATS-like ACT domain AC028_RS17755 f80444bd51de6da2c2d658dc7b70cfc4 835 Pfam PF13840 ACT domain 409 469 2.1E-7 T 05-07-2017 IPR027795 GATS-like ACT domain AC028_RS17755 f80444bd51de6da2c2d658dc7b70cfc4 835 SUPERFAMILY SSF53633 21 313 1.48E-73 T 05-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AC028_RS17755 f80444bd51de6da2c2d658dc7b70cfc4 835 Gene3D G3DSA:3.40.50.720 479 650 7.8E-57 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS17755 f80444bd51de6da2c2d658dc7b70cfc4 835 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 20 474 7.7E-108 T 05-07-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AC028_RS17755 f80444bd51de6da2c2d658dc7b70cfc4 835 SUPERFAMILY SSF51735 479 651 1.81E-33 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS09630 6ffcb6a9a7f68d39efd2c1637cd4de66 770 Pfam PF00326 Prolyl oligopeptidase family 557 753 1.4E-47 T 05-07-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AC028_RS09630 6ffcb6a9a7f68d39efd2c1637cd4de66 770 SUPERFAMILY SSF82171 267 489 4.32E-36 T 05-07-2017 AC028_RS09630 6ffcb6a9a7f68d39efd2c1637cd4de66 770 SUPERFAMILY SSF82171 150 236 4.32E-36 T 05-07-2017 AC028_RS09630 6ffcb6a9a7f68d39efd2c1637cd4de66 770 SUPERFAMILY SSF82171 57 92 4.32E-36 T 05-07-2017 AC028_RS09630 6ffcb6a9a7f68d39efd2c1637cd4de66 770 Gene3D G3DSA:3.40.50.1820 498 754 7.2E-65 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS09630 6ffcb6a9a7f68d39efd2c1637cd4de66 770 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 113 467 7.1E-69 T 05-07-2017 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AC028_RS09630 6ffcb6a9a7f68d39efd2c1637cd4de66 770 Gene3D G3DSA:2.140.10.30 52 496 6.0E-64 T 05-07-2017 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AC028_RS09630 6ffcb6a9a7f68d39efd2c1637cd4de66 770 SUPERFAMILY SSF53474 498 753 1.61E-56 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS11980 26d22910a6ee98df7cf4f092d1754d26 180 SMART SM00014 63 172 1.9E-14 T 05-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AC028_RS11980 26d22910a6ee98df7cf4f092d1754d26 180 Pfam PF01569 PAP2 superfamily 68 173 8.8E-20 T 05-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AC028_RS11980 26d22910a6ee98df7cf4f092d1754d26 180 SUPERFAMILY SSF48317 12 173 5.49E-35 T 05-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AC028_RS11980 26d22910a6ee98df7cf4f092d1754d26 180 Gene3D G3DSA:1.20.144.10 16 173 2.2E-37 T 05-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AC028_RS13365 82972e2959f1e9840b39e73e40d338c0 265 Gene3D G3DSA:3.90.226.10 12 203 6.6E-65 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS13365 82972e2959f1e9840b39e73e40d338c0 265 Gene3D G3DSA:1.10.12.10 208 265 4.0E-19 T 05-07-2017 IPR014748 Crontonase, C-terminal AC028_RS13365 82972e2959f1e9840b39e73e40d338c0 265 SUPERFAMILY SSF52096 12 265 4.98E-78 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS13365 82972e2959f1e9840b39e73e40d338c0 265 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 05-07-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AC028_RS13365 82972e2959f1e9840b39e73e40d338c0 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 264 5.5E-55 T 05-07-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AC028_RS05355 bd55f61778f7841bc07c8a4d6fb60b80 112 SUPERFAMILY SSF54913 1 112 4.45E-46 T 05-07-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta AC028_RS05355 bd55f61778f7841bc07c8a4d6fb60b80 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 7.9E-43 T 05-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AC028_RS05355 bd55f61778f7841bc07c8a4d6fb60b80 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 05-07-2017 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AC028_RS05355 bd55f61778f7841bc07c8a4d6fb60b80 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 05-07-2017 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AC028_RS05355 bd55f61778f7841bc07c8a4d6fb60b80 112 Gene3D G3DSA:3.30.70.120 1 112 6.7E-51 T 05-07-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AC028_RS05355 bd55f61778f7841bc07c8a4d6fb60b80 112 PIRSF PIRSF039144 1 112 1.1E-53 T 05-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AC028_RS05355 bd55f61778f7841bc07c8a4d6fb60b80 112 SMART SM00938 4 105 2.8E-67 T 05-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AC028_RS05355 bd55f61778f7841bc07c8a4d6fb60b80 112 PRINTS PR00340 P-II protein signature 83 103 5.6E-44 T 05-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AC028_RS05355 bd55f61778f7841bc07c8a4d6fb60b80 112 PRINTS PR00340 P-II protein signature 2 17 5.6E-44 T 05-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AC028_RS05355 bd55f61778f7841bc07c8a4d6fb60b80 112 PRINTS PR00340 P-II protein signature 23 41 5.6E-44 T 05-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AC028_RS05355 bd55f61778f7841bc07c8a4d6fb60b80 112 PRINTS PR00340 P-II protein signature 52 75 5.6E-44 T 05-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AC028_RS06965 1c5036da25cd3b6b23e73ffa000ef39c 261 SUPERFAMILY SSF144091 20 198 2.35E-26 T 05-07-2017 AC028_RS06965 1c5036da25cd3b6b23e73ffa000ef39c 261 Pfam PF01694 Rhomboid family 60 195 2.3E-18 T 05-07-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AC028_RS06965 1c5036da25cd3b6b23e73ffa000ef39c 261 Gene3D G3DSA:1.20.1540.10 24 194 1.1E-15 T 05-07-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AC028_RS17330 20d1d2c16c7e3aac24f6e12ddae4c599 648 Pfam PF06480 FtsH Extracellular 10 100 6.5E-10 T 05-07-2017 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 AC028_RS17330 20d1d2c16c7e3aac24f6e12ddae4c599 648 SUPERFAMILY SSF52540 161 406 1.66E-73 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS17330 20d1d2c16c7e3aac24f6e12ddae4c599 648 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 8 629 37.545 T 05-07-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 AC028_RS17330 20d1d2c16c7e3aac24f6e12ddae4c599 648 SMART SM00382 199 338 1.6E-26 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS17330 20d1d2c16c7e3aac24f6e12ddae4c599 648 Gene3D G3DSA:3.40.50.300 163 346 8.7E-65 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS17330 20d1d2c16c7e3aac24f6e12ddae4c599 648 Pfam PF01434 Peptidase family M41 397 606 5.9E-82 T 05-07-2017 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 AC028_RS17330 20d1d2c16c7e3aac24f6e12ddae4c599 648 SUPERFAMILY SSF140990 418 617 2.35E-76 T 05-07-2017 AC028_RS17330 20d1d2c16c7e3aac24f6e12ddae4c599 648 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 3.1E-46 T 05-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AC028_RS17330 20d1d2c16c7e3aac24f6e12ddae4c599 648 ProSitePatterns PS00674 AAA-protein family signature. 306 324 - T 05-07-2017 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AC028_RS17330 20d1d2c16c7e3aac24f6e12ddae4c599 648 Gene3D G3DSA:1.10.8.60 347 420 1.9E-27 T 05-07-2017 AC028_RS17330 20d1d2c16c7e3aac24f6e12ddae4c599 648 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 114 608 1.4E-240 T 05-07-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 AC028_RS14785 88722efea67d8b3c34a3d901c0d1561d 234 Gene3D G3DSA:2.40.160.20 83 191 7.8E-6 T 05-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AC028_RS09490 7ead67af76c69699a9ba346e284b4785 233 Gene3D G3DSA:1.20.5.620 42 78 9.6E-4 T 05-07-2017 IPR028987 F-type ATP synthase subunit B-like, membrane domain AC028_RS09490 7ead67af76c69699a9ba346e284b4785 233 Pfam PF02108 Flagellar assembly protein FliH 119 213 5.2E-9 T 05-07-2017 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AC028_RS09490 7ead67af76c69699a9ba346e284b4785 233 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 47 206 1.3E-36 T 05-07-2017 IPR012842 Type III secretion system HrpE/YscL AC028_RS17275 8a0a469b6652af8b35d9b52477d0de85 259 SUPERFAMILY SSF53448 5 224 1.22E-52 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS17275 8a0a469b6652af8b35d9b52477d0de85 259 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 225 2.1E-61 T 05-07-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AC028_RS17275 8a0a469b6652af8b35d9b52477d0de85 259 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 230 28.822 T 05-07-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AC028_RS17275 8a0a469b6652af8b35d9b52477d0de85 259 Gene3D G3DSA:3.90.550.10 4 230 3.7E-63 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS17275 8a0a469b6652af8b35d9b52477d0de85 259 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 225 1.7E-70 T 05-07-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AC028_RS17275 8a0a469b6652af8b35d9b52477d0de85 259 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 103 110 - T 05-07-2017 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AC028_RS14435 03da4d20431d1f5ba7fccaa26ec15fbc 299 SUPERFAMILY SSF47240 1 285 3.61E-85 T 05-07-2017 IPR009078 Ferritin-like superfamily AC028_RS14435 03da4d20431d1f5ba7fccaa26ec15fbc 299 Gene3D G3DSA:1.20.1260.10 1 197 2.8E-75 T 05-07-2017 IPR012347 Ferritin-related AC028_RS14435 03da4d20431d1f5ba7fccaa26ec15fbc 299 Pfam PF05067 Manganese containing catalase 1 286 5.1E-85 T 05-07-2017 IPR007760 Manganese catalase AC028_RS02995 216558e6bd6361d1b226966bc9145759 308 Pfam PF00462 Glutaredoxin 20 84 2.6E-19 T 05-07-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AC028_RS02995 216558e6bd6361d1b226966bc9145759 308 Pfam PF00581 Rhodanese-like domain 211 299 5.4E-8 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS02995 216558e6bd6361d1b226966bc9145759 308 SMART SM00450 208 303 1.0E-12 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS02995 216558e6bd6361d1b226966bc9145759 308 Gene3D G3DSA:3.40.30.10 11 103 8.5E-31 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS02995 216558e6bd6361d1b226966bc9145759 308 SUPERFAMILY SSF52833 8 104 6.77E-31 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS02995 216558e6bd6361d1b226966bc9145759 308 SUPERFAMILY SSF52821 201 302 3.01E-21 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS02995 216558e6bd6361d1b226966bc9145759 308 Gene3D G3DSA:3.40.250.10 204 304 2.6E-21 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS02995 216558e6bd6361d1b226966bc9145759 308 SUPERFAMILY SSF89360 114 201 6.87E-11 T 05-07-2017 IPR000361 FeS cluster biogenesis AC028_RS02995 216558e6bd6361d1b226966bc9145759 308 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 9 103 7.6E-40 T 05-07-2017 IPR004480 Monothiol glutaredoxin-related AC028_RS02995 216558e6bd6361d1b226966bc9145759 308 Gene3D G3DSA:2.60.300.12 112 199 5.8E-6 T 05-07-2017 IPR000361 FeS cluster biogenesis AC028_RS03255 f0d981e0798429fadcc458ea0b643fa5 1348 SUPERFAMILY SSF52317 1093 1347 1.48E-91 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS03255 f0d981e0798429fadcc458ea0b643fa5 1348 SMART SM01211 1096 1347 8.3E-146 T 05-07-2017 AC028_RS03255 f0d981e0798429fadcc458ea0b643fa5 1348 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1348 20.5 T 05-07-2017 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AC028_RS03255 f0d981e0798429fadcc458ea0b643fa5 1348 SUPERFAMILY SSF56042 872 1089 7.33E-49 T 05-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AC028_RS03255 f0d981e0798429fadcc458ea0b643fa5 1348 Gene3D G3DSA:3.30.1330.10 203 411 2.8E-35 T 05-07-2017 IPR016188 PurM-like, N-terminal domain AC028_RS03255 f0d981e0798429fadcc458ea0b643fa5 1348 Gene3D G3DSA:3.30.1330.10 668 819 1.9E-14 T 05-07-2017 IPR016188 PurM-like, N-terminal domain AC028_RS03255 f0d981e0798429fadcc458ea0b643fa5 1348 SUPERFAMILY SSF56042 618 678 1.35E-49 T 05-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AC028_RS03255 f0d981e0798429fadcc458ea0b643fa5 1348 SUPERFAMILY SSF56042 421 585 1.35E-49 T 05-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AC028_RS03255 f0d981e0798429fadcc458ea0b643fa5 1348 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 810 0.0 T 05-07-2017 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AC028_RS03255 f0d981e0798429fadcc458ea0b643fa5 1348 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1096 1347 2.9E-99 T 05-07-2017 AC028_RS03255 f0d981e0798429fadcc458ea0b643fa5 1348 Gene3D G3DSA:3.40.50.880 1097 1320 2.6E-10 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS03255 f0d981e0798429fadcc458ea0b643fa5 1348 SUPERFAMILY SSF82697 1 148 1.1E-32 T 05-07-2017 AC028_RS03255 f0d981e0798429fadcc458ea0b643fa5 1348 SUPERFAMILY SSF55326 213 415 3.42E-51 T 05-07-2017 AC028_RS03255 f0d981e0798429fadcc458ea0b643fa5 1348 SUPERFAMILY SSF109736 158 212 4.45E-18 T 05-07-2017 AC028_RS03255 f0d981e0798429fadcc458ea0b643fa5 1348 SUPERFAMILY SSF55326 643 814 1.67E-57 T 05-07-2017 AC028_RS03255 f0d981e0798429fadcc458ea0b643fa5 1348 SUPERFAMILY SSF55326 842 864 1.67E-57 T 05-07-2017 AC028_RS03255 f0d981e0798429fadcc458ea0b643fa5 1348 Pfam PF02769 AIR synthase related protein, C-terminal domain 421 579 1.3E-30 T 05-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AC028_RS03255 f0d981e0798429fadcc458ea0b643fa5 1348 Pfam PF02769 AIR synthase related protein, C-terminal domain 878 1022 8.3E-10 T 05-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AC028_RS05710 c66423dbdc7d26745b53cc23de08c301 566 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 451 475 5.6E-6 T 05-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AC028_RS05710 c66423dbdc7d26745b53cc23de08c301 566 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 479 498 5.6E-6 T 05-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AC028_RS05710 c66423dbdc7d26745b53cc23de08c301 566 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 509 529 5.6E-6 T 05-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AC028_RS05710 c66423dbdc7d26745b53cc23de08c301 566 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 425 443 5.6E-6 T 05-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AC028_RS05710 c66423dbdc7d26745b53cc23de08c301 566 SUPERFAMILY SSF82171 58 285 3.92E-17 T 05-07-2017 AC028_RS05710 c66423dbdc7d26745b53cc23de08c301 566 SUPERFAMILY SSF82171 333 382 3.92E-17 T 05-07-2017 AC028_RS05710 c66423dbdc7d26745b53cc23de08c301 566 SUPERFAMILY SSF53474 393 551 2.43E-41 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS05710 c66423dbdc7d26745b53cc23de08c301 566 Gene3D G3DSA:2.130.10.10 42 289 6.9E-21 T 05-07-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AC028_RS05710 c66423dbdc7d26745b53cc23de08c301 566 Pfam PF00326 Prolyl oligopeptidase family 447 542 1.8E-27 T 05-07-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AC028_RS05710 c66423dbdc7d26745b53cc23de08c301 566 Gene3D G3DSA:3.40.50.1820 325 565 7.8E-56 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS03730 9900f4250b14ff8d92750d7e54bacec7 393 Gene3D G3DSA:1.20.1250.20 203 387 9.6E-16 T 05-07-2017 AC028_RS03730 9900f4250b14ff8d92750d7e54bacec7 393 Pfam PF07690 Major Facilitator Superfamily 13 268 1.0E-33 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS03730 9900f4250b14ff8d92750d7e54bacec7 393 Gene3D G3DSA:1.20.1250.20 9 199 8.8E-31 T 05-07-2017 AC028_RS03730 9900f4250b14ff8d92750d7e54bacec7 393 SUPERFAMILY SSF103473 3 385 4.58E-59 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS15525 ea2869ae0806f0bf664f76be01cc498a 376 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 135 - T 05-07-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AC028_RS15525 ea2869ae0806f0bf664f76be01cc498a 376 Gene3D G3DSA:3.30.70.360 188 286 3.2E-31 T 05-07-2017 IPR011650 Peptidase M20, dimerisation domain AC028_RS15525 ea2869ae0806f0bf664f76be01cc498a 376 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 5 373 4.8E-166 T 05-07-2017 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AC028_RS15525 ea2869ae0806f0bf664f76be01cc498a 376 Gene3D G3DSA:3.40.630.10 316 374 6.1E-71 T 05-07-2017 AC028_RS15525 ea2869ae0806f0bf664f76be01cc498a 376 Gene3D G3DSA:3.40.630.10 1 187 6.1E-71 T 05-07-2017 AC028_RS15525 ea2869ae0806f0bf664f76be01cc498a 376 SUPERFAMILY SSF55031 179 287 1.09E-27 T 05-07-2017 IPR011650 Peptidase M20, dimerisation domain AC028_RS15525 ea2869ae0806f0bf664f76be01cc498a 376 Pfam PF07687 Peptidase dimerisation domain 175 282 4.0E-25 T 05-07-2017 IPR011650 Peptidase M20, dimerisation domain AC028_RS15525 ea2869ae0806f0bf664f76be01cc498a 376 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 375 49.87 T 05-07-2017 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AC028_RS15525 ea2869ae0806f0bf664f76be01cc498a 376 Pfam PF01546 Peptidase family M20/M25/M40 63 371 5.1E-41 T 05-07-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AC028_RS15525 ea2869ae0806f0bf664f76be01cc498a 376 SUPERFAMILY SSF53187 2 178 4.98E-62 T 05-07-2017 AC028_RS15525 ea2869ae0806f0bf664f76be01cc498a 376 SUPERFAMILY SSF53187 292 373 4.98E-62 T 05-07-2017 AC028_RS02360 30f369cfcf902fc97d7685fda6d6444d 904 SUPERFAMILY SSF56935 276 467 7.33E-75 T 05-07-2017 AC028_RS02360 30f369cfcf902fc97d7685fda6d6444d 904 SUPERFAMILY SSF56935 534 904 7.33E-75 T 05-07-2017 AC028_RS02360 30f369cfcf902fc97d7685fda6d6444d 904 SUPERFAMILY SSF56935 26 238 7.33E-75 T 05-07-2017 AC028_RS02360 30f369cfcf902fc97d7685fda6d6444d 904 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 34 903 2.5E-193 T 05-07-2017 IPR010104 Bacterial TonB-dependent receptor AC028_RS02360 30f369cfcf902fc97d7685fda6d6444d 904 Pfam PF00593 TonB dependent receptor 614 903 1.7E-26 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02360 30f369cfcf902fc97d7685fda6d6444d 904 Gene3D G3DSA:2.170.130.10 60 167 5.8E-15 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS02360 30f369cfcf902fc97d7685fda6d6444d 904 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 165 1.0E-13 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS02360 30f369cfcf902fc97d7685fda6d6444d 904 Gene3D G3DSA:2.40.170.20 168 390 5.2E-63 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02360 30f369cfcf902fc97d7685fda6d6444d 904 Gene3D G3DSA:2.40.170.20 423 466 5.2E-63 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02360 30f369cfcf902fc97d7685fda6d6444d 904 Gene3D G3DSA:2.40.170.20 535 904 5.2E-63 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS11825 a093700b993ae2474da5437ae80098d4 328 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 154 4.8E-35 T 05-07-2017 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AC028_RS11825 a093700b993ae2474da5437ae80098d4 328 Hamap MF_01517 Malate dehydrogenase [mdh]. 1 327 55.643 T 05-07-2017 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AC028_RS11825 a093700b993ae2474da5437ae80098d4 328 SUPERFAMILY SSF51735 3 157 2.07E-44 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS11825 a093700b993ae2474da5437ae80098d4 328 Gene3D G3DSA:3.90.110.10 157 327 2.9E-71 T 05-07-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AC028_RS11825 a093700b993ae2474da5437ae80098d4 328 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 3 321 5.2E-143 T 05-07-2017 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AC028_RS11825 a093700b993ae2474da5437ae80098d4 328 SUPERFAMILY SSF56327 159 327 1.16E-58 T 05-07-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AC028_RS11825 a093700b993ae2474da5437ae80098d4 328 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 159 321 9.2E-31 T 05-07-2017 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AC028_RS11825 a093700b993ae2474da5437ae80098d4 328 PIRSF PIRSF000102 1 325 1.0E-63 T 05-07-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AC028_RS11825 a093700b993ae2474da5437ae80098d4 328 Gene3D G3DSA:3.40.50.720 3 155 4.9E-56 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS16000 f3469d16c6035a9077a65561711ab95c 343 SMART SM00354 13 83 7.1E-16 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS16000 f3469d16c6035a9077a65561711ab95c 343 Gene3D G3DSA:1.10.260.40 15 65 5.5E-20 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS16000 f3469d16c6035a9077a65561711ab95c 343 Pfam PF13377 Periplasmic binding protein-like domain 185 342 1.3E-38 T 05-07-2017 AC028_RS16000 f3469d16c6035a9077a65561711ab95c 343 SUPERFAMILY SSF47413 13 72 1.97E-14 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS16000 f3469d16c6035a9077a65561711ab95c 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 16 34 - T 05-07-2017 AC028_RS16000 f3469d16c6035a9077a65561711ab95c 343 Gene3D G3DSA:3.40.50.2300 66 188 2.4E-29 T 05-07-2017 AC028_RS16000 f3469d16c6035a9077a65561711ab95c 343 SUPERFAMILY SSF53822 87 342 6.28E-59 T 05-07-2017 IPR028082 Periplasmic binding protein-like I AC028_RS16000 f3469d16c6035a9077a65561711ab95c 343 Gene3D G3DSA:3.40.50.2300 189 326 5.7E-49 T 05-07-2017 AC028_RS16000 f3469d16c6035a9077a65561711ab95c 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 16 58 2.4E-11 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS07940 e1516c22327d251699dc6119a714da05 362 SUPERFAMILY SSF52518 6 356 5.18E-88 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS07940 e1516c22327d251699dc6119a714da05 362 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 11 353 5.0E-130 T 05-07-2017 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AC028_RS07940 e1516c22327d251699dc6119a714da05 362 Gene3D G3DSA:3.40.50.970 6 353 7.0E-113 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS07940 e1516c22327d251699dc6119a714da05 362 Pfam PF00676 Dehydrogenase E1 component 41 330 8.4E-69 T 05-07-2017 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 AC028_RS06980 27e9aaa78b2ddb234501cc5d51aea209 285 Pfam PF01569 PAP2 superfamily 136 239 2.4E-17 T 05-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AC028_RS06980 27e9aaa78b2ddb234501cc5d51aea209 285 ProSitePatterns PS01157 Class A bacterial acid phosphatases signature. 173 180 - T 05-07-2017 IPR018296 Acid phosphatase, class A, bacterial, conserved site GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 AC028_RS06980 27e9aaa78b2ddb234501cc5d51aea209 285 PRINTS PR00483 Bacterial acid phosphatase class A signature 201 225 3.5E-38 T 05-07-2017 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 AC028_RS06980 27e9aaa78b2ddb234501cc5d51aea209 285 PRINTS PR00483 Bacterial acid phosphatase class A signature 143 161 3.5E-38 T 05-07-2017 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 AC028_RS06980 27e9aaa78b2ddb234501cc5d51aea209 285 PRINTS PR00483 Bacterial acid phosphatase class A signature 79 98 3.5E-38 T 05-07-2017 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 AC028_RS06980 27e9aaa78b2ddb234501cc5d51aea209 285 PRINTS PR00483 Bacterial acid phosphatase class A signature 169 195 3.5E-38 T 05-07-2017 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 AC028_RS06980 27e9aaa78b2ddb234501cc5d51aea209 285 PRINTS PR00483 Bacterial acid phosphatase class A signature 235 253 3.5E-38 T 05-07-2017 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 AC028_RS06980 27e9aaa78b2ddb234501cc5d51aea209 285 Gene3D G3DSA:1.20.144.10 43 257 1.5E-52 T 05-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AC028_RS06980 27e9aaa78b2ddb234501cc5d51aea209 285 SUPERFAMILY SSF48317 44 257 9.16E-48 T 05-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AC028_RS06980 27e9aaa78b2ddb234501cc5d51aea209 285 PIRSF PIRSF000897 9 276 1.7E-117 T 05-07-2017 IPR011158 Nonspecific acid phosphatase, class A GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 AC028_RS06980 27e9aaa78b2ddb234501cc5d51aea209 285 SMART SM00014 125 238 7.8E-18 T 05-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AC028_RS12410 1510f277f7d17c65cb4ccfeb2ad57bee 186 PIRSF PIRSF018063 19 186 5.2E-67 T 05-07-2017 IPR014490 Uncharacterised conserved protein UCP018063, ferritin fold AC028_RS12410 1510f277f7d17c65cb4ccfeb2ad57bee 186 SUPERFAMILY SSF47240 37 181 9.76E-40 T 05-07-2017 IPR009078 Ferritin-like superfamily AC028_RS12410 1510f277f7d17c65cb4ccfeb2ad57bee 186 Pfam PF00210 Ferritin-like domain 44 181 1.7E-28 T 05-07-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AC028_RS12410 1510f277f7d17c65cb4ccfeb2ad57bee 186 Gene3D G3DSA:1.20.1260.10 35 181 2.1E-53 T 05-07-2017 IPR012347 Ferritin-related AC028_RS21490 938243e9721ec818abc232d5316f9894 192 SUPERFAMILY SSF46609 2 83 4.19E-24 T 05-07-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS21490 938243e9721ec818abc232d5316f9894 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 7 81 1.5E-19 T 05-07-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS21490 938243e9721ec818abc232d5316f9894 192 Gene3D G3DSA:1.10.287.990 21 81 1.1E-14 T 05-07-2017 AC028_RS21490 938243e9721ec818abc232d5316f9894 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 1.2E-36 T 05-07-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS21490 938243e9721ec818abc232d5316f9894 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.0E-14 T 05-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS21490 938243e9721ec818abc232d5316f9894 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.0E-14 T 05-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS21490 938243e9721ec818abc232d5316f9894 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 1.0E-14 T 05-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS21490 938243e9721ec818abc232d5316f9894 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.0E-14 T 05-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS21490 938243e9721ec818abc232d5316f9894 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.0E-14 T 05-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS21490 938243e9721ec818abc232d5316f9894 192 SUPERFAMILY SSF54719 86 191 8.12E-41 T 05-07-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS21490 938243e9721ec818abc232d5316f9894 192 PIRSF PIRSF000349 1 192 1.2E-72 T 05-07-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS21490 938243e9721ec818abc232d5316f9894 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 05-07-2017 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS17915 7961094647564c829b8bc5c8f53a611c 298 Gene3D G3DSA:3.20.20.70 4 288 3.8E-89 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS17915 7961094647564c829b8bc5c8f53a611c 298 SUPERFAMILY SSF51569 2 285 2.2E-70 T 05-07-2017 AC028_RS17915 7961094647564c829b8bc5c8f53a611c 298 Pfam PF00682 HMGL-like 5 275 8.1E-52 T 05-07-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 AC028_RS15165 39cf8bfc1a3307f8c4cd6f7c430e8781 314 Gene3D G3DSA:3.40.50.720 6 233 3.3E-34 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS15165 39cf8bfc1a3307f8c4cd6f7c430e8781 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 215 8.4E-19 T 05-07-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AC028_RS15165 39cf8bfc1a3307f8c4cd6f7c430e8781 314 SUPERFAMILY SSF51735 7 266 4.91E-47 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS11370 071302bb71eaf2172a2a7d42d77cd9bf 365 Gene3D G3DSA:3.50.50.60 175 195 4.2E-6 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS11370 071302bb71eaf2172a2a7d42d77cd9bf 365 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 143 355 1.2E-61 T 05-07-2017 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AC028_RS11370 071302bb71eaf2172a2a7d42d77cd9bf 365 Gene3D G3DSA:3.40.50.1770 3 174 4.6E-55 T 05-07-2017 AC028_RS11370 071302bb71eaf2172a2a7d42d77cd9bf 365 SUPERFAMILY SSF51735 139 314 1.32E-37 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS11370 071302bb71eaf2172a2a7d42d77cd9bf 365 Gene3D G3DSA:3.40.50.1770 196 353 4.1E-27 T 05-07-2017 AC028_RS11370 071302bb71eaf2172a2a7d42d77cd9bf 365 SMART SM01002 148 310 4.8E-76 T 05-07-2017 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AC028_RS11370 071302bb71eaf2172a2a7d42d77cd9bf 365 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 05-07-2017 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 AC028_RS11370 071302bb71eaf2172a2a7d42d77cd9bf 365 SUPERFAMILY SSF52283 3 170 5.87E-45 T 05-07-2017 AC028_RS11370 071302bb71eaf2172a2a7d42d77cd9bf 365 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 7 139 1.1E-36 T 05-07-2017 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AC028_RS11370 071302bb71eaf2172a2a7d42d77cd9bf 365 SMART SM01003 6 139 1.5E-54 T 05-07-2017 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AC028_RS15120 662d9163d5d743104b60dd8ed36fceaf 838 SUPERFAMILY SSF53756 456 815 8.9E-40 T 05-07-2017 AC028_RS15120 662d9163d5d743104b60dd8ed36fceaf 838 Pfam PF00534 Glycosyl transferases group 1 224 377 1.5E-28 T 05-07-2017 IPR001296 Glycosyl transferase, family 1 AC028_RS15120 662d9163d5d743104b60dd8ed36fceaf 838 Pfam PF00534 Glycosyl transferases group 1 654 796 1.3E-21 T 05-07-2017 IPR001296 Glycosyl transferase, family 1 AC028_RS15120 662d9163d5d743104b60dd8ed36fceaf 838 Pfam PF13579 Glycosyl transferase 4-like domain 18 186 3.2E-11 T 05-07-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AC028_RS15120 662d9163d5d743104b60dd8ed36fceaf 838 SUPERFAMILY SSF53756 16 403 1.37E-64 T 05-07-2017 AC028_RS15120 662d9163d5d743104b60dd8ed36fceaf 838 Gene3D G3DSA:3.40.50.2000 651 798 3.5E-12 T 05-07-2017 AC028_RS15120 662d9163d5d743104b60dd8ed36fceaf 838 Gene3D G3DSA:3.40.50.2000 212 374 1.7E-21 T 05-07-2017 AC028_RS04445 8f33b9786b99a7506b7e2f7196ea4964 711 Gene3D G3DSA:3.40.50.300 233 278 2.0E-11 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS04445 8f33b9786b99a7506b7e2f7196ea4964 711 Gene3D G3DSA:3.40.50.300 47 145 2.0E-11 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS04445 8f33b9786b99a7506b7e2f7196ea4964 711 Gene3D G3DSA:3.40.50.300 539 687 2.7E-7 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS04445 8f33b9786b99a7506b7e2f7196ea4964 711 SUPERFAMILY SSF52540 59 113 1.43E-15 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS04445 8f33b9786b99a7506b7e2f7196ea4964 711 SUPERFAMILY SSF52540 470 484 1.43E-15 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS04445 8f33b9786b99a7506b7e2f7196ea4964 711 SUPERFAMILY SSF52540 216 296 1.43E-15 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS04445 8f33b9786b99a7506b7e2f7196ea4964 711 SUPERFAMILY SSF52540 516 686 1.43E-15 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS04445 8f33b9786b99a7506b7e2f7196ea4964 711 Pfam PF13307 Helicase C-terminal domain 547 704 5.3E-31 T 05-07-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AC028_RS04445 8f33b9786b99a7506b7e2f7196ea4964 711 SMART SM00491 560 691 7.1E-29 T 05-07-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AC028_RS01130 0d395cc357ea4a6ece90e867e363c68a 243 Pfam PF03932 CutC family 6 204 1.0E-79 T 05-07-2017 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 AC028_RS01130 0d395cc357ea4a6ece90e867e363c68a 243 SUPERFAMILY SSF110395 6 241 6.8E-66 T 05-07-2017 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 AC028_RS01130 0d395cc357ea4a6ece90e867e363c68a 243 Gene3D G3DSA:3.20.20.380 6 242 3.9E-83 T 05-07-2017 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 AC028_RS01130 0d395cc357ea4a6ece90e867e363c68a 243 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 4 241 38.383 T 05-07-2017 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 AC028_RS15195 e58ed67f114cae0b8e86f4472f439a2f 248 SUPERFAMILY SSF52402 1 244 3.05E-77 T 05-07-2017 AC028_RS15195 e58ed67f114cae0b8e86f4472f439a2f 248 Gene3D G3DSA:3.40.50.620 1 244 4.5E-92 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS15195 e58ed67f114cae0b8e86f4472f439a2f 248 SMART SM00893 23 211 8.1E-55 T 05-07-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AC028_RS15195 e58ed67f114cae0b8e86f4472f439a2f 248 PIRSF PIRSF000090 1 248 6.2E-81 T 05-07-2017 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105 AC028_RS15195 e58ed67f114cae0b8e86f4472f439a2f 248 Pfam PF01012 Electron transfer flavoprotein domain 26 206 4.3E-41 T 05-07-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AC028_RS02065 f6664ebd7ac1998d6c7e5089b3571ef4 670 Pfam PF10566 Glycoside hydrolase 97 289 558 3.5E-101 T 05-07-2017 IPR019563 Glycosyl-hydrolase 97, catalytic domain AC028_RS02065 f6664ebd7ac1998d6c7e5089b3571ef4 670 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 30 285 4.3E-57 T 05-07-2017 IPR029486 Glycosyl-hydrolase 97, N-terminal domain AC028_RS02065 f6664ebd7ac1998d6c7e5089b3571ef4 670 Gene3D G3DSA:3.20.20.70 315 433 1.3E-8 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS02065 f6664ebd7ac1998d6c7e5089b3571ef4 670 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 561 651 6.1E-31 T 05-07-2017 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain AC028_RS02065 f6664ebd7ac1998d6c7e5089b3571ef4 670 SUPERFAMILY SSF51445 289 511 2.49E-21 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS16050 179014a0c7af3c0ab09879f23349e182 212 Gene3D G3DSA:1.10.10.10 124 203 1.1E-22 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS16050 179014a0c7af3c0ab09879f23349e182 212 Pfam PF00072 Response regulator receiver domain 6 117 2.6E-18 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS16050 179014a0c7af3c0ab09879f23349e182 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.3E-10 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS16050 179014a0c7af3c0ab09879f23349e182 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.3E-10 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS16050 179014a0c7af3c0ab09879f23349e182 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.3E-10 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS16050 179014a0c7af3c0ab09879f23349e182 212 SMART SM00448 4 118 2.7E-18 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS16050 179014a0c7af3c0ab09879f23349e182 212 SMART SM00421 146 203 9.0E-19 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS16050 179014a0c7af3c0ab09879f23349e182 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 2.3E-17 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS16050 179014a0c7af3c0ab09879f23349e182 212 SUPERFAMILY SSF46894 129 204 6.46E-19 T 05-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AC028_RS16050 179014a0c7af3c0ab09879f23349e182 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS16050 179014a0c7af3c0ab09879f23349e182 212 SUPERFAMILY SSF52172 2 150 9.39E-27 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS16050 179014a0c7af3c0ab09879f23349e182 212 Gene3D G3DSA:3.40.50.2300 3 123 1.4E-29 T 05-07-2017 AC028_RS12300 1b72c1db9497daf81f2a1f444fb4a836 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.661 T 05-07-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS12300 1b72c1db9497daf81f2a1f444fb4a836 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 4.5E-36 T 05-07-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS12300 1b72c1db9497daf81f2a1f444fb4a836 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 05-07-2017 IPR006162 Phosphopantetheine attachment site AC028_RS12300 1b72c1db9497daf81f2a1f444fb4a836 79 SUPERFAMILY SSF47336 2 77 1.57E-23 T 05-07-2017 IPR009081 Phosphopantetheine binding ACP domain AC028_RS12300 1b72c1db9497daf81f2a1f444fb4a836 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 8.0E-4 T 05-07-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS12300 1b72c1db9497daf81f2a1f444fb4a836 79 Gene3D G3DSA:1.10.1200.10 3 77 7.5E-36 T 05-07-2017 IPR009081 Phosphopantetheine binding ACP domain AC028_RS12300 1b72c1db9497daf81f2a1f444fb4a836 79 Pfam PF00550 Phosphopantetheine attachment site 6 73 3.4E-16 T 05-07-2017 IPR009081 Phosphopantetheine binding ACP domain AC028_RS08060 96660249b41a0b1f2ffd256a1608dded 223 SUPERFAMILY SSF51366 4 217 1.18E-74 T 05-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AC028_RS08060 96660249b41a0b1f2ffd256a1608dded 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 05-07-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AC028_RS08060 96660249b41a0b1f2ffd256a1608dded 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 05-07-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AC028_RS08060 96660249b41a0b1f2ffd256a1608dded 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.4E-90 T 05-07-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AC028_RS08060 96660249b41a0b1f2ffd256a1608dded 223 Gene3D G3DSA:3.20.20.70 2 220 8.9E-98 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS08060 96660249b41a0b1f2ffd256a1608dded 223 PIRSF PIRSF001461 1 223 1.8E-103 T 05-07-2017 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AC028_RS08060 96660249b41a0b1f2ffd256a1608dded 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 216 2.1E-96 T 05-07-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AC028_RS04150 0777c713b25f942a64b6b65db095ca4b 394 SMART SM00388 166 231 2.0E-15 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS04150 0777c713b25f942a64b6b65db095ca4b 394 SUPERFAMILY SSF55874 220 385 7.99E-30 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS04150 0777c713b25f942a64b6b65db095ca4b 394 Gene3D G3DSA:3.30.565.10 238 385 9.0E-30 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS04150 0777c713b25f942a64b6b65db095ca4b 394 SMART SM00387 275 389 3.4E-24 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS04150 0777c713b25f942a64b6b65db095ca4b 394 Gene3D G3DSA:1.10.287.130 158 227 1.6E-12 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS04150 0777c713b25f942a64b6b65db095ca4b 394 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 344 1.5E-8 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS04150 0777c713b25f942a64b6b65db095ca4b 394 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 330 1.5E-8 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS04150 0777c713b25f942a64b6b65db095ca4b 394 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 366 1.5E-8 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS04150 0777c713b25f942a64b6b65db095ca4b 394 Pfam PF00512 His Kinase A (phospho-acceptor) domain 167 231 3.2E-14 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS04150 0777c713b25f942a64b6b65db095ca4b 394 SMART SM00304 113 165 3.1E-4 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS04150 0777c713b25f942a64b6b65db095ca4b 394 Pfam PF00672 HAMP domain 101 161 9.1E-9 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS04150 0777c713b25f942a64b6b65db095ca4b 394 SUPERFAMILY SSF47384 149 231 4.71E-17 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS04150 0777c713b25f942a64b6b65db095ca4b 394 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 278 384 9.4E-14 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS10275 8289d2c515c87ef048dddc970b19b0b7 425 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 93 411 2.8E-127 T 05-07-2017 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 AC028_RS10275 8289d2c515c87ef048dddc970b19b0b7 425 Gene3D G3DSA:1.20.1250.20 13 222 7.3E-15 T 05-07-2017 AC028_RS10275 8289d2c515c87ef048dddc970b19b0b7 425 Gene3D G3DSA:1.20.1250.20 237 411 2.7E-6 T 05-07-2017 AC028_RS10275 8289d2c515c87ef048dddc970b19b0b7 425 SUPERFAMILY SSF103473 11 414 1.03E-30 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS10275 8289d2c515c87ef048dddc970b19b0b7 425 Pfam PF07690 Major Facilitator Superfamily 18 376 1.4E-13 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS05115 a4b14c4023634ee26c7470e35ae0d988 492 Pfam PF00135 Carboxylesterase family 3 467 3.1E-87 T 05-07-2017 IPR002018 Carboxylesterase, type B AC028_RS05115 a4b14c4023634ee26c7470e35ae0d988 492 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 164 179 - T 05-07-2017 IPR019826 Carboxylesterase type B, active site AC028_RS05115 a4b14c4023634ee26c7470e35ae0d988 492 Gene3D G3DSA:3.40.50.1820 2 479 1.3E-116 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS05115 a4b14c4023634ee26c7470e35ae0d988 492 SUPERFAMILY SSF53474 2 465 1.22E-100 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS05115 a4b14c4023634ee26c7470e35ae0d988 492 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 64 74 - T 05-07-2017 IPR019819 Carboxylesterase type B, conserved site AC028_RS06430 41761ccbe08035bd26ace11dfffae755 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 89 1.4E-9 T 05-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AC028_RS06430 41761ccbe08035bd26ace11dfffae755 326 SUPERFAMILY SSF51735 115 290 1.8E-39 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS06430 41761ccbe08035bd26ace11dfffae755 326 Gene3D G3DSA:3.90.180.10 1 142 6.1E-33 T 05-07-2017 IPR011032 GroES-like AC028_RS06430 41761ccbe08035bd26ace11dfffae755 326 SMART SM00829 11 323 3.3E-6 T 05-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AC028_RS06430 41761ccbe08035bd26ace11dfffae755 326 Gene3D G3DSA:3.40.50.720 143 291 3.5E-38 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS06430 41761ccbe08035bd26ace11dfffae755 326 Pfam PF00107 Zinc-binding dehydrogenase 151 266 1.5E-14 T 05-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AC028_RS06430 41761ccbe08035bd26ace11dfffae755 326 SUPERFAMILY SSF50129 1 144 7.61E-31 T 05-07-2017 IPR011032 GroES-like AC028_RS20205 c407716628402533f768c6d6ec0a3339 293 Gene3D G3DSA:3.60.15.10 1 267 1.4E-32 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS20205 c407716628402533f768c6d6ec0a3339 293 SMART SM00849 33 266 1.2E-14 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS20205 c407716628402533f768c6d6ec0a3339 293 Pfam PF00753 Metallo-beta-lactamase superfamily 34 221 1.3E-18 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS20205 c407716628402533f768c6d6ec0a3339 293 SUPERFAMILY SSF56281 1 269 5.9E-30 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS19970 2b9f3f66e15d9bc4c4b9e10b2b648214 105 Pfam PF01381 Helix-turn-helix 7 60 6.0E-14 T 05-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AC028_RS19970 2b9f3f66e15d9bc4c4b9e10b2b648214 105 SUPERFAMILY SSF47413 1 65 1.32E-16 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS19970 2b9f3f66e15d9bc4c4b9e10b2b648214 105 SMART SM00530 6 61 2.1E-13 T 05-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AC028_RS19970 2b9f3f66e15d9bc4c4b9e10b2b648214 105 Gene3D G3DSA:1.10.260.40 3 81 1.4E-18 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS13095 7a9289ea0864450cc1b114fc30234269 656 Gene3D G3DSA:3.30.565.10 53 257 2.1E-40 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13095 7a9289ea0864450cc1b114fc30234269 656 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 69 196 2.9E-9 T 05-07-2017 AC028_RS13095 7a9289ea0864450cc1b114fc30234269 656 PRINTS PR00775 90kDa heat shock protein signature 222 240 3.3E-14 T 05-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal AC028_RS13095 7a9289ea0864450cc1b114fc30234269 656 PRINTS PR00775 90kDa heat shock protein signature 68 90 3.3E-14 T 05-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal AC028_RS13095 7a9289ea0864450cc1b114fc30234269 656 PRINTS PR00775 90kDa heat shock protein signature 152 174 3.3E-14 T 05-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal AC028_RS13095 7a9289ea0864450cc1b114fc30234269 656 PRINTS PR00775 90kDa heat shock protein signature 204 221 3.3E-14 T 05-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal AC028_RS13095 7a9289ea0864450cc1b114fc30234269 656 Pfam PF00183 Hsp90 protein 312 391 3.4E-8 T 05-07-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AC028_RS13095 7a9289ea0864450cc1b114fc30234269 656 SUPERFAMILY SSF55874 48 242 4.82E-38 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13095 7a9289ea0864450cc1b114fc30234269 656 PIRSF PIRSF002583 24 642 4.1E-103 T 05-07-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AC028_RS13095 7a9289ea0864450cc1b114fc30234269 656 SUPERFAMILY SSF54211 263 492 4.02E-32 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS18605 c83d8b2b3dfbb94a0e214a808b7b509c 392 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 225 356 3.7E-20 T 05-07-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AC028_RS18605 c83d8b2b3dfbb94a0e214a808b7b509c 392 SMART SM00047 207 368 1.0E-38 T 05-07-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AC028_RS18605 c83d8b2b3dfbb94a0e214a808b7b509c 392 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 17 356 1.8E-73 T 05-07-2017 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 AC028_RS18605 c83d8b2b3dfbb94a0e214a808b7b509c 392 PRINTS PR01002 Flagellar protein FlgJ signature 16 39 2.3E-11 T 05-07-2017 AC028_RS18605 c83d8b2b3dfbb94a0e214a808b7b509c 392 PRINTS PR01002 Flagellar protein FlgJ signature 61 83 2.3E-11 T 05-07-2017 AC028_RS18605 c83d8b2b3dfbb94a0e214a808b7b509c 392 Pfam PF10135 Rod binding protein 38 84 3.2E-12 T 05-07-2017 IPR019301 Flagellar protein FlgJ, N-terminal AC028_RS21110 1f8d3b290c26a16fc25bb3e5ed4cd554 549 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 517 530 - T 05-07-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AC028_RS21110 1f8d3b290c26a16fc25bb3e5ed4cd554 549 SUPERFAMILY SSF52540 295 539 4.68E-45 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS21110 1f8d3b290c26a16fc25bb3e5ed4cd554 549 SMART SM00963 249 328 7.8E-19 T 05-07-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AC028_RS21110 1f8d3b290c26a16fc25bb3e5ed4cd554 549 SMART SM00382 342 522 1.8E-5 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS21110 1f8d3b290c26a16fc25bb3e5ed4cd554 549 Pfam PF00448 SRP54-type protein, GTPase domain 343 543 1.4E-72 T 05-07-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AC028_RS21110 1f8d3b290c26a16fc25bb3e5ed4cd554 549 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 271 543 1.3E-99 T 05-07-2017 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AC028_RS21110 1f8d3b290c26a16fc25bb3e5ed4cd554 549 SMART SM00962 343 544 1.5E-109 T 05-07-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AC028_RS21110 1f8d3b290c26a16fc25bb3e5ed4cd554 549 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 271 544 62.675 T 05-07-2017 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AC028_RS21110 1f8d3b290c26a16fc25bb3e5ed4cd554 549 Gene3D G3DSA:3.40.50.300 356 543 3.1E-76 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS21110 1f8d3b290c26a16fc25bb3e5ed4cd554 549 Pfam PF02881 SRP54-type protein, helical bundle domain 260 322 5.5E-11 T 05-07-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AC028_RS21110 1f8d3b290c26a16fc25bb3e5ed4cd554 549 Gene3D G3DSA:1.20.120.140 273 355 3.2E-26 T 05-07-2017 AC028_RS17475 1296db68eaac1e2c5a1fe149d33872b5 302 SUPERFAMILY SSF51569 3 286 1.57E-86 T 05-07-2017 AC028_RS17475 1296db68eaac1e2c5a1fe149d33872b5 302 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 2 287 54.33 T 05-07-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AC028_RS17475 1296db68eaac1e2c5a1fe149d33872b5 302 PIRSF PIRSF001365 2 299 7.4E-82 T 05-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AC028_RS17475 1296db68eaac1e2c5a1fe149d33872b5 302 Pfam PF00701 Dihydrodipicolinate synthetase family 3 284 3.1E-77 T 05-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AC028_RS17475 1296db68eaac1e2c5a1fe149d33872b5 302 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 134 164 - T 05-07-2017 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AC028_RS17475 1296db68eaac1e2c5a1fe149d33872b5 302 Gene3D G3DSA:3.20.20.70 3 287 6.3E-98 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS17475 1296db68eaac1e2c5a1fe149d33872b5 302 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 39 56 - T 05-07-2017 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AC028_RS17475 1296db68eaac1e2c5a1fe149d33872b5 302 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 6 279 2.6E-79 T 05-07-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AC028_RS17475 1296db68eaac1e2c5a1fe149d33872b5 302 SMART SM01130 2 289 8.9E-109 T 05-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AC028_RS17475 1296db68eaac1e2c5a1fe149d33872b5 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 1.7E-26 T 05-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AC028_RS17475 1296db68eaac1e2c5a1fe149d33872b5 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 1.7E-26 T 05-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AC028_RS17475 1296db68eaac1e2c5a1fe149d33872b5 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 1.7E-26 T 05-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AC028_RS17475 1296db68eaac1e2c5a1fe149d33872b5 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 1.7E-26 T 05-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AC028_RS03395 560e0c920dbed3a82011141ae0cf73c0 364 SUPERFAMILY SSF53335 5 68 2.16E-15 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS03395 560e0c920dbed3a82011141ae0cf73c0 364 SUPERFAMILY SSF53335 19 74 9.94E-13 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS03395 560e0c920dbed3a82011141ae0cf73c0 364 SUPERFAMILY SSF53335 202 330 9.94E-13 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS03395 560e0c920dbed3a82011141ae0cf73c0 364 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 11 28 8.2E-6 T 05-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AC028_RS03395 560e0c920dbed3a82011141ae0cf73c0 364 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 30 48 8.2E-6 T 05-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AC028_RS03395 560e0c920dbed3a82011141ae0cf73c0 364 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 53 73 8.2E-6 T 05-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AC028_RS03395 560e0c920dbed3a82011141ae0cf73c0 364 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 231 236 - T 05-07-2017 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 KEGG: 00860+2.1.1.11|MetaCyc: PWY-5531|MetaCyc: PWY-7159 AC028_RS03395 560e0c920dbed3a82011141ae0cf73c0 364 Gene3D G3DSA:3.40.50.150 11 70 3.2E-12 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS03395 560e0c920dbed3a82011141ae0cf73c0 364 Gene3D G3DSA:3.40.50.150 210 305 2.0E-10 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS03395 560e0c920dbed3a82011141ae0cf73c0 364 Pfam PF01555 DNA methylase 227 307 3.3E-6 T 05-07-2017 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AC028_RS03395 560e0c920dbed3a82011141ae0cf73c0 364 Pfam PF01555 DNA methylase 11 63 4.3E-11 T 05-07-2017 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AC028_RS04530 ff828d5e3ef4cfdae417cf0119fe1b8e 229 Pfam PF00043 Glutathione S-transferase, C-terminal domain 132 197 9.0E-13 T 05-07-2017 IPR004046 Glutathione S-transferase, C-terminal AC028_RS04530 ff828d5e3ef4cfdae417cf0119fe1b8e 229 SUPERFAMILY SSF47616 78 206 1.36E-35 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS04530 ff828d5e3ef4cfdae417cf0119fe1b8e 229 Gene3D G3DSA:1.20.1050.10 84 201 1.2E-47 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS04530 ff828d5e3ef4cfdae417cf0119fe1b8e 229 SUPERFAMILY SSF52833 1 84 3.25E-22 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS04530 ff828d5e3ef4cfdae417cf0119fe1b8e 229 Gene3D G3DSA:3.40.30.10 1 83 2.6E-27 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS04530 ff828d5e3ef4cfdae417cf0119fe1b8e 229 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 81 1.5E-14 T 05-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AC028_RS21515 0e7a0051127544ed742e7c5bb31d1ac9 350 PIRSF PIRSF028415 1 350 4.5E-217 T 05-07-2017 IPR014545 Uncharacterised conserved protein UCP028415 AC028_RS21515 0e7a0051127544ed742e7c5bb31d1ac9 350 Pfam PF10030 Uncharacterized protein conserved in bacteria (DUF2272) 78 300 7.4E-102 T 05-07-2017 IPR019262 Domain of unknown function DUF2272 AC028_RS09900 82dea52c3a2ce2577d17c47d5285f958 455 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 6 455 44.079 T 05-07-2017 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AC028_RS09900 82dea52c3a2ce2577d17c47d5285f958 455 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 9 455 1.8E-204 T 05-07-2017 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AC028_RS09900 82dea52c3a2ce2577d17c47d5285f958 455 Pfam PF07724 AAA domain (Cdc48 subfamily) 195 341 1.4E-40 T 05-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AC028_RS09900 82dea52c3a2ce2577d17c47d5285f958 455 Gene3D G3DSA:1.10.8.60 347 455 5.6E-36 T 05-07-2017 AC028_RS09900 82dea52c3a2ce2577d17c47d5285f958 455 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 58 109 1.7E-6 T 05-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AC028_RS09900 82dea52c3a2ce2577d17c47d5285f958 455 SMART SM01086 347 446 6.5E-24 T 05-07-2017 IPR019489 Clp ATPase, C-terminal AC028_RS09900 82dea52c3a2ce2577d17c47d5285f958 455 SUPERFAMILY SSF52540 8 453 3.25E-90 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS09900 82dea52c3a2ce2577d17c47d5285f958 455 Gene3D G3DSA:3.40.50.300 9 115 1.9E-51 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS09900 82dea52c3a2ce2577d17c47d5285f958 455 Gene3D G3DSA:3.40.50.300 255 343 1.9E-51 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS09900 82dea52c3a2ce2577d17c47d5285f958 455 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 347 415 3.5E-6 T 05-07-2017 IPR019489 Clp ATPase, C-terminal AC028_RS09900 82dea52c3a2ce2577d17c47d5285f958 455 SMART SM00382 54 344 1.2E-10 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS09900 82dea52c3a2ce2577d17c47d5285f958 455 Gene3D G3DSA:1.10.8.10 223 253 6.0E-29 T 05-07-2017 AC028_RS09900 82dea52c3a2ce2577d17c47d5285f958 455 Gene3D G3DSA:1.10.8.10 116 188 6.0E-29 T 05-07-2017 AC028_RS11895 9e76a9ac2eaca92473c0f905432891eb 317 SUPERFAMILY SSF161098 33 300 5.14E-52 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS11895 9e76a9ac2eaca92473c0f905432891eb 317 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 34 306 6.6E-87 T 05-07-2017 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AC028_RS11895 9e76a9ac2eaca92473c0f905432891eb 317 Gene3D G3DSA:1.10.3720.10 37 306 9.1E-48 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS11895 9e76a9ac2eaca92473c0f905432891eb 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 304 4.2E-15 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS11895 9e76a9ac2eaca92473c0f905432891eb 317 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 35 308 1.1E-119 T 05-07-2017 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 AC028_RS05180 a204c990062a40b6c544aadfff82816a 363 SUPERFAMILY SSF51182 256 361 8.91E-21 T 05-07-2017 IPR011051 RmlC-like cupin domain AC028_RS05180 a204c990062a40b6c544aadfff82816a 363 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 19 206 9.6E-18 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS05180 a204c990062a40b6c544aadfff82816a 363 Gene3D G3DSA:3.40.50.1110 15 231 4.4E-74 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS05180 a204c990062a40b6c544aadfff82816a 363 SUPERFAMILY SSF52266 15 228 2.33E-54 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS05180 a204c990062a40b6c544aadfff82816a 363 Pfam PF07883 Cupin domain 294 358 1.7E-15 T 05-07-2017 IPR013096 Cupin 2, conserved barrel AC028_RS05180 a204c990062a40b6c544aadfff82816a 363 Gene3D G3DSA:2.60.120.10 276 360 1.3E-20 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS02185 5eefa0ae77bebf499b2f7883b0a1024a 573 SUPERFAMILY SSF55124 339 415 7.2E-18 T 05-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AC028_RS02185 5eefa0ae77bebf499b2f7883b0a1024a 573 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 473 489 - T 05-07-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AC028_RS02185 5eefa0ae77bebf499b2f7883b0a1024a 573 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 2 571 55.867 T 05-07-2017 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AC028_RS02185 5eefa0ae77bebf499b2f7883b0a1024a 573 PRINTS PR00397 Sirohaem Fe-binding site signature 473 491 1.5E-8 T 05-07-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AC028_RS02185 5eefa0ae77bebf499b2f7883b0a1024a 573 PRINTS PR00397 Sirohaem Fe-binding site signature 425 443 1.5E-8 T 05-07-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AC028_RS02185 5eefa0ae77bebf499b2f7883b0a1024a 573 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 427 555 0.053 T 05-07-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AC028_RS02185 5eefa0ae77bebf499b2f7883b0a1024a 573 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 167 321 5.5E-41 T 05-07-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AC028_RS02185 5eefa0ae77bebf499b2f7883b0a1024a 573 SUPERFAMILY SSF55124 7 139 4.91E-30 T 05-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AC028_RS02185 5eefa0ae77bebf499b2f7883b0a1024a 573 SUPERFAMILY SSF56014 140 337 5.5E-53 T 05-07-2017 AC028_RS02185 5eefa0ae77bebf499b2f7883b0a1024a 573 Gene3D G3DSA:3.90.480.10 335 414 6.5E-57 T 05-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AC028_RS02185 5eefa0ae77bebf499b2f7883b0a1024a 573 Gene3D G3DSA:3.90.480.10 66 137 6.5E-57 T 05-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AC028_RS02185 5eefa0ae77bebf499b2f7883b0a1024a 573 Gene3D G3DSA:3.30.413.10 140 332 4.9E-62 T 05-07-2017 AC028_RS02185 5eefa0ae77bebf499b2f7883b0a1024a 573 Gene3D G3DSA:3.30.413.10 427 555 2.0E-34 T 05-07-2017 AC028_RS02185 5eefa0ae77bebf499b2f7883b0a1024a 573 SUPERFAMILY SSF56014 424 557 1.83E-32 T 05-07-2017 AC028_RS02185 5eefa0ae77bebf499b2f7883b0a1024a 573 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 345 409 3.6E-13 T 05-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AC028_RS02185 5eefa0ae77bebf499b2f7883b0a1024a 573 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 68 130 6.0E-16 T 05-07-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AC028_RS02185 5eefa0ae77bebf499b2f7883b0a1024a 573 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 11 556 3.8E-267 T 05-07-2017 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AC028_RS13345 e9a989a8de563d77c6d20531037cac59 897 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 65 897 7.3E-208 T 05-07-2017 IPR010104 Bacterial TonB-dependent receptor AC028_RS13345 e9a989a8de563d77c6d20531037cac59 897 Pfam PF00593 TonB dependent receptor 623 896 2.5E-23 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS13345 e9a989a8de563d77c6d20531037cac59 897 Pfam PF07715 TonB-dependent Receptor Plug Domain 84 183 1.5E-12 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS13345 e9a989a8de563d77c6d20531037cac59 897 SUPERFAMILY SSF56935 532 897 2.34E-72 T 05-07-2017 AC028_RS13345 e9a989a8de563d77c6d20531037cac59 897 SUPERFAMILY SSF56935 294 502 2.34E-72 T 05-07-2017 AC028_RS13345 e9a989a8de563d77c6d20531037cac59 897 SUPERFAMILY SSF56935 60 259 2.34E-72 T 05-07-2017 AC028_RS13345 e9a989a8de563d77c6d20531037cac59 897 Gene3D G3DSA:2.40.170.20 562 897 3.3E-52 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS13345 e9a989a8de563d77c6d20531037cac59 897 Gene3D G3DSA:2.40.170.20 188 525 3.3E-52 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS13345 e9a989a8de563d77c6d20531037cac59 897 Gene3D G3DSA:2.170.130.10 68 187 8.5E-14 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS19740 9e443a4cfcbd1b4e078edf4d5e101d21 103 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.005 T 05-07-2017 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AC028_RS19740 9e443a4cfcbd1b4e078edf4d5e101d21 103 SUPERFAMILY SSF47729 1 91 3.53E-30 T 05-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AC028_RS19740 9e443a4cfcbd1b4e078edf4d5e101d21 103 SMART SM00411 1 91 1.3E-39 T 05-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AC028_RS19740 9e443a4cfcbd1b4e078edf4d5e101d21 103 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 1.6E-42 T 05-07-2017 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AC028_RS19740 9e443a4cfcbd1b4e078edf4d5e101d21 103 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.1E-28 T 05-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AC028_RS19740 9e443a4cfcbd1b4e078edf4d5e101d21 103 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.3E-18 T 05-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AC028_RS19740 9e443a4cfcbd1b4e078edf4d5e101d21 103 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.3E-18 T 05-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AC028_RS19740 9e443a4cfcbd1b4e078edf4d5e101d21 103 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.3E-18 T 05-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AC028_RS19740 9e443a4cfcbd1b4e078edf4d5e101d21 103 Gene3D G3DSA:4.10.520.10 1 91 1.6E-32 T 05-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AC028_RS19740 9e443a4cfcbd1b4e078edf4d5e101d21 103 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 05-07-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AC028_RS12975 bae93b31e7ab03d4d8c6ee8756728bbc 988 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 941 22.537 T 05-07-2017 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AC028_RS12975 bae93b31e7ab03d4d8c6ee8756728bbc 988 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS12975 bae93b31e7ab03d4d8c6ee8756728bbc 988 SUPERFAMILY SSF52540 616 915 6.52E-53 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12975 bae93b31e7ab03d4d8c6ee8756728bbc 988 Pfam PF00005 ABC transporter 625 861 3.7E-10 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS12975 bae93b31e7ab03d4d8c6ee8756728bbc 988 ProSitePatterns PS00211 ABC transporters family signature. 831 845 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS12975 bae93b31e7ab03d4d8c6ee8756728bbc 988 Gene3D G3DSA:1.20.1580.10 695 821 2.3E-54 T 05-07-2017 AC028_RS12975 bae93b31e7ab03d4d8c6ee8756728bbc 988 SUPERFAMILY SSF52540 3 206 8.43E-48 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12975 bae93b31e7ab03d4d8c6ee8756728bbc 988 SUPERFAMILY SSF52540 432 571 8.43E-48 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12975 bae93b31e7ab03d4d8c6ee8756728bbc 988 Gene3D G3DSA:1.10.8.280 289 408 3.9E-41 T 05-07-2017 AC028_RS12975 bae93b31e7ab03d4d8c6ee8756728bbc 988 Gene3D G3DSA:3.40.50.300 603 673 1.7E-60 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12975 bae93b31e7ab03d4d8c6ee8756728bbc 988 Gene3D G3DSA:3.40.50.300 822 942 1.7E-60 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12975 bae93b31e7ab03d4d8c6ee8756728bbc 988 Gene3D G3DSA:3.40.50.300 480 598 1.8E-55 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12975 bae93b31e7ab03d4d8c6ee8756728bbc 988 Gene3D G3DSA:3.40.50.300 6 53 1.8E-55 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12975 bae93b31e7ab03d4d8c6ee8756728bbc 988 Gene3D G3DSA:3.30.1490.20 132 155 9.6E-24 T 05-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AC028_RS12975 bae93b31e7ab03d4d8c6ee8756728bbc 988 Gene3D G3DSA:3.30.1490.20 202 250 9.6E-24 T 05-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AC028_RS12975 bae93b31e7ab03d4d8c6ee8756728bbc 988 Gene3D G3DSA:1.20.1580.10 93 131 5.5E-51 T 05-07-2017 AC028_RS12975 bae93b31e7ab03d4d8c6ee8756728bbc 988 Gene3D G3DSA:1.20.1580.10 253 286 5.5E-51 T 05-07-2017 AC028_RS12975 bae93b31e7ab03d4d8c6ee8756728bbc 988 Gene3D G3DSA:1.20.1580.10 409 479 5.5E-51 T 05-07-2017 AC028_RS12975 bae93b31e7ab03d4d8c6ee8756728bbc 988 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 926 0.0 T 05-07-2017 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AC028_RS21090 1517272035628f7148dccd3be072ddd5 81 SUPERFAMILY SSF54292 5 80 7.21E-19 T 05-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AC028_RS21090 1517272035628f7148dccd3be072ddd5 81 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 80 3.9E-22 T 05-07-2017 AC028_RS21090 1517272035628f7148dccd3be072ddd5 81 Gene3D G3DSA:3.10.20.30 6 71 5.3E-6 T 05-07-2017 IPR012675 Beta-grasp domain AC028_RS21020 26e0dd128685de9a94c4f79bd9cdd7e8 940 SUPERFAMILY SSF56935 675 940 2.98E-82 T 05-07-2017 AC028_RS21020 26e0dd128685de9a94c4f79bd9cdd7e8 940 SUPERFAMILY SSF56935 52 247 2.98E-82 T 05-07-2017 AC028_RS21020 26e0dd128685de9a94c4f79bd9cdd7e8 940 SUPERFAMILY SSF56935 312 442 2.98E-82 T 05-07-2017 AC028_RS21020 26e0dd128685de9a94c4f79bd9cdd7e8 940 SUPERFAMILY SSF56935 485 642 2.98E-82 T 05-07-2017 AC028_RS21020 26e0dd128685de9a94c4f79bd9cdd7e8 940 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 182 6.3E-23 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS21020 26e0dd128685de9a94c4f79bd9cdd7e8 940 Pfam PF00593 TonB dependent receptor 600 938 7.8E-21 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21020 26e0dd128685de9a94c4f79bd9cdd7e8 940 Gene3D G3DSA:2.40.170.20 311 422 1.6E-65 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21020 26e0dd128685de9a94c4f79bd9cdd7e8 940 Gene3D G3DSA:2.40.170.20 468 940 1.6E-65 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21020 26e0dd128685de9a94c4f79bd9cdd7e8 940 Gene3D G3DSA:2.40.170.20 186 254 1.6E-65 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21020 26e0dd128685de9a94c4f79bd9cdd7e8 940 Gene3D G3DSA:2.170.130.10 67 185 8.4E-34 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS04250 326b14514b01c5c1d6805f484d5d87c1 229 SMART SM00382 33 221 3.5E-17 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS04250 326b14514b01c5c1d6805f484d5d87c1 229 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS04250 326b14514b01c5c1d6805f484d5d87c1 229 Pfam PF00005 ABC transporter 24 172 5.9E-34 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS04250 326b14514b01c5c1d6805f484d5d87c1 229 SUPERFAMILY SSF52540 4 224 1.86E-70 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS04250 326b14514b01c5c1d6805f484d5d87c1 229 Gene3D G3DSA:3.40.50.300 4 223 7.6E-71 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS15505 ffe16f661a8fcf14569dd8a5b1526439 258 Gene3D G3DSA:3.90.230.10 5 253 6.2E-102 T 05-07-2017 IPR000994 Peptidase M24, structural domain AC028_RS15505 ffe16f661a8fcf14569dd8a5b1526439 258 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 250 8.9E-100 T 05-07-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AC028_RS15505 ffe16f661a8fcf14569dd8a5b1526439 258 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 42.329 T 05-07-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AC028_RS15505 ffe16f661a8fcf14569dd8a5b1526439 258 SUPERFAMILY SSF55920 5 250 9.81E-96 T 05-07-2017 IPR000994 Peptidase M24, structural domain AC028_RS15505 ffe16f661a8fcf14569dd8a5b1526439 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 4.7E-23 T 05-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase AC028_RS15505 ffe16f661a8fcf14569dd8a5b1526439 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 4.7E-23 T 05-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase AC028_RS15505 ffe16f661a8fcf14569dd8a5b1526439 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 4.7E-23 T 05-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase AC028_RS15505 ffe16f661a8fcf14569dd8a5b1526439 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 4.7E-23 T 05-07-2017 IPR001714 Peptidase M24, methionine aminopeptidase AC028_RS15505 ffe16f661a8fcf14569dd8a5b1526439 258 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 05-07-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AC028_RS15505 ffe16f661a8fcf14569dd8a5b1526439 258 Pfam PF00557 Metallopeptidase family M24 12 242 7.5E-56 T 05-07-2017 IPR000994 Peptidase M24, structural domain AC028_RS05640 197045de30d15663bc1ca9f9009e45d0 210 Gene3D G3DSA:1.10.10.60 12 69 2.2E-23 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS05640 197045de30d15663bc1ca9f9009e45d0 210 Gene3D G3DSA:1.10.357.10 72 209 7.6E-53 T 05-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AC028_RS05640 197045de30d15663bc1ca9f9009e45d0 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 8.6E-19 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS05640 197045de30d15663bc1ca9f9009e45d0 210 SUPERFAMILY SSF46689 10 89 2.89E-21 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS05640 197045de30d15663bc1ca9f9009e45d0 210 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 153 207 4.1E-19 T 05-07-2017 AC028_RS05640 197045de30d15663bc1ca9f9009e45d0 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 9.4E-9 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS05640 197045de30d15663bc1ca9f9009e45d0 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 9.4E-9 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS05640 197045de30d15663bc1ca9f9009e45d0 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 34 64 - T 05-07-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AC028_RS05640 197045de30d15663bc1ca9f9009e45d0 210 SUPERFAMILY SSF48498 94 207 4.45E-12 T 05-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AC028_RS12070 fb0a8139df2c5be73e23bd429d461959 430 SUPERFAMILY SSF54534 128 242 8.35E-17 T 05-07-2017 AC028_RS12070 fb0a8139df2c5be73e23bd429d461959 430 Gene3D G3DSA:1.10.3120.10 200 388 5.3E-45 T 05-07-2017 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AC028_RS12070 fb0a8139df2c5be73e23bd429d461959 430 PIRSF PIRSF003095 1 428 1.6E-103 T 05-07-2017 IPR005215 Trigger factor GO:0015031 AC028_RS12070 fb0a8139df2c5be73e23bd429d461959 430 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 260 413 2.9E-36 T 05-07-2017 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AC028_RS12070 fb0a8139df2c5be73e23bd429d461959 430 SUPERFAMILY SSF109998 244 428 7.32E-38 T 05-07-2017 IPR027304 Trigger factor/SurA domain AC028_RS12070 fb0a8139df2c5be73e23bd429d461959 430 SUPERFAMILY SSF102735 1 125 1.02E-30 T 05-07-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AC028_RS12070 fb0a8139df2c5be73e23bd429d461959 430 Hamap MF_00303 Trigger factor [tig]. 1 418 17.474 T 05-07-2017 IPR005215 Trigger factor GO:0015031 AC028_RS12070 fb0a8139df2c5be73e23bd429d461959 430 TIGRFAM TIGR00115 tig: trigger factor 11 411 3.8E-108 T 05-07-2017 IPR005215 Trigger factor GO:0015031 AC028_RS12070 fb0a8139df2c5be73e23bd429d461959 430 Pfam PF05697 Bacterial trigger factor protein (TF) 1 140 3.2E-35 T 05-07-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AC028_RS12070 fb0a8139df2c5be73e23bd429d461959 430 Gene3D G3DSA:3.30.70.1050 1 111 6.6E-31 T 05-07-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AC028_RS13465 b28616c79c7664904db7917eb4d185a7 155 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 10 154 32.568 T 05-07-2017 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|Reactome: R-HSA-500753 AC028_RS13465 b28616c79c7664904db7917eb4d185a7 155 SUPERFAMILY SSF51283 9 154 1.57E-48 T 05-07-2017 IPR029054 dUTPase-like AC028_RS13465 b28616c79c7664904db7917eb4d185a7 155 TIGRFAM TIGR00576 dut: dUTP diphosphatase 21 153 3.0E-44 T 05-07-2017 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|Reactome: R-HSA-500753 AC028_RS13465 b28616c79c7664904db7917eb4d185a7 155 Gene3D G3DSA:2.70.40.10 11 154 7.0E-48 T 05-07-2017 IPR029054 dUTPase-like AC028_RS13465 b28616c79c7664904db7917eb4d185a7 155 Pfam PF00692 dUTPase 21 153 3.1E-33 T 05-07-2017 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 AC028_RS11415 ef237f50bc122ad07840539c8d66d528 361 SUPERFAMILY SSF56752 12 357 3.66E-114 T 05-07-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AC028_RS11415 ef237f50bc122ad07840539c8d66d528 361 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 47 360 3.7E-142 T 05-07-2017 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: R-HSA-70895 AC028_RS11415 ef237f50bc122ad07840539c8d66d528 361 PIRSF PIRSF006468 4 361 3.5E-134 T 05-07-2017 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: R-HSA-70895 AC028_RS11415 ef237f50bc122ad07840539c8d66d528 361 Gene3D G3DSA:3.30.470.10 18 177 4.1E-68 T 05-07-2017 AC028_RS11415 ef237f50bc122ad07840539c8d66d528 361 Pfam PF01063 Amino-transferase class IV 73 316 1.3E-34 T 05-07-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AC028_RS11415 ef237f50bc122ad07840539c8d66d528 361 Gene3D G3DSA:3.20.10.10 178 347 1.5E-69 T 05-07-2017 AC028_RS11415 ef237f50bc122ad07840539c8d66d528 361 ProSitePatterns PS00770 Aminotransferases class-IV signature. 236 266 - T 05-07-2017 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 AC028_RS16265 7867338ffa9c4b7a0e964f5755ea55cd 404 SUPERFAMILY SSF52777 174 402 1.11E-88 T 05-07-2017 AC028_RS16265 7867338ffa9c4b7a0e964f5755ea55cd 404 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 403 3.4E-177 T 05-07-2017 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AC028_RS16265 7867338ffa9c4b7a0e964f5755ea55cd 404 Pfam PF00364 Biotin-requiring enzyme 4 76 5.5E-19 T 05-07-2017 IPR000089 Biotin/lipoyl attachment AC028_RS16265 7867338ffa9c4b7a0e964f5755ea55cd 404 SUPERFAMILY SSF51230 1 95 7.72E-26 T 05-07-2017 IPR011053 Single hybrid motif AC028_RS16265 7867338ffa9c4b7a0e964f5755ea55cd 404 Gene3D G3DSA:4.10.320.10 127 165 2.3E-10 T 05-07-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AC028_RS16265 7867338ffa9c4b7a0e964f5755ea55cd 404 SUPERFAMILY SSF47005 118 162 3.14E-8 T 05-07-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AC028_RS16265 7867338ffa9c4b7a0e964f5755ea55cd 404 Gene3D G3DSA:2.40.50.100 1 96 9.6E-27 T 05-07-2017 AC028_RS16265 7867338ffa9c4b7a0e964f5755ea55cd 404 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 174 401 1.8E-83 T 05-07-2017 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AC028_RS16265 7867338ffa9c4b7a0e964f5755ea55cd 404 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 05-07-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AC028_RS16265 7867338ffa9c4b7a0e964f5755ea55cd 404 Pfam PF02817 e3 binding domain 127 157 1.3E-6 T 05-07-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AC028_RS16265 7867338ffa9c4b7a0e964f5755ea55cd 404 Gene3D G3DSA:3.30.559.10 169 401 4.2E-94 T 05-07-2017 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 AC028_RS00600 6681f89ce587bdbaa32d8113fce6c03b 254 Pfam PF00196 Bacterial regulatory proteins, luxR family 192 244 6.8E-18 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS00600 6681f89ce587bdbaa32d8113fce6c03b 254 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 222 234 4.5E-9 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS00600 6681f89ce587bdbaa32d8113fce6c03b 254 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 206 4.5E-9 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS00600 6681f89ce587bdbaa32d8113fce6c03b 254 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 206 222 4.5E-9 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS00600 6681f89ce587bdbaa32d8113fce6c03b 254 ProSitePatterns PS00622 LuxR-type HTH domain signature. 206 233 - T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS00600 6681f89ce587bdbaa32d8113fce6c03b 254 SUPERFAMILY SSF75516 3 183 2.35E-31 T 05-07-2017 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AC028_RS00600 6681f89ce587bdbaa32d8113fce6c03b 254 SMART SM00421 189 246 3.4E-18 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS00600 6681f89ce587bdbaa32d8113fce6c03b 254 SUPERFAMILY SSF46894 176 252 5.44E-19 T 05-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AC028_RS00600 6681f89ce587bdbaa32d8113fce6c03b 254 Gene3D G3DSA:3.30.450.80 1 186 4.5E-37 T 05-07-2017 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AC028_RS00600 6681f89ce587bdbaa32d8113fce6c03b 254 Pfam PF03472 Autoinducer binding domain 23 175 2.2E-23 T 05-07-2017 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AC028_RS00600 6681f89ce587bdbaa32d8113fce6c03b 254 Gene3D G3DSA:1.10.10.10 187 253 1.0E-19 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS12385 524775f354781d4f712074840ae910d0 1640 Gene3D G3DSA:1.50.10.20 1155 1412 6.5E-22 T 05-07-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid AC028_RS12385 524775f354781d4f712074840ae910d0 1640 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 286 380 4.7E-23 T 05-07-2017 IPR021868 Alpha-2-macroglobulin MG1 domain AC028_RS12385 524775f354781d4f712074840ae910d0 1640 SMART SM01360 953 1042 2.0E-23 T 05-07-2017 IPR001599 Alpha-2-macroglobulin GO:0004866 AC028_RS12385 524775f354781d4f712074840ae910d0 1640 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 747 889 5.0E-13 T 05-07-2017 IPR011625 Alpha-2-macroglobulin, N-terminal 2 AC028_RS12385 524775f354781d4f712074840ae910d0 1640 Pfam PF01835 MG2 domain 386 473 3.6E-19 T 05-07-2017 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 AC028_RS12385 524775f354781d4f712074840ae910d0 1640 PIRSF PIRSF038980 17 1639 0.0 T 05-07-2017 IPR026284 Alpha-2-macroglobulin domain protein, bacteria AC028_RS12385 524775f354781d4f712074840ae910d0 1640 SMART SM01359 746 889 2.8E-32 T 05-07-2017 IPR011625 Alpha-2-macroglobulin, N-terminal 2 AC028_RS12385 524775f354781d4f712074840ae910d0 1640 SUPERFAMILY SSF48239 1153 1412 1.41E-29 T 05-07-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid AC028_RS12385 524775f354781d4f712074840ae910d0 1640 Pfam PF00207 Alpha-2-macroglobulin family 956 1041 2.4E-7 T 05-07-2017 IPR001599 Alpha-2-macroglobulin GO:0004866 AC028_RS21070 3a5e0b6e2fd0ab1fa1296dc7a4cdb343 399 Gene3D G3DSA:3.40.350.10 17 164 1.5E-22 T 05-07-2017 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AC028_RS21070 3a5e0b6e2fd0ab1fa1296dc7a4cdb343 399 SUPERFAMILY SSF53092 16 165 1.74E-24 T 05-07-2017 IPR028980 Creatinase/Aminopeptidase P, N-terminal AC028_RS21070 3a5e0b6e2fd0ab1fa1296dc7a4cdb343 399 Pfam PF00557 Metallopeptidase family M24 174 381 1.7E-49 T 05-07-2017 IPR000994 Peptidase M24, structural domain AC028_RS21070 3a5e0b6e2fd0ab1fa1296dc7a4cdb343 399 Gene3D G3DSA:3.90.230.10 165 390 4.7E-64 T 05-07-2017 IPR000994 Peptidase M24, structural domain AC028_RS21070 3a5e0b6e2fd0ab1fa1296dc7a4cdb343 399 Pfam PF01321 Creatinase/Prolidase N-terminal domain 35 166 4.5E-16 T 05-07-2017 IPR000587 Creatinase, N-terminal GO:0016787 AC028_RS21070 3a5e0b6e2fd0ab1fa1296dc7a4cdb343 399 SUPERFAMILY SSF55920 165 391 7.2E-67 T 05-07-2017 IPR000994 Peptidase M24, structural domain AC028_RS10655 b6ad8780d01465839596e6ec6cccf4a7 411 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 8.9E-29 T 05-07-2017 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AC028_RS10655 b6ad8780d01465839596e6ec6cccf4a7 411 Gene3D G3DSA:3.30.420.40 3 83 7.2E-24 T 05-07-2017 AC028_RS10655 b6ad8780d01465839596e6ec6cccf4a7 411 Gene3D G3DSA:3.30.420.40 158 209 7.2E-24 T 05-07-2017 AC028_RS10655 b6ad8780d01465839596e6ec6cccf4a7 411 SUPERFAMILY SSF53067 200 378 1.3E-45 T 05-07-2017 AC028_RS10655 b6ad8780d01465839596e6ec6cccf4a7 411 PIRSF PIRSF003101 1 411 2.8E-150 T 05-07-2017 IPR020823 Cell division protein FtsA GO:0007049 AC028_RS10655 b6ad8780d01465839596e6ec6cccf4a7 411 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 2.7E-160 T 05-07-2017 IPR020823 Cell division protein FtsA GO:0007049 AC028_RS10655 b6ad8780d01465839596e6ec6cccf4a7 411 SUPERFAMILY SSF53067 9 198 5.89E-61 T 05-07-2017 AC028_RS10655 b6ad8780d01465839596e6ec6cccf4a7 411 Gene3D G3DSA:3.30.420.40 299 353 1.6E-33 T 05-07-2017 AC028_RS10655 b6ad8780d01465839596e6ec6cccf4a7 411 Gene3D G3DSA:3.30.420.40 210 235 1.6E-33 T 05-07-2017 AC028_RS10655 b6ad8780d01465839596e6ec6cccf4a7 411 Gene3D G3DSA:3.30.1490.110 95 157 1.5E-15 T 05-07-2017 AC028_RS10655 b6ad8780d01465839596e6ec6cccf4a7 411 Gene3D G3DSA:3.90.640.10 236 298 2.6E-19 T 05-07-2017 AC028_RS10655 b6ad8780d01465839596e6ec6cccf4a7 411 Pfam PF14450 Cell division protein FtsA 11 195 3.9E-11 T 05-07-2017 AC028_RS10655 b6ad8780d01465839596e6ec6cccf4a7 411 Pfam PF14450 Cell division protein FtsA 208 375 6.6E-24 T 05-07-2017 AC028_RS10655 b6ad8780d01465839596e6ec6cccf4a7 411 SMART SM00842 10 197 7.8E-104 T 05-07-2017 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AC028_RS10655 b6ad8780d01465839596e6ec6cccf4a7 411 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 411 30.631 T 05-07-2017 IPR020823 Cell division protein FtsA GO:0007049 AC028_RS15555 ec4fe61fb8c3e38f894ad1f6206428d9 218 PIRSF PIRSF023956 1 218 1.9E-73 T 05-07-2017 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 AC028_RS15555 ec4fe61fb8c3e38f894ad1f6206428d9 218 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 217 1.8E-82 T 05-07-2017 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 AC028_RS15555 ec4fe61fb8c3e38f894ad1f6206428d9 218 Gene3D G3DSA:3.40.50.150 16 217 9.7E-61 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS15555 ec4fe61fb8c3e38f894ad1f6206428d9 218 SUPERFAMILY SSF53335 1 217 3.33E-53 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS15555 ec4fe61fb8c3e38f894ad1f6206428d9 218 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 217 38.716 T 05-07-2017 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 AC028_RS15555 ec4fe61fb8c3e38f894ad1f6206428d9 218 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 216 3.7E-83 T 05-07-2017 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 AC028_RS12530 f8d9a636399ebd299835224b99ffd1ff 500 Pfam PF01420 Type I restriction modification DNA specificity domain 165 267 4.0E-6 T 05-07-2017 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AC028_RS12530 f8d9a636399ebd299835224b99ffd1ff 500 SUPERFAMILY SSF116734 284 493 8.83E-25 T 05-07-2017 AC028_RS12530 f8d9a636399ebd299835224b99ffd1ff 500 Pfam PF01909 Nucleotidyltransferase domain 17 98 5.0E-9 T 05-07-2017 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AC028_RS12530 f8d9a636399ebd299835224b99ffd1ff 500 Gene3D G3DSA:3.30.460.10 5 104 4.1E-26 T 05-07-2017 AC028_RS12530 f8d9a636399ebd299835224b99ffd1ff 500 SUPERFAMILY SSF81301 8 101 1.1E-17 T 05-07-2017 AC028_RS12530 f8d9a636399ebd299835224b99ffd1ff 500 SUPERFAMILY SSF116734 114 281 2.78E-26 T 05-07-2017 AC028_RS03155 f75c712ecfe8d209fa9152a1474a1896 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 68 4.7E-18 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS03155 f75c712ecfe8d209fa9152a1474a1896 242 SMART SM00345 9 68 3.8E-18 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS03155 f75c712ecfe8d209fa9152a1474a1896 242 Pfam PF07702 UTRA domain 89 227 6.9E-28 T 05-07-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AC028_RS03155 f75c712ecfe8d209fa9152a1474a1896 242 SUPERFAMILY SSF46785 3 72 2.47E-19 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS03155 f75c712ecfe8d209fa9152a1474a1896 242 SUPERFAMILY SSF64288 56 233 1.18E-37 T 05-07-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AC028_RS03155 f75c712ecfe8d209fa9152a1474a1896 242 Gene3D G3DSA:1.10.10.10 5 64 3.7E-22 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS03155 f75c712ecfe8d209fa9152a1474a1896 242 Gene3D G3DSA:3.40.1410.10 65 232 1.6E-36 T 05-07-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AC028_RS03155 f75c712ecfe8d209fa9152a1474a1896 242 SMART SM00866 89 229 3.2E-31 T 05-07-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AC028_RS03155 f75c712ecfe8d209fa9152a1474a1896 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.0E-8 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS03155 f75c712ecfe8d209fa9152a1474a1896 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.0E-8 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS14040 2b6cffc3629d6ea9da2eb6665fef1d22 352 Gene3D G3DSA:3.40.50.2000 215 314 8.0E-6 T 05-07-2017 AC028_RS14040 2b6cffc3629d6ea9da2eb6665fef1d22 352 SUPERFAMILY SSF53756 8 319 2.09E-33 T 05-07-2017 AC028_RS14040 2b6cffc3629d6ea9da2eb6665fef1d22 352 PIRSF PIRSF028458 1 352 1.1E-184 T 05-07-2017 IPR016886 Predicted glycerophosphotransferase UCP028458 AC028_RS14040 2b6cffc3629d6ea9da2eb6665fef1d22 352 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 129 312 7.3E-8 T 05-07-2017 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 AC028_RS00720 b8c42cf9a63f9458ab1d78423b65ac25 148 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 4 142 1.1E-66 T 05-07-2017 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 AC028_RS00720 b8c42cf9a63f9458ab1d78423b65ac25 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 6 17 2.8E-13 T 05-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AC028_RS00720 b8c42cf9a63f9458ab1d78423b65ac25 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 30 2.8E-13 T 05-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AC028_RS00720 b8c42cf9a63f9458ab1d78423b65ac25 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 2.8E-13 T 05-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AC028_RS00720 b8c42cf9a63f9458ab1d78423b65ac25 148 Gene3D G3DSA:1.10.1660.10 57 134 3.6E-15 T 05-07-2017 AC028_RS00720 b8c42cf9a63f9458ab1d78423b65ac25 148 SUPERFAMILY SSF46955 5 125 6.23E-29 T 05-07-2017 IPR009061 Putative DNA-binding domain AC028_RS00720 b8c42cf9a63f9458ab1d78423b65ac25 148 Pfam PF09278 MerR, DNA binding 47 112 7.9E-17 T 05-07-2017 IPR015358 Transcription regulator MerR, DNA binding AC028_RS00720 b8c42cf9a63f9458ab1d78423b65ac25 148 Gene3D G3DSA:1.10.1660.10 2 56 3.8E-19 T 05-07-2017 AC028_RS00720 b8c42cf9a63f9458ab1d78423b65ac25 148 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 05-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AC028_RS00720 b8c42cf9a63f9458ab1d78423b65ac25 148 SMART SM00422 5 73 3.5E-23 T 05-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AC028_RS00720 b8c42cf9a63f9458ab1d78423b65ac25 148 Pfam PF00376 MerR family regulatory protein 6 42 2.4E-14 T 05-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AC028_RS18880 c9254e659ad6b2287e156105745325f6 330 SUPERFAMILY SSF56219 7 261 5.89E-75 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS18880 c9254e659ad6b2287e156105745325f6 330 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 32 41 - T 05-07-2017 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AC028_RS18880 c9254e659ad6b2287e156105745325f6 330 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 7 260 8.5E-68 T 05-07-2017 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AC028_RS18880 c9254e659ad6b2287e156105745325f6 330 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 9 253 4.1E-21 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS18880 c9254e659ad6b2287e156105745325f6 330 Gene3D G3DSA:3.60.10.10 7 260 1.1E-72 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS18880 c9254e659ad6b2287e156105745325f6 330 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 7 259 3.2E-70 T 05-07-2017 AC028_RS18890 8827d5b5c7e15e8e87e599a576bf05f3 417 SMART SM00852 181 322 9.9E-31 T 05-07-2017 IPR001453 MoaB/Mog domain AC028_RS18890 8827d5b5c7e15e8e87e599a576bf05f3 417 SUPERFAMILY SSF63882 1 177 4.71E-45 T 05-07-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 AC028_RS18890 8827d5b5c7e15e8e87e599a576bf05f3 417 Gene3D G3DSA:3.40.980.10 164 333 8.0E-47 T 05-07-2017 IPR001453 MoaB/Mog domain AC028_RS18890 8827d5b5c7e15e8e87e599a576bf05f3 417 Gene3D G3DSA:2.40.340.10 334 401 9.5E-6 T 05-07-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 AC028_RS18890 8827d5b5c7e15e8e87e599a576bf05f3 417 Gene3D G3DSA:3.90.105.10 133 163 2.3E-16 T 05-07-2017 AC028_RS18890 8827d5b5c7e15e8e87e599a576bf05f3 417 SUPERFAMILY SSF53218 178 326 4.84E-34 T 05-07-2017 IPR001453 MoaB/Mog domain AC028_RS18890 8827d5b5c7e15e8e87e599a576bf05f3 417 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 256 290 - T 05-07-2017 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AC028_RS18890 8827d5b5c7e15e8e87e599a576bf05f3 417 SUPERFAMILY SSF63867 332 407 4.32E-7 T 05-07-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 AC028_RS18890 8827d5b5c7e15e8e87e599a576bf05f3 417 Pfam PF00994 Probable molybdopterin binding domain 181 321 1.9E-26 T 05-07-2017 IPR001453 MoaB/Mog domain AC028_RS18890 8827d5b5c7e15e8e87e599a576bf05f3 417 Pfam PF03454 MoeA C-terminal region (domain IV) 334 401 8.5E-6 T 05-07-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 AC028_RS18890 8827d5b5c7e15e8e87e599a576bf05f3 417 Gene3D G3DSA:2.170.190.11 44 132 1.0E-24 T 05-07-2017 AC028_RS18890 8827d5b5c7e15e8e87e599a576bf05f3 417 Pfam PF03453 MoeA N-terminal region (domain I and II) 2 168 1.4E-32 T 05-07-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 AC028_RS06025 91d3e4f83f948f552fb616eb28cb0fda 289 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 8 288 48.256 T 05-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AC028_RS06025 91d3e4f83f948f552fb616eb28cb0fda 289 SUPERFAMILY SSF53328 94 289 5.1E-62 T 05-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AC028_RS06025 91d3e4f83f948f552fb616eb28cb0fda 289 Pfam PF00551 Formyl transferase 94 270 3.0E-39 T 05-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AC028_RS06025 91d3e4f83f948f552fb616eb28cb0fda 289 PIRSF PIRSF036480 8 289 8.6E-111 T 05-07-2017 AC028_RS06025 91d3e4f83f948f552fb616eb28cb0fda 289 Gene3D G3DSA:3.30.70.260 6 88 1.0E-27 T 05-07-2017 AC028_RS06025 91d3e4f83f948f552fb616eb28cb0fda 289 Pfam PF01842 ACT domain 11 72 3.0E-7 T 05-07-2017 IPR002912 ACT domain GO:0008152|GO:0016597 AC028_RS06025 91d3e4f83f948f552fb616eb28cb0fda 289 SUPERFAMILY SSF55021 7 92 3.33E-20 T 05-07-2017 AC028_RS06025 91d3e4f83f948f552fb616eb28cb0fda 289 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 12 288 2.5E-101 T 05-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AC028_RS06025 91d3e4f83f948f552fb616eb28cb0fda 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 13 39 3.6E-52 T 05-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AC028_RS06025 91d3e4f83f948f552fb616eb28cb0fda 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 94 116 3.6E-52 T 05-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AC028_RS06025 91d3e4f83f948f552fb616eb28cb0fda 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 116 143 3.6E-52 T 05-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AC028_RS06025 91d3e4f83f948f552fb616eb28cb0fda 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 240 262 3.6E-52 T 05-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AC028_RS06025 91d3e4f83f948f552fb616eb28cb0fda 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 262 287 3.6E-52 T 05-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AC028_RS06025 91d3e4f83f948f552fb616eb28cb0fda 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 45 57 3.6E-52 T 05-07-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AC028_RS06025 91d3e4f83f948f552fb616eb28cb0fda 289 Gene3D G3DSA:3.40.50.170 93 284 1.2E-57 T 05-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AC028_RS12295 a74f055c41f11f02c324068fdae0f928 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 7.2E-48 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12295 a74f055c41f11f02c324068fdae0f928 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 7.2E-48 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12295 a74f055c41f11f02c324068fdae0f928 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 7.2E-48 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12295 a74f055c41f11f02c324068fdae0f928 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.2E-48 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12295 a74f055c41f11f02c324068fdae0f928 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 7.2E-48 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12295 a74f055c41f11f02c324068fdae0f928 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 7.2E-48 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12295 a74f055c41f11f02c324068fdae0f928 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 190 1.3E-4 T 05-07-2017 AC028_RS12295 a74f055c41f11f02c324068fdae0f928 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.1E-15 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12295 a74f055c41f11f02c324068fdae0f928 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.1E-15 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12295 a74f055c41f11f02c324068fdae0f928 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.1E-15 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12295 a74f055c41f11f02c324068fdae0f928 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 05-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AC028_RS12295 a74f055c41f11f02c324068fdae0f928 247 SUPERFAMILY SSF51735 6 246 1.26E-82 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS12295 a74f055c41f11f02c324068fdae0f928 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 244 1.2E-64 T 05-07-2017 AC028_RS12295 a74f055c41f11f02c324068fdae0f928 247 Gene3D G3DSA:3.40.50.720 2 246 1.9E-85 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS12295 a74f055c41f11f02c324068fdae0f928 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 245 1.9E-98 T 05-07-2017 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AC028_RS19090 91c21b0b83e173a66249fe4a2905b1b0 239 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 15 228 4.9E-39 T 05-07-2017 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 AC028_RS19090 91c21b0b83e173a66249fe4a2905b1b0 239 Gene3D G3DSA:3.40.50.1360 5 228 7.2E-44 T 05-07-2017 AC028_RS19090 91c21b0b83e173a66249fe4a2905b1b0 239 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 16 226 3.0E-45 T 05-07-2017 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AC028_RS19090 91c21b0b83e173a66249fe4a2905b1b0 239 SUPERFAMILY SSF100950 10 230 4.71E-45 T 05-07-2017 AC028_RS18105 0fcae3d326d3cdaef53a0cae3a01594c 160 SMART SM00260 9 146 3.0E-45 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS18105 0fcae3d326d3cdaef53a0cae3a01594c 160 Pfam PF01584 CheW-like domain 13 149 8.7E-40 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS18105 0fcae3d326d3cdaef53a0cae3a01594c 160 Gene3D G3DSA:2.30.30.40 90 140 1.1E-7 T 05-07-2017 AC028_RS18105 0fcae3d326d3cdaef53a0cae3a01594c 160 SUPERFAMILY SSF50341 12 150 3.79E-42 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS18105 0fcae3d326d3cdaef53a0cae3a01594c 160 Gene3D G3DSA:2.40.50.180 51 89 1.3E-10 T 05-07-2017 AC028_RS00795 818f15557bce5e9b77896b98b7da0c0e 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 140 156 - T 05-07-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AC028_RS00795 818f15557bce5e9b77896b98b7da0c0e 354 SUPERFAMILY SSF51726 1 353 2.79E-116 T 05-07-2017 AC028_RS00795 818f15557bce5e9b77896b98b7da0c0e 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 4 352 50.254 T 05-07-2017 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AC028_RS00795 818f15557bce5e9b77896b98b7da0c0e 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 20 29 - T 05-07-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AC028_RS00795 818f15557bce5e9b77896b98b7da0c0e 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 7 349 6.5E-130 T 05-07-2017 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AC028_RS00795 818f15557bce5e9b77896b98b7da0c0e 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 3 350 3.1E-138 T 05-07-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AC028_RS00795 818f15557bce5e9b77896b98b7da0c0e 354 Gene3D G3DSA:3.20.20.210 1 353 1.4E-149 T 05-07-2017 AC028_RS18665 513d76a46c6fdbf2fe70b5ee4f32c88e 103 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 97 7.3E-19 T 05-07-2017 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AC028_RS18665 513d76a46c6fdbf2fe70b5ee4f32c88e 103 Pfam PF04316 Anti-sigma-28 factor, FlgM 42 96 6.2E-14 T 05-07-2017 IPR031316 Anti-sigma-28 factor FlgM, C-terminal AC028_RS18665 513d76a46c6fdbf2fe70b5ee4f32c88e 103 SUPERFAMILY SSF101498 4 97 7.32E-14 T 05-07-2017 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 SUPERFAMILY SSF100920 385 541 1.96E-59 T 05-07-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 Pfam PF00012 Hsp70 protein 4 601 1.9E-260 T 05-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 SUPERFAMILY SSF53067 4 185 7.12E-66 T 05-07-2017 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 Gene3D G3DSA:3.30.420.40 320 362 5.3E-34 T 05-07-2017 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 Gene3D G3DSA:3.30.420.40 197 230 5.3E-34 T 05-07-2017 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 Gene3D G3DSA:3.30.420.40 120 196 1.3E-64 T 05-07-2017 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 Gene3D G3DSA:3.30.420.40 4 52 1.3E-64 T 05-07-2017 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 05-07-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 Gene3D G3DSA:2.60.34.10 391 532 1.8E-68 T 05-07-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 Gene3D G3DSA:3.90.640.10 231 316 4.8E-31 T 05-07-2017 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 05-07-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 Gene3D G3DSA:3.30.30.30 53 106 1.4E-25 T 05-07-2017 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.4E-81 T 05-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 PRINTS PR00301 70kDa heat shock protein signature 199 209 2.4E-81 T 05-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.4E-81 T 05-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 PRINTS PR00301 70kDa heat shock protein signature 139 159 2.4E-81 T 05-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 PRINTS PR00301 70kDa heat shock protein signature 366 386 2.4E-81 T 05-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 PRINTS PR00301 70kDa heat shock protein signature 470 486 2.4E-81 T 05-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 PRINTS PR00301 70kDa heat shock protein signature 389 408 2.4E-81 T 05-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.4E-81 T 05-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 PRINTS PR00301 70kDa heat shock protein signature 335 351 2.4E-81 T 05-07-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 601 8.0E-285 T 05-07-2017 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 SUPERFAMILY SSF53067 188 383 7.41E-68 T 05-07-2017 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 Gene3D G3DSA:1.20.1270.10 533 602 4.6E-24 T 05-07-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 05-07-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AC028_RS16195 6ffd6a3044b4052a3fa6a02baef9d13b 641 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 636 36.268 T 05-07-2017 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 AC028_RS16935 711dedfcb46f59beaac16c9250fca653 361 PIRSF PIRSF000525 1 361 3.5E-139 T 05-07-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AC028_RS16935 711dedfcb46f59beaac16c9250fca653 361 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 187 206 - T 05-07-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AC028_RS16935 711dedfcb46f59beaac16c9250fca653 361 Gene3D G3DSA:3.90.1150.10 258 360 3.5E-38 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS16935 711dedfcb46f59beaac16c9250fca653 361 Gene3D G3DSA:3.40.640.10 17 257 1.1E-92 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS16935 711dedfcb46f59beaac16c9250fca653 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 47.991 T 05-07-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AC028_RS16935 711dedfcb46f59beaac16c9250fca653 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 360 1.1E-148 T 05-07-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AC028_RS16935 711dedfcb46f59beaac16c9250fca653 361 Pfam PF00266 Aminotransferase class-V 5 348 3.9E-49 T 05-07-2017 IPR000192 Aminotransferase class V domain AC028_RS16935 711dedfcb46f59beaac16c9250fca653 361 SUPERFAMILY SSF53383 1 359 6.03E-106 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS05770 e34fc0e703e43c1a299f5ff2b722d397 572 SUPERFAMILY SSF56219 271 571 8.38E-35 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS05770 e34fc0e703e43c1a299f5ff2b722d397 572 Gene3D G3DSA:3.60.10.10 273 570 3.5E-27 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS05770 e34fc0e703e43c1a299f5ff2b722d397 572 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 278 540 3.0E-10 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS22260 b97999549dce38eeaddc9195f22cea0a 171 Gene3D G3DSA:2.40.50.180 57 92 1.1E-8 T 05-07-2017 AC028_RS22260 b97999549dce38eeaddc9195f22cea0a 171 SMART SM00260 15 156 2.0E-29 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS22260 b97999549dce38eeaddc9195f22cea0a 171 Pfam PF01584 CheW-like domain 19 157 1.1E-32 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS22260 b97999549dce38eeaddc9195f22cea0a 171 SUPERFAMILY SSF50341 11 158 4.97E-36 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS22260 b97999549dce38eeaddc9195f22cea0a 171 Gene3D G3DSA:2.30.30.40 93 150 1.7E-4 T 05-07-2017 AC028_RS10465 ee5a5c299cd059786bdf76bb39623c73 158 Pfam PF00583 Acetyltransferase (GNAT) family 63 134 3.1E-13 T 05-07-2017 IPR000182 GNAT domain GO:0008080 AC028_RS10465 ee5a5c299cd059786bdf76bb39623c73 158 Gene3D G3DSA:3.40.630.30 9 138 5.2E-23 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS10465 ee5a5c299cd059786bdf76bb39623c73 158 SUPERFAMILY SSF55729 9 138 3.43E-24 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS01940 695812619637585cb19baa8243046208 710 SMART SM00642 173 578 6.4E-10 T 05-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AC028_RS01940 695812619637585cb19baa8243046208 710 SUPERFAMILY SSF51445 510 587 1.13E-137 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS01940 695812619637585cb19baa8243046208 710 SUPERFAMILY SSF51445 148 481 1.13E-137 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS01940 695812619637585cb19baa8243046208 710 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 18 705 0.0 T 05-07-2017 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 AC028_RS01940 695812619637585cb19baa8243046208 710 Gene3D G3DSA:2.60.40.1180 599 707 9.1E-26 T 05-07-2017 IPR013780 Glycosyl hydrolase, all-beta AC028_RS01940 695812619637585cb19baa8243046208 710 Gene3D G3DSA:2.60.40.10 18 166 5.7E-56 T 05-07-2017 IPR013783 Immunoglobulin-like fold AC028_RS01940 695812619637585cb19baa8243046208 710 Gene3D G3DSA:3.20.20.80 167 587 1.6E-124 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS01940 695812619637585cb19baa8243046208 710 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 24 108 2.5E-20 T 05-07-2017 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AC028_RS01940 695812619637585cb19baa8243046208 710 Pfam PF00128 Alpha amylase, catalytic domain 201 311 2.1E-13 T 05-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AC028_RS01940 695812619637585cb19baa8243046208 710 SUPERFAMILY SSF81296 18 161 8.96E-49 T 05-07-2017 IPR014756 Immunoglobulin E-set AC028_RS01940 695812619637585cb19baa8243046208 710 SUPERFAMILY SSF51011 599 707 7.2E-24 T 05-07-2017 AC028_RS06345 b97cf8219bd41db0d2757fbca26b673f 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 254 2.4E-38 T 05-07-2017 AC028_RS06345 b97cf8219bd41db0d2757fbca26b673f 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.9E-5 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06345 b97cf8219bd41db0d2757fbca26b673f 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.9E-5 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06345 b97cf8219bd41db0d2757fbca26b673f 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.9E-5 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06345 b97cf8219bd41db0d2757fbca26b673f 260 SUPERFAMILY SSF51735 7 255 3.36E-60 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS06345 b97cf8219bd41db0d2757fbca26b673f 260 Gene3D G3DSA:3.40.50.720 4 254 3.0E-60 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS06345 b97cf8219bd41db0d2757fbca26b673f 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.3E-23 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06345 b97cf8219bd41db0d2757fbca26b673f 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 5.3E-23 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06345 b97cf8219bd41db0d2757fbca26b673f 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 5.3E-23 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06345 b97cf8219bd41db0d2757fbca26b673f 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 5.3E-23 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06345 b97cf8219bd41db0d2757fbca26b673f 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.3E-23 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06345 b97cf8219bd41db0d2757fbca26b673f 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.3E-23 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS04925 87a51d9efeb018047c3db25d2d55293a 293 Gene3D G3DSA:3.40.190.10 86 172 5.2E-20 T 05-07-2017 AC028_RS04925 87a51d9efeb018047c3db25d2d55293a 293 Pfam PF03466 LysR substrate binding domain 82 290 8.4E-32 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS04925 87a51d9efeb018047c3db25d2d55293a 293 Gene3D G3DSA:3.40.190.10 173 257 1.2E-9 T 05-07-2017 AC028_RS04925 87a51d9efeb018047c3db25d2d55293a 293 Gene3D G3DSA:1.10.10.10 1 81 1.4E-22 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS04925 87a51d9efeb018047c3db25d2d55293a 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 56 7.8E-19 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS04925 87a51d9efeb018047c3db25d2d55293a 293 SUPERFAMILY SSF53850 83 289 6.21E-36 T 05-07-2017 AC028_RS04925 87a51d9efeb018047c3db25d2d55293a 293 SUPERFAMILY SSF46785 2 105 6.63E-21 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS08150 6d5a76938d8e4cbdd96e16021bd93054 205 Pfam PF00293 NUDIX domain 7 129 3.9E-24 T 05-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AC028_RS08150 6d5a76938d8e4cbdd96e16021bd93054 205 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 36.373 T 05-07-2017 IPR022927 RNA pyrophosphohydrolase RppH AC028_RS08150 6d5a76938d8e4cbdd96e16021bd93054 205 SUPERFAMILY SSF55811 7 151 1.19E-29 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS08150 6d5a76938d8e4cbdd96e16021bd93054 205 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 05-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AC028_RS08150 6d5a76938d8e4cbdd96e16021bd93054 205 Gene3D G3DSA:3.90.79.10 4 149 1.0E-29 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS17780 2b7999e932a3d08617d4995bcbfc4a47 253 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 198 214 3.1E-11 T 05-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AC028_RS17780 2b7999e932a3d08617d4995bcbfc4a47 253 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 214 229 3.1E-11 T 05-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AC028_RS17780 2b7999e932a3d08617d4995bcbfc4a47 253 SMART SM00100 38 156 1.4E-16 T 05-07-2017 IPR000595 Cyclic nucleotide-binding domain AC028_RS17780 2b7999e932a3d08617d4995bcbfc4a47 253 Pfam PF00027 Cyclic nucleotide-binding domain 59 141 1.3E-14 T 05-07-2017 IPR000595 Cyclic nucleotide-binding domain AC028_RS17780 2b7999e932a3d08617d4995bcbfc4a47 253 SUPERFAMILY SSF51206 31 166 2.62E-27 T 05-07-2017 IPR018490 Cyclic nucleotide-binding-like AC028_RS17780 2b7999e932a3d08617d4995bcbfc4a47 253 Gene3D G3DSA:1.10.10.10 176 250 1.6E-22 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS17780 2b7999e932a3d08617d4995bcbfc4a47 253 Gene3D G3DSA:2.60.120.10 38 175 5.4E-25 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS17780 2b7999e932a3d08617d4995bcbfc4a47 253 SMART SM00419 192 241 5.0E-15 T 05-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AC028_RS17780 2b7999e932a3d08617d4995bcbfc4a47 253 Pfam PF13545 Crp-like helix-turn-helix domain 173 248 8.8E-21 T 05-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AC028_RS17780 2b7999e932a3d08617d4995bcbfc4a47 253 SUPERFAMILY SSF46785 172 250 9.98E-18 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS07500 0206b97d77b5502e4e65bfcf6dbf7dd7 433 Gene3D G3DSA:1.20.1250.20 22 226 3.0E-17 T 05-07-2017 AC028_RS07500 0206b97d77b5502e4e65bfcf6dbf7dd7 433 SUPERFAMILY SSF103473 11 425 6.8E-41 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS07500 0206b97d77b5502e4e65bfcf6dbf7dd7 433 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 19 422 3.8E-137 T 05-07-2017 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 AC028_RS07500 0206b97d77b5502e4e65bfcf6dbf7dd7 433 Pfam PF07690 Major Facilitator Superfamily 28 376 2.9E-21 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS07500 0206b97d77b5502e4e65bfcf6dbf7dd7 433 Gene3D G3DSA:1.20.1250.20 244 428 3.9E-10 T 05-07-2017 AC028_RS12995 5c9d0a76c601516a1d76e161ba792704 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.039 T 05-07-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS12995 5c9d0a76c601516a1d76e161ba792704 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 86 1.5E-28 T 05-07-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS12995 5c9d0a76c601516a1d76e161ba792704 89 Gene3D G3DSA:1.20.58.110 3 87 2.2E-28 T 05-07-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS12995 5c9d0a76c601516a1d76e161ba792704 89 Pfam PF01649 Ribosomal protein S20 2 84 2.5E-26 T 05-07-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS12995 5c9d0a76c601516a1d76e161ba792704 89 SUPERFAMILY SSF46992 3 86 2.35E-29 T 05-07-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS12995 5c9d0a76c601516a1d76e161ba792704 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 89 4.0E-25 T 05-07-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS09975 b9887555f8a41e90bb48596ee3907ed7 368 SUPERFAMILY SSF51735 159 332 9.63E-44 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS09975 b9887555f8a41e90bb48596ee3907ed7 368 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 148 5.5E-21 T 05-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AC028_RS09975 b9887555f8a41e90bb48596ee3907ed7 368 SUPERFAMILY SSF50129 317 367 2.12E-5 T 05-07-2017 IPR011032 GroES-like AC028_RS09975 b9887555f8a41e90bb48596ee3907ed7 368 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 368 1.5E-180 T 05-07-2017 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|Reactome: R-HSA-71384 AC028_RS09975 b9887555f8a41e90bb48596ee3907ed7 368 SUPERFAMILY SSF50129 1 180 3.65E-67 T 05-07-2017 IPR011032 GroES-like AC028_RS09975 b9887555f8a41e90bb48596ee3907ed7 368 Pfam PF00107 Zinc-binding dehydrogenase 196 321 1.5E-22 T 05-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AC028_RS09975 b9887555f8a41e90bb48596ee3907ed7 368 Gene3D G3DSA:3.90.180.10 1 188 1.9E-62 T 05-07-2017 IPR011032 GroES-like AC028_RS09975 b9887555f8a41e90bb48596ee3907ed7 368 SMART SM00829 10 366 5.7E-4 T 05-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AC028_RS09975 b9887555f8a41e90bb48596ee3907ed7 368 Gene3D G3DSA:3.40.50.720 189 308 1.5E-38 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS06435 a37ba2c50ebae5b482065fdbaad655c0 888 PIRSF PIRSF000437 73 886 0.0 T 05-07-2017 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 AC028_RS06435 a37ba2c50ebae5b482065fdbaad655c0 888 Gene3D G3DSA:3.40.1130.10 344 492 4.7E-9 T 05-07-2017 AC028_RS06435 a37ba2c50ebae5b482065fdbaad655c0 888 SMART SM00563 359 486 6.4E-29 T 05-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AC028_RS06435 a37ba2c50ebae5b482065fdbaad655c0 888 PIRSF PIRSF500064 48 887 0.0 T 05-07-2017 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 AC028_RS06435 a37ba2c50ebae5b482065fdbaad655c0 888 Pfam PF01553 Acyltransferase 344 483 1.3E-23 T 05-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AC028_RS06435 a37ba2c50ebae5b482065fdbaad655c0 888 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 64 875 29.543 T 05-07-2017 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 AC028_RS06435 a37ba2c50ebae5b482065fdbaad655c0 888 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 69 871 0.0 T 05-07-2017 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 AC028_RS06435 a37ba2c50ebae5b482065fdbaad655c0 888 SUPERFAMILY SSF69593 324 543 7.06E-29 T 05-07-2017 AC028_RS15425 648584939a67e07086bb26a62ef85c71 817 Pfam PF01103 Surface antigen 483 817 1.6E-91 T 05-07-2017 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 AC028_RS15425 648584939a67e07086bb26a62ef85c71 817 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 30 817 25.415 T 05-07-2017 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AC028_RS15425 648584939a67e07086bb26a62ef85c71 817 PIRSF PIRSF006076 25 817 6.5E-255 T 05-07-2017 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AC028_RS15425 648584939a67e07086bb26a62ef85c71 817 Pfam PF07244 Surface antigen variable number repeat 62 126 1.4E-4 T 05-07-2017 IPR010827 Surface antigen variable number GO:0019867 AC028_RS15425 648584939a67e07086bb26a62ef85c71 817 Pfam PF07244 Surface antigen variable number repeat 211 298 1.8E-11 T 05-07-2017 IPR010827 Surface antigen variable number GO:0019867 AC028_RS15425 648584939a67e07086bb26a62ef85c71 817 Pfam PF07244 Surface antigen variable number repeat 382 455 3.6E-15 T 05-07-2017 IPR010827 Surface antigen variable number GO:0019867 AC028_RS15425 648584939a67e07086bb26a62ef85c71 817 Pfam PF07244 Surface antigen variable number repeat 128 207 2.8E-12 T 05-07-2017 IPR010827 Surface antigen variable number GO:0019867 AC028_RS15425 648584939a67e07086bb26a62ef85c71 817 Pfam PF07244 Surface antigen variable number repeat 301 379 9.2E-12 T 05-07-2017 IPR010827 Surface antigen variable number GO:0019867 AC028_RS15425 648584939a67e07086bb26a62ef85c71 817 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 60 817 4.9E-245 T 05-07-2017 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AC028_RS21965 087a64fc102b22d6e67489741f93f0da 455 SUPERFAMILY SSF111283 21 453 1.83E-124 T 05-07-2017 AC028_RS21965 087a64fc102b22d6e67489741f93f0da 455 Pfam PF01523 Putative modulator of DNA gyrase 39 331 2.8E-55 T 05-07-2017 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AC028_RS12340 9e215046c3fb5995135a0a3005029dfe 533 SUPERFAMILY SSF159800 15 195 1.31E-46 T 05-07-2017 AC028_RS12340 9e215046c3fb5995135a0a3005029dfe 533 SUPERFAMILY SSF52540 220 446 1.56E-58 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12340 9e215046c3fb5995135a0a3005029dfe 533 Gene3D G3DSA:3.40.50.2300 5 101 1.5E-43 T 05-07-2017 AC028_RS12340 9e215046c3fb5995135a0a3005029dfe 533 Pfam PF02954 Bacterial regulatory protein, Fis family 497 525 1.2E-7 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS12340 9e215046c3fb5995135a0a3005029dfe 533 SMART SM00382 239 382 4.3E-10 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS12340 9e215046c3fb5995135a0a3005029dfe 533 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 510 530 1.3E-5 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS12340 9e215046c3fb5995135a0a3005029dfe 533 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 493 510 1.3E-5 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS12340 9e215046c3fb5995135a0a3005029dfe 533 Gene3D G3DSA:3.40.50.300 217 391 3.2E-51 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12340 9e215046c3fb5995135a0a3005029dfe 533 SUPERFAMILY SSF46689 428 525 2.33E-7 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS12340 9e215046c3fb5995135a0a3005029dfe 533 TIGRFAM TIGR02329 propionate_PrpR: propionate catabolism operon regulatory protein PrpR 12 526 6.1E-236 T 05-07-2017 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0005737|GO:0019629 AC028_RS12340 9e215046c3fb5995135a0a3005029dfe 533 Pfam PF00158 Sigma-54 interaction domain 220 385 2.7E-60 T 05-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AC028_RS12340 9e215046c3fb5995135a0a3005029dfe 533 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 243 256 - T 05-07-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AC028_RS12340 9e215046c3fb5995135a0a3005029dfe 533 Gene3D G3DSA:3.40.50.10660 102 180 1.7E-35 T 05-07-2017 AC028_RS12340 9e215046c3fb5995135a0a3005029dfe 533 Pfam PF06506 Propionate catabolism activator 37 195 3.7E-45 T 05-07-2017 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 AC028_RS12340 9e215046c3fb5995135a0a3005029dfe 533 Gene3D G3DSA:1.10.8.60 392 437 1.2E-16 T 05-07-2017 AC028_RS12340 9e215046c3fb5995135a0a3005029dfe 533 Gene3D G3DSA:1.10.10.60 438 526 8.2E-15 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS12340 9e215046c3fb5995135a0a3005029dfe 533 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 428 437 - T 05-07-2017 IPR025944 Sigma-54 interaction domain, conserved site AC028_RS12350 b708ec2b6c1c5aab267ba7efd78a159b 384 Gene3D G3DSA:1.10.580.10 22 244 2.3E-75 T 05-07-2017 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AC028_RS12350 b708ec2b6c1c5aab267ba7efd78a159b 384 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 16 383 1.7E-153 T 05-07-2017 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 AC028_RS12350 b708ec2b6c1c5aab267ba7efd78a159b 384 SUPERFAMILY SSF48256 17 377 2.49E-122 T 05-07-2017 IPR002020 Citrate synthase GO:0046912 AC028_RS12350 b708ec2b6c1c5aab267ba7efd78a159b 384 Pfam PF00285 Citrate synthase, C-terminal domain 17 365 3.8E-113 T 05-07-2017 IPR002020 Citrate synthase GO:0046912 AC028_RS12350 b708ec2b6c1c5aab267ba7efd78a159b 384 Gene3D G3DSA:1.10.230.10 245 330 1.6E-28 T 05-07-2017 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 AC028_RS12350 b708ec2b6c1c5aab267ba7efd78a159b 384 ProSitePatterns PS00480 Citrate synthase signature. 266 278 - T 05-07-2017 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AC028_RS12350 b708ec2b6c1c5aab267ba7efd78a159b 384 PRINTS PR00143 Citrate synthase signature 336 350 1.3E-36 T 05-07-2017 IPR002020 Citrate synthase GO:0046912 AC028_RS12350 b708ec2b6c1c5aab267ba7efd78a159b 384 PRINTS PR00143 Citrate synthase signature 134 147 1.3E-36 T 05-07-2017 IPR002020 Citrate synthase GO:0046912 AC028_RS12350 b708ec2b6c1c5aab267ba7efd78a159b 384 PRINTS PR00143 Citrate synthase signature 259 279 1.3E-36 T 05-07-2017 IPR002020 Citrate synthase GO:0046912 AC028_RS12350 b708ec2b6c1c5aab267ba7efd78a159b 384 PRINTS PR00143 Citrate synthase signature 184 199 1.3E-36 T 05-07-2017 IPR002020 Citrate synthase GO:0046912 AC028_RS12350 b708ec2b6c1c5aab267ba7efd78a159b 384 PRINTS PR00143 Citrate synthase signature 206 234 1.3E-36 T 05-07-2017 IPR002020 Citrate synthase GO:0046912 AC028_RS12350 b708ec2b6c1c5aab267ba7efd78a159b 384 PRINTS PR00143 Citrate synthase signature 316 332 1.3E-36 T 05-07-2017 IPR002020 Citrate synthase GO:0046912 AC028_RS12350 b708ec2b6c1c5aab267ba7efd78a159b 384 PIRSF PIRSF001369 10 384 3.7E-110 T 05-07-2017 IPR024176 Citrate synthase, bacterial-type AC028_RS15260 617cad68c353bec9e71b753d2d722735 308 Pfam PF02470 MlaD protein 39 115 1.6E-14 T 05-07-2017 IPR003399 Mce/MlaD AC028_RS14490 8512c77beb8fe3dd5fd4f7f4000e0e18 689 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 517 533 1.4E-17 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS14490 8512c77beb8fe3dd5fd4f7f4000e0e18 689 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 478 490 1.4E-17 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS14490 8512c77beb8fe3dd5fd4f7f4000e0e18 689 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 496 508 1.4E-17 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS14490 8512c77beb8fe3dd5fd4f7f4000e0e18 689 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 588 599 1.4E-17 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS14490 8512c77beb8fe3dd5fd4f7f4000e0e18 689 Pfam PF01431 Peptidase family M13 486 686 5.7E-61 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS14490 8512c77beb8fe3dd5fd4f7f4000e0e18 689 SUPERFAMILY SSF55486 37 689 1.1E-195 T 05-07-2017 AC028_RS14490 8512c77beb8fe3dd5fd4f7f4000e0e18 689 Pfam PF05649 Peptidase family M13 49 434 3.6E-88 T 05-07-2017 IPR008753 Peptidase M13, N-terminal domain GO:0006508 AC028_RS14490 8512c77beb8fe3dd5fd4f7f4000e0e18 689 Gene3D G3DSA:3.40.390.10 316 437 6.1E-100 T 05-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AC028_RS14490 8512c77beb8fe3dd5fd4f7f4000e0e18 689 Gene3D G3DSA:3.40.390.10 477 689 6.1E-100 T 05-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AC028_RS20100 eb98ece527faacd9b92c418dd2c05567 86 SUPERFAMILY SSF54909 3 84 9.92E-13 T 05-07-2017 IPR011008 Dimeric alpha-beta barrel AC028_RS20100 eb98ece527faacd9b92c418dd2c05567 86 Gene3D G3DSA:3.30.70.1060 5 84 5.1E-8 T 05-07-2017 AC028_RS20100 eb98ece527faacd9b92c418dd2c05567 86 Pfam PF03795 YCII-related domain 5 84 2.1E-7 T 05-07-2017 IPR005545 YCII-related AC028_RS16560 4638f9e96c4b14e2aea356202e8126de 226 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 05-07-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AC028_RS16560 4638f9e96c4b14e2aea356202e8126de 226 SMART SM00947 27 194 2.3E-68 T 05-07-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AC028_RS16560 4638f9e96c4b14e2aea356202e8126de 226 Gene3D G3DSA:3.40.1050.10 1 203 1.5E-74 T 05-07-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AC028_RS16560 4638f9e96c4b14e2aea356202e8126de 226 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 05-07-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AC028_RS16560 4638f9e96c4b14e2aea356202e8126de 226 Pfam PF00484 Carbonic anhydrase 34 190 1.3E-52 T 05-07-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AC028_RS16560 4638f9e96c4b14e2aea356202e8126de 226 SUPERFAMILY SSF53056 1 204 1.57E-67 T 05-07-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AC028_RS05220 c88991fdd94a2e63b06882de545ea3e0 401 Pfam PF00487 Fatty acid desaturase 20 242 1.0E-11 T 05-07-2017 IPR005804 Fatty acid desaturase domain GO:0006629 AC028_RS02010 5c9879a03eeebf00dca653c283df2009 252 Gene3D G3DSA:3.40.50.150 62 198 1.5E-15 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS02010 5c9879a03eeebf00dca653c283df2009 252 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 30 244 27.932 T 05-07-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AC028_RS02010 5c9879a03eeebf00dca653c283df2009 252 SUPERFAMILY SSF53335 23 241 1.42E-37 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS02010 5c9879a03eeebf00dca653c283df2009 252 Pfam PF02390 Putative methyltransferase 72 239 3.8E-48 T 05-07-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AC028_RS02010 5c9879a03eeebf00dca653c283df2009 252 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 56 242 2.0E-45 T 05-07-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AC028_RS01310 e620d68950640aa3be9594cc76228f2c 598 SUPERFAMILY SSF52540 4 190 3.59E-43 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01310 e620d68950640aa3be9594cc76228f2c 598 Gene3D G3DSA:3.40.50.300 198 336 1.9E-47 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01310 e620d68950640aa3be9594cc76228f2c 598 Pfam PF09382 RQC domain 401 507 1.9E-42 T 05-07-2017 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AC028_RS01310 e620d68950640aa3be9594cc76228f2c 598 Pfam PF00570 HRDC domain 527 594 9.4E-22 T 05-07-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 AC028_RS01310 e620d68950640aa3be9594cc76228f2c 598 SUPERFAMILY SSF47819 522 596 3.27E-22 T 05-07-2017 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AC028_RS01310 e620d68950640aa3be9594cc76228f2c 598 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 6 597 2.0E-266 T 05-07-2017 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 AC028_RS01310 e620d68950640aa3be9594cc76228f2c 598 SMART SM00956 404 507 2.0E-57 T 05-07-2017 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AC028_RS01310 e620d68950640aa3be9594cc76228f2c 598 SMART SM00341 524 597 1.5E-10 T 05-07-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 AC028_RS01310 e620d68950640aa3be9594cc76228f2c 598 Pfam PF16124 RecQ zinc-binding 335 397 6.3E-19 T 05-07-2017 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AC028_RS01310 e620d68950640aa3be9594cc76228f2c 598 Gene3D G3DSA:1.10.150.80 527 595 2.5E-17 T 05-07-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 AC028_RS01310 e620d68950640aa3be9594cc76228f2c 598 SMART SM00490 242 323 5.9E-23 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS01310 e620d68950640aa3be9594cc76228f2c 598 SUPERFAMILY SSF52540 200 452 7.17E-63 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01310 e620d68950640aa3be9594cc76228f2c 598 Pfam PF00270 DEAD/DEAH box helicase 22 177 3.3E-17 T 05-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AC028_RS01310 e620d68950640aa3be9594cc76228f2c 598 SMART SM00487 14 210 1.1E-25 T 05-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_RS01310 e620d68950640aa3be9594cc76228f2c 598 Pfam PF00271 Helicase conserved C-terminal domain 218 323 1.3E-13 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS01310 e620d68950640aa3be9594cc76228f2c 598 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 456 1.7E-154 T 05-07-2017 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AC028_RS01310 e620d68950640aa3be9594cc76228f2c 598 Gene3D G3DSA:1.10.10.10 337 508 1.6E-62 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS01310 e620d68950640aa3be9594cc76228f2c 598 Gene3D G3DSA:3.40.50.300 5 192 1.6E-55 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02170 e60e201ef1641a061f517a5752594368 658 SUPERFAMILY SSF52540 45 259 2.14E-56 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02170 e60e201ef1641a061f517a5752594368 658 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 53 457 1.6E-208 T 05-07-2017 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AC028_RS02170 e60e201ef1641a061f517a5752594368 658 Pfam PF00009 Elongation factor Tu GTP binding domain 52 238 5.2E-41 T 05-07-2017 AC028_RS02170 e60e201ef1641a061f517a5752594368 658 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 486 658 37.79 T 05-07-2017 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AC028_RS02170 e60e201ef1641a061f517a5752594368 658 Gene3D G3DSA:2.40.30.10 354 457 9.6E-9 T 05-07-2017 AC028_RS02170 e60e201ef1641a061f517a5752594368 658 Gene3D G3DSA:3.40.50.300 44 261 7.9E-65 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02170 e60e201ef1641a061f517a5752594368 658 PRINTS PR00315 GTP-binding elongation factor signature 151 162 3.1E-13 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS02170 e60e201ef1641a061f517a5752594368 658 PRINTS PR00315 GTP-binding elongation factor signature 54 67 3.1E-13 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS02170 e60e201ef1641a061f517a5752594368 658 PRINTS PR00315 GTP-binding elongation factor signature 115 123 3.1E-13 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS02170 e60e201ef1641a061f517a5752594368 658 PRINTS PR00315 GTP-binding elongation factor signature 188 197 3.1E-13 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS02170 e60e201ef1641a061f517a5752594368 658 PRINTS PR00315 GTP-binding elongation factor signature 135 145 3.1E-13 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS02170 e60e201ef1641a061f517a5752594368 658 Pfam PF01583 Adenylylsulphate kinase 489 641 5.0E-70 T 05-07-2017 AC028_RS02170 e60e201ef1641a061f517a5752594368 658 SUPERFAMILY SSF50465 356 457 1.87E-33 T 05-07-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AC028_RS02170 e60e201ef1641a061f517a5752594368 658 Gene3D G3DSA:2.40.30.10 269 350 5.6E-17 T 05-07-2017 AC028_RS02170 e60e201ef1641a061f517a5752594368 658 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 44 487 51.876 T 05-07-2017 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AC028_RS02170 e60e201ef1641a061f517a5752594368 658 SUPERFAMILY SSF52540 485 654 2.66E-35 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02170 e60e201ef1641a061f517a5752594368 658 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 474 654 6.8E-77 T 05-07-2017 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AC028_RS02170 e60e201ef1641a061f517a5752594368 658 Gene3D G3DSA:3.40.50.300 467 654 1.6E-82 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02170 e60e201ef1641a061f517a5752594368 658 SUPERFAMILY SSF50447 266 355 1.43E-22 T 05-07-2017 IPR009000 Translation protein, beta-barrel domain AC028_RS02170 e60e201ef1641a061f517a5752594368 658 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 108 123 - T 05-07-2017 IPR031157 Tr-type G domain, conserved site AC028_RS20865 8c80c7c384bc5c0c4258a547a1a29ba6 117 Pfam PF02699 Preprotein translocase subunit 31 104 1.6E-28 T 05-07-2017 IPR003849 Preprotein translocase YajC AC028_RS20865 8c80c7c384bc5c0c4258a547a1a29ba6 117 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 29 108 7.3E-27 T 05-07-2017 IPR003849 Preprotein translocase YajC AC028_RS20865 8c80c7c384bc5c0c4258a547a1a29ba6 117 PRINTS PR01853 Bacterial YajC preprotein translocase signature 66 84 4.7E-13 T 05-07-2017 IPR003849 Preprotein translocase YajC AC028_RS20865 8c80c7c384bc5c0c4258a547a1a29ba6 117 PRINTS PR01853 Bacterial YajC preprotein translocase signature 28 48 4.7E-13 T 05-07-2017 IPR003849 Preprotein translocase YajC AC028_RS20865 8c80c7c384bc5c0c4258a547a1a29ba6 117 SMART SM01323 26 108 3.5E-44 T 05-07-2017 IPR003849 Preprotein translocase YajC AC028_RS01765 d933033bfef0d4796400cdb3fdb6b56a 811 Gene3D G3DSA:2.40.170.20 174 811 5.2E-87 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01765 d933033bfef0d4796400cdb3fdb6b56a 811 Pfam PF00593 TonB dependent receptor 497 797 4.0E-24 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01765 d933033bfef0d4796400cdb3fdb6b56a 811 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 171 8.5E-22 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS01765 d933033bfef0d4796400cdb3fdb6b56a 811 Gene3D G3DSA:2.170.130.10 48 173 3.6E-31 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS01765 d933033bfef0d4796400cdb3fdb6b56a 811 SUPERFAMILY SSF56935 34 811 8.79E-105 T 05-07-2017 AC028_RS01765 d933033bfef0d4796400cdb3fdb6b56a 811 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 41 - T 05-07-2017 IPR010916 TonB box, conserved site AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 SUPERFAMILY SSF50249 609 695 2.91E-22 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 SUPERFAMILY SSF46915 225 327 8.11E-18 T 05-07-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 SMART SM00322 553 618 3.8E-12 T 05-07-2017 IPR004087 K Homology domain GO:0003676 AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 Pfam PF00013 KH domain 558 615 8.8E-10 T 05-07-2017 IPR004088 K Homology domain, type 1 GO:0003723 AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 244 320 2.5E-12 T 05-07-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 SUPERFAMILY SSF54211 4 143 2.48E-48 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 Gene3D G3DSA:3.30.230.70 3 222 2.7E-80 T 05-07-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 Gene3D G3DSA:3.30.230.70 316 542 3.8E-88 T 05-07-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 Gene3D G3DSA:2.40.50.140 619 695 1.8E-27 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 3.2E-18 T 05-07-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 7.7E-21 T 05-07-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 SUPERFAMILY SSF54791 553 630 2.43E-17 T 05-07-2017 IPR004088 K Homology domain, type 1 GO:0003723 AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 SMART SM00316 621 691 4.9E-26 T 05-07-2017 IPR022967 RNA-binding domain, S1 AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 Pfam PF00575 S1 RNA binding domain 620 691 1.4E-20 T 05-07-2017 IPR003029 S1 domain GO:0003676 AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 Gene3D G3DSA:1.10.10.400 226 315 6.0E-17 T 05-07-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 693 0.0 T 05-07-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 694 30.368 T 05-07-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 SUPERFAMILY SSF54211 305 493 3.19E-47 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 SUPERFAMILY SSF55666 451 550 9.96E-29 T 05-07-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 PIRSF PIRSF005499 1 704 3.3E-293 T 05-07-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 Pfam PF03725 3' exoribonuclease family, domain 2 146 209 8.0E-11 T 05-07-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 Pfam PF03725 3' exoribonuclease family, domain 2 460 529 8.7E-7 T 05-07-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 Gene3D G3DSA:3.30.1370.10 552 618 7.6E-26 T 05-07-2017 IPR004088 K Homology domain, type 1 GO:0003723 AC028_RS21520 ee51f54393bfa35ed5c5172abb2984e7 704 SUPERFAMILY SSF55666 144 234 8.98E-28 T 05-07-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AC028_RS11345 0c951ad296baa4705cd6b616b95e318f 191 Gene3D G3DSA:3.40.109.10 7 186 4.7E-34 T 05-07-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AC028_RS11345 0c951ad296baa4705cd6b616b95e318f 191 SUPERFAMILY SSF55469 7 187 2.49E-31 T 05-07-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AC028_RS11345 0c951ad296baa4705cd6b616b95e318f 191 PIRSF PIRSF000232 1 191 5.1E-61 T 05-07-2017 IPR026021 Putative NAD(P)H nitroreductase YdjA-like AC028_RS11345 0c951ad296baa4705cd6b616b95e318f 191 Pfam PF00881 Nitroreductase family 12 168 2.5E-21 T 05-07-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 AC028_RS02055 3159c0cb9cbf5100f1a06362aaca51c2 978 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 171 3.6E-14 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS02055 3159c0cb9cbf5100f1a06362aaca51c2 978 Gene3D G3DSA:2.170.130.10 60 180 1.7E-17 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS02055 3159c0cb9cbf5100f1a06362aaca51c2 978 Pfam PF00593 TonB dependent receptor 688 977 1.9E-30 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02055 3159c0cb9cbf5100f1a06362aaca51c2 978 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 42 978 3.1E-246 T 05-07-2017 IPR010104 Bacterial TonB-dependent receptor AC028_RS02055 3159c0cb9cbf5100f1a06362aaca51c2 978 SUPERFAMILY SSF56935 584 717 7.14E-89 T 05-07-2017 AC028_RS02055 3159c0cb9cbf5100f1a06362aaca51c2 978 SUPERFAMILY SSF56935 750 978 7.14E-89 T 05-07-2017 AC028_RS02055 3159c0cb9cbf5100f1a06362aaca51c2 978 SUPERFAMILY SSF56935 453 515 7.14E-89 T 05-07-2017 AC028_RS02055 3159c0cb9cbf5100f1a06362aaca51c2 978 SUPERFAMILY SSF56935 31 238 7.14E-89 T 05-07-2017 AC028_RS02055 3159c0cb9cbf5100f1a06362aaca51c2 978 SUPERFAMILY SSF56935 291 421 7.14E-89 T 05-07-2017 AC028_RS02055 3159c0cb9cbf5100f1a06362aaca51c2 978 Gene3D G3DSA:2.40.170.20 462 519 9.2E-57 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02055 3159c0cb9cbf5100f1a06362aaca51c2 978 Gene3D G3DSA:2.40.170.20 181 252 9.2E-57 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02055 3159c0cb9cbf5100f1a06362aaca51c2 978 Gene3D G3DSA:2.40.170.20 613 648 9.2E-57 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02055 3159c0cb9cbf5100f1a06362aaca51c2 978 Gene3D G3DSA:2.40.170.20 681 978 9.2E-57 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02055 3159c0cb9cbf5100f1a06362aaca51c2 978 Gene3D G3DSA:2.40.170.20 290 406 9.2E-57 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS13880 3ea58c1db225143de2bbe192d8c455b3 264 Gene3D G3DSA:3.40.50.2300 1 119 2.5E-19 T 05-07-2017 AC028_RS13880 3ea58c1db225143de2bbe192d8c455b3 264 SUPERFAMILY SSF52172 1 118 2.7E-20 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS13880 3ea58c1db225143de2bbe192d8c455b3 264 Pfam PF00072 Response regulator receiver domain 1 113 5.6E-13 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS13880 3ea58c1db225143de2bbe192d8c455b3 264 Pfam PF00072 Response regulator receiver domain 127 248 2.1E-16 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS13880 3ea58c1db225143de2bbe192d8c455b3 264 SMART SM00448 125 248 1.3E-20 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS13880 3ea58c1db225143de2bbe192d8c455b3 264 SMART SM00448 1 113 6.8E-6 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS13880 3ea58c1db225143de2bbe192d8c455b3 264 Gene3D G3DSA:3.40.50.2300 125 260 1.0E-24 T 05-07-2017 AC028_RS13880 3ea58c1db225143de2bbe192d8c455b3 264 SUPERFAMILY SSF52172 125 260 5.55E-24 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS05210 752a85b6568a1515e2fffea04117a07b 335 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 73 295 1.3E-29 T 05-07-2017 IPR002838 Mitochondrial biogenesis protein AIM24 AC028_RS05210 752a85b6568a1515e2fffea04117a07b 335 Pfam PF01987 Mitochondrial biogenesis AIM24 74 294 6.8E-65 T 05-07-2017 IPR002838 Mitochondrial biogenesis protein AIM24 AC028_RS05210 752a85b6568a1515e2fffea04117a07b 335 SUPERFAMILY SSF51219 72 313 5.23E-80 T 05-07-2017 IPR016031 Tryptophan RNA-binding attenuator protein-like domain AC028_RS05210 752a85b6568a1515e2fffea04117a07b 335 Gene3D G3DSA:3.60.160.10 69 318 1.4E-102 T 05-07-2017 IPR002838 Mitochondrial biogenesis protein AIM24 AC028_RS17880 3d7ee7a8f88a2d0298f64a5ec7e6d32b 413 SUPERFAMILY SSF52283 10 137 6.17E-47 T 05-07-2017 AC028_RS17880 3d7ee7a8f88a2d0298f64a5ec7e6d32b 413 Gene3D G3DSA:3.40.50.720 122 299 6.7E-62 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS17880 3d7ee7a8f88a2d0298f64a5ec7e6d32b 413 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 202 224 - T 05-07-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AC028_RS17880 3d7ee7a8f88a2d0298f64a5ec7e6d32b 413 Gene3D G3DSA:3.30.70.260 326 412 6.0E-24 T 05-07-2017 AC028_RS17880 3d7ee7a8f88a2d0298f64a5ec7e6d32b 413 SUPERFAMILY SSF51735 110 297 1.62E-56 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS17880 3d7ee7a8f88a2d0298f64a5ec7e6d32b 413 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 328 1.1E-36 T 05-07-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AC028_RS17880 3d7ee7a8f88a2d0298f64a5ec7e6d32b 413 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 121 296 7.7E-51 T 05-07-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AC028_RS17880 3d7ee7a8f88a2d0298f64a5ec7e6d32b 413 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 156 183 - T 05-07-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AC028_RS17880 3d7ee7a8f88a2d0298f64a5ec7e6d32b 413 SUPERFAMILY SSF55021 336 412 2.56E-15 T 05-07-2017 AC028_RS17880 3d7ee7a8f88a2d0298f64a5ec7e6d32b 413 Gene3D G3DSA:3.40.50.720 11 121 2.5E-35 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS01220 af011ff21343fb39d4d25bbdeb551e99 814 Pfam PF00905 Penicillin binding protein transpeptidase domain 441 688 3.0E-17 T 05-07-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AC028_RS01220 af011ff21343fb39d4d25bbdeb551e99 814 Gene3D G3DSA:3.40.710.10 349 745 9.2E-92 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS01220 af011ff21343fb39d4d25bbdeb551e99 814 Pfam PF00912 Transglycosylase 167 346 3.6E-53 T 05-07-2017 IPR001264 Glycosyl transferase, family 51 AC028_RS01220 af011ff21343fb39d4d25bbdeb551e99 814 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 31 761 6.3E-287 T 05-07-2017 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AC028_RS01220 af011ff21343fb39d4d25bbdeb551e99 814 Gene3D G3DSA:3.30.2060.10 76 162 2.4E-12 T 05-07-2017 AC028_RS01220 af011ff21343fb39d4d25bbdeb551e99 814 SUPERFAMILY SSF56601 380 769 4.17E-98 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS01220 af011ff21343fb39d4d25bbdeb551e99 814 SUPERFAMILY SSF56601 328 350 4.17E-98 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS01220 af011ff21343fb39d4d25bbdeb551e99 814 Pfam PF14814 Bifunctional transglycosylase second domain 76 160 1.7E-19 T 05-07-2017 IPR028166 Bifunctional transglycosylase second domain KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AC028_RS01220 af011ff21343fb39d4d25bbdeb551e99 814 Gene3D G3DSA:1.10.3810.10 171 348 1.5E-56 T 05-07-2017 AC028_RS01220 af011ff21343fb39d4d25bbdeb551e99 814 PIRSF PIRSF002799 3 795 2.1E-282 T 05-07-2017 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AC028_RS01220 af011ff21343fb39d4d25bbdeb551e99 814 SUPERFAMILY SSF53955 167 368 2.39E-57 T 05-07-2017 IPR023346 Lysozyme-like domain AC028_RS02175 feeb85bad079daa6920f6c37661570ce 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 54.597 T 05-07-2017 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AC028_RS02175 feeb85bad079daa6920f6c37661570ce 302 PIRSF PIRSF002936 2 302 2.5E-144 T 05-07-2017 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AC028_RS02175 feeb85bad079daa6920f6c37661570ce 302 SUPERFAMILY SSF52402 6 209 2.3E-68 T 05-07-2017 AC028_RS02175 feeb85bad079daa6920f6c37661570ce 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 3.7E-146 T 05-07-2017 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AC028_RS02175 feeb85bad079daa6920f6c37661570ce 302 Gene3D G3DSA:3.40.50.620 244 253 2.9E-56 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS02175 feeb85bad079daa6920f6c37661570ce 302 Gene3D G3DSA:3.40.50.620 7 210 2.9E-56 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS02175 feeb85bad079daa6920f6c37661570ce 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 30 257 2.2E-56 T 05-07-2017 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AC028_RS12605 0296a0104618e31ccbc8a6a9446a03b4 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.8E-15 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12605 0296a0104618e31ccbc8a6a9446a03b4 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.8E-15 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12605 0296a0104618e31ccbc8a6a9446a03b4 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.8E-15 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12605 0296a0104618e31ccbc8a6a9446a03b4 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.8E-15 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12605 0296a0104618e31ccbc8a6a9446a03b4 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.8E-15 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12605 0296a0104618e31ccbc8a6a9446a03b4 326 Gene3D G3DSA:3.40.50.720 9 259 1.3E-52 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS12605 0296a0104618e31ccbc8a6a9446a03b4 326 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.7E-5 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12605 0296a0104618e31ccbc8a6a9446a03b4 326 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.7E-5 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12605 0296a0104618e31ccbc8a6a9446a03b4 326 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.7E-5 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12605 0296a0104618e31ccbc8a6a9446a03b4 326 Pfam PF00106 short chain dehydrogenase 8 193 2.7E-43 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12605 0296a0104618e31ccbc8a6a9446a03b4 326 SUPERFAMILY SSF51735 7 263 7.23E-57 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS12965 50d4ec98d6737ec6e2fafa56fe37682c 156 Pfam PF04314 Protein of unknown function (DUF461) 37 144 1.3E-28 T 05-07-2017 IPR007410 DR1885-like metal-binding protein AC028_RS12965 50d4ec98d6737ec6e2fafa56fe37682c 156 SUPERFAMILY SSF110087 14 154 6.8E-36 T 05-07-2017 IPR007410 DR1885-like metal-binding protein AC028_RS19310 a8e68f00c1f5308149a7cb7381f69758 199 Gene3D G3DSA:2.60.300.12 1 99 5.7E-10 T 05-07-2017 IPR000361 FeS cluster biogenesis AC028_RS19310 a8e68f00c1f5308149a7cb7381f69758 199 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 123 179 3.0E-26 T 05-07-2017 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AC028_RS19310 a8e68f00c1f5308149a7cb7381f69758 199 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 100 5.2E-5 T 05-07-2017 IPR000361 FeS cluster biogenesis AC028_RS19310 a8e68f00c1f5308149a7cb7381f69758 199 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 193 39.557 T 05-07-2017 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AC028_RS19310 a8e68f00c1f5308149a7cb7381f69758 199 SUPERFAMILY SSF89360 1 99 6.08E-15 T 05-07-2017 IPR000361 FeS cluster biogenesis AC028_RS19310 a8e68f00c1f5308149a7cb7381f69758 199 SUPERFAMILY SSF117916 103 186 1.4E-22 T 05-07-2017 AC028_RS19310 a8e68f00c1f5308149a7cb7381f69758 199 Pfam PF01106 NifU-like domain 115 179 1.3E-19 T 05-07-2017 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AC028_RS07050 b1e12a016a814995e647bae9220a9c62 222 SUPERFAMILY SSF74653 143 219 8.24E-22 T 05-07-2017 AC028_RS07050 b1e12a016a814995e647bae9220a9c62 222 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 145 222 1.5E-25 T 05-07-2017 IPR006260 TonB, C-terminal GO:0006810 AC028_RS07050 b1e12a016a814995e647bae9220a9c62 222 PRINTS PR01374 Gram-negative bacterial tonB protein signature 160 178 2.7E-7 T 05-07-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AC028_RS07050 b1e12a016a814995e647bae9220a9c62 222 PRINTS PR01374 Gram-negative bacterial tonB protein signature 68 78 2.7E-7 T 05-07-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AC028_RS07050 b1e12a016a814995e647bae9220a9c62 222 PRINTS PR01374 Gram-negative bacterial tonB protein signature 139 160 2.7E-7 T 05-07-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AC028_RS07050 b1e12a016a814995e647bae9220a9c62 222 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 144 221 1.2E-22 T 05-07-2017 IPR006260 TonB, C-terminal GO:0006810 AC028_RS07050 b1e12a016a814995e647bae9220a9c62 222 Gene3D G3DSA:3.30.1150.10 136 221 2.2E-15 T 05-07-2017 AC028_RS05280 e70e4de98a8acd41dc58f44e35a377d1 210 SUPERFAMILY SSF52540 1 208 1.31E-32 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS05280 e70e4de98a8acd41dc58f44e35a377d1 210 Gene3D G3DSA:3.40.50.300 3 207 5.3E-33 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS05280 e70e4de98a8acd41dc58f44e35a377d1 210 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 154 1.6E-17 T 05-07-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AC028_RS05280 e70e4de98a8acd41dc58f44e35a377d1 210 PIRSF PIRSF009320 1 206 2.5E-28 T 05-07-2017 AC028_RS12735 dc09e17db0ee00c19a4ca792d81c077f 281 Pfam PF13557 Putative MetA-pathway of phenol degradation 45 281 1.3E-23 T 05-07-2017 IPR025737 MetA-pathway of phenol degradation, putative AC028_RS09865 74dd57887da40ecdba949c3fb12726bb 700 Gene3D G3DSA:3.40.50.1820 437 682 1.0E-34 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS09865 74dd57887da40ecdba949c3fb12726bb 700 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 467 485 3.8E-47 T 05-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AC028_RS09865 74dd57887da40ecdba949c3fb12726bb 700 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 493 517 3.8E-47 T 05-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AC028_RS09865 74dd57887da40ecdba949c3fb12726bb 700 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 627 649 3.8E-47 T 05-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AC028_RS09865 74dd57887da40ecdba949c3fb12726bb 700 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 521 540 3.8E-47 T 05-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AC028_RS09865 74dd57887da40ecdba949c3fb12726bb 700 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 551 571 3.8E-47 T 05-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AC028_RS09865 74dd57887da40ecdba949c3fb12726bb 700 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 609 624 3.8E-47 T 05-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AC028_RS09865 74dd57887da40ecdba949c3fb12726bb 700 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 15 425 7.8E-114 T 05-07-2017 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AC028_RS09865 74dd57887da40ecdba949c3fb12726bb 700 Pfam PF00326 Prolyl oligopeptidase family 484 698 1.3E-66 T 05-07-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AC028_RS09865 74dd57887da40ecdba949c3fb12726bb 700 SUPERFAMILY SSF53474 435 695 7.94E-42 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS09865 74dd57887da40ecdba949c3fb12726bb 700 SUPERFAMILY SSF50993 11 429 2.51E-82 T 05-07-2017 AC028_RS09865 74dd57887da40ecdba949c3fb12726bb 700 Gene3D G3DSA:2.130.10.120 85 427 1.8E-100 T 05-07-2017 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AC028_RS21160 0eaa05d0b04b82361be6b7a189704168 178 SUPERFAMILY SSF50814 21 172 1.06E-39 T 05-07-2017 IPR011038 Calycin-like AC028_RS21160 0eaa05d0b04b82361be6b7a189704168 178 ProSitePatterns PS00213 Lipocalin signature. 31 42 - T 05-07-2017 IPR022272 Lipocalin family conserved site AC028_RS21160 0eaa05d0b04b82361be6b7a189704168 178 Gene3D G3DSA:2.40.128.20 9 172 6.7E-48 T 05-07-2017 IPR012674 Calycin AC028_RS21160 0eaa05d0b04b82361be6b7a189704168 178 PRINTS PR01171 Bacterial lipocalin signature 123 131 3.4E-7 T 05-07-2017 IPR002446 Lipocalin, bacterial GO:0005215 AC028_RS21160 0eaa05d0b04b82361be6b7a189704168 178 PRINTS PR01171 Bacterial lipocalin signature 138 149 3.4E-7 T 05-07-2017 IPR002446 Lipocalin, bacterial GO:0005215 AC028_RS21160 0eaa05d0b04b82361be6b7a189704168 178 PRINTS PR01171 Bacterial lipocalin signature 30 44 3.4E-7 T 05-07-2017 IPR002446 Lipocalin, bacterial GO:0005215 AC028_RS21160 0eaa05d0b04b82361be6b7a189704168 178 PRINTS PR01171 Bacterial lipocalin signature 165 175 3.4E-7 T 05-07-2017 IPR002446 Lipocalin, bacterial GO:0005215 AC028_RS21160 0eaa05d0b04b82361be6b7a189704168 178 PIRSF PIRSF036893 1 177 3.9E-61 T 05-07-2017 IPR022271 Lipocalin, ApoD type AC028_RS21160 0eaa05d0b04b82361be6b7a189704168 178 Pfam PF08212 Lipocalin-like domain 30 174 3.2E-52 T 05-07-2017 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AC028_RS19165 812b5399c7b5406a8cfc30c6ce3b1634 354 SUPERFAMILY SSF51735 320 339 2.48E-27 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS19165 812b5399c7b5406a8cfc30c6ce3b1634 354 SUPERFAMILY SSF51735 5 279 2.48E-27 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS19165 812b5399c7b5406a8cfc30c6ce3b1634 354 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 209 1.2E-8 T 05-07-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AC028_RS19165 812b5399c7b5406a8cfc30c6ce3b1634 354 Gene3D G3DSA:3.40.50.720 4 261 2.3E-18 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS15775 1cfe6649ccd5298d33c9fe396cb7c405 272 Gene3D G3DSA:3.40.50.720 25 233 2.4E-21 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS15775 1cfe6649ccd5298d33c9fe396cb7c405 272 Pfam PF00106 short chain dehydrogenase 25 199 5.7E-10 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS15775 1cfe6649ccd5298d33c9fe396cb7c405 272 SUPERFAMILY SSF51735 26 235 9.14E-24 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS21740 3c6768eba26b308c579e0ddf97dec502 367 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 05-07-2017 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AC028_RS21740 3c6768eba26b308c579e0ddf97dec502 367 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 34.954 T 05-07-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AC028_RS21740 3c6768eba26b308c579e0ddf97dec502 367 SUPERFAMILY SSF103263 4 351 2.88E-140 T 05-07-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AC028_RS21740 3c6768eba26b308c579e0ddf97dec502 367 Pfam PF01264 Chorismate synthase 10 345 1.2E-130 T 05-07-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AC028_RS21740 3c6768eba26b308c579e0ddf97dec502 367 PIRSF PIRSF001456 3 361 6.5E-130 T 05-07-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AC028_RS21740 3c6768eba26b308c579e0ddf97dec502 367 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 05-07-2017 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AC028_RS21740 3c6768eba26b308c579e0ddf97dec502 367 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.7E-132 T 05-07-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AC028_RS21740 3c6768eba26b308c579e0ddf97dec502 367 Gene3D G3DSA:3.60.150.10 9 352 5.3E-147 T 05-07-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AC028_RS21740 3c6768eba26b308c579e0ddf97dec502 367 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 05-07-2017 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AC028_RS06985 19abfb683dc906eb909252bc8a9a976d 446 Gene3D G3DSA:3.40.50.300 286 362 3.9E-6 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06985 19abfb683dc906eb909252bc8a9a976d 446 Gene3D G3DSA:3.30.1360.120 3 121 2.6E-41 T 05-07-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AC028_RS06985 19abfb683dc906eb909252bc8a9a976d 446 Pfam PF01926 50S ribosome-binding GTPase 219 311 8.2E-23 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS06985 19abfb683dc906eb909252bc8a9a976d 446 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 219 239 7.4E-5 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS06985 19abfb683dc906eb909252bc8a9a976d 446 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 268 283 7.4E-5 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS06985 19abfb683dc906eb909252bc8a9a976d 446 Gene3D G3DSA:1.20.120.430 122 182 3.5E-50 T 05-07-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 AC028_RS06985 19abfb683dc906eb909252bc8a9a976d 446 Gene3D G3DSA:1.20.120.430 247 271 3.5E-50 T 05-07-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 AC028_RS06985 19abfb683dc906eb909252bc8a9a976d 446 Gene3D G3DSA:1.20.120.430 377 446 3.5E-50 T 05-07-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 AC028_RS06985 19abfb683dc906eb909252bc8a9a976d 446 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 14 446 3.0E-97 T 05-07-2017 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AC028_RS06985 19abfb683dc906eb909252bc8a9a976d 446 Pfam PF12631 MnmE helical domain 123 443 1.9E-48 T 05-07-2017 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 AC028_RS06985 19abfb683dc906eb909252bc8a9a976d 446 Pfam PF10396 GTP-binding protein TrmE N-terminus 7 120 2.6E-36 T 05-07-2017 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 AC028_RS06985 19abfb683dc906eb909252bc8a9a976d 446 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 220 336 1.8E-21 T 05-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AC028_RS06985 19abfb683dc906eb909252bc8a9a976d 446 SUPERFAMILY SSF52540 72 149 6.37E-41 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06985 19abfb683dc906eb909252bc8a9a976d 446 SUPERFAMILY SSF52540 185 359 6.37E-41 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06985 19abfb683dc906eb909252bc8a9a976d 446 Gene3D G3DSA:3.40.50.300 218 246 6.3E-6 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06985 19abfb683dc906eb909252bc8a9a976d 446 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 6 446 31.303 T 05-07-2017 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AC028_RS03335 d2cddf1f53d1251b7c2d19a0b69c7272 959 Pfam PF00593 TonB dependent receptor 610 957 2.5E-30 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS03335 d2cddf1f53d1251b7c2d19a0b69c7272 959 Gene3D G3DSA:2.40.170.20 507 642 9.2E-94 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS03335 d2cddf1f53d1251b7c2d19a0b69c7272 959 Gene3D G3DSA:2.40.170.20 320 365 9.2E-94 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS03335 d2cddf1f53d1251b7c2d19a0b69c7272 959 Gene3D G3DSA:2.40.170.20 679 959 9.2E-94 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS03335 d2cddf1f53d1251b7c2d19a0b69c7272 959 Gene3D G3DSA:2.40.170.20 411 456 9.2E-94 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS03335 d2cddf1f53d1251b7c2d19a0b69c7272 959 Gene3D G3DSA:2.40.170.20 184 270 9.2E-94 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS03335 d2cddf1f53d1251b7c2d19a0b69c7272 959 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 180 2.1E-22 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS03335 d2cddf1f53d1251b7c2d19a0b69c7272 959 SUPERFAMILY SSF56935 692 744 1.65E-104 T 05-07-2017 AC028_RS03335 d2cddf1f53d1251b7c2d19a0b69c7272 959 SUPERFAMILY SSF56935 401 639 1.65E-104 T 05-07-2017 AC028_RS03335 d2cddf1f53d1251b7c2d19a0b69c7272 959 SUPERFAMILY SSF56935 774 959 1.65E-104 T 05-07-2017 AC028_RS03335 d2cddf1f53d1251b7c2d19a0b69c7272 959 SUPERFAMILY SSF56935 31 240 1.65E-104 T 05-07-2017 AC028_RS03335 d2cddf1f53d1251b7c2d19a0b69c7272 959 SUPERFAMILY SSF56935 321 372 1.65E-104 T 05-07-2017 AC028_RS03335 d2cddf1f53d1251b7c2d19a0b69c7272 959 Gene3D G3DSA:2.170.130.10 57 183 8.6E-32 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS07140 c07acc73f0724eff17255d1219da582a 598 Gene3D G3DSA:3.40.630.10 321 555 2.5E-59 T 05-07-2017 AC028_RS07140 c07acc73f0724eff17255d1219da582a 598 Gene3D G3DSA:3.40.630.10 40 110 2.5E-59 T 05-07-2017 AC028_RS07140 c07acc73f0724eff17255d1219da582a 598 SUPERFAMILY SSF52025 153 280 8.37E-5 T 05-07-2017 AC028_RS07140 c07acc73f0724eff17255d1219da582a 598 SUPERFAMILY SSF53187 304 547 3.06E-63 T 05-07-2017 AC028_RS07140 c07acc73f0724eff17255d1219da582a 598 SUPERFAMILY SSF53187 51 98 3.06E-63 T 05-07-2017 AC028_RS07140 c07acc73f0724eff17255d1219da582a 598 Gene3D G3DSA:3.50.30.30 153 320 7.9E-4 T 05-07-2017 AC028_RS07140 c07acc73f0724eff17255d1219da582a 598 Pfam PF04389 Peptidase family M28 320 535 9.0E-50 T 05-07-2017 IPR007484 Peptidase M28 AC028_RS15205 9ad543d3affc9f96f5b7c7c834489d53 295 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 290 1.5E-153 T 05-07-2017 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 AC028_RS15205 9ad543d3affc9f96f5b7c7c834489d53 295 SUPERFAMILY SSF53448 4 289 8.34E-90 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS15205 9ad543d3affc9f96f5b7c7c834489d53 295 Pfam PF00483 Nucleotidyl transferase 5 241 1.2E-69 T 05-07-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AC028_RS15205 9ad543d3affc9f96f5b7c7c834489d53 295 Gene3D G3DSA:3.90.550.10 3 266 4.4E-65 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS18335 f0ad6d35347652ad7a9e524688a2efd5 255 Gene3D G3DSA:1.10.601.10 21 91 3.3E-15 T 05-07-2017 AC028_RS18335 f0ad6d35347652ad7a9e524688a2efd5 255 Gene3D G3DSA:1.10.10.10 178 242 8.3E-13 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS18335 f0ad6d35347652ad7a9e524688a2efd5 255 SUPERFAMILY SSF88659 170 241 2.06E-19 T 05-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS18335 f0ad6d35347652ad7a9e524688a2efd5 255 SUPERFAMILY SSF88659 97 163 3.18E-11 T 05-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS18335 f0ad6d35347652ad7a9e524688a2efd5 255 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 25 242 2.4E-80 T 05-07-2017 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AC028_RS18335 f0ad6d35347652ad7a9e524688a2efd5 255 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 10 244 64.846 T 05-07-2017 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AC028_RS18335 f0ad6d35347652ad7a9e524688a2efd5 255 PIRSF PIRSF000770 1 246 4.4E-40 T 05-07-2017 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 AC028_RS18335 f0ad6d35347652ad7a9e524688a2efd5 255 PRINTS PR00046 Major sigma-70 factor signature 226 237 2.4E-11 T 05-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS18335 f0ad6d35347652ad7a9e524688a2efd5 255 PRINTS PR00046 Major sigma-70 factor signature 211 226 2.4E-11 T 05-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS18335 f0ad6d35347652ad7a9e524688a2efd5 255 PRINTS PR00046 Major sigma-70 factor signature 51 64 2.4E-11 T 05-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS18335 f0ad6d35347652ad7a9e524688a2efd5 255 PRINTS PR00046 Major sigma-70 factor signature 194 206 2.4E-11 T 05-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS18335 f0ad6d35347652ad7a9e524688a2efd5 255 Pfam PF04539 Sigma-70 region 3 107 177 8.9E-13 T 05-07-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS18335 f0ad6d35347652ad7a9e524688a2efd5 255 Pfam PF04542 Sigma-70 region 2 25 96 3.4E-17 T 05-07-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS18335 f0ad6d35347652ad7a9e524688a2efd5 255 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 240 2.7E-33 T 05-07-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS18335 f0ad6d35347652ad7a9e524688a2efd5 255 Pfam PF04545 Sigma-70, region 4 190 238 1.7E-17 T 05-07-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS18335 f0ad6d35347652ad7a9e524688a2efd5 255 Gene3D G3DSA:1.10.10.10 96 144 4.4E-6 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS18335 f0ad6d35347652ad7a9e524688a2efd5 255 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 211 237 - T 05-07-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS18335 f0ad6d35347652ad7a9e524688a2efd5 255 SUPERFAMILY SSF88946 20 96 2.88E-24 T 05-07-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 Gene3D G3DSA:3.40.50.140 1 136 8.6E-44 T 05-07-2017 IPR006171 Toprim domain AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 488 502 6.8E-37 T 05-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 303 312 6.8E-37 T 05-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 166 184 6.8E-37 T 05-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 6.8E-37 T 05-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 381 397 6.8E-37 T 05-07-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 SUPERFAMILY SSF56712 3 576 1.96E-187 T 05-07-2017 IPR023405 DNA topoisomerase, type IA, core domain AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 Pfam PF01751 Toprim domain 5 117 3.0E-26 T 05-07-2017 IPR006171 Toprim domain AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 Pfam PF13368 Topoisomerase C-terminal repeat 594 654 8.4E-14 T 05-07-2017 IPR025589 Topoisomerase C-terminal repeat AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 Pfam PF13368 Topoisomerase C-terminal repeat 657 704 3.9E-12 T 05-07-2017 IPR025589 Topoisomerase C-terminal repeat AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 Pfam PF13368 Topoisomerase C-terminal repeat 714 759 6.8E-13 T 05-07-2017 IPR025589 Topoisomerase C-terminal repeat AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 Pfam PF01131 DNA topoisomerase 135 562 5.2E-130 T 05-07-2017 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 SMART SM00436 108 196 8.1E-47 T 05-07-2017 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 Gene3D G3DSA:2.70.20.10 328 464 1.7E-37 T 05-07-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 Gene3D G3DSA:2.70.20.10 190 325 6.4E-32 T 05-07-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 618 1.2E-224 T 05-07-2017 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 681 54.049 T 05-07-2017 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 Gene3D G3DSA:1.10.460.10 137 189 5.8E-60 T 05-07-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 Gene3D G3DSA:1.10.460.10 465 576 5.8E-60 T 05-07-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 SMART SM00437 252 525 2.6E-114 T 05-07-2017 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 289 312 - T 05-07-2017 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AC028_RS13980 844c144a14daef8c22b5442b163d2c93 830 SMART SM00493 3 103 3.3E-32 T 05-07-2017 IPR006171 Toprim domain AC028_RS02320 e1000d29e0b1e580a7dbbfa68ada745a 258 PIRSF PIRSF004846 3 258 1.2E-69 T 05-07-2017 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 AC028_RS02320 e1000d29e0b1e580a7dbbfa68ada745a 258 Gene3D G3DSA:3.40.190.10 29 118 2.1E-17 T 05-07-2017 AC028_RS02320 e1000d29e0b1e580a7dbbfa68ada745a 258 Gene3D G3DSA:3.40.190.10 218 254 2.1E-17 T 05-07-2017 AC028_RS02320 e1000d29e0b1e580a7dbbfa68ada745a 258 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 34 251 1.1E-59 T 05-07-2017 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 AC028_RS02320 e1000d29e0b1e580a7dbbfa68ada745a 258 SUPERFAMILY SSF53850 28 254 4.3E-65 T 05-07-2017 AC028_RS02320 e1000d29e0b1e580a7dbbfa68ada745a 258 Gene3D G3DSA:3.40.190.10 119 217 6.0E-39 T 05-07-2017 AC028_RS02320 e1000d29e0b1e580a7dbbfa68ada745a 258 Pfam PF13531 Bacterial extracellular solute-binding protein 29 254 6.5E-46 T 05-07-2017 AC028_RS02040 654fb169e9c8931dc311d4006fe17a15 143 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 134 3.0E-40 T 05-07-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AC028_RS02040 654fb169e9c8931dc311d4006fe17a15 143 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 133 2.1E-44 T 05-07-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AC028_RS02040 654fb169e9c8931dc311d4006fe17a15 143 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 136 26.259 T 05-07-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AC028_RS02040 654fb169e9c8931dc311d4006fe17a15 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 89 97 2.9E-13 T 05-07-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AC028_RS02040 654fb169e9c8931dc311d4006fe17a15 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 98 107 2.9E-13 T 05-07-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AC028_RS02040 654fb169e9c8931dc311d4006fe17a15 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 2.9E-13 T 05-07-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AC028_RS02040 654fb169e9c8931dc311d4006fe17a15 143 SUPERFAMILY SSF81330 12 129 5.1E-36 T 05-07-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AC028_RS02040 654fb169e9c8931dc311d4006fe17a15 143 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 05-07-2017 IPR019823 Large-conductance mechanosensitive channel, conserved site AC028_RS01815 36183d4c32202571560b0fde0464cf0c 331 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 05-07-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS01815 36183d4c32202571560b0fde0464cf0c 331 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 22 319 1.8E-93 T 05-07-2017 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS01815 36183d4c32202571560b0fde0464cf0c 331 Gene3D G3DSA:3.10.290.10 26 73 1.6E-4 T 05-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AC028_RS01815 36183d4c32202571560b0fde0464cf0c 331 Pfam PF00849 RNA pseudouridylate synthase 99 248 5.3E-34 T 05-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS01815 36183d4c32202571560b0fde0464cf0c 331 SUPERFAMILY SSF55174 25 75 3.06E-5 T 05-07-2017 AC028_RS01815 36183d4c32202571560b0fde0464cf0c 331 SUPERFAMILY SSF55120 84 321 4.52E-76 T 05-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS17340 c87fc1952f2905ab081e7ed657b3e4c9 327 SUPERFAMILY SSF52540 10 154 4.38E-21 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS17340 c87fc1952f2905ab081e7ed657b3e4c9 327 Gene3D G3DSA:3.40.50.300 8 175 4.2E-51 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS17340 c87fc1952f2905ab081e7ed657b3e4c9 327 Gene3D G3DSA:1.10.287.890 205 291 1.1E-27 T 05-07-2017 AC028_RS17340 c87fc1952f2905ab081e7ed657b3e4c9 327 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 9 312 28.848 T 05-07-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AC028_RS17340 c87fc1952f2905ab081e7ed657b3e4c9 327 Pfam PF01715 IPP transferase 43 292 2.0E-80 T 05-07-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AC028_RS17340 c87fc1952f2905ab081e7ed657b3e4c9 327 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 10 302 4.4E-88 T 05-07-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AC028_RS14080 04185f26b6c4a036eab6451c6bbfef73 146 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 1.8E-49 T 05-07-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 AC028_RS14080 04185f26b6c4a036eab6451c6bbfef73 146 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 144 7.4E-50 T 05-07-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 AC028_RS14080 04185f26b6c4a036eab6451c6bbfef73 146 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 146 33.572 T 05-07-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 AC028_RS14080 04185f26b6c4a036eab6451c6bbfef73 146 Gene3D G3DSA:3.50.80.10 1 144 1.2E-52 T 05-07-2017 IPR023509 D-Tyr tRNAtyr deacylase-like domain AC028_RS14080 04185f26b6c4a036eab6451c6bbfef73 146 SUPERFAMILY SSF69500 1 144 2.49E-51 T 05-07-2017 IPR023509 D-Tyr tRNAtyr deacylase-like domain AC028_RS07370 2bc36eced2004548dbfeb1ca09e2b11a 357 ProSitePatterns PS00211 ABC transporters family signature. 282 296 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS07370 2bc36eced2004548dbfeb1ca09e2b11a 357 SUPERFAMILY SSF52540 141 351 1.14E-61 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07370 2bc36eced2004548dbfeb1ca09e2b11a 357 Gene3D G3DSA:3.40.50.300 145 351 5.1E-61 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07370 2bc36eced2004548dbfeb1ca09e2b11a 357 Pfam PF00005 ABC transporter 162 310 1.8E-30 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS07370 2bc36eced2004548dbfeb1ca09e2b11a 357 SUPERFAMILY SSF90123 3 127 6.15E-16 T 05-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AC028_RS07370 2bc36eced2004548dbfeb1ca09e2b11a 357 Gene3D G3DSA:1.20.1560.10 2 129 8.9E-16 T 05-07-2017 AC028_RS07370 2bc36eced2004548dbfeb1ca09e2b11a 357 SMART SM00382 170 354 2.5E-19 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS07370 2bc36eced2004548dbfeb1ca09e2b11a 357 Pfam PF00664 ABC transporter transmembrane region 8 98 1.4E-6 T 05-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AC028_RS10350 29ade89f5a747f1ba3c247c95aa99e9f 214 Pfam PF01926 50S ribosome-binding GTPase 27 134 2.6E-18 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS10350 29ade89f5a747f1ba3c247c95aa99e9f 214 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 13 197 26.187 T 05-07-2017 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AC028_RS10350 29ade89f5a747f1ba3c247c95aa99e9f 214 Gene3D G3DSA:3.40.50.300 6 191 6.7E-40 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10350 29ade89f5a747f1ba3c247c95aa99e9f 214 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 9 191 6.1E-68 T 05-07-2017 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AC028_RS10350 29ade89f5a747f1ba3c247c95aa99e9f 214 SUPERFAMILY SSF52540 16 195 1.83E-33 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11105 a4e1034976d67e98375f09a9326c9b2d 185 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 28 178 2.0E-73 T 05-07-2017 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AC028_RS11105 a4e1034976d67e98375f09a9326c9b2d 185 Pfam PF01923 Cobalamin adenosyltransferase 8 166 1.0E-56 T 05-07-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AC028_RS11105 a4e1034976d67e98375f09a9326c9b2d 185 Gene3D G3DSA:1.20.1200.10 18 181 7.6E-63 T 05-07-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AC028_RS11105 a4e1034976d67e98375f09a9326c9b2d 185 SUPERFAMILY SSF89028 7 179 4.51E-58 T 05-07-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AC028_RS11105 a4e1034976d67e98375f09a9326c9b2d 185 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 179 3.8E-57 T 05-07-2017 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AC028_RS07000 86e7c075a86c02b581f0cc52c31f025d 145 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 62 109 1.0E-20 T 05-07-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AC028_RS07000 86e7c075a86c02b581f0cc52c31f025d 145 SUPERFAMILY SSF54211 10 116 1.04E-24 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS07000 86e7c075a86c02b581f0cc52c31f025d 145 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 14 116 1.3E-18 T 05-07-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AC028_RS07000 86e7c075a86c02b581f0cc52c31f025d 145 Gene3D G3DSA:3.30.230.10 9 117 2.0E-28 T 05-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_RS07000 86e7c075a86c02b581f0cc52c31f025d 145 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 59 73 - T 05-07-2017 IPR020539 Ribonuclease P, conserved site GO:0004526 AC028_RS07000 86e7c075a86c02b581f0cc52c31f025d 145 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 10 118 17.929 T 05-07-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AC028_RS07000 86e7c075a86c02b581f0cc52c31f025d 145 Pfam PF00825 Ribonuclease P 10 115 5.6E-25 T 05-07-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AC028_RS07755 5f1be128b9bc48daaf5fa8c870fc249d 497 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 492 1.0E-189 T 05-07-2017 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AC028_RS07755 5f1be128b9bc48daaf5fa8c870fc249d 497 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 18 492 8.5E-217 T 05-07-2017 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AC028_RS07085 dad9b744333c412d65be9af2e0977936 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 19 486 2.1E-117 T 05-07-2017 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 AC028_RS07085 dad9b744333c412d65be9af2e0977936 486 SMART SM00155 219 246 0.028 T 05-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AC028_RS07085 dad9b744333c412d65be9af2e0977936 486 SMART SM00155 400 427 2.2E-4 T 05-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AC028_RS07085 dad9b744333c412d65be9af2e0977936 486 Gene3D G3DSA:3.30.870.10 320 462 1.2E-36 T 05-07-2017 AC028_RS07085 dad9b744333c412d65be9af2e0977936 486 SUPERFAMILY SSF56024 74 317 4.08E-47 T 05-07-2017 AC028_RS07085 dad9b744333c412d65be9af2e0977936 486 Gene3D G3DSA:3.30.870.10 112 319 2.5E-48 T 05-07-2017 AC028_RS07085 dad9b744333c412d65be9af2e0977936 486 Pfam PF13091 PLD-like domain 134 247 3.4E-17 T 05-07-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 AC028_RS07085 dad9b744333c412d65be9af2e0977936 486 Pfam PF13091 PLD-like domain 328 448 2.1E-24 T 05-07-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 AC028_RS07085 dad9b744333c412d65be9af2e0977936 486 SUPERFAMILY SSF56024 270 463 2.47E-43 T 05-07-2017 AC028_RS07565 6e847155da04201d18a36c761a57dee4 222 Pfam PF00072 Response regulator receiver domain 5 114 8.2E-22 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS07565 6e847155da04201d18a36c761a57dee4 222 SUPERFAMILY SSF46894 141 206 3.13E-19 T 05-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AC028_RS07565 6e847155da04201d18a36c761a57dee4 222 SUPERFAMILY SSF52172 2 133 1.08E-26 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS07565 6e847155da04201d18a36c761a57dee4 222 SMART SM00421 147 204 1.4E-23 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS07565 6e847155da04201d18a36c761a57dee4 222 Gene3D G3DSA:1.10.10.10 137 206 4.2E-24 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS07565 6e847155da04201d18a36c761a57dee4 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 9.2E-19 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS07565 6e847155da04201d18a36c761a57dee4 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS07565 6e847155da04201d18a36c761a57dee4 222 SMART SM00448 2 116 3.5E-20 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS07565 6e847155da04201d18a36c761a57dee4 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.3E-10 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS07565 6e847155da04201d18a36c761a57dee4 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.3E-10 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS07565 6e847155da04201d18a36c761a57dee4 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.3E-10 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS07565 6e847155da04201d18a36c761a57dee4 222 Gene3D G3DSA:3.40.50.2300 2 127 5.9E-30 T 05-07-2017 AC028_RS04300 92aa6d4163ce9862577466a41e087d5b 429 Gene3D G3DSA:1.10.240.10 211 298 1.9E-27 T 05-07-2017 AC028_RS04300 92aa6d4163ce9862577466a41e087d5b 429 Gene3D G3DSA:3.30.160.160 355 398 1.1E-4 T 05-07-2017 IPR010879 Domain of unknown function DUF1508 AC028_RS04300 92aa6d4163ce9862577466a41e087d5b 429 Pfam PF00579 tRNA synthetases class I (W and Y) 3 283 4.5E-55 T 05-07-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS04300 92aa6d4163ce9862577466a41e087d5b 429 Gene3D G3DSA:3.40.50.620 3 210 1.3E-76 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS04300 92aa6d4163ce9862577466a41e087d5b 429 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 1.1E-20 T 05-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AC028_RS04300 92aa6d4163ce9862577466a41e087d5b 429 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 202 212 1.1E-20 T 05-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AC028_RS04300 92aa6d4163ce9862577466a41e087d5b 429 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 1.1E-20 T 05-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AC028_RS04300 92aa6d4163ce9862577466a41e087d5b 429 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 150 171 1.1E-20 T 05-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AC028_RS04300 92aa6d4163ce9862577466a41e087d5b 429 Pfam PF07411 Domain of unknown function (DUF1508) 361 402 2.0E-4 T 05-07-2017 IPR010879 Domain of unknown function DUF1508 AC028_RS04300 92aa6d4163ce9862577466a41e087d5b 429 SUPERFAMILY SSF52374 4 332 1.81E-78 T 05-07-2017 AC028_RS04300 92aa6d4163ce9862577466a41e087d5b 429 SUPERFAMILY SSF160113 353 403 1.83E-10 T 05-07-2017 IPR010879 Domain of unknown function DUF1508 AC028_RS04300 92aa6d4163ce9862577466a41e087d5b 429 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 1 332 9.3E-88 T 05-07-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AC028_RS04300 92aa6d4163ce9862577466a41e087d5b 429 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 2 333 36.633 T 05-07-2017 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 AC028_RS18945 dd86168cba82a0eb400d5590b9ebb951 330 Gene3D G3DSA:3.30.70.100 203 286 8.7E-23 T 05-07-2017 AC028_RS18945 dd86168cba82a0eb400d5590b9ebb951 330 Pfam PF00924 Mechanosensitive ion channel 92 289 8.8E-49 T 05-07-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AC028_RS18945 dd86168cba82a0eb400d5590b9ebb951 330 Gene3D G3DSA:2.30.30.60 150 199 4.2E-16 T 05-07-2017 AC028_RS18945 dd86168cba82a0eb400d5590b9ebb951 330 SUPERFAMILY SSF82861 50 133 5.23E-18 T 05-07-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AC028_RS18945 dd86168cba82a0eb400d5590b9ebb951 330 SUPERFAMILY SSF50182 134 200 3.6E-16 T 05-07-2017 IPR010920 LSM domain AC028_RS18945 dd86168cba82a0eb400d5590b9ebb951 330 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 164 198 - T 05-07-2017 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AC028_RS18945 dd86168cba82a0eb400d5590b9ebb951 330 SUPERFAMILY SSF82689 203 299 1.31E-26 T 05-07-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AC028_RS00225 7fba95262c4df339ee5bf6502d23f497 155 Gene3D G3DSA:3.30.420.140 11 149 1.2E-39 T 05-07-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 AC028_RS00225 7fba95262c4df339ee5bf6502d23f497 155 SUPERFAMILY SSF53098 11 146 1.52E-31 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS00225 7fba95262c4df339ee5bf6502d23f497 155 Pfam PF03652 Holliday junction resolvase 12 146 2.5E-36 T 05-07-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AC028_RS00225 7fba95262c4df339ee5bf6502d23f497 155 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 11 149 22.124 T 05-07-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AC028_RS00225 7fba95262c4df339ee5bf6502d23f497 155 SMART SM00732 11 111 3.7E-28 T 05-07-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 AC028_RS00225 7fba95262c4df339ee5bf6502d23f497 155 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 14 145 1.6E-29 T 05-07-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AC028_RS19750 b2cd82e1d792399e2d2a2e9846a25592 227 Pfam PF02224 Cytidylate kinase 9 219 7.0E-68 T 05-07-2017 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 AC028_RS19750 b2cd82e1d792399e2d2a2e9846a25592 227 Hamap MF_00238 Cytidylate kinase [cmk]. 6 225 33.061 T 05-07-2017 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 AC028_RS19750 b2cd82e1d792399e2d2a2e9846a25592 227 SUPERFAMILY SSF52540 6 223 1.49E-42 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19750 b2cd82e1d792399e2d2a2e9846a25592 227 Gene3D G3DSA:3.40.50.300 6 221 2.9E-68 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19750 b2cd82e1d792399e2d2a2e9846a25592 227 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 218 1.1E-67 T 05-07-2017 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 AC028_RS17885 f9aeff7afc5bf74e9b7a0d404c4fb760 472 SUPERFAMILY SSF55103 189 461 2.45E-56 T 05-07-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AC028_RS17885 f9aeff7afc5bf74e9b7a0d404c4fb760 472 Gene3D G3DSA:3.30.43.10 7 94 1.1E-24 T 05-07-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AC028_RS17885 f9aeff7afc5bf74e9b7a0d404c4fb760 472 Gene3D G3DSA:3.30.465.10 97 214 2.4E-36 T 05-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AC028_RS17885 f9aeff7afc5bf74e9b7a0d404c4fb760 472 Pfam PF02913 FAD linked oxidases, C-terminal domain 218 459 2.4E-54 T 05-07-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AC028_RS17885 f9aeff7afc5bf74e9b7a0d404c4fb760 472 SUPERFAMILY SSF56176 8 216 2.8E-66 T 05-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AC028_RS17885 f9aeff7afc5bf74e9b7a0d404c4fb760 472 Pfam PF01565 FAD binding domain 40 178 5.1E-38 T 05-07-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AC028_RS17885 f9aeff7afc5bf74e9b7a0d404c4fb760 472 Gene3D G3DSA:1.10.45.10 420 459 2.5E-10 T 05-07-2017 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AC028_RS14525 86f5e47ca3347bf9c3c5303b924e9135 272 PIRSF PIRSF006157 1 262 8.8E-88 T 05-07-2017 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 AC028_RS14525 86f5e47ca3347bf9c3c5303b924e9135 272 Gene3D G3DSA:3.40.830.10 1 261 1.1E-94 T 05-07-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AC028_RS14525 86f5e47ca3347bf9c3c5303b924e9135 272 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 6 240 8.4E-46 T 05-07-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AC028_RS14525 86f5e47ca3347bf9c3c5303b924e9135 272 SUPERFAMILY SSF53213 3 261 1.18E-86 T 05-07-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AC028_RS19520 c050c4c160bcc9cfe981b6efd3139495 232 Pfam PF07081 Protein of unknown function (DUF1349) 48 221 7.2E-61 T 05-07-2017 IPR009784 Protein of unknown function DUF1349 AC028_RS19520 c050c4c160bcc9cfe981b6efd3139495 232 Gene3D G3DSA:2.60.120.200 48 218 2.4E-16 T 05-07-2017 IPR013320 Concanavalin A-like lectin/glucanase domain AC028_RS19520 c050c4c160bcc9cfe981b6efd3139495 232 PIRSF PIRSF022704 35 232 5.6E-71 T 05-07-2017 IPR015987 Uncharacterised conserved protein UCP022704 AC028_RS19520 c050c4c160bcc9cfe981b6efd3139495 232 SUPERFAMILY SSF49899 47 220 3.13E-27 T 05-07-2017 IPR013320 Concanavalin A-like lectin/glucanase domain AC028_RS12005 efdbd078947a8fbc6820c59806df5998 229 SMART SM00862 150 225 6.1E-28 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS12005 efdbd078947a8fbc6820c59806df5998 229 SMART SM00448 3 116 5.0E-41 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS12005 efdbd078947a8fbc6820c59806df5998 229 Gene3D G3DSA:3.40.50.2300 3 127 6.9E-40 T 05-07-2017 AC028_RS12005 efdbd078947a8fbc6820c59806df5998 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 2 226 6.0E-112 T 05-07-2017 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 AC028_RS12005 efdbd078947a8fbc6820c59806df5998 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.4E-25 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS12005 efdbd078947a8fbc6820c59806df5998 229 SUPERFAMILY SSF52172 3 125 2.42E-41 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS12005 efdbd078947a8fbc6820c59806df5998 229 SUPERFAMILY SSF46894 127 225 1.87E-29 T 05-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AC028_RS12005 efdbd078947a8fbc6820c59806df5998 229 Pfam PF00072 Response regulator receiver domain 5 117 1.2E-24 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS12005 efdbd078947a8fbc6820c59806df5998 229 Gene3D G3DSA:1.10.10.10 128 226 1.2E-32 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS20115 c9632b17ee31b5613428ce506abfb4f7 203 Pfam PF13302 Acetyltransferase (GNAT) domain 23 159 5.5E-16 T 05-07-2017 IPR000182 GNAT domain GO:0008080 AC028_RS20115 c9632b17ee31b5613428ce506abfb4f7 203 Gene3D G3DSA:3.40.630.30 8 200 2.7E-57 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS20115 c9632b17ee31b5613428ce506abfb4f7 203 SUPERFAMILY SSF55729 13 184 3.0E-34 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS22005 c35f1e58cc4c033a88734e42dc0edfe7 1036 Gene3D G3DSA:2.40.170.20 295 531 8.6E-60 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS22005 c35f1e58cc4c033a88734e42dc0edfe7 1036 Gene3D G3DSA:2.40.170.20 718 1035 8.6E-60 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS22005 c35f1e58cc4c033a88734e42dc0edfe7 1036 Gene3D G3DSA:2.40.170.20 571 678 8.6E-60 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS22005 c35f1e58cc4c033a88734e42dc0edfe7 1036 Gene3D G3DSA:2.60.40.10 54 106 8.4E-9 T 05-07-2017 IPR013783 Immunoglobulin-like fold AC028_RS22005 c35f1e58cc4c033a88734e42dc0edfe7 1036 SUPERFAMILY SSF49452 46 122 1.22E-8 T 05-07-2017 IPR013784 Carbohydrate-binding-like fold GO:0030246 AC028_RS22005 c35f1e58cc4c033a88734e42dc0edfe7 1036 Pfam PF07715 TonB-dependent Receptor Plug Domain 150 250 6.4E-9 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS22005 c35f1e58cc4c033a88734e42dc0edfe7 1036 SUPERFAMILY SSF56935 311 652 7.94E-74 T 05-07-2017 AC028_RS22005 c35f1e58cc4c033a88734e42dc0edfe7 1036 SUPERFAMILY SSF56935 960 1036 7.94E-74 T 05-07-2017 AC028_RS22005 c35f1e58cc4c033a88734e42dc0edfe7 1036 SUPERFAMILY SSF56935 128 270 7.94E-74 T 05-07-2017 AC028_RS22005 c35f1e58cc4c033a88734e42dc0edfe7 1036 SUPERFAMILY SSF56935 713 757 7.94E-74 T 05-07-2017 AC028_RS22005 c35f1e58cc4c033a88734e42dc0edfe7 1036 SUPERFAMILY SSF56935 809 924 7.94E-74 T 05-07-2017 AC028_RS22005 c35f1e58cc4c033a88734e42dc0edfe7 1036 Pfam PF13620 Carboxypeptidase regulatory-like domain 59 122 2.3E-12 T 05-07-2017 AC028_RS22005 c35f1e58cc4c033a88734e42dc0edfe7 1036 Gene3D G3DSA:2.170.130.10 127 262 9.2E-12 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS03505 24542f81438ccd95e69320a63ac08bc6 416 Pfam PF07690 Major Facilitator Superfamily 20 360 9.8E-38 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS03505 24542f81438ccd95e69320a63ac08bc6 416 SUPERFAMILY SSF103473 9 400 1.44E-52 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS03505 24542f81438ccd95e69320a63ac08bc6 416 Gene3D G3DSA:1.20.1250.20 16 190 2.0E-20 T 05-07-2017 AC028_RS03505 24542f81438ccd95e69320a63ac08bc6 416 Gene3D G3DSA:1.20.1250.20 219 400 3.4E-10 T 05-07-2017 AC028_RS09415 51d06f9996394726e39d0747c7e1da84 329 Pfam PF03211 Pectate lyase 116 294 3.5E-28 T 05-07-2017 IPR004898 Pectate lyase, catalytic GO:0005576|GO:0030570 KEGG: 00040+4.2.2.2 AC028_RS09415 51d06f9996394726e39d0747c7e1da84 329 Gene3D G3DSA:2.160.20.10 115 306 1.1E-48 T 05-07-2017 IPR012334 Pectin lyase fold AC028_RS09415 51d06f9996394726e39d0747c7e1da84 329 SUPERFAMILY SSF51126 112 304 5.5E-41 T 05-07-2017 IPR011050 Pectin lyase fold/virulence factor AC028_RS01480 574b81f28a42202cde66e8709254b2ee 414 Gene3D G3DSA:1.20.1250.20 4 174 2.7E-9 T 05-07-2017 AC028_RS01480 574b81f28a42202cde66e8709254b2ee 414 Gene3D G3DSA:1.20.1250.20 193 369 3.7E-17 T 05-07-2017 AC028_RS01480 574b81f28a42202cde66e8709254b2ee 414 SUPERFAMILY SSF103473 4 378 1.07E-35 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS01480 574b81f28a42202cde66e8709254b2ee 414 Pfam PF07690 Major Facilitator Superfamily 201 371 2.1E-12 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS19965 d872d027a9fa467eae74f48431662484 299 Pfam PF04796 Plasmid encoded RepA protein 91 241 5.0E-26 T 05-07-2017 IPR006881 Plasmid encoded RepA protein AC028_RS06475 c7599f1875aa03d8d0015a52c9132513 319 Gene3D G3DSA:3.40.50.1000 72 299 1.2E-45 T 05-07-2017 IPR023214 HAD-like domain AC028_RS06475 c7599f1875aa03d8d0015a52c9132513 319 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 46 291 5.5E-43 T 05-07-2017 IPR005519 Acid phosphatase, class B-like AC028_RS06475 c7599f1875aa03d8d0015a52c9132513 319 PIRSF PIRSF019271 16 319 1.0E-103 T 05-07-2017 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 AC028_RS06475 c7599f1875aa03d8d0015a52c9132513 319 SUPERFAMILY SSF56784 105 298 4.3E-31 T 05-07-2017 IPR023214 HAD-like domain AC028_RS06475 c7599f1875aa03d8d0015a52c9132513 319 TIGRFAM TIGR01533 lipo_e_P4: 5'-nucleotidase, lipoprotein e(P4) family 45 315 6.4E-65 T 05-07-2017 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 AC028_RS10040 a5cbd2182b97417956537ca3bda39dd0 401 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 47 273 3.5E-80 T 05-07-2017 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AC028_RS10040 a5cbd2182b97417956537ca3bda39dd0 401 Gene3D G3DSA:3.40.710.10 39 292 7.5E-96 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS10040 a5cbd2182b97417956537ca3bda39dd0 401 Gene3D G3DSA:2.60.410.10 293 383 2.6E-30 T 05-07-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AC028_RS10040 a5cbd2182b97417956537ca3bda39dd0 401 SUPERFAMILY SSF69189 293 385 1.18E-26 T 05-07-2017 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AC028_RS10040 a5cbd2182b97417956537ca3bda39dd0 401 SMART SM00936 293 383 7.9E-34 T 05-07-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AC028_RS10040 a5cbd2182b97417956537ca3bda39dd0 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 133 150 1.9E-16 T 05-07-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AC028_RS10040 a5cbd2182b97417956537ca3bda39dd0 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 160 173 1.9E-16 T 05-07-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AC028_RS10040 a5cbd2182b97417956537ca3bda39dd0 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 75 86 1.9E-16 T 05-07-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AC028_RS10040 a5cbd2182b97417956537ca3bda39dd0 401 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 293 383 3.6E-27 T 05-07-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AC028_RS10040 a5cbd2182b97417956537ca3bda39dd0 401 SUPERFAMILY SSF56601 1 293 2.52E-81 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS12460 fccec637ef37659b87d48c105819c53c 237 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 182 3.1E-4 T 05-07-2017 AC028_RS12460 fccec637ef37659b87d48c105819c53c 237 SUPERFAMILY SSF51735 5 234 3.21E-62 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS12460 fccec637ef37659b87d48c105819c53c 237 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 233 1.3E-48 T 05-07-2017 AC028_RS12460 fccec637ef37659b87d48c105819c53c 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 3.8E-7 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12460 fccec637ef37659b87d48c105819c53c 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 3.8E-7 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12460 fccec637ef37659b87d48c105819c53c 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 3.8E-7 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12460 fccec637ef37659b87d48c105819c53c 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 3.5E-32 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12460 fccec637ef37659b87d48c105819c53c 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.5E-32 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12460 fccec637ef37659b87d48c105819c53c 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 3.5E-32 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12460 fccec637ef37659b87d48c105819c53c 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 3.5E-32 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12460 fccec637ef37659b87d48c105819c53c 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 3.5E-32 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12460 fccec637ef37659b87d48c105819c53c 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 3.5E-32 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12460 fccec637ef37659b87d48c105819c53c 237 Gene3D G3DSA:3.40.50.720 3 234 2.6E-61 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS05095 26a62f65184b41b1b9a8bdf4f98e2984 1116 SMART SM00642 30 430 1.1E-107 T 05-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AC028_RS05095 26a62f65184b41b1b9a8bdf4f98e2984 1116 Pfam PF16657 Maltogenic Amylase, C-terminal domain 478 554 2.8E-26 T 05-07-2017 IPR032091 Maltogenic Amylase, C-terminal AC028_RS05095 26a62f65184b41b1b9a8bdf4f98e2984 1116 Gene3D G3DSA:3.90.1200.10 861 981 7.7E-6 T 05-07-2017 AC028_RS05095 26a62f65184b41b1b9a8bdf4f98e2984 1116 SUPERFAMILY SSF51011 482 558 2.34E-17 T 05-07-2017 AC028_RS05095 26a62f65184b41b1b9a8bdf4f98e2984 1116 TIGRFAM TIGR02457 TreS_Cterm: putative maltokinase 575 1106 2.2E-219 T 05-07-2017 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain AC028_RS05095 26a62f65184b41b1b9a8bdf4f98e2984 1116 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 21 558 4.0E-301 T 05-07-2017 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622 AC028_RS05095 26a62f65184b41b1b9a8bdf4f98e2984 1116 Gene3D G3DSA:3.20.20.80 24 121 6.7E-110 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS05095 26a62f65184b41b1b9a8bdf4f98e2984 1116 Gene3D G3DSA:3.20.20.80 457 470 6.7E-110 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS05095 26a62f65184b41b1b9a8bdf4f98e2984 1116 Gene3D G3DSA:3.20.20.80 198 424 6.7E-110 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS05095 26a62f65184b41b1b9a8bdf4f98e2984 1116 Pfam PF00128 Alpha amylase, catalytic domain 45 399 1.5E-77 T 05-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AC028_RS05095 26a62f65184b41b1b9a8bdf4f98e2984 1116 SUPERFAMILY SSF51445 34 478 4.7E-132 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS05095 26a62f65184b41b1b9a8bdf4f98e2984 1116 Gene3D G3DSA:2.60.40.1180 478 558 3.9E-18 T 05-07-2017 IPR013780 Glycosyl hydrolase, all-beta AC028_RS05095 26a62f65184b41b1b9a8bdf4f98e2984 1116 Gene3D G3DSA:3.90.400.10 122 190 5.3E-26 T 05-07-2017 AC028_RS05095 26a62f65184b41b1b9a8bdf4f98e2984 1116 SUPERFAMILY SSF56112 733 836 3.57E-14 T 05-07-2017 IPR011009 Protein kinase-like domain AC028_RS05095 26a62f65184b41b1b9a8bdf4f98e2984 1116 SUPERFAMILY SSF56112 864 1007 3.57E-14 T 05-07-2017 IPR011009 Protein kinase-like domain AC028_RS05095 26a62f65184b41b1b9a8bdf4f98e2984 1116 SUPERFAMILY SSF56112 1038 1060 3.57E-14 T 05-07-2017 IPR011009 Protein kinase-like domain AC028_RS09150 070d153e5bff9fb538b39dc12a0ed6c7 301 Pfam PF04381 Putative exonuclease, RdgC 1 296 3.7E-99 T 05-07-2017 IPR007476 Putative exonuclease, RdgC GO:0006310 AC028_RS09150 070d153e5bff9fb538b39dc12a0ed6c7 301 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 300 40.209 T 05-07-2017 IPR007476 Putative exonuclease, RdgC GO:0006310 AC028_RS03465 2f0395be2173ff3fd3d7faa50f700d76 212 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 149 2.2E-26 T 05-07-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AC028_RS03465 2f0395be2173ff3fd3d7faa50f700d76 212 PIRSF PIRSF009320 1 210 6.0E-51 T 05-07-2017 AC028_RS03465 2f0395be2173ff3fd3d7faa50f700d76 212 Gene3D G3DSA:3.40.50.300 1 210 1.9E-39 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS03465 2f0395be2173ff3fd3d7faa50f700d76 212 SUPERFAMILY SSF52540 1 210 2.18E-42 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS05990 3db150638c5fd21155c42ca0020aec19 426 Pfam PF07690 Major Facilitator Superfamily 34 250 1.1E-21 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS05990 3db150638c5fd21155c42ca0020aec19 426 Gene3D G3DSA:1.20.1250.20 32 208 1.3E-27 T 05-07-2017 AC028_RS05990 3db150638c5fd21155c42ca0020aec19 426 Gene3D G3DSA:1.20.1250.20 230 408 1.5E-17 T 05-07-2017 AC028_RS05990 3db150638c5fd21155c42ca0020aec19 426 SUPERFAMILY SSF103473 26 407 5.36E-58 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS05990 3db150638c5fd21155c42ca0020aec19 426 ProSitePatterns PS00216 Sugar transport proteins signature 1. 84 100 - T 05-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AC028_RS02550 8b13dbd3ce4bc7696258a6c552122674 289 Gene3D G3DSA:1.10.10.10 3 86 6.5E-29 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS02550 8b13dbd3ce4bc7696258a6c552122674 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.6E-8 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS02550 8b13dbd3ce4bc7696258a6c552122674 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.6E-8 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS02550 8b13dbd3ce4bc7696258a6c552122674 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.6E-8 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS02550 8b13dbd3ce4bc7696258a6c552122674 289 Pfam PF03466 LysR substrate binding domain 89 288 6.0E-42 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS02550 8b13dbd3ce4bc7696258a6c552122674 289 SUPERFAMILY SSF46785 2 85 3.02E-23 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS02550 8b13dbd3ce4bc7696258a6c552122674 289 Gene3D G3DSA:3.40.190.10 89 175 1.6E-30 T 05-07-2017 AC028_RS02550 8b13dbd3ce4bc7696258a6c552122674 289 Gene3D G3DSA:3.40.190.10 176 267 1.7E-25 T 05-07-2017 AC028_RS02550 8b13dbd3ce4bc7696258a6c552122674 289 SUPERFAMILY SSF53850 89 288 1.02E-38 T 05-07-2017 AC028_RS02550 8b13dbd3ce4bc7696258a6c552122674 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.7E-22 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS06735 5625ed3bde4bd3e486add5614495d036 158 Gene3D G3DSA:3.10.450.50 14 157 2.0E-73 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS06735 5625ed3bde4bd3e486add5614495d036 158 SUPERFAMILY SSF54427 6 158 1.52E-77 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS06735 5625ed3bde4bd3e486add5614495d036 158 Pfam PF07080 Protein of unknown function (DUF1348) 7 148 5.8E-71 T 05-07-2017 IPR009783 Protein of unknown function DUF1348 AC028_RS14530 84909301b117b491d3de3639f7cc8bb1 414 SMART SM00729 56 287 0.0085 T 05-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AC028_RS14530 84909301b117b491d3de3639f7cc8bb1 414 Gene3D G3DSA:3.20.20.70 52 175 3.1E-10 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS14530 84909301b117b491d3de3639f7cc8bb1 414 Pfam PF04055 Radical SAM superfamily 62 239 2.3E-7 T 05-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AC028_RS14530 84909301b117b491d3de3639f7cc8bb1 414 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 3 406 1.1E-168 T 05-07-2017 IPR023874 DNA modification/repair radical SAM protein, putative AC028_RS14530 84909301b117b491d3de3639f7cc8bb1 414 SUPERFAMILY SSF102114 45 184 2.49E-15 T 05-07-2017 AC028_RS14530 84909301b117b491d3de3639f7cc8bb1 414 SUPERFAMILY SSF47781 310 382 9.45E-8 T 05-07-2017 IPR010994 RuvA domain 2-like AC028_RS19575 ee6808a9476930b38df23d421d9b771a 654 Gene3D G3DSA:2.30.40.10 35 148 6.5E-20 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS19575 ee6808a9476930b38df23d421d9b771a 654 SUPERFAMILY SSF51556 98 160 6.49E-47 T 05-07-2017 IPR032466 Metal-dependent hydrolase AC028_RS19575 ee6808a9476930b38df23d421d9b771a 654 SUPERFAMILY SSF51556 240 531 6.49E-47 T 05-07-2017 IPR032466 Metal-dependent hydrolase AC028_RS19575 ee6808a9476930b38df23d421d9b771a 654 SUPERFAMILY SSF51338 530 574 4.56E-25 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS19575 ee6808a9476930b38df23d421d9b771a 654 SUPERFAMILY SSF51338 34 99 4.56E-25 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS19575 ee6808a9476930b38df23d421d9b771a 654 Pfam PF07969 Amidohydrolase family 87 571 5.4E-124 T 05-07-2017 IPR013108 Amidohydrolase 3 AC028_RS19575 ee6808a9476930b38df23d421d9b771a 654 Gene3D G3DSA:3.20.20.140 241 523 5.2E-21 T 05-07-2017 AC028_RS11535 870c03a42fb62c77ec302d2f83b5963c 211 Gene3D G3DSA:2.40.240.10 6 97 2.7E-33 T 05-07-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AC028_RS11535 870c03a42fb62c77ec302d2f83b5963c 211 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 97 4.0E-47 T 05-07-2017 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AC028_RS11535 870c03a42fb62c77ec302d2f83b5963c 211 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 188 29.613 T 05-07-2017 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AC028_RS11535 870c03a42fb62c77ec302d2f83b5963c 211 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 173 3.1E-38 T 05-07-2017 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AC028_RS11535 870c03a42fb62c77ec302d2f83b5963c 211 Gene3D G3DSA:2.170.120.20 100 197 1.5E-25 T 05-07-2017 IPR020057 Ribosomal protein L25, beta domain AC028_RS11535 870c03a42fb62c77ec302d2f83b5963c 211 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 5 97 22.821 T 05-07-2017 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AC028_RS11535 870c03a42fb62c77ec302d2f83b5963c 211 Pfam PF01386 Ribosomal L25p family 7 94 2.2E-26 T 05-07-2017 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AC028_RS11535 870c03a42fb62c77ec302d2f83b5963c 211 SUPERFAMILY SSF50715 4 197 4.36E-55 T 05-07-2017 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AC028_RS11535 870c03a42fb62c77ec302d2f83b5963c 211 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 103 189 5.2E-24 T 05-07-2017 IPR020057 Ribosomal protein L25, beta domain AC028_RS17815 953da55507307bee7d6ed2984fdb14fb 200 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 197 1.8E-65 T 05-07-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AC028_RS17815 953da55507307bee7d6ed2984fdb14fb 200 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 197 32.166 T 05-07-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AC028_RS17815 953da55507307bee7d6ed2984fdb14fb 200 Gene3D G3DSA:3.40.50.880 1 197 9.3E-70 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS17815 953da55507307bee7d6ed2984fdb14fb 200 PIRSF PIRSF000495 2 199 3.1E-62 T 05-07-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AC028_RS17815 953da55507307bee7d6ed2984fdb14fb 200 Pfam PF00117 Glutamine amidotransferase class-I 6 195 4.5E-19 T 05-07-2017 IPR017926 Glutamine amidotransferase AC028_RS17815 953da55507307bee7d6ed2984fdb14fb 200 SUPERFAMILY SSF52317 4 197 3.3E-49 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS19870 8a0d1b61f3ad2557c7595800db1d9d18 214 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS19870 8a0d1b61f3ad2557c7595800db1d9d18 214 Gene3D G3DSA:3.40.50.300 7 210 1.5E-37 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19870 8a0d1b61f3ad2557c7595800db1d9d18 214 SMART SM00382 36 213 4.0E-7 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS19870 8a0d1b61f3ad2557c7595800db1d9d18 214 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 12 204 8.0E-70 T 05-07-2017 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 AC028_RS19870 8a0d1b61f3ad2557c7595800db1d9d18 214 SUPERFAMILY SSF52540 10 211 2.04E-39 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19870 8a0d1b61f3ad2557c7595800db1d9d18 214 Pfam PF00005 ABC transporter 30 165 2.4E-24 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS17165 dda0e5ee49476218b159057c5719db99 373 Gene3D G3DSA:3.40.50.2000 190 337 2.9E-14 T 05-07-2017 AC028_RS17165 dda0e5ee49476218b159057c5719db99 373 Pfam PF00534 Glycosyl transferases group 1 191 339 9.1E-24 T 05-07-2017 IPR001296 Glycosyl transferase, family 1 AC028_RS17165 dda0e5ee49476218b159057c5719db99 373 SUPERFAMILY SSF53756 22 363 1.07E-56 T 05-07-2017 AC028_RS17165 dda0e5ee49476218b159057c5719db99 373 Pfam PF13579 Glycosyl transferase 4-like domain 23 168 5.0E-10 T 05-07-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AC028_RS12840 a3682e141183a119090d1c246abac124 238 Gene3D G3DSA:1.10.10.10 135 222 5.4E-21 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS12840 a3682e141183a119090d1c246abac124 238 SMART SM00448 1 113 6.3E-40 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS12840 a3682e141183a119090d1c246abac124 238 Gene3D G3DSA:3.40.50.2300 1 134 9.7E-37 T 05-07-2017 AC028_RS12840 a3682e141183a119090d1c246abac124 238 Pfam PF00072 Response regulator receiver domain 4 113 1.5E-26 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS12840 a3682e141183a119090d1c246abac124 238 SUPERFAMILY SSF52172 1 172 1.1E-37 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS12840 a3682e141183a119090d1c246abac124 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 1.6E-15 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS12840 a3682e141183a119090d1c246abac124 238 SMART SM00862 147 221 1.2E-14 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS02655 2b95bdbf40e02274fe5774a9f4b66113 293 Pfam PF13369 Transglutaminase-like superfamily 60 209 7.2E-45 T 05-07-2017 IPR032698 Protein SirB1, N-terminal AC028_RS02655 2b95bdbf40e02274fe5774a9f4b66113 293 Gene3D G3DSA:1.25.40.10 204 277 1.5E-10 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS02655 2b95bdbf40e02274fe5774a9f4b66113 293 SUPERFAMILY SSF48452 204 277 3.59E-10 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS02655 2b95bdbf40e02274fe5774a9f4b66113 293 Pfam PF13371 Tetratricopeptide repeat 211 282 1.2E-18 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS03620 fa1df6de02b2aee1890e44eae97794b5 139 Gene3D G3DSA:3.30.70.20 19 90 5.4E-7 T 05-07-2017 AC028_RS03620 fa1df6de02b2aee1890e44eae97794b5 139 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 05-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AC028_RS03620 fa1df6de02b2aee1890e44eae97794b5 139 Gene3D G3DSA:3.30.70.20 91 137 1.2E-14 T 05-07-2017 AC028_RS03620 fa1df6de02b2aee1890e44eae97794b5 139 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 118 129 - T 05-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AC028_RS03620 fa1df6de02b2aee1890e44eae97794b5 139 Pfam PF14697 4Fe-4S dicluster domain 81 134 3.1E-15 T 05-07-2017 AC028_RS03620 fa1df6de02b2aee1890e44eae97794b5 139 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 4 138 9.4E-66 T 05-07-2017 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 AC028_RS03620 fa1df6de02b2aee1890e44eae97794b5 139 Pfam PF04060 Putative Fe-S cluster 16 48 1.4E-14 T 05-07-2017 IPR007202 4Fe-4S domain GO:0051536 AC028_RS03620 fa1df6de02b2aee1890e44eae97794b5 139 SUPERFAMILY SSF54862 9 137 1.13E-26 T 05-07-2017 AC028_RS04675 744ec689f6921a9fb379cac52f043695 455 SUPERFAMILY SSF158791 12 122 2.09E-17 T 05-07-2017 AC028_RS04675 744ec689f6921a9fb379cac52f043695 455 SMART SM00924 22 125 1.7E-22 T 05-07-2017 IPR006668 Magnesium transporter, MgtE intracellular domain AC028_RS04675 744ec689f6921a9fb379cac52f043695 455 Gene3D G3DSA:1.10.357.20 273 451 2.1E-59 T 05-07-2017 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AC028_RS04675 744ec689f6921a9fb379cac52f043695 455 Pfam PF03448 MgtE intracellular N domain 23 123 4.9E-19 T 05-07-2017 IPR006668 Magnesium transporter, MgtE intracellular domain AC028_RS04675 744ec689f6921a9fb379cac52f043695 455 Pfam PF01769 Divalent cation transporter 313 444 5.4E-31 T 05-07-2017 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AC028_RS04675 744ec689f6921a9fb379cac52f043695 455 SUPERFAMILY SSF54631 124 266 7.6E-27 T 05-07-2017 AC028_RS04675 744ec689f6921a9fb379cac52f043695 455 TIGRFAM TIGR00400 mgtE: magnesium transporter 13 450 1.5E-101 T 05-07-2017 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AC028_RS04675 744ec689f6921a9fb379cac52f043695 455 SMART SM00116 198 246 9.1E-11 T 05-07-2017 IPR000644 CBS domain AC028_RS04675 744ec689f6921a9fb379cac52f043695 455 Gene3D G3DSA:3.10.580.10 118 252 8.5E-18 T 05-07-2017 AC028_RS04675 744ec689f6921a9fb379cac52f043695 455 SUPERFAMILY SSF161093 273 450 6.15E-48 T 05-07-2017 AC028_RS04675 744ec689f6921a9fb379cac52f043695 455 Pfam PF00571 CBS domain 195 245 1.6E-9 T 05-07-2017 IPR000644 CBS domain AC028_RS04675 744ec689f6921a9fb379cac52f043695 455 Gene3D G3DSA:1.25.60.10 12 117 1.1E-16 T 05-07-2017 AC028_RS11500 b5344ce75aed24a737a46d3b64c8e606 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 05-07-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AC028_RS11500 b5344ce75aed24a737a46d3b64c8e606 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 358 39.469 T 05-07-2017 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AC028_RS11500 b5344ce75aed24a737a46d3b64c8e606 361 Pfam PF03462 PCRF domain 13 203 9.3E-70 T 05-07-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AC028_RS11500 b5344ce75aed24a737a46d3b64c8e606 361 Pfam PF00472 RF-1 domain 213 321 9.3E-43 T 05-07-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AC028_RS11500 b5344ce75aed24a737a46d3b64c8e606 361 Gene3D G3DSA:3.30.160.20 213 287 6.1E-35 T 05-07-2017 IPR014720 Double-stranded RNA-binding domain AC028_RS11500 b5344ce75aed24a737a46d3b64c8e606 361 Gene3D G3DSA:1.20.58.410 8 93 1.2E-14 T 05-07-2017 AC028_RS11500 b5344ce75aed24a737a46d3b64c8e606 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 358 5.1E-153 T 05-07-2017 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AC028_RS11500 b5344ce75aed24a737a46d3b64c8e606 361 SMART SM00937 63 178 2.5E-63 T 05-07-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AC028_RS11500 b5344ce75aed24a737a46d3b64c8e606 361 SUPERFAMILY SSF75620 12 354 2.62E-129 T 05-07-2017 AC028_RS02520 47f13eac6b5f97571c90e9a79f564770 513 Pfam PF08666 SAF domain 19 85 1.7E-7 T 05-07-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 AC028_RS02520 47f13eac6b5f97571c90e9a79f564770 513 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 11 513 3.2E-281 T 05-07-2017 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 AC028_RS02520 47f13eac6b5f97571c90e9a79f564770 513 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 116 510 5.1E-139 T 05-07-2017 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 AC028_RS02520 47f13eac6b5f97571c90e9a79f564770 513 SMART SM00858 19 89 3.6E-8 T 05-07-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 AC028_RS05300 55c7ce409067c0713af27735fb15dde6 142 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 135 3.6E-39 T 05-07-2017 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-75105 AC028_RS05300 55c7ce409067c0713af27735fb15dde6 142 Gene3D G3DSA:3.10.129.10 3 140 1.1E-48 T 05-07-2017 IPR029069 HotDog domain AC028_RS05300 55c7ce409067c0713af27735fb15dde6 142 Pfam PF03061 Thioesterase superfamily 50 127 9.4E-15 T 05-07-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 AC028_RS05300 55c7ce409067c0713af27735fb15dde6 142 SUPERFAMILY SSF54637 11 139 1.56E-31 T 05-07-2017 IPR029069 HotDog domain AC028_RS11040 d8b865cb1a34a18572ad2562331eb667 430 Gene3D G3DSA:2.40.110.10 145 220 2.2E-17 T 05-07-2017 AC028_RS11040 d8b865cb1a34a18572ad2562331eb667 430 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 250 384 3.3E-11 T 05-07-2017 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AC028_RS11040 d8b865cb1a34a18572ad2562331eb667 430 Gene3D G3DSA:1.20.140.10 221 406 2.2E-39 T 05-07-2017 AC028_RS11040 d8b865cb1a34a18572ad2562331eb667 430 SUPERFAMILY SSF56645 29 228 1.57E-38 T 05-07-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AC028_RS11040 d8b865cb1a34a18572ad2562331eb667 430 Gene3D G3DSA:1.10.540.10 13 123 2.6E-18 T 05-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AC028_RS11040 d8b865cb1a34a18572ad2562331eb667 430 SUPERFAMILY SSF47203 245 386 2.47E-11 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS11040 d8b865cb1a34a18572ad2562331eb667 430 PIRSF PIRSF016578 8 394 9.0E-22 T 05-07-2017 AC028_RS02660 2af50916e9fb397e3e385e1c77db7a7f 51 SUPERFAMILY SSF57802 1 49 3.87E-20 T 05-07-2017 AC028_RS02660 2af50916e9fb397e3e385e1c77db7a7f 51 PIRSF PIRSF000071 1 51 6.9E-23 T 05-07-2017 IPR024922 Rubredoxin GO:0005506|GO:0009055 AC028_RS02660 2af50916e9fb397e3e385e1c77db7a7f 51 Gene3D G3DSA:2.20.28.10 1 50 6.2E-23 T 05-07-2017 IPR004039 Rubredoxin-type fold AC028_RS02660 2af50916e9fb397e3e385e1c77db7a7f 51 Pfam PF00301 Rubredoxin 1 45 8.7E-21 T 05-07-2017 IPR024935 Rubredoxin domain GO:0005506 AC028_RS02660 2af50916e9fb397e3e385e1c77db7a7f 51 ProSitePatterns PS00202 Rubredoxin signature. 29 39 - T 05-07-2017 IPR018527 Rubredoxin, iron-binding site GO:0046872 AC028_RS19220 08a247e39f17c62fd7c4170281440ab6 619 Gene3D G3DSA:4.10.860.10 186 246 3.0E-17 T 05-07-2017 IPR001943 UVR domain GO:0005515 AC028_RS19220 08a247e39f17c62fd7c4170281440ab6 619 SUPERFAMILY SSF82771 21 104 2.09E-17 T 05-07-2017 IPR000305 GIY-YIG nuclease superfamily AC028_RS19220 08a247e39f17c62fd7c4170281440ab6 619 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 16 584 2.2E-177 T 05-07-2017 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AC028_RS19220 08a247e39f17c62fd7c4170281440ab6 619 Pfam PF01541 GIY-YIG catalytic domain 23 97 7.2E-7 T 05-07-2017 IPR000305 GIY-YIG nuclease superfamily AC028_RS19220 08a247e39f17c62fd7c4170281440ab6 619 SMART SM00465 21 102 1.8E-15 T 05-07-2017 IPR000305 GIY-YIG nuclease superfamily AC028_RS19220 08a247e39f17c62fd7c4170281440ab6 619 SUPERFAMILY SSF46600 193 246 4.58E-12 T 05-07-2017 IPR001943 UVR domain GO:0005515 AC028_RS19220 08a247e39f17c62fd7c4170281440ab6 619 SUPERFAMILY SSF47781 519 605 5.4E-19 T 05-07-2017 IPR010994 RuvA domain 2-like AC028_RS19220 08a247e39f17c62fd7c4170281440ab6 619 SMART SM00278 552 571 1.2 T 05-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AC028_RS19220 08a247e39f17c62fd7c4170281440ab6 619 SMART SM00278 584 603 230.0 T 05-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AC028_RS19220 08a247e39f17c62fd7c4170281440ab6 619 Gene3D G3DSA:1.10.150.20 551 605 7.1E-19 T 05-07-2017 AC028_RS19220 08a247e39f17c62fd7c4170281440ab6 619 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 384 538 1.1E-47 T 05-07-2017 IPR001162 UvrC family homology region AC028_RS19220 08a247e39f17c62fd7c4170281440ab6 619 Gene3D G3DSA:3.40.1440.10 22 98 7.4E-6 T 05-07-2017 IPR027299 GIY-YIG domain AC028_RS19220 08a247e39f17c62fd7c4170281440ab6 619 Hamap MF_00203 UvrABC system protein C [uvrC]. 8 603 26.92 T 05-07-2017 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AC028_RS19220 08a247e39f17c62fd7c4170281440ab6 619 Pfam PF02151 UvrB/uvrC motif 217 240 9.6E-8 T 05-07-2017 IPR001943 UVR domain GO:0005515 AC028_RS15290 34604314168c39742c7c7c64d093b604 399 SUPERFAMILY SSF56349 99 378 1.21E-52 T 05-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AC028_RS15290 34604314168c39742c7c7c64d093b604 399 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 99 150 7.5E-9 T 05-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AC028_RS15290 34604314168c39742c7c7c64d093b604 399 Pfam PF13356 Domain of unknown function (DUF4102) 6 93 2.8E-17 T 05-07-2017 IPR025166 Domain of unknown function DUF4102 AC028_RS15290 34604314168c39742c7c7c64d093b604 399 Gene3D G3DSA:1.10.443.10 205 378 7.3E-27 T 05-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AC028_RS15290 34604314168c39742c7c7c64d093b604 399 Pfam PF00589 Phage integrase family 207 371 8.3E-17 T 05-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AC028_RS15290 34604314168c39742c7c7c64d093b604 399 Gene3D G3DSA:1.10.150.130 98 193 4.9E-12 T 05-07-2017 IPR023109 Integrase/recombinase, N-terminal AC028_RS21805 a2e490f07eb2cec3c3a62a84bb127824 220 SUPERFAMILY SSF53474 3 220 2.7E-35 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS21805 a2e490f07eb2cec3c3a62a84bb127824 220 Pfam PF01738 Dienelactone hydrolase family 15 218 6.8E-36 T 05-07-2017 IPR002925 Dienelactone hydrolase GO:0016787 AC028_RS21805 a2e490f07eb2cec3c3a62a84bb127824 220 Gene3D G3DSA:3.40.50.1820 3 220 2.6E-41 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS14930 8396c6bf69a4214c1ebfbdf619ed4e9b 593 ProSitePatterns PS00080 Multicopper oxidases signature 2. 574 585 - T 05-07-2017 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AC028_RS14930 8396c6bf69a4214c1ebfbdf619ed4e9b 593 Pfam PF07731 Multicopper oxidase 481 592 2.2E-26 T 05-07-2017 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AC028_RS14930 8396c6bf69a4214c1ebfbdf619ed4e9b 593 Gene3D G3DSA:2.60.40.420 65 170 4.3E-32 T 05-07-2017 IPR008972 Cupredoxin AC028_RS14930 8396c6bf69a4214c1ebfbdf619ed4e9b 593 Gene3D G3DSA:2.60.40.420 472 592 1.5E-38 T 05-07-2017 IPR008972 Cupredoxin AC028_RS14930 8396c6bf69a4214c1ebfbdf619ed4e9b 593 SUPERFAMILY SSF49503 442 591 4.22E-36 T 05-07-2017 IPR008972 Cupredoxin AC028_RS14930 8396c6bf69a4214c1ebfbdf619ed4e9b 593 ProSitePatterns PS00079 Multicopper oxidases signature 1. 569 589 - T 05-07-2017 IPR033138 Multicopper oxidases, conserved site AC028_RS14930 8396c6bf69a4214c1ebfbdf619ed4e9b 593 SUPERFAMILY SSF49503 176 394 1.11E-54 T 05-07-2017 IPR008972 Cupredoxin AC028_RS14930 8396c6bf69a4214c1ebfbdf619ed4e9b 593 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 14 592 2.8E-299 T 05-07-2017 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 AC028_RS14930 8396c6bf69a4214c1ebfbdf619ed4e9b 593 Gene3D G3DSA:2.60.40.420 177 382 1.7E-48 T 05-07-2017 IPR008972 Cupredoxin AC028_RS14930 8396c6bf69a4214c1ebfbdf619ed4e9b 593 SUPERFAMILY SSF49503 63 203 9.75E-40 T 05-07-2017 IPR008972 Cupredoxin AC028_RS14930 8396c6bf69a4214c1ebfbdf619ed4e9b 593 Pfam PF00394 Multicopper oxidase 182 358 5.1E-31 T 05-07-2017 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 AC028_RS14930 8396c6bf69a4214c1ebfbdf619ed4e9b 593 ProSitePatterns PS00079 Multicopper oxidases signature 1. 147 167 - T 05-07-2017 IPR033138 Multicopper oxidases, conserved site AC028_RS14930 8396c6bf69a4214c1ebfbdf619ed4e9b 593 Pfam PF07732 Multicopper oxidase 64 171 1.4E-39 T 05-07-2017 IPR011707 Multicopper oxidase, type 3 GO:0005507 AC028_RS16700 4b1de70d3fb398993d5d04b159b4b43b 205 Pfam PF11655 Protein of unknown function (DUF2589) 15 191 2.9E-48 T 05-07-2017 IPR024510 Protein of unknown function DUF2589 AC028_RS16700 4b1de70d3fb398993d5d04b159b4b43b 205 ProDom PD104924 XAC1607 AF0417 7 201 2.0E-101 T 05-07-2017 AC028_RS00535 9ddf23c1a4ccc97cba15f4c3a189bd6d 576 SUPERFAMILY SSF52009 116 235 3.53E-28 T 05-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AC028_RS00535 9ddf23c1a4ccc97cba15f4c3a189bd6d 576 Gene3D G3DSA:3.20.20.60 257 568 6.7E-98 T 05-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AC028_RS00535 9ddf23c1a4ccc97cba15f4c3a189bd6d 576 Gene3D G3DSA:3.50.30.10 135 256 2.4E-35 T 05-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AC028_RS00535 9ddf23c1a4ccc97cba15f4c3a189bd6d 576 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 129 1.3E-23 T 05-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AC028_RS00535 9ddf23c1a4ccc97cba15f4c3a189bd6d 576 Gene3D G3DSA:1.10.274.10 25 134 3.4E-26 T 05-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AC028_RS00535 9ddf23c1a4ccc97cba15f4c3a189bd6d 576 PIRSF PIRSF000732 1 574 1.7E-197 T 05-07-2017 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 AC028_RS00535 9ddf23c1a4ccc97cba15f4c3a189bd6d 576 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 449 464 1.6E-26 T 05-07-2017 AC028_RS00535 9ddf23c1a4ccc97cba15f4c3a189bd6d 576 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 466 481 1.6E-26 T 05-07-2017 AC028_RS00535 9ddf23c1a4ccc97cba15f4c3a189bd6d 576 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 294 313 1.6E-26 T 05-07-2017 AC028_RS00535 9ddf23c1a4ccc97cba15f4c3a189bd6d 576 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 502 514 1.6E-26 T 05-07-2017 AC028_RS00535 9ddf23c1a4ccc97cba15f4c3a189bd6d 576 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 6 566 2.4E-150 T 05-07-2017 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AC028_RS00535 9ddf23c1a4ccc97cba15f4c3a189bd6d 576 Pfam PF00391 PEP-utilising enzyme, mobile domain 155 226 1.3E-19 T 05-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AC028_RS00535 9ddf23c1a4ccc97cba15f4c3a189bd6d 576 SUPERFAMILY SSF47831 27 145 1.31E-25 T 05-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AC028_RS00535 9ddf23c1a4ccc97cba15f4c3a189bd6d 576 SUPERFAMILY SSF51621 250 548 2.88E-95 T 05-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AC028_RS00535 9ddf23c1a4ccc97cba15f4c3a189bd6d 576 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 542 1.7E-95 T 05-07-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AC028_RS00535 9ddf23c1a4ccc97cba15f4c3a189bd6d 576 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 449 467 - T 05-07-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AC028_RS20290 bbe74fc5ad1404cf10b9bce5cef1d958 254 PIRSF PIRSF004808 2 250 5.2E-70 T 05-07-2017 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AC028_RS20290 bbe74fc5ad1404cf10b9bce5cef1d958 254 Gene3D G3DSA:3.40.1280.10 5 162 2.7E-34 T 05-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AC028_RS20290 bbe74fc5ad1404cf10b9bce5cef1d958 254 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 5 243 6.3E-66 T 05-07-2017 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AC028_RS20290 bbe74fc5ad1404cf10b9bce5cef1d958 254 Pfam PF00588 SpoU rRNA Methylase family 7 157 2.2E-35 T 05-07-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AC028_RS20290 bbe74fc5ad1404cf10b9bce5cef1d958 254 SUPERFAMILY SSF75217 6 167 3.86E-36 T 05-07-2017 IPR029028 Alpha/beta knot methyltransferases AC028_RS00875 e8101df052a050b5c30d58b2eeb3a2b9 347 Gene3D G3DSA:3.40.50.720 7 168 4.4E-38 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS00875 e8101df052a050b5c30d58b2eeb3a2b9 347 Gene3D G3DSA:3.30.360.10 169 324 1.2E-45 T 05-07-2017 AC028_RS00875 e8101df052a050b5c30d58b2eeb3a2b9 347 SUPERFAMILY SSF51735 6 169 1.36E-23 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS00875 e8101df052a050b5c30d58b2eeb3a2b9 347 Pfam PF00742 Homoserine dehydrogenase 147 342 1.0E-43 T 05-07-2017 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AC028_RS00875 e8101df052a050b5c30d58b2eeb3a2b9 347 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 193 215 - T 05-07-2017 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AC028_RS00875 e8101df052a050b5c30d58b2eeb3a2b9 347 PIRSF PIRSF036497 2 347 1.8E-93 T 05-07-2017 IPR022697 Homoserine dehydrogenase lacking ACT domain GO:0004412 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AC028_RS00875 e8101df052a050b5c30d58b2eeb3a2b9 347 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 11 135 5.5E-10 T 05-07-2017 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AC028_RS00875 e8101df052a050b5c30d58b2eeb3a2b9 347 SUPERFAMILY SSF55347 147 329 9.81E-41 T 05-07-2017 AC028_RS04145 1c5672f590feb4fa44f7c0f5c8f1e60a 221 Gene3D G3DSA:1.10.10.10 126 216 5.4E-25 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS04145 1c5672f590feb4fa44f7c0f5c8f1e60a 221 SMART SM00862 145 216 1.3E-22 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS04145 1c5672f590feb4fa44f7c0f5c8f1e60a 221 SUPERFAMILY SSF52172 1 118 8.97E-34 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS04145 1c5672f590feb4fa44f7c0f5c8f1e60a 221 SMART SM00448 1 112 7.7E-33 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS04145 1c5672f590feb4fa44f7c0f5c8f1e60a 221 SUPERFAMILY SSF46894 125 215 1.98E-24 T 05-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AC028_RS04145 1c5672f590feb4fa44f7c0f5c8f1e60a 221 Gene3D G3DSA:3.40.50.2300 1 121 1.4E-32 T 05-07-2017 AC028_RS04145 1c5672f590feb4fa44f7c0f5c8f1e60a 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 215 2.1E-19 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS04145 1c5672f590feb4fa44f7c0f5c8f1e60a 221 Pfam PF00072 Response regulator receiver domain 4 112 6.5E-21 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS12570 a3af1c9864ac9ddbaecf927d78117d2a 289 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 9 288 19.957 T 05-07-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AC028_RS12570 a3af1c9864ac9ddbaecf927d78117d2a 289 Pfam PF01256 Carbohydrate kinase 32 275 2.7E-40 T 05-07-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AC028_RS12570 a3af1c9864ac9ddbaecf927d78117d2a 289 SUPERFAMILY SSF53613 8 285 8.89E-58 T 05-07-2017 IPR029056 Ribokinase-like AC028_RS12570 a3af1c9864ac9ddbaecf927d78117d2a 289 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 13 282 4.9E-51 T 05-07-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AC028_RS12570 a3af1c9864ac9ddbaecf927d78117d2a 289 Gene3D G3DSA:3.40.1190.20 12 286 1.3E-67 T 05-07-2017 IPR029056 Ribokinase-like AC028_RS05890 4dbcea38d4014d1ab2498e81ab6491c3 163 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 10 162 3.2E-56 T 05-07-2017 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394 AC028_RS05890 4dbcea38d4014d1ab2498e81ab6491c3 163 Pfam PF09349 OHCU decarboxylase 9 160 8.7E-40 T 05-07-2017 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394 AC028_RS05890 4dbcea38d4014d1ab2498e81ab6491c3 163 SUPERFAMILY SSF158694 9 162 5.36E-49 T 05-07-2017 AC028_RS05890 4dbcea38d4014d1ab2498e81ab6491c3 163 Gene3D G3DSA:1.10.3330.10 9 162 2.2E-54 T 05-07-2017 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394 AC028_RS14825 4ddf82b9ff2bb34f2cbe2a33da721057 468 SUPERFAMILY SSF50615 1 71 1.07E-23 T 05-07-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AC028_RS14825 4ddf82b9ff2bb34f2cbe2a33da721057 468 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 70 1.9E-17 T 05-07-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AC028_RS14825 4ddf82b9ff2bb34f2cbe2a33da721057 468 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 56.255 T 05-07-2017 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 AC028_RS14825 4ddf82b9ff2bb34f2cbe2a33da721057 468 Gene3D G3DSA:3.40.50.300 74 347 1.9E-107 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS14825 4ddf82b9ff2bb34f2cbe2a33da721057 468 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 05-07-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AC028_RS14825 4ddf82b9ff2bb34f2cbe2a33da721057 468 Gene3D G3DSA:2.40.10.170 1 71 2.5E-27 T 05-07-2017 AC028_RS14825 4ddf82b9ff2bb34f2cbe2a33da721057 468 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 1.7E-252 T 05-07-2017 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 AC028_RS14825 4ddf82b9ff2bb34f2cbe2a33da721057 468 SUPERFAMILY SSF47917 349 464 2.51E-54 T 05-07-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AC028_RS14825 4ddf82b9ff2bb34f2cbe2a33da721057 468 SMART SM00382 140 331 0.0014 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS14825 4ddf82b9ff2bb34f2cbe2a33da721057 468 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 346 1.6E-61 T 05-07-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AC028_RS14825 4ddf82b9ff2bb34f2cbe2a33da721057 468 Gene3D G3DSA:1.10.1140.10 350 465 8.1E-56 T 05-07-2017 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AC028_RS14825 4ddf82b9ff2bb34f2cbe2a33da721057 468 SUPERFAMILY SSF52540 75 352 2.2E-89 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02810 edb0b1536967d3cd9c7994907e78fcca 371 SUPERFAMILY SSF109604 129 340 5.34E-39 T 05-07-2017 AC028_RS02810 edb0b1536967d3cd9c7994907e78fcca 371 Pfam PF08668 HDOD domain 140 268 2.4E-24 T 05-07-2017 IPR013976 Metal-dependent hydrolase HDOD AC028_RS02810 edb0b1536967d3cd9c7994907e78fcca 371 PIRSF PIRSF036883 1 369 7.9E-168 T 05-07-2017 IPR014626 Signal transduction response regulator with modified HD-GYP domain, putative AC028_RS02810 edb0b1536967d3cd9c7994907e78fcca 371 Gene3D G3DSA:3.40.50.2300 2 123 1.0E-8 T 05-07-2017 AC028_RS02810 edb0b1536967d3cd9c7994907e78fcca 371 SUPERFAMILY SSF52172 1 131 3.42E-11 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS02810 edb0b1536967d3cd9c7994907e78fcca 371 Gene3D G3DSA:1.10.3150.10 124 339 9.5E-48 T 05-07-2017 IPR013976 Metal-dependent hydrolase HDOD AC028_RS20080 c343de89ac5b723635b9abde727c6ec4 637 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 384 632 4.5E-36 T 05-07-2017 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 AC028_RS20080 c343de89ac5b723635b9abde727c6ec4 637 Gene3D G3DSA:2.60.120.260 398 637 7.2E-87 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS20080 c343de89ac5b723635b9abde727c6ec4 637 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 56 342 2.0E-75 T 05-07-2017 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 AC028_RS20080 c343de89ac5b723635b9abde727c6ec4 637 SUPERFAMILY SSF49785 398 637 9.57E-73 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS20080 c343de89ac5b723635b9abde727c6ec4 637 SUPERFAMILY SSF53474 43 404 3.33E-49 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS20080 c343de89ac5b723635b9abde727c6ec4 637 Gene3D G3DSA:1.10.3020.10 209 280 2.3E-25 T 05-07-2017 AC028_RS20080 c343de89ac5b723635b9abde727c6ec4 637 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 53 636 6.7E-74 T 05-07-2017 IPR005674 CocE/Serine esterase GO:0016787 AC028_RS20080 c343de89ac5b723635b9abde727c6ec4 637 SMART SM00939 369 633 1.2E-82 T 05-07-2017 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 AC028_RS20080 c343de89ac5b723635b9abde727c6ec4 637 Gene3D G3DSA:3.40.50.1820 281 397 7.3E-85 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS20080 c343de89ac5b723635b9abde727c6ec4 637 Gene3D G3DSA:3.40.50.1820 6 208 7.3E-85 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS21720 483760907f7f63dc31e57e6065e6c711 135 Gene3D G3DSA:3.10.180.10 20 129 1.4E-22 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS21720 483760907f7f63dc31e57e6065e6c711 135 SUPERFAMILY SSF54593 18 129 2.34E-21 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS21720 483760907f7f63dc31e57e6065e6c711 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 19 123 6.3E-7 T 05-07-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AC028_RS19780 c2b657ad6e6b6c4916995e0c09dd2abb 406 Pfam PF01963 TraB family 21 242 9.0E-25 T 05-07-2017 IPR002816 Pheromone shutdown, TraB AC028_RS19780 c2b657ad6e6b6c4916995e0c09dd2abb 406 TIGRFAM TIGR00261 traB: TraB family protein 28 403 2.5E-78 T 05-07-2017 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal AC028_RS08165 4478bea08be5ce897506198f112ece4c 769 SMART SM00387 222 338 5.6E-43 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS08165 4478bea08be5ce897506198f112ece4c 769 SUPERFAMILY SSF55874 164 336 6.29E-50 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS08165 4478bea08be5ce897506198f112ece4c 769 Pfam PF00512 His Kinase A (phospho-acceptor) domain 110 174 8.7E-17 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS08165 4478bea08be5ce897506198f112ece4c 769 SUPERFAMILY SSF47226 647 753 5.89E-24 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS08165 4478bea08be5ce897506198f112ece4c 769 Pfam PF00072 Response regulator receiver domain 499 611 9.3E-25 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS08165 4478bea08be5ce897506198f112ece4c 769 Gene3D G3DSA:3.30.565.10 181 336 4.9E-51 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS08165 4478bea08be5ce897506198f112ece4c 769 SMART SM00388 110 175 1.2E-20 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS08165 4478bea08be5ce897506198f112ece4c 769 SMART SM00073 659 753 1.3E-4 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS08165 4478bea08be5ce897506198f112ece4c 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 316 8.7E-18 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS08165 4478bea08be5ce897506198f112ece4c 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 335 8.7E-18 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS08165 4478bea08be5ce897506198f112ece4c 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 263 277 8.7E-18 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS08165 4478bea08be5ce897506198f112ece4c 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 291 8.7E-18 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS08165 4478bea08be5ce897506198f112ece4c 769 Gene3D G3DSA:3.40.50.2300 493 620 4.0E-45 T 05-07-2017 AC028_RS08165 4478bea08be5ce897506198f112ece4c 769 Gene3D G3DSA:1.20.120.160 645 753 2.0E-26 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS08165 4478bea08be5ce897506198f112ece4c 769 Gene3D G3DSA:1.10.287.130 104 171 3.9E-14 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS08165 4478bea08be5ce897506198f112ece4c 769 SUPERFAMILY SSF52172 496 619 2.85E-39 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS08165 4478bea08be5ce897506198f112ece4c 769 Pfam PF01627 Hpt domain 670 740 4.5E-12 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS08165 4478bea08be5ce897506198f112ece4c 769 SMART SM00448 497 613 5.8E-38 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS08165 4478bea08be5ce897506198f112ece4c 769 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 222 336 8.5E-31 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS08165 4478bea08be5ce897506198f112ece4c 769 SUPERFAMILY SSF47384 93 176 1.94E-19 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS19080 bbf1c1f4569b69d4f6ed9d05b02a705c 219 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 42 51 - T 05-07-2017 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AC028_RS19080 bbf1c1f4569b69d4f6ed9d05b02a705c 219 SUPERFAMILY SSF51569 7 213 1.61E-61 T 05-07-2017 AC028_RS19080 bbf1c1f4569b69d4f6ed9d05b02a705c 219 Pfam PF01081 KDPG and KHG aldolase 11 203 1.8E-63 T 05-07-2017 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AC028_RS19080 bbf1c1f4569b69d4f6ed9d05b02a705c 219 Gene3D G3DSA:3.20.20.70 5 217 1.4E-69 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS19080 bbf1c1f4569b69d4f6ed9d05b02a705c 219 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 11 211 8.9E-78 T 05-07-2017 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AC028_RS00395 2d773fffadc1a08d5ab77a88da6521ed 497 Pfam PF07687 Peptidase dimerisation domain 207 367 1.4E-13 T 05-07-2017 IPR011650 Peptidase M20, dimerisation domain AC028_RS00395 2d773fffadc1a08d5ab77a88da6521ed 497 SUPERFAMILY SSF53187 383 468 2.23E-47 T 05-07-2017 AC028_RS00395 2d773fffadc1a08d5ab77a88da6521ed 497 SUPERFAMILY SSF53187 12 209 2.23E-47 T 05-07-2017 AC028_RS00395 2d773fffadc1a08d5ab77a88da6521ed 497 Pfam PF01546 Peptidase family M20/M25/M40 95 466 6.7E-20 T 05-07-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AC028_RS00395 2d773fffadc1a08d5ab77a88da6521ed 497 Gene3D G3DSA:3.30.70.360 220 375 4.5E-31 T 05-07-2017 IPR011650 Peptidase M20, dimerisation domain AC028_RS00395 2d773fffadc1a08d5ab77a88da6521ed 497 Gene3D G3DSA:3.40.630.10 407 468 3.9E-46 T 05-07-2017 AC028_RS00395 2d773fffadc1a08d5ab77a88da6521ed 497 Gene3D G3DSA:3.40.630.10 14 219 3.9E-46 T 05-07-2017 AC028_RS17995 f32ac90804a8ac732c06b021f4af6539 404 Pfam PF01757 Acyltransferase family 5 368 7.7E-26 T 05-07-2017 IPR002656 Acyltransferase 3 GO:0016747 AC028_RS18965 7f6c5a76ee5662bfb1f10c17ea68ff09 162 PRINTS PR01402 Mutator MutX protein signature 27 42 2.9E-10 T 05-07-2017 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 AC028_RS18965 7f6c5a76ee5662bfb1f10c17ea68ff09 162 PRINTS PR01402 Mutator MutX protein signature 105 125 2.9E-10 T 05-07-2017 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 AC028_RS18965 7f6c5a76ee5662bfb1f10c17ea68ff09 162 PRINTS PR01402 Mutator MutX protein signature 125 142 2.9E-10 T 05-07-2017 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 AC028_RS18965 7f6c5a76ee5662bfb1f10c17ea68ff09 162 PRINTS PR01402 Mutator MutX protein signature 9 27 2.9E-10 T 05-07-2017 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 AC028_RS18965 7f6c5a76ee5662bfb1f10c17ea68ff09 162 PRINTS PR01402 Mutator MutX protein signature 74 100 2.9E-10 T 05-07-2017 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 AC028_RS18965 7f6c5a76ee5662bfb1f10c17ea68ff09 162 Gene3D G3DSA:3.90.79.10 6 153 1.9E-31 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS18965 7f6c5a76ee5662bfb1f10c17ea68ff09 162 SUPERFAMILY SSF55811 3 151 1.62E-25 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS18965 7f6c5a76ee5662bfb1f10c17ea68ff09 162 Pfam PF00293 NUDIX domain 12 134 7.5E-16 T 05-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AC028_RS18965 7f6c5a76ee5662bfb1f10c17ea68ff09 162 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 05-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AC028_RS17955 53db1c30ee067752df49eef0b6c6297c 239 SUPERFAMILY SSF50800 12 236 3.77E-75 T 05-07-2017 IPR011037 Pyruvate kinase-like, insert domain AC028_RS17955 53db1c30ee067752df49eef0b6c6297c 239 Pfam PF03473 MOSC domain 59 173 2.4E-27 T 05-07-2017 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AC028_RS17955 53db1c30ee067752df49eef0b6c6297c 239 Gene3D G3DSA:2.40.33.20 14 236 3.6E-91 T 05-07-2017 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like AC028_RS17955 53db1c30ee067752df49eef0b6c6297c 239 Pfam PF03475 3-alpha domain 183 223 8.3E-10 T 05-07-2017 IPR005163 3-alpha domain AC028_RS18505 dc031c518e5d2943b8fe9b8203dcf8bc 118 SUPERFAMILY SSF50022 4 110 5.5E-31 T 05-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AC028_RS18505 dc031c518e5d2943b8fe9b8203dcf8bc 118 Gene3D G3DSA:2.102.10.10 26 111 6.9E-20 T 05-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AC028_RS18505 dc031c518e5d2943b8fe9b8203dcf8bc 118 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 82 102 1.1E-7 T 05-07-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AC028_RS18505 dc031c518e5d2943b8fe9b8203dcf8bc 118 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 12 37 1.1E-7 T 05-07-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AC028_RS18505 dc031c518e5d2943b8fe9b8203dcf8bc 118 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 42 57 1.1E-7 T 05-07-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AC028_RS18505 dc031c518e5d2943b8fe9b8203dcf8bc 118 Pfam PF00355 Rieske [2Fe-2S] domain 37 109 1.2E-14 T 05-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AC028_RS09190 d789b9a6a44d8a0738ceb56b0269a389 564 Gene3D G3DSA:2.115.10.20 51 352 7.3E-90 T 05-07-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AC028_RS09190 d789b9a6a44d8a0738ceb56b0269a389 564 SUPERFAMILY SSF49899 375 557 5.54E-45 T 05-07-2017 IPR013320 Concanavalin A-like lectin/glucanase domain AC028_RS09190 d789b9a6a44d8a0738ceb56b0269a389 564 Gene3D G3DSA:2.60.120.200 376 557 1.7E-44 T 05-07-2017 IPR013320 Concanavalin A-like lectin/glucanase domain AC028_RS09190 d789b9a6a44d8a0738ceb56b0269a389 564 Pfam PF04616 Glycosyl hydrolases family 43 52 344 1.4E-96 T 05-07-2017 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AC028_RS09190 d789b9a6a44d8a0738ceb56b0269a389 564 SUPERFAMILY SSF75005 52 352 3.57E-86 T 05-07-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AC028_RS01590 0d6166d9385b643caa38929fa44a10fe 600 Pfam PF04183 IucA / IucC family 160 375 4.0E-34 T 05-07-2017 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 AC028_RS01590 0d6166d9385b643caa38929fa44a10fe 600 Pfam PF06276 Ferric iron reductase FhuF-like transporter 398 553 3.5E-19 T 05-07-2017 IPR022770 Ferric iron reductase FhuF domain AC028_RS16615 a9d39c0331a69bf38a8eab241041c279 175 Gene3D G3DSA:3.40.50.1820 3 173 1.9E-37 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS16615 a9d39c0331a69bf38a8eab241041c279 175 SUPERFAMILY SSF53474 4 172 5.86E-21 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS16615 a9d39c0331a69bf38a8eab241041c279 175 Pfam PF05728 Uncharacterised protein family (UPF0227) 10 95 3.3E-4 T 05-07-2017 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 ProSitePatterns PS00622 LuxR-type HTH domain signature. 866 893 - T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 Gene3D G3DSA:1.25.40.10 764 792 1.7E-14 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 Gene3D G3DSA:1.25.40.10 513 629 1.7E-14 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 Gene3D G3DSA:1.25.40.10 435 436 1.7E-14 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 Gene3D G3DSA:1.25.40.10 95 142 1.7E-14 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 SMART SM00028 596 629 9.7 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 SMART SM00028 764 797 91.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 SMART SM00028 554 587 5.6 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 SMART SM00382 53 205 9.8E-6 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 Gene3D G3DSA:3.40.50.300 143 190 1.3E-5 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 Gene3D G3DSA:3.40.50.300 43 94 1.3E-5 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 Pfam PF00196 Bacterial regulatory proteins, luxR family 851 902 7.2E-19 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 852 866 7.3E-12 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 882 894 7.3E-12 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 866 882 7.3E-12 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 Pfam PF13481 AAA domain 54 158 1.8E-6 T 05-07-2017 AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 Pfam PF13424 Tetratricopeptide repeat 556 628 3.2E-9 T 05-07-2017 AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 Gene3D G3DSA:1.10.10.10 848 912 7.3E-23 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 SUPERFAMILY SSF52540 44 244 5.4E-11 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 SUPERFAMILY SSF48452 516 628 3.8E-8 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 SMART SM00421 849 906 2.9E-22 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS02690 50b4e5a1dca75409a3374f35a4a73011 926 SUPERFAMILY SSF46894 845 912 4.76E-20 T 05-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AC028_RS05170 80ba5d9c6d82107debbc6c4bf5ca5427 251 Gene3D G3DSA:3.40.50.720 5 250 4.5E-81 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS05170 80ba5d9c6d82107debbc6c4bf5ca5427 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 8.4E-41 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS05170 80ba5d9c6d82107debbc6c4bf5ca5427 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 8.4E-41 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS05170 80ba5d9c6d82107debbc6c4bf5ca5427 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 8.4E-41 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS05170 80ba5d9c6d82107debbc6c4bf5ca5427 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 8.4E-41 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS05170 80ba5d9c6d82107debbc6c4bf5ca5427 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 8.4E-41 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS05170 80ba5d9c6d82107debbc6c4bf5ca5427 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 8.4E-41 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS05170 80ba5d9c6d82107debbc6c4bf5ca5427 251 SUPERFAMILY SSF51735 5 250 7.06E-76 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS05170 80ba5d9c6d82107debbc6c4bf5ca5427 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 248 9.1E-57 T 05-07-2017 AC028_RS05170 80ba5d9c6d82107debbc6c4bf5ca5427 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.1E-13 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS05170 80ba5d9c6d82107debbc6c4bf5ca5427 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.1E-13 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS05170 80ba5d9c6d82107debbc6c4bf5ca5427 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.1E-13 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS05170 80ba5d9c6d82107debbc6c4bf5ca5427 251 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 5 251 1.6E-124 T 05-07-2017 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 AC028_RS05170 80ba5d9c6d82107debbc6c4bf5ca5427 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 05-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AC028_RS17365 40da2896d87aa40d30db777f9ed96c22 213 Hamap MF_00015 LexA repressor [lexA]. 2 212 29.644 T 05-07-2017 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AC028_RS17365 40da2896d87aa40d30db777f9ed96c22 213 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 125 135 1.5E-8 T 05-07-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AC028_RS17365 40da2896d87aa40d30db777f9ed96c22 213 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 164 176 1.5E-8 T 05-07-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AC028_RS17365 40da2896d87aa40d30db777f9ed96c22 213 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 136 147 1.5E-8 T 05-07-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AC028_RS17365 40da2896d87aa40d30db777f9ed96c22 213 Gene3D G3DSA:1.10.10.10 2 68 9.3E-23 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS17365 40da2896d87aa40d30db777f9ed96c22 213 Pfam PF00717 Peptidase S24-like 128 193 3.1E-14 T 05-07-2017 IPR019759 Peptidase S24/S26A/S26B AC028_RS17365 40da2896d87aa40d30db777f9ed96c22 213 TIGRFAM TIGR00498 lexA: repressor LexA 2 211 1.7E-52 T 05-07-2017 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AC028_RS17365 40da2896d87aa40d30db777f9ed96c22 213 SUPERFAMILY SSF46785 1 68 1.32E-17 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS17365 40da2896d87aa40d30db777f9ed96c22 213 Pfam PF01726 LexA DNA binding domain 2 64 1.3E-18 T 05-07-2017 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AC028_RS17365 40da2896d87aa40d30db777f9ed96c22 213 Gene3D G3DSA:2.10.109.10 89 210 4.6E-38 T 05-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AC028_RS17365 40da2896d87aa40d30db777f9ed96c22 213 SUPERFAMILY SSF51306 88 210 5.58E-33 T 05-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C AC028_RS17290 11328b90d4535d0017fc2ba165da437c 181 SMART SM00463 95 179 1.6E-15 T 05-07-2017 IPR002625 Smr domain AC028_RS17290 11328b90d4535d0017fc2ba165da437c 181 SUPERFAMILY SSF160443 96 178 9.42E-18 T 05-07-2017 IPR002625 Smr domain AC028_RS17290 11328b90d4535d0017fc2ba165da437c 181 Pfam PF01713 Smr domain 98 178 7.1E-23 T 05-07-2017 IPR002625 Smr domain AC028_RS02775 55d780f36a8cf65facff48fa9729da91 452 Pfam PF08245 Mur ligase middle domain 109 294 7.4E-25 T 05-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AC028_RS02775 55d780f36a8cf65facff48fa9729da91 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 386 4.0E-10 T 05-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AC028_RS02775 55d780f36a8cf65facff48fa9729da91 452 Gene3D G3DSA:3.40.1190.10 94 315 3.0E-86 T 05-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AC028_RS02775 55d780f36a8cf65facff48fa9729da91 452 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 2 452 55.993 T 05-07-2017 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 AC028_RS02775 55d780f36a8cf65facff48fa9729da91 452 Gene3D G3DSA:3.40.50.720 1 91 1.5E-32 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS02775 55d780f36a8cf65facff48fa9729da91 452 SUPERFAMILY SSF53623 96 312 9.16E-53 T 05-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AC028_RS02775 55d780f36a8cf65facff48fa9729da91 452 Pfam PF01225 Mur ligase family, catalytic domain 4 98 3.9E-13 T 05-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AC028_RS02775 55d780f36a8cf65facff48fa9729da91 452 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 3 451 3.2E-187 T 05-07-2017 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 AC028_RS02775 55d780f36a8cf65facff48fa9729da91 452 SUPERFAMILY SSF53244 314 450 3.53E-34 T 05-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AC028_RS02775 55d780f36a8cf65facff48fa9729da91 452 SUPERFAMILY SSF51984 2 90 2.62E-18 T 05-07-2017 AC028_RS02775 55d780f36a8cf65facff48fa9729da91 452 Gene3D G3DSA:3.90.190.20 316 451 3.9E-33 T 05-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AC028_RS21290 da5cad4de60e5180964a2c88a999c7d3 118 SUPERFAMILY SSF46955 17 113 1.56E-17 T 05-07-2017 IPR009061 Putative DNA-binding domain AC028_RS21290 da5cad4de60e5180964a2c88a999c7d3 118 Pfam PF13411 MerR HTH family regulatory protein 19 86 1.2E-21 T 05-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AC028_RS21290 da5cad4de60e5180964a2c88a999c7d3 118 Gene3D G3DSA:1.10.1660.10 16 83 7.1E-16 T 05-07-2017 AC028_RS21290 da5cad4de60e5180964a2c88a999c7d3 118 SMART SM00422 19 89 2.2E-5 T 05-07-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AC028_RS19060 76bd7c0f23e59aaef1469469bc1d955d 130 Pfam PF00034 Cytochrome c 59 130 1.3E-7 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS19060 76bd7c0f23e59aaef1469469bc1d955d 130 SUPERFAMILY SSF46626 30 130 3.93E-19 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS19060 76bd7c0f23e59aaef1469469bc1d955d 130 Gene3D G3DSA:1.10.760.10 38 130 9.0E-22 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS10480 29ec9dd0ab2a97ab2efdbaab483dbcb4 200 SUPERFAMILY SSF63380 1 93 1.53E-23 T 05-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AC028_RS10480 29ec9dd0ab2a97ab2efdbaab483dbcb4 200 Pfam PF00677 Lumazine binding domain 100 184 2.2E-22 T 05-07-2017 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AC028_RS10480 29ec9dd0ab2a97ab2efdbaab483dbcb4 200 Pfam PF00677 Lumazine binding domain 3 87 1.3E-20 T 05-07-2017 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AC028_RS10480 29ec9dd0ab2a97ab2efdbaab483dbcb4 200 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 194 1.4E-60 T 05-07-2017 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AC028_RS10480 29ec9dd0ab2a97ab2efdbaab483dbcb4 200 PIRSF PIRSF000498 1 199 3.1E-74 T 05-07-2017 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AC028_RS10480 29ec9dd0ab2a97ab2efdbaab483dbcb4 200 SUPERFAMILY SSF63380 93 195 1.62E-32 T 05-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AC028_RS10480 29ec9dd0ab2a97ab2efdbaab483dbcb4 200 Gene3D G3DSA:2.40.30.20 5 104 2.6E-30 T 05-07-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 AC028_RS10480 29ec9dd0ab2a97ab2efdbaab483dbcb4 200 Gene3D G3DSA:2.40.30.20 105 195 5.7E-33 T 05-07-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 AC028_RS21045 56772bfb9a5f22684420912ab0e48d9e 545 Gene3D G3DSA:3.20.20.80 62 356 1.2E-33 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS21045 56772bfb9a5f22684420912ab0e48d9e 545 SUPERFAMILY SSF51445 59 356 4.3E-41 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS21045 56772bfb9a5f22684420912ab0e48d9e 545 Pfam PF01301 Glycosyl hydrolases family 35 50 245 2.0E-8 T 05-07-2017 IPR031330 Glycoside hydrolase 35, catalytic domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS04200 ca2dd238af966bd090b3cfaa05527000 245 SUPERFAMILY SSF56784 5 228 8.56E-45 T 05-07-2017 IPR023214 HAD-like domain AC028_RS04200 ca2dd238af966bd090b3cfaa05527000 245 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 88 193 3.3E-13 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS04200 ca2dd238af966bd090b3cfaa05527000 245 Gene3D G3DSA:3.40.50.1000 5 224 1.6E-35 T 05-07-2017 IPR023214 HAD-like domain AC028_RS04200 ca2dd238af966bd090b3cfaa05527000 245 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 199 1.0E-8 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS04200 ca2dd238af966bd090b3cfaa05527000 245 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 142 158 1.9E-5 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS04200 ca2dd238af966bd090b3cfaa05527000 245 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 188 201 1.9E-5 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS04200 ca2dd238af966bd090b3cfaa05527000 245 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 1.9E-5 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS04200 ca2dd238af966bd090b3cfaa05527000 245 Pfam PF13419 Haloacid dehalogenase-like hydrolase 50 199 3.0E-12 T 05-07-2017 IPR023214 HAD-like domain AC028_RS11765 245802e961753b40a5362c89d9cab0ea 127 Gene3D G3DSA:3.90.1030.10 1 117 4.9E-49 T 05-07-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11765 245802e961753b40a5362c89d9cab0ea 127 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 05-07-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11765 245802e961753b40a5362c89d9cab0ea 127 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.193 T 05-07-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11765 245802e961753b40a5362c89d9cab0ea 127 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 4.5E-46 T 05-07-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11765 245802e961753b40a5362c89d9cab0ea 127 SUPERFAMILY SSF64263 1 119 3.66E-50 T 05-07-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11765 245802e961753b40a5362c89d9cab0ea 127 Pfam PF01196 Ribosomal protein L17 20 116 9.9E-33 T 05-07-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS10530 e2d1f1be7548861a3d5f966c45662ec9 682 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 14 676 1.4E-284 T 05-07-2017 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 AC028_RS10530 e2d1f1be7548861a3d5f966c45662ec9 682 Gene3D G3DSA:3.40.1110.10 322 448 5.1E-45 T 05-07-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AC028_RS10530 e2d1f1be7548861a3d5f966c45662ec9 682 SUPERFAMILY SSF81665 211 302 1.7E-7 T 05-07-2017 AC028_RS10530 e2d1f1be7548861a3d5f966c45662ec9 682 SUPERFAMILY SSF81665 52 107 1.7E-7 T 05-07-2017 AC028_RS10530 e2d1f1be7548861a3d5f966c45662ec9 682 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 310 316 - T 05-07-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AC028_RS10530 e2d1f1be7548861a3d5f966c45662ec9 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 78 605 1.3E-73 T 05-07-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AC028_RS10530 e2d1f1be7548861a3d5f966c45662ec9 682 Pfam PF00122 E1-E2 ATPase 74 299 1.8E-42 T 05-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 AC028_RS10530 e2d1f1be7548861a3d5f966c45662ec9 682 SUPERFAMILY SSF81653 113 210 1.02E-21 T 05-07-2017 AC028_RS10530 e2d1f1be7548861a3d5f966c45662ec9 682 Gene3D G3DSA:3.40.50.1000 292 321 1.2E-34 T 05-07-2017 IPR023214 HAD-like domain AC028_RS10530 e2d1f1be7548861a3d5f966c45662ec9 682 Gene3D G3DSA:3.40.50.1000 449 559 1.2E-34 T 05-07-2017 IPR023214 HAD-like domain AC028_RS10530 e2d1f1be7548861a3d5f966c45662ec9 682 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 17 680 39.965 T 05-07-2017 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 AC028_RS10530 e2d1f1be7548861a3d5f966c45662ec9 682 Gene3D G3DSA:2.70.150.10 54 211 1.8E-24 T 05-07-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 AC028_RS10530 e2d1f1be7548861a3d5f966c45662ec9 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 551 2.1E-22 T 05-07-2017 AC028_RS10530 e2d1f1be7548861a3d5f966c45662ec9 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 473 2.1E-22 T 05-07-2017 AC028_RS10530 e2d1f1be7548861a3d5f966c45662ec9 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 535 2.1E-22 T 05-07-2017 AC028_RS10530 e2d1f1be7548861a3d5f966c45662ec9 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 157 171 2.1E-22 T 05-07-2017 AC028_RS10530 e2d1f1be7548861a3d5f966c45662ec9 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 308 322 2.1E-22 T 05-07-2017 AC028_RS10530 e2d1f1be7548861a3d5f966c45662ec9 682 Pfam PF00702 haloacid dehalogenase-like hydrolase 304 530 1.1E-33 T 05-07-2017 AC028_RS10530 e2d1f1be7548861a3d5f966c45662ec9 682 SUPERFAMILY SSF56784 304 319 2.06E-37 T 05-07-2017 IPR023214 HAD-like domain AC028_RS10530 e2d1f1be7548861a3d5f966c45662ec9 682 SUPERFAMILY SSF56784 346 564 2.06E-37 T 05-07-2017 IPR023214 HAD-like domain AC028_RS10145 e3b28f35258619dcf48b9d5f71446012 500 Pfam PF00072 Response regulator receiver domain 13 122 4.8E-17 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS10145 e3b28f35258619dcf48b9d5f71446012 500 Pfam PF00072 Response regulator receiver domain 383 459 1.6E-5 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS10145 e3b28f35258619dcf48b9d5f71446012 500 SMART SM00387 256 363 1.7E-27 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS10145 e3b28f35258619dcf48b9d5f71446012 500 SUPERFAMILY SSF52172 10 143 1.29E-26 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS10145 e3b28f35258619dcf48b9d5f71446012 500 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 259 361 1.8E-15 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS10145 e3b28f35258619dcf48b9d5f71446012 500 SUPERFAMILY SSF55874 206 362 4.98E-35 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS10145 e3b28f35258619dcf48b9d5f71446012 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 294 308 2.0E-17 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS10145 e3b28f35258619dcf48b9d5f71446012 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 341 2.0E-17 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS10145 e3b28f35258619dcf48b9d5f71446012 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 360 2.0E-17 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS10145 e3b28f35258619dcf48b9d5f71446012 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 322 2.0E-17 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS10145 e3b28f35258619dcf48b9d5f71446012 500 SUPERFAMILY SSF47384 145 213 4.9E-7 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS10145 e3b28f35258619dcf48b9d5f71446012 500 Gene3D G3DSA:3.30.565.10 217 361 1.7E-35 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS10145 e3b28f35258619dcf48b9d5f71446012 500 SMART SM00448 381 493 0.0082 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS10145 e3b28f35258619dcf48b9d5f71446012 500 SMART SM00448 11 122 1.2E-20 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS10145 e3b28f35258619dcf48b9d5f71446012 500 SMART SM00388 150 215 4.0E-4 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS10145 e3b28f35258619dcf48b9d5f71446012 500 Gene3D G3DSA:3.40.50.2300 378 498 8.9E-14 T 05-07-2017 AC028_RS10145 e3b28f35258619dcf48b9d5f71446012 500 SUPERFAMILY SSF52172 379 498 3.13E-15 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS10145 e3b28f35258619dcf48b9d5f71446012 500 Gene3D G3DSA:3.40.50.2300 10 141 1.0E-23 T 05-07-2017 AC028_RS21850 b8b06eb0d60425d5a4f61a874b50e413 586 SUPERFAMILY SSF51905 39 385 9.36E-53 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21850 b8b06eb0d60425d5a4f61a874b50e413 586 SUPERFAMILY SSF51905 420 446 9.36E-53 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21850 b8b06eb0d60425d5a4f61a874b50e413 586 Pfam PF01593 Flavin containing amine oxidoreductase 52 361 1.7E-16 T 05-07-2017 IPR002937 Amine oxidase GO:0016491|GO:0055114 AC028_RS21850 b8b06eb0d60425d5a4f61a874b50e413 586 Gene3D G3DSA:3.50.50.60 254 356 2.7E-38 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21850 b8b06eb0d60425d5a4f61a874b50e413 586 Gene3D G3DSA:3.50.50.60 41 93 2.7E-38 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21850 b8b06eb0d60425d5a4f61a874b50e413 586 Gene3D G3DSA:3.50.50.60 146 147 2.7E-38 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS05935 ac34b72cd682bad3f8d46ba7e6496c95 486 SUPERFAMILY SSF75304 51 473 4.97E-112 T 05-07-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AC028_RS05935 ac34b72cd682bad3f8d46ba7e6496c95 486 Gene3D G3DSA:3.90.1300.10 45 474 6.8E-117 T 05-07-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AC028_RS05935 ac34b72cd682bad3f8d46ba7e6496c95 486 Pfam PF01425 Amidase 64 464 2.4E-82 T 05-07-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AC028_RS05935 ac34b72cd682bad3f8d46ba7e6496c95 486 TIGRFAM TIGR02715 amido_AtzE: amidohydrolase, AtzE family 44 478 2.3E-192 T 05-07-2017 IPR014087 Amidohydrolase, AtzE type KEGG: 00791+3.5.1.84|MetaCyc: PWY-5169 AC028_RS05100 24f8723508fadfd4d76e8b5ef2b65d9a 727 Gene3D G3DSA:2.60.40.1180 622 725 4.4E-36 T 05-07-2017 IPR013780 Glycosyl hydrolase, all-beta AC028_RS05100 24f8723508fadfd4d76e8b5ef2b65d9a 727 SMART SM00642 250 603 6.4E-7 T 05-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AC028_RS05100 24f8723508fadfd4d76e8b5ef2b65d9a 727 SUPERFAMILY SSF81296 18 111 4.43E-17 T 05-07-2017 IPR014756 Immunoglobulin E-set AC028_RS05100 24f8723508fadfd4d76e8b5ef2b65d9a 727 Gene3D G3DSA:2.60.40.10 111 220 8.5E-37 T 05-07-2017 IPR013783 Immunoglobulin-like fold AC028_RS05100 24f8723508fadfd4d76e8b5ef2b65d9a 727 Gene3D G3DSA:2.60.40.10 16 103 8.7E-15 T 05-07-2017 IPR013783 Immunoglobulin-like fold AC028_RS05100 24f8723508fadfd4d76e8b5ef2b65d9a 727 PIRSF PIRSF000463 10 726 4.3E-289 T 05-07-2017 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AC028_RS05100 24f8723508fadfd4d76e8b5ef2b65d9a 727 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 99 726 44.746 T 05-07-2017 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AC028_RS05100 24f8723508fadfd4d76e8b5ef2b65d9a 727 SUPERFAMILY SSF51445 168 615 7.68E-114 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS05100 24f8723508fadfd4d76e8b5ef2b65d9a 727 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 627 724 5.1E-25 T 05-07-2017 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AC028_RS05100 24f8723508fadfd4d76e8b5ef2b65d9a 727 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 107 723 4.0E-277 T 05-07-2017 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AC028_RS05100 24f8723508fadfd4d76e8b5ef2b65d9a 727 Gene3D G3DSA:3.20.20.80 244 609 2.1E-91 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS05100 24f8723508fadfd4d76e8b5ef2b65d9a 727 Pfam PF00128 Alpha amylase, catalytic domain 265 346 6.1E-9 T 05-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AC028_RS05100 24f8723508fadfd4d76e8b5ef2b65d9a 727 SUPERFAMILY SSF51011 622 725 6.95E-34 T 05-07-2017 AC028_RS05100 24f8723508fadfd4d76e8b5ef2b65d9a 727 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 123 206 1.4E-22 T 05-07-2017 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AC028_RS11585 43759b18f1bd3b3c3170399f658480e0 142 SUPERFAMILY SSF46906 68 141 3.66E-24 T 05-07-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AC028_RS11585 43759b18f1bd3b3c3170399f658480e0 142 Gene3D G3DSA:1.10.10.250 73 141 3.4E-30 T 05-07-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AC028_RS11585 43759b18f1bd3b3c3170399f658480e0 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.1E-28 T 05-07-2017 IPR020784 Ribosomal protein L11, N-terminal AC028_RS11585 43759b18f1bd3b3c3170399f658480e0 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 4.2E-64 T 05-07-2017 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11585 43759b18f1bd3b3c3170399f658480e0 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 05-07-2017 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11585 43759b18f1bd3b3c3170399f658480e0 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.525 T 05-07-2017 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AC028_RS11585 43759b18f1bd3b3c3170399f658480e0 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 72 5.0E-15 T 05-07-2017 AC028_RS11585 43759b18f1bd3b3c3170399f658480e0 142 SMART SM00649 9 141 6.6E-82 T 05-07-2017 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AC028_RS11585 43759b18f1bd3b3c3170399f658480e0 142 SUPERFAMILY SSF54747 3 72 1.05E-28 T 05-07-2017 IPR020784 Ribosomal protein L11, N-terminal AC028_RS11585 43759b18f1bd3b3c3170399f658480e0 142 Gene3D G3DSA:3.30.1550.10 2 72 6.1E-36 T 05-07-2017 IPR020784 Ribosomal protein L11, N-terminal AC028_RS11585 43759b18f1bd3b3c3170399f658480e0 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 9.3E-24 T 05-07-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AC028_RS20095 00d68317d62a63e9bd86d54a46a99afc 384 PIRSF PIRSF000729 17 384 2.9E-133 T 05-07-2017 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AC028_RS20095 00d68317d62a63e9bd86d54a46a99afc 384 ProSitePatterns PS00902 Glutamate 5-kinase signature. 220 237 - T 05-07-2017 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AC028_RS20095 00d68317d62a63e9bd86d54a46a99afc 384 PRINTS PR00474 Glutamate 5-kinase family signature 222 242 1.7E-39 T 05-07-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 AC028_RS20095 00d68317d62a63e9bd86d54a46a99afc 384 PRINTS PR00474 Glutamate 5-kinase family signature 57 71 1.7E-39 T 05-07-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 AC028_RS20095 00d68317d62a63e9bd86d54a46a99afc 384 PRINTS PR00474 Glutamate 5-kinase family signature 161 188 1.7E-39 T 05-07-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 AC028_RS20095 00d68317d62a63e9bd86d54a46a99afc 384 PRINTS PR00474 Glutamate 5-kinase family signature 129 150 1.7E-39 T 05-07-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 AC028_RS20095 00d68317d62a63e9bd86d54a46a99afc 384 Hamap MF_00456 Glutamate 5-kinase [proB]. 20 271 34.489 T 05-07-2017 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AC028_RS20095 00d68317d62a63e9bd86d54a46a99afc 384 Gene3D G3DSA:2.30.130.10 289 382 4.6E-24 T 05-07-2017 IPR015947 PUA-like domain AC028_RS20095 00d68317d62a63e9bd86d54a46a99afc 384 TIGRFAM TIGR01027 proB: glutamate 5-kinase 21 382 6.6E-122 T 05-07-2017 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AC028_RS20095 00d68317d62a63e9bd86d54a46a99afc 384 Pfam PF01472 PUA domain 290 367 2.3E-22 T 05-07-2017 IPR002478 PUA domain GO:0003723 AC028_RS20095 00d68317d62a63e9bd86d54a46a99afc 384 SMART SM00359 290 376 1.4E-17 T 05-07-2017 IPR002478 PUA domain GO:0003723 AC028_RS20095 00d68317d62a63e9bd86d54a46a99afc 384 Gene3D G3DSA:3.40.1160.10 15 272 1.2E-52 T 05-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AC028_RS20095 00d68317d62a63e9bd86d54a46a99afc 384 SUPERFAMILY SSF88697 290 383 6.63E-22 T 05-07-2017 IPR015947 PUA-like domain AC028_RS20095 00d68317d62a63e9bd86d54a46a99afc 384 Pfam PF00696 Amino acid kinase family 21 248 6.4E-37 T 05-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AC028_RS20095 00d68317d62a63e9bd86d54a46a99afc 384 SUPERFAMILY SSF53633 20 269 7.46E-59 T 05-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AC028_RS01290 c9022f5c3db4f2625b42b372a8322bc4 878 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 33 878 4.3E-171 T 05-07-2017 IPR010104 Bacterial TonB-dependent receptor AC028_RS01290 c9022f5c3db4f2625b42b372a8322bc4 878 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 162 1.4E-15 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS01290 c9022f5c3db4f2625b42b372a8322bc4 878 SUPERFAMILY SSF56935 20 228 1.62E-90 T 05-07-2017 AC028_RS01290 c9022f5c3db4f2625b42b372a8322bc4 878 SUPERFAMILY SSF56935 264 475 1.62E-90 T 05-07-2017 AC028_RS01290 c9022f5c3db4f2625b42b372a8322bc4 878 SUPERFAMILY SSF56935 506 690 1.62E-90 T 05-07-2017 AC028_RS01290 c9022f5c3db4f2625b42b372a8322bc4 878 SUPERFAMILY SSF56935 724 878 1.62E-90 T 05-07-2017 AC028_RS01290 c9022f5c3db4f2625b42b372a8322bc4 878 Pfam PF00593 TonB dependent receptor 601 876 2.1E-35 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01290 c9022f5c3db4f2625b42b372a8322bc4 878 Gene3D G3DSA:2.40.170.20 166 476 1.5E-64 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01290 c9022f5c3db4f2625b42b372a8322bc4 878 Gene3D G3DSA:2.40.170.20 516 878 1.5E-64 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01290 c9022f5c3db4f2625b42b372a8322bc4 878 Gene3D G3DSA:2.170.130.10 53 165 1.0E-15 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS09340 ed3c8038da2cb8118b2015039e0b0f80 344 Gene3D G3DSA:2.115.10.20 13 330 6.2E-68 T 05-07-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AC028_RS09340 ed3c8038da2cb8118b2015039e0b0f80 344 SUPERFAMILY SSF75005 12 330 1.7E-55 T 05-07-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AC028_RS09340 ed3c8038da2cb8118b2015039e0b0f80 344 Pfam PF04616 Glycosyl hydrolases family 43 88 330 5.0E-25 T 05-07-2017 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AC028_RS16160 f5fac771a8216d7ad8a504e771a6184a 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 2.5E-25 T 05-07-2017 IPR005031 Coenzyme Q-binding protein COQ10, START domain AC028_RS16160 f5fac771a8216d7ad8a504e771a6184a 143 Gene3D G3DSA:3.30.530.20 1 139 3.4E-34 T 05-07-2017 IPR023393 START-like domain AC028_RS16160 f5fac771a8216d7ad8a504e771a6184a 143 SUPERFAMILY SSF55961 1 140 3.06E-33 T 05-07-2017 AC028_RS18800 a312f67fa868c3a4251e099cb49c5d1d 141 SUPERFAMILY SSF54919 1 140 4.45E-55 T 05-07-2017 AC028_RS18800 a312f67fa868c3a4251e099cb49c5d1d 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.184 T 05-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AC028_RS18800 a312f67fa868c3a4251e099cb49c5d1d 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 05-07-2017 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AC028_RS18800 a312f67fa868c3a4251e099cb49c5d1d 141 SMART SM00562 3 140 2.5E-83 T 05-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AC028_RS18800 a312f67fa868c3a4251e099cb49c5d1d 141 Pfam PF00334 Nucleoside diphosphate kinase 4 137 2.3E-53 T 05-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AC028_RS18800 a312f67fa868c3a4251e099cb49c5d1d 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.3E-40 T 05-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AC028_RS18800 a312f67fa868c3a4251e099cb49c5d1d 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.3E-40 T 05-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AC028_RS18800 a312f67fa868c3a4251e099cb49c5d1d 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.3E-40 T 05-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AC028_RS18800 a312f67fa868c3a4251e099cb49c5d1d 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.3E-40 T 05-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AC028_RS18800 a312f67fa868c3a4251e099cb49c5d1d 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.3E-40 T 05-07-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AC028_RS18800 a312f67fa868c3a4251e099cb49c5d1d 141 Gene3D G3DSA:3.30.70.141 1 140 3.6E-57 T 05-07-2017 AC028_RS12820 7cb06715a05756f5fed616091e249b84 672 Pfam PF01401 Angiotensin-converting enzyme 40 654 1.1E-187 T 05-07-2017 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AC028_RS12820 7cb06715a05756f5fed616091e249b84 672 SUPERFAMILY SSF55486 40 312 9.99E-188 T 05-07-2017 AC028_RS12820 7cb06715a05756f5fed616091e249b84 672 SUPERFAMILY SSF55486 343 655 9.99E-188 T 05-07-2017 AC028_RS06290 ad80d701397a978d44574c193cb32518 286 Gene3D G3DSA:3.30.200.20 17 125 1.2E-9 T 05-07-2017 AC028_RS06290 ad80d701397a978d44574c193cb32518 286 Gene3D G3DSA:1.10.510.10 139 217 3.4E-18 T 05-07-2017 AC028_RS06290 ad80d701397a978d44574c193cb32518 286 SUPERFAMILY SSF56112 18 205 8.53E-19 T 05-07-2017 IPR011009 Protein kinase-like domain AC028_RS06290 ad80d701397a978d44574c193cb32518 286 SMART SM00090 2 235 2.5E-9 T 05-07-2017 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|Reactome: R-HSA-6791226 AC028_RS06290 ad80d701397a978d44574c193cb32518 286 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 05-07-2017 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|Reactome: R-HSA-6791226 AC028_RS06290 ad80d701397a978d44574c193cb32518 286 Pfam PF01163 RIO1 family 31 221 1.6E-35 T 05-07-2017 AC028_RS02705 581b7804ec60770b5216707317303e14 400 Pfam PF00155 Aminotransferase class I and II 53 364 1.3E-39 T 05-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AC028_RS02705 581b7804ec60770b5216707317303e14 400 Gene3D G3DSA:3.40.640.10 61 269 1.0E-52 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS02705 581b7804ec60770b5216707317303e14 400 Gene3D G3DSA:3.90.1150.10 270 370 9.2E-15 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS02705 581b7804ec60770b5216707317303e14 400 SUPERFAMILY SSF53383 49 369 1.08E-62 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS20920 2e8e3a649b133138e1294629e2aa7e46 586 ProSitePatterns PS00698 Glycosyl hydrolases family 9 active sites signature 2. 554 572 - T 05-07-2017 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AC028_RS20920 2e8e3a649b133138e1294629e2aa7e46 586 Gene3D G3DSA:2.60.40.10 29 126 1.7E-23 T 05-07-2017 IPR013783 Immunoglobulin-like fold AC028_RS20920 2e8e3a649b133138e1294629e2aa7e46 586 Pfam PF00759 Glycosyl hydrolase family 9 130 577 1.6E-90 T 05-07-2017 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AC028_RS20920 2e8e3a649b133138e1294629e2aa7e46 586 SUPERFAMILY SSF81296 29 125 7.7E-19 T 05-07-2017 IPR014756 Immunoglobulin E-set AC028_RS20920 2e8e3a649b133138e1294629e2aa7e46 586 ProSitePatterns PS00592 Glycosyl hydrolases family 9 active sites signature 1. 496 512 - T 05-07-2017 IPR018221 Glycoside hydrolase family 9, His active site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AC028_RS20920 2e8e3a649b133138e1294629e2aa7e46 586 Gene3D G3DSA:1.50.10.10 129 582 3.0E-141 T 05-07-2017 IPR012341 Six-hairpin glycosidase GO:0003824 AC028_RS20920 2e8e3a649b133138e1294629e2aa7e46 586 SUPERFAMILY SSF48208 128 581 6.32E-120 T 05-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AC028_RS20920 2e8e3a649b133138e1294629e2aa7e46 586 Pfam PF02927 Cellulase N-terminal ig-like domain 34 117 4.2E-18 T 05-07-2017 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 AC028_RS18705 a80e50527416fe23591c0cf4695cdfdb 204 Gene3D G3DSA:1.10.3890.10 3 203 2.0E-64 T 05-07-2017 IPR007451 Uncharacterised protein family UPF0274 AC028_RS18705 a80e50527416fe23591c0cf4695cdfdb 204 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 204 30.523 T 05-07-2017 IPR007451 Uncharacterised protein family UPF0274 AC028_RS18705 a80e50527416fe23591c0cf4695cdfdb 204 Pfam PF04356 Protein of unknown function (DUF489) 8 196 3.9E-60 T 05-07-2017 IPR007451 Uncharacterised protein family UPF0274 AC028_RS18705 a80e50527416fe23591c0cf4695cdfdb 204 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 25 195 2.0E-80 T 05-07-2017 IPR007451 Uncharacterised protein family UPF0274 AC028_RS18705 a80e50527416fe23591c0cf4695cdfdb 204 SUPERFAMILY SSF101322 3 203 3.4E-61 T 05-07-2017 IPR007451 Uncharacterised protein family UPF0274 AC028_RS05715 9f5ceea925e64feb0319a14979603255 675 Gene3D G3DSA:3.40.50.20 15 141 3.2E-54 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS05715 9f5ceea925e64feb0319a14979603255 675 SUPERFAMILY SSF52440 12 126 7.91E-50 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS05715 9f5ceea925e64feb0319a14979603255 675 SMART SM00878 349 456 2.8E-54 T 05-07-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS05715 9f5ceea925e64feb0319a14979603255 675 Gene3D G3DSA:3.30.1490.20 142 215 1.0E-27 T 05-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AC028_RS05715 9f5ceea925e64feb0319a14979603255 675 Pfam PF00289 Biotin carboxylase, N-terminal domain 15 123 8.8E-46 T 05-07-2017 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS05715 9f5ceea925e64feb0319a14979603255 675 Pfam PF00364 Biotin-requiring enzyme 605 669 4.6E-13 T 05-07-2017 IPR000089 Biotin/lipoyl attachment AC028_RS05715 9f5ceea925e64feb0319a14979603255 675 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 166 180 - T 05-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AC028_RS05715 9f5ceea925e64feb0319a14979603255 675 SUPERFAMILY SSF51230 597 669 1.31E-18 T 05-07-2017 IPR011053 Single hybrid motif AC028_RS05715 9f5ceea925e64feb0319a14979603255 675 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 299 306 - T 05-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AC028_RS05715 9f5ceea925e64feb0319a14979603255 675 Gene3D G3DSA:2.40.50.100 602 670 7.4E-22 T 05-07-2017 AC028_RS05715 9f5ceea925e64feb0319a14979603255 675 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 335 2.1E-73 T 05-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AC028_RS05715 9f5ceea925e64feb0319a14979603255 675 Gene3D G3DSA:3.30.470.20 217 462 3.1E-100 T 05-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AC028_RS05715 9f5ceea925e64feb0319a14979603255 675 Pfam PF02785 Biotin carboxylase C-terminal domain 349 457 1.2E-36 T 05-07-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS05715 9f5ceea925e64feb0319a14979603255 675 SUPERFAMILY SSF56059 96 356 8.66E-68 T 05-07-2017 AC028_RS05715 9f5ceea925e64feb0319a14979603255 675 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 627 644 - T 05-07-2017 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS05715 9f5ceea925e64feb0319a14979603255 675 SUPERFAMILY SSF51246 344 461 2.46E-37 T 05-07-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS16950 f516978b9ff9e733096372bbab45ba05 155 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 75 152 4.4E-16 T 05-07-2017 IPR006260 TonB, C-terminal GO:0006810 AC028_RS16950 f516978b9ff9e733096372bbab45ba05 155 Gene3D G3DSA:3.30.1150.10 74 154 1.4E-11 T 05-07-2017 AC028_RS16950 f516978b9ff9e733096372bbab45ba05 155 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 75 152 2.5E-17 T 05-07-2017 IPR006260 TonB, C-terminal GO:0006810 AC028_RS16950 f516978b9ff9e733096372bbab45ba05 155 SUPERFAMILY SSF74653 73 151 2.09E-17 T 05-07-2017 AC028_RS11950 37a860db59744c5a3773d8c4377fdad7 488 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 464 43.798 T 05-07-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AC028_RS11950 37a860db59744c5a3773d8c4377fdad7 488 Gene3D G3DSA:3.40.50.2020 270 439 1.9E-41 T 05-07-2017 IPR029057 Phosphoribosyltransferase-like AC028_RS11950 37a860db59744c5a3773d8c4377fdad7 488 SUPERFAMILY SSF56235 2 255 1.37E-65 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS11950 37a860db59744c5a3773d8c4377fdad7 488 SUPERFAMILY SSF53271 248 473 1.48E-68 T 05-07-2017 IPR029057 Phosphoribosyltransferase-like AC028_RS11950 37a860db59744c5a3773d8c4377fdad7 488 Pfam PF13522 Glutamine amidotransferase domain 61 193 2.3E-15 T 05-07-2017 AC028_RS11950 37a860db59744c5a3773d8c4377fdad7 488 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 462 6.9E-161 T 05-07-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AC028_RS11950 37a860db59744c5a3773d8c4377fdad7 488 Gene3D G3DSA:3.60.20.10 2 256 5.0E-59 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS11950 37a860db59744c5a3773d8c4377fdad7 488 PIRSF PIRSF000485 1 476 5.1E-156 T 05-07-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AC028_RS18010 cd8ca84e728f537bb5ff51a3447e1c38 505 Pfam PF01336 OB-fold nucleic acid binding domain 70 145 3.0E-14 T 05-07-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AC028_RS18010 cd8ca84e728f537bb5ff51a3447e1c38 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 163 501 1.6E-81 T 05-07-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS18010 cd8ca84e728f537bb5ff51a3447e1c38 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 2.8E-39 T 05-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AC028_RS18010 cd8ca84e728f537bb5ff51a3447e1c38 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 2.8E-39 T 05-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AC028_RS18010 cd8ca84e728f537bb5ff51a3447e1c38 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 2.8E-39 T 05-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AC028_RS18010 cd8ca84e728f537bb5ff51a3447e1c38 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 2.8E-39 T 05-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AC028_RS18010 cd8ca84e728f537bb5ff51a3447e1c38 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 2.8E-39 T 05-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AC028_RS18010 cd8ca84e728f537bb5ff51a3447e1c38 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 20 504 43.76 T 05-07-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AC028_RS18010 cd8ca84e728f537bb5ff51a3447e1c38 505 SUPERFAMILY SSF55681 162 502 2.58E-117 T 05-07-2017 AC028_RS18010 cd8ca84e728f537bb5ff51a3447e1c38 505 Gene3D G3DSA:2.40.50.140 15 154 7.8E-42 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS18010 cd8ca84e728f537bb5ff51a3447e1c38 505 SUPERFAMILY SSF50249 13 155 6.0E-38 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS18010 cd8ca84e728f537bb5ff51a3447e1c38 505 Gene3D G3DSA:3.30.930.10 157 499 3.2E-118 T 05-07-2017 AC028_RS18010 cd8ca84e728f537bb5ff51a3447e1c38 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 504 1.8E-198 T 05-07-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AC028_RS16940 3b7fd0fabd25a4f59d76c131b244a4c3 402 Gene3D G3DSA:3.30.70.260 314 399 3.2E-30 T 05-07-2017 AC028_RS16940 3b7fd0fabd25a4f59d76c131b244a4c3 402 Pfam PF00800 Prephenate dehydratase 134 310 2.4E-59 T 05-07-2017 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AC028_RS16940 3b7fd0fabd25a4f59d76c131b244a4c3 402 SMART SM00830 51 132 4.8E-28 T 05-07-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AC028_RS16940 3b7fd0fabd25a4f59d76c131b244a4c3 402 SUPERFAMILY SSF48600 47 135 9.62E-20 T 05-07-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AC028_RS16940 3b7fd0fabd25a4f59d76c131b244a4c3 402 Pfam PF01842 ACT domain 320 384 7.3E-12 T 05-07-2017 IPR002912 ACT domain GO:0008152|GO:0016597 AC028_RS16940 3b7fd0fabd25a4f59d76c131b244a4c3 402 Gene3D G3DSA:3.40.190.10 219 297 4.3E-21 T 05-07-2017 AC028_RS16940 3b7fd0fabd25a4f59d76c131b244a4c3 402 SUPERFAMILY SSF55021 304 399 1.93E-28 T 05-07-2017 AC028_RS16940 3b7fd0fabd25a4f59d76c131b244a4c3 402 Gene3D G3DSA:1.20.59.10 41 129 2.2E-21 T 05-07-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AC028_RS16940 3b7fd0fabd25a4f59d76c131b244a4c3 402 Gene3D G3DSA:3.40.190.10 130 218 2.4E-30 T 05-07-2017 AC028_RS16940 3b7fd0fabd25a4f59d76c131b244a4c3 402 PIRSF PIRSF001500 41 401 9.1E-139 T 05-07-2017 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AC028_RS16940 3b7fd0fabd25a4f59d76c131b244a4c3 402 Pfam PF01817 Chorismate mutase type II 51 130 4.5E-21 T 05-07-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AC028_RS16940 3b7fd0fabd25a4f59d76c131b244a4c3 402 TIGRFAM TIGR01807 CM_P2: chorismate mutase 47 122 5.0E-23 T 05-07-2017 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 AC028_RS16940 3b7fd0fabd25a4f59d76c131b244a4c3 402 SUPERFAMILY SSF53850 133 317 2.61E-53 T 05-07-2017 AC028_RS16990 03946ad66d1a12dcd9ae2e5453737469 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 150 165 8.1E-10 T 05-07-2017 AC028_RS16990 03946ad66d1a12dcd9ae2e5453737469 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 8.1E-10 T 05-07-2017 AC028_RS16990 03946ad66d1a12dcd9ae2e5453737469 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 8.1E-10 T 05-07-2017 AC028_RS16990 03946ad66d1a12dcd9ae2e5453737469 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 8.1E-10 T 05-07-2017 AC028_RS16990 03946ad66d1a12dcd9ae2e5453737469 396 SUPERFAMILY SSF51905 269 369 3.98E-49 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS16990 03946ad66d1a12dcd9ae2e5453737469 396 SUPERFAMILY SSF51905 4 171 3.98E-49 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS16990 03946ad66d1a12dcd9ae2e5453737469 396 Pfam PF01494 FAD binding domain 5 322 7.1E-21 T 05-07-2017 IPR002938 FAD-binding domain GO:0071949 AC028_RS16990 03946ad66d1a12dcd9ae2e5453737469 396 Gene3D G3DSA:3.50.50.60 3 178 1.4E-28 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS16990 03946ad66d1a12dcd9ae2e5453737469 396 Gene3D G3DSA:3.50.50.60 270 342 1.4E-28 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS02460 eaa5305edde62daba38d7e3e26796efa 649 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 588 621 - T 05-07-2017 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AC028_RS02460 eaa5305edde62daba38d7e3e26796efa 649 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 186 642 4.2E-159 T 05-07-2017 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 AC028_RS02460 eaa5305edde62daba38d7e3e26796efa 649 Pfam PF07660 Secretin and TonB N terminus short domain 212 258 2.6E-8 T 05-07-2017 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AC028_RS02460 eaa5305edde62daba38d7e3e26796efa 649 PRINTS PR00811 Bacterial general secretion pathway protein D signature 473 497 1.1E-16 T 05-07-2017 IPR001775 GspD/PilQ family AC028_RS02460 eaa5305edde62daba38d7e3e26796efa 649 PRINTS PR00811 Bacterial general secretion pathway protein D signature 630 644 1.1E-16 T 05-07-2017 IPR001775 GspD/PilQ family AC028_RS02460 eaa5305edde62daba38d7e3e26796efa 649 PRINTS PR00811 Bacterial general secretion pathway protein D signature 607 625 1.1E-16 T 05-07-2017 IPR001775 GspD/PilQ family AC028_RS02460 eaa5305edde62daba38d7e3e26796efa 649 PRINTS PR00811 Bacterial general secretion pathway protein D signature 371 381 1.1E-16 T 05-07-2017 IPR001775 GspD/PilQ family AC028_RS02460 eaa5305edde62daba38d7e3e26796efa 649 Pfam PF03958 Bacterial type II/III secretion system short domain 286 371 6.4E-15 T 05-07-2017 IPR005644 NolW-like AC028_RS02460 eaa5305edde62daba38d7e3e26796efa 649 Pfam PF00263 Bacterial type II and III secretion system protein 477 643 6.4E-49 T 05-07-2017 IPR004846 Type II/III secretion system GO:0009306 AC028_RS02460 eaa5305edde62daba38d7e3e26796efa 649 SMART SM00965 211 259 2.0E-10 T 05-07-2017 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 185 4.0E-69 T 05-07-2017 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 443 450 4.0E-69 T 05-07-2017 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 280 4.0E-69 T 05-07-2017 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 565 585 4.0E-69 T 05-07-2017 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 478 499 4.0E-69 T 05-07-2017 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 400 414 4.0E-69 T 05-07-2017 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 543 558 4.0E-69 T 05-07-2017 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 159 4.0E-69 T 05-07-2017 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 332 4.0E-69 T 05-07-2017 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 137 463 2.3E-68 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 307 325 1.0E-39 T 05-07-2017 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 157 1.0E-39 T 05-07-2017 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 428 450 1.0E-39 T 05-07-2017 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 399 415 1.0E-39 T 05-07-2017 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 286 1.0E-39 T 05-07-2017 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 Gene3D G3DSA:3.50.50.60 135 271 4.1E-39 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 Pfam PF00364 Biotin-requiring enzyme 5 74 4.1E-20 T 05-07-2017 IPR000089 Biotin/lipoyl attachment AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 05-07-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 171 181 - T 05-07-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 SUPERFAMILY SSF55424 480 601 8.59E-39 T 05-07-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 482 590 7.1E-35 T 05-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 Gene3D G3DSA:3.50.50.60 272 469 7.8E-56 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 Gene3D G3DSA:3.30.390.30 470 597 1.1E-44 T 05-07-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 SUPERFAMILY SSF51230 2 95 4.06E-23 T 05-07-2017 IPR011053 Single hybrid motif AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 137 594 1.7E-153 T 05-07-2017 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 Gene3D G3DSA:2.40.50.100 4 81 6.2E-22 T 05-07-2017 AC028_RS14775 baf1f233d67420d283f1a2863109bc12 607 SUPERFAMILY SSF51905 136 516 3.62E-62 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21970 57c27be5745075dee77281847f56d46d 192 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 3 171 23.507 T 05-07-2017 IPR006839 Ribosome-associated, YjgA AC028_RS21970 57c27be5745075dee77281847f56d46d 192 SUPERFAMILY SSF158710 26 170 1.83E-46 T 05-07-2017 AC028_RS21970 57c27be5745075dee77281847f56d46d 192 PIRSF PIRSF016183 1 175 1.3E-68 T 05-07-2017 IPR006839 Ribosome-associated, YjgA AC028_RS21970 57c27be5745075dee77281847f56d46d 192 Gene3D G3DSA:1.10.60.30 25 96 3.9E-25 T 05-07-2017 IPR023153 PSPTO4464-like domain AC028_RS21970 57c27be5745075dee77281847f56d46d 192 Gene3D G3DSA:1.10.60.30 103 174 9.4E-33 T 05-07-2017 IPR023153 PSPTO4464-like domain AC028_RS21970 57c27be5745075dee77281847f56d46d 192 Pfam PF04751 Protein of unknown function (DUF615) 14 167 3.6E-49 T 05-07-2017 IPR006839 Ribosome-associated, YjgA AC028_RS16770 3f9fa7244a54d8e6f1a1fd4a8b83e840 464 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 457 7.2E-80 T 05-07-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS16770 3f9fa7244a54d8e6f1a1fd4a8b83e840 464 SUPERFAMILY SSF50249 16 100 2.57E-16 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS16770 3f9fa7244a54d8e6f1a1fd4a8b83e840 464 Gene3D G3DSA:3.30.930.10 107 460 5.0E-108 T 05-07-2017 AC028_RS16770 3f9fa7244a54d8e6f1a1fd4a8b83e840 464 Gene3D G3DSA:2.40.50.140 16 102 4.7E-15 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS16770 3f9fa7244a54d8e6f1a1fd4a8b83e840 464 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 16 464 6.6E-189 T 05-07-2017 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AC028_RS16770 3f9fa7244a54d8e6f1a1fd4a8b83e840 464 Pfam PF01336 OB-fold nucleic acid binding domain 20 95 9.9E-10 T 05-07-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AC028_RS16770 3f9fa7244a54d8e6f1a1fd4a8b83e840 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 206 218 9.2E-14 T 05-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS16770 3f9fa7244a54d8e6f1a1fd4a8b83e840 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 379 395 9.2E-14 T 05-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS16770 3f9fa7244a54d8e6f1a1fd4a8b83e840 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 222 235 9.2E-14 T 05-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS16770 3f9fa7244a54d8e6f1a1fd4a8b83e840 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 419 433 9.2E-14 T 05-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS16770 3f9fa7244a54d8e6f1a1fd4a8b83e840 464 SUPERFAMILY SSF55681 104 462 9.95E-93 T 05-07-2017 AC028_RS16770 3f9fa7244a54d8e6f1a1fd4a8b83e840 464 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 4 464 44.976 T 05-07-2017 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 AC028_RS12025 fd92e8867294becd3d47076908f4b4dd 335 SUPERFAMILY SSF53659 1 335 2.3E-123 T 05-07-2017 AC028_RS12025 fd92e8867294becd3d47076908f4b4dd 335 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 325 7.0E-105 T 05-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AC028_RS12025 fd92e8867294becd3d47076908f4b4dd 335 Gene3D G3DSA:3.40.718.10 1 335 7.4E-133 T 05-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AC028_RS12025 fd92e8867294becd3d47076908f4b4dd 335 SMART SM01329 4 331 1.8E-178 T 05-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AC028_RS12025 fd92e8867294becd3d47076908f4b4dd 335 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 227 246 - T 05-07-2017 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AC028_RS17715 664b95a36ade219d91f9a2b745387067 351 Gene3D G3DSA:3.20.20.70 1 338 1.1E-125 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS17715 664b95a36ade219d91f9a2b745387067 351 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 05-07-2017 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AC028_RS17715 664b95a36ade219d91f9a2b745387067 351 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 05-07-2017 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AC028_RS17715 664b95a36ade219d91f9a2b745387067 351 SUPERFAMILY SSF51395 1 338 1.13E-101 T 05-07-2017 AC028_RS17715 664b95a36ade219d91f9a2b745387067 351 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 336 50.003 T 05-07-2017 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AC028_RS17715 664b95a36ade219d91f9a2b745387067 351 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 340 5.4E-126 T 05-07-2017 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AC028_RS17715 664b95a36ade219d91f9a2b745387067 351 PIRSF PIRSF000164 12 344 1.8E-97 T 05-07-2017 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 AC028_RS17715 664b95a36ade219d91f9a2b745387067 351 Pfam PF01180 Dihydroorotate dehydrogenase 48 333 5.8E-90 T 05-07-2017 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AC028_RS18130 0634b6bdf46a934327db7321aa3623eb 753 SMART SM00304 305 356 110.0 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18130 0634b6bdf46a934327db7321aa3623eb 753 SMART SM00304 395 447 11.0 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18130 0634b6bdf46a934327db7321aa3623eb 753 SMART SM00304 214 266 6.8E-8 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18130 0634b6bdf46a934327db7321aa3623eb 753 SMART SM00283 448 695 4.9E-92 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18130 0634b6bdf46a934327db7321aa3623eb 753 SUPERFAMILY SSF158472 214 265 8.5E-9 T 05-07-2017 AC028_RS18130 0634b6bdf46a934327db7321aa3623eb 753 SUPERFAMILY SSF58104 415 697 3.27E-71 T 05-07-2017 AC028_RS18130 0634b6bdf46a934327db7321aa3623eb 753 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 469 498 1.8E-58 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18130 0634b6bdf46a934327db7321aa3623eb 753 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 575 604 1.8E-58 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18130 0634b6bdf46a934327db7321aa3623eb 753 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 623 652 1.8E-58 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18130 0634b6bdf46a934327db7321aa3623eb 753 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 546 573 1.8E-58 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18130 0634b6bdf46a934327db7321aa3623eb 753 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 502 694 8.4E-62 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18130 0634b6bdf46a934327db7321aa3623eb 753 Pfam PF00672 HAMP domain 195 262 4.6E-13 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18130 0634b6bdf46a934327db7321aa3623eb 753 Gene3D G3DSA:1.10.287.950 463 667 2.6E-61 T 05-07-2017 AC028_RS18130 0634b6bdf46a934327db7321aa3623eb 753 Pfam PF12729 Four helix bundle sensory module for signal transduction 8 181 5.6E-17 T 05-07-2017 IPR024478 4HB MCP domain AC028_RS00640 fe4416490a70e04bb25d8add00c1ba3d 330 Pfam PF13365 Trypsin-like peptidase domain 133 287 7.6E-8 T 05-07-2017 AC028_RS00640 fe4416490a70e04bb25d8add00c1ba3d 330 Gene3D G3DSA:2.40.10.10 122 249 3.8E-43 T 05-07-2017 AC028_RS00640 fe4416490a70e04bb25d8add00c1ba3d 330 SUPERFAMILY SSF50494 97 327 3.46E-38 T 05-07-2017 IPR009003 Peptidase S1, PA clan AC028_RS19485 12bfdd05312f88172760efc5afed9144 200 SUPERFAMILY SSF53335 8 149 5.05E-22 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS19485 12bfdd05312f88172760efc5afed9144 200 Gene3D G3DSA:3.40.50.150 3 154 2.5E-17 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS19485 12bfdd05312f88172760efc5afed9144 200 Pfam PF05401 Nodulation protein S (NodS) 16 142 2.6E-13 T 05-07-2017 IPR008715 SAM-dependent methyltransferase, NodS-related GO:0008757|GO:0009312|GO:0009877 AC028_RS00565 4fdb549d9ad06528ed54dec0cbd65e3d 409 Gene3D G3DSA:3.20.20.140 22 408 2.2E-70 T 05-07-2017 AC028_RS00565 4fdb549d9ad06528ed54dec0cbd65e3d 409 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 63 405 9.2E-45 T 05-07-2017 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 AC028_RS00565 4fdb549d9ad06528ed54dec0cbd65e3d 409 SUPERFAMILY SSF51556 28 408 2.82E-49 T 05-07-2017 IPR032466 Metal-dependent hydrolase AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 SUPERFAMILY SSF81767 227 364 2.09E-42 T 05-07-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 Gene3D G3DSA:3.40.50.300 365 412 2.8E-129 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 Gene3D G3DSA:3.40.50.300 2 228 2.8E-129 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 829 20.05 T 05-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 SMART SM00958 228 354 8.7E-75 T 05-07-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 Gene3D G3DSA:3.90.1440.10 230 364 2.0E-44 T 05-07-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 Pfam PF07517 SecA DEAD-like domain 7 398 6.9E-134 T 05-07-2017 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 Pfam PF01043 SecA preprotein cross-linking domain 233 354 1.1E-37 T 05-07-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 815 0.0 T 05-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 SUPERFAMILY SSF52540 364 411 8.82E-86 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 SUPERFAMILY SSF52540 6 228 8.82E-86 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 Pfam PF02810 SEC-C motif 892 910 1.1E-10 T 05-07-2017 IPR004027 SEC-C motif AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 SMART SM00957 6 398 0.0 T 05-07-2017 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 Pfam PF07516 SecA Wing and Scaffold domain 615 826 4.8E-64 T 05-07-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 SUPERFAMILY SSF81886 888 900 5.89E-79 T 05-07-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 SUPERFAMILY SSF81886 618 837 5.89E-79 T 05-07-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 Gene3D G3DSA:1.10.3060.10 645 828 1.8E-56 T 05-07-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 PRINTS PR00906 SecA protein signature 101 115 1.3E-71 T 05-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 PRINTS PR00906 SecA protein signature 409 422 1.3E-71 T 05-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 PRINTS PR00906 SecA protein signature 63 87 1.3E-71 T 05-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 PRINTS PR00906 SecA protein signature 170 190 1.3E-71 T 05-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 PRINTS PR00906 SecA protein signature 372 389 1.3E-71 T 05-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 PRINTS PR00906 SecA protein signature 117 127 1.3E-71 T 05-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 PRINTS PR00906 SecA protein signature 335 357 1.3E-71 T 05-07-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 ProSitePatterns PS01312 SecA family signature. 496 511 - T 05-07-2017 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 Gene3D G3DSA:3.40.50.300 413 616 3.3E-90 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10680 c20c02e79095ac2132f43d3859f436d2 912 SUPERFAMILY SSF52540 412 615 1.55E-58 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS09460 e9c0f375489fbf2c1be2ed048f968757 640 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 133 156 - T 05-07-2017 IPR025505 FHIPEP conserved site AC028_RS09460 e9c0f375489fbf2c1be2ed048f968757 640 Pfam PF00771 FHIPEP family 432 630 6.6E-46 T 05-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AC028_RS09460 e9c0f375489fbf2c1be2ed048f968757 640 Pfam PF00771 FHIPEP family 22 426 9.4E-156 T 05-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AC028_RS09460 e9c0f375489fbf2c1be2ed048f968757 640 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 177 194 9.7E-50 T 05-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AC028_RS09460 e9c0f375489fbf2c1be2ed048f968757 640 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 128 144 9.7E-50 T 05-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AC028_RS09460 e9c0f375489fbf2c1be2ed048f968757 640 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 66 85 9.7E-50 T 05-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AC028_RS09460 e9c0f375489fbf2c1be2ed048f968757 640 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 147 165 9.7E-50 T 05-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AC028_RS09460 e9c0f375489fbf2c1be2ed048f968757 640 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 29 42 9.7E-50 T 05-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AC028_RS09460 e9c0f375489fbf2c1be2ed048f968757 640 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 228 242 9.7E-50 T 05-07-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AC028_RS20485 33c1346b3e39901f4f529acc6d133864 361 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 192 352 5.9E-16 T 05-07-2017 IPR000160 GGDEF domain AC028_RS20485 33c1346b3e39901f4f529acc6d133864 361 Gene3D G3DSA:3.30.70.270 197 355 5.2E-27 T 05-07-2017 AC028_RS20485 33c1346b3e39901f4f529acc6d133864 361 SUPERFAMILY SSF55781 53 187 1.89E-22 T 05-07-2017 IPR029016 GAF domain-like AC028_RS20485 33c1346b3e39901f4f529acc6d133864 361 SMART SM00065 48 192 3.3E-6 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS20485 33c1346b3e39901f4f529acc6d133864 361 Gene3D G3DSA:3.30.450.40 59 183 1.7E-8 T 05-07-2017 IPR029016 GAF domain-like AC028_RS20485 33c1346b3e39901f4f529acc6d133864 361 Pfam PF00990 Diguanylate cyclase, GGDEF domain 195 350 9.1E-21 T 05-07-2017 IPR000160 GGDEF domain AC028_RS20485 33c1346b3e39901f4f529acc6d133864 361 SMART SM00267 184 354 7.6E-20 T 05-07-2017 IPR000160 GGDEF domain AC028_RS20485 33c1346b3e39901f4f529acc6d133864 361 SUPERFAMILY SSF55073 200 355 6.91E-23 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS14755 5b9a2b0bbba4e3a1bb8e826074b77899 186 Pfam PF03167 Uracil DNA glycosylase superfamily 28 179 1.2E-11 T 05-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AC028_RS14755 5b9a2b0bbba4e3a1bb8e826074b77899 186 SMART SM00987 24 179 2.0E-10 T 05-07-2017 AC028_RS14755 5b9a2b0bbba4e3a1bb8e826074b77899 186 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 22 178 2.1E-41 T 05-07-2017 IPR026353 Hypoxanthine-DNA glycosylase AC028_RS14755 5b9a2b0bbba4e3a1bb8e826074b77899 186 Gene3D G3DSA:3.40.470.10 23 185 2.5E-36 T 05-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AC028_RS14755 5b9a2b0bbba4e3a1bb8e826074b77899 186 SUPERFAMILY SSF52141 23 184 3.14E-38 T 05-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AC028_RS14755 5b9a2b0bbba4e3a1bb8e826074b77899 186 SMART SM00986 24 179 2.0E-10 T 05-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AC028_RS12250 fb7d48cfe04738c1365e980641f61cae 327 Gene3D G3DSA:3.90.550.10 13 128 9.2E-9 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS12250 fb7d48cfe04738c1365e980641f61cae 327 Pfam PF00535 Glycosyl transferase family 2 16 138 1.1E-12 T 05-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AC028_RS12250 fb7d48cfe04738c1365e980641f61cae 327 SUPERFAMILY SSF53448 8 251 1.55E-27 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS00820 718e51efa9f9014cfd165a99b52098e3 407 Pfam PF07494 Two component regulator propeller 135 156 0.0011 T 05-07-2017 IPR011110 Two component regulator propeller AC028_RS00820 718e51efa9f9014cfd165a99b52098e3 407 Pfam PF07494 Two component regulator propeller 181 204 9.4E-4 T 05-07-2017 IPR011110 Two component regulator propeller AC028_RS00820 718e51efa9f9014cfd165a99b52098e3 407 Pfam PF07494 Two component regulator propeller 47 69 3.7E-5 T 05-07-2017 IPR011110 Two component regulator propeller AC028_RS00820 718e51efa9f9014cfd165a99b52098e3 407 Gene3D G3DSA:2.120.10.30 99 288 4.3E-17 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS00820 718e51efa9f9014cfd165a99b52098e3 407 Gene3D G3DSA:2.120.10.30 318 401 2.9E-4 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS00820 718e51efa9f9014cfd165a99b52098e3 407 SUPERFAMILY SSF63829 76 334 5.67E-21 T 05-07-2017 AC028_RS11860 243b78a5ffddc932729421e4c369c067 365 Gene3D G3DSA:2.40.160.20 14 209 1.4E-15 T 05-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AC028_RS11860 243b78a5ffddc932729421e4c369c067 365 Gene3D G3DSA:3.30.1330.60 252 363 3.1E-39 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS11860 243b78a5ffddc932729421e4c369c067 365 SUPERFAMILY SSF103088 253 363 1.18E-35 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS11860 243b78a5ffddc932729421e4c369c067 365 Pfam PF13505 Outer membrane protein beta-barrel domain 7 188 1.9E-20 T 05-07-2017 IPR027385 Outer membrane protein beta-barrel AC028_RS11860 243b78a5ffddc932729421e4c369c067 365 Pfam PF00691 OmpA family 255 346 6.9E-23 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS11860 243b78a5ffddc932729421e4c369c067 365 SUPERFAMILY SSF103647 210 246 4.18E-5 T 05-07-2017 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AC028_RS11860 243b78a5ffddc932729421e4c369c067 365 PRINTS PR01021 OMPA domain signature 301 317 4.8E-18 T 05-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AC028_RS11860 243b78a5ffddc932729421e4c369c067 365 PRINTS PR01021 OMPA domain signature 286 301 4.8E-18 T 05-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AC028_RS11860 243b78a5ffddc932729421e4c369c067 365 PRINTS PR01021 OMPA domain signature 256 278 4.8E-18 T 05-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AC028_RS11860 243b78a5ffddc932729421e4c369c067 365 SUPERFAMILY SSF56925 27 188 2.62E-17 T 05-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AC028_RS04955 2157c9dd9d3cdfaf372b55f9de861fd9 839 Pfam PF00069 Protein kinase domain 93 299 1.3E-35 T 05-07-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AC028_RS04955 2157c9dd9d3cdfaf372b55f9de861fd9 839 Gene3D G3DSA:1.25.40.10 476 799 4.0E-16 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS04955 2157c9dd9d3cdfaf372b55f9de861fd9 839 Pfam PF13374 Tetratricopeptide repeat 691 725 1.2E-6 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS04955 2157c9dd9d3cdfaf372b55f9de861fd9 839 SUPERFAMILY SSF48452 466 580 3.34E-6 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS04955 2157c9dd9d3cdfaf372b55f9de861fd9 839 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 211 223 - T 05-07-2017 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AC028_RS04955 2157c9dd9d3cdfaf372b55f9de861fd9 839 SUPERFAMILY SSF48452 685 799 6.33E-12 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS04955 2157c9dd9d3cdfaf372b55f9de861fd9 839 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 97 122 - T 05-07-2017 IPR017441 Protein kinase, ATP binding site GO:0005524 AC028_RS04955 2157c9dd9d3cdfaf372b55f9de861fd9 839 SMART SM00220 91 368 4.7E-40 T 05-07-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AC028_RS04955 2157c9dd9d3cdfaf372b55f9de861fd9 839 Gene3D G3DSA:3.30.200.20 86 200 7.4E-23 T 05-07-2017 AC028_RS04955 2157c9dd9d3cdfaf372b55f9de861fd9 839 SUPERFAMILY SSF56112 87 378 5.13E-56 T 05-07-2017 IPR011009 Protein kinase-like domain AC028_RS04955 2157c9dd9d3cdfaf372b55f9de861fd9 839 Pfam PF13424 Tetratricopeptide repeat 732 800 5.3E-9 T 05-07-2017 AC028_RS04955 2157c9dd9d3cdfaf372b55f9de861fd9 839 Gene3D G3DSA:1.10.510.10 201 377 4.4E-31 T 05-07-2017 AC028_RS10445 9a7886cc1c3a2d6b334c8ff13f851c38 553 SMART SM00382 348 526 1.5E-10 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS10445 9a7886cc1c3a2d6b334c8ff13f851c38 553 SMART SM00382 31 236 2.7E-8 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS10445 9a7886cc1c3a2d6b334c8ff13f851c38 553 SUPERFAMILY SSF52540 303 522 4.18E-47 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10445 9a7886cc1c3a2d6b334c8ff13f851c38 553 Pfam PF12848 ABC transporter 230 306 2.4E-11 T 05-07-2017 IPR032781 ABC-transporter extension domain AC028_RS10445 9a7886cc1c3a2d6b334c8ff13f851c38 553 Pfam PF00005 ABC transporter 23 191 1.0E-28 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS10445 9a7886cc1c3a2d6b334c8ff13f851c38 553 Pfam PF00005 ABC transporter 340 473 2.1E-23 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS10445 9a7886cc1c3a2d6b334c8ff13f851c38 553 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 552 6.3E-287 T 05-07-2017 IPR022374 ABC transporter, ATP-binding protein, ChvD AC028_RS10445 9a7886cc1c3a2d6b334c8ff13f851c38 553 Gene3D G3DSA:3.40.50.300 8 276 4.5E-51 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10445 9a7886cc1c3a2d6b334c8ff13f851c38 553 Gene3D G3DSA:3.40.50.300 321 535 1.3E-45 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10445 9a7886cc1c3a2d6b334c8ff13f851c38 553 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS10445 9a7886cc1c3a2d6b334c8ff13f851c38 553 SUPERFAMILY SSF52540 9 237 5.42E-48 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06310 d9fe9debb933c61ba82c703db89df171 634 Gene3D G3DSA:3.50.50.60 8 238 3.2E-44 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS06310 d9fe9debb933c61ba82c703db89df171 634 Pfam PF13932 GidA associated domain 409 622 5.5E-69 T 05-07-2017 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 AC028_RS06310 d9fe9debb933c61ba82c703db89df171 634 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 630 41.834 T 05-07-2017 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 AC028_RS06310 d9fe9debb933c61ba82c703db89df171 634 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 279 293 - T 05-07-2017 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AC028_RS06310 d9fe9debb933c61ba82c703db89df171 634 SUPERFAMILY SSF51905 8 69 2.09E-45 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS06310 d9fe9debb933c61ba82c703db89df171 634 SUPERFAMILY SSF51905 100 267 2.09E-45 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS06310 d9fe9debb933c61ba82c703db89df171 634 Pfam PF01134 Glucose inhibited division protein A 9 404 2.4E-162 T 05-07-2017 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 AC028_RS06310 d9fe9debb933c61ba82c703db89df171 634 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 374 397 - T 05-07-2017 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AC028_RS06310 d9fe9debb933c61ba82c703db89df171 634 SMART SM01228 552 623 9.1E-43 T 05-07-2017 AC028_RS06310 d9fe9debb933c61ba82c703db89df171 634 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 627 1.9E-268 T 05-07-2017 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 AC028_RS00180 cd7b3874340e2ed15c393481161d2599 468 SUPERFAMILY SSF53623 117 307 3.92E-41 T 05-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AC028_RS00180 cd7b3874340e2ed15c393481161d2599 468 Pfam PF08245 Mur ligase middle domain 120 290 1.8E-22 T 05-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AC028_RS00180 cd7b3874340e2ed15c393481161d2599 468 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 118 141 - T 05-07-2017 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AC028_RS00180 cd7b3874340e2ed15c393481161d2599 468 Gene3D G3DSA:3.40.1190.10 115 308 2.2E-47 T 05-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AC028_RS00180 cd7b3874340e2ed15c393481161d2599 468 Gene3D G3DSA:3.90.190.20 311 451 1.1E-30 T 05-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AC028_RS00180 cd7b3874340e2ed15c393481161d2599 468 SUPERFAMILY SSF53244 310 452 1.05E-26 T 05-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AC028_RS00180 cd7b3874340e2ed15c393481161d2599 468 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 383 9.6E-7 T 05-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AC028_RS00180 cd7b3874340e2ed15c393481161d2599 468 Gene3D G3DSA:3.40.50.720 5 94 5.3E-6 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS00180 cd7b3874340e2ed15c393481161d2599 468 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 451 3.8E-89 T 05-07-2017 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS00180 cd7b3874340e2ed15c393481161d2599 468 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 9 455 27.662 T 05-07-2017 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS11135 5c8c20adc7bb313a2f07317f601038b2 143 Gene3D G3DSA:3.10.450.50 10 139 6.1E-19 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS11135 5c8c20adc7bb313a2f07317f601038b2 143 Pfam PF13577 SnoaL-like domain 10 132 3.5E-16 T 05-07-2017 IPR009959 Polyketide cyclase SnoaL-like domain AC028_RS11135 5c8c20adc7bb313a2f07317f601038b2 143 SUPERFAMILY SSF54427 6 138 2.06E-23 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS14535 113b14b84dca4f8179f317e7a588cc24 478 SMART SM00986 304 464 6.1E-36 T 05-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AC028_RS14535 113b14b84dca4f8179f317e7a588cc24 478 TIGRFAM TIGR03914 UDG_fam_dom: uracil-DNA glycosylase family domain 238 465 2.9E-98 T 05-07-2017 IPR005273 Uracil-DNA glycosylase, family 4 domain AC028_RS14535 113b14b84dca4f8179f317e7a588cc24 478 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 11 236 2.6E-66 T 05-07-2017 IPR023875 DNA metabolism protein, putative AC028_RS14535 113b14b84dca4f8179f317e7a588cc24 478 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 290 451 2.6E-38 T 05-07-2017 IPR005273 Uracil-DNA glycosylase, family 4 domain AC028_RS14535 113b14b84dca4f8179f317e7a588cc24 478 Gene3D G3DSA:3.40.470.10 279 466 4.0E-63 T 05-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AC028_RS14535 113b14b84dca4f8179f317e7a588cc24 478 SUPERFAMILY SSF52141 278 454 2.78E-53 T 05-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AC028_RS14535 113b14b84dca4f8179f317e7a588cc24 478 SMART SM00987 304 464 6.1E-36 T 05-07-2017 AC028_RS14535 113b14b84dca4f8179f317e7a588cc24 478 Pfam PF03167 Uracil DNA glycosylase superfamily 304 453 2.5E-36 T 05-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AC028_RS14535 113b14b84dca4f8179f317e7a588cc24 478 Pfam PF13566 Domain of unknown function (DUF4130 77 235 3.3E-43 T 05-07-2017 IPR025404 Domain of unknown function DUF4130 AC028_RS04075 6914d2258711acae8d6f076f32b289ad 215 SUPERFAMILY SSF46689 20 79 1.61E-10 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS04075 6914d2258711acae8d6f076f32b289ad 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 71 5.0E-8 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS04075 6914d2258711acae8d6f076f32b289ad 215 Gene3D G3DSA:1.10.357.10 12 207 3.7E-26 T 05-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AC028_RS04265 64210d58b8c01e0e4406f4f8238c6cf7 371 SUPERFAMILY SSF53474 103 342 3.78E-38 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS04265 64210d58b8c01e0e4406f4f8238c6cf7 371 Gene3D G3DSA:3.40.50.1820 103 226 5.8E-43 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS04265 64210d58b8c01e0e4406f4f8238c6cf7 371 Gene3D G3DSA:3.40.50.1820 262 339 5.8E-43 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS04265 64210d58b8c01e0e4406f4f8238c6cf7 371 Pfam PF12697 Alpha/beta hydrolase family 112 322 1.4E-15 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS07795 9e13f4b1baf2df9368717c0bb5085e6e 113 Gene3D G3DSA:3.30.160.100 1 103 1.0E-9 T 05-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AC028_RS07795 9e13f4b1baf2df9368717c0bb5085e6e 113 SUPERFAMILY SSF69754 1 96 2.35E-9 T 05-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AC028_RS07795 9e13f4b1baf2df9368717c0bb5085e6e 113 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 7 101 6.2E-7 T 05-07-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AC028_RS02895 54233d19c512e040e6c672386f1d42ef 294 Gene3D G3DSA:3.40.190.10 177 257 1.9E-21 T 05-07-2017 AC028_RS02895 54233d19c512e040e6c672386f1d42ef 294 Pfam PF03466 LysR substrate binding domain 88 289 6.6E-43 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS02895 54233d19c512e040e6c672386f1d42ef 294 SUPERFAMILY SSF46785 1 110 4.63E-25 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS02895 54233d19c512e040e6c672386f1d42ef 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.0E-21 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS02895 54233d19c512e040e6c672386f1d42ef 294 SUPERFAMILY SSF53850 90 292 3.44E-43 T 05-07-2017 AC028_RS02895 54233d19c512e040e6c672386f1d42ef 294 Gene3D G3DSA:1.10.10.10 1 85 5.1E-29 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS02895 54233d19c512e040e6c672386f1d42ef 294 Gene3D G3DSA:3.40.190.10 91 176 6.6E-15 T 05-07-2017 AC028_RS02895 54233d19c512e040e6c672386f1d42ef 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.5E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS02895 54233d19c512e040e6c672386f1d42ef 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.5E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS02895 54233d19c512e040e6c672386f1d42ef 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.5E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS15320 8049b438f58f1313e84bcd62acd3a299 321 Gene3D G3DSA:3.20.20.330 12 317 5.8E-93 T 05-07-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AC028_RS15320 8049b438f58f1313e84bcd62acd3a299 321 Pfam PF02574 Homocysteine S-methyltransferase 24 317 5.0E-73 T 05-07-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AC028_RS15320 8049b438f58f1313e84bcd62acd3a299 321 SUPERFAMILY SSF82282 18 319 6.93E-82 T 05-07-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AC028_RS17355 b22ef68b96ce6523cce91d1e61a1b491 164 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 16 160 1.7E-48 T 05-07-2017 IPR008136 CinA, C-terminal AC028_RS17355 b22ef68b96ce6523cce91d1e61a1b491 164 Gene3D G3DSA:3.90.950.20 6 162 1.6E-54 T 05-07-2017 IPR008136 CinA, C-terminal AC028_RS17355 b22ef68b96ce6523cce91d1e61a1b491 164 SUPERFAMILY SSF142433 7 162 3.4E-54 T 05-07-2017 IPR008136 CinA, C-terminal AC028_RS17355 b22ef68b96ce6523cce91d1e61a1b491 164 Pfam PF02464 Competence-damaged protein 10 162 2.3E-57 T 05-07-2017 IPR008136 CinA, C-terminal AC028_RS10995 7ad99d25dc815a7c882de3ee247f6999 357 Pfam PF00158 Sigma-54 interaction domain 30 193 3.9E-67 T 05-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AC028_RS10995 7ad99d25dc815a7c882de3ee247f6999 357 SUPERFAMILY SSF46689 240 347 1.08E-7 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS10995 7ad99d25dc815a7c882de3ee247f6999 357 SUPERFAMILY SSF52540 28 268 4.2E-68 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10995 7ad99d25dc815a7c882de3ee247f6999 357 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 51 64 - T 05-07-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AC028_RS10995 7ad99d25dc815a7c882de3ee247f6999 357 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 113 128 - T 05-07-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AC028_RS10995 7ad99d25dc815a7c882de3ee247f6999 357 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 240 249 - T 05-07-2017 IPR025944 Sigma-54 interaction domain, conserved site AC028_RS10995 7ad99d25dc815a7c882de3ee247f6999 357 Gene3D G3DSA:1.10.8.60 200 271 2.2E-22 T 05-07-2017 AC028_RS10995 7ad99d25dc815a7c882de3ee247f6999 357 Gene3D G3DSA:3.40.50.300 28 199 1.6E-54 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10995 7ad99d25dc815a7c882de3ee247f6999 357 SMART SM00382 47 190 1.9E-12 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS10995 7ad99d25dc815a7c882de3ee247f6999 357 Gene3D G3DSA:1.10.10.60 308 348 2.1E-7 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS19710 a6b64d65f8dcc688bf215c97ee85a714 616 Pfam PF02254 TrkA-N domain 406 519 9.2E-21 T 05-07-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AC028_RS19710 a6b64d65f8dcc688bf215c97ee85a714 616 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 18 289 1.8E-78 T 05-07-2017 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AC028_RS19710 a6b64d65f8dcc688bf215c97ee85a714 616 Gene3D G3DSA:3.40.50.720 403 531 2.9E-31 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS19710 a6b64d65f8dcc688bf215c97ee85a714 616 SUPERFAMILY SSF51735 405 533 7.18E-32 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS19710 a6b64d65f8dcc688bf215c97ee85a714 616 Pfam PF00999 Sodium/hydrogen exchanger family 14 378 6.5E-69 T 05-07-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AC028_RS19595 30e028083c34d769389b1557cf0635c3 1030 SUPERFAMILY SSF63829 420 641 6.54E-6 T 05-07-2017 AC028_RS19595 30e028083c34d769389b1557cf0635c3 1030 SMART SM00387 910 1007 8.7E-8 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS19595 30e028083c34d769389b1557cf0635c3 1030 SUPERFAMILY SSF63829 131 319 1.08E-11 T 05-07-2017 AC028_RS19595 30e028083c34d769389b1557cf0635c3 1030 Gene3D G3DSA:3.30.565.10 876 1006 1.3E-7 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS19595 30e028083c34d769389b1557cf0635c3 1030 Pfam PF07730 Histidine kinase 806 870 6.6E-11 T 05-07-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AC028_RS19595 30e028083c34d769389b1557cf0635c3 1030 Pfam PF07495 Y_Y_Y domain 699 759 9.1E-18 T 05-07-2017 IPR011123 Two component regulator three Y AC028_RS19595 30e028083c34d769389b1557cf0635c3 1030 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 913 1005 2.4E-8 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS19595 30e028083c34d769389b1557cf0635c3 1030 SUPERFAMILY SSF55874 872 1005 5.76E-16 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS19595 30e028083c34d769389b1557cf0635c3 1030 Gene3D G3DSA:2.120.10.30 112 302 5.0E-8 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS17210 28cb2c2af3efd65701dbc213fff27cc4 446 Pfam PF03471 Transporter associated domain 358 436 3.7E-20 T 05-07-2017 IPR005170 Transporter-associated domain AC028_RS17210 28cb2c2af3efd65701dbc213fff27cc4 446 SMART SM01091 356 437 1.9E-31 T 05-07-2017 IPR005170 Transporter-associated domain AC028_RS17210 28cb2c2af3efd65701dbc213fff27cc4 446 SUPERFAMILY SSF56176 355 442 3.54E-23 T 05-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AC028_RS17210 28cb2c2af3efd65701dbc213fff27cc4 446 Gene3D G3DSA:3.10.580.10 208 333 5.8E-17 T 05-07-2017 AC028_RS17210 28cb2c2af3efd65701dbc213fff27cc4 446 Gene3D G3DSA:3.30.465.10 334 435 1.4E-28 T 05-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AC028_RS17210 28cb2c2af3efd65701dbc213fff27cc4 446 SUPERFAMILY SSF54631 209 341 1.13E-25 T 05-07-2017 AC028_RS17210 28cb2c2af3efd65701dbc213fff27cc4 446 Pfam PF01595 Domain of unknown function DUF21 5 207 4.6E-47 T 05-07-2017 IPR002550 Domain of unknown function DUF21 AC028_RS17210 28cb2c2af3efd65701dbc213fff27cc4 446 Pfam PF00571 CBS domain 292 340 3.1E-6 T 05-07-2017 IPR000644 CBS domain AC028_RS17210 28cb2c2af3efd65701dbc213fff27cc4 446 SMART SM00116 231 280 21.0 T 05-07-2017 IPR000644 CBS domain AC028_RS17210 28cb2c2af3efd65701dbc213fff27cc4 446 SMART SM00116 292 340 0.88 T 05-07-2017 IPR000644 CBS domain AC028_RS21940 66aa72300bddead979b9cb12740d97ef 86 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 28 56 4.0E-10 T 05-07-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AC028_RS21940 66aa72300bddead979b9cb12740d97ef 86 Gene3D G3DSA:1.10.287.1040 14 80 5.5E-26 T 05-07-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AC028_RS21940 66aa72300bddead979b9cb12740d97ef 86 SUPERFAMILY SSF116842 13 72 1.96E-18 T 05-07-2017 AC028_RS21940 66aa72300bddead979b9cb12740d97ef 86 Pfam PF02609 Exonuclease VII small subunit 15 65 1.8E-19 T 05-07-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AC028_RS21940 66aa72300bddead979b9cb12740d97ef 86 PIRSF PIRSF006488 1 84 3.2E-25 T 05-07-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AC028_RS21940 66aa72300bddead979b9cb12740d97ef 86 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 14 74 15.826 T 05-07-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AC028_RS21940 66aa72300bddead979b9cb12740d97ef 86 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 15 68 2.5E-22 T 05-07-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AC028_RS14515 04e72b032a8d1a265dd3469f9efc6343 298 Pfam PF03466 LysR substrate binding domain 89 292 3.8E-48 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS14515 04e72b032a8d1a265dd3469f9efc6343 298 SUPERFAMILY SSF53850 89 294 6.88E-49 T 05-07-2017 AC028_RS14515 04e72b032a8d1a265dd3469f9efc6343 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.9E-17 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS14515 04e72b032a8d1a265dd3469f9efc6343 298 Gene3D G3DSA:3.40.190.10 177 259 5.9E-9 T 05-07-2017 AC028_RS14515 04e72b032a8d1a265dd3469f9efc6343 298 SUPERFAMILY SSF46785 4 84 4.14E-21 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS14515 04e72b032a8d1a265dd3469f9efc6343 298 Gene3D G3DSA:3.40.190.10 93 176 1.7E-25 T 05-07-2017 AC028_RS14515 04e72b032a8d1a265dd3469f9efc6343 298 Gene3D G3DSA:1.10.10.10 2 82 2.7E-24 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS20455 799a4449f69b148944cbe7e291839301 363 SUPERFAMILY SSF53098 2 192 1.77E-55 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS20455 799a4449f69b148944cbe7e291839301 363 Pfam PF01612 3'-5' exonuclease 3 168 3.3E-29 T 05-07-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AC028_RS20455 799a4449f69b148944cbe7e291839301 363 Gene3D G3DSA:3.30.420.10 5 187 1.8E-16 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS20455 799a4449f69b148944cbe7e291839301 363 Pfam PF00570 HRDC domain 213 258 4.1E-5 T 05-07-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 AC028_RS20455 799a4449f69b148944cbe7e291839301 363 SMART SM00474 2 169 1.8E-31 T 05-07-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AC028_RS20455 799a4449f69b148944cbe7e291839301 363 SUPERFAMILY SSF47819 193 282 5.23E-15 T 05-07-2017 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AC028_RS20455 799a4449f69b148944cbe7e291839301 363 SUPERFAMILY SSF47819 293 360 4.58E-11 T 05-07-2017 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AC028_RS20455 799a4449f69b148944cbe7e291839301 363 TIGRFAM TIGR01388 rnd: ribonuclease D 4 358 1.2E-118 T 05-07-2017 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AC028_RS20455 799a4449f69b148944cbe7e291839301 363 Hamap MF_01899 Ribonuclease D [rnd]. 2 359 36.674 T 05-07-2017 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AC028_RS16075 442265089b6c0c1004bfb3048a0f3b42 300 Gene3D G3DSA:3.40.190.10 94 179 1.2E-21 T 05-07-2017 AC028_RS16075 442265089b6c0c1004bfb3048a0f3b42 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.3E-22 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS16075 442265089b6c0c1004bfb3048a0f3b42 300 Gene3D G3DSA:1.10.10.10 5 88 4.6E-29 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS16075 442265089b6c0c1004bfb3048a0f3b42 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.2E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS16075 442265089b6c0c1004bfb3048a0f3b42 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.2E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS16075 442265089b6c0c1004bfb3048a0f3b42 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.2E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS16075 442265089b6c0c1004bfb3048a0f3b42 300 SUPERFAMILY SSF53850 95 297 5.1E-42 T 05-07-2017 AC028_RS16075 442265089b6c0c1004bfb3048a0f3b42 300 SUPERFAMILY SSF46785 4 115 3.09E-25 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS16075 442265089b6c0c1004bfb3048a0f3b42 300 Pfam PF03466 LysR substrate binding domain 94 294 2.9E-41 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS16075 442265089b6c0c1004bfb3048a0f3b42 300 Gene3D G3DSA:3.40.190.10 180 266 4.6E-19 T 05-07-2017 AC028_RS14885 a8f77b0e4da06a1b0a44ae9b7af09bb9 239 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS14885 a8f77b0e4da06a1b0a44ae9b7af09bb9 239 SMART SM00382 30 217 1.1E-16 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS14885 a8f77b0e4da06a1b0a44ae9b7af09bb9 239 Gene3D G3DSA:3.40.50.300 1 234 1.5E-68 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS14885 a8f77b0e4da06a1b0a44ae9b7af09bb9 239 SUPERFAMILY SSF52540 1 233 1.36E-71 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS14885 a8f77b0e4da06a1b0a44ae9b7af09bb9 239 Pfam PF00005 ABC transporter 21 169 9.6E-30 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS01630 d5f759de0721afce7a59627ee2ace60c 244 Pfam PF02654 Cobalamin-5-phosphate synthase 8 237 1.5E-52 T 05-07-2017 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AC028_RS01630 d5f759de0721afce7a59627ee2ace60c 244 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 1 239 1.5E-36 T 05-07-2017 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AC028_RS01630 d5f759de0721afce7a59627ee2ace60c 244 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 244 48.424 T 05-07-2017 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AC028_RS20120 d04f77c77f57767ccf444451b02f528a 447 PIRSF PIRSF036441 22 447 1.3E-289 T 05-07-2017 IPR011242 Acetylglutamate kinase argB GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AC028_RS20120 d04f77c77f57767ccf444451b02f528a 447 TIGRFAM TIGR00761 argB: acetylglutamate kinase 43 264 2.3E-61 T 05-07-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AC028_RS20120 d04f77c77f57767ccf444451b02f528a 447 SUPERFAMILY SSF55729 305 402 1.46E-5 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS20120 d04f77c77f57767ccf444451b02f528a 447 Gene3D G3DSA:3.40.1160.10 41 292 1.9E-69 T 05-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AC028_RS20120 d04f77c77f57767ccf444451b02f528a 447 Pfam PF00696 Amino acid kinase family 44 259 6.3E-31 T 05-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AC028_RS20120 d04f77c77f57767ccf444451b02f528a 447 SUPERFAMILY SSF53633 16 294 1.27E-53 T 05-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AC028_RS20120 d04f77c77f57767ccf444451b02f528a 447 Pfam PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase 277 439 2.4E-54 T 05-07-2017 IPR006855 Vertebrate-like NAGS Gcn5-related N-acetyltransferase (GNAT) domain KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|Reactome: R-HSA-70635 AC028_RS09165 cd832dea7b0b3ce1adc08e1c43878426 445 Hamap MF_00455 Xylose isomerase [xylA]. 19 443 53.388 T 05-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS09165 cd832dea7b0b3ce1adc08e1c43878426 445 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 12 443 2.9E-211 T 05-07-2017 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS09165 cd832dea7b0b3ce1adc08e1c43878426 445 Gene3D G3DSA:3.20.20.150 10 443 6.8E-193 T 05-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain AC028_RS09165 cd832dea7b0b3ce1adc08e1c43878426 445 PRINTS PR00688 Xylose isomerase signature 188 209 1.8E-78 T 05-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS09165 cd832dea7b0b3ce1adc08e1c43878426 445 PRINTS PR00688 Xylose isomerase signature 141 161 1.8E-78 T 05-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS09165 cd832dea7b0b3ce1adc08e1c43878426 445 PRINTS PR00688 Xylose isomerase signature 341 352 1.8E-78 T 05-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS09165 cd832dea7b0b3ce1adc08e1c43878426 445 PRINTS PR00688 Xylose isomerase signature 237 261 1.8E-78 T 05-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS09165 cd832dea7b0b3ce1adc08e1c43878426 445 PRINTS PR00688 Xylose isomerase signature 215 234 1.8E-78 T 05-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS09165 cd832dea7b0b3ce1adc08e1c43878426 445 PRINTS PR00688 Xylose isomerase signature 279 306 1.8E-78 T 05-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS09165 cd832dea7b0b3ce1adc08e1c43878426 445 PRINTS PR00688 Xylose isomerase signature 308 319 1.8E-78 T 05-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS09165 cd832dea7b0b3ce1adc08e1c43878426 445 PRINTS PR00688 Xylose isomerase signature 100 122 1.8E-78 T 05-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS09165 cd832dea7b0b3ce1adc08e1c43878426 445 PRINTS PR00688 Xylose isomerase signature 164 183 1.8E-78 T 05-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS09165 cd832dea7b0b3ce1adc08e1c43878426 445 SUPERFAMILY SSF51658 11 443 1.62E-161 T 05-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain AC028_RS17560 cd832dea7b0b3ce1adc08e1c43878426 445 Hamap MF_00455 Xylose isomerase [xylA]. 19 443 53.388 T 05-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS17560 cd832dea7b0b3ce1adc08e1c43878426 445 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 12 443 2.9E-211 T 05-07-2017 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS17560 cd832dea7b0b3ce1adc08e1c43878426 445 Gene3D G3DSA:3.20.20.150 10 443 6.8E-193 T 05-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain AC028_RS17560 cd832dea7b0b3ce1adc08e1c43878426 445 PRINTS PR00688 Xylose isomerase signature 188 209 1.8E-78 T 05-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS17560 cd832dea7b0b3ce1adc08e1c43878426 445 PRINTS PR00688 Xylose isomerase signature 141 161 1.8E-78 T 05-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS17560 cd832dea7b0b3ce1adc08e1c43878426 445 PRINTS PR00688 Xylose isomerase signature 341 352 1.8E-78 T 05-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS17560 cd832dea7b0b3ce1adc08e1c43878426 445 PRINTS PR00688 Xylose isomerase signature 237 261 1.8E-78 T 05-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS17560 cd832dea7b0b3ce1adc08e1c43878426 445 PRINTS PR00688 Xylose isomerase signature 215 234 1.8E-78 T 05-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS17560 cd832dea7b0b3ce1adc08e1c43878426 445 PRINTS PR00688 Xylose isomerase signature 279 306 1.8E-78 T 05-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS17560 cd832dea7b0b3ce1adc08e1c43878426 445 PRINTS PR00688 Xylose isomerase signature 308 319 1.8E-78 T 05-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS17560 cd832dea7b0b3ce1adc08e1c43878426 445 PRINTS PR00688 Xylose isomerase signature 100 122 1.8E-78 T 05-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS17560 cd832dea7b0b3ce1adc08e1c43878426 445 PRINTS PR00688 Xylose isomerase signature 164 183 1.8E-78 T 05-07-2017 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 AC028_RS17560 cd832dea7b0b3ce1adc08e1c43878426 445 SUPERFAMILY SSF51658 11 443 1.62E-161 T 05-07-2017 IPR013022 Xylose isomerase-like, TIM barrel domain AC028_RS22400 9fc6f94808a4e268746a5bc57cab0d71 340 Pfam PF00437 Type II/IV secretion system protein 13 323 8.7E-69 T 05-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AC028_RS22400 9fc6f94808a4e268746a5bc57cab0d71 340 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 18 337 1.8E-90 T 05-07-2017 IPR014155 Type IV secretion system protein VirB11 GO:0005737|GO:0006810|GO:0009405 AC028_RS22400 9fc6f94808a4e268746a5bc57cab0d71 340 Gene3D G3DSA:3.30.450.90 10 121 2.6E-27 T 05-07-2017 AC028_RS22400 9fc6f94808a4e268746a5bc57cab0d71 340 SUPERFAMILY SSF52540 5 328 1.4E-35 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS22400 9fc6f94808a4e268746a5bc57cab0d71 340 Gene3D G3DSA:3.40.50.300 161 327 2.2E-39 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS13525 06d0ac2b8f57334b468b60c07a4bdd1f 266 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 264 1.0E-71 T 05-07-2017 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AC028_RS13525 06d0ac2b8f57334b468b60c07a4bdd1f 266 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 05-07-2017 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AC028_RS13525 06d0ac2b8f57334b468b60c07a4bdd1f 266 Gene3D G3DSA:3.60.10.10 1 264 1.5E-90 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS13525 06d0ac2b8f57334b468b60c07a4bdd1f 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 257 1.1E-25 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS13525 06d0ac2b8f57334b468b60c07a4bdd1f 266 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 262 1.5E-64 T 05-07-2017 AC028_RS13525 06d0ac2b8f57334b468b60c07a4bdd1f 266 SUPERFAMILY SSF56219 1 264 5.23E-76 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS05475 d05f9122989dcaa857d484ec9fbf0aab 480 SUPERFAMILY SSF47384 263 328 3.73E-9 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS05475 d05f9122989dcaa857d484ec9fbf0aab 480 SMART SM00388 268 334 6.1E-9 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS05475 d05f9122989dcaa857d484ec9fbf0aab 480 SUPERFAMILY SSF55874 364 476 9.31E-26 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS05475 d05f9122989dcaa857d484ec9fbf0aab 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 268 326 1.6E-9 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS05475 d05f9122989dcaa857d484ec9fbf0aab 480 Gene3D G3DSA:1.10.287.130 263 328 2.2E-8 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS05475 d05f9122989dcaa857d484ec9fbf0aab 480 Gene3D G3DSA:3.30.565.10 366 477 6.3E-25 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS05475 d05f9122989dcaa857d484ec9fbf0aab 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 476 9.8E-11 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS05475 d05f9122989dcaa857d484ec9fbf0aab 480 SMART SM00387 374 479 3.0E-23 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS05475 d05f9122989dcaa857d484ec9fbf0aab 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 9.3E-8 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS05475 d05f9122989dcaa857d484ec9fbf0aab 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 9.3E-8 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS05475 d05f9122989dcaa857d484ec9fbf0aab 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 439 9.3E-8 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS15355 9ed510bbcf62c519cfc23822b0e7cfd1 305 Pfam PF13796 Putative sensor 118 297 2.4E-42 T 05-07-2017 IPR025828 Putative sensor domain AC028_RS18820 fbde302cb3f2df4bb26baa880b6f0fee 212 Gene3D G3DSA:1.25.40.10 78 182 1.6E-8 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS18820 fbde302cb3f2df4bb26baa880b6f0fee 212 Pfam PF09976 Tetratricopeptide repeat-like domain 17 202 2.0E-38 T 05-07-2017 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038 AC028_RS18820 fbde302cb3f2df4bb26baa880b6f0fee 212 SUPERFAMILY SSF48452 94 183 3.04E-9 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 SUPERFAMILY SSF55681 245 528 3.83E-94 T 05-07-2017 AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 SUPERFAMILY SSF55186 65 243 1.18E-63 T 05-07-2017 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 SUPERFAMILY SSF81271 4 63 4.58E-15 T 05-07-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 Gene3D G3DSA:3.10.20.30 3 66 5.5E-23 T 05-07-2017 IPR012675 Beta-grasp domain AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 Gene3D G3DSA:3.30.54.20 132 189 5.5E-18 T 05-07-2017 AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 SUPERFAMILY SSF52954 532 633 1.28E-31 T 05-07-2017 IPR004154 Anticodon-binding AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 323 531 7.0E-40 T 05-07-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 SMART SM00863 172 221 1.6E-20 T 05-07-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 74 633 8.5E-216 T 05-07-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 176 221 1.9E-14 T 05-07-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 466 494 8.0E-51 T 05-07-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 509 522 8.0E-51 T 05-07-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 536 548 8.0E-51 T 05-07-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 331 359 8.0E-51 T 05-07-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 364 387 8.0E-51 T 05-07-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 Gene3D G3DSA:3.40.50.800 533 634 5.2E-35 T 05-07-2017 IPR004154 Anticodon-binding AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 Gene3D G3DSA:3.30.980.10 68 131 2.9E-40 T 05-07-2017 AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 Gene3D G3DSA:3.30.980.10 190 226 2.9E-40 T 05-07-2017 AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 Pfam PF03129 Anticodon binding domain 543 632 2.1E-21 T 05-07-2017 IPR004154 Anticodon-binding AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 Gene3D G3DSA:3.30.930.10 244 532 1.1E-113 T 05-07-2017 AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 68 636 33.661 T 05-07-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AC028_RS21325 66a29a63c9ae8397e1cebb812f26ae05 636 Pfam PF02824 TGS domain 4 63 1.5E-11 T 05-07-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 AC028_RS19615 a36f670ea1c451efd87354040f1d3c29 296 Gene3D G3DSA:3.40.190.10 195 254 1.3E-10 T 05-07-2017 AC028_RS19615 a36f670ea1c451efd87354040f1d3c29 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.7E-23 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS19615 a36f670ea1c451efd87354040f1d3c29 296 Gene3D G3DSA:1.10.10.10 4 87 3.9E-28 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS19615 a36f670ea1c451efd87354040f1d3c29 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.4E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS19615 a36f670ea1c451efd87354040f1d3c29 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.4E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS19615 a36f670ea1c451efd87354040f1d3c29 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.4E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS19615 a36f670ea1c451efd87354040f1d3c29 296 Gene3D G3DSA:3.40.190.10 88 194 1.5E-7 T 05-07-2017 AC028_RS19615 a36f670ea1c451efd87354040f1d3c29 296 Pfam PF03466 LysR substrate binding domain 90 288 4.3E-22 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS19615 a36f670ea1c451efd87354040f1d3c29 296 SUPERFAMILY SSF53850 91 288 7.76E-25 T 05-07-2017 AC028_RS19615 a36f670ea1c451efd87354040f1d3c29 296 SUPERFAMILY SSF46785 3 85 9.58E-25 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS21030 2b386ded9cefd65dbdfa74a2c29a2879 523 Pfam PF00082 Subtilase family 269 467 1.7E-9 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS21030 2b386ded9cefd65dbdfa74a2c29a2879 523 SUPERFAMILY SSF52743 184 520 1.19E-63 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS21030 2b386ded9cefd65dbdfa74a2c29a2879 523 Pfam PF09286 Pro-kumamolisin, activation domain 18 149 8.1E-15 T 05-07-2017 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 AC028_RS21030 2b386ded9cefd65dbdfa74a2c29a2879 523 Gene3D G3DSA:3.40.50.200 186 520 5.1E-92 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS21030 2b386ded9cefd65dbdfa74a2c29a2879 523 SMART SM00944 13 151 2.9E-28 T 05-07-2017 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 AC028_RS21030 2b386ded9cefd65dbdfa74a2c29a2879 523 SUPERFAMILY SSF54897 4 159 1.41E-37 T 05-07-2017 IPR009020 Proteinase propeptide inhibitor AC028_RS21030 2b386ded9cefd65dbdfa74a2c29a2879 523 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 448 458 - T 05-07-2017 IPR023828 Peptidase S8, subtilisin, Ser-active site AC028_RS02955 efe7c0ba96dfcbaad7b553e69e0ca083 356 SUPERFAMILY SSF52540 110 330 5.54E-71 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02955 efe7c0ba96dfcbaad7b553e69e0ca083 356 SMART SM00382 143 327 1.7E-22 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS02955 efe7c0ba96dfcbaad7b553e69e0ca083 356 ProSitePatterns PS00211 ABC transporters family signature. 255 269 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS02955 efe7c0ba96dfcbaad7b553e69e0ca083 356 Gene3D G3DSA:3.40.50.300 115 338 4.6E-73 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02955 efe7c0ba96dfcbaad7b553e69e0ca083 356 SUPERFAMILY SSF90123 3 107 9.81E-11 T 05-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AC028_RS02955 efe7c0ba96dfcbaad7b553e69e0ca083 356 Pfam PF00005 ABC transporter 134 283 1.8E-33 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS02955 efe7c0ba96dfcbaad7b553e69e0ca083 356 Gene3D G3DSA:1.20.1560.10 3 100 8.9E-9 T 05-07-2017 AC028_RS20105 7c01f2a14dc81ed36f0454bd8022ce42 432 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 429 29.378 T 05-07-2017 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AC028_RS20105 7c01f2a14dc81ed36f0454bd8022ce42 432 Gene3D G3DSA:1.10.275.10 21 109 1.2E-24 T 05-07-2017 IPR024083 Fumarase/histidase, N-terminal AC028_RS20105 7c01f2a14dc81ed36f0454bd8022ce42 432 Pfam PF00206 Lyase 34 301 3.4E-44 T 05-07-2017 IPR022761 Fumarate lyase, N-terminal AC028_RS20105 7c01f2a14dc81ed36f0454bd8022ce42 432 SUPERFAMILY SSF48557 25 402 1.73E-84 T 05-07-2017 IPR008948 L-Aspartase-like GO:0003824 AC028_RS20105 7c01f2a14dc81ed36f0454bd8022ce42 432 PRINTS PR00145 Argininosuccinate lyase family signature 104 126 1.4E-30 T 05-07-2017 AC028_RS20105 7c01f2a14dc81ed36f0454bd8022ce42 432 PRINTS PR00145 Argininosuccinate lyase family signature 196 212 1.4E-30 T 05-07-2017 AC028_RS20105 7c01f2a14dc81ed36f0454bd8022ce42 432 PRINTS PR00145 Argininosuccinate lyase family signature 313 332 1.4E-30 T 05-07-2017 AC028_RS20105 7c01f2a14dc81ed36f0454bd8022ce42 432 PRINTS PR00145 Argininosuccinate lyase family signature 145 165 1.4E-30 T 05-07-2017 AC028_RS20105 7c01f2a14dc81ed36f0454bd8022ce42 432 PRINTS PR00145 Argininosuccinate lyase family signature 279 295 1.4E-30 T 05-07-2017 AC028_RS20105 7c01f2a14dc81ed36f0454bd8022ce42 432 ProSitePatterns PS00163 Fumarate lyases signature. 279 288 - T 05-07-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 AC028_RS20105 7c01f2a14dc81ed36f0454bd8022ce42 432 Gene3D G3DSA:1.20.200.10 110 388 1.8E-58 T 05-07-2017 AC028_RS20105 7c01f2a14dc81ed36f0454bd8022ce42 432 PRINTS PR00149 Fumarate lyase superfamily signature 279 295 2.0E-13 T 05-07-2017 IPR000362 Fumarate lyase family AC028_RS20105 7c01f2a14dc81ed36f0454bd8022ce42 432 PRINTS PR00149 Fumarate lyase superfamily signature 150 168 2.0E-13 T 05-07-2017 IPR000362 Fumarate lyase family AC028_RS20105 7c01f2a14dc81ed36f0454bd8022ce42 432 PRINTS PR00149 Fumarate lyase superfamily signature 105 123 2.0E-13 T 05-07-2017 IPR000362 Fumarate lyase family AC028_RS21315 b5aa576b98d1d5e292a5ff9fb685cd9b 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 2.9E-18 T 05-07-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AC028_RS21315 b5aa576b98d1d5e292a5ff9fb685cd9b 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.9E-18 T 05-07-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AC028_RS21315 b5aa576b98d1d5e292a5ff9fb685cd9b 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 2.9E-18 T 05-07-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AC028_RS21315 b5aa576b98d1d5e292a5ff9fb685cd9b 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 9.7E-26 T 05-07-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AC028_RS21315 b5aa576b98d1d5e292a5ff9fb685cd9b 65 Pfam PF01632 Ribosomal protein L35 2 62 9.1E-25 T 05-07-2017 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS21315 b5aa576b98d1d5e292a5ff9fb685cd9b 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 05-07-2017 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS21315 b5aa576b98d1d5e292a5ff9fb685cd9b 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.741 T 05-07-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AC028_RS21315 b5aa576b98d1d5e292a5ff9fb685cd9b 65 SUPERFAMILY SSF143034 2 64 3.4E-23 T 05-07-2017 AC028_RS19980 41641d6a815838342ce1f3f6b9bbaa84 761 Pfam PF00082 Subtilase family 213 546 8.9E-37 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS19980 41641d6a815838342ce1f3f6b9bbaa84 761 PRINTS PR00723 Subtilisin serine protease family (S8) signature 480 496 2.9E-6 T 05-07-2017 IPR015500 Peptidase S8, subtilisin-related AC028_RS19980 41641d6a815838342ce1f3f6b9bbaa84 761 PRINTS PR00723 Subtilisin serine protease family (S8) signature 248 261 2.9E-6 T 05-07-2017 IPR015500 Peptidase S8, subtilisin-related AC028_RS19980 41641d6a815838342ce1f3f6b9bbaa84 761 PRINTS PR00723 Subtilisin serine protease family (S8) signature 209 228 2.9E-6 T 05-07-2017 IPR015500 Peptidase S8, subtilisin-related AC028_RS19980 41641d6a815838342ce1f3f6b9bbaa84 761 SUPERFAMILY SSF52743 193 561 2.23E-36 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS19980 41641d6a815838342ce1f3f6b9bbaa84 761 Gene3D G3DSA:3.40.50.200 212 550 1.3E-23 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS10940 705b6ef95e57644ef4c05b44598828c4 248 SMART SM00448 20 132 3.1E-41 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS10940 705b6ef95e57644ef4c05b44598828c4 248 SUPERFAMILY SSF52172 19 145 1.99E-40 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS10940 705b6ef95e57644ef4c05b44598828c4 248 Pfam PF00486 Transcriptional regulatory protein, C terminal 166 240 2.0E-17 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS10940 705b6ef95e57644ef4c05b44598828c4 248 Pfam PF00072 Response regulator receiver domain 22 132 1.3E-28 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS10940 705b6ef95e57644ef4c05b44598828c4 248 Gene3D G3DSA:1.10.10.10 145 240 2.6E-22 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS10940 705b6ef95e57644ef4c05b44598828c4 248 SUPERFAMILY SSF46894 141 240 1.45E-21 T 05-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AC028_RS10940 705b6ef95e57644ef4c05b44598828c4 248 SMART SM00862 166 240 4.9E-16 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS10940 705b6ef95e57644ef4c05b44598828c4 248 Gene3D G3DSA:3.40.50.2300 11 142 1.1E-40 T 05-07-2017 AC028_RS08115 ac3932b227fa4459ce9495a77eaab75a 264 Gene3D G3DSA:3.60.90.10 39 187 1.8E-47 T 05-07-2017 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 AC028_RS08115 ac3932b227fa4459ce9495a77eaab75a 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 7 262 6.0E-142 T 05-07-2017 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AC028_RS08115 ac3932b227fa4459ce9495a77eaab75a 264 Pfam PF02675 S-adenosylmethionine decarboxylase 42 170 6.9E-31 T 05-07-2017 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AC028_RS08115 ac3932b227fa4459ce9495a77eaab75a 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 154.107 T 05-07-2017 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AC028_RS08115 ac3932b227fa4459ce9495a77eaab75a 264 SUPERFAMILY SSF56276 47 175 1.77E-24 T 05-07-2017 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 AC028_RS08115 ac3932b227fa4459ce9495a77eaab75a 264 PIRSF PIRSF001356 2 264 2.5E-146 T 05-07-2017 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AC028_RS08190 f324c8f2e9f9f155e742d06a93219e62 128 Pfam PF01521 Iron-sulphur cluster biosynthesis 23 123 6.3E-19 T 05-07-2017 IPR000361 FeS cluster biogenesis AC028_RS08190 f324c8f2e9f9f155e742d06a93219e62 128 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 25 128 1.4E-37 T 05-07-2017 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 AC028_RS08190 f324c8f2e9f9f155e742d06a93219e62 128 SUPERFAMILY SSF89360 23 117 1.9E-29 T 05-07-2017 IPR000361 FeS cluster biogenesis AC028_RS08190 f324c8f2e9f9f155e742d06a93219e62 128 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 109 126 - T 05-07-2017 IPR017870 FeS cluster insertion, C-terminal, conserved site AC028_RS08190 f324c8f2e9f9f155e742d06a93219e62 128 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 7 128 35.585 T 05-07-2017 IPR023063 FeS cluster insertion protein ErpA GO:0016226 AC028_RS08190 f324c8f2e9f9f155e742d06a93219e62 128 Gene3D G3DSA:2.60.300.12 21 114 6.0E-31 T 05-07-2017 IPR000361 FeS cluster biogenesis AC028_RS15510 8726c9433ee0e55f4ef3ce493fc6428d 869 Pfam PF08335 GlnD PII-uridylyltransferase 178 316 2.4E-31 T 05-07-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AC028_RS15510 8726c9433ee0e55f4ef3ce493fc6428d 869 SMART SM00471 446 593 8.9E-9 T 05-07-2017 IPR003607 HD/PDEase domain AC028_RS15510 8726c9433ee0e55f4ef3ce493fc6428d 869 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 869 261.668 T 05-07-2017 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AC028_RS15510 8726c9433ee0e55f4ef3ce493fc6428d 869 SUPERFAMILY SSF109604 418 541 1.0E-13 T 05-07-2017 AC028_RS15510 8726c9433ee0e55f4ef3ce493fc6428d 869 Gene3D G3DSA:1.10.3210.10 420 609 6.8E-23 T 05-07-2017 IPR006674 HD domain AC028_RS15510 8726c9433ee0e55f4ef3ce493fc6428d 869 Gene3D G3DSA:3.30.460.10 74 156 4.2E-7 T 05-07-2017 AC028_RS15510 8726c9433ee0e55f4ef3ce493fc6428d 869 Gene3D G3DSA:3.30.70.260 796 858 2.3E-13 T 05-07-2017 AC028_RS15510 8726c9433ee0e55f4ef3ce493fc6428d 869 SUPERFAMILY SSF55021 795 863 9.16E-11 T 05-07-2017 AC028_RS15510 8726c9433ee0e55f4ef3ce493fc6428d 869 SUPERFAMILY SSF81301 22 174 5.45E-17 T 05-07-2017 AC028_RS15510 8726c9433ee0e55f4ef3ce493fc6428d 869 Pfam PF01909 Nucleotidyltransferase domain 73 121 9.1E-5 T 05-07-2017 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AC028_RS15510 8726c9433ee0e55f4ef3ce493fc6428d 869 PIRSF PIRSF006288 7 869 7.7E-290 T 05-07-2017 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AC028_RS15510 8726c9433ee0e55f4ef3ce493fc6428d 869 Pfam PF01966 HD domain 451 570 2.1E-13 T 05-07-2017 IPR006674 HD domain AC028_RS15510 8726c9433ee0e55f4ef3ce493fc6428d 869 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 34 866 2.6E-229 T 05-07-2017 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AC028_RS15510 8726c9433ee0e55f4ef3ce493fc6428d 869 SUPERFAMILY SSF55021 688 757 2.91E-5 T 05-07-2017 AC028_RS15510 8726c9433ee0e55f4ef3ce493fc6428d 869 SUPERFAMILY SSF81593 198 317 3.92E-9 T 05-07-2017 AC028_RS22225 4bc4340b463265b49b16c3e7748ea1f9 180 Gene3D G3DSA:3.40.630.30 16 162 5.0E-17 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS22225 4bc4340b463265b49b16c3e7748ea1f9 180 SUPERFAMILY SSF55729 24 167 3.01E-17 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS22225 4bc4340b463265b49b16c3e7748ea1f9 180 Pfam PF00583 Acetyltransferase (GNAT) family 87 161 9.0E-10 T 05-07-2017 IPR000182 GNAT domain GO:0008080 AC028_RS02570 c3b9efb357af7fa6af83493471c54577 286 Pfam PF03755 YicC-like family, N-terminal region 2 152 2.4E-34 T 05-07-2017 IPR013527 YicC-like, N-terminal AC028_RS02570 c3b9efb357af7fa6af83493471c54577 286 Pfam PF08340 Domain of unknown function (DUF1732) 202 286 4.9E-35 T 05-07-2017 IPR013551 Domain of unknown function DUF1732 AC028_RS02570 c3b9efb357af7fa6af83493471c54577 286 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 286 2.2E-80 T 05-07-2017 IPR005229 Conserved hypothetical protein CHP00255 AC028_RS05235 d79599e10fa3ab011cb6b11cf96e3014 490 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 22 274 5.3E-58 T 05-07-2017 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AC028_RS05235 d79599e10fa3ab011cb6b11cf96e3014 490 SUPERFAMILY SSF53850 22 274 8.6E-55 T 05-07-2017 AC028_RS05235 d79599e10fa3ab011cb6b11cf96e3014 490 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 312 481 2.5E-23 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS05235 d79599e10fa3ab011cb6b11cf96e3014 490 Gene3D G3DSA:3.40.190.10 19 118 9.1E-43 T 05-07-2017 AC028_RS05235 d79599e10fa3ab011cb6b11cf96e3014 490 Gene3D G3DSA:3.40.190.10 224 274 9.1E-43 T 05-07-2017 AC028_RS05235 d79599e10fa3ab011cb6b11cf96e3014 490 Gene3D G3DSA:1.10.3720.10 282 472 3.1E-33 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS05235 d79599e10fa3ab011cb6b11cf96e3014 490 Gene3D G3DSA:3.40.190.120 119 217 2.3E-29 T 05-07-2017 AC028_RS05235 d79599e10fa3ab011cb6b11cf96e3014 490 SUPERFAMILY SSF161098 288 470 1.44E-34 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS09500 a394e67e4320ba96972d77288e19ba32 169 TIGRFAM TIGR02559 HrpB7: type III secretion protein HrpB7 5 159 9.0E-42 T 05-07-2017 IPR013392 Type III secretion protein HrpB7 AC028_RS09500 a394e67e4320ba96972d77288e19ba32 169 Pfam PF09486 Bacterial type III secretion protein (HrpB7) 5 159 2.3E-32 T 05-07-2017 IPR013392 Type III secretion protein HrpB7 AC028_RS18805 a2748006975fead3444bd91cb0bda270 401 Gene3D G3DSA:3.20.20.70 125 357 1.1E-14 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS18805 a2748006975fead3444bd91cb0bda270 401 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 22 379 73.521 T 05-07-2017 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AC028_RS18805 a2748006975fead3444bd91cb0bda270 401 SUPERFAMILY SSF102114 121 351 2.35E-15 T 05-07-2017 AC028_RS18805 a2748006975fead3444bd91cb0bda270 401 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 21 383 8.6E-133 T 05-07-2017 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AC028_RS18805 a2748006975fead3444bd91cb0bda270 401 Pfam PF04055 Radical SAM superfamily 129 300 2.1E-17 T 05-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AC028_RS18805 a2748006975fead3444bd91cb0bda270 401 PIRSF PIRSF006004 17 392 8.5E-147 T 05-07-2017 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AC028_RS12085 ae6a805d58462b88b93c98f722128549 823 Gene3D G3DSA:1.10.8.60 501 599 1.6E-32 T 05-07-2017 AC028_RS12085 ae6a805d58462b88b93c98f722128549 823 SMART SM00464 10 203 2.9E-73 T 05-07-2017 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AC028_RS12085 ae6a805d58462b88b93c98f722128549 823 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 353 489 7.5E-18 T 05-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AC028_RS12085 ae6a805d58462b88b93c98f722128549 823 SUPERFAMILY SSF52540 315 603 7.22E-51 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12085 ae6a805d58462b88b93c98f722128549 823 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 11 200 3.5E-41 T 05-07-2017 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AC028_RS12085 ae6a805d58462b88b93c98f722128549 823 SUPERFAMILY SSF54211 610 785 3.75E-57 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS12085 ae6a805d58462b88b93c98f722128549 823 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 585 787 2.8E-94 T 05-07-2017 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 AC028_RS12085 ae6a805d58462b88b93c98f722128549 823 SMART SM00382 349 495 4.0E-12 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS12085 ae6a805d58462b88b93c98f722128549 823 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 691 699 - T 05-07-2017 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 AC028_RS12085 ae6a805d58462b88b93c98f722128549 823 Gene3D G3DSA:3.30.230.10 605 786 7.9E-73 T 05-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_RS12085 ae6a805d58462b88b93c98f722128549 823 PIRSF PIRSF001174 1 789 0.0 T 05-07-2017 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AC028_RS12085 ae6a805d58462b88b93c98f722128549 823 SUPERFAMILY SSF88697 10 202 4.47E-49 T 05-07-2017 IPR015947 PUA-like domain AC028_RS12085 ae6a805d58462b88b93c98f722128549 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 741 759 2.1E-53 T 05-07-2017 AC028_RS12085 ae6a805d58462b88b93c98f722128549 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 357 376 2.1E-53 T 05-07-2017 AC028_RS12085 ae6a805d58462b88b93c98f722128549 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 610 626 2.1E-53 T 05-07-2017 AC028_RS12085 ae6a805d58462b88b93c98f722128549 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 688 707 2.1E-53 T 05-07-2017 AC028_RS12085 ae6a805d58462b88b93c98f722128549 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 718 737 2.1E-53 T 05-07-2017 AC028_RS12085 ae6a805d58462b88b93c98f722128549 823 TIGRFAM TIGR00763 lon: endopeptidase La 12 786 0.0 T 05-07-2017 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AC028_RS12085 ae6a805d58462b88b93c98f722128549 823 Gene3D G3DSA:3.40.50.300 311 500 3.8E-34 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12085 ae6a805d58462b88b93c98f722128549 823 Hamap MF_01973 Lon protease [lon]. 11 787 72.438 T 05-07-2017 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AC028_RS15385 fa29f8d16e0414b7f5b91e3d34fdeb54 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 5.5E-63 T 05-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AC028_RS15385 fa29f8d16e0414b7f5b91e3d34fdeb54 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 315 4.6E-154 T 05-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AC028_RS15385 fa29f8d16e0414b7f5b91e3d34fdeb54 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 51.207 T 05-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AC028_RS15385 fa29f8d16e0414b7f5b91e3d34fdeb54 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 4.7E-49 T 05-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AC028_RS15385 fa29f8d16e0414b7f5b91e3d34fdeb54 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 4.7E-49 T 05-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AC028_RS15385 fa29f8d16e0414b7f5b91e3d34fdeb54 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 4.7E-49 T 05-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AC028_RS15385 fa29f8d16e0414b7f5b91e3d34fdeb54 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 4.7E-49 T 05-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AC028_RS15385 fa29f8d16e0414b7f5b91e3d34fdeb54 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 4.7E-49 T 05-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AC028_RS15385 fa29f8d16e0414b7f5b91e3d34fdeb54 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 4.7E-49 T 05-07-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AC028_RS15385 fa29f8d16e0414b7f5b91e3d34fdeb54 319 SUPERFAMILY SSF52096 5 316 1.3E-104 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS15385 fa29f8d16e0414b7f5b91e3d34fdeb54 319 Gene3D G3DSA:3.90.226.10 57 272 1.6E-53 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS00625 8e8bdc5b5436cc47252b38bc57f4cff5 223 Pfam PF01764 Lipase (class 3) 94 216 1.1E-9 T 05-07-2017 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 AC028_RS00625 8e8bdc5b5436cc47252b38bc57f4cff5 223 SUPERFAMILY SSF53474 89 219 6.28E-14 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS00625 8e8bdc5b5436cc47252b38bc57f4cff5 223 Gene3D G3DSA:3.40.50.1820 89 217 1.7E-13 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 Gene3D G3DSA:3.30.300.20 282 350 1.4E-27 T 05-07-2017 IPR015946 K homology domain-like, alpha/beta AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 SUPERFAMILY SSF54814 205 282 3.92E-29 T 05-07-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 Gene3D G3DSA:2.40.50.140 133 202 2.7E-24 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 369 418 2.2E-22 T 05-07-2017 IPR010214 Transcription termination factor NusA, C-terminal duplication AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 444 494 4.0E-18 T 05-07-2017 IPR010214 Transcription termination factor NusA, C-terminal duplication AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 SUPERFAMILY SSF50249 135 203 7.8E-19 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 Gene3D G3DSA:3.30.1480.10 1 128 1.4E-42 T 05-07-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 3.4E-126 T 05-07-2017 IPR010213 Transcription termination factor NusA GO:0003723 AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 SUPERFAMILY SSF47794 433 493 2.67E-9 T 05-07-2017 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 Pfam PF13184 NusA-like KH domain 234 301 1.9E-27 T 05-07-2017 IPR025249 KH domain, NusA-like GO:0003723 AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 SUPERFAMILY SSF54814 283 346 8.5E-15 T 05-07-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 Gene3D G3DSA:3.30.300.20 203 281 1.7E-33 T 05-07-2017 IPR015946 K homology domain-like, alpha/beta AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 Gene3D G3DSA:1.10.150.20 433 493 7.5E-15 T 05-07-2017 AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 Gene3D G3DSA:1.10.150.20 360 424 9.5E-21 T 05-07-2017 AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 414 29.494 T 05-07-2017 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 SMART SM00316 137 204 5.5E-8 T 05-07-2017 IPR022967 RNA-binding domain, S1 AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 Pfam PF00575 S1 RNA binding domain 135 199 1.5E-7 T 05-07-2017 IPR003029 S1 domain GO:0003676 AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 SUPERFAMILY SSF47794 360 419 6.44E-16 T 05-07-2017 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 SUPERFAMILY SSF69705 1 130 2.09E-37 T 05-07-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 Pfam PF14520 Helix-hairpin-helix domain 436 492 9.6E-7 T 05-07-2017 AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 SMART SM00322 305 368 0.013 T 05-07-2017 IPR004087 K Homology domain GO:0003676 AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 SMART SM00322 234 297 21.0 T 05-07-2017 IPR004087 K Homology domain GO:0003676 AC028_RS21545 0ab108b613a56acde652e711d7b14f24 503 Pfam PF08529 NusA N-terminal domain 4 128 1.2E-36 T 05-07-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 42 182 2.6E-22 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 12 814 97.527 T 05-07-2017 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 Gene3D G3DSA:3.30.565.10 15 222 1.2E-85 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 ProSitePatterns PS00177 DNA topoisomerase II signature. 432 440 - T 05-07-2017 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 SUPERFAMILY SSF56719 740 805 4.45E-83 T 05-07-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 SUPERFAMILY SSF56719 404 570 4.45E-83 T 05-07-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 Gene3D G3DSA:3.30.230.10 230 402 2.0E-72 T 05-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 PRINTS PR00418 DNA topoisomerase II family signature 515 532 3.2E-70 T 05-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 PRINTS PR00418 DNA topoisomerase II family signature 535 547 3.2E-70 T 05-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 PRINTS PR00418 DNA topoisomerase II family signature 430 444 3.2E-70 T 05-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 PRINTS PR00418 DNA topoisomerase II family signature 80 93 3.2E-70 T 05-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 PRINTS PR00418 DNA topoisomerase II family signature 123 137 3.2E-70 T 05-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 PRINTS PR00418 DNA topoisomerase II family signature 278 291 3.2E-70 T 05-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 PRINTS PR00418 DNA topoisomerase II family signature 45 60 3.2E-70 T 05-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 PRINTS PR00418 DNA topoisomerase II family signature 746 762 3.2E-70 T 05-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 PRINTS PR00418 DNA topoisomerase II family signature 497 513 3.2E-70 T 05-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 SUPERFAMILY SSF54211 231 401 2.28E-56 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 Gene3D G3DSA:3.40.50.670 728 796 1.5E-95 T 05-07-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 Gene3D G3DSA:3.40.50.670 414 560 1.5E-95 T 05-07-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 SMART SM00387 41 185 3.0E-26 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 SUPERFAMILY SSF55874 15 220 2.6E-69 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 Pfam PF00204 DNA gyrase B 231 400 1.6E-57 T 05-07-2017 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 PRINTS PR01159 DNA gyrase subunit B signature 230 252 1.7E-73 T 05-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 PRINTS PR01159 DNA gyrase subunit B signature 370 384 1.7E-73 T 05-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 PRINTS PR01159 DNA gyrase subunit B signature 205 218 1.7E-73 T 05-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 PRINTS PR01159 DNA gyrase subunit B signature 480 489 1.7E-73 T 05-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 PRINTS PR01159 DNA gyrase subunit B signature 767 779 1.7E-73 T 05-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 PRINTS PR01159 DNA gyrase subunit B signature 384 404 1.7E-73 T 05-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 PRINTS PR01159 DNA gyrase subunit B signature 190 205 1.7E-73 T 05-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 PRINTS PR01159 DNA gyrase subunit B signature 15 25 1.7E-73 T 05-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 PRINTS PR01159 DNA gyrase subunit B signature 783 799 1.7E-73 T 05-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 PRINTS PR01159 DNA gyrase subunit B signature 322 338 1.7E-73 T 05-07-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 Pfam PF01751 Toprim domain 429 534 2.7E-17 T 05-07-2017 IPR006171 Toprim domain AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 15 814 2.1E-296 T 05-07-2017 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 SMART SM00433 45 807 1.7E-254 T 05-07-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS07030 e7470fb1228cda58a344e1983a7185f7 814 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 742 803 2.0E-29 T 05-07-2017 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AC028_RS01245 a894caf7be81b0bc2e4ebed1161de828 723 SMART SM00954 244 354 2.5E-67 T 05-07-2017 IPR007685 RelA/SpoT GO:0015969 AC028_RS01245 a894caf7be81b0bc2e4ebed1161de828 723 Pfam PF04607 Region found in RelA / SpoT proteins 244 354 1.6E-37 T 05-07-2017 IPR007685 RelA/SpoT GO:0015969 AC028_RS01245 a894caf7be81b0bc2e4ebed1161de828 723 SUPERFAMILY SSF55021 646 721 3.77E-8 T 05-07-2017 AC028_RS01245 a894caf7be81b0bc2e4ebed1161de828 723 SUPERFAMILY SSF81301 201 373 4.9E-64 T 05-07-2017 AC028_RS01245 a894caf7be81b0bc2e4ebed1161de828 723 Gene3D G3DSA:3.30.460.10 186 334 4.0E-52 T 05-07-2017 AC028_RS01245 a894caf7be81b0bc2e4ebed1161de828 723 Pfam PF13291 ACT domain 644 721 3.3E-18 T 05-07-2017 IPR002912 ACT domain GO:0008152|GO:0016597 AC028_RS01245 a894caf7be81b0bc2e4ebed1161de828 723 Pfam PF13328 HD domain 55 185 7.0E-18 T 05-07-2017 IPR003607 HD/PDEase domain AC028_RS01245 a894caf7be81b0bc2e4ebed1161de828 723 SUPERFAMILY SSF81271 391 455 1.22E-19 T 05-07-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AC028_RS01245 a894caf7be81b0bc2e4ebed1161de828 723 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 60 720 6.8E-163 T 05-07-2017 IPR004811 RelA/SpoT family GO:0015969 AC028_RS01245 a894caf7be81b0bc2e4ebed1161de828 723 Gene3D G3DSA:3.30.70.260 645 720 3.2E-10 T 05-07-2017 AC028_RS01245 a894caf7be81b0bc2e4ebed1161de828 723 SUPERFAMILY SSF109604 45 199 1.35E-22 T 05-07-2017 AC028_RS01245 a894caf7be81b0bc2e4ebed1161de828 723 Gene3D G3DSA:3.10.20.30 396 457 1.9E-22 T 05-07-2017 IPR012675 Beta-grasp domain AC028_RS01245 a894caf7be81b0bc2e4ebed1161de828 723 Pfam PF02824 TGS domain 397 455 1.6E-20 T 05-07-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 AC028_RS21395 3326543581aa0c862bcc9b3186ca5bea 673 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 670 43.096 T 05-07-2017 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AC028_RS21395 3326543581aa0c862bcc9b3186ca5bea 673 Gene3D G3DSA:3.40.50.300 278 338 1.5E-51 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS21395 3326543581aa0c862bcc9b3186ca5bea 673 Gene3D G3DSA:3.40.50.300 388 407 1.5E-51 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS21395 3326543581aa0c862bcc9b3186ca5bea 673 Gene3D G3DSA:3.40.50.300 5 89 1.5E-51 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS21395 3326543581aa0c862bcc9b3186ca5bea 673 SUPERFAMILY SSF52540 3 415 9.4E-133 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS21395 3326543581aa0c862bcc9b3186ca5bea 673 Pfam PF12344 Ultra-violet resistance protein B 552 593 7.5E-23 T 05-07-2017 IPR024759 UvrB, YAD/RRR-motif-containing domain AC028_RS21395 3326543581aa0c862bcc9b3186ca5bea 673 Gene3D G3DSA:3.30.2060.10 161 235 1.2E-8 T 05-07-2017 AC028_RS21395 3326543581aa0c862bcc9b3186ca5bea 673 SMART SM00490 460 546 2.5E-20 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS21395 3326543581aa0c862bcc9b3186ca5bea 673 Pfam PF02151 UvrB/uvrC motif 637 669 5.4E-10 T 05-07-2017 IPR001943 UVR domain GO:0005515 AC028_RS21395 3326543581aa0c862bcc9b3186ca5bea 673 Pfam PF04851 Type III restriction enzyme, res subunit 16 105 2.4E-9 T 05-07-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AC028_RS21395 3326543581aa0c862bcc9b3186ca5bea 673 SMART SM00487 9 426 3.9E-27 T 05-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_RS21395 3326543581aa0c862bcc9b3186ca5bea 673 SUPERFAMILY SSF52540 459 582 1.3E-36 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS21395 3326543581aa0c862bcc9b3186ca5bea 673 SUPERFAMILY SSF52540 37 82 1.3E-36 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS21395 3326543581aa0c862bcc9b3186ca5bea 673 Gene3D G3DSA:4.10.860.10 617 669 8.6E-17 T 05-07-2017 IPR001943 UVR domain GO:0005515 AC028_RS21395 3326543581aa0c862bcc9b3186ca5bea 673 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 668 0.0 T 05-07-2017 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AC028_RS21395 3326543581aa0c862bcc9b3186ca5bea 673 Gene3D G3DSA:3.40.50.300 419 582 1.8E-40 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS21395 3326543581aa0c862bcc9b3186ca5bea 673 SUPERFAMILY SSF46600 623 669 8.76E-12 T 05-07-2017 IPR001943 UVR domain GO:0005515 AC028_RS21395 3326543581aa0c862bcc9b3186ca5bea 673 Pfam PF00271 Helicase conserved C-terminal domain 438 545 5.8E-19 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS12345 063ae586408f3ed0ffbe1711c6e72460 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 7 295 47.979 T 05-07-2017 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AC028_RS12345 063ae586408f3ed0ffbe1711c6e72460 298 SUPERFAMILY SSF51621 8 292 5.83E-98 T 05-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AC028_RS12345 063ae586408f3ed0ffbe1711c6e72460 298 ProSitePatterns PS00161 Isocitrate lyase signature. 124 129 - T 05-07-2017 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 AC028_RS12345 063ae586408f3ed0ffbe1711c6e72460 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 13 257 2.8E-48 T 05-07-2017 AC028_RS12345 063ae586408f3ed0ffbe1711c6e72460 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 10 294 1.6E-123 T 05-07-2017 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AC028_RS12345 063ae586408f3ed0ffbe1711c6e72460 298 Gene3D G3DSA:3.20.20.60 10 289 5.5E-96 T 05-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AC028_RS12435 da9ab9f6ea761fd4aa8e42970cada603 375 PRINTS PR00721 Stomatin signature 153 170 1.4E-10 T 05-07-2017 IPR001972 Stomatin family GO:0016020 AC028_RS12435 da9ab9f6ea761fd4aa8e42970cada603 375 PRINTS PR00721 Stomatin signature 199 217 1.4E-10 T 05-07-2017 IPR001972 Stomatin family GO:0016020 AC028_RS12435 da9ab9f6ea761fd4aa8e42970cada603 375 PRINTS PR00721 Stomatin signature 118 139 1.4E-10 T 05-07-2017 IPR001972 Stomatin family GO:0016020 AC028_RS12435 da9ab9f6ea761fd4aa8e42970cada603 375 PRINTS PR00721 Stomatin signature 70 92 1.4E-10 T 05-07-2017 IPR001972 Stomatin family GO:0016020 AC028_RS12435 da9ab9f6ea761fd4aa8e42970cada603 375 SMART SM00244 63 223 1.1E-34 T 05-07-2017 IPR001107 Band 7 domain AC028_RS12435 da9ab9f6ea761fd4aa8e42970cada603 375 Pfam PF01145 SPFH domain / Band 7 family 68 239 1.0E-31 T 05-07-2017 IPR001107 Band 7 domain AC028_RS12435 da9ab9f6ea761fd4aa8e42970cada603 375 TIGRFAM TIGR01933 hflK: HflK protein 65 321 8.6E-100 T 05-07-2017 IPR010201 HflK GO:0016021 AC028_RS12435 da9ab9f6ea761fd4aa8e42970cada603 375 SUPERFAMILY SSF117892 96 230 4.32E-20 T 05-07-2017 IPR001107 Band 7 domain AC028_RS11730 0dacc20df937a2d529e099010a9daee5 63 Pfam PF00327 Ribosomal protein L30p/L7e 10 59 1.4E-12 T 05-07-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AC028_RS11730 0dacc20df937a2d529e099010a9daee5 63 Gene3D G3DSA:3.30.1390.20 7 63 2.8E-23 T 05-07-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AC028_RS11730 0dacc20df937a2d529e099010a9daee5 63 SUPERFAMILY SSF55129 7 63 7.06E-17 T 05-07-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AC028_RS11730 0dacc20df937a2d529e099010a9daee5 63 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 9 63 5.2E-19 T 05-07-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 AC028_RS11730 0dacc20df937a2d529e099010a9daee5 63 PIRSF PIRSF002211 1 63 6.5E-24 T 05-07-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 AC028_RS11730 0dacc20df937a2d529e099010a9daee5 63 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 6 63 18.681 T 05-07-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 AC028_RS17120 b32c442d722f6cc34e10acb48b716d1a 374 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 20 366 2.8E-114 T 05-07-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AC028_RS17120 b32c442d722f6cc34e10acb48b716d1a 374 Gene3D G3DSA:3.90.1150.10 254 371 6.2E-36 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS17120 b32c442d722f6cc34e10acb48b716d1a 374 Gene3D G3DSA:3.40.640.10 19 251 1.2E-76 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS17120 b32c442d722f6cc34e10acb48b716d1a 374 SUPERFAMILY SSF53383 19 370 1.22E-98 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS17120 b32c442d722f6cc34e10acb48b716d1a 374 PIRSF PIRSF000390 8 373 6.1E-98 T 05-07-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 PRINTS PR00107 Phosphocarrier protein signature 173 189 1.7E-14 T 05-07-2017 IPR000032 Phosphocarrier protein HPr-like AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 PRINTS PR00107 Phosphocarrier protein signature 198 213 1.7E-14 T 05-07-2017 IPR000032 Phosphocarrier protein HPr-like AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 PRINTS PR00107 Phosphocarrier protein signature 213 230 1.7E-14 T 05-07-2017 IPR000032 Phosphocarrier protein HPr-like AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 Pfam PF00391 PEP-utilising enzyme, mobile domain 424 496 4.5E-20 T 05-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 275 830 1.4E-145 T 05-07-2017 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 455 466 - T 05-07-2017 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 Pfam PF00381 PTS HPr component phosphorylation site 165 241 7.2E-20 T 05-07-2017 IPR000032 Phosphocarrier protein HPr-like AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 199 214 - T 05-07-2017 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 713 731 - T 05-07-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 144 5.6E-27 T 05-07-2017 IPR002178 PTS EIIA type-2 domain AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 Gene3D G3DSA:1.10.274.10 311 401 1.3E-26 T 05-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 SUPERFAMILY SSF51621 524 815 2.43E-99 T 05-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 SUPERFAMILY SSF47831 311 410 6.67E-23 T 05-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 SUPERFAMILY SSF55804 10 145 4.19E-32 T 05-07-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 Gene3D G3DSA:3.40.930.10 10 146 5.3E-32 T 05-07-2017 IPR002178 PTS EIIA type-2 domain AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 Gene3D G3DSA:3.50.30.10 402 523 1.8E-34 T 05-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 522 806 6.4E-107 T 05-07-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 173 180 - T 05-07-2017 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 SUPERFAMILY SSF55594 164 242 7.98E-21 T 05-07-2017 IPR000032 Phosphocarrier protein HPr-like AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 Pfam PF05524 PEP-utilising enzyme, N-terminal 277 395 1.2E-19 T 05-07-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 564 583 5.0E-21 T 05-07-2017 AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 713 728 5.0E-21 T 05-07-2017 AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 766 778 5.0E-21 T 05-07-2017 AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 730 745 5.0E-21 T 05-07-2017 AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 164 241 1.1E-18 T 05-07-2017 IPR000032 Phosphocarrier protein HPr-like AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 Gene3D G3DSA:3.30.1340.10 164 242 3.1E-24 T 05-07-2017 IPR000032 Phosphocarrier protein HPr-like AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 SUPERFAMILY SSF52009 395 516 3.27E-28 T 05-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 Gene3D G3DSA:3.20.20.60 526 832 2.8E-103 T 05-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AC028_RS20820 d4cc013476016852ed4e349429f768c2 838 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 05-07-2017 IPR002178 PTS EIIA type-2 domain AC028_RS04850 6cab9414ee1311bde13f889d452dcb0c 299 PRINTS PR00073 Coprogen oxidase signature 160 189 3.4E-82 T 05-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AC028_RS04850 6cab9414ee1311bde13f889d452dcb0c 299 PRINTS PR00073 Coprogen oxidase signature 29 45 3.4E-82 T 05-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AC028_RS04850 6cab9414ee1311bde13f889d452dcb0c 299 PRINTS PR00073 Coprogen oxidase signature 88 112 3.4E-82 T 05-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AC028_RS04850 6cab9414ee1311bde13f889d452dcb0c 299 PRINTS PR00073 Coprogen oxidase signature 259 285 3.4E-82 T 05-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AC028_RS04850 6cab9414ee1311bde13f889d452dcb0c 299 PRINTS PR00073 Coprogen oxidase signature 123 145 3.4E-82 T 05-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AC028_RS04850 6cab9414ee1311bde13f889d452dcb0c 299 PRINTS PR00073 Coprogen oxidase signature 231 258 3.4E-82 T 05-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AC028_RS04850 6cab9414ee1311bde13f889d452dcb0c 299 PRINTS PR00073 Coprogen oxidase signature 46 67 3.4E-82 T 05-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AC028_RS04850 6cab9414ee1311bde13f889d452dcb0c 299 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 164 188 - T 05-07-2017 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AC028_RS04850 6cab9414ee1311bde13f889d452dcb0c 299 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 1 274 56.769 T 05-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AC028_RS04850 6cab9414ee1311bde13f889d452dcb0c 299 SUPERFAMILY SSF102886 7 297 9.68E-130 T 05-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AC028_RS04850 6cab9414ee1311bde13f889d452dcb0c 299 Pfam PF01218 Coproporphyrinogen III oxidase 7 298 8.9E-129 T 05-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AC028_RS04850 6cab9414ee1311bde13f889d452dcb0c 299 PIRSF PIRSF000166 2 299 6.8E-121 T 05-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AC028_RS04850 6cab9414ee1311bde13f889d452dcb0c 299 Gene3D G3DSA:3.40.1500.10 5 298 3.4E-127 T 05-07-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AC028_RS21280 bfe818cbe3751f14940a75f5a485bc52 213 Gene3D G3DSA:3.10.560.10 97 192 1.4E-16 T 05-07-2017 AC028_RS21280 bfe818cbe3751f14940a75f5a485bc52 213 Gene3D G3DSA:3.30.1950.10 35 96 5.4E-16 T 05-07-2017 AC028_RS21280 bfe818cbe3751f14940a75f5a485bc52 213 Pfam PF10531 SLBB domain 108 160 7.2E-9 T 05-07-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21280 bfe818cbe3751f14940a75f5a485bc52 213 Pfam PF02563 Polysaccharide biosynthesis/export protein 26 101 7.6E-20 T 05-07-2017 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AC028_RS20880 6558b2a8bde8f6968aa47bfffff5a608 143 SUPERFAMILY SSF54909 65 142 1.88E-14 T 05-07-2017 IPR011008 Dimeric alpha-beta barrel AC028_RS20880 6558b2a8bde8f6968aa47bfffff5a608 143 SUPERFAMILY SSF46785 5 56 2.86E-12 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS20880 6558b2a8bde8f6968aa47bfffff5a608 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 9.6E-14 T 05-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AC028_RS20880 6558b2a8bde8f6968aa47bfffff5a608 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 9.6E-14 T 05-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AC028_RS20880 6558b2a8bde8f6968aa47bfffff5a608 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 9.6E-14 T 05-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AC028_RS20880 6558b2a8bde8f6968aa47bfffff5a608 143 Pfam PF01037 Lrp/AsnC ligand binding domain 69 139 1.9E-13 T 05-07-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AC028_RS20880 6558b2a8bde8f6968aa47bfffff5a608 143 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 49 1.1E-14 T 05-07-2017 AC028_RS20880 6558b2a8bde8f6968aa47bfffff5a608 143 Gene3D G3DSA:1.10.10.10 2 79 9.4E-21 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS20880 6558b2a8bde8f6968aa47bfffff5a608 143 Gene3D G3DSA:3.30.70.920 80 139 1.2E-15 T 05-07-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AC028_RS20880 6558b2a8bde8f6968aa47bfffff5a608 143 SMART SM00344 7 109 8.4E-21 T 05-07-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AC028_RS20880 6558b2a8bde8f6968aa47bfffff5a608 143 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 05-07-2017 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AC028_RS14225 bc444bde98ae4757720151bed75581ce 289 PIRSF PIRSF020481 12 289 2.5E-110 T 05-07-2017 IPR014507 Baseplate assembly protein J, predicted AC028_RS14225 bc444bde98ae4757720151bed75581ce 289 Pfam PF04865 Baseplate J-like protein 106 248 3.4E-26 T 05-07-2017 IPR006949 Baseplate protein J-like AC028_RS12520 060465b982cb4cf1fcd8c5c8ae135c90 536 Pfam PF12161 HsdM N-terminal domain 35 150 8.9E-27 T 05-07-2017 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AC028_RS12520 060465b982cb4cf1fcd8c5c8ae135c90 536 SUPERFAMILY SSF53335 33 535 3.91E-137 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS12520 060465b982cb4cf1fcd8c5c8ae135c90 536 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 293 305 8.6E-20 T 05-07-2017 AC028_RS12520 060465b982cb4cf1fcd8c5c8ae135c90 536 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 219 233 8.6E-20 T 05-07-2017 AC028_RS12520 060465b982cb4cf1fcd8c5c8ae135c90 536 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 196 212 8.6E-20 T 05-07-2017 AC028_RS12520 060465b982cb4cf1fcd8c5c8ae135c90 536 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 327 351 8.6E-20 T 05-07-2017 AC028_RS12520 060465b982cb4cf1fcd8c5c8ae135c90 536 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 296 302 - T 05-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AC028_RS12520 060465b982cb4cf1fcd8c5c8ae135c90 536 Gene3D G3DSA:3.40.50.150 173 384 4.0E-34 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS12520 060465b982cb4cf1fcd8c5c8ae135c90 536 Pfam PF02384 N-6 DNA Methylase 172 498 2.3E-109 T 05-07-2017 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AC028_RS18030 cbe33b53a2844b09029b62c611b64c4b 289 Pfam PF00378 Enoyl-CoA hydratase/isomerase 73 235 5.3E-20 T 05-07-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AC028_RS18030 cbe33b53a2844b09029b62c611b64c4b 289 Gene3D G3DSA:3.90.226.10 73 261 2.6E-33 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS18030 cbe33b53a2844b09029b62c611b64c4b 289 SUPERFAMILY SSF52096 24 265 1.53E-35 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS16235 daa54b7ce687ae61a714462958e67d7c 562 SUPERFAMILY SSF90123 14 325 2.49E-32 T 05-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AC028_RS16235 daa54b7ce687ae61a714462958e67d7c 562 Gene3D G3DSA:3.40.50.300 374 527 7.0E-12 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS16235 daa54b7ce687ae61a714462958e67d7c 562 SUPERFAMILY SSF52540 374 530 2.24E-16 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS16235 daa54b7ce687ae61a714462958e67d7c 562 Gene3D G3DSA:1.20.1560.10 14 317 3.1E-28 T 05-07-2017 AC028_RS21180 7ef591a8c7732aa35f20cbb66930ff16 638 Pfam PF02779 Transketolase, pyrimidine binding domain 321 481 4.9E-36 T 05-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain AC028_RS21180 7ef591a8c7732aa35f20cbb66930ff16 638 Gene3D G3DSA:3.40.50.970 25 202 2.4E-70 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS21180 7ef591a8c7732aa35f20cbb66930ff16 638 Gene3D G3DSA:3.40.50.970 245 336 2.4E-70 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS21180 7ef591a8c7732aa35f20cbb66930ff16 638 SUPERFAMILY SSF52518 246 384 9.83E-73 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS21180 7ef591a8c7732aa35f20cbb66930ff16 638 SUPERFAMILY SSF52518 7 202 9.83E-73 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS21180 7ef591a8c7732aa35f20cbb66930ff16 638 ProSitePatterns PS00802 Transketolase signature 2. 428 444 - T 05-07-2017 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AC028_RS21180 7ef591a8c7732aa35f20cbb66930ff16 638 SUPERFAMILY SSF52922 494 620 1.44E-27 T 05-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AC028_RS21180 7ef591a8c7732aa35f20cbb66930ff16 638 SUPERFAMILY SSF52518 320 507 6.93E-55 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS21180 7ef591a8c7732aa35f20cbb66930ff16 638 Gene3D G3DSA:3.40.50.970 337 498 1.3E-34 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS21180 7ef591a8c7732aa35f20cbb66930ff16 638 ProSitePatterns PS00801 Transketolase signature 1. 35 54 - T 05-07-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AC028_RS21180 7ef591a8c7732aa35f20cbb66930ff16 638 Pfam PF02780 Transketolase, C-terminal domain 498 614 5.5E-23 T 05-07-2017 IPR033248 Transketolase, C-terminal domain AC028_RS21180 7ef591a8c7732aa35f20cbb66930ff16 638 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 9 623 45.05 T 05-07-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AC028_RS21180 7ef591a8c7732aa35f20cbb66930ff16 638 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 10 620 3.6E-256 T 05-07-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AC028_RS21180 7ef591a8c7732aa35f20cbb66930ff16 638 SMART SM00861 322 486 3.2E-58 T 05-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain AC028_RS21180 7ef591a8c7732aa35f20cbb66930ff16 638 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 10 285 9.3E-115 T 05-07-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AC028_RS21180 7ef591a8c7732aa35f20cbb66930ff16 638 Gene3D G3DSA:3.40.50.920 499 620 1.0E-29 T 05-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AC028_RS17690 d71305ffc386309d348718849af25e85 427 Gene3D G3DSA:1.20.1250.20 243 420 5.5E-15 T 05-07-2017 AC028_RS17690 d71305ffc386309d348718849af25e85 427 Gene3D G3DSA:1.20.1250.20 18 217 5.2E-19 T 05-07-2017 AC028_RS17690 d71305ffc386309d348718849af25e85 427 Pfam PF07690 Major Facilitator Superfamily 54 284 1.3E-18 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS17690 d71305ffc386309d348718849af25e85 427 SUPERFAMILY SSF103473 5 426 1.31E-55 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS07200 df782b7dd03d32a28322e9dd6cb6bed2 624 Pfam PF09286 Pro-kumamolisin, activation domain 47 169 4.2E-18 T 05-07-2017 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 AC028_RS07200 df782b7dd03d32a28322e9dd6cb6bed2 624 SUPERFAMILY SSF54897 46 173 2.04E-21 T 05-07-2017 IPR009020 Proteinase propeptide inhibitor AC028_RS07200 df782b7dd03d32a28322e9dd6cb6bed2 624 Gene3D G3DSA:3.40.50.200 199 612 6.6E-61 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS07200 df782b7dd03d32a28322e9dd6cb6bed2 624 Pfam PF00082 Subtilase family 298 550 1.0E-4 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS07200 df782b7dd03d32a28322e9dd6cb6bed2 624 SMART SM00944 36 172 2.2E-34 T 05-07-2017 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 AC028_RS07200 df782b7dd03d32a28322e9dd6cb6bed2 624 SUPERFAMILY SSF52743 207 607 1.31E-44 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS01300 1af89a2e0fec70be396bfc01bfd0ca86 1371 SMART SM00487 75 259 1.6E-27 T 05-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_RS01300 1af89a2e0fec70be396bfc01bfd0ca86 1371 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 46 621 1.9E-269 T 05-07-2017 IPR010222 RNA helicase HrpA GO:0004004 AC028_RS01300 1af89a2e0fec70be396bfc01bfd0ca86 1371 SMART SM00490 314 414 6.7E-14 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS01300 1af89a2e0fec70be396bfc01bfd0ca86 1371 Pfam PF04408 Helicase associated domain (HA2) 477 543 5.0E-17 T 05-07-2017 IPR007502 Helicase-associated domain GO:0004386 AC028_RS01300 1af89a2e0fec70be396bfc01bfd0ca86 1371 SMART SM00382 92 380 3.0E-5 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS01300 1af89a2e0fec70be396bfc01bfd0ca86 1371 Pfam PF00270 DEAD/DEAH box helicase 84 233 1.8E-6 T 05-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AC028_RS01300 1af89a2e0fec70be396bfc01bfd0ca86 1371 Gene3D G3DSA:3.40.50.300 285 426 1.5E-9 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01300 1af89a2e0fec70be396bfc01bfd0ca86 1371 SUPERFAMILY SSF52540 77 612 9.16E-101 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01300 1af89a2e0fec70be396bfc01bfd0ca86 1371 Pfam PF11898 Domain of unknown function (DUF3418) 791 1367 1.7E-175 T 05-07-2017 IPR024590 RNA helicase HrpA, C-terminal AC028_RS01300 1af89a2e0fec70be396bfc01bfd0ca86 1371 Gene3D G3DSA:3.40.50.300 76 234 2.4E-48 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01300 1af89a2e0fec70be396bfc01bfd0ca86 1371 SMART SM00847 474 564 1.3E-33 T 05-07-2017 IPR007502 Helicase-associated domain GO:0004386 AC028_RS01300 1af89a2e0fec70be396bfc01bfd0ca86 1371 Pfam PF00271 Helicase conserved C-terminal domain 292 413 1.5E-9 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS01300 1af89a2e0fec70be396bfc01bfd0ca86 1371 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 680 776 5.4E-21 T 05-07-2017 IPR011709 Domain of unknown function DUF1605 AC028_RS01445 430af96dfdb9dec366175206c539dbe6 174 Gene3D G3DSA:3.30.420.10 3 156 1.5E-53 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS01445 430af96dfdb9dec366175206c539dbe6 174 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 152 3.3E-46 T 05-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AC028_RS01445 430af96dfdb9dec366175206c539dbe6 174 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 156 1.3E-48 T 05-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AC028_RS01445 430af96dfdb9dec366175206c539dbe6 174 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 115 149 - T 05-07-2017 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 AC028_RS01445 430af96dfdb9dec366175206c539dbe6 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.9E-34 T 05-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AC028_RS01445 430af96dfdb9dec366175206c539dbe6 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 140 152 1.9E-34 T 05-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AC028_RS01445 430af96dfdb9dec366175206c539dbe6 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 109 128 1.9E-34 T 05-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AC028_RS01445 430af96dfdb9dec366175206c539dbe6 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 63 79 1.9E-34 T 05-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AC028_RS01445 430af96dfdb9dec366175206c539dbe6 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 85 101 1.9E-34 T 05-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AC028_RS01445 430af96dfdb9dec366175206c539dbe6 174 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 155 44.661 T 05-07-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AC028_RS01445 430af96dfdb9dec366175206c539dbe6 174 SUPERFAMILY SSF53098 3 156 2.78E-46 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS05250 436023c206e2fa44effd59245088a6cb 328 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 200 322 1.7E-39 T 05-07-2017 IPR019257 Histidine-specific methyltransferase, SAM-dependent AC028_RS05250 436023c206e2fa44effd59245088a6cb 328 Gene3D G3DSA:3.40.50.150 82 160 6.4E-4 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS05250 436023c206e2fa44effd59245088a6cb 328 SUPERFAMILY SSF53335 290 320 1.69E-9 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS05250 436023c206e2fa44effd59245088a6cb 328 SUPERFAMILY SSF53335 23 247 1.69E-9 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS05250 436023c206e2fa44effd59245088a6cb 328 PIRSF PIRSF018005 1 328 9.0E-138 T 05-07-2017 IPR017804 Methyltransferase EgtD-like AC028_RS05250 436023c206e2fa44effd59245088a6cb 328 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 25 324 5.7E-117 T 05-07-2017 IPR017804 Methyltransferase EgtD-like AC028_RS06935 d2416d913d566111bf0f85bdff4a6b9e 436 Gene3D G3DSA:1.20.1250.20 19 223 4.0E-44 T 05-07-2017 AC028_RS06935 d2416d913d566111bf0f85bdff4a6b9e 436 SUPERFAMILY SSF103473 17 431 8.76E-83 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS06935 d2416d913d566111bf0f85bdff4a6b9e 436 Pfam PF07690 Major Facilitator Superfamily 29 279 2.8E-36 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS06935 d2416d913d566111bf0f85bdff4a6b9e 436 Pfam PF07690 Major Facilitator Superfamily 285 428 2.0E-9 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS06935 d2416d913d566111bf0f85bdff4a6b9e 436 Gene3D G3DSA:1.20.1250.20 247 429 1.1E-24 T 05-07-2017 AC028_RS12525 f23b5c948f0bbd9b04f1d03bae43e048 144 SUPERFAMILY SSF81593 13 139 1.37E-36 T 05-07-2017 AC028_RS12525 f23b5c948f0bbd9b04f1d03bae43e048 144 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 17 140 1.4E-30 T 05-07-2017 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 AC028_RS12525 f23b5c948f0bbd9b04f1d03bae43e048 144 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 7 140 3.1E-38 T 05-07-2017 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 AC028_RS12525 f23b5c948f0bbd9b04f1d03bae43e048 144 Gene3D G3DSA:1.20.120.330 5 143 2.3E-41 T 05-07-2017 AC028_RS05105 b5167ae7886c26e2d865224e257e1141 164 SUPERFAMILY SSF56300 16 161 6.33E-36 T 05-07-2017 IPR029052 Metallo-dependent phosphatase-like AC028_RS05105 b5167ae7886c26e2d865224e257e1141 164 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 16 147 1.6E-30 T 05-07-2017 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 AC028_RS05105 b5167ae7886c26e2d865224e257e1141 164 Gene3D G3DSA:3.60.21.10 16 152 7.1E-31 T 05-07-2017 IPR029052 Metallo-dependent phosphatase-like AC028_RS05105 b5167ae7886c26e2d865224e257e1141 164 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 16 145 3.7E-22 T 05-07-2017 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 AC028_RS05105 b5167ae7886c26e2d865224e257e1141 164 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 107 131 - T 05-07-2017 IPR020935 Phosphodiesterase YfcE, conserved site AC028_RS09440 35f43b6946bdcc41d5ee00d48f75d743 86 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.0E-16 T 05-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AC028_RS09440 35f43b6946bdcc41d5ee00d48f75d743 86 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.0E-16 T 05-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AC028_RS09440 35f43b6946bdcc41d5ee00d48f75d743 86 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.0E-16 T 05-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AC028_RS09440 35f43b6946bdcc41d5ee00d48f75d743 86 Pfam PF01313 Bacterial export proteins, family 3 6 76 2.7E-19 T 05-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AC028_RS09440 35f43b6946bdcc41d5ee00d48f75d743 86 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 83 1.7E-26 T 05-07-2017 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 AC028_RS01440 cd55db0ea27aed382000ecc6b1f8b887 194 Gene3D G3DSA:1.10.150.20 68 136 8.9E-29 T 05-07-2017 AC028_RS01440 cd55db0ea27aed382000ecc6b1f8b887 194 Gene3D G3DSA:1.10.8.10 148 190 4.3E-13 T 05-07-2017 AC028_RS01440 cd55db0ea27aed382000ecc6b1f8b887 194 SUPERFAMILY SSF46929 147 191 1.57E-7 T 05-07-2017 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AC028_RS01440 cd55db0ea27aed382000ecc6b1f8b887 194 Pfam PF07499 RuvA, C-terminal domain 148 191 4.0E-8 T 05-07-2017 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AC028_RS01440 cd55db0ea27aed382000ecc6b1f8b887 194 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 193 30.038 T 05-07-2017 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AC028_RS01440 cd55db0ea27aed382000ecc6b1f8b887 194 Gene3D G3DSA:2.40.50.140 1 64 2.0E-25 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS01440 cd55db0ea27aed382000ecc6b1f8b887 194 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 193 1.9E-48 T 05-07-2017 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AC028_RS01440 cd55db0ea27aed382000ecc6b1f8b887 194 Pfam PF01330 RuvA N terminal domain 1 62 2.1E-19 T 05-07-2017 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AC028_RS01440 cd55db0ea27aed382000ecc6b1f8b887 194 Pfam PF14520 Helix-hairpin-helix domain 72 130 1.4E-17 T 05-07-2017 AC028_RS01440 cd55db0ea27aed382000ecc6b1f8b887 194 SMART SM00278 108 127 0.089 T 05-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AC028_RS01440 cd55db0ea27aed382000ecc6b1f8b887 194 SMART SM00278 73 92 8.8 T 05-07-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AC028_RS01440 cd55db0ea27aed382000ecc6b1f8b887 194 SUPERFAMILY SSF47781 66 134 1.33E-20 T 05-07-2017 IPR010994 RuvA domain 2-like AC028_RS01440 cd55db0ea27aed382000ecc6b1f8b887 194 SUPERFAMILY SSF50249 1 63 1.48E-17 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS16780 b00e2a717d36562f5dd728bd239855ab 112 SUPERFAMILY SSF89360 1 96 8.83E-27 T 05-07-2017 IPR000361 FeS cluster biogenesis AC028_RS16780 b00e2a717d36562f5dd728bd239855ab 112 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 106 1.1E-31 T 05-07-2017 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 AC028_RS16780 b00e2a717d36562f5dd728bd239855ab 112 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.8E-16 T 05-07-2017 IPR000361 FeS cluster biogenesis AC028_RS16780 b00e2a717d36562f5dd728bd239855ab 112 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 05-07-2017 IPR017870 FeS cluster insertion, C-terminal, conserved site AC028_RS16780 b00e2a717d36562f5dd728bd239855ab 112 Gene3D G3DSA:2.60.300.12 2 96 5.2E-28 T 05-07-2017 IPR000361 FeS cluster biogenesis AC028_RS12865 a136fb7e1a15d3691d6e8f6a5842e20b 247 Gene3D G3DSA:2.160.20.70 130 246 2.4E-36 T 05-07-2017 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 AC028_RS12865 a136fb7e1a15d3691d6e8f6a5842e20b 247 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 12 246 5.0E-69 T 05-07-2017 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AC028_RS12865 a136fb7e1a15d3691d6e8f6a5842e20b 247 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 8 111 3.5E-19 T 05-07-2017 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 AC028_RS12865 a136fb7e1a15d3691d6e8f6a5842e20b 247 SUPERFAMILY SSF63848 143 246 1.28E-29 T 05-07-2017 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AC028_RS12865 a136fb7e1a15d3691d6e8f6a5842e20b 247 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 145 243 4.0E-30 T 05-07-2017 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AC028_RS12865 a136fb7e1a15d3691d6e8f6a5842e20b 247 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 11 247 26.338 T 05-07-2017 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AC028_RS12860 29b0317505c42908a9ebfdfc88e8e2ca 269 PIRSF PIRSF003092 1 269 2.2E-90 T 05-07-2017 IPR025501 ATP binding protein MinD AC028_RS12860 29b0317505c42908a9ebfdfc88e8e2ca 269 SUPERFAMILY SSF52540 4 267 1.99E-54 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12860 29b0317505c42908a9ebfdfc88e8e2ca 269 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 213 4.4E-32 T 05-07-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AC028_RS12860 29b0317505c42908a9ebfdfc88e8e2ca 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 266 5.8E-110 T 05-07-2017 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 AC028_RS12860 29b0317505c42908a9ebfdfc88e8e2ca 269 Gene3D G3DSA:3.40.50.300 3 246 4.8E-58 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07785 52fc5c5bc32d3493f07ff55fc6918b4d 815 Gene3D G3DSA:3.40.50.300 606 779 5.0E-42 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07785 52fc5c5bc32d3493f07ff55fc6918b4d 815 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 815 0.0 T 05-07-2017 IPR017729 Type VI secretion system, ATPase ClpV1 AC028_RS07785 52fc5c5bc32d3493f07ff55fc6918b4d 815 Gene3D G3DSA:1.10.8.60 378 461 2.2E-28 T 05-07-2017 AC028_RS07785 52fc5c5bc32d3493f07ff55fc6918b4d 815 SMART SM00382 231 376 0.0017 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS07785 52fc5c5bc32d3493f07ff55fc6918b4d 815 SMART SM00382 647 803 1.0E-8 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS07785 52fc5c5bc32d3493f07ff55fc6918b4d 815 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 651 669 2.3E-31 T 05-07-2017 IPR001270 ClpA/B family GO:0005524 AC028_RS07785 52fc5c5bc32d3493f07ff55fc6918b4d 815 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 758 772 2.3E-31 T 05-07-2017 IPR001270 ClpA/B family GO:0005524 AC028_RS07785 52fc5c5bc32d3493f07ff55fc6918b4d 815 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 696 714 2.3E-31 T 05-07-2017 IPR001270 ClpA/B family GO:0005524 AC028_RS07785 52fc5c5bc32d3493f07ff55fc6918b4d 815 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 725 743 2.3E-31 T 05-07-2017 IPR001270 ClpA/B family GO:0005524 AC028_RS07785 52fc5c5bc32d3493f07ff55fc6918b4d 815 Pfam PF07724 AAA domain (Cdc48 subfamily) 646 812 2.6E-39 T 05-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AC028_RS07785 52fc5c5bc32d3493f07ff55fc6918b4d 815 SUPERFAMILY SSF52540 192 526 1.0E-67 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07785 52fc5c5bc32d3493f07ff55fc6918b4d 815 Gene3D G3DSA:3.40.50.300 192 375 8.1E-41 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07785 52fc5c5bc32d3493f07ff55fc6918b4d 815 SUPERFAMILY SSF52540 596 811 4.15E-54 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07785 52fc5c5bc32d3493f07ff55fc6918b4d 815 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 327 339 - T 05-07-2017 IPR018368 ClpA/B, conserved site 1 GO:0005524 AC028_RS07785 52fc5c5bc32d3493f07ff55fc6918b4d 815 SUPERFAMILY SSF81923 12 130 5.49E-15 T 05-07-2017 IPR004176 Clp, N-terminal GO:0019538 AC028_RS07785 52fc5c5bc32d3493f07ff55fc6918b4d 815 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 236 341 6.7E-6 T 05-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AC028_RS07785 52fc5c5bc32d3493f07ff55fc6918b4d 815 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 681 699 - T 05-07-2017 IPR028299 ClpA/B, conserved site 2 AC028_RS07785 52fc5c5bc32d3493f07ff55fc6918b4d 815 Gene3D G3DSA:1.10.1780.10 11 145 1.4E-14 T 05-07-2017 IPR004176 Clp, N-terminal GO:0019538 AC028_RS01020 801260922685fb5375283220e874bae6 244 PIRSF PIRSF015601 5 244 3.0E-59 T 05-07-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AC028_RS01020 801260922685fb5375283220e874bae6 244 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 17 244 1.3E-60 T 05-07-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AC028_RS01020 801260922685fb5375283220e874bae6 244 SUPERFAMILY SSF75217 74 244 6.11E-50 T 05-07-2017 IPR029028 Alpha/beta knot methyltransferases AC028_RS01020 801260922685fb5375283220e874bae6 244 Gene3D G3DSA:3.40.1280.10 75 244 9.2E-59 T 05-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AC028_RS01020 801260922685fb5375283220e874bae6 244 Gene3D G3DSA:2.40.240.20 1 69 3.6E-23 T 05-07-2017 AC028_RS01020 801260922685fb5375283220e874bae6 244 Pfam PF04452 RNA methyltransferase 18 238 1.6E-72 T 05-07-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AC028_RS01020 801260922685fb5375283220e874bae6 244 SUPERFAMILY SSF88697 3 69 8.95E-15 T 05-07-2017 IPR015947 PUA-like domain AC028_RS04395 a5c2d648f451e308e88291c0799a7ef8 526 Pfam PF08811 Protein of unknown function (DUF1800) 49 524 1.2E-128 T 05-07-2017 IPR014917 Protein of unknown function DUF1800 AC028_RS03975 72d2788f452e929ca17f3aa5e49dd885 206 Pfam PF04542 Sigma-70 region 2 29 96 2.5E-16 T 05-07-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS03975 72d2788f452e929ca17f3aa5e49dd885 206 Gene3D G3DSA:1.10.1740.10 8 112 2.1E-32 T 05-07-2017 AC028_RS03975 72d2788f452e929ca17f3aa5e49dd885 206 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 186 2.8E-29 T 05-07-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS03975 72d2788f452e929ca17f3aa5e49dd885 206 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 6 194 1.7E-107 T 05-07-2017 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS03975 72d2788f452e929ca17f3aa5e49dd885 206 SUPERFAMILY SSF88946 10 110 1.57E-28 T 05-07-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS03975 72d2788f452e929ca17f3aa5e49dd885 206 Pfam PF08281 Sigma-70, region 4 134 185 3.6E-18 T 05-07-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS03975 72d2788f452e929ca17f3aa5e49dd885 206 SUPERFAMILY SSF88659 127 186 7.41E-17 T 05-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS03975 72d2788f452e929ca17f3aa5e49dd885 206 Gene3D G3DSA:1.10.10.10 127 191 5.6E-25 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS05090 a06789947c752b4b96ed6418345f78ae 1038 SUPERFAMILY SSF51445 546 934 1.31E-87 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS05090 a06789947c752b4b96ed6418345f78ae 1038 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 385 1034 46.759 T 05-07-2017 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16 AC028_RS05090 a06789947c752b4b96ed6418345f78ae 1038 SUPERFAMILY SSF51445 57 241 2.98E-24 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS05090 a06789947c752b4b96ed6418345f78ae 1038 Pfam PF11896 Domain of unknown function (DUF3416) 388 571 6.9E-50 T 05-07-2017 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16 AC028_RS05090 a06789947c752b4b96ed6418345f78ae 1038 Pfam PF00128 Alpha amylase, catalytic domain 595 723 7.6E-5 T 05-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AC028_RS05090 a06789947c752b4b96ed6418345f78ae 1038 SMART SM00642 581 906 5.4E-5 T 05-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AC028_RS05090 a06789947c752b4b96ed6418345f78ae 1038 Gene3D G3DSA:3.20.20.80 56 242 9.0E-18 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS05090 a06789947c752b4b96ed6418345f78ae 1038 Gene3D G3DSA:3.20.20.80 543 931 2.7E-75 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS05090 a06789947c752b4b96ed6418345f78ae 1038 Gene3D G3DSA:3.20.20.80 441 491 2.7E-75 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS05090 a06789947c752b4b96ed6418345f78ae 1038 Gene3D G3DSA:2.60.40.1180 940 1022 2.7E-5 T 05-07-2017 IPR013780 Glycosyl hydrolase, all-beta AC028_RS19835 d451add6f40f84bc8b306097adcb52a3 301 Pfam PF02616 Segregation and condensation protein ScpA 64 274 1.2E-28 T 05-07-2017 IPR003768 Segregation and condensation protein A AC028_RS19835 d451add6f40f84bc8b306097adcb52a3 301 Hamap MF_01805 Segregation and condensation protein A [scpA]. 47 277 21.998 T 05-07-2017 IPR003768 Segregation and condensation protein A AC028_RS08260 79d6dd2f0a30a3f99f1c3a0741d07b8e 527 SMART SM00798 138 459 2.5E-190 T 05-07-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AC028_RS08260 79d6dd2f0a30a3f99f1c3a0741d07b8e 527 SMART SM00851 20 133 9.0E-50 T 05-07-2017 IPR011607 Methylglyoxal synthase-like domain AC028_RS08260 79d6dd2f0a30a3f99f1c3a0741d07b8e 527 Pfam PF01808 AICARFT/IMPCHase bienzyme 138 457 2.4E-112 T 05-07-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AC028_RS08260 79d6dd2f0a30a3f99f1c3a0741d07b8e 527 PIRSF PIRSF000414 2 527 2.5E-211 T 05-07-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AC028_RS08260 79d6dd2f0a30a3f99f1c3a0741d07b8e 527 SUPERFAMILY SSF52335 8 197 1.96E-63 T 05-07-2017 IPR011607 Methylglyoxal synthase-like domain AC028_RS08260 79d6dd2f0a30a3f99f1c3a0741d07b8e 527 Gene3D G3DSA:3.40.140.20 252 368 1.4E-46 T 05-07-2017 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AC028_RS08260 79d6dd2f0a30a3f99f1c3a0741d07b8e 527 Gene3D G3DSA:3.40.140.20 374 517 1.1E-56 T 05-07-2017 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AC028_RS08260 79d6dd2f0a30a3f99f1c3a0741d07b8e 527 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 8 527 44.554 T 05-07-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AC028_RS08260 79d6dd2f0a30a3f99f1c3a0741d07b8e 527 Gene3D G3DSA:3.40.50.1380 7 191 3.7E-76 T 05-07-2017 IPR011607 Methylglyoxal synthase-like domain AC028_RS08260 79d6dd2f0a30a3f99f1c3a0741d07b8e 527 SUPERFAMILY SSF53927 220 527 3.41E-126 T 05-07-2017 IPR016193 Cytidine deaminase-like GO:0003824 AC028_RS08260 79d6dd2f0a30a3f99f1c3a0741d07b8e 527 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 9 527 4.0E-217 T 05-07-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AC028_RS08260 79d6dd2f0a30a3f99f1c3a0741d07b8e 527 Pfam PF02142 MGS-like domain 20 132 2.0E-24 T 05-07-2017 IPR011607 Methylglyoxal synthase-like domain AC028_RS08935 13743b495706cb394e750c9bc4adbbc1 399 Pfam PF07730 Histidine kinase 214 276 4.8E-12 T 05-07-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AC028_RS08935 13743b495706cb394e750c9bc4adbbc1 399 SUPERFAMILY SSF55874 282 398 2.73E-13 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS08935 13743b495706cb394e750c9bc4adbbc1 399 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 357 9.2E-5 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS08935 13743b495706cb394e750c9bc4adbbc1 399 Gene3D G3DSA:3.30.565.10 261 358 2.6E-5 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13350 e0dea516d14efea54a2b8b655bb21683 461 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 313 454 2.5E-61 T 05-07-2017 IPR018653 Domain of unknown function DUF2083,transcriptional regulator AC028_RS13350 e0dea516d14efea54a2b8b655bb21683 461 SMART SM00530 15 69 8.1E-9 T 05-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AC028_RS13350 e0dea516d14efea54a2b8b655bb21683 461 Pfam PF13560 Helix-turn-helix domain 11 64 5.0E-12 T 05-07-2017 AC028_RS13350 e0dea516d14efea54a2b8b655bb21683 461 Pfam PF06114 Domain of unknown function (DUF955) 190 312 5.0E-21 T 05-07-2017 IPR010359 HTH domain, IrrE-type AC028_RS13350 e0dea516d14efea54a2b8b655bb21683 461 PIRSF PIRSF019251 6 457 2.3E-153 T 05-07-2017 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 AC028_RS13350 e0dea516d14efea54a2b8b655bb21683 461 SUPERFAMILY SSF47413 8 64 9.57E-13 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS13350 e0dea516d14efea54a2b8b655bb21683 461 Gene3D G3DSA:1.10.260.40 3 74 1.4E-17 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS15245 d4e88c8049fa72c7c630679687cd53f2 549 SUPERFAMILY SSF54862 450 548 2.2E-24 T 05-07-2017 AC028_RS15245 d4e88c8049fa72c7c630679687cd53f2 549 Gene3D G3DSA:3.50.50.60 19 288 4.9E-41 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS15245 d4e88c8049fa72c7c630679687cd53f2 549 SUPERFAMILY SSF54373 218 311 2.39E-31 T 05-07-2017 AC028_RS15245 d4e88c8049fa72c7c630679687cd53f2 549 Pfam PF01946 Thi4 family 17 64 1.4E-6 T 05-07-2017 AC028_RS15245 d4e88c8049fa72c7c630679687cd53f2 549 SUPERFAMILY SSF51905 18 217 9.5E-45 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS15245 d4e88c8049fa72c7c630679687cd53f2 549 SUPERFAMILY SSF51905 313 411 9.5E-45 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS15245 d4e88c8049fa72c7c630679687cd53f2 549 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 447 547 2.0E-43 T 05-07-2017 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 Reactome: R-HSA-611105 AC028_RS15245 d4e88c8049fa72c7c630679687cd53f2 549 Gene3D G3DSA:3.30.70.20 471 537 1.4E-5 T 05-07-2017 AC028_RS11815 d09dbf45d5693efcdb25c6943974358d 609 SUPERFAMILY SSF54980 403 516 8.63E-26 T 05-07-2017 IPR009022 Elongation factor G, III-V domain AC028_RS11815 d09dbf45d5693efcdb25c6943974358d 609 Gene3D G3DSA:3.30.70.870 305 404 1.3E-34 T 05-07-2017 AC028_RS11815 d09dbf45d5693efcdb25c6943974358d 609 SMART SM00838 400 488 1.6E-4 T 05-07-2017 IPR000640 Translation elongation factor EFG, V domain AC028_RS11815 d09dbf45d5693efcdb25c6943974358d 609 Pfam PF00679 Elongation factor G C-terminus 401 480 6.6E-23 T 05-07-2017 IPR000640 Translation elongation factor EFG, V domain AC028_RS11815 d09dbf45d5693efcdb25c6943974358d 609 Pfam PF03144 Elongation factor Tu domain 2 220 290 5.0E-10 T 05-07-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AC028_RS11815 d09dbf45d5693efcdb25c6943974358d 609 SUPERFAMILY SSF52540 3 208 7.34E-58 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11815 d09dbf45d5693efcdb25c6943974358d 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 140 9.3E-25 T 05-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AC028_RS11815 d09dbf45d5693efcdb25c6943974358d 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 05-07-2017 IPR031157 Tr-type G domain, conserved site AC028_RS11815 d09dbf45d5693efcdb25c6943974358d 609 PRINTS PR00315 GTP-binding elongation factor signature 52 60 5.6E-13 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS11815 d09dbf45d5693efcdb25c6943974358d 609 PRINTS PR00315 GTP-binding elongation factor signature 124 133 5.6E-13 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS11815 d09dbf45d5693efcdb25c6943974358d 609 PRINTS PR00315 GTP-binding elongation factor signature 72 82 5.6E-13 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS11815 d09dbf45d5693efcdb25c6943974358d 609 PRINTS PR00315 GTP-binding elongation factor signature 8 21 5.6E-13 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS11815 d09dbf45d5693efcdb25c6943974358d 609 SUPERFAMILY SSF50447 152 300 1.39E-33 T 05-07-2017 IPR009000 Translation protein, beta-barrel domain AC028_RS11815 d09dbf45d5693efcdb25c6943974358d 609 Gene3D G3DSA:3.30.70.240 405 482 3.3E-32 T 05-07-2017 IPR000640 Translation elongation factor EFG, V domain AC028_RS11815 d09dbf45d5693efcdb25c6943974358d 609 Gene3D G3DSA:3.40.50.300 4 206 7.9E-65 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11815 d09dbf45d5693efcdb25c6943974358d 609 Pfam PF00009 Elongation factor Tu GTP binding domain 5 195 1.6E-54 T 05-07-2017 AC028_RS11815 d09dbf45d5693efcdb25c6943974358d 609 SUPERFAMILY SSF54980 303 392 1.15E-14 T 05-07-2017 IPR009022 Elongation factor G, III-V domain AC028_RS11815 d09dbf45d5693efcdb25c6943974358d 609 Gene3D G3DSA:2.40.30.10 207 304 2.7E-27 T 05-07-2017 AC028_RS11815 d09dbf45d5693efcdb25c6943974358d 609 Gene3D G3DSA:2.40.50.250 488 582 5.8E-36 T 05-07-2017 AC028_RS11815 d09dbf45d5693efcdb25c6943974358d 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 604 1.3E-280 T 05-07-2017 IPR006298 GTP-binding protein TypA GO:0005525 AC028_RS12800 4c5240374faa09804c25f50b37530110 544 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 110 120 - T 05-07-2017 IPR019819 Carboxylesterase type B, conserved site AC028_RS12800 4c5240374faa09804c25f50b37530110 544 Gene3D G3DSA:3.40.50.1820 35 530 1.1E-146 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS12800 4c5240374faa09804c25f50b37530110 544 SUPERFAMILY SSF53474 41 530 2.9E-123 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS12800 4c5240374faa09804c25f50b37530110 544 Pfam PF00135 Carboxylesterase family 40 528 9.7E-120 T 05-07-2017 IPR002018 Carboxylesterase, type B AC028_RS12800 4c5240374faa09804c25f50b37530110 544 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 206 221 - T 05-07-2017 IPR019826 Carboxylesterase type B, active site AC028_RS16185 ce88a10a3a1a734e0b126262d5f525e2 369 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 27 356 28.056 T 05-07-2017 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AC028_RS16185 ce88a10a3a1a734e0b126262d5f525e2 369 PIRSF PIRSF005485 25 367 1.1E-112 T 05-07-2017 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AC028_RS16185 ce88a10a3a1a734e0b126262d5f525e2 369 SUPERFAMILY SSF55781 97 364 4.97E-59 T 05-07-2017 IPR029016 GAF domain-like AC028_RS16185 ce88a10a3a1a734e0b126262d5f525e2 369 Gene3D G3DSA:1.10.10.10 24 108 7.1E-35 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS16185 ce88a10a3a1a734e0b126262d5f525e2 369 Gene3D G3DSA:3.30.450.40 202 364 1.1E-38 T 05-07-2017 IPR029016 GAF domain-like AC028_RS16185 ce88a10a3a1a734e0b126262d5f525e2 369 SUPERFAMILY SSF46785 27 108 3.84E-23 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS16185 ce88a10a3a1a734e0b126262d5f525e2 369 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 28 99 6.2E-6 T 05-07-2017 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 AC028_RS16185 ce88a10a3a1a734e0b126262d5f525e2 369 Pfam PF01628 HrcA protein C terminal domain 130 349 2.3E-56 T 05-07-2017 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 AC028_RS16185 ce88a10a3a1a734e0b126262d5f525e2 369 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 29 361 1.6E-105 T 05-07-2017 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AC028_RS15685 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 Pfam PF00313 'Cold-shock' DNA-binding domain 8 70 1.8E-27 T 05-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AC028_RS15685 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 SUPERFAMILY SSF50249 4 70 1.33E-23 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS15685 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 PIRSF PIRSF002599 2 71 7.2E-22 T 05-07-2017 IPR012156 Cold shock, CspA GO:0003676 AC028_RS15685 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 Gene3D G3DSA:2.40.50.140 7 70 2.1E-29 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS15685 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 SMART SM00357 8 71 4.6E-28 T 05-07-2017 IPR011129 Cold shock protein GO:0003676 AC028_RS15685 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 ProSitePatterns PS00352 'Cold-shock' domain signature. 20 38 - T 05-07-2017 IPR019844 Cold-shock conserved site AC028_RS15685 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 PRINTS PR00050 Cold shock protein signature 29 38 5.3E-18 T 05-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AC028_RS15685 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 PRINTS PR00050 Cold shock protein signature 9 24 5.3E-18 T 05-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AC028_RS15685 18fb5cdbaf0c04fcb55ac051a6f9fc4d 71 PRINTS PR00050 Cold shock protein signature 44 62 5.3E-18 T 05-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AC028_RS03720 2098cbc093b8602132a0106ed6646e8b 151 Gene3D G3DSA:1.20.1260.10 11 46 6.6E-4 T 05-07-2017 IPR012347 Ferritin-related AC028_RS03720 2098cbc093b8602132a0106ed6646e8b 151 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 7 144 1.0E-54 T 05-07-2017 IPR011971 Conserved hypothetical protein CHP02284 AC028_RS03720 2098cbc093b8602132a0106ed6646e8b 151 Pfam PF09537 Domain of unknown function (DUF2383) 7 114 7.0E-30 T 05-07-2017 IPR019052 Domain of unknown function DUF2383 AC028_RS16985 274a0ba63abe63f7bdd21055932ffd09 703 Gene3D G3DSA:1.10.287.950 465 668 6.8E-60 T 05-07-2017 AC028_RS16985 274a0ba63abe63f7bdd21055932ffd09 703 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 185 9.2E-20 T 05-07-2017 IPR024478 4HB MCP domain AC028_RS16985 274a0ba63abe63f7bdd21055932ffd09 703 SUPERFAMILY SSF158472 216 267 4.58E-8 T 05-07-2017 AC028_RS16985 274a0ba63abe63f7bdd21055932ffd09 703 SUPERFAMILY SSF58104 417 700 4.19E-69 T 05-07-2017 AC028_RS16985 274a0ba63abe63f7bdd21055932ffd09 703 Pfam PF00672 HAMP domain 197 265 5.5E-13 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS16985 274a0ba63abe63f7bdd21055932ffd09 703 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 511 696 1.0E-56 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS16985 274a0ba63abe63f7bdd21055932ffd09 703 SMART SM00304 397 449 22.0 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS16985 274a0ba63abe63f7bdd21055932ffd09 703 SMART SM00304 307 358 4.0 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS16985 274a0ba63abe63f7bdd21055932ffd09 703 SMART SM00304 216 268 1.3E-5 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS16985 274a0ba63abe63f7bdd21055932ffd09 703 SMART SM00283 450 697 3.1E-86 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS21430 30bae0f37cdf1ad274e257397e21f282 1248 Pfam PF05567 Neisseria PilC beta-propeller domain 715 1087 1.2E-39 T 05-07-2017 IPR008707 PilC beta-propeller domain AC028_RS02510 3ab60e458202ad2412d3c43253796d00 717 SMART SM00490 529 613 5.1E-22 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS02510 3ab60e458202ad2412d3c43253796d00 717 SUPERFAMILY SSF52540 463 678 2.44E-42 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02510 3ab60e458202ad2412d3c43253796d00 717 SUPERFAMILY SSF50249 17 183 1.23E-30 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS02510 3ab60e458202ad2412d3c43253796d00 717 Pfam PF14520 Helix-hairpin-helix domain 18 61 0.0015 T 05-07-2017 AC028_RS02510 3ab60e458202ad2412d3c43253796d00 717 Pfam PF00270 DEAD/DEAH box helicase 284 442 1.8E-15 T 05-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AC028_RS02510 3ab60e458202ad2412d3c43253796d00 717 Pfam PF17191 RecG wedge domain 24 180 2.2E-10 T 05-07-2017 IPR033454 RecG, wedge domain AC028_RS02510 3ab60e458202ad2412d3c43253796d00 717 Gene3D G3DSA:3.40.50.300 266 464 1.1E-53 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02510 3ab60e458202ad2412d3c43253796d00 717 Pfam PF00271 Helicase conserved C-terminal domain 533 612 3.2E-18 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS02510 3ab60e458202ad2412d3c43253796d00 717 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 37 686 4.4E-213 T 05-07-2017 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 AC028_RS02510 3ab60e458202ad2412d3c43253796d00 717 SUPERFAMILY SSF52540 193 464 2.47E-56 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02510 3ab60e458202ad2412d3c43253796d00 717 Gene3D G3DSA:3.40.50.300 465 662 4.1E-45 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02510 3ab60e458202ad2412d3c43253796d00 717 SMART SM00487 276 470 2.3E-29 T 05-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_RS02510 3ab60e458202ad2412d3c43253796d00 717 Gene3D G3DSA:2.40.50.140 55 149 1.5E-15 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS10980 2abc3cb46b1ab7e251e94ce79c6f6c90 264 SUPERFAMILY SSF55831 3 264 6.67E-128 T 05-07-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AC028_RS10980 2abc3cb46b1ab7e251e94ce79c6f6c90 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.359 T 05-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AC028_RS10980 2abc3cb46b1ab7e251e94ce79c6f6c90 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 6.7E-97 T 05-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AC028_RS10980 2abc3cb46b1ab7e251e94ce79c6f6c90 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 84 6.0E-42 T 05-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AC028_RS10980 2abc3cb46b1ab7e251e94ce79c6f6c90 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 7.1E-49 T 05-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AC028_RS10980 2abc3cb46b1ab7e251e94ce79c6f6c90 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 7.1E-49 T 05-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AC028_RS10980 2abc3cb46b1ab7e251e94ce79c6f6c90 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 7.1E-49 T 05-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AC028_RS10980 2abc3cb46b1ab7e251e94ce79c6f6c90 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 7.1E-49 T 05-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AC028_RS10980 2abc3cb46b1ab7e251e94ce79c6f6c90 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 7.1E-49 T 05-07-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AC028_RS10980 2abc3cb46b1ab7e251e94ce79c6f6c90 264 Pfam PF00303 Thymidylate synthase 3 264 2.0E-119 T 05-07-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AC028_RS10980 2abc3cb46b1ab7e251e94ce79c6f6c90 264 Gene3D G3DSA:3.30.572.10 2 264 7.4E-130 T 05-07-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AC028_RS10980 2abc3cb46b1ab7e251e94ce79c6f6c90 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 05-07-2017 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 AC028_RS09915 09ce538943738281e2d748ef61492b8b 362 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 306 1.4E-15 T 05-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_RS09915 09ce538943738281e2d748ef61492b8b 362 SUPERFAMILY SSF111369 134 191 3.53E-5 T 05-07-2017 AC028_RS09915 09ce538943738281e2d748ef61492b8b 362 Gene3D G3DSA:2.40.50.100 227 260 5.4E-19 T 05-07-2017 AC028_RS09915 09ce538943738281e2d748ef61492b8b 362 Gene3D G3DSA:2.40.50.100 65 96 5.4E-19 T 05-07-2017 AC028_RS09915 09ce538943738281e2d748ef61492b8b 362 SUPERFAMILY SSF111369 64 137 6.15E-11 T 05-07-2017 AC028_RS09915 09ce538943738281e2d748ef61492b8b 362 SUPERFAMILY SSF111369 206 283 7.59E-12 T 05-07-2017 AC028_RS12275 e894c914a0c92564abf0e49edfb2c061 64 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 1.0E-19 T 05-07-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS12275 e894c914a0c92564abf0e49edfb2c061 64 SUPERFAMILY SSF57829 2 54 4.46E-18 T 05-07-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 AC028_RS12275 e894c914a0c92564abf0e49edfb2c061 64 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.784 T 05-07-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS12275 e894c914a0c92564abf0e49edfb2c061 64 Pfam PF01783 Ribosomal L32p protein family 2 55 1.3E-20 T 05-07-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS15220 de39f47a32387c9cf876344900a9bbbe 388 Gene3D G3DSA:1.10.1040.10 198 284 3.0E-34 T 05-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AC028_RS15220 de39f47a32387c9cf876344900a9bbbe 388 PIRSF PIRSF000124 1 388 1.8E-136 T 05-07-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AC028_RS15220 de39f47a32387c9cf876344900a9bbbe 388 SUPERFAMILY SSF51735 1 194 3.63E-46 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS15220 de39f47a32387c9cf876344900a9bbbe 388 SUPERFAMILY SSF52413 283 387 1.05E-26 T 05-07-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AC028_RS15220 de39f47a32387c9cf876344900a9bbbe 388 Gene3D G3DSA:3.40.50.720 1 197 1.2E-63 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS15220 de39f47a32387c9cf876344900a9bbbe 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 3.1E-99 T 05-07-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AC028_RS15220 de39f47a32387c9cf876344900a9bbbe 388 SUPERFAMILY SSF48179 191 287 4.59E-29 T 05-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AC028_RS15220 de39f47a32387c9cf876344900a9bbbe 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 374 1.1E-7 T 05-07-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AC028_RS15220 de39f47a32387c9cf876344900a9bbbe 388 Gene3D G3DSA:3.40.50.720 285 387 5.9E-49 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS15220 de39f47a32387c9cf876344900a9bbbe 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 1.3E-25 T 05-07-2017 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AC028_RS15220 de39f47a32387c9cf876344900a9bbbe 388 PIRSF PIRSF500134 1 342 7.9E-119 T 05-07-2017 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346 AC028_RS15220 de39f47a32387c9cf876344900a9bbbe 388 SMART SM00984 300 387 9.9E-15 T 05-07-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AC028_RS15220 de39f47a32387c9cf876344900a9bbbe 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 1.8E-31 T 05-07-2017 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AC028_RS06245 dd6fa31cfa2e3ba7354bd8f5e2caedb7 262 SUPERFAMILY SSF100950 4 245 2.56E-72 T 05-07-2017 AC028_RS06245 dd6fa31cfa2e3ba7354bd8f5e2caedb7 262 Gene3D G3DSA:3.40.810.20 2 244 1.0E-91 T 05-07-2017 AC028_RS06245 dd6fa31cfa2e3ba7354bd8f5e2caedb7 262 SMART SM00882 8 217 6.8E-41 T 05-07-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 AC028_RS06245 dd6fa31cfa2e3ba7354bd8f5e2caedb7 262 Pfam PF01144 Coenzyme A transferase 8 216 6.4E-51 T 05-07-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 AC028_RS07360 6d7353fb5a2fe2f788c6ca21326b7c02 302 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 10 301 1.4E-158 T 05-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AC028_RS07360 6d7353fb5a2fe2f788c6ca21326b7c02 302 SUPERFAMILY SSF55681 10 293 7.21E-132 T 05-07-2017 AC028_RS07360 6d7353fb5a2fe2f788c6ca21326b7c02 302 Gene3D G3DSA:1.20.58.180 218 298 7.2E-36 T 05-07-2017 AC028_RS07360 6d7353fb5a2fe2f788c6ca21326b7c02 302 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 11 293 3.2E-146 T 05-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AC028_RS07360 6d7353fb5a2fe2f788c6ca21326b7c02 302 Gene3D G3DSA:3.30.930.10 8 217 2.3E-103 T 05-07-2017 AC028_RS07360 6d7353fb5a2fe2f788c6ca21326b7c02 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 63 78 1.9E-67 T 05-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AC028_RS07360 6d7353fb5a2fe2f788c6ca21326b7c02 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 141 161 1.9E-67 T 05-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AC028_RS07360 6d7353fb5a2fe2f788c6ca21326b7c02 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 164 179 1.9E-67 T 05-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AC028_RS07360 6d7353fb5a2fe2f788c6ca21326b7c02 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 1.9E-67 T 05-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AC028_RS07360 6d7353fb5a2fe2f788c6ca21326b7c02 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 115 139 1.9E-67 T 05-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AC028_RS07360 6d7353fb5a2fe2f788c6ca21326b7c02 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 104 1.9E-67 T 05-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AC028_RS07360 6d7353fb5a2fe2f788c6ca21326b7c02 302 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 9 294 59.504 T 05-07-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AC028_RS17960 7feead502009902675836ed2d6ff4d75 238 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 167 3.9E-41 T 05-07-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AC028_RS17960 7feead502009902675836ed2d6ff4d75 238 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 144 161 - T 05-07-2017 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AC028_RS17960 7feead502009902675836ed2d6ff4d75 238 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 123 236 1.6E-31 T 05-07-2017 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AC028_RS17960 7feead502009902675836ed2d6ff4d75 238 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 120 2.3E-25 T 05-07-2017 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AC028_RS17960 7feead502009902675836ed2d6ff4d75 238 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 238 28.807 T 05-07-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AC028_RS17960 7feead502009902675836ed2d6ff4d75 238 Gene3D G3DSA:3.30.360.10 176 207 2.0E-6 T 05-07-2017 AC028_RS17960 7feead502009902675836ed2d6ff4d75 238 Gene3D G3DSA:3.40.50.720 4 157 1.7E-41 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS17960 7feead502009902675836ed2d6ff4d75 238 SUPERFAMILY SSF51735 5 121 2.68E-33 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS17960 7feead502009902675836ed2d6ff4d75 238 SUPERFAMILY SSF51735 209 237 2.68E-33 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS17960 7feead502009902675836ed2d6ff4d75 238 PIRSF PIRSF000161 4 238 2.7E-72 T 05-07-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AC028_RS17960 7feead502009902675836ed2d6ff4d75 238 SUPERFAMILY SSF55347 122 209 1.05E-22 T 05-07-2017 AC028_RS00510 34c29e1c297a68ffe428ed548a54a4c0 152 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 16 142 5.5E-30 T 05-07-2017 IPR002178 PTS EIIA type-2 domain AC028_RS00510 34c29e1c297a68ffe428ed548a54a4c0 152 Gene3D G3DSA:3.40.930.10 15 143 4.0E-36 T 05-07-2017 IPR002178 PTS EIIA type-2 domain AC028_RS00510 34c29e1c297a68ffe428ed548a54a4c0 152 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 49 65 - T 05-07-2017 IPR002178 PTS EIIA type-2 domain AC028_RS00510 34c29e1c297a68ffe428ed548a54a4c0 152 SUPERFAMILY SSF55804 13 142 4.19E-32 T 05-07-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AC028_RS19065 3840252beceb60f61bacad077c6c9bad 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 268 8.4E-29 T 05-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_RS19065 3840252beceb60f61bacad077c6c9bad 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 348 3.3E-94 T 05-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AC028_RS19065 3840252beceb60f61bacad077c6c9bad 371 Gene3D G3DSA:2.40.50.100 70 102 1.8E-18 T 05-07-2017 AC028_RS19065 3840252beceb60f61bacad077c6c9bad 371 Gene3D G3DSA:2.40.50.100 163 196 1.8E-18 T 05-07-2017 AC028_RS19065 3840252beceb60f61bacad077c6c9bad 371 Pfam PF00529 HlyD membrane-fusion protein of T1SS 107 334 1.5E-7 T 05-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AC028_RS19065 3840252beceb60f61bacad077c6c9bad 371 SUPERFAMILY SSF111369 62 274 1.44E-37 T 05-07-2017 AC028_RS01705 59df77d155c6e771e721c8a95520e2bf 370 Gene3D G3DSA:3.40.190.10 159 247 1.6E-26 T 05-07-2017 AC028_RS01705 59df77d155c6e771e721c8a95520e2bf 370 Pfam PF09084 NMT1/THI5 like 116 231 2.9E-11 T 05-07-2017 IPR015168 SsuA/THI5-like AC028_RS01705 59df77d155c6e771e721c8a95520e2bf 370 SUPERFAMILY SSF53850 74 316 8.84E-45 T 05-07-2017 AC028_RS01705 59df77d155c6e771e721c8a95520e2bf 370 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 77 316 5.6E-87 T 05-07-2017 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 AC028_RS01705 59df77d155c6e771e721c8a95520e2bf 370 SMART SM00062 76 291 1.2E-11 T 05-07-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AC028_RS19695 e625b33f5dbac5fa3244c28a40f4b7d4 303 SUPERFAMILY SSF53223 12 131 2.88E-36 T 05-07-2017 AC028_RS19695 e625b33f5dbac5fa3244c28a40f4b7d4 303 Gene3D G3DSA:3.40.192.10 16 149 1.0E-44 T 05-07-2017 AC028_RS19695 e625b33f5dbac5fa3244c28a40f4b7d4 303 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 133 292 5.3E-63 T 05-07-2017 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AC028_RS19695 e625b33f5dbac5fa3244c28a40f4b7d4 303 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 271 279 - T 05-07-2017 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AC028_RS19695 e625b33f5dbac5fa3244c28a40f4b7d4 303 Gene3D G3DSA:3.40.50.720 150 275 3.1E-45 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS19695 e625b33f5dbac5fa3244c28a40f4b7d4 303 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 14 130 5.9E-35 T 05-07-2017 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AC028_RS19695 e625b33f5dbac5fa3244c28a40f4b7d4 303 SUPERFAMILY SSF51735 132 290 2.39E-44 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS19695 e625b33f5dbac5fa3244c28a40f4b7d4 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 119 140 5.7E-81 T 05-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AC028_RS19695 e625b33f5dbac5fa3244c28a40f4b7d4 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 43 65 5.7E-81 T 05-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AC028_RS19695 e625b33f5dbac5fa3244c28a40f4b7d4 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 267 285 5.7E-81 T 05-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AC028_RS19695 e625b33f5dbac5fa3244c28a40f4b7d4 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 215 244 5.7E-81 T 05-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AC028_RS19695 e625b33f5dbac5fa3244c28a40f4b7d4 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 84 111 5.7E-81 T 05-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AC028_RS19695 e625b33f5dbac5fa3244c28a40f4b7d4 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 250 266 5.7E-81 T 05-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AC028_RS19695 e625b33f5dbac5fa3244c28a40f4b7d4 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 164 184 5.7E-81 T 05-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AC028_RS19695 e625b33f5dbac5fa3244c28a40f4b7d4 303 Hamap MF_01576 Bifunctional protein FolD [folD]. 12 294 36.736 T 05-07-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AC028_RS01965 a16864ba7aab05788adff9771423bad2 219 Gene3D G3DSA:2.40.50.90 21 110 5.5E-25 T 05-07-2017 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AC028_RS01965 a16864ba7aab05788adff9771423bad2 219 SUPERFAMILY SSF50199 21 142 1.96E-33 T 05-07-2017 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AC028_RS01965 a16864ba7aab05788adff9771423bad2 219 Pfam PF00565 Staphylococcal nuclease homologue 34 136 4.2E-19 T 05-07-2017 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AC028_RS01965 a16864ba7aab05788adff9771423bad2 219 SMART SM00318 14 137 1.3E-26 T 05-07-2017 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AC028_RS06040 4bfabc9bcaf29ee13bcd9c91009ebf30 407 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 377 1.2E-83 T 05-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AC028_RS06040 4bfabc9bcaf29ee13bcd9c91009ebf30 407 SUPERFAMILY SSF111369 56 300 2.09E-78 T 05-07-2017 AC028_RS06040 4bfabc9bcaf29ee13bcd9c91009ebf30 407 Gene3D G3DSA:2.40.50.100 69 100 1.5E-24 T 05-07-2017 AC028_RS06040 4bfabc9bcaf29ee13bcd9c91009ebf30 407 Gene3D G3DSA:2.40.50.100 175 209 1.5E-24 T 05-07-2017 AC028_RS06040 4bfabc9bcaf29ee13bcd9c91009ebf30 407 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 295 2.9E-14 T 05-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_RS07475 28801205d7cad0ade1405ff16135d026 880 Pfam PF15979 Glycosyl hydrolase family 115 202 543 4.2E-144 T 05-07-2017 IPR031924 Glycosyl hydrolase family 115 AC028_RS07475 28801205d7cad0ade1405ff16135d026 880 Gene3D G3DSA:3.30.379.10 62 185 1.8E-14 T 05-07-2017 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AC028_RS17870 51dfb2f9d33667ed33d214444e095e3d 493 Pfam PF13520 Amino acid permease 44 461 4.1E-60 T 05-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AC028_RS17870 51dfb2f9d33667ed33d214444e095e3d 493 PIRSF PIRSF006060 24 492 8.8E-89 T 05-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AC028_RS16880 aa611ec67046a75849fee94d66c74fe4 401 Gene3D G3DSA:2.30.40.10 347 396 2.8E-6 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS16880 aa611ec67046a75849fee94d66c74fe4 401 Hamap MF_00372 Imidazolonepropionase [hutI]. 4 401 40.727 T 05-07-2017 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AC028_RS16880 aa611ec67046a75849fee94d66c74fe4 401 Gene3D G3DSA:3.20.20.140 78 346 2.3E-38 T 05-07-2017 AC028_RS16880 aa611ec67046a75849fee94d66c74fe4 401 SUPERFAMILY SSF51338 363 400 8.86E-30 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS16880 aa611ec67046a75849fee94d66c74fe4 401 SUPERFAMILY SSF51338 2 64 8.86E-30 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS16880 aa611ec67046a75849fee94d66c74fe4 401 SUPERFAMILY SSF51556 64 361 2.13E-81 T 05-07-2017 IPR032466 Metal-dependent hydrolase AC028_RS16880 aa611ec67046a75849fee94d66c74fe4 401 Gene3D G3DSA:2.30.40.10 4 77 2.9E-8 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS16880 aa611ec67046a75849fee94d66c74fe4 401 Pfam PF07969 Amidohydrolase family 190 378 5.3E-13 T 05-07-2017 IPR013108 Amidohydrolase 3 AC028_RS16880 aa611ec67046a75849fee94d66c74fe4 401 TIGRFAM TIGR01224 hutI: imidazolonepropionase 26 399 8.0E-137 T 05-07-2017 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AC028_RS08845 a43ce3eca562ef4f6229535b4eb203dc 399 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 4 82 2.0E-23 T 05-07-2017 IPR011933 Double transmembrane domain AC028_RS08845 a43ce3eca562ef4f6229535b4eb203dc 399 Pfam PF07584 Aerotolerance regulator N-terminal 6 77 3.2E-9 T 05-07-2017 IPR024163 Aerotolerance regulator, N-terminal AC028_RS20870 96cb1bac83a3a65953c49ee1d0527ed7 381 Gene3D G3DSA:3.20.20.105 2 369 2.8E-160 T 05-07-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AC028_RS20870 96cb1bac83a3a65953c49ee1d0527ed7 381 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 371 3.1E-150 T 05-07-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AC028_RS20870 96cb1bac83a3a65953c49ee1d0527ed7 381 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 363 57.3 T 05-07-2017 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AC028_RS20870 96cb1bac83a3a65953c49ee1d0527ed7 381 SUPERFAMILY SSF51713 3 368 2.62E-153 T 05-07-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AC028_RS20870 96cb1bac83a3a65953c49ee1d0527ed7 381 Pfam PF01702 Queuine tRNA-ribosyltransferase 129 365 6.8E-87 T 05-07-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AC028_RS20870 96cb1bac83a3a65953c49ee1d0527ed7 381 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 371 6.6E-156 T 05-07-2017 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AC028_RS22055 089bba91644f70c2bb02f28013ddfb38 285 Pfam PF14561 Tetratricopeptide repeat 199 285 1.7E-17 T 05-07-2017 AC028_RS22055 089bba91644f70c2bb02f28013ddfb38 285 SUPERFAMILY SSF52833 6 111 2.16E-34 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS22055 089bba91644f70c2bb02f28013ddfb38 285 Gene3D G3DSA:1.25.40.10 200 285 1.3E-21 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS22055 089bba91644f70c2bb02f28013ddfb38 285 ProSitePatterns PS00194 Thioredoxin family active site. 29 47 - T 05-07-2017 IPR017937 Thioredoxin, conserved site GO:0045454 AC028_RS22055 089bba91644f70c2bb02f28013ddfb38 285 Gene3D G3DSA:1.25.40.10 135 195 2.0E-4 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS22055 089bba91644f70c2bb02f28013ddfb38 285 Pfam PF14559 Tetratricopeptide repeat 135 192 5.2E-7 T 05-07-2017 AC028_RS22055 089bba91644f70c2bb02f28013ddfb38 285 PRINTS PR00421 Thioredoxin family signature 36 45 1.7E-6 T 05-07-2017 AC028_RS22055 089bba91644f70c2bb02f28013ddfb38 285 PRINTS PR00421 Thioredoxin family signature 28 36 1.7E-6 T 05-07-2017 AC028_RS22055 089bba91644f70c2bb02f28013ddfb38 285 PRINTS PR00421 Thioredoxin family signature 76 87 1.7E-6 T 05-07-2017 AC028_RS22055 089bba91644f70c2bb02f28013ddfb38 285 Pfam PF00085 Thioredoxin 8 111 3.4E-27 T 05-07-2017 IPR013766 Thioredoxin domain GO:0045454 AC028_RS22055 089bba91644f70c2bb02f28013ddfb38 285 Gene3D G3DSA:3.40.30.10 3 111 3.9E-34 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS22055 089bba91644f70c2bb02f28013ddfb38 285 SUPERFAMILY SSF48435 98 254 4.71E-5 T 05-07-2017 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 AC028_RS22055 089bba91644f70c2bb02f28013ddfb38 285 TIGRFAM TIGR01068 thioredoxin: thioredoxin 13 111 6.0E-31 T 05-07-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AC028_RS21065 f9ec254e4e322ca366d7584dcf551ea0 602 Pfam PF05960 Bacterial protein of unknown function (DUF885) 59 587 4.2E-164 T 05-07-2017 IPR010281 Protein of unknown function DUF885 AC028_RS14235 047cdf8f1b84a74915ba3229abf769a0 710 Pfam PF00672 HAMP domain 196 264 4.8E-17 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS14235 047cdf8f1b84a74915ba3229abf769a0 710 SUPERFAMILY SSF158472 215 266 2.22E-10 T 05-07-2017 AC028_RS14235 047cdf8f1b84a74915ba3229abf769a0 710 SMART SM00304 396 448 5.0 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS14235 047cdf8f1b84a74915ba3229abf769a0 710 SMART SM00304 306 357 55.0 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS14235 047cdf8f1b84a74915ba3229abf769a0 710 SMART SM00304 215 267 2.1E-10 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS14235 047cdf8f1b84a74915ba3229abf769a0 710 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 506 695 5.0E-59 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS14235 047cdf8f1b84a74915ba3229abf769a0 710 SUPERFAMILY SSF58104 416 697 3.27E-71 T 05-07-2017 AC028_RS14235 047cdf8f1b84a74915ba3229abf769a0 710 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 470 499 2.1E-58 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS14235 047cdf8f1b84a74915ba3229abf769a0 710 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 251 266 2.1E-58 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS14235 047cdf8f1b84a74915ba3229abf769a0 710 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 576 605 2.1E-58 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS14235 047cdf8f1b84a74915ba3229abf769a0 710 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 624 653 2.1E-58 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS14235 047cdf8f1b84a74915ba3229abf769a0 710 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 547 574 2.1E-58 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS14235 047cdf8f1b84a74915ba3229abf769a0 710 SMART SM00283 449 696 9.0E-92 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS14235 047cdf8f1b84a74915ba3229abf769a0 710 Gene3D G3DSA:1.10.287.950 464 668 2.3E-61 T 05-07-2017 AC028_RS07720 1f86c00e98c7c5324d8fe8e59ae9aaac 464 SUPERFAMILY SSF51905 12 235 1.62E-19 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS07720 1f86c00e98c7c5324d8fe8e59ae9aaac 464 Pfam PF13454 FAD-NAD(P)-binding 13 164 8.3E-33 T 05-07-2017 AC028_RS07720 1f86c00e98c7c5324d8fe8e59ae9aaac 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 199 217 5.3E-6 T 05-07-2017 AC028_RS07720 1f86c00e98c7c5324d8fe8e59ae9aaac 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 5.3E-6 T 05-07-2017 AC028_RS07720 1f86c00e98c7c5324d8fe8e59ae9aaac 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 5.3E-6 T 05-07-2017 AC028_RS07720 1f86c00e98c7c5324d8fe8e59ae9aaac 464 Gene3D G3DSA:3.50.50.60 197 269 3.2E-5 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS07720 1f86c00e98c7c5324d8fe8e59ae9aaac 464 Gene3D G3DSA:3.50.50.60 334 431 3.2E-5 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS07720 1f86c00e98c7c5324d8fe8e59ae9aaac 464 Gene3D G3DSA:3.50.50.60 12 63 2.9E-10 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS07720 1f86c00e98c7c5324d8fe8e59ae9aaac 464 Gene3D G3DSA:3.50.50.60 99 179 2.9E-10 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS13725 0d1db15417c4e398f5f7786befa7f137 365 Gene3D G3DSA:3.20.20.120 123 353 1.0E-79 T 05-07-2017 IPR029065 Enolase C-terminal domain-like AC028_RS13725 0d1db15417c4e398f5f7786befa7f137 365 Pfam PF13378 Enolase C-terminal domain-like 144 354 1.3E-50 T 05-07-2017 IPR029065 Enolase C-terminal domain-like AC028_RS13725 0d1db15417c4e398f5f7786befa7f137 365 SMART SM00922 141 239 3.1E-25 T 05-07-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AC028_RS13725 0d1db15417c4e398f5f7786befa7f137 365 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 99 124 - T 05-07-2017 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AC028_RS13725 0d1db15417c4e398f5f7786befa7f137 365 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 11 124 2.7E-18 T 05-07-2017 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AC028_RS13725 0d1db15417c4e398f5f7786befa7f137 365 SUPERFAMILY SSF54826 1 125 3.68E-31 T 05-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS13725 0d1db15417c4e398f5f7786befa7f137 365 Gene3D G3DSA:3.30.390.10 1 122 2.5E-46 T 05-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS13725 0d1db15417c4e398f5f7786befa7f137 365 SUPERFAMILY SSF51604 113 355 8.52E-67 T 05-07-2017 IPR029065 Enolase C-terminal domain-like AC028_RS17315 a505095589e2d8d0b45acc9913937fac 126 Gene3D G3DSA:3.40.1230.10 1 122 3.8E-35 T 05-07-2017 IPR007523 NDUFAF3/Mth938 domain-containing protein AC028_RS17315 a505095589e2d8d0b45acc9913937fac 126 SUPERFAMILY SSF64076 1 122 4.71E-31 T 05-07-2017 IPR007523 NDUFAF3/Mth938 domain-containing protein AC028_RS17315 a505095589e2d8d0b45acc9913937fac 126 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 20 121 2.5E-24 T 05-07-2017 IPR007523 NDUFAF3/Mth938 domain-containing protein AC028_RS00245 6ec0891c8ec61c273a05636838e7d431 298 SUPERFAMILY SSF117396 160 287 2.09E-83 T 05-07-2017 IPR002763 Protein of unknown function DUF72 AC028_RS00245 6ec0891c8ec61c273a05636838e7d431 298 SUPERFAMILY SSF117396 1 131 2.09E-83 T 05-07-2017 IPR002763 Protein of unknown function DUF72 AC028_RS00245 6ec0891c8ec61c273a05636838e7d431 298 Gene3D G3DSA:3.20.20.410 1 288 4.0E-91 T 05-07-2017 IPR002763 Protein of unknown function DUF72 AC028_RS00245 6ec0891c8ec61c273a05636838e7d431 298 Pfam PF01904 Protein of unknown function DUF72 20 284 3.9E-71 T 05-07-2017 IPR002763 Protein of unknown function DUF72 AC028_RS11995 f70d182484a446751d45ba8a0f511c24 700 Hamap MF_00347 Polyphosphate kinase [ppk]. 24 700 32.236 T 05-07-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AC028_RS11995 f70d182484a446751d45ba8a0f511c24 700 SUPERFAMILY SSF56024 519 699 2.69E-69 T 05-07-2017 AC028_RS11995 f70d182484a446751d45ba8a0f511c24 700 Pfam PF13089 Polyphosphate kinase N-terminal domain 27 131 2.0E-30 T 05-07-2017 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AC028_RS11995 f70d182484a446751d45ba8a0f511c24 700 SUPERFAMILY SSF56024 335 511 2.83E-56 T 05-07-2017 AC028_RS11995 f70d182484a446751d45ba8a0f511c24 700 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 27 698 9.4E-281 T 05-07-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AC028_RS11995 f70d182484a446751d45ba8a0f511c24 700 SUPERFAMILY SSF140356 24 126 3.92E-34 T 05-07-2017 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AC028_RS11995 f70d182484a446751d45ba8a0f511c24 700 Gene3D G3DSA:3.30.870.10 519 699 3.6E-71 T 05-07-2017 AC028_RS11995 f70d182484a446751d45ba8a0f511c24 700 SUPERFAMILY SSF143724 130 335 2.55E-59 T 05-07-2017 AC028_RS11995 f70d182484a446751d45ba8a0f511c24 700 PIRSF PIRSF015589 7 700 1.8E-264 T 05-07-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AC028_RS11995 f70d182484a446751d45ba8a0f511c24 700 Pfam PF02503 Polyphosphate kinase middle domain 141 342 7.0E-59 T 05-07-2017 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AC028_RS11995 f70d182484a446751d45ba8a0f511c24 700 Pfam PF13090 Polyphosphate kinase C-terminal domain 349 696 7.3E-150 T 05-07-2017 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 AC028_RS11995 f70d182484a446751d45ba8a0f511c24 700 Gene3D G3DSA:3.30.1840.10 129 320 1.9E-63 T 05-07-2017 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AC028_RS11995 f70d182484a446751d45ba8a0f511c24 700 Gene3D G3DSA:3.30.870.10 336 518 5.0E-74 T 05-07-2017 AC028_RS10635 b8a2078b6b19875b05e0e0d05207dde8 430 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 198 361 2.7E-38 T 05-07-2017 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 AC028_RS10635 b8a2078b6b19875b05e0e0d05207dde8 430 Gene3D G3DSA:3.40.50.2000 267 342 5.0E-4 T 05-07-2017 AC028_RS10635 b8a2078b6b19875b05e0e0d05207dde8 430 Gene3D G3DSA:3.40.50.2000 21 209 4.5E-62 T 05-07-2017 AC028_RS10635 b8a2078b6b19875b05e0e0d05207dde8 430 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 21 369 35.899 T 05-07-2017 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AC028_RS10635 b8a2078b6b19875b05e0e0d05207dde8 430 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 19 365 2.1E-108 T 05-07-2017 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AC028_RS10635 b8a2078b6b19875b05e0e0d05207dde8 430 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 21 158 3.7E-40 T 05-07-2017 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AC028_RS10635 b8a2078b6b19875b05e0e0d05207dde8 430 SUPERFAMILY SSF53756 20 368 2.07E-113 T 05-07-2017 AC028_RS11635 b6148c406cf6021627824522bdfce5b1 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.947 T 05-07-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11635 b6148c406cf6021627824522bdfce5b1 103 SMART SM01403 7 101 5.7E-55 T 05-07-2017 IPR027486 Ribosomal protein S10 domain AC028_RS11635 b6148c406cf6021627824522bdfce5b1 103 SUPERFAMILY SSF54999 5 102 1.83E-36 T 05-07-2017 IPR027486 Ribosomal protein S10 domain AC028_RS11635 b6148c406cf6021627824522bdfce5b1 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 05-07-2017 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11635 b6148c406cf6021627824522bdfce5b1 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.9E-34 T 05-07-2017 IPR027486 Ribosomal protein S10 domain AC028_RS11635 b6148c406cf6021627824522bdfce5b1 103 Gene3D G3DSA:3.30.70.600 4 102 1.1E-42 T 05-07-2017 IPR027486 Ribosomal protein S10 domain AC028_RS11635 b6148c406cf6021627824522bdfce5b1 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 4.4E-45 T 05-07-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11635 b6148c406cf6021627824522bdfce5b1 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.7E-18 T 05-07-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11635 b6148c406cf6021627824522bdfce5b1 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.7E-18 T 05-07-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11635 b6148c406cf6021627824522bdfce5b1 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.7E-18 T 05-07-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS03745 a7f149300d221320fbbe9e4acf02bdc0 111 SUPERFAMILY SSF57783 3 37 7.91E-12 T 05-07-2017 AC028_RS03745 a7f149300d221320fbbe9e4acf02bdc0 111 Pfam PF08274 PhnA Zinc-Ribbon 4 32 1.3E-11 T 05-07-2017 IPR013987 PhnA protein, N-terminal AC028_RS03745 a7f149300d221320fbbe9e4acf02bdc0 111 SUPERFAMILY SSF82057 40 111 2.79E-24 T 05-07-2017 AC028_RS03745 a7f149300d221320fbbe9e4acf02bdc0 111 Pfam PF03831 PhnA domain 43 111 2.9E-30 T 05-07-2017 IPR013988 PhnA protein, C-terminal AC028_RS03745 a7f149300d221320fbbe9e4acf02bdc0 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 111 7.7E-32 T 05-07-2017 IPR004624 PhnA protein AC028_RS03745 a7f149300d221320fbbe9e4acf02bdc0 111 Gene3D G3DSA:2.20.25.10 1 39 1.4E-17 T 05-07-2017 AC028_RS03745 a7f149300d221320fbbe9e4acf02bdc0 111 Gene3D G3DSA:2.30.30.40 41 111 5.3E-31 T 05-07-2017 AC028_RS05625 39f8a3aa665908f1d96c20425a136c5d 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 9.2E-6 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS05625 39f8a3aa665908f1d96c20425a136c5d 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 9.2E-6 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS05625 39f8a3aa665908f1d96c20425a136c5d 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 177 196 9.2E-6 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS05625 39f8a3aa665908f1d96c20425a136c5d 309 SUPERFAMILY SSF51735 13 260 1.16E-50 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS05625 39f8a3aa665908f1d96c20425a136c5d 309 Gene3D G3DSA:3.40.50.720 13 238 1.8E-55 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS05625 39f8a3aa665908f1d96c20425a136c5d 309 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 164 192 - T 05-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AC028_RS05625 39f8a3aa665908f1d96c20425a136c5d 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 1.6E-8 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS05625 39f8a3aa665908f1d96c20425a136c5d 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 217 1.6E-8 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS05625 39f8a3aa665908f1d96c20425a136c5d 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.6E-8 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS05625 39f8a3aa665908f1d96c20425a136c5d 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 1.6E-8 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS05625 39f8a3aa665908f1d96c20425a136c5d 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 196 1.6E-8 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS05625 39f8a3aa665908f1d96c20425a136c5d 309 Pfam PF00106 short chain dehydrogenase 16 217 6.9E-29 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 Pfam PF00873 AcrB/AcrD/AcrF family 1 1028 0.0 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 Gene3D G3DSA:3.30.70.1430 38 137 9.1E-33 T 05-07-2017 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 SUPERFAMILY SSF82693 571 673 1.74E-29 T 05-07-2017 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 Gene3D G3DSA:3.30.70.1430 573 673 2.3E-32 T 05-07-2017 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 5.9E-109 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 PRINTS PR00702 Acriflavin resistance protein family signature 625 639 5.9E-109 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 PRINTS PR00702 Acriflavin resistance protein family signature 558 575 5.9E-109 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 5.9E-109 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 5.9E-109 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 5.9E-109 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 5.9E-109 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 5.9E-109 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 5.9E-109 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 Gene3D G3DSA:1.10.3850.10 816 1028 5.8E-55 T 05-07-2017 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 SUPERFAMILY SSF82714 183 272 4.97E-19 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 SUPERFAMILY SSF82714 724 806 4.84E-19 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 SUPERFAMILY SSF82693 136 183 1.31E-24 T 05-07-2017 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 SUPERFAMILY SSF82693 275 331 1.31E-24 T 05-07-2017 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1045 0.0 T 05-07-2017 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 SUPERFAMILY SSF82693 674 723 5.75E-22 T 05-07-2017 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 SUPERFAMILY SSF82693 810 858 5.75E-22 T 05-07-2017 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 SUPERFAMILY SSF82866 835 1026 3.4E-42 T 05-07-2017 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 SUPERFAMILY SSF82693 38 131 2.09E-26 T 05-07-2017 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 Gene3D G3DSA:1.20.1640.10 295 502 1.6E-61 T 05-07-2017 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 SUPERFAMILY SSF82866 297 498 2.22E-52 T 05-07-2017 AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 Gene3D G3DSA:3.30.2090.10 182 276 1.9E-24 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS06045 7f41a17df07430d1f8942a769cd1e615 1049 Gene3D G3DSA:3.30.2090.10 724 812 1.9E-23 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS03870 1348e987a48f0cc3a24fe882cc0659a3 833 Gene3D G3DSA:3.40.50.300 16 217 2.6E-33 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS03870 1348e987a48f0cc3a24fe882cc0659a3 833 SUPERFAMILY SSF52540 244 385 1.41E-45 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS03870 1348e987a48f0cc3a24fe882cc0659a3 833 SUPERFAMILY SSF52540 33 216 1.41E-45 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS03870 1348e987a48f0cc3a24fe882cc0659a3 833 Gene3D G3DSA:3.40.50.300 263 389 3.9E-24 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS03870 1348e987a48f0cc3a24fe882cc0659a3 833 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 15 828 0.0 T 05-07-2017 IPR026362 DEXH box helicase, DNA ligase-associated AC028_RS03870 1348e987a48f0cc3a24fe882cc0659a3 833 SMART SM00490 293 375 3.6E-15 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS03870 1348e987a48f0cc3a24fe882cc0659a3 833 Pfam PF00271 Helicase conserved C-terminal domain 266 370 6.9E-12 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS03870 1348e987a48f0cc3a24fe882cc0659a3 833 SMART SM00487 22 244 5.6E-23 T 05-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_RS03870 1348e987a48f0cc3a24fe882cc0659a3 833 Pfam PF08494 DEAD/H associated 612 799 1.0E-48 T 05-07-2017 IPR013701 DEAD/H associated GO:0005524|GO:0016818 AC028_RS03870 1348e987a48f0cc3a24fe882cc0659a3 833 PIRSF PIRSF037307 6 831 1.8E-139 T 05-07-2017 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 AC028_RS03870 1348e987a48f0cc3a24fe882cc0659a3 833 Pfam PF00270 DEAD/DEAH box helicase 28 214 6.0E-24 T 05-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AC028_RS01730 53d6609c96cb3a6b4a8e7cfc16eb0327 102 Pfam PF01541 GIY-YIG catalytic domain 7 76 3.5E-12 T 05-07-2017 IPR000305 GIY-YIG nuclease superfamily AC028_RS01730 53d6609c96cb3a6b4a8e7cfc16eb0327 102 SUPERFAMILY SSF82771 6 77 2.09E-12 T 05-07-2017 IPR000305 GIY-YIG nuclease superfamily AC028_RS04820 a49ad29c17605c9f37c7f17b009633d3 435 Pfam PF00501 AMP-binding enzyme 115 285 1.2E-18 T 05-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AC028_RS04820 a49ad29c17605c9f37c7f17b009633d3 435 Gene3D G3DSA:3.40.50.980 120 280 1.8E-12 T 05-07-2017 AC028_RS04820 a49ad29c17605c9f37c7f17b009633d3 435 SUPERFAMILY SSF56801 9 431 1.57E-41 T 05-07-2017 AC028_RS04820 a49ad29c17605c9f37c7f17b009633d3 435 Gene3D G3DSA:3.30.300.30 336 427 1.2E-6 T 05-07-2017 AC028_RS02840 fd6eaa48547bc58e6de2d4b92d81ed2f 923 Gene3D G3DSA:2.170.130.10 48 158 4.7E-37 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS02840 fd6eaa48547bc58e6de2d4b92d81ed2f 923 Pfam PF00593 TonB dependent receptor 585 919 9.7E-32 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02840 fd6eaa48547bc58e6de2d4b92d81ed2f 923 SUPERFAMILY SSF56935 19 215 2.01E-101 T 05-07-2017 AC028_RS02840 fd6eaa48547bc58e6de2d4b92d81ed2f 923 SUPERFAMILY SSF56935 293 612 2.01E-101 T 05-07-2017 AC028_RS02840 fd6eaa48547bc58e6de2d4b92d81ed2f 923 SUPERFAMILY SSF56935 673 719 2.01E-101 T 05-07-2017 AC028_RS02840 fd6eaa48547bc58e6de2d4b92d81ed2f 923 SUPERFAMILY SSF56935 749 923 2.01E-101 T 05-07-2017 AC028_RS02840 fd6eaa48547bc58e6de2d4b92d81ed2f 923 Gene3D G3DSA:2.40.170.20 660 923 1.7E-87 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02840 fd6eaa48547bc58e6de2d4b92d81ed2f 923 Gene3D G3DSA:2.40.170.20 480 615 1.7E-87 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02840 fd6eaa48547bc58e6de2d4b92d81ed2f 923 Gene3D G3DSA:2.40.170.20 159 217 1.7E-87 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02840 fd6eaa48547bc58e6de2d4b92d81ed2f 923 Gene3D G3DSA:2.40.170.20 262 418 1.7E-87 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02840 fd6eaa48547bc58e6de2d4b92d81ed2f 923 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 155 5.4E-28 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS10625 71ba5f88708a29bc8e7408ed84e3b062 361 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 05-07-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AC028_RS10625 71ba5f88708a29bc8e7408ed84e3b062 361 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 361 8.9E-130 T 05-07-2017 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AC028_RS10625 71ba5f88708a29bc8e7408ed84e3b062 361 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 359 24.531 T 05-07-2017 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AC028_RS10625 71ba5f88708a29bc8e7408ed84e3b062 361 ProSitePatterns PS01348 MraY family signature 2. 190 201 - T 05-07-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AC028_RS10625 71ba5f88708a29bc8e7408ed84e3b062 361 Pfam PF00953 Glycosyl transferase family 4 99 285 1.9E-33 T 05-07-2017 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 AC028_RS18675 3a36d01f6cef46439a8167961057bd3d 408 SUPERFAMILY SSF47384 149 189 8.24E-6 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS18675 3a36d01f6cef46439a8167961057bd3d 408 Gene3D G3DSA:1.10.287.130 223 243 6.5E-5 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS18675 3a36d01f6cef46439a8167961057bd3d 408 Gene3D G3DSA:1.10.287.130 149 180 6.5E-5 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS18675 3a36d01f6cef46439a8167961057bd3d 408 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 300 404 4.4E-19 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS18675 3a36d01f6cef46439a8167961057bd3d 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 363 4.4E-19 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS18675 3a36d01f6cef46439a8167961057bd3d 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 384 4.4E-19 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS18675 3a36d01f6cef46439a8167961057bd3d 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 403 4.4E-19 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS18675 3a36d01f6cef46439a8167961057bd3d 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 349 4.4E-19 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS18675 3a36d01f6cef46439a8167961057bd3d 408 Gene3D G3DSA:3.30.565.10 244 406 2.2E-41 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS18675 3a36d01f6cef46439a8167961057bd3d 408 SMART SM00387 297 406 2.1E-27 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS18675 3a36d01f6cef46439a8167961057bd3d 408 SUPERFAMILY SSF55874 252 404 1.7E-41 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS18675 3a36d01f6cef46439a8167961057bd3d 408 Pfam PF00512 His Kinase A (phospho-acceptor) domain 155 253 3.4E-7 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 SUPERFAMILY SSF55785 23 136 5.23E-22 T 05-07-2017 IPR000014 PAS domain AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 SUPERFAMILY SSF55785 291 396 2.42E-12 T 05-07-2017 IPR000014 PAS domain AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 Gene3D G3DSA:3.30.450.20 24 141 3.8E-32 T 05-07-2017 AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 Pfam PF13426 PAS domain 325 386 0.11 T 05-07-2017 IPR000014 PAS domain AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 SMART SM00267 388 560 2.6E-57 T 05-07-2017 IPR000160 GGDEF domain AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 396 559 2.4E-39 T 05-07-2017 IPR000160 GGDEF domain AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 SMART SM00052 570 816 2.5E-106 T 05-07-2017 IPR001633 EAL domain AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 SUPERFAMILY SSF55785 133 261 5.58E-12 T 05-07-2017 IPR000014 PAS domain AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 Gene3D G3DSA:3.30.70.270 401 563 1.5E-53 T 05-07-2017 AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 SUPERFAMILY SSF55073 404 562 5.41E-47 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 Pfam PF08447 PAS fold 40 129 5.3E-23 T 05-07-2017 IPR013655 PAS fold-3 GO:0005515 AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 SMART SM00086 92 135 7.2E-8 T 05-07-2017 IPR001610 PAC motif AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 SMART SM00086 347 388 5.7E-4 T 05-07-2017 IPR001610 PAC motif AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 SMART SM00086 220 263 190.0 T 05-07-2017 IPR001610 PAC motif AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 Gene3D G3DSA:3.30.450.20 273 386 1.2E-13 T 05-07-2017 AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 Gene3D G3DSA:3.30.450.20 142 261 1.3E-14 T 05-07-2017 AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 SUPERFAMILY SSF141868 575 823 1.7E-83 T 05-07-2017 IPR001633 EAL domain AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 Pfam PF00563 EAL domain 577 811 2.5E-65 T 05-07-2017 IPR001633 EAL domain AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 Gene3D G3DSA:3.20.20.450 573 823 3.7E-91 T 05-07-2017 IPR001633 EAL domain AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 289 394 1.1E-6 T 05-07-2017 IPR000014 PAS domain AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 142 1.1E-11 T 05-07-2017 IPR000014 PAS domain AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 SMART SM00091 147 214 0.56 T 05-07-2017 IPR000014 PAS domain AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 SMART SM00091 17 85 1.2E-6 T 05-07-2017 IPR000014 PAS domain AC028_RS18690 a2fca5f75c448963da0527f4892dcdff 838 Pfam PF00990 Diguanylate cyclase, GGDEF domain 399 556 9.3E-46 T 05-07-2017 IPR000160 GGDEF domain AC028_RS06640 e49bbd4cf111582402d382efe7e9d32c 453 ProSitePatterns PS00216 Sugar transport proteins signature 1. 309 326 - T 05-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AC028_RS06640 e49bbd4cf111582402d382efe7e9d32c 453 SUPERFAMILY SSF103473 30 439 6.28E-54 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS06640 e49bbd4cf111582402d382efe7e9d32c 453 ProSitePatterns PS00217 Sugar transport proteins signature 2. 135 160 - T 05-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AC028_RS06640 e49bbd4cf111582402d382efe7e9d32c 453 Pfam PF00083 Sugar (and other) transporter 33 438 1.2E-32 T 05-07-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AC028_RS06640 e49bbd4cf111582402d382efe7e9d32c 453 Gene3D G3DSA:1.20.1250.20 32 225 4.4E-22 T 05-07-2017 AC028_RS06640 e49bbd4cf111582402d382efe7e9d32c 453 Gene3D G3DSA:1.20.1250.20 252 437 1.5E-13 T 05-07-2017 AC028_RS07505 eabbc89a436ecc40fd0a422a58cbf12d 121 SUPERFAMILY SSF54909 3 113 8.04E-24 T 05-07-2017 IPR011008 Dimeric alpha-beta barrel AC028_RS07505 eabbc89a436ecc40fd0a422a58cbf12d 121 Pfam PF05336 Domain of unknown function (DUF718) 5 112 7.8E-26 T 05-07-2017 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 AC028_RS17835 256abb23088439915f83dd70b37851be 528 SUPERFAMILY SSF56300 137 398 2.85E-31 T 05-07-2017 IPR029052 Metallo-dependent phosphatase-like AC028_RS17835 256abb23088439915f83dd70b37851be 528 Gene3D G3DSA:3.60.21.10 135 397 1.0E-25 T 05-07-2017 IPR029052 Metallo-dependent phosphatase-like AC028_RS17835 256abb23088439915f83dd70b37851be 528 Pfam PF16370 C terminal of Calcineurin-like phosphoesterase 348 514 2.2E-36 T 05-07-2017 IPR032288 Calcineurin-like phosphoesterase, C-terminal AC028_RS17835 256abb23088439915f83dd70b37851be 528 Pfam PF16371 N terminal of Calcineurin-like phosphoesterase 41 102 3.0E-10 T 05-07-2017 IPR032285 Calcineurin-like phosphoesterase, N-terminal AC028_RS17835 256abb23088439915f83dd70b37851be 528 Pfam PF00149 Calcineurin-like phosphoesterase 176 328 4.7E-6 T 05-07-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AC028_RS18600 9ad1d4d9af6271f263c4a328881e33b7 624 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 565 620 5.4E-12 T 05-07-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AC028_RS18600 9ad1d4d9af6271f263c4a328881e33b7 624 SUPERFAMILY SSF64518 137 441 1.57E-25 T 05-07-2017 AC028_RS18600 9ad1d4d9af6271f263c4a328881e33b7 624 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 3 334 5.1E-68 T 05-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AC028_RS18600 9ad1d4d9af6271f263c4a328881e33b7 624 Pfam PF00460 Flagella basal body rod protein 4 33 7.0E-9 T 05-07-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AC028_RS18600 9ad1d4d9af6271f263c4a328881e33b7 624 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 1.4E-18 T 05-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AC028_RS18600 9ad1d4d9af6271f263c4a328881e33b7 624 PRINTS PR01005 Flagellar hook-associated protein signature 353 375 1.4E-18 T 05-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AC028_RS18600 9ad1d4d9af6271f263c4a328881e33b7 624 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 1.4E-18 T 05-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AC028_RS18600 9ad1d4d9af6271f263c4a328881e33b7 624 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 1.4E-18 T 05-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AC028_RS18600 9ad1d4d9af6271f263c4a328881e33b7 624 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 1.4E-18 T 05-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AC028_RS18600 9ad1d4d9af6271f263c4a328881e33b7 624 PRINTS PR01005 Flagellar hook-associated protein signature 403 420 1.4E-18 T 05-07-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AC028_RS18600 9ad1d4d9af6271f263c4a328881e33b7 624 SUPERFAMILY SSF64518 430 621 1.96E-26 T 05-07-2017 AC028_RS02560 4ca06d071ce340142dfa7520fe16995c 99 Pfam PF01192 RNA polymerase Rpb6 8 60 7.6E-16 T 05-07-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AC028_RS02560 4ca06d071ce340142dfa7520fe16995c 99 SUPERFAMILY SSF63562 1 77 1.96E-24 T 05-07-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AC028_RS02560 4ca06d071ce340142dfa7520fe16995c 99 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 2.8E-20 T 05-07-2017 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS02560 4ca06d071ce340142dfa7520fe16995c 99 SMART SM01409 8 62 5.1E-16 T 05-07-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AC028_RS02560 4ca06d071ce340142dfa7520fe16995c 99 Gene3D G3DSA:3.90.940.10 1 77 8.4E-17 T 05-07-2017 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AC028_RS02560 4ca06d071ce340142dfa7520fe16995c 99 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 63 17.87 T 05-07-2017 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS06350 baaa5d37aee14e5596ac6bb99504bce0 253 Gene3D G3DSA:3.40.50.1820 1 251 1.4E-44 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS06350 baaa5d37aee14e5596ac6bb99504bce0 253 Pfam PF12697 Alpha/beta hydrolase family 12 244 1.7E-19 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS06350 baaa5d37aee14e5596ac6bb99504bce0 253 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 1 250 41.526 T 05-07-2017 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AC028_RS06350 baaa5d37aee14e5596ac6bb99504bce0 253 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 8 249 2.2E-88 T 05-07-2017 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 AC028_RS06350 baaa5d37aee14e5596ac6bb99504bce0 253 SUPERFAMILY SSF53474 2 249 1.27E-42 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS06270 7ed4173d48418a318bf54a5a5106a830 260 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 10 258 1.1E-103 T 05-07-2017 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 AC028_RS06270 7ed4173d48418a318bf54a5a5106a830 260 Gene3D G3DSA:3.40.50.1820 2 258 7.2E-56 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS06270 7ed4173d48418a318bf54a5a5106a830 260 SUPERFAMILY SSF53474 2 258 1.73E-59 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS06270 7ed4173d48418a318bf54a5a5106a830 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 204 218 2.9E-7 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS06270 7ed4173d48418a318bf54a5a5106a830 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 2.9E-7 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS06270 7ed4173d48418a318bf54a5a5106a830 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 2.9E-7 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS06270 7ed4173d48418a318bf54a5a5106a830 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 2.9E-7 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS06270 7ed4173d48418a318bf54a5a5106a830 260 Pfam PF00561 alpha/beta hydrolase fold 22 132 9.6E-14 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS16370 122eb5d7727c7931ec1f3e0ddd29e5a1 78 Pfam PF04102 SlyX 12 78 5.5E-16 T 05-07-2017 IPR007236 SlyX AC028_RS16370 122eb5d7727c7931ec1f3e0ddd29e5a1 78 Gene3D G3DSA:1.20.5.300 1 58 7.1E-20 T 05-07-2017 AC028_RS16370 122eb5d7727c7931ec1f3e0ddd29e5a1 78 Hamap MF_00715 Protein SlyX [slyX]. 11 78 15.699 T 05-07-2017 IPR007236 SlyX AC028_RS03030 83d59ae7ba2ecb393e765f1ffda09922 533 Gene3D G3DSA:2.60.120.260 363 531 6.3E-66 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS03030 83d59ae7ba2ecb393e765f1ffda09922 533 SUPERFAMILY SSF74650 26 271 1.35E-82 T 05-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AC028_RS03030 83d59ae7ba2ecb393e765f1ffda09922 533 Pfam PF14683 Polysaccharide lyase family 4, domain III 367 530 1.1E-33 T 05-07-2017 IPR029411 Rhamnogalacturonan lyase, domain III AC028_RS03030 83d59ae7ba2ecb393e765f1ffda09922 533 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 98 - T 05-07-2017 IPR010916 TonB box, conserved site AC028_RS03030 83d59ae7ba2ecb393e765f1ffda09922 533 Pfam PF09284 Rhamnogalacturonan lyase B, N-terminal 27 274 1.3E-88 T 05-07-2017 IPR015364 Rhamnogalacturonase B, N-terminal GO:0005975|GO:0016837|GO:0030246 MetaCyc: PWY-6769|MetaCyc: PWY-6771 AC028_RS03030 83d59ae7ba2ecb393e765f1ffda09922 533 SUPERFAMILY SSF49785 363 531 7.23E-55 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS03030 83d59ae7ba2ecb393e765f1ffda09922 533 Gene3D G3DSA:2.70.98.10 26 275 4.1E-108 T 05-07-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 AC028_RS03030 83d59ae7ba2ecb393e765f1ffda09922 533 SUPERFAMILY SSF49452 275 354 2.35E-12 T 05-07-2017 IPR013784 Carbohydrate-binding-like fold GO:0030246 AC028_RS03030 83d59ae7ba2ecb393e765f1ffda09922 533 PIRSF PIRSF011794 3 532 6.5E-229 T 05-07-2017 IPR016590 Rhamnogalacturonase B GO:0005975|GO:0016837 MetaCyc: PWY-6769|MetaCyc: PWY-6771 AC028_RS03030 83d59ae7ba2ecb393e765f1ffda09922 533 Gene3D G3DSA:2.60.40.1120 277 358 1.4E-29 T 05-07-2017 IPR014766 Carboxypeptidase, regulatory domain AC028_RS03030 83d59ae7ba2ecb393e765f1ffda09922 533 Pfam PF14686 Polysaccharide lyase family 4, domain II 287 352 2.5E-15 T 05-07-2017 IPR029413 Rhamnogalacturonan lyase, domain II AC028_RS11755 6c41adadd24d2bdeb4003276a68674fa 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 95 119 - T 05-07-2017 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11755 6c41adadd24d2bdeb4003276a68674fa 208 SMART SM00363 97 161 1.5E-16 T 05-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AC028_RS11755 6c41adadd24d2bdeb4003276a68674fa 208 Gene3D G3DSA:1.10.1050.10 1 102 2.0E-42 T 05-07-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AC028_RS11755 6c41adadd24d2bdeb4003276a68674fa 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 96 1.3E-30 T 05-07-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AC028_RS11755 6c41adadd24d2bdeb4003276a68674fa 208 SUPERFAMILY SSF55174 2 208 6.15E-65 T 05-07-2017 AC028_RS11755 6c41adadd24d2bdeb4003276a68674fa 208 Pfam PF01479 S4 domain 98 144 6.0E-18 T 05-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AC028_RS11755 6c41adadd24d2bdeb4003276a68674fa 208 SMART SM01390 3 96 6.4E-48 T 05-07-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AC028_RS11755 6c41adadd24d2bdeb4003276a68674fa 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 34.661 T 05-07-2017 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AC028_RS11755 6c41adadd24d2bdeb4003276a68674fa 208 Gene3D G3DSA:3.10.290.10 103 192 9.4E-29 T 05-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AC028_RS11755 6c41adadd24d2bdeb4003276a68674fa 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 4.6E-77 T 05-07-2017 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AC028_RS04035 8bd32856b032508c18640c0088cb5d36 112 PIRSF PIRSF039144 1 112 7.0E-52 T 05-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AC028_RS04035 8bd32856b032508c18640c0088cb5d36 112 Gene3D G3DSA:3.30.70.120 1 112 4.8E-48 T 05-07-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AC028_RS04035 8bd32856b032508c18640c0088cb5d36 112 PRINTS PR00340 P-II protein signature 23 41 1.3E-41 T 05-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AC028_RS04035 8bd32856b032508c18640c0088cb5d36 112 PRINTS PR00340 P-II protein signature 83 103 1.3E-41 T 05-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AC028_RS04035 8bd32856b032508c18640c0088cb5d36 112 PRINTS PR00340 P-II protein signature 52 75 1.3E-41 T 05-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AC028_RS04035 8bd32856b032508c18640c0088cb5d36 112 PRINTS PR00340 P-II protein signature 2 17 1.3E-41 T 05-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AC028_RS04035 8bd32856b032508c18640c0088cb5d36 112 SUPERFAMILY SSF54913 1 112 1.94E-44 T 05-07-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta AC028_RS04035 8bd32856b032508c18640c0088cb5d36 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 05-07-2017 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AC028_RS04035 8bd32856b032508c18640c0088cb5d36 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 05-07-2017 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AC028_RS04035 8bd32856b032508c18640c0088cb5d36 112 SMART SM00938 4 105 7.3E-63 T 05-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AC028_RS04035 8bd32856b032508c18640c0088cb5d36 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.2E-41 T 05-07-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AC028_RS04965 6115428fbf16165f427ea297a1b481ad 175 Pfam PF08281 Sigma-70, region 4 111 163 8.6E-16 T 05-07-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS04965 6115428fbf16165f427ea297a1b481ad 175 Gene3D G3DSA:1.10.10.10 106 170 1.4E-16 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS04965 6115428fbf16165f427ea297a1b481ad 175 SUPERFAMILY SSF88659 97 171 4.58E-16 T 05-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS04965 6115428fbf16165f427ea297a1b481ad 175 Pfam PF04542 Sigma-70 region 2 12 78 1.3E-11 T 05-07-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS04965 6115428fbf16165f427ea297a1b481ad 175 Gene3D G3DSA:1.10.1740.10 6 90 9.1E-15 T 05-07-2017 AC028_RS04965 6115428fbf16165f427ea297a1b481ad 175 SUPERFAMILY SSF88946 5 92 1.94E-17 T 05-07-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS04965 6115428fbf16165f427ea297a1b481ad 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 167 9.7E-28 T 05-07-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS21235 a79cb5ec92e104e965432e266282d0af 398 SUPERFAMILY SSF53756 80 371 6.28E-12 T 05-07-2017 AC028_RS11510 ac979df8725d4e13d6a5bece09506239 562 SMART SM00028 381 414 310.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS11510 ac979df8725d4e13d6a5bece09506239 562 SMART SM00028 177 210 91.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS11510 ac979df8725d4e13d6a5bece09506239 562 SMART SM00028 449 483 140.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS11510 ac979df8725d4e13d6a5bece09506239 562 SMART SM00028 517 550 1.5 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS11510 ac979df8725d4e13d6a5bece09506239 562 SMART SM00028 415 448 6.8 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS11510 ac979df8725d4e13d6a5bece09506239 562 SUPERFAMILY SSF48452 382 551 1.18E-26 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS11510 ac979df8725d4e13d6a5bece09506239 562 Gene3D G3DSA:1.25.40.10 326 551 9.2E-35 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS11510 ac979df8725d4e13d6a5bece09506239 562 Gene3D G3DSA:1.25.40.10 39 104 8.3E-13 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS11510 ac979df8725d4e13d6a5bece09506239 562 Gene3D G3DSA:1.25.40.10 174 325 8.3E-13 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS11510 ac979df8725d4e13d6a5bece09506239 562 SUPERFAMILY SSF48452 169 364 1.61E-11 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS11510 ac979df8725d4e13d6a5bece09506239 562 Pfam PF13429 Tetratricopeptide repeat 276 539 1.1E-7 T 05-07-2017 AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 Gene3D G3DSA:1.10.287.130 568 629 5.1E-7 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 Gene3D G3DSA:3.30.450.20 402 556 1.9E-17 T 05-07-2017 AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 SMART SM00086 370 412 3.4 T 05-07-2017 IPR001610 PAC motif AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 SMART SM00086 241 284 61.0 T 05-07-2017 IPR001610 PAC motif AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 SMART SM00086 493 535 2.1E-6 T 05-07-2017 IPR001610 PAC motif AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 SUPERFAMILY SSF55785 50 160 6.46E-8 T 05-07-2017 IPR000014 PAS domain AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 Pfam PF08448 PAS fold 61 154 2.6E-6 T 05-07-2017 IPR013656 PAS fold-4 AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 Pfam PF08448 PAS fold 171 284 1.6E-7 T 05-07-2017 IPR013656 PAS fold-4 AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 PRINTS PR00344 Bacterial sensor protein C-terminal signature 753 763 1.8E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 PRINTS PR00344 Bacterial sensor protein C-terminal signature 735 749 1.8E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 PRINTS PR00344 Bacterial sensor protein C-terminal signature 766 784 1.8E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 PRINTS PR00344 Bacterial sensor protein C-terminal signature 790 803 1.8E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 SMART SM00091 37 102 53.0 T 05-07-2017 IPR000014 PAS domain AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 SMART SM00091 296 363 1.8E-9 T 05-07-2017 IPR000014 PAS domain AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 SMART SM00091 165 230 0.0021 T 05-07-2017 IPR000014 PAS domain AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 Pfam PF08447 PAS fold 465 528 1.8E-10 T 05-07-2017 IPR013655 PAS fold-3 GO:0005515 AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 Gene3D G3DSA:3.30.450.20 46 159 3.4E-9 T 05-07-2017 AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 SUPERFAMILY SSF55874 634 804 7.33E-37 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 Pfam PF00989 PAS fold 299 409 1.2E-13 T 05-07-2017 IPR013767 PAS fold GO:0006355 AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 SMART SM00448 829 942 4.9E-21 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 685 803 1.3E-16 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 Gene3D G3DSA:3.30.450.20 160 282 5.7E-15 T 05-07-2017 AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 Pfam PF00512 His Kinase A (phospho-acceptor) domain 576 641 1.3E-10 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 SUPERFAMILY SSF55785 150 282 4.35E-12 T 05-07-2017 IPR000014 PAS domain AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 292 419 7.2E-18 T 05-07-2017 IPR000014 PAS domain AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 SMART SM00388 575 643 6.3E-8 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 SUPERFAMILY SSF55785 465 544 7.57E-13 T 05-07-2017 IPR000014 PAS domain AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 SMART SM00387 684 806 3.1E-25 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 Gene3D G3DSA:3.40.50.2300 827 949 1.3E-31 T 05-07-2017 AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 Pfam PF00072 Response regulator receiver domain 831 942 1.8E-15 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 SUPERFAMILY SSF55785 280 407 2.26E-24 T 05-07-2017 IPR000014 PAS domain AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 Gene3D G3DSA:3.30.450.20 283 401 1.1E-25 T 05-07-2017 AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 Gene3D G3DSA:3.30.565.10 630 804 1.1E-34 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 SUPERFAMILY SSF47384 563 640 3.14E-11 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS17005 f1d6dcd37bcfb02223bf2f7122343cf3 951 SUPERFAMILY SSF52172 828 949 2.7E-24 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS00900 44fdee8a0f8d5fdb37c55e689f9e3f0c 214 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 14 211 9.2E-64 T 05-07-2017 IPR005744 Hly-III GO:0016021|GO:0019835 AC028_RS00900 44fdee8a0f8d5fdb37c55e689f9e3f0c 214 Pfam PF03006 Haemolysin-III related 12 206 1.3E-36 T 05-07-2017 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 AC028_RS06250 6ac00e306a553ddd67c645c864bf479c 402 SUPERFAMILY SSF53901 278 401 4.71E-42 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS06250 6ac00e306a553ddd67c645c864bf479c 402 PIRSF PIRSF000429 1 402 1.4E-129 T 05-07-2017 IPR002155 Thiolase GO:0008152|GO:0016747 AC028_RS06250 6ac00e306a553ddd67c645c864bf479c 402 Pfam PF02803 Thiolase, C-terminal domain 278 401 3.9E-41 T 05-07-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AC028_RS06250 6ac00e306a553ddd67c645c864bf479c 402 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 05-07-2017 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AC028_RS06250 6ac00e306a553ddd67c645c864bf479c 402 SUPERFAMILY SSF53901 3 277 8.65E-79 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS06250 6ac00e306a553ddd67c645c864bf479c 402 Pfam PF00108 Thiolase, N-terminal domain 4 269 2.1E-79 T 05-07-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AC028_RS06250 6ac00e306a553ddd67c645c864bf479c 402 Gene3D G3DSA:3.40.47.10 200 283 5.3E-68 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS06250 6ac00e306a553ddd67c645c864bf479c 402 Gene3D G3DSA:3.40.47.10 3 125 5.3E-68 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS06250 6ac00e306a553ddd67c645c864bf479c 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 400 3.6E-137 T 05-07-2017 IPR002155 Thiolase GO:0008152|GO:0016747 AC028_RS06250 6ac00e306a553ddd67c645c864bf479c 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 05-07-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AC028_RS06250 6ac00e306a553ddd67c645c864bf479c 402 ProSitePatterns PS00737 Thiolases signature 2. 348 364 - T 05-07-2017 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AC028_RS06250 6ac00e306a553ddd67c645c864bf479c 402 Gene3D G3DSA:3.40.47.10 151 199 2.0E-58 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS06250 6ac00e306a553ddd67c645c864bf479c 402 Gene3D G3DSA:3.40.47.10 284 401 2.0E-58 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS06250 6ac00e306a553ddd67c645c864bf479c 402 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 2 402 6.3E-217 T 05-07-2017 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 AC028_RS06740 9cfc1412af636666ed3fe66314f69c03 189 Gene3D G3DSA:1.10.357.10 3 184 3.2E-33 T 05-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AC028_RS06740 9cfc1412af636666ed3fe66314f69c03 189 SUPERFAMILY SSF48498 79 184 2.71E-21 T 05-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AC028_RS06740 9cfc1412af636666ed3fe66314f69c03 189 SUPERFAMILY SSF46689 4 83 5.13E-15 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS06740 9cfc1412af636666ed3fe66314f69c03 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.2E-7 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS06740 9cfc1412af636666ed3fe66314f69c03 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.2E-7 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS06740 9cfc1412af636666ed3fe66314f69c03 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 1.9E-14 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS10135 f7be9f730a6445f2168be3af0df51ba9 603 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 592 5.6E-19 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS10135 f7be9f730a6445f2168be3af0df51ba9 603 Gene3D G3DSA:3.30.450.20 212 339 2.5E-11 T 05-07-2017 AC028_RS10135 f7be9f730a6445f2168be3af0df51ba9 603 SMART SM00387 481 594 9.8E-28 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS10135 f7be9f730a6445f2168be3af0df51ba9 603 Gene3D G3DSA:1.10.287.130 359 432 1.8E-13 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS10135 f7be9f730a6445f2168be3af0df51ba9 603 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 228 346 8.2E-7 T 05-07-2017 IPR000014 PAS domain AC028_RS10135 f7be9f730a6445f2168be3af0df51ba9 603 Pfam PF13188 PAS domain 225 270 2.8E-6 T 05-07-2017 IPR000014 PAS domain AC028_RS10135 f7be9f730a6445f2168be3af0df51ba9 603 SUPERFAMILY SSF47384 353 436 7.85E-18 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS10135 f7be9f730a6445f2168be3af0df51ba9 603 Pfam PF05227 CHASE3 domain 43 175 4.3E-18 T 05-07-2017 IPR007891 CHASE3 AC028_RS10135 f7be9f730a6445f2168be3af0df51ba9 603 SUPERFAMILY SSF55785 209 339 1.92E-13 T 05-07-2017 IPR000014 PAS domain AC028_RS10135 f7be9f730a6445f2168be3af0df51ba9 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 572 3.2E-9 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS10135 f7be9f730a6445f2168be3af0df51ba9 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 535 3.2E-9 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS10135 f7be9f730a6445f2168be3af0df51ba9 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 591 3.2E-9 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS10135 f7be9f730a6445f2168be3af0df51ba9 603 SUPERFAMILY SSF55874 425 592 2.36E-34 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS10135 f7be9f730a6445f2168be3af0df51ba9 603 SMART SM00388 368 436 6.9E-10 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS10135 f7be9f730a6445f2168be3af0df51ba9 603 Pfam PF00512 His Kinase A (phospho-acceptor) domain 370 436 3.2E-11 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS10135 f7be9f730a6445f2168be3af0df51ba9 603 Gene3D G3DSA:3.30.565.10 437 598 1.3E-33 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS16875 8bf32677a15cf8ef5dd48fd1f6d4e474 513 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 4 504 45.063 T 05-07-2017 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AC028_RS16875 8bf32677a15cf8ef5dd48fd1f6d4e474 513 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 503 1.1E-204 T 05-07-2017 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AC028_RS16875 8bf32677a15cf8ef5dd48fd1f6d4e474 513 Gene3D G3DSA:1.20.200.10 198 502 1.0E-123 T 05-07-2017 AC028_RS16875 8bf32677a15cf8ef5dd48fd1f6d4e474 513 Gene3D G3DSA:1.10.275.10 4 197 3.9E-69 T 05-07-2017 IPR024083 Fumarase/histidase, N-terminal AC028_RS16875 8bf32677a15cf8ef5dd48fd1f6d4e474 513 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 05-07-2017 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 AC028_RS16875 8bf32677a15cf8ef5dd48fd1f6d4e474 513 Pfam PF00221 Aromatic amino acid lyase 13 470 1.1E-180 T 05-07-2017 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AC028_RS16875 8bf32677a15cf8ef5dd48fd1f6d4e474 513 SUPERFAMILY SSF48557 5 499 6.75E-185 T 05-07-2017 IPR008948 L-Aspartase-like GO:0003824 AC028_RS00995 744267c05dd924a52e2b1a6c92c6e82e 111 SUPERFAMILY SSF103481 11 109 2.35E-6 T 05-07-2017 AC028_RS00995 744267c05dd924a52e2b1a6c92c6e82e 111 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 5 109 24.546 T 05-07-2017 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 AC028_RS00995 744267c05dd924a52e2b1a6c92c6e82e 111 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 7 109 2.0E-40 T 05-07-2017 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 AC028_RS21620 250f9099aff35e8d33ffc332e378ad2e 184 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 144 160 - T 05-07-2017 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21620 250f9099aff35e8d33ffc332e378ad2e 184 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 177 41.238 T 05-07-2017 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21620 250f9099aff35e8d33ffc332e378ad2e 184 Gene3D G3DSA:3.40.50.700 47 175 1.7E-32 T 05-07-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21620 250f9099aff35e8d33ffc332e378ad2e 184 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 38 177 2.2E-76 T 05-07-2017 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21620 250f9099aff35e8d33ffc332e378ad2e 184 SUPERFAMILY SSF56770 35 179 8.11E-66 T 05-07-2017 AC028_RS21620 250f9099aff35e8d33ffc332e378ad2e 184 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 63 172 4.9E-23 T 05-07-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS09730 82cebc6ef61c70c14099c7091308e614 250 SUPERFAMILY SSF46946 116 209 8.98E-18 T 05-07-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AC028_RS09730 82cebc6ef61c70c14099c7091308e614 250 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 141 187 6.6E-11 T 05-07-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AC028_RS09730 82cebc6ef61c70c14099c7091308e614 250 SUPERFAMILY SSF81624 2 120 1.16E-11 T 05-07-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AC028_RS09730 82cebc6ef61c70c14099c7091308e614 250 SMART SM00898 2 99 7.0E-7 T 05-07-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AC028_RS09730 82cebc6ef61c70c14099c7091308e614 250 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 96 7.4E-8 T 05-07-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AC028_RS09730 82cebc6ef61c70c14099c7091308e614 250 Gene3D G3DSA:1.10.8.50 116 243 1.6E-21 T 05-07-2017 AC028_RS09730 82cebc6ef61c70c14099c7091308e614 250 SMART SM01232 113 196 9.7E-11 T 05-07-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AC028_RS09730 82cebc6ef61c70c14099c7091308e614 250 Gene3D G3DSA:3.20.190.10 2 95 3.7E-6 T 05-07-2017 AC028_RS00845 1775e56a3bb16be16d1328a224fafbd6 187 Pfam PF01292 Prokaryotic cytochrome b561 8 179 7.4E-32 T 05-07-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AC028_RS00845 1775e56a3bb16be16d1328a224fafbd6 187 SUPERFAMILY SSF81342 3 179 1.57E-36 T 05-07-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AC028_RS00845 1775e56a3bb16be16d1328a224fafbd6 187 Gene3D G3DSA:1.20.950.20 2 67 5.4E-4 T 05-07-2017 AC028_RS03655 89935d7dd9a43097963a76ad5d29e6fa 416 Pfam PF01593 Flavin containing amine oxidoreductase 13 266 3.7E-16 T 05-07-2017 IPR002937 Amine oxidase GO:0016491|GO:0055114 AC028_RS03655 89935d7dd9a43097963a76ad5d29e6fa 416 SUPERFAMILY SSF51905 6 301 2.59E-50 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS03655 89935d7dd9a43097963a76ad5d29e6fa 416 SUPERFAMILY SSF51905 381 411 2.59E-50 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS03655 89935d7dd9a43097963a76ad5d29e6fa 416 Gene3D G3DSA:3.50.50.60 202 282 6.6E-28 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS03655 89935d7dd9a43097963a76ad5d29e6fa 416 Gene3D G3DSA:3.50.50.60 151 152 6.6E-28 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS03655 89935d7dd9a43097963a76ad5d29e6fa 416 Gene3D G3DSA:3.50.50.60 6 96 6.6E-28 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS06800 02366d455470a07ab6013e0954240ddf 1350 Gene3D G3DSA:1.10.3170.10 203 406 3.3E-20 T 05-07-2017 AC028_RS06800 02366d455470a07ab6013e0954240ddf 1350 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 6 1308 18.784 T 05-07-2017 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AC028_RS06800 02366d455470a07ab6013e0954240ddf 1350 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1015 1199 2.1E-5 T 05-07-2017 AC028_RS06800 02366d455470a07ab6013e0954240ddf 1350 Gene3D G3DSA:3.40.50.300 515 652 3.8E-52 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06800 02366d455470a07ab6013e0954240ddf 1350 Gene3D G3DSA:3.40.50.300 798 953 3.8E-52 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06800 02366d455470a07ab6013e0954240ddf 1350 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 11 1228 3.9E-213 T 05-07-2017 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AC028_RS06800 02366d455470a07ab6013e0954240ddf 1350 Gene3D G3DSA:1.10.486.10 655 797 3.2E-39 T 05-07-2017 AC028_RS06800 02366d455470a07ab6013e0954240ddf 1350 Pfam PF00580 UvrD/REP helicase N-terminal domain 15 498 1.5E-48 T 05-07-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AC028_RS06800 02366d455470a07ab6013e0954240ddf 1350 Gene3D G3DSA:3.90.320.10 1284 1312 3.5E-83 T 05-07-2017 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 AC028_RS06800 02366d455470a07ab6013e0954240ddf 1350 Gene3D G3DSA:3.90.320.10 954 1228 3.5E-83 T 05-07-2017 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 AC028_RS06800 02366d455470a07ab6013e0954240ddf 1350 Gene3D G3DSA:3.40.50.300 14 74 3.5E-45 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06800 02366d455470a07ab6013e0954240ddf 1350 Gene3D G3DSA:3.40.50.300 409 514 3.5E-45 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06800 02366d455470a07ab6013e0954240ddf 1350 Gene3D G3DSA:3.40.50.300 166 196 3.5E-45 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06800 02366d455470a07ab6013e0954240ddf 1350 SUPERFAMILY SSF52540 873 895 1.25E-93 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06800 02366d455470a07ab6013e0954240ddf 1350 SUPERFAMILY SSF52540 383 535 1.25E-93 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06800 02366d455470a07ab6013e0954240ddf 1350 SUPERFAMILY SSF52540 164 230 1.25E-93 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06800 02366d455470a07ab6013e0954240ddf 1350 SUPERFAMILY SSF52540 571 830 1.25E-93 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06800 02366d455470a07ab6013e0954240ddf 1350 SUPERFAMILY SSF52540 14 72 1.25E-93 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06800 02366d455470a07ab6013e0954240ddf 1350 SUPERFAMILY SSF52980 960 1229 1.23E-51 T 05-07-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AC028_RS06800 02366d455470a07ab6013e0954240ddf 1350 Pfam PF13361 UvrD-like helicase C-terminal domain 713 894 2.0E-14 T 05-07-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AC028_RS06800 02366d455470a07ab6013e0954240ddf 1350 Pfam PF13361 UvrD-like helicase C-terminal domain 623 685 1.0E-6 T 05-07-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AC028_RS16360 473060fb8037fa8d5e3f6aeb7f2135e6 300 Gene3D G3DSA:3.10.50.40 181 298 1.7E-48 T 05-07-2017 AC028_RS16360 473060fb8037fa8d5e3f6aeb7f2135e6 300 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 108 200 4.6E-20 T 05-07-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AC028_RS16360 473060fb8037fa8d5e3f6aeb7f2135e6 300 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 17 90 4.5E-9 T 05-07-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AC028_RS16360 473060fb8037fa8d5e3f6aeb7f2135e6 300 SUPERFAMILY SSF54534 134 299 3.14E-50 T 05-07-2017 AC028_RS16360 473060fb8037fa8d5e3f6aeb7f2135e6 300 Gene3D G3DSA:1.10.287.460 103 180 6.3E-18 T 05-07-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AC028_RS16360 473060fb8037fa8d5e3f6aeb7f2135e6 300 Gene3D G3DSA:1.10.287.460 21 86 5.5E-20 T 05-07-2017 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AC028_RS16360 473060fb8037fa8d5e3f6aeb7f2135e6 300 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 209 295 1.4E-25 T 05-07-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 AC028_RS19845 21996273f3d66347950a73adf83340f7 552 SUPERFAMILY SSF55174 26 114 2.94E-16 T 05-07-2017 AC028_RS19845 21996273f3d66347950a73adf83340f7 552 Pfam PF01479 S4 domain 28 73 2.7E-9 T 05-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AC028_RS19845 21996273f3d66347950a73adf83340f7 552 Pfam PF00849 RNA pseudouridylate synthase 91 226 8.5E-16 T 05-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS19845 21996273f3d66347950a73adf83340f7 552 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 95 255 4.2E-49 T 05-07-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AC028_RS19845 21996273f3d66347950a73adf83340f7 552 SMART SM00363 28 86 8.9E-10 T 05-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AC028_RS19845 21996273f3d66347950a73adf83340f7 552 SUPERFAMILY SSF55120 87 259 5.76E-36 T 05-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS19845 21996273f3d66347950a73adf83340f7 552 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 129 143 - T 05-07-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AC028_RS19845 21996273f3d66347950a73adf83340f7 552 Gene3D G3DSA:3.10.290.10 28 80 5.8E-15 T 05-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AC028_RS08245 608310f79417c7b6609ba89c55fd07cd 737 Pfam PF13515 Fusaric acid resistance protein-like 414 534 1.1E-21 T 05-07-2017 AC028_RS08245 608310f79417c7b6609ba89c55fd07cd 737 Pfam PF12805 FUSC-like inner membrane protein yccS 71 357 9.7E-102 T 05-07-2017 IPR032692 Integral membrane protein YccS, N-terminal AC028_RS08245 608310f79417c7b6609ba89c55fd07cd 737 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 716 6.2E-229 T 05-07-2017 IPR010020 Integral membrane protein, YccS/YhfK AC028_RS08245 608310f79417c7b6609ba89c55fd07cd 737 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 13 716 1.9E-208 T 05-07-2017 IPR010019 Integral membrane protein, YccS AC028_RS15660 56c66c68fd2bd7bcca83af329a2c492b 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 2.7E-100 T 05-07-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AC028_RS15660 56c66c68fd2bd7bcca83af329a2c492b 505 Pfam PF05683 Fumarase C-terminus 289 488 1.8E-79 T 05-07-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AC028_RS15660 56c66c68fd2bd7bcca83af329a2c492b 505 SUPERFAMILY SSF117457 316 487 8.37E-63 T 05-07-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AC028_RS15660 56c66c68fd2bd7bcca83af329a2c492b 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 487 7.0E-49 T 05-07-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AC028_RS15660 56c66c68fd2bd7bcca83af329a2c492b 505 Gene3D G3DSA:3.20.130.10 310 487 7.9E-72 T 05-07-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AC028_RS15660 56c66c68fd2bd7bcca83af329a2c492b 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 285 6.0E-63 T 05-07-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AC028_RS15660 56c66c68fd2bd7bcca83af329a2c492b 505 PIRSF PIRSF001394 1 505 4.1E-220 T 05-07-2017 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 AC028_RS17950 595fa2370d9d251828e4f9beb3643ee9 400 Gene3D G3DSA:3.40.640.10 58 272 1.1E-76 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS17950 595fa2370d9d251828e4f9beb3643ee9 400 SUPERFAMILY SSF53383 3 390 2.82E-106 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS17950 595fa2370d9d251828e4f9beb3643ee9 400 Gene3D G3DSA:3.90.1150.10 273 389 1.0E-10 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS17950 595fa2370d9d251828e4f9beb3643ee9 400 Pfam PF00155 Aminotransferase class I and II 44 381 2.8E-31 T 05-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AC028_RS18360 ce636096f9f9a2453ea7bf84678e088b 695 SMART SM00052 432 678 1.6E-119 T 05-07-2017 IPR001633 EAL domain AC028_RS18360 ce636096f9f9a2453ea7bf84678e088b 695 Pfam PF00563 EAL domain 438 673 9.2E-77 T 05-07-2017 IPR001633 EAL domain AC028_RS18360 ce636096f9f9a2453ea7bf84678e088b 695 Gene3D G3DSA:3.30.70.270 264 428 2.7E-54 T 05-07-2017 AC028_RS18360 ce636096f9f9a2453ea7bf84678e088b 695 SUPERFAMILY SSF141868 438 683 3.92E-91 T 05-07-2017 IPR001633 EAL domain AC028_RS18360 ce636096f9f9a2453ea7bf84678e088b 695 Gene3D G3DSA:3.20.20.450 435 683 7.2E-101 T 05-07-2017 IPR001633 EAL domain AC028_RS18360 ce636096f9f9a2453ea7bf84678e088b 695 SUPERFAMILY SSF55073 267 423 6.59E-47 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS18360 ce636096f9f9a2453ea7bf84678e088b 695 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 260 421 1.5E-37 T 05-07-2017 IPR000160 GGDEF domain AC028_RS18360 ce636096f9f9a2453ea7bf84678e088b 695 SMART SM00267 251 422 1.6E-56 T 05-07-2017 IPR000160 GGDEF domain AC028_RS18360 ce636096f9f9a2453ea7bf84678e088b 695 Pfam PF03707 Bacterial signalling protein N terminal repeat 180 239 9.7E-9 T 05-07-2017 IPR005330 MHYT domain AC028_RS18360 ce636096f9f9a2453ea7bf84678e088b 695 Pfam PF03707 Bacterial signalling protein N terminal repeat 51 106 5.6E-20 T 05-07-2017 IPR005330 MHYT domain AC028_RS18360 ce636096f9f9a2453ea7bf84678e088b 695 Pfam PF03707 Bacterial signalling protein N terminal repeat 114 166 1.2E-15 T 05-07-2017 IPR005330 MHYT domain AC028_RS18360 ce636096f9f9a2453ea7bf84678e088b 695 Pfam PF00990 Diguanylate cyclase, GGDEF domain 263 418 2.5E-43 T 05-07-2017 IPR000160 GGDEF domain AC028_RS09840 bade32bb682b0364f3a74bb88ef80267 189 ProSitePatterns PS00213 Lipocalin signature. 33 44 - T 05-07-2017 IPR022272 Lipocalin family conserved site AC028_RS09840 bade32bb682b0364f3a74bb88ef80267 189 Pfam PF08212 Lipocalin-like domain 32 173 1.4E-39 T 05-07-2017 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AC028_RS09840 bade32bb682b0364f3a74bb88ef80267 189 SUPERFAMILY SSF50814 13 176 1.13E-28 T 05-07-2017 IPR011038 Calycin-like AC028_RS09840 bade32bb682b0364f3a74bb88ef80267 189 Gene3D G3DSA:2.40.128.20 3 173 5.4E-33 T 05-07-2017 IPR012674 Calycin AC028_RS09840 bade32bb682b0364f3a74bb88ef80267 189 PIRSF PIRSF036893 1 185 2.9E-44 T 05-07-2017 IPR022271 Lipocalin, ApoD type AC028_RS12955 8ac88e9f01bb47e04fc67fb8d2274d53 301 SUPERFAMILY SSF54637 120 287 4.6E-54 T 05-07-2017 IPR029069 HotDog domain AC028_RS12955 8ac88e9f01bb47e04fc67fb8d2274d53 301 Pfam PF13622 Thioesterase-like superfamily 31 286 4.7E-60 T 05-07-2017 AC028_RS12955 8ac88e9f01bb47e04fc67fb8d2274d53 301 Gene3D G3DSA:3.10.129.10 128 288 2.8E-55 T 05-07-2017 IPR029069 HotDog domain AC028_RS12955 8ac88e9f01bb47e04fc67fb8d2274d53 301 SUPERFAMILY SSF54637 8 118 3.54E-39 T 05-07-2017 IPR029069 HotDog domain AC028_RS12955 8ac88e9f01bb47e04fc67fb8d2274d53 301 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 16 287 1.9E-89 T 05-07-2017 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-75105 AC028_RS12955 8ac88e9f01bb47e04fc67fb8d2274d53 301 Gene3D G3DSA:3.10.129.10 9 119 1.6E-46 T 05-07-2017 IPR029069 HotDog domain AC028_RS05310 def2088e79043c0e39ae3dc3a4471e0e 329 SUPERFAMILY SSF53474 41 184 3.71E-37 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS05310 def2088e79043c0e39ae3dc3a4471e0e 329 SUPERFAMILY SSF53474 259 321 3.71E-37 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS05310 def2088e79043c0e39ae3dc3a4471e0e 329 PIRSF PIRSF005211 1 329 2.3E-75 T 05-07-2017 IPR012020 AB hydrolase 4 family AC028_RS05310 def2088e79043c0e39ae3dc3a4471e0e 329 Pfam PF12697 Alpha/beta hydrolase family 72 317 5.1E-13 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS05310 def2088e79043c0e39ae3dc3a4471e0e 329 Gene3D G3DSA:3.40.50.1820 51 311 7.8E-30 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS15210 2f22ff142b084077e365f0e5b4d2c926 185 SUPERFAMILY SSF51182 1 176 3.56E-72 T 05-07-2017 IPR011051 RmlC-like cupin domain AC028_RS15210 2f22ff142b084077e365f0e5b4d2c926 185 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 174 9.9E-70 T 05-07-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AC028_RS15210 2f22ff142b084077e365f0e5b4d2c926 185 Gene3D G3DSA:2.60.120.10 2 177 1.5E-76 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS15210 2f22ff142b084077e365f0e5b4d2c926 185 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 174 5.5E-79 T 05-07-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AC028_RS15210 2f22ff142b084077e365f0e5b4d2c926 185 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 175 6.0E-82 T 05-07-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AC028_RS18075 7b85a00895f1a3b8247d382345650a8e 358 SMART SM00448 7 130 2.6E-21 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS18075 7b85a00895f1a3b8247d382345650a8e 358 Pfam PF00072 Response regulator receiver domain 9 111 8.9E-25 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS18075 7b85a00895f1a3b8247d382345650a8e 358 SUPERFAMILY SSF52172 6 111 1.85E-28 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS18075 7b85a00895f1a3b8247d382345650a8e 358 SUPERFAMILY SSF52738 167 354 1.7E-69 T 05-07-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AC028_RS18075 7b85a00895f1a3b8247d382345650a8e 358 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 7 355 40.777 T 05-07-2017 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AC028_RS18075 7b85a00895f1a3b8247d382345650a8e 358 Gene3D G3DSA:3.40.50.180 166 355 5.5E-78 T 05-07-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AC028_RS18075 7b85a00895f1a3b8247d382345650a8e 358 Pfam PF01339 CheB methylesterase 172 350 6.5E-57 T 05-07-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AC028_RS18075 7b85a00895f1a3b8247d382345650a8e 358 Gene3D G3DSA:3.40.50.2300 6 111 3.2E-28 T 05-07-2017 AC028_RS18075 7b85a00895f1a3b8247d382345650a8e 358 PIRSF PIRSF000876 4 358 3.6E-135 T 05-07-2017 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AC028_RS14485 f92692d9c39640732ab95a0cbd98977a 308 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 50 268 1.9E-53 T 05-07-2017 IPR018713 Domain of unknown function DUF2236 AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 SUPERFAMILY SSF55021 313 405 7.1E-12 T 05-07-2017 AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 PRINTS PR01181 Diaminopimelate decarboxylase signature 553 570 5.1E-13 T 05-07-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 PRINTS PR01181 Diaminopimelate decarboxylase signature 639 648 5.1E-13 T 05-07-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 PRINTS PR01181 Diaminopimelate decarboxylase signature 770 788 5.1E-13 T 05-07-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 PRINTS PR01181 Diaminopimelate decarboxylase signature 853 869 5.1E-13 T 05-07-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 535 553 1.6E-22 T 05-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 843 856 1.6E-22 T 05-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 664 677 1.6E-22 T 05-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 742 761 1.6E-22 T 05-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 555 567 1.6E-22 T 05-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 Gene3D G3DSA:2.40.37.10 743 864 3.9E-37 T 05-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 Pfam PF00696 Amino acid kinase family 10 291 1.8E-39 T 05-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 Gene3D G3DSA:3.20.20.10 521 742 5.9E-59 T 05-07-2017 IPR029066 PLP-binding barrel AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 SUPERFAMILY SSF55021 389 460 1.91E-9 T 05-07-2017 AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 535 553 - T 05-07-2017 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 504 861 4.2E-91 T 05-07-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 773 861 2.8E-14 T 05-07-2017 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 517 752 1.9E-44 T 05-07-2017 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 ProSitePatterns PS00324 Aspartokinase signature. 12 20 - T 05-07-2017 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 Gene3D G3DSA:3.40.1160.10 110 308 2.8E-54 T 05-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 Gene3D G3DSA:3.40.1160.10 8 60 2.8E-54 T 05-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 695 711 - T 05-07-2017 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 SUPERFAMILY SSF53633 9 305 7.52E-56 T 05-07-2017 IPR001048 Aspartate/glutamate/uridylate kinase AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 PIRSF PIRSF036459 1 869 0.0 T 05-07-2017 IPR011246 Bifunctional diaminopimelate decarboxylase/aspartate kinase AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 SUPERFAMILY SSF51419 506 754 4.51E-56 T 05-07-2017 IPR029066 PLP-binding barrel AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 10 460 1.6E-81 T 05-07-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AC028_RS00195 c71219685b03a7463107b0b0c30b1d27 869 SUPERFAMILY SSF50621 732 864 3.35E-40 T 05-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AC028_RS05820 55d27c1d5928e99096d6cf72d562699a 233 SUPERFAMILY SSF53474 5 231 6.76E-41 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS05820 55d27c1d5928e99096d6cf72d562699a 233 PRINTS PR00111 Alpha/beta hydrolase fold signature 76 89 2.2E-5 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS05820 55d27c1d5928e99096d6cf72d562699a 233 PRINTS PR00111 Alpha/beta hydrolase fold signature 177 191 2.2E-5 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS05820 55d27c1d5928e99096d6cf72d562699a 233 PRINTS PR00111 Alpha/beta hydrolase fold signature 62 75 2.2E-5 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS05820 55d27c1d5928e99096d6cf72d562699a 233 Gene3D G3DSA:3.40.50.1820 5 231 2.0E-35 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS05820 55d27c1d5928e99096d6cf72d562699a 233 Pfam PF12697 Alpha/beta hydrolase family 9 226 3.7E-12 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS10615 7c325a27f75d4578b4f21452fea31476 495 Gene3D G3DSA:3.40.1190.10 100 335 2.4E-79 T 05-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AC028_RS10615 7c325a27f75d4578b4f21452fea31476 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 417 1.9E-19 T 05-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AC028_RS10615 7c325a27f75d4578b4f21452fea31476 495 Pfam PF01225 Mur ligase family, catalytic domain 22 96 6.0E-10 T 05-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AC028_RS10615 7c325a27f75d4578b4f21452fea31476 495 SUPERFAMILY SSF53244 332 487 1.44E-46 T 05-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AC028_RS10615 7c325a27f75d4578b4f21452fea31476 495 Gene3D G3DSA:3.40.1390.10 14 98 5.1E-19 T 05-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AC028_RS10615 7c325a27f75d4578b4f21452fea31476 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 485 33.772 T 05-07-2017 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AC028_RS10615 7c325a27f75d4578b4f21452fea31476 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 20 485 3.6E-152 T 05-07-2017 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AC028_RS10615 7c325a27f75d4578b4f21452fea31476 495 Pfam PF08245 Mur ligase middle domain 109 311 5.0E-49 T 05-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AC028_RS10615 7c325a27f75d4578b4f21452fea31476 495 Gene3D G3DSA:3.90.190.20 336 478 5.2E-54 T 05-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AC028_RS10615 7c325a27f75d4578b4f21452fea31476 495 SUPERFAMILY SSF63418 8 100 2.75E-19 T 05-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AC028_RS10615 7c325a27f75d4578b4f21452fea31476 495 SUPERFAMILY SSF53623 100 331 7.06E-75 T 05-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AC028_RS07255 221d1e9d9c161f6253d0d9ceaa99742e 105 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 20 98 1.6E-24 T 05-07-2017 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein AC028_RS07255 221d1e9d9c161f6253d0d9ceaa99742e 105 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 2 99 3.8E-37 T 05-07-2017 IPR009662 Malonate decarboxylase delta subunit AC028_RS07255 221d1e9d9c161f6253d0d9ceaa99742e 105 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 104 53.764 T 05-07-2017 IPR009662 Malonate decarboxylase delta subunit AC028_RS07255 221d1e9d9c161f6253d0d9ceaa99742e 105 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 99 2.0E-50 T 05-07-2017 IPR009662 Malonate decarboxylase delta subunit AC028_RS07525 ef8d8e021280688f6cdaae5aead1c6b6 290 SUPERFAMILY SSF51556 3 277 1.06E-65 T 05-07-2017 IPR032466 Metal-dependent hydrolase AC028_RS07525 ef8d8e021280688f6cdaae5aead1c6b6 290 Pfam PF04909 Amidohydrolase 4 277 6.2E-38 T 05-07-2017 IPR006680 Amidohydrolase-related GO:0016787 AC028_RS07525 ef8d8e021280688f6cdaae5aead1c6b6 290 Gene3D G3DSA:3.20.20.140 1 280 3.4E-71 T 05-07-2017 AC028_RS02535 071934ccb301670e392208b9c294c005 459 PIRSF PIRSF002808 9 447 8.8E-47 T 05-07-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AC028_RS02535 071934ccb301670e392208b9c294c005 459 Gene3D G3DSA:1.20.1250.20 16 215 5.6E-47 T 05-07-2017 AC028_RS02535 071934ccb301670e392208b9c294c005 459 Pfam PF07690 Major Facilitator Superfamily 25 319 4.4E-51 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS02535 071934ccb301670e392208b9c294c005 459 Gene3D G3DSA:1.20.1250.20 245 441 6.6E-37 T 05-07-2017 AC028_RS02535 071934ccb301670e392208b9c294c005 459 SUPERFAMILY SSF103473 12 444 3.53E-85 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS02535 071934ccb301670e392208b9c294c005 459 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 27 436 1.1E-147 T 05-07-2017 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 AC028_RS01465 35af706b8845237c3e2fdf9d3cd5ce18 588 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 1.7E-226 T 05-07-2017 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 Reactome: R-HSA-379726 AC028_RS01465 35af706b8845237c3e2fdf9d3cd5ce18 588 Pfam PF01336 OB-fold nucleic acid binding domain 18 105 1.0E-12 T 05-07-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AC028_RS01465 35af706b8845237c3e2fdf9d3cd5ce18 588 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 558 7.4E-106 T 05-07-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS01465 35af706b8845237c3e2fdf9d3cd5ce18 588 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 34.865 T 05-07-2017 AC028_RS01465 35af706b8845237c3e2fdf9d3cd5ce18 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 6.3E-26 T 05-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS01465 35af706b8845237c3e2fdf9d3cd5ce18 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 6.3E-26 T 05-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS01465 35af706b8845237c3e2fdf9d3cd5ce18 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 6.3E-26 T 05-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS01465 35af706b8845237c3e2fdf9d3cd5ce18 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 6.3E-26 T 05-07-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS01465 35af706b8845237c3e2fdf9d3cd5ce18 588 SUPERFAMILY SSF50249 1 112 2.2E-26 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS01465 35af706b8845237c3e2fdf9d3cd5ce18 588 SUPERFAMILY SSF55681 115 295 5.38E-105 T 05-07-2017 AC028_RS01465 35af706b8845237c3e2fdf9d3cd5ce18 588 SUPERFAMILY SSF55681 424 585 5.38E-105 T 05-07-2017 AC028_RS01465 35af706b8845237c3e2fdf9d3cd5ce18 588 Gene3D G3DSA:3.30.930.10 134 279 5.5E-111 T 05-07-2017 AC028_RS01465 35af706b8845237c3e2fdf9d3cd5ce18 588 Gene3D G3DSA:3.30.930.10 414 584 5.5E-111 T 05-07-2017 AC028_RS01465 35af706b8845237c3e2fdf9d3cd5ce18 588 SUPERFAMILY SSF55261 294 420 4.14E-41 T 05-07-2017 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AC028_RS01465 35af706b8845237c3e2fdf9d3cd5ce18 588 Gene3D G3DSA:3.30.1360.30 280 413 1.4E-46 T 05-07-2017 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AC028_RS01465 35af706b8845237c3e2fdf9d3cd5ce18 588 Gene3D G3DSA:2.40.50.140 1 109 3.0E-31 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS01465 35af706b8845237c3e2fdf9d3cd5ce18 588 Pfam PF02938 GAD domain 311 405 2.1E-26 T 05-07-2017 IPR029351 GAD domain Reactome: R-HSA-379726 AC028_RS10225 b5258efd9ae71c6df881954e8a818ba6 200 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS10225 b5258efd9ae71c6df881954e8a818ba6 200 Pfam PF11612 Type II secretion system (T2SS), protein J 60 193 1.4E-32 T 05-07-2017 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AC028_RS10225 b5258efd9ae71c6df881954e8a818ba6 200 SUPERFAMILY SSF54523 41 198 3.61E-38 T 05-07-2017 AC028_RS10225 b5258efd9ae71c6df881954e8a818ba6 200 Gene3D G3DSA:2.10.70.20 149 198 1.4E-15 T 05-07-2017 AC028_RS10225 b5258efd9ae71c6df881954e8a818ba6 200 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 2.2E-8 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS10225 b5258efd9ae71c6df881954e8a818ba6 200 Gene3D G3DSA:3.10.610.10 40 144 2.3E-22 T 05-07-2017 AC028_RS10225 b5258efd9ae71c6df881954e8a818ba6 200 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 8 195 9.2E-40 T 05-07-2017 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AC028_RS10225 b5258efd9ae71c6df881954e8a818ba6 200 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 5 29 5.4E-9 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS07245 6033c3626b46f1858a3a7d93f95b9bb3 178 SUPERFAMILY SSF46785 34 127 2.31E-22 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS07245 6033c3626b46f1858a3a7d93f95b9bb3 178 Gene3D G3DSA:1.10.10.10 26 123 9.7E-28 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS07245 6033c3626b46f1858a3a7d93f95b9bb3 178 Pfam PF03551 Transcriptional regulator PadR-like family 39 107 2.8E-18 T 05-07-2017 IPR005149 Transcription regulator PadR, N-terminal AC028_RS10230 5a554a3489871f4c6cccd762daac12b1 329 Gene3D G3DSA:1.10.40.60 220 288 1.9E-19 T 05-07-2017 AC028_RS10230 5a554a3489871f4c6cccd762daac12b1 329 Gene3D G3DSA:1.10.40.60 105 216 2.4E-33 T 05-07-2017 AC028_RS10230 5a554a3489871f4c6cccd762daac12b1 329 Gene3D G3DSA:3.30.1300.30 289 326 6.3E-16 T 05-07-2017 AC028_RS10230 5a554a3489871f4c6cccd762daac12b1 329 Gene3D G3DSA:3.30.1300.30 35 103 6.3E-16 T 05-07-2017 AC028_RS10230 5a554a3489871f4c6cccd762daac12b1 329 Pfam PF03934 Type II secretion system (T2SS), protein K 36 318 1.5E-80 T 05-07-2017 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AC028_RS10230 5a554a3489871f4c6cccd762daac12b1 329 PIRSF PIRSF002786 5 329 9.2E-70 T 05-07-2017 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AC028_RS10230 5a554a3489871f4c6cccd762daac12b1 329 SUPERFAMILY SSF158544 220 286 2.56E-15 T 05-07-2017 AC028_RS10230 5a554a3489871f4c6cccd762daac12b1 329 SUPERFAMILY SSF54523 287 325 6.28E-17 T 05-07-2017 AC028_RS10230 5a554a3489871f4c6cccd762daac12b1 329 SUPERFAMILY SSF54523 40 105 6.28E-17 T 05-07-2017 AC028_RS10230 5a554a3489871f4c6cccd762daac12b1 329 SUPERFAMILY SSF158544 106 216 6.28E-28 T 05-07-2017 AC028_RS08380 5d38da5bba01f14d7c8db6d3e1c92ead 110 Gene3D G3DSA:3.30.70.830 6 108 8.1E-39 T 05-07-2017 AC028_RS08380 5d38da5bba01f14d7c8db6d3e1c92ead 110 Pfam PF03091 CutA1 divalent ion tolerance protein 9 104 2.8E-33 T 05-07-2017 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 AC028_RS08380 5d38da5bba01f14d7c8db6d3e1c92ead 110 SUPERFAMILY SSF54913 5 107 3.6E-36 T 05-07-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta AC028_RS20495 a8382c9cbf11a5273480b1493decda10 552 SUPERFAMILY SSF58104 234 501 6.15E-67 T 05-07-2017 AC028_RS20495 a8382c9cbf11a5273480b1493decda10 552 SMART SM00283 267 500 9.5E-72 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS20495 a8382c9cbf11a5273480b1493decda10 552 Pfam PF00672 HAMP domain 195 262 3.8E-12 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS20495 a8382c9cbf11a5273480b1493decda10 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 281 310 2.3E-28 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS20495 a8382c9cbf11a5273480b1493decda10 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.3E-28 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS20495 a8382c9cbf11a5273480b1493decda10 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 358 385 2.3E-28 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS20495 a8382c9cbf11a5273480b1493decda10 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 387 416 2.3E-28 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS20495 a8382c9cbf11a5273480b1493decda10 552 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 499 6.0E-41 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS20495 a8382c9cbf11a5273480b1493decda10 552 Gene3D G3DSA:1.10.287.950 281 472 1.8E-45 T 05-07-2017 AC028_RS20495 a8382c9cbf11a5273480b1493decda10 552 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 183 4.5E-24 T 05-07-2017 IPR024478 4HB MCP domain AC028_RS20495 a8382c9cbf11a5273480b1493decda10 552 SMART SM00304 214 266 7.5E-11 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS11710 4fe6ebe625f2afc752ad2ff947827266 132 Pfam PF00410 Ribosomal protein S8 5 131 1.4E-46 T 05-07-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11710 4fe6ebe625f2afc752ad2ff947827266 132 SUPERFAMILY SSF56047 2 131 2.35E-43 T 05-07-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11710 4fe6ebe625f2afc752ad2ff947827266 132 Gene3D G3DSA:3.30.1490.10 76 131 7.7E-27 T 05-07-2017 AC028_RS11710 4fe6ebe625f2afc752ad2ff947827266 132 Gene3D G3DSA:3.30.1370.30 2 73 7.6E-26 T 05-07-2017 AC028_RS11710 4fe6ebe625f2afc752ad2ff947827266 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 05-07-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11710 4fe6ebe625f2afc752ad2ff947827266 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 30.386 T 05-07-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS18530 c421059268a3930a4f8684d34e95c396 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 247 3.6E-44 T 05-07-2017 AC028_RS18530 c421059268a3930a4f8684d34e95c396 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 7.4E-28 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18530 c421059268a3930a4f8684d34e95c396 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 7.4E-28 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18530 c421059268a3930a4f8684d34e95c396 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 7.4E-28 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18530 c421059268a3930a4f8684d34e95c396 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 7.4E-28 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18530 c421059268a3930a4f8684d34e95c396 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 7.4E-28 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18530 c421059268a3930a4f8684d34e95c396 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 7.4E-28 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18530 c421059268a3930a4f8684d34e95c396 254 SUPERFAMILY SSF51735 8 248 2.41E-60 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS18530 c421059268a3930a4f8684d34e95c396 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 05-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AC028_RS18530 c421059268a3930a4f8684d34e95c396 254 Gene3D G3DSA:3.40.50.720 4 248 2.1E-62 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS18530 c421059268a3930a4f8684d34e95c396 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.1E-5 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18530 c421059268a3930a4f8684d34e95c396 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.1E-5 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18530 c421059268a3930a4f8684d34e95c396 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 2.1E-5 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS00810 fc30a4eb10678cb9f90aeeb48156a710 767 SUPERFAMILY SSF52172 647 766 2.13E-32 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS00810 fc30a4eb10678cb9f90aeeb48156a710 767 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 514 625 1.5E-24 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS00810 fc30a4eb10678cb9f90aeeb48156a710 767 SMART SM00448 648 759 9.3E-29 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS00810 fc30a4eb10678cb9f90aeeb48156a710 767 SUPERFAMILY SSF47384 390 467 2.55E-17 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS00810 fc30a4eb10678cb9f90aeeb48156a710 767 SUPERFAMILY SSF55874 455 626 3.01E-44 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS00810 fc30a4eb10678cb9f90aeeb48156a710 767 Gene3D G3DSA:3.40.50.2300 640 766 1.7E-31 T 05-07-2017 AC028_RS00810 fc30a4eb10678cb9f90aeeb48156a710 767 SUPERFAMILY SSF63829 5 205 3.11E-19 T 05-07-2017 AC028_RS00810 fc30a4eb10678cb9f90aeeb48156a710 767 Gene3D G3DSA:1.10.287.130 395 462 2.1E-13 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS00810 fc30a4eb10678cb9f90aeeb48156a710 767 SMART SM00387 513 627 1.7E-35 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS00810 fc30a4eb10678cb9f90aeeb48156a710 767 SMART SM00388 401 466 9.6E-22 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS00810 fc30a4eb10678cb9f90aeeb48156a710 767 Gene3D G3DSA:2.120.10.30 3 201 8.1E-15 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS00810 fc30a4eb10678cb9f90aeeb48156a710 767 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 579 5.3E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS00810 fc30a4eb10678cb9f90aeeb48156a710 767 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 565 5.3E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS00810 fc30a4eb10678cb9f90aeeb48156a710 767 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 605 5.3E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS00810 fc30a4eb10678cb9f90aeeb48156a710 767 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 624 5.3E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS00810 fc30a4eb10678cb9f90aeeb48156a710 767 Pfam PF00072 Response regulator receiver domain 650 758 3.6E-20 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS00810 fc30a4eb10678cb9f90aeeb48156a710 767 Pfam PF00512 His Kinase A (phospho-acceptor) domain 401 466 4.6E-17 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS00810 fc30a4eb10678cb9f90aeeb48156a710 767 Gene3D G3DSA:3.30.565.10 467 626 2.7E-45 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS00810 fc30a4eb10678cb9f90aeeb48156a710 767 Pfam PF07495 Y_Y_Y domain 285 346 2.1E-14 T 05-07-2017 IPR011123 Two component regulator three Y AC028_RS10215 d73601a84fec0ad81b784d08b8b976ee 154 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 1.7E-6 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS10215 d73601a84fec0ad81b784d08b8b976ee 154 SUPERFAMILY SSF54523 11 122 2.35E-9 T 05-07-2017 AC028_RS10215 d73601a84fec0ad81b784d08b8b976ee 154 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS10215 d73601a84fec0ad81b784d08b8b976ee 154 Pfam PF12019 Type II transport protein GspH 45 145 1.6E-10 T 05-07-2017 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AC028_RS10215 d73601a84fec0ad81b784d08b8b976ee 154 Gene3D G3DSA:3.55.40.10 40 110 8.8E-8 T 05-07-2017 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AC028_RS10215 d73601a84fec0ad81b784d08b8b976ee 154 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 9 149 7.2E-22 T 05-07-2017 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AC028_RS10215 d73601a84fec0ad81b784d08b8b976ee 154 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 27 1.4E-5 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS10215 d73601a84fec0ad81b784d08b8b976ee 154 PRINTS PR00885 Bacterial general secretion pathway protein H signature 6 20 1.0E-6 T 05-07-2017 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AC028_RS10215 d73601a84fec0ad81b784d08b8b976ee 154 PRINTS PR00885 Bacterial general secretion pathway protein H signature 21 35 1.0E-6 T 05-07-2017 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AC028_RS02345 92f37a88d54c6948bc6fbd1c28ef388e 121 SUPERFAMILY SSF46785 1 118 1.39E-28 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS02345 92f37a88d54c6948bc6fbd1c28ef388e 121 PIRSF PIRSF019455 1 121 2.4E-39 T 05-07-2017 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 AC028_RS02345 92f37a88d54c6948bc6fbd1c28ef388e 121 Pfam PF03965 Penicillinase repressor 3 115 6.3E-36 T 05-07-2017 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 AC028_RS02345 92f37a88d54c6948bc6fbd1c28ef388e 121 Gene3D G3DSA:1.10.10.10 2 76 2.3E-25 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS01735 990120ff316bfbedf7f69a75c8c8c0cb 235 SUPERFAMILY SSF52833 1 81 4.7E-16 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS01735 990120ff316bfbedf7f69a75c8c8c0cb 235 SUPERFAMILY SSF47616 103 227 5.51E-22 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS01735 990120ff316bfbedf7f69a75c8c8c0cb 235 Gene3D G3DSA:1.20.1050.10 102 203 6.4E-51 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS01735 990120ff316bfbedf7f69a75c8c8c0cb 235 Gene3D G3DSA:3.40.30.10 1 101 6.8E-42 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS01735 990120ff316bfbedf7f69a75c8c8c0cb 235 Pfam PF14497 Glutathione S-transferase, C-terminal domain 109 215 2.3E-27 T 05-07-2017 IPR004046 Glutathione S-transferase, C-terminal AC028_RS18635 f9389f1709f98c9daf62ff22ba55ca0c 407 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 05-07-2017 IPR019776 Flagellar basal body rod protein, conserved site AC028_RS18635 f9389f1709f98c9daf62ff22ba55ca0c 407 SUPERFAMILY SSF117143 79 368 5.49E-75 T 05-07-2017 AC028_RS18635 f9389f1709f98c9daf62ff22ba55ca0c 407 Pfam PF00460 Flagella basal body rod protein 3 33 1.8E-8 T 05-07-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AC028_RS18635 f9389f1709f98c9daf62ff22ba55ca0c 407 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 389 3.9E-107 T 05-07-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AC028_RS18635 f9389f1709f98c9daf62ff22ba55ca0c 407 Pfam PF07559 Flagellar basal body protein FlaE 177 288 1.3E-22 T 05-07-2017 IPR011491 Flagellar hook protein FlgE AC028_RS18635 f9389f1709f98c9daf62ff22ba55ca0c 407 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 328 406 1.3E-19 T 05-07-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AC028_RS09985 89e6926096bdcc5280853aa85811577d 661 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 435 450 - T 05-07-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AC028_RS09985 89e6926096bdcc5280853aa85811577d 661 Gene3D G3DSA:1.10.8.60 523 594 2.4E-17 T 05-07-2017 AC028_RS09985 89e6926096bdcc5280853aa85811577d 661 Gene3D G3DSA:1.10.10.60 612 659 6.4E-15 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS09985 89e6926096bdcc5280853aa85811577d 661 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 639 659 1.6E-8 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS09985 89e6926096bdcc5280853aa85811577d 661 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 622 639 1.6E-8 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS09985 89e6926096bdcc5280853aa85811577d 661 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 558 567 - T 05-07-2017 IPR025944 Sigma-54 interaction domain, conserved site AC028_RS09985 89e6926096bdcc5280853aa85811577d 661 SUPERFAMILY SSF55781 81 221 1.18E-8 T 05-07-2017 IPR029016 GAF domain-like AC028_RS09985 89e6926096bdcc5280853aa85811577d 661 SUPERFAMILY SSF46689 558 658 2.09E-15 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS09985 89e6926096bdcc5280853aa85811577d 661 SMART SM00382 368 512 1.1E-9 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS09985 89e6926096bdcc5280853aa85811577d 661 Pfam PF02954 Bacterial regulatory protein, Fis family 616 656 2.4E-14 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS09985 89e6926096bdcc5280853aa85811577d 661 Pfam PF00158 Sigma-54 interaction domain 349 515 2.2E-59 T 05-07-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AC028_RS09985 89e6926096bdcc5280853aa85811577d 661 SUPERFAMILY SSF52540 348 588 3.29E-61 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS09985 89e6926096bdcc5280853aa85811577d 661 Gene3D G3DSA:3.40.50.300 347 521 5.4E-50 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS09985 89e6926096bdcc5280853aa85811577d 661 Gene3D G3DSA:3.30.450.20 246 296 3.9E-4 T 05-07-2017 AC028_RS09265 d3be34bac1f4592a193d2bcd8b7bc82f 226 Gene3D G3DSA:3.40.225.10 5 189 5.4E-48 T 05-07-2017 IPR001303 Class II aldolase/adducin N-terminal AC028_RS09265 d3be34bac1f4592a193d2bcd8b7bc82f 226 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 183 6.5E-41 T 05-07-2017 IPR001303 Class II aldolase/adducin N-terminal AC028_RS09265 d3be34bac1f4592a193d2bcd8b7bc82f 226 SMART SM01007 8 186 1.1E-45 T 05-07-2017 IPR001303 Class II aldolase/adducin N-terminal AC028_RS09265 d3be34bac1f4592a193d2bcd8b7bc82f 226 SUPERFAMILY SSF53639 4 189 1.57E-45 T 05-07-2017 IPR001303 Class II aldolase/adducin N-terminal AC028_RS01685 f491b56c71695b81c6a20422362ebfea 626 Gene3D G3DSA:2.40.170.20 161 623 2.7E-84 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01685 f491b56c71695b81c6a20422362ebfea 626 SUPERFAMILY SSF56935 35 622 2.93E-118 T 05-07-2017 AC028_RS01685 f491b56c71695b81c6a20422362ebfea 626 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 154 3.9E-29 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS01685 f491b56c71695b81c6a20422362ebfea 626 Gene3D G3DSA:2.170.130.10 25 160 3.3E-41 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS01685 f491b56c71695b81c6a20422362ebfea 626 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 2 624 2.2E-285 T 05-07-2017 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 AC028_RS01685 f491b56c71695b81c6a20422362ebfea 626 Pfam PF00593 TonB dependent receptor 396 623 2.0E-37 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS13850 dcf09c2a27d1082eee2643be263ac368 579 PIRSF PIRSF000719 8 579 2.0E-267 T 05-07-2017 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AC028_RS13850 dcf09c2a27d1082eee2643be263ac368 579 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 9 579 39.65 T 05-07-2017 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AC028_RS13850 dcf09c2a27d1082eee2643be263ac368 579 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 17 572 0.0 T 05-07-2017 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AC028_RS13850 dcf09c2a27d1082eee2643be263ac368 579 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 17 575 1.0E-210 T 05-07-2017 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AC028_RS04175 bff92a936428098f45235ad00c5bbc34 478 SUPERFAMILY SSF50494 59 284 5.48E-63 T 05-07-2017 IPR009003 Peptidase S1, PA clan AC028_RS04175 bff92a936428098f45235ad00c5bbc34 478 Gene3D G3DSA:2.30.42.10 411 473 8.3E-9 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS04175 bff92a936428098f45235ad00c5bbc34 478 Pfam PF13365 Trypsin-like peptidase domain 111 246 1.3E-32 T 05-07-2017 AC028_RS04175 bff92a936428098f45235ad00c5bbc34 478 Gene3D G3DSA:2.40.10.10 53 176 9.4E-33 T 05-07-2017 AC028_RS04175 bff92a936428098f45235ad00c5bbc34 478 SUPERFAMILY SSF50156 287 381 5.13E-20 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS04175 bff92a936428098f45235ad00c5bbc34 478 SMART SM00228 288 370 1.4E-12 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS04175 bff92a936428098f45235ad00c5bbc34 478 SMART SM00228 394 470 0.33 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS04175 bff92a936428098f45235ad00c5bbc34 478 Gene3D G3DSA:2.40.10.10 177 289 2.4E-43 T 05-07-2017 AC028_RS04175 bff92a936428098f45235ad00c5bbc34 478 Gene3D G3DSA:2.30.42.10 290 383 4.2E-25 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS04175 bff92a936428098f45235ad00c5bbc34 478 PRINTS PR00834 HtrA/DegQ protease family signature 328 340 5.1E-52 T 05-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AC028_RS04175 bff92a936428098f45235ad00c5bbc34 478 PRINTS PR00834 HtrA/DegQ protease family signature 239 256 5.1E-52 T 05-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AC028_RS04175 bff92a936428098f45235ad00c5bbc34 478 PRINTS PR00834 HtrA/DegQ protease family signature 142 162 5.1E-52 T 05-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AC028_RS04175 bff92a936428098f45235ad00c5bbc34 478 PRINTS PR00834 HtrA/DegQ protease family signature 217 234 5.1E-52 T 05-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AC028_RS04175 bff92a936428098f45235ad00c5bbc34 478 PRINTS PR00834 HtrA/DegQ protease family signature 182 206 5.1E-52 T 05-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AC028_RS04175 bff92a936428098f45235ad00c5bbc34 478 PRINTS PR00834 HtrA/DegQ protease family signature 121 133 5.1E-52 T 05-07-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AC028_RS04175 bff92a936428098f45235ad00c5bbc34 478 Pfam PF13180 PDZ domain 290 379 4.3E-12 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS04175 bff92a936428098f45235ad00c5bbc34 478 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 61 473 1.4E-126 T 05-07-2017 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AC028_RS04175 bff92a936428098f45235ad00c5bbc34 478 SUPERFAMILY SSF50156 397 474 3.29E-8 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS17635 ac5b6459859a7e573f8de3e4c3ccb8d8 207 SUPERFAMILY SSF52540 1 136 1.42E-10 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS17635 ac5b6459859a7e573f8de3e4c3ccb8d8 207 Gene3D G3DSA:3.40.50.300 3 135 3.4E-11 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS08050 cb242398a92a2b9c5b1cfe5be173bcbf 109 Gene3D G3DSA:1.10.287.110 46 109 1.4E-17 T 05-07-2017 IPR001623 DnaJ domain AC028_RS08050 cb242398a92a2b9c5b1cfe5be173bcbf 109 Pfam PF00226 DnaJ domain 46 109 2.5E-13 T 05-07-2017 IPR001623 DnaJ domain AC028_RS08050 cb242398a92a2b9c5b1cfe5be173bcbf 109 SUPERFAMILY SSF46565 10 109 8.24E-22 T 05-07-2017 IPR001623 DnaJ domain AC028_RS08050 cb242398a92a2b9c5b1cfe5be173bcbf 109 PRINTS PR00625 DnaJ domain signature 88 108 3.4E-10 T 05-07-2017 IPR001623 DnaJ domain AC028_RS08050 cb242398a92a2b9c5b1cfe5be173bcbf 109 PRINTS PR00625 DnaJ domain signature 66 81 3.4E-10 T 05-07-2017 IPR001623 DnaJ domain AC028_RS08050 cb242398a92a2b9c5b1cfe5be173bcbf 109 PRINTS PR00625 DnaJ domain signature 48 66 3.4E-10 T 05-07-2017 IPR001623 DnaJ domain AC028_RS08050 cb242398a92a2b9c5b1cfe5be173bcbf 109 SMART SM00271 45 108 2.7E-15 T 05-07-2017 IPR001623 DnaJ domain AC028_RS08910 0ff598cdd2fe880e37250c821905dbf2 1115 Gene3D G3DSA:1.10.10.10 18 111 3.0E-23 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS08910 0ff598cdd2fe880e37250c821905dbf2 1115 SUPERFAMILY SSF48452 685 839 8.6E-9 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS08910 0ff598cdd2fe880e37250c821905dbf2 1115 SUPERFAMILY SSF46894 17 110 1.08E-19 T 05-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AC028_RS08910 0ff598cdd2fe880e37250c821905dbf2 1115 Gene3D G3DSA:3.40.50.300 152 333 1.2E-5 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS08910 0ff598cdd2fe880e37250c821905dbf2 1115 Pfam PF00486 Transcriptional regulatory protein, C terminal 35 110 3.2E-19 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS08910 0ff598cdd2fe880e37250c821905dbf2 1115 Gene3D G3DSA:1.25.40.10 670 829 2.1E-9 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS08910 0ff598cdd2fe880e37250c821905dbf2 1115 Gene3D G3DSA:1.25.40.10 1021 1053 9.9E-5 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS08910 0ff598cdd2fe880e37250c821905dbf2 1115 Gene3D G3DSA:1.25.40.10 848 961 9.9E-5 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS08910 0ff598cdd2fe880e37250c821905dbf2 1115 SMART SM00862 35 110 3.3E-19 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS08910 0ff598cdd2fe880e37250c821905dbf2 1115 Pfam PF13191 AAA ATPase domain 150 324 7.4E-13 T 05-07-2017 AC028_RS08910 0ff598cdd2fe880e37250c821905dbf2 1115 SUPERFAMILY SSF52540 142 239 3.32E-10 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS08910 0ff598cdd2fe880e37250c821905dbf2 1115 SUPERFAMILY SSF52540 283 381 3.32E-10 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02375 aec24a4b8654e8870ddcd479de05e0b2 726 Gene3D G3DSA:2.40.170.20 194 726 3.0E-125 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02375 aec24a4b8654e8870ddcd479de05e0b2 726 Pfam PF00593 TonB dependent receptor 492 725 6.7E-23 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02375 aec24a4b8654e8870ddcd479de05e0b2 726 Gene3D G3DSA:2.170.130.10 58 185 7.7E-36 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS02375 aec24a4b8654e8870ddcd479de05e0b2 726 Pfam PF07715 TonB-dependent Receptor Plug Domain 77 177 7.1E-17 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS02375 aec24a4b8654e8870ddcd479de05e0b2 726 SUPERFAMILY SSF56935 44 726 1.08E-120 T 05-07-2017 AC028_RS02375 aec24a4b8654e8870ddcd479de05e0b2 726 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 79 726 1.3E-114 T 05-07-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AC028_RS05720 47b95c0a71c3969f50ac802f72b2bbcd 536 SUPERFAMILY SSF52096 23 270 3.62E-72 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS05720 47b95c0a71c3969f50ac802f72b2bbcd 536 SUPERFAMILY SSF52096 277 536 3.56E-87 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS05720 47b95c0a71c3969f50ac802f72b2bbcd 536 Pfam PF01039 Carboxyl transferase domain 48 526 3.6E-149 T 05-07-2017 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS05720 47b95c0a71c3969f50ac802f72b2bbcd 536 Gene3D G3DSA:3.90.226.10 281 531 2.8E-93 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS05720 47b95c0a71c3969f50ac802f72b2bbcd 536 Gene3D G3DSA:3.90.226.10 31 270 1.7E-78 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS13070 b3e4f8f101c0c328ed0f84aff34768ee 565 Gene3D G3DSA:2.30.42.10 460 537 1.5E-6 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS13070 b3e4f8f101c0c328ed0f84aff34768ee 565 PIRSF PIRSF016493 1 565 3.3E-144 T 05-07-2017 IPR024191 Peptidase M61 AC028_RS13070 b3e4f8f101c0c328ed0f84aff34768ee 565 SMART SM00228 463 530 0.0087 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS13070 b3e4f8f101c0c328ed0f84aff34768ee 565 Pfam PF07720 Tetratricopeptide repeat 177 211 6.7E-9 T 05-07-2017 IPR011716 Tetratricopeptide TPR-3 AC028_RS13070 b3e4f8f101c0c328ed0f84aff34768ee 565 SUPERFAMILY SSF50156 463 537 1.94E-8 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS13070 b3e4f8f101c0c328ed0f84aff34768ee 565 Pfam PF05299 M61 glycyl aminopeptidase 242 359 1.1E-34 T 05-07-2017 IPR007963 Peptidase M61, catalytic domain AC028_RS15780 287f73d09105dcbc418c1faf2900b2e5 396 SUPERFAMILY SSF111369 56 302 3.79E-72 T 05-07-2017 AC028_RS15780 287f73d09105dcbc418c1faf2900b2e5 396 Gene3D G3DSA:2.40.50.100 67 101 2.8E-23 T 05-07-2017 AC028_RS15780 287f73d09105dcbc418c1faf2900b2e5 396 Gene3D G3DSA:2.40.50.100 176 208 2.8E-23 T 05-07-2017 AC028_RS15780 287f73d09105dcbc418c1faf2900b2e5 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 379 2.6E-82 T 05-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AC028_RS15780 287f73d09105dcbc418c1faf2900b2e5 396 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 298 1.4E-14 T 05-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_RS06070 09560d02647b380bd8b22a4179b98efd 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.5E-7 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS06070 09560d02647b380bd8b22a4179b98efd 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.5E-7 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS06070 09560d02647b380bd8b22a4179b98efd 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.5E-7 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS06070 09560d02647b380bd8b22a4179b98efd 304 Gene3D G3DSA:3.40.190.10 89 181 4.8E-14 T 05-07-2017 AC028_RS06070 09560d02647b380bd8b22a4179b98efd 304 SUPERFAMILY SSF53850 88 296 2.02E-36 T 05-07-2017 AC028_RS06070 09560d02647b380bd8b22a4179b98efd 304 Gene3D G3DSA:1.10.10.10 6 88 5.1E-21 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS06070 09560d02647b380bd8b22a4179b98efd 304 SUPERFAMILY SSF46785 6 111 7.71E-19 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS06070 09560d02647b380bd8b22a4179b98efd 304 Pfam PF03466 LysR substrate binding domain 88 292 5.4E-34 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS06070 09560d02647b380bd8b22a4179b98efd 304 Gene3D G3DSA:3.40.190.10 182 260 4.2E-15 T 05-07-2017 AC028_RS06070 09560d02647b380bd8b22a4179b98efd 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 4.4E-16 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS13010 39ed593881f649e4d1f78f8386076176 943 SUPERFAMILY SSF47323 668 934 5.98E-68 T 05-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS13010 39ed593881f649e4d1f78f8386076176 943 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 05-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS13010 39ed593881f649e4d1f78f8386076176 943 Gene3D G3DSA:3.40.50.620 18 206 1.6E-130 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS13010 39ed593881f649e4d1f78f8386076176 943 Gene3D G3DSA:3.40.50.620 423 653 1.6E-130 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS13010 39ed593881f649e4d1f78f8386076176 943 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 858 1.1E-265 T 05-07-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AC028_RS13010 39ed593881f649e4d1f78f8386076176 943 SUPERFAMILY SSF50677 205 421 5.76E-43 T 05-07-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AC028_RS13010 39ed593881f649e4d1f78f8386076176 943 Gene3D G3DSA:1.10.730.10 658 802 9.2E-42 T 05-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS13010 39ed593881f649e4d1f78f8386076176 943 Pfam PF08264 Anticodon-binding domain of tRNA 701 855 7.5E-27 T 05-07-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AC028_RS13010 39ed593881f649e4d1f78f8386076176 943 SUPERFAMILY SSF52374 5 203 1.72E-132 T 05-07-2017 AC028_RS13010 39ed593881f649e4d1f78f8386076176 943 SUPERFAMILY SSF52374 421 662 1.72E-132 T 05-07-2017 AC028_RS13010 39ed593881f649e4d1f78f8386076176 943 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 29 657 3.4E-206 T 05-07-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS13010 39ed593881f649e4d1f78f8386076176 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 577 586 1.9E-30 T 05-07-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AC028_RS13010 39ed593881f649e4d1f78f8386076176 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 240 263 1.9E-30 T 05-07-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AC028_RS13010 39ed593881f649e4d1f78f8386076176 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 52 63 1.9E-30 T 05-07-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AC028_RS13010 39ed593881f649e4d1f78f8386076176 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 419 434 1.9E-30 T 05-07-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AC028_RS13010 39ed593881f649e4d1f78f8386076176 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 544 557 1.9E-30 T 05-07-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AC028_RS13010 39ed593881f649e4d1f78f8386076176 943 Pfam PF06827 Zinc finger found in FPG and IleRS 905 931 6.0E-7 T 05-07-2017 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AC028_RS13010 39ed593881f649e4d1f78f8386076176 943 Gene3D G3DSA:3.90.740.10 241 422 1.7E-45 T 05-07-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AC028_RS13010 39ed593881f649e4d1f78f8386076176 943 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 3 934 21.025 T 05-07-2017 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 AC028_RS21330 b30b3c59d1fde57d1f1804a79acbe211 376 Gene3D G3DSA:1.10.260.40 9 58 6.0E-20 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS21330 b30b3c59d1fde57d1f1804a79acbe211 376 Gene3D G3DSA:3.40.50.2300 185 344 2.6E-50 T 05-07-2017 AC028_RS21330 b30b3c59d1fde57d1f1804a79acbe211 376 SUPERFAMILY SSF47413 9 65 1.99E-15 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS21330 b30b3c59d1fde57d1f1804a79acbe211 376 SUPERFAMILY SSF53822 83 335 5.3E-54 T 05-07-2017 IPR028082 Periplasmic binding protein-like I AC028_RS21330 b30b3c59d1fde57d1f1804a79acbe211 376 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 54 2.3E-14 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS21330 b30b3c59d1fde57d1f1804a79acbe211 376 Pfam PF13377 Periplasmic binding protein-like domain 183 343 1.5E-36 T 05-07-2017 AC028_RS21330 b30b3c59d1fde57d1f1804a79acbe211 376 Gene3D G3DSA:3.40.50.2300 59 184 1.1E-22 T 05-07-2017 AC028_RS21330 b30b3c59d1fde57d1f1804a79acbe211 376 SMART SM00354 9 79 3.7E-13 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS12430 e164d1198a5143b9202d081aba0a1459 128 SMART SM00448 2 115 1.1E-39 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS12430 e164d1198a5143b9202d081aba0a1459 128 Pfam PF00072 Response regulator receiver domain 4 114 2.8E-27 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS12430 e164d1198a5143b9202d081aba0a1459 128 Gene3D G3DSA:3.40.50.2300 1 124 3.4E-40 T 05-07-2017 AC028_RS12430 e164d1198a5143b9202d081aba0a1459 128 SUPERFAMILY SSF52172 1 123 6.55E-39 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 Gene3D G3DSA:1.20.1640.10 302 511 9.1E-59 T 05-07-2017 AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 Gene3D G3DSA:3.30.70.1430 581 670 4.5E-6 T 05-07-2017 AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 PRINTS PR00702 Acriflavin resistance protein family signature 57 75 8.9E-73 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 PRINTS PR00702 Acriflavin resistance protein family signature 374 395 8.9E-73 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 8.9E-73 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 PRINTS PR00702 Acriflavin resistance protein family signature 455 478 8.9E-73 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 PRINTS PR00702 Acriflavin resistance protein family signature 29 53 8.9E-73 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 PRINTS PR00702 Acriflavin resistance protein family signature 632 646 8.9E-73 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 PRINTS PR00702 Acriflavin resistance protein family signature 402 426 8.9E-73 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 PRINTS PR00702 Acriflavin resistance protein family signature 565 582 8.9E-73 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 PRINTS PR00702 Acriflavin resistance protein family signature 347 370 8.9E-73 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 Pfam PF00873 AcrB/AcrD/AcrF family 23 1070 2.2E-297 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 Gene3D G3DSA:3.30.2090.10 200 282 9.5E-17 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 Gene3D G3DSA:3.30.2090.10 836 849 5.6E-12 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 Gene3D G3DSA:3.30.2090.10 728 798 5.6E-12 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 SUPERFAMILY SSF82693 578 674 3.31E-12 T 05-07-2017 AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 SUPERFAMILY SSF82714 200 284 6.41E-16 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 SUPERFAMILY SSF82693 59 150 8.2E-21 T 05-07-2017 AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 SUPERFAMILY SSF82866 850 1073 3.27E-44 T 05-07-2017 AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 SUPERFAMILY SSF82714 729 799 2.62E-10 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 Gene3D G3DSA:3.30.70.1430 59 158 1.6E-26 T 05-07-2017 AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 SUPERFAMILY SSF82866 307 508 1.96E-49 T 05-07-2017 AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 SUPERFAMILY SSF82693 285 341 1.91E-22 T 05-07-2017 AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 SUPERFAMILY SSF82693 155 199 1.91E-22 T 05-07-2017 AC028_RS13805 83f3e44df297cecb0648a119a7c36e2a 1101 Gene3D G3DSA:1.10.3850.10 857 1072 3.6E-54 T 05-07-2017 AC028_RS21795 b747b49d9f93283171851d4bb9b64905 168 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 91 165 6.0E-25 T 05-07-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AC028_RS21795 b747b49d9f93283171851d4bb9b64905 168 Gene3D G3DSA:1.10.287.180 12 84 4.5E-25 T 05-07-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AC028_RS21795 b747b49d9f93283171851d4bb9b64905 168 Hamap MF_00930 Transcription elongation factor GreB [greB]. 10 166 52.348 T 05-07-2017 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AC028_RS21795 b747b49d9f93283171851d4bb9b64905 168 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 129 145 - T 05-07-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AC028_RS21795 b747b49d9f93283171851d4bb9b64905 168 SUPERFAMILY SSF46557 13 86 1.2E-24 T 05-07-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AC028_RS21795 b747b49d9f93283171851d4bb9b64905 168 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 26 57 - T 05-07-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AC028_RS21795 b747b49d9f93283171851d4bb9b64905 168 Pfam PF03449 Transcription elongation factor, N-terminal 14 83 1.4E-25 T 05-07-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AC028_RS21795 b747b49d9f93283171851d4bb9b64905 168 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 12 166 4.5E-62 T 05-07-2017 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AC028_RS21795 b747b49d9f93283171851d4bb9b64905 168 Hamap MF_00105 Transcription elongation factor GreA [greA]. 11 164 28.885 T 05-07-2017 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AC028_RS21795 b747b49d9f93283171851d4bb9b64905 168 PIRSF PIRSF006092 8 167 1.9E-49 T 05-07-2017 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AC028_RS21795 b747b49d9f93283171851d4bb9b64905 168 Gene3D G3DSA:3.10.50.30 85 165 5.7E-26 T 05-07-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AC028_RS21795 b747b49d9f93283171851d4bb9b64905 168 SUPERFAMILY SSF54534 89 165 1.7E-21 T 05-07-2017 AC028_RS03285 708be37f57a910059071d69ec360ca52 323 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 27 103 2.1E-15 T 05-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AC028_RS03285 708be37f57a910059071d69ec360ca52 323 SUPERFAMILY SSF56349 125 321 1.59E-55 T 05-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AC028_RS03285 708be37f57a910059071d69ec360ca52 323 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 28 322 2.6E-111 T 05-07-2017 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AC028_RS03285 708be37f57a910059071d69ec360ca52 323 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 23 323 62.034 T 05-07-2017 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AC028_RS03285 708be37f57a910059071d69ec360ca52 323 Gene3D G3DSA:1.10.443.10 130 314 6.9E-55 T 05-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AC028_RS03285 708be37f57a910059071d69ec360ca52 323 Gene3D G3DSA:1.10.150.130 26 118 6.4E-22 T 05-07-2017 IPR023109 Integrase/recombinase, N-terminal AC028_RS03285 708be37f57a910059071d69ec360ca52 323 SUPERFAMILY SSF47823 23 119 1.02E-30 T 05-07-2017 IPR010998 Integrase, Lambda-type, N-terminal AC028_RS03285 708be37f57a910059071d69ec360ca52 323 Pfam PF00589 Phage integrase family 131 308 2.2E-45 T 05-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AC028_RS03285 708be37f57a910059071d69ec360ca52 323 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 25 323 54.255 T 05-07-2017 IPR023009 Tyrosine recombinase XerC/XerD AC028_RS16850 3ba5d6d948ae2db7bcb16eecbfa759c5 899 SUPERFAMILY SSF56719 30 520 3.4E-177 T 05-07-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AC028_RS16850 3ba5d6d948ae2db7bcb16eecbfa759c5 899 Gene3D G3DSA:3.90.199.10 34 216 3.1E-83 T 05-07-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AC028_RS16850 3ba5d6d948ae2db7bcb16eecbfa759c5 899 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 873 0.0 T 05-07-2017 AC028_RS16850 3ba5d6d948ae2db7bcb16eecbfa759c5 899 Gene3D G3DSA:2.120.10.90 774 873 6.1E-127 T 05-07-2017 AC028_RS16850 3ba5d6d948ae2db7bcb16eecbfa759c5 899 Gene3D G3DSA:2.120.10.90 531 738 6.1E-127 T 05-07-2017 AC028_RS16850 3ba5d6d948ae2db7bcb16eecbfa759c5 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 1.0E-10 T 05-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AC028_RS16850 3ba5d6d948ae2db7bcb16eecbfa759c5 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 579 6.8E-10 T 05-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AC028_RS16850 3ba5d6d948ae2db7bcb16eecbfa759c5 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 827 873 1.3E-11 T 05-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AC028_RS16850 3ba5d6d948ae2db7bcb16eecbfa759c5 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 1.5E-10 T 05-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AC028_RS16850 3ba5d6d948ae2db7bcb16eecbfa759c5 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 777 822 2.2E-16 T 05-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AC028_RS16850 3ba5d6d948ae2db7bcb16eecbfa759c5 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 5.8E-13 T 05-07-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AC028_RS16850 3ba5d6d948ae2db7bcb16eecbfa759c5 899 Gene3D G3DSA:3.30.1360.40 236 332 1.5E-38 T 05-07-2017 IPR024946 Arginine repressor C-terminal-like domain AC028_RS16850 3ba5d6d948ae2db7bcb16eecbfa759c5 899 SUPERFAMILY SSF101904 772 883 1.2E-104 T 05-07-2017 AC028_RS16850 3ba5d6d948ae2db7bcb16eecbfa759c5 899 SUPERFAMILY SSF101904 532 739 1.2E-104 T 05-07-2017 AC028_RS16850 3ba5d6d948ae2db7bcb16eecbfa759c5 899 SMART SM00434 11 498 3.1E-277 T 05-07-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS16850 3ba5d6d948ae2db7bcb16eecbfa759c5 899 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 875 24.066 T 05-07-2017 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AC028_RS16850 3ba5d6d948ae2db7bcb16eecbfa759c5 899 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 1.1E-153 T 05-07-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS16850 3ba5d6d948ae2db7bcb16eecbfa759c5 899 Gene3D G3DSA:1.10.268.10 362 495 1.3E-44 T 05-07-2017 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AC028_RS04385 a2f1590d3798a51e9433b704689649b2 251 Gene3D G3DSA:3.40.390.10 33 240 1.2E-24 T 05-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AC028_RS04385 a2f1590d3798a51e9433b704689649b2 251 SUPERFAMILY SSF55486 34 241 4.47E-32 T 05-07-2017 AC028_RS04385 a2f1590d3798a51e9433b704689649b2 251 Pfam PF06167 Glucose-regulated metallo-peptidase M90 11 240 4.5E-75 T 05-07-2017 IPR010384 MtfA family AC028_RS21225 a46de751ce3d05fcb4c99adf8dc6ff39 263 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 80 244 3.9E-51 T 05-07-2017 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AC028_RS21225 a46de751ce3d05fcb4c99adf8dc6ff39 263 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 79 245 1.8E-31 T 05-07-2017 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AC028_RS17545 ca8a63a0d6495e4f576c85aa4f4e68d5 967 Pfam PF17137 Domain of unknown function (DUF5110) 860 928 4.4E-20 T 05-07-2017 IPR033403 Domain of unknown function DUF5110 AC028_RS17545 ca8a63a0d6495e4f576c85aa4f4e68d5 967 SUPERFAMILY SSF56988 255 351 9.42E-11 T 05-07-2017 AC028_RS17545 ca8a63a0d6495e4f576c85aa4f4e68d5 967 Gene3D G3DSA:3.90.182.10 227 427 6.5E-19 T 05-07-2017 IPR011658 PA14 domain AC028_RS17545 ca8a63a0d6495e4f576c85aa4f4e68d5 967 SUPERFAMILY SSF51011 760 839 1.37E-21 T 05-07-2017 AC028_RS17545 ca8a63a0d6495e4f576c85aa4f4e68d5 967 SUPERFAMILY SSF51445 398 754 2.57E-48 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS17545 ca8a63a0d6495e4f576c85aa4f4e68d5 967 Pfam PF01055 Glycosyl hydrolases family 31 388 844 1.6E-125 T 05-07-2017 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 AC028_RS17545 ca8a63a0d6495e4f576c85aa4f4e68d5 967 SUPERFAMILY SSF74650 57 216 1.07E-25 T 05-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AC028_RS17545 ca8a63a0d6495e4f576c85aa4f4e68d5 967 SMART SM00758 238 376 1.1E-28 T 05-07-2017 IPR011658 PA14 domain AC028_RS17545 ca8a63a0d6495e4f576c85aa4f4e68d5 967 Pfam PF07691 PA14 domain 275 351 5.9E-10 T 05-07-2017 IPR011658 PA14 domain AC028_RS17545 ca8a63a0d6495e4f576c85aa4f4e68d5 967 Pfam PF16338 Domain of unknown function (DUF4968) 55 135 1.7E-13 T 05-07-2017 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 AC028_RS21875 ad94629334f7478fb073e736ddc15018 135 SUPERFAMILY SSF46767 32 112 4.97E-18 T 05-07-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AC028_RS21875 ad94629334f7478fb073e736ddc15018 135 Gene3D G3DSA:1.10.10.10 30 114 5.8E-16 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS21875 ad94629334f7478fb073e736ddc15018 135 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 35 111 4.3E-17 T 05-07-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AC028_RS01830 cf4412f052d47c4c2eb6bca34ef13646 552 Pfam PF00795 Carbon-nitrogen hydrolase 13 242 3.9E-24 T 05-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AC028_RS01830 cf4412f052d47c4c2eb6bca34ef13646 552 PIRSF PIRSF006630 8 552 1.9E-181 T 05-07-2017 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 AC028_RS01830 cf4412f052d47c4c2eb6bca34ef13646 552 Gene3D G3DSA:3.60.110.10 9 251 3.2E-58 T 05-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AC028_RS01830 cf4412f052d47c4c2eb6bca34ef13646 552 SUPERFAMILY SSF56317 10 251 3.66E-58 T 05-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AC028_RS01830 cf4412f052d47c4c2eb6bca34ef13646 552 SUPERFAMILY SSF52402 275 534 1.28E-75 T 05-07-2017 AC028_RS01830 cf4412f052d47c4c2eb6bca34ef13646 552 TIGRFAM TIGR00552 nadE: NAD+ synthetase 283 532 4.6E-58 T 05-07-2017 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 AC028_RS01830 cf4412f052d47c4c2eb6bca34ef13646 552 Gene3D G3DSA:3.40.50.620 275 533 4.3E-74 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS01830 cf4412f052d47c4c2eb6bca34ef13646 552 Pfam PF02540 NAD synthase 276 525 3.2E-69 T 05-07-2017 IPR022310 NAD/GMP synthase AC028_RS00670 44cb3088f9e9bb2faf8119607b7e2ff0 348 SUPERFAMILY SSF51197 36 337 1.51E-54 T 05-07-2017 AC028_RS00670 44cb3088f9e9bb2faf8119607b7e2ff0 348 Gene3D G3DSA:2.60.120.650 35 269 4.4E-43 T 05-07-2017 AC028_RS00670 44cb3088f9e9bb2faf8119607b7e2ff0 348 SMART SM00558 90 283 5.2E-5 T 05-07-2017 IPR003347 JmjC domain AC028_RS00670 44cb3088f9e9bb2faf8119607b7e2ff0 348 Pfam PF13621 Cupin-like domain 34 271 2.3E-57 T 05-07-2017 AC028_RS02440 19ca727d440f8e1a2bf88e3eff5e7e3c 338 SMART SM00327 98 298 4.6E-23 T 05-07-2017 IPR002035 von Willebrand factor, type A AC028_RS02440 19ca727d440f8e1a2bf88e3eff5e7e3c 338 Pfam PF00092 von Willebrand factor type A domain 101 291 7.1E-26 T 05-07-2017 IPR002035 von Willebrand factor, type A AC028_RS02440 19ca727d440f8e1a2bf88e3eff5e7e3c 338 SUPERFAMILY SSF53300 96 294 4.6E-36 T 05-07-2017 IPR002035 von Willebrand factor, type A AC028_RS02440 19ca727d440f8e1a2bf88e3eff5e7e3c 338 Gene3D G3DSA:3.40.50.410 96 293 7.5E-27 T 05-07-2017 IPR002035 von Willebrand factor, type A AC028_RS07805 0a8c85326b2615b5418bfbb970d8f324 702 Gene3D G3DSA:3.40.720.10 157 454 3.4E-27 T 05-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AC028_RS07805 0a8c85326b2615b5418bfbb970d8f324 702 Pfam PF00884 Sulfatase 157 441 7.5E-24 T 05-07-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AC028_RS07805 0a8c85326b2615b5418bfbb970d8f324 702 SUPERFAMILY SSF53649 155 457 1.26E-39 T 05-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AC028_RS07805 0a8c85326b2615b5418bfbb970d8f324 702 Hamap MF_01070 Phosphoglycerol transferase I [mdoB]. 1 702 57.424 T 05-07-2017 IPR020881 Phosphoglycerol transferase I GO:0005886|GO:0008960|GO:0009250 KEGG: 00561+2.7.8.20 AC028_RS02500 9117c3087091150183e95e085f18b776 80 PRINTS PR01249 Ribosomal protein L31 signature 60 78 7.6E-19 T 05-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS02500 9117c3087091150183e95e085f18b776 80 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.6E-19 T 05-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS02500 9117c3087091150183e95e085f18b776 80 PRINTS PR01249 Ribosomal protein L31 signature 45 60 7.6E-19 T 05-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS02500 9117c3087091150183e95e085f18b776 80 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.8E-20 T 05-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS02500 9117c3087091150183e95e085f18b776 80 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 24.114 T 05-07-2017 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS02500 9117c3087091150183e95e085f18b776 80 Pfam PF01197 Ribosomal protein L31 1 79 6.1E-29 T 05-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS02500 9117c3087091150183e95e085f18b776 80 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 05-07-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS02500 9117c3087091150183e95e085f18b776 80 SUPERFAMILY SSF143800 1 79 2.35E-22 T 05-07-2017 AC028_RS21800 c60d2517662357307ab4bdd31468684e 457 SMART SM00729 137 362 2.2E-52 T 05-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AC028_RS21800 c60d2517662357307ab4bdd31468684e 457 Gene3D G3DSA:3.80.30.20 135 373 5.7E-71 T 05-07-2017 IPR023404 Radical SAM, alpha/beta horseshoe AC028_RS21800 c60d2517662357307ab4bdd31468684e 457 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 6 439 60.153 T 05-07-2017 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AC028_RS21800 c60d2517662357307ab4bdd31468684e 457 Pfam PF00919 Uncharacterized protein family UPF0004 7 99 5.1E-20 T 05-07-2017 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 AC028_RS21800 c60d2517662357307ab4bdd31468684e 457 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 7 437 1.0E-98 T 05-07-2017 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 AC028_RS21800 c60d2517662357307ab4bdd31468684e 457 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 141 161 - T 05-07-2017 IPR020612 Methylthiotransferase, conserved site GO:0051539 AC028_RS21800 c60d2517662357307ab4bdd31468684e 457 Gene3D G3DSA:2.40.50.140 377 440 5.3E-21 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS21800 c60d2517662357307ab4bdd31468684e 457 SUPERFAMILY SSF102114 116 368 2.09E-51 T 05-07-2017 AC028_RS21800 c60d2517662357307ab4bdd31468684e 457 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 7 437 3.2E-172 T 05-07-2017 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AC028_RS21800 c60d2517662357307ab4bdd31468684e 457 Pfam PF04055 Radical SAM superfamily 143 320 6.7E-30 T 05-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AC028_RS10170 14825c5eed9ede01e4d459b55e15e78a 681 SUPERFAMILY SSF56935 42 680 2.9E-93 T 05-07-2017 AC028_RS10170 14825c5eed9ede01e4d459b55e15e78a 681 Pfam PF00593 TonB dependent receptor 436 680 1.7E-26 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS10170 14825c5eed9ede01e4d459b55e15e78a 681 Gene3D G3DSA:2.170.130.10 23 157 1.0E-17 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS10170 14825c5eed9ede01e4d459b55e15e78a 681 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 154 9.8E-16 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS10170 14825c5eed9ede01e4d459b55e15e78a 681 Gene3D G3DSA:2.40.170.20 158 680 1.3E-81 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS10510 a7286c9e916d9844fcf826425d77be21 526 SMART SM00939 294 521 9.9E-24 T 05-07-2017 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 AC028_RS10510 a7286c9e916d9844fcf826425d77be21 526 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 306 510 1.1E-11 T 05-07-2017 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 AC028_RS10510 a7286c9e916d9844fcf826425d77be21 526 SUPERFAMILY SSF53474 31 329 2.44E-41 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS10510 a7286c9e916d9844fcf826425d77be21 526 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 37 275 1.8E-35 T 05-07-2017 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 AC028_RS10510 a7286c9e916d9844fcf826425d77be21 526 Gene3D G3DSA:3.40.50.1820 29 169 8.1E-44 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS10510 a7286c9e916d9844fcf826425d77be21 526 Gene3D G3DSA:3.40.50.1820 222 325 8.1E-44 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS10510 a7286c9e916d9844fcf826425d77be21 526 Gene3D G3DSA:2.60.120.260 326 521 1.5E-10 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS10510 a7286c9e916d9844fcf826425d77be21 526 SUPERFAMILY SSF49785 398 524 8.5E-10 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS20765 ffa045568ad5d7afd3bab9d6f4699ea3 475 Gene3D G3DSA:1.20.1250.20 263 453 7.7E-15 T 05-07-2017 AC028_RS20765 ffa045568ad5d7afd3bab9d6f4699ea3 475 SUPERFAMILY SSF103473 255 462 2.09E-63 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS20765 ffa045568ad5d7afd3bab9d6f4699ea3 475 SUPERFAMILY SSF103473 11 204 2.09E-63 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS20765 ffa045568ad5d7afd3bab9d6f4699ea3 475 Gene3D G3DSA:1.20.1250.20 23 205 3.5E-28 T 05-07-2017 AC028_RS20765 ffa045568ad5d7afd3bab9d6f4699ea3 475 Pfam PF07690 Major Facilitator Superfamily 25 416 5.0E-55 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS20765 ffa045568ad5d7afd3bab9d6f4699ea3 475 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 23 423 4.9E-69 T 05-07-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AC028_RS12655 137958d54f9caa7a5c279fb33b6adf64 354 Gene3D G3DSA:3.30.43.10 1 61 3.4E-20 T 05-07-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AC028_RS12655 137958d54f9caa7a5c279fb33b6adf64 354 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 229 1.1E-45 T 05-07-2017 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 AC028_RS12655 137958d54f9caa7a5c279fb33b6adf64 354 Gene3D G3DSA:3.30.465.10 167 228 2.2E-34 T 05-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AC028_RS12655 137958d54f9caa7a5c279fb33b6adf64 354 Gene3D G3DSA:3.30.465.10 66 123 2.2E-34 T 05-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AC028_RS12655 137958d54f9caa7a5c279fb33b6adf64 354 Gene3D G3DSA:3.30.390.50 236 338 9.8E-36 T 05-07-2017 AC028_RS12655 137958d54f9caa7a5c279fb33b6adf64 354 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 237 334 3.8E-18 T 05-07-2017 IPR005107 CO dehydrogenase flavoprotein, C-terminal AC028_RS12655 137958d54f9caa7a5c279fb33b6adf64 354 SMART SM01092 237 336 2.2E-29 T 05-07-2017 IPR005107 CO dehydrogenase flavoprotein, C-terminal AC028_RS12655 137958d54f9caa7a5c279fb33b6adf64 354 SUPERFAMILY SSF56176 3 229 1.74E-56 T 05-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AC028_RS12655 137958d54f9caa7a5c279fb33b6adf64 354 SUPERFAMILY SSF55447 236 337 1.57E-27 T 05-07-2017 IPR005107 CO dehydrogenase flavoprotein, C-terminal AC028_RS20670 e344b6b3dcf5b6cfa2acdb3211703dfd 459 SUPERFAMILY SSF55931 122 456 5.2E-99 T 05-07-2017 AC028_RS20670 e344b6b3dcf5b6cfa2acdb3211703dfd 459 Gene3D G3DSA:3.10.20.70 25 124 9.2E-9 T 05-07-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AC028_RS20670 e344b6b3dcf5b6cfa2acdb3211703dfd 459 SMART SM01230 121 378 1.6E-99 T 05-07-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AC028_RS20670 e344b6b3dcf5b6cfa2acdb3211703dfd 459 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 05-07-2017 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AC028_RS20670 e344b6b3dcf5b6cfa2acdb3211703dfd 459 Gene3D G3DSA:3.30.590.10 125 446 7.0E-89 T 05-07-2017 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AC028_RS20670 e344b6b3dcf5b6cfa2acdb3211703dfd 459 SUPERFAMILY SSF54368 23 119 2.62E-12 T 05-07-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AC028_RS20670 e344b6b3dcf5b6cfa2acdb3211703dfd 459 Pfam PF00120 Glutamine synthetase, catalytic domain 122 455 9.0E-97 T 05-07-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AC028_RS12600 5a5637219d5e64e27206a752993ee17c 784 Gene3D G3DSA:1.20.1050.60 381 475 2.3E-34 T 05-07-2017 AC028_RS12600 5a5637219d5e64e27206a752993ee17c 784 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 33 765 2.8E-203 T 05-07-2017 IPR005887 Alpha-1,2-mannosidase, putative AC028_RS12600 5a5637219d5e64e27206a752993ee17c 784 Gene3D G3DSA:1.20.1610.10 476 624 5.1E-63 T 05-07-2017 AC028_RS12600 5a5637219d5e64e27206a752993ee17c 784 Pfam PF07971 Glycosyl hydrolase family 92 279 761 1.8E-169 T 05-07-2017 IPR012939 Glycosyl hydrolase family 92 AC028_RS12600 5a5637219d5e64e27206a752993ee17c 784 Gene3D G3DSA:2.70.98.10 36 357 9.7E-95 T 05-07-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 AC028_RS12600 5a5637219d5e64e27206a752993ee17c 784 SUPERFAMILY SSF48208 300 749 1.53E-31 T 05-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AC028_RS12600 5a5637219d5e64e27206a752993ee17c 784 Gene3D G3DSA:3.30.2080.10 625 772 1.1E-64 T 05-07-2017 AC028_RS01700 30c7ce47d48211cf3c3bc6929d1ab020 264 SUPERFAMILY SSF161098 56 237 6.15E-34 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS01700 30c7ce47d48211cf3c3bc6929d1ab020 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 243 2.6E-24 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS01700 30c7ce47d48211cf3c3bc6929d1ab020 264 Gene3D G3DSA:1.10.3720.10 55 247 4.6E-25 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS10775 ab5d201301dbaeb56bfd49916efa4aa5 480 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 13 472 1.5E-186 T 05-07-2017 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AC028_RS10775 ab5d201301dbaeb56bfd49916efa4aa5 480 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 260 277 - T 05-07-2017 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AC028_RS10775 ab5d201301dbaeb56bfd49916efa4aa5 480 SUPERFAMILY SSF51735 238 400 1.07E-79 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS10775 ab5d201301dbaeb56bfd49916efa4aa5 480 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 8 472 47.974 T 05-07-2017 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AC028_RS10775 ab5d201301dbaeb56bfd49916efa4aa5 480 SMART SM00997 238 400 1.7E-110 T 05-07-2017 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AC028_RS10775 ab5d201301dbaeb56bfd49916efa4aa5 480 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 238 400 4.6E-81 T 05-07-2017 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AC028_RS10775 ab5d201301dbaeb56bfd49916efa4aa5 480 Gene3D G3DSA:3.40.50.1480 366 480 3.7E-37 T 05-07-2017 AC028_RS10775 ab5d201301dbaeb56bfd49916efa4aa5 480 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 12 479 4.6E-146 T 05-07-2017 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AC028_RS10775 ab5d201301dbaeb56bfd49916efa4aa5 480 SUPERFAMILY SSF52283 190 237 1.81E-113 T 05-07-2017 AC028_RS10775 ab5d201301dbaeb56bfd49916efa4aa5 480 SUPERFAMILY SSF52283 10 153 1.81E-113 T 05-07-2017 AC028_RS10775 ab5d201301dbaeb56bfd49916efa4aa5 480 SUPERFAMILY SSF52283 401 480 1.81E-113 T 05-07-2017 AC028_RS10775 ab5d201301dbaeb56bfd49916efa4aa5 480 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 84 98 - T 05-07-2017 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AC028_RS10775 ab5d201301dbaeb56bfd49916efa4aa5 480 PIRSF PIRSF001109 1 480 1.9E-190 T 05-07-2017 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AC028_RS10775 ab5d201301dbaeb56bfd49916efa4aa5 480 Gene3D G3DSA:3.40.50.720 277 359 5.4E-14 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS10775 ab5d201301dbaeb56bfd49916efa4aa5 480 Gene3D G3DSA:3.40.50.1480 10 152 1.9E-118 T 05-07-2017 AC028_RS10775 ab5d201301dbaeb56bfd49916efa4aa5 480 Gene3D G3DSA:3.40.50.1480 189 276 1.9E-118 T 05-07-2017 AC028_RS10775 ab5d201301dbaeb56bfd49916efa4aa5 480 SMART SM00996 12 479 0.0 T 05-07-2017 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AC028_RS12745 c9c2d3fc4e7aaedbc0032ce94baa0224 706 Pfam PF07676 WD40-like Beta Propeller Repeat 300 318 0.098 T 05-07-2017 IPR011659 WD40-like Beta Propeller AC028_RS12745 c9c2d3fc4e7aaedbc0032ce94baa0224 706 Pfam PF07676 WD40-like Beta Propeller Repeat 83 114 5.7E-5 T 05-07-2017 IPR011659 WD40-like Beta Propeller AC028_RS12745 c9c2d3fc4e7aaedbc0032ce94baa0224 706 Pfam PF07676 WD40-like Beta Propeller Repeat 138 148 0.23 T 05-07-2017 IPR011659 WD40-like Beta Propeller AC028_RS12745 c9c2d3fc4e7aaedbc0032ce94baa0224 706 Gene3D G3DSA:3.40.50.1820 449 705 1.6E-71 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS12745 c9c2d3fc4e7aaedbc0032ce94baa0224 706 SUPERFAMILY SSF53474 449 704 6.54E-70 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS12745 c9c2d3fc4e7aaedbc0032ce94baa0224 706 SUPERFAMILY SSF82171 34 147 8.44E-37 T 05-07-2017 AC028_RS12745 c9c2d3fc4e7aaedbc0032ce94baa0224 706 SUPERFAMILY SSF82171 183 440 8.44E-37 T 05-07-2017 AC028_RS12745 c9c2d3fc4e7aaedbc0032ce94baa0224 706 Gene3D G3DSA:2.120.10.60 191 391 1.7E-53 T 05-07-2017 AC028_RS12745 c9c2d3fc4e7aaedbc0032ce94baa0224 706 Gene3D G3DSA:2.120.10.60 27 149 1.7E-53 T 05-07-2017 AC028_RS12745 c9c2d3fc4e7aaedbc0032ce94baa0224 706 Pfam PF00326 Prolyl oligopeptidase family 496 705 6.9E-60 T 05-07-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AC028_RS01250 d82ac10064f05a92902793129aa213d8 26 Pfam PF08042 PqqA family 3 21 1.6E-7 T 05-07-2017 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 AC028_RS01250 d82ac10064f05a92902793129aa213d8 26 TIGRFAM TIGR02107 PQQ_syn_pqqA: coenzyme PQQ precursor peptide PqqA 4 23 3.6E-8 T 05-07-2017 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 AC028_RS13380 ead388207efcf55dd47943c38e80d52c 321 SUPERFAMILY SSF160240 215 287 1.44E-10 T 05-07-2017 AC028_RS13380 ead388207efcf55dd47943c38e80d52c 321 Gene3D G3DSA:1.20.1510.10 18 209 6.3E-61 T 05-07-2017 IPR027469 Cation efflux protein transmembrane domain AC028_RS13380 ead388207efcf55dd47943c38e80d52c 321 Pfam PF01545 Cation efflux family 19 209 1.4E-46 T 05-07-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AC028_RS13380 ead388207efcf55dd47943c38e80d52c 321 SUPERFAMILY SSF161111 17 210 2.22E-56 T 05-07-2017 AC028_RS13380 ead388207efcf55dd47943c38e80d52c 321 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 16 288 7.7E-87 T 05-07-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AC028_RS13380 ead388207efcf55dd47943c38e80d52c 321 Gene3D G3DSA:3.30.70.1350 218 286 1.5E-4 T 05-07-2017 IPR027470 Cation efflux protein, cytoplasmic domain AC028_RS16200 dc2e91b2c080685c40ee2167db638b81 375 PRINTS PR00625 DnaJ domain signature 25 40 7.0E-29 T 05-07-2017 IPR001623 DnaJ domain AC028_RS16200 dc2e91b2c080685c40ee2167db638b81 375 PRINTS PR00625 DnaJ domain signature 42 62 7.0E-29 T 05-07-2017 IPR001623 DnaJ domain AC028_RS16200 dc2e91b2c080685c40ee2167db638b81 375 PRINTS PR00625 DnaJ domain signature 62 81 7.0E-29 T 05-07-2017 IPR001623 DnaJ domain AC028_RS16200 dc2e91b2c080685c40ee2167db638b81 375 PRINTS PR00625 DnaJ domain signature 7 25 7.0E-29 T 05-07-2017 IPR001623 DnaJ domain AC028_RS16200 dc2e91b2c080685c40ee2167db638b81 375 Gene3D G3DSA:2.60.260.20 107 138 3.8E-21 T 05-07-2017 AC028_RS16200 dc2e91b2c080685c40ee2167db638b81 375 Gene3D G3DSA:2.60.260.20 207 250 3.8E-21 T 05-07-2017 AC028_RS16200 dc2e91b2c080685c40ee2167db638b81 375 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 345 8.6E-126 T 05-07-2017 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AC028_RS16200 dc2e91b2c080685c40ee2167db638b81 375 SUPERFAMILY SSF49493 255 340 7.59E-20 T 05-07-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AC028_RS16200 dc2e91b2c080685c40ee2167db638b81 375 Gene3D G3DSA:2.60.260.20 252 329 1.1E-20 T 05-07-2017 AC028_RS16200 dc2e91b2c080685c40ee2167db638b81 375 Pfam PF00226 DnaJ domain 5 67 3.3E-26 T 05-07-2017 IPR001623 DnaJ domain AC028_RS16200 dc2e91b2c080685c40ee2167db638b81 375 Pfam PF01556 DnaJ C terminal domain 119 329 5.5E-40 T 05-07-2017 IPR002939 Chaperone DnaJ, C-terminal AC028_RS16200 dc2e91b2c080685c40ee2167db638b81 375 SMART SM00271 4 62 6.8E-31 T 05-07-2017 IPR001623 DnaJ domain AC028_RS16200 dc2e91b2c080685c40ee2167db638b81 375 SUPERFAMILY SSF49493 111 135 3.79E-18 T 05-07-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AC028_RS16200 dc2e91b2c080685c40ee2167db638b81 375 SUPERFAMILY SSF49493 182 255 3.79E-18 T 05-07-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AC028_RS16200 dc2e91b2c080685c40ee2167db638b81 375 Gene3D G3DSA:1.10.287.110 1 101 6.5E-35 T 05-07-2017 IPR001623 DnaJ domain AC028_RS16200 dc2e91b2c080685c40ee2167db638b81 375 SUPERFAMILY SSF46565 1 105 1.15E-33 T 05-07-2017 IPR001623 DnaJ domain AC028_RS16200 dc2e91b2c080685c40ee2167db638b81 375 SUPERFAMILY SSF57938 131 207 8.76E-21 T 05-07-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AC028_RS16200 dc2e91b2c080685c40ee2167db638b81 375 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 369 39.508 T 05-07-2017 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AC028_RS16200 dc2e91b2c080685c40ee2167db638b81 375 Gene3D G3DSA:2.10.230.10 139 206 5.8E-22 T 05-07-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AC028_RS16200 dc2e91b2c080685c40ee2167db638b81 375 Pfam PF00684 DnaJ central domain 144 203 1.3E-13 T 05-07-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AC028_RS00025 020196ec998795b4d0620467953aa780 700 Pfam PF05649 Peptidase family M13 67 442 1.7E-98 T 05-07-2017 IPR008753 Peptidase M13, N-terminal domain GO:0006508 AC028_RS00025 020196ec998795b4d0620467953aa780 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 486 498 3.5E-22 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS00025 020196ec998795b4d0620467953aa780 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 504 516 3.5E-22 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS00025 020196ec998795b4d0620467953aa780 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 596 607 3.5E-22 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS00025 020196ec998795b4d0620467953aa780 700 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 525 541 3.5E-22 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS00025 020196ec998795b4d0620467953aa780 700 SUPERFAMILY SSF55486 57 700 4.58E-211 T 05-07-2017 AC028_RS00025 020196ec998795b4d0620467953aa780 700 Pfam PF01431 Peptidase family M13 494 697 3.8E-72 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS00025 020196ec998795b4d0620467953aa780 700 Gene3D G3DSA:3.40.390.10 324 445 4.1E-113 T 05-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AC028_RS00025 020196ec998795b4d0620467953aa780 700 Gene3D G3DSA:3.40.390.10 485 700 4.1E-113 T 05-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AC028_RS01880 892e12d6e514058215cf285894d5c341 142 Pfam PF00114 Pilin (bacterial filament) 36 141 6.4E-13 T 05-07-2017 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 AC028_RS01880 892e12d6e514058215cf285894d5c341 142 Pfam PF13633 Prokaryotic N-terminal methylation site 4 30 7.0E-13 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS01880 892e12d6e514058215cf285894d5c341 142 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS01880 892e12d6e514058215cf285894d5c341 142 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 2.0E-10 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS01880 892e12d6e514058215cf285894d5c341 142 SUPERFAMILY SSF54523 7 141 2.88E-23 T 05-07-2017 AC028_RS01880 892e12d6e514058215cf285894d5c341 142 Gene3D G3DSA:3.30.700.10 7 141 2.0E-32 T 05-07-2017 AC028_RS08045 888067174c6099f6917ac467b56900ad 310 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 20 305 3.3E-73 T 05-07-2017 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 AC028_RS08045 888067174c6099f6917ac467b56900ad 310 Gene3D G3DSA:3.30.470.20 131 261 6.9E-57 T 05-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AC028_RS08045 888067174c6099f6917ac467b56900ad 310 Pfam PF01259 SAICAR synthetase 19 281 5.8E-97 T 05-07-2017 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AC028_RS08045 888067174c6099f6917ac467b56900ad 310 SUPERFAMILY SSF56104 7 307 9.81E-100 T 05-07-2017 AC028_RS08045 888067174c6099f6917ac467b56900ad 310 ProSitePatterns PS01058 SAICAR synthetase signature 2. 218 226 - T 05-07-2017 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AC028_RS08045 888067174c6099f6917ac467b56900ad 310 Gene3D G3DSA:3.30.200.20 6 130 1.8E-40 T 05-07-2017 AC028_RS08045 888067174c6099f6917ac467b56900ad 310 ProSitePatterns PS01057 SAICAR synthetase signature 1. 119 133 - T 05-07-2017 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AC028_RS08045 888067174c6099f6917ac467b56900ad 310 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 15 306 28.512 T 05-07-2017 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AC028_RS10880 d8fd271fb2dbfb661c261085212182f0 81 Pfam PF10636 Hemin uptake protein hemP 46 81 6.2E-18 T 05-07-2017 IPR019600 Hemin uptake protein HemP AC028_RS10880 d8fd271fb2dbfb661c261085212182f0 81 Gene3D G3DSA:2.10.70.10 41 81 1.0E-19 T 05-07-2017 AC028_RS13355 1354eb7922cff9916a557b600f4ead5e 501 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 05-07-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AC028_RS13355 1354eb7922cff9916a557b600f4ead5e 501 SUPERFAMILY SSF53720 5 487 4.06E-146 T 05-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AC028_RS13355 1354eb7922cff9916a557b600f4ead5e 501 Gene3D G3DSA:3.40.605.10 7 264 8.9E-98 T 05-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AC028_RS13355 1354eb7922cff9916a557b600f4ead5e 501 Pfam PF00171 Aldehyde dehydrogenase family 22 480 5.4E-143 T 05-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AC028_RS13355 1354eb7922cff9916a557b600f4ead5e 501 Gene3D G3DSA:3.40.309.10 265 445 9.0E-66 T 05-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AC028_RS13355 1354eb7922cff9916a557b600f4ead5e 501 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 8 484 3.0E-222 T 05-07-2017 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 AC028_RS15405 a93808dca67cd04d16c1600eee577564 263 Gene3D G3DSA:2.160.10.10 6 188 2.5E-45 T 05-07-2017 AC028_RS15405 a93808dca67cd04d16c1600eee577564 263 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 261 7.2E-103 T 05-07-2017 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AC028_RS15405 a93808dca67cd04d16c1600eee577564 263 PIRSF PIRSF000456 4 263 1.3E-97 T 05-07-2017 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AC028_RS15405 a93808dca67cd04d16c1600eee577564 263 SUPERFAMILY SSF51161 1 262 2.85E-72 T 05-07-2017 IPR011004 Trimeric LpxA-like AC028_RS15405 a93808dca67cd04d16c1600eee577564 263 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 263 44.846 T 05-07-2017 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AC028_RS15405 a93808dca67cd04d16c1600eee577564 263 Gene3D G3DSA:1.20.1180.10 198 263 3.3E-22 T 05-07-2017 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AC028_RS15405 a93808dca67cd04d16c1600eee577564 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 4.0E-6 T 05-07-2017 IPR001451 Hexapeptide repeat AC028_RS15405 a93808dca67cd04d16c1600eee577564 263 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 260 4.5E-25 T 05-07-2017 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AC028_RS16250 f1cb88dab189ff630a6b0f8f5819c8a3 197 Pfam PF09186 Domain of unknown function (DUF1949) 132 188 1.8E-8 T 05-07-2017 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal AC028_RS16250 f1cb88dab189ff630a6b0f8f5819c8a3 197 Gene3D G3DSA:3.30.70.240 128 195 8.2E-14 T 05-07-2017 IPR000640 Translation elongation factor EFG, V domain AC028_RS16250 f1cb88dab189ff630a6b0f8f5819c8a3 197 SUPERFAMILY SSF54980 128 193 1.15E-10 T 05-07-2017 IPR009022 Elongation factor G, III-V domain AC028_RS16250 f1cb88dab189ff630a6b0f8f5819c8a3 197 SUPERFAMILY SSF54211 6 120 4.55E-38 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS16250 f1cb88dab189ff630a6b0f8f5819c8a3 197 Pfam PF01205 Uncharacterized protein family UPF0029 16 116 7.7E-28 T 05-07-2017 IPR001498 Impact, N-terminal AC028_RS16250 f1cb88dab189ff630a6b0f8f5819c8a3 197 Gene3D G3DSA:3.30.230.30 4 120 3.1E-44 T 05-07-2017 IPR001498 Impact, N-terminal AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 SMART SM00387 390 508 1.6E-24 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 SUPERFAMILY SSF55874 340 506 2.49E-36 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 Gene3D G3DSA:3.30.565.10 349 505 5.2E-35 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 SUPERFAMILY SSF52172 526 645 4.27E-30 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 135 247 1.9E-7 T 05-07-2017 IPR000014 PAS domain AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 Gene3D G3DSA:3.40.50.2300 524 646 5.1E-34 T 05-07-2017 AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 SUPERFAMILY SSF55785 125 235 1.07E-11 T 05-07-2017 IPR000014 PAS domain AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 SMART SM00388 281 349 6.0E-4 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 SUPERFAMILY SSF52172 3 139 5.27E-33 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 SMART SM00448 5 119 2.1E-29 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 SMART SM00448 527 639 2.1E-25 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 Pfam PF08448 PAS fold 143 242 3.3E-10 T 05-07-2017 IPR013656 PAS fold-4 AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 Gene3D G3DSA:1.10.287.130 276 345 9.2E-5 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 Pfam PF00072 Response regulator receiver domain 529 639 1.9E-18 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 Pfam PF00072 Response regulator receiver domain 7 119 2.4E-20 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 348 1.7E-6 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 391 505 8.9E-18 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 486 4.5E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 451 4.5E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 465 4.5E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 505 4.5E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 Gene3D G3DSA:3.30.450.20 129 230 1.6E-12 T 05-07-2017 AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 Gene3D G3DSA:3.40.50.2300 3 128 1.1E-32 T 05-07-2017 AC028_RS13130 a03771877d2c4b3b0426939b949a2515 651 SUPERFAMILY SSF47384 275 347 7.26E-9 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS08070 674005edfa8ad120be8777ff4f41b349 309 SUPERFAMILY SSF111331 3 305 3.49E-66 T 05-07-2017 IPR016064 NAD kinase/diacylglycerol kinase-like domain AC028_RS08070 674005edfa8ad120be8777ff4f41b349 309 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 3 308 49.778 T 05-07-2017 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 AC028_RS08070 674005edfa8ad120be8777ff4f41b349 309 Pfam PF00781 Diacylglycerol kinase catalytic domain 6 129 1.1E-25 T 05-07-2017 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AC028_RS08070 674005edfa8ad120be8777ff4f41b349 309 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 5 307 2.1E-139 T 05-07-2017 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 AC028_RS08070 674005edfa8ad120be8777ff4f41b349 309 SMART SM00046 5 130 8.8E-17 T 05-07-2017 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AC028_RS08070 674005edfa8ad120be8777ff4f41b349 309 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 6 301 2.8E-62 T 05-07-2017 IPR005218 Diacylglycerol/lipid kinase AC028_RS16600 f78a353b0e2489bdfbc9d0a6551da918 317 Pfam PF07920 Protein of unknown function (DUF1684) 174 310 6.0E-43 T 05-07-2017 IPR012467 Protein of unknown function DUF1684 AC028_RS04600 1bb1b143b94f2143a7d6a1122598e7bb 253 Gene3D G3DSA:3.40.50.80 107 245 3.0E-38 T 05-07-2017 AC028_RS04600 1bb1b143b94f2143a7d6a1122598e7bb 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 213 221 1.6E-6 T 05-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AC028_RS04600 1bb1b143b94f2143a7d6a1122598e7bb 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 157 168 1.6E-6 T 05-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AC028_RS04600 1bb1b143b94f2143a7d6a1122598e7bb 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 54 61 1.6E-6 T 05-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AC028_RS04600 1bb1b143b94f2143a7d6a1122598e7bb 253 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 118 137 1.6E-6 T 05-07-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AC028_RS04600 1bb1b143b94f2143a7d6a1122598e7bb 253 Gene3D G3DSA:2.40.30.10 5 106 3.5E-18 T 05-07-2017 AC028_RS04600 1bb1b143b94f2143a7d6a1122598e7bb 253 Pfam PF00970 Oxidoreductase FAD-binding domain 7 106 1.1E-11 T 05-07-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AC028_RS04600 1bb1b143b94f2143a7d6a1122598e7bb 253 SUPERFAMILY SSF63380 4 109 9.32E-19 T 05-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AC028_RS04600 1bb1b143b94f2143a7d6a1122598e7bb 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 101 110 1.9E-6 T 05-07-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 AC028_RS04600 1bb1b143b94f2143a7d6a1122598e7bb 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 213 221 1.9E-6 T 05-07-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 AC028_RS04600 1bb1b143b94f2143a7d6a1122598e7bb 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 34 46 1.9E-6 T 05-07-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 AC028_RS04600 1bb1b143b94f2143a7d6a1122598e7bb 253 PRINTS PR00410 Phenol hydroxylase reductase family signature 145 154 1.9E-6 T 05-07-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 AC028_RS04600 1bb1b143b94f2143a7d6a1122598e7bb 253 SUPERFAMILY SSF52343 112 247 4.85E-33 T 05-07-2017 AC028_RS04600 1bb1b143b94f2143a7d6a1122598e7bb 253 Pfam PF00175 Oxidoreductase NAD-binding domain 119 225 1.8E-17 T 05-07-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AC028_RS16570 0f2dd71e85e3cbf2365536ce11d5d404 236 SMART SM00478 53 200 7.7E-54 T 05-07-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AC028_RS16570 0f2dd71e85e3cbf2365536ce11d5d404 236 Gene3D G3DSA:1.10.1670.10 138 223 7.2E-36 T 05-07-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AC028_RS16570 0f2dd71e85e3cbf2365536ce11d5d404 236 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 49 182 2.3E-18 T 05-07-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AC028_RS16570 0f2dd71e85e3cbf2365536ce11d5d404 236 Gene3D G3DSA:1.10.340.30 38 137 2.1E-33 T 05-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AC028_RS16570 0f2dd71e85e3cbf2365536ce11d5d404 236 Hamap MF_00942 Endonuclease III [nth]. 16 224 37.014 T 05-07-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 AC028_RS16570 0f2dd71e85e3cbf2365536ce11d5d404 236 ProSitePatterns PS01155 Endonuclease III family signature. 117 146 - T 05-07-2017 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AC028_RS16570 0f2dd71e85e3cbf2365536ce11d5d404 236 SUPERFAMILY SSF48150 16 226 4.24E-72 T 05-07-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AC028_RS16570 0f2dd71e85e3cbf2365536ce11d5d404 236 TIGRFAM TIGR01083 nth: endonuclease III 20 209 6.5E-86 T 05-07-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 AC028_RS16570 0f2dd71e85e3cbf2365536ce11d5d404 236 Pfam PF00633 Helix-hairpin-helix motif 114 142 5.5E-8 T 05-07-2017 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AC028_RS16570 0f2dd71e85e3cbf2365536ce11d5d404 236 PIRSF PIRSF001435 14 225 1.2E-48 T 05-07-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 AC028_RS01365 ba37bc1963d04820302fe2a02a381a01 119 SUPERFAMILY SSF52172 3 114 4.13E-21 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS01365 ba37bc1963d04820302fe2a02a381a01 119 Pfam PF00072 Response regulator receiver domain 5 110 7.2E-13 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS01365 ba37bc1963d04820302fe2a02a381a01 119 SMART SM00448 3 110 1.4E-13 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS01365 ba37bc1963d04820302fe2a02a381a01 119 Gene3D G3DSA:3.40.50.2300 2 115 1.5E-20 T 05-07-2017 AC028_RS15570 81efdf11c980e3bcfaad003c16a0c7b6 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 8.2E-11 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS15570 81efdf11c980e3bcfaad003c16a0c7b6 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 8.2E-11 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS15570 81efdf11c980e3bcfaad003c16a0c7b6 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 8.2E-11 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS15570 81efdf11c980e3bcfaad003c16a0c7b6 146 SUPERFAMILY SSF46785 10 145 1.38E-27 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS15570 81efdf11c980e3bcfaad003c16a0c7b6 146 ProSitePatterns PS01117 MarR-type HTH domain signature. 69 103 - T 05-07-2017 IPR023187 Transcriptional regulator MarR-type, conserved site AC028_RS15570 81efdf11c980e3bcfaad003c16a0c7b6 146 Pfam PF01047 MarR family 41 94 1.6E-11 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS15570 81efdf11c980e3bcfaad003c16a0c7b6 146 Gene3D G3DSA:1.10.10.10 10 145 8.8E-29 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS15570 81efdf11c980e3bcfaad003c16a0c7b6 146 SMART SM00347 29 130 5.0E-16 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS17800 1018b86bcc2a6fa01307a686273810bb 431 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 4.7E-94 T 05-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AC028_RS17800 1018b86bcc2a6fa01307a686273810bb 431 PRINTS PR00083 Histidinol dehydrogenase signature 169 195 4.7E-94 T 05-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AC028_RS17800 1018b86bcc2a6fa01307a686273810bb 431 PRINTS PR00083 Histidinol dehydrogenase signature 199 224 4.7E-94 T 05-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AC028_RS17800 1018b86bcc2a6fa01307a686273810bb 431 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 4.7E-94 T 05-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AC028_RS17800 1018b86bcc2a6fa01307a686273810bb 431 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 4.7E-94 T 05-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AC028_RS17800 1018b86bcc2a6fa01307a686273810bb 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 4.7E-94 T 05-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AC028_RS17800 1018b86bcc2a6fa01307a686273810bb 431 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 4.7E-94 T 05-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AC028_RS17800 1018b86bcc2a6fa01307a686273810bb 431 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 4.7E-94 T 05-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AC028_RS17800 1018b86bcc2a6fa01307a686273810bb 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 427 40.989 T 05-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AC028_RS17800 1018b86bcc2a6fa01307a686273810bb 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 426 9.5E-162 T 05-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AC028_RS17800 1018b86bcc2a6fa01307a686273810bb 431 PIRSF PIRSF000099 1 430 1.2E-160 T 05-07-2017 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AC028_RS17800 1018b86bcc2a6fa01307a686273810bb 431 Pfam PF00815 Histidinol dehydrogenase 26 427 6.1E-164 T 05-07-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AC028_RS17800 1018b86bcc2a6fa01307a686273810bb 431 Gene3D G3DSA:3.40.50.1980 29 240 5.6E-74 T 05-07-2017 AC028_RS17800 1018b86bcc2a6fa01307a686273810bb 431 SUPERFAMILY SSF53720 3 427 1.39E-81 T 05-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AC028_RS17800 1018b86bcc2a6fa01307a686273810bb 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 05-07-2017 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 AC028_RS01425 e6f7b9915f9b7c22f672e7270471696e 346 Gene3D G3DSA:1.10.10.10 259 330 7.6E-34 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS01425 e6f7b9915f9b7c22f672e7270471696e 346 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 255 328 5.5E-33 T 05-07-2017 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AC028_RS01425 e6f7b9915f9b7c22f672e7270471696e 346 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 25 328 2.7E-145 T 05-07-2017 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AC028_RS01425 e6f7b9915f9b7c22f672e7270471696e 346 SUPERFAMILY SSF46785 259 332 2.84E-25 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS01425 e6f7b9915f9b7c22f672e7270471696e 346 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 346 179.205 T 05-07-2017 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AC028_RS01425 e6f7b9915f9b7c22f672e7270471696e 346 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 6 237 1.9E-118 T 05-07-2017 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AC028_RS01425 e6f7b9915f9b7c22f672e7270471696e 346 SMART SM00382 53 180 3.4E-12 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS01425 e6f7b9915f9b7c22f672e7270471696e 346 SUPERFAMILY SSF52540 22 254 3.43E-54 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01425 e6f7b9915f9b7c22f672e7270471696e 346 Gene3D G3DSA:3.40.50.300 22 177 1.9E-33 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01425 e6f7b9915f9b7c22f672e7270471696e 346 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 252 334 1.0E-41 T 05-07-2017 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AC028_RS01425 e6f7b9915f9b7c22f672e7270471696e 346 Gene3D G3DSA:1.10.8.60 185 257 7.1E-33 T 05-07-2017 AC028_RS21885 e994df70037c4e96f319fa1b1cdb2ba8 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 3.4E-5 T 05-07-2017 AC028_RS21885 e994df70037c4e96f319fa1b1cdb2ba8 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 410 416 3.4E-5 T 05-07-2017 AC028_RS21885 e994df70037c4e96f319fa1b1cdb2ba8 416 Pfam PF01266 FAD dependent oxidoreductase 7 397 4.8E-60 T 05-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AC028_RS21885 e994df70037c4e96f319fa1b1cdb2ba8 416 Gene3D G3DSA:3.30.9.10 270 311 1.5E-7 T 05-07-2017 AC028_RS21885 e994df70037c4e96f319fa1b1cdb2ba8 416 Gene3D G3DSA:3.30.9.10 144 191 1.5E-7 T 05-07-2017 AC028_RS21885 e994df70037c4e96f319fa1b1cdb2ba8 416 Gene3D G3DSA:3.50.50.60 358 415 6.2E-57 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21885 e994df70037c4e96f319fa1b1cdb2ba8 416 Gene3D G3DSA:3.50.50.60 7 62 6.2E-57 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21885 e994df70037c4e96f319fa1b1cdb2ba8 416 Gene3D G3DSA:3.50.50.60 112 134 6.2E-57 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21885 e994df70037c4e96f319fa1b1cdb2ba8 416 Gene3D G3DSA:3.50.50.60 192 269 6.2E-57 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21885 e994df70037c4e96f319fa1b1cdb2ba8 416 SUPERFAMILY SSF54373 270 356 1.7E-13 T 05-07-2017 AC028_RS21885 e994df70037c4e96f319fa1b1cdb2ba8 416 SUPERFAMILY SSF51905 111 270 5.76E-51 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21885 e994df70037c4e96f319fa1b1cdb2ba8 416 SUPERFAMILY SSF51905 358 415 5.76E-51 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21885 e994df70037c4e96f319fa1b1cdb2ba8 416 SUPERFAMILY SSF51905 7 58 5.76E-51 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS09715 8ee0a1c62a04722babdb5d75d75b56cb 557 ProSitePatterns PS00928 Trehalase signature 2. 450 459 - T 05-07-2017 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AC028_RS09715 8ee0a1c62a04722babdb5d75d75b56cb 557 ProSitePatterns PS00927 Trehalase signature 1. 155 168 - T 05-07-2017 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AC028_RS09715 8ee0a1c62a04722babdb5d75d75b56cb 557 Pfam PF01204 Trehalase 62 536 7.1E-169 T 05-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AC028_RS09715 8ee0a1c62a04722babdb5d75d75b56cb 557 Hamap MF_01060 Periplasmic trehalase [treA]. 1 538 84.016 T 05-07-2017 IPR023720 Trehalase, periplasmic GO:0004555|GO:0005993|GO:0042597|GO:0071474 KEGG: 00500+3.2.1.28 AC028_RS09715 8ee0a1c62a04722babdb5d75d75b56cb 557 SUPERFAMILY SSF48208 45 536 5.1E-157 T 05-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AC028_RS09715 8ee0a1c62a04722babdb5d75d75b56cb 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 306 323 1.5E-41 T 05-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AC028_RS09715 8ee0a1c62a04722babdb5d75d75b56cb 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 272 289 1.5E-41 T 05-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AC028_RS09715 8ee0a1c62a04722babdb5d75d75b56cb 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 338 355 1.5E-41 T 05-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AC028_RS09715 8ee0a1c62a04722babdb5d75d75b56cb 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 443 459 1.5E-41 T 05-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AC028_RS09715 8ee0a1c62a04722babdb5d75d75b56cb 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 197 215 1.5E-41 T 05-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AC028_RS09715 8ee0a1c62a04722babdb5d75d75b56cb 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 520 533 1.5E-41 T 05-07-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AC028_RS21185 61598241741264978efd1a4dca553445 418 Gene3D G3DSA:3.40.50.2000 1 251 4.3E-14 T 05-07-2017 AC028_RS21185 61598241741264978efd1a4dca553445 418 Gene3D G3DSA:3.40.50.2000 252 377 4.5E-16 T 05-07-2017 AC028_RS21185 61598241741264978efd1a4dca553445 418 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 299 377 1.1E-10 T 05-07-2017 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 AC028_RS21185 61598241741264978efd1a4dca553445 418 SUPERFAMILY SSF53756 1 411 1.67E-63 T 05-07-2017 AC028_RS02855 8e697ffc602546da631d43257bd9206e 333 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 8 316 8.6E-126 T 05-07-2017 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AC028_RS02855 8e697ffc602546da631d43257bd9206e 333 SUPERFAMILY SSF48179 173 320 9.86E-67 T 05-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AC028_RS02855 8e697ffc602546da631d43257bd9206e 333 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 8 166 1.3E-69 T 05-07-2017 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AC028_RS02855 8e697ffc602546da631d43257bd9206e 333 Gene3D G3DSA:1.10.1040.10 19 314 1.8E-107 T 05-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AC028_RS02855 8e697ffc602546da631d43257bd9206e 333 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 318 41.658 T 05-07-2017 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AC028_RS02855 8e697ffc602546da631d43257bd9206e 333 SUPERFAMILY SSF51735 7 172 2.57E-63 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS02855 8e697ffc602546da631d43257bd9206e 333 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 173 316 1.0E-61 T 05-07-2017 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AC028_RS20655 98f29ee85229a61de12ebee1d8526ef9 455 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 255 292 - T 05-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AC028_RS20655 98f29ee85229a61de12ebee1d8526ef9 455 Pfam PF00202 Aminotransferase class-III 33 442 2.7E-99 T 05-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AC028_RS20655 98f29ee85229a61de12ebee1d8526ef9 455 SUPERFAMILY SSF53383 12 447 9.79E-116 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS20655 98f29ee85229a61de12ebee1d8526ef9 455 Gene3D G3DSA:3.90.1150.10 344 450 3.4E-43 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS20655 98f29ee85229a61de12ebee1d8526ef9 455 Gene3D G3DSA:3.90.1150.10 8 67 3.4E-43 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS20655 98f29ee85229a61de12ebee1d8526ef9 455 Gene3D G3DSA:3.40.640.10 69 342 3.0E-77 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS06280 55884d58daad6d34a7e927d703f13f7d 276 Pfam PF12146 Serine aminopeptidase, S33 18 255 2.8E-25 T 05-07-2017 IPR022742 Serine aminopeptidase, S33 AC028_RS06280 55884d58daad6d34a7e927d703f13f7d 276 Gene3D G3DSA:3.40.50.1820 5 274 1.3E-37 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS06280 55884d58daad6d34a7e927d703f13f7d 276 SUPERFAMILY SSF53474 1 274 2.7E-38 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS06280 55884d58daad6d34a7e927d703f13f7d 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 2.0E-5 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS06280 55884d58daad6d34a7e927d703f13f7d 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 215 229 2.0E-5 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS06280 55884d58daad6d34a7e927d703f13f7d 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 59 74 2.0E-5 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS06280 55884d58daad6d34a7e927d703f13f7d 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 2.0E-5 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS16280 4ecbd37490afffe82757729aadfad668 502 Gene3D G3DSA:2.60.120.650 31 239 2.7E-38 T 05-07-2017 AC028_RS16280 4ecbd37490afffe82757729aadfad668 502 Pfam PF08007 Cupin superfamily protein 33 345 1.6E-101 T 05-07-2017 IPR003347 JmjC domain AC028_RS16280 4ecbd37490afffe82757729aadfad668 502 SUPERFAMILY SSF51197 30 325 3.57E-67 T 05-07-2017 AC028_RS16280 4ecbd37490afffe82757729aadfad668 502 SMART SM00558 120 249 2.7E-4 T 05-07-2017 IPR003347 JmjC domain AC028_RS10770 8d72acf4e9921c591785a4b6e3ec21fb 244 Pfam PF13649 Methyltransferase domain 34 125 7.8E-12 T 05-07-2017 AC028_RS10770 8d72acf4e9921c591785a4b6e3ec21fb 244 SUPERFAMILY SSF53335 2 233 3.22E-26 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS10770 8d72acf4e9921c591785a4b6e3ec21fb 244 Gene3D G3DSA:3.40.50.150 191 218 1.2E-23 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS10770 8d72acf4e9921c591785a4b6e3ec21fb 244 Gene3D G3DSA:3.40.50.150 2 154 1.2E-23 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS05150 1e2d7ba5569a91088cd69b4a47a1e3ed 355 Gene3D G3DSA:3.40.50.2300 75 196 2.0E-18 T 05-07-2017 AC028_RS05150 1e2d7ba5569a91088cd69b4a47a1e3ed 355 Pfam PF00356 Bacterial regulatory proteins, lacI family 24 69 5.7E-19 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS05150 1e2d7ba5569a91088cd69b4a47a1e3ed 355 SMART SM00354 22 92 5.1E-25 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS05150 1e2d7ba5569a91088cd69b4a47a1e3ed 355 Gene3D G3DSA:3.40.50.2300 197 328 3.6E-47 T 05-07-2017 AC028_RS05150 1e2d7ba5569a91088cd69b4a47a1e3ed 355 SUPERFAMILY SSF47413 22 80 1.48E-16 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS05150 1e2d7ba5569a91088cd69b4a47a1e3ed 355 SUPERFAMILY SSF53822 83 353 3.46E-61 T 05-07-2017 IPR028082 Periplasmic binding protein-like I AC028_RS05150 1e2d7ba5569a91088cd69b4a47a1e3ed 355 Pfam PF13377 Periplasmic binding protein-like domain 191 350 1.8E-35 T 05-07-2017 AC028_RS05150 1e2d7ba5569a91088cd69b4a47a1e3ed 355 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 34 44 1.9E-5 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS05150 1e2d7ba5569a91088cd69b4a47a1e3ed 355 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 24 34 1.9E-5 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS05150 1e2d7ba5569a91088cd69b4a47a1e3ed 355 ProSitePatterns PS00356 LacI-type HTH domain signature. 25 43 - T 05-07-2017 AC028_RS05150 1e2d7ba5569a91088cd69b4a47a1e3ed 355 Gene3D G3DSA:1.10.260.40 23 74 3.2E-23 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS14795 9ee1aea77a856721ef80464f7215415f 266 Pfam PF00119 ATP synthase A chain 39 260 2.5E-55 T 05-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 AC028_RS14795 9ee1aea77a856721ef80464f7215415f 266 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 266 15.037 T 05-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 AC028_RS14795 9ee1aea77a856721ef80464f7215415f 266 Gene3D G3DSA:1.20.120.220 89 266 5.1E-48 T 05-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 AC028_RS14795 9ee1aea77a856721ef80464f7215415f 266 SUPERFAMILY SSF81336 88 260 5.49E-39 T 05-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 AC028_RS14795 9ee1aea77a856721ef80464f7215415f 266 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 32 260 5.5E-42 T 05-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 AC028_RS14795 9ee1aea77a856721ef80464f7215415f 266 ProSitePatterns PS00449 ATP synthase a subunit signature. 196 205 - T 05-07-2017 IPR023011 ATPase, F0 complex, subunit A, active site Reactome: R-HSA-163210 AC028_RS14795 9ee1aea77a856721ef80464f7215415f 266 PRINTS PR00123 ATP synthase A subunit signature 246 261 1.0E-12 T 05-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 AC028_RS14795 9ee1aea77a856721ef80464f7215415f 266 PRINTS PR00123 ATP synthase A subunit signature 96 112 1.0E-12 T 05-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 AC028_RS14795 9ee1aea77a856721ef80464f7215415f 266 PRINTS PR00123 ATP synthase A subunit signature 193 215 1.0E-12 T 05-07-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 AC028_RS09770 e8f1c97f5237824be3b8fe8228009417 474 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 35 342 2.2E-58 T 05-07-2017 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 AC028_RS09770 e8f1c97f5237824be3b8fe8228009417 474 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 174 183 - T 05-07-2017 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 AC028_RS09770 e8f1c97f5237824be3b8fe8228009417 474 SMART SM00637 394 474 4.6E-13 T 05-07-2017 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AC028_RS09770 e8f1c97f5237824be3b8fe8228009417 474 Gene3D G3DSA:3.20.20.80 22 368 1.3E-108 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS09770 e8f1c97f5237824be3b8fe8228009417 474 SUPERFAMILY SSF51445 22 372 2.35E-83 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS09770 e8f1c97f5237824be3b8fe8228009417 474 Gene3D G3DSA:2.60.40.290 394 473 5.0E-21 T 05-07-2017 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain GO:0004553|GO:0030247 AC028_RS09770 e8f1c97f5237824be3b8fe8228009417 474 Pfam PF00553 Cellulose binding domain 398 472 9.1E-16 T 05-07-2017 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 AC028_RS09770 e8f1c97f5237824be3b8fe8228009417 474 SUPERFAMILY SSF49384 388 473 1.6E-21 T 05-07-2017 IPR008965 Carbohydrate-binding domain GO:0030246 AC028_RS19190 7ad57e77aaede9e2e7a28cc0591fbfaf 345 SUPERFAMILY SSF52540 52 201 3.64E-12 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19190 7ad57e77aaede9e2e7a28cc0591fbfaf 345 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 30 325 2.4E-66 T 05-07-2017 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AC028_RS19190 7ad57e77aaede9e2e7a28cc0591fbfaf 345 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 7 341 37.226 T 05-07-2017 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AC028_RS19190 7ad57e77aaede9e2e7a28cc0591fbfaf 345 Gene3D G3DSA:3.40.50.300 52 152 4.9E-6 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19190 7ad57e77aaede9e2e7a28cc0591fbfaf 345 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 23 336 5.7E-105 T 05-07-2017 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AC028_RS02735 9935cfbf04e535a1d28b6830a7a962b8 408 Pfam PF00202 Aminotransferase class-III 21 400 1.8E-116 T 05-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AC028_RS02735 9935cfbf04e535a1d28b6830a7a962b8 408 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 401 7.4E-141 T 05-07-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AC028_RS02735 9935cfbf04e535a1d28b6830a7a962b8 408 Gene3D G3DSA:3.40.640.10 59 303 1.0E-89 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS02735 9935cfbf04e535a1d28b6830a7a962b8 408 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 12 402 45.152 T 05-07-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AC028_RS02735 9935cfbf04e535a1d28b6830a7a962b8 408 SUPERFAMILY SSF53383 13 401 3.23E-123 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS02735 9935cfbf04e535a1d28b6830a7a962b8 408 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 224 261 - T 05-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AC028_RS02735 9935cfbf04e535a1d28b6830a7a962b8 408 Gene3D G3DSA:3.90.1150.10 14 58 8.2E-33 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS02735 9935cfbf04e535a1d28b6830a7a962b8 408 Gene3D G3DSA:3.90.1150.10 308 403 8.2E-33 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS10490 c42933f59ac6df3be0ef422e8cb8c50c 154 SUPERFAMILY SSF52121 4 153 2.09E-53 T 05-07-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AC028_RS10490 c42933f59ac6df3be0ef422e8cb8c50c 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 28.438 T 05-07-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AC028_RS10490 c42933f59ac6df3be0ef422e8cb8c50c 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 149 4.2E-43 T 05-07-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AC028_RS10490 c42933f59ac6df3be0ef422e8cb8c50c 154 Gene3D G3DSA:3.40.50.960 2 151 9.7E-58 T 05-07-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AC028_RS10490 c42933f59ac6df3be0ef422e8cb8c50c 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 150 1.1E-50 T 05-07-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AC028_RS15390 9cfa06602ce16cb822eb89927d7bd372 1196 Pfam PF14579 Helix-hairpin-helix motif 823 912 2.6E-26 T 05-07-2017 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS15390 9cfa06602ce16cb822eb89927d7bd372 1196 SUPERFAMILY SSF50249 1028 1098 4.57E-5 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS15390 9cfa06602ce16cb822eb89927d7bd372 1196 Pfam PF02811 PHP domain 8 184 8.1E-25 T 05-07-2017 IPR004013 PHP domain GO:0003824 AC028_RS15390 9cfa06602ce16cb822eb89927d7bd372 1196 Pfam PF01336 OB-fold nucleic acid binding domain 1030 1098 3.5E-8 T 05-07-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AC028_RS15390 9cfa06602ce16cb822eb89927d7bd372 1196 SUPERFAMILY SSF160975 839 888 3.53E-5 T 05-07-2017 AC028_RS15390 9cfa06602ce16cb822eb89927d7bd372 1196 SMART SM00481 7 88 2.7E-16 T 05-07-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 AC028_RS15390 9cfa06602ce16cb822eb89927d7bd372 1196 Gene3D G3DSA:1.10.150.280 848 894 8.6E-7 T 05-07-2017 AC028_RS15390 9cfa06602ce16cb822eb89927d7bd372 1196 Gene3D G3DSA:2.40.50.140 1028 1098 7.9E-4 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS15390 9cfa06602ce16cb822eb89927d7bd372 1196 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 994 0.0 T 05-07-2017 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS15390 9cfa06602ce16cb822eb89927d7bd372 1196 SUPERFAMILY SSF89550 6 249 1.8E-9 T 05-07-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AC028_RS15390 9cfa06602ce16cb822eb89927d7bd372 1196 Gene3D G3DSA:3.20.20.140 6 268 4.3E-16 T 05-07-2017 AC028_RS15390 9cfa06602ce16cb822eb89927d7bd372 1196 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 304 748 1.8E-166 T 05-07-2017 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS21585 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 SUPERFAMILY SSF54862 36 145 6.28E-25 T 05-07-2017 AC028_RS21585 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 Pfam PF12838 4Fe-4S dicluster domain 62 115 6.0E-12 T 05-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AC028_RS21585 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 Gene3D G3DSA:1.10.1060.10 19 128 1.1E-20 T 05-07-2017 AC028_RS21585 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 139 4.1E-44 T 05-07-2017 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21585 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 05-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AC028_RS21585 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 05-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AC028_RS21585 b1b6f45e9d96ef73a1c6a09e8900a5f4 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 159 26.491 T 05-07-2017 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS08390 1ec31d7fda7d7ff0716ab8e9006ada4d 595 Pfam PF13205 Bacterial Ig-like domain 205 304 1.9E-14 T 05-07-2017 IPR032812 SbsA, Ig-like domain AC028_RS08390 1ec31d7fda7d7ff0716ab8e9006ada4d 595 Pfam PF04231 Endonuclease I 324 576 4.9E-37 T 05-07-2017 IPR007346 Endonuclease I GO:0004518 AC028_RS08390 1ec31d7fda7d7ff0716ab8e9006ada4d 595 SUPERFAMILY SSF54060 318 509 8.83E-45 T 05-07-2017 AC028_RS08390 1ec31d7fda7d7ff0716ab8e9006ada4d 595 SUPERFAMILY SSF54060 538 576 8.83E-45 T 05-07-2017 AC028_RS08390 1ec31d7fda7d7ff0716ab8e9006ada4d 595 Pfam PF00932 Lamin Tail Domain 25 133 2.4E-7 T 05-07-2017 IPR001322 Lamin Tail Domain AC028_RS21595 2ee435e89f28dd605cf7533eb0492474 744 Gene3D G3DSA:3.10.20.30 14 67 2.3E-5 T 05-07-2017 IPR012675 Beta-grasp domain AC028_RS21595 2ee435e89f28dd605cf7533eb0492474 744 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 96 133 6.5E-16 T 05-07-2017 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21595 2ee435e89f28dd605cf7533eb0492474 744 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 44 61 - T 05-07-2017 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21595 2ee435e89f28dd605cf7533eb0492474 744 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 17 607 9.0E-206 T 05-07-2017 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21595 2ee435e89f28dd605cf7533eb0492474 744 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 14 89 1.2E-18 T 05-07-2017 AC028_RS21595 2ee435e89f28dd605cf7533eb0492474 744 SUPERFAMILY SSF54862 89 223 2.01E-36 T 05-07-2017 AC028_RS21595 2ee435e89f28dd605cf7533eb0492474 744 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 111 123 - T 05-07-2017 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21595 2ee435e89f28dd605cf7533eb0492474 744 Pfam PF01568 Molydopterin dinucleotide binding domain 676 730 1.5E-11 T 05-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AC028_RS21595 2ee435e89f28dd605cf7533eb0492474 744 SMART SM00929 96 136 2.5E-19 T 05-07-2017 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21595 2ee435e89f28dd605cf7533eb0492474 744 SUPERFAMILY SSF54292 15 87 7.18E-19 T 05-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AC028_RS21595 2ee435e89f28dd605cf7533eb0492474 744 SUPERFAMILY SSF50692 677 735 1.81E-12 T 05-07-2017 IPR009010 Aspartate decarboxylase-like domain AC028_RS21595 2ee435e89f28dd605cf7533eb0492474 744 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 158 168 - T 05-07-2017 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21595 2ee435e89f28dd605cf7533eb0492474 744 Gene3D G3DSA:2.40.40.20 674 729 1.6E-11 T 05-07-2017 AC028_RS21595 2ee435e89f28dd605cf7533eb0492474 744 Gene3D G3DSA:3.40.50.740 287 420 7.6E-26 T 05-07-2017 AC028_RS21595 2ee435e89f28dd605cf7533eb0492474 744 Gene3D G3DSA:3.40.50.740 496 620 7.6E-26 T 05-07-2017 AC028_RS21595 2ee435e89f28dd605cf7533eb0492474 744 SUPERFAMILY SSF53706 226 625 6.89E-73 T 05-07-2017 AC028_RS21595 2ee435e89f28dd605cf7533eb0492474 744 Pfam PF00384 Molybdopterin oxidoreductase 285 415 7.9E-17 T 05-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21595 2ee435e89f28dd605cf7533eb0492474 744 Pfam PF00384 Molybdopterin oxidoreductase 447 607 5.0E-8 T 05-07-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS18590 52ca69de7de27f3a67ae378750f66e9a 399 Pfam PF00700 Bacterial flagellin C-terminal helical region 313 398 7.0E-29 T 05-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AC028_RS18590 52ca69de7de27f3a67ae378750f66e9a 399 PRINTS PR00207 Flagellin signature 37 54 8.5E-27 T 05-07-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AC028_RS18590 52ca69de7de27f3a67ae378750f66e9a 399 PRINTS PR00207 Flagellin signature 76 95 8.5E-27 T 05-07-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AC028_RS18590 52ca69de7de27f3a67ae378750f66e9a 399 PRINTS PR00207 Flagellin signature 111 134 8.5E-27 T 05-07-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AC028_RS18590 52ca69de7de27f3a67ae378750f66e9a 399 Pfam PF07196 Flagellin hook IN motif 198 258 1.4E-6 T 05-07-2017 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AC028_RS18590 52ca69de7de27f3a67ae378750f66e9a 399 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 9.6E-46 T 05-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AC028_RS18590 52ca69de7de27f3a67ae378750f66e9a 399 Gene3D G3DSA:1.20.1330.10 54 172 6.2E-58 T 05-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AC028_RS18590 52ca69de7de27f3a67ae378750f66e9a 399 Gene3D G3DSA:1.20.1330.10 301 355 6.2E-58 T 05-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AC028_RS18590 52ca69de7de27f3a67ae378750f66e9a 399 SUPERFAMILY SSF64518 1 399 9.94E-103 T 05-07-2017 AC028_RS08580 b9d111d3c1016cd65d1f5ad64f4176c9 802 SMART SM00487 46 250 1.7E-29 T 05-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_RS08580 b9d111d3c1016cd65d1f5ad64f4176c9 802 Gene3D G3DSA:3.40.50.300 277 406 8.4E-24 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS08580 b9d111d3c1016cd65d1f5ad64f4176c9 802 SMART SM00490 296 384 9.1E-17 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS08580 b9d111d3c1016cd65d1f5ad64f4176c9 802 Pfam PF00270 DEAD/DEAH box helicase 52 220 6.7E-27 T 05-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AC028_RS08580 b9d111d3c1016cd65d1f5ad64f4176c9 802 Pfam PF00271 Helicase conserved C-terminal domain 279 383 1.5E-14 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS08580 b9d111d3c1016cd65d1f5ad64f4176c9 802 Gene3D G3DSA:3.40.50.300 35 222 6.3E-33 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS08580 b9d111d3c1016cd65d1f5ad64f4176c9 802 SUPERFAMILY SSF52540 62 222 9.02E-47 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS08580 b9d111d3c1016cd65d1f5ad64f4176c9 802 SUPERFAMILY SSF52540 251 390 9.02E-47 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS08580 b9d111d3c1016cd65d1f5ad64f4176c9 802 Pfam PF09369 Domain of unknown function (DUF1998) 647 753 1.6E-10 T 05-07-2017 IPR018973 DEAD/DEAH-box helicase, putative AC028_RS04690 bda546f6d98dd5d0d27846f8d519cecd 603 SUPERFAMILY SSF51735 402 535 3.33E-31 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS04690 bda546f6d98dd5d0d27846f8d519cecd 603 Pfam PF02254 TrkA-N domain 404 513 3.1E-27 T 05-07-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AC028_RS04690 bda546f6d98dd5d0d27846f8d519cecd 603 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 282 3.2E-77 T 05-07-2017 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AC028_RS04690 bda546f6d98dd5d0d27846f8d519cecd 603 Pfam PF00999 Sodium/hydrogen exchanger family 10 371 8.9E-62 T 05-07-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AC028_RS04690 bda546f6d98dd5d0d27846f8d519cecd 603 Gene3D G3DSA:3.40.50.720 398 531 7.8E-36 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS20235 f43d53109aeb478b4b52d1e1fd4fddb6 556 Pfam PF00295 Glycosyl hydrolases family 28 115 446 1.9E-41 T 05-07-2017 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 AC028_RS20235 f43d53109aeb478b4b52d1e1fd4fddb6 556 SUPERFAMILY SSF51126 85 263 4.81E-54 T 05-07-2017 IPR011050 Pectin lyase fold/virulence factor AC028_RS20235 f43d53109aeb478b4b52d1e1fd4fddb6 556 SUPERFAMILY SSF51126 293 487 4.81E-54 T 05-07-2017 IPR011050 Pectin lyase fold/virulence factor AC028_RS20235 f43d53109aeb478b4b52d1e1fd4fddb6 556 Gene3D G3DSA:2.160.20.10 77 486 5.9E-85 T 05-07-2017 IPR012334 Pectin lyase fold AC028_RS17685 8ef5c640d307624655b5fdb4e34e3afe 243 SMART SM00014 104 213 9.8E-17 T 05-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AC028_RS17685 8ef5c640d307624655b5fdb4e34e3afe 243 Pfam PF01569 PAP2 superfamily 108 217 5.4E-20 T 05-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AC028_RS17685 8ef5c640d307624655b5fdb4e34e3afe 243 Gene3D G3DSA:1.20.144.10 52 217 5.4E-29 T 05-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AC028_RS17685 8ef5c640d307624655b5fdb4e34e3afe 243 SUPERFAMILY SSF48317 31 228 3.01E-37 T 05-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AC028_RS05840 1aab74d5c25359e53d8dce2b25a671e1 342 Gene3D G3DSA:3.40.50.720 144 309 8.9E-62 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS05840 1aab74d5c25359e53d8dce2b25a671e1 342 SMART SM00829 20 339 1.8E-6 T 05-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AC028_RS05840 1aab74d5c25359e53d8dce2b25a671e1 342 SUPERFAMILY SSF50129 5 146 1.1E-37 T 05-07-2017 IPR011032 GroES-like AC028_RS05840 1aab74d5c25359e53d8dce2b25a671e1 342 Gene3D G3DSA:3.90.180.10 2 143 6.1E-53 T 05-07-2017 IPR011032 GroES-like AC028_RS05840 1aab74d5c25359e53d8dce2b25a671e1 342 SUPERFAMILY SSF51735 127 305 5.15E-43 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS05840 1aab74d5c25359e53d8dce2b25a671e1 342 Pfam PF16884 N-terminal domain of oxidoreductase 7 109 1.7E-35 T 05-07-2017 AC028_RS05840 1aab74d5c25359e53d8dce2b25a671e1 342 Pfam PF00107 Zinc-binding dehydrogenase 161 298 8.5E-19 T 05-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AC028_RS19285 a3e8c702dd75fce5ba5f814060281de4 328 Pfam PF00849 RNA pseudouridylate synthase 109 262 4.4E-27 T 05-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS19285 a3e8c702dd75fce5ba5f814060281de4 328 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 146 160 - T 05-07-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS19285 a3e8c702dd75fce5ba5f814060281de4 328 SMART SM00363 28 90 8.3E-6 T 05-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AC028_RS19285 a3e8c702dd75fce5ba5f814060281de4 328 SUPERFAMILY SSF55120 97 327 2.72E-56 T 05-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS19285 a3e8c702dd75fce5ba5f814060281de4 328 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 24 326 3.2E-73 T 05-07-2017 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS19285 a3e8c702dd75fce5ba5f814060281de4 328 Pfam PF01479 S4 domain 28 74 1.9E-8 T 05-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AC028_RS19285 a3e8c702dd75fce5ba5f814060281de4 328 SUPERFAMILY SSF55174 27 78 1.13E-8 T 05-07-2017 AC028_RS19285 a3e8c702dd75fce5ba5f814060281de4 328 Gene3D G3DSA:3.10.290.10 28 76 7.0E-7 T 05-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AC028_RS10025 6ddf67ac54244a7ac4ac46fc8f421204 382 SUPERFAMILY SSF53955 73 376 6.0E-84 T 05-07-2017 IPR023346 Lysozyme-like domain AC028_RS10025 6ddf67ac54244a7ac4ac46fc8f421204 382 Pfam PF13406 Transglycosylase SLT domain 71 372 9.9E-92 T 05-07-2017 IPR031304 Transglycosylase SLT domain 2 AC028_RS10025 6ddf67ac54244a7ac4ac46fc8f421204 382 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 73 374 1.2E-125 T 05-07-2017 IPR011757 Lytic transglycosylase MltB AC028_RS10025 6ddf67ac54244a7ac4ac46fc8f421204 382 Gene3D G3DSA:1.10.530.10 112 168 2.7E-55 T 05-07-2017 AC028_RS10025 6ddf67ac54244a7ac4ac46fc8f421204 382 Gene3D G3DSA:1.10.530.10 262 377 2.7E-55 T 05-07-2017 AC028_RS18170 9d0d4f75ebb9d78aac84fee3548f52b9 516 SUPERFAMILY SSF58104 179 461 3.27E-73 T 05-07-2017 AC028_RS18170 9d0d4f75ebb9d78aac84fee3548f52b9 516 Gene3D G3DSA:1.10.287.950 227 431 1.3E-62 T 05-07-2017 AC028_RS18170 9d0d4f75ebb9d78aac84fee3548f52b9 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 387 416 5.6E-43 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18170 9d0d4f75ebb9d78aac84fee3548f52b9 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 339 368 5.6E-43 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18170 9d0d4f75ebb9d78aac84fee3548f52b9 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 310 337 5.6E-43 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18170 9d0d4f75ebb9d78aac84fee3548f52b9 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 19 5.6E-43 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18170 9d0d4f75ebb9d78aac84fee3548f52b9 516 SMART SM00283 212 459 3.2E-89 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18170 9d0d4f75ebb9d78aac84fee3548f52b9 516 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 264 458 2.9E-64 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS07830 c443233a64033919d6425a68188f1745 485 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 12 473 6.8E-141 T 05-07-2017 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AC028_RS07830 c443233a64033919d6425a68188f1745 485 Hamap MF_00484 Glycogen synthase [glgA]. 9 474 38.183 T 05-07-2017 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AC028_RS07830 c443233a64033919d6425a68188f1745 485 Pfam PF00534 Glycosyl transferases group 1 296 434 9.3E-14 T 05-07-2017 IPR001296 Glycosyl transferase, family 1 AC028_RS07830 c443233a64033919d6425a68188f1745 485 SUPERFAMILY SSF53756 12 478 3.31E-100 T 05-07-2017 AC028_RS07830 c443233a64033919d6425a68188f1745 485 Pfam PF08323 Starch synthase catalytic domain 12 242 4.3E-62 T 05-07-2017 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AC028_RS07830 c443233a64033919d6425a68188f1745 485 Gene3D G3DSA:3.40.50.2000 259 454 3.6E-65 T 05-07-2017 AC028_RS08270 cb1540fb811d1d3b92461d54af10323e 586 SUPERFAMILY SSF53474 6 283 3.3E-31 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS08270 cb1540fb811d1d3b92461d54af10323e 586 Pfam PF12147 Putative methyltransferase 275 583 1.7E-155 T 05-07-2017 IPR022744 Methyltransferase domain, putative AC028_RS08270 cb1540fb811d1d3b92461d54af10323e 586 Pfam PF12146 Serine aminopeptidase, S33 35 267 1.1E-66 T 05-07-2017 IPR022742 Serine aminopeptidase, S33 AC028_RS08270 cb1540fb811d1d3b92461d54af10323e 586 Gene3D G3DSA:3.40.50.150 393 567 1.3E-11 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS08270 cb1540fb811d1d3b92461d54af10323e 586 Gene3D G3DSA:3.40.50.1820 13 280 4.9E-35 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS08270 cb1540fb811d1d3b92461d54af10323e 586 SUPERFAMILY SSF53335 381 568 7.83E-20 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS08555 4da552450b3bcf15c016c084af75a2ea 871 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 40 870 9.0E-190 T 05-07-2017 IPR010104 Bacterial TonB-dependent receptor AC028_RS08555 4da552450b3bcf15c016c084af75a2ea 871 Pfam PF00593 TonB dependent receptor 592 870 1.4E-27 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS08555 4da552450b3bcf15c016c084af75a2ea 871 Gene3D G3DSA:2.170.130.10 60 167 1.2E-17 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS08555 4da552450b3bcf15c016c084af75a2ea 871 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 165 8.5E-15 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS08555 4da552450b3bcf15c016c084af75a2ea 871 SUPERFAMILY SSF56935 516 870 7.33E-75 T 05-07-2017 AC028_RS08555 4da552450b3bcf15c016c084af75a2ea 871 SUPERFAMILY SSF56935 276 474 7.33E-75 T 05-07-2017 AC028_RS08555 4da552450b3bcf15c016c084af75a2ea 871 SUPERFAMILY SSF56935 36 237 7.33E-75 T 05-07-2017 AC028_RS08555 4da552450b3bcf15c016c084af75a2ea 871 Gene3D G3DSA:2.40.170.20 168 323 1.6E-57 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS08555 4da552450b3bcf15c016c084af75a2ea 871 Gene3D G3DSA:2.40.170.20 378 481 1.6E-57 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS08555 4da552450b3bcf15c016c084af75a2ea 871 Gene3D G3DSA:2.40.170.20 518 870 1.6E-57 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS19125 78481135b48008786e990837a2ea76fb 128 Gene3D G3DSA:1.20.1300.10 11 122 1.1E-26 T 05-07-2017 AC028_RS19125 78481135b48008786e990837a2ea76fb 128 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 17 120 1.5E-28 T 05-07-2017 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AC028_RS19125 78481135b48008786e990837a2ea76fb 128 SUPERFAMILY SSF81343 12 123 6.1E-25 T 05-07-2017 AC028_RS19125 78481135b48008786e990837a2ea76fb 128 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 116 3.7E-15 T 05-07-2017 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AC028_RS19440 4f9ce5453ac7e2231bdfab280dfc36e9 258 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 7 211 2.4E-26 T 05-07-2017 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AC028_RS19440 4f9ce5453ac7e2231bdfab280dfc36e9 258 SUPERFAMILY SSF53850 3 210 1.23E-29 T 05-07-2017 AC028_RS19440 4f9ce5453ac7e2231bdfab280dfc36e9 258 Gene3D G3DSA:3.40.190.100 90 212 1.7E-15 T 05-07-2017 AC028_RS19440 4f9ce5453ac7e2231bdfab280dfc36e9 258 Gene3D G3DSA:3.40.190.10 6 86 1.4E-5 T 05-07-2017 AC028_RS12715 704bf3c417c6d1b64ca9c878697199f9 1065 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 31 897 1.1E-155 T 05-07-2017 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS12715 704bf3c417c6d1b64ca9c878697199f9 1065 Gene3D G3DSA:3.20.20.140 31 229 2.8E-8 T 05-07-2017 AC028_RS12715 704bf3c417c6d1b64ca9c878697199f9 1065 SUPERFAMILY SSF89550 30 108 1.92E-9 T 05-07-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AC028_RS12715 704bf3c417c6d1b64ca9c878697199f9 1065 SUPERFAMILY SSF89550 148 217 1.92E-9 T 05-07-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AC028_RS12715 704bf3c417c6d1b64ca9c878697199f9 1065 Pfam PF14579 Helix-hairpin-helix motif 801 897 1.3E-20 T 05-07-2017 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS12715 704bf3c417c6d1b64ca9c878697199f9 1065 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 30 1065 13.066 T 05-07-2017 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS12715 704bf3c417c6d1b64ca9c878697199f9 1065 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 298 721 2.5E-145 T 05-07-2017 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS12715 704bf3c417c6d1b64ca9c878697199f9 1065 Pfam PF02811 PHP domain 32 124 9.5E-14 T 05-07-2017 IPR004013 PHP domain GO:0003824 AC028_RS12715 704bf3c417c6d1b64ca9c878697199f9 1065 SMART SM00481 31 98 4.1E-11 T 05-07-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 AC028_RS07280 0db41d8c51c2a659be19af2d9a94cd5d 306 SUPERFAMILY SSF52151 178 299 2.09E-42 T 05-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AC028_RS07280 0db41d8c51c2a659be19af2d9a94cd5d 306 SUPERFAMILY SSF52151 3 116 2.09E-42 T 05-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AC028_RS07280 0db41d8c51c2a659be19af2d9a94cd5d 306 SUPERFAMILY SSF55048 124 185 2.75E-9 T 05-07-2017 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 AC028_RS07280 0db41d8c51c2a659be19af2d9a94cd5d 306 Gene3D G3DSA:3.30.70.250 121 184 2.2E-10 T 05-07-2017 AC028_RS07280 0db41d8c51c2a659be19af2d9a94cd5d 306 Gene3D G3DSA:3.40.366.10 185 288 2.4E-39 T 05-07-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AC028_RS07280 0db41d8c51c2a659be19af2d9a94cd5d 306 Gene3D G3DSA:3.40.366.10 3 116 2.4E-39 T 05-07-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AC028_RS07280 0db41d8c51c2a659be19af2d9a94cd5d 306 TIGRFAM TIGR03131 malonate_mdcH: malonate decarboxylase, epsilon subunit 4 298 2.1E-103 T 05-07-2017 IPR017554 Malonate decarboxylase, McdH subunit AC028_RS07280 0db41d8c51c2a659be19af2d9a94cd5d 306 Pfam PF00698 Acyl transferase domain 6 277 1.7E-21 T 05-07-2017 IPR014043 Acyl transferase AC028_RS07280 0db41d8c51c2a659be19af2d9a94cd5d 306 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 306 1.9E-16 T 05-07-2017 IPR020801 Polyketide synthase, acyl transferase domain AC028_RS04990 6470b4a62bf8e1b835dd77138d38c85a 434 Gene3D G3DSA:2.100.10.30 294 432 4.5E-26 T 05-07-2017 IPR001229 Jacalin-like lectin domain AC028_RS04990 6470b4a62bf8e1b835dd77138d38c85a 434 SUPERFAMILY SSF56219 32 286 4.46E-42 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS04990 6470b4a62bf8e1b835dd77138d38c85a 434 SMART SM00915 305 433 7.2E-12 T 05-07-2017 IPR001229 Jacalin-like lectin domain AC028_RS04990 6470b4a62bf8e1b835dd77138d38c85a 434 Pfam PF01419 Jacalin-like lectin domain 314 431 4.8E-9 T 05-07-2017 IPR001229 Jacalin-like lectin domain AC028_RS04990 6470b4a62bf8e1b835dd77138d38c85a 434 SUPERFAMILY SSF51101 295 431 1.57E-25 T 05-07-2017 IPR001229 Jacalin-like lectin domain AC028_RS07725 b52e4dce416e1b17e921155902da07e5 728 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 725 0.0 T 05-07-2017 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 AC028_RS07725 b52e4dce416e1b17e921155902da07e5 728 Gene3D G3DSA:3.40.50.300 5 110 1.1E-63 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07725 b52e4dce416e1b17e921155902da07e5 728 Gene3D G3DSA:3.40.50.300 192 286 1.1E-63 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07725 b52e4dce416e1b17e921155902da07e5 728 SUPERFAMILY SSF52540 6 647 8.35E-176 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07725 b52e4dce416e1b17e921155902da07e5 728 Gene3D G3DSA:3.40.50.300 287 388 2.7E-73 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07725 b52e4dce416e1b17e921155902da07e5 728 Gene3D G3DSA:3.40.50.300 557 647 2.7E-73 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07725 b52e4dce416e1b17e921155902da07e5 728 Gene3D G3DSA:1.10.486.10 389 546 5.4E-47 T 05-07-2017 AC028_RS07725 b52e4dce416e1b17e921155902da07e5 728 Pfam PF13361 UvrD-like helicase C-terminal domain 278 621 2.0E-73 T 05-07-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AC028_RS07725 b52e4dce416e1b17e921155902da07e5 728 Gene3D G3DSA:1.10.10.160 114 191 5.7E-22 T 05-07-2017 IPR013986 DExx box DNA helicase domain AC028_RS07725 b52e4dce416e1b17e921155902da07e5 728 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 272 5.7E-68 T 05-07-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AC028_RS06195 5ce1483177ddd2ff5ab037454cd02e35 295 Pfam PF12833 Helix-turn-helix domain 215 292 3.9E-20 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS06195 5ce1483177ddd2ff5ab037454cd02e35 295 Pfam PF02311 AraC-like ligand binding domain 33 166 3.7E-13 T 05-07-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AC028_RS06195 5ce1483177ddd2ff5ab037454cd02e35 295 SMART SM00342 209 292 9.2E-20 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS06195 5ce1483177ddd2ff5ab037454cd02e35 295 Gene3D G3DSA:1.10.10.60 190 245 9.4E-4 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS06195 5ce1483177ddd2ff5ab037454cd02e35 295 Gene3D G3DSA:2.60.120.10 41 100 8.2E-8 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS06195 5ce1483177ddd2ff5ab037454cd02e35 295 SUPERFAMILY SSF46689 247 292 1.57E-10 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS06195 5ce1483177ddd2ff5ab037454cd02e35 295 SUPERFAMILY SSF51182 42 109 2.4E-9 T 05-07-2017 IPR011051 RmlC-like cupin domain AC028_RS06195 5ce1483177ddd2ff5ab037454cd02e35 295 Gene3D G3DSA:1.10.10.60 248 292 1.8E-12 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS06195 5ce1483177ddd2ff5ab037454cd02e35 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 276 5.7E-5 T 05-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AC028_RS06195 5ce1483177ddd2ff5ab037454cd02e35 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 276 292 5.7E-5 T 05-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AC028_RS05880 a511046b03ba0a47476141cacc14cb32 119 Pfam PF00576 HIUase/Transthyretin family 13 118 4.0E-32 T 05-07-2017 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AC028_RS05880 a511046b03ba0a47476141cacc14cb32 119 PRINTS PR00189 Transthyretin signature 97 119 4.4E-9 T 05-07-2017 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AC028_RS05880 a511046b03ba0a47476141cacc14cb32 119 PRINTS PR00189 Transthyretin signature 12 32 4.4E-9 T 05-07-2017 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AC028_RS05880 a511046b03ba0a47476141cacc14cb32 119 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 11 119 1.1E-33 T 05-07-2017 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 AC028_RS05880 a511046b03ba0a47476141cacc14cb32 119 ProSitePatterns PS00769 Transthyretin signature 2. 102 114 - T 05-07-2017 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AC028_RS05880 a511046b03ba0a47476141cacc14cb32 119 SUPERFAMILY SSF49472 8 119 2.22E-38 T 05-07-2017 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AC028_RS05880 a511046b03ba0a47476141cacc14cb32 119 Gene3D G3DSA:2.60.40.180 12 119 5.5E-34 T 05-07-2017 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AC028_RS01635 17bcc063062ba37dcfc957d832c749e2 204 SMART SM00855 4 152 2.5E-11 T 05-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 AC028_RS01635 17bcc063062ba37dcfc957d832c749e2 204 SUPERFAMILY SSF53254 3 181 4.07E-43 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS01635 17bcc063062ba37dcfc957d832c749e2 204 Gene3D G3DSA:3.40.50.1240 1 182 4.9E-40 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS01635 17bcc063062ba37dcfc957d832c749e2 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 179 1.1E-40 T 05-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 AC028_RS11620 bbbb56170ce93b174fd18d97af35beac 155 SUPERFAMILY SSF47973 3 148 5.49E-57 T 05-07-2017 IPR023798 Ribosomal protein S7 domain AC028_RS11620 bbbb56170ce93b174fd18d97af35beac 155 Pfam PF00177 Ribosomal protein S7p/S5e 1 148 2.7E-64 T 05-07-2017 IPR023798 Ribosomal protein S7 domain AC028_RS11620 bbbb56170ce93b174fd18d97af35beac 155 Gene3D G3DSA:1.10.455.10 8 155 1.4E-63 T 05-07-2017 IPR023798 Ribosomal protein S7 domain AC028_RS11620 bbbb56170ce93b174fd18d97af35beac 155 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 155 35.363 T 05-07-2017 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AC028_RS11620 bbbb56170ce93b174fd18d97af35beac 155 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 05-07-2017 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11620 bbbb56170ce93b174fd18d97af35beac 155 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 3.6E-64 T 05-07-2017 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AC028_RS11620 bbbb56170ce93b174fd18d97af35beac 155 PIRSF PIRSF002122 2 155 2.4E-60 T 05-07-2017 IPR000235 Ribosomal protein S5/S7 GO:0006412 AC028_RS18750 58807b355cbfea064d2dfafade30ece6 785 SMART SM00843 718 783 1.7E-40 T 05-07-2017 IPR018541 FtsK gamma domain AC028_RS18750 58807b355cbfea064d2dfafade30ece6 785 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 31 204 1.0E-39 T 05-07-2017 IPR025199 DNA translocase FtsK, 4TM region AC028_RS18750 58807b355cbfea064d2dfafade30ece6 785 Pfam PF01580 FtsK/SpoIIIE family 394 607 3.6E-64 T 05-07-2017 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AC028_RS18750 58807b355cbfea064d2dfafade30ece6 785 SMART SM00382 429 628 0.0077 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS18750 58807b355cbfea064d2dfafade30ece6 785 SUPERFAMILY SSF46785 718 783 4.24E-22 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS18750 58807b355cbfea064d2dfafade30ece6 785 Gene3D G3DSA:3.40.50.300 368 674 2.0E-91 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18750 58807b355cbfea064d2dfafade30ece6 785 SUPERFAMILY SSF52540 366 679 5.8E-51 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18750 58807b355cbfea064d2dfafade30ece6 785 Pfam PF09397 Ftsk gamma domain 720 780 2.4E-27 T 05-07-2017 IPR018541 FtsK gamma domain AC028_RS20280 abace8010e05a518b69575a5ba7e7fa7 705 SUPERFAMILY SSF158472 218 267 9.29E-10 T 05-07-2017 AC028_RS20280 abace8010e05a518b69575a5ba7e7fa7 705 Pfam PF00563 EAL domain 459 692 3.2E-70 T 05-07-2017 IPR001633 EAL domain AC028_RS20280 abace8010e05a518b69575a5ba7e7fa7 705 SUPERFAMILY SSF55073 282 443 2.55E-44 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS20280 abace8010e05a518b69575a5ba7e7fa7 705 Gene3D G3DSA:3.20.20.450 455 703 1.8E-93 T 05-07-2017 IPR001633 EAL domain AC028_RS20280 abace8010e05a518b69575a5ba7e7fa7 705 Pfam PF17203 Single cache domain 3 54 172 1.1E-9 T 05-07-2017 IPR033463 Single cache domain 3 AC028_RS20280 abace8010e05a518b69575a5ba7e7fa7 705 Pfam PF00672 HAMP domain 198 267 9.6E-15 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS20280 abace8010e05a518b69575a5ba7e7fa7 705 SUPERFAMILY SSF141868 457 702 3.66E-86 T 05-07-2017 IPR001633 EAL domain AC028_RS20280 abace8010e05a518b69575a5ba7e7fa7 705 SMART SM00304 218 271 7.9E-13 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS20280 abace8010e05a518b69575a5ba7e7fa7 705 SMART SM00052 452 697 3.0E-109 T 05-07-2017 IPR001633 EAL domain AC028_RS20280 abace8010e05a518b69575a5ba7e7fa7 705 SUPERFAMILY SSF103190 77 173 2.31E-5 T 05-07-2017 IPR029151 Periplasmic sensor domain-like AC028_RS20280 abace8010e05a518b69575a5ba7e7fa7 705 SMART SM00267 266 442 1.8E-52 T 05-07-2017 IPR000160 GGDEF domain AC028_RS20280 abace8010e05a518b69575a5ba7e7fa7 705 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 274 438 6.2E-36 T 05-07-2017 IPR000160 GGDEF domain AC028_RS20280 abace8010e05a518b69575a5ba7e7fa7 705 Gene3D G3DSA:3.30.70.270 278 448 7.3E-51 T 05-07-2017 AC028_RS20280 abace8010e05a518b69575a5ba7e7fa7 705 Pfam PF00990 Diguanylate cyclase, GGDEF domain 277 437 1.9E-42 T 05-07-2017 IPR000160 GGDEF domain AC028_RS00060 08a9a2817a19dea402dc87274e99201f 144 Gene3D G3DSA:3.30.300.20 14 131 8.5E-32 T 05-07-2017 IPR015946 K homology domain-like, alpha/beta AC028_RS00060 08a9a2817a19dea402dc87274e99201f 144 SUPERFAMILY SSF82784 9 130 1.15E-30 T 05-07-2017 IPR003718 OsmC/Ohr family AC028_RS00060 08a9a2817a19dea402dc87274e99201f 144 Pfam PF02566 OsmC-like protein 36 128 1.7E-15 T 05-07-2017 IPR003718 OsmC/Ohr family AC028_RS04985 f47577a55b2abe7dfc5e536b2473ec62 433 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 33 134 4.1E-7 T 05-07-2017 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 AC028_RS04985 f47577a55b2abe7dfc5e536b2473ec62 433 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 285 374 1.6E-4 T 05-07-2017 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 AC028_RS04985 f47577a55b2abe7dfc5e536b2473ec62 433 Gene3D G3DSA:3.40.50.1240 140 277 2.3E-14 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS04985 f47577a55b2abe7dfc5e536b2473ec62 433 SUPERFAMILY SSF53254 32 426 7.06E-48 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS04985 f47577a55b2abe7dfc5e536b2473ec62 433 Gene3D G3DSA:3.40.50.1240 32 139 6.3E-64 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS04985 f47577a55b2abe7dfc5e536b2473ec62 433 Gene3D G3DSA:3.40.50.1240 281 428 6.3E-64 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS15275 ad61ea48b901333a77d7c877007d1abe 419 Pfam PF06738 Putative threonine/serine exporter 21 263 1.2E-53 T 05-07-2017 IPR010619 Putative threonine/serine exporter AC028_RS15275 ad61ea48b901333a77d7c877007d1abe 419 Pfam PF12821 Threonine/Serine exporter, ThrE 289 410 5.4E-13 T 05-07-2017 IPR024528 Threonine/Serine exporter, ThrE AC028_RS10290 4211406f441221811e2cab8a7f58dd0a 384 SUPERFAMILY SSF51556 61 355 1.63E-95 T 05-07-2017 IPR032466 Metal-dependent hydrolase AC028_RS10290 4211406f441221811e2cab8a7f58dd0a 384 Gene3D G3DSA:2.30.40.10 341 371 4.1E-5 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS10290 4211406f441221811e2cab8a7f58dd0a 384 Gene3D G3DSA:2.30.40.10 8 62 1.6E-11 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS10290 4211406f441221811e2cab8a7f58dd0a 384 Pfam PF01979 Amidohydrolase family 58 382 3.5E-27 T 05-07-2017 IPR006680 Amidohydrolase-related GO:0016787 AC028_RS10290 4211406f441221811e2cab8a7f58dd0a 384 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 7 381 6.7E-96 T 05-07-2017 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AC028_RS10290 4211406f441221811e2cab8a7f58dd0a 384 PIRSF PIRSF038994 5 384 1.1E-111 T 05-07-2017 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AC028_RS10290 4211406f441221811e2cab8a7f58dd0a 384 Gene3D G3DSA:3.20.20.140 63 340 1.5E-91 T 05-07-2017 AC028_RS10290 4211406f441221811e2cab8a7f58dd0a 384 SUPERFAMILY SSF51338 355 382 8.85E-13 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS10290 4211406f441221811e2cab8a7f58dd0a 384 SUPERFAMILY SSF51338 8 60 8.85E-13 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS01935 a17393b6c38c897f81f89f5d688f1565 295 Gene3D G3DSA:3.30.1490.20 103 174 7.8E-5 T 05-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AC028_RS01935 a17393b6c38c897f81f89f5d688f1565 295 SUPERFAMILY SSF56059 98 287 1.5E-42 T 05-07-2017 AC028_RS01935 a17393b6c38c897f81f89f5d688f1565 295 Gene3D G3DSA:3.30.470.20 175 277 6.2E-33 T 05-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AC028_RS01935 a17393b6c38c897f81f89f5d688f1565 295 Pfam PF08443 RimK-like ATP-grasp domain 98 283 4.9E-56 T 05-07-2017 IPR013651 ATP-grasp fold, RimK-type AC028_RS01935 a17393b6c38c897f81f89f5d688f1565 295 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 52.083 T 05-07-2017 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK AC028_RS01935 a17393b6c38c897f81f89f5d688f1565 295 Gene3D G3DSA:3.40.50.20 8 102 1.5E-18 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS01935 a17393b6c38c897f81f89f5d688f1565 295 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 283 3.7E-75 T 05-07-2017 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 AC028_RS12670 addc8168e9783bbb25ff0cee19f91a10 197 SMART SM00974 24 117 1.1E-9 T 05-07-2017 IPR018306 Bacteriophage T5, Orf172 DNA-binding AC028_RS09390 e531035269c6ec584df37f64431c82ce 409 Gene3D G3DSA:3.30.565.10 203 368 5.4E-34 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS09390 e531035269c6ec584df37f64431c82ce 409 SUPERFAMILY SSF55874 197 370 4.71E-35 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS09390 e531035269c6ec584df37f64431c82ce 409 Gene3D G3DSA:3.30.450.20 60 130 2.3E-6 T 05-07-2017 AC028_RS09390 e531035269c6ec584df37f64431c82ce 409 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 313 8.6E-17 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS09390 e531035269c6ec584df37f64431c82ce 409 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 327 8.6E-17 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS09390 e531035269c6ec584df37f64431c82ce 409 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 367 8.6E-17 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS09390 e531035269c6ec584df37f64431c82ce 409 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 348 8.6E-17 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS09390 e531035269c6ec584df37f64431c82ce 409 SMART SM00388 136 206 1.1E-4 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS09390 e531035269c6ec584df37f64431c82ce 409 SUPERFAMILY SSF47384 126 203 1.67E-8 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS09390 e531035269c6ec584df37f64431c82ce 409 Pfam PF00512 His Kinase A (phospho-acceptor) domain 137 204 1.9E-7 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS09390 e531035269c6ec584df37f64431c82ce 409 Gene3D G3DSA:1.10.287.130 131 202 9.6E-5 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS09390 e531035269c6ec584df37f64431c82ce 409 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 251 368 1.4E-16 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS09390 e531035269c6ec584df37f64431c82ce 409 SMART SM00387 247 370 8.9E-25 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS11215 f147ab9bc4e2a715bab66a4381ed670d 186 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 29 130 3.1E-12 T 05-07-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 AC028_RS11215 f147ab9bc4e2a715bab66a4381ed670d 186 Gene3D G3DSA:3.40.140.10 19 178 2.4E-32 T 05-07-2017 AC028_RS11215 f147ab9bc4e2a715bab66a4381ed670d 186 SUPERFAMILY SSF53927 5 180 9.03E-33 T 05-07-2017 IPR016193 Cytidine deaminase-like GO:0003824 AC028_RS17500 79cce66c18a4176a386a90202dc958f0 382 SUPERFAMILY SSF51604 95 359 5.76E-72 T 05-07-2017 IPR029065 Enolase C-terminal domain-like AC028_RS17500 79cce66c18a4176a386a90202dc958f0 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 7 107 1.4E-28 T 05-07-2017 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AC028_RS17500 79cce66c18a4176a386a90202dc958f0 382 SMART SM00922 125 230 1.4E-17 T 05-07-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AC028_RS17500 79cce66c18a4176a386a90202dc958f0 382 Gene3D G3DSA:3.20.20.120 113 349 4.9E-76 T 05-07-2017 IPR029065 Enolase C-terminal domain-like AC028_RS17500 79cce66c18a4176a386a90202dc958f0 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 05-07-2017 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AC028_RS17500 79cce66c18a4176a386a90202dc958f0 382 Hamap MF_01289 D-galactonate dehydratase [dgoD]. 1 382 70.41 T 05-07-2017 IPR023592 D-galactonate dehydratase GO:0008869|GO:0034194 KEGG: 00052+4.2.1.6 AC028_RS17500 79cce66c18a4176a386a90202dc958f0 382 Gene3D G3DSA:3.30.390.10 9 112 2.2E-47 T 05-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS17500 79cce66c18a4176a386a90202dc958f0 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 05-07-2017 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AC028_RS17500 79cce66c18a4176a386a90202dc958f0 382 Pfam PF13378 Enolase C-terminal domain-like 130 355 1.1E-54 T 05-07-2017 IPR029065 Enolase C-terminal domain-like AC028_RS17500 79cce66c18a4176a386a90202dc958f0 382 SUPERFAMILY SSF54826 1 112 1.2E-31 T 05-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS15540 a362910521737951e5bc071a32479f62 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 156 2.4E-17 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS15540 a362910521737951e5bc071a32479f62 712 Pfam PF00593 TonB dependent receptor 473 710 2.3E-26 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS15540 a362910521737951e5bc071a32479f62 712 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 695 712 - T 05-07-2017 IPR010917 TonB-dependent receptor, conserved site AC028_RS15540 a362910521737951e5bc071a32479f62 712 SUPERFAMILY SSF56935 27 712 3.85E-115 T 05-07-2017 AC028_RS15540 a362910521737951e5bc071a32479f62 712 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 712 2.2E-83 T 05-07-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AC028_RS15540 a362910521737951e5bc071a32479f62 712 Gene3D G3DSA:2.40.170.20 171 712 1.9E-110 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS15540 a362910521737951e5bc071a32479f62 712 Gene3D G3DSA:2.170.130.10 44 163 2.4E-32 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS03660 9f55ca5961b159f9687c9ffd0be0f4a1 319 Pfam PF07103 Protein of unknown function (DUF1365) 58 312 4.7E-74 T 05-07-2017 IPR010775 Protein of unknown function DUF1365 AC028_RS03910 d1e375939cf8df0493be87e4d0f9c069 344 SUPERFAMILY SSF51905 293 333 9.5E-32 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS03910 d1e375939cf8df0493be87e4d0f9c069 344 SUPERFAMILY SSF51905 17 210 9.5E-32 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS03910 d1e375939cf8df0493be87e4d0f9c069 344 Pfam PF13450 NAD(P)-binding Rossmann-like domain 20 82 2.4E-15 T 05-07-2017 AC028_RS03910 d1e375939cf8df0493be87e4d0f9c069 344 Gene3D G3DSA:3.90.660.10 59 123 7.8E-50 T 05-07-2017 AC028_RS03910 d1e375939cf8df0493be87e4d0f9c069 344 Gene3D G3DSA:3.90.660.10 201 291 7.8E-50 T 05-07-2017 AC028_RS03910 d1e375939cf8df0493be87e4d0f9c069 344 PRINTS PR00419 Adrenodoxin reductase family signature 40 53 8.4E-7 T 05-07-2017 AC028_RS03910 d1e375939cf8df0493be87e4d0f9c069 344 PRINTS PR00419 Adrenodoxin reductase family signature 17 39 8.4E-7 T 05-07-2017 AC028_RS03910 d1e375939cf8df0493be87e4d0f9c069 344 Gene3D G3DSA:3.50.50.60 124 200 4.0E-46 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS03910 d1e375939cf8df0493be87e4d0f9c069 344 Gene3D G3DSA:3.50.50.60 297 335 4.0E-46 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS03910 d1e375939cf8df0493be87e4d0f9c069 344 Gene3D G3DSA:3.50.50.60 16 54 4.0E-46 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS05260 bfc2f17b00cfbe49db013bcd5fabbefa 1235 SUPERFAMILY SSF52518 458 646 5.42E-12 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS05260 bfc2f17b00cfbe49db013bcd5fabbefa 1235 SUPERFAMILY SSF53323 744 958 3.14E-29 T 05-07-2017 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AC028_RS05260 bfc2f17b00cfbe49db013bcd5fabbefa 1235 Gene3D G3DSA:3.40.50.970 513 640 6.2E-8 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS05260 bfc2f17b00cfbe49db013bcd5fabbefa 1235 SUPERFAMILY SSF52922 285 413 7.33E-8 T 05-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AC028_RS05260 bfc2f17b00cfbe49db013bcd5fabbefa 1235 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 752 939 1.5E-21 T 05-07-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AC028_RS05260 bfc2f17b00cfbe49db013bcd5fabbefa 1235 Gene3D G3DSA:3.40.920.10 745 943 2.4E-19 T 05-07-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AC028_RS05260 bfc2f17b00cfbe49db013bcd5fabbefa 1235 SUPERFAMILY SSF52518 63 213 6.47E-12 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 SMART SM00387 625 735 6.2E-29 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 Gene3D G3DSA:3.30.565.10 584 735 3.7E-38 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 Pfam PF00072 Response regulator receiver domain 763 873 6.2E-17 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 SMART SM00388 516 581 2.5E-11 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 SMART SM00448 761 873 9.9E-17 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 Pfam PF12860 PAS fold 369 482 2.3E-40 T 05-07-2017 AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 Pfam PF00512 His Kinase A (phospho-acceptor) domain 517 581 5.2E-9 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 Gene3D G3DSA:3.40.50.2300 759 879 2.4E-21 T 05-07-2017 AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 SUPERFAMILY SSF103190 54 191 6.8E-14 T 05-07-2017 IPR029151 Periplasmic sensor domain-like AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 Gene3D G3DSA:3.30.450.20 98 182 1.0E-7 T 05-07-2017 AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 Gene3D G3DSA:1.10.287.130 509 577 2.0E-6 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 695 713 3.0E-12 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 719 732 3.0E-12 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 679 689 3.0E-12 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 661 675 3.0E-12 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 SUPERFAMILY SSF52172 759 877 1.12E-22 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 SUPERFAMILY SSF55785 355 466 1.11E-7 T 05-07-2017 IPR000014 PAS domain AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 SUPERFAMILY SSF55874 570 733 4.98E-38 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 Pfam PF02743 Cache domain 45 193 3.9E-13 T 05-07-2017 IPR033479 Double Cache domain 1 AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 626 733 2.1E-18 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 SUPERFAMILY SSF47384 502 582 1.59E-11 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS16090 98c97cc80792c00d27e02b297437fb49 881 Gene3D G3DSA:3.30.450.20 357 476 4.7E-13 T 05-07-2017 AC028_RS17980 f009609dbf8bd3d5efd3739806993932 158 SUPERFAMILY SSF46557 4 77 3.66E-29 T 05-07-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AC028_RS17980 f009609dbf8bd3d5efd3739806993932 158 SUPERFAMILY SSF54534 82 156 4.84E-22 T 05-07-2017 AC028_RS17980 f009609dbf8bd3d5efd3739806993932 158 PIRSF PIRSF006092 1 158 5.6E-51 T 05-07-2017 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AC028_RS17980 f009609dbf8bd3d5efd3739806993932 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 3.0E-32 T 05-07-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AC028_RS17980 f009609dbf8bd3d5efd3739806993932 158 Gene3D G3DSA:3.10.50.30 82 156 5.3E-29 T 05-07-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AC028_RS17980 f009609dbf8bd3d5efd3739806993932 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 4 154 2.8E-58 T 05-07-2017 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 AC028_RS17980 f009609dbf8bd3d5efd3739806993932 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 16 47 - T 05-07-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AC028_RS17980 f009609dbf8bd3d5efd3739806993932 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 156 3.4E-26 T 05-07-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AC028_RS17980 f009609dbf8bd3d5efd3739806993932 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 1 155 33.48 T 05-07-2017 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AC028_RS17980 f009609dbf8bd3d5efd3739806993932 158 Gene3D G3DSA:1.10.287.180 3 74 5.5E-35 T 05-07-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AC028_RS13410 91f1f1768c3e27d90f9364c16fcc945a 326 Pfam PF01609 Transposase DDE domain 135 310 1.2E-34 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS13410 91f1f1768c3e27d90f9364c16fcc945a 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS02140 91f1f1768c3e27d90f9364c16fcc945a 326 Pfam PF01609 Transposase DDE domain 135 310 1.2E-34 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS02140 91f1f1768c3e27d90f9364c16fcc945a 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS14880 91f1f1768c3e27d90f9364c16fcc945a 326 Pfam PF01609 Transposase DDE domain 135 310 1.2E-34 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS14880 91f1f1768c3e27d90f9364c16fcc945a 326 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS19755 df2c3f277ab4e7ab89b585ac5b3153a1 41 Pfam PF00444 Ribosomal protein L36 1 40 2.1E-17 T 05-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS19755 df2c3f277ab4e7ab89b585ac5b3153a1 41 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 17 40 0.006 T 05-07-2017 AC028_RS19755 df2c3f277ab4e7ab89b585ac5b3153a1 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 05-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS19755 df2c3f277ab4e7ab89b585ac5b3153a1 41 SUPERFAMILY SSF57840 1 40 8.24E-14 T 05-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS19755 df2c3f277ab4e7ab89b585ac5b3153a1 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 40 7.4E-9 T 05-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS19755 df2c3f277ab4e7ab89b585ac5b3153a1 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.227 T 05-07-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS04615 72d461e5918c099f328ac236b22aa91a 312 SUPERFAMILY SSF48179 184 307 1.8E-22 T 05-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AC028_RS04615 72d461e5918c099f328ac236b22aa91a 312 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 301 9.9E-59 T 05-07-2017 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 AC028_RS04615 72d461e5918c099f328ac236b22aa91a 312 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 155 2.4E-40 T 05-07-2017 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 AC028_RS04615 72d461e5918c099f328ac236b22aa91a 312 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 184 297 2.9E-16 T 05-07-2017 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 AC028_RS04615 72d461e5918c099f328ac236b22aa91a 312 Gene3D G3DSA:1.10.1040.10 184 305 2.0E-19 T 05-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AC028_RS04615 72d461e5918c099f328ac236b22aa91a 312 Gene3D G3DSA:3.40.50.720 1 181 9.4E-55 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS04615 72d461e5918c099f328ac236b22aa91a 312 SUPERFAMILY SSF51735 2 171 6.39E-12 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS03715 1b545a8a9c3903cb76dd72d318aac94d 200 Gene3D G3DSA:3.90.1140.10 27 199 5.7E-33 T 05-07-2017 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AC028_RS03715 1b545a8a9c3903cb76dd72d318aac94d 200 Pfam PF13563 2'-5' RNA ligase superfamily 53 175 9.4E-13 T 05-07-2017 AC028_RS03715 1b545a8a9c3903cb76dd72d318aac94d 200 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 26 199 15.291 T 05-07-2017 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AC028_RS03715 1b545a8a9c3903cb76dd72d318aac94d 200 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 27 199 7.5E-19 T 05-07-2017 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AC028_RS03715 1b545a8a9c3903cb76dd72d318aac94d 200 SUPERFAMILY SSF55144 27 199 9.77E-32 T 05-07-2017 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AC028_RS09955 72f53ea348a61821f7ef0e7dc6417c8b 676 Pfam PF13360 PQQ-like domain 142 256 3.2E-12 T 05-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat AC028_RS09955 72f53ea348a61821f7ef0e7dc6417c8b 676 SMART SM00564 216 253 22.0 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS09955 72f53ea348a61821f7ef0e7dc6417c8b 676 SMART SM00564 114 151 720.0 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS09955 72f53ea348a61821f7ef0e7dc6417c8b 676 SMART SM00564 170 202 1.1E-5 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS09955 72f53ea348a61821f7ef0e7dc6417c8b 676 SMART SM00564 540 572 6.6E-5 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS09955 72f53ea348a61821f7ef0e7dc6417c8b 676 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 57 600 1.8E-178 T 05-07-2017 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 AC028_RS09955 72f53ea348a61821f7ef0e7dc6417c8b 676 Pfam PF13570 PQQ-like domain 524 564 2.3E-7 T 05-07-2017 IPR025666 Pyrrolo-quinoline quinone-like domain AC028_RS09955 72f53ea348a61821f7ef0e7dc6417c8b 676 Gene3D G3DSA:2.140.10.10 47 605 3.8E-144 T 05-07-2017 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AC028_RS09955 72f53ea348a61821f7ef0e7dc6417c8b 676 SUPERFAMILY SSF50998 65 610 3.27E-142 T 05-07-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AC028_RS20220 896e63176b0a0622ad717a193d620ff4 381 Gene3D G3DSA:2.160.20.10 19 380 1.2E-58 T 05-07-2017 IPR012334 Pectin lyase fold AC028_RS20220 896e63176b0a0622ad717a193d620ff4 381 SUPERFAMILY SSF51126 27 380 2.22E-45 T 05-07-2017 IPR011050 Pectin lyase fold/virulence factor AC028_RS20220 896e63176b0a0622ad717a193d620ff4 381 Pfam PF00544 Pectate lyase 220 313 2.3E-8 T 05-07-2017 IPR002022 Pectate lyase/Amb allergen AC028_RS20220 896e63176b0a0622ad717a193d620ff4 381 SMART SM00656 37 319 5.7E-7 T 05-07-2017 IPR002022 Pectate lyase/Amb allergen AC028_RS05630 44360dc459ae744fd4a7822ca09b0be6 346 PIRSF PIRSF038896 3 326 1.6E-87 T 05-07-2017 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 AC028_RS05630 44360dc459ae744fd4a7822ca09b0be6 346 SUPERFAMILY SSF56281 75 150 3.52E-33 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS05630 44360dc459ae744fd4a7822ca09b0be6 346 SUPERFAMILY SSF56281 177 324 3.52E-33 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS05630 44360dc459ae744fd4a7822ca09b0be6 346 Pfam PF12706 Beta-lactamase superfamily domain 93 285 4.3E-43 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS05630 44360dc459ae744fd4a7822ca09b0be6 346 Gene3D G3DSA:3.60.15.10 34 336 1.2E-97 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS04645 c24094aa5a0d3b7f82eee6596d346c4c 347 Pfam PF00268 Ribonucleotide reductase, small chain 32 305 7.2E-66 T 05-07-2017 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AC028_RS04645 c24094aa5a0d3b7f82eee6596d346c4c 347 PIRSF PIRSF000355 3 347 2.0E-112 T 05-07-2017 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AC028_RS04645 c24094aa5a0d3b7f82eee6596d346c4c 347 Gene3D G3DSA:1.10.620.20 14 316 6.4E-80 T 05-07-2017 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: R-HSA-499943 AC028_RS04645 c24094aa5a0d3b7f82eee6596d346c4c 347 SUPERFAMILY SSF47240 23 347 3.55E-85 T 05-07-2017 IPR009078 Ferritin-like superfamily AC028_RS01580 234c0c4513eeb4e727aac02231aa91dd 713 Gene3D G3DSA:2.40.170.20 178 713 1.0E-95 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01580 234c0c4513eeb4e727aac02231aa91dd 713 SUPERFAMILY SSF56935 46 713 6.8E-108 T 05-07-2017 AC028_RS01580 234c0c4513eeb4e727aac02231aa91dd 713 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 68 713 8.9E-81 T 05-07-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AC028_RS01580 234c0c4513eeb4e727aac02231aa91dd 713 Pfam PF00593 TonB dependent receptor 471 712 1.5E-27 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01580 234c0c4513eeb4e727aac02231aa91dd 713 Gene3D G3DSA:2.170.130.10 66 177 1.3E-29 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS01580 234c0c4513eeb4e727aac02231aa91dd 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 176 1.4E-22 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS06585 578fcd1a6268a4b779c4743d1ddda775 128 Gene3D G3DSA:3.10.450.50 8 127 2.9E-39 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS06585 578fcd1a6268a4b779c4743d1ddda775 128 SUPERFAMILY SSF54427 28 127 9.8E-29 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS06585 578fcd1a6268a4b779c4743d1ddda775 128 Pfam PF02810 SEC-C motif 7 23 7.4E-5 T 05-07-2017 IPR004027 SEC-C motif AC028_RS06585 578fcd1a6268a4b779c4743d1ddda775 128 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 5 128 29.868 T 05-07-2017 IPR023006 Uncharacterised protein family UPF0225 AC028_RS19095 9d6bdf02f47da252eb15299ea4b2e5d7 335 TIGRFAM TIGR00749 glk: glucokinase 9 320 2.0E-80 T 05-07-2017 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AC028_RS19095 9d6bdf02f47da252eb15299ea4b2e5d7 335 SUPERFAMILY SSF53067 8 326 6.39E-60 T 05-07-2017 AC028_RS19095 9d6bdf02f47da252eb15299ea4b2e5d7 335 Pfam PF02685 Glucokinase 9 324 1.4E-111 T 05-07-2017 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AC028_RS19095 9d6bdf02f47da252eb15299ea4b2e5d7 335 Gene3D G3DSA:3.30.420.40 5 108 7.0E-37 T 05-07-2017 AC028_RS19095 9d6bdf02f47da252eb15299ea4b2e5d7 335 Hamap MF_00524 Glucokinase [glk]. 5 326 37.74 T 05-07-2017 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AC028_RS19095 9d6bdf02f47da252eb15299ea4b2e5d7 335 Gene3D G3DSA:3.40.367.20 109 305 3.6E-66 T 05-07-2017 AC028_RS10860 7616374c45f1956771f57a29684db6a8 316 Gene3D G3DSA:3.40.1190.20 2 312 6.3E-66 T 05-07-2017 IPR029056 Ribokinase-like AC028_RS10860 7616374c45f1956771f57a29684db6a8 316 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 261 274 - T 05-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AC028_RS10860 7616374c45f1956771f57a29684db6a8 316 SUPERFAMILY SSF53613 1 312 1.45E-57 T 05-07-2017 IPR029056 Ribokinase-like AC028_RS10860 7616374c45f1956771f57a29684db6a8 316 Hamap MF_01987 Ribokinase [rbsK]. 2 315 21.226 T 05-07-2017 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 AC028_RS10860 7616374c45f1956771f57a29684db6a8 316 Pfam PF00294 pfkB family carbohydrate kinase 1 310 1.3E-44 T 05-07-2017 IPR011611 Carbohydrate kinase PfkB AC028_RS10860 7616374c45f1956771f57a29684db6a8 316 PRINTS PR00990 Ribokinase signature 102 115 8.4E-19 T 05-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AC028_RS10860 7616374c45f1956771f57a29684db6a8 316 PRINTS PR00990 Ribokinase signature 171 186 8.4E-19 T 05-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AC028_RS10860 7616374c45f1956771f57a29684db6a8 316 PRINTS PR00990 Ribokinase signature 224 235 8.4E-19 T 05-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AC028_RS10860 7616374c45f1956771f57a29684db6a8 316 PRINTS PR00990 Ribokinase signature 6 27 8.4E-19 T 05-07-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 AC028_RS19410 e599288929e96c2759e795c6512b107d 95 SUPERFAMILY SSF54909 5 80 2.52E-21 T 05-07-2017 IPR011008 Dimeric alpha-beta barrel AC028_RS19410 e599288929e96c2759e795c6512b107d 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 6 75 3.0E-16 T 05-07-2017 IPR007138 Antibiotic biosynthesis monooxygenase domain AC028_RS19410 e599288929e96c2759e795c6512b107d 95 Gene3D G3DSA:3.30.70.900 5 78 4.5E-24 T 05-07-2017 AC028_RS07520 99608528f9c822408e72f0cee37e76b7 256 Gene3D G3DSA:3.40.50.720 12 255 5.7E-78 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS07520 99608528f9c822408e72f0cee37e76b7 256 SUPERFAMILY SSF51735 14 255 9.39E-74 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS07520 99608528f9c822408e72f0cee37e76b7 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 6.1E-9 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07520 99608528f9c822408e72f0cee37e76b7 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 6.1E-9 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07520 99608528f9c822408e72f0cee37e76b7 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 6.1E-9 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07520 99608528f9c822408e72f0cee37e76b7 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 255 4.6E-62 T 05-07-2017 AC028_RS07520 99608528f9c822408e72f0cee37e76b7 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 05-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AC028_RS07520 99608528f9c822408e72f0cee37e76b7 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 4.8E-38 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07520 99608528f9c822408e72f0cee37e76b7 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.8E-38 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07520 99608528f9c822408e72f0cee37e76b7 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 4.8E-38 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07520 99608528f9c822408e72f0cee37e76b7 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 4.8E-38 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07520 99608528f9c822408e72f0cee37e76b7 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 4.8E-38 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07520 99608528f9c822408e72f0cee37e76b7 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 4.8E-38 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS00155 2ab975e26e1ba7a42fce5af8fba5a96c 494 Pfam PF02743 Cache domain 44 227 1.2E-18 T 05-07-2017 IPR033479 Double Cache domain 1 AC028_RS00155 2ab975e26e1ba7a42fce5af8fba5a96c 494 Gene3D G3DSA:3.30.70.270 332 492 1.9E-50 T 05-07-2017 AC028_RS00155 2ab975e26e1ba7a42fce5af8fba5a96c 494 Gene3D G3DSA:3.30.450.20 90 172 1.4E-12 T 05-07-2017 AC028_RS00155 2ab975e26e1ba7a42fce5af8fba5a96c 494 SUPERFAMILY SSF55073 334 492 6.75E-46 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS00155 2ab975e26e1ba7a42fce5af8fba5a96c 494 SMART SM00267 318 494 1.3E-58 T 05-07-2017 IPR000160 GGDEF domain AC028_RS00155 2ab975e26e1ba7a42fce5af8fba5a96c 494 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 326 492 3.4E-47 T 05-07-2017 IPR000160 GGDEF domain AC028_RS00155 2ab975e26e1ba7a42fce5af8fba5a96c 494 Gene3D G3DSA:3.30.450.20 173 287 3.4E-9 T 05-07-2017 AC028_RS00155 2ab975e26e1ba7a42fce5af8fba5a96c 494 Pfam PF00990 Diguanylate cyclase, GGDEF domain 329 491 3.1E-47 T 05-07-2017 IPR000160 GGDEF domain AC028_RS14710 8f6f69da6cce71533a2427ede9f40f02 303 Pfam PF00892 EamA-like transporter family 15 146 8.2E-16 T 05-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AC028_RS14710 8f6f69da6cce71533a2427ede9f40f02 303 Pfam PF00892 EamA-like transporter family 159 285 9.3E-9 T 05-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AC028_RS14710 8f6f69da6cce71533a2427ede9f40f02 303 SUPERFAMILY SSF103481 190 290 8.5E-10 T 05-07-2017 AC028_RS14710 8f6f69da6cce71533a2427ede9f40f02 303 SUPERFAMILY SSF103481 53 149 2.35E-15 T 05-07-2017 AC028_RS03325 c0f99aa57731600286562819586d2308 944 TIGRFAM TIGR00422 valS: valine--tRNA ligase 6 927 0.0 T 05-07-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AC028_RS03325 c0f99aa57731600286562819586d2308 944 SUPERFAMILY SSF50677 194 363 2.88E-55 T 05-07-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AC028_RS03325 c0f99aa57731600286562819586d2308 944 SUPERFAMILY SSF46589 880 944 7.32E-16 T 05-07-2017 IPR010978 tRNA-binding arm GO:0000166 AC028_RS03325 c0f99aa57731600286562819586d2308 944 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 17 627 4.1E-195 T 05-07-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS03325 c0f99aa57731600286562819586d2308 944 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 880 943 4.5E-18 T 05-07-2017 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AC028_RS03325 c0f99aa57731600286562819586d2308 944 PRINTS PR00986 Valyl-tRNA synthetase signature 367 380 4.5E-32 T 05-07-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AC028_RS03325 c0f99aa57731600286562819586d2308 944 PRINTS PR00986 Valyl-tRNA synthetase signature 502 520 4.5E-32 T 05-07-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AC028_RS03325 c0f99aa57731600286562819586d2308 944 PRINTS PR00986 Valyl-tRNA synthetase signature 251 268 4.5E-32 T 05-07-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AC028_RS03325 c0f99aa57731600286562819586d2308 944 PRINTS PR00986 Valyl-tRNA synthetase signature 467 488 4.5E-32 T 05-07-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AC028_RS03325 c0f99aa57731600286562819586d2308 944 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 4.5E-32 T 05-07-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AC028_RS03325 c0f99aa57731600286562819586d2308 944 Gene3D G3DSA:1.10.730.10 628 811 2.2E-56 T 05-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS03325 c0f99aa57731600286562819586d2308 944 Gene3D G3DSA:3.40.50.620 7 195 1.1E-134 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS03325 c0f99aa57731600286562819586d2308 944 Gene3D G3DSA:3.40.50.620 605 626 1.1E-134 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS03325 c0f99aa57731600286562819586d2308 944 Gene3D G3DSA:3.40.50.620 362 567 1.1E-134 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS03325 c0f99aa57731600286562819586d2308 944 Gene3D G3DSA:3.90.740.10 198 358 9.1E-45 T 05-07-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AC028_RS03325 c0f99aa57731600286562819586d2308 944 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 05-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS03325 c0f99aa57731600286562819586d2308 944 SUPERFAMILY SSF52374 362 567 7.3E-130 T 05-07-2017 AC028_RS03325 c0f99aa57731600286562819586d2308 944 SUPERFAMILY SSF52374 2 194 7.3E-130 T 05-07-2017 AC028_RS03325 c0f99aa57731600286562819586d2308 944 SUPERFAMILY SSF52374 605 637 7.3E-130 T 05-07-2017 AC028_RS03325 c0f99aa57731600286562819586d2308 944 Hamap MF_02004 Valine--tRNA ligase [valS]. 4 944 15.522 T 05-07-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AC028_RS03325 c0f99aa57731600286562819586d2308 944 SUPERFAMILY SSF47323 638 894 1.16E-61 T 05-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS03325 c0f99aa57731600286562819586d2308 944 Pfam PF08264 Anticodon-binding domain of tRNA 668 820 2.1E-41 T 05-07-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AC028_RS03325 c0f99aa57731600286562819586d2308 944 Gene3D G3DSA:1.10.287.380 873 944 1.5E-11 T 05-07-2017 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AC028_RS01170 09e7a472f2b0633da72a36ef1e5e9167 678 Gene3D G3DSA:1.10.287.950 428 646 2.0E-52 T 05-07-2017 AC028_RS01170 09e7a472f2b0633da72a36ef1e5e9167 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 479 674 1.8E-48 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS01170 09e7a472f2b0633da72a36ef1e5e9167 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 435 464 6.3E-19 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS01170 09e7a472f2b0633da72a36ef1e5e9167 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 541 570 6.3E-19 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS01170 09e7a472f2b0633da72a36ef1e5e9167 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 512 539 6.3E-19 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS01170 09e7a472f2b0633da72a36ef1e5e9167 678 SMART SM00283 414 675 4.5E-86 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS01170 09e7a472f2b0633da72a36ef1e5e9167 678 SUPERFAMILY SSF58104 376 676 8.72E-69 T 05-07-2017 AC028_RS11155 86b0a31749f7072edaba29d308c14a1f 119 Gene3D G3DSA:1.10.700.10 1 116 1.8E-47 T 05-07-2017 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit AC028_RS11155 86b0a31749f7072edaba29d308c14a1f 119 SUPERFAMILY SSF48076 1 117 1.44E-47 T 05-07-2017 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit AC028_RS11155 86b0a31749f7072edaba29d308c14a1f 119 Pfam PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit 28 114 2.1E-32 T 05-07-2017 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit AC028_RS16025 f3017770d42ee56a11bc5bd315e179ae 397 SUPERFAMILY SSF56935 320 390 4.58E-11 T 05-07-2017 AC028_RS16025 f3017770d42ee56a11bc5bd315e179ae 397 SUPERFAMILY SSF56935 32 281 4.58E-11 T 05-07-2017 AC028_RS16025 f3017770d42ee56a11bc5bd315e179ae 397 Pfam PF07396 Phosphate-selective porin O and P 36 397 1.3E-91 T 05-07-2017 IPR010870 Phosphate-selective porin O/P AC028_RS16025 f3017770d42ee56a11bc5bd315e179ae 397 Gene3D G3DSA:2.40.160.10 22 397 1.6E-90 T 05-07-2017 IPR023614 Porin domain AC028_RS16105 875af5e057d2cd502c5fad19177e0c9b 769 PIRSF PIRSF036684 1 756 0.0 T 05-07-2017 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 AC028_RS16105 875af5e057d2cd502c5fad19177e0c9b 769 SUPERFAMILY SSF51735 164 451 5.26E-84 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS16105 875af5e057d2cd502c5fad19177e0c9b 769 Pfam PF01515 Phosphate acetyl/butaryl transferase 428 748 7.5E-91 T 05-07-2017 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AC028_RS16105 875af5e057d2cd502c5fad19177e0c9b 769 SUPERFAMILY SSF53659 428 751 5.76E-86 T 05-07-2017 AC028_RS16105 875af5e057d2cd502c5fad19177e0c9b 769 Gene3D G3DSA:3.40.50.10750 566 724 1.8E-49 T 05-07-2017 AC028_RS16105 875af5e057d2cd502c5fad19177e0c9b 769 Pfam PF00390 Malic enzyme, N-terminal domain 20 152 7.7E-26 T 05-07-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AC028_RS16105 875af5e057d2cd502c5fad19177e0c9b 769 SMART SM00919 164 399 6.9E-129 T 05-07-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AC028_RS16105 875af5e057d2cd502c5fad19177e0c9b 769 Pfam PF03949 Malic enzyme, NAD binding domain 166 360 1.7E-20 T 05-07-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AC028_RS16105 875af5e057d2cd502c5fad19177e0c9b 769 Gene3D G3DSA:3.40.50.10380 9 161 4.2E-50 T 05-07-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AC028_RS16105 875af5e057d2cd502c5fad19177e0c9b 769 SMART SM01274 19 152 1.5E-74 T 05-07-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AC028_RS16105 875af5e057d2cd502c5fad19177e0c9b 769 SUPERFAMILY SSF53223 11 162 1.22E-50 T 05-07-2017 AC028_RS16105 875af5e057d2cd502c5fad19177e0c9b 769 Gene3D G3DSA:3.40.50.720 162 447 3.2E-86 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS06920 b70a30032c632828a76c2e2003e31c89 415 Pfam PF08448 PAS fold 326 401 4.1E-7 T 05-07-2017 IPR013656 PAS fold-4 AC028_RS06920 b70a30032c632828a76c2e2003e31c89 415 Pfam PF01590 GAF domain 56 160 2.5E-6 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS06920 b70a30032c632828a76c2e2003e31c89 415 SUPERFAMILY SSF55781 33 172 4.17E-21 T 05-07-2017 IPR029016 GAF domain-like AC028_RS06920 b70a30032c632828a76c2e2003e31c89 415 SMART SM00065 30 173 2.6E-6 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS06920 b70a30032c632828a76c2e2003e31c89 415 SMART SM00091 313 379 6.4E-9 T 05-07-2017 IPR000014 PAS domain AC028_RS06920 b70a30032c632828a76c2e2003e31c89 415 Gene3D G3DSA:3.30.450.20 299 403 2.6E-19 T 05-07-2017 AC028_RS06920 b70a30032c632828a76c2e2003e31c89 415 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 310 402 3.1E-11 T 05-07-2017 IPR000014 PAS domain AC028_RS06920 b70a30032c632828a76c2e2003e31c89 415 SUPERFAMILY SSF55785 298 403 1.19E-18 T 05-07-2017 IPR000014 PAS domain AC028_RS06920 b70a30032c632828a76c2e2003e31c89 415 Gene3D G3DSA:3.30.450.20 184 298 1.8E-14 T 05-07-2017 AC028_RS06920 b70a30032c632828a76c2e2003e31c89 415 SUPERFAMILY SSF55785 178 299 1.01E-13 T 05-07-2017 IPR000014 PAS domain AC028_RS06920 b70a30032c632828a76c2e2003e31c89 415 Gene3D G3DSA:3.30.450.40 30 183 6.3E-10 T 05-07-2017 IPR029016 GAF domain-like AC028_RS01350 ac3d4e33e8a9fdffd67060f476261ff2 722 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 623 652 8.6E-29 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS01350 ac3d4e33e8a9fdffd67060f476261ff2 722 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 575 604 8.6E-29 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS01350 ac3d4e33e8a9fdffd67060f476261ff2 722 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 462 491 8.6E-29 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS01350 ac3d4e33e8a9fdffd67060f476261ff2 722 SUPERFAMILY SSF58104 415 698 5.49E-72 T 05-07-2017 AC028_RS01350 ac3d4e33e8a9fdffd67060f476261ff2 722 Pfam PF00672 HAMP domain 197 262 9.0E-15 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS01350 ac3d4e33e8a9fdffd67060f476261ff2 722 Gene3D G3DSA:1.10.287.950 463 667 3.6E-63 T 05-07-2017 AC028_RS01350 ac3d4e33e8a9fdffd67060f476261ff2 722 SMART SM00283 448 695 6.4E-92 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS01350 ac3d4e33e8a9fdffd67060f476261ff2 722 Pfam PF12729 Four helix bundle sensory module for signal transduction 8 185 5.2E-13 T 05-07-2017 IPR024478 4HB MCP domain AC028_RS01350 ac3d4e33e8a9fdffd67060f476261ff2 722 SMART SM00304 214 266 5.2E-9 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS01350 ac3d4e33e8a9fdffd67060f476261ff2 722 SMART SM00304 395 447 11.0 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS01350 ac3d4e33e8a9fdffd67060f476261ff2 722 SUPERFAMILY SSF158472 214 265 1.83E-9 T 05-07-2017 AC028_RS01350 ac3d4e33e8a9fdffd67060f476261ff2 722 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 500 694 1.3E-61 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS04005 2acaedbb2ed7df03971b1fea953d0ffd 285 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 83 96 - T 05-07-2017 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AC028_RS04005 2acaedbb2ed7df03971b1fea953d0ffd 285 Pfam PF01564 Spermine/spermidine synthase 15 243 5.4E-66 T 05-07-2017 AC028_RS04005 2acaedbb2ed7df03971b1fea953d0ffd 285 Gene3D G3DSA:2.30.140.10 5 58 7.0E-17 T 05-07-2017 AC028_RS04005 2acaedbb2ed7df03971b1fea953d0ffd 285 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 36.643 T 05-07-2017 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AC028_RS04005 2acaedbb2ed7df03971b1fea953d0ffd 285 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 5.9E-81 T 05-07-2017 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AC028_RS04005 2acaedbb2ed7df03971b1fea953d0ffd 285 SUPERFAMILY SSF53335 7 284 1.09E-75 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS04005 2acaedbb2ed7df03971b1fea953d0ffd 285 Gene3D G3DSA:3.40.50.150 61 283 1.6E-70 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS20050 8a70b8ffbc6034e4d58fd023cc35b306 368 Gene3D G3DSA:2.70.70.10 25 134 1.1E-22 T 05-07-2017 AC028_RS20050 8a70b8ffbc6034e4d58fd023cc35b306 368 Pfam PF01551 Peptidase family M23 40 134 3.0E-18 T 05-07-2017 IPR016047 Peptidase M23 AC028_RS20050 8a70b8ffbc6034e4d58fd023cc35b306 368 SUPERFAMILY SSF51261 25 121 7.85E-24 T 05-07-2017 IPR011055 Duplicated hybrid motif AC028_RS18915 9d50e948a1cc10d84755c9a57fd53b64 477 PIRSF PIRSF000332 14 444 2.9E-58 T 05-07-2017 IPR012143 Dimethylaniline monooxygenase, N-oxide-forming GO:0004499|GO:0050660|GO:0050661|GO:0055114 KEGG: 00982+1.14.13.8 AC028_RS18915 9d50e948a1cc10d84755c9a57fd53b64 477 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 307 334 9.4E-23 T 05-07-2017 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AC028_RS18915 9d50e948a1cc10d84755c9a57fd53b64 477 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 142 158 9.4E-23 T 05-07-2017 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AC028_RS18915 9d50e948a1cc10d84755c9a57fd53b64 477 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 113 125 9.4E-23 T 05-07-2017 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AC028_RS18915 9d50e948a1cc10d84755c9a57fd53b64 477 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 16 32 9.4E-23 T 05-07-2017 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AC028_RS18915 9d50e948a1cc10d84755c9a57fd53b64 477 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 64 82 9.4E-23 T 05-07-2017 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AC028_RS18915 9d50e948a1cc10d84755c9a57fd53b64 477 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 196 211 9.4E-23 T 05-07-2017 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AC028_RS18915 9d50e948a1cc10d84755c9a57fd53b64 477 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 88 103 9.4E-23 T 05-07-2017 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 AC028_RS18915 9d50e948a1cc10d84755c9a57fd53b64 477 Pfam PF00743 Flavin-binding monooxygenase-like 17 389 4.7E-53 T 05-07-2017 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 AC028_RS18915 9d50e948a1cc10d84755c9a57fd53b64 477 SUPERFAMILY SSF51905 18 214 6.31E-46 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS18915 9d50e948a1cc10d84755c9a57fd53b64 477 SUPERFAMILY SSF51905 274 382 1.04E-6 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS18915 9d50e948a1cc10d84755c9a57fd53b64 477 SUPERFAMILY SSF51905 183 214 1.04E-6 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS18915 9d50e948a1cc10d84755c9a57fd53b64 477 Gene3D G3DSA:3.50.50.60 157 221 7.1E-26 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS18915 9d50e948a1cc10d84755c9a57fd53b64 477 Gene3D G3DSA:3.50.50.60 288 320 7.1E-26 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS18915 9d50e948a1cc10d84755c9a57fd53b64 477 Gene3D G3DSA:3.50.50.60 17 156 1.5E-46 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS18915 9d50e948a1cc10d84755c9a57fd53b64 477 Gene3D G3DSA:3.50.50.60 321 442 1.5E-46 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 22 40 1.6E-86 T 05-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 109 125 1.6E-86 T 05-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 331 349 1.6E-86 T 05-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 291 310 1.6E-86 T 05-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 127 144 1.6E-86 T 05-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 40 54 1.6E-86 T 05-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 85 104 1.6E-86 T 05-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 156 176 1.6E-86 T 05-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 PRINTS PR00681 Ribosomal protein S1 signature 213 234 1.6E-86 T 05-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 SUPERFAMILY SSF50249 1 113 2.09E-21 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 Gene3D G3DSA:2.40.50.140 193 279 7.5E-31 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 Gene3D G3DSA:2.40.50.140 281 363 3.1E-31 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 Gene3D G3DSA:2.40.50.140 22 102 1.8E-10 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 SUPERFAMILY SSF50249 191 277 4.62E-27 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 SUPERFAMILY SSF50249 431 537 3.88E-20 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 SMART SM00316 363 435 1.1E-20 T 05-07-2017 IPR022967 RNA-binding domain, S1 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 SMART SM00316 104 172 7.1E-9 T 05-07-2017 IPR022967 RNA-binding domain, S1 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 SMART SM00316 191 261 1.3E-28 T 05-07-2017 IPR022967 RNA-binding domain, S1 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 SMART SM00316 276 348 1.2E-27 T 05-07-2017 IPR022967 RNA-binding domain, S1 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 SMART SM00316 20 88 5.7E-6 T 05-07-2017 IPR022967 RNA-binding domain, S1 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 SMART SM00316 450 521 5.4E-16 T 05-07-2017 IPR022967 RNA-binding domain, S1 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 PIRSF PIRSF002111 1 535 1.5E-213 T 05-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 SUPERFAMILY SSF50249 256 364 1.19E-28 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 Gene3D G3DSA:2.40.50.140 449 531 4.2E-19 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 Gene3D G3DSA:2.40.50.140 364 445 9.4E-26 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 SUPERFAMILY SSF50249 345 441 6.04E-22 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 Gene3D G3DSA:2.40.50.140 103 173 5.5E-15 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 SUPERFAMILY SSF50249 104 186 2.24E-14 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 Pfam PF00575 S1 RNA binding domain 18 87 1.2E-4 T 05-07-2017 IPR003029 S1 domain GO:0003676 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 Pfam PF00575 S1 RNA binding domain 362 435 1.0E-19 T 05-07-2017 IPR003029 S1 domain GO:0003676 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 Pfam PF00575 S1 RNA binding domain 451 521 5.5E-13 T 05-07-2017 IPR003029 S1 domain GO:0003676 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 Pfam PF00575 S1 RNA binding domain 104 172 1.8E-10 T 05-07-2017 IPR003029 S1 domain GO:0003676 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 Pfam PF00575 S1 RNA binding domain 277 348 1.3E-22 T 05-07-2017 IPR003029 S1 domain GO:0003676 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 Pfam PF00575 S1 RNA binding domain 189 261 1.5E-22 T 05-07-2017 IPR003029 S1 domain GO:0003676 AC028_RS19745 445f1b0a2ca5d64761d6291022b17598 561 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 521 1.9E-209 T 05-07-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AC028_RS18925 e1ad0f2dc5d120a4009a9d38bde40ec5 444 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 29 442 39.553 T 05-07-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AC028_RS18925 e1ad0f2dc5d120a4009a9d38bde40ec5 444 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 38 410 3.5E-120 T 05-07-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AC028_RS18925 e1ad0f2dc5d120a4009a9d38bde40ec5 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 117 143 5.3E-61 T 05-07-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AC028_RS18925 e1ad0f2dc5d120a4009a9d38bde40ec5 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 326 345 5.3E-61 T 05-07-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AC028_RS18925 e1ad0f2dc5d120a4009a9d38bde40ec5 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 354 371 5.3E-61 T 05-07-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AC028_RS18925 e1ad0f2dc5d120a4009a9d38bde40ec5 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 170 191 5.3E-61 T 05-07-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AC028_RS18925 e1ad0f2dc5d120a4009a9d38bde40ec5 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 145 164 5.3E-61 T 05-07-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AC028_RS18925 e1ad0f2dc5d120a4009a9d38bde40ec5 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 386 405 5.3E-61 T 05-07-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AC028_RS18925 e1ad0f2dc5d120a4009a9d38bde40ec5 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 222 245 5.3E-61 T 05-07-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AC028_RS18925 e1ad0f2dc5d120a4009a9d38bde40ec5 444 Pfam PF01566 Natural resistance-associated macrophage protein 58 414 4.9E-130 T 05-07-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AC028_RS06455 95b9de494cfac355b51c10817199d95e 1012 SUPERFAMILY SSF49452 31 99 4.71E-7 T 05-07-2017 IPR013784 Carbohydrate-binding-like fold GO:0030246 AC028_RS06455 95b9de494cfac355b51c10817199d95e 1012 Gene3D G3DSA:2.40.170.20 718 1009 3.9E-44 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS06455 95b9de494cfac355b51c10817199d95e 1012 Gene3D G3DSA:2.40.170.20 633 673 3.9E-44 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS06455 95b9de494cfac355b51c10817199d95e 1012 Gene3D G3DSA:2.40.170.20 251 580 3.9E-44 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS06455 95b9de494cfac355b51c10817199d95e 1012 Gene3D G3DSA:2.170.130.10 116 208 4.6E-6 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS06455 95b9de494cfac355b51c10817199d95e 1012 SUPERFAMILY SSF56935 120 329 1.13E-57 T 05-07-2017 AC028_RS06455 95b9de494cfac355b51c10817199d95e 1012 SUPERFAMILY SSF56935 933 1009 1.13E-57 T 05-07-2017 AC028_RS06455 95b9de494cfac355b51c10817199d95e 1012 SUPERFAMILY SSF56935 731 905 1.13E-57 T 05-07-2017 AC028_RS06455 95b9de494cfac355b51c10817199d95e 1012 SUPERFAMILY SSF56935 630 671 1.13E-57 T 05-07-2017 AC028_RS06455 95b9de494cfac355b51c10817199d95e 1012 SUPERFAMILY SSF56935 356 590 1.13E-57 T 05-07-2017 AC028_RS06455 95b9de494cfac355b51c10817199d95e 1012 Gene3D G3DSA:2.60.40.10 48 101 2.6E-5 T 05-07-2017 IPR013783 Immunoglobulin-like fold AC028_RS06455 95b9de494cfac355b51c10817199d95e 1012 Pfam PF13620 Carboxypeptidase regulatory-like domain 47 103 4.1E-7 T 05-07-2017 AC028_RS13865 270f8eb88c02575e15898da41612b4ed 570 Pfam PF00271 Helicase conserved C-terminal domain 245 352 8.7E-28 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS13865 270f8eb88c02575e15898da41612b4ed 570 SUPERFAMILY SSF52540 84 363 6.97E-73 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS13865 270f8eb88c02575e15898da41612b4ed 570 Pfam PF12300 Protein of unknown function (DUF3628) 377 548 9.3E-67 T 05-07-2017 IPR022077 ATP-dependent RNA helicase RhlB GO:0016817 AC028_RS13865 270f8eb88c02575e15898da41612b4ed 570 SMART SM00490 271 352 1.0E-31 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS13865 270f8eb88c02575e15898da41612b4ed 570 SMART SM00487 28 235 4.9E-56 T 05-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_RS13865 270f8eb88c02575e15898da41612b4ed 570 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 390 50.901 T 05-07-2017 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 AC028_RS13865 270f8eb88c02575e15898da41612b4ed 570 Gene3D G3DSA:3.40.50.300 9 224 3.2E-73 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS13865 270f8eb88c02575e15898da41612b4ed 570 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 164 172 - T 05-07-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AC028_RS13865 270f8eb88c02575e15898da41612b4ed 570 Gene3D G3DSA:3.40.50.300 225 384 2.0E-48 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS13865 270f8eb88c02575e15898da41612b4ed 570 Pfam PF00270 DEAD/DEAH box helicase 33 206 3.8E-46 T 05-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AC028_RS11700 d8a59cdb96638f9a5058a7ee8c50ee16 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 43.195 T 05-07-2017 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11700 d8a59cdb96638f9a5058a7ee8c50ee16 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 05-07-2017 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11700 d8a59cdb96638f9a5058a7ee8c50ee16 180 Pfam PF00281 Ribosomal protein L5 25 81 1.1E-27 T 05-07-2017 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11700 d8a59cdb96638f9a5058a7ee8c50ee16 180 SUPERFAMILY SSF55282 4 180 5.89E-77 T 05-07-2017 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11700 d8a59cdb96638f9a5058a7ee8c50ee16 180 PIRSF PIRSF002161 1 180 9.1E-66 T 05-07-2017 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11700 d8a59cdb96638f9a5058a7ee8c50ee16 180 Pfam PF00673 ribosomal L5P family C-terminus 85 178 8.1E-40 T 05-07-2017 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11700 d8a59cdb96638f9a5058a7ee8c50ee16 180 Gene3D G3DSA:3.30.1440.10 3 180 2.1E-78 T 05-07-2017 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS00800 9c795079ca23b6bb1e6a2bd4c960b47a 473 SUPERFAMILY SSF103473 251 466 1.2E-60 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS00800 9c795079ca23b6bb1e6a2bd4c960b47a 473 SUPERFAMILY SSF103473 12 203 1.2E-60 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS00800 9c795079ca23b6bb1e6a2bd4c960b47a 473 Pfam PF07690 Major Facilitator Superfamily 22 413 7.9E-42 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS00800 9c795079ca23b6bb1e6a2bd4c960b47a 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 3.4E-10 T 05-07-2017 AC028_RS00800 9c795079ca23b6bb1e6a2bd4c960b47a 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 3.4E-10 T 05-07-2017 AC028_RS00800 9c795079ca23b6bb1e6a2bd4c960b47a 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 206 224 3.4E-10 T 05-07-2017 AC028_RS00800 9c795079ca23b6bb1e6a2bd4c960b47a 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 3.4E-10 T 05-07-2017 AC028_RS00800 9c795079ca23b6bb1e6a2bd4c960b47a 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 3.4E-10 T 05-07-2017 AC028_RS00800 9c795079ca23b6bb1e6a2bd4c960b47a 473 Gene3D G3DSA:1.20.1250.20 272 467 2.9E-15 T 05-07-2017 AC028_RS00800 9c795079ca23b6bb1e6a2bd4c960b47a 473 Gene3D G3DSA:1.20.1250.20 16 200 2.6E-30 T 05-07-2017 AC028_RS00800 9c795079ca23b6bb1e6a2bd4c960b47a 473 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 20 420 8.0E-74 T 05-07-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AC028_RS19725 19d9dc6cdd44d38adf411d6cbf6d85e6 322 Pfam PF00953 Glycosyl transferase family 4 77 210 3.2E-23 T 05-07-2017 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 AC028_RS08800 30238a40478ae0a9156cef10efbbd610 496 Pfam PF00083 Sugar (and other) transporter 40 454 2.8E-45 T 05-07-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AC028_RS08800 30238a40478ae0a9156cef10efbbd610 496 Gene3D G3DSA:1.20.1250.20 264 448 7.0E-21 T 05-07-2017 AC028_RS08800 30238a40478ae0a9156cef10efbbd610 496 Gene3D G3DSA:1.20.1250.20 34 246 1.9E-27 T 05-07-2017 AC028_RS08800 30238a40478ae0a9156cef10efbbd610 496 ProSitePatterns PS00217 Sugar transport proteins signature 2. 146 171 - T 05-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AC028_RS08800 30238a40478ae0a9156cef10efbbd610 496 ProSitePatterns PS00216 Sugar transport proteins signature 1. 321 337 - T 05-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AC028_RS08800 30238a40478ae0a9156cef10efbbd610 496 SUPERFAMILY SSF103473 34 450 2.35E-71 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS19830 7ca767f9e8f0b1f5071ee7e6a8ef1ee9 99 Pfam PF03795 YCII-related domain 2 95 9.6E-26 T 05-07-2017 IPR005545 YCII-related AC028_RS19830 7ca767f9e8f0b1f5071ee7e6a8ef1ee9 99 Gene3D G3DSA:3.30.70.1060 2 97 2.9E-33 T 05-07-2017 AC028_RS19830 7ca767f9e8f0b1f5071ee7e6a8ef1ee9 99 SUPERFAMILY SSF54909 2 97 4.29E-30 T 05-07-2017 IPR011008 Dimeric alpha-beta barrel AC028_RS05870 02563af66d93289fad8664488e5cf3c6 833 SMART SM00490 204 330 6.9E-14 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS05870 02563af66d93289fad8664488e5cf3c6 833 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 6 832 0.0 T 05-07-2017 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type AC028_RS05870 02563af66d93289fad8664488e5cf3c6 833 SUPERFAMILY SSF52540 19 341 1.37E-50 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS05870 02563af66d93289fad8664488e5cf3c6 833 Pfam PF00271 Helicase conserved C-terminal domain 211 329 7.9E-14 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS05870 02563af66d93289fad8664488e5cf3c6 833 Gene3D G3DSA:3.40.50.300 7 164 4.3E-46 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS05870 02563af66d93289fad8664488e5cf3c6 833 Pfam PF08482 ATP-dependent helicase C-terminal 682 819 1.0E-50 T 05-07-2017 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AC028_RS05870 02563af66d93289fad8664488e5cf3c6 833 PIRSF PIRSF005496 1 833 0.0 T 05-07-2017 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type AC028_RS05870 02563af66d93289fad8664488e5cf3c6 833 Pfam PF04408 Helicase associated domain (HA2) 386 462 3.3E-16 T 05-07-2017 IPR007502 Helicase-associated domain GO:0004386 AC028_RS05870 02563af66d93289fad8664488e5cf3c6 833 SMART SM00487 4 188 7.7E-15 T 05-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_RS05870 02563af66d93289fad8664488e5cf3c6 833 Gene3D G3DSA:3.40.50.300 209 342 1.4E-14 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS05870 02563af66d93289fad8664488e5cf3c6 833 SMART SM00847 385 481 1.8E-11 T 05-07-2017 IPR007502 Helicase-associated domain GO:0004386 AC028_RS00325 ee4c33c64d480c0172730c551b6c4db2 420 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 131 399 7.6E-86 T 05-07-2017 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 AC028_RS00325 ee4c33c64d480c0172730c551b6c4db2 420 SUPERFAMILY SSF101960 16 400 3.79E-94 T 05-07-2017 AC028_RS00325 ee4c33c64d480c0172730c551b6c4db2 420 Pfam PF01458 Uncharacterized protein family (UPF0051) 167 390 1.1E-63 T 05-07-2017 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AC028_RS00165 49df47b7722f753d26de4b59fdf1232e 332 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 05-07-2017 IPR000092 Polyprenyl synthetase GO:0008299 AC028_RS00165 49df47b7722f753d26de4b59fdf1232e 332 Gene3D G3DSA:1.10.600.10 16 331 2.9E-102 T 05-07-2017 IPR008949 Isoprenoid synthase domain AC028_RS00165 49df47b7722f753d26de4b59fdf1232e 332 Pfam PF00348 Polyprenyl synthetase 42 273 3.7E-75 T 05-07-2017 IPR000092 Polyprenyl synthetase GO:0008299 AC028_RS00165 49df47b7722f753d26de4b59fdf1232e 332 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 91 105 - T 05-07-2017 IPR000092 Polyprenyl synthetase GO:0008299 AC028_RS00165 49df47b7722f753d26de4b59fdf1232e 332 SUPERFAMILY SSF48576 15 331 4.32E-99 T 05-07-2017 IPR008949 Isoprenoid synthase domain AC028_RS01460 04b497ccd3be1cb58732081e51905120 175 Pfam PF13673 Acetyltransferase (GNAT) domain 31 151 1.3E-13 T 05-07-2017 IPR000182 GNAT domain GO:0008080 AC028_RS01460 04b497ccd3be1cb58732081e51905120 175 SUPERFAMILY SSF55729 2 158 6.42E-34 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS01460 04b497ccd3be1cb58732081e51905120 175 Gene3D G3DSA:3.40.630.30 1 158 6.8E-40 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS02270 6da91a087d95c82aad5c7b7f31bfc6b0 391 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 388 38.338 T 05-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02270 6da91a087d95c82aad5c7b7f31bfc6b0 391 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 05-07-2017 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02270 6da91a087d95c82aad5c7b7f31bfc6b0 391 Gene3D G3DSA:3.40.50.1270 175 376 1.1E-84 T 05-07-2017 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02270 6da91a087d95c82aad5c7b7f31bfc6b0 391 Pfam PF00162 Phosphoglycerate kinase 6 378 5.7E-140 T 05-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02270 6da91a087d95c82aad5c7b7f31bfc6b0 391 PIRSF PIRSF000724 1 391 4.6E-133 T 05-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02270 6da91a087d95c82aad5c7b7f31bfc6b0 391 Gene3D G3DSA:3.40.50.1260 5 174 8.3E-62 T 05-07-2017 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02270 6da91a087d95c82aad5c7b7f31bfc6b0 391 PRINTS PR00477 Phosphoglycerate kinase family signature 308 333 2.2E-81 T 05-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02270 6da91a087d95c82aad5c7b7f31bfc6b0 391 PRINTS PR00477 Phosphoglycerate kinase family signature 341 352 2.2E-81 T 05-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02270 6da91a087d95c82aad5c7b7f31bfc6b0 391 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.2E-81 T 05-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02270 6da91a087d95c82aad5c7b7f31bfc6b0 391 PRINTS PR00477 Phosphoglycerate kinase family signature 364 381 2.2E-81 T 05-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02270 6da91a087d95c82aad5c7b7f31bfc6b0 391 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.2E-81 T 05-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02270 6da91a087d95c82aad5c7b7f31bfc6b0 391 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.2E-81 T 05-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02270 6da91a087d95c82aad5c7b7f31bfc6b0 391 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.2E-81 T 05-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02270 6da91a087d95c82aad5c7b7f31bfc6b0 391 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.2E-81 T 05-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02270 6da91a087d95c82aad5c7b7f31bfc6b0 391 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.2E-81 T 05-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS02270 6da91a087d95c82aad5c7b7f31bfc6b0 391 SUPERFAMILY SSF53748 3 387 1.41E-144 T 05-07-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS09175 0dcd446cf0802675770c7705f8ba651d 731 Gene3D G3DSA:3.20.20.80 176 503 9.0E-155 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS09175 0dcd446cf0802675770c7705f8ba651d 731 PIRSF PIRSF029900 16 731 0.0 T 05-07-2017 IPR011395 Alpha glucuronidase GO:0005576|GO:0045493|GO:0046559 AC028_RS09175 0dcd446cf0802675770c7705f8ba651d 731 SUPERFAMILY SSF51445 177 730 1.05E-248 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS09175 0dcd446cf0802675770c7705f8ba651d 731 Gene3D G3DSA:3.90.1330.10 505 729 1.5E-96 T 05-07-2017 IPR011099 Glycosyl hydrolase family 67, C-terminal GO:0005576|GO:0045493|GO:0046559 AC028_RS09175 0dcd446cf0802675770c7705f8ba651d 731 Pfam PF07477 Glycosyl hydrolase family 67 C-terminus 484 707 1.9E-96 T 05-07-2017 IPR011099 Glycosyl hydrolase family 67, C-terminal GO:0005576|GO:0045493|GO:0046559 AC028_RS09175 0dcd446cf0802675770c7705f8ba651d 731 Gene3D G3DSA:3.30.379.10 36 170 8.0E-42 T 05-07-2017 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AC028_RS09175 0dcd446cf0802675770c7705f8ba651d 731 Pfam PF07488 Glycosyl hydrolase family 67 middle domain 159 482 2.7E-148 T 05-07-2017 IPR011100 Glycosyl hydrolase family 67, catalytic domain GO:0005576|GO:0045493|GO:0046559 AC028_RS09175 0dcd446cf0802675770c7705f8ba651d 731 Pfam PF03648 Glycosyl hydrolase family 67 N-terminus 40 155 1.7E-25 T 05-07-2017 IPR005154 Alpha glucuronidase, N-terminal GO:0045493|GO:0046559 AC028_RS09175 0dcd446cf0802675770c7705f8ba651d 731 SUPERFAMILY SSF55545 35 175 9.24E-38 T 05-07-2017 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 AC028_RS05855 4192e84b638d2df9542f2fd08244bd63 190 Pfam PF00849 RNA pseudouridylate synthase 2 149 1.3E-18 T 05-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS05855 4192e84b638d2df9542f2fd08244bd63 190 SUPERFAMILY SSF55120 2 179 2.24E-42 T 05-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS05855 4192e84b638d2df9542f2fd08244bd63 190 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 6 177 1.3E-53 T 05-07-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AC028_RS05855 4192e84b638d2df9542f2fd08244bd63 190 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 39 53 - T 05-07-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AC028_RS07550 ae81fac02e35f6942466ce634699b46a 196 ProSitePatterns PS00194 Thioredoxin family active site. 73 91 - T 05-07-2017 IPR017937 Thioredoxin, conserved site GO:0045454 AC028_RS07550 ae81fac02e35f6942466ce634699b46a 196 Gene3D G3DSA:3.40.30.10 5 182 1.0E-17 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS07550 ae81fac02e35f6942466ce634699b46a 196 Pfam PF00578 AhpC/TSA family 49 163 3.0E-5 T 05-07-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AC028_RS07550 ae81fac02e35f6942466ce634699b46a 196 SUPERFAMILY SSF52833 42 184 1.41E-19 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS08565 fc6ef65903e7a986bf8ba31308a7ed74 714 Gene3D G3DSA:3.20.20.190 270 406 3.5E-22 T 05-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AC028_RS08565 fc6ef65903e7a986bf8ba31308a7ed74 714 SUPERFAMILY SSF51695 273 392 1.81E-21 T 05-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AC028_RS08565 fc6ef65903e7a986bf8ba31308a7ed74 714 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 274 515 2.9E-32 T 05-07-2017 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AC028_RS12080 19d31eca505ab5141a29ed05774cbb5d 428 Gene3D G3DSA:1.10.8.60 318 417 1.3E-37 T 05-07-2017 AC028_RS12080 19d31eca505ab5141a29ed05774cbb5d 428 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 2.2E-50 T 05-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AC028_RS12080 19d31eca505ab5141a29ed05774cbb5d 428 SMART SM00382 113 266 1.1E-10 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS12080 19d31eca505ab5141a29ed05774cbb5d 428 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 9 417 53.387 T 05-07-2017 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AC028_RS12080 19d31eca505ab5141a29ed05774cbb5d 428 SMART SM01086 319 414 7.6E-34 T 05-07-2017 IPR019489 Clp ATPase, C-terminal AC028_RS12080 19d31eca505ab5141a29ed05774cbb5d 428 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 14 414 6.1E-206 T 05-07-2017 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AC028_RS12080 19d31eca505ab5141a29ed05774cbb5d 428 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 397 4.6E-17 T 05-07-2017 IPR019489 Clp ATPase, C-terminal AC028_RS12080 19d31eca505ab5141a29ed05774cbb5d 428 SMART SM00994 15 54 3.7E-24 T 05-07-2017 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AC028_RS12080 19d31eca505ab5141a29ed05774cbb5d 428 SUPERFAMILY SSF52540 64 407 5.94E-71 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12080 19d31eca505ab5141a29ed05774cbb5d 428 Pfam PF06689 ClpX C4-type zinc finger 16 53 7.8E-21 T 05-07-2017 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AC028_RS12080 19d31eca505ab5141a29ed05774cbb5d 428 Gene3D G3DSA:3.40.50.300 67 255 2.5E-51 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12080 19d31eca505ab5141a29ed05774cbb5d 428 Gene3D G3DSA:3.40.50.300 296 313 2.5E-51 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12080 19d31eca505ab5141a29ed05774cbb5d 428 SUPERFAMILY SSF57716 16 51 9.27E-12 T 05-07-2017 AC028_RS15610 fe3f682b9e9c01b14be6ae80060d96fb 202 Pfam PF01694 Rhomboid family 35 186 4.9E-26 T 05-07-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AC028_RS15610 fe3f682b9e9c01b14be6ae80060d96fb 202 SUPERFAMILY SSF144091 2 189 6.67E-34 T 05-07-2017 AC028_RS15610 fe3f682b9e9c01b14be6ae80060d96fb 202 Gene3D G3DSA:1.20.1540.10 2 186 2.0E-35 T 05-07-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AC028_RS05740 a161c71f92ca6e205925107b8b24e6ed 180 SMART SM00953 23 156 3.1E-17 T 05-07-2017 IPR014914 RES domain AC028_RS05740 a161c71f92ca6e205925107b8b24e6ed 180 Pfam PF08808 RES domain 10 163 6.7E-24 T 05-07-2017 IPR014914 RES domain AC028_RS18785 9de1f6696dfbe65176318afe1f328849 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 399 8.2E-141 T 05-07-2017 IPR002155 Thiolase GO:0008152|GO:0016747 AC028_RS18785 9de1f6696dfbe65176318afe1f328849 401 SUPERFAMILY SSF53901 7 278 8.52E-75 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS18785 9de1f6696dfbe65176318afe1f328849 401 Pfam PF00108 Thiolase, N-terminal domain 9 271 4.0E-74 T 05-07-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AC028_RS18785 9de1f6696dfbe65176318afe1f328849 401 Gene3D G3DSA:3.40.47.10 285 400 6.0E-66 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS18785 9de1f6696dfbe65176318afe1f328849 401 Gene3D G3DSA:3.40.47.10 149 189 6.0E-66 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS18785 9de1f6696dfbe65176318afe1f328849 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 05-07-2017 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AC028_RS18785 9de1f6696dfbe65176318afe1f328849 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 05-07-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AC028_RS18785 9de1f6696dfbe65176318afe1f328849 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 05-07-2017 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AC028_RS18785 9de1f6696dfbe65176318afe1f328849 401 PIRSF PIRSF000429 2 401 3.6E-127 T 05-07-2017 IPR002155 Thiolase GO:0008152|GO:0016747 AC028_RS18785 9de1f6696dfbe65176318afe1f328849 401 Pfam PF02803 Thiolase, C-terminal domain 278 399 1.8E-45 T 05-07-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AC028_RS18785 9de1f6696dfbe65176318afe1f328849 401 SUPERFAMILY SSF53901 279 399 3.62E-43 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS18785 9de1f6696dfbe65176318afe1f328849 401 Gene3D G3DSA:3.40.47.10 190 284 1.3E-66 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS18785 9de1f6696dfbe65176318afe1f328849 401 Gene3D G3DSA:3.40.47.10 8 130 1.3E-66 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS02605 f77a20306c6b767c66c95477937eb2da 442 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 3 440 54.861 T 05-07-2017 IPR022846 Xaa-Pro dipeptidase GO:0016795 AC028_RS02605 f77a20306c6b767c66c95477937eb2da 442 Gene3D G3DSA:3.90.230.10 158 436 1.8E-51 T 05-07-2017 IPR000994 Peptidase M24, structural domain AC028_RS02605 f77a20306c6b767c66c95477937eb2da 442 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 332 344 - T 05-07-2017 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AC028_RS02605 f77a20306c6b767c66c95477937eb2da 442 Pfam PF00557 Metallopeptidase family M24 167 427 2.5E-40 T 05-07-2017 IPR000994 Peptidase M24, structural domain AC028_RS02605 f77a20306c6b767c66c95477937eb2da 442 SUPERFAMILY SSF55920 161 435 3.14E-52 T 05-07-2017 IPR000994 Peptidase M24, structural domain AC028_RS05185 68efe6c0bf29beb7903ac8fd53b2ec2f 214 Pfam PF14300 Domain of unknown function (DUF4375) 97 204 2.0E-10 T 05-07-2017 IPR025402 Domain of unknown function DUF4375 AC028_RS18355 c97a40503c0f82b581bd5e3b139fe469 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 1.0E-37 T 05-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AC028_RS18355 c97a40503c0f82b581bd5e3b139fe469 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 1.0E-37 T 05-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AC028_RS18355 c97a40503c0f82b581bd5e3b139fe469 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 1.0E-37 T 05-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AC028_RS18355 c97a40503c0f82b581bd5e3b139fe469 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 1.0E-37 T 05-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AC028_RS18355 c97a40503c0f82b581bd5e3b139fe469 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 1.0E-37 T 05-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AC028_RS18355 c97a40503c0f82b581bd5e3b139fe469 376 Gene3D G3DSA:3.40.1690.10 219 355 3.6E-60 T 05-07-2017 IPR029025 Type III secretion system substrate exporter, C-terminal AC028_RS18355 c97a40503c0f82b581bd5e3b139fe469 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 348 3.5E-120 T 05-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AC028_RS18355 c97a40503c0f82b581bd5e3b139fe469 376 SUPERFAMILY SSF160544 245 352 7.85E-40 T 05-07-2017 IPR029025 Type III secretion system substrate exporter, C-terminal AC028_RS18355 c97a40503c0f82b581bd5e3b139fe469 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 9 354 8.2E-136 T 05-07-2017 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 AC028_RS15545 e088ec1cb26fccb4bf9e4084c75eadf4 829 Gene3D G3DSA:1.10.439.10 66 205 7.5E-41 T 05-07-2017 IPR023343 Penicillin amidase type, domain1 GO:0016811 AC028_RS15545 e088ec1cb26fccb4bf9e4084c75eadf4 829 Pfam PF01804 Penicillin amidase 70 818 5.7E-125 T 05-07-2017 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 AC028_RS15545 e088ec1cb26fccb4bf9e4084c75eadf4 829 Gene3D G3DSA:3.60.20.10 278 363 5.4E-78 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS15545 e088ec1cb26fccb4bf9e4084c75eadf4 829 Gene3D G3DSA:3.60.20.10 427 669 5.4E-78 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS15545 e088ec1cb26fccb4bf9e4084c75eadf4 829 SUPERFAMILY SSF56235 66 827 7.46E-163 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS15545 e088ec1cb26fccb4bf9e4084c75eadf4 829 PIRSF PIRSF001227 29 827 5.0E-138 T 05-07-2017 IPR014395 Penicillin acylase GO:0016811 AC028_RS15545 e088ec1cb26fccb4bf9e4084c75eadf4 829 Gene3D G3DSA:2.30.120.10 370 418 2.6E-8 T 05-07-2017 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 SUPERFAMILY SSF141072 232 345 6.15E-22 T 05-07-2017 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 SUPERFAMILY SSF103515 1476 1752 5.36E-42 T 05-07-2017 IPR005546 Autotransporter beta-domain AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 SUPERFAMILY SSF49313 667 733 4.0E-7 T 05-07-2017 IPR015919 Cadherin-like GO:0005509|GO:0016020 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 Pfam PF05345 Putative Ig domain 870 910 1.9E-8 T 05-07-2017 IPR008009 Putative Ig AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 Pfam PF05345 Putative Ig domain 1048 1089 9.4E-8 T 05-07-2017 IPR008009 Putative Ig AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 Pfam PF05345 Putative Ig domain 960 1000 1.1E-8 T 05-07-2017 IPR008009 Putative Ig AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 Pfam PF05345 Putative Ig domain 601 641 1.7E-8 T 05-07-2017 IPR008009 Putative Ig AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 Pfam PF05345 Putative Ig domain 690 731 6.3E-10 T 05-07-2017 IPR008009 Putative Ig AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 Pfam PF05345 Putative Ig domain 781 821 3.4E-8 T 05-07-2017 IPR008009 Putative Ig AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 Pfam PF05345 Putative Ig domain 1140 1179 6.0E-7 T 05-07-2017 IPR008009 Putative Ig AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 Pfam PF03160 Calx-beta domain 454 548 1.1E-18 T 05-07-2017 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 Pfam PF03160 Calx-beta domain 336 436 3.9E-10 T 05-07-2017 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 Pfam PF03160 Calx-beta domain 225 321 4.8E-6 T 05-07-2017 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 Pfam PF03160 Calx-beta domain 117 208 6.1E-6 T 05-07-2017 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 SUPERFAMILY SSF49313 572 656 8.63E-9 T 05-07-2017 IPR015919 Cadherin-like GO:0005509|GO:0016020 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 SUPERFAMILY SSF49313 755 837 3.92E-9 T 05-07-2017 IPR015919 Cadherin-like GO:0005509|GO:0016020 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 SUPERFAMILY SSF141072 126 234 4.45E-16 T 05-07-2017 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 SUPERFAMILY SSF141072 459 598 2.75E-31 T 05-07-2017 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 SUPERFAMILY SSF49313 1117 1193 6.04E-8 T 05-07-2017 IPR015919 Cadherin-like GO:0005509|GO:0016020 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 SMART SM00736 571 661 0.052 T 05-07-2017 IPR006644 Dystroglycan-type cadherin-like GO:0016020 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 SMART SM00736 750 840 0.071 T 05-07-2017 IPR006644 Dystroglycan-type cadherin-like GO:0016020 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 SMART SM00736 931 1019 0.08 T 05-07-2017 IPR006644 Dystroglycan-type cadherin-like GO:0016020 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 SUPERFAMILY SSF49313 937 1016 7.38E-9 T 05-07-2017 IPR015919 Cadherin-like GO:0005509|GO:0016020 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 SMART SM00869 1480 1744 1.5E-41 T 05-07-2017 IPR005546 Autotransporter beta-domain AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 SUPERFAMILY SSF49313 1027 1105 1.26E-8 T 05-07-2017 IPR015919 Cadherin-like GO:0005509|GO:0016020 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 SMART SM00237 335 436 0.0022 T 05-07-2017 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 SMART SM00237 224 322 0.0044 T 05-07-2017 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 SMART SM00237 115 211 0.041 T 05-07-2017 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 SMART SM00237 448 548 3.1E-12 T 05-07-2017 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 SUPERFAMILY SSF141072 346 458 7.19E-21 T 05-07-2017 AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 Pfam PF03797 Autotransporter beta-domain 1479 1738 1.1E-44 T 05-07-2017 IPR005546 Autotransporter beta-domain AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 Gene3D G3DSA:2.60.40.10 571 655 2.4E-4 T 05-07-2017 IPR013783 Immunoglobulin-like fold AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 Gene3D G3DSA:2.60.40.10 670 734 6.6E-5 T 05-07-2017 IPR013783 Immunoglobulin-like fold AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 Gene3D G3DSA:2.60.40.10 1028 1105 2.0E-6 T 05-07-2017 IPR013783 Immunoglobulin-like fold AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 Gene3D G3DSA:2.60.40.10 850 925 1.4E-6 T 05-07-2017 IPR013783 Immunoglobulin-like fold AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 Gene3D G3DSA:2.60.40.10 1140 1193 1.6E-4 T 05-07-2017 IPR013783 Immunoglobulin-like fold AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 Gene3D G3DSA:2.60.40.10 931 1016 8.5E-5 T 05-07-2017 IPR013783 Immunoglobulin-like fold AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 Gene3D G3DSA:2.60.40.10 759 837 8.0E-5 T 05-07-2017 IPR013783 Immunoglobulin-like fold AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 Gene3D G3DSA:2.40.128.130 1473 1752 1.6E-45 T 05-07-2017 IPR005546 Autotransporter beta-domain AC028_RS06810 24d3662a725b39a3a5c506ad1d10d6a5 1755 SUPERFAMILY SSF49313 848 925 2.35E-8 T 05-07-2017 IPR015919 Cadherin-like GO:0005509|GO:0016020 AC028_RS10945 83c108eecedd3435bb266ace519bddc3 423 Gene3D G3DSA:3.30.565.10 280 421 1.4E-33 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS10945 83c108eecedd3435bb266ace519bddc3 423 SUPERFAMILY SSF55874 280 421 3.01E-33 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS10945 83c108eecedd3435bb266ace519bddc3 423 SMART SM00387 322 422 4.6E-25 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS10945 83c108eecedd3435bb266ace519bddc3 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 7.4E-12 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS10945 83c108eecedd3435bb266ace519bddc3 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 7.4E-12 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS10945 83c108eecedd3435bb266ace519bddc3 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 7.4E-12 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS10945 83c108eecedd3435bb266ace519bddc3 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 7.4E-12 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS10945 83c108eecedd3435bb266ace519bddc3 423 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 420 1.2E-18 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS10945 83c108eecedd3435bb266ace519bddc3 423 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 276 1.4E-11 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS10945 83c108eecedd3435bb266ace519bddc3 423 SMART SM00388 213 279 1.1E-13 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS10945 83c108eecedd3435bb266ace519bddc3 423 SUPERFAMILY SSF47384 197 275 3.14E-13 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS10945 83c108eecedd3435bb266ace519bddc3 423 Gene3D G3DSA:1.10.287.130 208 275 9.7E-13 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS20490 cb8e3d69a580f0089a7fd1ad7ced677a 169 SUPERFAMILY SSF50341 18 157 2.49E-32 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS20490 cb8e3d69a580f0089a7fd1ad7ced677a 169 Pfam PF01584 CheW-like domain 18 156 2.1E-33 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS20490 cb8e3d69a580f0089a7fd1ad7ced677a 169 SMART SM00260 14 155 1.5E-25 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS20490 cb8e3d69a580f0089a7fd1ad7ced677a 169 Gene3D G3DSA:2.40.50.180 56 95 3.7E-7 T 05-07-2017 AC028_RS11150 3ba9b4fcc1e320be2c2a3d175b10ab04 298 SUPERFAMILY SSF53213 2 285 7.32E-91 T 05-07-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AC028_RS11150 3ba9b4fcc1e320be2c2a3d175b10ab04 298 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 271 8.0E-80 T 05-07-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AC028_RS11150 3ba9b4fcc1e320be2c2a3d175b10ab04 298 Gene3D G3DSA:3.40.830.10 1 289 9.4E-107 T 05-07-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AC028_RS15850 17c57890df5f4c3bcd4fca2c3877053a 247 SUPERFAMILY SSF52540 92 235 4.6E-21 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS15850 17c57890df5f4c3bcd4fca2c3877053a 247 SMART SM00382 98 230 7.2E-4 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS15850 17c57890df5f4c3bcd4fca2c3877053a 247 Gene3D G3DSA:3.40.50.300 91 228 3.6E-22 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS15850 17c57890df5f4c3bcd4fca2c3877053a 247 Pfam PF08483 IstB-like ATP binding N-terminal 25 52 6.9E-7 T 05-07-2017 IPR013690 IstB-like ATP binding N-terminal AC028_RS15850 17c57890df5f4c3bcd4fca2c3877053a 247 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 102 115 - T 05-07-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AC028_RS15850 17c57890df5f4c3bcd4fca2c3877053a 247 PIRSF PIRSF003073 1 247 2.1E-62 T 05-07-2017 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein AC028_RS15850 17c57890df5f4c3bcd4fca2c3877053a 247 Pfam PF01695 IstB-like ATP binding protein 54 229 1.4E-54 T 05-07-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 AC028_RS20715 6d1d611d477de4b7a30f637cbe1a0ae9 281 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 30 272 8.7E-67 T 05-07-2017 IPR003786 Protein FdhD GO:0016783 AC028_RS20715 6d1d611d477de4b7a30f637cbe1a0ae9 281 PIRSF PIRSF015626 1 274 1.9E-87 T 05-07-2017 IPR003786 Protein FdhD GO:0016783 AC028_RS20715 6d1d611d477de4b7a30f637cbe1a0ae9 281 SUPERFAMILY SSF53927 14 271 1.53E-81 T 05-07-2017 IPR016193 Cytidine deaminase-like GO:0003824 AC028_RS20715 6d1d611d477de4b7a30f637cbe1a0ae9 281 Pfam PF02634 FdhD/NarQ family 34 271 9.2E-80 T 05-07-2017 IPR003786 Protein FdhD GO:0016783 AC028_RS20715 6d1d611d477de4b7a30f637cbe1a0ae9 281 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 12 272 35.114 T 05-07-2017 IPR003786 Protein FdhD GO:0016783 AC028_RS20715 6d1d611d477de4b7a30f637cbe1a0ae9 281 Gene3D G3DSA:3.10.20.10 36 121 4.9E-27 T 05-07-2017 AC028_RS20715 6d1d611d477de4b7a30f637cbe1a0ae9 281 Gene3D G3DSA:3.40.140.10 135 273 5.3E-53 T 05-07-2017 AC028_RS10585 fbe3649fab694edf1ead022b748ce2fd 255 Pfam PF05742 Transport and Golgi organisation 2 1 237 4.5E-53 T 05-07-2017 IPR008551 Transport and Golgi organisation protein 2 AC028_RS05470 95a094ba1afd25be9268efa5b1a889cd 134 Gene3D G3DSA:3.40.50.970 1 116 8.5E-27 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS05470 95a094ba1afd25be9268efa5b1a889cd 134 SUPERFAMILY SSF52518 1 124 4.88E-28 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS05470 95a094ba1afd25be9268efa5b1a889cd 134 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 1 88 8.7E-18 T 05-07-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AC028_RS13135 61aebb9c8cd405840ec96a789e67f76d 549 SUPERFAMILY SSF75005 39 347 1.71E-88 T 05-07-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AC028_RS13135 61aebb9c8cd405840ec96a789e67f76d 549 SUPERFAMILY SSF49899 361 547 1.5E-32 T 05-07-2017 IPR013320 Concanavalin A-like lectin/glucanase domain AC028_RS13135 61aebb9c8cd405840ec96a789e67f76d 549 Gene3D G3DSA:2.60.120.200 362 548 1.8E-29 T 05-07-2017 IPR013320 Concanavalin A-like lectin/glucanase domain AC028_RS13135 61aebb9c8cd405840ec96a789e67f76d 549 Gene3D G3DSA:2.115.10.20 38 339 2.8E-89 T 05-07-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AC028_RS13135 61aebb9c8cd405840ec96a789e67f76d 549 Pfam PF04616 Glycosyl hydrolases family 43 39 331 1.2E-98 T 05-07-2017 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AC028_RS11450 06b5c61bc82adfee667b2b7c1014a789 330 SUPERFAMILY SSF51445 3 238 3.74E-45 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS11450 06b5c61bc82adfee667b2b7c1014a789 330 Gene3D G3DSA:2.60.40.1180 232 329 1.2E-30 T 05-07-2017 IPR013780 Glycosyl hydrolase, all-beta AC028_RS11450 06b5c61bc82adfee667b2b7c1014a789 330 SUPERFAMILY SSF51011 235 329 3.14E-25 T 05-07-2017 AC028_RS11450 06b5c61bc82adfee667b2b7c1014a789 330 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 27 86 1.5E-4 T 05-07-2017 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 AC028_RS11450 06b5c61bc82adfee667b2b7c1014a789 330 Gene3D G3DSA:3.20.20.80 6 231 6.3E-54 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS11450 06b5c61bc82adfee667b2b7c1014a789 330 Pfam PF17189 Glycosyl hydrolase family 30 beta sandwich domain 239 327 1.5E-11 T 05-07-2017 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 AC028_RS13730 eef3f78c4b0bd8faeba136cf2d5b8b75 470 Pfam PF12913 SH3 domain (SH3b1 type) 160 206 3.6E-17 T 05-07-2017 AC028_RS13730 eef3f78c4b0bd8faeba136cf2d5b8b75 470 PIRSF PIRSF019015 3 464 4.1E-72 T 05-07-2017 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type AC028_RS13730 eef3f78c4b0bd8faeba136cf2d5b8b75 470 SUPERFAMILY SSF54001 310 419 2.06E-17 T 05-07-2017 AC028_RS13730 eef3f78c4b0bd8faeba136cf2d5b8b75 470 Pfam PF00877 NlpC/P60 family 326 417 4.2E-11 T 05-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain AC028_RS13730 eef3f78c4b0bd8faeba136cf2d5b8b75 470 Gene3D G3DSA:3.90.1720.10 311 419 4.8E-20 T 05-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain AC028_RS13730 eef3f78c4b0bd8faeba136cf2d5b8b75 470 Pfam PF12914 SH3 domain of SH3b2 type 217 265 3.5E-6 T 05-07-2017 IPR026864 SH3b2-type SH3 domain AC028_RS00470 1fd574f48007bcf9cf840eaab0f1d44f 75 Gene3D G3DSA:3.30.300.90 3 74 1.8E-24 T 05-07-2017 IPR002634 BolA protein AC028_RS00470 1fd574f48007bcf9cf840eaab0f1d44f 75 Pfam PF01722 BolA-like protein 20 74 4.3E-19 T 05-07-2017 IPR002634 BolA protein AC028_RS00470 1fd574f48007bcf9cf840eaab0f1d44f 75 SUPERFAMILY SSF82657 3 74 1.09E-24 T 05-07-2017 IPR002634 BolA protein AC028_RS00470 1fd574f48007bcf9cf840eaab0f1d44f 75 PIRSF PIRSF003113 2 75 1.5E-23 T 05-07-2017 IPR002634 BolA protein AC028_RS10500 57ff432e3c0a5e7523b4d51ac8f93902 324 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 322 3.5E-105 T 05-07-2017 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AC028_RS10500 57ff432e3c0a5e7523b4d51ac8f93902 324 SUPERFAMILY SSF55326 3 134 1.92E-31 T 05-07-2017 AC028_RS10500 57ff432e3c0a5e7523b4d51ac8f93902 324 Gene3D G3DSA:3.30.1330.10 1 137 3.1E-43 T 05-07-2017 IPR016188 PurM-like, N-terminal domain AC028_RS10500 57ff432e3c0a5e7523b4d51ac8f93902 324 Pfam PF02769 AIR synthase related protein, C-terminal domain 147 305 5.5E-12 T 05-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AC028_RS10500 57ff432e3c0a5e7523b4d51ac8f93902 324 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 134 4.1E-22 T 05-07-2017 IPR016188 PurM-like, N-terminal domain AC028_RS10500 57ff432e3c0a5e7523b4d51ac8f93902 324 SUPERFAMILY SSF56042 140 307 7.78E-38 T 05-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AC028_RS10500 57ff432e3c0a5e7523b4d51ac8f93902 324 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 319 28.986 T 05-07-2017 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AC028_RS10500 57ff432e3c0a5e7523b4d51ac8f93902 324 PIRSF PIRSF005303 1 322 3.3E-82 T 05-07-2017 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AC028_RS10500 57ff432e3c0a5e7523b4d51ac8f93902 324 Gene3D G3DSA:3.90.650.10 142 322 1.9E-46 T 05-07-2017 IPR010918 AIR synthase-related protein, C-terminal domain AC028_RS04330 9a78ea477dbecfe672aac1400a656aac 119 SUPERFAMILY SSF103196 6 113 2.09E-5 T 05-07-2017 AC028_RS17320 35bc70ce63ea317160897a21cec668ef 101 SUPERFAMILY SSF75471 4 98 9.94E-29 T 05-07-2017 IPR001890 RNA-binding, CRM domain GO:0003723 AC028_RS17320 35bc70ce63ea317160897a21cec668ef 101 Gene3D G3DSA:3.30.110.60 5 98 5.6E-30 T 05-07-2017 IPR001890 RNA-binding, CRM domain GO:0003723 AC028_RS17320 35bc70ce63ea317160897a21cec668ef 101 SMART SM01103 5 88 2.9E-38 T 05-07-2017 IPR001890 RNA-binding, CRM domain GO:0003723 AC028_RS17320 35bc70ce63ea317160897a21cec668ef 101 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 88 2.9E-21 T 05-07-2017 IPR001890 RNA-binding, CRM domain GO:0003723 AC028_RS17320 35bc70ce63ea317160897a21cec668ef 101 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 5 100 1.2E-26 T 05-07-2017 IPR017924 RNA-binding protein YhbY GO:0003723 AC028_RS17320 35bc70ce63ea317160897a21cec668ef 101 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 11 100 1.0E-33 T 05-07-2017 IPR001890 RNA-binding, CRM domain GO:0003723 AC028_RS20460 57fcb5acba0e68567b6acf6d1a087a2a 872 Gene3D G3DSA:3.30.1490.70 226 251 2.6E-19 T 05-07-2017 AC028_RS20460 57fcb5acba0e68567b6acf6d1a087a2a 872 Gene3D G3DSA:3.30.1490.70 367 409 2.6E-19 T 05-07-2017 AC028_RS20460 57fcb5acba0e68567b6acf6d1a087a2a 872 Pfam PF13298 DNA polymerase Ligase (LigD) 35 139 1.5E-34 T 05-07-2017 IPR014144 DNA ligase D, 3'-phosphoesterase domain AC028_RS20460 57fcb5acba0e68567b6acf6d1a087a2a 872 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 3 158 9.4E-71 T 05-07-2017 IPR014144 DNA ligase D, 3'-phosphoesterase domain AC028_RS20460 57fcb5acba0e68567b6acf6d1a087a2a 872 Gene3D G3DSA:2.40.50.140 413 526 2.2E-29 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS20460 57fcb5acba0e68567b6acf6d1a087a2a 872 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 229 526 3.4E-82 T 05-07-2017 IPR014146 DNA ligase D, ligase domain AC028_RS20460 57fcb5acba0e68567b6acf6d1a087a2a 872 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 238 857 3.8E-174 T 05-07-2017 IPR014143 DNA ligase D AC028_RS20460 57fcb5acba0e68567b6acf6d1a087a2a 872 Gene3D G3DSA:3.30.470.30 252 360 1.4E-25 T 05-07-2017 AC028_RS20460 57fcb5acba0e68567b6acf6d1a087a2a 872 SUPERFAMILY SSF56091 225 409 2.25E-43 T 05-07-2017 AC028_RS20460 57fcb5acba0e68567b6acf6d1a087a2a 872 SUPERFAMILY SSF50249 413 528 2.48E-22 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS20460 57fcb5acba0e68567b6acf6d1a087a2a 872 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 586 828 7.7E-91 T 05-07-2017 IPR014145 DNA ligase D, polymerase domain AC028_RS20460 57fcb5acba0e68567b6acf6d1a087a2a 872 Pfam PF04679 ATP dependent DNA ligase C terminal region 428 522 1.0E-16 T 05-07-2017 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 AC028_RS20460 57fcb5acba0e68567b6acf6d1a087a2a 872 Pfam PF01068 ATP dependent DNA ligase domain 241 409 2.4E-24 T 05-07-2017 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 AC028_RS17230 ed875b96355da5915a901153e40cb203 253 Pfam PF02698 DUF218 domain 68 231 7.7E-27 T 05-07-2017 IPR003848 Domain of unknown function DUF218 AC028_RS17230 ed875b96355da5915a901153e40cb203 253 Gene3D G3DSA:3.40.50.620 67 203 1.6E-22 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS12645 ea5f35aec43f623db590a97918cd410d 842 SUPERFAMILY SSF52540 333 458 2.8E-30 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12645 ea5f35aec43f623db590a97918cd410d 842 SUPERFAMILY SSF52540 148 282 2.8E-30 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12645 ea5f35aec43f623db590a97918cd410d 842 SUPERFAMILY SSF52540 11 94 2.8E-30 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12645 ea5f35aec43f623db590a97918cd410d 842 Pfam PF00005 ABC transporter 511 759 1.3E-6 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS12645 ea5f35aec43f623db590a97918cd410d 842 Gene3D G3DSA:1.10.8.280 162 280 7.5E-21 T 05-07-2017 AC028_RS12645 ea5f35aec43f623db590a97918cd410d 842 Gene3D G3DSA:3.40.50.300 6 58 3.2E-47 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12645 ea5f35aec43f623db590a97918cd410d 842 Gene3D G3DSA:3.40.50.300 720 837 8.1E-51 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12645 ea5f35aec43f623db590a97918cd410d 842 Gene3D G3DSA:3.40.50.300 489 557 8.1E-51 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12645 ea5f35aec43f623db590a97918cd410d 842 Gene3D G3DSA:3.40.50.300 367 484 3.2E-47 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12645 ea5f35aec43f623db590a97918cd410d 842 SUPERFAMILY SSF52540 583 812 1.14E-42 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12645 ea5f35aec43f623db590a97918cd410d 842 SUPERFAMILY SSF52540 506 547 1.14E-42 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12645 ea5f35aec43f623db590a97918cd410d 842 Gene3D G3DSA:1.20.1580.10 100 161 3.6E-29 T 05-07-2017 AC028_RS12645 ea5f35aec43f623db590a97918cd410d 842 Gene3D G3DSA:1.20.1580.10 593 719 3.4E-46 T 05-07-2017 AC028_RS12645 ea5f35aec43f623db590a97918cd410d 842 Gene3D G3DSA:1.20.1580.10 281 366 3.6E-29 T 05-07-2017 AC028_RS12645 ea5f35aec43f623db590a97918cd410d 842 ProSitePatterns PS00211 ABC transporters family signature. 376 390 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS12645 ea5f35aec43f623db590a97918cd410d 842 ProSitePatterns PS00211 ABC transporters family signature. 729 743 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS18615 f79c5a9e0a4f0e9b2bcf3bbfaa9f2530 230 Pfam PF02107 Flagellar L-ring protein 48 228 5.0E-57 T 05-07-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AC028_RS18615 f79c5a9e0a4f0e9b2bcf3bbfaa9f2530 230 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 227 25.193 T 05-07-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AC028_RS18615 f79c5a9e0a4f0e9b2bcf3bbfaa9f2530 230 PRINTS PR01008 Flagellar L-ring protein signature 70 82 1.1E-21 T 05-07-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AC028_RS18615 f79c5a9e0a4f0e9b2bcf3bbfaa9f2530 230 PRINTS PR01008 Flagellar L-ring protein signature 190 204 1.1E-21 T 05-07-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AC028_RS18615 f79c5a9e0a4f0e9b2bcf3bbfaa9f2530 230 PRINTS PR01008 Flagellar L-ring protein signature 143 158 1.1E-21 T 05-07-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AC028_RS18615 f79c5a9e0a4f0e9b2bcf3bbfaa9f2530 230 PRINTS PR01008 Flagellar L-ring protein signature 169 185 1.1E-21 T 05-07-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AC028_RS18615 f79c5a9e0a4f0e9b2bcf3bbfaa9f2530 230 PRINTS PR01008 Flagellar L-ring protein signature 206 220 1.1E-21 T 05-07-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AC028_RS02695 20a608f5ec5cb8e1669908b6bb46e50a 149 TIGRFAM TIGR02695 azurin: azurin 24 148 2.4E-59 T 05-07-2017 IPR014068 Azurin, proteobacteria AC028_RS02695 20a608f5ec5cb8e1669908b6bb46e50a 149 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 126 142 - T 05-07-2017 IPR028871 Blue (type 1) copper protein, binding site AC028_RS02695 20a608f5ec5cb8e1669908b6bb46e50a 149 Gene3D G3DSA:2.60.40.420 23 148 3.4E-53 T 05-07-2017 IPR008972 Cupredoxin AC028_RS02695 20a608f5ec5cb8e1669908b6bb46e50a 149 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 26 149 7.0E-69 T 05-07-2017 AC028_RS02695 20a608f5ec5cb8e1669908b6bb46e50a 149 SUPERFAMILY SSF49503 23 147 1.03E-42 T 05-07-2017 IPR008972 Cupredoxin AC028_RS02695 20a608f5ec5cb8e1669908b6bb46e50a 149 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 23 147 3.6E-20 T 05-07-2017 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 AC028_RS18795 e605c2b333f9a5d1f642817fafbd12b9 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 7.3E-8 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS18795 e605c2b333f9a5d1f642817fafbd12b9 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 7.3E-8 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS18795 e605c2b333f9a5d1f642817fafbd12b9 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 1.9E-14 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS18795 e605c2b333f9a5d1f642817fafbd12b9 210 SUPERFAMILY SSF46689 8 76 1.69E-18 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS18795 e605c2b333f9a5d1f642817fafbd12b9 210 SUPERFAMILY SSF48498 83 207 1.51E-29 T 05-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AC028_RS18795 e605c2b333f9a5d1f642817fafbd12b9 210 Gene3D G3DSA:1.10.357.10 8 206 5.9E-39 T 05-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AC028_RS18795 e605c2b333f9a5d1f642817fafbd12b9 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 05-07-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AC028_RS19545 839ebb841dc0d6dceca558f4d1f5ac04 85 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 40 59 6.0E-6 T 05-07-2017 IPR019626 Stress-induced protein, KGG, repeat AC028_RS03495 d4a965b068b6d6e72bf7a4585705681b 283 Pfam PF03466 LysR substrate binding domain 89 272 2.6E-12 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS03495 d4a965b068b6d6e72bf7a4585705681b 283 SUPERFAMILY SSF46785 6 91 1.25E-20 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS03495 d4a965b068b6d6e72bf7a4585705681b 283 Gene3D G3DSA:3.40.190.10 188 234 2.6E-5 T 05-07-2017 AC028_RS03495 d4a965b068b6d6e72bf7a4585705681b 283 SUPERFAMILY SSF53850 86 270 1.52E-13 T 05-07-2017 AC028_RS03495 d4a965b068b6d6e72bf7a4585705681b 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 8.0E-7 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS03495 d4a965b068b6d6e72bf7a4585705681b 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 8.0E-7 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS03495 d4a965b068b6d6e72bf7a4585705681b 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 8.0E-7 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS03495 d4a965b068b6d6e72bf7a4585705681b 283 Gene3D G3DSA:3.40.190.10 90 187 8.1E-8 T 05-07-2017 AC028_RS03495 d4a965b068b6d6e72bf7a4585705681b 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.7E-19 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS03495 d4a965b068b6d6e72bf7a4585705681b 283 Gene3D G3DSA:1.10.10.10 5 89 1.8E-23 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS09925 032d905c6319463b587fee4c4f41ab7b 253 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 18 252 37.819 T 05-07-2017 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AC028_RS09925 032d905c6319463b587fee4c4f41ab7b 253 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 38 53 - T 05-07-2017 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AC028_RS09925 032d905c6319463b587fee4c4f41ab7b 253 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 160 174 - T 05-07-2017 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AC028_RS09925 032d905c6319463b587fee4c4f41ab7b 253 SUPERFAMILY SSF53335 22 249 4.96E-44 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS09925 032d905c6319463b587fee4c4f41ab7b 253 Gene3D G3DSA:3.40.50.150 27 248 3.3E-53 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS09925 032d905c6319463b587fee4c4f41ab7b 253 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 27 252 1.2E-80 T 05-07-2017 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AC028_RS09925 032d905c6319463b587fee4c4f41ab7b 253 Pfam PF01209 ubiE/COQ5 methyltransferase family 23 252 1.4E-89 T 05-07-2017 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AC028_RS07840 16e81465d575cd64cf64d7229d91b146 585 PIRSF PIRSF006337 7 585 1.9E-221 T 05-07-2017 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902 AC028_RS07840 16e81465d575cd64cf64d7229d91b146 585 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 12 73 2.8E-4 T 05-07-2017 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AC028_RS07840 16e81465d575cd64cf64d7229d91b146 585 Gene3D G3DSA:3.20.20.80 101 427 1.2E-75 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS07840 16e81465d575cd64cf64d7229d91b146 585 Gene3D G3DSA:3.20.20.80 468 506 1.2E-75 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS07840 16e81465d575cd64cf64d7229d91b146 585 SMART SM00642 96 453 5.8E-8 T 05-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AC028_RS07840 16e81465d575cd64cf64d7229d91b146 585 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 21 552 8.0E-216 T 05-07-2017 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902 AC028_RS07840 16e81465d575cd64cf64d7229d91b146 585 Pfam PF11941 Domain of unknown function (DUF3459) 496 574 6.3E-9 T 05-07-2017 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) AC028_RS07840 16e81465d575cd64cf64d7229d91b146 585 Gene3D G3DSA:2.60.40.10 16 93 1.2E-25 T 05-07-2017 IPR013783 Immunoglobulin-like fold AC028_RS07840 16e81465d575cd64cf64d7229d91b146 585 Pfam PF00128 Alpha amylase, catalytic domain 125 213 2.4E-12 T 05-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AC028_RS07840 16e81465d575cd64cf64d7229d91b146 585 SUPERFAMILY SSF51445 95 506 4.7E-98 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS07840 16e81465d575cd64cf64d7229d91b146 585 SUPERFAMILY SSF81296 9 93 6.82E-18 T 05-07-2017 IPR014756 Immunoglobulin E-set AC028_RS07485 31aaea8fd72e41338cbc8c54c3f8466e 1149 SUPERFAMILY SSF47384 768 850 1.47E-13 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS07485 31aaea8fd72e41338cbc8c54c3f8466e 1149 Pfam PF12860 PAS fold 643 757 2.8E-43 T 05-07-2017 AC028_RS07485 31aaea8fd72e41338cbc8c54c3f8466e 1149 SUPERFAMILY SSF55785 628 750 3.49E-11 T 05-07-2017 IPR000014 PAS domain AC028_RS07485 31aaea8fd72e41338cbc8c54c3f8466e 1149 SUPERFAMILY SSF55874 839 1002 3.14E-38 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS07485 31aaea8fd72e41338cbc8c54c3f8466e 1149 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 636 759 1.7E-7 T 05-07-2017 IPR000014 PAS domain AC028_RS07485 31aaea8fd72e41338cbc8c54c3f8466e 1149 SMART SM00388 783 849 1.4E-14 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS07485 31aaea8fd72e41338cbc8c54c3f8466e 1149 SUPERFAMILY SSF52172 1028 1144 3.98E-19 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS07485 31aaea8fd72e41338cbc8c54c3f8466e 1149 Gene3D G3DSA:3.40.50.2300 1023 1144 7.8E-20 T 05-07-2017 AC028_RS07485 31aaea8fd72e41338cbc8c54c3f8466e 1149 Gene3D G3DSA:1.10.287.130 776 845 5.5E-10 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS07485 31aaea8fd72e41338cbc8c54c3f8466e 1149 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 894 1001 7.6E-18 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS07485 31aaea8fd72e41338cbc8c54c3f8466e 1149 Pfam PF00512 His Kinase A (phospho-acceptor) domain 783 849 1.4E-11 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS07485 31aaea8fd72e41338cbc8c54c3f8466e 1149 Gene3D G3DSA:3.30.450.20 628 751 1.8E-14 T 05-07-2017 AC028_RS07485 31aaea8fd72e41338cbc8c54c3f8466e 1149 SMART SM00448 1029 1140 2.2E-14 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS07485 31aaea8fd72e41338cbc8c54c3f8466e 1149 SMART SM00387 893 1004 1.1E-25 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS07485 31aaea8fd72e41338cbc8c54c3f8466e 1149 SMART SM00091 637 705 0.0013 T 05-07-2017 IPR000014 PAS domain AC028_RS07485 31aaea8fd72e41338cbc8c54c3f8466e 1149 Gene3D G3DSA:3.30.565.10 853 1003 1.2E-36 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS07485 31aaea8fd72e41338cbc8c54c3f8466e 1149 Pfam PF00072 Response regulator receiver domain 1031 1138 2.3E-10 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS07485 31aaea8fd72e41338cbc8c54c3f8466e 1149 PRINTS PR00344 Bacterial sensor protein C-terminal signature 988 1001 7.8E-11 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS07485 31aaea8fd72e41338cbc8c54c3f8466e 1149 PRINTS PR00344 Bacterial sensor protein C-terminal signature 947 957 7.8E-11 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS07485 31aaea8fd72e41338cbc8c54c3f8466e 1149 PRINTS PR00344 Bacterial sensor protein C-terminal signature 929 943 7.8E-11 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS07485 31aaea8fd72e41338cbc8c54c3f8466e 1149 PRINTS PR00344 Bacterial sensor protein C-terminal signature 964 982 7.8E-11 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS03380 f626df034311baa3e65e32b06b6ea933 135 SUPERFAMILY SSF81273 63 105 1.73E-13 T 05-07-2017 AC028_RS03380 f626df034311baa3e65e32b06b6ea933 135 SMART SM00528 59 104 8.8E-17 T 05-07-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AC028_RS03380 f626df034311baa3e65e32b06b6ea933 135 Pfam PF00816 H-NS histone family 3 98 4.6E-21 T 05-07-2017 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AC028_RS03380 f626df034311baa3e65e32b06b6ea933 135 Gene3D G3DSA:4.10.430.10 64 105 7.2E-19 T 05-07-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AC028_RS22165 af19d5d2afffe3ab6e3f1cbecd30925f 207 SUPERFAMILY SSF46689 1 80 5.49E-21 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS22165 af19d5d2afffe3ab6e3f1cbecd30925f 207 Gene3D G3DSA:1.10.10.60 1 55 1.8E-22 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS22165 af19d5d2afffe3ab6e3f1cbecd30925f 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 4.3E-15 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS22165 af19d5d2afffe3ab6e3f1cbecd30925f 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 7.9E-9 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS22165 af19d5d2afffe3ab6e3f1cbecd30925f 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 7.9E-9 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS22165 af19d5d2afffe3ab6e3f1cbecd30925f 207 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 144 198 2.2E-18 T 05-07-2017 AC028_RS22165 af19d5d2afffe3ab6e3f1cbecd30925f 207 Gene3D G3DSA:1.10.357.10 56 202 9.5E-33 T 05-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AC028_RS16945 220552b8bda69cf936d01595f67e44e4 440 Gene3D G3DSA:3.65.10.10 26 235 3.5E-61 T 05-07-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 AC028_RS16945 220552b8bda69cf936d01595f67e44e4 440 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 18 428 2.4E-122 T 05-07-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AC028_RS16945 220552b8bda69cf936d01595f67e44e4 440 ProSitePatterns PS00885 EPSP synthase signature 2. 345 363 - T 05-07-2017 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AC028_RS16945 220552b8bda69cf936d01595f67e44e4 440 Gene3D G3DSA:3.65.10.10 236 432 1.5E-51 T 05-07-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 AC028_RS16945 220552b8bda69cf936d01595f67e44e4 440 PIRSF PIRSF000505 5 436 3.0E-119 T 05-07-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AC028_RS16945 220552b8bda69cf936d01595f67e44e4 440 ProSitePatterns PS00104 EPSP synthase signature 1. 93 107 - T 05-07-2017 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AC028_RS16945 220552b8bda69cf936d01595f67e44e4 440 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 14 433 31.952 T 05-07-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AC028_RS16945 220552b8bda69cf936d01595f67e44e4 440 SUPERFAMILY SSF55205 9 431 1.01E-124 T 05-07-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AC028_RS16945 220552b8bda69cf936d01595f67e44e4 440 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 12 423 1.1E-118 T 05-07-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 AC028_RS11090 ef29620673f639362b0bfe04a1d472c7 463 Gene3D G3DSA:3.10.50.40 285 412 4.9E-35 T 05-07-2017 AC028_RS11090 ef29620673f639362b0bfe04a1d472c7 463 Gene3D G3DSA:3.10.50.40 169 281 6.2E-27 T 05-07-2017 AC028_RS11090 ef29620673f639362b0bfe04a1d472c7 463 Hamap MF_01183 Chaperone SurA [surA]. 9 434 32.121 T 05-07-2017 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 AC028_RS11090 ef29620673f639362b0bfe04a1d472c7 463 Pfam PF13616 PPIC-type PPIASE domain 284 385 1.2E-25 T 05-07-2017 AC028_RS11090 ef29620673f639362b0bfe04a1d472c7 463 Pfam PF09312 SurA N-terminal domain 31 148 2.4E-45 T 05-07-2017 IPR015391 SurA N-terminal AC028_RS11090 ef29620673f639362b0bfe04a1d472c7 463 SUPERFAMILY SSF109998 31 203 5.73E-41 T 05-07-2017 IPR027304 Trigger factor/SurA domain AC028_RS11090 ef29620673f639362b0bfe04a1d472c7 463 SUPERFAMILY SSF54534 290 390 8.5E-28 T 05-07-2017 AC028_RS11090 ef29620673f639362b0bfe04a1d472c7 463 SUPERFAMILY SSF54534 176 281 3.4E-25 T 05-07-2017 AC028_RS11090 ef29620673f639362b0bfe04a1d472c7 463 Pfam PF00639 PPIC-type PPIASE domain 181 275 7.8E-15 T 05-07-2017 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AC028_RS05875 fa9da17db5679f680f9983b2abe6c207 157 Pfam PF07308 Protein of unknown function (DUF1456) 88 154 2.1E-24 T 05-07-2017 IPR009921 Domain of unknown function DUF1456 AC028_RS05875 fa9da17db5679f680f9983b2abe6c207 157 Pfam PF07308 Protein of unknown function (DUF1456) 3 72 7.2E-25 T 05-07-2017 IPR009921 Domain of unknown function DUF1456 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 14 1383 12.25 T 05-07-2017 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 Pfam PF04563 RNA polymerase beta subunit 28 527 2.2E-40 T 05-07-2017 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 Gene3D G3DSA:2.40.50.150 857 966 6.1E-56 T 05-07-2017 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 Gene3D G3DSA:2.40.50.150 1086 1100 6.1E-56 T 05-07-2017 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 Pfam PF04565 RNA polymerase Rpb2, domain 3 541 608 3.5E-29 T 05-07-2017 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 Pfam PF04561 RNA polymerase Rpb2, domain 2 157 227 8.2E-8 T 05-07-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 Pfam PF04561 RNA polymerase Rpb2, domain 2 362 418 5.7E-5 T 05-07-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 Pfam PF04561 RNA polymerase Rpb2, domain 2 449 482 5.1E-6 T 05-07-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 Gene3D G3DSA:3.90.1110.10 158 235 2.7E-63 T 05-07-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 Gene3D G3DSA:3.90.1110.10 352 472 2.7E-63 T 05-07-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 Gene3D G3DSA:2.40.270.10 822 849 1.3E-86 T 05-07-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 Gene3D G3DSA:2.40.270.10 1101 1284 1.3E-86 T 05-07-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 Gene3D G3DSA:2.30.150.10 620 684 1.3E-24 T 05-07-2017 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 Pfam PF04560 RNA polymerase Rpb2, domain 7 1308 1382 9.3E-27 T 05-07-2017 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 9 1381 0.0 T 05-07-2017 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1104 1116 - T 05-07-2017 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 SUPERFAMILY SSF64484 1080 1382 0.0 T 05-07-2017 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 SUPERFAMILY SSF64484 13 231 0.0 T 05-07-2017 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 SUPERFAMILY SSF64484 349 968 0.0 T 05-07-2017 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 Pfam PF10385 RNA polymerase beta subunit external 1 domain 619 684 5.9E-22 T 05-07-2017 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 Gene3D G3DSA:3.90.1100.10 21 156 8.4E-146 T 05-07-2017 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 Gene3D G3DSA:3.90.1100.10 687 741 8.4E-146 T 05-07-2017 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 Gene3D G3DSA:3.90.1100.10 473 619 8.4E-146 T 05-07-2017 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 Pfam PF00562 RNA polymerase Rpb2, domain 6 747 1306 2.3E-158 T 05-07-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11605 df5a3c43338efa27f706be651b6189a0 1383 Gene3D G3DSA:2.40.50.100 743 821 1.6E-28 T 05-07-2017 AC028_RS10050 63d4fa8d1466436c96aedb9ca6c75b3f 92 Gene3D G3DSA:3.30.70.1460 9 92 6.8E-15 T 05-07-2017 IPR027471 YbeD-like domain AC028_RS10050 63d4fa8d1466436c96aedb9ca6c75b3f 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 4 92 19.344 T 05-07-2017 IPR007454 Uncharacterised protein family UPF0250 AC028_RS10050 63d4fa8d1466436c96aedb9ca6c75b3f 92 SUPERFAMILY SSF117991 6 92 1.26E-18 T 05-07-2017 IPR027471 YbeD-like domain AC028_RS10050 63d4fa8d1466436c96aedb9ca6c75b3f 92 Pfam PF04359 Protein of unknown function (DUF493) 11 92 1.3E-20 T 05-07-2017 IPR007454 Uncharacterised protein family UPF0250 AC028_RS08970 9d2802d7db99841eff8f9a3cb09da1cc 131 Pfam PF05610 Protein of unknown function (DUF779) 23 116 1.5E-48 T 05-07-2017 IPR008497 Protein of unknown function DUF779 AC028_RS08970 9d2802d7db99841eff8f9a3cb09da1cc 131 PIRSF PIRSF009151 1 131 4.1E-66 T 05-07-2017 IPR008497 Protein of unknown function DUF779 AC028_RS17540 484d62552883d0d7dfba45c395c0b1dd 556 Pfam PF02449 Beta-galactosidase 89 232 4.2E-7 T 05-07-2017 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS17540 484d62552883d0d7dfba45c395c0b1dd 556 Gene3D G3DSA:3.20.20.80 70 379 1.7E-33 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS17540 484d62552883d0d7dfba45c395c0b1dd 556 SUPERFAMILY SSF51445 69 392 9.31E-40 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS02825 c4c84a990014fff5b6d4db582bc9627d 779 Gene3D G3DSA:2.120.10.60 492 670 1.3E-12 T 05-07-2017 AC028_RS02825 c4c84a990014fff5b6d4db582bc9627d 779 SUPERFAMILY SSF46894 2 103 1.08E-16 T 05-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AC028_RS02825 c4c84a990014fff5b6d4db582bc9627d 779 SMART SM00862 26 102 1.0E-15 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS02825 c4c84a990014fff5b6d4db582bc9627d 779 SUPERFAMILY SSF82171 219 541 1.44E-35 T 05-07-2017 AC028_RS02825 c4c84a990014fff5b6d4db582bc9627d 779 Gene3D G3DSA:2.120.10.30 219 452 1.7E-44 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS02825 c4c84a990014fff5b6d4db582bc9627d 779 Pfam PF07676 WD40-like Beta Propeller Repeat 493 528 1.0E-7 T 05-07-2017 IPR011659 WD40-like Beta Propeller AC028_RS02825 c4c84a990014fff5b6d4db582bc9627d 779 Pfam PF07676 WD40-like Beta Propeller Repeat 372 393 1.3E-4 T 05-07-2017 IPR011659 WD40-like Beta Propeller AC028_RS02825 c4c84a990014fff5b6d4db582bc9627d 779 Pfam PF07676 WD40-like Beta Propeller Repeat 267 298 3.2E-6 T 05-07-2017 IPR011659 WD40-like Beta Propeller AC028_RS02825 c4c84a990014fff5b6d4db582bc9627d 779 Pfam PF07676 WD40-like Beta Propeller Repeat 324 337 0.15 T 05-07-2017 IPR011659 WD40-like Beta Propeller AC028_RS02825 c4c84a990014fff5b6d4db582bc9627d 779 Pfam PF07676 WD40-like Beta Propeller Repeat 221 244 0.083 T 05-07-2017 IPR011659 WD40-like Beta Propeller AC028_RS02825 c4c84a990014fff5b6d4db582bc9627d 779 Gene3D G3DSA:1.10.10.10 6 104 9.6E-21 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS02825 c4c84a990014fff5b6d4db582bc9627d 779 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 102 3.8E-17 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS02825 c4c84a990014fff5b6d4db582bc9627d 779 SUPERFAMILY SSF69304 487 662 1.44E-12 T 05-07-2017 AC028_RS06495 8a6fc6cccc9450c6e313b49f7d9cea54 184 SUPERFAMILY SSF55729 8 160 2.16E-36 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS06495 8a6fc6cccc9450c6e313b49f7d9cea54 184 Pfam PF13302 Acetyltransferase (GNAT) domain 15 155 1.2E-25 T 05-07-2017 IPR000182 GNAT domain GO:0008080 AC028_RS06495 8a6fc6cccc9450c6e313b49f7d9cea54 184 Gene3D G3DSA:3.40.630.30 8 175 2.6E-44 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS12320 5973162fc479911db9f7f1591dc5e525 319 SUPERFAMILY SSF52540 7 210 2.05E-39 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12320 5973162fc479911db9f7f1591dc5e525 319 Pfam PF13177 DNA polymerase III, delta subunit 9 170 1.8E-32 T 05-07-2017 AC028_RS12320 5973162fc479911db9f7f1591dc5e525 319 Gene3D G3DSA:3.40.50.300 7 170 7.2E-40 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS08090 aad7405813ccea3c71d56c66325d568d 210 SMART SM00903 28 179 7.3E-11 T 05-07-2017 IPR002563 Flavin reductase like domain GO:0010181 AC028_RS08090 aad7405813ccea3c71d56c66325d568d 210 SUPERFAMILY SSF50475 7 194 3.73E-48 T 05-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 AC028_RS08090 aad7405813ccea3c71d56c66325d568d 210 Gene3D G3DSA:2.30.110.10 17 191 5.9E-63 T 05-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 AC028_RS08090 aad7405813ccea3c71d56c66325d568d 210 Pfam PF01613 Flavin reductase like domain 30 174 3.1E-14 T 05-07-2017 IPR002563 Flavin reductase like domain GO:0010181 AC028_RS18630 8c1cd5700a0a7226d400231da5fc33af 251 Pfam PF00460 Flagella basal body rod protein 5 35 1.4E-8 T 05-07-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AC028_RS18630 8c1cd5700a0a7226d400231da5fc33af 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 121 9.4E-36 T 05-07-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AC028_RS18630 8c1cd5700a0a7226d400231da5fc33af 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 246 5.4E-22 T 05-07-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AC028_RS18630 8c1cd5700a0a7226d400231da5fc33af 251 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 227 3.7E-55 T 05-07-2017 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 AC028_RS18630 8c1cd5700a0a7226d400231da5fc33af 251 SUPERFAMILY SSF117143 77 208 1.44E-14 T 05-07-2017 AC028_RS00230 77ed78546c645d7c2e04c5223311555a 188 Pfam PF02622 Uncharacterized ACR, COG1678 17 175 1.5E-47 T 05-07-2017 IPR003774 Protein of unknown function UPF0301 AC028_RS00230 77ed78546c645d7c2e04c5223311555a 188 Gene3D G3DSA:3.40.1740.10 6 45 1.6E-29 T 05-07-2017 AC028_RS00230 77ed78546c645d7c2e04c5223311555a 188 Gene3D G3DSA:3.40.1740.10 132 178 1.6E-29 T 05-07-2017 AC028_RS00230 77ed78546c645d7c2e04c5223311555a 188 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 6 188 37.11 T 05-07-2017 IPR003774 Protein of unknown function UPF0301 AC028_RS00230 77ed78546c645d7c2e04c5223311555a 188 Gene3D G3DSA:3.30.70.1300 46 131 2.9E-28 T 05-07-2017 AC028_RS00230 77ed78546c645d7c2e04c5223311555a 188 SUPERFAMILY SSF143456 6 188 1.01E-61 T 05-07-2017 AC028_RS08950 ec6573bc2bf98d1050edeb1f8eed9df8 388 Pfam PF01070 FMN-dependent dehydrogenase 13 376 1.4E-126 T 05-07-2017 IPR000262 FMN-dependent dehydrogenase GO:0016491 AC028_RS08950 ec6573bc2bf98d1050edeb1f8eed9df8 388 SUPERFAMILY SSF51395 223 373 2.2E-98 T 05-07-2017 AC028_RS08950 ec6573bc2bf98d1050edeb1f8eed9df8 388 SUPERFAMILY SSF51395 6 193 2.2E-98 T 05-07-2017 AC028_RS08950 ec6573bc2bf98d1050edeb1f8eed9df8 388 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 05-07-2017 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 AC028_RS08950 ec6573bc2bf98d1050edeb1f8eed9df8 388 PIRSF PIRSF000138 2 380 8.0E-123 T 05-07-2017 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 AC028_RS08950 ec6573bc2bf98d1050edeb1f8eed9df8 388 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 74.771 T 05-07-2017 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 AC028_RS08950 ec6573bc2bf98d1050edeb1f8eed9df8 388 Gene3D G3DSA:3.20.20.70 6 377 6.5E-135 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS03015 44a07055854f01047bdbf5aef8e759af 426 Gene3D G3DSA:2.30.40.10 303 398 2.7E-17 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS03015 44a07055854f01047bdbf5aef8e759af 426 SUPERFAMILY SSF51556 287 376 2.27E-5 T 05-07-2017 IPR032466 Metal-dependent hydrolase AC028_RS03015 44a07055854f01047bdbf5aef8e759af 426 Gene3D G3DSA:2.30.40.10 22 137 2.5E-17 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS03015 44a07055854f01047bdbf5aef8e759af 426 SUPERFAMILY SSF51338 366 400 1.94E-20 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS03015 44a07055854f01047bdbf5aef8e759af 426 SUPERFAMILY SSF51338 30 85 1.94E-20 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS03015 44a07055854f01047bdbf5aef8e759af 426 Pfam PF01979 Amidohydrolase family 282 383 7.1E-10 T 05-07-2017 IPR006680 Amidohydrolase-related GO:0016787 AC028_RS03585 bf41505ebea9f6665353f17e3589bca3 456 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 37 256 1.2E-52 T 05-07-2017 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 AC028_RS03585 bf41505ebea9f6665353f17e3589bca3 456 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 1 305 8.7E-66 T 05-07-2017 IPR014150 Conjugal transfer, TrbL AC028_RS18930 637dd6063dfed3eb7dc7d78e058041f8 155 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 36 90 3.8E-12 T 05-07-2017 IPR022687 DTXR-type HTH domain GO:0003677 AC028_RS18930 637dd6063dfed3eb7dc7d78e058041f8 155 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 93 148 4.8E-13 T 05-07-2017 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 AC028_RS18930 637dd6063dfed3eb7dc7d78e058041f8 155 Gene3D G3DSA:1.10.10.10 34 100 6.6E-28 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS18930 637dd6063dfed3eb7dc7d78e058041f8 155 SMART SM00529 54 152 1.8E-31 T 05-07-2017 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 AC028_RS18930 637dd6063dfed3eb7dc7d78e058041f8 155 Gene3D G3DSA:1.10.60.10 105 148 6.6E-19 T 05-07-2017 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 AC028_RS18930 637dd6063dfed3eb7dc7d78e058041f8 155 SUPERFAMILY SSF46785 47 121 2.53E-14 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS00685 4371bc4193592980ef17a14722ecce4a 1048 Pfam PF00593 TonB dependent receptor 689 1046 2.0E-33 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS00685 4371bc4193592980ef17a14722ecce4a 1048 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 182 1.4E-14 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS00685 4371bc4193592980ef17a14722ecce4a 1048 Gene3D G3DSA:2.170.130.10 65 186 8.9E-19 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS00685 4371bc4193592980ef17a14722ecce4a 1048 SUPERFAMILY SSF56935 299 435 9.36E-85 T 05-07-2017 AC028_RS00685 4371bc4193592980ef17a14722ecce4a 1048 SUPERFAMILY SSF56935 578 788 9.36E-85 T 05-07-2017 AC028_RS00685 4371bc4193592980ef17a14722ecce4a 1048 SUPERFAMILY SSF56935 34 252 9.36E-85 T 05-07-2017 AC028_RS00685 4371bc4193592980ef17a14722ecce4a 1048 SUPERFAMILY SSF56935 478 537 9.36E-85 T 05-07-2017 AC028_RS00685 4371bc4193592980ef17a14722ecce4a 1048 SUPERFAMILY SSF56935 885 1048 9.36E-85 T 05-07-2017 AC028_RS00685 4371bc4193592980ef17a14722ecce4a 1048 Gene3D G3DSA:2.40.170.20 298 342 5.0E-56 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS00685 4371bc4193592980ef17a14722ecce4a 1048 Gene3D G3DSA:2.40.170.20 379 441 5.0E-56 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS00685 4371bc4193592980ef17a14722ecce4a 1048 Gene3D G3DSA:2.40.170.20 879 1048 5.0E-56 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS00685 4371bc4193592980ef17a14722ecce4a 1048 Gene3D G3DSA:2.40.170.20 498 532 5.0E-56 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS00685 4371bc4193592980ef17a14722ecce4a 1048 Gene3D G3DSA:2.40.170.20 187 264 5.0E-56 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS00685 4371bc4193592980ef17a14722ecce4a 1048 Gene3D G3DSA:2.40.170.20 682 806 5.0E-56 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS00685 4371bc4193592980ef17a14722ecce4a 1048 Gene3D G3DSA:2.40.170.20 595 646 5.0E-56 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS00685 4371bc4193592980ef17a14722ecce4a 1048 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 45 1048 4.3E-271 T 05-07-2017 IPR010104 Bacterial TonB-dependent receptor AC028_RS01535 acca5e3ea296586078dce3c80e2834b7 795 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 44 - T 05-07-2017 IPR010916 TonB box, conserved site AC028_RS01535 acca5e3ea296586078dce3c80e2834b7 795 Gene3D G3DSA:2.170.130.10 51 174 1.6E-31 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS01535 acca5e3ea296586078dce3c80e2834b7 795 Gene3D G3DSA:2.40.170.20 175 795 1.2E-95 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01535 acca5e3ea296586078dce3c80e2834b7 795 SUPERFAMILY SSF56935 37 791 1.1E-109 T 05-07-2017 AC028_RS01535 acca5e3ea296586078dce3c80e2834b7 795 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 172 5.6E-21 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS01535 acca5e3ea296586078dce3c80e2834b7 795 Pfam PF00593 TonB dependent receptor 485 793 2.9E-28 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01665 a231c0708b1c05ac0082d3985b4ed636 203 PIRSF PIRSF015617 6 203 1.6E-65 T 05-07-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AC028_RS01665 a231c0708b1c05ac0082d3985b4ed636 203 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 33 202 7.3E-55 T 05-07-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AC028_RS01665 a231c0708b1c05ac0082d3985b4ed636 203 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 32 202 2.5E-64 T 05-07-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AC028_RS01665 a231c0708b1c05ac0082d3985b4ed636 203 Gene3D G3DSA:3.40.50.300 8 202 1.9E-68 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01665 a231c0708b1c05ac0082d3985b4ed636 203 SUPERFAMILY SSF52540 12 202 3.4E-66 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS03195 a70afd882bea98666538f96123b38c89 138 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 25 1.2E-7 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS03195 a70afd882bea98666538f96123b38c89 138 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS03195 a70afd882bea98666538f96123b38c89 138 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 2.7E-5 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS21840 8ea28cb3eec5e52fcf23a764e51e1962 994 Pfam PF00593 TonB dependent receptor 637 993 3.7E-28 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21840 8ea28cb3eec5e52fcf23a764e51e1962 994 Gene3D G3DSA:2.170.130.10 59 173 3.5E-35 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS21840 8ea28cb3eec5e52fcf23a764e51e1962 994 Gene3D G3DSA:2.40.170.20 174 262 4.2E-86 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21840 8ea28cb3eec5e52fcf23a764e51e1962 994 Gene3D G3DSA:2.40.170.20 714 994 4.2E-86 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21840 8ea28cb3eec5e52fcf23a764e51e1962 994 Gene3D G3DSA:2.40.170.20 335 474 4.2E-86 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21840 8ea28cb3eec5e52fcf23a764e51e1962 994 Gene3D G3DSA:2.40.170.20 533 669 4.2E-86 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21840 8ea28cb3eec5e52fcf23a764e51e1962 994 SUPERFAMILY SSF56935 403 455 8.79E-99 T 05-07-2017 AC028_RS21840 8ea28cb3eec5e52fcf23a764e51e1962 994 SUPERFAMILY SSF56935 524 668 8.79E-99 T 05-07-2017 AC028_RS21840 8ea28cb3eec5e52fcf23a764e51e1962 994 SUPERFAMILY SSF56935 45 231 8.79E-99 T 05-07-2017 AC028_RS21840 8ea28cb3eec5e52fcf23a764e51e1962 994 SUPERFAMILY SSF56935 725 770 8.79E-99 T 05-07-2017 AC028_RS21840 8ea28cb3eec5e52fcf23a764e51e1962 994 SUPERFAMILY SSF56935 817 994 8.79E-99 T 05-07-2017 AC028_RS21840 8ea28cb3eec5e52fcf23a764e51e1962 994 SUPERFAMILY SSF56935 334 374 8.79E-99 T 05-07-2017 AC028_RS21840 8ea28cb3eec5e52fcf23a764e51e1962 994 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 171 4.7E-23 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS21840 8ea28cb3eec5e52fcf23a764e51e1962 994 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 977 994 - T 05-07-2017 IPR010917 TonB-dependent receptor, conserved site AC028_RS07180 8a66ef9bc67d2c6b57fa8d52039d65cc 352 SUPERFAMILY SSF51735 151 313 3.47E-43 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS07180 8a66ef9bc67d2c6b57fa8d52039d65cc 352 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 179 207 - T 05-07-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AC028_RS07180 8a66ef9bc67d2c6b57fa8d52039d65cc 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 144 8.4E-27 T 05-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AC028_RS07180 8a66ef9bc67d2c6b57fa8d52039d65cc 352 Gene3D G3DSA:3.90.180.10 2 181 3.8E-62 T 05-07-2017 IPR011032 GroES-like AC028_RS07180 8a66ef9bc67d2c6b57fa8d52039d65cc 352 SUPERFAMILY SSF50129 9 172 2.43E-47 T 05-07-2017 IPR011032 GroES-like AC028_RS07180 8a66ef9bc67d2c6b57fa8d52039d65cc 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 05-07-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AC028_RS07180 8a66ef9bc67d2c6b57fa8d52039d65cc 352 Pfam PF00107 Zinc-binding dehydrogenase 186 309 1.1E-24 T 05-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AC028_RS07180 8a66ef9bc67d2c6b57fa8d52039d65cc 352 Gene3D G3DSA:3.40.50.720 182 293 3.2E-25 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS07180 8a66ef9bc67d2c6b57fa8d52039d65cc 352 SMART SM00829 11 343 1.6E-5 T 05-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AC028_RS02910 ef686b37a8789ac92165c59c1a6f2d6e 218 Gene3D G3DSA:3.40.50.150 4 210 2.6E-48 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS02910 ef686b37a8789ac92165c59c1a6f2d6e 218 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 9 174 3.2E-32 T 05-07-2017 AC028_RS02910 ef686b37a8789ac92165c59c1a6f2d6e 218 SUPERFAMILY SSF53335 3 180 4.14E-43 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS17930 7d5a4e13e31b4d38fe9adbb9ecd14857 82 SUPERFAMILY SSF50037 3 76 1.08E-13 T 05-07-2017 IPR008988 Transcriptional repressor, C-terminal AC028_RS17930 7d5a4e13e31b4d38fe9adbb9ecd14857 82 Pfam PF04023 FeoA domain 1 76 3.3E-18 T 05-07-2017 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AC028_RS17930 7d5a4e13e31b4d38fe9adbb9ecd14857 82 SMART SM00899 1 77 1.3E-17 T 05-07-2017 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AC028_RS11595 e3e9434aeac5b7283dc4044fbdce760b 177 SUPERFAMILY SSF160369 4 160 4.97E-43 T 05-07-2017 AC028_RS11595 e3e9434aeac5b7283dc4044fbdce760b 177 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 25.124 T 05-07-2017 IPR022973 Ribosomal protein L10 AC028_RS11595 e3e9434aeac5b7283dc4044fbdce760b 177 Pfam PF00466 Ribosomal protein L10 6 101 1.3E-22 T 05-07-2017 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AC028_RS10310 2d89d8338c45db2f5c911bf4f81affd1 556 Gene3D G3DSA:3.50.50.60 472 535 7.2E-118 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS10310 2d89d8338c45db2f5c911bf4f81affd1 556 Gene3D G3DSA:3.50.50.60 192 320 7.2E-118 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS10310 2d89d8338c45db2f5c911bf4f81affd1 556 Gene3D G3DSA:3.50.50.60 2 129 7.2E-118 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS10310 2d89d8338c45db2f5c911bf4f81affd1 556 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 84 107 - T 05-07-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AC028_RS10310 2d89d8338c45db2f5c911bf4f81affd1 556 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 556 60.389 T 05-07-2017 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AC028_RS10310 2d89d8338c45db2f5c911bf4f81affd1 556 SUPERFAMILY SSF54373 297 479 3.83E-61 T 05-07-2017 AC028_RS10310 2d89d8338c45db2f5c911bf4f81affd1 556 SUPERFAMILY SSF51905 478 538 1.58E-85 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS10310 2d89d8338c45db2f5c911bf4f81affd1 556 SUPERFAMILY SSF51905 1 295 1.58E-85 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS10310 2d89d8338c45db2f5c911bf4f81affd1 556 Pfam PF00732 GMC oxidoreductase 5 302 3.0E-96 T 05-07-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AC028_RS10310 2d89d8338c45db2f5c911bf4f81affd1 556 Pfam PF05199 GMC oxidoreductase 395 529 2.4E-40 T 05-07-2017 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AC028_RS10310 2d89d8338c45db2f5c911bf4f81affd1 556 PIRSF PIRSF000137 1 539 6.8E-134 T 05-07-2017 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 AC028_RS10310 2d89d8338c45db2f5c911bf4f81affd1 556 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 261 275 - T 05-07-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AC028_RS10310 2d89d8338c45db2f5c911bf4f81affd1 556 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 539 8.8E-272 T 05-07-2017 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AC028_RS19475 c624dc755ddc9d5eabd6d18bfedb321c 454 SUPERFAMILY SSF53474 3 249 2.37E-36 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS19475 c624dc755ddc9d5eabd6d18bfedb321c 454 Pfam PF12697 Alpha/beta hydrolase family 6 241 2.1E-18 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS19475 c624dc755ddc9d5eabd6d18bfedb321c 454 Gene3D G3DSA:3.40.50.1820 3 249 4.2E-38 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS04470 615bc1d39c77c83b2525182586e8801c 293 SUPERFAMILY SSF82171 36 222 3.92E-19 T 05-07-2017 AC028_RS04470 615bc1d39c77c83b2525182586e8801c 293 Gene3D G3DSA:2.120.10.30 35 225 7.8E-22 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS04470 615bc1d39c77c83b2525182586e8801c 293 Pfam PF07676 WD40-like Beta Propeller Repeat 137 174 1.3E-6 T 05-07-2017 IPR011659 WD40-like Beta Propeller AC028_RS04470 615bc1d39c77c83b2525182586e8801c 293 Pfam PF07676 WD40-like Beta Propeller Repeat 33 69 1.7E-9 T 05-07-2017 IPR011659 WD40-like Beta Propeller AC028_RS04470 615bc1d39c77c83b2525182586e8801c 293 Pfam PF07676 WD40-like Beta Propeller Repeat 83 120 5.0E-11 T 05-07-2017 IPR011659 WD40-like Beta Propeller AC028_RS10380 eb7e1ce506a23b14dac92a30769a798e 239 SMART SM00862 157 232 9.9E-22 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS10380 eb7e1ce506a23b14dac92a30769a798e 239 SUPERFAMILY SSF46894 131 233 7.65E-25 T 05-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AC028_RS10380 eb7e1ce506a23b14dac92a30769a798e 239 Gene3D G3DSA:1.10.10.10 135 234 4.3E-25 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS10380 eb7e1ce506a23b14dac92a30769a798e 239 SMART SM00448 6 117 3.4E-39 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS10380 eb7e1ce506a23b14dac92a30769a798e 239 Gene3D G3DSA:3.40.50.2300 5 134 3.5E-41 T 05-07-2017 AC028_RS10380 eb7e1ce506a23b14dac92a30769a798e 239 SUPERFAMILY SSF52172 3 137 1.12E-40 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS10380 eb7e1ce506a23b14dac92a30769a798e 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 232 3.0E-22 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS10380 eb7e1ce506a23b14dac92a30769a798e 239 Pfam PF00072 Response regulator receiver domain 8 118 4.6E-28 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS02805 f11dae5b31eb3dc628c4acdd26e038aa 178 SUPERFAMILY SSF50324 7 174 1.44E-66 T 05-07-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 AC028_RS02805 f11dae5b31eb3dc628c4acdd26e038aa 178 Gene3D G3DSA:3.90.80.10 7 174 3.1E-61 T 05-07-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 AC028_RS02805 f11dae5b31eb3dc628c4acdd26e038aa 178 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.444 T 05-07-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 AC028_RS02805 f11dae5b31eb3dc628c4acdd26e038aa 178 Pfam PF00719 Inorganic pyrophosphatase 18 174 3.4E-52 T 05-07-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 AC028_RS14665 203bf66d57e0743d8e4da709befcaf51 237 Pfam PF00849 RNA pseudouridylate synthase 61 137 1.8E-9 T 05-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS14665 203bf66d57e0743d8e4da709befcaf51 237 Gene3D G3DSA:3.10.290.10 1 53 3.9E-4 T 05-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AC028_RS14665 203bf66d57e0743d8e4da709befcaf51 237 SUPERFAMILY SSF55120 61 225 4.8E-36 T 05-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS14665 203bf66d57e0743d8e4da709befcaf51 237 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 64 223 1.1E-40 T 05-07-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AC028_RS20955 a0995463bab3ae6dd904f48a350ebc4b 634 PRINTS PR00775 90kDa heat shock protein signature 29 51 1.4E-58 T 05-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal AC028_RS20955 a0995463bab3ae6dd904f48a350ebc4b 634 PRINTS PR00775 90kDa heat shock protein signature 78 95 1.4E-58 T 05-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal AC028_RS20955 a0995463bab3ae6dd904f48a350ebc4b 634 PRINTS PR00775 90kDa heat shock protein signature 123 145 1.4E-58 T 05-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal AC028_RS20955 a0995463bab3ae6dd904f48a350ebc4b 634 PRINTS PR00775 90kDa heat shock protein signature 193 211 1.4E-58 T 05-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal AC028_RS20955 a0995463bab3ae6dd904f48a350ebc4b 634 PRINTS PR00775 90kDa heat shock protein signature 8 28 1.4E-58 T 05-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal AC028_RS20955 a0995463bab3ae6dd904f48a350ebc4b 634 PRINTS PR00775 90kDa heat shock protein signature 96 113 1.4E-58 T 05-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal AC028_RS20955 a0995463bab3ae6dd904f48a350ebc4b 634 PRINTS PR00775 90kDa heat shock protein signature 175 192 1.4E-58 T 05-07-2017 IPR020575 Heat shock protein Hsp90, N-terminal AC028_RS20955 a0995463bab3ae6dd904f48a350ebc4b 634 SUPERFAMILY SSF54211 236 491 3.41E-94 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS20955 a0995463bab3ae6dd904f48a350ebc4b 634 Gene3D G3DSA:3.30.565.10 9 243 4.3E-80 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS20955 a0995463bab3ae6dd904f48a350ebc4b 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 630 31.935 T 05-07-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AC028_RS20955 a0995463bab3ae6dd904f48a350ebc4b 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 185 3.6E-14 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS20955 a0995463bab3ae6dd904f48a350ebc4b 634 SUPERFAMILY SSF55874 8 218 9.17E-65 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS20955 a0995463bab3ae6dd904f48a350ebc4b 634 SMART SM00387 30 187 7.2E-11 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS20955 a0995463bab3ae6dd904f48a350ebc4b 634 SUPERFAMILY SSF110942 518 630 5.62E-33 T 05-07-2017 AC028_RS20955 a0995463bab3ae6dd904f48a350ebc4b 634 PIRSF PIRSF002583 2 634 7.1E-207 T 05-07-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AC028_RS20955 a0995463bab3ae6dd904f48a350ebc4b 634 Pfam PF00183 Hsp90 protein 228 629 4.3E-126 T 05-07-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AC028_RS20955 a0995463bab3ae6dd904f48a350ebc4b 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 05-07-2017 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 AC028_RS08515 3b3b18b737156522c587e58d627b66fc 128 Gene3D G3DSA:1.10.10.10 4 78 2.4E-16 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS08515 3b3b18b737156522c587e58d627b66fc 128 Pfam PF03965 Penicillinase repressor 6 119 1.2E-27 T 05-07-2017 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 AC028_RS08515 3b3b18b737156522c587e58d627b66fc 128 SUPERFAMILY SSF46785 4 121 9.36E-24 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS08515 3b3b18b737156522c587e58d627b66fc 128 PIRSF PIRSF019455 1 128 1.7E-24 T 05-07-2017 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 AC028_RS03360 349da639c6fb01364413c82956b5e401 257 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 05-07-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AC028_RS03360 349da639c6fb01364413c82956b5e401 257 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 23 192 8.2E-34 T 05-07-2017 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 AC028_RS03360 349da639c6fb01364413c82956b5e401 257 Pfam PF01066 CDP-alcohol phosphatidyltransferase 16 79 7.6E-15 T 05-07-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AC028_RS07495 795859f31d670015e74e80df0ee75d0d 249 SUPERFAMILY SSF55781 74 248 1.57E-30 T 05-07-2017 IPR029016 GAF domain-like AC028_RS07495 795859f31d670015e74e80df0ee75d0d 249 Gene3D G3DSA:3.30.450.40 78 241 6.2E-31 T 05-07-2017 IPR029016 GAF domain-like AC028_RS07495 795859f31d670015e74e80df0ee75d0d 249 SMART SM00346 10 99 2.4E-19 T 05-07-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AC028_RS07495 795859f31d670015e74e80df0ee75d0d 249 Pfam PF09339 IclR helix-turn-helix domain 12 63 4.1E-15 T 05-07-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AC028_RS07495 795859f31d670015e74e80df0ee75d0d 249 SUPERFAMILY SSF46785 12 79 8.49E-16 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS07495 795859f31d670015e74e80df0ee75d0d 249 Pfam PF01614 Bacterial transcriptional regulator 131 245 3.1E-8 T 05-07-2017 IPR014757 Transcription regulator IclR, C-terminal AC028_RS07495 795859f31d670015e74e80df0ee75d0d 249 Gene3D G3DSA:1.10.10.10 8 77 4.0E-21 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS07045 64a04ed7264331c57cd12a7b09168c7a 397 SUPERFAMILY SSF48452 320 382 2.28E-17 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS07045 64a04ed7264331c57cd12a7b09168c7a 397 SUPERFAMILY SSF48452 179 281 2.28E-17 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS07045 64a04ed7264331c57cd12a7b09168c7a 397 Pfam PF09295 ChAPs (Chs5p-Arf1p-binding proteins) 145 251 7.4E-5 T 05-07-2017 IPR015374 Chs5p-Arf1p binding AC028_RS07045 64a04ed7264331c57cd12a7b09168c7a 397 Gene3D G3DSA:1.25.40.10 174 391 2.4E-24 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS07045 64a04ed7264331c57cd12a7b09168c7a 397 SUPERFAMILY SSF48452 102 220 1.63E-10 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS07045 64a04ed7264331c57cd12a7b09168c7a 397 SMART SM00028 354 386 140.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS07045 64a04ed7264331c57cd12a7b09168c7a 397 SMART SM00028 320 353 14.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS07045 64a04ed7264331c57cd12a7b09168c7a 397 SMART SM00028 179 212 0.073 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS07045 64a04ed7264331c57cd12a7b09168c7a 397 SMART SM00028 106 139 150.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS19430 959760c69fec93f7fce2be7891e920f0 299 SUPERFAMILY SSF46785 2 112 2.56E-22 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS19430 959760c69fec93f7fce2be7891e920f0 299 SUPERFAMILY SSF53850 92 297 1.71E-40 T 05-07-2017 AC028_RS19430 959760c69fec93f7fce2be7891e920f0 299 Pfam PF03466 LysR substrate binding domain 91 293 2.2E-41 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS19430 959760c69fec93f7fce2be7891e920f0 299 Gene3D G3DSA:3.40.190.10 177 260 6.1E-22 T 05-07-2017 AC028_RS19430 959760c69fec93f7fce2be7891e920f0 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.3E-19 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS19430 959760c69fec93f7fce2be7891e920f0 299 Gene3D G3DSA:3.40.190.10 92 176 9.4E-5 T 05-07-2017 AC028_RS19430 959760c69fec93f7fce2be7891e920f0 299 Gene3D G3DSA:1.10.10.10 1 86 1.2E-25 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS13005 98aa998fff26a10a67eb2917d05eda2a 340 Pfam PF01687 Riboflavin kinase 185 306 1.2E-35 T 05-07-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AC028_RS13005 98aa998fff26a10a67eb2917d05eda2a 340 Gene3D G3DSA:2.40.30.30 182 317 1.5E-38 T 05-07-2017 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 AC028_RS13005 98aa998fff26a10a67eb2917d05eda2a 340 Gene3D G3DSA:3.40.50.620 15 181 1.3E-51 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS13005 98aa998fff26a10a67eb2917d05eda2a 340 SMART SM00904 184 307 1.9E-59 T 05-07-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AC028_RS13005 98aa998fff26a10a67eb2917d05eda2a 340 SUPERFAMILY SSF82114 176 308 1.33E-42 T 05-07-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AC028_RS13005 98aa998fff26a10a67eb2917d05eda2a 340 PIRSF PIRSF004491 7 314 2.4E-89 T 05-07-2017 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AC028_RS13005 98aa998fff26a10a67eb2917d05eda2a 340 SUPERFAMILY SSF52374 17 176 1.24E-27 T 05-07-2017 AC028_RS13005 98aa998fff26a10a67eb2917d05eda2a 340 Pfam PF06574 FAD synthetase 15 168 4.0E-43 T 05-07-2017 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AC028_RS13005 98aa998fff26a10a67eb2917d05eda2a 340 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 306 3.3E-74 T 05-07-2017 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AC028_RS19170 5a5d1eed802b9e876785498331edd983 848 SMART SM00849 548 733 1.0E-11 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS19170 5a5d1eed802b9e876785498331edd983 848 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 266 442 1.5E-25 T 05-07-2017 IPR004477 ComEC/Rec2-related protein AC028_RS19170 5a5d1eed802b9e876785498331edd983 848 Pfam PF03772 Competence protein 244 512 9.1E-59 T 05-07-2017 IPR004477 ComEC/Rec2-related protein AC028_RS19170 5a5d1eed802b9e876785498331edd983 848 Pfam PF00753 Metallo-beta-lactamase superfamily 545 702 1.5E-11 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS19170 5a5d1eed802b9e876785498331edd983 848 Pfam PF13567 Domain of unknown function (DUF4131) 30 206 1.1E-23 T 05-07-2017 IPR025405 Domain of unknown function DUF4131 AC028_RS19170 5a5d1eed802b9e876785498331edd983 848 Gene3D G3DSA:3.60.15.10 538 750 4.7E-29 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS19170 5a5d1eed802b9e876785498331edd983 848 SUPERFAMILY SSF56281 538 768 1.01E-43 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS19170 5a5d1eed802b9e876785498331edd983 848 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 161 762 1.3E-99 T 05-07-2017 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 AC028_RS13110 fb685cab6bf402407a01f6c4f861f1e9 120 SUPERFAMILY SSF52091 2 113 6.67E-16 T 05-07-2017 IPR002645 STAS domain AC028_RS13110 fb685cab6bf402407a01f6c4f861f1e9 120 Gene3D G3DSA:3.30.750.24 4 96 2.2E-10 T 05-07-2017 IPR002645 STAS domain AC028_RS01260 00598c7db5400a6f65655bf22f96ae3f 250 Pfam PF03070 TENA/THI-4/PQQC family 12 222 1.5E-59 T 05-07-2017 IPR004305 Thiaminase-2/PQQC AC028_RS01260 00598c7db5400a6f65655bf22f96ae3f 250 SUPERFAMILY SSF48613 3 231 1.01E-61 T 05-07-2017 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AC028_RS01260 00598c7db5400a6f65655bf22f96ae3f 250 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 250 118.136 T 05-07-2017 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 AC028_RS01260 00598c7db5400a6f65655bf22f96ae3f 250 Gene3D G3DSA:1.20.910.10 3 241 1.4E-100 T 05-07-2017 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AC028_RS01260 00598c7db5400a6f65655bf22f96ae3f 250 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 5 242 6.6E-128 T 05-07-2017 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 AC028_RS05765 8030874ab4891cf746faf0e237672f1b 172 SUPERFAMILY SSF46626 59 169 1.58E-16 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS05765 8030874ab4891cf746faf0e237672f1b 172 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 90 167 8.7E-12 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS05765 8030874ab4891cf746faf0e237672f1b 172 Gene3D G3DSA:1.10.760.10 89 169 6.0E-24 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS05915 b26f652076fe4a2a8f268195cb386e79 310 Gene3D G3DSA:1.10.10.10 12 94 2.5E-21 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS05915 b26f652076fe4a2a8f268195cb386e79 310 Gene3D G3DSA:3.40.190.10 100 185 3.0E-19 T 05-07-2017 AC028_RS05915 b26f652076fe4a2a8f268195cb386e79 310 SUPERFAMILY SSF46785 7 119 1.2E-18 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS05915 b26f652076fe4a2a8f268195cb386e79 310 Pfam PF03466 LysR substrate binding domain 97 300 3.9E-36 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS05915 b26f652076fe4a2a8f268195cb386e79 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 9.2E-16 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS05915 b26f652076fe4a2a8f268195cb386e79 310 Gene3D G3DSA:3.40.190.10 186 266 4.4E-8 T 05-07-2017 AC028_RS05915 b26f652076fe4a2a8f268195cb386e79 310 SUPERFAMILY SSF53850 98 302 1.28E-38 T 05-07-2017 AC028_RS04040 959d7dda36f9e9d0f2af9cc4dd8b52b9 92 Pfam PF04380 Membrane fusogenic activity 2 78 7.1E-27 T 05-07-2017 IPR007475 Membrane fusogenic activity AC028_RS18185 00607de7b1a2f142f2e573b59d2d2bb7 911 Gene3D G3DSA:1.10.287.950 621 825 2.3E-62 T 05-07-2017 AC028_RS18185 00607de7b1a2f142f2e573b59d2d2bb7 911 SMART SM00304 327 379 6.4E-10 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18185 00607de7b1a2f142f2e573b59d2d2bb7 911 SMART SM00304 553 605 3.8 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18185 00607de7b1a2f142f2e573b59d2d2bb7 911 Gene3D G3DSA:3.30.450.20 164 305 2.2E-15 T 05-07-2017 AC028_RS18185 00607de7b1a2f142f2e573b59d2d2bb7 911 Pfam PF00672 HAMP domain 308 375 2.5E-12 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18185 00607de7b1a2f142f2e573b59d2d2bb7 911 SUPERFAMILY SSF58104 573 854 1.05E-71 T 05-07-2017 AC028_RS18185 00607de7b1a2f142f2e573b59d2d2bb7 911 SUPERFAMILY SSF158472 327 378 5.75E-10 T 05-07-2017 AC028_RS18185 00607de7b1a2f142f2e573b59d2d2bb7 911 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 733 762 5.6E-58 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18185 00607de7b1a2f142f2e573b59d2d2bb7 911 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 627 656 5.6E-58 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18185 00607de7b1a2f142f2e573b59d2d2bb7 911 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 704 731 5.6E-58 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18185 00607de7b1a2f142f2e573b59d2d2bb7 911 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 781 810 5.6E-58 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18185 00607de7b1a2f142f2e573b59d2d2bb7 911 SMART SM00283 606 853 1.3E-92 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18185 00607de7b1a2f142f2e573b59d2d2bb7 911 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 658 852 4.9E-63 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18185 00607de7b1a2f142f2e573b59d2d2bb7 911 Pfam PF02743 Cache domain 26 261 7.7E-15 T 05-07-2017 IPR033479 Double Cache domain 1 AC028_RS18185 00607de7b1a2f142f2e573b59d2d2bb7 911 Gene3D G3DSA:3.30.450.20 386 507 4.9E-5 T 05-07-2017 AC028_RS04100 942cd76aaf16b601d79a9eb3e7de7a9a 374 SMART SM00244 142 301 7.9E-17 T 05-07-2017 IPR001107 Band 7 domain AC028_RS04100 942cd76aaf16b601d79a9eb3e7de7a9a 374 Pfam PF01145 SPFH domain / Band 7 family 147 318 6.7E-25 T 05-07-2017 IPR001107 Band 7 domain AC028_RS04100 942cd76aaf16b601d79a9eb3e7de7a9a 374 SUPERFAMILY SSF117892 182 307 4.32E-25 T 05-07-2017 IPR001107 Band 7 domain AC028_RS04100 942cd76aaf16b601d79a9eb3e7de7a9a 374 PRINTS PR00721 Stomatin signature 198 219 4.0E-15 T 05-07-2017 IPR001972 Stomatin family GO:0016020 AC028_RS04100 942cd76aaf16b601d79a9eb3e7de7a9a 374 PRINTS PR00721 Stomatin signature 149 171 4.0E-15 T 05-07-2017 IPR001972 Stomatin family GO:0016020 AC028_RS04100 942cd76aaf16b601d79a9eb3e7de7a9a 374 PRINTS PR00721 Stomatin signature 277 295 4.0E-15 T 05-07-2017 IPR001972 Stomatin family GO:0016020 AC028_RS04100 942cd76aaf16b601d79a9eb3e7de7a9a 374 PRINTS PR00721 Stomatin signature 296 317 4.0E-15 T 05-07-2017 IPR001972 Stomatin family GO:0016020 AC028_RS04100 942cd76aaf16b601d79a9eb3e7de7a9a 374 PRINTS PR00721 Stomatin signature 321 344 4.0E-15 T 05-07-2017 IPR001972 Stomatin family GO:0016020 AC028_RS14590 e7213b8ba4557d8bbe4c4d28e4c7ed5e 284 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 9.8E-123 T 05-07-2017 IPR022522 Flagellar motor stator, MotA AC028_RS14590 e7213b8ba4557d8bbe4c4d28e4c7ed5e 284 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 05-07-2017 IPR000540 Flagellar motor protein MotA, conserved site AC028_RS14590 e7213b8ba4557d8bbe4c4d28e4c7ed5e 284 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 232 8.8E-8 T 05-07-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AC028_RS04730 3d8d074bca54504e5b3200bcd89aa0c9 273 SUPERFAMILY SSF53448 11 225 1.48E-31 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS04730 3d8d074bca54504e5b3200bcd89aa0c9 273 Gene3D G3DSA:3.90.550.10 13 131 4.2E-14 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS04730 3d8d074bca54504e5b3200bcd89aa0c9 273 Pfam PF00535 Glycosyl transferase family 2 13 134 1.3E-19 T 05-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AC028_RS17615 efc62dea27ed040d8fa33eedbd5d5d25 280 Hamap MF_00158 Pantothenate synthetase [panC]. 3 280 38.24 T 05-07-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AC028_RS17615 efc62dea27ed040d8fa33eedbd5d5d25 280 SUPERFAMILY SSF52374 3 279 1.6E-99 T 05-07-2017 AC028_RS17615 efc62dea27ed040d8fa33eedbd5d5d25 280 Gene3D G3DSA:3.40.50.620 2 175 3.9E-71 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS17615 efc62dea27ed040d8fa33eedbd5d5d25 280 Pfam PF02569 Pantoate-beta-alanine ligase 4 278 1.8E-94 T 05-07-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AC028_RS17615 efc62dea27ed040d8fa33eedbd5d5d25 280 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 3 278 1.3E-87 T 05-07-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AC028_RS17615 efc62dea27ed040d8fa33eedbd5d5d25 280 Gene3D G3DSA:3.30.1300.10 178 279 1.0E-26 T 05-07-2017 AC028_RS12310 b00a3c6673c13a0bc7f2baeb808df4e0 451 Gene3D G3DSA:3.60.120.10 19 449 2.8E-131 T 05-07-2017 IPR005801 ADC synthase GO:0009058 AC028_RS12310 b00a3c6673c13a0bc7f2baeb808df4e0 451 TIGRFAM TIGR01824 PabB-clade2: aminodeoxychorismate synthase, component I 96 443 3.6E-147 T 05-07-2017 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I AC028_RS12310 b00a3c6673c13a0bc7f2baeb808df4e0 451 SUPERFAMILY SSF56322 7 449 4.71E-123 T 05-07-2017 IPR005801 ADC synthase GO:0009058 AC028_RS12310 b00a3c6673c13a0bc7f2baeb808df4e0 451 PRINTS PR00095 Anthranilate synthase component I signature 382 396 3.1E-18 T 05-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AC028_RS12310 b00a3c6673c13a0bc7f2baeb808df4e0 451 PRINTS PR00095 Anthranilate synthase component I signature 288 301 3.1E-18 T 05-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AC028_RS12310 b00a3c6673c13a0bc7f2baeb808df4e0 451 PRINTS PR00095 Anthranilate synthase component I signature 397 411 3.1E-18 T 05-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AC028_RS12310 b00a3c6673c13a0bc7f2baeb808df4e0 451 PRINTS PR00095 Anthranilate synthase component I signature 302 315 3.1E-18 T 05-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AC028_RS12310 b00a3c6673c13a0bc7f2baeb808df4e0 451 Pfam PF00425 chorismate binding enzyme 187 440 1.1E-92 T 05-07-2017 IPR015890 Chorismate-utilising enzyme, C-terminal AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 SUPERFAMILY SSF55785 430 556 4.34E-27 T 05-07-2017 IPR000014 PAS domain AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 SUPERFAMILY SSF52172 1262 1374 2.13E-13 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 Gene3D G3DSA:3.30.450.20 179 301 1.1E-28 T 05-07-2017 AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 Gene3D G3DSA:3.30.450.20 302 439 6.3E-23 T 05-07-2017 AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 Gene3D G3DSA:3.30.450.40 563 740 3.4E-17 T 05-07-2017 IPR029016 GAF domain-like AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 Gene3D G3DSA:3.30.450.40 741 908 1.8E-12 T 05-07-2017 IPR029016 GAF domain-like AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 Gene3D G3DSA:3.30.450.40 12 176 1.3E-27 T 05-07-2017 IPR029016 GAF domain-like AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 SMART SM00086 257 299 0.078 T 05-07-2017 IPR001610 PAC motif AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 SMART SM00086 987 1029 0.017 T 05-07-2017 IPR001610 PAC motif AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 SMART SM00086 387 433 3.9 T 05-07-2017 IPR001610 PAC motif AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 SMART SM00086 517 559 5.3E-9 T 05-07-2017 IPR001610 PAC motif AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 SUPERFAMILY SSF55785 194 298 1.06E-18 T 05-07-2017 IPR000014 PAS domain AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 SMART SM00911 1042 1123 1.1E-18 T 05-07-2017 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 Gene3D G3DSA:3.30.450.20 440 556 3.4E-28 T 05-07-2017 AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 Gene3D G3DSA:3.30.450.20 909 1027 1.8E-22 T 05-07-2017 AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 Pfam PF13185 GAF domain 594 729 7.7E-8 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 Pfam PF13185 GAF domain 30 166 5.4E-10 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 SMART SM00448 1263 1370 0.0057 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 Gene3D G3DSA:3.40.50.2300 1253 1375 7.4E-12 T 05-07-2017 AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 SUPERFAMILY SSF55781 740 909 1.57E-14 T 05-07-2017 IPR029016 GAF domain-like AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 Pfam PF08447 PAS fold 938 1023 1.7E-11 T 05-07-2017 IPR013655 PAS fold-3 GO:0005515 AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 Pfam PF08447 PAS fold 206 293 1.5E-20 T 05-07-2017 IPR013655 PAS fold-3 GO:0005515 AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 Pfam PF08447 PAS fold 471 552 7.8E-18 T 05-07-2017 IPR013655 PAS fold-3 GO:0005515 AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 SUPERFAMILY SSF55781 26 176 5.89E-20 T 05-07-2017 IPR029016 GAF domain-like AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 SUPERFAMILY SSF55785 296 431 2.62E-14 T 05-07-2017 IPR000014 PAS domain AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 Pfam PF01590 GAF domain 761 897 2.7E-4 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 181 306 2.7E-8 T 05-07-2017 IPR000014 PAS domain AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 441 566 2.3E-14 T 05-07-2017 IPR000014 PAS domain AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 909 1031 9.6E-9 T 05-07-2017 IPR000014 PAS domain AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 SMART SM00065 759 909 3.1E-11 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 SMART SM00065 26 175 1.0E-11 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 SMART SM00065 585 738 6.2E-14 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 SUPERFAMILY SSF55781 568 734 4.14E-19 T 05-07-2017 IPR029016 GAF domain-like AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 SUPERFAMILY SSF55785 901 1027 1.29E-15 T 05-07-2017 IPR000014 PAS domain AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 Pfam PF07536 HWE histidine kinase 1042 1122 2.1E-16 T 05-07-2017 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 SMART SM00091 913 982 0.011 T 05-07-2017 IPR000014 PAS domain AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 SMART SM00091 445 511 1.1E-4 T 05-07-2017 IPR000014 PAS domain AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 SMART SM00091 183 251 0.083 T 05-07-2017 IPR000014 PAS domain AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 SMART SM00091 311 379 1.6 T 05-07-2017 IPR000014 PAS domain AC028_RS19380 33fb083b9665bc0792a7f8fb391c3a9b 1382 Pfam PF00072 Response regulator receiver domain 1265 1369 7.3E-5 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS18145 056d4ad207b48a2b022815be0e17a57a 746 SUPERFAMILY SSF158472 215 264 1.19E-8 T 05-07-2017 AC028_RS18145 056d4ad207b48a2b022815be0e17a57a 746 SMART SM00283 448 695 1.8E-88 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18145 056d4ad207b48a2b022815be0e17a57a 746 SMART SM00304 215 267 1.4E-5 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18145 056d4ad207b48a2b022815be0e17a57a 746 Gene3D G3DSA:1.10.287.950 463 667 1.1E-61 T 05-07-2017 AC028_RS18145 056d4ad207b48a2b022815be0e17a57a 746 Pfam PF12729 Four helix bundle sensory module for signal transduction 9 186 5.2E-12 T 05-07-2017 IPR024478 4HB MCP domain AC028_RS18145 056d4ad207b48a2b022815be0e17a57a 746 Pfam PF00672 HAMP domain 196 264 1.4E-14 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18145 056d4ad207b48a2b022815be0e17a57a 746 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 500 694 3.9E-61 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18145 056d4ad207b48a2b022815be0e17a57a 746 SUPERFAMILY SSF58104 415 700 4.19E-70 T 05-07-2017 AC028_RS16245 3f9baa01c0c9b68fe076a34b80fc94af 589 SUPERFAMILY SSF52540 340 586 4.37E-88 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS16245 3f9baa01c0c9b68fe076a34b80fc94af 589 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 14 586 9.7E-262 T 05-07-2017 IPR011918 ABC transporter, ATP-binding/permease protein AC028_RS16245 3f9baa01c0c9b68fe076a34b80fc94af 589 SMART SM00382 375 561 3.8E-20 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS16245 3f9baa01c0c9b68fe076a34b80fc94af 589 Pfam PF00005 ABC transporter 366 515 1.6E-32 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS16245 3f9baa01c0c9b68fe076a34b80fc94af 589 Gene3D G3DSA:1.20.1560.10 20 334 1.5E-73 T 05-07-2017 AC028_RS16245 3f9baa01c0c9b68fe076a34b80fc94af 589 SUPERFAMILY SSF90123 19 329 1.31E-71 T 05-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AC028_RS16245 3f9baa01c0c9b68fe076a34b80fc94af 589 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS16245 3f9baa01c0c9b68fe076a34b80fc94af 589 Pfam PF00664 ABC transporter transmembrane region 35 296 2.9E-47 T 05-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AC028_RS16245 3f9baa01c0c9b68fe076a34b80fc94af 589 Gene3D G3DSA:3.40.50.300 347 579 2.9E-85 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS13745 da9966a35264decb1da84a30b7cf0a43 65 PIRSF PIRSF037225 2 65 1.6E-29 T 05-07-2017 IPR017143 Uncharacterised conserved protein UCP037225 AC028_RS13745 da9966a35264decb1da84a30b7cf0a43 65 Pfam PF14255 Cysteine-rich CPXCG 10 59 4.1E-22 T 05-07-2017 IPR025990 Cysteine-rich CPXCG protein AC028_RS18895 5558d1c926e82a1a589154b4ee4a818a 189 SUPERFAMILY SSF53448 7 180 8.11E-29 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS18895 5558d1c926e82a1a589154b4ee4a818a 189 Gene3D G3DSA:3.90.550.10 6 183 1.5E-38 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS18895 5558d1c926e82a1a589154b4ee4a818a 189 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 183 18.888 T 05-07-2017 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 AC028_RS18895 5558d1c926e82a1a589154b4ee4a818a 189 Pfam PF12804 MobA-like NTP transferase domain 9 151 2.0E-29 T 05-07-2017 IPR025877 MobA-like NTP transferase AC028_RS13230 9c00825c9fb7a1dbcd6cf6333b51d0dc 85 Gene3D G3DSA:3.30.1320.10 1 79 3.9E-32 T 05-07-2017 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS13230 9c00825c9fb7a1dbcd6cf6333b51d0dc 85 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.433 T 05-07-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS13230 9c00825c9fb7a1dbcd6cf6333b51d0dc 85 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 05-07-2017 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS13230 9c00825c9fb7a1dbcd6cf6333b51d0dc 85 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 5.6E-31 T 05-07-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS13230 9c00825c9fb7a1dbcd6cf6333b51d0dc 85 Pfam PF00886 Ribosomal protein S16 8 68 4.1E-24 T 05-07-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS13230 9c00825c9fb7a1dbcd6cf6333b51d0dc 85 SUPERFAMILY SSF54565 1 78 6.93E-29 T 05-07-2017 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS00205 e1ea4f3ddb8804960425405966ea9516 293 PIRSF PIRSF016184 1 292 2.7E-69 T 05-07-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AC028_RS00205 e1ea4f3ddb8804960425405966ea9516 293 SUPERFAMILY SSF54506 4 290 7.5E-63 T 05-07-2017 AC028_RS00205 e1ea4f3ddb8804960425405966ea9516 293 Pfam PF02567 Phenazine biosynthesis-like protein 9 271 2.7E-51 T 05-07-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AC028_RS00205 e1ea4f3ddb8804960425405966ea9516 293 Gene3D G3DSA:3.10.310.10 2 132 3.4E-38 T 05-07-2017 AC028_RS00205 e1ea4f3ddb8804960425405966ea9516 293 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 275 2.9E-49 T 05-07-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AC028_RS00205 e1ea4f3ddb8804960425405966ea9516 293 Gene3D G3DSA:3.10.310.10 133 281 7.7E-33 T 05-07-2017 AC028_RS19055 6715ae49356d559863981624bcdc0b33 134 Pfam PF00034 Cytochrome c 49 120 6.5E-7 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS19055 6715ae49356d559863981624bcdc0b33 134 Gene3D G3DSA:1.10.760.10 47 121 2.7E-26 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS19055 6715ae49356d559863981624bcdc0b33 134 SUPERFAMILY SSF46626 55 123 1.06E-19 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS19055 6715ae49356d559863981624bcdc0b33 134 PRINTS PR00605 Class IC cytochrome C signature 55 66 8.7E-5 T 05-07-2017 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AC028_RS19055 6715ae49356d559863981624bcdc0b33 134 PRINTS PR00605 Class IC cytochrome C signature 98 120 8.7E-5 T 05-07-2017 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AC028_RS05440 901c077df7e8a114495b28b65988f95e 170 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 107 129 1.4E-35 T 05-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AC028_RS05440 901c077df7e8a114495b28b65988f95e 170 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 23 40 1.4E-35 T 05-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AC028_RS05440 901c077df7e8a114495b28b65988f95e 170 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 83 103 1.4E-35 T 05-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AC028_RS05440 901c077df7e8a114495b28b65988f95e 170 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 133 151 1.4E-35 T 05-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AC028_RS05440 901c077df7e8a114495b28b65988f95e 170 Hamap MF_00821 Protein-export protein SecB [secB]. 1 155 32.097 T 05-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AC028_RS05440 901c077df7e8a114495b28b65988f95e 170 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 18 153 5.8E-48 T 05-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AC028_RS05440 901c077df7e8a114495b28b65988f95e 170 Gene3D G3DSA:3.10.420.10 15 158 3.6E-54 T 05-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AC028_RS05440 901c077df7e8a114495b28b65988f95e 170 Pfam PF02556 Preprotein translocase subunit SecB 16 153 2.9E-53 T 05-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AC028_RS05440 901c077df7e8a114495b28b65988f95e 170 SUPERFAMILY SSF54611 19 150 4.14E-47 T 05-07-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AC028_RS17285 de57180be0b8b6cfa28cb73a6bf1e8f4 369 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 77 90 - T 05-07-2017 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 AC028_RS17285 de57180be0b8b6cfa28cb73a6bf1e8f4 369 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 5 357 29.271 T 05-07-2017 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS17285 de57180be0b8b6cfa28cb73a6bf1e8f4 369 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 198 351 6.7E-17 T 05-07-2017 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS17285 de57180be0b8b6cfa28cb73a6bf1e8f4 369 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 18 168 2.1E-37 T 05-07-2017 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS17285 de57180be0b8b6cfa28cb73a6bf1e8f4 369 SUPERFAMILY SSF55120 4 353 2.73E-89 T 05-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS16215 6db212ea1370972ca07560fe82a19f3c 373 Pfam PF02153 Prephenate dehydrogenase 44 252 2.0E-25 T 05-07-2017 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 AC028_RS16215 6db212ea1370972ca07560fe82a19f3c 373 SUPERFAMILY SSF51735 7 151 1.46E-22 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS16215 6db212ea1370972ca07560fe82a19f3c 373 SUPERFAMILY SSF48179 154 254 3.17E-19 T 05-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AC028_RS16215 6db212ea1370972ca07560fe82a19f3c 373 Gene3D G3DSA:1.10.3660.10 162 259 5.0E-16 T 05-07-2017 AC028_RS16215 6db212ea1370972ca07560fe82a19f3c 373 Gene3D G3DSA:3.40.50.720 5 160 7.7E-28 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS16215 6db212ea1370972ca07560fe82a19f3c 373 Pfam PF01842 ACT domain 297 355 1.7E-7 T 05-07-2017 IPR002912 ACT domain GO:0008152|GO:0016597 AC028_RS16215 6db212ea1370972ca07560fe82a19f3c 373 Gene3D G3DSA:3.30.70.260 297 361 2.0E-8 T 05-07-2017 AC028_RS16215 6db212ea1370972ca07560fe82a19f3c 373 SUPERFAMILY SSF55021 296 362 1.3E-9 T 05-07-2017 AC028_RS03555 d7fe501a18ab8afb8a8652c35ecbacbb 347 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 20 320 3.1E-122 T 05-07-2017 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 AC028_RS03555 d7fe501a18ab8afb8a8652c35ecbacbb 347 Pfam PF00437 Type II/IV secretion system protein 32 298 1.6E-77 T 05-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AC028_RS03555 d7fe501a18ab8afb8a8652c35ecbacbb 347 SUPERFAMILY SSF52540 25 298 2.57E-36 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS03555 d7fe501a18ab8afb8a8652c35ecbacbb 347 Gene3D G3DSA:3.30.450.90 33 124 4.0E-12 T 05-07-2017 AC028_RS03555 d7fe501a18ab8afb8a8652c35ecbacbb 347 Gene3D G3DSA:3.40.50.300 136 322 3.8E-49 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS16100 3c1ea31b502a9db1c2dc2b8bcfe0ad58 457 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 13 449 37.307 T 05-07-2017 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 AC028_RS16100 3c1ea31b502a9db1c2dc2b8bcfe0ad58 457 SUPERFAMILY SSF118215 20 423 4.84E-114 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS16100 3c1ea31b502a9db1c2dc2b8bcfe0ad58 457 Gene3D G3DSA:1.10.3860.10 17 427 1.4E-112 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS16100 3c1ea31b502a9db1c2dc2b8bcfe0ad58 457 PRINTS PR00173 Glutamate-aspartate symporter signature 85 110 3.0E-27 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS16100 3c1ea31b502a9db1c2dc2b8bcfe0ad58 457 PRINTS PR00173 Glutamate-aspartate symporter signature 166 188 3.0E-27 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS16100 3c1ea31b502a9db1c2dc2b8bcfe0ad58 457 PRINTS PR00173 Glutamate-aspartate symporter signature 313 339 3.0E-27 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS16100 3c1ea31b502a9db1c2dc2b8bcfe0ad58 457 PRINTS PR00173 Glutamate-aspartate symporter signature 348 367 3.0E-27 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS16100 3c1ea31b502a9db1c2dc2b8bcfe0ad58 457 PRINTS PR00173 Glutamate-aspartate symporter signature 18 38 3.0E-27 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS16100 3c1ea31b502a9db1c2dc2b8bcfe0ad58 457 PRINTS PR00173 Glutamate-aspartate symporter signature 213 232 3.0E-27 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS16100 3c1ea31b502a9db1c2dc2b8bcfe0ad58 457 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 316 339 - T 05-07-2017 IPR018107 Sodium:dicarboxylate symporter, conserved site AC028_RS16100 3c1ea31b502a9db1c2dc2b8bcfe0ad58 457 Pfam PF00375 Sodium:dicarboxylate symporter family 20 422 8.3E-105 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS16100 3c1ea31b502a9db1c2dc2b8bcfe0ad58 457 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 47 62 - T 05-07-2017 IPR018107 Sodium:dicarboxylate symporter, conserved site AC028_RS10795 770667b4b7127455f3b07649b2645d66 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 3.2E-8 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS10795 770667b4b7127455f3b07649b2645d66 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 3.2E-8 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS10795 770667b4b7127455f3b07649b2645d66 190 SUPERFAMILY SSF46689 2 80 1.8E-14 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS10795 770667b4b7127455f3b07649b2645d66 190 SUPERFAMILY SSF48498 80 180 7.63E-10 T 05-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AC028_RS10795 770667b4b7127455f3b07649b2645d66 190 Gene3D G3DSA:1.10.357.10 5 181 2.9E-31 T 05-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AC028_RS10795 770667b4b7127455f3b07649b2645d66 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 4.7E-10 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS01010 a072b395d9052e913001336db01a4915 185 Gene3D G3DSA:3.90.79.10 22 183 7.2E-37 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS01010 a072b395d9052e913001336db01a4915 185 ProSitePatterns PS00893 Nudix box signature. 81 102 - T 05-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AC028_RS01010 a072b395d9052e913001336db01a4915 185 Pfam PF00293 NUDIX domain 47 159 1.1E-15 T 05-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AC028_RS01010 a072b395d9052e913001336db01a4915 185 SUPERFAMILY SSF55811 10 181 1.62E-36 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS02355 d6185757ccc601ed51afe4470d80a30a 391 Pfam PF16670 Phosphoinositide phospholipase C, Ca2+-dependent 49 377 3.0E-130 T 05-07-2017 IPR032075 Phosphoinositide phospholipase C, Ca2+-dependent AC028_RS02355 d6185757ccc601ed51afe4470d80a30a 391 Gene3D G3DSA:3.20.20.190 161 267 1.3E-4 T 05-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AC028_RS02355 d6185757ccc601ed51afe4470d80a30a 391 Gene3D G3DSA:3.20.20.190 90 124 1.3E-4 T 05-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AC028_RS02355 d6185757ccc601ed51afe4470d80a30a 391 SUPERFAMILY SSF51695 49 112 6.28E-26 T 05-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AC028_RS02355 d6185757ccc601ed51afe4470d80a30a 391 SUPERFAMILY SSF51695 145 319 6.28E-26 T 05-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AC028_RS21380 cba3d4df33912cefb0d3c529f0b9e9b7 557 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 122 550 2.4E-111 T 05-07-2017 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 AC028_RS21380 cba3d4df33912cefb0d3c529f0b9e9b7 557 SUPERFAMILY SSF52540 81 543 9.03E-59 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS21380 cba3d4df33912cefb0d3c529f0b9e9b7 557 Gene3D G3DSA:3.40.50.300 344 539 1.8E-54 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS21380 cba3d4df33912cefb0d3c529f0b9e9b7 557 Gene3D G3DSA:3.40.50.300 81 199 1.8E-54 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19685 401b30915003e099eed09ca21e8ee9ba 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 1.5E-7 T 05-07-2017 AC028_RS19685 401b30915003e099eed09ca21e8ee9ba 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 1.5E-7 T 05-07-2017 AC028_RS19685 401b30915003e099eed09ca21e8ee9ba 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 173 186 1.5E-7 T 05-07-2017 AC028_RS19685 401b30915003e099eed09ca21e8ee9ba 521 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 208 521 1.5E-149 T 05-07-2017 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AC028_RS19685 401b30915003e099eed09ca21e8ee9ba 521 Pfam PF00958 GMP synthase C terminal domain 429 520 3.0E-42 T 05-07-2017 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AC028_RS19685 401b30915003e099eed09ca21e8ee9ba 521 SUPERFAMILY SSF52317 4 201 4.43E-54 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS19685 401b30915003e099eed09ca21e8ee9ba 521 Gene3D G3DSA:3.30.300.10 397 521 5.7E-52 T 05-07-2017 AC028_RS19685 401b30915003e099eed09ca21e8ee9ba 521 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 9 200 9.5E-74 T 05-07-2017 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AC028_RS19685 401b30915003e099eed09ca21e8ee9ba 521 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 2.7E-6 T 05-07-2017 AC028_RS19685 401b30915003e099eed09ca21e8ee9ba 521 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 9 23 2.7E-6 T 05-07-2017 AC028_RS19685 401b30915003e099eed09ca21e8ee9ba 521 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 96 2.7E-6 T 05-07-2017 AC028_RS19685 401b30915003e099eed09ca21e8ee9ba 521 SUPERFAMILY SSF52402 193 415 4.19E-58 T 05-07-2017 AC028_RS19685 401b30915003e099eed09ca21e8ee9ba 521 Gene3D G3DSA:3.40.50.620 219 395 5.8E-58 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS19685 401b30915003e099eed09ca21e8ee9ba 521 Pfam PF02540 NAD synthase 211 295 2.4E-8 T 05-07-2017 IPR022310 NAD/GMP synthase AC028_RS19685 401b30915003e099eed09ca21e8ee9ba 521 Pfam PF00117 Glutamine amidotransferase class-I 11 196 6.0E-39 T 05-07-2017 IPR017926 Glutamine amidotransferase AC028_RS19685 401b30915003e099eed09ca21e8ee9ba 521 SUPERFAMILY SSF54810 401 521 4.05E-49 T 05-07-2017 AC028_RS19685 401b30915003e099eed09ca21e8ee9ba 521 PRINTS PR00097 Anthranilate synthase component II signature 80 91 3.5E-6 T 05-07-2017 AC028_RS19685 401b30915003e099eed09ca21e8ee9ba 521 PRINTS PR00097 Anthranilate synthase component II signature 53 62 3.5E-6 T 05-07-2017 AC028_RS19685 401b30915003e099eed09ca21e8ee9ba 521 PRINTS PR00097 Anthranilate synthase component II signature 173 186 3.5E-6 T 05-07-2017 AC028_RS19685 401b30915003e099eed09ca21e8ee9ba 521 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 521 55.195 T 05-07-2017 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 AC028_RS19685 401b30915003e099eed09ca21e8ee9ba 521 Gene3D G3DSA:3.40.50.880 3 218 6.9E-57 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS02080 c7fe7e74cfbc6c40897e686782ae912b 305 Gene3D G3DSA:3.30.1330.30 59 133 5.3E-15 T 05-07-2017 IPR029064 50S ribosomal protein L30e-like AC028_RS02080 c7fe7e74cfbc6c40897e686782ae912b 305 Pfam PF00588 SpoU rRNA Methylase family 155 292 4.7E-29 T 05-07-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AC028_RS02080 c7fe7e74cfbc6c40897e686782ae912b 305 SMART SM00967 64 139 2.2E-13 T 05-07-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AC028_RS02080 c7fe7e74cfbc6c40897e686782ae912b 305 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 65 133 7.1E-13 T 05-07-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AC028_RS02080 c7fe7e74cfbc6c40897e686782ae912b 305 SUPERFAMILY SSF75217 150 298 4.25E-31 T 05-07-2017 IPR029028 Alpha/beta knot methyltransferases AC028_RS02080 c7fe7e74cfbc6c40897e686782ae912b 305 Gene3D G3DSA:3.40.1280.10 153 295 3.7E-36 T 05-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AC028_RS02080 c7fe7e74cfbc6c40897e686782ae912b 305 SUPERFAMILY SSF55315 60 133 6.36E-12 T 05-07-2017 IPR029064 50S ribosomal protein L30e-like AC028_RS18500 722e03d0ab28967fb52657fb78420726 320 SMART SM01126 137 285 1.7E-48 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS18500 722e03d0ab28967fb52657fb78420726 320 Pfam PF12762 ISXO2-like transposase domain 137 285 2.4E-32 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS18500 722e03d0ab28967fb52657fb78420726 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS11280 192119e7839cf086943e2d11bb9a1157 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 45 207 35.993 T 05-07-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AC028_RS11280 192119e7839cf086943e2d11bb9a1157 212 Pfam PF01625 Peptide methionine sulfoxide reductase 48 201 4.8E-62 T 05-07-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AC028_RS11280 192119e7839cf086943e2d11bb9a1157 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 47 201 2.3E-60 T 05-07-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AC028_RS11280 192119e7839cf086943e2d11bb9a1157 212 SUPERFAMILY SSF55068 9 211 5.1E-75 T 05-07-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AC028_RS11280 192119e7839cf086943e2d11bb9a1157 212 Gene3D G3DSA:3.30.1060.10 9 201 6.3E-74 T 05-07-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AC028_RS04205 8e08daf9e08b55e463b2bb21643041b5 456 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 304 311 - T 05-07-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AC028_RS04205 8e08daf9e08b55e463b2bb21643041b5 456 PRINTS PR00481 Cytosol aminopeptidase signature 241 262 2.1E-42 T 05-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AC028_RS04205 8e08daf9e08b55e463b2bb21643041b5 456 PRINTS PR00481 Cytosol aminopeptidase signature 278 299 2.1E-42 T 05-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AC028_RS04205 8e08daf9e08b55e463b2bb21643041b5 456 PRINTS PR00481 Cytosol aminopeptidase signature 300 320 2.1E-42 T 05-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AC028_RS04205 8e08daf9e08b55e463b2bb21643041b5 456 PRINTS PR00481 Cytosol aminopeptidase signature 219 236 2.1E-42 T 05-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AC028_RS04205 8e08daf9e08b55e463b2bb21643041b5 456 PRINTS PR00481 Cytosol aminopeptidase signature 328 343 2.1E-42 T 05-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AC028_RS04205 8e08daf9e08b55e463b2bb21643041b5 456 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 146 430 2.7E-100 T 05-07-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AC028_RS04205 8e08daf9e08b55e463b2bb21643041b5 456 SUPERFAMILY SSF53187 139 453 3.14E-105 T 05-07-2017 AC028_RS04205 8e08daf9e08b55e463b2bb21643041b5 456 Gene3D G3DSA:3.40.630.10 136 453 9.3E-114 T 05-07-2017 AC028_RS19500 f3d4b960cbccb76105503757d64eb4ac 196 Pfam PF01596 O-methyltransferase 27 162 5.7E-22 T 05-07-2017 IPR002935 O-methyltransferase, family 3 GO:0008171 AC028_RS19500 f3d4b960cbccb76105503757d64eb4ac 196 Gene3D G3DSA:3.40.50.150 21 193 7.1E-43 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS19500 f3d4b960cbccb76105503757d64eb4ac 196 SUPERFAMILY SSF53335 23 193 8.05E-31 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS17190 2044f234b1b3f37004aaae3058a62771 474 ProSitePatterns PS00217 Sugar transport proteins signature 2. 138 163 - T 05-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AC028_RS17190 2044f234b1b3f37004aaae3058a62771 474 Pfam PF00083 Sugar (and other) transporter 39 470 7.8E-30 T 05-07-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AC028_RS17190 2044f234b1b3f37004aaae3058a62771 474 SUPERFAMILY SSF103473 20 469 2.75E-59 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS17190 2044f234b1b3f37004aaae3058a62771 474 ProSitePatterns PS00216 Sugar transport proteins signature 1. 96 112 - T 05-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AC028_RS17190 2044f234b1b3f37004aaae3058a62771 474 Gene3D G3DSA:1.20.1250.20 282 467 2.6E-15 T 05-07-2017 AC028_RS17190 2044f234b1b3f37004aaae3058a62771 474 Gene3D G3DSA:1.20.1250.20 34 228 3.7E-20 T 05-07-2017 AC028_RS21510 8b115f36714339ed1f2b25f15dee98c0 295 PIRSF PIRSF006250 14 291 2.1E-82 T 05-07-2017 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 AC028_RS21510 8b115f36714339ed1f2b25f15dee98c0 295 SUPERFAMILY SSF51690 120 289 2.35E-52 T 05-07-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AC028_RS21510 8b115f36714339ed1f2b25f15dee98c0 295 Gene3D G3DSA:3.90.1170.20 13 139 3.6E-45 T 05-07-2017 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AC028_RS21510 8b115f36714339ed1f2b25f15dee98c0 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 30 117 1.3E-20 T 05-07-2017 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AC028_RS21510 8b115f36714339ed1f2b25f15dee98c0 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 120 288 9.4E-52 T 05-07-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AC028_RS21510 8b115f36714339ed1f2b25f15dee98c0 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 22 288 1.3E-81 T 05-07-2017 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 AC028_RS21510 8b115f36714339ed1f2b25f15dee98c0 295 SUPERFAMILY SSF54675 15 117 1.37E-26 T 05-07-2017 AC028_RS21510 8b115f36714339ed1f2b25f15dee98c0 295 Gene3D G3DSA:3.20.20.70 140 278 2.1E-52 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS16920 55a0c76e10f9d785a4210bad8391871f 218 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 1 205 26.852 T 05-07-2017 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 AC028_RS16920 55a0c76e10f9d785a4210bad8391871f 218 Pfam PF01794 Ferric reductase like transmembrane component 53 166 8.8E-18 T 05-07-2017 IPR013130 Ferric reductase transmembrane component-like domain AC028_RS05330 2120b4e566e2b1d5656587de22c00274 336 Gene3D G3DSA:3.40.50.720 166 283 3.0E-34 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS05330 2120b4e566e2b1d5656587de22c00274 336 Pfam PF00107 Zinc-binding dehydrogenase 171 298 1.2E-27 T 05-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AC028_RS05330 2120b4e566e2b1d5656587de22c00274 336 SUPERFAMILY SSF50129 10 165 1.73E-29 T 05-07-2017 IPR011032 GroES-like AC028_RS05330 2120b4e566e2b1d5656587de22c00274 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 129 3.2E-7 T 05-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AC028_RS05330 2120b4e566e2b1d5656587de22c00274 336 SUPERFAMILY SSF51735 136 314 1.53E-45 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS05330 2120b4e566e2b1d5656587de22c00274 336 Gene3D G3DSA:3.90.180.10 10 165 1.1E-30 T 05-07-2017 IPR011032 GroES-like AC028_RS05330 2120b4e566e2b1d5656587de22c00274 336 SMART SM00829 11 334 1.4E-16 T 05-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AC028_RS21865 0cd45a10124b4ce1b3b8e80103580950 671 Gene3D G3DSA:3.40.390.10 300 421 2.6E-71 T 05-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AC028_RS21865 0cd45a10124b4ce1b3b8e80103580950 671 Gene3D G3DSA:3.40.390.10 461 670 2.6E-71 T 05-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AC028_RS21865 0cd45a10124b4ce1b3b8e80103580950 671 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 480 492 1.7E-5 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS21865 0cd45a10124b4ce1b3b8e80103580950 671 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 501 517 1.7E-5 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS21865 0cd45a10124b4ce1b3b8e80103580950 671 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 574 585 1.7E-5 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS21865 0cd45a10124b4ce1b3b8e80103580950 671 Pfam PF05649 Peptidase family M13 44 418 2.5E-65 T 05-07-2017 IPR008753 Peptidase M13, N-terminal domain GO:0006508 AC028_RS21865 0cd45a10124b4ce1b3b8e80103580950 671 SUPERFAMILY SSF55486 43 670 6.88E-139 T 05-07-2017 AC028_RS21865 0cd45a10124b4ce1b3b8e80103580950 671 Pfam PF01431 Peptidase family M13 473 663 1.0E-41 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS05375 30e08497a39529415af54c1b88e7bae8 159 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 45 67 1.2E-7 T 05-07-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS05375 30e08497a39529415af54c1b88e7bae8 159 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 122 148 1.2E-7 T 05-07-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS05375 30e08497a39529415af54c1b88e7bae8 159 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 82 91 1.2E-7 T 05-07-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS05375 30e08497a39529415af54c1b88e7bae8 159 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 136 147 - T 05-07-2017 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS05375 30e08497a39529415af54c1b88e7bae8 159 SUPERFAMILY SSF49329 5 147 3.27E-41 T 05-07-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS05375 30e08497a39529415af54c1b88e7bae8 159 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 14 147 7.8E-37 T 05-07-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS05375 30e08497a39529415af54c1b88e7bae8 159 Gene3D G3DSA:2.60.40.200 7 150 1.2E-45 T 05-07-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS05375 30e08497a39529415af54c1b88e7bae8 159 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 45 55 - T 05-07-2017 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS10140 9f905fc6bbd760512995ec545f06fa5b 146 Gene3D G3DSA:3.40.50.2300 6 133 1.8E-31 T 05-07-2017 AC028_RS10140 9f905fc6bbd760512995ec545f06fa5b 146 Pfam PF00072 Response regulator receiver domain 7 129 2.7E-18 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS10140 9f905fc6bbd760512995ec545f06fa5b 146 SUPERFAMILY SSF52172 6 141 1.34E-29 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS10140 9f905fc6bbd760512995ec545f06fa5b 146 SMART SM00448 5 129 8.7E-23 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS11795 e7f6507d1f5e0e31d91c3875dd0eed6b 375 Gene3D G3DSA:2.30.30.60 194 243 2.7E-5 T 05-07-2017 AC028_RS11795 e7f6507d1f5e0e31d91c3875dd0eed6b 375 Pfam PF00924 Mechanosensitive ion channel 139 331 1.6E-23 T 05-07-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AC028_RS11795 e7f6507d1f5e0e31d91c3875dd0eed6b 375 SUPERFAMILY SSF50182 179 244 7.85E-13 T 05-07-2017 IPR010920 LSM domain AC028_RS16405 4818cb35e8fb9d3d45878aa2833624f7 917 SUPERFAMILY SSF52242 413 563 8.63E-44 T 05-07-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AC028_RS16405 4818cb35e8fb9d3d45878aa2833624f7 917 Gene3D G3DSA:1.10.1240.10 316 402 1.5E-37 T 05-07-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AC028_RS16405 4818cb35e8fb9d3d45878aa2833624f7 917 Pfam PF00809 Pterin binding enzyme 27 265 4.9E-61 T 05-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AC028_RS16405 4818cb35e8fb9d3d45878aa2833624f7 917 Pfam PF02607 B12 binding domain 325 397 1.9E-26 T 05-07-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AC028_RS16405 4818cb35e8fb9d3d45878aa2833624f7 917 PIRSF PIRSF000381 1 885 0.0 T 05-07-2017 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AC028_RS16405 4818cb35e8fb9d3d45878aa2833624f7 917 Gene3D G3DSA:3.20.20.20 23 303 8.4E-113 T 05-07-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AC028_RS16405 4818cb35e8fb9d3d45878aa2833624f7 917 Pfam PF02310 B12 binding domain 417 508 1.1E-19 T 05-07-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AC028_RS16405 4818cb35e8fb9d3d45878aa2833624f7 917 TIGRFAM TIGR02082 metH: methionine synthase 4 882 0.0 T 05-07-2017 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AC028_RS16405 4818cb35e8fb9d3d45878aa2833624f7 917 Gene3D G3DSA:3.40.50.280 413 563 1.2E-61 T 05-07-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AC028_RS16405 4818cb35e8fb9d3d45878aa2833624f7 917 Gene3D G3DSA:3.10.196.10 627 917 2.9E-107 T 05-07-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AC028_RS16405 4818cb35e8fb9d3d45878aa2833624f7 917 SUPERFAMILY SSF51717 23 297 2.22E-87 T 05-07-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AC028_RS16405 4818cb35e8fb9d3d45878aa2833624f7 917 SMART SM01018 322 405 9.6E-45 T 05-07-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AC028_RS16405 4818cb35e8fb9d3d45878aa2833624f7 917 SUPERFAMILY SSF47644 317 404 2.09E-28 T 05-07-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AC028_RS16405 4818cb35e8fb9d3d45878aa2833624f7 917 SUPERFAMILY SSF56507 571 917 4.84E-126 T 05-07-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AC028_RS16405 4818cb35e8fb9d3d45878aa2833624f7 917 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 608 898 2.9E-122 T 05-07-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AC028_RS20905 5ce3dfbb7469ef8155b920af915a9804 838 SUPERFAMILY SSF56935 49 374 1.98E-92 T 05-07-2017 AC028_RS20905 5ce3dfbb7469ef8155b920af915a9804 838 SUPERFAMILY SSF56935 404 438 1.98E-92 T 05-07-2017 AC028_RS20905 5ce3dfbb7469ef8155b920af915a9804 838 SUPERFAMILY SSF56935 480 836 1.98E-92 T 05-07-2017 AC028_RS20905 5ce3dfbb7469ef8155b920af915a9804 838 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 153 3.5E-16 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS20905 5ce3dfbb7469ef8155b920af915a9804 838 Gene3D G3DSA:2.170.130.10 56 155 2.1E-18 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS20905 5ce3dfbb7469ef8155b920af915a9804 838 Pfam PF00593 TonB dependent receptor 572 836 1.6E-31 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS20905 5ce3dfbb7469ef8155b920af915a9804 838 Gene3D G3DSA:2.40.170.20 507 836 9.8E-64 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS20905 5ce3dfbb7469ef8155b920af915a9804 838 Gene3D G3DSA:2.40.170.20 156 463 9.8E-64 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS20905 5ce3dfbb7469ef8155b920af915a9804 838 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 29 837 8.8E-228 T 05-07-2017 IPR010104 Bacterial TonB-dependent receptor AC028_RS21810 3db814e2c1b1d09bf80e90f1573b51c6 144 PIRSF PIRSF000714 12 144 7.6E-48 T 05-07-2017 IPR026026 Histidine triad hydrolase, Hint-type AC028_RS21810 3db814e2c1b1d09bf80e90f1573b51c6 144 Gene3D G3DSA:3.30.428.10 20 143 9.8E-27 T 05-07-2017 IPR011146 HIT-like domain GO:0003824 AC028_RS21810 3db814e2c1b1d09bf80e90f1573b51c6 144 Pfam PF01230 HIT domain 22 108 2.5E-8 T 05-07-2017 IPR001310 Histidine triad (HIT) protein AC028_RS21810 3db814e2c1b1d09bf80e90f1573b51c6 144 SUPERFAMILY SSF54197 20 143 1.32E-28 T 05-07-2017 IPR011146 HIT-like domain GO:0003824 AC028_RS07630 b6230a3c9a2a3202e3eb22d43b059d95 215 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 84 171 1.2E-18 T 05-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AC028_RS07630 b6230a3c9a2a3202e3eb22d43b059d95 215 SUPERFAMILY SSF56214 29 75 5.23E-5 T 05-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AC028_RS07630 b6230a3c9a2a3202e3eb22d43b059d95 215 SUPERFAMILY SSF56214 83 193 3.92E-27 T 05-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AC028_RS07630 b6230a3c9a2a3202e3eb22d43b059d95 215 Gene3D G3DSA:3.90.470.20 96 191 1.2E-23 T 05-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AC028_RS07630 b6230a3c9a2a3202e3eb22d43b059d95 215 Gene3D G3DSA:3.90.470.20 30 95 7.6E-11 T 05-07-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AC028_RS08355 5a3d6bec7fc4fda67a97d030e98c8f84 455 SUPERFAMILY SSF51246 331 444 1.05E-44 T 05-07-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS08355 5a3d6bec7fc4fda67a97d030e98c8f84 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 05-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AC028_RS08355 5a3d6bec7fc4fda67a97d030e98c8f84 455 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.2E-40 T 05-07-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS08355 5a3d6bec7fc4fda67a97d030e98c8f84 455 SMART SM00878 336 441 7.0E-69 T 05-07-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS08355 5a3d6bec7fc4fda67a97d030e98c8f84 455 Gene3D G3DSA:3.30.1490.20 130 203 1.9E-29 T 05-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AC028_RS08355 5a3d6bec7fc4fda67a97d030e98c8f84 455 SUPERFAMILY SSF56059 83 344 2.3E-67 T 05-07-2017 AC028_RS08355 5a3d6bec7fc4fda67a97d030e98c8f84 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 7.3E-232 T 05-07-2017 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AC028_RS08355 5a3d6bec7fc4fda67a97d030e98c8f84 455 Gene3D G3DSA:3.40.50.20 1 129 6.2E-51 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS08355 5a3d6bec7fc4fda67a97d030e98c8f84 455 Gene3D G3DSA:3.30.470.20 204 444 5.4E-98 T 05-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AC028_RS08355 5a3d6bec7fc4fda67a97d030e98c8f84 455 SUPERFAMILY SSF52440 1 113 5.11E-47 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS08355 5a3d6bec7fc4fda67a97d030e98c8f84 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 05-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AC028_RS08355 5a3d6bec7fc4fda67a97d030e98c8f84 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 7.8E-82 T 05-07-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AC028_RS08355 5a3d6bec7fc4fda67a97d030e98c8f84 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.8E-44 T 05-07-2017 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS06795 db70512578e28f45788fa970a649b0e7 803 Pfam PF13538 UvrD-like helicase C-terminal domain 700 746 1.5E-14 T 05-07-2017 IPR027785 UvrD-like helicase C-terminal domain AC028_RS06795 db70512578e28f45788fa970a649b0e7 803 SUPERFAMILY SSF52540 360 454 3.03E-35 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06795 db70512578e28f45788fa970a649b0e7 803 SUPERFAMILY SSF52540 8 153 3.03E-35 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06795 db70512578e28f45788fa970a649b0e7 803 SUPERFAMILY SSF52540 188 277 3.03E-35 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06795 db70512578e28f45788fa970a649b0e7 803 Pfam PF13604 AAA domain 355 438 6.2E-16 T 05-07-2017 AC028_RS06795 db70512578e28f45788fa970a649b0e7 803 Gene3D G3DSA:3.40.50.300 479 505 2.0E-40 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06795 db70512578e28f45788fa970a649b0e7 803 Gene3D G3DSA:3.40.50.300 688 758 2.0E-40 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06795 db70512578e28f45788fa970a649b0e7 803 Gene3D G3DSA:3.40.50.300 539 585 2.0E-40 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06795 db70512578e28f45788fa970a649b0e7 803 Gene3D G3DSA:3.40.50.300 415 428 2.0E-40 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06795 db70512578e28f45788fa970a649b0e7 803 SUPERFAMILY SSF52540 472 503 7.21E-47 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06795 db70512578e28f45788fa970a649b0e7 803 SUPERFAMILY SSF52540 674 771 7.21E-47 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06795 db70512578e28f45788fa970a649b0e7 803 SUPERFAMILY SSF52540 399 439 7.21E-47 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06795 db70512578e28f45788fa970a649b0e7 803 SUPERFAMILY SSF52540 555 629 7.21E-47 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06795 db70512578e28f45788fa970a649b0e7 803 Pfam PF13245 Part of AAA domain 199 269 2.1E-14 T 05-07-2017 AC028_RS06795 db70512578e28f45788fa970a649b0e7 803 Gene3D G3DSA:3.40.50.300 354 414 2.2E-16 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06795 db70512578e28f45788fa970a649b0e7 803 Gene3D G3DSA:3.40.50.300 196 299 2.2E-16 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06795 db70512578e28f45788fa970a649b0e7 803 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 16 769 43.333 T 05-07-2017 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AC028_RS01795 eea0d9c9e5b3cf9629acd77d62913c4b 622 Gene3D G3DSA:1.10.287.950 369 573 4.7E-61 T 05-07-2017 AC028_RS01795 eea0d9c9e5b3cf9629acd77d62913c4b 622 SUPERFAMILY SSF58104 321 605 2.49E-72 T 05-07-2017 AC028_RS01795 eea0d9c9e5b3cf9629acd77d62913c4b 622 SMART SM00283 354 601 8.7E-91 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS01795 eea0d9c9e5b3cf9629acd77d62913c4b 622 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 481 510 8.8E-56 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS01795 eea0d9c9e5b3cf9629acd77d62913c4b 622 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 529 558 8.8E-56 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS01795 eea0d9c9e5b3cf9629acd77d62913c4b 622 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 404 8.8E-56 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS01795 eea0d9c9e5b3cf9629acd77d62913c4b 622 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 452 479 8.8E-56 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS01795 eea0d9c9e5b3cf9629acd77d62913c4b 622 Gene3D G3DSA:3.30.450.20 146 264 5.2E-4 T 05-07-2017 AC028_RS01795 eea0d9c9e5b3cf9629acd77d62913c4b 622 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 422 600 2.1E-62 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS11085 e219ee0eccc84b06d44564552ce60fda 322 Gene3D G3DSA:3.40.718.10 3 321 7.9E-119 T 05-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AC028_RS11085 e219ee0eccc84b06d44564552ce60fda 322 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 319 34.22 T 05-07-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AC028_RS11085 e219ee0eccc84b06d44564552ce60fda 322 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 33 314 2.1E-99 T 05-07-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AC028_RS11085 e219ee0eccc84b06d44564552ce60fda 322 SUPERFAMILY SSF53659 3 321 3.52E-102 T 05-07-2017 AC028_RS11085 e219ee0eccc84b06d44564552ce60fda 322 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 318 1.4E-116 T 05-07-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AC028_RS15060 dc1e9e99d6c6425e85ee0d6d63ded74c 220 SUPERFAMILY SSF47616 88 217 4.69E-30 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS15060 dc1e9e99d6c6425e85ee0d6d63ded74c 220 SUPERFAMILY SSF52833 5 110 1.12E-18 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS15060 dc1e9e99d6c6425e85ee0d6d63ded74c 220 Gene3D G3DSA:1.20.1050.10 101 218 7.3E-52 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS15060 dc1e9e99d6c6425e85ee0d6d63ded74c 220 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 7 218 5.5E-88 T 05-07-2017 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-71182 AC028_RS15060 dc1e9e99d6c6425e85ee0d6d63ded74c 220 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 84 6.5E-13 T 05-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AC028_RS15060 dc1e9e99d6c6425e85ee0d6d63ded74c 220 Gene3D G3DSA:3.40.30.10 3 100 4.1E-25 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS03430 ba50280e5cf9d7be7f9a9318bf1823c5 104 Pfam PF05284 Protein of unknown function (DUF736) 3 98 3.0E-35 T 05-07-2017 IPR007948 Protein of unknown function DUF736 AC028_RS16655 fa7c30d28067b6079c0e8a9f4b2a0227 228 PIRSF PIRSF028451 1 228 7.8E-98 T 05-07-2017 IPR015996 Uncharacterised conserved protein UCP028451 AC028_RS16655 fa7c30d28067b6079c0e8a9f4b2a0227 228 Pfam PF09365 Conserved hypothetical protein (DUF2461) 9 219 1.4E-59 T 05-07-2017 IPR012808 Conserved hypothetical protein CHP02453 AC028_RS16655 fa7c30d28067b6079c0e8a9f4b2a0227 228 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 6 225 1.3E-82 T 05-07-2017 IPR012808 Conserved hypothetical protein CHP02453 AC028_RS05960 6996c8d984b98d667b41906e075bc574 326 Gene3D G3DSA:3.40.50.80 109 222 3.9E-23 T 05-07-2017 AC028_RS05960 6996c8d984b98d667b41906e075bc574 326 Pfam PF00970 Oxidoreductase FAD-binding domain 35 103 5.0E-5 T 05-07-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AC028_RS05960 6996c8d984b98d667b41906e075bc574 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 34 44 1.0E-35 T 05-07-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 AC028_RS05960 6996c8d984b98d667b41906e075bc574 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 80 94 1.0E-35 T 05-07-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 AC028_RS05960 6996c8d984b98d667b41906e075bc574 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 56 70 1.0E-35 T 05-07-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 AC028_RS05960 6996c8d984b98d667b41906e075bc574 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 44 56 1.0E-35 T 05-07-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 AC028_RS05960 6996c8d984b98d667b41906e075bc574 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 140 149 1.0E-35 T 05-07-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 AC028_RS05960 6996c8d984b98d667b41906e075bc574 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 115 134 1.0E-35 T 05-07-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 AC028_RS05960 6996c8d984b98d667b41906e075bc574 326 PRINTS PR00409 Phthalate dioxygenase reductase family signature 194 202 1.0E-35 T 05-07-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 AC028_RS05960 6996c8d984b98d667b41906e075bc574 326 Gene3D G3DSA:3.10.20.30 223 324 7.9E-26 T 05-07-2017 IPR012675 Beta-grasp domain AC028_RS05960 6996c8d984b98d667b41906e075bc574 326 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 275 283 - T 05-07-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AC028_RS05960 6996c8d984b98d667b41906e075bc574 326 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 248 316 3.2E-9 T 05-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AC028_RS05960 6996c8d984b98d667b41906e075bc574 326 SUPERFAMILY SSF63380 8 104 8.82E-25 T 05-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AC028_RS05960 6996c8d984b98d667b41906e075bc574 326 Gene3D G3DSA:2.40.30.10 5 104 6.0E-29 T 05-07-2017 AC028_RS05960 6996c8d984b98d667b41906e075bc574 326 SUPERFAMILY SSF54292 216 326 7.73E-28 T 05-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AC028_RS05960 6996c8d984b98d667b41906e075bc574 326 SUPERFAMILY SSF52343 102 231 7.46E-26 T 05-07-2017 AC028_RS11760 62daab23d1271f12095d2da269f76b2e 332 SUPERFAMILY SSF56553 53 177 2.35E-42 T 05-07-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11760 62daab23d1271f12095d2da269f76b2e 332 SUPERFAMILY SSF55257 9 53 1.96E-31 T 05-07-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11760 62daab23d1271f12095d2da269f76b2e 332 SUPERFAMILY SSF55257 178 232 1.96E-31 T 05-07-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11760 62daab23d1271f12095d2da269f76b2e 332 Gene3D G3DSA:3.30.1360.10 15 64 1.8E-10 T 05-07-2017 AC028_RS11760 62daab23d1271f12095d2da269f76b2e 332 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 227 1.6E-24 T 05-07-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11760 62daab23d1271f12095d2da269f76b2e 332 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 326 2.0E-35 T 05-07-2017 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11760 62daab23d1271f12095d2da269f76b2e 332 SUPERFAMILY SSF47789 250 323 1.83E-25 T 05-07-2017 AC028_RS11760 62daab23d1271f12095d2da269f76b2e 332 SMART SM00662 23 233 1.2E-106 T 05-07-2017 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11760 62daab23d1271f12095d2da269f76b2e 332 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 154 1.7E-24 T 05-07-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11760 62daab23d1271f12095d2da269f76b2e 332 Gene3D G3DSA:2.170.120.12 65 176 1.8E-40 T 05-07-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11760 62daab23d1271f12095d2da269f76b2e 332 Gene3D G3DSA:1.10.150.20 248 324 6.9E-35 T 05-07-2017 AC028_RS11760 62daab23d1271f12095d2da269f76b2e 332 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 315 4.2E-109 T 05-07-2017 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11760 62daab23d1271f12095d2da269f76b2e 332 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 316 34.74 T 05-07-2017 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11760 62daab23d1271f12095d2da269f76b2e 332 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 251 307 1.3E-23 T 05-07-2017 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS15905 9936bedab2a2e91bb6037ab183de9216 325 PIRSF PIRSF018266 7 325 2.8E-82 T 05-07-2017 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AC028_RS15905 9936bedab2a2e91bb6037ab183de9216 325 Pfam PF04773 FecR protein 115 210 1.4E-17 T 05-07-2017 IPR006860 FecR protein AC028_RS15905 9936bedab2a2e91bb6037ab183de9216 325 Pfam PF16220 Domain of unknown function (DUF4880) 18 59 3.1E-13 T 05-07-2017 IPR032623 FecR, N-terminal AC028_RS19105 f2793ba8b8da1b9be37fb1afdca81c61 362 SMART SM00382 29 212 5.0E-12 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS19105 f2793ba8b8da1b9be37fb1afdca81c61 362 SUPERFAMILY SSF52540 4 243 4.91E-82 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19105 f2793ba8b8da1b9be37fb1afdca81c61 362 Gene3D G3DSA:2.40.50.140 286 343 4.2E-16 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS19105 f2793ba8b8da1b9be37fb1afdca81c61 362 Pfam PF08402 TOBE domain 281 351 2.6E-9 T 05-07-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AC028_RS19105 f2793ba8b8da1b9be37fb1afdca81c61 362 Pfam PF00005 ABC transporter 21 162 9.1E-30 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS19105 f2793ba8b8da1b9be37fb1afdca81c61 362 Gene3D G3DSA:2.40.50.100 345 359 2.1E-9 T 05-07-2017 AC028_RS19105 f2793ba8b8da1b9be37fb1afdca81c61 362 Gene3D G3DSA:2.40.50.100 240 285 2.1E-9 T 05-07-2017 AC028_RS19105 f2793ba8b8da1b9be37fb1afdca81c61 362 SUPERFAMILY SSF50331 237 359 4.13E-30 T 05-07-2017 IPR008995 Molybdate/tungstate binding, C-terminal AC028_RS19105 f2793ba8b8da1b9be37fb1afdca81c61 362 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS19105 f2793ba8b8da1b9be37fb1afdca81c61 362 Gene3D G3DSA:3.40.50.300 4 235 1.5E-72 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS00280 5bd043d89d1c756979e3d04040a6d8ff 178 SUPERFAMILY SSF51261 49 169 3.71E-29 T 05-07-2017 IPR011055 Duplicated hybrid motif AC028_RS00280 5bd043d89d1c756979e3d04040a6d8ff 178 Pfam PF01551 Peptidase family M23 67 165 6.3E-20 T 05-07-2017 IPR016047 Peptidase M23 AC028_RS00280 5bd043d89d1c756979e3d04040a6d8ff 178 Gene3D G3DSA:2.70.70.10 30 171 4.2E-33 T 05-07-2017 AC028_RS07315 4044fcbef483aa9dc55bf8fd6893efc0 686 SMART SM00331 449 664 1.6E-41 T 05-07-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AC028_RS07315 4044fcbef483aa9dc55bf8fd6893efc0 686 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 477 664 4.0E-46 T 05-07-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AC028_RS07315 4044fcbef483aa9dc55bf8fd6893efc0 686 SUPERFAMILY SSF81606 461 664 1.73E-7 T 05-07-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AC028_RS07315 4044fcbef483aa9dc55bf8fd6893efc0 686 Gene3D G3DSA:3.30.450.20 155 225 1.1E-9 T 05-07-2017 AC028_RS07315 4044fcbef483aa9dc55bf8fd6893efc0 686 SUPERFAMILY SSF158472 359 410 4.71E-9 T 05-07-2017 AC028_RS07315 4044fcbef483aa9dc55bf8fd6893efc0 686 SMART SM00304 359 412 1.2E-9 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS07315 4044fcbef483aa9dc55bf8fd6893efc0 686 Pfam PF00672 HAMP domain 337 409 4.6E-12 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS07315 4044fcbef483aa9dc55bf8fd6893efc0 686 Pfam PF02743 Cache domain 67 321 2.2E-21 T 05-07-2017 IPR033479 Double Cache domain 1 AC028_RS07315 4044fcbef483aa9dc55bf8fd6893efc0 686 SUPERFAMILY SSF103190 156 236 2.31E-6 T 05-07-2017 IPR029151 Periplasmic sensor domain-like AC028_RS15620 18072d86b192d9741e4ba60803fdd47c 95 Pfam PF14542 GCN5-related N-acetyl-transferase 21 93 1.7E-27 T 05-07-2017 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase AC028_RS15620 18072d86b192d9741e4ba60803fdd47c 95 Gene3D G3DSA:3.40.630.30 7 95 2.0E-34 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS15620 18072d86b192d9741e4ba60803fdd47c 95 SUPERFAMILY SSF55729 7 94 1.66E-27 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS11015 b85c3947bffc1166d1b5bbbeef8e4497 334 SUPERFAMILY SSF53850 36 269 6.7E-46 T 05-07-2017 AC028_RS11015 b85c3947bffc1166d1b5bbbeef8e4497 334 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 39 321 9.2E-94 T 05-07-2017 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 AC028_RS11015 b85c3947bffc1166d1b5bbbeef8e4497 334 Pfam PF09084 NMT1/THI5 like 64 256 2.2E-20 T 05-07-2017 IPR015168 SsuA/THI5-like AC028_RS11015 b85c3947bffc1166d1b5bbbeef8e4497 334 Gene3D G3DSA:3.40.190.10 119 243 1.7E-24 T 05-07-2017 AC028_RS05985 85d0cfaba619947ba5c804d4ac1b27f1 295 Pfam PF03466 LysR substrate binding domain 87 292 3.2E-42 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS05985 85d0cfaba619947ba5c804d4ac1b27f1 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.3E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS05985 85d0cfaba619947ba5c804d4ac1b27f1 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.3E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS05985 85d0cfaba619947ba5c804d4ac1b27f1 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.3E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS05985 85d0cfaba619947ba5c804d4ac1b27f1 295 Gene3D G3DSA:3.40.190.10 178 265 1.5E-36 T 05-07-2017 AC028_RS05985 85d0cfaba619947ba5c804d4ac1b27f1 295 Gene3D G3DSA:3.40.190.10 88 177 1.1E-24 T 05-07-2017 AC028_RS05985 85d0cfaba619947ba5c804d4ac1b27f1 295 Gene3D G3DSA:1.10.10.10 1 86 2.8E-31 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS05985 85d0cfaba619947ba5c804d4ac1b27f1 295 SUPERFAMILY SSF53850 88 291 3.26E-36 T 05-07-2017 AC028_RS05985 85d0cfaba619947ba5c804d4ac1b27f1 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.8E-24 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS05985 85d0cfaba619947ba5c804d4ac1b27f1 295 SUPERFAMILY SSF46785 1 110 8.17E-25 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS07570 26eac33ff631e6405eb00cc8afd6cd17 647 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 22 79 2.5E-20 T 05-07-2017 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 AC028_RS07570 26eac33ff631e6405eb00cc8afd6cd17 647 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 19 642 0.0 T 05-07-2017 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 AC028_RS07570 26eac33ff631e6405eb00cc8afd6cd17 647 Gene3D G3DSA:3.40.50.980 77 265 7.2E-41 T 05-07-2017 AC028_RS07570 26eac33ff631e6405eb00cc8afd6cd17 647 Gene3D G3DSA:3.30.300.30 517 637 1.7E-28 T 05-07-2017 AC028_RS07570 26eac33ff631e6405eb00cc8afd6cd17 647 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 644 52.681 T 05-07-2017 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 AC028_RS07570 26eac33ff631e6405eb00cc8afd6cd17 647 SUPERFAMILY SSF56801 15 641 1.31E-182 T 05-07-2017 AC028_RS07570 26eac33ff631e6405eb00cc8afd6cd17 647 Gene3D G3DSA:3.40.50.980 266 423 8.2E-30 T 05-07-2017 AC028_RS07570 26eac33ff631e6405eb00cc8afd6cd17 647 Pfam PF00501 AMP-binding enzyme 81 521 5.8E-90 T 05-07-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AC028_RS07570 26eac33ff631e6405eb00cc8afd6cd17 647 Pfam PF13193 AMP-binding enzyme C-terminal domain 530 608 1.6E-25 T 05-07-2017 IPR025110 AMP-binding enzyme C-terminal domain AC028_RS07570 26eac33ff631e6405eb00cc8afd6cd17 647 ProSitePatterns PS00455 Putative AMP-binding domain signature. 260 271 - T 05-07-2017 IPR020845 AMP-binding, conserved site AC028_RS07570 26eac33ff631e6405eb00cc8afd6cd17 647 Gene3D G3DSA:2.30.38.10 439 514 1.0E-6 T 05-07-2017 AC028_RS21560 17fce7309768340b7ac96703d783c75d 486 Pfam PF00361 Proton-conducting membrane transporter 130 423 6.8E-75 T 05-07-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21560 17fce7309768340b7ac96703d783c75d 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 312 324 2.5E-7 T 05-07-2017 AC028_RS21560 17fce7309768340b7ac96703d783c75d 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 417 436 2.5E-7 T 05-07-2017 AC028_RS21560 17fce7309768340b7ac96703d783c75d 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 78 103 2.5E-7 T 05-07-2017 AC028_RS21560 17fce7309768340b7ac96703d783c75d 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 220 241 2.5E-7 T 05-07-2017 AC028_RS21560 17fce7309768340b7ac96703d783c75d 486 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 15 472 3.8E-139 T 05-07-2017 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AC028_RS21560 17fce7309768340b7ac96703d783c75d 486 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 12 475 17.915 T 05-07-2017 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AC028_RS03350 b3ef2bc97277902e08b73dfdcbd24060 157 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 16 147 1.4E-42 T 05-07-2017 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 AC028_RS03350 b3ef2bc97277902e08b73dfdcbd24060 157 Pfam PF00583 Acetyltransferase (GNAT) family 51 125 1.1E-13 T 05-07-2017 IPR000182 GNAT domain GO:0008080 AC028_RS03350 b3ef2bc97277902e08b73dfdcbd24060 157 Gene3D G3DSA:3.40.630.30 4 139 3.0E-36 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS03350 b3ef2bc97277902e08b73dfdcbd24060 157 SUPERFAMILY SSF55729 8 150 1.86E-36 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS11175 1b54d576b3c62d45b8fac217d8f0d6a2 214 Pfam PF00171 Aldehyde dehydrogenase family 25 173 1.8E-28 T 05-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AC028_RS11175 1b54d576b3c62d45b8fac217d8f0d6a2 214 Gene3D G3DSA:3.40.605.10 15 173 4.8E-37 T 05-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AC028_RS11175 1b54d576b3c62d45b8fac217d8f0d6a2 214 SUPERFAMILY SSF53720 16 174 7.85E-36 T 05-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AC028_RS21925 a00d10f494dacea52897bb3b2ec43f57 568 SMART SM00098 72 538 6.7E-152 T 05-07-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AC028_RS21925 a00d10f494dacea52897bb3b2ec43f57 568 Pfam PF00245 Alkaline phosphatase 71 533 1.5E-122 T 05-07-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AC028_RS21925 a00d10f494dacea52897bb3b2ec43f57 568 Gene3D G3DSA:3.40.720.10 61 534 7.7E-156 T 05-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AC028_RS21925 a00d10f494dacea52897bb3b2ec43f57 568 PRINTS PR00113 Alkaline phosphatase signature 127 142 1.3E-43 T 05-07-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AC028_RS21925 a00d10f494dacea52897bb3b2ec43f57 568 PRINTS PR00113 Alkaline phosphatase signature 173 193 1.3E-43 T 05-07-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AC028_RS21925 a00d10f494dacea52897bb3b2ec43f57 568 PRINTS PR00113 Alkaline phosphatase signature 71 91 1.3E-43 T 05-07-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AC028_RS21925 a00d10f494dacea52897bb3b2ec43f57 568 PRINTS PR00113 Alkaline phosphatase signature 236 246 1.3E-43 T 05-07-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AC028_RS21925 a00d10f494dacea52897bb3b2ec43f57 568 PRINTS PR00113 Alkaline phosphatase signature 324 353 1.3E-43 T 05-07-2017 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AC028_RS21925 a00d10f494dacea52897bb3b2ec43f57 568 SUPERFAMILY SSF53649 66 534 5.38E-143 T 05-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AC028_RS03490 fddf1d91ea2f816d094facf68c88fb69 664 Pfam PF11843 Protein of unknown function (DUF3363) 286 661 3.1E-142 T 05-07-2017 IPR021795 Protein of unknown function DUF3363 AC028_RS20345 ae4002142e922da314cd492403f70a4d 232 Gene3D G3DSA:3.40.30.10 2 85 2.5E-21 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS20345 ae4002142e922da314cd492403f70a4d 232 SUPERFAMILY SSF47616 89 221 2.09E-24 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS20345 ae4002142e922da314cd492403f70a4d 232 Pfam PF00043 Glutathione S-transferase, C-terminal domain 155 211 1.3E-8 T 05-07-2017 IPR004046 Glutathione S-transferase, C-terminal AC028_RS20345 ae4002142e922da314cd492403f70a4d 232 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 74 2.2E-15 T 05-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AC028_RS20345 ae4002142e922da314cd492403f70a4d 232 SUPERFAMILY SSF52833 1 81 1.1E-20 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS20345 ae4002142e922da314cd492403f70a4d 232 Gene3D G3DSA:1.20.1050.10 91 216 2.5E-25 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS00065 e462222db996e1e34e6faa141fd820de 285 PIRSF PIRSF006232 7 285 3.7E-98 T 05-07-2017 IPR012093 Pirin AC028_RS00065 e462222db996e1e34e6faa141fd820de 285 SUPERFAMILY SSF51182 10 285 2.23E-89 T 05-07-2017 IPR011051 RmlC-like cupin domain AC028_RS00065 e462222db996e1e34e6faa141fd820de 285 Gene3D G3DSA:2.60.120.10 10 259 2.3E-84 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS00065 e462222db996e1e34e6faa141fd820de 285 Pfam PF05726 Pirin C-terminal cupin domain 181 285 2.7E-30 T 05-07-2017 IPR008778 Pirin, C-terminal domain AC028_RS00065 e462222db996e1e34e6faa141fd820de 285 Pfam PF02678 Pirin 26 126 5.4E-38 T 05-07-2017 IPR003829 Pirin, N-terminal domain AC028_RS18155 0468cfb906de6af8645101a500b323f8 703 Pfam PF00672 HAMP domain 151 218 3.5E-11 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18155 0468cfb906de6af8645101a500b323f8 703 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 456 650 3.8E-60 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18155 0468cfb906de6af8645101a500b323f8 703 Pfam PF05227 CHASE3 domain 3 137 3.6E-31 T 05-07-2017 IPR007891 CHASE3 AC028_RS18155 0468cfb906de6af8645101a500b323f8 703 SUPERFAMILY SSF158472 170 220 2.48E-7 T 05-07-2017 AC028_RS18155 0468cfb906de6af8645101a500b323f8 703 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 425 454 2.1E-57 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18155 0468cfb906de6af8645101a500b323f8 703 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 531 560 2.1E-57 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18155 0468cfb906de6af8645101a500b323f8 703 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 579 608 2.1E-57 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18155 0468cfb906de6af8645101a500b323f8 703 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 502 529 2.1E-57 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS18155 0468cfb906de6af8645101a500b323f8 703 SMART SM00304 170 222 9.0E-7 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18155 0468cfb906de6af8645101a500b323f8 703 SMART SM00304 351 403 18.0 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18155 0468cfb906de6af8645101a500b323f8 703 SUPERFAMILY SSF58104 371 652 1.57E-69 T 05-07-2017 AC028_RS18155 0468cfb906de6af8645101a500b323f8 703 SMART SM00283 404 651 9.6E-90 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18155 0468cfb906de6af8645101a500b323f8 703 Gene3D G3DSA:1.10.287.950 419 623 4.5E-61 T 05-07-2017 AC028_RS20560 3edc3515bde428b3113811ac7898fee3 321 Pfam PF08279 HTH domain 7 62 2.6E-11 T 05-07-2017 IPR013196 Helix-turn-helix, type 11 AC028_RS20560 3edc3515bde428b3113811ac7898fee3 321 Gene3D G3DSA:1.10.10.10 5 66 8.0E-19 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS20560 3edc3515bde428b3113811ac7898fee3 321 SUPERFAMILY SSF46785 6 63 2.73E-10 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS20560 3edc3515bde428b3113811ac7898fee3 321 Pfam PF13280 WYL domain 142 310 3.0E-20 T 05-07-2017 IPR026881 WYL domain AC028_RS20090 29b801111a6c1895bd24d788972f1358 414 SUPERFAMILY SSF53720 6 413 1.44E-109 T 05-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AC028_RS20090 29b801111a6c1895bd24d788972f1358 414 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 401 3.9E-138 T 05-07-2017 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AC028_RS20090 29b801111a6c1895bd24d788972f1358 414 Gene3D G3DSA:3.40.309.10 224 371 4.5E-39 T 05-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AC028_RS20090 29b801111a6c1895bd24d788972f1358 414 Gene3D G3DSA:3.40.605.10 372 413 2.9E-96 T 05-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AC028_RS20090 29b801111a6c1895bd24d788972f1358 414 Gene3D G3DSA:3.40.605.10 2 221 2.9E-96 T 05-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AC028_RS20090 29b801111a6c1895bd24d788972f1358 414 PIRSF PIRSF000151 1 414 2.2E-173 T 05-07-2017 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AC028_RS20090 29b801111a6c1895bd24d788972f1358 414 Pfam PF00171 Aldehyde dehydrogenase family 10 284 2.9E-12 T 05-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AC028_RS20090 29b801111a6c1895bd24d788972f1358 414 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 320 341 - T 05-07-2017 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AC028_RS20090 29b801111a6c1895bd24d788972f1358 414 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 413 41.226 T 05-07-2017 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AC028_RS01845 4e047656e35bacb2dc5b3b43148b7b36 291 SUPERFAMILY SSF52210 125 290 4.45E-56 T 05-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AC028_RS01845 4e047656e35bacb2dc5b3b43148b7b36 291 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 154 183 - T 05-07-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AC028_RS01845 4e047656e35bacb2dc5b3b43148b7b36 291 SUPERFAMILY SSF51735 1 124 1.66E-43 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS01845 4e047656e35bacb2dc5b3b43148b7b36 291 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 238 251 - T 05-07-2017 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AC028_RS01845 4e047656e35bacb2dc5b3b43148b7b36 291 SMART SM00881 4 100 9.8E-38 T 05-07-2017 IPR003781 CoA-binding GO:0048037 AC028_RS01845 4e047656e35bacb2dc5b3b43148b7b36 291 Gene3D G3DSA:3.40.50.720 2 121 5.8E-56 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS01845 4e047656e35bacb2dc5b3b43148b7b36 291 Pfam PF02629 CoA binding domain 6 99 1.2E-30 T 05-07-2017 IPR003781 CoA-binding GO:0048037 AC028_RS01845 4e047656e35bacb2dc5b3b43148b7b36 291 PIRSF PIRSF001553 1 291 2.9E-130 T 05-07-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AC028_RS01845 4e047656e35bacb2dc5b3b43148b7b36 291 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 289 8.3E-139 T 05-07-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AC028_RS01845 4e047656e35bacb2dc5b3b43148b7b36 291 Pfam PF00549 CoA-ligase 153 273 6.6E-19 T 05-07-2017 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AC028_RS01845 4e047656e35bacb2dc5b3b43148b7b36 291 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 9.0E-37 T 05-07-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AC028_RS01845 4e047656e35bacb2dc5b3b43148b7b36 291 PRINTS PR01798 Succinyl-CoA synthase signature 242 259 9.0E-37 T 05-07-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AC028_RS01845 4e047656e35bacb2dc5b3b43148b7b36 291 PRINTS PR01798 Succinyl-CoA synthase signature 179 197 9.0E-37 T 05-07-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AC028_RS01845 4e047656e35bacb2dc5b3b43148b7b36 291 PRINTS PR01798 Succinyl-CoA synthase signature 210 223 9.0E-37 T 05-07-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 AC028_RS01845 4e047656e35bacb2dc5b3b43148b7b36 291 Gene3D G3DSA:3.40.50.261 122 288 5.7E-75 T 05-07-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AC028_RS22105 9be5af0bed70280b547ae868c44258c8 295 Pfam PF00892 EamA-like transporter family 26 148 8.1E-21 T 05-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AC028_RS22105 9be5af0bed70280b547ae868c44258c8 295 Pfam PF00892 EamA-like transporter family 161 290 7.6E-22 T 05-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AC028_RS22105 9be5af0bed70280b547ae868c44258c8 295 SUPERFAMILY SSF103481 195 293 2.75E-19 T 05-07-2017 AC028_RS22105 9be5af0bed70280b547ae868c44258c8 295 SUPERFAMILY SSF103481 51 151 3.92E-19 T 05-07-2017 AC028_RS16520 96d02a7ece6c09e837a8694e7473abad 236 SUPERFAMILY SSF109755 11 227 1.02E-64 T 05-07-2017 AC028_RS16520 96d02a7ece6c09e837a8694e7473abad 236 Gene3D G3DSA:1.20.58.220 6 114 1.3E-27 T 05-07-2017 AC028_RS16520 96d02a7ece6c09e837a8694e7473abad 236 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 11 219 6.6E-60 T 05-07-2017 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AC028_RS16520 96d02a7ece6c09e837a8694e7473abad 236 PIRSF PIRSF003107 6 223 2.9E-58 T 05-07-2017 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AC028_RS16520 96d02a7ece6c09e837a8694e7473abad 236 Pfam PF01895 PhoU domain 127 210 2.8E-17 T 05-07-2017 IPR026022 PhoU domain AC028_RS16520 96d02a7ece6c09e837a8694e7473abad 236 Pfam PF01895 PhoU domain 24 110 5.4E-19 T 05-07-2017 IPR026022 PhoU domain AC028_RS16520 96d02a7ece6c09e837a8694e7473abad 236 Gene3D G3DSA:1.20.58.220 126 220 6.0E-31 T 05-07-2017 AC028_RS17605 210f3c25ac0010b315e73d84bc49723c 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 135 3.1E-35 T 05-07-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AC028_RS17605 210f3c25ac0010b315e73d84bc49723c 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 90 101 - T 05-07-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AC028_RS17605 210f3c25ac0010b315e73d84bc49723c 161 SUPERFAMILY SSF55083 1 149 2.49E-50 T 05-07-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AC028_RS17605 210f3c25ac0010b315e73d84bc49723c 161 Gene3D G3DSA:3.30.70.560 3 153 5.5E-54 T 05-07-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AC028_RS17605 210f3c25ac0010b315e73d84bc49723c 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 135 3.5E-43 T 05-07-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AC028_RS13595 ed7c7bf3e1c9171f448a9b3bb167d81d 322 PRINTS PR01166 Cytochrome c oxidase subunit II signature 206 226 2.0E-42 T 05-07-2017 AC028_RS13595 ed7c7bf3e1c9171f448a9b3bb167d81d 322 PRINTS PR01166 Cytochrome c oxidase subunit II signature 96 108 2.0E-42 T 05-07-2017 AC028_RS13595 ed7c7bf3e1c9171f448a9b3bb167d81d 322 PRINTS PR01166 Cytochrome c oxidase subunit II signature 108 128 2.0E-42 T 05-07-2017 AC028_RS13595 ed7c7bf3e1c9171f448a9b3bb167d81d 322 PRINTS PR01166 Cytochrome c oxidase subunit II signature 130 149 2.0E-42 T 05-07-2017 AC028_RS13595 ed7c7bf3e1c9171f448a9b3bb167d81d 322 PRINTS PR01166 Cytochrome c oxidase subunit II signature 182 203 2.0E-42 T 05-07-2017 AC028_RS13595 ed7c7bf3e1c9171f448a9b3bb167d81d 322 PRINTS PR01166 Cytochrome c oxidase subunit II signature 226 243 2.0E-42 T 05-07-2017 AC028_RS13595 ed7c7bf3e1c9171f448a9b3bb167d81d 322 PRINTS PR01166 Cytochrome c oxidase subunit II signature 244 261 2.0E-42 T 05-07-2017 AC028_RS13595 ed7c7bf3e1c9171f448a9b3bb167d81d 322 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 51 271 1.5E-59 T 05-07-2017 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13595 ed7c7bf3e1c9171f448a9b3bb167d81d 322 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 134 261 1.0E-39 T 05-07-2017 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13595 ed7c7bf3e1c9171f448a9b3bb167d81d 322 Gene3D G3DSA:1.10.287.90 37 125 6.3E-23 T 05-07-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13595 ed7c7bf3e1c9171f448a9b3bb167d81d 322 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 207 255 - T 05-07-2017 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13595 ed7c7bf3e1c9171f448a9b3bb167d81d 322 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 36 118 8.5E-13 T 05-07-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13595 ed7c7bf3e1c9171f448a9b3bb167d81d 322 SUPERFAMILY SSF81464 36 128 4.74E-23 T 05-07-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13595 ed7c7bf3e1c9171f448a9b3bb167d81d 322 Gene3D G3DSA:2.60.40.420 126 278 1.5E-55 T 05-07-2017 IPR008972 Cupredoxin AC028_RS13595 ed7c7bf3e1c9171f448a9b3bb167d81d 322 SUPERFAMILY SSF49503 131 276 4.63E-53 T 05-07-2017 IPR008972 Cupredoxin AC028_RS12465 f5b3035f373e561be6862ca31ebbcdeb 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 32 62 - T 05-07-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AC028_RS12465 f5b3035f373e561be6862ca31ebbcdeb 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 65 4.3E-12 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS12465 f5b3035f373e561be6862ca31ebbcdeb 196 Gene3D G3DSA:1.10.357.10 80 190 6.8E-10 T 05-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AC028_RS12465 f5b3035f373e561be6862ca31ebbcdeb 196 Gene3D G3DSA:1.10.10.60 7 72 1.4E-21 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS12465 f5b3035f373e561be6862ca31ebbcdeb 196 SUPERFAMILY SSF46689 7 73 8.03E-15 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS12465 f5b3035f373e561be6862ca31ebbcdeb 196 SUPERFAMILY SSF48498 87 188 2.15E-11 T 05-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AC028_RS20075 c93c85689e318e2db4f0b035e76b55d9 421 SUPERFAMILY SSF103473 15 398 4.84E-42 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS20075 c93c85689e318e2db4f0b035e76b55d9 421 Gene3D G3DSA:1.20.1250.20 222 408 3.6E-14 T 05-07-2017 AC028_RS20075 c93c85689e318e2db4f0b035e76b55d9 421 Gene3D G3DSA:1.20.1250.20 21 198 5.0E-14 T 05-07-2017 AC028_RS20075 c93c85689e318e2db4f0b035e76b55d9 421 Pfam PF07690 Major Facilitator Superfamily 25 357 4.6E-16 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS16175 11a7b97a499279bfad83ba01de1f0583 141 Gene3D G3DSA:1.10.10.10 9 86 2.0E-29 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS16175 11a7b97a499279bfad83ba01de1f0583 141 Pfam PF01475 Ferric uptake regulator family 14 134 2.3E-42 T 05-07-2017 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AC028_RS16175 11a7b97a499279bfad83ba01de1f0583 141 SUPERFAMILY SSF46785 11 136 6.13E-38 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS05805 63814a6c41be6da66406b251c4af94e0 153 Pfam PF01047 MarR family 45 103 2.6E-15 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS05805 63814a6c41be6da66406b251c4af94e0 153 SMART SM00347 38 138 2.2E-20 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS05805 63814a6c41be6da66406b251c4af94e0 153 Gene3D G3DSA:1.10.10.10 9 150 2.6E-44 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS05805 63814a6c41be6da66406b251c4af94e0 153 SUPERFAMILY SSF46785 12 150 6.83E-35 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS05805 63814a6c41be6da66406b251c4af94e0 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 78 3.6E-7 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS05805 63814a6c41be6da66406b251c4af94e0 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 94 3.6E-7 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS05805 63814a6c41be6da66406b251c4af94e0 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 98 114 3.6E-7 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS16610 ff397896c2c705542dca67c0c193df92 163 Gene3D G3DSA:2.40.33.20 16 162 1.9E-39 T 05-07-2017 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like AC028_RS16610 ff397896c2c705542dca67c0c193df92 163 Pfam PF03473 MOSC domain 57 161 7.6E-7 T 05-07-2017 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AC028_RS16610 ff397896c2c705542dca67c0c193df92 163 SUPERFAMILY SSF50800 17 162 1.05E-37 T 05-07-2017 IPR011037 Pyruvate kinase-like, insert domain AC028_RS11120 28c5917435ed4f23e43c305bf1217b9c 402 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 6 389 5.8E-134 T 05-07-2017 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 AC028_RS11120 28c5917435ed4f23e43c305bf1217b9c 402 SUPERFAMILY SSF51905 5 179 2.35E-48 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS11120 28c5917435ed4f23e43c305bf1217b9c 402 SUPERFAMILY SSF51905 269 380 2.35E-48 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS11120 28c5917435ed4f23e43c305bf1217b9c 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 4.1E-20 T 05-07-2017 AC028_RS11120 28c5917435ed4f23e43c305bf1217b9c 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 4.1E-20 T 05-07-2017 AC028_RS11120 28c5917435ed4f23e43c305bf1217b9c 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 4.1E-20 T 05-07-2017 AC028_RS11120 28c5917435ed4f23e43c305bf1217b9c 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 4.1E-20 T 05-07-2017 AC028_RS11120 28c5917435ed4f23e43c305bf1217b9c 402 Pfam PF01494 FAD binding domain 6 339 1.4E-29 T 05-07-2017 IPR002938 FAD-binding domain GO:0071949 AC028_RS11120 28c5917435ed4f23e43c305bf1217b9c 402 Gene3D G3DSA:3.50.50.60 270 354 4.1E-34 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS11120 28c5917435ed4f23e43c305bf1217b9c 402 Gene3D G3DSA:3.50.50.60 5 184 4.1E-34 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS11120 28c5917435ed4f23e43c305bf1217b9c 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 389 4.2E-108 T 05-07-2017 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AC028_RS14765 d104492df076e195a431c871949584df 592 SUPERFAMILY SSF51230 3 97 1.44E-23 T 05-07-2017 IPR011053 Single hybrid motif AC028_RS14765 d104492df076e195a431c871949584df 592 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 151 180 - T 05-07-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AC028_RS14765 d104492df076e195a431c871949584df 592 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 05-07-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AC028_RS14765 d104492df076e195a431c871949584df 592 Gene3D G3DSA:4.10.320.10 284 331 9.4E-18 T 05-07-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AC028_RS14765 d104492df076e195a431c871949584df 592 Gene3D G3DSA:3.30.559.10 354 592 4.5E-86 T 05-07-2017 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 AC028_RS14765 d104492df076e195a431c871949584df 592 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 363 591 2.2E-80 T 05-07-2017 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AC028_RS14765 d104492df076e195a431c871949584df 592 SUPERFAMILY SSF47005 284 326 8.5E-11 T 05-07-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AC028_RS14765 d104492df076e195a431c871949584df 592 Gene3D G3DSA:2.40.50.100 6 81 2.6E-21 T 05-07-2017 AC028_RS14765 d104492df076e195a431c871949584df 592 Gene3D G3DSA:2.40.50.100 129 204 2.3E-21 T 05-07-2017 AC028_RS14765 d104492df076e195a431c871949584df 592 Pfam PF00364 Biotin-requiring enzyme 9 77 2.4E-20 T 05-07-2017 IPR000089 Biotin/lipoyl attachment AC028_RS14765 d104492df076e195a431c871949584df 592 Pfam PF00364 Biotin-requiring enzyme 131 200 5.0E-21 T 05-07-2017 IPR000089 Biotin/lipoyl attachment AC028_RS14765 d104492df076e195a431c871949584df 592 SUPERFAMILY SSF52777 352 592 2.09E-84 T 05-07-2017 AC028_RS14765 d104492df076e195a431c871949584df 592 Pfam PF02817 e3 binding domain 288 322 1.1E-13 T 05-07-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AC028_RS14765 d104492df076e195a431c871949584df 592 SUPERFAMILY SSF51230 128 218 1.57E-22 T 05-07-2017 IPR011053 Single hybrid motif AC028_RS09890 34ae0cc7b081bf63daa1534aa9a7d1f2 305 Gene3D G3DSA:1.10.150.130 4 107 8.0E-27 T 05-07-2017 IPR023109 Integrase/recombinase, N-terminal AC028_RS09890 34ae0cc7b081bf63daa1534aa9a7d1f2 305 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 6 300 3.6E-110 T 05-07-2017 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 AC028_RS09890 34ae0cc7b081bf63daa1534aa9a7d1f2 305 Gene3D G3DSA:1.10.443.10 115 297 1.2E-52 T 05-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AC028_RS09890 34ae0cc7b081bf63daa1534aa9a7d1f2 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 4 96 1.5E-17 T 05-07-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AC028_RS09890 34ae0cc7b081bf63daa1534aa9a7d1f2 305 Pfam PF00589 Phage integrase family 119 284 6.3E-47 T 05-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AC028_RS09890 34ae0cc7b081bf63daa1534aa9a7d1f2 305 SUPERFAMILY SSF56349 11 291 1.97E-53 T 05-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AC028_RS09890 34ae0cc7b081bf63daa1534aa9a7d1f2 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 2 298 58.931 T 05-07-2017 IPR023009 Tyrosine recombinase XerC/XerD AC028_RS05940 8cfeb283f5d2aa4702eb67fdbdf8633a 371 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 13 342 1.8E-42 T 05-07-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AC028_RS05940 8cfeb283f5d2aa4702eb67fdbdf8633a 371 Gene3D G3DSA:3.90.245.10 10 349 1.6E-68 T 05-07-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AC028_RS05940 8cfeb283f5d2aa4702eb67fdbdf8633a 371 SUPERFAMILY SSF53590 11 80 5.49E-59 T 05-07-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AC028_RS05940 8cfeb283f5d2aa4702eb67fdbdf8633a 371 SUPERFAMILY SSF53590 109 350 5.49E-59 T 05-07-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AC028_RS07025 fedd7b0d13a206c5f39bc3f142acd053 368 ProSitePatterns PS00618 RecF protein signature 2. 304 322 - T 05-07-2017 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AC028_RS07025 fedd7b0d13a206c5f39bc3f142acd053 368 ProSitePatterns PS00617 RecF protein signature 1. 121 141 - T 05-07-2017 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AC028_RS07025 fedd7b0d13a206c5f39bc3f142acd053 368 Gene3D G3DSA:3.40.50.300 1 175 2.3E-26 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07025 fedd7b0d13a206c5f39bc3f142acd053 368 Gene3D G3DSA:3.40.50.300 236 337 2.3E-26 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07025 fedd7b0d13a206c5f39bc3f142acd053 368 SUPERFAMILY SSF52540 1 337 2.45E-29 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07025 fedd7b0d13a206c5f39bc3f142acd053 368 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 361 3.6E-76 T 05-07-2017 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AC028_RS07025 fedd7b0d13a206c5f39bc3f142acd053 368 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 368 83.92 T 05-07-2017 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AC028_RS07025 fedd7b0d13a206c5f39bc3f142acd053 368 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 340 5.9E-17 T 05-07-2017 IPR003395 RecF/RecN/SMC, N-terminal AC028_RS18710 caaaa3a838ddac7ec51c305bb93ba699 378 Gene3D G3DSA:2.40.30.10 278 359 2.0E-31 T 05-07-2017 AC028_RS18710 caaaa3a838ddac7ec51c305bb93ba699 378 Pfam PF03054 tRNA methyl transferase 5 356 2.3E-126 T 05-07-2017 AC028_RS18710 caaaa3a838ddac7ec51c305bb93ba699 378 SUPERFAMILY SSF52402 2 291 1.15E-49 T 05-07-2017 AC028_RS18710 caaaa3a838ddac7ec51c305bb93ba699 378 Gene3D G3DSA:2.30.30.280 209 276 7.7E-26 T 05-07-2017 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 AC028_RS18710 caaaa3a838ddac7ec51c305bb93ba699 378 Gene3D G3DSA:3.40.50.620 2 207 8.6E-86 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS18710 caaaa3a838ddac7ec51c305bb93ba699 378 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 5 356 9.1E-126 T 05-07-2017 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 AC028_RS18710 caaaa3a838ddac7ec51c305bb93ba699 378 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 357 36.747 T 05-07-2017 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 AC028_RS18110 4284d22f64bdb1d756f8ba8fe91123e6 265 Pfam PF07238 PilZ domain 135 252 1.2E-12 T 05-07-2017 IPR009875 PilZ domain GO:0035438 AC028_RS18110 4284d22f64bdb1d756f8ba8fe91123e6 265 Gene3D G3DSA:2.30.110.10 27 135 7.2E-21 T 05-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 AC028_RS18110 4284d22f64bdb1d756f8ba8fe91123e6 265 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 22 261 30.18 T 05-07-2017 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 AC028_RS18110 4284d22f64bdb1d756f8ba8fe91123e6 265 Gene3D G3DSA:2.40.10.220 136 260 3.5E-14 T 05-07-2017 AC028_RS18110 4284d22f64bdb1d756f8ba8fe91123e6 265 Pfam PF07317 Flagellar regulator YcgR 27 132 8.0E-27 T 05-07-2017 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal AC028_RS18110 4284d22f64bdb1d756f8ba8fe91123e6 265 SUPERFAMILY SSF141371 131 241 1.51E-5 T 05-07-2017 AC028_RS06485 7885472430a729ca6cb1974f330d58ba 222 Hamap MF_01584 UPF0502 protein YceH [yceH]. 10 215 30.121 T 05-07-2017 IPR007432 Protein of unknown function DUF480 AC028_RS06485 7885472430a729ca6cb1974f330d58ba 222 Gene3D G3DSA:1.10.10.10 94 170 1.3E-31 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS06485 7885472430a729ca6cb1974f330d58ba 222 Gene3D G3DSA:1.10.10.10 2 92 2.3E-37 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS06485 7885472430a729ca6cb1974f330d58ba 222 Pfam PF04337 Protein of unknown function, DUF480 10 154 3.9E-54 T 05-07-2017 IPR007432 Protein of unknown function DUF480 AC028_RS06485 7885472430a729ca6cb1974f330d58ba 222 SUPERFAMILY SSF46785 8 87 2.27E-28 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS06485 7885472430a729ca6cb1974f330d58ba 222 SUPERFAMILY SSF46785 90 170 1.11E-26 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS12205 d38ab8e81479cdceed320b38de82f882 689 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 359 1.0E-23 T 05-07-2017 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AC028_RS12205 d38ab8e81479cdceed320b38de82f882 689 Gene3D G3DSA:1.20.272.10 243 358 9.6E-37 T 05-07-2017 AC028_RS12205 d38ab8e81479cdceed320b38de82f882 689 Gene3D G3DSA:1.10.8.60 167 242 3.4E-27 T 05-07-2017 AC028_RS12205 d38ab8e81479cdceed320b38de82f882 689 Gene3D G3DSA:3.40.50.300 15 166 8.1E-69 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12205 d38ab8e81479cdceed320b38de82f882 689 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 353 5.6E-125 T 05-07-2017 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AC028_RS12205 d38ab8e81479cdceed320b38de82f882 689 SUPERFAMILY SSF48019 243 360 2.04E-28 T 05-07-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AC028_RS12205 d38ab8e81479cdceed320b38de82f882 689 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.9E-5 T 05-07-2017 IPR001270 ClpA/B family GO:0005524 AC028_RS12205 d38ab8e81479cdceed320b38de82f882 689 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.9E-5 T 05-07-2017 IPR001270 ClpA/B family GO:0005524 AC028_RS12205 d38ab8e81479cdceed320b38de82f882 689 Pfam PF13177 DNA polymerase III, delta subunit 20 178 6.0E-45 T 05-07-2017 AC028_RS12205 d38ab8e81479cdceed320b38de82f882 689 SMART SM00382 37 188 1.8E-8 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS12205 d38ab8e81479cdceed320b38de82f882 689 SUPERFAMILY SSF52540 34 223 3.21E-58 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12205 d38ab8e81479cdceed320b38de82f882 689 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 564 684 7.4E-12 T 05-07-2017 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS07450 fa0b728299d54a639cda552170ce970e 551 SMART SM00564 133 165 8.7E-4 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS07450 fa0b728299d54a639cda552170ce970e 551 SMART SM00564 472 504 1.1E-5 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS07450 fa0b728299d54a639cda552170ce970e 551 SMART SM00564 353 389 210.0 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS07450 fa0b728299d54a639cda552170ce970e 551 SMART SM00564 404 454 27.0 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS07450 fa0b728299d54a639cda552170ce970e 551 SMART SM00564 178 224 7.5E-4 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS07450 fa0b728299d54a639cda552170ce970e 551 SMART SM00564 86 117 5.4E-4 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS07450 fa0b728299d54a639cda552170ce970e 551 SUPERFAMILY SSF50998 38 514 9.42E-80 T 05-07-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AC028_RS07450 fa0b728299d54a639cda552170ce970e 551 Pfam PF13360 PQQ-like domain 440 522 1.3E-9 T 05-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat AC028_RS07450 fa0b728299d54a639cda552170ce970e 551 Pfam PF13360 PQQ-like domain 73 222 7.3E-19 T 05-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat AC028_RS07450 fa0b728299d54a639cda552170ce970e 551 Gene3D G3DSA:2.140.10.10 38 531 3.5E-89 T 05-07-2017 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AC028_RS16225 5ba30584e4a271ad8b0d08459fcfa5b1 467 Pfam PF02321 Outer membrane efflux protein 283 457 9.7E-21 T 05-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AC028_RS16225 5ba30584e4a271ad8b0d08459fcfa5b1 467 Pfam PF02321 Outer membrane efflux protein 97 246 3.6E-9 T 05-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AC028_RS16225 5ba30584e4a271ad8b0d08459fcfa5b1 467 SUPERFAMILY SSF56954 98 457 2.88E-45 T 05-07-2017 AC028_RS16225 5ba30584e4a271ad8b0d08459fcfa5b1 467 SUPERFAMILY SSF56954 5 70 2.88E-45 T 05-07-2017 AC028_RS16225 5ba30584e4a271ad8b0d08459fcfa5b1 467 Gene3D G3DSA:1.20.1600.10 12 457 3.9E-30 T 05-07-2017 AC028_RS14840 8e52f36843897e4a03aeb5575a506a34 189 Gene3D G3DSA:1.20.59.10 37 113 1.6E-8 T 05-07-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AC028_RS14840 8e52f36843897e4a03aeb5575a506a34 189 SMART SM00830 29 107 6.1E-14 T 05-07-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AC028_RS14840 8e52f36843897e4a03aeb5575a506a34 189 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 31 143 1.6E-40 T 05-07-2017 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AC028_RS14840 8e52f36843897e4a03aeb5575a506a34 189 PIRSF PIRSF026640 4 189 2.5E-65 T 05-07-2017 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AC028_RS14840 8e52f36843897e4a03aeb5575a506a34 189 Pfam PF01817 Chorismate mutase type II 37 105 6.0E-7 T 05-07-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AC028_RS14840 8e52f36843897e4a03aeb5575a506a34 189 SUPERFAMILY SSF48600 37 188 2.44E-39 T 05-07-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AC028_RS08890 6ddad9758d2e1fc45aa0cf75c0aaffe1 926 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 174 7.1E-11 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS08890 6ddad9758d2e1fc45aa0cf75c0aaffe1 926 Gene3D G3DSA:2.170.130.10 67 179 1.8E-12 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS08890 6ddad9758d2e1fc45aa0cf75c0aaffe1 926 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 43 926 5.3E-251 T 05-07-2017 IPR010104 Bacterial TonB-dependent receptor AC028_RS08890 6ddad9758d2e1fc45aa0cf75c0aaffe1 926 Pfam PF00593 TonB dependent receptor 633 925 1.4E-31 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS08890 6ddad9758d2e1fc45aa0cf75c0aaffe1 926 SUPERFAMILY SSF56935 544 926 5.96E-96 T 05-07-2017 AC028_RS08890 6ddad9758d2e1fc45aa0cf75c0aaffe1 926 SUPERFAMILY SSF56935 284 335 5.96E-96 T 05-07-2017 AC028_RS08890 6ddad9758d2e1fc45aa0cf75c0aaffe1 926 SUPERFAMILY SSF56935 35 242 5.96E-96 T 05-07-2017 AC028_RS08890 6ddad9758d2e1fc45aa0cf75c0aaffe1 926 SUPERFAMILY SSF56935 364 503 5.96E-96 T 05-07-2017 AC028_RS08890 6ddad9758d2e1fc45aa0cf75c0aaffe1 926 Gene3D G3DSA:2.40.170.20 180 504 5.8E-69 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS08890 6ddad9758d2e1fc45aa0cf75c0aaffe1 926 Gene3D G3DSA:2.40.170.20 549 926 5.8E-69 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS04585 6e50c68876c67e248b46a0ac34e4f517 510 SUPERFAMILY SSF51011 366 494 6.11E-23 T 05-07-2017 AC028_RS04585 6e50c68876c67e248b46a0ac34e4f517 510 Gene3D G3DSA:3.20.20.80 46 371 6.3E-96 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS04585 6e50c68876c67e248b46a0ac34e4f517 510 SUPERFAMILY SSF51445 42 378 6.69E-84 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS04585 6e50c68876c67e248b46a0ac34e4f517 510 Gene3D G3DSA:2.60.40.1500 372 493 2.3E-11 T 05-07-2017 AC028_RS04585 6e50c68876c67e248b46a0ac34e4f517 510 ProSitePatterns PS01027 Glycosyl hydrolases family 39 active site. 173 182 - T 05-07-2017 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 AC028_RS04585 6e50c68876c67e248b46a0ac34e4f517 510 PRINTS PR00745 Glycosyl hydrolase family 39 signature 170 186 2.9E-16 T 05-07-2017 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 AC028_RS04585 6e50c68876c67e248b46a0ac34e4f517 510 PRINTS PR00745 Glycosyl hydrolase family 39 signature 232 246 2.9E-16 T 05-07-2017 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 AC028_RS04585 6e50c68876c67e248b46a0ac34e4f517 510 PRINTS PR00745 Glycosyl hydrolase family 39 signature 107 123 2.9E-16 T 05-07-2017 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 AC028_RS04585 6e50c68876c67e248b46a0ac34e4f517 510 PRINTS PR00745 Glycosyl hydrolase family 39 signature 153 170 2.9E-16 T 05-07-2017 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 AC028_RS04585 6e50c68876c67e248b46a0ac34e4f517 510 Pfam PF01229 Glycosyl hydrolases family 39 25 482 5.4E-90 T 05-07-2017 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 AC028_RS04045 3d4058ab18280f5f643f9afd2bb9ca5c 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 8.3E-46 T 05-07-2017 AC028_RS04045 3d4058ab18280f5f643f9afd2bb9ca5c 506 SMART SM00382 210 392 1.3E-6 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS04045 3d4058ab18280f5f643f9afd2bb9ca5c 506 SUPERFAMILY SSF52540 190 497 2.55E-45 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS04045 3d4058ab18280f5f643f9afd2bb9ca5c 506 SUPERFAMILY SSF54211 9 169 9.48E-32 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS04045 3d4058ab18280f5f643f9afd2bb9ca5c 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 1.7E-6 T 05-07-2017 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 AC028_RS04045 3d4058ab18280f5f643f9afd2bb9ca5c 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 1.7E-6 T 05-07-2017 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 AC028_RS04045 3d4058ab18280f5f643f9afd2bb9ca5c 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 1.7E-6 T 05-07-2017 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 AC028_RS04045 3d4058ab18280f5f643f9afd2bb9ca5c 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 341 353 1.7E-6 T 05-07-2017 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 AC028_RS04045 3d4058ab18280f5f643f9afd2bb9ca5c 506 Gene3D G3DSA:3.30.230.10 6 167 1.4E-26 T 05-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_RS04045 3d4058ab18280f5f643f9afd2bb9ca5c 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 394 2.4E-96 T 05-07-2017 IPR000523 Magnesium chelatase ChlI domain AC028_RS04045 3d4058ab18280f5f643f9afd2bb9ca5c 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 402 494 1.7E-29 T 05-07-2017 IPR025158 Mg chelatase-related protein, C-terminal domain AC028_RS04045 3d4058ab18280f5f643f9afd2bb9ca5c 506 Gene3D G3DSA:3.40.50.300 190 388 2.0E-47 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS04045 3d4058ab18280f5f643f9afd2bb9ca5c 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 494 1.1E-193 T 05-07-2017 IPR004482 Mg chelatase-related protein AC028_RS19075 542668833ebef24a36b520b1477fdd19 1028 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.5E-36 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS19075 542668833ebef24a36b520b1477fdd19 1028 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.5E-36 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS19075 542668833ebef24a36b520b1477fdd19 1028 PRINTS PR00702 Acriflavin resistance protein family signature 327 350 5.5E-36 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS19075 542668833ebef24a36b520b1477fdd19 1028 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 5.5E-36 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS19075 542668833ebef24a36b520b1477fdd19 1028 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 5.5E-36 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS19075 542668833ebef24a36b520b1477fdd19 1028 PRINTS PR00702 Acriflavin resistance protein family signature 354 375 5.5E-36 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS19075 542668833ebef24a36b520b1477fdd19 1028 Gene3D G3DSA:1.20.1640.10 295 490 8.1E-44 T 05-07-2017 AC028_RS19075 542668833ebef24a36b520b1477fdd19 1028 SUPERFAMILY SSF82866 292 487 7.32E-34 T 05-07-2017 AC028_RS19075 542668833ebef24a36b520b1477fdd19 1028 Gene3D G3DSA:3.30.2090.10 691 774 1.6E-13 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS19075 542668833ebef24a36b520b1477fdd19 1028 Gene3D G3DSA:3.30.2090.10 184 261 2.7E-11 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS19075 542668833ebef24a36b520b1477fdd19 1028 Pfam PF00873 AcrB/AcrD/AcrF family 4 999 6.7E-197 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS19075 542668833ebef24a36b520b1477fdd19 1028 Gene3D G3DSA:3.30.70.1430 41 140 1.5E-18 T 05-07-2017 AC028_RS19075 542668833ebef24a36b520b1477fdd19 1028 SUPERFAMILY SSF82714 692 774 3.01E-14 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS19075 542668833ebef24a36b520b1477fdd19 1028 SUPERFAMILY SSF82693 40 135 1.99E-17 T 05-07-2017 AC028_RS19075 542668833ebef24a36b520b1477fdd19 1028 Gene3D G3DSA:1.10.3850.10 782 1000 5.5E-53 T 05-07-2017 AC028_RS19075 542668833ebef24a36b520b1477fdd19 1028 SUPERFAMILY SSF82866 776 1001 6.67E-47 T 05-07-2017 AC028_RS19075 542668833ebef24a36b520b1477fdd19 1028 SUPERFAMILY SSF82714 183 260 2.62E-10 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS19075 542668833ebef24a36b520b1477fdd19 1028 Gene3D G3DSA:3.30.70.1320 148 178 5.2E-9 T 05-07-2017 AC028_RS19075 542668833ebef24a36b520b1477fdd19 1028 Gene3D G3DSA:3.30.70.1320 266 294 5.2E-9 T 05-07-2017 AC028_RS19075 542668833ebef24a36b520b1477fdd19 1028 SUPERFAMILY SSF82693 146 181 2.04E-10 T 05-07-2017 AC028_RS19075 542668833ebef24a36b520b1477fdd19 1028 SUPERFAMILY SSF82693 264 306 2.04E-10 T 05-07-2017 AC028_RS02850 9073d676d971cc22d9d1110d7933fb4e 569 Pfam PF01019 Gamma-glutamyltranspeptidase 56 564 4.9E-161 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS02850 9073d676d971cc22d9d1110d7933fb4e 569 SUPERFAMILY SSF56235 30 569 9.65E-179 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS02850 9073d676d971cc22d9d1110d7933fb4e 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 250 266 1.1E-44 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS02850 9073d676d971cc22d9d1110d7933fb4e 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 377 395 1.1E-44 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS02850 9073d676d971cc22d9d1110d7933fb4e 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 432 447 1.1E-44 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS02850 9073d676d971cc22d9d1110d7933fb4e 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 456 473 1.1E-44 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS02850 9073d676d971cc22d9d1110d7933fb4e 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 63 88 1.1E-44 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS02850 9073d676d971cc22d9d1110d7933fb4e 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 401 419 1.1E-44 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS02850 9073d676d971cc22d9d1110d7933fb4e 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 152 171 1.1E-44 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS02850 9073d676d971cc22d9d1110d7933fb4e 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 134 152 1.1E-44 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS02850 9073d676d971cc22d9d1110d7933fb4e 569 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 279 298 1.1E-44 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS02850 9073d676d971cc22d9d1110d7933fb4e 569 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 42 561 1.3E-118 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS15520 af3f32d7b55bc113eea4419ffdc1b72b 118 Gene3D G3DSA:3.40.30.10 3 115 5.0E-34 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS15520 af3f32d7b55bc113eea4419ffdc1b72b 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 113 8.3E-28 T 05-07-2017 IPR006504 Transcriptional regulator Spx/MgsR AC028_RS15520 af3f32d7b55bc113eea4419ffdc1b72b 118 Pfam PF03960 ArsC family 5 113 4.3E-14 T 05-07-2017 IPR006660 Arsenate reductase-like AC028_RS15520 af3f32d7b55bc113eea4419ffdc1b72b 118 SUPERFAMILY SSF52833 3 115 1.71E-28 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS01405 0b1290754095d5f523797cd135b81365 346 Gene3D G3DSA:3.30.1150.10 231 345 2.1E-20 T 05-07-2017 AC028_RS01405 0b1290754095d5f523797cd135b81365 346 TIGRFAM TIGR02794 tolA_full: protein TolA 18 340 7.9E-45 T 05-07-2017 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 AC028_RS01405 0b1290754095d5f523797cd135b81365 346 Pfam PF13103 TonB C terminal 257 341 3.3E-8 T 05-07-2017 IPR006260 TonB, C-terminal GO:0006810 AC028_RS01405 0b1290754095d5f523797cd135b81365 346 SUPERFAMILY SSF74653 234 344 8.44E-13 T 05-07-2017 AC028_RS01360 a8daf1657f74a64e33743aa5c14f31b4 300 Pfam PF03466 LysR substrate binding domain 93 288 5.1E-15 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS01360 a8daf1657f74a64e33743aa5c14f31b4 300 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 295 7.5E-116 T 05-07-2017 IPR017685 HTH-type transcriptional regulator ArgP AC028_RS01360 a8daf1657f74a64e33743aa5c14f31b4 300 SUPERFAMILY SSF46785 6 113 9.12E-19 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS01360 a8daf1657f74a64e33743aa5c14f31b4 300 SUPERFAMILY SSF53850 94 293 9.77E-22 T 05-07-2017 AC028_RS01360 a8daf1657f74a64e33743aa5c14f31b4 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 3.3E-18 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS01360 a8daf1657f74a64e33743aa5c14f31b4 300 Gene3D G3DSA:3.40.190.10 94 200 5.8E-42 T 05-07-2017 AC028_RS01360 a8daf1657f74a64e33743aa5c14f31b4 300 Gene3D G3DSA:1.10.10.10 7 78 8.0E-20 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS00790 e605a92130045777dffdbc1327dfd90c 84 SUPERFAMILY SSF142921 4 73 2.35E-6 T 05-07-2017 IPR008893 WGR domain AC028_RS10840 d37aa4cb25f20f49f140f10081885234 275 Gene3D G3DSA:3.40.50.150 31 236 8.8E-33 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS10840 d37aa4cb25f20f49f140f10081885234 275 SUPERFAMILY SSF53335 19 229 9.67E-37 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS10840 d37aa4cb25f20f49f140f10081885234 275 Pfam PF08241 Methyltransferase domain 46 142 2.1E-20 T 05-07-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AC028_RS19250 a4dabb11adfd45018b56cf3be4209c1a 430 Gene3D G3DSA:3.40.50.720 12 228 6.9E-52 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS19250 a4dabb11adfd45018b56cf3be4209c1a 430 SMART SM00984 323 423 6.2E-35 T 05-07-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AC028_RS19250 a4dabb11adfd45018b56cf3be4209c1a 430 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 13 418 7.4E-113 T 05-07-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AC028_RS19250 a4dabb11adfd45018b56cf3be4209c1a 430 Gene3D G3DSA:3.40.50.720 238 426 9.0E-40 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS19250 a4dabb11adfd45018b56cf3be4209c1a 430 PIRSF PIRSF500136 4 430 2.0E-145 T 05-07-2017 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 AC028_RS19250 a4dabb11adfd45018b56cf3be4209c1a 430 SUPERFAMILY SSF52413 314 426 5.62E-26 T 05-07-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AC028_RS19250 a4dabb11adfd45018b56cf3be4209c1a 430 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 208 296 5.0E-24 T 05-07-2017 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AC028_RS19250 a4dabb11adfd45018b56cf3be4209c1a 430 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 13 186 1.0E-30 T 05-07-2017 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AC028_RS19250 a4dabb11adfd45018b56cf3be4209c1a 430 SUPERFAMILY SSF51735 13 197 2.46E-43 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS19250 a4dabb11adfd45018b56cf3be4209c1a 430 SUPERFAMILY SSF48179 207 297 1.39E-25 T 05-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AC028_RS19250 a4dabb11adfd45018b56cf3be4209c1a 430 PIRSF PIRSF000124 12 429 1.5E-49 T 05-07-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AC028_RS19250 a4dabb11adfd45018b56cf3be4209c1a 430 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 323 421 2.8E-20 T 05-07-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AC028_RS20140 290e1797baaef3e4b4f2e5cfcb268db2 341 Gene3D G3DSA:3.40.50.1370 159 321 7.2E-48 T 05-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AC028_RS20140 290e1797baaef3e4b4f2e5cfcb268db2 341 PRINTS PR00101 Aspartate carbamoyltransferase signature 35 57 2.1E-10 T 05-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AC028_RS20140 290e1797baaef3e4b4f2e5cfcb268db2 341 PRINTS PR00101 Aspartate carbamoyltransferase signature 147 164 2.1E-10 T 05-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AC028_RS20140 290e1797baaef3e4b4f2e5cfcb268db2 341 PRINTS PR00101 Aspartate carbamoyltransferase signature 315 329 2.1E-10 T 05-07-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AC028_RS20140 290e1797baaef3e4b4f2e5cfcb268db2 341 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 170 332 1.6E-33 T 05-07-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AC028_RS20140 290e1797baaef3e4b4f2e5cfcb268db2 341 SUPERFAMILY SSF53671 2 335 8.8E-74 T 05-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AC028_RS20140 290e1797baaef3e4b4f2e5cfcb268db2 341 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 299 322 7.7E-13 T 05-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AC028_RS20140 290e1797baaef3e4b4f2e5cfcb268db2 341 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 287 296 7.7E-13 T 05-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AC028_RS20140 290e1797baaef3e4b4f2e5cfcb268db2 341 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 45 64 7.7E-13 T 05-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AC028_RS20140 290e1797baaef3e4b4f2e5cfcb268db2 341 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 161 2.0E-35 T 05-07-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AC028_RS20140 290e1797baaef3e4b4f2e5cfcb268db2 341 Gene3D G3DSA:3.40.50.1370 4 158 1.2E-50 T 05-07-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AC028_RS13500 83397b2487ca6d23f8dff21e2a1c6d68 102 Pfam PF11731 Pathogenicity locus 8 91 3.1E-31 T 05-07-2017 IPR021725 Pathogenicity locus AC028_RS13500 83397b2487ca6d23f8dff21e2a1c6d68 102 Gene3D G3DSA:1.10.150.20 13 96 5.0E-22 T 05-07-2017 AC028_RS02530 caba4ffe4664320dbc3bc5e8ef5157be 451 SUPERFAMILY SSF51604 145 421 3.7E-82 T 05-07-2017 IPR029065 Enolase C-terminal domain-like AC028_RS02530 caba4ffe4664320dbc3bc5e8ef5157be 451 Gene3D G3DSA:3.30.390.10 15 123 1.8E-9 T 05-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS02530 caba4ffe4664320dbc3bc5e8ef5157be 451 Gene3D G3DSA:3.20.20.120 190 403 3.0E-102 T 05-07-2017 IPR029065 Enolase C-terminal domain-like AC028_RS02530 caba4ffe4664320dbc3bc5e8ef5157be 451 Gene3D G3DSA:3.20.20.120 124 158 3.0E-102 T 05-07-2017 IPR029065 Enolase C-terminal domain-like AC028_RS02530 caba4ffe4664320dbc3bc5e8ef5157be 451 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 12 451 2.2E-261 T 05-07-2017 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499 AC028_RS02530 caba4ffe4664320dbc3bc5e8ef5157be 451 SUPERFAMILY SSF54826 13 143 7.41E-32 T 05-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS02530 caba4ffe4664320dbc3bc5e8ef5157be 451 Pfam PF13378 Enolase C-terminal domain-like 195 410 1.7E-36 T 05-07-2017 IPR029065 Enolase C-terminal domain-like AC028_RS02530 caba4ffe4664320dbc3bc5e8ef5157be 451 SMART SM00922 191 291 6.4E-17 T 05-07-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AC028_RS16870 2369075b21ea7280f17242f910c0f071 285 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 6 272 1.4E-130 T 05-07-2017 IPR010247 N-formylglutamate deformylase AC028_RS16870 2369075b21ea7280f17242f910c0f071 285 SUPERFAMILY SSF53187 5 269 5.65E-79 T 05-07-2017 AC028_RS16870 2369075b21ea7280f17242f910c0f071 285 Pfam PF05013 N-formylglutamate amidohydrolase 15 233 4.9E-68 T 05-07-2017 IPR007709 N-formylglutamate amidohydrolase AC028_RS16870 2369075b21ea7280f17242f910c0f071 285 Gene3D G3DSA:3.40.630.40 2 271 5.3E-93 T 05-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AC028_RS12985 8b039095c9d05db78d9f4bcd43941dc9 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-17 T 05-07-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS12985 8b039095c9d05db78d9f4bcd43941dc9 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.843 T 05-07-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS12985 8b039095c9d05db78d9f4bcd43941dc9 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 05-07-2017 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS12985 8b039095c9d05db78d9f4bcd43941dc9 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.6E-37 T 05-07-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS12985 8b039095c9d05db78d9f4bcd43941dc9 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.6E-37 T 05-07-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS12985 8b039095c9d05db78d9f4bcd43941dc9 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.6E-37 T 05-07-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS12985 8b039095c9d05db78d9f4bcd43941dc9 86 Gene3D G3DSA:2.40.50.100 20 82 2.2E-29 T 05-07-2017 AC028_RS12985 8b039095c9d05db78d9f4bcd43941dc9 86 SUPERFAMILY SSF110324 2 82 3.42E-33 T 05-07-2017 AC028_RS12985 8b039095c9d05db78d9f4bcd43941dc9 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 8.7E-37 T 05-07-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS12985 8b039095c9d05db78d9f4bcd43941dc9 86 Pfam PF01016 Ribosomal L27 protein 2 82 2.1E-37 T 05-07-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS01545 1cbda2a365a782157e06ff8e26dac512 131 Gene3D G3DSA:3.10.180.10 2 117 1.3E-29 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS01545 1cbda2a365a782157e06ff8e26dac512 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 113 1.3E-11 T 05-07-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AC028_RS01545 1cbda2a365a782157e06ff8e26dac512 131 SUPERFAMILY SSF54593 2 119 5.37E-22 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS00445 89a5be52036b7478b3dbeb8490dce540 222 SUPERFAMILY SSF53328 8 203 9.81E-58 T 05-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AC028_RS00445 89a5be52036b7478b3dbeb8490dce540 222 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 9 192 28.099 T 05-07-2017 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AC028_RS00445 89a5be52036b7478b3dbeb8490dce540 222 Gene3D G3DSA:3.40.50.170 8 198 7.5E-61 T 05-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AC028_RS00445 89a5be52036b7478b3dbeb8490dce540 222 Pfam PF00551 Formyl transferase 9 184 4.9E-51 T 05-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AC028_RS00445 89a5be52036b7478b3dbeb8490dce540 222 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 9 195 5.0E-63 T 05-07-2017 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AC028_RS10675 a373a069078c8cdb14a9536bdaf50d02 313 SUPERFAMILY SSF51261 81 301 3.03E-58 T 05-07-2017 IPR011055 Duplicated hybrid motif AC028_RS10675 a373a069078c8cdb14a9536bdaf50d02 313 Gene3D G3DSA:2.70.70.10 165 302 2.8E-50 T 05-07-2017 AC028_RS10675 a373a069078c8cdb14a9536bdaf50d02 313 Pfam PF01551 Peptidase family M23 203 297 2.7E-32 T 05-07-2017 IPR016047 Peptidase M23 AC028_RS13640 72d95c3984d8322ac35a2e67d0dd73ad 298 Pfam PF01040 UbiA prenyltransferase family 21 266 9.4E-55 T 05-07-2017 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 AC028_RS13640 72d95c3984d8322ac35a2e67d0dd73ad 298 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 62 84 - T 05-07-2017 IPR030470 UbiA prenyltransferase conserved site AC028_RS13640 72d95c3984d8322ac35a2e67d0dd73ad 298 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 4 292 19.304 T 05-07-2017 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AC028_RS13640 72d95c3984d8322ac35a2e67d0dd73ad 298 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 6 291 7.9E-88 T 05-07-2017 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AC028_RS05885 7f1f221c3adf303dc202577c48c82d60 473 Gene3D G3DSA:3.50.50.60 180 267 4.4E-8 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS05885 7f1f221c3adf303dc202577c48c82d60 473 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 39 252 1.5E-15 T 05-07-2017 AC028_RS05885 7f1f221c3adf303dc202577c48c82d60 473 Gene3D G3DSA:3.50.50.60 295 389 3.3E-6 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS05885 7f1f221c3adf303dc202577c48c82d60 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 4.6E-6 T 05-07-2017 AC028_RS05885 7f1f221c3adf303dc202577c48c82d60 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 218 236 4.6E-6 T 05-07-2017 AC028_RS05885 7f1f221c3adf303dc202577c48c82d60 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 38 57 4.6E-6 T 05-07-2017 AC028_RS05885 7f1f221c3adf303dc202577c48c82d60 473 SUPERFAMILY SSF51905 36 80 1.03E-29 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS05885 7f1f221c3adf303dc202577c48c82d60 473 SUPERFAMILY SSF51905 111 388 1.03E-29 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS05885 7f1f221c3adf303dc202577c48c82d60 473 Gene3D G3DSA:3.50.50.60 35 179 7.9E-15 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS20875 1d7b4f79343161efefbae61b09700f10 356 Pfam PF02547 Queuosine biosynthesis protein 4 344 1.2E-129 T 05-07-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AC028_RS20875 1d7b4f79343161efefbae61b09700f10 356 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3 344 2.0E-128 T 05-07-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AC028_RS20875 1d7b4f79343161efefbae61b09700f10 356 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 345 46.236 T 05-07-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AC028_RS20875 1d7b4f79343161efefbae61b09700f10 356 SUPERFAMILY SSF111337 2 344 1.83E-130 T 05-07-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AC028_RS20875 1d7b4f79343161efefbae61b09700f10 356 Gene3D G3DSA:2.40.10.240 64 139 5.8E-13 T 05-07-2017 AC028_RS20875 1d7b4f79343161efefbae61b09700f10 356 Gene3D G3DSA:3.40.1780.10 2 62 4.1E-98 T 05-07-2017 AC028_RS20875 1d7b4f79343161efefbae61b09700f10 356 Gene3D G3DSA:3.40.1780.10 177 344 4.1E-98 T 05-07-2017 AC028_RS17465 76bd7502d25054ea69985174cca286f3 116 Pfam PF06877 Regulator of ribonuclease activity B 9 113 2.2E-19 T 05-07-2017 IPR009671 Regulator of ribonuclease activity B domain AC028_RS17465 76bd7502d25054ea69985174cca286f3 116 SUPERFAMILY SSF89946 22 110 6.54E-6 T 05-07-2017 IPR009671 Regulator of ribonuclease activity B domain AC028_RS17465 76bd7502d25054ea69985174cca286f3 116 Gene3D G3DSA:3.30.70.970 27 110 1.9E-5 T 05-07-2017 IPR009671 Regulator of ribonuclease activity B domain AC028_RS12640 b5b27546c8dd9c8086e4568cb90d9560 212 Pfam PF13328 HD domain 11 166 1.0E-29 T 05-07-2017 IPR003607 HD/PDEase domain AC028_RS12640 b5b27546c8dd9c8086e4568cb90d9560 212 SMART SM00471 27 148 0.0011 T 05-07-2017 IPR003607 HD/PDEase domain AC028_RS12640 b5b27546c8dd9c8086e4568cb90d9560 212 SUPERFAMILY SSF109604 5 175 4.4E-33 T 05-07-2017 AC028_RS09695 3cafbf446df39e487ac0ad6d8bca2ff7 458 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 05-07-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AC028_RS09695 3cafbf446df39e487ac0ad6d8bca2ff7 458 Pfam PF00324 Amino acid permease 18 454 5.8E-115 T 05-07-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AC028_RS09695 3cafbf446df39e487ac0ad6d8bca2ff7 458 PIRSF PIRSF006060 1 455 2.5E-71 T 05-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AC028_RS04980 acd60ac93c0ee256e8a2399688835be5 961 SMART SM00965 48 99 1.5E-8 T 05-07-2017 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AC028_RS04980 acd60ac93c0ee256e8a2399688835be5 961 Gene3D G3DSA:2.170.130.10 151 261 3.7E-20 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS04980 acd60ac93c0ee256e8a2399688835be5 961 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 128 961 3.9E-229 T 05-07-2017 IPR010104 Bacterial TonB-dependent receptor AC028_RS04980 acd60ac93c0ee256e8a2399688835be5 961 SUPERFAMILY SSF56935 120 325 7.33E-89 T 05-07-2017 AC028_RS04980 acd60ac93c0ee256e8a2399688835be5 961 SUPERFAMILY SSF56935 619 961 7.33E-89 T 05-07-2017 AC028_RS04980 acd60ac93c0ee256e8a2399688835be5 961 SUPERFAMILY SSF56935 358 566 7.33E-89 T 05-07-2017 AC028_RS04980 acd60ac93c0ee256e8a2399688835be5 961 Pfam PF00593 TonB dependent receptor 695 959 1.7E-31 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS04980 acd60ac93c0ee256e8a2399688835be5 961 Gene3D G3DSA:2.40.170.20 611 961 6.8E-63 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS04980 acd60ac93c0ee256e8a2399688835be5 961 Gene3D G3DSA:2.40.170.20 262 324 6.8E-63 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS04980 acd60ac93c0ee256e8a2399688835be5 961 Gene3D G3DSA:2.40.170.20 505 565 6.8E-63 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS04980 acd60ac93c0ee256e8a2399688835be5 961 Gene3D G3DSA:2.40.170.20 357 469 6.8E-63 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS04980 acd60ac93c0ee256e8a2399688835be5 961 Pfam PF07715 TonB-dependent Receptor Plug Domain 151 259 5.1E-15 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS04980 acd60ac93c0ee256e8a2399688835be5 961 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 944 961 - T 05-07-2017 IPR010917 TonB-dependent receptor, conserved site AC028_RS17775 d436ec78e476f67def5283b94ec3cfff 247 Pfam PF13645 L,D-transpeptidase catalytic domain 50 219 2.9E-65 T 05-07-2017 IPR032676 Putative L,D-transpeptidase catalytic domain AC028_RS15695 970e5be04b6a3c29862023c8cb4292b3 142 Gene3D G3DSA:1.20.120.10 90 142 4.3E-5 T 05-07-2017 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AC028_RS15695 970e5be04b6a3c29862023c8cb4292b3 142 SUPERFAMILY SSF47175 31 142 3.68E-17 T 05-07-2017 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AC028_RS10495 52156557acfb2ed150c1efb4c741484d 156 Gene3D G3DSA:1.10.940.10 21 151 1.6E-43 T 05-07-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AC028_RS10495 52156557acfb2ed150c1efb4c741484d 156 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 19 150 23.37 T 05-07-2017 IPR011605 NusB antitermination factor GO:0006353 AC028_RS10495 52156557acfb2ed150c1efb4c741484d 156 Pfam PF01029 NusB family 23 146 1.2E-33 T 05-07-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AC028_RS10495 52156557acfb2ed150c1efb4c741484d 156 SUPERFAMILY SSF48013 19 150 8.5E-41 T 05-07-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AC028_RS10495 52156557acfb2ed150c1efb4c741484d 156 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 21 147 9.4E-43 T 05-07-2017 IPR011605 NusB antitermination factor GO:0006353 AC028_RS12910 55ec8bf14be48ac26b4fd6086eac45cd 60 SUPERFAMILY SSF47598 1 54 2.39E-10 T 05-07-2017 IPR010985 Ribbon-helix-helix GO:0006355 AC028_RS12910 55ec8bf14be48ac26b4fd6086eac45cd 60 Gene3D G3DSA:1.10.1220.10 6 48 3.9E-7 T 05-07-2017 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AC028_RS05405 2ea902f1f9814f8301796646491b8a85 421 SUPERFAMILY SSF48452 248 383 4.88E-5 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS05405 2ea902f1f9814f8301796646491b8a85 421 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 6 379 8.8E-47 T 05-07-2017 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 AC028_RS05405 2ea902f1f9814f8301796646491b8a85 421 Gene3D G3DSA:1.25.40.10 301 384 2.6E-7 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS05405 2ea902f1f9814f8301796646491b8a85 421 Pfam PF07219 HemY protein N-terminus 33 132 2.0E-17 T 05-07-2017 IPR010817 HemY, N-terminal AC028_RS20735 6a5dc41e03cf7cf854f4f78276642dc8 417 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 259 296 - T 05-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AC028_RS20735 6a5dc41e03cf7cf854f4f78276642dc8 417 Pfam PF00202 Aminotransferase class-III 29 411 7.6E-104 T 05-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AC028_RS20735 6a5dc41e03cf7cf854f4f78276642dc8 417 Gene3D G3DSA:3.40.640.10 72 349 3.9E-85 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS20735 6a5dc41e03cf7cf854f4f78276642dc8 417 Gene3D G3DSA:3.90.1150.10 351 415 1.6E-29 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS20735 6a5dc41e03cf7cf854f4f78276642dc8 417 Gene3D G3DSA:3.90.1150.10 19 71 1.6E-29 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS20735 6a5dc41e03cf7cf854f4f78276642dc8 417 SUPERFAMILY SSF53383 22 409 3.38E-112 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS21085 986e24777a78bf496698bded60dbaa43 446 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 111 119 2.7E-15 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS21085 986e24777a78bf496698bded60dbaa43 446 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 290 308 2.7E-15 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS21085 986e24777a78bf496698bded60dbaa43 446 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 16 38 2.7E-15 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS21085 986e24777a78bf496698bded60dbaa43 446 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 150 174 2.7E-15 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS21085 986e24777a78bf496698bded60dbaa43 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 4.6E-23 T 05-07-2017 AC028_RS21085 986e24777a78bf496698bded60dbaa43 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 250 266 4.6E-23 T 05-07-2017 AC028_RS21085 986e24777a78bf496698bded60dbaa43 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 110 128 4.6E-23 T 05-07-2017 AC028_RS21085 986e24777a78bf496698bded60dbaa43 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 280 302 4.6E-23 T 05-07-2017 AC028_RS21085 986e24777a78bf496698bded60dbaa43 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 17 36 4.6E-23 T 05-07-2017 AC028_RS21085 986e24777a78bf496698bded60dbaa43 446 PIRSF PIRSF037495 8 445 4.3E-107 T 05-07-2017 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 AC028_RS21085 986e24777a78bf496698bded60dbaa43 446 SUPERFAMILY SSF51905 9 323 7.78E-35 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21085 986e24777a78bf496698bded60dbaa43 446 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 15 304 1.9E-27 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21085 986e24777a78bf496698bded60dbaa43 446 Gene3D G3DSA:3.50.50.60 120 322 4.1E-28 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21085 986e24777a78bf496698bded60dbaa43 446 Gene3D G3DSA:3.50.50.60 14 119 2.6E-14 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS03545 edf18e3c88e6b42318a91dbaeda8c80b 678 Gene3D G3DSA:3.40.50.300 351 556 4.5E-52 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS03545 edf18e3c88e6b42318a91dbaeda8c80b 678 Gene3D G3DSA:3.40.50.300 98 209 4.5E-52 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS03545 edf18e3c88e6b42318a91dbaeda8c80b 678 SUPERFAMILY SSF52540 105 558 9.03E-46 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS03545 edf18e3c88e6b42318a91dbaeda8c80b 678 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 112 565 9.2E-104 T 05-07-2017 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 AC028_RS02465 e01965463e56c49572e2af060b76cb87 177 Pfam PF04351 Pilus assembly protein, PilP 34 174 2.2E-46 T 05-07-2017 IPR007446 Pilus assembly protein PilP AC028_RS02465 e01965463e56c49572e2af060b76cb87 177 PIRSF PIRSF016481 3 177 3.1E-59 T 05-07-2017 IPR007446 Pilus assembly protein PilP AC028_RS02900 8c99c2782620c4c5f5481e335f8a04c3 1000 Pfam PF07494 Two component regulator propeller 479 499 0.01 T 05-07-2017 IPR011110 Two component regulator propeller AC028_RS02900 8c99c2782620c4c5f5481e335f8a04c3 1000 Pfam PF07494 Two component regulator propeller 61 83 0.0099 T 05-07-2017 IPR011110 Two component regulator propeller AC028_RS02900 8c99c2782620c4c5f5481e335f8a04c3 1000 SUPERFAMILY SSF63829 130 294 1.21E-10 T 05-07-2017 AC028_RS02900 8c99c2782620c4c5f5481e335f8a04c3 1000 SUPERFAMILY SSF55073 845 997 1.73E-38 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS02900 8c99c2782620c4c5f5481e335f8a04c3 1000 Gene3D G3DSA:3.30.70.270 842 997 3.4E-44 T 05-07-2017 AC028_RS02900 8c99c2782620c4c5f5481e335f8a04c3 1000 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 836 997 8.1E-38 T 05-07-2017 IPR000160 GGDEF domain AC028_RS02900 8c99c2782620c4c5f5481e335f8a04c3 1000 SUPERFAMILY SSF63829 311 547 6.08E-8 T 05-07-2017 AC028_RS02900 8c99c2782620c4c5f5481e335f8a04c3 1000 Pfam PF07495 Y_Y_Y domain 698 753 5.7E-17 T 05-07-2017 IPR011123 Two component regulator three Y AC028_RS02900 8c99c2782620c4c5f5481e335f8a04c3 1000 Gene3D G3DSA:2.120.10.30 313 510 6.5E-7 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS02900 8c99c2782620c4c5f5481e335f8a04c3 1000 Gene3D G3DSA:2.120.10.30 142 264 4.2E-7 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS02900 8c99c2782620c4c5f5481e335f8a04c3 1000 Gene3D G3DSA:2.120.10.30 52 99 4.2E-7 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS02900 8c99c2782620c4c5f5481e335f8a04c3 1000 Pfam PF00990 Diguanylate cyclase, GGDEF domain 840 996 4.5E-35 T 05-07-2017 IPR000160 GGDEF domain AC028_RS02900 8c99c2782620c4c5f5481e335f8a04c3 1000 SMART SM00267 829 1000 4.9E-42 T 05-07-2017 IPR000160 GGDEF domain AC028_RS10900 7ebc46f1683c4c4fadff77da555f6828 117 Pfam PF04342 Putative member of DMT superfamily (DUF486) 13 115 2.2E-45 T 05-07-2017 IPR007437 Putative member of DMT superfamily AC028_RS10900 7ebc46f1683c4c4fadff77da555f6828 117 PIRSF PIRSF021239 6 117 1.8E-51 T 05-07-2017 IPR007437 Putative member of DMT superfamily AC028_RS17730 710978ee229c66934720d04f387e5768 510 Gene3D G3DSA:3.40.309.10 279 457 1.0E-54 T 05-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AC028_RS17730 710978ee229c66934720d04f387e5768 510 SUPERFAMILY SSF53720 21 498 6.94E-133 T 05-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AC028_RS17730 710978ee229c66934720d04f387e5768 510 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 263 270 - T 05-07-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AC028_RS17730 710978ee229c66934720d04f387e5768 510 Gene3D G3DSA:3.40.605.10 22 278 1.2E-69 T 05-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AC028_RS17730 710978ee229c66934720d04f387e5768 510 Pfam PF00171 Aldehyde dehydrogenase family 32 491 1.5E-129 T 05-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AC028_RS19465 99cf9359c186f3e1b96823ffbe3a433f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.3E-31 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS19465 99cf9359c186f3e1b96823ffbe3a433f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.3E-31 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS19465 99cf9359c186f3e1b96823ffbe3a433f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 3.3E-31 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS19465 99cf9359c186f3e1b96823ffbe3a433f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.3E-31 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS19465 99cf9359c186f3e1b96823ffbe3a433f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.3E-31 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS19465 99cf9359c186f3e1b96823ffbe3a433f 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.3E-31 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS19465 99cf9359c186f3e1b96823ffbe3a433f 267 Gene3D G3DSA:3.40.50.720 5 262 6.5E-71 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS19465 99cf9359c186f3e1b96823ffbe3a433f 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 260 3.5E-52 T 05-07-2017 AC028_RS19465 99cf9359c186f3e1b96823ffbe3a433f 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 8.8E-6 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS19465 99cf9359c186f3e1b96823ffbe3a433f 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 8.8E-6 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS19465 99cf9359c186f3e1b96823ffbe3a433f 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 8.8E-6 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS19465 99cf9359c186f3e1b96823ffbe3a433f 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 05-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AC028_RS19465 99cf9359c186f3e1b96823ffbe3a433f 267 SUPERFAMILY SSF51735 6 261 1.28E-67 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS21005 b7bec34f4de6201858b1b5937b756da5 772 SUPERFAMILY SSF53474 511 754 1.08E-41 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS21005 b7bec34f4de6201858b1b5937b756da5 772 Pfam PF00326 Prolyl oligopeptidase family 556 753 3.2E-42 T 05-07-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AC028_RS21005 b7bec34f4de6201858b1b5937b756da5 772 Gene3D G3DSA:3.40.50.1820 510 754 3.5E-47 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS21005 b7bec34f4de6201858b1b5937b756da5 772 SUPERFAMILY SSF82171 171 503 9.81E-34 T 05-07-2017 AC028_RS21005 b7bec34f4de6201858b1b5937b756da5 772 Gene3D G3DSA:2.140.10.30 36 505 2.8E-60 T 05-07-2017 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AC028_RS21005 b7bec34f4de6201858b1b5937b756da5 772 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 170 474 5.5E-45 T 05-07-2017 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AC028_RS11870 0cc2a2eb4aa626df9b7063ed3093d390 286 SUPERFAMILY SSF55174 39 122 2.88E-11 T 05-07-2017 AC028_RS11870 0cc2a2eb4aa626df9b7063ed3093d390 286 Pfam PF00849 RNA pseudouridylate synthase 99 236 3.1E-17 T 05-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS11870 0cc2a2eb4aa626df9b7063ed3093d390 286 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 137 151 - T 05-07-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AC028_RS11870 0cc2a2eb4aa626df9b7063ed3093d390 286 Pfam PF01479 S4 domain 39 80 3.2E-8 T 05-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AC028_RS11870 0cc2a2eb4aa626df9b7063ed3093d390 286 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 103 267 2.9E-40 T 05-07-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AC028_RS11870 0cc2a2eb4aa626df9b7063ed3093d390 286 SUPERFAMILY SSF55120 99 271 3.04E-35 T 05-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS11870 0cc2a2eb4aa626df9b7063ed3093d390 286 Gene3D G3DSA:3.10.290.10 39 100 1.1E-13 T 05-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AC028_RS01080 2329b1ff693b4872e644d511108fc61e 487 Gene3D G3DSA:1.50.10.10 56 484 4.9E-169 T 05-07-2017 IPR012341 Six-hairpin glycosidase GO:0003824 AC028_RS01080 2329b1ff693b4872e644d511108fc61e 487 SUPERFAMILY SSF48208 42 484 3.1E-167 T 05-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AC028_RS01080 2329b1ff693b4872e644d511108fc61e 487 SMART SM01149 72 475 4.6E-247 T 05-07-2017 IPR008313 Metal-independent alpha-mannosidase AC028_RS01080 2329b1ff693b4872e644d511108fc61e 487 Pfam PF06824 Protein of unknown function (DUF1237) 72 474 1.4E-147 T 05-07-2017 IPR008313 Metal-independent alpha-mannosidase AC028_RS01080 2329b1ff693b4872e644d511108fc61e 487 PIRSF PIRSF028846 50 486 4.5E-196 T 05-07-2017 IPR008313 Metal-independent alpha-mannosidase AC028_RS17100 44c94c1c5161a07eccbb23fdd3539dbf 145 Pfam PF05523 WxcM-like, C-terminal 3 132 1.3E-45 T 05-07-2017 IPR008894 WxcM-like, C-terminal MetaCyc: PWY-6953|MetaCyc: PWY-7688 AC028_RS17100 44c94c1c5161a07eccbb23fdd3539dbf 145 SUPERFAMILY SSF51182 5 130 2.27E-35 T 05-07-2017 IPR011051 RmlC-like cupin domain AC028_RS16400 a6355dd967b9127c11054d27f02752ae 401 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 39 389 7.3E-126 T 05-07-2017 AC028_RS16400 a6355dd967b9127c11054d27f02752ae 401 Gene3D G3DSA:1.50.10.10 10 399 8.9E-133 T 05-07-2017 IPR012341 Six-hairpin glycosidase GO:0003824 AC028_RS16400 a6355dd967b9127c11054d27f02752ae 401 SUPERFAMILY SSF48208 14 398 1.23E-121 T 05-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AC028_RS15530 41aa12c51bd95a4f8e179f70aab03b6d 564 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 375 2.4E-105 T 05-07-2017 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AC028_RS15530 41aa12c51bd95a4f8e179f70aab03b6d 564 SUPERFAMILY SSF52402 212 487 1.99E-74 T 05-07-2017 AC028_RS15530 41aa12c51bd95a4f8e179f70aab03b6d 564 SMART SM01172 5 210 0.0044 T 05-07-2017 IPR024286 Domain of unknown function DUF3700 AC028_RS15530 41aa12c51bd95a4f8e179f70aab03b6d 564 Pfam PF00733 Asparagine synthase 214 370 1.1E-55 T 05-07-2017 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AC028_RS15530 41aa12c51bd95a4f8e179f70aab03b6d 564 SUPERFAMILY SSF56235 1 197 1.37E-55 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS15530 41aa12c51bd95a4f8e179f70aab03b6d 564 Pfam PF13537 Glutamine amidotransferase domain 50 169 2.1E-40 T 05-07-2017 IPR017932 Glutamine amidotransferase type 2 domain AC028_RS15530 41aa12c51bd95a4f8e179f70aab03b6d 564 Gene3D G3DSA:3.60.20.10 1 194 2.1E-61 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS15530 41aa12c51bd95a4f8e179f70aab03b6d 564 Gene3D G3DSA:3.40.50.620 198 519 3.7E-112 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS08080 f93417f915b0e7caa9eb39f8c61ac689 353 Gene3D G3DSA:3.40.640.10 9 257 6.1E-59 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS08080 f93417f915b0e7caa9eb39f8c61ac689 353 Gene3D G3DSA:3.90.1150.10 259 348 8.6E-32 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS08080 f93417f915b0e7caa9eb39f8c61ac689 353 Pfam PF01212 Beta-eliminating lyase 22 300 3.4E-30 T 05-07-2017 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AC028_RS08080 f93417f915b0e7caa9eb39f8c61ac689 353 SUPERFAMILY SSF53383 10 346 4.57E-74 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS15020 c090ec8a1b4c9a1fd8e3e74f4c7762e8 300 Pfam PF13557 Putative MetA-pathway of phenol degradation 62 281 7.0E-21 T 05-07-2017 IPR025737 MetA-pathway of phenol degradation, putative AC028_RS04390 7a79996d69f8ba9e04df268647dc3a1c 394 Pfam PF07394 Protein of unknown function (DUF1501) 31 381 6.5E-45 T 05-07-2017 IPR010869 Protein of unknown function DUF1501 AC028_RS11915 bb5d7bfccd3cef604b5a62b601ffdb6f 806 SUPERFAMILY SSF56935 76 315 1.32E-90 T 05-07-2017 AC028_RS11915 bb5d7bfccd3cef604b5a62b601ffdb6f 806 SUPERFAMILY SSF56935 352 806 1.32E-90 T 05-07-2017 AC028_RS11915 bb5d7bfccd3cef604b5a62b601ffdb6f 806 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 789 806 - T 05-07-2017 IPR010917 TonB-dependent receptor, conserved site AC028_RS11915 bb5d7bfccd3cef604b5a62b601ffdb6f 806 Pfam PF07715 TonB-dependent Receptor Plug Domain 93 194 1.2E-10 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS11915 bb5d7bfccd3cef604b5a62b601ffdb6f 806 Gene3D G3DSA:2.40.170.20 209 806 3.2E-87 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS11915 bb5d7bfccd3cef604b5a62b601ffdb6f 806 Pfam PF00593 TonB dependent receptor 543 805 1.1E-28 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS11915 bb5d7bfccd3cef604b5a62b601ffdb6f 806 Gene3D G3DSA:2.170.130.10 93 208 8.1E-13 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS09920 b9067abef9ac9b252dc37ce64933deeb 549 Pfam PF07690 Major Facilitator Superfamily 43 434 2.1E-9 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS09920 b9067abef9ac9b252dc37ce64933deeb 549 SUPERFAMILY SSF103473 504 532 1.83E-18 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS09920 b9067abef9ac9b252dc37ce64933deeb 549 SUPERFAMILY SSF103473 273 444 1.83E-18 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS09920 b9067abef9ac9b252dc37ce64933deeb 549 SUPERFAMILY SSF103473 31 223 1.83E-18 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS09920 b9067abef9ac9b252dc37ce64933deeb 549 Gene3D G3DSA:1.20.1250.20 32 210 4.6E-12 T 05-07-2017 AC028_RS09920 b9067abef9ac9b252dc37ce64933deeb 549 Gene3D G3DSA:1.20.1250.20 315 444 1.5E-5 T 05-07-2017 AC028_RS09920 b9067abef9ac9b252dc37ce64933deeb 549 Gene3D G3DSA:1.20.1250.20 505 532 1.5E-5 T 05-07-2017 AC028_RS12280 bd85b3b397dcc6eab98d40ea01c18a88 325 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 236 325 4.5E-38 T 05-07-2017 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AC028_RS12280 bd85b3b397dcc6eab98d40ea01c18a88 325 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 6 324 3.8E-135 T 05-07-2017 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AC028_RS12280 bd85b3b397dcc6eab98d40ea01c18a88 325 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 5 325 72.37 T 05-07-2017 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AC028_RS12280 bd85b3b397dcc6eab98d40ea01c18a88 325 SUPERFAMILY SSF53901 7 325 3.75E-75 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS12280 bd85b3b397dcc6eab98d40ea01c18a88 325 Gene3D G3DSA:3.40.47.10 165 324 6.9E-55 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS12280 bd85b3b397dcc6eab98d40ea01c18a88 325 Gene3D G3DSA:3.40.47.10 6 164 6.4E-69 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS12280 bd85b3b397dcc6eab98d40ea01c18a88 325 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 187 1.1E-35 T 05-07-2017 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AC028_RS17495 b2b26d20a316b37007048a86c855c930 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 101 122 1.1E-26 T 05-07-2017 IPR005511 Senescence marker protein-30 (SMP-30) AC028_RS17495 b2b26d20a316b37007048a86c855c930 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 207 224 1.1E-26 T 05-07-2017 IPR005511 Senescence marker protein-30 (SMP-30) AC028_RS17495 b2b26d20a316b37007048a86c855c930 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 249 267 1.1E-26 T 05-07-2017 IPR005511 Senescence marker protein-30 (SMP-30) AC028_RS17495 b2b26d20a316b37007048a86c855c930 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 167 187 1.1E-26 T 05-07-2017 IPR005511 Senescence marker protein-30 (SMP-30) AC028_RS17495 b2b26d20a316b37007048a86c855c930 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 20 37 1.1E-26 T 05-07-2017 IPR005511 Senescence marker protein-30 (SMP-30) AC028_RS17495 b2b26d20a316b37007048a86c855c930 303 Gene3D G3DSA:2.120.10.30 7 300 3.5E-82 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS17495 b2b26d20a316b37007048a86c855c930 303 SUPERFAMILY SSF63829 5 299 1.57E-57 T 05-07-2017 AC028_RS17495 b2b26d20a316b37007048a86c855c930 303 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 20 267 6.8E-70 T 05-07-2017 IPR013658 SMP-30/Gluconolactonase/LRE-like region AC028_RS18950 75c909ddabd08cb2b0118ebe6cf14311 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 789 0.0 T 05-07-2017 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 AC028_RS18950 75c909ddabd08cb2b0118ebe6cf14311 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 344 9.0E-112 T 05-07-2017 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AC028_RS18950 75c909ddabd08cb2b0118ebe6cf14311 792 PIRSF PIRSF000854 1 792 0.0 T 05-07-2017 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 AC028_RS18950 75c909ddabd08cb2b0118ebe6cf14311 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 414 425 - T 05-07-2017 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AC028_RS18950 75c909ddabd08cb2b0118ebe6cf14311 792 SUPERFAMILY SSF56059 3 384 4.59E-102 T 05-07-2017 AC028_RS18950 75c909ddabd08cb2b0118ebe6cf14311 792 Gene3D G3DSA:3.30.1490.20 3 194 6.9E-67 T 05-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AC028_RS18950 75c909ddabd08cb2b0118ebe6cf14311 792 Gene3D G3DSA:3.50.30.10 373 470 7.7E-34 T 05-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AC028_RS18950 75c909ddabd08cb2b0118ebe6cf14311 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 384 455 2.0E-24 T 05-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AC028_RS18950 75c909ddabd08cb2b0118ebe6cf14311 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 482 788 4.7E-61 T 05-07-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AC028_RS18950 75c909ddabd08cb2b0118ebe6cf14311 792 Gene3D G3DSA:3.20.20.60 481 789 8.3E-105 T 05-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AC028_RS18950 75c909ddabd08cb2b0118ebe6cf14311 792 SUPERFAMILY SSF51621 462 789 8.11E-96 T 05-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AC028_RS18950 75c909ddabd08cb2b0118ebe6cf14311 792 Gene3D G3DSA:3.30.470.20 199 351 3.2E-55 T 05-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AC028_RS18950 75c909ddabd08cb2b0118ebe6cf14311 792 SUPERFAMILY SSF52009 350 466 2.09E-32 T 05-07-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AC028_RS18950 75c909ddabd08cb2b0118ebe6cf14311 792 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 711 726 2.9E-6 T 05-07-2017 AC028_RS18950 75c909ddabd08cb2b0118ebe6cf14311 792 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 694 709 2.9E-6 T 05-07-2017 AC028_RS18950 75c909ddabd08cb2b0118ebe6cf14311 792 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 747 759 2.9E-6 T 05-07-2017 AC028_RS18950 75c909ddabd08cb2b0118ebe6cf14311 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 694 712 - T 05-07-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AC028_RS03045 7374b830a3bdf343c543e1ff60038d42 171 Gene3D G3DSA:3.90.45.10 1 161 3.3E-50 T 05-07-2017 IPR023635 Peptide deformylase AC028_RS03045 7374b830a3bdf343c543e1ff60038d42 171 PIRSF PIRSF004749 1 166 3.5E-42 T 05-07-2017 IPR023635 Peptide deformylase AC028_RS03045 7374b830a3bdf343c543e1ff60038d42 171 PRINTS PR01576 Peptide deformylase signature 33 62 1.8E-27 T 05-07-2017 IPR023635 Peptide deformylase AC028_RS03045 7374b830a3bdf343c543e1ff60038d42 171 PRINTS PR01576 Peptide deformylase signature 109 127 1.8E-27 T 05-07-2017 IPR023635 Peptide deformylase AC028_RS03045 7374b830a3bdf343c543e1ff60038d42 171 PRINTS PR01576 Peptide deformylase signature 97 108 1.8E-27 T 05-07-2017 IPR023635 Peptide deformylase AC028_RS03045 7374b830a3bdf343c543e1ff60038d42 171 PRINTS PR01576 Peptide deformylase signature 128 157 1.8E-27 T 05-07-2017 IPR023635 Peptide deformylase AC028_RS03045 7374b830a3bdf343c543e1ff60038d42 171 Pfam PF01327 Polypeptide deformylase 3 157 3.9E-43 T 05-07-2017 IPR023635 Peptide deformylase AC028_RS03045 7374b830a3bdf343c543e1ff60038d42 171 Hamap MF_00163 Peptide deformylase [def]. 1 169 24.742 T 05-07-2017 IPR023635 Peptide deformylase AC028_RS03045 7374b830a3bdf343c543e1ff60038d42 171 SUPERFAMILY SSF56420 1 163 2.36E-52 T 05-07-2017 IPR023635 Peptide deformylase AC028_RS03045 7374b830a3bdf343c543e1ff60038d42 171 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 3 160 3.6E-33 T 05-07-2017 IPR023635 Peptide deformylase AC028_RS10385 69b5379af33fedf211814d301f866263 366 Pfam PF00534 Glycosyl transferases group 1 222 285 5.6E-7 T 05-07-2017 IPR001296 Glycosyl transferase, family 1 AC028_RS10385 69b5379af33fedf211814d301f866263 366 Gene3D G3DSA:3.40.50.2000 221 325 8.1E-8 T 05-07-2017 AC028_RS10385 69b5379af33fedf211814d301f866263 366 SUPERFAMILY SSF53756 113 329 1.07E-18 T 05-07-2017 AC028_RS08130 deba0bef7462c782aebc912a44287a90 142 SUPERFAMILY SSF52161 1 140 9.81E-58 T 05-07-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AC028_RS08130 deba0bef7462c782aebc912a44287a90 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 05-07-2017 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 AC028_RS08130 deba0bef7462c782aebc912a44287a90 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 27.915 T 05-07-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AC028_RS08130 deba0bef7462c782aebc912a44287a90 142 Gene3D G3DSA:3.90.1180.10 3 141 4.4E-61 T 05-07-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AC028_RS08130 deba0bef7462c782aebc912a44287a90 142 PIRSF PIRSF002181 1 142 6.1E-50 T 05-07-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AC028_RS08130 deba0bef7462c782aebc912a44287a90 142 Pfam PF00572 Ribosomal protein L13 15 138 3.8E-54 T 05-07-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AC028_RS08130 deba0bef7462c782aebc912a44287a90 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 3 142 6.5E-63 T 05-07-2017 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS06650 dc33601e20161fd1c13ebd1de6255609 300 SUPERFAMILY SSF46785 5 90 3.89E-22 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS06650 dc33601e20161fd1c13ebd1de6255609 300 Gene3D G3DSA:1.10.10.10 5 90 8.0E-25 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS06650 dc33601e20161fd1c13ebd1de6255609 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.2E-19 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS06650 dc33601e20161fd1c13ebd1de6255609 300 Gene3D G3DSA:3.40.190.10 177 264 7.1E-24 T 05-07-2017 AC028_RS06650 dc33601e20161fd1c13ebd1de6255609 300 SUPERFAMILY SSF53850 90 299 7.24E-44 T 05-07-2017 AC028_RS06650 dc33601e20161fd1c13ebd1de6255609 300 Gene3D G3DSA:3.40.190.10 91 176 8.5E-6 T 05-07-2017 AC028_RS06650 dc33601e20161fd1c13ebd1de6255609 300 Pfam PF03466 LysR substrate binding domain 90 296 1.2E-43 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS06320 25fe57a3f60cf382ef775d32fb0de395 319 SUPERFAMILY SSF53686 9 315 5.76E-80 T 05-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AC028_RS06320 25fe57a3f60cf382ef775d32fb0de395 319 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 306 1.3E-69 T 05-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AC028_RS06320 25fe57a3f60cf382ef775d32fb0de395 319 Gene3D G3DSA:3.40.50.1100 74 314 3.4E-60 T 05-07-2017 AC028_RS06320 25fe57a3f60cf382ef775d32fb0de395 319 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 47 60 - T 05-07-2017 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AC028_RS01645 304c43c3aed5549330645a09c8de2a4c 173 PIRSF PIRSF006135 1 171 1.6E-55 T 05-07-2017 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AC028_RS01645 304c43c3aed5549330645a09c8de2a4c 173 Gene3D G3DSA:3.40.50.300 3 169 5.6E-65 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01645 304c43c3aed5549330645a09c8de2a4c 173 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 167 2.7E-60 T 05-07-2017 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AC028_RS01645 304c43c3aed5549330645a09c8de2a4c 173 SUPERFAMILY SSF52540 3 169 1.65E-54 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS20855 624b0cee21d01a5b3fb6f7605bfc5e79 322 Gene3D G3DSA:1.20.1640.10 103 298 2.1E-21 T 05-07-2017 AC028_RS20855 624b0cee21d01a5b3fb6f7605bfc5e79 322 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 15 303 26.082 T 05-07-2017 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AC028_RS20855 624b0cee21d01a5b3fb6f7605bfc5e79 322 Pfam PF07549 SecD/SecF GG Motif 38 64 1.4E-7 T 05-07-2017 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AC028_RS20855 624b0cee21d01a5b3fb6f7605bfc5e79 322 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 43 292 1.2E-62 T 05-07-2017 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AC028_RS20855 624b0cee21d01a5b3fb6f7605bfc5e79 322 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 81 289 3.9E-45 T 05-07-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AC028_RS20855 624b0cee21d01a5b3fb6f7605bfc5e79 322 PRINTS PR01755 Bacterial translocase SecF protein signature 240 255 2.3E-27 T 05-07-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AC028_RS20855 624b0cee21d01a5b3fb6f7605bfc5e79 322 PRINTS PR01755 Bacterial translocase SecF protein signature 161 175 2.3E-27 T 05-07-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AC028_RS20855 624b0cee21d01a5b3fb6f7605bfc5e79 322 PRINTS PR01755 Bacterial translocase SecF protein signature 209 227 2.3E-27 T 05-07-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AC028_RS20855 624b0cee21d01a5b3fb6f7605bfc5e79 322 PRINTS PR01755 Bacterial translocase SecF protein signature 42 57 2.3E-27 T 05-07-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AC028_RS20855 624b0cee21d01a5b3fb6f7605bfc5e79 322 Pfam PF02355 Protein export membrane protein 127 296 3.2E-47 T 05-07-2017 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AC028_RS20855 624b0cee21d01a5b3fb6f7605bfc5e79 322 SUPERFAMILY SSF82866 78 297 1.96E-34 T 05-07-2017 AC028_RS19810 c90d15875bd6dc561a018f89390206be 539 Pfam PF10091 Putative glucoamylase 231 478 4.9E-91 T 05-07-2017 IPR019282 Domain of unknown function DUF2329 AC028_RS19810 c90d15875bd6dc561a018f89390206be 539 PIRSF PIRSF028431 13 506 1.1E-220 T 05-07-2017 IPR016883 Uncharacterised conserved protein UCP028431 AC028_RS01775 4069bee7a4655168005ab463c111ebf3 592 Gene3D G3DSA:1.50.10.10 217 588 1.5E-87 T 05-07-2017 IPR012341 Six-hairpin glycosidase GO:0003824 AC028_RS01775 4069bee7a4655168005ab463c111ebf3 592 SUPERFAMILY SSF48208 204 588 1.29E-91 T 05-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AC028_RS01775 4069bee7a4655168005ab463c111ebf3 592 Pfam PF00723 Glycosyl hydrolases family 15 220 522 4.2E-22 T 05-07-2017 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: R-HSA-70221 AC028_RS07060 3df283ddbb4b657ed3abbecba08bba7b 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 135 5.3E-25 T 05-07-2017 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AC028_RS11250 0c7968dddb1b8b4f7dc03dd20f438ca8 213 Gene3D G3DSA:3.40.30.10 10 97 1.1E-13 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS11250 0c7968dddb1b8b4f7dc03dd20f438ca8 213 Pfam PF13409 Glutathione S-transferase, N-terminal domain 14 78 3.3E-10 T 05-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AC028_RS11250 0c7968dddb1b8b4f7dc03dd20f438ca8 213 Gene3D G3DSA:1.20.1050.10 98 208 2.2E-34 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS11250 0c7968dddb1b8b4f7dc03dd20f438ca8 213 SUPERFAMILY SSF47616 86 203 4.4E-11 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS11250 0c7968dddb1b8b4f7dc03dd20f438ca8 213 SUPERFAMILY SSF52833 7 87 6.65E-17 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS22495 3d2a311d2d6aea20b88cf4f2d260a5bb 1318 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 33 180 1.6E-90 T 05-07-2017 IPR005042 Avirulence protein Avr-related AC028_RS22495 3d2a311d2d6aea20b88cf4f2d260a5bb 1318 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 379 588 4.3E-129 T 05-07-2017 IPR005042 Avirulence protein Avr-related AC028_RS22495 3d2a311d2d6aea20b88cf4f2d260a5bb 1318 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 790 996 6.8E-130 T 05-07-2017 IPR005042 Avirulence protein Avr-related AC028_RS22495 3d2a311d2d6aea20b88cf4f2d260a5bb 1318 SUPERFAMILY SSF53901 866 965 5.37E-5 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS18230 ed0fd7ba407fd0fa5de2c2c4d8fd61a3 260 Pfam PF13614 AAA domain 1 176 3.1E-38 T 05-07-2017 IPR025669 AAA domain AC028_RS18230 ed0fd7ba407fd0fa5de2c2c4d8fd61a3 260 Gene3D G3DSA:3.40.50.300 1 250 5.7E-52 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18230 ed0fd7ba407fd0fa5de2c2c4d8fd61a3 260 SUPERFAMILY SSF52540 1 250 6.58E-50 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS08295 b64bd1d393c2bce4b077977c90580bf2 115 SUPERFAMILY SSF69593 18 100 6.67E-7 T 05-07-2017 AC028_RS08375 3761a52b49104fd7bf5d8d13e9af3833 772 SUPERFAMILY SSF74863 199 315 1.96E-30 T 05-07-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AC028_RS08375 3761a52b49104fd7bf5d8d13e9af3833 772 Pfam PF13899 Thioredoxin-like 669 747 5.1E-13 T 05-07-2017 AC028_RS08375 3761a52b49104fd7bf5d8d13e9af3833 772 SUPERFAMILY SSF52833 669 768 3.85E-12 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS08375 3761a52b49104fd7bf5d8d13e9af3833 772 Gene3D G3DSA:3.40.30.10 667 770 5.3E-12 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS08375 3761a52b49104fd7bf5d8d13e9af3833 772 SUPERFAMILY SSF74863 36 153 4.71E-35 T 05-07-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AC028_RS08375 3761a52b49104fd7bf5d8d13e9af3833 772 Pfam PF11412 Disulphide bond corrector protein DsbC 199 314 4.8E-31 T 05-07-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AC028_RS08375 3761a52b49104fd7bf5d8d13e9af3833 772 Pfam PF11412 Disulphide bond corrector protein DsbC 38 152 6.2E-35 T 05-07-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AC028_RS08375 3761a52b49104fd7bf5d8d13e9af3833 772 ProSitePatterns PS00194 Thioredoxin family active site. 680 698 - T 05-07-2017 IPR017937 Thioredoxin, conserved site GO:0045454 AC028_RS08375 3761a52b49104fd7bf5d8d13e9af3833 772 Gene3D G3DSA:2.60.40.1250 34 156 4.8E-43 T 05-07-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AC028_RS08375 3761a52b49104fd7bf5d8d13e9af3833 772 Gene3D G3DSA:2.60.40.1250 199 317 2.9E-34 T 05-07-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AC028_RS08375 3761a52b49104fd7bf5d8d13e9af3833 772 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 383 562 6.1E-11 T 05-07-2017 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AC028_RS19910 7d649e85777ff02c9a140874b8d73086 337 SUPERFAMILY SSF48452 68 185 2.48E-16 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS19910 7d649e85777ff02c9a140874b8d73086 337 Pfam PF13432 Tetratricopeptide repeat 68 120 8.9E-7 T 05-07-2017 AC028_RS19910 7d649e85777ff02c9a140874b8d73086 337 Pfam PF13432 Tetratricopeptide repeat 142 177 5.1E-4 T 05-07-2017 AC028_RS19910 7d649e85777ff02c9a140874b8d73086 337 Gene3D G3DSA:1.25.40.10 67 182 5.5E-20 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS11930 ceb5d7cd2d0719065959d56d1bee9a90 214 SUPERFAMILY SSF53254 1 203 4.32E-54 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS11930 ceb5d7cd2d0719065959d56d1bee9a90 214 Gene3D G3DSA:3.40.50.1240 1 203 4.7E-58 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS11930 ceb5d7cd2d0719065959d56d1bee9a90 214 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 05-07-2017 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 AC028_RS11930 ceb5d7cd2d0719065959d56d1bee9a90 214 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 198 1.4E-56 T 05-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 AC028_RS11930 ceb5d7cd2d0719065959d56d1bee9a90 214 SMART SM00855 2 158 6.1E-22 T 05-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 AC028_RS15790 93787bf8b1661123f8e8ab37e08352c9 243 Gene3D G3DSA:3.40.50.720 3 236 1.2E-68 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS15790 93787bf8b1661123f8e8ab37e08352c9 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 8.0E-30 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS15790 93787bf8b1661123f8e8ab37e08352c9 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 8.0E-30 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS15790 93787bf8b1661123f8e8ab37e08352c9 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 8.0E-30 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS15790 93787bf8b1661123f8e8ab37e08352c9 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 8.0E-30 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS15790 93787bf8b1661123f8e8ab37e08352c9 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 8.0E-30 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS15790 93787bf8b1661123f8e8ab37e08352c9 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 8.8E-12 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS15790 93787bf8b1661123f8e8ab37e08352c9 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 8.8E-12 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS15790 93787bf8b1661123f8e8ab37e08352c9 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 8.8E-12 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS15790 93787bf8b1661123f8e8ab37e08352c9 243 Pfam PF00106 short chain dehydrogenase 5 205 6.0E-50 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS15790 93787bf8b1661123f8e8ab37e08352c9 243 SUPERFAMILY SSF51735 5 243 1.64E-61 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS09835 1a4f3e77e9c234d0c9ddcd2f6a982f18 321 Pfam PF13280 WYL domain 144 313 5.7E-39 T 05-07-2017 IPR026881 WYL domain AC028_RS09835 1a4f3e77e9c234d0c9ddcd2f6a982f18 321 Gene3D G3DSA:1.10.10.10 1 64 3.8E-14 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS09835 1a4f3e77e9c234d0c9ddcd2f6a982f18 321 SUPERFAMILY SSF46785 2 47 2.18E-6 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS09835 1a4f3e77e9c234d0c9ddcd2f6a982f18 321 Pfam PF08279 HTH domain 6 61 3.3E-12 T 05-07-2017 IPR013196 Helix-turn-helix, type 11 AC028_RS14585 4e316c20bf317d96d79d187269a66d2f 383 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 64 2.0E-19 T 05-07-2017 IPR025713 Motility protein B, N-terminal domain AC028_RS14585 4e316c20bf317d96d79d187269a66d2f 383 Gene3D G3DSA:3.30.1330.60 169 276 3.0E-17 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS14585 4e316c20bf317d96d79d187269a66d2f 383 SUPERFAMILY SSF103088 164 276 7.98E-20 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS14585 4e316c20bf317d96d79d187269a66d2f 383 Pfam PF00691 OmpA family 173 257 6.9E-13 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS14575 e8d7a4089ddefc29f77b210f8c878be8 94 Pfam PF13223 Protein of unknown function (DUF4031) 3 80 5.6E-29 T 05-07-2017 IPR025109 Domain of unknown function DUF4031 AC028_RS01920 ce0aed6c97e99430e9117a1e2986e460 385 Gene3D G3DSA:1.10.287.130 169 238 1.4E-14 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS01920 ce0aed6c97e99430e9117a1e2986e460 385 SMART SM00387 282 385 3.5E-20 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS01920 ce0aed6c97e99430e9117a1e2986e460 385 Pfam PF00512 His Kinase A (phospho-acceptor) domain 178 242 3.3E-16 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS01920 ce0aed6c97e99430e9117a1e2986e460 385 SUPERFAMILY SSF55874 247 383 5.24E-25 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS01920 ce0aed6c97e99430e9117a1e2986e460 385 Gene3D G3DSA:3.30.565.10 247 383 1.8E-25 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS01920 ce0aed6c97e99430e9117a1e2986e460 385 Pfam PF00672 HAMP domain 102 171 7.1E-10 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS01920 ce0aed6c97e99430e9117a1e2986e460 385 SMART SM00388 176 242 1.9E-18 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS01920 ce0aed6c97e99430e9117a1e2986e460 385 SUPERFAMILY SSF47384 159 242 2.16E-18 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS01920 ce0aed6c97e99430e9117a1e2986e460 385 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 286 380 3.3E-13 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS17105 472ca319f16bc737493e3b499d797664 223 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 163 197 8.2E-4 T 05-07-2017 IPR001451 Hexapeptide repeat AC028_RS17105 472ca319f16bc737493e3b499d797664 223 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 127 161 1.4E-7 T 05-07-2017 IPR001451 Hexapeptide repeat AC028_RS17105 472ca319f16bc737493e3b499d797664 223 Gene3D G3DSA:3.40.50.720 6 92 3.6E-5 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS17105 472ca319f16bc737493e3b499d797664 223 SUPERFAMILY SSF51161 4 218 3.74E-38 T 05-07-2017 IPR011004 Trimeric LpxA-like AC028_RS17105 472ca319f16bc737493e3b499d797664 223 Gene3D G3DSA:2.160.10.10 97 214 1.6E-28 T 05-07-2017 AC028_RS17105 472ca319f16bc737493e3b499d797664 223 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 6 211 1.3E-61 T 05-07-2017 IPR020019 Sialic acid O-acyltransferase NeuD-like AC028_RS22320 0eb8c18fd25552441c31cacfde77a3cf 89 Pfam PF04221 RelB antitoxin 8 76 2.9E-22 T 05-07-2017 IPR007337 RelB antitoxin/Antitoxin DinJ AC028_RS22320 0eb8c18fd25552441c31cacfde77a3cf 89 PIRSF PIRSF003108 1 89 2.4E-29 T 05-07-2017 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 AC028_RS22320 0eb8c18fd25552441c31cacfde77a3cf 89 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 2 85 1.3E-21 T 05-07-2017 IPR007337 RelB antitoxin/Antitoxin DinJ AC028_RS12565 9e4d7d334f1ed1c4910d8839b9ddb4ab 259 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 20 234 3.4E-33 T 05-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 AC028_RS12565 9e4d7d334f1ed1c4910d8839b9ddb4ab 259 SMART SM00855 19 193 4.1E-20 T 05-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 AC028_RS12565 9e4d7d334f1ed1c4910d8839b9ddb4ab 259 SUPERFAMILY SSF53254 17 235 6.94E-43 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS12565 9e4d7d334f1ed1c4910d8839b9ddb4ab 259 Gene3D G3DSA:3.40.50.1240 17 232 5.7E-45 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS12565 9e4d7d334f1ed1c4910d8839b9ddb4ab 259 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 22 31 - T 05-07-2017 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 AC028_RS13120 e6c2a2d6368b1ef866ae3f60193130bb 332 Pfam PF13581 Histidine kinase-like ATPase domain 15 106 2.0E-7 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13120 e6c2a2d6368b1ef866ae3f60193130bb 332 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 166 287 7.3E-7 T 05-07-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AC028_RS13120 e6c2a2d6368b1ef866ae3f60193130bb 332 SUPERFAMILY SSF81606 152 329 1.7E-8 T 05-07-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AC028_RS06970 99a4c760b80d18e3158a9219a73de0ce 368 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 40 358 1.7E-47 T 05-07-2017 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AC028_RS06970 99a4c760b80d18e3158a9219a73de0ce 368 Gene3D G3DSA:3.20.20.190 35 364 1.8E-83 T 05-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AC028_RS06970 99a4c760b80d18e3158a9219a73de0ce 368 SUPERFAMILY SSF51695 35 364 6.8E-71 T 05-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AC028_RS16795 5ea60b927c7f762219b3b226438c4815 149 Gene3D G3DSA:3.10.430.100 62 147 4.6E-23 T 05-07-2017 IPR020069 Ribosomal protein L9, C-terminal AC028_RS16795 5ea60b927c7f762219b3b226438c4815 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 7.6E-21 T 05-07-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS16795 5ea60b927c7f762219b3b226438c4815 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 146 9.2E-21 T 05-07-2017 IPR020069 Ribosomal protein L9, C-terminal AC028_RS16795 5ea60b927c7f762219b3b226438c4815 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 05-07-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS16795 5ea60b927c7f762219b3b226438c4815 149 SUPERFAMILY SSF55658 1 57 7.85E-18 T 05-07-2017 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AC028_RS16795 5ea60b927c7f762219b3b226438c4815 149 SUPERFAMILY SSF55653 61 147 2.75E-21 T 05-07-2017 IPR020069 Ribosomal protein L9, C-terminal AC028_RS16795 5ea60b927c7f762219b3b226438c4815 149 Gene3D G3DSA:3.40.5.10 1 52 5.4E-24 T 05-07-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS16795 5ea60b927c7f762219b3b226438c4815 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 4.8E-41 T 05-07-2017 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS16795 5ea60b927c7f762219b3b226438c4815 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 23.657 T 05-07-2017 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS09445 732734f24116e31feb2221832e90fde2 214 Pfam PF00813 FliP family 13 209 1.1E-63 T 05-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AC028_RS09445 732734f24116e31feb2221832e90fde2 214 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 142 157 - T 05-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AC028_RS09445 732734f24116e31feb2221832e90fde2 214 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 190 202 - T 05-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AC028_RS09445 732734f24116e31feb2221832e90fde2 214 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 9 209 1.2E-89 T 05-07-2017 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 AC028_RS09445 732734f24116e31feb2221832e90fde2 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 10 29 2.0E-63 T 05-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AC028_RS09445 732734f24116e31feb2221832e90fde2 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 29 49 2.0E-63 T 05-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AC028_RS09445 732734f24116e31feb2221832e90fde2 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 142 162 2.0E-63 T 05-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AC028_RS09445 732734f24116e31feb2221832e90fde2 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 163 184 2.0E-63 T 05-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AC028_RS09445 732734f24116e31feb2221832e90fde2 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 187 212 2.0E-63 T 05-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AC028_RS09445 732734f24116e31feb2221832e90fde2 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 49 68 2.0E-63 T 05-07-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AC028_RS16470 e98e410da8f2e858a56ab84382938765 481 SUPERFAMILY SSF52266 258 474 1.98E-49 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS16470 e98e410da8f2e858a56ab84382938765 481 SUPERFAMILY SSF52266 14 238 4.58E-39 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS16470 e98e410da8f2e858a56ab84382938765 481 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 291 467 2.0E-23 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS16470 e98e410da8f2e858a56ab84382938765 481 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 48 224 7.1E-20 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS16470 e98e410da8f2e858a56ab84382938765 481 Gene3D G3DSA:3.40.50.1110 13 238 3.7E-58 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS16470 e98e410da8f2e858a56ab84382938765 481 Gene3D G3DSA:3.40.50.1110 264 474 2.7E-62 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS07965 be8fdcdb818c636e458295c89c9539b1 162 Pfam PF12802 MarR family 45 104 4.5E-12 T 05-07-2017 AC028_RS07965 be8fdcdb818c636e458295c89c9539b1 162 SMART SM00347 40 140 3.7E-16 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS07965 be8fdcdb818c636e458295c89c9539b1 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 96 1.6E-10 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS07965 be8fdcdb818c636e458295c89c9539b1 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 100 116 1.6E-10 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS07965 be8fdcdb818c636e458295c89c9539b1 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 130 150 1.6E-10 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS07965 be8fdcdb818c636e458295c89c9539b1 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 80 1.6E-10 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS07965 be8fdcdb818c636e458295c89c9539b1 162 ProSitePatterns PS01117 MarR-type HTH domain signature. 79 113 - T 05-07-2017 IPR023187 Transcriptional regulator MarR-type, conserved site AC028_RS07965 be8fdcdb818c636e458295c89c9539b1 162 SUPERFAMILY SSF46785 9 152 1.01E-32 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS07965 be8fdcdb818c636e458295c89c9539b1 162 Gene3D G3DSA:1.10.10.10 3 152 1.6E-40 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS09930 6489a48eb68b35a65a20780127e70a81 301 Pfam PF00990 Diguanylate cyclase, GGDEF domain 135 284 3.1E-29 T 05-07-2017 IPR000160 GGDEF domain AC028_RS09930 6489a48eb68b35a65a20780127e70a81 301 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 131 286 4.3E-29 T 05-07-2017 IPR000160 GGDEF domain AC028_RS09930 6489a48eb68b35a65a20780127e70a81 301 Pfam PF00672 HAMP domain 58 124 1.8E-6 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS09930 6489a48eb68b35a65a20780127e70a81 301 Gene3D G3DSA:3.30.70.270 137 288 7.4E-36 T 05-07-2017 AC028_RS09930 6489a48eb68b35a65a20780127e70a81 301 SUPERFAMILY SSF55073 140 288 5.96E-34 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS09930 6489a48eb68b35a65a20780127e70a81 301 SMART SM00267 124 290 1.3E-25 T 05-07-2017 IPR000160 GGDEF domain AC028_RS03780 70a1180b912642cba46ee6b8f3a27df4 88 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 12 66 3.2E-18 T 05-07-2017 IPR012783 Zinc finger, C4 DksA/TraR-type AC028_RS03780 70a1180b912642cba46ee6b8f3a27df4 88 PRINTS PR00618 DksA/TraR zinc finger signature 39 50 3.2E-5 T 05-07-2017 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AC028_RS03780 70a1180b912642cba46ee6b8f3a27df4 88 PRINTS PR00618 DksA/TraR zinc finger signature 51 63 3.2E-5 T 05-07-2017 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AC028_RS03780 70a1180b912642cba46ee6b8f3a27df4 88 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 39 63 - T 05-07-2017 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AC028_RS03780 70a1180b912642cba46ee6b8f3a27df4 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 35 68 6.5E-13 T 05-07-2017 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AC028_RS03780 70a1180b912642cba46ee6b8f3a27df4 88 SUPERFAMILY SSF57716 38 72 1.11E-8 T 05-07-2017 AC028_RS17710 c10017fb559741387691ad5861f2d7aa 350 SUPERFAMILY SSF56176 17 202 5.14E-37 T 05-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AC028_RS17710 c10017fb559741387691ad5861f2d7aa 350 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 19 347 6.1E-63 T 05-07-2017 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS17710 c10017fb559741387691ad5861f2d7aa 350 Pfam PF01565 FAD binding domain 35 152 1.1E-16 T 05-07-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AC028_RS17710 c10017fb559741387691ad5861f2d7aa 350 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 350 80.11 T 05-07-2017 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS17710 c10017fb559741387691ad5861f2d7aa 350 Gene3D G3DSA:3.30.43.10 16 78 8.7E-19 T 05-07-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AC028_RS17710 c10017fb559741387691ad5861f2d7aa 350 Gene3D G3DSA:3.90.78.10 246 349 5.5E-40 T 05-07-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS17710 c10017fb559741387691ad5861f2d7aa 350 Gene3D G3DSA:3.30.465.10 86 245 1.1E-50 T 05-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AC028_RS17710 c10017fb559741387691ad5861f2d7aa 350 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 222 346 2.4E-33 T 05-07-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS17710 c10017fb559741387691ad5861f2d7aa 350 SUPERFAMILY SSF56194 220 348 1.57E-43 T 05-07-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 9 879 0.0 T 05-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 8 879 23.346 T 05-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 SUPERFAMILY SSF47323 683 879 9.91E-32 T 05-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 Gene3D G3DSA:3.40.50.620 8 226 2.0E-151 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 Gene3D G3DSA:3.40.50.620 443 591 2.0E-151 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 Gene3D G3DSA:3.40.50.620 637 666 2.0E-151 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 05-07-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 Gene3D G3DSA:3.90.740.10 227 442 1.6E-53 T 05-07-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 Gene3D G3DSA:1.10.730.10 667 815 2.3E-39 T 05-07-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 225 421 1.3E-69 T 05-07-2017 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 SUPERFAMILY SSF52374 6 230 3.55E-146 T 05-07-2017 AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 SUPERFAMILY SSF52374 434 684 3.55E-146 T 05-07-2017 AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 189 202 1.8E-45 T 05-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 505 523 1.8E-45 T 05-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 542 564 1.8E-45 T 05-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 157 173 1.8E-45 T 05-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 219 238 1.8E-45 T 05-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 575 585 1.8E-45 T 05-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 131 148 1.8E-45 T 05-07-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 436 590 5.3E-9 T 05-07-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 19 175 2.9E-27 T 05-07-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 637 674 3.7E-6 T 05-07-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 SUPERFAMILY SSF50677 230 433 1.05E-48 T 05-07-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AC028_RS22045 dab3d479d4219552f55f0ae57a42f247 880 Pfam PF08264 Anticodon-binding domain of tRNA 718 841 2.6E-13 T 05-07-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AC028_RS02890 78000fd18c5625549dd19e701fc1b453 479 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 05-07-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AC028_RS02890 78000fd18c5625549dd19e701fc1b453 479 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 473 61.536 T 05-07-2017 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AC028_RS02890 78000fd18c5625549dd19e701fc1b453 479 Pfam PF00330 Aconitase family (aconitate hydratase) 8 464 4.3E-153 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS02890 78000fd18c5625549dd19e701fc1b453 479 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 472 1.3E-232 T 05-07-2017 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AC028_RS02890 78000fd18c5625549dd19e701fc1b453 479 Gene3D G3DSA:3.30.499.10 3 162 8.3E-21 T 05-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS02890 78000fd18c5625549dd19e701fc1b453 479 Gene3D G3DSA:3.40.1060.10 172 285 1.9E-39 T 05-07-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS02890 78000fd18c5625549dd19e701fc1b453 479 SUPERFAMILY SSF53732 3 474 9.03E-161 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS02890 78000fd18c5625549dd19e701fc1b453 479 Gene3D G3DSA:3.30.499.10 341 475 1.4E-58 T 05-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS02890 78000fd18c5625549dd19e701fc1b453 479 PRINTS PR00415 Aconitase family signature 88 101 1.5E-47 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS02890 78000fd18c5625549dd19e701fc1b453 479 PRINTS PR00415 Aconitase family signature 114 122 1.5E-47 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS02890 78000fd18c5625549dd19e701fc1b453 479 PRINTS PR00415 Aconitase family signature 201 214 1.5E-47 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS02890 78000fd18c5625549dd19e701fc1b453 479 PRINTS PR00415 Aconitase family signature 125 138 1.5E-47 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS02890 78000fd18c5625549dd19e701fc1b453 479 PRINTS PR00415 Aconitase family signature 215 228 1.5E-47 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS02890 78000fd18c5625549dd19e701fc1b453 479 PRINTS PR00415 Aconitase family signature 292 306 1.5E-47 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS02890 78000fd18c5625549dd19e701fc1b453 479 PRINTS PR00415 Aconitase family signature 139 154 1.5E-47 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS02890 78000fd18c5625549dd19e701fc1b453 479 PRINTS PR00415 Aconitase family signature 349 360 1.5E-47 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS02890 78000fd18c5625549dd19e701fc1b453 479 PRINTS PR00415 Aconitase family signature 406 419 1.5E-47 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS02890 78000fd18c5625549dd19e701fc1b453 479 ProSitePatterns PS01244 Aconitase family signature 2. 406 419 - T 05-07-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AC028_RS04490 cba49f0933fdb8424f8cd9e5521ee30e 330 SUPERFAMILY SSF51735 6 316 4.25E-39 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS04490 cba49f0933fdb8424f8cd9e5521ee30e 330 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 217 4.1E-12 T 05-07-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AC028_RS04490 cba49f0933fdb8424f8cd9e5521ee30e 330 Gene3D G3DSA:3.40.50.720 5 217 1.7E-26 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS13685 11d7c74cde46504324851c4b1d14709a 118 Gene3D G3DSA:3.30.1130.10 1 116 1.7E-40 T 05-07-2017 AC028_RS13685 11d7c74cde46504324851c4b1d14709a 118 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 4.3E-24 T 05-07-2017 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AC028_RS13685 11d7c74cde46504324851c4b1d14709a 118 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.3E-30 T 05-07-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AC028_RS13685 11d7c74cde46504324851c4b1d14709a 118 SUPERFAMILY SSF55620 1 116 6.12E-36 T 05-07-2017 AC028_RS13685 11d7c74cde46504324851c4b1d14709a 118 SMART SM00905 4 114 1.7E-47 T 05-07-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AC028_RS13685 11d7c74cde46504324851c4b1d14709a 118 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 1.3E-32 T 05-07-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AC028_RS05435 cc105a39057ffba85c44c4df02eb030c 144 SUPERFAMILY SSF52821 23 143 1.7E-29 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS05435 cc105a39057ffba85c44c4df02eb030c 144 Pfam PF00581 Rhodanese-like domain 44 135 7.0E-18 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS05435 cc105a39057ffba85c44c4df02eb030c 144 SMART SM00450 42 139 8.2E-24 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS05435 cc105a39057ffba85c44c4df02eb030c 144 Gene3D G3DSA:3.40.250.10 26 143 9.3E-29 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS02590 e3942591b3b445309bac64582b7cccb2 385 SMART SM00729 8 225 5.2E-51 T 05-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AC028_RS02590 e3942591b3b445309bac64582b7cccb2 385 Gene3D G3DSA:3.80.30.20 9 240 2.8E-28 T 05-07-2017 IPR023404 Radical SAM, alpha/beta horseshoe AC028_RS02590 e3942591b3b445309bac64582b7cccb2 385 Pfam PF04055 Radical SAM superfamily 13 178 3.8E-20 T 05-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AC028_RS02590 e3942591b3b445309bac64582b7cccb2 385 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 9 357 1.2E-109 T 05-07-2017 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 AC028_RS02590 e3942591b3b445309bac64582b7cccb2 385 Pfam PF06969 HemN C-terminal domain 317 373 1.2E-8 T 05-07-2017 IPR010723 HemN, C-terminal AC028_RS02590 e3942591b3b445309bac64582b7cccb2 385 SUPERFAMILY SSF102114 4 384 1.31E-106 T 05-07-2017 AC028_RS02665 567364f57742e5eb9e708bffec9c23f5 205 SUPERFAMILY SSF51391 5 203 7.59E-57 T 05-07-2017 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AC028_RS02665 567364f57742e5eb9e708bffec9c23f5 205 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 10 199 5.8E-57 T 05-07-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AC028_RS02665 567364f57742e5eb9e708bffec9c23f5 205 Pfam PF02581 Thiamine monophosphate synthase/TENI 10 188 1.1E-52 T 05-07-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AC028_RS02665 567364f57742e5eb9e708bffec9c23f5 205 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 8 205 22.922 T 05-07-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AC028_RS02665 567364f57742e5eb9e708bffec9c23f5 205 Gene3D G3DSA:3.20.20.70 8 203 1.3E-59 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS21730 36557209b7c39b35df1f7d1c9346a938 341 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 9 338 2.3E-135 T 05-07-2017 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AC028_RS21730 36557209b7c39b35df1f7d1c9346a938 341 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 7 338 38.29 T 05-07-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AC028_RS21730 36557209b7c39b35df1f7d1c9346a938 341 Gene3D G3DSA:3.40.50.720 6 145 3.5E-64 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS21730 36557209b7c39b35df1f7d1c9346a938 341 PIRSF PIRSF000148 7 341 7.7E-134 T 05-07-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AC028_RS21730 36557209b7c39b35df1f7d1c9346a938 341 SUPERFAMILY SSF55347 133 325 7.4E-75 T 05-07-2017 AC028_RS21730 36557209b7c39b35df1f7d1c9346a938 341 SMART SM00859 9 124 2.5E-47 T 05-07-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AC028_RS21730 36557209b7c39b35df1f7d1c9346a938 341 Gene3D G3DSA:3.30.360.10 146 320 3.8E-81 T 05-07-2017 AC028_RS21730 36557209b7c39b35df1f7d1c9346a938 341 SUPERFAMILY SSF51735 8 161 4.36E-51 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS21730 36557209b7c39b35df1f7d1c9346a938 341 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 324 1.7E-58 T 05-07-2017 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AC028_RS21730 36557209b7c39b35df1f7d1c9346a938 341 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 9 123 2.0E-33 T 05-07-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AC028_RS06950 a9e408fadc739d64cfa04c12ab7a01c8 388 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 169 300 4.3E-18 T 05-07-2017 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AC028_RS06950 a9e408fadc739d64cfa04c12ab7a01c8 388 Gene3D G3DSA:2.30.130.10 12 68 3.7E-18 T 05-07-2017 IPR015947 PUA-like domain AC028_RS06950 a9e408fadc739d64cfa04c12ab7a01c8 388 SMART SM00359 6 87 0.0097 T 05-07-2017 IPR002478 PUA domain GO:0003723 AC028_RS06950 a9e408fadc739d64cfa04c12ab7a01c8 388 Gene3D G3DSA:3.30.750.80 73 173 9.1E-25 T 05-07-2017 AC028_RS06950 a9e408fadc739d64cfa04c12ab7a01c8 388 SUPERFAMILY SSF53335 78 384 3.82E-68 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS06950 a9e408fadc739d64cfa04c12ab7a01c8 388 Gene3D G3DSA:3.40.50.150 179 387 1.2E-57 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS06950 a9e408fadc739d64cfa04c12ab7a01c8 388 SUPERFAMILY SSF88697 12 69 7.46E-11 T 05-07-2017 IPR015947 PUA-like domain AC028_RS12855 63310ffe5320322fd4542cb214187d53 85 Gene3D G3DSA:3.30.1070.10 32 82 7.0E-18 T 05-07-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 AC028_RS12855 63310ffe5320322fd4542cb214187d53 85 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 81 3.0E-27 T 05-07-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 AC028_RS12855 63310ffe5320322fd4542cb214187d53 85 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 82 17.262 T 05-07-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 AC028_RS12855 63310ffe5320322fd4542cb214187d53 85 SUPERFAMILY SSF55229 31 82 1.1E-13 T 05-07-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 AC028_RS12855 63310ffe5320322fd4542cb214187d53 85 Pfam PF03776 Septum formation topological specificity factor MinE 13 80 3.7E-21 T 05-07-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 AC028_RS03990 43eae849ffb7cbd7d96385bc95a4ea42 66 Gene3D G3DSA:3.30.420.10 1 50 4.0E-9 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS03990 43eae849ffb7cbd7d96385bc95a4ea42 66 Pfam PF13683 Integrase core domain 1 49 3.9E-17 T 05-07-2017 IPR001584 Integrase, catalytic core GO:0015074 AC028_RS03990 43eae849ffb7cbd7d96385bc95a4ea42 66 SUPERFAMILY SSF53098 1 58 7.59E-10 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS22490 26f91cf454679ea55d21a6f055825aa5 84 SUPERFAMILY SSF47598 24 82 1.11E-12 T 05-07-2017 IPR010985 Ribbon-helix-helix GO:0006355 AC028_RS22490 26f91cf454679ea55d21a6f055825aa5 84 Pfam PF09274 ParG 35 82 1.1E-5 T 05-07-2017 IPR015354 DNA partition complex, ParG AC028_RS22490 26f91cf454679ea55d21a6f055825aa5 84 Gene3D G3DSA:1.10.1220.10 4 82 6.0E-17 T 05-07-2017 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AC028_RS16440 05146bb9dea59676140fb2a2609a0ff9 36 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 7 31 2.9E-6 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS16440 05146bb9dea59676140fb2a2609a0ff9 36 Gene3D G3DSA:1.20.140.10 7 35 3.4E-8 T 05-07-2017 AC028_RS16440 05146bb9dea59676140fb2a2609a0ff9 36 SUPERFAMILY SSF47203 7 35 3.87E-6 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS06175 4cd63860b74a605d1ccc82fa31bef042 158 SMART SM00347 43 143 4.0E-14 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS06175 4cd63860b74a605d1ccc82fa31bef042 158 Pfam PF12802 MarR family 49 106 1.4E-9 T 05-07-2017 AC028_RS06175 4cd63860b74a605d1ccc82fa31bef042 158 SUPERFAMILY SSF46785 17 153 1.62E-25 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS06175 4cd63860b74a605d1ccc82fa31bef042 158 Gene3D G3DSA:1.10.10.10 18 153 4.5E-26 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS12075 ac86f1e142199991f71f6052ec364f9b 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 9 199 6.0E-106 T 05-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AC028_RS12075 ac86f1e142199991f71f6052ec364f9b 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 119 132 - T 05-07-2017 IPR033135 ClpP, histidine active site AC028_RS12075 ac86f1e142199991f71f6052ec364f9b 208 PRINTS PR00127 Clp protease catalytic subunit P signature 26 41 4.0E-52 T 05-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AC028_RS12075 ac86f1e142199991f71f6052ec364f9b 208 PRINTS PR00127 Clp protease catalytic subunit P signature 175 194 4.0E-52 T 05-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AC028_RS12075 ac86f1e142199991f71f6052ec364f9b 208 PRINTS PR00127 Clp protease catalytic subunit P signature 66 86 4.0E-52 T 05-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AC028_RS12075 ac86f1e142199991f71f6052ec364f9b 208 PRINTS PR00127 Clp protease catalytic subunit P signature 97 114 4.0E-52 T 05-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AC028_RS12075 ac86f1e142199991f71f6052ec364f9b 208 PRINTS PR00127 Clp protease catalytic subunit P signature 118 137 4.0E-52 T 05-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AC028_RS12075 ac86f1e142199991f71f6052ec364f9b 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 97 108 - T 05-07-2017 IPR018215 ClpP, Ser active site AC028_RS12075 ac86f1e142199991f71f6052ec364f9b 208 Gene3D G3DSA:3.90.226.10 10 199 3.3E-88 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS12075 ac86f1e142199991f71f6052ec364f9b 208 Pfam PF00574 Clp protease 19 199 5.4E-87 T 05-07-2017 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AC028_RS12075 ac86f1e142199991f71f6052ec364f9b 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 10 200 44.124 T 05-07-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AC028_RS12075 ac86f1e142199991f71f6052ec364f9b 208 SUPERFAMILY SSF52096 10 199 1.03E-72 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS03310 edfbb6e1e6c9e8cda15c3a59d615d5e9 490 SUPERFAMILY SSF52949 4 179 4.18E-39 T 05-07-2017 AC028_RS03310 edfbb6e1e6c9e8cda15c3a59d615d5e9 490 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 5 490 35.474 T 05-07-2017 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AC028_RS03310 edfbb6e1e6c9e8cda15c3a59d615d5e9 490 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 342 349 - T 05-07-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AC028_RS03310 edfbb6e1e6c9e8cda15c3a59d615d5e9 490 PRINTS PR00481 Cytosol aminopeptidase signature 366 381 3.8E-50 T 05-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AC028_RS03310 edfbb6e1e6c9e8cda15c3a59d615d5e9 490 PRINTS PR00481 Cytosol aminopeptidase signature 338 358 3.8E-50 T 05-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AC028_RS03310 edfbb6e1e6c9e8cda15c3a59d615d5e9 490 PRINTS PR00481 Cytosol aminopeptidase signature 279 300 3.8E-50 T 05-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AC028_RS03310 edfbb6e1e6c9e8cda15c3a59d615d5e9 490 PRINTS PR00481 Cytosol aminopeptidase signature 316 337 3.8E-50 T 05-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AC028_RS03310 edfbb6e1e6c9e8cda15c3a59d615d5e9 490 PRINTS PR00481 Cytosol aminopeptidase signature 257 274 3.8E-50 T 05-07-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AC028_RS03310 edfbb6e1e6c9e8cda15c3a59d615d5e9 490 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 181 481 1.2E-114 T 05-07-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AC028_RS03310 edfbb6e1e6c9e8cda15c3a59d615d5e9 490 SUPERFAMILY SSF53187 175 488 9.73E-119 T 05-07-2017 AC028_RS03310 edfbb6e1e6c9e8cda15c3a59d615d5e9 490 Gene3D G3DSA:3.40.220.10 4 160 1.4E-47 T 05-07-2017 AC028_RS03310 edfbb6e1e6c9e8cda15c3a59d615d5e9 490 Gene3D G3DSA:3.40.630.10 168 488 3.5E-132 T 05-07-2017 AC028_RS03310 edfbb6e1e6c9e8cda15c3a59d615d5e9 490 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 21 145 2.2E-29 T 05-07-2017 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AC028_RS18610 638260dbb86bf30808698c883ca2a8b4 372 PRINTS PR01010 Flagellar P-ring protein signature 169 187 2.1E-77 T 05-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AC028_RS18610 638260dbb86bf30808698c883ca2a8b4 372 PRINTS PR01010 Flagellar P-ring protein signature 28 43 2.1E-77 T 05-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AC028_RS18610 638260dbb86bf30808698c883ca2a8b4 372 PRINTS PR01010 Flagellar P-ring protein signature 63 78 2.1E-77 T 05-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AC028_RS18610 638260dbb86bf30808698c883ca2a8b4 372 PRINTS PR01010 Flagellar P-ring protein signature 43 58 2.1E-77 T 05-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AC028_RS18610 638260dbb86bf30808698c883ca2a8b4 372 PRINTS PR01010 Flagellar P-ring protein signature 111 128 2.1E-77 T 05-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AC028_RS18610 638260dbb86bf30808698c883ca2a8b4 372 PRINTS PR01010 Flagellar P-ring protein signature 195 213 2.1E-77 T 05-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AC028_RS18610 638260dbb86bf30808698c883ca2a8b4 372 PRINTS PR01010 Flagellar P-ring protein signature 89 108 2.1E-77 T 05-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AC028_RS18610 638260dbb86bf30808698c883ca2a8b4 372 PRINTS PR01010 Flagellar P-ring protein signature 259 271 2.1E-77 T 05-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AC028_RS18610 638260dbb86bf30808698c883ca2a8b4 372 PRINTS PR01010 Flagellar P-ring protein signature 128 146 2.1E-77 T 05-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AC028_RS18610 638260dbb86bf30808698c883ca2a8b4 372 Pfam PF02119 Flagellar P-ring protein 28 371 4.3E-135 T 05-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AC028_RS18610 638260dbb86bf30808698c883ca2a8b4 372 Hamap MF_00416 Flagellar P-ring protein [flgI]. 9 372 37.984 T 05-07-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AC028_RS04595 42027f0c827f4dda109b5d3109913935 353 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 24 344 6.8E-67 T 05-07-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AC028_RS04595 42027f0c827f4dda109b5d3109913935 353 Gene3D G3DSA:1.20.1510.10 26 157 1.2E-52 T 05-07-2017 IPR027469 Cation efflux protein transmembrane domain AC028_RS04595 42027f0c827f4dda109b5d3109913935 353 Gene3D G3DSA:1.20.1510.10 208 271 1.2E-52 T 05-07-2017 IPR027469 Cation efflux protein transmembrane domain AC028_RS04595 42027f0c827f4dda109b5d3109913935 353 SUPERFAMILY SSF161111 22 153 9.15E-52 T 05-07-2017 AC028_RS04595 42027f0c827f4dda109b5d3109913935 353 SUPERFAMILY SSF161111 204 272 9.15E-52 T 05-07-2017 AC028_RS04595 42027f0c827f4dda109b5d3109913935 353 Pfam PF01545 Cation efflux family 30 271 2.6E-39 T 05-07-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AC028_RS09850 c1e7173d21e015ccb2dba79eb154a3c6 697 Pfam PF00326 Prolyl oligopeptidase family 494 695 1.8E-48 T 05-07-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AC028_RS09850 c1e7173d21e015ccb2dba79eb154a3c6 697 Gene3D G3DSA:3.40.50.1820 359 695 6.8E-91 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS09850 c1e7173d21e015ccb2dba79eb154a3c6 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 555 575 1.1E-42 T 05-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AC028_RS09850 c1e7173d21e015ccb2dba79eb154a3c6 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 609 624 1.1E-42 T 05-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AC028_RS09850 c1e7173d21e015ccb2dba79eb154a3c6 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 628 650 1.1E-42 T 05-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AC028_RS09850 c1e7173d21e015ccb2dba79eb154a3c6 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 470 488 1.1E-42 T 05-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AC028_RS09850 c1e7173d21e015ccb2dba79eb154a3c6 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 497 521 1.1E-42 T 05-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AC028_RS09850 c1e7173d21e015ccb2dba79eb154a3c6 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 525 544 1.1E-42 T 05-07-2017 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AC028_RS09850 c1e7173d21e015ccb2dba79eb154a3c6 697 SUPERFAMILY SSF50993 27 420 8.89E-59 T 05-07-2017 AC028_RS09850 c1e7173d21e015ccb2dba79eb154a3c6 697 Gene3D G3DSA:2.130.10.120 87 238 6.7E-4 T 05-07-2017 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AC028_RS09850 c1e7173d21e015ccb2dba79eb154a3c6 697 SUPERFAMILY SSF53474 440 695 8.4E-53 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS09850 c1e7173d21e015ccb2dba79eb154a3c6 697 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 26 246 1.6E-26 T 05-07-2017 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AC028_RS01995 4a82441dcf44d8170ac6e67e31dba88d 594 Gene3D G3DSA:2.40.128.130 320 571 1.1E-45 T 05-07-2017 IPR005546 Autotransporter beta-domain AC028_RS01995 4a82441dcf44d8170ac6e67e31dba88d 594 Pfam PF03797 Autotransporter beta-domain 330 566 2.6E-44 T 05-07-2017 IPR005546 Autotransporter beta-domain AC028_RS01995 4a82441dcf44d8170ac6e67e31dba88d 594 Gene3D G3DSA:3.40.50.1110 6 294 4.0E-74 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS01995 4a82441dcf44d8170ac6e67e31dba88d 594 SUPERFAMILY SSF52266 22 228 1.83E-15 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS01995 4a82441dcf44d8170ac6e67e31dba88d 594 SUPERFAMILY SSF52266 257 292 1.83E-15 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS01995 4a82441dcf44d8170ac6e67e31dba88d 594 SUPERFAMILY SSF103515 323 563 1.96E-33 T 05-07-2017 IPR005546 Autotransporter beta-domain AC028_RS01995 4a82441dcf44d8170ac6e67e31dba88d 594 PIRSF PIRSF037375 1 594 5.3E-203 T 05-07-2017 IPR017186 Lipase, autotransporter EstA AC028_RS01995 4a82441dcf44d8170ac6e67e31dba88d 594 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 22 286 1.6E-9 T 05-07-2017 IPR001087 GDSL lipase/esterase GO:0016788 AC028_RS01995 4a82441dcf44d8170ac6e67e31dba88d 594 SMART SM00869 327 584 1.3E-33 T 05-07-2017 IPR005546 Autotransporter beta-domain AC028_RS03205 3b742d5655dbde3f41f5fc407a8241d4 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 17 42 1.2E-10 T 05-07-2017 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AC028_RS03205 3b742d5655dbde3f41f5fc407a8241d4 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 53 71 1.2E-10 T 05-07-2017 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AC028_RS03205 3b742d5655dbde3f41f5fc407a8241d4 143 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 17 142 2.6E-28 T 05-07-2017 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 AC028_RS03205 3b742d5655dbde3f41f5fc407a8241d4 143 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS03205 3b742d5655dbde3f41f5fc407a8241d4 143 Pfam PF08334 Type II secretion system (T2SS), protein G 40 142 1.2E-28 T 05-07-2017 IPR013545 Type II secretion system protein G AC028_RS03205 3b742d5655dbde3f41f5fc407a8241d4 143 SUPERFAMILY SSF54523 45 141 7.32E-24 T 05-07-2017 AC028_RS03205 3b742d5655dbde3f41f5fc407a8241d4 143 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 37 6.2E-4 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS15965 5ef968ff5dd26f7cb0ba8512f48dd18c 363 SUPERFAMILY SSF52540 113 326 1.11E-46 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS15965 5ef968ff5dd26f7cb0ba8512f48dd18c 363 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 38 334 31.414 T 05-07-2017 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 AC028_RS15965 5ef968ff5dd26f7cb0ba8512f48dd18c 363 Gene3D G3DSA:3.40.50.300 114 268 3.3E-40 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS15965 5ef968ff5dd26f7cb0ba8512f48dd18c 363 Gene3D G3DSA:1.10.40.50 278 337 4.4E-20 T 05-07-2017 AC028_RS15965 5ef968ff5dd26f7cb0ba8512f48dd18c 363 Pfam PF03193 Protein of unknown function, DUF258 96 269 2.0E-47 T 05-07-2017 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 AC028_RS15965 5ef968ff5dd26f7cb0ba8512f48dd18c 363 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 85 326 4.0E-44 T 05-07-2017 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 AC028_RS17655 5406f0def2a106acd1414b83dcf55178 520 Pfam PF00474 Sodium:solute symporter family 39 439 4.9E-70 T 05-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AC028_RS17655 5406f0def2a106acd1414b83dcf55178 520 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 39 439 4.2E-106 T 05-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AC028_RS00725 e7b549248b0a44f11354b3f4b4df2876 457 SUPERFAMILY SSF103473 256 455 2.75E-37 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS00725 e7b549248b0a44f11354b3f4b4df2876 457 SUPERFAMILY SSF103473 24 210 2.75E-37 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS00725 e7b549248b0a44f11354b3f4b4df2876 457 Pfam PF07690 Major Facilitator Superfamily 37 357 2.2E-26 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS00725 e7b549248b0a44f11354b3f4b4df2876 457 Gene3D G3DSA:1.20.1250.20 277 453 1.4E-8 T 05-07-2017 AC028_RS00725 e7b549248b0a44f11354b3f4b4df2876 457 Gene3D G3DSA:1.20.1250.20 32 206 8.4E-22 T 05-07-2017 AC028_RS00725 e7b549248b0a44f11354b3f4b4df2876 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 407 426 1.2E-5 T 05-07-2017 AC028_RS00725 e7b549248b0a44f11354b3f4b4df2876 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 152 176 1.2E-5 T 05-07-2017 AC028_RS00725 e7b549248b0a44f11354b3f4b4df2876 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 122 142 1.2E-5 T 05-07-2017 AC028_RS16240 8509e98dc805966797a38386937aaaaf 299 SUPERFAMILY SSF46785 4 115 2.29E-25 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS16240 8509e98dc805966797a38386937aaaaf 299 Gene3D G3DSA:3.40.190.10 94 180 3.3E-17 T 05-07-2017 AC028_RS16240 8509e98dc805966797a38386937aaaaf 299 Pfam PF03466 LysR substrate binding domain 93 298 2.5E-42 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS16240 8509e98dc805966797a38386937aaaaf 299 SUPERFAMILY SSF53850 93 299 1.71E-39 T 05-07-2017 AC028_RS16240 8509e98dc805966797a38386937aaaaf 299 Gene3D G3DSA:1.10.10.10 7 84 8.8E-26 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS16240 8509e98dc805966797a38386937aaaaf 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.6E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS16240 8509e98dc805966797a38386937aaaaf 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.6E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS16240 8509e98dc805966797a38386937aaaaf 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.6E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS16240 8509e98dc805966797a38386937aaaaf 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 7.9E-23 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS16240 8509e98dc805966797a38386937aaaaf 299 Gene3D G3DSA:3.40.190.10 181 271 1.9E-20 T 05-07-2017 AC028_RS07880 d19fd3049c42911d74e7500cfc73f88e 478 Pfam PF13454 FAD-NAD(P)-binding 16 158 3.8E-24 T 05-07-2017 AC028_RS07880 d19fd3049c42911d74e7500cfc73f88e 478 Pfam PF00890 FAD binding domain 404 433 4.3E-5 T 05-07-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AC028_RS07880 d19fd3049c42911d74e7500cfc73f88e 478 SUPERFAMILY SSF51905 10 226 2.59E-15 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS07880 d19fd3049c42911d74e7500cfc73f88e 478 SUPERFAMILY SSF51905 195 279 2.69E-7 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS07880 d19fd3049c42911d74e7500cfc73f88e 478 SUPERFAMILY SSF51905 312 454 2.69E-7 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS07880 d19fd3049c42911d74e7500cfc73f88e 478 Gene3D G3DSA:3.50.50.60 7 205 1.6E-9 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS07880 d19fd3049c42911d74e7500cfc73f88e 478 Gene3D G3DSA:3.50.50.60 206 240 2.1E-6 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS07880 d19fd3049c42911d74e7500cfc73f88e 478 Gene3D G3DSA:3.50.50.60 311 458 2.1E-6 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS03575 8831bfff5ea6f52149266890a241d840 245 SUPERFAMILY SSF101082 31 207 9.15E-5 T 05-07-2017 IPR023220 Type IV secretion system, VirB5-domain AC028_RS03575 8831bfff5ea6f52149266890a241d840 245 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 4 243 1.8E-73 T 05-07-2017 IPR014147 Type IV conjugative transfer protein TrbJ AC028_RS06680 847ef612ab2a8d09835ee0fe1c8ffecd 368 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 84 6.2E-12 T 05-07-2017 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AC028_RS06335 4be5a18476369ab9a176938fd7fba853 301 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 71 224 6.2E-48 T 05-07-2017 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 AC028_RS06335 4be5a18476369ab9a176938fd7fba853 301 SUPERFAMILY SSF51197 81 230 2.25E-21 T 05-07-2017 AC028_RS06335 4be5a18476369ab9a176938fd7fba853 301 Gene3D G3DSA:2.60.120.330 124 224 5.3E-17 T 05-07-2017 IPR027443 Isopenicillin N synthase-like AC028_RS05360 5e18170f362aa7a45d6b38bab337e16e 487 ProSitePatterns PS01219 Ammonium transporters signature. 242 267 - T 05-07-2017 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AC028_RS05360 5e18170f362aa7a45d6b38bab337e16e 487 TIGRFAM TIGR00836 amt: ammonium transporter 84 485 7.1E-130 T 05-07-2017 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AC028_RS05360 5e18170f362aa7a45d6b38bab337e16e 487 Pfam PF00909 Ammonium Transporter Family 86 485 4.1E-118 T 05-07-2017 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AC028_RS05360 5e18170f362aa7a45d6b38bab337e16e 487 Gene3D G3DSA:1.10.3430.10 78 466 8.7E-135 T 05-07-2017 IPR029020 Ammonium/urea transporter AC028_RS05360 5e18170f362aa7a45d6b38bab337e16e 487 SUPERFAMILY SSF111352 80 466 1.02E-122 T 05-07-2017 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AC028_RS05360 5e18170f362aa7a45d6b38bab337e16e 487 PRINTS PR00342 Rhesus blood group protein signature 312 334 2.3E-6 T 05-07-2017 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AC028_RS05360 5e18170f362aa7a45d6b38bab337e16e 487 PRINTS PR00342 Rhesus blood group protein signature 185 201 2.3E-6 T 05-07-2017 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AC028_RS05360 5e18170f362aa7a45d6b38bab337e16e 487 PRINTS PR00342 Rhesus blood group protein signature 281 299 2.3E-6 T 05-07-2017 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AC028_RS05360 5e18170f362aa7a45d6b38bab337e16e 487 PRINTS PR00342 Rhesus blood group protein signature 367 385 2.3E-6 T 05-07-2017 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AC028_RS09005 2bfc0e33697fbb61ab3e569297033e11 320 SMART SM01126 137 285 6.9E-49 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS09005 2bfc0e33697fbb61ab3e569297033e11 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 5.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS09005 2bfc0e33697fbb61ab3e569297033e11 320 Pfam PF12762 ISXO2-like transposase domain 138 285 6.0E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS22160 17985aa8e340262cc9df21670b53d050 404 Gene3D G3DSA:2.40.50.100 68 99 1.6E-23 T 05-07-2017 AC028_RS22160 17985aa8e340262cc9df21670b53d050 404 Gene3D G3DSA:2.40.50.100 174 209 1.6E-23 T 05-07-2017 AC028_RS22160 17985aa8e340262cc9df21670b53d050 404 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 295 6.2E-12 T 05-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_RS22160 17985aa8e340262cc9df21670b53d050 404 SUPERFAMILY SSF111369 52 302 1.83E-87 T 05-07-2017 AC028_RS22160 17985aa8e340262cc9df21670b53d050 404 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 377 3.7E-83 T 05-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AC028_RS13165 a489eb69d9b74702fa6d4f077688a9a4 194 Gene3D G3DSA:3.40.50.180 7 192 5.8E-64 T 05-07-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AC028_RS13165 a489eb69d9b74702fa6d4f077688a9a4 194 Pfam PF01339 CheB methylesterase 13 188 2.2E-54 T 05-07-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AC028_RS13165 a489eb69d9b74702fa6d4f077688a9a4 194 SUPERFAMILY SSF52738 9 192 2.22E-55 T 05-07-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AC028_RS20210 f32ee4f84e6807340794d36de6067196 162 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 8 141 1.9E-30 T 05-07-2017 AC028_RS20210 f32ee4f84e6807340794d36de6067196 162 SUPERFAMILY SSF50475 6 135 3.49E-24 T 05-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 AC028_RS20210 f32ee4f84e6807340794d36de6067196 162 Gene3D G3DSA:2.30.110.10 5 155 1.2E-49 T 05-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 AC028_RS14990 88985145d4f6020fce0d965f4fe5c248 160 SMART SM00065 31 160 0.0047 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS14990 88985145d4f6020fce0d965f4fe5c248 160 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 98 115 - T 05-07-2017 IPR000614 Free Met sulfoxide reductase conserved site AC028_RS14990 88985145d4f6020fce0d965f4fe5c248 160 Pfam PF13185 GAF domain 51 159 1.5E-11 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS14990 88985145d4f6020fce0d965f4fe5c248 160 Gene3D G3DSA:3.30.450.40 12 155 2.0E-50 T 05-07-2017 IPR029016 GAF domain-like AC028_RS14990 88985145d4f6020fce0d965f4fe5c248 160 SUPERFAMILY SSF55781 13 159 3.34E-42 T 05-07-2017 IPR029016 GAF domain-like AC028_RS07125 64c800f48cd58ecccea81dc0d6b9b8bf 507 Pfam PF13180 PDZ domain 111 188 1.4E-13 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS07125 64c800f48cd58ecccea81dc0d6b9b8bf 507 Gene3D G3DSA:2.30.42.10 117 190 2.0E-23 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS07125 64c800f48cd58ecccea81dc0d6b9b8bf 507 Gene3D G3DSA:3.90.226.10 191 373 6.8E-64 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS07125 64c800f48cd58ecccea81dc0d6b9b8bf 507 SUPERFAMILY SSF52096 200 375 4.47E-75 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS07125 64c800f48cd58ecccea81dc0d6b9b8bf 507 SUPERFAMILY SSF52096 50 129 4.47E-75 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS07125 64c800f48cd58ecccea81dc0d6b9b8bf 507 SMART SM00228 110 179 9.1E-10 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS07125 64c800f48cd58ecccea81dc0d6b9b8bf 507 SUPERFAMILY SSF50156 105 191 2.52E-15 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS07125 64c800f48cd58ecccea81dc0d6b9b8bf 507 Pfam PF03572 Peptidase family S41 207 368 6.5E-55 T 05-07-2017 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AC028_RS07125 64c800f48cd58ecccea81dc0d6b9b8bf 507 SMART SM00245 181 371 3.2E-70 T 05-07-2017 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AC028_RS07125 64c800f48cd58ecccea81dc0d6b9b8bf 507 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 63 371 4.1E-95 T 05-07-2017 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AC028_RS07125 64c800f48cd58ecccea81dc0d6b9b8bf 507 Gene3D G3DSA:3.30.750.44 59 116 4.4E-7 T 05-07-2017 AC028_RS13915 f1059ab0815421d6c792bf78403d8940 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 75 2.0E-14 T 05-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AC028_RS13915 f1059ab0815421d6c792bf78403d8940 202 SUPERFAMILY SSF47616 76 197 2.09E-27 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS13915 f1059ab0815421d6c792bf78403d8940 202 Gene3D G3DSA:1.20.1050.10 83 198 9.7E-30 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS13915 f1059ab0815421d6c792bf78403d8940 202 Gene3D G3DSA:3.40.30.10 1 82 4.7E-23 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS13915 f1059ab0815421d6c792bf78403d8940 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 107 191 3.4E-7 T 05-07-2017 IPR004046 Glutathione S-transferase, C-terminal AC028_RS13915 f1059ab0815421d6c792bf78403d8940 202 SUPERFAMILY SSF52833 2 76 5.95E-21 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS06185 885c652efd9e1459fe57f35658292ba5 255 SUPERFAMILY SSF51735 6 252 1.5E-46 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS06185 885c652efd9e1459fe57f35658292ba5 255 Pfam PF00106 short chain dehydrogenase 6 121 6.3E-13 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06185 885c652efd9e1459fe57f35658292ba5 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 4.0E-24 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06185 885c652efd9e1459fe57f35658292ba5 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 104 120 4.0E-24 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06185 885c652efd9e1459fe57f35658292ba5 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.0E-24 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06185 885c652efd9e1459fe57f35658292ba5 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 4.0E-24 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06185 885c652efd9e1459fe57f35658292ba5 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 4.0E-24 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06185 885c652efd9e1459fe57f35658292ba5 255 Gene3D G3DSA:3.40.50.720 6 250 1.7E-47 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS06185 885c652efd9e1459fe57f35658292ba5 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 152 250 2.2E-14 T 05-07-2017 AC028_RS05195 4dd041b99577e731643c55f984c4859e 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 1.3E-12 T 05-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AC028_RS05195 4dd041b99577e731643c55f984c4859e 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 1.3E-12 T 05-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AC028_RS05195 4dd041b99577e731643c55f984c4859e 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 1.3E-12 T 05-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AC028_RS05195 4dd041b99577e731643c55f984c4859e 160 Gene3D G3DSA:1.10.10.10 5 58 2.8E-22 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS05195 4dd041b99577e731643c55f984c4859e 160 SUPERFAMILY SSF46785 6 66 9.54E-16 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS05195 4dd041b99577e731643c55f984c4859e 160 Gene3D G3DSA:3.30.70.920 60 144 4.2E-33 T 05-07-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AC028_RS05195 4dd041b99577e731643c55f984c4859e 160 Pfam PF01037 Lrp/AsnC ligand binding domain 73 147 4.1E-23 T 05-07-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AC028_RS05195 4dd041b99577e731643c55f984c4859e 160 SMART SM00344 7 116 7.6E-32 T 05-07-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AC028_RS05195 4dd041b99577e731643c55f984c4859e 160 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 05-07-2017 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AC028_RS05195 4dd041b99577e731643c55f984c4859e 160 SUPERFAMILY SSF54909 67 156 4.96E-22 T 05-07-2017 IPR011008 Dimeric alpha-beta barrel AC028_RS05195 4dd041b99577e731643c55f984c4859e 160 Pfam PF13404 AsnC-type helix-turn-helix domain 7 48 8.2E-16 T 05-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AC028_RS06830 30b29c370c17fb5081763833fbdd2763 185 Gene3D G3DSA:3.40.630.30 27 168 1.9E-21 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS06830 30b29c370c17fb5081763833fbdd2763 185 Pfam PF00583 Acetyltransferase (GNAT) family 102 163 1.1E-11 T 05-07-2017 IPR000182 GNAT domain GO:0008080 AC028_RS06830 30b29c370c17fb5081763833fbdd2763 185 SUPERFAMILY SSF55729 26 164 5.91E-23 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS10020 9db92f2e922fc93f901ea1771ff0ee1f 463 Pfam PF00295 Glycosyl hydrolases family 28 149 414 1.3E-44 T 05-07-2017 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 AC028_RS10020 9db92f2e922fc93f901ea1771ff0ee1f 463 SMART SM00710 224 250 1400.0 T 05-07-2017 IPR006626 Parallel beta-helix repeat AC028_RS10020 9db92f2e922fc93f901ea1771ff0ee1f 463 SMART SM00710 303 333 1000.0 T 05-07-2017 IPR006626 Parallel beta-helix repeat AC028_RS10020 9db92f2e922fc93f901ea1771ff0ee1f 463 SMART SM00710 277 297 190.0 T 05-07-2017 IPR006626 Parallel beta-helix repeat AC028_RS10020 9db92f2e922fc93f901ea1771ff0ee1f 463 SMART SM00710 251 272 52.0 T 05-07-2017 IPR006626 Parallel beta-helix repeat AC028_RS10020 9db92f2e922fc93f901ea1771ff0ee1f 463 SUPERFAMILY SSF51126 46 413 5.88E-60 T 05-07-2017 IPR011050 Pectin lyase fold/virulence factor AC028_RS10020 9db92f2e922fc93f901ea1771ff0ee1f 463 Gene3D G3DSA:2.160.20.10 52 417 1.9E-79 T 05-07-2017 IPR012334 Pectin lyase fold AC028_RS11955 3dd01e4ccdfc53f4a94d0a6bdb9bc13f 274 Pfam PF04305 Protein of unknown function (DUF455) 21 266 4.8E-99 T 05-07-2017 IPR007402 Protein of unknown function DUF455 AC028_RS11955 3dd01e4ccdfc53f4a94d0a6bdb9bc13f 274 PIRSF PIRSF012318 5 274 1.3E-106 T 05-07-2017 IPR011197 Uncharacterised conserved protein UCP012318 AC028_RS11955 3dd01e4ccdfc53f4a94d0a6bdb9bc13f 274 SUPERFAMILY SSF47240 63 270 4.43E-21 T 05-07-2017 IPR009078 Ferritin-like superfamily AC028_RS00480 7019f776a3af5fb6377e483da62fdae2 182 SUPERFAMILY SSF56784 16 178 1.44E-39 T 05-07-2017 IPR023214 HAD-like domain AC028_RS00480 7019f776a3af5fb6377e483da62fdae2 182 PIRSF PIRSF006118 7 181 6.4E-68 T 05-07-2017 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AC028_RS00480 7019f776a3af5fb6377e483da62fdae2 182 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 21 171 1.3E-37 T 05-07-2017 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AC028_RS00480 7019f776a3af5fb6377e483da62fdae2 182 Pfam PF08282 haloacid dehalogenase-like hydrolase 94 152 5.5E-7 T 05-07-2017 IPR023214 HAD-like domain AC028_RS00480 7019f776a3af5fb6377e483da62fdae2 182 Gene3D G3DSA:3.40.50.1000 11 176 1.8E-40 T 05-07-2017 IPR023214 HAD-like domain AC028_RS07870 358f2a8f59955800a106929af0dd1917 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 05-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AC028_RS07870 358f2a8f59955800a106929af0dd1917 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 248 2.9E-55 T 05-07-2017 AC028_RS07870 358f2a8f59955800a106929af0dd1917 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 6.0E-29 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07870 358f2a8f59955800a106929af0dd1917 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.0E-29 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07870 358f2a8f59955800a106929af0dd1917 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 6.0E-29 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07870 358f2a8f59955800a106929af0dd1917 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.0E-29 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07870 358f2a8f59955800a106929af0dd1917 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 6.0E-29 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07870 358f2a8f59955800a106929af0dd1917 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 6.0E-29 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07870 358f2a8f59955800a106929af0dd1917 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 7.2E-8 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07870 358f2a8f59955800a106929af0dd1917 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 7.2E-8 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07870 358f2a8f59955800a106929af0dd1917 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 7.2E-8 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07870 358f2a8f59955800a106929af0dd1917 252 Gene3D G3DSA:3.40.50.720 4 250 3.0E-73 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS07870 358f2a8f59955800a106929af0dd1917 252 SUPERFAMILY SSF51735 9 250 7.3E-72 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS18660 0e5816ea66911809d39ffd4ef08d0ec0 214 Pfam PF13144 Chaperone for flagella basal body P-ring formation 44 212 6.9E-42 T 05-07-2017 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AC028_RS18660 0e5816ea66911809d39ffd4ef08d0ec0 214 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 77 212 2.9E-41 T 05-07-2017 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AC028_RS18660 0e5816ea66911809d39ffd4ef08d0ec0 214 SMART SM00858 89 151 3.6E-8 T 05-07-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 AC028_RS20585 9b84bb26f195b188a2874ca5e6f80472 161 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 121 131 - T 05-07-2017 IPR020549 Endoribonuclease YbeY, conserved site AC028_RS20585 9b84bb26f195b188a2874ca5e6f80472 161 SUPERFAMILY SSF55486 24 157 1.0E-44 T 05-07-2017 AC028_RS20585 9b84bb26f195b188a2874ca5e6f80472 161 Pfam PF02130 Uncharacterized protein family UPF0054 27 150 1.1E-35 T 05-07-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AC028_RS20585 9b84bb26f195b188a2874ca5e6f80472 161 Gene3D G3DSA:3.40.390.30 24 158 1.5E-47 T 05-07-2017 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 AC028_RS20585 9b84bb26f195b188a2874ca5e6f80472 161 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 43 152 5.8E-37 T 05-07-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AC028_RS20585 9b84bb26f195b188a2874ca5e6f80472 161 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 7 155 23.746 T 05-07-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AC028_RS11435 6d36ba7ac677e87bd55506e993415150 157 Gene3D G3DSA:3.90.960.10 3 157 1.3E-47 T 05-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AC028_RS11435 6d36ba7ac677e87bd55506e993415150 157 PIRSF PIRSF006181 1 157 1.7E-40 T 05-07-2017 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AC028_RS11435 6d36ba7ac677e87bd55506e993415150 157 Pfam PF04073 Aminoacyl-tRNA editing domain 35 145 2.1E-22 T 05-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AC028_RS11435 6d36ba7ac677e87bd55506e993415150 157 SUPERFAMILY SSF55826 5 152 1.7E-37 T 05-07-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AC028_RS11435 6d36ba7ac677e87bd55506e993415150 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 5 156 3.5E-51 T 05-07-2017 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AC028_RS06575 9fbda63456f65b5fbfa71f683043af5a 709 SUPERFAMILY SSF53955 10 326 1.16E-91 T 05-07-2017 IPR023346 Lysozyme-like domain AC028_RS06575 9fbda63456f65b5fbfa71f683043af5a 709 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 24 323 4.6E-110 T 05-07-2017 IPR011970 Lytic murein transglycosylase AC028_RS06575 9fbda63456f65b5fbfa71f683043af5a 709 Gene3D G3DSA:1.10.101.10 330 390 1.4E-9 T 05-07-2017 IPR002477 Peptidoglycan binding-like AC028_RS06575 9fbda63456f65b5fbfa71f683043af5a 709 Pfam PF13406 Transglycosylase SLT domain 25 320 4.4E-98 T 05-07-2017 IPR031304 Transglycosylase SLT domain 2 AC028_RS06575 9fbda63456f65b5fbfa71f683043af5a 709 SUPERFAMILY SSF47090 325 387 2.04E-12 T 05-07-2017 IPR002477 Peptidoglycan binding-like AC028_RS06575 9fbda63456f65b5fbfa71f683043af5a 709 Pfam PF01471 Putative peptidoglycan binding domain 331 386 2.7E-9 T 05-07-2017 IPR002477 Peptidoglycan binding-like AC028_RS06575 9fbda63456f65b5fbfa71f683043af5a 709 Gene3D G3DSA:2.70.98.10 429 708 4.4E-75 T 05-07-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 AC028_RS06575 9fbda63456f65b5fbfa71f683043af5a 709 Gene3D G3DSA:1.10.530.10 206 325 4.5E-53 T 05-07-2017 AC028_RS06575 9fbda63456f65b5fbfa71f683043af5a 709 Gene3D G3DSA:1.10.530.10 68 125 4.5E-53 T 05-07-2017 AC028_RS06575 9fbda63456f65b5fbfa71f683043af5a 709 Pfam PF01263 Aldose 1-epimerase 445 706 1.2E-40 T 05-07-2017 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AC028_RS06575 9fbda63456f65b5fbfa71f683043af5a 709 SUPERFAMILY SSF74650 428 706 6.28E-62 T 05-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AC028_RS04050 7d425cbc19e435818a4f44523b2461f2 185 PRINTS PR01171 Bacterial lipocalin signature 164 174 1.5E-9 T 05-07-2017 IPR002446 Lipocalin, bacterial GO:0005215 AC028_RS04050 7d425cbc19e435818a4f44523b2461f2 185 PRINTS PR01171 Bacterial lipocalin signature 29 43 1.5E-9 T 05-07-2017 IPR002446 Lipocalin, bacterial GO:0005215 AC028_RS04050 7d425cbc19e435818a4f44523b2461f2 185 PRINTS PR01171 Bacterial lipocalin signature 66 75 1.5E-9 T 05-07-2017 IPR002446 Lipocalin, bacterial GO:0005215 AC028_RS04050 7d425cbc19e435818a4f44523b2461f2 185 PRINTS PR01171 Bacterial lipocalin signature 137 148 1.5E-9 T 05-07-2017 IPR002446 Lipocalin, bacterial GO:0005215 AC028_RS04050 7d425cbc19e435818a4f44523b2461f2 185 Pfam PF08212 Lipocalin-like domain 29 174 1.2E-52 T 05-07-2017 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AC028_RS04050 7d425cbc19e435818a4f44523b2461f2 185 PIRSF PIRSF036893 1 184 1.9E-55 T 05-07-2017 IPR022271 Lipocalin, ApoD type AC028_RS04050 7d425cbc19e435818a4f44523b2461f2 185 SUPERFAMILY SSF50814 20 177 1.25E-39 T 05-07-2017 IPR011038 Calycin-like AC028_RS04050 7d425cbc19e435818a4f44523b2461f2 185 ProSitePatterns PS00213 Lipocalin signature. 30 41 - T 05-07-2017 IPR022272 Lipocalin family conserved site AC028_RS04050 7d425cbc19e435818a4f44523b2461f2 185 Gene3D G3DSA:2.40.128.20 10 177 3.8E-49 T 05-07-2017 IPR012674 Calycin AC028_RS05860 7cc32268ef96b791ff33741938736e59 997 Pfam PF07715 TonB-dependent Receptor Plug Domain 130 235 5.3E-10 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS05860 7cc32268ef96b791ff33741938736e59 997 Gene3D G3DSA:2.170.130.10 109 241 7.0E-13 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS05860 7cc32268ef96b791ff33741938736e59 997 Gene3D G3DSA:2.40.170.20 461 506 2.0E-47 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS05860 7cc32268ef96b791ff33741938736e59 997 Gene3D G3DSA:2.40.170.20 242 427 2.0E-47 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS05860 7cc32268ef96b791ff33741938736e59 997 Gene3D G3DSA:2.40.170.20 550 634 2.0E-47 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS05860 7cc32268ef96b791ff33741938736e59 997 Gene3D G3DSA:2.40.170.20 669 996 2.0E-47 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS05860 7cc32268ef96b791ff33741938736e59 997 Pfam PF13620 Carboxypeptidase regulatory-like domain 38 106 3.0E-8 T 05-07-2017 AC028_RS05860 7cc32268ef96b791ff33741938736e59 997 SUPERFAMILY SSF49452 28 106 3.73E-5 T 05-07-2017 IPR013784 Carbohydrate-binding-like fold GO:0030246 AC028_RS05860 7cc32268ef96b791ff33741938736e59 997 SUPERFAMILY SSF56935 682 726 1.24E-66 T 05-07-2017 AC028_RS05860 7cc32268ef96b791ff33741938736e59 997 SUPERFAMILY SSF56935 921 997 1.24E-66 T 05-07-2017 AC028_RS05860 7cc32268ef96b791ff33741938736e59 997 SUPERFAMILY SSF56935 108 631 1.24E-66 T 05-07-2017 AC028_RS05860 7cc32268ef96b791ff33741938736e59 997 SUPERFAMILY SSF56935 770 892 1.24E-66 T 05-07-2017 AC028_RS02725 259e1605a791f674ec7079b9ece33325 764 SUPERFAMILY SSF56935 41 764 5.86E-88 T 05-07-2017 AC028_RS02725 259e1605a791f674ec7079b9ece33325 764 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 160 4.0E-10 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS02725 259e1605a791f674ec7079b9ece33325 764 Gene3D G3DSA:2.40.170.20 383 764 5.6E-77 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02725 259e1605a791f674ec7079b9ece33325 764 Gene3D G3DSA:2.40.170.20 171 350 5.6E-77 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02725 259e1605a791f674ec7079b9ece33325 764 Pfam PF00593 TonB dependent receptor 511 763 1.3E-29 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02725 259e1605a791f674ec7079b9ece33325 764 Gene3D G3DSA:2.170.130.10 62 170 1.8E-11 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS05565 c5580112621404c1613805c1701aaaf4 81 Gene3D G3DSA:3.40.50.20 10 33 7.9E-7 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS05565 c5580112621404c1613805c1701aaaf4 81 Pfam PF01820 D-ala D-ala ligase N-terminus 11 34 3.8E-6 T 05-07-2017 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS05565 c5580112621404c1613805c1701aaaf4 81 SUPERFAMILY SSF52440 10 37 3.84E-6 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS18940 935d38284e339eda5cfa5a361c926b86 194 SMART SM00479 10 183 9.3E-14 T 05-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III AC028_RS18940 935d38284e339eda5cfa5a361c926b86 194 SUPERFAMILY SSF53098 7 181 8.97E-46 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS18940 935d38284e339eda5cfa5a361c926b86 194 Hamap MF_00045 Oligoribonuclease [orn]. 6 184 41.096 T 05-07-2017 IPR022894 Oligoribonuclease GO:0016788 AC028_RS18940 935d38284e339eda5cfa5a361c926b86 194 Pfam PF00929 Exonuclease 12 173 1.3E-26 T 05-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III AC028_RS18940 935d38284e339eda5cfa5a361c926b86 194 Gene3D G3DSA:3.30.420.10 8 179 1.1E-68 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS12810 a19ccb90788117730a14df463554d162 417 Gene3D G3DSA:1.20.1250.20 213 400 3.0E-14 T 05-07-2017 AC028_RS12810 a19ccb90788117730a14df463554d162 417 Gene3D G3DSA:1.20.1250.20 12 195 7.4E-27 T 05-07-2017 AC028_RS12810 a19ccb90788117730a14df463554d162 417 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 369 2.8E-64 T 05-07-2017 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AC028_RS12810 a19ccb90788117730a14df463554d162 417 SUPERFAMILY SSF103473 3 400 7.06E-62 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS12810 a19ccb90788117730a14df463554d162 417 Pfam PF07690 Major Facilitator Superfamily 18 352 8.9E-44 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS15870 d37f91e2cca1db3b11e9a429b7c5a3b2 292 Gene3D G3DSA:3.90.176.10 116 280 2.3E-11 T 05-07-2017 AC028_RS15870 d37f91e2cca1db3b11e9a429b7c5a3b2 292 SUPERFAMILY SSF56399 110 286 3.74E-12 T 05-07-2017 AC028_RS15870 d37f91e2cca1db3b11e9a429b7c5a3b2 292 Pfam PF01129 NAD:arginine ADP-ribosyltransferase 110 280 8.8E-8 T 05-07-2017 IPR000768 NAD:arginine ADP-ribosyltransferase, ART GO:0003956|GO:0006471 AC028_RS13820 96c4e5aae56d0d09971a71f02c68543a 271 PIRSF PIRSF004750 1 271 2.6E-111 T 05-07-2017 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AC028_RS13820 96c4e5aae56d0d09971a71f02c68543a 271 TIGRFAM TIGR03138 QueF: queuine synthase 4 271 6.9E-113 T 05-07-2017 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AC028_RS13820 96c4e5aae56d0d09971a71f02c68543a 271 Gene3D G3DSA:3.30.1130.10 15 124 6.8E-40 T 05-07-2017 AC028_RS13820 96c4e5aae56d0d09971a71f02c68543a 271 Pfam PF14489 QueF-like protein 183 257 2.6E-27 T 05-07-2017 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AC028_RS13820 96c4e5aae56d0d09971a71f02c68543a 271 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 271 134.852 T 05-07-2017 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AC028_RS13820 96c4e5aae56d0d09971a71f02c68543a 271 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 15 123 1.3E-44 T 05-07-2017 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AC028_RS13820 96c4e5aae56d0d09971a71f02c68543a 271 SUPERFAMILY SSF55620 173 253 2.3E-9 T 05-07-2017 AC028_RS13820 96c4e5aae56d0d09971a71f02c68543a 271 Gene3D G3DSA:3.30.1130.10 135 261 6.8E-48 T 05-07-2017 AC028_RS02880 9c61f4ba46a8376d2cf5cfbb8ca4c1d7 357 SMART SM01329 4 353 2.1E-208 T 05-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AC028_RS02880 9c61f4ba46a8376d2cf5cfbb8ca4c1d7 357 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 352 1.9E-157 T 05-07-2017 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AC028_RS02880 9c61f4ba46a8376d2cf5cfbb8ca4c1d7 357 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 357 52.56 T 05-07-2017 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AC028_RS02880 9c61f4ba46a8376d2cf5cfbb8ca4c1d7 357 Gene3D G3DSA:3.40.718.10 2 357 1.3E-130 T 05-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AC028_RS02880 9c61f4ba46a8376d2cf5cfbb8ca4c1d7 357 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 353 1.6E-136 T 05-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AC028_RS02880 9c61f4ba46a8376d2cf5cfbb8ca4c1d7 357 SUPERFAMILY SSF53659 1 357 3.26E-124 T 05-07-2017 AC028_RS02880 9c61f4ba46a8376d2cf5cfbb8ca4c1d7 357 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 05-07-2017 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AC028_RS18770 3aacd741848e87e501703029324e0eac 457 Gene3D G3DSA:1.10.8.60 162 247 1.2E-14 T 05-07-2017 AC028_RS18770 3aacd741848e87e501703029324e0eac 457 SMART SM00382 58 174 9.3E-14 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS18770 3aacd741848e87e501703029324e0eac 457 Gene3D G3DSA:3.40.50.300 23 161 2.2E-31 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18770 3aacd741848e87e501703029324e0eac 457 Gene3D G3DSA:1.10.3710.10 355 450 1.6E-31 T 05-07-2017 AC028_RS18770 3aacd741848e87e501703029324e0eac 457 SUPERFAMILY SSF48019 258 440 3.61E-69 T 05-07-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AC028_RS18770 3aacd741848e87e501703029324e0eac 457 SUPERFAMILY SSF52540 22 242 4.3E-46 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18770 3aacd741848e87e501703029324e0eac 457 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 62 170 3.0E-14 T 05-07-2017 IPR003959 ATPase, AAA-type, core GO:0005524 AC028_RS18770 3aacd741848e87e501703029324e0eac 457 Pfam PF12002 MgsA AAA+ ATPase C terminal 275 440 1.3E-62 T 05-07-2017 IPR021886 MgsA AAA+ ATPase C-terminal AC028_RS18770 3aacd741848e87e501703029324e0eac 457 Pfam PF16193 AAA C-terminal domain 197 273 7.5E-22 T 05-07-2017 IPR032423 AAA ATPase, C-terminal domain AC028_RS18770 3aacd741848e87e501703029324e0eac 457 Gene3D G3DSA:1.20.272.10 255 353 1.1E-41 T 05-07-2017 AC028_RS18490 5f426162c38bc88f107a0bc9a67be3c9 207 SUPERFAMILY SSF51161 53 189 7.62E-25 T 05-07-2017 IPR011004 Trimeric LpxA-like AC028_RS18490 5f426162c38bc88f107a0bc9a67be3c9 207 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 131 5.6E-5 T 05-07-2017 IPR001451 Hexapeptide repeat AC028_RS18490 5f426162c38bc88f107a0bc9a67be3c9 207 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 134 167 2.7E-6 T 05-07-2017 IPR001451 Hexapeptide repeat AC028_RS18490 5f426162c38bc88f107a0bc9a67be3c9 207 Gene3D G3DSA:2.160.10.10 87 178 2.9E-20 T 05-07-2017 AC028_RS06205 73eddc1cc328cd3f73d14ad629f079f1 170 Gene3D G3DSA:3.10.450.50 48 157 5.3E-9 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS06205 73eddc1cc328cd3f73d14ad629f079f1 170 Pfam PF12680 SnoaL-like domain 53 155 5.8E-11 T 05-07-2017 IPR009959 Polyketide cyclase SnoaL-like domain AC028_RS06205 73eddc1cc328cd3f73d14ad629f079f1 170 SUPERFAMILY SSF54427 44 157 1.76E-21 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS18825 e30331aceb18a71842be286b364375c8 406 SMART SM00564 342 373 44.0 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS18825 e30331aceb18a71842be286b364375c8 406 SMART SM00564 263 294 480.0 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS18825 e30331aceb18a71842be286b364375c8 406 SMART SM00564 126 158 0.015 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS18825 e30331aceb18a71842be286b364375c8 406 SMART SM00564 167 198 0.29 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS18825 e30331aceb18a71842be286b364375c8 406 SMART SM00564 300 332 34.0 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS18825 e30331aceb18a71842be286b364375c8 406 SMART SM00564 211 243 0.21 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS18825 e30331aceb18a71842be286b364375c8 406 SMART SM00564 77 108 5.1E-5 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS18825 e30331aceb18a71842be286b364375c8 406 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 6 404 38.709 T 05-07-2017 IPR017687 Outer membrane protein assembly factor BamB AC028_RS18825 e30331aceb18a71842be286b364375c8 406 SUPERFAMILY SSF50998 43 396 1.86E-78 T 05-07-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AC028_RS18825 e30331aceb18a71842be286b364375c8 406 Gene3D G3DSA:2.140.10.10 9 404 1.6E-68 T 05-07-2017 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AC028_RS18825 e30331aceb18a71842be286b364375c8 406 Pfam PF13360 PQQ-like domain 58 115 4.2E-5 T 05-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat AC028_RS18825 e30331aceb18a71842be286b364375c8 406 Pfam PF13360 PQQ-like domain 120 331 1.0E-43 T 05-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat AC028_RS18825 e30331aceb18a71842be286b364375c8 406 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 9 403 1.7E-131 T 05-07-2017 IPR017687 Outer membrane protein assembly factor BamB AC028_RS10755 d056352cfc1584e74b2166987dc8b520 234 Gene3D G3DSA:3.40.50.300 5 188 1.7E-5 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10755 d056352cfc1584e74b2166987dc8b520 234 SUPERFAMILY SSF52540 5 192 3.15E-23 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10600 7e8622a37759ec7249e13d00ec05d240 87 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 4 85 3.0E-21 T 05-07-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AC028_RS10600 7e8622a37759ec7249e13d00ec05d240 87 Hamap MF_00910 Cell division protein FtsL [ftsL]. 2 85 15.553 T 05-07-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AC028_RS10600 7e8622a37759ec7249e13d00ec05d240 87 Pfam PF04999 Cell division protein FtsL 5 87 1.6E-24 T 05-07-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AC028_RS15250 ba0cfa799a4dcd500a07d5ded4674375 198 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 14 190 4.6E-38 T 05-07-2017 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AC028_RS15250 ba0cfa799a4dcd500a07d5ded4674375 198 SUPERFAMILY SSF51197 5 192 2.2E-63 T 05-07-2017 AC028_RS15250 ba0cfa799a4dcd500a07d5ded4674375 198 Gene3D G3DSA:2.60.120.590 13 192 9.3E-42 T 05-07-2017 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AC028_RS00420 158c970ddd195c4bed14e6cfa258e72c 233 Pfam PF00308 Bacterial dnaA protein 18 201 4.3E-5 T 05-07-2017 IPR013317 Chromosomal replication initiator protein DnaA AC028_RS00420 158c970ddd195c4bed14e6cfa258e72c 233 SUPERFAMILY SSF52540 13 209 3.95E-24 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS00420 158c970ddd195c4bed14e6cfa258e72c 233 Gene3D G3DSA:1.10.8.60 164 229 4.8E-23 T 05-07-2017 AC028_RS00420 158c970ddd195c4bed14e6cfa258e72c 233 Gene3D G3DSA:3.40.50.300 4 156 1.2E-31 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS00420 158c970ddd195c4bed14e6cfa258e72c 233 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 5 229 8.1E-70 T 05-07-2017 IPR017788 DnaA regulatory inactivator Hda GO:0032297 AC028_RS13245 6096418ce3b023f357bc5c5ad8630831 135 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 6 118 27.912 T 05-07-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS13245 6096418ce3b023f357bc5c5ad8630831 135 PIRSF PIRSF002191 1 135 6.8E-48 T 05-07-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS13245 6096418ce3b023f357bc5c5ad8630831 135 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 8 117 6.6E-44 T 05-07-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS13245 6096418ce3b023f357bc5c5ad8630831 135 SUPERFAMILY SSF50104 10 121 7.22E-42 T 05-07-2017 IPR008991 Translation protein SH3-like domain AC028_RS13245 6096418ce3b023f357bc5c5ad8630831 135 PRINTS PR00061 Ribosomal protein L19 signature 92 117 6.3E-36 T 05-07-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS13245 6096418ce3b023f357bc5c5ad8630831 135 PRINTS PR00061 Ribosomal protein L19 signature 8 37 6.3E-36 T 05-07-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS13245 6096418ce3b023f357bc5c5ad8630831 135 PRINTS PR00061 Ribosomal protein L19 signature 38 67 6.3E-36 T 05-07-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS13245 6096418ce3b023f357bc5c5ad8630831 135 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 05-07-2017 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS13245 6096418ce3b023f357bc5c5ad8630831 135 Pfam PF01245 Ribosomal protein L19 8 116 1.5E-45 T 05-07-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS01770 eee7c8a01dbdc6d1fa1bbbfd06765ee8 252 SUPERFAMILY SSF56784 19 247 1.7E-40 T 05-07-2017 IPR023214 HAD-like domain AC028_RS01770 eee7c8a01dbdc6d1fa1bbbfd06765ee8 252 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 19 247 1.3E-39 T 05-07-2017 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 AC028_RS01770 eee7c8a01dbdc6d1fa1bbbfd06765ee8 252 Pfam PF02358 Trehalose-phosphatase 21 226 7.1E-36 T 05-07-2017 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 AC028_RS01770 eee7c8a01dbdc6d1fa1bbbfd06765ee8 252 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 20 208 1.9E-17 T 05-07-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AC028_RS01770 eee7c8a01dbdc6d1fa1bbbfd06765ee8 252 Gene3D G3DSA:3.40.50.1000 169 250 5.4E-40 T 05-07-2017 IPR023214 HAD-like domain AC028_RS01770 eee7c8a01dbdc6d1fa1bbbfd06765ee8 252 Gene3D G3DSA:3.40.50.1000 18 93 5.4E-40 T 05-07-2017 IPR023214 HAD-like domain AC028_RS15740 3ebe095b04a9ab0fab00206a441998bb 646 Pfam PF00733 Asparagine synthase 263 634 1.3E-107 T 05-07-2017 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AC028_RS15740 3ebe095b04a9ab0fab00206a441998bb 646 Gene3D G3DSA:3.40.50.620 494 630 1.4E-87 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS15740 3ebe095b04a9ab0fab00206a441998bb 646 Gene3D G3DSA:3.40.50.620 254 407 1.4E-87 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS15740 3ebe095b04a9ab0fab00206a441998bb 646 Gene3D G3DSA:3.60.20.10 1 220 1.6E-68 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS15740 3ebe095b04a9ab0fab00206a441998bb 646 SUPERFAMILY SSF52402 490 630 1.01E-85 T 05-07-2017 AC028_RS15740 3ebe095b04a9ab0fab00206a441998bb 646 SUPERFAMILY SSF52402 253 403 1.01E-85 T 05-07-2017 AC028_RS15740 3ebe095b04a9ab0fab00206a441998bb 646 PIRSF PIRSF001589 1 646 3.7E-157 T 05-07-2017 AC028_RS15740 3ebe095b04a9ab0fab00206a441998bb 646 Pfam PF13537 Glutamine amidotransferase domain 52 171 1.5E-46 T 05-07-2017 IPR017932 Glutamine amidotransferase type 2 domain AC028_RS15740 3ebe095b04a9ab0fab00206a441998bb 646 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 570 2.5E-141 T 05-07-2017 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AC028_RS15740 3ebe095b04a9ab0fab00206a441998bb 646 SUPERFAMILY SSF56235 1 220 4.37E-64 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS06775 7bfc782dfc6358ad1043a7e4b48d3178 641 Pfam PF05299 M61 glycyl aminopeptidase 319 434 5.3E-26 T 05-07-2017 IPR007963 Peptidase M61, catalytic domain AC028_RS06775 7bfc782dfc6358ad1043a7e4b48d3178 641 PIRSF PIRSF016493 54 641 9.9E-145 T 05-07-2017 IPR024191 Peptidase M61 AC028_RS06775 7bfc782dfc6358ad1043a7e4b48d3178 641 Gene3D G3DSA:2.30.42.10 540 614 2.9E-8 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS06775 7bfc782dfc6358ad1043a7e4b48d3178 641 SUPERFAMILY SSF50156 540 591 4.66E-7 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS06775 7bfc782dfc6358ad1043a7e4b48d3178 641 SUPERFAMILY SSF55486 261 498 1.72E-7 T 05-07-2017 AC028_RS15465 b44c265c2c154a23f827521db9632c45 292 SUPERFAMILY SSF54713 149 289 6.67E-46 T 05-07-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AC028_RS15465 b44c265c2c154a23f827521db9632c45 292 Gene3D G3DSA:1.10.286.20 191 235 6.9E-11 T 05-07-2017 AC028_RS15465 b44c265c2c154a23f827521db9632c45 292 Gene3D G3DSA:3.30.479.20 150 185 6.0E-28 T 05-07-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AC028_RS15465 b44c265c2c154a23f827521db9632c45 292 Gene3D G3DSA:3.30.479.20 236 271 6.0E-28 T 05-07-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AC028_RS15465 b44c265c2c154a23f827521db9632c45 292 Gene3D G3DSA:1.10.8.10 1 54 2.3E-28 T 05-07-2017 AC028_RS15465 b44c265c2c154a23f827521db9632c45 292 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 05-07-2017 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AC028_RS15465 b44c265c2c154a23f827521db9632c45 292 Pfam PF00889 Elongation factor TS 70 272 5.4E-65 T 05-07-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AC028_RS15465 b44c265c2c154a23f827521db9632c45 292 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 289 5.3E-99 T 05-07-2017 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AC028_RS15465 b44c265c2c154a23f827521db9632c45 292 SUPERFAMILY SSF46934 1 55 2.01E-19 T 05-07-2017 IPR009060 UBA-like GO:0005515 AC028_RS15465 b44c265c2c154a23f827521db9632c45 292 Hamap MF_00050 Elongation factor Ts [tsf]. 1 289 74.323 T 05-07-2017 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AC028_RS15465 b44c265c2c154a23f827521db9632c45 292 Gene3D G3DSA:3.30.479.20 56 145 4.2E-15 T 05-07-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AC028_RS15465 b44c265c2c154a23f827521db9632c45 292 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 05-07-2017 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AC028_RS15465 b44c265c2c154a23f827521db9632c45 292 SUPERFAMILY SSF54713 55 144 2.13E-20 T 05-07-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AC028_RS13075 04ff3bf0e761b58b869bcffe24f2aeb0 463 SUPERFAMILY SSF52540 74 297 3.59E-46 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS13075 04ff3bf0e761b58b869bcffe24f2aeb0 463 Gene3D G3DSA:3.30.230.10 293 461 2.4E-35 T 05-07-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AC028_RS13075 04ff3bf0e761b58b869bcffe24f2aeb0 463 Gene3D G3DSA:3.40.50.300 64 283 1.3E-51 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS13075 04ff3bf0e761b58b869bcffe24f2aeb0 463 Pfam PF13541 Subunit ChlI of Mg-chelatase 353 436 3.0E-10 T 05-07-2017 AC028_RS13075 04ff3bf0e761b58b869bcffe24f2aeb0 463 SUPERFAMILY SSF54211 309 461 4.93E-42 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS13075 04ff3bf0e761b58b869bcffe24f2aeb0 463 SUPERFAMILY SSF54211 261 275 4.93E-42 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS13075 04ff3bf0e761b58b869bcffe24f2aeb0 463 PRINTS PR01874 DNA repair protein radA signature 89 117 3.5E-92 T 05-07-2017 AC028_RS13075 04ff3bf0e761b58b869bcffe24f2aeb0 463 PRINTS PR01874 DNA repair protein radA signature 180 204 3.5E-92 T 05-07-2017 AC028_RS13075 04ff3bf0e761b58b869bcffe24f2aeb0 463 PRINTS PR01874 DNA repair protein radA signature 10 34 3.5E-92 T 05-07-2017 AC028_RS13075 04ff3bf0e761b58b869bcffe24f2aeb0 463 PRINTS PR01874 DNA repair protein radA signature 219 247 3.5E-92 T 05-07-2017 AC028_RS13075 04ff3bf0e761b58b869bcffe24f2aeb0 463 PRINTS PR01874 DNA repair protein radA signature 328 351 3.5E-92 T 05-07-2017 AC028_RS13075 04ff3bf0e761b58b869bcffe24f2aeb0 463 PRINTS PR01874 DNA repair protein radA signature 130 147 3.5E-92 T 05-07-2017 AC028_RS13075 04ff3bf0e761b58b869bcffe24f2aeb0 463 PRINTS PR01874 DNA repair protein radA signature 254 280 3.5E-92 T 05-07-2017 AC028_RS13075 04ff3bf0e761b58b869bcffe24f2aeb0 463 Hamap MF_01498 DNA repair protein RadA [radA]. 21 462 43.498 T 05-07-2017 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AC028_RS13075 04ff3bf0e761b58b869bcffe24f2aeb0 463 Pfam PF13481 AAA domain 86 228 2.7E-13 T 05-07-2017 AC028_RS13075 04ff3bf0e761b58b869bcffe24f2aeb0 463 SMART SM00382 97 250 7.4E-9 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS13075 04ff3bf0e761b58b869bcffe24f2aeb0 463 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 458 2.0E-192 T 05-07-2017 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AC028_RS17660 ebce664e0e075790def98d83297c7f81 618 Pfam PF00563 EAL domain 350 584 1.1E-71 T 05-07-2017 IPR001633 EAL domain AC028_RS17660 ebce664e0e075790def98d83297c7f81 618 SMART SM00065 34 177 1.4E-6 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS17660 ebce664e0e075790def98d83297c7f81 618 SMART SM00267 163 333 6.2E-5 T 05-07-2017 IPR000160 GGDEF domain AC028_RS17660 ebce664e0e075790def98d83297c7f81 618 SUPERFAMILY SSF55781 35 172 2.43E-25 T 05-07-2017 IPR029016 GAF domain-like AC028_RS17660 ebce664e0e075790def98d83297c7f81 618 Gene3D G3DSA:3.30.450.40 33 171 3.2E-12 T 05-07-2017 IPR029016 GAF domain-like AC028_RS17660 ebce664e0e075790def98d83297c7f81 618 SMART SM00052 343 589 1.0E-104 T 05-07-2017 IPR001633 EAL domain AC028_RS17660 ebce664e0e075790def98d83297c7f81 618 Pfam PF01590 GAF domain 37 156 1.0E-9 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS17660 ebce664e0e075790def98d83297c7f81 618 SUPERFAMILY SSF55073 180 323 4.87E-10 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS17660 ebce664e0e075790def98d83297c7f81 618 Pfam PF00990 Diguanylate cyclase, GGDEF domain 175 314 2.7E-11 T 05-07-2017 IPR000160 GGDEF domain AC028_RS17660 ebce664e0e075790def98d83297c7f81 618 Gene3D G3DSA:3.20.20.450 349 596 1.3E-89 T 05-07-2017 IPR001633 EAL domain AC028_RS17660 ebce664e0e075790def98d83297c7f81 618 Gene3D G3DSA:3.30.70.270 176 323 1.0E-13 T 05-07-2017 AC028_RS17660 ebce664e0e075790def98d83297c7f81 618 SUPERFAMILY SSF141868 359 598 2.09E-82 T 05-07-2017 IPR001633 EAL domain AC028_RS15535 09335e8982ed2cb917c456542728c294 350 Gene3D G3DSA:2.160.20.10 41 337 5.3E-20 T 05-07-2017 IPR012334 Pectin lyase fold AC028_RS15535 09335e8982ed2cb917c456542728c294 350 SUPERFAMILY SSF51126 45 339 3.77E-35 T 05-07-2017 IPR011050 Pectin lyase fold/virulence factor AC028_RS15535 09335e8982ed2cb917c456542728c294 350 SMART SM00710 288 311 1800.0 T 05-07-2017 IPR006626 Parallel beta-helix repeat AC028_RS15535 09335e8982ed2cb917c456542728c294 350 SMART SM00710 180 202 42.0 T 05-07-2017 IPR006626 Parallel beta-helix repeat AC028_RS15535 09335e8982ed2cb917c456542728c294 350 SMART SM00710 203 225 620.0 T 05-07-2017 IPR006626 Parallel beta-helix repeat AC028_RS15535 09335e8982ed2cb917c456542728c294 350 SMART SM00710 226 248 80.0 T 05-07-2017 IPR006626 Parallel beta-helix repeat AC028_RS15535 09335e8982ed2cb917c456542728c294 350 SMART SM00710 249 271 61.0 T 05-07-2017 IPR006626 Parallel beta-helix repeat AC028_RS15535 09335e8982ed2cb917c456542728c294 350 SMART SM00710 120 163 6400.0 T 05-07-2017 IPR006626 Parallel beta-helix repeat AC028_RS15535 09335e8982ed2cb917c456542728c294 350 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 229 263 1.0E-6 T 05-07-2017 IPR022441 Parallel beta-helix repeat-2 AC028_RS15535 09335e8982ed2cb917c456542728c294 350 SMART SM00722 155 270 5.6E-4 T 05-07-2017 IPR006633 Carbohydrate-binding/sugar hydrolysis domain AC028_RS15535 09335e8982ed2cb917c456542728c294 350 Pfam PF13229 Right handed beta helix region 150 297 1.3E-17 T 05-07-2017 AC028_RS17070 fef6142553004d8b14ab9d5d65ed30c9 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 178 8.5E-20 T 05-07-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS17070 fef6142553004d8b14ab9d5d65ed30c9 193 SUPERFAMILY SSF88946 6 115 5.1E-21 T 05-07-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS17070 fef6142553004d8b14ab9d5d65ed30c9 193 Gene3D G3DSA:1.10.10.10 119 179 6.1E-19 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS17070 fef6142553004d8b14ab9d5d65ed30c9 193 Pfam PF04542 Sigma-70 region 2 30 93 3.3E-7 T 05-07-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS17070 fef6142553004d8b14ab9d5d65ed30c9 193 Pfam PF08281 Sigma-70, region 4 123 175 2.1E-11 T 05-07-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS17070 fef6142553004d8b14ab9d5d65ed30c9 193 Gene3D G3DSA:1.10.1740.10 7 118 9.9E-23 T 05-07-2017 AC028_RS17070 fef6142553004d8b14ab9d5d65ed30c9 193 SUPERFAMILY SSF88659 115 179 5.23E-15 T 05-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS02190 f49a055b10cef162befe197d37e4b737 241 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 8 239 40.91 T 05-07-2017 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AC028_RS02190 f49a055b10cef162befe197d37e4b737 241 SUPERFAMILY SSF52402 16 204 4.79E-58 T 05-07-2017 AC028_RS02190 f49a055b10cef162befe197d37e4b737 241 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 44 215 4.4E-54 T 05-07-2017 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AC028_RS02190 f49a055b10cef162befe197d37e4b737 241 PIRSF PIRSF000857 4 241 3.0E-60 T 05-07-2017 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AC028_RS02190 f49a055b10cef162befe197d37e4b737 241 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 17 238 6.3E-88 T 05-07-2017 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 AC028_RS02190 f49a055b10cef162befe197d37e4b737 241 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 29 239 5.6E-82 T 05-07-2017 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AC028_RS02190 f49a055b10cef162befe197d37e4b737 241 Gene3D G3DSA:3.40.50.620 12 212 1.1E-64 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS21605 7c2e56d6b2c4f9879e1df9ed18314823 175 PIRSF PIRSF000216 3 175 1.1E-52 T 05-07-2017 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21605 7c2e56d6b2c4f9879e1df9ed18314823 175 SUPERFAMILY SSF52833 20 174 2.68E-46 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS21605 7c2e56d6b2c4f9879e1df9ed18314823 175 Gene3D G3DSA:3.40.30.10 94 172 2.0E-7 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS21605 7c2e56d6b2c4f9879e1df9ed18314823 175 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 26 174 5.5E-59 T 05-07-2017 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21605 7c2e56d6b2c4f9879e1df9ed18314823 175 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 28 174 3.0E-46 T 05-07-2017 AC028_RS13140 609b8ba02cf07d5ba5e009e4401fe6cd 789 Gene3D G3DSA:2.170.130.10 56 198 3.5E-24 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS13140 609b8ba02cf07d5ba5e009e4401fe6cd 789 SUPERFAMILY SSF56935 54 643 5.86E-108 T 05-07-2017 AC028_RS13140 609b8ba02cf07d5ba5e009e4401fe6cd 789 SUPERFAMILY SSF56935 673 788 5.86E-108 T 05-07-2017 AC028_RS13140 609b8ba02cf07d5ba5e009e4401fe6cd 789 Gene3D G3DSA:2.40.170.20 199 642 5.6E-82 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS13140 609b8ba02cf07d5ba5e009e4401fe6cd 789 Gene3D G3DSA:2.40.170.20 676 787 5.6E-82 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS13140 609b8ba02cf07d5ba5e009e4401fe6cd 789 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 72 - T 05-07-2017 IPR010916 TonB box, conserved site AC028_RS13140 609b8ba02cf07d5ba5e009e4401fe6cd 789 Pfam PF00593 TonB dependent receptor 514 786 1.3E-20 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS13140 609b8ba02cf07d5ba5e009e4401fe6cd 789 Pfam PF07715 TonB-dependent Receptor Plug Domain 78 189 3.7E-12 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS20960 c6dc691d5311e7c0e5e694d4e9c65690 1326 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1252 1320 6.0E-13 T 05-07-2017 IPR022385 Rhs repeat-associated core GO:0097264 AC028_RS20960 c6dc691d5311e7c0e5e694d4e9c65690 1326 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 808 849 1.5E-7 T 05-07-2017 IPR006530 YD repeat AC028_RS20960 c6dc691d5311e7c0e5e694d4e9c65690 1326 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 829 869 5.0E-7 T 05-07-2017 IPR006530 YD repeat AC028_RS20960 c6dc691d5311e7c0e5e694d4e9c65690 1326 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 624 655 5.7E-5 T 05-07-2017 IPR006530 YD repeat AC028_RS20960 c6dc691d5311e7c0e5e694d4e9c65690 1326 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 850 881 8.7E-4 T 05-07-2017 IPR006530 YD repeat AC028_RS20960 c6dc691d5311e7c0e5e694d4e9c65690 1326 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 682 715 4.6E-6 T 05-07-2017 IPR006530 YD repeat AC028_RS20960 c6dc691d5311e7c0e5e694d4e9c65690 1326 Pfam PF05593 RHS Repeat 1041 1079 3.9E-5 T 05-07-2017 IPR031325 RHS repeat AC028_RS20960 c6dc691d5311e7c0e5e694d4e9c65690 1326 Pfam PF05593 RHS Repeat 784 822 3.9E-5 T 05-07-2017 IPR031325 RHS repeat AC028_RS20960 c6dc691d5311e7c0e5e694d4e9c65690 1326 Pfam PF05593 RHS Repeat 829 866 6.5E-7 T 05-07-2017 IPR031325 RHS repeat AC028_RS20960 c6dc691d5311e7c0e5e694d4e9c65690 1326 Pfam PF05593 RHS Repeat 674 711 5.2E-7 T 05-07-2017 IPR031325 RHS repeat AC028_RS20960 c6dc691d5311e7c0e5e694d4e9c65690 1326 Pfam PF05593 RHS Repeat 742 775 8.6E-5 T 05-07-2017 IPR031325 RHS repeat AC028_RS20960 c6dc691d5311e7c0e5e694d4e9c65690 1326 Pfam PF05593 RHS Repeat 808 844 2.7E-8 T 05-07-2017 IPR031325 RHS repeat AC028_RS20960 c6dc691d5311e7c0e5e694d4e9c65690 1326 Pfam PF05593 RHS Repeat 850 885 3.1E-9 T 05-07-2017 IPR031325 RHS repeat AC028_RS20960 c6dc691d5311e7c0e5e694d4e9c65690 1326 Pfam PF05593 RHS Repeat 624 655 1.4E-7 T 05-07-2017 IPR031325 RHS repeat AC028_RS05685 5b90d5fe80804ac928f6d95b52740c7d 837 TIGRFAM TIGR04510 mod_pep_cyc: putative peptide modification system cyclase 17 827 0.0 T 05-07-2017 IPR030966 Putative peptide modification system cyclase AC028_RS05685 5b90d5fe80804ac928f6d95b52740c7d 837 SUPERFAMILY SSF81901 418 603 1.65E-12 T 05-07-2017 AC028_RS05685 5b90d5fe80804ac928f6d95b52740c7d 837 Pfam PF14559 Tetratricopeptide repeat 426 474 1.5E-5 T 05-07-2017 AC028_RS05685 5b90d5fe80804ac928f6d95b52740c7d 837 Gene3D G3DSA:1.25.40.10 418 675 9.4E-14 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS05685 5b90d5fe80804ac928f6d95b52740c7d 837 Gene3D G3DSA:3.30.70.1230 23 203 3.7E-8 T 05-07-2017 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AC028_RS05685 5b90d5fe80804ac928f6d95b52740c7d 837 SUPERFAMILY SSF55073 20 207 7.69E-21 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS09710 c867534af71efd15aa2e132476220c54 232 Pfam PF01987 Mitochondrial biogenesis AIM24 27 221 1.4E-32 T 05-07-2017 IPR002838 Mitochondrial biogenesis protein AIM24 AC028_RS09710 c867534af71efd15aa2e132476220c54 232 SUPERFAMILY SSF51219 26 228 2.09E-51 T 05-07-2017 IPR016031 Tryptophan RNA-binding attenuator protein-like domain AC028_RS09710 c867534af71efd15aa2e132476220c54 232 Gene3D G3DSA:3.60.160.10 26 229 1.4E-42 T 05-07-2017 IPR002838 Mitochondrial biogenesis protein AIM24 AC028_RS21425 a3089e40a0e0720a0951065c955c0317 135 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 32 117 2.6E-23 T 05-07-2017 IPR031982 Type IV minor pilin ComP AC028_RS21425 a3089e40a0e0720a0951065c955c0317 135 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS21425 a3089e40a0e0720a0951065c955c0317 135 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 8 30 1.8E-7 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS21425 a3089e40a0e0720a0951065c955c0317 135 Gene3D G3DSA:3.30.700.10 11 112 5.7E-15 T 05-07-2017 AC028_RS21425 a3089e40a0e0720a0951065c955c0317 135 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 1.2E-9 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS21425 a3089e40a0e0720a0951065c955c0317 135 SUPERFAMILY SSF54523 11 124 1.2E-22 T 05-07-2017 AC028_RS22325 5e4ac486114a63fe880b7b7fd229ab3a 93 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 92 3.3E-21 T 05-07-2017 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AC028_RS22325 5e4ac486114a63fe880b7b7fd229ab3a 93 SUPERFAMILY SSF143011 1 92 1.67E-23 T 05-07-2017 AC028_RS22325 5e4ac486114a63fe880b7b7fd229ab3a 93 PIRSF PIRSF006156 1 93 2.5E-23 T 05-07-2017 IPR004386 Toxin-antitoxin system, YafQ-like toxin AC028_RS22325 5e4ac486114a63fe880b7b7fd229ab3a 93 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 2 93 3.5E-30 T 05-07-2017 IPR004386 Toxin-antitoxin system, YafQ-like toxin AC028_RS07945 9c6620e25a62ffc18ded0e4bea4586fa 1193 SMART SM00237 210 296 0.0044 T 05-07-2017 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AC028_RS07945 9c6620e25a62ffc18ded0e4bea4586fa 1193 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 591 879 1.6E-6 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS07945 9c6620e25a62ffc18ded0e4bea4586fa 1193 Pfam PF03160 Calx-beta domain 225 296 2.5E-8 T 05-07-2017 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 AC028_RS07945 9c6620e25a62ffc18ded0e4bea4586fa 1193 Gene3D G3DSA:3.60.10.10 589 919 8.6E-14 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS07945 9c6620e25a62ffc18ded0e4bea4586fa 1193 SUPERFAMILY SSF141072 209 318 3.79E-22 T 05-07-2017 AC028_RS07945 9c6620e25a62ffc18ded0e4bea4586fa 1193 SUPERFAMILY SSF88633 19 191 2.12E-12 T 05-07-2017 AC028_RS07945 9c6620e25a62ffc18ded0e4bea4586fa 1193 Pfam PF00932 Lamin Tail Domain 21 126 2.2E-16 T 05-07-2017 IPR001322 Lamin Tail Domain AC028_RS07945 9c6620e25a62ffc18ded0e4bea4586fa 1193 SUPERFAMILY SSF56219 587 920 2.09E-23 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS19865 7e8601a9d5507c8d411038ea999a15ec 382 Gene3D G3DSA:3.90.1150.10 269 381 2.2E-15 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS19865 7e8601a9d5507c8d411038ea999a15ec 382 Gene3D G3DSA:3.40.640.10 39 268 8.0E-77 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS19865 7e8601a9d5507c8d411038ea999a15ec 382 SUPERFAMILY SSF53383 6 381 6.38E-100 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS19865 7e8601a9d5507c8d411038ea999a15ec 382 Pfam PF00155 Aminotransferase class I and II 28 379 1.4E-58 T 05-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AC028_RS13470 97226685a94a79f594ac8201a0c4271d 464 SUPERFAMILY SSF53738 6 175 1.96E-37 T 05-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS13470 97226685a94a79f594ac8201a0c4271d 464 Gene3D G3DSA:3.40.120.10 170 247 9.6E-33 T 05-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS13470 97226685a94a79f594ac8201a0c4271d 464 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 231 246 1.7E-23 T 05-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS13470 97226685a94a79f594ac8201a0c4271d 464 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 202 215 1.7E-23 T 05-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS13470 97226685a94a79f594ac8201a0c4271d 464 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 168 187 1.7E-23 T 05-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS13470 97226685a94a79f594ac8201a0c4271d 464 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.7E-23 T 05-07-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS13470 97226685a94a79f594ac8201a0c4271d 464 Gene3D G3DSA:3.40.120.10 249 365 4.4E-45 T 05-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS13470 97226685a94a79f594ac8201a0c4271d 464 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 154 251 2.3E-28 T 05-07-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS13470 97226685a94a79f594ac8201a0c4271d 464 SUPERFAMILY SSF55957 365 461 2.79E-19 T 05-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS13470 97226685a94a79f594ac8201a0c4271d 464 SUPERFAMILY SSF53738 153 252 6.67E-32 T 05-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS13470 97226685a94a79f594ac8201a0c4271d 464 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 256 365 1.6E-24 T 05-07-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS13470 97226685a94a79f594ac8201a0c4271d 464 Gene3D G3DSA:3.40.120.10 7 134 3.8E-34 T 05-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS13470 97226685a94a79f594ac8201a0c4271d 464 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 135 8.3E-36 T 05-07-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS13470 97226685a94a79f594ac8201a0c4271d 464 Gene3D G3DSA:3.30.310.50 368 459 6.9E-25 T 05-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS13470 97226685a94a79f594ac8201a0c4271d 464 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 371 452 7.9E-14 T 05-07-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS13470 97226685a94a79f594ac8201a0c4271d 464 SUPERFAMILY SSF53738 256 362 3.3E-34 T 05-07-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AC028_RS02615 bfcfbb01f48b4b68631078aa1c6df15b 180 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 2 180 30.745 T 05-07-2017 IPR011978 Uncharacterised protein family UPF0149 AC028_RS02615 bfcfbb01f48b4b68631078aa1c6df15b 180 Pfam PF03695 Uncharacterised protein family (UPF0149) 15 167 3.1E-28 T 05-07-2017 IPR011978 Uncharacterised protein family UPF0149 AC028_RS02615 bfcfbb01f48b4b68631078aa1c6df15b 180 SUPERFAMILY SSF101327 4 168 1.02E-38 T 05-07-2017 IPR011978 Uncharacterised protein family UPF0149 AC028_RS10515 a76541b9398416c6bc32f9689ef65685 452 Gene3D G3DSA:1.20.1280.50 45 78 5.1E-4 T 05-07-2017 AC028_RS10515 a76541b9398416c6bc32f9689ef65685 452 Pfam PF00646 F-box domain 49 78 1.9E-5 T 05-07-2017 IPR001810 F-box domain GO:0005515 AC028_RS10515 a76541b9398416c6bc32f9689ef65685 452 SUPERFAMILY SSF81383 43 103 1.96E-6 T 05-07-2017 IPR001810 F-box domain GO:0005515 AC028_RS14130 500c7cad1217471092a611c73e22ca0c 528 SUPERFAMILY SSF53335 51 295 5.05E-36 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS14130 500c7cad1217471092a611c73e22ca0c 528 Pfam PF02384 N-6 DNA Methylase 68 294 7.2E-6 T 05-07-2017 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AC028_RS14130 500c7cad1217471092a611c73e22ca0c 528 Gene3D G3DSA:3.40.50.150 77 293 5.2E-28 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS14130 500c7cad1217471092a611c73e22ca0c 528 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 167 179 3.1E-9 T 05-07-2017 AC028_RS14130 500c7cad1217471092a611c73e22ca0c 528 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 75 91 3.1E-9 T 05-07-2017 AC028_RS14130 500c7cad1217471092a611c73e22ca0c 528 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 100 114 3.1E-9 T 05-07-2017 AC028_RS20660 2cae2fa5adff26204977b8e3fda50d83 461 Gene3D G3DSA:3.30.590.10 127 446 2.7E-95 T 05-07-2017 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AC028_RS20660 2cae2fa5adff26204977b8e3fda50d83 461 SUPERFAMILY SSF55931 123 458 3.34E-106 T 05-07-2017 AC028_RS20660 2cae2fa5adff26204977b8e3fda50d83 461 Gene3D G3DSA:3.10.20.70 19 126 2.1E-21 T 05-07-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AC028_RS20660 2cae2fa5adff26204977b8e3fda50d83 461 Pfam PF00120 Glutamine synthetase, catalytic domain 124 455 3.2E-105 T 05-07-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AC028_RS20660 2cae2fa5adff26204977b8e3fda50d83 461 SMART SM01230 123 380 1.4E-103 T 05-07-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AC028_RS20660 2cae2fa5adff26204977b8e3fda50d83 461 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 05-07-2017 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AC028_RS20660 2cae2fa5adff26204977b8e3fda50d83 461 SUPERFAMILY SSF54368 19 122 5.49E-24 T 05-07-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AC028_RS11770 25c896f3507e95d1d2cd7de2022ae159 172 Gene3D G3DSA:1.20.1550.10 7 169 1.5E-50 T 05-07-2017 IPR023380 Disulphide bond formation protein DsbB-like domain AC028_RS11770 25c896f3507e95d1d2cd7de2022ae159 172 SUPERFAMILY SSF158442 12 161 1.18E-41 T 05-07-2017 AC028_RS11770 25c896f3507e95d1d2cd7de2022ae159 172 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 4 168 23.037 T 05-07-2017 IPR022920 Disulphide bond formation protein DsbB AC028_RS11770 25c896f3507e95d1d2cd7de2022ae159 172 Pfam PF02600 Disulfide bond formation protein DsbB 9 160 2.7E-41 T 05-07-2017 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AC028_RS16275 f155c4ac105290553fd03367b1916728 309 SUPERFAMILY SSF55729 7 129 4.36E-20 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS16275 f155c4ac105290553fd03367b1916728 309 Gene3D G3DSA:3.30.870.10 161 244 2.9E-4 T 05-07-2017 AC028_RS16275 f155c4ac105290553fd03367b1916728 309 Pfam PF13673 Acetyltransferase (GNAT) domain 49 123 3.0E-10 T 05-07-2017 IPR000182 GNAT domain GO:0008080 AC028_RS16275 f155c4ac105290553fd03367b1916728 309 Gene3D G3DSA:3.40.630.30 16 125 6.0E-17 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS04945 b39340e9c21bca896925f19f1fc8fada 443 Pfam PF13489 Methyltransferase domain 261 415 5.0E-12 T 05-07-2017 AC028_RS04945 b39340e9c21bca896925f19f1fc8fada 443 SUPERFAMILY SSF53335 238 422 2.13E-28 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS04945 b39340e9c21bca896925f19f1fc8fada 443 Pfam PF00515 Tetratricopeptide repeat 76 107 5.9E-8 T 05-07-2017 IPR001440 Tetratricopeptide repeat 1 GO:0005515 AC028_RS04945 b39340e9c21bca896925f19f1fc8fada 443 SMART SM00028 144 181 80.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS04945 b39340e9c21bca896925f19f1fc8fada 443 SMART SM00028 42 75 0.039 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS04945 b39340e9c21bca896925f19f1fc8fada 443 SMART SM00028 76 109 1.5E-6 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS04945 b39340e9c21bca896925f19f1fc8fada 443 SMART SM00028 110 143 36.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS04945 b39340e9c21bca896925f19f1fc8fada 443 Gene3D G3DSA:3.40.50.150 238 417 9.4E-25 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS04945 b39340e9c21bca896925f19f1fc8fada 443 Gene3D G3DSA:1.25.40.10 9 225 8.5E-45 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS04945 b39340e9c21bca896925f19f1fc8fada 443 SUPERFAMILY SSF48452 14 221 2.53E-32 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS15550 5cafe8380ec42435087579db45a4f504 161 SUPERFAMILY SSF47240 1 156 3.87E-43 T 05-07-2017 IPR009078 Ferritin-like superfamily AC028_RS15550 5cafe8380ec42435087579db45a4f504 161 PIRSF PIRSF002560 1 157 8.7E-59 T 05-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AC028_RS15550 5cafe8380ec42435087579db45a4f504 161 Gene3D G3DSA:1.20.1260.10 1 156 7.3E-52 T 05-07-2017 IPR012347 Ferritin-related AC028_RS15550 5cafe8380ec42435087579db45a4f504 161 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 05-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AC028_RS15550 5cafe8380ec42435087579db45a4f504 161 PRINTS PR00601 Bacterioferritin signature 3 22 3.9E-37 T 05-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AC028_RS15550 5cafe8380ec42435087579db45a4f504 161 PRINTS PR00601 Bacterioferritin signature 44 64 3.9E-37 T 05-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AC028_RS15550 5cafe8380ec42435087579db45a4f504 161 PRINTS PR00601 Bacterioferritin signature 106 126 3.9E-37 T 05-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AC028_RS15550 5cafe8380ec42435087579db45a4f504 161 PRINTS PR00601 Bacterioferritin signature 23 43 3.9E-37 T 05-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AC028_RS15550 5cafe8380ec42435087579db45a4f504 161 PRINTS PR00601 Bacterioferritin signature 85 105 3.9E-37 T 05-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AC028_RS15550 5cafe8380ec42435087579db45a4f504 161 PRINTS PR00601 Bacterioferritin signature 128 149 3.9E-37 T 05-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AC028_RS15550 5cafe8380ec42435087579db45a4f504 161 Pfam PF00210 Ferritin-like domain 9 144 1.6E-34 T 05-07-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AC028_RS15550 5cafe8380ec42435087579db45a4f504 161 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 8.4E-40 T 05-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AC028_RS02445 f9157df7ef5edc82b347d631ec672daa 153 Pfam PF14316 Domain of unknown function (DUF4381) 7 142 3.9E-32 T 05-07-2017 IPR025489 Protein of unknown function (DUF4381 AC028_RS02445 f9157df7ef5edc82b347d631ec672daa 153 Gene3D G3DSA:1.20.140.10 18 95 7.4E-4 T 05-07-2017 AC028_RS02210 4354fce0dea70c78fbd31fe2c05af24b 398 Gene3D G3DSA:3.30.565.10 253 397 4.8E-31 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS02210 4354fce0dea70c78fbd31fe2c05af24b 398 Gene3D G3DSA:1.10.287.130 179 223 1.9E-4 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS02210 4354fce0dea70c78fbd31fe2c05af24b 398 SMART SM00065 38 180 9.8E-6 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS02210 4354fce0dea70c78fbd31fe2c05af24b 398 Gene3D G3DSA:3.30.450.40 39 178 1.3E-10 T 05-07-2017 IPR029016 GAF domain-like AC028_RS02210 4354fce0dea70c78fbd31fe2c05af24b 398 Pfam PF01590 GAF domain 40 167 9.2E-7 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS02210 4354fce0dea70c78fbd31fe2c05af24b 398 SUPERFAMILY SSF55781 40 178 7.2E-23 T 05-07-2017 IPR029016 GAF domain-like AC028_RS02210 4354fce0dea70c78fbd31fe2c05af24b 398 SUPERFAMILY SSF47384 171 218 3.53E-6 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS02210 4354fce0dea70c78fbd31fe2c05af24b 398 SMART SM00387 292 398 3.4E-20 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS02210 4354fce0dea70c78fbd31fe2c05af24b 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 356 1.1E-8 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS02210 4354fce0dea70c78fbd31fe2c05af24b 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 396 1.1E-8 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS02210 4354fce0dea70c78fbd31fe2c05af24b 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 342 1.1E-8 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS02210 4354fce0dea70c78fbd31fe2c05af24b 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 377 1.1E-8 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS02210 4354fce0dea70c78fbd31fe2c05af24b 398 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 295 397 1.6E-16 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS02210 4354fce0dea70c78fbd31fe2c05af24b 398 SUPERFAMILY SSF55874 253 397 1.24E-31 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13475 66c8558c350e3d38231d15a897d98cb1 195 SUPERFAMILY SSF143422 36 129 9.81E-5 T 05-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AC028_RS13125 e21ecaea87150138cecf4bdd7fa5e617 290 SUPERFAMILY SSF55874 113 280 8.51E-45 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13125 e21ecaea87150138cecf4bdd7fa5e617 290 SUPERFAMILY SSF47384 39 125 4.32E-20 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS13125 e21ecaea87150138cecf4bdd7fa5e617 290 SMART SM00388 56 124 1.6E-18 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS13125 e21ecaea87150138cecf4bdd7fa5e617 290 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 171 281 3.3E-24 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13125 e21ecaea87150138cecf4bdd7fa5e617 290 Gene3D G3DSA:3.30.565.10 125 285 1.0E-40 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13125 e21ecaea87150138cecf4bdd7fa5e617 290 PRINTS PR00344 Bacterial sensor protein C-terminal signature 225 235 1.1E-17 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS13125 e21ecaea87150138cecf4bdd7fa5e617 290 PRINTS PR00344 Bacterial sensor protein C-terminal signature 207 221 1.1E-17 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS13125 e21ecaea87150138cecf4bdd7fa5e617 290 PRINTS PR00344 Bacterial sensor protein C-terminal signature 266 279 1.1E-17 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS13125 e21ecaea87150138cecf4bdd7fa5e617 290 PRINTS PR00344 Bacterial sensor protein C-terminal signature 242 260 1.1E-17 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS13125 e21ecaea87150138cecf4bdd7fa5e617 290 Gene3D G3DSA:1.10.287.130 47 120 5.5E-14 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS13125 e21ecaea87150138cecf4bdd7fa5e617 290 SMART SM00387 170 282 8.2E-33 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13125 e21ecaea87150138cecf4bdd7fa5e617 290 Pfam PF00512 His Kinase A (phospho-acceptor) domain 57 124 2.6E-15 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS00295 3ba056c64260bed497d2f25c6cce84a5 198 Pfam PF07273 Protein of unknown function (DUF1439) 38 159 1.9E-8 T 05-07-2017 IPR010835 Protein of unknown function DUF1439 AC028_RS15100 1b936d279eb6ace8b33dce8b7a1ccedb 1039 Gene3D G3DSA:3.40.50.2000 186 376 1.4E-24 T 05-07-2017 AC028_RS15100 1b936d279eb6ace8b33dce8b7a1ccedb 1039 Gene3D G3DSA:3.40.50.2000 629 764 2.1E-18 T 05-07-2017 AC028_RS15100 1b936d279eb6ace8b33dce8b7a1ccedb 1039 SUPERFAMILY SSF53756 16 397 1.17E-59 T 05-07-2017 AC028_RS15100 1b936d279eb6ace8b33dce8b7a1ccedb 1039 Pfam PF13439 Glycosyltransferase Family 4 18 191 3.1E-7 T 05-07-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AC028_RS15100 1b936d279eb6ace8b33dce8b7a1ccedb 1039 SUPERFAMILY SSF53756 486 836 1.35E-35 T 05-07-2017 AC028_RS15100 1b936d279eb6ace8b33dce8b7a1ccedb 1039 Pfam PF00534 Glycosyl transferases group 1 222 378 4.3E-28 T 05-07-2017 IPR001296 Glycosyl transferase, family 1 AC028_RS15100 1b936d279eb6ace8b33dce8b7a1ccedb 1039 Pfam PF00534 Glycosyl transferases group 1 637 763 6.5E-15 T 05-07-2017 IPR001296 Glycosyl transferase, family 1 AC028_RS10570 508e1bc3265dd1e480e2ba85c4c5ca64 273 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 206 2.2E-30 T 05-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AC028_RS10570 508e1bc3265dd1e480e2ba85c4c5ca64 273 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 6 227 37.236 T 05-07-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AC028_RS10570 508e1bc3265dd1e480e2ba85c4c5ca64 273 SUPERFAMILY SSF53790 5 225 5.63E-78 T 05-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AC028_RS10570 508e1bc3265dd1e480e2ba85c4c5ca64 273 PIRSF PIRSF005917 1 273 4.5E-97 T 05-07-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AC028_RS10570 508e1bc3265dd1e480e2ba85c4c5ca64 273 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 84 95 - T 05-07-2017 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AC028_RS10570 508e1bc3265dd1e480e2ba85c4c5ca64 273 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 7 271 1.5E-81 T 05-07-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AC028_RS10570 508e1bc3265dd1e480e2ba85c4c5ca64 273 Gene3D G3DSA:3.40.1010.10 5 114 1.2E-12 T 05-07-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AC028_RS10570 508e1bc3265dd1e480e2ba85c4c5ca64 273 Gene3D G3DSA:3.30.950.10 115 228 3.1E-41 T 05-07-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AC028_RS14315 4e18d3fd188da7b0708318b64aa92f57 118 Pfam PF03692 Putative zinc- or iron-chelating domain 23 92 4.2E-9 T 05-07-2017 IPR005358 Putative zinc- or iron-chelating domain containing protein AC028_RS03525 1e45e665a952d3da22410ced1e059747 309 Gene3D G3DSA:3.40.190.10 285 299 1.8E-21 T 05-07-2017 AC028_RS03525 1e45e665a952d3da22410ced1e059747 309 Gene3D G3DSA:3.40.190.10 90 178 1.8E-21 T 05-07-2017 AC028_RS03525 1e45e665a952d3da22410ced1e059747 309 Gene3D G3DSA:1.10.10.10 3 86 8.2E-26 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS03525 1e45e665a952d3da22410ced1e059747 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.9E-14 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS03525 1e45e665a952d3da22410ced1e059747 309 Pfam PF03466 LysR substrate binding domain 96 297 3.0E-20 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS03525 1e45e665a952d3da22410ced1e059747 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.8E-6 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS03525 1e45e665a952d3da22410ced1e059747 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.8E-6 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS03525 1e45e665a952d3da22410ced1e059747 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.8E-6 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS03525 1e45e665a952d3da22410ced1e059747 309 Gene3D G3DSA:3.40.190.10 179 268 2.7E-30 T 05-07-2017 AC028_RS03525 1e45e665a952d3da22410ced1e059747 309 SUPERFAMILY SSF46785 3 84 9.53E-17 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS03525 1e45e665a952d3da22410ced1e059747 309 SUPERFAMILY SSF53850 90 295 2.35E-38 T 05-07-2017 AC028_RS09305 d21da7a9b0042185247dbde8323edcfb 472 Pfam PF02614 Glucuronate isomerase 22 467 4.7E-71 T 05-07-2017 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 AC028_RS09305 d21da7a9b0042185247dbde8323edcfb 472 Gene3D G3DSA:3.20.20.140 7 51 3.5E-149 T 05-07-2017 AC028_RS09305 d21da7a9b0042185247dbde8323edcfb 472 Gene3D G3DSA:3.20.20.140 153 472 3.5E-149 T 05-07-2017 AC028_RS09305 d21da7a9b0042185247dbde8323edcfb 472 Hamap MF_00675 Uronate isomerase [uxaC]. 5 472 39.656 T 05-07-2017 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 AC028_RS09305 d21da7a9b0042185247dbde8323edcfb 472 SUPERFAMILY SSF51556 8 471 6.8E-156 T 05-07-2017 IPR032466 Metal-dependent hydrolase AC028_RS09305 d21da7a9b0042185247dbde8323edcfb 472 Gene3D G3DSA:1.10.2020.10 53 152 3.5E-30 T 05-07-2017 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 AC028_RS00145 18ac4447524df83b7c6872cc2ff614b7 222 SUPERFAMILY SSF47741 138 219 1.1E-26 T 05-07-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AC028_RS00145 18ac4447524df83b7c6872cc2ff614b7 222 Pfam PF01799 [2Fe-2S] binding domain 127 214 3.2E-29 T 05-07-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AC028_RS00145 18ac4447524df83b7c6872cc2ff614b7 222 Gene3D G3DSA:1.10.150.120 129 218 2.7E-31 T 05-07-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AC028_RS00145 18ac4447524df83b7c6872cc2ff614b7 222 SUPERFAMILY SSF54292 56 141 4.33E-27 T 05-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AC028_RS00145 18ac4447524df83b7c6872cc2ff614b7 222 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 93 101 - T 05-07-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AC028_RS00145 18ac4447524df83b7c6872cc2ff614b7 222 Gene3D G3DSA:3.10.20.30 55 128 6.2E-33 T 05-07-2017 IPR012675 Beta-grasp domain AC028_RS00145 18ac4447524df83b7c6872cc2ff614b7 222 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 60 108 4.3E-10 T 05-07-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AC028_RS00580 351446dc79b9440e9cb8f112bac90e46 353 SUPERFAMILY SSF51126 24 350 1.3E-65 T 05-07-2017 IPR011050 Pectin lyase fold/virulence factor AC028_RS00580 351446dc79b9440e9cb8f112bac90e46 353 Gene3D G3DSA:2.160.20.10 25 349 9.6E-81 T 05-07-2017 IPR012334 Pectin lyase fold AC028_RS00580 351446dc79b9440e9cb8f112bac90e46 353 Pfam PF00544 Pectate lyase 62 269 1.3E-46 T 05-07-2017 IPR002022 Pectate lyase/Amb allergen AC028_RS00580 351446dc79b9440e9cb8f112bac90e46 353 SMART SM00656 39 275 1.5E-30 T 05-07-2017 IPR002022 Pectate lyase/Amb allergen AC028_RS17645 02faf3f6f5ed1c7ed45814b98730fa9e 870 Gene3D G3DSA:3.40.50.1700 437 664 4.1E-63 T 05-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AC028_RS17645 02faf3f6f5ed1c7ed45814b98730fa9e 870 SUPERFAMILY SSF51445 69 450 6.63E-105 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS17645 02faf3f6f5ed1c7ed45814b98730fa9e 870 PRINTS PR00133 Glycosyl hydrolase family 3 signature 263 279 1.5E-19 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS17645 02faf3f6f5ed1c7ed45814b98730fa9e 870 PRINTS PR00133 Glycosyl hydrolase family 3 signature 222 238 1.5E-19 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS17645 02faf3f6f5ed1c7ed45814b98730fa9e 870 PRINTS PR00133 Glycosyl hydrolase family 3 signature 176 195 1.5E-19 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS17645 02faf3f6f5ed1c7ed45814b98730fa9e 870 PRINTS PR00133 Glycosyl hydrolase family 3 signature 152 168 1.5E-19 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS17645 02faf3f6f5ed1c7ed45814b98730fa9e 870 PRINTS PR00133 Glycosyl hydrolase family 3 signature 333 351 1.5E-19 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS17645 02faf3f6f5ed1c7ed45814b98730fa9e 870 SUPERFAMILY SSF52279 451 666 4.84E-46 T 05-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AC028_RS17645 02faf3f6f5ed1c7ed45814b98730fa9e 870 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 451 665 5.3E-34 T 05-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AC028_RS17645 02faf3f6f5ed1c7ed45814b98730fa9e 870 Gene3D G3DSA:3.20.20.300 71 419 8.2E-104 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS17645 02faf3f6f5ed1c7ed45814b98730fa9e 870 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 87 410 4.2E-78 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS15160 58c4af2d69406d46d053362ee398f4f2 431 Gene3D G3DSA:3.50.50.60 189 293 5.5E-33 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS15160 58c4af2d69406d46d053362ee398f4f2 431 Gene3D G3DSA:3.50.50.60 5 101 5.5E-33 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS15160 58c4af2d69406d46d053362ee398f4f2 431 Pfam PF01593 Flavin containing amine oxidoreductase 13 405 8.4E-30 T 05-07-2017 IPR002937 Amine oxidase GO:0016491|GO:0055114 AC028_RS15160 58c4af2d69406d46d053362ee398f4f2 431 SUPERFAMILY SSF51905 394 427 2.85E-43 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS15160 58c4af2d69406d46d053362ee398f4f2 431 SUPERFAMILY SSF51905 5 292 2.85E-43 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS15160 58c4af2d69406d46d053362ee398f4f2 431 PRINTS PR00419 Adrenodoxin reductase family signature 26 39 7.2E-10 T 05-07-2017 AC028_RS15160 58c4af2d69406d46d053362ee398f4f2 431 PRINTS PR00419 Adrenodoxin reductase family signature 3 25 7.2E-10 T 05-07-2017 AC028_RS16510 c36be320147d3d65f095b421f5da6ad7 213 Hamap MF_00157 Ribonuclease T [rnt]. 1 213 85.305 T 05-07-2017 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AC028_RS16510 c36be320147d3d65f095b421f5da6ad7 213 SMART SM00479 26 211 9.9E-23 T 05-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III AC028_RS16510 c36be320147d3d65f095b421f5da6ad7 213 Pfam PF00929 Exonuclease 28 202 1.0E-23 T 05-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III AC028_RS16510 c36be320147d3d65f095b421f5da6ad7 213 SUPERFAMILY SSF53098 17 210 4.61E-53 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS16510 c36be320147d3d65f095b421f5da6ad7 213 Gene3D G3DSA:3.30.420.10 18 210 3.0E-52 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS16510 c36be320147d3d65f095b421f5da6ad7 213 TIGRFAM TIGR01298 RNaseT: ribonuclease T 18 210 1.6E-99 T 05-07-2017 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AC028_RS14820 58c4ff077dabd6070b36826a84e22507 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.829 T 05-07-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AC028_RS14820 58c4ff077dabd6070b36826a84e22507 287 Gene3D G3DSA:1.10.287.80 202 235 8.4E-39 T 05-07-2017 AC028_RS14820 58c4ff077dabd6070b36826a84e22507 287 Gene3D G3DSA:1.10.287.80 19 60 8.4E-39 T 05-07-2017 AC028_RS14820 58c4ff077dabd6070b36826a84e22507 287 SUPERFAMILY SSF52943 3 287 8.63E-94 T 05-07-2017 IPR023633 ATPase, F1 complex, gamma subunit domain Reactome: R-HSA-163210 AC028_RS14820 58c4ff077dabd6070b36826a84e22507 287 Pfam PF00231 ATP synthase 5 286 1.8E-92 T 05-07-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AC028_RS14820 58c4ff077dabd6070b36826a84e22507 287 Gene3D G3DSA:3.40.1380.10 64 192 5.1E-44 T 05-07-2017 AC028_RS14820 58c4ff077dabd6070b36826a84e22507 287 Gene3D G3DSA:1.10.287.80 236 282 5.0E-30 T 05-07-2017 AC028_RS14820 58c4ff077dabd6070b36826a84e22507 287 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 6.2E-38 T 05-07-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AC028_RS14820 58c4ff077dabd6070b36826a84e22507 287 PRINTS PR00126 ATP synthase gamma subunit signature 167 184 6.2E-38 T 05-07-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AC028_RS14820 58c4ff077dabd6070b36826a84e22507 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 6.2E-38 T 05-07-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AC028_RS14820 58c4ff077dabd6070b36826a84e22507 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 6.2E-38 T 05-07-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AC028_RS14820 58c4ff077dabd6070b36826a84e22507 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 6.3E-106 T 05-07-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 AC028_RS14820 58c4ff077dabd6070b36826a84e22507 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 05-07-2017 IPR023632 ATPase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210 AC028_RS17345 e53c16832c68d974fd86a07ef396d613 92 Gene3D G3DSA:2.30.30.100 1 69 5.4E-37 T 05-07-2017 AC028_RS17345 e53c16832c68d974fd86a07ef396d613 92 SUPERFAMILY SSF50182 7 68 6.93E-24 T 05-07-2017 IPR010920 LSM domain AC028_RS17345 e53c16832c68d974fd86a07ef396d613 92 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 9.7E-30 T 05-07-2017 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AC028_RS17345 e53c16832c68d974fd86a07ef396d613 92 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.333 T 05-07-2017 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AC028_RS18555 5f0623be84636d1c19baaa2a683a007e 127 SMART SM00448 4 117 3.5E-20 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS18555 5f0623be84636d1c19baaa2a683a007e 127 SUPERFAMILY SSF52172 1 121 1.99E-27 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS18555 5f0623be84636d1c19baaa2a683a007e 127 Pfam PF00072 Response regulator receiver domain 6 114 4.0E-22 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS18555 5f0623be84636d1c19baaa2a683a007e 127 Gene3D G3DSA:3.40.50.2300 2 125 6.6E-28 T 05-07-2017 AC028_RS20440 0df354871b4acff4b2c2302988ad6659 538 Gene3D G3DSA:3.90.1580.10 259 537 1.6E-69 T 05-07-2017 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AC028_RS20440 0df354871b4acff4b2c2302988ad6659 538 SUPERFAMILY SSF56436 262 537 4.47E-66 T 05-07-2017 IPR016187 C-type lectin fold AC028_RS20440 0df354871b4acff4b2c2302988ad6659 538 Pfam PF03781 Sulfatase-modifying factor enzyme 1 263 536 2.6E-67 T 05-07-2017 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AC028_RS07295 6b18fb4e4c032f01a983fb9c84b2da82 207 Gene3D G3DSA:3.40.50.1000 80 204 3.7E-24 T 05-07-2017 IPR023214 HAD-like domain AC028_RS07295 6b18fb4e4c032f01a983fb9c84b2da82 207 Gene3D G3DSA:3.40.50.1000 3 16 3.7E-24 T 05-07-2017 IPR023214 HAD-like domain AC028_RS07295 6b18fb4e4c032f01a983fb9c84b2da82 207 SUPERFAMILY SSF56784 1 204 2.58E-33 T 05-07-2017 IPR023214 HAD-like domain AC028_RS07295 6b18fb4e4c032f01a983fb9c84b2da82 207 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 176 2.9E-22 T 05-07-2017 IPR023214 HAD-like domain AC028_RS14550 d663de93f19ce977b8c59e07a6037283 545 PRINTS PR01084 Na+/H+ exchanger signature 119 129 4.2E-5 T 05-07-2017 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: R-HSA-425986 AC028_RS14550 d663de93f19ce977b8c59e07a6037283 545 PRINTS PR01084 Na+/H+ exchanger signature 69 83 4.2E-5 T 05-07-2017 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: R-HSA-425986 AC028_RS14550 d663de93f19ce977b8c59e07a6037283 545 PRINTS PR01084 Na+/H+ exchanger signature 55 66 4.2E-5 T 05-07-2017 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: R-HSA-425986 AC028_RS14550 d663de93f19ce977b8c59e07a6037283 545 Pfam PF00999 Sodium/hydrogen exchanger family 11 419 2.2E-65 T 05-07-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AC028_RS14550 d663de93f19ce977b8c59e07a6037283 545 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 8 540 5.7E-122 T 05-07-2017 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 AC028_RS11145 e702467c5f3043f4c15e512e5fa8b858 224 Pfam PF07729 FCD domain 81 215 1.3E-17 T 05-07-2017 IPR011711 GntR, C-terminal AC028_RS11145 e702467c5f3043f4c15e512e5fa8b858 224 Gene3D G3DSA:1.10.10.10 9 71 1.9E-18 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS11145 e702467c5f3043f4c15e512e5fa8b858 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 1.7E-5 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS11145 e702467c5f3043f4c15e512e5fa8b858 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 1.7E-5 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS11145 e702467c5f3043f4c15e512e5fa8b858 224 Gene3D G3DSA:1.20.120.530 74 219 2.0E-18 T 05-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal AC028_RS11145 e702467c5f3043f4c15e512e5fa8b858 224 SUPERFAMILY SSF48008 77 219 3.14E-18 T 05-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal AC028_RS11145 e702467c5f3043f4c15e512e5fa8b858 224 SUPERFAMILY SSF46785 9 74 5.37E-17 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS11145 e702467c5f3043f4c15e512e5fa8b858 224 SMART SM00345 12 70 8.1E-11 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS11145 e702467c5f3043f4c15e512e5fa8b858 224 SMART SM00895 80 217 3.7E-19 T 05-07-2017 IPR011711 GntR, C-terminal AC028_RS11145 e702467c5f3043f4c15e512e5fa8b858 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 70 7.9E-14 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS11940 5d76b23465d91b4078ac64886a9604e6 360 SUPERFAMILY SSF110997 284 357 4.18E-16 T 05-07-2017 IPR007730 Sporulation-related domain GO:0042834 AC028_RS11940 5d76b23465d91b4078ac64886a9604e6 360 SUPERFAMILY SSF110997 104 165 1.22E-9 T 05-07-2017 IPR007730 Sporulation-related domain GO:0042834 AC028_RS11940 5d76b23465d91b4078ac64886a9604e6 360 Pfam PF05036 Sporulation related domain 102 179 1.0E-14 T 05-07-2017 IPR007730 Sporulation-related domain GO:0042834 AC028_RS11940 5d76b23465d91b4078ac64886a9604e6 360 Pfam PF05036 Sporulation related domain 285 357 7.9E-17 T 05-07-2017 IPR007730 Sporulation-related domain GO:0042834 AC028_RS11940 5d76b23465d91b4078ac64886a9604e6 360 Gene3D G3DSA:3.30.70.1070 99 168 5.4E-14 T 05-07-2017 IPR007730 Sporulation-related domain GO:0042834 AC028_RS11940 5d76b23465d91b4078ac64886a9604e6 360 Gene3D G3DSA:3.30.70.1070 279 357 8.7E-20 T 05-07-2017 IPR007730 Sporulation-related domain GO:0042834 AC028_RS10760 e6df75275755e3d991d83bf400c7497e 304 SUPERFAMILY SSF52540 22 288 1.56E-56 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10760 e6df75275755e3d991d83bf400c7497e 304 Pfam PF00685 Sulfotransferase domain 31 282 4.1E-41 T 05-07-2017 IPR000863 Sulfotransferase domain GO:0008146 AC028_RS10760 e6df75275755e3d991d83bf400c7497e 304 Gene3D G3DSA:3.40.50.300 22 289 2.6E-61 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS00530 dd2a7718a9f80df40c4320c4ec3f555e 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 05-07-2017 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AC028_RS00530 dd2a7718a9f80df40c4320c4ec3f555e 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 05-07-2017 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AC028_RS00530 dd2a7718a9f80df40c4320c4ec3f555e 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 1.7E-32 T 05-07-2017 IPR000032 Phosphocarrier protein HPr-like AC028_RS00530 dd2a7718a9f80df40c4320c4ec3f555e 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.3E-26 T 05-07-2017 IPR000032 Phosphocarrier protein HPr-like AC028_RS00530 dd2a7718a9f80df40c4320c4ec3f555e 89 SUPERFAMILY SSF55594 1 88 8.11E-27 T 05-07-2017 IPR000032 Phosphocarrier protein HPr-like AC028_RS00530 dd2a7718a9f80df40c4320c4ec3f555e 89 Gene3D G3DSA:3.30.1340.10 1 87 8.3E-30 T 05-07-2017 IPR000032 Phosphocarrier protein HPr-like AC028_RS00530 dd2a7718a9f80df40c4320c4ec3f555e 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.0E-16 T 05-07-2017 IPR000032 Phosphocarrier protein HPr-like AC028_RS00530 dd2a7718a9f80df40c4320c4ec3f555e 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.0E-16 T 05-07-2017 IPR000032 Phosphocarrier protein HPr-like AC028_RS00530 dd2a7718a9f80df40c4320c4ec3f555e 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.0E-16 T 05-07-2017 IPR000032 Phosphocarrier protein HPr-like AC028_RS19795 46c31090f237dba8f27a32da6c2ed767 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 266 8.8E-22 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS19795 46c31090f237dba8f27a32da6c2ed767 278 Gene3D G3DSA:1.10.3720.10 7 265 4.0E-64 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS19795 46c31090f237dba8f27a32da6c2ed767 278 SUPERFAMILY SSF161098 8 278 1.03E-72 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS12515 8a341aec8dfc1e4745a51fa5231b0e67 330 Gene3D G3DSA:3.40.1350.10 187 305 7.8E-11 T 05-07-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 AC028_RS12515 8a341aec8dfc1e4745a51fa5231b0e67 330 PIRSF PIRSF031853 1 330 4.0E-150 T 05-07-2017 IPR016984 Uncharacterised conserved protein UCP031853 AC028_RS12515 8a341aec8dfc1e4745a51fa5231b0e67 330 SUPERFAMILY SSF52980 197 309 1.07E-11 T 05-07-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AC028_RS12515 8a341aec8dfc1e4745a51fa5231b0e67 330 Pfam PF04471 Restriction endonuclease 194 305 2.7E-23 T 05-07-2017 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 AC028_RS12700 88d149a23c6e422e3dbedd067c7e7b99 200 Gene3D G3DSA:3.40.50.300 46 158 1.2E-38 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12700 88d149a23c6e422e3dbedd067c7e7b99 200 SUPERFAMILY SSF52540 45 158 6.27E-31 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12700 88d149a23c6e422e3dbedd067c7e7b99 200 PIRSF PIRSF037290 1 199 5.6E-81 T 05-07-2017 IPR017166 Uncharacterised conserved protein UCP037290 AC028_RS18970 c2bc1222434278ca68ad2a9119807afc 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 05-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AC028_RS18970 c2bc1222434278ca68ad2a9119807afc 252 SUPERFAMILY SSF51735 2 251 1.63E-68 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS18970 c2bc1222434278ca68ad2a9119807afc 252 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 2 252 3.1E-110 T 05-07-2017 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 AC028_RS18970 c2bc1222434278ca68ad2a9119807afc 252 Gene3D G3DSA:3.40.50.720 3 250 1.4E-69 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS18970 c2bc1222434278ca68ad2a9119807afc 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 5.7E-9 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18970 c2bc1222434278ca68ad2a9119807afc 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 5.7E-9 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18970 c2bc1222434278ca68ad2a9119807afc 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 5.7E-9 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18970 c2bc1222434278ca68ad2a9119807afc 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 250 5.6E-47 T 05-07-2017 AC028_RS18970 c2bc1222434278ca68ad2a9119807afc 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 3.2E-30 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18970 c2bc1222434278ca68ad2a9119807afc 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 3.2E-30 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18970 c2bc1222434278ca68ad2a9119807afc 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 3.2E-30 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18970 c2bc1222434278ca68ad2a9119807afc 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 3.2E-30 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18970 c2bc1222434278ca68ad2a9119807afc 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.2E-30 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18970 c2bc1222434278ca68ad2a9119807afc 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 3.2E-30 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07905 22de68d19816274a4da5fb38a98014b0 1032 SUPERFAMILY SSF82866 299 493 5.75E-34 T 05-07-2017 AC028_RS07905 22de68d19816274a4da5fb38a98014b0 1032 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 2.0E-21 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS07905 22de68d19816274a4da5fb38a98014b0 1032 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 2.0E-21 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS07905 22de68d19816274a4da5fb38a98014b0 1032 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 2.0E-21 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS07905 22de68d19816274a4da5fb38a98014b0 1032 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 2.0E-21 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS07905 22de68d19816274a4da5fb38a98014b0 1032 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 2.0E-21 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS07905 22de68d19816274a4da5fb38a98014b0 1032 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 2.0E-21 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS07905 22de68d19816274a4da5fb38a98014b0 1032 Pfam PF00873 AcrB/AcrD/AcrF family 9 1010 2.5E-142 T 05-07-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AC028_RS07905 22de68d19816274a4da5fb38a98014b0 1032 Gene3D G3DSA:3.30.2090.10 191 272 4.9E-11 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS07905 22de68d19816274a4da5fb38a98014b0 1032 SUPERFAMILY SSF82714 190 271 1.31E-12 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS07905 22de68d19816274a4da5fb38a98014b0 1032 SUPERFAMILY SSF82714 710 795 3.92E-14 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS07905 22de68d19816274a4da5fb38a98014b0 1032 Gene3D G3DSA:1.10.3850.10 802 1014 9.5E-47 T 05-07-2017 AC028_RS07905 22de68d19816274a4da5fb38a98014b0 1032 Gene3D G3DSA:1.10.3850.10 279 491 1.6E-40 T 05-07-2017 AC028_RS07905 22de68d19816274a4da5fb38a98014b0 1032 Gene3D G3DSA:3.30.70.1430 561 644 2.1E-5 T 05-07-2017 AC028_RS07905 22de68d19816274a4da5fb38a98014b0 1032 SUPERFAMILY SSF82866 794 1017 5.36E-42 T 05-07-2017 AC028_RS07905 22de68d19816274a4da5fb38a98014b0 1032 SUPERFAMILY SSF82693 273 328 1.41E-13 T 05-07-2017 AC028_RS07905 22de68d19816274a4da5fb38a98014b0 1032 SUPERFAMILY SSF82693 144 187 1.41E-13 T 05-07-2017 AC028_RS07905 22de68d19816274a4da5fb38a98014b0 1032 SUPERFAMILY SSF82693 45 140 5.58E-16 T 05-07-2017 AC028_RS07905 22de68d19816274a4da5fb38a98014b0 1032 Gene3D G3DSA:3.30.2090.10 709 794 5.8E-14 T 05-07-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AC028_RS07905 22de68d19816274a4da5fb38a98014b0 1032 SUPERFAMILY SSF82693 557 642 2.01E-6 T 05-07-2017 AC028_RS07905 22de68d19816274a4da5fb38a98014b0 1032 Gene3D G3DSA:3.30.70.1430 45 147 9.6E-17 T 05-07-2017 AC028_RS03120 2a03097144db3f50c5a65904fe2bd431 635 Pfam PF13641 Glycosyltransferase like family 2 258 482 6.9E-25 T 05-07-2017 AC028_RS03120 2a03097144db3f50c5a65904fe2bd431 635 SUPERFAMILY SSF53448 259 507 7.5E-42 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS03120 2a03097144db3f50c5a65904fe2bd431 635 Gene3D G3DSA:3.90.550.10 258 493 1.1E-19 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS03120 2a03097144db3f50c5a65904fe2bd431 635 SUPERFAMILY SSF160246 23 155 8.37E-24 T 05-07-2017 AC028_RS03120 2a03097144db3f50c5a65904fe2bd431 635 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 27 160 5.1E-16 T 05-07-2017 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 AC028_RS11395 9059d15499cc546e0d722d99e9c21a85 485 Pfam PF02233 NAD(P) transhydrogenase beta subunit 15 475 7.0E-165 T 05-07-2017 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AC028_RS11395 9059d15499cc546e0d722d99e9c21a85 485 SUPERFAMILY SSF52467 306 478 7.73E-70 T 05-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AC028_RS11395 9059d15499cc546e0d722d99e9c21a85 485 Gene3D G3DSA:3.40.50.1220 302 479 3.9E-80 T 05-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AC028_RS11395 9059d15499cc546e0d722d99e9c21a85 485 PIRSF PIRSF000204 8 479 2.2E-158 T 05-07-2017 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AC028_RS12160 c1968404a277d8e88074dd6b671f43d7 249 Gene3D G3DSA:1.10.510.10 157 233 1.1E-11 T 05-07-2017 AC028_RS12160 c1968404a277d8e88074dd6b671f43d7 249 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 10 243 38.995 T 05-07-2017 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 AC028_RS12160 c1968404a277d8e88074dd6b671f43d7 249 SUPERFAMILY SSF56112 46 201 1.35E-16 T 05-07-2017 IPR011009 Protein kinase-like domain AC028_RS12160 c1968404a277d8e88074dd6b671f43d7 249 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 40 241 4.2E-68 T 05-07-2017 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 AC028_RS10885 1db502ebf6ff06d53f4aebcd2829f850 743 Pfam PF00593 TonB dependent receptor 484 741 4.5E-34 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS10885 1db502ebf6ff06d53f4aebcd2829f850 743 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 41 743 6.9E-110 T 05-07-2017 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AC028_RS10885 1db502ebf6ff06d53f4aebcd2829f850 743 SUPERFAMILY SSF56935 36 743 1.39E-112 T 05-07-2017 AC028_RS10885 1db502ebf6ff06d53f4aebcd2829f850 743 Gene3D G3DSA:2.40.170.20 170 742 6.9E-97 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS10885 1db502ebf6ff06d53f4aebcd2829f850 743 Gene3D G3DSA:2.170.130.10 53 169 2.6E-41 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS10885 1db502ebf6ff06d53f4aebcd2829f850 743 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 41 743 3.2E-125 T 05-07-2017 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AC028_RS10885 1db502ebf6ff06d53f4aebcd2829f850 743 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 165 1.0E-27 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS02035 24abeac24f552ada067305aaf203c0fb 237 SUPERFAMILY SSF56529 22 229 1.27E-63 T 05-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AC028_RS02035 24abeac24f552ada067305aaf203c0fb 237 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 26 228 1.0E-52 T 05-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AC028_RS02035 24abeac24f552ada067305aaf203c0fb 237 Gene3D G3DSA:3.90.850.10 22 228 1.0E-71 T 05-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AC028_RS12405 8ed56c05d5d191a3fd7abe3ecc8864b5 800 Gene3D G3DSA:3.40.710.10 245 631 9.8E-76 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS12405 8ed56c05d5d191a3fd7abe3ecc8864b5 800 Gene3D G3DSA:1.10.3810.10 75 244 1.1E-48 T 05-07-2017 AC028_RS12405 8ed56c05d5d191a3fd7abe3ecc8864b5 800 Pfam PF00905 Penicillin binding protein transpeptidase domain 319 539 7.6E-16 T 05-07-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AC028_RS12405 8ed56c05d5d191a3fd7abe3ecc8864b5 800 SUPERFAMILY SSF56601 224 648 5.18E-97 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS12405 8ed56c05d5d191a3fd7abe3ecc8864b5 800 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 50 798 2.2E-231 T 05-07-2017 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 AC028_RS12405 8ed56c05d5d191a3fd7abe3ecc8864b5 800 SUPERFAMILY SSF53955 56 272 1.07E-61 T 05-07-2017 IPR023346 Lysozyme-like domain AC028_RS12405 8ed56c05d5d191a3fd7abe3ecc8864b5 800 Pfam PF00912 Transglycosylase 68 242 3.1E-45 T 05-07-2017 IPR001264 Glycosyl transferase, family 51 AC028_RS12405 8ed56c05d5d191a3fd7abe3ecc8864b5 800 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 715 796 2.1E-14 T 05-07-2017 IPR009647 Penicillin-binding, C-terminal AC028_RS11200 1122ef31004d5385fb3d7cfe1ddbeda1 301 Gene3D G3DSA:2.120.10.30 41 298 1.3E-56 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS11200 1122ef31004d5385fb3d7cfe1ddbeda1 301 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 43 281 5.3E-45 T 05-07-2017 IPR013658 SMP-30/Gluconolactonase/LRE-like region AC028_RS11200 1122ef31004d5385fb3d7cfe1ddbeda1 301 SUPERFAMILY SSF63829 40 297 2.55E-59 T 05-07-2017 AC028_RS10460 5418d79bee17df42b7f7b96e78e9566a 174 Pfam PF03477 ATP cone domain 50 136 1.4E-13 T 05-07-2017 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AC028_RS10460 5418d79bee17df42b7f7b96e78e9566a 174 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.6E-58 T 05-07-2017 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AC028_RS10460 5418d79bee17df42b7f7b96e78e9566a 174 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 84.047 T 05-07-2017 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AC028_RS20645 4c6491c35da3dc7c3a83872e8dae6278 400 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 364 379 2.9E-6 T 05-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AC028_RS20645 4c6491c35da3dc7c3a83872e8dae6278 400 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 92 112 2.9E-6 T 05-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AC028_RS20645 4c6491c35da3dc7c3a83872e8dae6278 400 Gene3D G3DSA:2.40.50.100 81 114 3.0E-21 T 05-07-2017 AC028_RS20645 4c6491c35da3dc7c3a83872e8dae6278 400 Gene3D G3DSA:2.40.50.100 245 280 3.0E-21 T 05-07-2017 AC028_RS20645 4c6491c35da3dc7c3a83872e8dae6278 400 SUPERFAMILY SSF111369 80 169 7.06E-13 T 05-07-2017 AC028_RS20645 4c6491c35da3dc7c3a83872e8dae6278 400 Pfam PF13533 Biotin-lipoyl like 81 129 1.7E-16 T 05-07-2017 AC028_RS20645 4c6491c35da3dc7c3a83872e8dae6278 400 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 192 323 2.4E-15 T 05-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_RS20645 4c6491c35da3dc7c3a83872e8dae6278 400 SUPERFAMILY SSF111369 190 319 1.57E-10 T 05-07-2017 AC028_RS08205 1c8511a896316f16f857a4b2b0829c27 296 ProSitePatterns PS00893 Nudix box signature. 193 214 - T 05-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AC028_RS08205 1c8511a896316f16f857a4b2b0829c27 296 SUPERFAMILY SSF55811 112 292 1.49E-40 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS08205 1c8511a896316f16f857a4b2b0829c27 296 Gene3D G3DSA:3.90.79.10 118 293 4.6E-45 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS08205 1c8511a896316f16f857a4b2b0829c27 296 Pfam PF00293 NUDIX domain 164 267 2.2E-15 T 05-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AC028_RS08205 1c8511a896316f16f857a4b2b0829c27 296 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 128 158 1.5E-8 T 05-07-2017 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 AC028_RS07740 1547b2dfab41bd75b7bb7b81629d3320 148 Pfam PF00582 Universal stress protein family 1 148 1.4E-33 T 05-07-2017 IPR006016 UspA GO:0006950 AC028_RS07740 1547b2dfab41bd75b7bb7b81629d3320 148 PRINTS PR01438 Universal stress protein signature 108 120 3.5E-15 T 05-07-2017 IPR006015 Universal stress protein A AC028_RS07740 1547b2dfab41bd75b7bb7b81629d3320 148 PRINTS PR01438 Universal stress protein signature 2 20 3.5E-15 T 05-07-2017 IPR006015 Universal stress protein A AC028_RS07740 1547b2dfab41bd75b7bb7b81629d3320 148 PRINTS PR01438 Universal stress protein signature 126 148 3.5E-15 T 05-07-2017 IPR006015 Universal stress protein A AC028_RS07740 1547b2dfab41bd75b7bb7b81629d3320 148 PIRSF PIRSF006276 1 148 6.5E-18 T 05-07-2017 IPR006015 Universal stress protein A AC028_RS07740 1547b2dfab41bd75b7bb7b81629d3320 148 SUPERFAMILY SSF52402 2 148 1.59E-35 T 05-07-2017 AC028_RS07740 1547b2dfab41bd75b7bb7b81629d3320 148 Gene3D G3DSA:3.40.50.620 1 148 4.6E-35 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS10915 d55473dbe60dca2c239e079a06e9f945 348 Pfam PF13379 NMT1-like family 37 281 2.7E-21 T 05-07-2017 AC028_RS10915 d55473dbe60dca2c239e079a06e9f945 348 SUPERFAMILY SSF53850 40 280 3.04E-28 T 05-07-2017 AC028_RS21125 14f10a7f711180d64cb37a7dd5dd4f6e 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.283 T 05-07-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AC028_RS21125 14f10a7f711180d64cb37a7dd5dd4f6e 91 PIRSF PIRSF029827 1 90 7.7E-41 T 05-07-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AC028_RS21125 14f10a7f711180d64cb37a7dd5dd4f6e 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 77 1.0E-40 T 05-07-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AC028_RS21125 14f10a7f711180d64cb37a7dd5dd4f6e 91 Gene3D G3DSA:1.10.3880.10 1 88 1.6E-38 T 05-07-2017 AC028_RS21125 14f10a7f711180d64cb37a7dd5dd4f6e 91 SUPERFAMILY SSF111148 1 88 1.2E-36 T 05-07-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AC028_RS21125 14f10a7f711180d64cb37a7dd5dd4f6e 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 8.3E-40 T 05-07-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AC028_RS19620 2969da7d6c4caa550b80b0d28089e238 522 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 69 110 7.6E-9 T 05-07-2017 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS19620 2969da7d6c4caa550b80b0d28089e238 522 Pfam PF00361 Proton-conducting membrane transporter 127 345 4.4E-41 T 05-07-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS19620 2969da7d6c4caa550b80b0d28089e238 522 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 151 172 1.8E-23 T 05-07-2017 AC028_RS19620 2969da7d6c4caa550b80b0d28089e238 522 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 239 265 1.8E-23 T 05-07-2017 AC028_RS19620 2969da7d6c4caa550b80b0d28089e238 522 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 76 101 1.8E-23 T 05-07-2017 AC028_RS19620 2969da7d6c4caa550b80b0d28089e238 522 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 217 238 1.8E-23 T 05-07-2017 AC028_RS19620 2969da7d6c4caa550b80b0d28089e238 522 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 306 318 1.8E-23 T 05-07-2017 AC028_RS16390 cca7ec30aa0f88ab2a95e87147d5cb7d 436 SUPERFAMILY SSF103473 23 424 9.55E-40 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS16390 cca7ec30aa0f88ab2a95e87147d5cb7d 436 Gene3D G3DSA:1.20.1250.20 26 229 1.4E-19 T 05-07-2017 AC028_RS16390 cca7ec30aa0f88ab2a95e87147d5cb7d 436 Pfam PF07690 Major Facilitator Superfamily 31 382 5.9E-23 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS16390 cca7ec30aa0f88ab2a95e87147d5cb7d 436 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 25 421 2.9E-91 T 05-07-2017 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 AC028_RS16390 cca7ec30aa0f88ab2a95e87147d5cb7d 436 Gene3D G3DSA:1.20.1250.20 257 420 9.6E-8 T 05-07-2017 AC028_RS16390 cca7ec30aa0f88ab2a95e87147d5cb7d 436 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 104 420 9.9E-94 T 05-07-2017 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 AC028_RS02340 e9c36a810dc673ea3ba5b6c8497bc783 432 Pfam PF05569 BlaR1 peptidase M56 7 256 2.6E-73 T 05-07-2017 IPR008756 Peptidase M56 AC028_RS02340 e9c36a810dc673ea3ba5b6c8497bc783 432 SUPERFAMILY SSF74653 308 384 2.22E-18 T 05-07-2017 AC028_RS02340 e9c36a810dc673ea3ba5b6c8497bc783 432 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 309 386 8.8E-19 T 05-07-2017 IPR006260 TonB, C-terminal GO:0006810 AC028_RS02340 e9c36a810dc673ea3ba5b6c8497bc783 432 Gene3D G3DSA:3.30.1150.10 308 387 2.7E-11 T 05-07-2017 AC028_RS02340 e9c36a810dc673ea3ba5b6c8497bc783 432 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 310 386 1.5E-16 T 05-07-2017 IPR006260 TonB, C-terminal GO:0006810 AC028_RS00300 3075c25ff2c73bcdaf6d0f78db16f651 180 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 10 178 1.1E-50 T 05-07-2017 IPR006286 Peptidase C56, PfpI AC028_RS00300 3075c25ff2c73bcdaf6d0f78db16f651 180 Gene3D G3DSA:3.40.50.880 4 179 1.4E-58 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS00300 3075c25ff2c73bcdaf6d0f78db16f651 180 Pfam PF01965 DJ-1/PfpI family 8 176 9.4E-51 T 05-07-2017 IPR002818 DJ-1/PfpI AC028_RS00300 3075c25ff2c73bcdaf6d0f78db16f651 180 SUPERFAMILY SSF52317 7 178 5.16E-48 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS00495 21a14078470e3ecfc2e1c588b9fc376b 239 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 213 234 3.9E-6 T 05-07-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AC028_RS00495 21a14078470e3ecfc2e1c588b9fc376b 239 SUPERFAMILY SSF52540 2 235 3.29E-64 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS00495 21a14078470e3ecfc2e1c588b9fc376b 239 Pfam PF00005 ABC transporter 20 164 1.1E-32 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS00495 21a14078470e3ecfc2e1c588b9fc376b 239 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 2 239 4.8E-115 T 05-07-2017 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 AC028_RS00495 21a14078470e3ecfc2e1c588b9fc376b 239 Gene3D G3DSA:3.40.50.300 2 232 1.2E-68 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS00495 21a14078470e3ecfc2e1c588b9fc376b 239 SMART SM00382 26 229 1.9E-7 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS02685 54a2bb5e6b89288d2d6d675d1b26348f 429 Pfam PF00202 Aminotransferase class-III 36 396 1.0E-76 T 05-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AC028_RS02685 54a2bb5e6b89288d2d6d675d1b26348f 429 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 427 103.415 T 05-07-2017 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AC028_RS02685 54a2bb5e6b89288d2d6d675d1b26348f 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 05-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AC028_RS02685 54a2bb5e6b89288d2d6d675d1b26348f 429 SUPERFAMILY SSF53383 1 426 4.23E-128 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS02685 54a2bb5e6b89288d2d6d675d1b26348f 429 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 426 3.6E-188 T 05-07-2017 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AC028_RS02685 54a2bb5e6b89288d2d6d675d1b26348f 429 Gene3D G3DSA:3.90.1150.10 2 71 1.2E-41 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS02685 54a2bb5e6b89288d2d6d675d1b26348f 429 Gene3D G3DSA:3.90.1150.10 321 426 1.2E-41 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS02685 54a2bb5e6b89288d2d6d675d1b26348f 429 Gene3D G3DSA:3.40.640.10 72 318 4.3E-80 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS11990 e9c618ae339584516ec319341af30e3a 508 Gene3D G3DSA:3.30.420.150 141 314 1.6E-49 T 05-07-2017 AC028_RS11990 e9c618ae339584516ec319341af30e3a 508 SUPERFAMILY SSF109604 319 496 1.78E-47 T 05-07-2017 AC028_RS11990 e9c618ae339584516ec319341af30e3a 508 Gene3D G3DSA:3.30.420.40 14 135 8.6E-39 T 05-07-2017 AC028_RS11990 e9c618ae339584516ec319341af30e3a 508 SUPERFAMILY SSF53067 17 137 3.37E-32 T 05-07-2017 AC028_RS11990 e9c618ae339584516ec319341af30e3a 508 Pfam PF02541 Ppx/GppA phosphatase family 30 313 7.1E-65 T 05-07-2017 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AC028_RS11990 e9c618ae339584516ec319341af30e3a 508 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 17 312 1.1E-98 T 05-07-2017 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 AC028_RS11990 e9c618ae339584516ec319341af30e3a 508 PIRSF PIRSF001267 7 508 7.9E-201 T 05-07-2017 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AC028_RS11990 e9c618ae339584516ec319341af30e3a 508 SUPERFAMILY SSF53067 142 314 1.88E-43 T 05-07-2017 AC028_RS18755 9fcda285be65847b28d6b0fdc97f8fca 642 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 54 222 3.4E-33 T 05-07-2017 IPR024618 Domain of unknown function DUF3857 AC028_RS18755 9fcda285be65847b28d6b0fdc97f8fca 642 SUPERFAMILY SSF54001 264 345 5.89E-9 T 05-07-2017 AC028_RS18755 9fcda285be65847b28d6b0fdc97f8fca 642 Pfam PF01841 Transglutaminase-like superfamily 269 342 4.2E-8 T 05-07-2017 IPR002931 Transglutaminase-like AC028_RS13670 a7e9d260f24f4fb0fc795e4813f25211 148 Gene3D G3DSA:1.10.10.410 91 147 3.1E-22 T 05-07-2017 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AC028_RS13670 a7e9d260f24f4fb0fc795e4813f25211 148 Gene3D G3DSA:1.10.1510.10 1 90 7.4E-34 T 05-07-2017 AC028_RS13670 a7e9d260f24f4fb0fc795e4813f25211 148 Pfam PF09424 Yqey-like protein 4 146 2.4E-54 T 05-07-2017 IPR019004 Uncharacterised domain YOR215C, mitochondrial AC028_RS13670 a7e9d260f24f4fb0fc795e4813f25211 148 SUPERFAMILY SSF89095 1 146 7.85E-43 T 05-07-2017 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 AC028_RS16505 778cecd7571df8e9f11216c7cd996778 1011 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 848 1009 1.1E-43 T 05-07-2017 IPR000160 GGDEF domain AC028_RS16505 778cecd7571df8e9f11216c7cd996778 1011 Gene3D G3DSA:2.120.10.30 295 516 5.0E-12 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS16505 778cecd7571df8e9f11216c7cd996778 1011 Pfam PF07495 Y_Y_Y domain 707 768 8.2E-15 T 05-07-2017 IPR011123 Two component regulator three Y AC028_RS16505 778cecd7571df8e9f11216c7cd996778 1011 SUPERFAMILY SSF55073 856 1010 2.59E-44 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS16505 778cecd7571df8e9f11216c7cd996778 1011 Gene3D G3DSA:2.120.10.30 122 262 2.1E-10 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS16505 778cecd7571df8e9f11216c7cd996778 1011 Gene3D G3DSA:3.30.70.270 854 1010 1.3E-49 T 05-07-2017 AC028_RS16505 778cecd7571df8e9f11216c7cd996778 1011 SUPERFAMILY SSF63829 237 515 1.96E-13 T 05-07-2017 AC028_RS16505 778cecd7571df8e9f11216c7cd996778 1011 Pfam PF07494 Two component regulator propeller 70 92 0.0022 T 05-07-2017 IPR011110 Two component regulator propeller AC028_RS16505 778cecd7571df8e9f11216c7cd996778 1011 Pfam PF07494 Two component regulator propeller 284 303 0.017 T 05-07-2017 IPR011110 Two component regulator propeller AC028_RS16505 778cecd7571df8e9f11216c7cd996778 1011 Pfam PF07494 Two component regulator propeller 363 384 0.0072 T 05-07-2017 IPR011110 Two component regulator propeller AC028_RS16505 778cecd7571df8e9f11216c7cd996778 1011 SUPERFAMILY SSF63829 63 181 3.14E-9 T 05-07-2017 AC028_RS16505 778cecd7571df8e9f11216c7cd996778 1011 SMART SM00267 840 1011 5.8E-54 T 05-07-2017 IPR000160 GGDEF domain AC028_RS16505 778cecd7571df8e9f11216c7cd996778 1011 Pfam PF00990 Diguanylate cyclase, GGDEF domain 851 1007 9.5E-44 T 05-07-2017 IPR000160 GGDEF domain AC028_RS05620 775128d47a57b9e9d414d958c1aecdd2 692 Gene3D G3DSA:1.10.1370.10 157 363 6.6E-115 T 05-07-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AC028_RS05620 775128d47a57b9e9d414d958c1aecdd2 692 Gene3D G3DSA:1.10.1370.10 516 690 6.6E-115 T 05-07-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AC028_RS05620 775128d47a57b9e9d414d958c1aecdd2 692 Gene3D G3DSA:3.40.390.10 373 515 7.0E-53 T 05-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AC028_RS05620 775128d47a57b9e9d414d958c1aecdd2 692 Gene3D G3DSA:1.20.1050.40 23 154 2.5E-22 T 05-07-2017 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal AC028_RS05620 775128d47a57b9e9d414d958c1aecdd2 692 SUPERFAMILY SSF55486 16 689 1.87E-181 T 05-07-2017 AC028_RS05620 775128d47a57b9e9d414d958c1aecdd2 692 Pfam PF01432 Peptidase family M3 241 689 7.2E-135 T 05-07-2017 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 AC028_RS20555 75a049704659898396e89ce227a6d762 327 Gene3D G3DSA:1.10.530.10 190 320 2.8E-46 T 05-07-2017 AC028_RS20555 75a049704659898396e89ce227a6d762 327 SUPERFAMILY SSF53955 192 321 3.97E-45 T 05-07-2017 IPR023346 Lysozyme-like domain AC028_RS20555 75a049704659898396e89ce227a6d762 327 Pfam PF01464 Transglycosylase SLT domain 201 299 1.7E-27 T 05-07-2017 IPR008258 Transglycosylase SLT domain 1 AC028_RS20555 75a049704659898396e89ce227a6d762 327 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 218 246 - T 05-07-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AC028_RS09950 79bcf222331b9b5351f32383fbaac690 195 Pfam PF00702 haloacid dehalogenase-like hydrolase 54 162 3.9E-15 T 05-07-2017 AC028_RS09950 79bcf222331b9b5351f32383fbaac690 195 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 8 162 5.1E-10 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS09950 79bcf222331b9b5351f32383fbaac690 195 Gene3D G3DSA:3.40.50.1000 67 191 3.1E-29 T 05-07-2017 IPR023214 HAD-like domain AC028_RS09950 79bcf222331b9b5351f32383fbaac690 195 Gene3D G3DSA:3.40.50.1000 4 18 3.1E-29 T 05-07-2017 IPR023214 HAD-like domain AC028_RS09950 79bcf222331b9b5351f32383fbaac690 195 SUPERFAMILY SSF56784 2 191 8.67E-36 T 05-07-2017 IPR023214 HAD-like domain AC028_RS09950 79bcf222331b9b5351f32383fbaac690 195 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 6 168 6.7E-9 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS08095 1ffcb2aa5dd23f57e150b4d7993c4b3f 345 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 9 336 5.4E-123 T 05-07-2017 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AC028_RS08095 1ffcb2aa5dd23f57e150b4d7993c4b3f 345 Pfam PF00591 Glycosyl transferase family, a/b domain 77 327 4.5E-92 T 05-07-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AC028_RS08095 1ffcb2aa5dd23f57e150b4d7993c4b3f 345 Gene3D G3DSA:1.20.970.10 6 71 5.2E-26 T 05-07-2017 AC028_RS08095 1ffcb2aa5dd23f57e150b4d7993c4b3f 345 Gene3D G3DSA:3.40.1030.10 76 339 2.2E-104 T 05-07-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AC028_RS08095 1ffcb2aa5dd23f57e150b4d7993c4b3f 345 SUPERFAMILY SSF52418 77 340 1.15E-92 T 05-07-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AC028_RS08095 1ffcb2aa5dd23f57e150b4d7993c4b3f 345 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 68 1.6E-13 T 05-07-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AC028_RS08095 1ffcb2aa5dd23f57e150b4d7993c4b3f 345 SUPERFAMILY SSF47648 4 72 4.06E-18 T 05-07-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AC028_RS08095 1ffcb2aa5dd23f57e150b4d7993c4b3f 345 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 337 36.78 T 05-07-2017 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AC028_RS14250 5e19b4dd868b0113dfd1f0f5ef1b74cb 132 Gene3D G3DSA:3.30.1330.40 10 129 2.1E-35 T 05-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AC028_RS14250 5e19b4dd868b0113dfd1f0f5ef1b74cb 132 SUPERFAMILY SSF55298 8 129 2.98E-32 T 05-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AC028_RS14250 5e19b4dd868b0113dfd1f0f5ef1b74cb 132 Pfam PF01042 Endoribonuclease L-PSP 13 126 1.5E-21 T 05-07-2017 IPR006175 YjgF/YER057c/UK114 family AC028_RS16030 5b243cb48906f2f5be9481626fc2e817 233 Pfam PF00072 Response regulator receiver domain 4 111 4.2E-24 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS16030 5b243cb48906f2f5be9481626fc2e817 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 218 3.5E-16 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS16030 5b243cb48906f2f5be9481626fc2e817 233 Gene3D G3DSA:1.10.10.10 124 220 5.7E-24 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS16030 5b243cb48906f2f5be9481626fc2e817 233 Gene3D G3DSA:3.40.50.2300 1 123 1.3E-35 T 05-07-2017 AC028_RS16030 5b243cb48906f2f5be9481626fc2e817 233 SMART SM00862 145 218 9.4E-19 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS16030 5b243cb48906f2f5be9481626fc2e817 233 SUPERFAMILY SSF52172 1 176 1.38E-36 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS16030 5b243cb48906f2f5be9481626fc2e817 233 SMART SM00448 1 112 3.7E-32 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS21055 c36f510b5519f33b00f932547963c4d6 528 Pfam PF13520 Amino acid permease 16 427 3.9E-44 T 05-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AC028_RS21055 c36f510b5519f33b00f932547963c4d6 528 PIRSF PIRSF006060 1 450 3.9E-74 T 05-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AC028_RS09495 14bc9ba344634d57c99920a695fa8f06 442 SUPERFAMILY SSF52540 97 365 2.41E-96 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS09495 14bc9ba344634d57c99920a695fa8f06 442 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 13 439 8.3E-170 T 05-07-2017 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AC028_RS09495 14bc9ba344634d57c99920a695fa8f06 442 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 350 359 - T 05-07-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AC028_RS09495 14bc9ba344634d57c99920a695fa8f06 442 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 359 2.0E-71 T 05-07-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AC028_RS09495 14bc9ba344634d57c99920a695fa8f06 442 Gene3D G3DSA:3.40.50.300 97 361 2.3E-93 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS09495 14bc9ba344634d57c99920a695fa8f06 442 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 93 1.4E-8 T 05-07-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AC028_RS09495 14bc9ba344634d57c99920a695fa8f06 442 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 23 439 1.4E-192 T 05-07-2017 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AC028_RS09495 14bc9ba344634d57c99920a695fa8f06 442 SMART SM00382 162 344 3.9E-7 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS03615 26a9c4bf27e6c1b8f4c0e70496be6b0e 196 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 185 1.4E-22 T 05-07-2017 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 AC028_RS03615 26a9c4bf27e6c1b8f4c0e70496be6b0e 196 Gene3D G3DSA:3.40.50.1000 79 186 9.8E-21 T 05-07-2017 IPR023214 HAD-like domain AC028_RS03615 26a9c4bf27e6c1b8f4c0e70496be6b0e 196 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 189 2.9E-30 T 05-07-2017 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial AC028_RS03615 26a9c4bf27e6c1b8f4c0e70496be6b0e 196 SUPERFAMILY SSF56784 2 186 7.58E-22 T 05-07-2017 IPR023214 HAD-like domain AC028_RS03615 26a9c4bf27e6c1b8f4c0e70496be6b0e 196 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 182 1.0E-29 T 05-07-2017 AC028_RS14615 ea4e9dd6b49df931a7dc34056cf0f818 429 Gene3D G3DSA:3.40.50.720 194 268 1.5E-46 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS14615 ea4e9dd6b49df931a7dc34056cf0f818 429 Gene3D G3DSA:3.40.50.720 354 416 1.5E-46 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS14615 ea4e9dd6b49df931a7dc34056cf0f818 429 Gene3D G3DSA:3.40.50.720 1 96 1.5E-46 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS14615 ea4e9dd6b49df931a7dc34056cf0f818 429 Gene3D G3DSA:3.30.9.10 269 353 3.5E-17 T 05-07-2017 AC028_RS14615 ea4e9dd6b49df931a7dc34056cf0f818 429 Gene3D G3DSA:3.30.9.10 135 193 3.5E-17 T 05-07-2017 AC028_RS14615 ea4e9dd6b49df931a7dc34056cf0f818 429 Pfam PF01266 FAD dependent oxidoreductase 3 398 2.7E-67 T 05-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AC028_RS14615 ea4e9dd6b49df931a7dc34056cf0f818 429 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 49.155 T 05-07-2017 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 AC028_RS14615 ea4e9dd6b49df931a7dc34056cf0f818 429 SUPERFAMILY SSF54373 270 360 1.09E-18 T 05-07-2017 AC028_RS14615 ea4e9dd6b49df931a7dc34056cf0f818 429 SUPERFAMILY SSF51905 1 54 6.21E-54 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS14615 ea4e9dd6b49df931a7dc34056cf0f818 429 SUPERFAMILY SSF51905 360 417 6.21E-54 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS14615 ea4e9dd6b49df931a7dc34056cf0f818 429 SUPERFAMILY SSF51905 107 270 6.21E-54 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS11305 ae1d9c104c501c3f052d0737d2284b9e 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-7 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS11305 ae1d9c104c501c3f052d0737d2284b9e 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-7 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS11305 ae1d9c104c501c3f052d0737d2284b9e 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-7 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS11305 ae1d9c104c501c3f052d0737d2284b9e 313 SUPERFAMILY SSF46785 1 111 1.59E-23 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS11305 ae1d9c104c501c3f052d0737d2284b9e 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.4E-21 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS11305 ae1d9c104c501c3f052d0737d2284b9e 313 Gene3D G3DSA:3.40.190.10 176 263 3.2E-32 T 05-07-2017 AC028_RS11305 ae1d9c104c501c3f052d0737d2284b9e 313 Gene3D G3DSA:1.10.10.10 1 85 8.4E-29 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS11305 ae1d9c104c501c3f052d0737d2284b9e 313 SUPERFAMILY SSF53850 88 295 2.17E-46 T 05-07-2017 AC028_RS11305 ae1d9c104c501c3f052d0737d2284b9e 313 Gene3D G3DSA:3.40.190.10 89 175 3.5E-25 T 05-07-2017 AC028_RS11305 ae1d9c104c501c3f052d0737d2284b9e 313 Pfam PF03466 LysR substrate binding domain 87 292 4.0E-50 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS06425 f77b44059799c2ad8ffa865f16b71ba7 67 Pfam PF04325 Protein of unknown function (DUF465) 14 58 3.0E-13 T 05-07-2017 IPR007420 Protein of unknown function DUF465 AC028_RS19925 749e4dd7a72d9267e2e05290b974a8cb 561 SMART SM00382 368 553 2.9E-13 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS19925 749e4dd7a72d9267e2e05290b974a8cb 561 Gene3D G3DSA:1.20.1560.10 8 325 2.6E-24 T 05-07-2017 AC028_RS19925 749e4dd7a72d9267e2e05290b974a8cb 561 Pfam PF00005 ABC transporter 359 506 9.6E-30 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS19925 749e4dd7a72d9267e2e05290b974a8cb 561 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS19925 749e4dd7a72d9267e2e05290b974a8cb 561 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 8 536 7.1E-121 T 05-07-2017 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 AC028_RS19925 749e4dd7a72d9267e2e05290b974a8cb 561 Gene3D G3DSA:3.40.50.300 341 554 4.8E-52 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19925 749e4dd7a72d9267e2e05290b974a8cb 561 SUPERFAMILY SSF90123 7 329 4.32E-31 T 05-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AC028_RS19925 749e4dd7a72d9267e2e05290b974a8cb 561 Pfam PF00664 ABC transporter transmembrane region 65 230 3.1E-6 T 05-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AC028_RS19925 749e4dd7a72d9267e2e05290b974a8cb 561 SUPERFAMILY SSF52540 335 553 2.33E-55 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS15240 b161739ce0e3c4e0f5409e4bd7a6f66a 210 SUPERFAMILY SSF100950 3 208 5.44E-74 T 05-07-2017 AC028_RS15240 b161739ce0e3c4e0f5409e4bd7a6f66a 210 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 208 1.8E-100 T 05-07-2017 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 AC028_RS15240 b161739ce0e3c4e0f5409e4bd7a6f66a 210 Pfam PF01144 Coenzyme A transferase 7 196 1.9E-43 T 05-07-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 AC028_RS15240 b161739ce0e3c4e0f5409e4bd7a6f66a 210 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 05-07-2017 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 AC028_RS15240 b161739ce0e3c4e0f5409e4bd7a6f66a 210 Gene3D G3DSA:3.40.810.20 3 209 2.6E-94 T 05-07-2017 AC028_RS15240 b161739ce0e3c4e0f5409e4bd7a6f66a 210 SMART SM00882 6 202 1.2E-78 T 05-07-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 AC028_RS00850 fa088f35ee5e5266e81cfc4b975c61c8 189 Gene3D G3DSA:2.40.128.110 36 187 5.4E-32 T 05-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AC028_RS00850 fa088f35ee5e5266e81cfc4b975c61c8 189 Pfam PF04264 YceI-like domain 47 184 2.9E-25 T 05-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AC028_RS00850 fa088f35ee5e5266e81cfc4b975c61c8 189 SUPERFAMILY SSF101874 31 187 1.22E-35 T 05-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AC028_RS00850 fa088f35ee5e5266e81cfc4b975c61c8 189 SMART SM00867 29 187 2.9E-40 T 05-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AC028_RS21460 2b15e1ec18e117e25e563bef01860727 461 Pfam PF14793 Domain of unknown function (DUF4478) 17 122 1.8E-39 T 05-07-2017 IPR027820 Domain of unknown function DUF4478 AC028_RS21460 2b15e1ec18e117e25e563bef01860727 461 Pfam PF03641 Possible lysine decarboxylase 198 337 6.8E-28 T 05-07-2017 IPR031100 LOG family AC028_RS21460 2b15e1ec18e117e25e563bef01860727 461 SUPERFAMILY SSF102405 132 337 1.83E-39 T 05-07-2017 AC028_RS21460 2b15e1ec18e117e25e563bef01860727 461 Pfam PF11892 Domain of unknown function (DUF3412) 342 460 8.2E-52 T 05-07-2017 IPR021826 Protein of unknown function DUF3412 AC028_RS21460 2b15e1ec18e117e25e563bef01860727 461 Gene3D G3DSA:3.30.1850.10 14 125 1.6E-42 T 05-07-2017 IPR027820 Domain of unknown function DUF4478 AC028_RS21460 2b15e1ec18e117e25e563bef01860727 461 Gene3D G3DSA:3.40.50.450 135 459 9.7E-110 T 05-07-2017 AC028_RS10210 85fe3c5c25f6a1b39ba63b0a6f6c422d 154 PRINTS PR00813 Bacterial general secretion pathway protein G signature 21 46 6.2E-18 T 05-07-2017 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AC028_RS10210 85fe3c5c25f6a1b39ba63b0a6f6c422d 154 PRINTS PR00813 Bacterial general secretion pathway protein G signature 57 75 6.2E-18 T 05-07-2017 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AC028_RS10210 85fe3c5c25f6a1b39ba63b0a6f6c422d 154 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 42 6.2E-8 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS10210 85fe3c5c25f6a1b39ba63b0a6f6c422d 154 SUPERFAMILY SSF54523 48 153 1.94E-35 T 05-07-2017 AC028_RS10210 85fe3c5c25f6a1b39ba63b0a6f6c422d 154 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 20 40 - T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS10210 85fe3c5c25f6a1b39ba63b0a6f6c422d 154 Pfam PF08334 Type II secretion system (T2SS), protein G 44 153 1.0E-40 T 05-07-2017 IPR013545 Type II secretion system protein G AC028_RS10210 85fe3c5c25f6a1b39ba63b0a6f6c422d 154 Gene3D G3DSA:3.30.700.10 22 86 2.2E-8 T 05-07-2017 AC028_RS10210 85fe3c5c25f6a1b39ba63b0a6f6c422d 154 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 17 41 7.6E-9 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS10210 85fe3c5c25f6a1b39ba63b0a6f6c422d 154 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 20 153 3.5E-55 T 05-07-2017 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 AC028_RS00050 e290fdedbce7be0307855782f2d66ccf 296 Pfam PF05726 Pirin C-terminal cupin domain 174 272 3.1E-26 T 05-07-2017 IPR008778 Pirin, C-terminal domain AC028_RS00050 e290fdedbce7be0307855782f2d66ccf 296 SUPERFAMILY SSF51182 3 284 2.23E-80 T 05-07-2017 IPR011051 RmlC-like cupin domain AC028_RS00050 e290fdedbce7be0307855782f2d66ccf 296 Gene3D G3DSA:2.60.120.10 6 244 6.5E-65 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS00050 e290fdedbce7be0307855782f2d66ccf 296 Pfam PF02678 Pirin 16 120 1.6E-34 T 05-07-2017 IPR003829 Pirin, N-terminal domain AC028_RS00050 e290fdedbce7be0307855782f2d66ccf 296 PIRSF PIRSF006232 1 280 6.7E-90 T 05-07-2017 IPR012093 Pirin AC028_RS16270 eb35de7ac30b04f7d983613a610a60a0 942 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 11 49 1.2E-15 T 05-07-2017 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AC028_RS16270 eb35de7ac30b04f7d983613a610a60a0 942 Gene3D G3DSA:3.40.50.970 157 518 1.4E-72 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS16270 eb35de7ac30b04f7d983613a610a60a0 942 Pfam PF02779 Transketolase, pyrimidine binding domain 595 788 1.7E-62 T 05-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain AC028_RS16270 eb35de7ac30b04f7d983613a610a60a0 942 Pfam PF00676 Dehydrogenase E1 component 209 516 4.6E-53 T 05-07-2017 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 AC028_RS16270 eb35de7ac30b04f7d983613a610a60a0 942 Gene3D G3DSA:3.40.50.970 596 791 4.6E-24 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS16270 eb35de7ac30b04f7d983613a610a60a0 942 SUPERFAMILY SSF52518 577 794 1.43E-52 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS16270 eb35de7ac30b04f7d983613a610a60a0 942 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 932 0.0 T 05-07-2017 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AC028_RS16270 eb35de7ac30b04f7d983613a610a60a0 942 PIRSF PIRSF000157 2 934 0.0 T 05-07-2017 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AC028_RS16270 eb35de7ac30b04f7d983613a610a60a0 942 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 932 1.4E-51 T 05-07-2017 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AC028_RS16270 eb35de7ac30b04f7d983613a610a60a0 942 SUPERFAMILY SSF52518 117 547 1.06E-85 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS16270 eb35de7ac30b04f7d983613a610a60a0 942 SMART SM00861 594 787 9.2E-53 T 05-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain AC028_RS07465 849ce5b71337c67396d66be1c3b5530f 460 Gene3D G3DSA:1.20.1250.20 28 221 7.9E-16 T 05-07-2017 AC028_RS07465 849ce5b71337c67396d66be1c3b5530f 460 Gene3D G3DSA:1.20.1250.20 236 437 6.8E-13 T 05-07-2017 AC028_RS07465 849ce5b71337c67396d66be1c3b5530f 460 SUPERFAMILY SSF103473 15 434 6.54E-36 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS07465 849ce5b71337c67396d66be1c3b5530f 460 Pfam PF13347 MFS/sugar transport protein 21 439 4.4E-98 T 05-07-2017 AC028_RS07465 849ce5b71337c67396d66be1c3b5530f 460 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 70 95 - T 05-07-2017 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 AC028_RS07465 849ce5b71337c67396d66be1c3b5530f 460 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 19 452 5.0E-119 T 05-07-2017 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 AC028_RS22040 573f6dd63372bf798f8453934a7521ce 214 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 6 167 23.769 T 05-07-2017 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AC028_RS22040 573f6dd63372bf798f8453934a7521ce 214 Gene3D G3DSA:3.30.160.150 21 173 1.2E-40 T 05-07-2017 AC028_RS22040 573f6dd63372bf798f8453934a7521ce 214 Pfam PF04390 Lipopolysaccharide-assembly 12 162 1.2E-13 T 05-07-2017 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AC028_RS12580 90b4a1f38a022e2cc0a5aaba73b6705b 439 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 34 372 4.0E-72 T 05-07-2017 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 AC028_RS12580 90b4a1f38a022e2cc0a5aaba73b6705b 439 Pfam PF17189 Glycosyl hydrolase family 30 beta sandwich domain 375 435 2.2E-13 T 05-07-2017 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 AC028_RS12580 90b4a1f38a022e2cc0a5aaba73b6705b 439 Gene3D G3DSA:2.60.40.1180 369 428 6.0E-19 T 05-07-2017 IPR013780 Glycosyl hydrolase, all-beta AC028_RS12580 90b4a1f38a022e2cc0a5aaba73b6705b 439 PRINTS PR00843 Glycosyl hydrolase family 30 signature 23 43 3.3E-16 T 05-07-2017 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 AC028_RS12580 90b4a1f38a022e2cc0a5aaba73b6705b 439 PRINTS PR00843 Glycosyl hydrolase family 30 signature 153 170 3.3E-16 T 05-07-2017 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 AC028_RS12580 90b4a1f38a022e2cc0a5aaba73b6705b 439 PRINTS PR00843 Glycosyl hydrolase family 30 signature 59 85 3.3E-16 T 05-07-2017 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 AC028_RS12580 90b4a1f38a022e2cc0a5aaba73b6705b 439 PRINTS PR00843 Glycosyl hydrolase family 30 signature 222 244 3.3E-16 T 05-07-2017 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 Reactome: R-HSA-1660662|Reactome: R-HSA-390471 AC028_RS12580 90b4a1f38a022e2cc0a5aaba73b6705b 439 SUPERFAMILY SSF51011 370 436 5.47E-5 T 05-07-2017 AC028_RS12580 90b4a1f38a022e2cc0a5aaba73b6705b 439 SUPERFAMILY SSF51445 34 376 1.6E-79 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS12580 90b4a1f38a022e2cc0a5aaba73b6705b 439 Gene3D G3DSA:3.20.20.80 16 368 9.2E-134 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS10820 316cbedef8ad5eec0b34830848488a90 923 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 46 923 1.4E-204 T 05-07-2017 IPR010104 Bacterial TonB-dependent receptor AC028_RS10820 316cbedef8ad5eec0b34830848488a90 923 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 179 4.4E-19 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS10820 316cbedef8ad5eec0b34830848488a90 923 SUPERFAMILY SSF56935 35 252 3.92E-75 T 05-07-2017 AC028_RS10820 316cbedef8ad5eec0b34830848488a90 923 SUPERFAMILY SSF56935 298 510 3.92E-75 T 05-07-2017 AC028_RS10820 316cbedef8ad5eec0b34830848488a90 923 SUPERFAMILY SSF56935 557 907 3.92E-75 T 05-07-2017 AC028_RS10820 316cbedef8ad5eec0b34830848488a90 923 Gene3D G3DSA:2.170.130.10 46 179 9.2E-19 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS10820 316cbedef8ad5eec0b34830848488a90 923 Gene3D G3DSA:2.40.170.20 294 406 6.4E-66 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS10820 316cbedef8ad5eec0b34830848488a90 923 Gene3D G3DSA:2.40.170.20 580 923 6.4E-66 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS10820 316cbedef8ad5eec0b34830848488a90 923 Gene3D G3DSA:2.40.170.20 452 532 6.4E-66 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS10820 316cbedef8ad5eec0b34830848488a90 923 Gene3D G3DSA:2.40.170.20 180 248 6.4E-66 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS10820 316cbedef8ad5eec0b34830848488a90 923 Pfam PF00593 TonB dependent receptor 645 897 3.8E-27 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS00910 fba8d30a6406ede39cc0be956621c5dc 142 Gene3D G3DSA:3.10.580.10 10 127 3.5E-31 T 05-07-2017 AC028_RS00910 fba8d30a6406ede39cc0be956621c5dc 142 Pfam PF00571 CBS domain 13 58 9.8E-8 T 05-07-2017 IPR000644 CBS domain AC028_RS00910 fba8d30a6406ede39cc0be956621c5dc 142 Pfam PF00571 CBS domain 72 125 7.1E-14 T 05-07-2017 IPR000644 CBS domain AC028_RS00910 fba8d30a6406ede39cc0be956621c5dc 142 SUPERFAMILY SSF54631 3 140 1.1E-32 T 05-07-2017 AC028_RS00910 fba8d30a6406ede39cc0be956621c5dc 142 SMART SM00116 79 126 2.7E-13 T 05-07-2017 IPR000644 CBS domain AC028_RS00910 fba8d30a6406ede39cc0be956621c5dc 142 SMART SM00116 14 61 8.4E-5 T 05-07-2017 IPR000644 CBS domain AC028_RS21170 f866f4618051ca7924cda9936fa296cc 597 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 272 3.4E-15 T 05-07-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AC028_RS21170 f866f4618051ca7924cda9936fa296cc 597 SUPERFAMILY SSF56645 38 280 2.88E-52 T 05-07-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AC028_RS21170 f866f4618051ca7924cda9936fa296cc 597 Gene3D G3DSA:1.10.540.10 39 161 7.3E-13 T 05-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AC028_RS21170 f866f4618051ca7924cda9936fa296cc 597 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 1.2E-7 T 05-07-2017 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AC028_RS21170 f866f4618051ca7924cda9936fa296cc 597 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 284 452 2.4E-23 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS21170 f866f4618051ca7924cda9936fa296cc 597 Gene3D G3DSA:1.20.140.10 269 457 3.0E-50 T 05-07-2017 AC028_RS21170 f866f4618051ca7924cda9936fa296cc 597 Gene3D G3DSA:2.40.110.10 162 268 5.5E-25 T 05-07-2017 AC028_RS21170 f866f4618051ca7924cda9936fa296cc 597 SUPERFAMILY SSF47203 288 459 4.03E-47 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS21170 f866f4618051ca7924cda9936fa296cc 597 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 158 1.7E-5 T 05-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AC028_RS21170 f866f4618051ca7924cda9936fa296cc 597 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 590 6.5E-29 T 05-07-2017 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AC028_RS11170 e9eea0c3cb8df04c299c25c16480b2a3 274 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 46 53 - T 05-07-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AC028_RS11170 e9eea0c3cb8df04c299c25c16480b2a3 274 Gene3D G3DSA:3.40.605.10 2 59 1.1E-20 T 05-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AC028_RS11170 e9eea0c3cb8df04c299c25c16480b2a3 274 SUPERFAMILY SSF53720 3 272 1.44E-85 T 05-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AC028_RS11170 e9eea0c3cb8df04c299c25c16480b2a3 274 Gene3D G3DSA:3.40.309.10 60 237 5.1E-58 T 05-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AC028_RS11170 e9eea0c3cb8df04c299c25c16480b2a3 274 Pfam PF00171 Aldehyde dehydrogenase family 4 270 3.8E-92 T 05-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AC028_RS13240 2835087ba11334b50e2b34e4aaa6f0a6 252 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 229 3.3E-82 T 05-07-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AC028_RS13240 2835087ba11334b50e2b34e4aaa6f0a6 252 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 223 5.8E-56 T 05-07-2017 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AC028_RS13240 2835087ba11334b50e2b34e4aaa6f0a6 252 PIRSF PIRSF000386 1 249 4.7E-88 T 05-07-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AC028_RS13240 2835087ba11334b50e2b34e4aaa6f0a6 252 Gene3D G3DSA:3.40.1280.10 2 160 1.8E-60 T 05-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AC028_RS13240 2835087ba11334b50e2b34e4aaa6f0a6 252 Gene3D G3DSA:1.10.1270.20 162 246 9.5E-30 T 05-07-2017 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AC028_RS13240 2835087ba11334b50e2b34e4aaa6f0a6 252 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 252 103.254 T 05-07-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AC028_RS13240 2835087ba11334b50e2b34e4aaa6f0a6 252 SUPERFAMILY SSF75217 2 246 1.24E-91 T 05-07-2017 IPR029028 Alpha/beta knot methyltransferases AC028_RS22140 af9a328a3e7119a524e349f20fbe294b 610 SUPERFAMILY SSF90123 21 342 1.44E-51 T 05-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AC028_RS22140 af9a328a3e7119a524e349f20fbe294b 610 SUPERFAMILY SSF52540 351 601 2.76E-84 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS22140 af9a328a3e7119a524e349f20fbe294b 610 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS22140 af9a328a3e7119a524e349f20fbe294b 610 Pfam PF00664 ABC transporter transmembrane region 41 303 1.9E-15 T 05-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AC028_RS22140 af9a328a3e7119a524e349f20fbe294b 610 Gene3D G3DSA:1.20.1560.10 28 333 4.9E-41 T 05-07-2017 AC028_RS22140 af9a328a3e7119a524e349f20fbe294b 610 Pfam PF00005 ABC transporter 379 531 4.3E-34 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS22140 af9a328a3e7119a524e349f20fbe294b 610 SMART SM00382 386 577 1.2E-20 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS22140 af9a328a3e7119a524e349f20fbe294b 610 Gene3D G3DSA:3.40.50.300 361 596 1.6E-75 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11260 673fbc5a9c09276d54710ebc16c9e512 154 SUPERFAMILY SSF52172 9 142 2.42E-33 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS11260 673fbc5a9c09276d54710ebc16c9e512 154 SMART SM00448 9 124 3.6E-30 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS11260 673fbc5a9c09276d54710ebc16c9e512 154 Gene3D G3DSA:3.40.50.2300 10 129 7.1E-31 T 05-07-2017 AC028_RS11260 673fbc5a9c09276d54710ebc16c9e512 154 Pfam PF00072 Response regulator receiver domain 11 118 5.5E-27 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS12210 8f0c1665377995ecd1da496602658ca3 106 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 3 95 21.813 T 05-07-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family AC028_RS12210 8f0c1665377995ecd1da496602658ca3 106 PIRSF PIRSF004555 1 106 2.1E-35 T 05-07-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family AC028_RS12210 8f0c1665377995ecd1da496602658ca3 106 Gene3D G3DSA:3.30.1310.10 1 106 7.4E-44 T 05-07-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family AC028_RS12210 8f0c1665377995ecd1da496602658ca3 106 Pfam PF02575 YbaB/EbfC DNA-binding family 9 96 4.1E-32 T 05-07-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family AC028_RS12210 8f0c1665377995ecd1da496602658ca3 106 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 102 6.3E-32 T 05-07-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family AC028_RS12210 8f0c1665377995ecd1da496602658ca3 106 SUPERFAMILY SSF82607 9 100 3.27E-31 T 05-07-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family AC028_RS11025 36228394bd0097707d8a277116ab9fe1 187 TIGRFAM TIGR03566 FMN_reduc_MsuE: FMN reductase 6 177 1.8E-78 T 05-07-2017 IPR019912 FMN reductase, MsuE-like KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 AC028_RS11025 36228394bd0097707d8a277116ab9fe1 187 Gene3D G3DSA:3.40.50.360 2 176 5.3E-30 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS11025 36228394bd0097707d8a277116ab9fe1 187 SUPERFAMILY SSF52218 1 181 1.15E-32 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS11025 36228394bd0097707d8a277116ab9fe1 187 Pfam PF03358 NADPH-dependent FMN reductase 6 148 2.3E-29 T 05-07-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AC028_RS13740 774c84f69f88f3d45f15b0628208830f 248 SUPERFAMILY SSF55166 48 246 3.73E-61 T 05-07-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 AC028_RS13740 774c84f69f88f3d45f15b0628208830f 248 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 49 246 31.003 T 05-07-2017 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 AC028_RS13740 774c84f69f88f3d45f15b0628208830f 248 Pfam PF01427 D-ala-D-ala dipeptidase 47 237 4.2E-41 T 05-07-2017 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 AC028_RS13740 774c84f69f88f3d45f15b0628208830f 248 PIRSF PIRSF026671 22 248 1.6E-72 T 05-07-2017 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 AC028_RS13740 774c84f69f88f3d45f15b0628208830f 248 Gene3D G3DSA:3.30.1380.10 47 247 2.4E-70 T 05-07-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 AC028_RS21700 c77bfe001c95907a5f7d1649de09dbc6 405 Gene3D G3DSA:3.40.50.1100 109 187 1.6E-20 T 05-07-2017 AC028_RS21700 c77bfe001c95907a5f7d1649de09dbc6 405 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 17 399 1.1E-185 T 05-07-2017 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AC028_RS21700 c77bfe001c95907a5f7d1649de09dbc6 405 PIRSF PIRSF001413 4 404 1.0E-154 T 05-07-2017 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AC028_RS21700 c77bfe001c95907a5f7d1649de09dbc6 405 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 12 401 50.696 T 05-07-2017 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AC028_RS21700 c77bfe001c95907a5f7d1649de09dbc6 405 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 91 105 - T 05-07-2017 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AC028_RS21700 c77bfe001c95907a5f7d1649de09dbc6 405 SUPERFAMILY SSF53686 13 398 3.67E-143 T 05-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AC028_RS21700 c77bfe001c95907a5f7d1649de09dbc6 405 Gene3D G3DSA:3.40.50.1100 188 399 8.0E-93 T 05-07-2017 AC028_RS21700 c77bfe001c95907a5f7d1649de09dbc6 405 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 64 388 7.6E-47 T 05-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AC028_RS12365 b4fc10be90b119eb16207ba43d3fdcca 399 Pfam PF04303 PrpF protein 6 392 9.4E-175 T 05-07-2017 IPR007400 PrpF protein AC028_RS12365 b4fc10be90b119eb16207ba43d3fdcca 399 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 5 395 1.0E-235 T 05-07-2017 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 AC028_RS12365 b4fc10be90b119eb16207ba43d3fdcca 399 SUPERFAMILY SSF54506 190 393 1.83E-75 T 05-07-2017 AC028_RS12365 b4fc10be90b119eb16207ba43d3fdcca 399 Gene3D G3DSA:3.10.310.10 197 375 1.1E-78 T 05-07-2017 AC028_RS12365 b4fc10be90b119eb16207ba43d3fdcca 399 SUPERFAMILY SSF54506 3 182 3.37E-71 T 05-07-2017 AC028_RS12365 b4fc10be90b119eb16207ba43d3fdcca 399 Gene3D G3DSA:3.10.310.10 2 196 1.8E-90 T 05-07-2017 AC028_RS19635 e874af0d822d33d722a3fed2ec2a6bb8 700 Gene3D G3DSA:3.40.50.300 374 496 5.0E-8 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19635 e874af0d822d33d722a3fed2ec2a6bb8 700 SUPERFAMILY SSF52540 160 307 3.96E-26 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19635 e874af0d822d33d722a3fed2ec2a6bb8 700 SUPERFAMILY SSF52540 347 473 3.96E-26 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19635 e874af0d822d33d722a3fed2ec2a6bb8 700 Pfam PF04851 Type III restriction enzyme, res subunit 136 305 1.5E-20 T 05-07-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AC028_RS19635 e874af0d822d33d722a3fed2ec2a6bb8 700 Gene3D G3DSA:3.40.50.300 122 310 2.0E-21 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19635 e874af0d822d33d722a3fed2ec2a6bb8 700 SMART SM00487 132 342 1.9E-12 T 05-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_RS14715 e09560a7188638ec2ff72316996ec3f6 335 Gene3D G3DSA:3.40.50.300 1 236 7.0E-87 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS14715 e09560a7188638ec2ff72316996ec3f6 335 SUPERFAMILY SSF52540 1 240 2.52E-83 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS14715 e09560a7188638ec2ff72316996ec3f6 335 SMART SM00930 260 333 5.0E-25 T 05-07-2017 IPR018449 NIL domain AC028_RS14715 e09560a7188638ec2ff72316996ec3f6 335 Pfam PF09383 NIL domain 262 331 5.1E-19 T 05-07-2017 IPR018449 NIL domain AC028_RS14715 e09560a7188638ec2ff72316996ec3f6 335 Gene3D G3DSA:3.30.70.260 237 334 3.3E-25 T 05-07-2017 AC028_RS14715 e09560a7188638ec2ff72316996ec3f6 335 SMART SM00382 30 217 3.4E-18 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS14715 e09560a7188638ec2ff72316996ec3f6 335 SUPERFAMILY SSF55021 260 333 9.96E-17 T 05-07-2017 AC028_RS14715 e09560a7188638ec2ff72316996ec3f6 335 Pfam PF00005 ABC transporter 21 169 1.7E-34 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS14715 e09560a7188638ec2ff72316996ec3f6 335 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS20720 407de6a72372c03aba9d63ebe7e4b956 559 Gene3D G3DSA:1.20.1250.20 276 487 8.1E-12 T 05-07-2017 AC028_RS20720 407de6a72372c03aba9d63ebe7e4b956 559 Pfam PF07690 Major Facilitator Superfamily 40 440 7.2E-36 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS20720 407de6a72372c03aba9d63ebe7e4b956 559 Gene3D G3DSA:1.20.1250.20 31 244 1.9E-16 T 05-07-2017 AC028_RS20720 407de6a72372c03aba9d63ebe7e4b956 559 SUPERFAMILY SSF103473 27 488 3.66E-44 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS21670 a9ff78e9c21b1a65b0cf42c482c5c1cc 227 Gene3D G3DSA:2.60.40.420 49 139 3.6E-14 T 05-07-2017 IPR008972 Cupredoxin AC028_RS21670 a9ff78e9c21b1a65b0cf42c482c5c1cc 227 SUPERFAMILY SSF49503 48 139 1.1E-19 T 05-07-2017 IPR008972 Cupredoxin AC028_RS21670 a9ff78e9c21b1a65b0cf42c482c5c1cc 227 SUPERFAMILY SSF49464 121 178 1.96E-6 T 05-07-2017 IPR008969 Carboxypeptidase-like, regulatory domain AC028_RS03225 46fdf7cbf067214491d8ab9fdc6aa977 627 Pfam PF00082 Subtilase family 190 486 2.0E-49 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS03225 46fdf7cbf067214491d8ab9fdc6aa977 627 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 444 454 - T 05-07-2017 IPR023828 Peptidase S8, subtilisin, Ser-active site AC028_RS03225 46fdf7cbf067214491d8ab9fdc6aa977 627 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 195 206 - T 05-07-2017 IPR023827 Peptidase S8, subtilisin, Asp-active site AC028_RS03225 46fdf7cbf067214491d8ab9fdc6aa977 627 Gene3D G3DSA:3.40.50.200 120 512 7.5E-86 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS03225 46fdf7cbf067214491d8ab9fdc6aa977 627 SUPERFAMILY SSF52743 170 226 2.62E-76 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS03225 46fdf7cbf067214491d8ab9fdc6aa977 627 SUPERFAMILY SSF52743 255 511 2.62E-76 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS03225 46fdf7cbf067214491d8ab9fdc6aa977 627 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 547 611 3.5E-13 T 05-07-2017 IPR007280 Peptidase, C-terminal, archaeal/bacterial AC028_RS03225 46fdf7cbf067214491d8ab9fdc6aa977 627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 190 209 1.2E-20 T 05-07-2017 IPR015500 Peptidase S8, subtilisin-related AC028_RS03225 46fdf7cbf067214491d8ab9fdc6aa977 627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 443 459 1.2E-20 T 05-07-2017 IPR015500 Peptidase S8, subtilisin-related AC028_RS03225 46fdf7cbf067214491d8ab9fdc6aa977 627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 258 271 1.2E-20 T 05-07-2017 IPR015500 Peptidase S8, subtilisin-related AC028_RS19590 539611505e25ecaed22fda4dde030ba8 157 SMART SM00342 42 125 8.5E-29 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS19590 539611505e25ecaed22fda4dde030ba8 157 SUPERFAMILY SSF46689 78 128 2.77E-12 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS19590 539611505e25ecaed22fda4dde030ba8 157 SUPERFAMILY SSF46689 26 76 1.12E-13 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS19590 539611505e25ecaed22fda4dde030ba8 157 Gene3D G3DSA:1.10.10.60 81 126 1.1E-14 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS19590 539611505e25ecaed22fda4dde030ba8 157 Pfam PF12833 Helix-turn-helix domain 48 126 2.4E-25 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS19590 539611505e25ecaed22fda4dde030ba8 157 Gene3D G3DSA:1.10.10.60 23 80 1.3E-20 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS07715 a0f59d8b2b64b322660f51277df8129d 472 Gene3D G3DSA:3.30.870.10 109 303 4.2E-40 T 05-07-2017 AC028_RS07715 a0f59d8b2b64b322660f51277df8129d 472 Pfam PF13091 PLD-like domain 130 271 1.4E-19 T 05-07-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 AC028_RS07715 a0f59d8b2b64b322660f51277df8129d 472 Pfam PF13091 PLD-like domain 315 435 1.1E-22 T 05-07-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 AC028_RS07715 a0f59d8b2b64b322660f51277df8129d 472 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 18 469 1.5E-98 T 05-07-2017 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 AC028_RS07715 a0f59d8b2b64b322660f51277df8129d 472 SMART SM00155 214 241 0.0067 T 05-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AC028_RS07715 a0f59d8b2b64b322660f51277df8129d 472 SMART SM00155 385 412 0.18 T 05-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AC028_RS07715 a0f59d8b2b64b322660f51277df8129d 472 Pfam PF13396 Phospholipase_D-nuclease N-terminal 25 57 1.1E-4 T 05-07-2017 IPR027379 Cardiolipin synthase N-terminal AC028_RS07715 a0f59d8b2b64b322660f51277df8129d 472 Gene3D G3DSA:3.30.870.10 306 449 3.1E-34 T 05-07-2017 AC028_RS07715 a0f59d8b2b64b322660f51277df8129d 472 SUPERFAMILY SSF56024 105 301 1.67E-46 T 05-07-2017 AC028_RS07715 a0f59d8b2b64b322660f51277df8129d 472 SUPERFAMILY SSF56024 263 459 9.42E-47 T 05-07-2017 AC028_RS20890 67ad419febc0b4a85607a11203bcd685 235 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 28 101 1.1E-7 T 05-07-2017 IPR007577 Glycosyltransferase, DXD sugar-binding motif AC028_RS20890 67ad419febc0b4a85607a11203bcd685 235 SUPERFAMILY SSF53448 26 191 2.44E-14 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS11600 92af73247937e905ce81ccc6d0eb4e0e 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 121 1.8E-26 T 05-07-2017 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11600 92af73247937e905ce81ccc6d0eb4e0e 121 SUPERFAMILY SSF48300 4 58 2.09E-16 T 05-07-2017 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11600 92af73247937e905ce81ccc6d0eb4e0e 121 SUPERFAMILY SSF54736 51 121 1.62E-23 T 05-07-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AC028_RS11600 92af73247937e905ce81ccc6d0eb4e0e 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 121 6.0E-28 T 05-07-2017 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11600 92af73247937e905ce81ccc6d0eb4e0e 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 48 2.0E-18 T 05-07-2017 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11600 92af73247937e905ce81ccc6d0eb4e0e 121 Gene3D G3DSA:1.20.5.710 2 51 4.6E-22 T 05-07-2017 AC028_RS11600 92af73247937e905ce81ccc6d0eb4e0e 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 23.778 T 05-07-2017 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11600 92af73247937e905ce81ccc6d0eb4e0e 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 4.2E-43 T 05-07-2017 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11600 92af73247937e905ce81ccc6d0eb4e0e 121 Gene3D G3DSA:3.30.1390.10 52 121 3.3E-29 T 05-07-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AC028_RS14975 7b358c0dc8cd27bd08b1b8fa66ebc426 747 Gene3D G3DSA:2.170.130.10 56 174 2.5E-38 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS14975 7b358c0dc8cd27bd08b1b8fa66ebc426 747 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 730 747 - T 05-07-2017 IPR010917 TonB-dependent receptor, conserved site AC028_RS14975 7b358c0dc8cd27bd08b1b8fa66ebc426 747 Gene3D G3DSA:2.40.170.20 175 747 1.7E-111 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS14975 7b358c0dc8cd27bd08b1b8fa66ebc426 747 Pfam PF00593 TonB dependent receptor 467 745 3.0E-38 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS14975 7b358c0dc8cd27bd08b1b8fa66ebc426 747 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 59 747 1.6E-71 T 05-07-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AC028_RS14975 7b358c0dc8cd27bd08b1b8fa66ebc426 747 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 172 4.4E-28 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS14975 7b358c0dc8cd27bd08b1b8fa66ebc426 747 SUPERFAMILY SSF56935 43 747 9.42E-124 T 05-07-2017 AC028_RS17675 2b1c34e49cefe311c4e9c5a92db2f04d 409 SUPERFAMILY SSF55874 273 402 2.36E-19 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS17675 2b1c34e49cefe311c4e9c5a92db2f04d 409 Gene3D G3DSA:1.10.287.130 203 241 4.7E-4 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS17675 2b1c34e49cefe311c4e9c5a92db2f04d 409 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 349 9.1E-6 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS17675 2b1c34e49cefe311c4e9c5a92db2f04d 409 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 382 9.1E-6 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS17675 2b1c34e49cefe311c4e9c5a92db2f04d 409 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 401 9.1E-6 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS17675 2b1c34e49cefe311c4e9c5a92db2f04d 409 SMART SM00387 296 404 7.7E-12 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS17675 2b1c34e49cefe311c4e9c5a92db2f04d 409 Gene3D G3DSA:3.30.565.10 281 404 5.3E-18 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS17675 2b1c34e49cefe311c4e9c5a92db2f04d 409 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 299 403 2.0E-10 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS17675 2b1c34e49cefe311c4e9c5a92db2f04d 409 SUPERFAMILY SSF47384 198 242 1.04E-5 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS01200 e8ee2d80829a8974305eddc3827d74ce 307 SUPERFAMILY SSF101478 7 269 7.45E-64 T 05-07-2017 IPR005502 ADP-ribosylation/Crystallin J1 AC028_RS01200 e8ee2d80829a8974305eddc3827d74ce 307 Pfam PF03747 ADP-ribosylglycohydrolase 12 266 5.9E-59 T 05-07-2017 IPR005502 ADP-ribosylation/Crystallin J1 AC028_RS16110 825f3a6800196374192383689bddb4cf 1113 Gene3D G3DSA:3.30.2080.10 821 969 4.0E-62 T 05-07-2017 AC028_RS16110 825f3a6800196374192383689bddb4cf 1113 SUPERFAMILY SSF48208 454 946 9.69E-16 T 05-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AC028_RS16110 825f3a6800196374192383689bddb4cf 1113 Gene3D G3DSA:1.20.1610.10 648 820 6.3E-50 T 05-07-2017 AC028_RS16110 825f3a6800196374192383689bddb4cf 1113 Gene3D G3DSA:2.70.98.10 217 511 7.0E-76 T 05-07-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 AC028_RS16110 825f3a6800196374192383689bddb4cf 1113 Pfam PF07971 Glycosyl hydrolase family 92 426 960 8.3E-143 T 05-07-2017 IPR012939 Glycosyl hydrolase family 92 AC028_RS16110 825f3a6800196374192383689bddb4cf 1113 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 231 963 2.3E-139 T 05-07-2017 IPR005887 Alpha-1,2-mannosidase, putative AC028_RS16110 825f3a6800196374192383689bddb4cf 1113 Gene3D G3DSA:1.20.1050.60 555 645 4.9E-27 T 05-07-2017 AC028_RS22345 99b1489279746569ac5ed621e8b73ae2 151 Gene3D G3DSA:1.10.20.10 41 102 1.1E-4 T 05-07-2017 IPR009072 Histone-fold GO:0046982 AC028_RS15845 7824e856b488a9f0f7c80352b789baf9 287 SUPERFAMILY SSF82771 34 110 4.05E-6 T 05-07-2017 IPR000305 GIY-YIG nuclease superfamily AC028_RS15845 7824e856b488a9f0f7c80352b789baf9 287 SMART SM00465 33 111 8.0E-5 T 05-07-2017 IPR000305 GIY-YIG nuclease superfamily AC028_RS16210 2fd3cd007bb000437a04b80e3b8138bc 302 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 24 300 1.4E-48 T 05-07-2017 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AC028_RS16210 2fd3cd007bb000437a04b80e3b8138bc 302 SUPERFAMILY SSF53613 25 279 1.71E-54 T 05-07-2017 IPR029056 Ribokinase-like AC028_RS16210 2fd3cd007bb000437a04b80e3b8138bc 302 Pfam PF08543 Phosphomethylpyrimidine kinase 108 276 1.3E-19 T 05-07-2017 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 AC028_RS16210 2fd3cd007bb000437a04b80e3b8138bc 302 Gene3D G3DSA:3.40.1190.20 24 285 5.1E-62 T 05-07-2017 IPR029056 Ribokinase-like AC028_RS17055 8c9bc58442214c0cc544dc67cf4c6be1 252 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 49 231 5.0E-74 T 05-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS17055 8c9bc58442214c0cc544dc67cf4c6be1 252 Pfam PF01578 Cytochrome C assembly protein 46 188 1.7E-28 T 05-07-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AC028_RS17055 8c9bc58442214c0cc544dc67cf4c6be1 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 104 124 2.3E-51 T 05-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS17055 8c9bc58442214c0cc544dc67cf4c6be1 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 49 66 2.3E-51 T 05-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS17055 8c9bc58442214c0cc544dc67cf4c6be1 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 208 232 2.3E-51 T 05-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS17055 8c9bc58442214c0cc544dc67cf4c6be1 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 160 186 2.3E-51 T 05-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS17055 8c9bc58442214c0cc544dc67cf4c6be1 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 66 86 2.3E-51 T 05-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS17055 8c9bc58442214c0cc544dc67cf4c6be1 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 125 145 2.3E-51 T 05-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS13490 55c0467906c31204fb586e14c8578c27 321 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 246 6.0E-60 T 05-07-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AC028_RS13490 55c0467906c31204fb586e14c8578c27 321 Gene3D G3DSA:3.40.50.720 1 196 1.0E-62 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS13490 55c0467906c31204fb586e14c8578c27 321 SUPERFAMILY SSF51735 1 316 1.88E-92 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS13490 55c0467906c31204fb586e14c8578c27 321 Gene3D G3DSA:3.90.25.10 197 315 1.2E-18 T 05-07-2017 AC028_RS13490 55c0467906c31204fb586e14c8578c27 321 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.2E-23 T 05-07-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AC028_RS13490 55c0467906c31204fb586e14c8578c27 321 PRINTS PR01713 Nucleotide sugar epimerase signature 279 296 1.2E-23 T 05-07-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AC028_RS13490 55c0467906c31204fb586e14c8578c27 321 PRINTS PR01713 Nucleotide sugar epimerase signature 214 229 1.2E-23 T 05-07-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AC028_RS13490 55c0467906c31204fb586e14c8578c27 321 PRINTS PR01713 Nucleotide sugar epimerase signature 240 255 1.2E-23 T 05-07-2017 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AC028_RS04345 7e93601764147b74aa74005162e6c12b 227 Pfam PF02223 Thymidylate kinase 14 188 1.3E-39 T 05-07-2017 AC028_RS04345 7e93601764147b74aa74005162e6c12b 227 Hamap MF_00165 Thymidylate kinase [tmk]. 10 200 21.942 T 05-07-2017 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AC028_RS04345 7e93601764147b74aa74005162e6c12b 227 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 9 188 2.5E-40 T 05-07-2017 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AC028_RS04345 7e93601764147b74aa74005162e6c12b 227 SUPERFAMILY SSF52540 9 198 7.12E-38 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS04345 7e93601764147b74aa74005162e6c12b 227 Gene3D G3DSA:3.40.50.300 8 200 1.9E-50 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS04920 ba30a0866338c5956bfcd96a54111a0e 296 PRINTS PR00069 Aldo-keto reductase signature 52 76 6.0E-12 T 05-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AC028_RS04920 ba30a0866338c5956bfcd96a54111a0e 296 PRINTS PR00069 Aldo-keto reductase signature 117 135 6.0E-12 T 05-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AC028_RS04920 ba30a0866338c5956bfcd96a54111a0e 296 PRINTS PR00069 Aldo-keto reductase signature 152 169 6.0E-12 T 05-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AC028_RS04920 ba30a0866338c5956bfcd96a54111a0e 296 PRINTS PR00069 Aldo-keto reductase signature 222 246 6.0E-12 T 05-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AC028_RS04920 ba30a0866338c5956bfcd96a54111a0e 296 Gene3D G3DSA:3.20.20.100 13 290 6.0E-63 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS04920 ba30a0866338c5956bfcd96a54111a0e 296 Pfam PF00248 Aldo/keto reductase family 22 289 2.7E-51 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS04920 ba30a0866338c5956bfcd96a54111a0e 296 SUPERFAMILY SSF51430 12 289 2.62E-65 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS22365 3aab5689cba38036c45ba7c629a469ab 107 Gene3D G3DSA:2.30.30.110 14 105 1.7E-13 T 05-07-2017 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AC028_RS22365 3aab5689cba38036c45ba7c629a469ab 107 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 2 102 2.1E-17 T 05-07-2017 IPR003477 mRNA interferase PemK-like protein GO:0003677 AC028_RS22365 3aab5689cba38036c45ba7c629a469ab 107 SUPERFAMILY SSF50118 2 105 2.62E-24 T 05-07-2017 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AC028_RS00170 477c66b03fb94963c13dee5692b783b0 251 Gene3D G3DSA:3.40.50.1820 12 247 3.4E-43 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS00170 477c66b03fb94963c13dee5692b783b0 251 Pfam PF01738 Dienelactone hydrolase family 31 247 5.1E-37 T 05-07-2017 IPR002925 Dienelactone hydrolase GO:0016787 AC028_RS00170 477c66b03fb94963c13dee5692b783b0 251 SUPERFAMILY SSF53474 26 248 3.82E-37 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS10715 c5d69faeaeecf503397938d0321278bd 585 Pfam PF09286 Pro-kumamolisin, activation domain 40 168 6.3E-11 T 05-07-2017 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 AC028_RS10715 c5d69faeaeecf503397938d0321278bd 585 SMART SM00944 30 170 3.3E-27 T 05-07-2017 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 AC028_RS10715 c5d69faeaeecf503397938d0321278bd 585 SUPERFAMILY SSF54897 28 171 5.27E-24 T 05-07-2017 IPR009020 Proteinase propeptide inhibitor AC028_RS10715 c5d69faeaeecf503397938d0321278bd 585 Gene3D G3DSA:3.40.50.200 210 581 3.4E-62 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS10715 c5d69faeaeecf503397938d0321278bd 585 SUPERFAMILY SSF52743 208 576 2.49E-52 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS10715 c5d69faeaeecf503397938d0321278bd 585 Pfam PF00082 Subtilase family 312 569 7.3E-13 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS10715 c5d69faeaeecf503397938d0321278bd 585 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 499 509 - T 05-07-2017 IPR023828 Peptidase S8, subtilisin, Ser-active site AC028_RS10080 254769c297c00692f9cca8ce3e4c5200 287 Gene3D G3DSA:3.60.10.10 34 283 6.8E-16 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS10080 254769c297c00692f9cca8ce3e4c5200 287 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 37 276 2.6E-21 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS10080 254769c297c00692f9cca8ce3e4c5200 287 SUPERFAMILY SSF56219 33 285 1.09E-42 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS09650 87b6e50707c4c920763f204438da2bb3 624 Gene3D G3DSA:3.30.70.270 466 623 6.3E-46 T 05-07-2017 AC028_RS09650 87b6e50707c4c920763f204438da2bb3 624 SMART SM00267 453 624 2.2E-50 T 05-07-2017 IPR000160 GGDEF domain AC028_RS09650 87b6e50707c4c920763f204438da2bb3 624 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 460 622 1.6E-36 T 05-07-2017 IPR000160 GGDEF domain AC028_RS09650 87b6e50707c4c920763f204438da2bb3 624 SUPERFAMILY SSF55073 469 623 1.8E-40 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS09650 87b6e50707c4c920763f204438da2bb3 624 Pfam PF00990 Diguanylate cyclase, GGDEF domain 464 620 5.4E-37 T 05-07-2017 IPR000160 GGDEF domain AC028_RS22290 519f12911349502d75a33c1c92ffab80 395 Gene3D G3DSA:3.40.50.300 9 270 2.9E-44 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS22290 519f12911349502d75a33c1c92ffab80 395 Pfam PF06414 Zeta toxin 25 217 1.0E-56 T 05-07-2017 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 AC028_RS22290 519f12911349502d75a33c1c92ffab80 395 SUPERFAMILY SSF52540 32 165 4.87E-11 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS22465 f4154f56c474ea2ce690da97b9e65aea 109 Gene3D G3DSA:1.10.260.40 4 71 5.1E-6 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS08415 71c30ba088e211151d6fb77a0e0e67c0 357 Gene3D G3DSA:3.20.20.70 9 351 1.4E-152 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS08415 71c30ba088e211151d6fb77a0e0e67c0 357 SUPERFAMILY SSF51569 7 348 1.15E-133 T 05-07-2017 AC028_RS08415 71c30ba088e211151d6fb77a0e0e67c0 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 1.3E-160 T 05-07-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AC028_RS08415 71c30ba088e211151d6fb77a0e0e67c0 357 Pfam PF00793 DAHP synthetase I family 40 338 2.8E-100 T 05-07-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AC028_RS08415 71c30ba088e211151d6fb77a0e0e67c0 357 PIRSF PIRSF001361 2 352 6.3E-157 T 05-07-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AC028_RS10410 dbf6ac2877543b7c60fae77078774082 276 Pfam PF00756 Putative esterase 21 268 3.4E-67 T 05-07-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 AC028_RS10410 dbf6ac2877543b7c60fae77078774082 276 Gene3D G3DSA:3.40.50.1820 2 275 9.0E-83 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS10410 dbf6ac2877543b7c60fae77078774082 276 SUPERFAMILY SSF53474 1 274 4.63E-91 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS10410 dbf6ac2877543b7c60fae77078774082 276 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 4 274 1.9E-128 T 05-07-2017 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 AC028_RS02495 2b74619c19939b06e1e24c117db1b192 429 Gene3D G3DSA:1.10.230.10 282 374 2.2E-41 T 05-07-2017 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 AC028_RS02495 2b74619c19939b06e1e24c117db1b192 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 423 1.2E-208 T 05-07-2017 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 AC028_RS02495 2b74619c19939b06e1e24c117db1b192 429 Gene3D G3DSA:1.10.580.10 53 281 1.3E-99 T 05-07-2017 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AC028_RS02495 2b74619c19939b06e1e24c117db1b192 429 PRINTS PR00143 Citrate synthase signature 297 317 1.0E-54 T 05-07-2017 IPR002020 Citrate synthase GO:0046912 AC028_RS02495 2b74619c19939b06e1e24c117db1b192 429 PRINTS PR00143 Citrate synthase signature 360 376 1.0E-54 T 05-07-2017 IPR002020 Citrate synthase GO:0046912 AC028_RS02495 2b74619c19939b06e1e24c117db1b192 429 PRINTS PR00143 Citrate synthase signature 380 394 1.0E-54 T 05-07-2017 IPR002020 Citrate synthase GO:0046912 AC028_RS02495 2b74619c19939b06e1e24c117db1b192 429 PRINTS PR00143 Citrate synthase signature 220 235 1.0E-54 T 05-07-2017 IPR002020 Citrate synthase GO:0046912 AC028_RS02495 2b74619c19939b06e1e24c117db1b192 429 PRINTS PR00143 Citrate synthase signature 166 179 1.0E-54 T 05-07-2017 IPR002020 Citrate synthase GO:0046912 AC028_RS02495 2b74619c19939b06e1e24c117db1b192 429 PRINTS PR00143 Citrate synthase signature 242 270 1.0E-54 T 05-07-2017 IPR002020 Citrate synthase GO:0046912 AC028_RS02495 2b74619c19939b06e1e24c117db1b192 429 SUPERFAMILY SSF48256 8 429 5.36E-167 T 05-07-2017 IPR002020 Citrate synthase GO:0046912 AC028_RS02495 2b74619c19939b06e1e24c117db1b192 429 Pfam PF00285 Citrate synthase, C-terminal domain 47 412 2.1E-136 T 05-07-2017 IPR002020 Citrate synthase GO:0046912 AC028_RS02495 2b74619c19939b06e1e24c117db1b192 429 ProSitePatterns PS00480 Citrate synthase signature. 304 316 - T 05-07-2017 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AC028_RS02495 2b74619c19939b06e1e24c117db1b192 429 PIRSF PIRSF001369 38 429 3.8E-163 T 05-07-2017 IPR024176 Citrate synthase, bacterial-type AC028_RS16730 bdb96ca26c908f0c9f5e756caf5a852f 237 SMART SM00448 4 117 6.9E-14 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS16730 bdb96ca26c908f0c9f5e756caf5a852f 237 Gene3D G3DSA:1.10.10.10 125 212 9.1E-26 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS16730 bdb96ca26c908f0c9f5e756caf5a852f 237 Pfam PF00072 Response regulator receiver domain 6 117 1.2E-17 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS16730 bdb96ca26c908f0c9f5e756caf5a852f 237 SMART SM00421 149 206 9.7E-17 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS16730 bdb96ca26c908f0c9f5e756caf5a852f 237 SUPERFAMILY SSF52172 2 133 2.28E-24 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS16730 bdb96ca26c908f0c9f5e756caf5a852f 237 Gene3D G3DSA:3.40.50.2300 1 124 6.2E-26 T 05-07-2017 AC028_RS16730 bdb96ca26c908f0c9f5e756caf5a852f 237 SUPERFAMILY SSF46894 139 211 6.46E-21 T 05-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AC028_RS16730 bdb96ca26c908f0c9f5e756caf5a852f 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 3.3E-12 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS16730 bdb96ca26c908f0c9f5e756caf5a852f 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 3.3E-12 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS16730 bdb96ca26c908f0c9f5e756caf5a852f 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 3.3E-12 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS16730 bdb96ca26c908f0c9f5e756caf5a852f 237 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 1.9E-17 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS21570 b4bf03323cd2d3bdb1de65650756da4e 719 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 9 714 6.9E-235 T 05-07-2017 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21570 b4bf03323cd2d3bdb1de65650756da4e 719 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 90 110 1.5E-15 T 05-07-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AC028_RS21570 b4bf03323cd2d3bdb1de65650756da4e 719 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 517 538 1.5E-15 T 05-07-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AC028_RS21570 b4bf03323cd2d3bdb1de65650756da4e 719 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 437 459 1.5E-15 T 05-07-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AC028_RS21570 b4bf03323cd2d3bdb1de65650756da4e 719 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 279 301 1.5E-15 T 05-07-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AC028_RS21570 b4bf03323cd2d3bdb1de65650756da4e 719 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 64 88 1.5E-15 T 05-07-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AC028_RS21570 b4bf03323cd2d3bdb1de65650756da4e 719 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 70 127 1.1E-24 T 05-07-2017 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21570 b4bf03323cd2d3bdb1de65650756da4e 719 Pfam PF00361 Proton-conducting membrane transporter 139 421 1.4E-86 T 05-07-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21570 b4bf03323cd2d3bdb1de65650756da4e 719 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 438 457 5.0E-65 T 05-07-2017 AC028_RS21570 b4bf03323cd2d3bdb1de65650756da4e 719 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 261 287 5.0E-65 T 05-07-2017 AC028_RS21570 b4bf03323cd2d3bdb1de65650756da4e 719 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 88 113 5.0E-65 T 05-07-2017 AC028_RS21570 b4bf03323cd2d3bdb1de65650756da4e 719 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 116 136 5.0E-65 T 05-07-2017 AC028_RS21570 b4bf03323cd2d3bdb1de65650756da4e 719 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 329 341 5.0E-65 T 05-07-2017 AC028_RS21570 b4bf03323cd2d3bdb1de65650756da4e 719 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 239 260 5.0E-65 T 05-07-2017 AC028_RS21570 b4bf03323cd2d3bdb1de65650756da4e 719 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 163 184 5.0E-65 T 05-07-2017 AC028_RS11490 a4598ef50620291bca8d92519af972c6 172 SMART SM00852 13 157 3.3E-27 T 05-07-2017 IPR001453 MoaB/Mog domain AC028_RS11490 a4598ef50620291bca8d92519af972c6 172 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 6 167 4.1E-82 T 05-07-2017 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 AC028_RS11490 a4598ef50620291bca8d92519af972c6 172 PIRSF PIRSF006443 1 165 2.4E-62 T 05-07-2017 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 AC028_RS11490 a4598ef50620291bca8d92519af972c6 172 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 10 151 1.1E-33 T 05-07-2017 IPR001453 MoaB/Mog domain AC028_RS11490 a4598ef50620291bca8d92519af972c6 172 Pfam PF00994 Probable molybdopterin binding domain 14 154 4.7E-31 T 05-07-2017 IPR001453 MoaB/Mog domain AC028_RS11490 a4598ef50620291bca8d92519af972c6 172 SUPERFAMILY SSF53218 8 165 5.23E-43 T 05-07-2017 IPR001453 MoaB/Mog domain AC028_RS11490 a4598ef50620291bca8d92519af972c6 172 Gene3D G3DSA:3.40.980.10 9 161 2.2E-44 T 05-07-2017 IPR001453 MoaB/Mog domain AC028_RS01525 2b57211115a04f1ea2611836f28eb6aa 166 Pfam PF14317 YcxB-like protein 96 155 6.5E-7 T 05-07-2017 IPR025588 YcxB-like protein AC028_RS14810 245bc96cd67077a2fcd4c500f1ec200c 175 SUPERFAMILY SSF47928 3 103 1.83E-18 T 05-07-2017 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 AC028_RS14810 245bc96cd67077a2fcd4c500f1ec200c 175 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 175 17.912 T 05-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 AC028_RS14810 245bc96cd67077a2fcd4c500f1ec200c 175 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 173 3.3E-44 T 05-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 AC028_RS14810 245bc96cd67077a2fcd4c500f1ec200c 175 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 173 2.6E-33 T 05-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 AC028_RS14810 245bc96cd67077a2fcd4c500f1ec200c 175 PRINTS PR00125 ATP synthase delta subunit signature 133 148 3.6E-21 T 05-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 AC028_RS14810 245bc96cd67077a2fcd4c500f1ec200c 175 PRINTS PR00125 ATP synthase delta subunit signature 7 26 3.6E-21 T 05-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 AC028_RS14810 245bc96cd67077a2fcd4c500f1ec200c 175 PRINTS PR00125 ATP synthase delta subunit signature 72 83 3.6E-21 T 05-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 AC028_RS14810 245bc96cd67077a2fcd4c500f1ec200c 175 PRINTS PR00125 ATP synthase delta subunit signature 83 97 3.6E-21 T 05-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 AC028_RS14810 245bc96cd67077a2fcd4c500f1ec200c 175 PRINTS PR00125 ATP synthase delta subunit signature 148 166 3.6E-21 T 05-07-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 AC028_RS14810 245bc96cd67077a2fcd4c500f1ec200c 175 Gene3D G3DSA:1.10.520.20 3 103 1.4E-21 T 05-07-2017 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 AC028_RS17895 fb5b950e32009dd84266f63e1b2b3e04 618 Pfam PF13387 Domain of unknown function (DUF4105) 234 399 1.4E-27 T 05-07-2017 IPR025178 Domain of unknown function DUF4105 AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 SMART SM00086 213 255 4.5E-4 T 05-07-2017 IPR001610 PAC motif AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 SMART SM00086 335 377 9.2E-6 T 05-07-2017 IPR001610 PAC motif AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 SMART SM00086 91 133 0.8 T 05-07-2017 IPR001610 PAC motif AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 SUPERFAMILY SSF55785 273 378 7.57E-25 T 05-07-2017 IPR000014 PAS domain AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 SUPERFAMILY SSF58104 383 634 8.63E-56 T 05-07-2017 AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 Gene3D G3DSA:1.10.287.950 406 602 2.3E-48 T 05-07-2017 AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 517 546 1.1E-37 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 565 594 1.1E-37 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 488 515 1.1E-37 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 411 440 1.1E-37 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 SUPERFAMILY SSF55785 151 252 6.46E-24 T 05-07-2017 IPR000014 PAS domain AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 Pfam PF08448 PAS fold 30 135 1.6E-11 T 05-07-2017 IPR013656 PAS fold-4 AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 29 136 7.8E-15 T 05-07-2017 IPR000014 PAS domain AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 274 383 1.8E-14 T 05-07-2017 IPR000014 PAS domain AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 254 5.2E-10 T 05-07-2017 IPR000014 PAS domain AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 SMART SM00091 138 208 0.049 T 05-07-2017 IPR000014 PAS domain AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 SMART SM00091 262 330 1.2 T 05-07-2017 IPR000014 PAS domain AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 SMART SM00091 18 85 0.16 T 05-07-2017 IPR000014 PAS domain AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 SUPERFAMILY SSF55785 29 130 6.46E-25 T 05-07-2017 IPR000014 PAS domain AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 Pfam PF08447 PAS fold 286 370 1.4E-13 T 05-07-2017 IPR013655 PAS fold-3 GO:0005515 AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 Pfam PF08447 PAS fold 163 248 2.7E-14 T 05-07-2017 IPR013655 PAS fold-3 GO:0005515 AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 Gene3D G3DSA:3.30.450.20 30 132 6.9E-23 T 05-07-2017 AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 Gene3D G3DSA:3.30.450.20 152 253 4.2E-22 T 05-07-2017 AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 Gene3D G3DSA:3.30.450.20 274 376 5.7E-24 T 05-07-2017 AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 451 634 2.8E-43 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS17405 c7a1c18cf00449ffa0eb2d93ad9448cf 661 SMART SM00283 390 637 2.1E-60 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS13360 3d22652055f77389940d40fb4e95bbf4 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 386 1.5E-49 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS13360 3d22652055f77389940d40fb4e95bbf4 393 SUPERFAMILY SSF56645 12 249 1.02E-82 T 05-07-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AC028_RS13360 3d22652055f77389940d40fb4e95bbf4 393 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 132 144 - T 05-07-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AC028_RS13360 3d22652055f77389940d40fb4e95bbf4 393 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 344 363 - T 05-07-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AC028_RS13360 3d22652055f77389940d40fb4e95bbf4 393 Gene3D G3DSA:1.20.140.10 226 388 6.0E-70 T 05-07-2017 AC028_RS13360 3d22652055f77389940d40fb4e95bbf4 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 224 1.1E-26 T 05-07-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AC028_RS13360 3d22652055f77389940d40fb4e95bbf4 393 Gene3D G3DSA:1.10.540.10 10 126 8.8E-39 T 05-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AC028_RS13360 3d22652055f77389940d40fb4e95bbf4 393 Gene3D G3DSA:2.40.110.10 130 225 3.5E-42 T 05-07-2017 AC028_RS13360 3d22652055f77389940d40fb4e95bbf4 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 126 1.1E-30 T 05-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AC028_RS13360 3d22652055f77389940d40fb4e95bbf4 393 SUPERFAMILY SSF47203 234 388 5.15E-60 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS07440 c30ae8a33d8245a09fa040677ba0fe17 146 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 1 131 4.0E-5 T 05-07-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AC028_RS07440 c30ae8a33d8245a09fa040677ba0fe17 146 Gene3D G3DSA:3.40.50.9100 1 133 1.9E-16 T 05-07-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AC028_RS07440 c30ae8a33d8245a09fa040677ba0fe17 146 SUPERFAMILY SSF52304 1 134 5.36E-19 T 05-07-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AC028_RS06210 d1998e81c3fb990a90fe7c938f37ccbc 499 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 362 382 - T 05-07-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AC028_RS06210 d1998e81c3fb990a90fe7c938f37ccbc 499 PIRSF PIRSF000538 3 498 1.5E-181 T 05-07-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AC028_RS06210 d1998e81c3fb990a90fe7c938f37ccbc 499 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 495 7.1E-225 T 05-07-2017 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AC028_RS06210 d1998e81c3fb990a90fe7c938f37ccbc 499 SUPERFAMILY SSF53067 255 494 1.67E-84 T 05-07-2017 AC028_RS06210 d1998e81c3fb990a90fe7c938f37ccbc 499 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 450 3.4E-62 T 05-07-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AC028_RS06210 d1998e81c3fb990a90fe7c938f37ccbc 499 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 05-07-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AC028_RS06210 d1998e81c3fb990a90fe7c938f37ccbc 499 Gene3D G3DSA:3.30.420.40 254 496 7.1E-102 T 05-07-2017 AC028_RS06210 d1998e81c3fb990a90fe7c938f37ccbc 499 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 252 4.7E-89 T 05-07-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AC028_RS06210 d1998e81c3fb990a90fe7c938f37ccbc 499 Hamap MF_00186 Glycerol kinase [glpK]. 3 497 59.614 T 05-07-2017 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AC028_RS06210 d1998e81c3fb990a90fe7c938f37ccbc 499 Gene3D G3DSA:3.30.420.40 1 253 4.6E-109 T 05-07-2017 AC028_RS06210 d1998e81c3fb990a90fe7c938f37ccbc 499 SUPERFAMILY SSF53067 5 255 8.19E-98 T 05-07-2017 AC028_RS00520 ba8aabafa82503507b2bf398258f3887 282 PIRSF PIRSF005052 1 282 5.9E-110 T 05-07-2017 IPR005337 RapZ-like family GO:0005524 AC028_RS00520 ba8aabafa82503507b2bf398258f3887 282 SUPERFAMILY SSF52540 2 150 1.55E-9 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS00520 ba8aabafa82503507b2bf398258f3887 282 Pfam PF03668 P-loop ATPase protein family 1 279 3.6E-94 T 05-07-2017 IPR005337 RapZ-like family GO:0005524 AC028_RS00520 ba8aabafa82503507b2bf398258f3887 282 Gene3D G3DSA:3.40.50.300 3 150 4.1E-13 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS00520 ba8aabafa82503507b2bf398258f3887 282 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 282 36.891 T 05-07-2017 IPR005337 RapZ-like family GO:0005524 AC028_RS12930 18079e1351e50ca7689eb50f021658e7 419 SUPERFAMILY SSF56219 154 331 1.73E-20 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS12930 18079e1351e50ca7689eb50f021658e7 419 SUPERFAMILY SSF56219 49 121 1.73E-20 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS12930 18079e1351e50ca7689eb50f021658e7 419 SUPERFAMILY SSF56219 358 417 1.73E-20 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS12930 18079e1351e50ca7689eb50f021658e7 419 Gene3D G3DSA:3.60.10.10 158 193 1.6E-5 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS12930 18079e1351e50ca7689eb50f021658e7 419 Gene3D G3DSA:3.60.10.10 253 311 1.6E-5 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS12930 18079e1351e50ca7689eb50f021658e7 419 Gene3D G3DSA:3.60.10.10 43 111 1.6E-5 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS12930 18079e1351e50ca7689eb50f021658e7 419 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 53 410 3.6E-38 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS00100 116d79189718278ca365b22ed6332519 223 Pfam PF12796 Ankyrin repeats (3 copies) 66 144 1.5E-9 T 05-07-2017 IPR020683 Ankyrin repeat-containing domain AC028_RS00100 116d79189718278ca365b22ed6332519 223 SMART SM00248 80 109 0.12 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS00100 116d79189718278ca365b22ed6332519 223 SMART SM00248 47 76 33.0 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS00100 116d79189718278ca365b22ed6332519 223 SMART SM00248 147 177 190.0 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS00100 116d79189718278ca365b22ed6332519 223 SMART SM00248 114 143 10.0 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS00100 116d79189718278ca365b22ed6332519 223 Gene3D G3DSA:1.25.40.20 18 184 3.9E-31 T 05-07-2017 IPR020683 Ankyrin repeat-containing domain AC028_RS00100 116d79189718278ca365b22ed6332519 223 SUPERFAMILY SSF48403 18 195 2.49E-29 T 05-07-2017 IPR020683 Ankyrin repeat-containing domain AC028_RS02200 c517edf6532f9a433c02a2983f915f79 675 Pfam PF00593 TonB dependent receptor 433 671 3.9E-21 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02200 c517edf6532f9a433c02a2983f915f79 675 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 158 1.2E-18 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS02200 c517edf6532f9a433c02a2983f915f79 675 Gene3D G3DSA:2.170.130.10 25 160 1.2E-22 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS02200 c517edf6532f9a433c02a2983f915f79 675 Gene3D G3DSA:2.40.170.20 161 675 3.3E-75 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02200 c517edf6532f9a433c02a2983f915f79 675 SUPERFAMILY SSF56935 27 675 2.11E-95 T 05-07-2017 AC028_RS20355 7cbe83ebddd6f381775c3f62a25ecb45 182 Pfam PF07152 YaeQ protein 1 173 1.1E-71 T 05-07-2017 IPR009822 YaeQ AC028_RS20355 7cbe83ebddd6f381775c3f62a25ecb45 182 SMART SM01322 1 176 8.1E-110 T 05-07-2017 IPR009822 YaeQ AC028_RS20355 7cbe83ebddd6f381775c3f62a25ecb45 182 Gene3D G3DSA:3.10.640.10 1 178 1.0E-75 T 05-07-2017 AC028_RS20355 7cbe83ebddd6f381775c3f62a25ecb45 182 SUPERFAMILY SSF52980 5 178 1.96E-68 T 05-07-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AC028_RS20355 7cbe83ebddd6f381775c3f62a25ecb45 182 PIRSF PIRSF011484 1 180 5.6E-64 T 05-07-2017 IPR009822 YaeQ AC028_RS12685 c91d14d3f2d325436ab2654e3743b176 141 PIRSF PIRSF018297 1 133 1.6E-39 T 05-07-2017 IPR006440 Death on curing protein GO:0016301 AC028_RS12685 c91d14d3f2d325436ab2654e3743b176 141 Pfam PF02661 Fic/DOC family 9 85 2.7E-13 T 05-07-2017 IPR003812 Fido domain AC028_RS12685 c91d14d3f2d325436ab2654e3743b176 141 Gene3D G3DSA:1.10.3290.10 52 78 2.3E-4 T 05-07-2017 IPR003812 Fido domain AC028_RS12685 c91d14d3f2d325436ab2654e3743b176 141 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 51 121 1.4E-13 T 05-07-2017 IPR006440 Death on curing protein GO:0016301 AC028_RS12685 c91d14d3f2d325436ab2654e3743b176 141 SUPERFAMILY SSF140931 33 94 4.97E-7 T 05-07-2017 IPR003812 Fido domain AC028_RS02430 98c03e8afc0c397a07b12877de324222 582 Pfam PF13584 Oxygen tolerance 28 462 6.3E-72 T 05-07-2017 IPR025738 Aerotolerance-related protein BatD AC028_RS21915 7f29eb61b996703b9c746a0e766012c2 224 Pfam PF13847 Methyltransferase domain 39 159 7.2E-15 T 05-07-2017 IPR025714 Methyltransferase domain AC028_RS21915 7f29eb61b996703b9c746a0e766012c2 224 Gene3D G3DSA:3.40.50.150 28 212 4.4E-25 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS21915 7f29eb61b996703b9c746a0e766012c2 224 SUPERFAMILY SSF53335 27 203 2.07E-25 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS13265 1f2cdd09a8031f80a4944828c7114db5 218 Gene3D G3DSA:1.20.1050.10 90 187 2.0E-17 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS13265 1f2cdd09a8031f80a4944828c7114db5 218 Gene3D G3DSA:3.40.30.10 6 89 3.8E-29 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS13265 1f2cdd09a8031f80a4944828c7114db5 218 Pfam PF00043 Glutathione S-transferase, C-terminal domain 131 188 9.1E-5 T 05-07-2017 IPR004046 Glutathione S-transferase, C-terminal AC028_RS13265 1f2cdd09a8031f80a4944828c7114db5 218 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 81 5.0E-15 T 05-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AC028_RS13265 1f2cdd09a8031f80a4944828c7114db5 218 SUPERFAMILY SSF52833 5 85 3.81E-23 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS13265 1f2cdd09a8031f80a4944828c7114db5 218 SUPERFAMILY SSF47616 83 193 1.99E-16 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS14195 c2b49a48f76bb0d64d29341586535715 119 Gene3D G3DSA:3.10.450.40 7 114 4.1E-31 T 05-07-2017 AC028_RS14195 c2b49a48f76bb0d64d29341586535715 119 Pfam PF04965 Gene 25-like lysozyme 14 97 3.0E-13 T 05-07-2017 IPR007048 GpW/Gp25/anti-adapter protein IraD AC028_RS14195 c2b49a48f76bb0d64d29341586535715 119 SUPERFAMILY SSF160719 8 99 4.05E-26 T 05-07-2017 AC028_RS08500 5b326c50e45a04ee29ee0a6dc0c48a1b 384 Gene3D G3DSA:3.90.15.10 127 256 4.8E-38 T 05-07-2017 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 AC028_RS08500 5b326c50e45a04ee29ee0a6dc0c48a1b 384 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 205 221 6.8E-6 T 05-07-2017 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 AC028_RS08500 5b326c50e45a04ee29ee0a6dc0c48a1b 384 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 323 334 6.8E-6 T 05-07-2017 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 AC028_RS08500 5b326c50e45a04ee29ee0a6dc0c48a1b 384 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 270 284 6.8E-6 T 05-07-2017 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 AC028_RS08500 5b326c50e45a04ee29ee0a6dc0c48a1b 384 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 160 179 6.8E-6 T 05-07-2017 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 AC028_RS08500 5b326c50e45a04ee29ee0a6dc0c48a1b 384 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 183 197 6.8E-6 T 05-07-2017 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 AC028_RS08500 5b326c50e45a04ee29ee0a6dc0c48a1b 384 SUPERFAMILY SSF55869 60 120 3.27E-21 T 05-07-2017 AC028_RS08500 5b326c50e45a04ee29ee0a6dc0c48a1b 384 SUPERFAMILY SSF56349 116 343 2.62E-68 T 05-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AC028_RS08500 5b326c50e45a04ee29ee0a6dc0c48a1b 384 Gene3D G3DSA:1.20.120.380 271 359 3.9E-28 T 05-07-2017 IPR027362 DNA topoisomerase I catalytic fragment, domain 2 AC028_RS08500 5b326c50e45a04ee29ee0a6dc0c48a1b 384 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 123 327 1.6E-31 T 05-07-2017 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003918|GO:0006265 AC028_RS16535 ea551e5cd77681e65a901b97b8022b33 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 311 3.0E-14 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS16535 ea551e5cd77681e65a901b97b8022b33 324 SUPERFAMILY SSF161098 33 311 5.76E-34 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS16535 ea551e5cd77681e65a901b97b8022b33 324 Gene3D G3DSA:1.10.3720.10 25 322 1.1E-37 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS16535 ea551e5cd77681e65a901b97b8022b33 324 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 25 317 4.6E-91 T 05-07-2017 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 AC028_RS17840 0a2b229754f7ac4a3997fb71ea3afa55 358 SUPERFAMILY SSF52129 128 237 9.94E-6 T 05-07-2017 IPR029030 Caspase-like domain AC028_RS17840 0a2b229754f7ac4a3997fb71ea3afa55 358 Pfam PF01650 Peptidase C13 family 74 284 1.7E-49 T 05-07-2017 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 AC028_RS17380 a0d112f334b1f8136202394089688670 162 Gene3D G3DSA:1.10.10.10 18 64 4.0E-19 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS17380 a0d112f334b1f8136202394089688670 162 Gene3D G3DSA:1.10.10.10 111 161 2.6E-19 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS17380 a0d112f334b1f8136202394089688670 162 Pfam PF02631 RecX family 41 156 7.1E-27 T 05-07-2017 IPR003783 Regulatory protein RecX GO:0006282 AC028_RS17380 a0d112f334b1f8136202394089688670 162 Gene3D G3DSA:1.10.10.10 65 109 6.5E-19 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS17380 a0d112f334b1f8136202394089688670 162 Hamap MF_01114 Regulatory protein RecX [recX]. 11 162 14.368 T 05-07-2017 IPR003783 Regulatory protein RecX GO:0006282 AC028_RS15350 662703b521a5812b71791ca1632dda87 120 Gene3D G3DSA:1.10.10.10 10 118 6.7E-28 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS15350 662703b521a5812b71791ca1632dda87 120 SUPERFAMILY SSF46785 20 117 5.35E-24 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS15350 662703b521a5812b71791ca1632dda87 120 Pfam PF03551 Transcriptional regulator PadR-like family 24 98 2.1E-19 T 05-07-2017 IPR005149 Transcription regulator PadR, N-terminal AC028_RS15750 5c54636b5cef6cc4407bac92764ae0cf 476 SUPERFAMILY SSF48024 31 143 7.06E-39 T 05-07-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AC028_RS15750 5c54636b5cef6cc4407bac92764ae0cf 476 Gene3D G3DSA:3.40.50.300 196 468 4.6E-110 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS15750 5c54636b5cef6cc4407bac92764ae0cf 476 SUPERFAMILY SSF52540 209 280 6.56E-55 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS15750 5c54636b5cef6cc4407bac92764ae0cf 476 SUPERFAMILY SSF52540 307 459 6.56E-55 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS15750 5c54636b5cef6cc4407bac92764ae0cf 476 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 33 468 3.1E-178 T 05-07-2017 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AC028_RS15750 5c54636b5cef6cc4407bac92764ae0cf 476 Pfam PF03796 DnaB-like helicase C terminal domain 211 466 1.6E-119 T 05-07-2017 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AC028_RS15750 5c54636b5cef6cc4407bac92764ae0cf 476 Gene3D G3DSA:1.10.860.10 33 135 3.4E-38 T 05-07-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AC028_RS15750 5c54636b5cef6cc4407bac92764ae0cf 476 Pfam PF00772 DnaB-like helicase N terminal domain 33 134 1.9E-36 T 05-07-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AC028_RS09030 47ee480f8a315e2511f9c044f4b6980f 336 Gene3D G3DSA:3.30.540.10 5 194 2.1E-71 T 05-07-2017 AC028_RS09030 47ee480f8a315e2511f9c044f4b6980f 336 SUPERFAMILY SSF56655 4 330 7.33E-112 T 05-07-2017 AC028_RS09030 47ee480f8a315e2511f9c044f4b6980f 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 332 45.534 T 05-07-2017 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AC028_RS09030 47ee480f8a315e2511f9c044f4b6980f 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 192 1.0E-59 T 05-07-2017 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AC028_RS09030 47ee480f8a315e2511f9c044f4b6980f 336 Gene3D G3DSA:3.40.190.80 195 330 8.2E-57 T 05-07-2017 AC028_RS09030 47ee480f8a315e2511f9c044f4b6980f 336 PIRSF PIRSF500210 1 335 2.5E-123 T 05-07-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AC028_RS09030 47ee480f8a315e2511f9c044f4b6980f 336 PIRSF PIRSF000904 1 336 4.4E-122 T 05-07-2017 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AC028_RS09030 47ee480f8a315e2511f9c044f4b6980f 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 28 55 1.2E-67 T 05-07-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AC028_RS09030 47ee480f8a315e2511f9c044f4b6980f 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 178 201 1.2E-67 T 05-07-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AC028_RS09030 47ee480f8a315e2511f9c044f4b6980f 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 306 331 1.2E-67 T 05-07-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AC028_RS09030 47ee480f8a315e2511f9c044f4b6980f 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 204 231 1.2E-67 T 05-07-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AC028_RS09030 47ee480f8a315e2511f9c044f4b6980f 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 147 170 1.2E-67 T 05-07-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AC028_RS09030 47ee480f8a315e2511f9c044f4b6980f 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 65 91 1.2E-67 T 05-07-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AC028_RS20305 0e969a16dd90e5bda67b6c9a43ded9a4 146 SUPERFAMILY SSF53933 54 138 4.54E-32 T 05-07-2017 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 AC028_RS20305 0e969a16dd90e5bda67b6c9a43ded9a4 146 Gene3D G3DSA:3.10.450.30 55 137 9.7E-37 T 05-07-2017 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 AC028_RS20305 0e969a16dd90e5bda67b6c9a43ded9a4 146 Pfam PF00545 ribonuclease 55 135 6.3E-27 T 05-07-2017 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 AC028_RS17705 c82a4f0030ed21f286977989c00c1940 303 SUPERFAMILY SSF103481 185 282 3.4E-16 T 05-07-2017 AC028_RS17705 c82a4f0030ed21f286977989c00c1940 303 SUPERFAMILY SSF103481 44 145 1.57E-17 T 05-07-2017 AC028_RS17705 c82a4f0030ed21f286977989c00c1940 303 Pfam PF00892 EamA-like transporter family 150 278 1.2E-17 T 05-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AC028_RS17705 c82a4f0030ed21f286977989c00c1940 303 Pfam PF00892 EamA-like transporter family 11 141 1.0E-17 T 05-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AC028_RS02845 7c90b021e8b6710bb786d0cb7a055e20 512 SUPERFAMILY SSF58104 79 338 4.71E-44 T 05-07-2017 AC028_RS02845 7c90b021e8b6710bb786d0cb7a055e20 512 Gene3D G3DSA:1.10.287.950 105 299 1.3E-36 T 05-07-2017 AC028_RS02845 7c90b021e8b6710bb786d0cb7a055e20 512 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 151 331 3.2E-30 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS02845 7c90b021e8b6710bb786d0cb7a055e20 512 SMART SM00283 88 335 4.5E-29 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS02845 7c90b021e8b6710bb786d0cb7a055e20 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 215 244 2.2E-24 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS02845 7c90b021e8b6710bb786d0cb7a055e20 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 186 213 2.2E-24 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS02845 7c90b021e8b6710bb786d0cb7a055e20 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 109 138 2.2E-24 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS10010 52847002a52fdac93ecf1f98b5d9c521 686 Gene3D G3DSA:3.90.1310.10 130 247 1.1E-32 T 05-07-2017 AC028_RS10010 52847002a52fdac93ecf1f98b5d9c521 686 SUPERFAMILY SSF56519 57 248 1.1E-46 T 05-07-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AC028_RS10010 52847002a52fdac93ecf1f98b5d9c521 686 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 233 9.8E-41 T 05-07-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AC028_RS10010 52847002a52fdac93ecf1f98b5d9c521 686 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 607 3.4E-206 T 05-07-2017 IPR017790 Penicillin-binding protein 2 GO:0016020 AC028_RS10010 52847002a52fdac93ecf1f98b5d9c521 686 Pfam PF00905 Penicillin binding protein transpeptidase domain 266 604 1.2E-62 T 05-07-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AC028_RS10010 52847002a52fdac93ecf1f98b5d9c521 686 SUPERFAMILY SSF56601 250 607 8.25E-92 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS10010 52847002a52fdac93ecf1f98b5d9c521 686 Gene3D G3DSA:3.40.710.10 249 608 3.2E-98 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS01605 75f7c61df2682be325985fd9c7f7cb18 398 SUPERFAMILY SSF51419 31 283 4.45E-62 T 05-07-2017 IPR029066 PLP-binding barrel AC028_RS01605 75f7c61df2682be325985fd9c7f7cb18 398 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 287 392 4.0E-10 T 05-07-2017 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AC028_RS01605 75f7c61df2682be325985fd9c7f7cb18 398 Gene3D G3DSA:2.40.37.10 273 397 1.4E-29 T 05-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AC028_RS01605 75f7c61df2682be325985fd9c7f7cb18 398 Gene3D G3DSA:3.20.20.10 34 272 4.4E-59 T 05-07-2017 IPR029066 PLP-binding barrel AC028_RS01605 75f7c61df2682be325985fd9c7f7cb18 398 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 280 2.7E-28 T 05-07-2017 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AC028_RS01605 75f7c61df2682be325985fd9c7f7cb18 398 SUPERFAMILY SSF50621 250 396 5.23E-38 T 05-07-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AC028_RS01605 75f7c61df2682be325985fd9c7f7cb18 398 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 2.9E-10 T 05-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AC028_RS01605 75f7c61df2682be325985fd9c7f7cb18 398 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 54 72 2.9E-10 T 05-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AC028_RS01605 75f7c61df2682be325985fd9c7f7cb18 398 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 186 199 2.9E-10 T 05-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AC028_RS01605 75f7c61df2682be325985fd9c7f7cb18 398 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 74 86 2.9E-10 T 05-07-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AC028_RS18060 6c0b839059b8580ad7982966b9dab920 863 Gene3D G3DSA:3.30.499.10 686 861 2.7E-52 T 05-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS18060 6c0b839059b8580ad7982966b9dab920 863 Gene3D G3DSA:3.20.19.10 162 361 3.1E-86 T 05-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AC028_RS18060 6c0b839059b8580ad7982966b9dab920 863 ProSitePatterns PS00450 Aconitase family signature 1. 705 722 - T 05-07-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AC028_RS18060 6c0b839059b8580ad7982966b9dab920 863 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 855 0.0 T 05-07-2017 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AC028_RS18060 6c0b839059b8580ad7982966b9dab920 863 Gene3D G3DSA:3.30.499.10 405 522 7.0E-64 T 05-07-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS18060 6c0b839059b8580ad7982966b9dab920 863 Pfam PF11791 Aconitate B N-terminal domain 4 156 6.9E-65 T 05-07-2017 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AC028_RS18060 6c0b839059b8580ad7982966b9dab920 863 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.4E-92 T 05-07-2017 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AC028_RS18060 6c0b839059b8580ad7982966b9dab920 863 SUPERFAMILY SSF52016 162 372 1.57E-64 T 05-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AC028_RS18060 6c0b839059b8580ad7982966b9dab920 863 PIRSF PIRSF036687 1 861 0.0 T 05-07-2017 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AC028_RS18060 6c0b839059b8580ad7982966b9dab920 863 SUPERFAMILY SSF74778 1 160 9.42E-67 T 05-07-2017 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AC028_RS18060 6c0b839059b8580ad7982966b9dab920 863 Gene3D G3DSA:3.40.1060.10 523 685 1.4E-85 T 05-07-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS18060 6c0b839059b8580ad7982966b9dab920 863 Pfam PF00330 Aconitase family (aconitate hydratase) 474 817 6.5E-40 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS18060 6c0b839059b8580ad7982966b9dab920 863 SUPERFAMILY SSF53732 380 855 9.42E-145 T 05-07-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AC028_RS05225 2b9aa0d7d6a7bb2078dc26318fa0324b 115 Pfam PF13202 EF hand 94 110 0.02 T 05-07-2017 IPR002048 EF-hand domain GO:0005509 AC028_RS05225 2b9aa0d7d6a7bb2078dc26318fa0324b 115 Pfam PF13202 EF hand 31 49 8.7E-5 T 05-07-2017 IPR002048 EF-hand domain GO:0005509 AC028_RS05225 2b9aa0d7d6a7bb2078dc26318fa0324b 115 SUPERFAMILY SSF47473 29 112 4.0E-13 T 05-07-2017 IPR011992 EF-hand domain pair AC028_RS05225 2b9aa0d7d6a7bb2078dc26318fa0324b 115 Gene3D G3DSA:1.10.238.10 27 54 1.5E-9 T 05-07-2017 IPR011992 EF-hand domain pair AC028_RS05225 2b9aa0d7d6a7bb2078dc26318fa0324b 115 ProSitePatterns PS00018 EF-hand calcium-binding domain. 61 73 - T 05-07-2017 IPR018247 EF-Hand 1, calcium-binding site AC028_RS05225 2b9aa0d7d6a7bb2078dc26318fa0324b 115 Gene3D G3DSA:1.10.238.10 56 111 1.0E-5 T 05-07-2017 IPR011992 EF-hand domain pair AC028_RS05225 2b9aa0d7d6a7bb2078dc26318fa0324b 115 ProSitePatterns PS00018 EF-hand calcium-binding domain. 98 110 - T 05-07-2017 IPR018247 EF-Hand 1, calcium-binding site AC028_RS05225 2b9aa0d7d6a7bb2078dc26318fa0324b 115 ProSitePatterns PS00018 EF-hand calcium-binding domain. 37 49 - T 05-07-2017 IPR018247 EF-Hand 1, calcium-binding site AC028_RS00285 de5f2c7afbd8fb700b2e522f8fe6591c 113 Pfam PF12977 Domain of Unknown Function with PDB structure (DUF3861) 15 105 5.8E-23 T 05-07-2017 IPR024476 Protein of unknown function DUF3861 AC028_RS05980 5df1cae7a9ddd7cbb9bb358a78346b57 225 SUPERFAMILY SSF54593 4 118 1.1E-11 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS05980 5df1cae7a9ddd7cbb9bb358a78346b57 225 Gene3D G3DSA:3.10.180.10 4 116 3.9E-10 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS06050 7ee67937e3dc17b4be5b4b644465062c 479 Pfam PF02321 Outer membrane efflux protein 64 254 3.0E-29 T 05-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AC028_RS06050 7ee67937e3dc17b4be5b4b644465062c 479 Pfam PF02321 Outer membrane efflux protein 279 463 1.3E-29 T 05-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AC028_RS06050 7ee67937e3dc17b4be5b4b644465062c 479 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 465 3.6E-117 T 05-07-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AC028_RS06050 7ee67937e3dc17b4be5b4b644465062c 479 Gene3D G3DSA:1.20.1600.10 51 467 1.7E-114 T 05-07-2017 AC028_RS06050 7ee67937e3dc17b4be5b4b644465062c 479 SUPERFAMILY SSF56954 6 466 3.01E-108 T 05-07-2017 AC028_RS10005 5e5fb9244b8b3119a328bdd03707cec4 161 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 6 151 1.3E-32 T 05-07-2017 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AC028_RS10005 5e5fb9244b8b3119a328bdd03707cec4 161 PIRSF PIRSF018472 1 160 1.5E-50 T 05-07-2017 IPR026034 Cell shape-determining protein MreD, proteobacterial type AC028_RS10005 5e5fb9244b8b3119a328bdd03707cec4 161 Pfam PF04093 rod shape-determining protein MreD 3 152 7.9E-33 T 05-07-2017 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AC028_RS13540 770fe01b3677ccd25a13904aeb9316b1 377 Pfam PF03702 Uncharacterised protein family (UPF0075) 11 376 3.4E-148 T 05-07-2017 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 AC028_RS13540 770fe01b3677ccd25a13904aeb9316b1 377 Gene3D G3DSA:3.30.420.40 11 206 8.0E-69 T 05-07-2017 AC028_RS13540 770fe01b3677ccd25a13904aeb9316b1 377 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 10 377 41.471 T 05-07-2017 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 AC028_RS13540 770fe01b3677ccd25a13904aeb9316b1 377 SUPERFAMILY SSF53067 153 350 6.15E-25 T 05-07-2017 AC028_RS13540 770fe01b3677ccd25a13904aeb9316b1 377 SUPERFAMILY SSF53067 76 121 6.15E-25 T 05-07-2017 AC028_RS13540 770fe01b3677ccd25a13904aeb9316b1 377 SUPERFAMILY SSF53067 10 43 6.15E-25 T 05-07-2017 AC028_RS15110 36645e60f19a82f641b7cfa1926898f7 428 SMART SM00382 51 223 5.4E-12 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS15110 36645e60f19a82f641b7cfa1926898f7 428 Gene3D G3DSA:2.70.50.60 268 418 5.8E-45 T 05-07-2017 AC028_RS15110 36645e60f19a82f641b7cfa1926898f7 428 Pfam PF00005 ABC transporter 42 174 2.8E-22 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS15110 36645e60f19a82f641b7cfa1926898f7 428 Gene3D G3DSA:3.40.50.300 4 235 9.2E-45 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS15110 36645e60f19a82f641b7cfa1926898f7 428 SUPERFAMILY SSF52540 37 234 5.42E-44 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS15110 36645e60f19a82f641b7cfa1926898f7 428 Pfam PF14524 Wzt C-terminal domain 278 419 4.6E-23 T 05-07-2017 IPR029439 Wzt, C-terminal AC028_RS15110 36645e60f19a82f641b7cfa1926898f7 428 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS18650 5e6bebc69e05ab6f84f75da36bb9300e 133 PIRSF PIRSF002889 1 133 4.3E-35 T 05-07-2017 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AC028_RS18650 5e6bebc69e05ab6f84f75da36bb9300e 133 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 05-07-2017 IPR019776 Flagellar basal body rod protein, conserved site AC028_RS18650 5e6bebc69e05ab6f84f75da36bb9300e 133 Pfam PF00460 Flagella basal body rod protein 11 39 7.7E-8 T 05-07-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AC028_RS18650 5e6bebc69e05ab6f84f75da36bb9300e 133 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 130 3.7E-29 T 05-07-2017 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AC028_RS14610 76ccbccdf515d393d0a4a44caa9cbbbf 159 Gene3D G3DSA:3.30.70.920 61 157 2.1E-31 T 05-07-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AC028_RS14610 76ccbccdf515d393d0a4a44caa9cbbbf 159 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 3.5E-20 T 05-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AC028_RS14610 76ccbccdf515d393d0a4a44caa9cbbbf 159 Gene3D G3DSA:1.10.10.10 9 60 2.1E-25 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS14610 76ccbccdf515d393d0a4a44caa9cbbbf 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 3.6E-19 T 05-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AC028_RS14610 76ccbccdf515d393d0a4a44caa9cbbbf 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 3.6E-19 T 05-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AC028_RS14610 76ccbccdf515d393d0a4a44caa9cbbbf 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 3.6E-19 T 05-07-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 AC028_RS14610 76ccbccdf515d393d0a4a44caa9cbbbf 159 SMART SM00344 8 117 7.0E-46 T 05-07-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AC028_RS14610 76ccbccdf515d393d0a4a44caa9cbbbf 159 SUPERFAMILY SSF54909 70 157 2.41E-20 T 05-07-2017 IPR011008 Dimeric alpha-beta barrel AC028_RS14610 76ccbccdf515d393d0a4a44caa9cbbbf 159 SUPERFAMILY SSF46785 7 66 1.71E-18 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS14610 76ccbccdf515d393d0a4a44caa9cbbbf 159 Pfam PF01037 Lrp/AsnC ligand binding domain 74 148 1.4E-20 T 05-07-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AC028_RS14610 76ccbccdf515d393d0a4a44caa9cbbbf 159 ProSitePatterns PS00519 AsnC-type HTH domain signature. 26 52 - T 05-07-2017 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AC028_RS19915 8a451570e29d5b29e902a6af6e5384c6 400 PIRSF PIRSF000443 1 400 1.4E-138 T 05-07-2017 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 AC028_RS19915 8a451570e29d5b29e902a6af6e5384c6 400 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 17 295 5.7E-94 T 05-07-2017 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 AC028_RS19915 8a451570e29d5b29e902a6af6e5384c6 400 Gene3D G3DSA:3.40.50.1820 232 297 1.6E-28 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS19915 8a451570e29d5b29e902a6af6e5384c6 400 Gene3D G3DSA:3.40.50.1820 337 398 1.6E-28 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS19915 8a451570e29d5b29e902a6af6e5384c6 400 Gene3D G3DSA:3.40.50.1820 17 200 1.6E-28 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS19915 8a451570e29d5b29e902a6af6e5384c6 400 SUPERFAMILY SSF53474 325 398 8.92E-87 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS19915 8a451570e29d5b29e902a6af6e5384c6 400 SUPERFAMILY SSF53474 12 293 8.92E-87 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS19915 8a451570e29d5b29e902a6af6e5384c6 400 Pfam PF00561 alpha/beta hydrolase fold 45 385 2.3E-27 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS19915 8a451570e29d5b29e902a6af6e5384c6 400 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 2 399 43.89 T 05-07-2017 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 AC028_RS03200 d0b66f70b81719563c1bb951539d17e2 169 SUPERFAMILY SSF54523 26 148 2.43E-9 T 05-07-2017 AC028_RS03200 d0b66f70b81719563c1bb951539d17e2 169 Pfam PF12019 Type II transport protein GspH 63 153 9.5E-6 T 05-07-2017 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AC028_RS03200 d0b66f70b81719563c1bb951539d17e2 169 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 21 156 4.2E-13 T 05-07-2017 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AC028_RS12925 d381447fe9d5bc3daa9bf78bbe3f2cf1 400 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 397 2.1E-179 T 05-07-2017 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AC028_RS12925 d381447fe9d5bc3daa9bf78bbe3f2cf1 400 Pfam PF01370 NAD dependent epimerase/dehydratase family 19 80 1.2E-4 T 05-07-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AC028_RS12925 d381447fe9d5bc3daa9bf78bbe3f2cf1 400 SUPERFAMILY SSF52440 3 113 1.87E-33 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS12925 d381447fe9d5bc3daa9bf78bbe3f2cf1 400 Gene3D G3DSA:3.40.50.20 4 121 2.8E-39 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS12925 d381447fe9d5bc3daa9bf78bbe3f2cf1 400 Pfam PF02222 ATP-grasp domain 124 295 6.7E-57 T 05-07-2017 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AC028_RS12925 d381447fe9d5bc3daa9bf78bbe3f2cf1 400 Gene3D G3DSA:3.30.1490.20 124 199 2.4E-27 T 05-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AC028_RS12925 d381447fe9d5bc3daa9bf78bbe3f2cf1 400 SUPERFAMILY SSF51246 325 396 1.73E-14 T 05-07-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS12925 d381447fe9d5bc3daa9bf78bbe3f2cf1 400 Gene3D G3DSA:3.30.470.20 200 393 1.1E-68 T 05-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AC028_RS12925 d381447fe9d5bc3daa9bf78bbe3f2cf1 400 SUPERFAMILY SSF56059 114 314 4.42E-59 T 05-07-2017 AC028_RS12925 d381447fe9d5bc3daa9bf78bbe3f2cf1 400 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 397 52.339 T 05-07-2017 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AC028_RS22135 1e36624ac7238e034a1ee6ff0ede0fa4 601 Pfam PF05960 Bacterial protein of unknown function (DUF885) 59 594 1.1E-108 T 05-07-2017 IPR010281 Protein of unknown function DUF885 AC028_RS19840 49480c36c4b9dacc7e6b9246adaf3bac 430 Pfam PF04079 Segregation and condensation complex subunit ScpB 33 194 2.8E-51 T 05-07-2017 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AC028_RS19840 49480c36c4b9dacc7e6b9246adaf3bac 430 Gene3D G3DSA:1.10.10.10 26 107 7.7E-18 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS19840 49480c36c4b9dacc7e6b9246adaf3bac 430 Gene3D G3DSA:1.10.10.10 109 185 1.1E-33 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS19840 49480c36c4b9dacc7e6b9246adaf3bac 430 SUPERFAMILY SSF46785 110 185 7.58E-24 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS19840 49480c36c4b9dacc7e6b9246adaf3bac 430 SUPERFAMILY SSF46785 26 107 6.53E-16 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS19840 49480c36c4b9dacc7e6b9246adaf3bac 430 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 33 196 3.4E-34 T 05-07-2017 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AC028_RS05400 eaaabdd1a7bb0bdf2f1314b08447d722 431 SUPERFAMILY SSF53901 288 431 1.49E-29 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS05400 eaaabdd1a7bb0bdf2f1314b08447d722 431 SUPERFAMILY SSF53901 12 288 7.12E-55 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS05400 eaaabdd1a7bb0bdf2f1314b08447d722 431 Gene3D G3DSA:3.40.47.10 219 294 3.7E-46 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS05400 eaaabdd1a7bb0bdf2f1314b08447d722 431 Gene3D G3DSA:3.40.47.10 12 131 3.7E-46 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS05400 eaaabdd1a7bb0bdf2f1314b08447d722 431 Gene3D G3DSA:3.40.47.10 172 218 4.4E-45 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS05400 eaaabdd1a7bb0bdf2f1314b08447d722 431 Gene3D G3DSA:3.40.47.10 296 430 4.4E-45 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS05400 eaaabdd1a7bb0bdf2f1314b08447d722 431 Pfam PF00108 Thiolase, N-terminal domain 12 281 2.3E-53 T 05-07-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AC028_RS05400 eaaabdd1a7bb0bdf2f1314b08447d722 431 PIRSF PIRSF000429 6 431 2.0E-101 T 05-07-2017 IPR002155 Thiolase GO:0008152|GO:0016747 AC028_RS05400 eaaabdd1a7bb0bdf2f1314b08447d722 431 Pfam PF02803 Thiolase, C-terminal domain 290 431 1.9E-30 T 05-07-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AC028_RS05400 eaaabdd1a7bb0bdf2f1314b08447d722 431 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 14 430 5.6E-113 T 05-07-2017 IPR002155 Thiolase GO:0008152|GO:0016747 AC028_RS13160 6e09acc987ac42a87403c1b23b7c1458 376 SMART SM00448 18 132 1.5E-32 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS13160 6e09acc987ac42a87403c1b23b7c1458 376 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 267 361 2.9E-14 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13160 6e09acc987ac42a87403c1b23b7c1458 376 Gene3D G3DSA:3.40.50.2300 15 143 9.3E-35 T 05-07-2017 AC028_RS13160 6e09acc987ac42a87403c1b23b7c1458 376 SUPERFAMILY SSF47384 145 224 1.47E-15 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS13160 6e09acc987ac42a87403c1b23b7c1458 376 SUPERFAMILY SSF55874 213 361 2.23E-24 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13160 6e09acc987ac42a87403c1b23b7c1458 376 SMART SM00387 267 373 1.1E-18 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13160 6e09acc987ac42a87403c1b23b7c1458 376 SUPERFAMILY SSF52172 17 156 1.25E-35 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS13160 6e09acc987ac42a87403c1b23b7c1458 376 Gene3D G3DSA:3.30.565.10 210 362 1.9E-28 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13160 6e09acc987ac42a87403c1b23b7c1458 376 SMART SM00388 158 224 2.0E-12 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS13160 6e09acc987ac42a87403c1b23b7c1458 376 Pfam PF00512 His Kinase A (phospho-acceptor) domain 161 222 3.3E-12 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS13160 6e09acc987ac42a87403c1b23b7c1458 376 Gene3D G3DSA:1.10.287.130 151 209 4.3E-13 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS13160 6e09acc987ac42a87403c1b23b7c1458 376 Pfam PF00072 Response regulator receiver domain 20 132 5.7E-24 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS09185 7da337f1c341e132bf4a453a44128e84 419 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 30 127 2.4E-31 T 05-07-2017 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AC028_RS09185 7da337f1c341e132bf4a453a44128e84 419 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 102 127 - T 05-07-2017 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AC028_RS09185 7da337f1c341e132bf4a453a44128e84 419 SUPERFAMILY SSF54826 26 129 6.3E-31 T 05-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS09185 7da337f1c341e132bf4a453a44128e84 419 Pfam PF13378 Enolase C-terminal domain-like 211 394 4.3E-38 T 05-07-2017 IPR029065 Enolase C-terminal domain-like AC028_RS09185 7da337f1c341e132bf4a453a44128e84 419 Gene3D G3DSA:3.30.390.10 23 134 5.1E-41 T 05-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS09185 7da337f1c341e132bf4a453a44128e84 419 SMART SM00922 145 274 1.7E-12 T 05-07-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AC028_RS09185 7da337f1c341e132bf4a453a44128e84 419 SUPERFAMILY SSF51604 115 401 1.05E-69 T 05-07-2017 IPR029065 Enolase C-terminal domain-like AC028_RS09185 7da337f1c341e132bf4a453a44128e84 419 Gene3D G3DSA:3.20.20.120 135 381 8.6E-78 T 05-07-2017 IPR029065 Enolase C-terminal domain-like AC028_RS19900 645923f2831f4414d9b9bee905165173 200 Pfam PF08534 Redoxin 49 171 1.7E-16 T 05-07-2017 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AC028_RS19900 645923f2831f4414d9b9bee905165173 200 ProSitePatterns PS00194 Thioredoxin family active site. 78 96 - T 05-07-2017 IPR017937 Thioredoxin, conserved site GO:0045454 AC028_RS19900 645923f2831f4414d9b9bee905165173 200 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 17 183 7.7E-52 T 05-07-2017 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AC028_RS19900 645923f2831f4414d9b9bee905165173 200 Gene3D G3DSA:3.40.30.10 21 184 5.4E-35 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS19900 645923f2831f4414d9b9bee905165173 200 SUPERFAMILY SSF52833 43 183 1.21E-29 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS05290 109d09b23aee3397c677788ac696deba 190 Gene3D G3DSA:2.40.128.110 28 188 4.6E-31 T 05-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AC028_RS05290 109d09b23aee3397c677788ac696deba 190 SMART SM00867 25 185 7.0E-21 T 05-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AC028_RS05290 109d09b23aee3397c677788ac696deba 190 SUPERFAMILY SSF101874 28 185 1.44E-26 T 05-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AC028_RS05290 109d09b23aee3397c677788ac696deba 190 Pfam PF04264 YceI-like domain 28 180 2.4E-20 T 05-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AC028_RS05145 47de6d38c5e23fab2a2c93a3b26081f1 527 Gene3D G3DSA:2.115.10.20 47 333 7.0E-76 T 05-07-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AC028_RS05145 47de6d38c5e23fab2a2c93a3b26081f1 527 SUPERFAMILY SSF75005 47 325 4.83E-78 T 05-07-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AC028_RS05145 47de6d38c5e23fab2a2c93a3b26081f1 527 Gene3D G3DSA:2.60.120.200 345 525 1.7E-17 T 05-07-2017 IPR013320 Concanavalin A-like lectin/glucanase domain AC028_RS05145 47de6d38c5e23fab2a2c93a3b26081f1 527 SUPERFAMILY SSF49899 344 524 4.75E-26 T 05-07-2017 IPR013320 Concanavalin A-like lectin/glucanase domain AC028_RS05145 47de6d38c5e23fab2a2c93a3b26081f1 527 Pfam PF04616 Glycosyl hydrolases family 43 48 320 2.0E-91 T 05-07-2017 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AC028_RS22185 b4fc78d13db614496eed038b33edd6f9 294 SUPERFAMILY SSF56317 1 275 3.27E-48 T 05-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AC028_RS22185 b4fc78d13db614496eed038b33edd6f9 294 Pfam PF00795 Carbon-nitrogen hydrolase 2 213 2.7E-19 T 05-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AC028_RS22185 b4fc78d13db614496eed038b33edd6f9 294 Gene3D G3DSA:3.60.110.10 1 276 2.9E-48 T 05-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AC028_RS05165 34c42ea7842129e787c8e52fbd876e66 284 Gene3D G3DSA:2.60.120.520 24 138 5.8E-45 T 05-07-2017 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AC028_RS05165 34c42ea7842129e787c8e52fbd876e66 284 SUPERFAMILY SSF51182 6 268 3.08E-98 T 05-07-2017 IPR011051 RmlC-like cupin domain AC028_RS05165 34c42ea7842129e787c8e52fbd876e66 284 Pfam PF04962 KduI/IolB family 72 273 6.2E-36 T 05-07-2017 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AC028_RS05165 34c42ea7842129e787c8e52fbd876e66 284 PIRSF PIRSF006625 5 284 4.1E-130 T 05-07-2017 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AC028_RS05165 34c42ea7842129e787c8e52fbd876e66 284 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 5 284 53.236 T 05-07-2017 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AC028_RS05165 34c42ea7842129e787c8e52fbd876e66 284 Gene3D G3DSA:2.60.120.500 139 284 3.9E-68 T 05-07-2017 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 AC028_RS14075 546520519d1a459b27ae34b718ee1ba8 304 PIRSF PIRSF026649 1 295 2.1E-76 T 05-07-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AC028_RS14075 546520519d1a459b27ae34b718ee1ba8 304 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 284 1.8E-45 T 05-07-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AC028_RS07040 a07147e140c0256ae34cf59227ed13d7 268 Pfam PF01435 Peptidase family M48 60 246 7.3E-37 T 05-07-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AC028_RS07040 a07147e140c0256ae34cf59227ed13d7 268 Gene3D G3DSA:3.30.2010.10 57 141 2.7E-17 T 05-07-2017 AC028_RS15705 700451b54ff4ec9ebf7c9c7e7c2ba899 255 Gene3D G3DSA:3.20.20.140 1 253 1.7E-80 T 05-07-2017 AC028_RS15705 700451b54ff4ec9ebf7c9c7e7c2ba899 255 Pfam PF01026 TatD related DNase 4 251 3.8E-66 T 05-07-2017 IPR001130 TatD family GO:0016788 AC028_RS15705 700451b54ff4ec9ebf7c9c7e7c2ba899 255 PIRSF PIRSF005902 1 255 1.6E-68 T 05-07-2017 IPR001130 TatD family GO:0016788 AC028_RS15705 700451b54ff4ec9ebf7c9c7e7c2ba899 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 05-07-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AC028_RS15705 700451b54ff4ec9ebf7c9c7e7c2ba899 255 SUPERFAMILY SSF51556 1 253 1.53E-80 T 05-07-2017 IPR032466 Metal-dependent hydrolase AC028_RS15705 700451b54ff4ec9ebf7c9c7e7c2ba899 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 05-07-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AC028_RS15705 700451b54ff4ec9ebf7c9c7e7c2ba899 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 188 204 - T 05-07-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AC028_RS05050 097f1d9d2013b92a9a0509acd0b97ebb 138 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 67 121 2.0E-15 T 05-07-2017 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 AC028_RS05610 25387ed089a0e84b416a272d002fdf8d 209 Pfam PF01553 Acyltransferase 59 168 1.1E-11 T 05-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AC028_RS05610 25387ed089a0e84b416a272d002fdf8d 209 SUPERFAMILY SSF69593 26 185 2.48E-21 T 05-07-2017 AC028_RS05610 25387ed089a0e84b416a272d002fdf8d 209 SMART SM00563 59 171 8.7E-25 T 05-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AC028_RS21610 7558af1a47e777b17fb4259c74db3434 435 SUPERFAMILY SSF56762 34 435 4.19E-135 T 05-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21610 7558af1a47e777b17fb4259c74db3434 435 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 24 435 7.6E-182 T 05-07-2017 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21610 7558af1a47e777b17fb4259c74db3434 435 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 138 435 2.8E-119 T 05-07-2017 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21610 7558af1a47e777b17fb4259c74db3434 435 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 61 72 - T 05-07-2017 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21610 7558af1a47e777b17fb4259c74db3434 435 Gene3D G3DSA:1.10.645.10 18 420 1.9E-65 T 05-07-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21610 7558af1a47e777b17fb4259c74db3434 435 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 17 435 49.075 T 05-07-2017 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS13305 99c2f2ee84da7a975f1d03f20ebef69a 411 SUPERFAMILY SSF53383 12 398 1.48E-63 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS13305 99c2f2ee84da7a975f1d03f20ebef69a 411 Gene3D G3DSA:3.90.1150.10 281 399 2.9E-4 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS13305 99c2f2ee84da7a975f1d03f20ebef69a 411 Gene3D G3DSA:3.40.640.10 58 280 6.0E-49 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS13305 99c2f2ee84da7a975f1d03f20ebef69a 411 Pfam PF00266 Aminotransferase class-V 66 386 1.6E-20 T 05-07-2017 IPR000192 Aminotransferase class V domain AC028_RS13975 7313748481596065cc71be9cb79598be 187 Pfam PF01300 Telomere recombination 13 186 1.7E-40 T 05-07-2017 IPR006070 YrdC-like domain GO:0003725 AC028_RS13975 7313748481596065cc71be9cb79598be 187 SUPERFAMILY SSF55821 7 185 1.01E-50 T 05-07-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain AC028_RS13975 7313748481596065cc71be9cb79598be 187 Gene3D G3DSA:3.90.870.10 5 186 2.6E-54 T 05-07-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain AC028_RS13975 7313748481596065cc71be9cb79598be 187 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 4 186 38.919 T 05-07-2017 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 AC028_RS03695 a149247b6742b588996680f4e04959e0 854 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 542 828 9.2E-94 T 05-07-2017 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal AC028_RS03695 a149247b6742b588996680f4e04959e0 854 SUPERFAMILY SSF55729 810 827 1.78E-16 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS03695 a149247b6742b588996680f4e04959e0 854 SUPERFAMILY SSF55729 650 783 1.78E-16 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS03900 7a5621dc28013370d92a537b0cfc6471 334 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 3 285 3.0E-78 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS03900 7a5621dc28013370d92a537b0cfc6471 334 SUPERFAMILY SSF51445 1 284 2.21E-77 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS03900 7a5621dc28013370d92a537b0cfc6471 334 Gene3D G3DSA:3.20.20.300 1 292 4.0E-86 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS03900 7a5621dc28013370d92a537b0cfc6471 334 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 233 250 - T 05-07-2017 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AC028_RS03900 7a5621dc28013370d92a537b0cfc6471 334 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 1 331 44.833 T 05-07-2017 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 AC028_RS16165 e9614747c1afb33399e96223e9b021e7 91 Gene3D G3DSA:3.10.20.280 1 80 2.4E-24 T 05-07-2017 IPR005346 RnfH protein AC028_RS16165 e9614747c1afb33399e96223e9b021e7 91 Pfam PF03658 RnfH family Ubiquitin 1 78 1.5E-20 T 05-07-2017 IPR005346 RnfH protein AC028_RS16165 e9614747c1afb33399e96223e9b021e7 91 Hamap MF_00460 Protein RnfH [rnfH]. 1 86 19.723 T 05-07-2017 IPR005346 RnfH protein AC028_RS16165 e9614747c1afb33399e96223e9b021e7 91 SUPERFAMILY SSF54285 1 70 3.92E-16 T 05-07-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AC028_RS21165 0aa796b3bf8c77e2c4b5fef6cb925c80 158 Pfam PF03168 Late embryogenesis abundant protein 50 137 1.8E-5 T 05-07-2017 IPR004864 Late embryogenesis abundant protein, LEA-14 AC028_RS21165 0aa796b3bf8c77e2c4b5fef6cb925c80 158 SUPERFAMILY SSF117070 16 128 7.98E-6 T 05-07-2017 AC028_RS06595 8b15f024260f9a8d0c3280bae82b9afa 1331 Gene3D G3DSA:3.40.50.300 734 735 5.6E-4 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06595 8b15f024260f9a8d0c3280bae82b9afa 1331 Gene3D G3DSA:3.40.50.300 865 908 5.6E-4 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06595 8b15f024260f9a8d0c3280bae82b9afa 1331 Pfam PF13558 Putative exonuclease SbcCD, C subunit 978 1067 1.4E-20 T 05-07-2017 AC028_RS06595 8b15f024260f9a8d0c3280bae82b9afa 1331 SUPERFAMILY SSF52540 34 80 8.27E-12 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06595 8b15f024260f9a8d0c3280bae82b9afa 1331 SUPERFAMILY SSF52540 918 1080 8.27E-12 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06595 8b15f024260f9a8d0c3280bae82b9afa 1331 Pfam PF13555 P-loop containing region of AAA domain 31 90 3.9E-22 T 05-07-2017 AC028_RS06595 8b15f024260f9a8d0c3280bae82b9afa 1331 Gene3D G3DSA:3.40.1140.10 28 250 1.3E-24 T 05-07-2017 AC028_RS18910 a1503c7fbc99b3be06608dc5cf256e16 310 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.5E-7 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18910 a1503c7fbc99b3be06608dc5cf256e16 310 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.5E-7 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18910 a1503c7fbc99b3be06608dc5cf256e16 310 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.5E-7 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18910 a1503c7fbc99b3be06608dc5cf256e16 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 5.3E-24 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18910 a1503c7fbc99b3be06608dc5cf256e16 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.3E-24 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18910 a1503c7fbc99b3be06608dc5cf256e16 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.3E-24 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18910 a1503c7fbc99b3be06608dc5cf256e16 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.3E-24 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18910 a1503c7fbc99b3be06608dc5cf256e16 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 5.3E-24 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18910 a1503c7fbc99b3be06608dc5cf256e16 310 Gene3D G3DSA:3.40.50.720 11 254 6.0E-58 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS18910 a1503c7fbc99b3be06608dc5cf256e16 310 Pfam PF00106 short chain dehydrogenase 12 195 2.1E-44 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS18910 a1503c7fbc99b3be06608dc5cf256e16 310 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 216 0.0016 T 05-07-2017 AC028_RS18910 a1503c7fbc99b3be06608dc5cf256e16 310 SUPERFAMILY SSF51735 5 257 9.34E-60 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS02540 33ad03952bf612fb3a73c6895e7bedaf 526 Gene3D G3DSA:3.40.605.10 7 267 1.2E-42 T 05-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AC028_RS02540 33ad03952bf612fb3a73c6895e7bedaf 526 SUPERFAMILY SSF53720 20 519 2.62E-99 T 05-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AC028_RS02540 33ad03952bf612fb3a73c6895e7bedaf 526 Gene3D G3DSA:3.40.309.10 270 456 8.2E-55 T 05-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AC028_RS02540 33ad03952bf612fb3a73c6895e7bedaf 526 Pfam PF00171 Aldehyde dehydrogenase family 24 467 1.4E-38 T 05-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AC028_RS19940 f9cebfa445feefb3b33c3b750ebad1f7 383 PIRSF PIRSF000267 6 382 6.8E-115 T 05-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AC028_RS19940 f9cebfa445feefb3b33c3b750ebad1f7 383 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 380 9.5E-129 T 05-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AC028_RS19940 f9cebfa445feefb3b33c3b750ebad1f7 383 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 11 366 5.5E-103 T 05-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AC028_RS17420 3be6bfe10f67a48bdaeae1fbcc73f4d5 330 SUPERFAMILY SSF52821 207 315 1.96E-21 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS17420 3be6bfe10f67a48bdaeae1fbcc73f4d5 330 Gene3D G3DSA:3.40.250.10 208 313 4.8E-16 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS17420 3be6bfe10f67a48bdaeae1fbcc73f4d5 330 Pfam PF09335 SNARE associated Golgi protein 27 157 4.5E-14 T 05-07-2017 IPR032816 SNARE associated Golgi protein AC028_RS17420 3be6bfe10f67a48bdaeae1fbcc73f4d5 330 Pfam PF00581 Rhodanese-like domain 224 306 5.5E-6 T 05-07-2017 IPR001763 Rhodanese-like domain AC028_RS03605 67e63fa27ae6d615d179c54b56370284 81 Pfam PF10038 Protein of unknown function (DUF2274) 5 69 7.2E-27 T 05-07-2017 IPR018733 Protein of unknown function DUF2274 AC028_RS18515 81d09b4a48343cf2f938b4448b112988 34 SUPERFAMILY SSF51735 1 33 1.25E-11 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS18515 81d09b4a48343cf2f938b4448b112988 34 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 1 32 1.2E-9 T 05-07-2017 AC028_RS18515 81d09b4a48343cf2f938b4448b112988 34 Gene3D G3DSA:3.40.50.720 1 33 7.5E-12 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS06565 c215ef0d8cb61b919ac6f84bf29db481 197 SUPERFAMILY SSF48613 11 191 4.94E-47 T 05-07-2017 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AC028_RS06565 c215ef0d8cb61b919ac6f84bf29db481 197 Pfam PF01126 Heme oxygenase 13 65 1.0E-5 T 05-07-2017 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|Reactome: R-HSA-189483|Reactome: R-HSA-917937 AC028_RS06565 c215ef0d8cb61b919ac6f84bf29db481 197 Pfam PF01126 Heme oxygenase 110 191 6.6E-5 T 05-07-2017 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|Reactome: R-HSA-189483|Reactome: R-HSA-917937 AC028_RS06565 c215ef0d8cb61b919ac6f84bf29db481 197 Gene3D G3DSA:1.20.910.10 9 192 4.6E-51 T 05-07-2017 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AC028_RS02235 c6007747030034268cd25bd03a52be80 319 Gene3D G3DSA:3.40.50.1100 42 142 1.8E-41 T 05-07-2017 AC028_RS02235 c6007747030034268cd25bd03a52be80 319 Gene3D G3DSA:3.40.50.1100 148 308 1.5E-67 T 05-07-2017 AC028_RS02235 c6007747030034268cd25bd03a52be80 319 Gene3D G3DSA:3.40.50.1100 2 41 1.5E-67 T 05-07-2017 AC028_RS02235 c6007747030034268cd25bd03a52be80 319 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 291 3.6E-63 T 05-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AC028_RS02235 c6007747030034268cd25bd03a52be80 319 SUPERFAMILY SSF53686 2 305 2.49E-92 T 05-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AC028_RS02235 c6007747030034268cd25bd03a52be80 319 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 303 1.2E-123 T 05-07-2017 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AC028_RS02235 c6007747030034268cd25bd03a52be80 319 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 303 1.7E-130 T 05-07-2017 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AC028_RS02235 c6007747030034268cd25bd03a52be80 319 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 05-07-2017 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AC028_RS12175 2545e54d74f7c9daba4bd36524581162 126 Gene3D G3DSA:3.10.450.50 9 119 1.3E-14 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS12175 2545e54d74f7c9daba4bd36524581162 126 SUPERFAMILY SSF54427 9 119 4.97E-16 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS12175 2545e54d74f7c9daba4bd36524581162 126 Pfam PF14534 Domain of unknown function (DUF4440) 11 112 3.5E-17 T 05-07-2017 IPR027843 Domain of unknown function DUF4440 AC028_RS04365 62fa4b653d16172155c27f004a71d528 242 Pfam PF03309 Type III pantothenate kinase 5 192 1.1E-35 T 05-07-2017 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AC028_RS04365 62fa4b653d16172155c27f004a71d528 242 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 6 234 4.5E-20 T 05-07-2017 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AC028_RS04365 62fa4b653d16172155c27f004a71d528 242 Gene3D G3DSA:3.30.420.40 86 238 1.7E-31 T 05-07-2017 AC028_RS04365 62fa4b653d16172155c27f004a71d528 242 SUPERFAMILY SSF53067 5 110 3.82E-20 T 05-07-2017 AC028_RS04365 62fa4b653d16172155c27f004a71d528 242 SUPERFAMILY SSF53067 113 236 1.17E-22 T 05-07-2017 AC028_RS04365 62fa4b653d16172155c27f004a71d528 242 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 240 14.362 T 05-07-2017 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AC028_RS12230 878cc5e9a9595351fb5739bed04d7e67 650 Gene3D G3DSA:3.90.260.10 309 589 2.9E-51 T 05-07-2017 IPR002931 Transglutaminase-like AC028_RS12230 878cc5e9a9595351fb5739bed04d7e67 650 Pfam PF01841 Transglutaminase-like superfamily 356 470 5.2E-27 T 05-07-2017 IPR002931 Transglutaminase-like AC028_RS12230 878cc5e9a9595351fb5739bed04d7e67 650 Pfam PF11992 Domain of unknown function (DUF3488) 13 326 5.2E-83 T 05-07-2017 IPR021878 Protein of unknown function DUF3488 AC028_RS12230 878cc5e9a9595351fb5739bed04d7e67 650 SUPERFAMILY SSF54001 277 595 1.04E-63 T 05-07-2017 AC028_RS12230 878cc5e9a9595351fb5739bed04d7e67 650 SMART SM00460 401 472 2.7E-21 T 05-07-2017 IPR002931 Transglutaminase-like AC028_RS08020 a04c99576e88c6b847c904b0ca53c69f 942 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 115 5.4E-10 T 05-07-2017 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS08020 a04c99576e88c6b847c904b0ca53c69f 942 Pfam PF00361 Proton-conducting membrane transporter 128 415 4.2E-66 T 05-07-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS08020 a04c99576e88c6b847c904b0ca53c69f 942 Pfam PF13244 Domain of unknown function (DUF4040) 611 675 7.5E-18 T 05-07-2017 IPR025383 Domain of unknown function DUF4040 AC028_RS08020 a04c99576e88c6b847c904b0ca53c69f 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 105 125 2.6E-38 T 05-07-2017 AC028_RS08020 a04c99576e88c6b847c904b0ca53c69f 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 2.6E-38 T 05-07-2017 AC028_RS08020 a04c99576e88c6b847c904b0ca53c69f 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 240 266 2.6E-38 T 05-07-2017 AC028_RS08020 a04c99576e88c6b847c904b0ca53c69f 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 152 173 2.6E-38 T 05-07-2017 AC028_RS08020 a04c99576e88c6b847c904b0ca53c69f 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 308 320 2.6E-38 T 05-07-2017 AC028_RS08020 a04c99576e88c6b847c904b0ca53c69f 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 239 2.6E-38 T 05-07-2017 AC028_RS08020 a04c99576e88c6b847c904b0ca53c69f 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 417 436 2.6E-38 T 05-07-2017 AC028_RS08020 a04c99576e88c6b847c904b0ca53c69f 942 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 788 907 2.1E-29 T 05-07-2017 IPR007182 Na+/H+ antiporter MnhB subunit-related protein AC028_RS20340 39f5d7d592b5e0d794d22f9293d2e1f7 291 Pfam PF00135 Carboxylesterase family 46 157 1.1E-12 T 05-07-2017 IPR002018 Carboxylesterase, type B AC028_RS20340 39f5d7d592b5e0d794d22f9293d2e1f7 291 Pfam PF01738 Dienelactone hydrolase family 210 261 2.4E-4 T 05-07-2017 IPR002925 Dienelactone hydrolase GO:0016787 AC028_RS20340 39f5d7d592b5e0d794d22f9293d2e1f7 291 Gene3D G3DSA:3.40.50.1820 43 287 8.3E-57 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS20340 39f5d7d592b5e0d794d22f9293d2e1f7 291 SUPERFAMILY SSF53474 37 288 2.63E-47 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS07690 54c15833338c4d1ca67902fc7abcc8ea 340 Pfam PF04909 Amidohydrolase 3 329 1.3E-60 T 05-07-2017 IPR006680 Amidohydrolase-related GO:0016787 AC028_RS07690 54c15833338c4d1ca67902fc7abcc8ea 340 SUPERFAMILY SSF51556 1 334 7.94E-93 T 05-07-2017 IPR032466 Metal-dependent hydrolase AC028_RS07690 54c15833338c4d1ca67902fc7abcc8ea 340 Gene3D G3DSA:3.20.20.140 1 336 1.5E-89 T 05-07-2017 AC028_RS21205 1d780dcc90e4a1c007ac348ab2975084 282 SMART SM00849 34 269 2.4E-14 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS21205 1d780dcc90e4a1c007ac348ab2975084 282 Pfam PF00753 Metallo-beta-lactamase superfamily 33 244 5.2E-17 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS21205 1d780dcc90e4a1c007ac348ab2975084 282 SUPERFAMILY SSF56281 34 275 3.8E-28 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS21205 1d780dcc90e4a1c007ac348ab2975084 282 Gene3D G3DSA:3.60.15.10 23 273 3.6E-30 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS13940 31ce7da315309d2a34aa20c61b7bc2b0 458 Pfam PF01554 MatE 27 185 2.7E-24 T 05-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AC028_RS13940 31ce7da315309d2a34aa20c61b7bc2b0 458 Pfam PF01554 MatE 253 412 2.6E-29 T 05-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AC028_RS13940 31ce7da315309d2a34aa20c61b7bc2b0 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 27 427 2.2E-77 T 05-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AC028_RS07275 557916607cb636173b2e85dc8352c7f6 289 Hamap MF_01883 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [mdcB]. 1 289 118.188 T 05-07-2017 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AC028_RS07275 557916607cb636173b2e85dc8352c7f6 289 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 289 115.292 T 05-07-2017 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AC028_RS07275 557916607cb636173b2e85dc8352c7f6 289 TIGRFAM TIGR03132 malonate_mdcB: triphosphoribosyl-dephospho-CoA synthase MdcB 21 286 4.3E-107 T 05-07-2017 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AC028_RS07275 557916607cb636173b2e85dc8352c7f6 289 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 26 284 1.9E-78 T 05-07-2017 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AC028_RS00430 64454a3dc005de9ca6a4be96ae7b5fb4 387 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 55 290 3.6E-61 T 05-07-2017 IPR018642 Protein of unknown function DUF2066 AC028_RS14015 7734251215db7aff7a807b5d8f2c9718 307 SUPERFAMILY SSF50486 204 304 1.22E-30 T 05-07-2017 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AC028_RS14015 7734251215db7aff7a807b5d8f2c9718 307 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 303 36.18 T 05-07-2017 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AC028_RS14015 7734251215db7aff7a807b5d8f2c9718 307 SUPERFAMILY SSF53328 1 206 3.01E-63 T 05-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AC028_RS14015 7734251215db7aff7a807b5d8f2c9718 307 Gene3D G3DSA:3.10.25.10 206 301 1.3E-29 T 05-07-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AC028_RS14015 7734251215db7aff7a807b5d8f2c9718 307 Pfam PF02911 Formyl transferase, C-terminal domain 203 299 3.2E-27 T 05-07-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AC028_RS14015 7734251215db7aff7a807b5d8f2c9718 307 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 131 154 - T 05-07-2017 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AC028_RS14015 7734251215db7aff7a807b5d8f2c9718 307 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 301 7.2E-91 T 05-07-2017 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AC028_RS14015 7734251215db7aff7a807b5d8f2c9718 307 Pfam PF00551 Formyl transferase 1 176 1.3E-42 T 05-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AC028_RS14015 7734251215db7aff7a807b5d8f2c9718 307 Gene3D G3DSA:3.40.50.170 1 204 6.1E-71 T 05-07-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AC028_RS00020 9096e2bc111b5ef3479623ccc34441f3 520 Gene3D G3DSA:3.30.870.10 64 247 7.3E-35 T 05-07-2017 AC028_RS00020 9096e2bc111b5ef3479623ccc34441f3 520 SUPERFAMILY SSF56024 51 248 3.92E-39 T 05-07-2017 AC028_RS00020 9096e2bc111b5ef3479623ccc34441f3 520 Gene3D G3DSA:3.30.870.10 269 477 3.3E-34 T 05-07-2017 AC028_RS00020 9096e2bc111b5ef3479623ccc34441f3 520 Pfam PF13091 PLD-like domain 324 463 1.4E-18 T 05-07-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 AC028_RS00020 9096e2bc111b5ef3479623ccc34441f3 520 Pfam PF13091 PLD-like domain 88 235 9.4E-18 T 05-07-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 AC028_RS00020 9096e2bc111b5ef3479623ccc34441f3 520 SUPERFAMILY SSF56024 287 477 1.26E-32 T 05-07-2017 AC028_RS00020 9096e2bc111b5ef3479623ccc34441f3 520 SMART SM00155 176 203 2.2E-4 T 05-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AC028_RS00020 9096e2bc111b5ef3479623ccc34441f3 520 SMART SM00155 411 438 5.6E-6 T 05-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AC028_RS12090 44b3778ddf4e3c03e66c3cf5529d3e49 90 SMART SM00411 1 90 7.2E-45 T 05-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AC028_RS12090 44b3778ddf4e3c03e66c3cf5529d3e49 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.2E-34 T 05-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AC028_RS12090 44b3778ddf4e3c03e66c3cf5529d3e49 90 Gene3D G3DSA:4.10.520.10 1 90 1.3E-38 T 05-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AC028_RS12090 44b3778ddf4e3c03e66c3cf5529d3e49 90 SUPERFAMILY SSF47729 1 90 5.0E-33 T 05-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AC028_RS12090 44b3778ddf4e3c03e66c3cf5529d3e49 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.8E-19 T 05-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AC028_RS12090 44b3778ddf4e3c03e66c3cf5529d3e49 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.8E-19 T 05-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AC028_RS12090 44b3778ddf4e3c03e66c3cf5529d3e49 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.8E-19 T 05-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AC028_RS12090 44b3778ddf4e3c03e66c3cf5529d3e49 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 05-07-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AC028_RS07290 b202b49f37a00d2064055cf41876bd62 239 SMART SM00895 88 212 7.7E-21 T 05-07-2017 IPR011711 GntR, C-terminal AC028_RS07290 b202b49f37a00d2064055cf41876bd62 239 SMART SM00345 20 78 2.0E-15 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS07290 b202b49f37a00d2064055cf41876bd62 239 SUPERFAMILY SSF48008 84 217 2.09E-25 T 05-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal AC028_RS07290 b202b49f37a00d2064055cf41876bd62 239 Gene3D G3DSA:1.20.120.530 81 222 1.8E-30 T 05-07-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal AC028_RS07290 b202b49f37a00d2064055cf41876bd62 239 Gene3D G3DSA:1.10.10.10 8 79 1.5E-23 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS07290 b202b49f37a00d2064055cf41876bd62 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 1.3E-5 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS07290 b202b49f37a00d2064055cf41876bd62 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 1.3E-5 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS07290 b202b49f37a00d2064055cf41876bd62 239 SUPERFAMILY SSF46785 12 82 3.63E-19 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS07290 b202b49f37a00d2064055cf41876bd62 239 Pfam PF07729 FCD domain 88 210 6.9E-28 T 05-07-2017 IPR011711 GntR, C-terminal AC028_RS07290 b202b49f37a00d2064055cf41876bd62 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 1.6E-17 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS15675 0a0ddec318936338913fa0040e07b44f 371 Pfam PF02253 Phospholipase A1 111 365 5.2E-102 T 05-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AC028_RS15675 0a0ddec318936338913fa0040e07b44f 371 Gene3D G3DSA:2.40.230.10 110 366 1.3E-94 T 05-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AC028_RS15675 0a0ddec318936338913fa0040e07b44f 371 PRINTS PR01486 Bacterial phospholipase A1 protein signature 346 366 5.0E-36 T 05-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AC028_RS15675 0a0ddec318936338913fa0040e07b44f 371 PRINTS PR01486 Bacterial phospholipase A1 protein signature 253 271 5.0E-36 T 05-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AC028_RS15675 0a0ddec318936338913fa0040e07b44f 371 PRINTS PR01486 Bacterial phospholipase A1 protein signature 324 341 5.0E-36 T 05-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AC028_RS15675 0a0ddec318936338913fa0040e07b44f 371 PRINTS PR01486 Bacterial phospholipase A1 protein signature 163 180 5.0E-36 T 05-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AC028_RS15675 0a0ddec318936338913fa0040e07b44f 371 PRINTS PR01486 Bacterial phospholipase A1 protein signature 185 201 5.0E-36 T 05-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AC028_RS15675 0a0ddec318936338913fa0040e07b44f 371 PRINTS PR01486 Bacterial phospholipase A1 protein signature 208 227 5.0E-36 T 05-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AC028_RS15675 0a0ddec318936338913fa0040e07b44f 371 PRINTS PR01486 Bacterial phospholipase A1 protein signature 238 252 5.0E-36 T 05-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AC028_RS15675 0a0ddec318936338913fa0040e07b44f 371 PRINTS PR01486 Bacterial phospholipase A1 protein signature 288 306 5.0E-36 T 05-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AC028_RS15675 0a0ddec318936338913fa0040e07b44f 371 SUPERFAMILY SSF56931 112 366 1.27E-86 T 05-07-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 AC028_RS04275 3fb3257fa51d7a326316d9de124b287e 298 SUPERFAMILY SSF103481 205 295 2.09E-14 T 05-07-2017 AC028_RS04275 3fb3257fa51d7a326316d9de124b287e 298 Pfam PF00892 EamA-like transporter family 159 292 9.4E-19 T 05-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AC028_RS04275 3fb3257fa51d7a326316d9de124b287e 298 Pfam PF00892 EamA-like transporter family 17 148 1.9E-11 T 05-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AC028_RS04275 3fb3257fa51d7a326316d9de124b287e 298 SUPERFAMILY SSF103481 52 152 5.62E-10 T 05-07-2017 AC028_RS09255 9216e87cf6206f61b91d95e8f51fd44c 207 SUPERFAMILY SSF53639 31 176 1.08E-6 T 05-07-2017 IPR001303 Class II aldolase/adducin N-terminal AC028_RS12725 8b61df6c10e360af3e32c410e6930dbf 272 SMART SM00471 101 238 5.5E-4 T 05-07-2017 IPR003607 HD/PDEase domain AC028_RS12725 8b61df6c10e360af3e32c410e6930dbf 272 SUPERFAMILY SSF109604 3 261 3.87E-63 T 05-07-2017 AC028_RS12725 8b61df6c10e360af3e32c410e6930dbf 272 Pfam PF08668 HDOD domain 13 201 4.6E-52 T 05-07-2017 IPR013976 Metal-dependent hydrolase HDOD AC028_RS12725 8b61df6c10e360af3e32c410e6930dbf 272 Gene3D G3DSA:1.10.3150.10 2 253 1.0E-71 T 05-07-2017 IPR013976 Metal-dependent hydrolase HDOD AC028_RS20610 aa4af27cbbdec01d74e6d310f7700489 454 Gene3D G3DSA:3.40.605.10 3 241 3.0E-71 T 05-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AC028_RS20610 aa4af27cbbdec01d74e6d310f7700489 454 Gene3D G3DSA:3.40.309.10 242 426 6.1E-60 T 05-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AC028_RS20610 aa4af27cbbdec01d74e6d310f7700489 454 SUPERFAMILY SSF53720 3 453 1.01E-137 T 05-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AC028_RS20610 aa4af27cbbdec01d74e6d310f7700489 454 Pfam PF00171 Aldehyde dehydrogenase family 3 451 1.3E-136 T 05-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AC028_RS20610 aa4af27cbbdec01d74e6d310f7700489 454 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 255 266 - T 05-07-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AC028_RS15575 2544508494921e1c8db18a7671e243c0 474 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 27 453 2.1E-154 T 05-07-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AC028_RS15575 2544508494921e1c8db18a7671e243c0 474 Pfam PF02321 Outer membrane efflux protein 275 451 3.9E-25 T 05-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AC028_RS15575 2544508494921e1c8db18a7671e243c0 474 Pfam PF02321 Outer membrane efflux protein 52 242 1.7E-29 T 05-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AC028_RS15575 2544508494921e1c8db18a7671e243c0 474 Gene3D G3DSA:1.20.1600.10 39 78 1.5E-97 T 05-07-2017 AC028_RS15575 2544508494921e1c8db18a7671e243c0 474 Gene3D G3DSA:1.20.1600.10 130 302 1.5E-97 T 05-07-2017 AC028_RS15575 2544508494921e1c8db18a7671e243c0 474 Gene3D G3DSA:1.20.1600.10 340 454 1.5E-97 T 05-07-2017 AC028_RS15575 2544508494921e1c8db18a7671e243c0 474 SUPERFAMILY SSF56954 23 455 1.44E-101 T 05-07-2017 AC028_RS15575 2544508494921e1c8db18a7671e243c0 474 Gene3D G3DSA:2.20.200.10 89 129 1.0E-13 T 05-07-2017 AC028_RS15575 2544508494921e1c8db18a7671e243c0 474 Gene3D G3DSA:2.20.200.10 303 338 1.0E-13 T 05-07-2017 AC028_RS03000 eaa2f666db87faaf930c071acc0f8e29 289 SUPERFAMILY SSF69318 158 282 3.92E-5 T 05-07-2017 AC028_RS05675 ead7f3bc964622d48e06f22f0105d09c 431 ProSitePatterns PS00161 Isocitrate lyase signature. 186 191 - T 05-07-2017 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 AC028_RS05675 ead7f3bc964622d48e06f22f0105d09c 431 Gene3D G3DSA:3.20.20.60 6 407 1.3E-161 T 05-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AC028_RS05675 ead7f3bc964622d48e06f22f0105d09c 431 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 248 1.7E-106 T 05-07-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AC028_RS05675 ead7f3bc964622d48e06f22f0105d09c 431 Pfam PF00463 Isocitrate lyase family 249 425 1.5E-43 T 05-07-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AC028_RS05675 ead7f3bc964622d48e06f22f0105d09c 431 Pfam PF00463 Isocitrate lyase family 13 248 1.3E-56 T 05-07-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AC028_RS05675 ead7f3bc964622d48e06f22f0105d09c 431 SUPERFAMILY SSF51621 3 425 3.05E-155 T 05-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AC028_RS05675 ead7f3bc964622d48e06f22f0105d09c 431 PIRSF PIRSF001362 1 428 4.5E-234 T 05-07-2017 AC028_RS18040 9d6f74c4a3f519356d4a0bfe17e32276 149 Gene3D G3DSA:3.10.450.50 28 144 1.9E-5 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS18040 9d6f74c4a3f519356d4a0bfe17e32276 149 SUPERFAMILY SSF54427 27 146 4.16E-12 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS02060 12497305b79f54d87c71aa543c760663 1155 Gene3D G3DSA:2.60.120.200 62 199 1.7E-12 T 05-07-2017 IPR013320 Concanavalin A-like lectin/glucanase domain AC028_RS02060 12497305b79f54d87c71aa543c760663 1155 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 334 402 2.6E-11 T 05-07-2017 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS02060 12497305b79f54d87c71aa543c760663 1155 Gene3D G3DSA:2.60.120.260 253 449 1.1E-36 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS02060 12497305b79f54d87c71aa543c760663 1155 Pfam PF00703 Glycosyl hydrolases family 2 474 578 4.6E-13 T 05-07-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AC028_RS02060 12497305b79f54d87c71aa543c760663 1155 SUPERFAMILY SSF49303 467 578 8.99E-22 T 05-07-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AC028_RS02060 12497305b79f54d87c71aa543c760663 1155 SUPERFAMILY SSF51445 650 948 5.31E-66 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS02060 12497305b79f54d87c71aa543c760663 1155 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 654 789 9.3E-7 T 05-07-2017 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS02060 12497305b79f54d87c71aa543c760663 1155 SUPERFAMILY SSF49899 56 201 2.96E-16 T 05-07-2017 IPR013320 Concanavalin A-like lectin/glucanase domain AC028_RS02060 12497305b79f54d87c71aa543c760663 1155 Gene3D G3DSA:3.20.20.80 653 794 1.8E-37 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS02060 12497305b79f54d87c71aa543c760663 1155 Gene3D G3DSA:3.20.20.80 843 947 1.8E-37 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS02060 12497305b79f54d87c71aa543c760663 1155 SUPERFAMILY SSF49785 267 461 1.46E-41 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS02060 12497305b79f54d87c71aa543c760663 1155 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 52 194 4.4E-15 T 05-07-2017 AC028_RS02060 12497305b79f54d87c71aa543c760663 1155 SUPERFAMILY SSF49303 1037 1145 1.22E-27 T 05-07-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AC028_RS02060 12497305b79f54d87c71aa543c760663 1155 SUPERFAMILY SSF49303 952 1050 1.8E-22 T 05-07-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AC028_RS02060 12497305b79f54d87c71aa543c760663 1155 Gene3D G3DSA:2.60.40.320 450 579 5.9E-17 T 05-07-2017 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 AC028_RS09155 5ee1d67f6b5499611d8bff3d914e5752 306 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 22 283 54.145 T 05-07-2017 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 Reactome: R-HSA-6782315 AC028_RS09155 5ee1d67f6b5499611d8bff3d914e5752 306 Pfam PF01171 PP-loop family 53 217 5.9E-16 T 05-07-2017 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AC028_RS09155 5ee1d67f6b5499611d8bff3d914e5752 306 PIRSF PIRSF004976 12 286 2.3E-69 T 05-07-2017 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 Reactome: R-HSA-6782315 AC028_RS09155 5ee1d67f6b5499611d8bff3d914e5752 306 SUPERFAMILY SSF52402 40 268 6.56E-53 T 05-07-2017 AC028_RS09155 5ee1d67f6b5499611d8bff3d914e5752 306 Gene3D G3DSA:3.40.50.620 35 219 4.3E-21 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS13935 da17c13b1b49143c36fac5ea16baf6fa 388 Pfam PF12412 Protein of unknown function (DUF3667) 54 97 2.0E-15 T 05-07-2017 IPR022134 Protein of unknown function DUF3667 AC028_RS00860 00623e00f8186b21b372b3e57fbff12b 460 Gene3D G3DSA:3.30.1330.90 11 159 2.8E-54 T 05-07-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AC028_RS00860 00623e00f8186b21b372b3e57fbff12b 460 Pfam PF03315 Serine dehydratase beta chain 4 158 1.6E-58 T 05-07-2017 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AC028_RS00860 00623e00f8186b21b372b3e57fbff12b 460 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 457 2.3E-217 T 05-07-2017 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AC028_RS00860 00623e00f8186b21b372b3e57fbff12b 460 Pfam PF03313 Serine dehydratase alpha chain 189 454 1.5E-106 T 05-07-2017 IPR005130 Serine dehydratase-like, alpha subunit AC028_RS00860 00623e00f8186b21b372b3e57fbff12b 460 SUPERFAMILY SSF143548 17 158 3.4E-44 T 05-07-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AC028_RS20070 18c203b7cb0632eede366d245c086c85 360 Gene3D G3DSA:1.10.443.10 164 358 4.3E-37 T 05-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AC028_RS20070 18c203b7cb0632eede366d245c086c85 360 Pfam PF00589 Phage integrase family 201 351 6.0E-24 T 05-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AC028_RS20070 18c203b7cb0632eede366d245c086c85 360 Gene3D G3DSA:1.10.150.130 60 159 5.0E-7 T 05-07-2017 IPR023109 Integrase/recombinase, N-terminal AC028_RS20070 18c203b7cb0632eede366d245c086c85 360 SUPERFAMILY SSF56349 60 357 8.83E-54 T 05-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AC028_RS15430 7f9938a7668747ec7d38b5d6b9bce59f 448 SUPERFAMILY SSF50156 89 174 2.23E-10 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS15430 7f9938a7668747ec7d38b5d6b9bce59f 448 Gene3D G3DSA:2.30.42.10 223 294 1.8E-14 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS15430 7f9938a7668747ec7d38b5d6b9bce59f 448 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 12 445 1.1E-101 T 05-07-2017 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 AC028_RS15430 7f9938a7668747ec7d38b5d6b9bce59f 448 Gene3D G3DSA:2.30.42.10 95 180 2.0E-11 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS15430 7f9938a7668747ec7d38b5d6b9bce59f 448 SMART SM00228 211 279 1.2E-4 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS15430 7f9938a7668747ec7d38b5d6b9bce59f 448 SMART SM00228 107 185 2.9 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS15430 7f9938a7668747ec7d38b5d6b9bce59f 448 Pfam PF02163 Peptidase family M50 11 432 2.5E-78 T 05-07-2017 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033 AC028_RS15430 7f9938a7668747ec7d38b5d6b9bce59f 448 SUPERFAMILY SSF50156 222 306 5.92E-14 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS05525 b1fbb205cc16d0c7703030fa305def6b 300 PRINTS PR00412 Epoxide hydrolase signature 110 123 2.2E-5 T 05-07-2017 IPR000639 Epoxide hydrolase-like GO:0003824 AC028_RS05525 b1fbb205cc16d0c7703030fa305def6b 300 PRINTS PR00412 Epoxide hydrolase signature 272 294 2.2E-5 T 05-07-2017 IPR000639 Epoxide hydrolase-like GO:0003824 AC028_RS05525 b1fbb205cc16d0c7703030fa305def6b 300 PRINTS PR00412 Epoxide hydrolase signature 38 56 2.2E-5 T 05-07-2017 IPR000639 Epoxide hydrolase-like GO:0003824 AC028_RS05525 b1fbb205cc16d0c7703030fa305def6b 300 SUPERFAMILY SSF53474 4 297 2.57E-61 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS05525 b1fbb205cc16d0c7703030fa305def6b 300 Gene3D G3DSA:3.40.50.1820 6 297 4.1E-67 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS05525 b1fbb205cc16d0c7703030fa305def6b 300 Pfam PF00561 alpha/beta hydrolase fold 33 282 1.5E-23 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS15580 3313d007577b14e0907f922432ab0698 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 289 6.3E-15 T 05-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_RS15580 3313d007577b14e0907f922432ab0698 397 Gene3D G3DSA:2.40.50.100 214 247 3.1E-18 T 05-07-2017 AC028_RS15580 3313d007577b14e0907f922432ab0698 397 Gene3D G3DSA:2.40.50.100 59 93 3.1E-18 T 05-07-2017 AC028_RS15580 3313d007577b14e0907f922432ab0698 397 Pfam PF00529 HlyD membrane-fusion protein of T1SS 35 344 7.5E-10 T 05-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AC028_RS15580 3313d007577b14e0907f922432ab0698 397 SUPERFAMILY SSF111369 59 113 7.72E-9 T 05-07-2017 AC028_RS15580 3313d007577b14e0907f922432ab0698 397 SUPERFAMILY SSF111369 165 267 8.11E-11 T 05-07-2017 AC028_RS09215 66b1823514edac99f340751f29c4587c 129 PRINTS PR00311 Bleomycin resistance protein signature 10 27 4.7E-7 T 05-07-2017 IPR000335 Bleomycin resistance protein GO:0008144|GO:0046677 AC028_RS09215 66b1823514edac99f340751f29c4587c 129 PRINTS PR00311 Bleomycin resistance protein signature 42 53 4.7E-7 T 05-07-2017 IPR000335 Bleomycin resistance protein GO:0008144|GO:0046677 AC028_RS09215 66b1823514edac99f340751f29c4587c 129 Gene3D G3DSA:3.10.180.10 10 126 8.6E-34 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS09215 66b1823514edac99f340751f29c4587c 129 SUPERFAMILY SSF54593 12 124 4.23E-23 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS18085 ba989c3cdd99ab5d60b8c6bbee897506 286 Pfam PF03705 CheR methyltransferase, all-alpha domain 21 70 4.6E-18 T 05-07-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AC028_RS18085 ba989c3cdd99ab5d60b8c6bbee897506 286 PRINTS PR00996 Glutamate methyltransferase family signature 80 92 1.2E-38 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS18085 ba989c3cdd99ab5d60b8c6bbee897506 286 PRINTS PR00996 Glutamate methyltransferase family signature 115 135 1.2E-38 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS18085 ba989c3cdd99ab5d60b8c6bbee897506 286 PRINTS PR00996 Glutamate methyltransferase family signature 240 263 1.2E-38 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS18085 ba989c3cdd99ab5d60b8c6bbee897506 286 PRINTS PR00996 Glutamate methyltransferase family signature 221 235 1.2E-38 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS18085 ba989c3cdd99ab5d60b8c6bbee897506 286 PRINTS PR00996 Glutamate methyltransferase family signature 41 54 1.2E-38 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS18085 ba989c3cdd99ab5d60b8c6bbee897506 286 PRINTS PR00996 Glutamate methyltransferase family signature 149 165 1.2E-38 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS18085 ba989c3cdd99ab5d60b8c6bbee897506 286 SUPERFAMILY SSF53335 87 278 1.6E-48 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS18085 ba989c3cdd99ab5d60b8c6bbee897506 286 Gene3D G3DSA:1.10.155.10 11 85 1.2E-31 T 05-07-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AC028_RS18085 ba989c3cdd99ab5d60b8c6bbee897506 286 SUPERFAMILY SSF47757 11 86 1.44E-23 T 05-07-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AC028_RS18085 ba989c3cdd99ab5d60b8c6bbee897506 286 Gene3D G3DSA:3.40.50.150 86 278 1.2E-60 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS18085 ba989c3cdd99ab5d60b8c6bbee897506 286 SMART SM00138 19 281 7.7E-87 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS18085 ba989c3cdd99ab5d60b8c6bbee897506 286 Pfam PF01739 CheR methyltransferase, SAM binding domain 87 271 1.0E-48 T 05-07-2017 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AC028_RS18085 ba989c3cdd99ab5d60b8c6bbee897506 286 PIRSF PIRSF000410 1 282 4.6E-89 T 05-07-2017 IPR026024 Chemotaxis protein methyltransferase CheR AC028_RS01785 47bf41bde0cec93f4209311d824a54a7 825 Pfam PF01011 PQQ enzyme repeat 245 279 2.6E-5 T 05-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat AC028_RS01785 47bf41bde0cec93f4209311d824a54a7 825 SMART SM00564 239 270 0.0076 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS01785 47bf41bde0cec93f4209311d824a54a7 825 SMART SM00564 353 396 1.9 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS01785 47bf41bde0cec93f4209311d824a54a7 825 SMART SM00564 424 474 2.2 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS01785 47bf41bde0cec93f4209311d824a54a7 825 SMART SM00564 739 772 5.0 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS01785 47bf41bde0cec93f4209311d824a54a7 825 SMART SM00564 496 529 730.0 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS01785 47bf41bde0cec93f4209311d824a54a7 825 Gene3D G3DSA:2.140.10.10 179 550 1.0E-143 T 05-07-2017 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AC028_RS01785 47bf41bde0cec93f4209311d824a54a7 825 Gene3D G3DSA:2.140.10.10 592 820 1.0E-143 T 05-07-2017 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AC028_RS01785 47bf41bde0cec93f4209311d824a54a7 825 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 17 816 0.0 T 05-07-2017 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 AC028_RS01785 47bf41bde0cec93f4209311d824a54a7 825 Pfam PF13360 PQQ-like domain 378 525 1.8E-6 T 05-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat AC028_RS01785 47bf41bde0cec93f4209311d824a54a7 825 Pfam PF13360 PQQ-like domain 694 798 7.5E-6 T 05-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat AC028_RS01785 47bf41bde0cec93f4209311d824a54a7 825 SUPERFAMILY SSF50998 581 817 1.96E-143 T 05-07-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AC028_RS01785 47bf41bde0cec93f4209311d824a54a7 825 SUPERFAMILY SSF50998 180 538 1.96E-143 T 05-07-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AC028_RS21010 efd3d7c7b662ab4685ad532735758d01 504 Gene3D G3DSA:2.60.120.260 372 486 1.4E-5 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS21010 efd3d7c7b662ab4685ad532735758d01 504 Gene3D G3DSA:2.115.10.20 13 310 3.7E-64 T 05-07-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AC028_RS21010 efd3d7c7b662ab4685ad532735758d01 504 SUPERFAMILY SSF75005 14 322 4.43E-58 T 05-07-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AC028_RS21010 efd3d7c7b662ab4685ad532735758d01 504 Pfam PF04616 Glycosyl hydrolases family 43 22 310 1.2E-39 T 05-07-2017 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AC028_RS03700 fa12a8de843352dc7468f21fed218002 457 Pfam PF06057 Bacterial virulence protein (VirJ) 266 453 6.3E-84 T 05-07-2017 IPR010333 Bacterial virulence AC028_RS03700 fa12a8de843352dc7468f21fed218002 457 SUPERFAMILY SSF53474 31 158 1.68E-6 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS03700 fa12a8de843352dc7468f21fed218002 457 PIRSF PIRSF029063 1 457 2.6E-178 T 05-07-2017 IPR011225 Type IV secretory pathway, VirJ component AC028_RS03700 fa12a8de843352dc7468f21fed218002 457 Gene3D G3DSA:3.40.50.1820 45 211 4.3E-6 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS03700 fa12a8de843352dc7468f21fed218002 457 Gene3D G3DSA:3.40.50.1820 268 449 1.8E-10 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS03700 fa12a8de843352dc7468f21fed218002 457 SUPERFAMILY SSF53474 260 454 7.46E-22 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS14845 9bc54560c1b98837b068a8b1adc212e5 127 Pfam PF04138 GtrA-like protein 9 126 7.0E-16 T 05-07-2017 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 AC028_RS11350 2403805bc9ddaf67fbd10ab36cdb5d7d 743 Pfam PF07793 Protein of unknown function (DUF1631) 11 735 7.5E-158 T 05-07-2017 IPR012434 Protein of unknown function DUF1631 AC028_RS08085 6d267f25d0b7bfe15e43d8a276ac1c7a 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.4E-14 T 05-07-2017 AC028_RS08085 6d267f25d0b7bfe15e43d8a276ac1c7a 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 7.4E-14 T 05-07-2017 AC028_RS08085 6d267f25d0b7bfe15e43d8a276ac1c7a 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.4E-14 T 05-07-2017 AC028_RS08085 6d267f25d0b7bfe15e43d8a276ac1c7a 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 4.5E-5 T 05-07-2017 AC028_RS08085 6d267f25d0b7bfe15e43d8a276ac1c7a 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 4.5E-5 T 05-07-2017 AC028_RS08085 6d267f25d0b7bfe15e43d8a276ac1c7a 192 Pfam PF00117 Glutamine amidotransferase class-I 4 190 1.0E-54 T 05-07-2017 IPR017926 Glutamine amidotransferase AC028_RS08085 6d267f25d0b7bfe15e43d8a276ac1c7a 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 4.5E-79 T 05-07-2017 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AC028_RS08085 6d267f25d0b7bfe15e43d8a276ac1c7a 192 Gene3D G3DSA:3.40.50.880 2 191 1.5E-66 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS08085 6d267f25d0b7bfe15e43d8a276ac1c7a 192 SUPERFAMILY SSF52317 1 191 1.53E-54 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS08085 6d267f25d0b7bfe15e43d8a276ac1c7a 192 PRINTS PR00097 Anthranilate synthase component II signature 2 16 4.0E-36 T 05-07-2017 AC028_RS08085 6d267f25d0b7bfe15e43d8a276ac1c7a 192 PRINTS PR00097 Anthranilate synthase component II signature 169 182 4.0E-36 T 05-07-2017 AC028_RS08085 6d267f25d0b7bfe15e43d8a276ac1c7a 192 PRINTS PR00097 Anthranilate synthase component II signature 47 56 4.0E-36 T 05-07-2017 AC028_RS08085 6d267f25d0b7bfe15e43d8a276ac1c7a 192 PRINTS PR00097 Anthranilate synthase component II signature 119 131 4.0E-36 T 05-07-2017 AC028_RS08085 6d267f25d0b7bfe15e43d8a276ac1c7a 192 PRINTS PR00097 Anthranilate synthase component II signature 99 107 4.0E-36 T 05-07-2017 AC028_RS08085 6d267f25d0b7bfe15e43d8a276ac1c7a 192 PRINTS PR00097 Anthranilate synthase component II signature 74 85 4.0E-36 T 05-07-2017 AC028_RS19690 6ae16f2b9761f2abba7a392f8f3e5775 485 SMART SM00116 96 143 2.7E-11 T 05-07-2017 IPR000644 CBS domain AC028_RS19690 6ae16f2b9761f2abba7a392f8f3e5775 485 SMART SM00116 157 205 1.6E-7 T 05-07-2017 IPR000644 CBS domain AC028_RS19690 6ae16f2b9761f2abba7a392f8f3e5775 485 Gene3D G3DSA:3.20.20.70 2 483 2.2E-198 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS19690 6ae16f2b9761f2abba7a392f8f3e5775 485 Pfam PF00571 CBS domain 148 200 5.5E-6 T 05-07-2017 IPR000644 CBS domain AC028_RS19690 6ae16f2b9761f2abba7a392f8f3e5775 485 Pfam PF00571 CBS domain 95 139 5.4E-11 T 05-07-2017 IPR000644 CBS domain AC028_RS19690 6ae16f2b9761f2abba7a392f8f3e5775 485 SUPERFAMILY SSF51412 216 475 2.35E-124 T 05-07-2017 AC028_RS19690 6ae16f2b9761f2abba7a392f8f3e5775 485 SUPERFAMILY SSF51412 2 90 2.35E-124 T 05-07-2017 AC028_RS19690 6ae16f2b9761f2abba7a392f8f3e5775 485 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 452 5.0E-188 T 05-07-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AC028_RS19690 6ae16f2b9761f2abba7a392f8f3e5775 485 PIRSF PIRSF000130 1 485 1.6E-201 T 05-07-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AC028_RS19690 6ae16f2b9761f2abba7a392f8f3e5775 485 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 484 82.082 T 05-07-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AC028_RS19690 6ae16f2b9761f2abba7a392f8f3e5775 485 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 05-07-2017 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AC028_RS19690 6ae16f2b9761f2abba7a392f8f3e5775 485 SMART SM01240 7 471 0.0 T 05-07-2017 AC028_RS19690 6ae16f2b9761f2abba7a392f8f3e5775 485 SUPERFAMILY SSF54631 94 202 8.97E-28 T 05-07-2017 AC028_RS19690 6ae16f2b9761f2abba7a392f8f3e5775 485 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 471 4.9E-157 T 05-07-2017 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AC028_RS12935 b0751c8fffdd0ac25b159c563883448e 251 SUPERFAMILY SSF55729 83 242 2.12E-21 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS12935 b0751c8fffdd0ac25b159c563883448e 251 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 19 89 4.9E-17 T 05-07-2017 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 AC028_RS12935 b0751c8fffdd0ac25b159c563883448e 251 PIRSF PIRSF037208 3 250 4.8E-87 T 05-07-2017 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic AC028_RS12935 b0751c8fffdd0ac25b159c563883448e 251 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 109 235 1.7E-33 T 05-07-2017 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 AC028_RS12935 b0751c8fffdd0ac25b159c563883448e 251 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 4 245 40.686 T 05-07-2017 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic AC028_RS03530 cfce1f916263417e11cea81f3b7fc59d 369 SUPERFAMILY SSF51395 6 355 5.76E-95 T 05-07-2017 AC028_RS03530 cfce1f916263417e11cea81f3b7fc59d 369 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 354 1.6E-68 T 05-07-2017 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AC028_RS03530 cfce1f916263417e11cea81f3b7fc59d 369 Gene3D G3DSA:3.20.20.70 7 355 8.5E-101 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS09965 60924c93fe763121bdf48fb39f644fad 244 Gene3D G3DSA:1.10.760.10 138 239 1.9E-21 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS09965 60924c93fe763121bdf48fb39f644fad 244 SUPERFAMILY SSF46626 123 237 4.45E-18 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS09965 60924c93fe763121bdf48fb39f644fad 244 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 144 233 1.0E-9 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS07765 f574e0d4ba4233e20da03c398a464045 264 PIRSF PIRSF029288 1 264 6.0E-99 T 05-07-2017 IPR009211 Predicted virulence protein, SciE type AC028_RS07765 f574e0d4ba4233e20da03c398a464045 264 Pfam PF07024 ImpE protein 140 259 7.2E-39 T 05-07-2017 IPR009211 Predicted virulence protein, SciE type AC028_RS07765 f574e0d4ba4233e20da03c398a464045 264 SUPERFAMILY SSF144059 4 263 1.27E-85 T 05-07-2017 AC028_RS07765 f574e0d4ba4233e20da03c398a464045 264 Gene3D G3DSA:1.25.40.10 5 61 1.8E-6 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS07765 f574e0d4ba4233e20da03c398a464045 264 Gene3D G3DSA:1.25.40.10 97 137 1.8E-6 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS13055 6554a06dd7efda5e99b84f648819aeff 666 Gene3D G3DSA:1.20.210.10 38 589 3.5E-194 T 05-07-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13055 6554a06dd7efda5e99b84f648819aeff 666 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 05-07-2017 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13055 6554a06dd7efda5e99b84f648819aeff 666 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 504 3.6E-140 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13055 6554a06dd7efda5e99b84f648819aeff 666 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 05-07-2017 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 AC028_RS13055 6554a06dd7efda5e99b84f648819aeff 666 SUPERFAMILY SSF81442 43 559 3.79E-182 T 05-07-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13055 6554a06dd7efda5e99b84f648819aeff 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 1.5E-98 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13055 6554a06dd7efda5e99b84f648819aeff 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 1.5E-98 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13055 6554a06dd7efda5e99b84f648819aeff 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 1.5E-98 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13055 6554a06dd7efda5e99b84f648819aeff 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 1.5E-98 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13055 6554a06dd7efda5e99b84f648819aeff 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 1.5E-98 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13055 6554a06dd7efda5e99b84f648819aeff 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 1.5E-98 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13055 6554a06dd7efda5e99b84f648819aeff 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 1.5E-98 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13055 6554a06dd7efda5e99b84f648819aeff 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 1.5E-98 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13055 6554a06dd7efda5e99b84f648819aeff 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 1.5E-98 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13055 6554a06dd7efda5e99b84f648819aeff 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 1.5E-98 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13055 6554a06dd7efda5e99b84f648819aeff 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 1.5E-98 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13055 6554a06dd7efda5e99b84f648819aeff 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 1.5E-98 T 05-07-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS12805 e2ecb4b252b564610053119edf97c242 954 SUPERFAMILY SSF53383 471 878 7.98E-103 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS12805 e2ecb4b252b564610053119edf97c242 954 SUPERFAMILY SSF53383 921 943 7.98E-103 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS12805 e2ecb4b252b564610053119edf97c242 954 Pfam PF02347 Glycine cleavage system P-protein 19 440 1.7E-175 T 05-07-2017 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AC028_RS12805 e2ecb4b252b564610053119edf97c242 954 Pfam PF02347 Glycine cleavage system P-protein 446 731 5.0E-13 T 05-07-2017 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AC028_RS12805 e2ecb4b252b564610053119edf97c242 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 11 948 25.688 T 05-07-2017 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AC028_RS12805 e2ecb4b252b564610053119edf97c242 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 20 942 0.0 T 05-07-2017 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AC028_RS12805 e2ecb4b252b564610053119edf97c242 954 SUPERFAMILY SSF53383 20 438 5.14E-101 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS12805 e2ecb4b252b564610053119edf97c242 954 Gene3D G3DSA:3.40.640.10 90 306 1.8E-13 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS12805 e2ecb4b252b564610053119edf97c242 954 Gene3D G3DSA:3.40.640.10 497 736 6.8E-41 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS16355 1a8acc246cc0a933bd8b17c0419bf3ba 185 ProSitePatterns PS00460 Glutathione peroxidases active site. 48 63 - T 05-07-2017 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AC028_RS16355 1a8acc246cc0a933bd8b17c0419bf3ba 185 PIRSF PIRSF000303 2 184 2.3E-55 T 05-07-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AC028_RS16355 1a8acc246cc0a933bd8b17c0419bf3ba 185 Pfam PF00255 Glutathione peroxidase 32 134 2.6E-31 T 05-07-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AC028_RS16355 1a8acc246cc0a933bd8b17c0419bf3ba 185 Gene3D G3DSA:3.40.30.10 27 181 3.4E-52 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS16355 1a8acc246cc0a933bd8b17c0419bf3ba 185 SUPERFAMILY SSF52833 25 180 1.78E-48 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS16355 1a8acc246cc0a933bd8b17c0419bf3ba 185 PRINTS PR01011 Glutathione peroxidase family signature 81 97 1.5E-14 T 05-07-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AC028_RS16355 1a8acc246cc0a933bd8b17c0419bf3ba 185 PRINTS PR01011 Glutathione peroxidase family signature 142 151 1.5E-14 T 05-07-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AC028_RS16355 1a8acc246cc0a933bd8b17c0419bf3ba 185 PRINTS PR01011 Glutathione peroxidase family signature 46 63 1.5E-14 T 05-07-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AC028_RS07355 9ebe927898217583815bb316bc862e17 604 Gene3D G3DSA:3.30.450.90 210 324 4.9E-46 T 05-07-2017 AC028_RS07355 9ebe927898217583815bb316bc862e17 604 SUPERFAMILY SSF160246 81 169 7.85E-13 T 05-07-2017 AC028_RS07355 9ebe927898217583815bb316bc862e17 604 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 419 433 - T 05-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AC028_RS07355 9ebe927898217583815bb316bc862e17 604 SUPERFAMILY SSF52540 213 599 2.46E-95 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07355 9ebe927898217583815bb316bc862e17 604 SMART SM00382 352 473 4.6E-6 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS07355 9ebe927898217583815bb316bc862e17 604 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 80 174 8.2E-15 T 05-07-2017 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 AC028_RS07355 9ebe927898217583815bb316bc862e17 604 Pfam PF00437 Type II/IV secretion system protein 231 491 1.0E-72 T 05-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AC028_RS07355 9ebe927898217583815bb316bc862e17 604 Gene3D G3DSA:3.40.50.300 330 600 3.2E-93 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS21575 20f30aa2cfb074ad3507a928a7d03a59 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 96 8.6E-23 T 05-07-2017 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AC028_RS21575 20f30aa2cfb074ad3507a928a7d03a59 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 19.628 T 05-07-2017 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AC028_RS21945 5fa4091ba71bde4fb5997920aec06902 291 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 80 96 - T 05-07-2017 IPR000092 Polyprenyl synthetase GO:0008299 AC028_RS21945 5fa4091ba71bde4fb5997920aec06902 291 Pfam PF00348 Polyprenyl synthetase 29 257 1.5E-56 T 05-07-2017 IPR000092 Polyprenyl synthetase GO:0008299 AC028_RS21945 5fa4091ba71bde4fb5997920aec06902 291 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 210 222 - T 05-07-2017 IPR000092 Polyprenyl synthetase GO:0008299 AC028_RS21945 5fa4091ba71bde4fb5997920aec06902 291 SUPERFAMILY SSF48576 6 277 1.18E-83 T 05-07-2017 IPR008949 Isoprenoid synthase domain AC028_RS21945 5fa4091ba71bde4fb5997920aec06902 291 Gene3D G3DSA:1.10.600.10 6 273 5.8E-90 T 05-07-2017 IPR008949 Isoprenoid synthase domain AC028_RS08075 95bae8ff91aaf7409be6a8beb0941714 491 Pfam PF00425 chorismate binding enzyme 223 476 4.2E-97 T 05-07-2017 IPR015890 Chorismate-utilising enzyme, C-terminal AC028_RS08075 95bae8ff91aaf7409be6a8beb0941714 491 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 170 2.0E-29 T 05-07-2017 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AC028_RS08075 95bae8ff91aaf7409be6a8beb0941714 491 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 27 484 1.4E-165 T 05-07-2017 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AC028_RS08075 95bae8ff91aaf7409be6a8beb0941714 491 PRINTS PR00095 Anthranilate synthase component I signature 433 447 1.4E-22 T 05-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AC028_RS08075 95bae8ff91aaf7409be6a8beb0941714 491 PRINTS PR00095 Anthranilate synthase component I signature 338 351 1.4E-22 T 05-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AC028_RS08075 95bae8ff91aaf7409be6a8beb0941714 491 PRINTS PR00095 Anthranilate synthase component I signature 324 337 1.4E-22 T 05-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AC028_RS08075 95bae8ff91aaf7409be6a8beb0941714 491 PRINTS PR00095 Anthranilate synthase component I signature 418 432 1.4E-22 T 05-07-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AC028_RS08075 95bae8ff91aaf7409be6a8beb0941714 491 Gene3D G3DSA:3.60.120.10 14 487 4.2E-173 T 05-07-2017 IPR005801 ADC synthase GO:0009058 AC028_RS08075 95bae8ff91aaf7409be6a8beb0941714 491 SUPERFAMILY SSF56322 16 484 1.44E-155 T 05-07-2017 IPR005801 ADC synthase GO:0009058 AC028_RS20570 785ccf71e4306e0093ca9724279340a6 484 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 36 478 73.127 T 05-07-2017 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AC028_RS20570 785ccf71e4306e0093ca9724279340a6 484 Pfam PF01938 TRAM domain 416 477 1.0E-19 T 05-07-2017 IPR002792 TRAM domain AC028_RS20570 785ccf71e4306e0093ca9724279340a6 484 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 37 477 2.1E-179 T 05-07-2017 AC028_RS20570 785ccf71e4306e0093ca9724279340a6 484 SMART SM00729 180 405 1.1E-57 T 05-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AC028_RS20570 785ccf71e4306e0093ca9724279340a6 484 Pfam PF00919 Uncharacterized protein family UPF0004 37 137 9.4E-30 T 05-07-2017 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 AC028_RS20570 785ccf71e4306e0093ca9724279340a6 484 Gene3D G3DSA:3.80.30.20 179 417 4.7E-75 T 05-07-2017 IPR023404 Radical SAM, alpha/beta horseshoe AC028_RS20570 785ccf71e4306e0093ca9724279340a6 484 Pfam PF04055 Radical SAM superfamily 184 363 1.8E-27 T 05-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AC028_RS20570 785ccf71e4306e0093ca9724279340a6 484 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 37 475 3.6E-147 T 05-07-2017 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 AC028_RS20570 785ccf71e4306e0093ca9724279340a6 484 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 184 204 - T 05-07-2017 IPR020612 Methylthiotransferase, conserved site GO:0051539 AC028_RS20570 785ccf71e4306e0093ca9724279340a6 484 SUPERFAMILY SSF102114 162 409 1.83E-58 T 05-07-2017 AC028_RS08955 f2a4e349ed37581dcb076df121d59e12 319 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 2 263 30.225 T 05-07-2017 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AC028_RS08955 f2a4e349ed37581dcb076df121d59e12 319 Gene3D G3DSA:2.40.290.10 6 154 9.6E-8 T 05-07-2017 IPR016194 SPOC-like, C-terminal domain AC028_RS08955 f2a4e349ed37581dcb076df121d59e12 319 SUPERFAMILY SSF100939 2 265 7.85E-44 T 05-07-2017 IPR016194 SPOC-like, C-terminal domain AC028_RS08955 f2a4e349ed37581dcb076df121d59e12 319 Pfam PF02735 Ku70/Ku80 beta-barrel domain 12 178 1.2E-29 T 05-07-2017 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571 AC028_RS08955 f2a4e349ed37581dcb076df121d59e12 319 PIRSF PIRSF006493 1 314 3.3E-84 T 05-07-2017 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AC028_RS08955 f2a4e349ed37581dcb076df121d59e12 319 TIGRFAM TIGR02772 Ku_bact: Ku protein 2 265 4.0E-99 T 05-07-2017 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AC028_RS08955 f2a4e349ed37581dcb076df121d59e12 319 SMART SM00559 53 182 1.9E-20 T 05-07-2017 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571 AC028_RS20190 905a4bb73a7fdd02db0dc3559ebf66d3 469 Gene3D G3DSA:1.10.220.70 56 141 9.1E-41 T 05-07-2017 AC028_RS20190 905a4bb73a7fdd02db0dc3559ebf66d3 469 Gene3D G3DSA:3.20.20.70 143 442 5.8E-164 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS20190 905a4bb73a7fdd02db0dc3559ebf66d3 469 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 13 440 4.7E-221 T 05-07-2017 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AC028_RS20190 905a4bb73a7fdd02db0dc3559ebf66d3 469 Gene3D G3DSA:2.30.170.30 4 55 1.2E-22 T 05-07-2017 AC028_RS20190 905a4bb73a7fdd02db0dc3559ebf66d3 469 PIRSF PIRSF018788 2 461 5.4E-241 T 05-07-2017 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AC028_RS21525 e7249a8de4e808c11e1fcaf781feddac 86 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 7 85 2.0E-39 T 05-07-2017 AC028_RS21525 e7249a8de4e808c11e1fcaf781feddac 86 Gene3D G3DSA:1.10.287.10 4 86 9.1E-38 T 05-07-2017 IPR009068 S15/NS1, RNA-binding AC028_RS21525 e7249a8de4e808c11e1fcaf781feddac 86 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 86 1.4E-37 T 05-07-2017 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS21525 e7249a8de4e808c11e1fcaf781feddac 86 ProSitePatterns PS00362 Ribosomal protein S15 signature. 36 66 - T 05-07-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS21525 e7249a8de4e808c11e1fcaf781feddac 86 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 86 21.612 T 05-07-2017 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS21525 e7249a8de4e808c11e1fcaf781feddac 86 SUPERFAMILY SSF47060 4 86 2.85E-34 T 05-07-2017 IPR009068 S15/NS1, RNA-binding AC028_RS21525 e7249a8de4e808c11e1fcaf781feddac 86 Pfam PF00312 Ribosomal protein S15 6 85 2.6E-37 T 05-07-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS21525 e7249a8de4e808c11e1fcaf781feddac 86 SMART SM01387 5 85 4.7E-50 T 05-07-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS13520 09e141551948b6294aa990681921a02c 219 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 219 31.353 T 05-07-2017 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AC028_RS13520 09e141551948b6294aa990681921a02c 219 SUPERFAMILY SSF53271 5 211 1.15E-43 T 05-07-2017 IPR029057 Phosphoribosyltransferase-like AC028_RS13520 09e141551948b6294aa990681921a02c 219 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 188 8.4E-57 T 05-07-2017 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AC028_RS13520 09e141551948b6294aa990681921a02c 219 Gene3D G3DSA:3.40.50.2020 7 214 1.2E-74 T 05-07-2017 IPR029057 Phosphoribosyltransferase-like AC028_RS13520 09e141551948b6294aa990681921a02c 219 Pfam PF00156 Phosphoribosyl transferase domain 48 158 5.2E-15 T 05-07-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 AC028_RS12140 03ae5a00fc30641c6f5dd3666ce03c91 234 Pfam PF13672 Protein phosphatase 2C 17 193 2.0E-13 T 05-07-2017 AC028_RS12140 03ae5a00fc30641c6f5dd3666ce03c91 234 SMART SM00331 8 233 4.0E-28 T 05-07-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AC028_RS12140 03ae5a00fc30641c6f5dd3666ce03c91 234 SUPERFAMILY SSF81606 2 232 3.4E-62 T 05-07-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AC028_RS12140 03ae5a00fc30641c6f5dd3666ce03c91 234 SMART SM00332 3 231 2.6E-18 T 05-07-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AC028_RS12140 03ae5a00fc30641c6f5dd3666ce03c91 234 Gene3D G3DSA:3.60.40.10 2 232 9.3E-63 T 05-07-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AC028_RS18140 78f2a96369dea590c2120eee36b4ed3b 654 SMART SM00283 393 640 4.2E-92 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18140 78f2a96369dea590c2120eee36b4ed3b 654 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 458 639 9.7E-62 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18140 78f2a96369dea590c2120eee36b4ed3b 654 Pfam PF00672 HAMP domain 141 208 9.9E-12 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18140 78f2a96369dea590c2120eee36b4ed3b 654 Gene3D G3DSA:1.10.287.950 408 612 2.3E-61 T 05-07-2017 AC028_RS18140 78f2a96369dea590c2120eee36b4ed3b 654 SUPERFAMILY SSF58104 360 644 2.22E-72 T 05-07-2017 AC028_RS18140 78f2a96369dea590c2120eee36b4ed3b 654 SUPERFAMILY SSF158472 160 209 4.71E-6 T 05-07-2017 AC028_RS18140 78f2a96369dea590c2120eee36b4ed3b 654 SMART SM00304 340 392 14.0 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS18140 78f2a96369dea590c2120eee36b4ed3b 654 SMART SM00304 159 211 2.2E-6 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS15500 e103dba021fa9837fa021a1e702cc87d 183 SMART SM00972 120 180 2.1E-21 T 05-07-2017 IPR007893 Spore coat protein U AC028_RS15500 e103dba021fa9837fa021a1e702cc87d 183 Pfam PF05229 Spore Coat Protein U domain 34 180 3.8E-34 T 05-07-2017 IPR007893 Spore coat protein U AC028_RS20830 def01682fdd6b5d66539858c236e3fb2 575 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 120 203 2.9E-38 T 05-07-2017 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 AC028_RS20830 def01682fdd6b5d66539858c236e3fb2 575 SUPERFAMILY SSF52794 118 217 2.79E-36 T 05-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AC028_RS20830 def01682fdd6b5d66539858c236e3fb2 575 Gene3D G3DSA:3.40.50.2300 5 102 9.0E-14 T 05-07-2017 AC028_RS20830 def01682fdd6b5d66539858c236e3fb2 575 SUPERFAMILY SSF52794 5 102 1.1E-15 T 05-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AC028_RS20830 def01682fdd6b5d66539858c236e3fb2 575 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 121 211 4.6E-18 T 05-07-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AC028_RS20830 def01682fdd6b5d66539858c236e3fb2 575 Gene3D G3DSA:3.40.50.2300 114 217 2.7E-41 T 05-07-2017 AC028_RS20830 def01682fdd6b5d66539858c236e3fb2 575 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 227 567 3.6E-150 T 05-07-2017 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AC028_RS00410 c8957726a5fd6868878a071416d7b4f2 236 Pfam PF00483 Nucleotidyl transferase 2 121 3.8E-13 T 05-07-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AC028_RS00410 c8957726a5fd6868878a071416d7b4f2 236 SUPERFAMILY SSF53448 2 231 1.1E-48 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS00410 c8957726a5fd6868878a071416d7b4f2 236 Gene3D G3DSA:3.90.550.10 2 233 3.7E-44 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS18455 1fe3d78eda0e0e446ef88ad39f0dbec8 1165 Gene3D G3DSA:3.90.550.10 555 770 3.9E-27 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS18455 1fe3d78eda0e0e446ef88ad39f0dbec8 1165 SUPERFAMILY SSF53756 881 1146 6.91E-10 T 05-07-2017 AC028_RS18455 1fe3d78eda0e0e446ef88ad39f0dbec8 1165 SUPERFAMILY SSF53448 2 220 1.13E-30 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS18455 1fe3d78eda0e0e446ef88ad39f0dbec8 1165 Pfam PF00535 Glycosyl transferase family 2 568 734 4.8E-11 T 05-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AC028_RS18455 1fe3d78eda0e0e446ef88ad39f0dbec8 1165 Pfam PF00535 Glycosyl transferase family 2 1 118 4.8E-14 T 05-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AC028_RS18455 1fe3d78eda0e0e446ef88ad39f0dbec8 1165 SUPERFAMILY SSF53448 546 786 1.5E-28 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS18455 1fe3d78eda0e0e446ef88ad39f0dbec8 1165 Gene3D G3DSA:3.90.550.10 1 222 6.4E-31 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS12990 f276097f371a5a9b7c14570d5bca876f 355 PIRSF PIRSF002401 1 354 9.8E-133 T 05-07-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AC028_RS12990 f276097f371a5a9b7c14570d5bca876f 355 SUPERFAMILY SSF52540 152 345 9.42E-48 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12990 f276097f371a5a9b7c14570d5bca876f 355 Hamap MF_01454 GTPase Obg [obg]. 2 342 47.427 T 05-07-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AC028_RS12990 f276097f371a5a9b7c14570d5bca876f 355 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 9.9E-35 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS12990 f276097f371a5a9b7c14570d5bca876f 355 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 9.9E-35 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS12990 f276097f371a5a9b7c14570d5bca876f 355 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 9.9E-35 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS12990 f276097f371a5a9b7c14570d5bca876f 355 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 9.9E-35 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS12990 f276097f371a5a9b7c14570d5bca876f 355 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 05-07-2017 IPR006074 GTP1/OBG, conserved site GO:0005525 AC028_RS12990 f276097f371a5a9b7c14570d5bca876f 355 Pfam PF01018 GTP1/OBG 3 158 2.8E-60 T 05-07-2017 IPR006169 GTP1/OBG domain GO:0005525 AC028_RS12990 f276097f371a5a9b7c14570d5bca876f 355 Gene3D G3DSA:3.40.50.300 160 347 1.6E-48 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12990 f276097f371a5a9b7c14570d5bca876f 355 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 340 2.2E-136 T 05-07-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AC028_RS12990 f276097f371a5a9b7c14570d5bca876f 355 Pfam PF01926 50S ribosome-binding GTPase 161 293 2.4E-23 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS12990 f276097f371a5a9b7c14570d5bca876f 355 Gene3D G3DSA:2.70.210.12 3 156 1.3E-59 T 05-07-2017 IPR006169 GTP1/OBG domain GO:0005525 AC028_RS12990 f276097f371a5a9b7c14570d5bca876f 355 SUPERFAMILY SSF82051 3 158 8.89E-58 T 05-07-2017 IPR006169 GTP1/OBG domain GO:0005525 AC028_RS13530 9915b715108632613c2abb3a735a4887 406 SUPERFAMILY SSF103473 3 402 5.62E-35 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS13530 9915b715108632613c2abb3a735a4887 406 Gene3D G3DSA:1.20.1250.20 3 188 1.2E-14 T 05-07-2017 AC028_RS13530 9915b715108632613c2abb3a735a4887 406 Gene3D G3DSA:1.20.1250.20 219 397 5.3E-12 T 05-07-2017 AC028_RS13530 9915b715108632613c2abb3a735a4887 406 Pfam PF07690 Major Facilitator Superfamily 23 357 8.4E-22 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS10545 f119452165b81ebd7f58ccde5e590c86 238 SMART SM00448 11 121 1.2E-40 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS10545 f119452165b81ebd7f58ccde5e590c86 238 Gene3D G3DSA:3.40.50.2300 10 129 1.7E-38 T 05-07-2017 AC028_RS10545 f119452165b81ebd7f58ccde5e590c86 238 SMART SM00862 157 233 9.3E-23 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS10545 f119452165b81ebd7f58ccde5e590c86 238 Pfam PF00072 Response regulator receiver domain 13 122 4.7E-28 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS10545 f119452165b81ebd7f58ccde5e590c86 238 Gene3D G3DSA:1.10.10.10 135 233 9.8E-27 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS10545 f119452165b81ebd7f58ccde5e590c86 238 SUPERFAMILY SSF52172 9 190 1.41E-39 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS10545 f119452165b81ebd7f58ccde5e590c86 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 2.4E-21 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS21735 497a5410eb1820c545553a60473e7a48 357 Gene3D G3DSA:3.40.50.720 119 294 2.9E-62 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS21735 497a5410eb1820c545553a60473e7a48 357 SUPERFAMILY SSF52283 7 140 2.08E-31 T 05-07-2017 AC028_RS21735 497a5410eb1820c545553a60473e7a48 357 Gene3D G3DSA:3.40.50.720 8 118 1.2E-31 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS21735 497a5410eb1820c545553a60473e7a48 357 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 319 5.7E-22 T 05-07-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AC028_RS21735 497a5410eb1820c545553a60473e7a48 357 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 153 181 - T 05-07-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AC028_RS21735 497a5410eb1820c545553a60473e7a48 357 SUPERFAMILY SSF51735 105 293 2.05E-58 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS21735 497a5410eb1820c545553a60473e7a48 357 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 292 4.1E-59 T 05-07-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AC028_RS12545 389ed5656ad5e86409262367256f3d27 524 Pfam PF00069 Protein kinase domain 279 500 6.9E-12 T 05-07-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AC028_RS12545 389ed5656ad5e86409262367256f3d27 524 Gene3D G3DSA:3.30.200.20 281 362 2.7E-4 T 05-07-2017 AC028_RS12545 389ed5656ad5e86409262367256f3d27 524 Gene3D G3DSA:1.10.510.10 363 509 4.6E-10 T 05-07-2017 AC028_RS12545 389ed5656ad5e86409262367256f3d27 524 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 216 247 - T 05-07-2017 IPR017441 Protein kinase, ATP binding site GO:0005524 AC028_RS12545 389ed5656ad5e86409262367256f3d27 524 SUPERFAMILY SSF56112 280 506 4.51E-18 T 05-07-2017 IPR011009 Protein kinase-like domain AC028_RS12545 389ed5656ad5e86409262367256f3d27 524 SMART SM00220 210 500 2.4E-6 T 05-07-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AC028_RS13480 99f9b53374cda6d5de8e3c88c6588aa8 113 ProDom PD339292 LIPID A SYNTHASE LIPID-A-DISACCHARIDE TRANSFERASE GLYCOSYLTRANSFERASE BIOSYNTHESIS N-TERMINAL BIOSYNTHESIS SYNTHESIS 21 104 8.0E-42 T 05-07-2017 IPR011499 Lipid A biosynthesis GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AC028_RS13480 99f9b53374cda6d5de8e3c88c6588aa8 113 PIRSF PIRSF028440 3 113 1.9E-46 T 05-07-2017 IPR014546 Uncharacterised conserved protein, lipid A biosynthesis AC028_RS13480 99f9b53374cda6d5de8e3c88c6588aa8 113 SMART SM01259 26 99 7.4E-22 T 05-07-2017 IPR011499 Lipid A biosynthesis GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AC028_RS13480 99f9b53374cda6d5de8e3c88c6588aa8 113 Pfam PF07578 Lipid A Biosynthesis N-terminal domain 26 97 5.8E-21 T 05-07-2017 IPR011499 Lipid A biosynthesis GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AC028_RS20930 3476316eea94dbc1b3ed55da90f0e782 94 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 05-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AC028_RS20930 3476316eea94dbc1b3ed55da90f0e782 94 Pfam PF00037 4Fe-4S binding domain 5 25 5.2E-6 T 05-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AC028_RS20930 3476316eea94dbc1b3ed55da90f0e782 94 Gene3D G3DSA:3.30.70.20 6 73 2.6E-16 T 05-07-2017 AC028_RS20930 3476316eea94dbc1b3ed55da90f0e782 94 SUPERFAMILY SSF54862 6 72 2.25E-18 T 05-07-2017 AC028_RS13870 9e93f5b91056f307fd9fb2e0b762ab3e 228 Gene3D G3DSA:3.40.50.300 2 227 4.7E-69 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS13870 9e93f5b91056f307fd9fb2e0b762ab3e 228 Pfam PF00005 ABC transporter 20 167 7.0E-31 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS13870 9e93f5b91056f307fd9fb2e0b762ab3e 228 SUPERFAMILY SSF52540 3 225 4.98E-65 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS13870 9e93f5b91056f307fd9fb2e0b762ab3e 228 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS13870 9e93f5b91056f307fd9fb2e0b762ab3e 228 SMART SM00382 29 216 1.3E-6 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS13870 9e93f5b91056f307fd9fb2e0b762ab3e 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 4 216 7.0E-84 T 05-07-2017 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 AC028_RS09110 cf1cfbda82db2b8c76a1c6ac5b9ffa38 245 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 9 244 18.29 T 05-07-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AC028_RS09110 cf1cfbda82db2b8c76a1c6ac5b9ffa38 245 Pfam PF00902 Sec-independent protein translocase protein (TatC) 15 225 2.1E-64 T 05-07-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AC028_RS09110 cf1cfbda82db2b8c76a1c6ac5b9ffa38 245 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 13 230 9.7E-67 T 05-07-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AC028_RS09110 cf1cfbda82db2b8c76a1c6ac5b9ffa38 245 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 12 39 1.9E-44 T 05-07-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AC028_RS09110 cf1cfbda82db2b8c76a1c6ac5b9ffa38 245 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 89 107 1.9E-44 T 05-07-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AC028_RS09110 cf1cfbda82db2b8c76a1c6ac5b9ffa38 245 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 107 133 1.9E-44 T 05-07-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AC028_RS09110 cf1cfbda82db2b8c76a1c6ac5b9ffa38 245 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 158 186 1.9E-44 T 05-07-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AC028_RS09110 cf1cfbda82db2b8c76a1c6ac5b9ffa38 245 ProSitePatterns PS01218 TatC family signature. 158 177 - T 05-07-2017 IPR019820 Sec-independent periplasmic protein translocase, conserved site AC028_RS07735 b98d211b6e0d7372cff738f93ae7663c 193 SMART SM01266 5 59 3.7E-16 T 05-07-2017 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AC028_RS07735 b98d211b6e0d7372cff738f93ae7663c 193 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 139 167 - T 05-07-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AC028_RS07735 b98d211b6e0d7372cff738f93ae7663c 193 Pfam PF12464 Maltose acetyltransferase 7 58 4.7E-10 T 05-07-2017 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 AC028_RS07735 b98d211b6e0d7372cff738f93ae7663c 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 165 2.9E-10 T 05-07-2017 IPR001451 Hexapeptide repeat AC028_RS07735 b98d211b6e0d7372cff738f93ae7663c 193 Gene3D G3DSA:2.160.10.10 2 181 9.7E-59 T 05-07-2017 AC028_RS07735 b98d211b6e0d7372cff738f93ae7663c 193 SUPERFAMILY SSF51161 2 184 9.98E-54 T 05-07-2017 IPR011004 Trimeric LpxA-like AC028_RS15755 8ad55c8011baa10525327db800ea87dd 484 SUPERFAMILY SSF52425 15 218 9.55E-57 T 05-07-2017 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AC028_RS15755 8ad55c8011baa10525327db800ea87dd 484 Gene3D G3DSA:1.10.579.10 293 482 3.0E-73 T 05-07-2017 AC028_RS15755 8ad55c8011baa10525327db800ea87dd 484 Gene3D G3DSA:1.25.40.80 157 292 3.9E-38 T 05-07-2017 AC028_RS15755 8ad55c8011baa10525327db800ea87dd 484 Gene3D G3DSA:3.40.50.620 12 156 7.7E-50 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS15755 8ad55c8011baa10525327db800ea87dd 484 PRINTS PR00147 DNA photolyase signature 393 407 5.8E-23 T 05-07-2017 IPR002081 Cryptochrome/DNA photolyase class 1 AC028_RS15755 8ad55c8011baa10525327db800ea87dd 484 PRINTS PR00147 DNA photolyase signature 334 350 5.8E-23 T 05-07-2017 IPR002081 Cryptochrome/DNA photolyase class 1 AC028_RS15755 8ad55c8011baa10525327db800ea87dd 484 PRINTS PR00147 DNA photolyase signature 152 168 5.8E-23 T 05-07-2017 IPR002081 Cryptochrome/DNA photolyase class 1 AC028_RS15755 8ad55c8011baa10525327db800ea87dd 484 PRINTS PR00147 DNA photolyase signature 354 372 5.8E-23 T 05-07-2017 IPR002081 Cryptochrome/DNA photolyase class 1 AC028_RS15755 8ad55c8011baa10525327db800ea87dd 484 Pfam PF03441 FAD binding domain of DNA photolyase 284 480 1.4E-78 T 05-07-2017 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AC028_RS15755 8ad55c8011baa10525327db800ea87dd 484 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 334 346 - T 05-07-2017 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AC028_RS15755 8ad55c8011baa10525327db800ea87dd 484 SUPERFAMILY SSF48173 204 482 1.57E-99 T 05-07-2017 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AC028_RS15755 8ad55c8011baa10525327db800ea87dd 484 Pfam PF00875 DNA photolyase 16 174 1.0E-51 T 05-07-2017 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AC028_RS11820 a41419fb3a8beb6f131f648c172f3a43 164 Gene3D G3DSA:2.40.100.10 5 134 5.5E-61 T 05-07-2017 IPR029000 Cyclophilin-like domain AC028_RS11820 a41419fb3a8beb6f131f648c172f3a43 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 18 33 3.4E-35 T 05-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AC028_RS11820 a41419fb3a8beb6f131f648c172f3a43 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 83 98 3.4E-35 T 05-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AC028_RS11820 a41419fb3a8beb6f131f648c172f3a43 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 111 126 3.4E-35 T 05-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AC028_RS11820 a41419fb3a8beb6f131f648c172f3a43 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 110 3.4E-35 T 05-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AC028_RS11820 a41419fb3a8beb6f131f648c172f3a43 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 56 3.4E-35 T 05-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AC028_RS11820 a41419fb3a8beb6f131f648c172f3a43 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 5 135 5.7E-50 T 05-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AC028_RS11820 a41419fb3a8beb6f131f648c172f3a43 164 SUPERFAMILY SSF50891 4 136 1.61E-58 T 05-07-2017 IPR029000 Cyclophilin-like domain AC028_RS11820 a41419fb3a8beb6f131f648c172f3a43 164 PIRSF PIRSF001467 2 156 7.0E-56 T 05-07-2017 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 AC028_RS11820 a41419fb3a8beb6f131f648c172f3a43 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 39 56 - T 05-07-2017 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AC028_RS18050 3a67bf087168192a19ffa07134ffafdf 82 SUPERFAMILY SSF89447 2 42 5.76E-11 T 05-07-2017 AC028_RS18050 3a67bf087168192a19ffa07134ffafdf 82 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 43 5.5E-11 T 05-07-2017 IPR007159 SpoVT-AbrB domain GO:0003677 AC028_RS18050 3a67bf087168192a19ffa07134ffafdf 82 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 3 42 1.2E-12 T 05-07-2017 IPR007159 SpoVT-AbrB domain GO:0003677 AC028_RS18050 3a67bf087168192a19ffa07134ffafdf 82 SMART SM00966 3 46 3.4E-11 T 05-07-2017 IPR007159 SpoVT-AbrB domain GO:0003677 AC028_RS18050 3a67bf087168192a19ffa07134ffafdf 82 Gene3D G3DSA:2.10.260.10 2 42 6.3E-14 T 05-07-2017 AC028_RS19805 33fc1e9f12febf8f6aba9575872d3f4c 456 Gene3D G3DSA:3.40.190.10 29 142 1.9E-48 T 05-07-2017 AC028_RS19805 33fc1e9f12febf8f6aba9575872d3f4c 456 Gene3D G3DSA:3.40.190.10 297 369 1.9E-48 T 05-07-2017 AC028_RS19805 33fc1e9f12febf8f6aba9575872d3f4c 456 SUPERFAMILY SSF53850 28 408 1.9E-87 T 05-07-2017 AC028_RS19805 33fc1e9f12febf8f6aba9575872d3f4c 456 Pfam PF13416 Bacterial extracellular solute-binding protein 44 354 3.9E-42 T 05-07-2017 AC028_RS14260 943d56d71af823862611fce3de15f3f8 617 SUPERFAMILY SSF53187 95 357 5.95E-44 T 05-07-2017 AC028_RS14260 943d56d71af823862611fce3de15f3f8 617 Pfam PF00246 Zinc carboxypeptidase 102 254 8.0E-21 T 05-07-2017 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AC028_RS14260 943d56d71af823862611fce3de15f3f8 617 SMART SM00631 96 301 4.3E-6 T 05-07-2017 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AC028_RS14260 943d56d71af823862611fce3de15f3f8 617 Gene3D G3DSA:3.40.630.10 84 369 6.0E-41 T 05-07-2017 AC028_RS06000 9d50d2ce1f41d350c79ba5ca3dae5e70 311 PRINTS PR00111 Alpha/beta hydrolase fold signature 249 263 3.9E-6 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS06000 9d50d2ce1f41d350c79ba5ca3dae5e70 311 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 104 3.9E-6 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS06000 9d50d2ce1f41d350c79ba5ca3dae5e70 311 PRINTS PR00111 Alpha/beta hydrolase fold signature 136 149 3.9E-6 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS06000 9d50d2ce1f41d350c79ba5ca3dae5e70 311 Pfam PF12697 Alpha/beta hydrolase family 65 295 3.7E-21 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS06000 9d50d2ce1f41d350c79ba5ca3dae5e70 311 Gene3D G3DSA:3.40.50.1820 36 305 7.0E-46 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS06000 9d50d2ce1f41d350c79ba5ca3dae5e70 311 SUPERFAMILY SSF53474 47 306 3.48E-47 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS03935 30b28aee8678af7e24343dfc25cb8155 240 TIGRFAM TIGR00613 reco: DNA repair protein RecO 7 153 2.3E-22 T 05-07-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AC028_RS03935 30b28aee8678af7e24343dfc25cb8155 240 SUPERFAMILY SSF57863 87 156 1.02E-5 T 05-07-2017 AC028_RS03935 30b28aee8678af7e24343dfc25cb8155 240 Pfam PF02565 Recombination protein O C terminal 84 231 1.7E-16 T 05-07-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AC028_RS03935 30b28aee8678af7e24343dfc25cb8155 240 Hamap MF_00201 DNA repair protein RecO [recO]. 2 236 19.59 T 05-07-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AC028_RS03935 30b28aee8678af7e24343dfc25cb8155 240 Gene3D G3DSA:2.40.50.140 5 83 6.3E-10 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS03935 30b28aee8678af7e24343dfc25cb8155 240 Pfam PF11967 Recombination protein O N terminal 3 78 1.6E-20 T 05-07-2017 IPR022572 DNA replication/recombination mediator RecO, N-terminal AC028_RS03935 30b28aee8678af7e24343dfc25cb8155 240 SUPERFAMILY SSF50249 3 78 7.54E-12 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS22360 fb72856acec2098f871c5cae7235a3d3 214 Pfam PF07751 Abi-like protein 16 169 1.9E-4 T 05-07-2017 IPR011664 Abortive infection system protein AbiD/AbiF-like AC028_RS01955 0681bef44d8342ec8630721f8c26cafd 130 Pfam PF00816 H-NS histone family 16 108 7.3E-18 T 05-07-2017 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AC028_RS01955 0681bef44d8342ec8630721f8c26cafd 130 Gene3D G3DSA:4.10.430.10 91 107 2.1E-5 T 05-07-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AC028_RS01955 0681bef44d8342ec8630721f8c26cafd 130 SMART SM00528 75 118 1.3E-8 T 05-07-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AC028_RS01955 0681bef44d8342ec8630721f8c26cafd 130 SUPERFAMILY SSF81273 80 108 4.32E-6 T 05-07-2017 AC028_RS14945 fa633ea0dea59f4545840739671c800e 674 Gene3D G3DSA:1.10.1370.10 500 672 1.9E-134 T 05-07-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AC028_RS14945 fa633ea0dea59f4545840739671c800e 674 Gene3D G3DSA:1.10.1370.10 140 346 1.9E-134 T 05-07-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AC028_RS14945 fa633ea0dea59f4545840739671c800e 674 Gene3D G3DSA:3.40.390.10 357 499 1.6E-53 T 05-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AC028_RS14945 fa633ea0dea59f4545840739671c800e 674 Gene3D G3DSA:1.20.1050.40 12 137 1.4E-20 T 05-07-2017 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal AC028_RS14945 fa633ea0dea59f4545840739671c800e 674 SUPERFAMILY SSF55486 1 671 6.72E-191 T 05-07-2017 AC028_RS14945 fa633ea0dea59f4545840739671c800e 674 Pfam PF01432 Peptidase family M3 224 671 3.4E-142 T 05-07-2017 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 AC028_RS13455 f22e4ecb8f4416282a05924656ea227c 225 Gene3D G3DSA:3.40.140.10 101 224 2.2E-46 T 05-07-2017 AC028_RS13455 f22e4ecb8f4416282a05924656ea227c 225 Pfam PF04002 RadC-like JAB domain 104 222 1.4E-41 T 05-07-2017 IPR025657 RadC-like JAB domain AC028_RS13455 f22e4ecb8f4416282a05924656ea227c 225 SUPERFAMILY SSF47781 16 88 6.23E-5 T 05-07-2017 IPR010994 RuvA domain 2-like AC028_RS13455 f22e4ecb8f4416282a05924656ea227c 225 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 3.2E-66 T 05-07-2017 IPR001405 RadC protein AC028_RS13455 f22e4ecb8f4416282a05924656ea227c 225 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 05-07-2017 IPR020891 Uncharacterised protein family UPF0758, conserved site AC028_RS04970 4de6ae72665508516150e1149554d23c 356 PIRSF PIRSF018266 2 350 1.9E-70 T 05-07-2017 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AC028_RS04970 4de6ae72665508516150e1149554d23c 356 Pfam PF04773 FecR protein 140 230 7.6E-16 T 05-07-2017 IPR006860 FecR protein AC028_RS04970 4de6ae72665508516150e1149554d23c 356 Pfam PF16344 Domain of unknown function (DUF4974) 249 321 2.7E-7 T 05-07-2017 IPR032508 Protein FecR, C-terminal AC028_RS04970 4de6ae72665508516150e1149554d23c 356 Pfam PF16220 Domain of unknown function (DUF4880) 13 54 8.3E-8 T 05-07-2017 IPR032623 FecR, N-terminal AC028_RS08870 bf5363554d64021a530e1b3daffec428 531 SUPERFAMILY SSF111283 29 523 4.84E-90 T 05-07-2017 AC028_RS08870 bf5363554d64021a530e1b3daffec428 531 Pfam PF01523 Putative modulator of DNA gyrase 46 372 1.1E-53 T 05-07-2017 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AC028_RS13260 4b2fbf784992ae1dd1568b1fd703dd3c 231 SUPERFAMILY SSF46785 3 63 4.97E-10 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS13260 4b2fbf784992ae1dd1568b1fd703dd3c 231 Pfam PF08279 HTH domain 7 60 5.2E-13 T 05-07-2017 IPR013196 Helix-turn-helix, type 11 AC028_RS13260 4b2fbf784992ae1dd1568b1fd703dd3c 231 Pfam PF13280 WYL domain 138 213 4.2E-8 T 05-07-2017 IPR026881 WYL domain AC028_RS13260 4b2fbf784992ae1dd1568b1fd703dd3c 231 Gene3D G3DSA:1.10.10.10 3 64 1.2E-18 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS16310 d04f5ce0fff4f65464dae354513ac887 467 Pfam PF00206 Lyase 13 337 3.0E-100 T 05-07-2017 IPR022761 Fumarate lyase, N-terminal AC028_RS16310 d04f5ce0fff4f65464dae354513ac887 467 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 2.6E-32 T 05-07-2017 IPR000362 Fumarate lyase family AC028_RS16310 d04f5ce0fff4f65464dae354513ac887 467 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 2.6E-32 T 05-07-2017 IPR000362 Fumarate lyase family AC028_RS16310 d04f5ce0fff4f65464dae354513ac887 467 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 2.6E-32 T 05-07-2017 IPR000362 Fumarate lyase family AC028_RS16310 d04f5ce0fff4f65464dae354513ac887 467 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 2.6E-32 T 05-07-2017 IPR000362 Fumarate lyase family AC028_RS16310 d04f5ce0fff4f65464dae354513ac887 467 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 78.605 T 05-07-2017 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AC028_RS16310 d04f5ce0fff4f65464dae354513ac887 467 Gene3D G3DSA:1.10.40.30 413 459 2.4E-19 T 05-07-2017 AC028_RS16310 d04f5ce0fff4f65464dae354513ac887 467 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 3.6E-6 T 05-07-2017 AC028_RS16310 d04f5ce0fff4f65464dae354513ac887 467 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 3.6E-6 T 05-07-2017 AC028_RS16310 d04f5ce0fff4f65464dae354513ac887 467 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 3.6E-6 T 05-07-2017 AC028_RS16310 d04f5ce0fff4f65464dae354513ac887 467 Gene3D G3DSA:1.10.275.10 4 133 3.5E-52 T 05-07-2017 IPR024083 Fumarase/histidase, N-terminal AC028_RS16310 d04f5ce0fff4f65464dae354513ac887 467 Pfam PF10415 Fumarase C C-terminus 403 456 1.4E-18 T 05-07-2017 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AC028_RS16310 d04f5ce0fff4f65464dae354513ac887 467 SUPERFAMILY SSF48557 5 455 6.13E-142 T 05-07-2017 IPR008948 L-Aspartase-like GO:0003824 AC028_RS16310 d04f5ce0fff4f65464dae354513ac887 467 Gene3D G3DSA:1.20.200.10 134 412 6.0E-92 T 05-07-2017 AC028_RS16310 d04f5ce0fff4f65464dae354513ac887 467 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 05-07-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 AC028_RS16540 8b7efb7046f43e93aa368b6b7b47738e 363 Gene3D G3DSA:3.40.190.10 204 361 8.4E-36 T 05-07-2017 AC028_RS16540 8b7efb7046f43e93aa368b6b7b47738e 363 Pfam PF12849 PBP superfamily domain 42 332 8.4E-60 T 05-07-2017 IPR024370 PBP domain AC028_RS16540 8b7efb7046f43e93aa368b6b7b47738e 363 Gene3D G3DSA:3.40.190.10 51 193 5.5E-53 T 05-07-2017 AC028_RS16540 8b7efb7046f43e93aa368b6b7b47738e 363 PIRSF PIRSF002756 4 361 1.7E-105 T 05-07-2017 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 AC028_RS16540 8b7efb7046f43e93aa368b6b7b47738e 363 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 52 359 3.3E-124 T 05-07-2017 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 AC028_RS16540 8b7efb7046f43e93aa368b6b7b47738e 363 SUPERFAMILY SSF53850 52 359 2.42E-97 T 05-07-2017 AC028_RS12110 08bd9c2102a212718819c6d4d7ab72d7 656 Gene3D G3DSA:3.10.50.40 280 408 1.2E-41 T 05-07-2017 AC028_RS12110 08bd9c2102a212718819c6d4d7ab72d7 656 Pfam PF13145 PPIC-type PPIASE domain 397 512 7.7E-8 T 05-07-2017 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AC028_RS12110 08bd9c2102a212718819c6d4d7ab72d7 656 SUPERFAMILY SSF54534 283 389 5.49E-32 T 05-07-2017 AC028_RS12110 08bd9c2102a212718819c6d4d7ab72d7 656 Pfam PF13616 PPIC-type PPIASE domain 281 388 7.4E-30 T 05-07-2017 AC028_RS12110 08bd9c2102a212718819c6d4d7ab72d7 656 SUPERFAMILY SSF109998 221 258 5.1E-19 T 05-07-2017 IPR027304 Trigger factor/SurA domain AC028_RS12110 08bd9c2102a212718819c6d4d7ab72d7 656 SUPERFAMILY SSF109998 68 188 5.1E-19 T 05-07-2017 IPR027304 Trigger factor/SurA domain AC028_RS12110 08bd9c2102a212718819c6d4d7ab72d7 656 Pfam PF13623 SurA N-terminal domain 2 159 2.9E-26 T 05-07-2017 AC028_RS12110 08bd9c2102a212718819c6d4d7ab72d7 656 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 326 347 - T 05-07-2017 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-936440 AC028_RS09345 1db104ec89c61dc8e326415bacbdea77 177 SUPERFAMILY SSF50814 8 174 5.61E-32 T 05-07-2017 IPR011038 Calycin-like AC028_RS09345 1db104ec89c61dc8e326415bacbdea77 177 Gene3D G3DSA:2.40.128.20 6 175 3.1E-38 T 05-07-2017 IPR012674 Calycin AC028_RS09345 1db104ec89c61dc8e326415bacbdea77 177 PRINTS PR01171 Bacterial lipocalin signature 136 147 1.2E-9 T 05-07-2017 IPR002446 Lipocalin, bacterial GO:0005215 AC028_RS09345 1db104ec89c61dc8e326415bacbdea77 177 PRINTS PR01171 Bacterial lipocalin signature 33 47 1.2E-9 T 05-07-2017 IPR002446 Lipocalin, bacterial GO:0005215 AC028_RS09345 1db104ec89c61dc8e326415bacbdea77 177 PRINTS PR01171 Bacterial lipocalin signature 163 173 1.2E-9 T 05-07-2017 IPR002446 Lipocalin, bacterial GO:0005215 AC028_RS09345 1db104ec89c61dc8e326415bacbdea77 177 PRINTS PR01171 Bacterial lipocalin signature 50 66 1.2E-9 T 05-07-2017 IPR002446 Lipocalin, bacterial GO:0005215 AC028_RS09345 1db104ec89c61dc8e326415bacbdea77 177 PRINTS PR01171 Bacterial lipocalin signature 104 118 1.2E-9 T 05-07-2017 IPR002446 Lipocalin, bacterial GO:0005215 AC028_RS09345 1db104ec89c61dc8e326415bacbdea77 177 Pfam PF08212 Lipocalin-like domain 33 174 1.7E-44 T 05-07-2017 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AC028_RS09345 1db104ec89c61dc8e326415bacbdea77 177 PIRSF PIRSF036893 1 177 4.3E-40 T 05-07-2017 IPR022271 Lipocalin, ApoD type AC028_RS21645 7e0054914f07a9c66ae12125a38c275e 266 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 191 0.0022 T 05-07-2017 AC028_RS21645 7e0054914f07a9c66ae12125a38c275e 266 PIRSF PIRSF000126 1 264 3.0E-52 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS21645 7e0054914f07a9c66ae12125a38c275e 266 Pfam PF00106 short chain dehydrogenase 8 189 3.3E-36 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS21645 7e0054914f07a9c66ae12125a38c275e 266 SUPERFAMILY SSF51735 7 257 4.03E-54 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS21645 7e0054914f07a9c66ae12125a38c275e 266 Gene3D G3DSA:3.40.50.720 8 253 1.3E-52 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS21645 7e0054914f07a9c66ae12125a38c275e 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.8E-8 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS21645 7e0054914f07a9c66ae12125a38c275e 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.8E-8 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS21645 7e0054914f07a9c66ae12125a38c275e 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.8E-8 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS21645 7e0054914f07a9c66ae12125a38c275e 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.1E-20 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS21645 7e0054914f07a9c66ae12125a38c275e 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.1E-20 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS21645 7e0054914f07a9c66ae12125a38c275e 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.1E-20 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS21645 7e0054914f07a9c66ae12125a38c275e 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-20 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS21645 7e0054914f07a9c66ae12125a38c275e 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.1E-20 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS05605 e2b0d1dc06f34e1591ed30c7f07f33f8 143 Pfam PF00472 RF-1 domain 11 137 1.0E-23 T 05-07-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AC028_RS05605 e2b0d1dc06f34e1591ed30c7f07f33f8 143 Gene3D G3DSA:3.30.160.200 6 110 9.5E-32 T 05-07-2017 AC028_RS05605 e2b0d1dc06f34e1591ed30c7f07f33f8 143 SUPERFAMILY SSF110916 11 101 3.4E-12 T 05-07-2017 AC028_RS05605 e2b0d1dc06f34e1591ed30c7f07f33f8 143 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 25 41 - T 05-07-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AC028_RS11615 a09ae44c6472ef6fda23e557910517a0 124 PIRSF PIRSF002133 1 124 7.2E-54 T 05-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11615 a09ae44c6472ef6fda23e557910517a0 124 SUPERFAMILY SSF50249 3 123 5.31E-50 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS11615 a09ae44c6472ef6fda23e557910517a0 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 8.7E-68 T 05-07-2017 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11615 a09ae44c6472ef6fda23e557910517a0 124 Pfam PF00164 Ribosomal protein S12/S23 5 123 3.9E-41 T 05-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11615 a09ae44c6472ef6fda23e557910517a0 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.549 T 05-07-2017 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11615 a09ae44c6472ef6fda23e557910517a0 124 Gene3D G3DSA:2.40.50.140 1 123 5.9E-64 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS11615 a09ae44c6472ef6fda23e557910517a0 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 6.2E-59 T 05-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11615 a09ae44c6472ef6fda23e557910517a0 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 6.2E-59 T 05-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11615 a09ae44c6472ef6fda23e557910517a0 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 6.2E-59 T 05-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11615 a09ae44c6472ef6fda23e557910517a0 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 6.2E-59 T 05-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11615 a09ae44c6472ef6fda23e557910517a0 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 6.2E-59 T 05-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11615 a09ae44c6472ef6fda23e557910517a0 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 6.2E-59 T 05-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11615 a09ae44c6472ef6fda23e557910517a0 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 05-07-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS04575 dec1755c2f25614992d05ecded8cfacd 66 SMART SM00530 4 59 7.6E-19 T 05-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AC028_RS04575 dec1755c2f25614992d05ecded8cfacd 66 Gene3D G3DSA:1.10.260.40 1 64 3.3E-23 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS04575 dec1755c2f25614992d05ecded8cfacd 66 SUPERFAMILY SSF47413 3 64 1.9E-18 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS04575 dec1755c2f25614992d05ecded8cfacd 66 Pfam PF01381 Helix-turn-helix 5 57 2.7E-17 T 05-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AC028_RS17145 f4a56340eb3718dfe65a42fc10cfa6ab 280 Gene3D G3DSA:3.40.50.150 23 224 5.7E-32 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS17145 f4a56340eb3718dfe65a42fc10cfa6ab 280 SUPERFAMILY SSF53335 22 280 2.59E-35 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS17145 f4a56340eb3718dfe65a42fc10cfa6ab 280 Pfam PF13649 Methyltransferase domain 65 159 3.7E-17 T 05-07-2017 AC028_RS21075 fda5ab65b6bf8bb65ef02dc1ed91e55a 538 SUPERFAMILY SSF53720 30 490 8.25E-74 T 05-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AC028_RS21075 fda5ab65b6bf8bb65ef02dc1ed91e55a 538 Gene3D G3DSA:3.40.605.10 14 269 1.2E-38 T 05-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AC028_RS21075 fda5ab65b6bf8bb65ef02dc1ed91e55a 538 Pfam PF00171 Aldehyde dehydrogenase family 26 429 3.0E-44 T 05-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AC028_RS21075 fda5ab65b6bf8bb65ef02dc1ed91e55a 538 Gene3D G3DSA:3.40.309.10 271 461 2.3E-50 T 05-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AC028_RS06840 b87b557682772103e1d5b577b3a9b72b 264 SMART SM00382 33 223 2.8E-8 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS06840 b87b557682772103e1d5b577b3a9b72b 264 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS06840 b87b557682772103e1d5b577b3a9b72b 264 Pfam PF00005 ABC transporter 24 171 6.7E-28 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS06840 b87b557682772103e1d5b577b3a9b72b 264 SUPERFAMILY SSF52540 7 234 5.55E-61 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06840 b87b557682772103e1d5b577b3a9b72b 264 Gene3D G3DSA:3.40.50.300 4 235 3.9E-65 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18700 1282a5a69a5e518aa7c2fd659f255e9d 396 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 143 340 1.1E-30 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18700 1282a5a69a5e518aa7c2fd659f255e9d 396 SMART SM00283 78 350 6.9E-13 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS18700 1282a5a69a5e518aa7c2fd659f255e9d 396 Gene3D G3DSA:1.10.287.950 107 309 5.7E-42 T 05-07-2017 AC028_RS18700 1282a5a69a5e518aa7c2fd659f255e9d 396 SUPERFAMILY SSF58104 63 342 1.83E-44 T 05-07-2017 AC028_RS00945 7fb003cbb8f1511d5168a1838eb6246b 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 204 218 6.4E-6 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS00945 7fb003cbb8f1511d5168a1838eb6246b 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 6.4E-6 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS00945 7fb003cbb8f1511d5168a1838eb6246b 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 79 92 6.4E-6 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS00945 7fb003cbb8f1511d5168a1838eb6246b 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 34 49 6.4E-6 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS00945 7fb003cbb8f1511d5168a1838eb6246b 280 SUPERFAMILY SSF53474 3 258 1.85E-40 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS00945 7fb003cbb8f1511d5168a1838eb6246b 280 Gene3D G3DSA:3.40.50.1820 3 258 1.9E-54 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS00945 7fb003cbb8f1511d5168a1838eb6246b 280 Pfam PF12146 Serine aminopeptidase, S33 6 245 6.0E-18 T 05-07-2017 IPR022742 Serine aminopeptidase, S33 AC028_RS09450 9110e2a6ad68abefd63655290e4986a1 317 Gene3D G3DSA:2.30.330.10 232 310 1.6E-13 T 05-07-2017 AC028_RS09450 9110e2a6ad68abefd63655290e4986a1 317 SUPERFAMILY SSF101801 238 311 3.53E-13 T 05-07-2017 IPR001543 Surface presentation of antigen (SpoA) AC028_RS09450 9110e2a6ad68abefd63655290e4986a1 317 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 240 309 1.9E-12 T 05-07-2017 IPR001543 Surface presentation of antigen (SpoA) AC028_RS09450 9110e2a6ad68abefd63655290e4986a1 317 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 38 309 5.2E-51 T 05-07-2017 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 AC028_RS13690 fac7fb5a1815e0122d8ae46cd39cf4a6 723 SUPERFAMILY SSF51445 3 371 4.84E-99 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS13690 fac7fb5a1815e0122d8ae46cd39cf4a6 723 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 253 270 - T 05-07-2017 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AC028_RS13690 fac7fb5a1815e0122d8ae46cd39cf4a6 723 SMART SM01217 641 710 2.1E-30 T 05-07-2017 IPR026891 Fibronectin type III-like domain AC028_RS13690 fac7fb5a1815e0122d8ae46cd39cf4a6 723 Gene3D G3DSA:3.20.20.300 2 350 5.7E-105 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS13690 fac7fb5a1815e0122d8ae46cd39cf4a6 723 Pfam PF14310 Fibronectin type III-like domain 641 709 6.5E-20 T 05-07-2017 IPR026891 Fibronectin type III-like domain AC028_RS13690 fac7fb5a1815e0122d8ae46cd39cf4a6 723 PRINTS PR00133 Glycosyl hydrolase family 3 signature 253 271 2.8E-18 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS13690 fac7fb5a1815e0122d8ae46cd39cf4a6 723 PRINTS PR00133 Glycosyl hydrolase family 3 signature 81 97 2.8E-18 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS13690 fac7fb5a1815e0122d8ae46cd39cf4a6 723 PRINTS PR00133 Glycosyl hydrolase family 3 signature 100 119 2.8E-18 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS13690 fac7fb5a1815e0122d8ae46cd39cf4a6 723 PRINTS PR00133 Glycosyl hydrolase family 3 signature 146 162 2.8E-18 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS13690 fac7fb5a1815e0122d8ae46cd39cf4a6 723 PRINTS PR00133 Glycosyl hydrolase family 3 signature 183 199 2.8E-18 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS13690 fac7fb5a1815e0122d8ae46cd39cf4a6 723 SUPERFAMILY SSF52279 372 607 1.96E-51 T 05-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AC028_RS13690 fac7fb5a1815e0122d8ae46cd39cf4a6 723 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 14 332 1.1E-69 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS13690 fac7fb5a1815e0122d8ae46cd39cf4a6 723 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 372 604 4.3E-51 T 05-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AC028_RS13690 fac7fb5a1815e0122d8ae46cd39cf4a6 723 Gene3D G3DSA:3.40.50.1700 358 607 8.6E-69 T 05-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AC028_RS00490 655e0dc9d282ec7ed4f3ca7f2a7657fb 186 Gene3D G3DSA:2.60.450.10 23 158 6.2E-30 T 05-07-2017 AC028_RS00490 655e0dc9d282ec7ed4f3ca7f2a7657fb 186 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 3 161 23.528 T 05-07-2017 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AC028_RS00490 655e0dc9d282ec7ed4f3ca7f2a7657fb 186 Pfam PF03968 OstA-like protein 34 143 1.2E-25 T 05-07-2017 IPR005653 Organic solvent tolerance-like, N-terminal AC028_RS00490 655e0dc9d282ec7ed4f3ca7f2a7657fb 186 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 22 161 2.7E-40 T 05-07-2017 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AC028_RS19930 5b41bfe884e0ba77f28af640708ab38c 578 Pfam PF00005 ABC transporter 389 526 6.0E-25 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS19930 5b41bfe884e0ba77f28af640708ab38c 578 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 41 568 3.7E-149 T 05-07-2017 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 AC028_RS19930 5b41bfe884e0ba77f28af640708ab38c 578 SUPERFAMILY SSF52540 374 571 3.12E-50 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19930 5b41bfe884e0ba77f28af640708ab38c 578 SUPERFAMILY SSF90123 39 347 2.22E-40 T 05-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AC028_RS19930 5b41bfe884e0ba77f28af640708ab38c 578 Pfam PF00664 ABC transporter transmembrane region 44 289 9.6E-18 T 05-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AC028_RS19930 5b41bfe884e0ba77f28af640708ab38c 578 SMART SM00382 397 572 4.5E-18 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS19930 5b41bfe884e0ba77f28af640708ab38c 578 ProSitePatterns PS00211 ABC transporters family signature. 498 512 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS19930 5b41bfe884e0ba77f28af640708ab38c 578 Gene3D G3DSA:1.20.1560.10 43 347 4.1E-32 T 05-07-2017 AC028_RS19930 5b41bfe884e0ba77f28af640708ab38c 578 Gene3D G3DSA:3.40.50.300 385 573 3.4E-55 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS20110 157e7735f7f7ff1775dc6b1004c6cc48 316 SMART SM00859 7 128 6.8E-34 T 05-07-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AC028_RS20110 157e7735f7f7ff1775dc6b1004c6cc48 316 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 7 315 5.3E-101 T 05-07-2017 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AC028_RS20110 157e7735f7f7ff1775dc6b1004c6cc48 316 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 8 122 7.3E-28 T 05-07-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AC028_RS20110 157e7735f7f7ff1775dc6b1004c6cc48 316 Gene3D G3DSA:3.30.360.10 143 290 1.5E-36 T 05-07-2017 AC028_RS20110 157e7735f7f7ff1775dc6b1004c6cc48 316 SUPERFAMILY SSF51735 5 152 5.11E-42 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS20110 157e7735f7f7ff1775dc6b1004c6cc48 316 SUPERFAMILY SSF55347 136 290 2.26E-35 T 05-07-2017 AC028_RS20110 157e7735f7f7ff1775dc6b1004c6cc48 316 Gene3D G3DSA:3.40.50.720 5 142 4.1E-41 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS20110 157e7735f7f7ff1775dc6b1004c6cc48 316 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 131 147 - T 05-07-2017 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AC028_RS20110 157e7735f7f7ff1775dc6b1004c6cc48 316 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 6 316 30.946 T 05-07-2017 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AC028_RS09240 bb77ffd1f36e28ed60c91c653ee4d0e6 248 SUPERFAMILY SSF46689 27 98 9.75E-14 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS09240 bb77ffd1f36e28ed60c91c653ee4d0e6 248 Pfam PF00440 Bacterial regulatory proteins, tetR family 37 83 1.8E-12 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS09240 bb77ffd1f36e28ed60c91c653ee4d0e6 248 Gene3D G3DSA:1.10.357.10 26 209 3.9E-21 T 05-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AC028_RS09240 bb77ffd1f36e28ed60c91c653ee4d0e6 248 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 58 81 7.2E-6 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS09240 bb77ffd1f36e28ed60c91c653ee4d0e6 248 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 50 7.2E-6 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS09240 bb77ffd1f36e28ed60c91c653ee4d0e6 248 ProSitePatterns PS01081 TetR-type HTH domain signature. 49 80 - T 05-07-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AC028_RS19605 75cc212f4d1a34a1c0ec5506d3049e72 375 SUPERFAMILY SSF158472 318 365 7.98E-8 T 05-07-2017 AC028_RS19605 75cc212f4d1a34a1c0ec5506d3049e72 375 SMART SM00304 317 370 1.1E-5 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS19605 75cc212f4d1a34a1c0ec5506d3049e72 375 SUPERFAMILY SSF103190 108 209 2.63E-10 T 05-07-2017 IPR029151 Periplasmic sensor domain-like AC028_RS19605 75cc212f4d1a34a1c0ec5506d3049e72 375 Pfam PF17201 Cache 3/Cache 2 fusion domain 43 235 2.9E-41 T 05-07-2017 IPR033462 Cache 3/Cache 2 fusion domain AC028_RS19605 75cc212f4d1a34a1c0ec5506d3049e72 375 Pfam PF00672 HAMP domain 298 365 1.0E-8 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS17610 78e16decd39b6a5f69e40f6b6b6063b1 271 Pfam PF02548 Ketopantoate hydroxymethyltransferase 11 264 1.9E-101 T 05-07-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AC028_RS17610 78e16decd39b6a5f69e40f6b6b6063b1 271 PIRSF PIRSF000388 1 271 2.2E-94 T 05-07-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AC028_RS17610 78e16decd39b6a5f69e40f6b6b6063b1 271 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 15 269 1.6E-96 T 05-07-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AC028_RS17610 78e16decd39b6a5f69e40f6b6b6063b1 271 Gene3D G3DSA:3.20.20.60 8 269 1.6E-104 T 05-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AC028_RS17610 78e16decd39b6a5f69e40f6b6b6063b1 271 SUPERFAMILY SSF51621 10 269 2.75E-97 T 05-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AC028_RS17610 78e16decd39b6a5f69e40f6b6b6063b1 271 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 269 40.631 T 05-07-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AC028_RS18585 a215de067630f919bc098a7232642303 441 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 107 3.2E-17 T 05-07-2017 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 AC028_RS18585 a215de067630f919bc098a7232642303 441 Pfam PF07196 Flagellin hook IN motif 124 177 4.7E-8 T 05-07-2017 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AC028_RS18585 a215de067630f919bc098a7232642303 441 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 214 430 1.4E-48 T 05-07-2017 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 AC028_RS01305 fd8a7fbc4c06452534a03faddb8ceec3 182 PIRSF PIRSF005900 20 182 9.5E-47 T 05-07-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AC028_RS01305 fd8a7fbc4c06452534a03faddb8ceec3 182 ProSitePatterns PS00819 Dps protein family signature 2. 87 101 - T 05-07-2017 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AC028_RS01305 fd8a7fbc4c06452534a03faddb8ceec3 182 SUPERFAMILY SSF47240 28 182 2.22E-45 T 05-07-2017 IPR009078 Ferritin-like superfamily AC028_RS01305 fd8a7fbc4c06452534a03faddb8ceec3 182 ProSitePatterns PS00818 Dps protein family signature 1. 61 77 - T 05-07-2017 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AC028_RS01305 fd8a7fbc4c06452534a03faddb8ceec3 182 Gene3D G3DSA:1.20.1260.10 22 182 1.1E-65 T 05-07-2017 IPR012347 Ferritin-related AC028_RS01305 fd8a7fbc4c06452534a03faddb8ceec3 182 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 85 101 4.1E-12 T 05-07-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AC028_RS01305 fd8a7fbc4c06452534a03faddb8ceec3 182 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 61 77 4.1E-12 T 05-07-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AC028_RS01305 fd8a7fbc4c06452534a03faddb8ceec3 182 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 159 177 4.1E-12 T 05-07-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AC028_RS01305 fd8a7fbc4c06452534a03faddb8ceec3 182 Pfam PF00210 Ferritin-like domain 43 182 2.8E-29 T 05-07-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AC028_RS17185 84e09ee9012ab094749ed77b44ac4c0f 573 Pfam PF00005 ABC transporter 367 509 1.5E-19 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS17185 84e09ee9012ab094749ed77b44ac4c0f 573 SMART SM00382 369 560 5.1E-7 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS17185 84e09ee9012ab094749ed77b44ac4c0f 573 SUPERFAMILY SSF90123 20 314 5.89E-21 T 05-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AC028_RS17185 84e09ee9012ab094749ed77b44ac4c0f 573 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS17185 84e09ee9012ab094749ed77b44ac4c0f 573 Gene3D G3DSA:1.20.1560.10 20 314 3.5E-13 T 05-07-2017 AC028_RS17185 84e09ee9012ab094749ed77b44ac4c0f 573 SUPERFAMILY SSF52540 364 553 1.57E-38 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS17185 84e09ee9012ab094749ed77b44ac4c0f 573 Gene3D G3DSA:3.40.50.300 368 551 2.1E-36 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS16525 482300657ddbeb1ce2e2682c8b8fafc1 276 Pfam PF00005 ABC transporter 45 201 1.1E-32 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS16525 482300657ddbeb1ce2e2682c8b8fafc1 276 SUPERFAMILY SSF52540 31 263 3.22E-59 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS16525 482300657ddbeb1ce2e2682c8b8fafc1 276 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS16525 482300657ddbeb1ce2e2682c8b8fafc1 276 Gene3D G3DSA:3.40.50.300 30 270 2.1E-69 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS16525 482300657ddbeb1ce2e2682c8b8fafc1 276 SMART SM00382 54 257 5.4E-14 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS16525 482300657ddbeb1ce2e2682c8b8fafc1 276 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 30 276 1.1E-115 T 05-07-2017 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AC028_RS07650 2b6998af864ba620cab02d75071bab05 605 Pfam PF05960 Bacterial protein of unknown function (DUF885) 70 583 2.1E-155 T 05-07-2017 IPR010281 Protein of unknown function DUF885 AC028_RS04685 0d32b07df79d45727ff15dd66d55c624 275 SMART SM01057 52 275 2.4E-97 T 05-07-2017 IPR001148 Alpha carbonic anhydrase AC028_RS04685 0d32b07df79d45727ff15dd66d55c624 275 Gene3D G3DSA:3.10.200.10 50 271 7.6E-67 T 05-07-2017 IPR001148 Alpha carbonic anhydrase AC028_RS04685 0d32b07df79d45727ff15dd66d55c624 275 SUPERFAMILY SSF51069 50 271 5.0E-72 T 05-07-2017 IPR001148 Alpha carbonic anhydrase AC028_RS04685 0d32b07df79d45727ff15dd66d55c624 275 Pfam PF00194 Eukaryotic-type carbonic anhydrase 51 269 7.9E-47 T 05-07-2017 IPR001148 Alpha carbonic anhydrase AC028_RS04685 0d32b07df79d45727ff15dd66d55c624 275 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 141 157 - T 05-07-2017 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0006730|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 AC028_RS20385 c339a53995801de217fb5a8a0e667e02 191 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 6 65 7.1E-28 T 05-07-2017 IPR012909 PHA accumulation regulator DNA-binding, N-terminal AC028_RS20385 c339a53995801de217fb5a8a0e667e02 191 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 5 111 4.1E-53 T 05-07-2017 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR GO:0006355 AC028_RS20385 c339a53995801de217fb5a8a0e667e02 191 Pfam PF05233 PHB accumulation regulatory domain 70 109 1.5E-18 T 05-07-2017 IPR007897 PHB accumulation regulatory AC028_RS08825 2a74cc565e942a67949342df65422ee3 263 Pfam PF12787 EcsC protein family 23 244 9.7E-39 T 05-07-2017 IPR024787 EcsC protein AC028_RS20990 23f0937f45ede9b88661f66da9e08e2c 134 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 72 128 5.0E-19 T 05-07-2017 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 AC028_RS06925 5d0581c15e824209d6e004e4cb29b5e9 403 Pfam PF13556 PucR C-terminal helix-turn-helix domain 321 378 1.3E-21 T 05-07-2017 IPR025736 PucR C-terminal helix-turn-helix domain AC028_RS06925 5d0581c15e824209d6e004e4cb29b5e9 403 Pfam PF05651 Putative sugar diacid recognition 4 134 1.3E-43 T 05-07-2017 IPR008599 Putative sugar diacid recognition AC028_RS06925 5d0581c15e824209d6e004e4cb29b5e9 403 Gene3D G3DSA:1.10.10.60 336 357 8.3E-6 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS13885 1ecacbc8b6fa3538d403581b1f664204 241 SUPERFAMILY SSF52141 8 228 1.31E-90 T 05-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AC028_RS13885 1ecacbc8b6fa3538d403581b1f664204 241 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 12 219 3.2E-79 T 05-07-2017 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AC028_RS13885 1ecacbc8b6fa3538d403581b1f664204 241 SMART SM00987 56 216 1.5E-41 T 05-07-2017 AC028_RS13885 1ecacbc8b6fa3538d403581b1f664204 241 Gene3D G3DSA:3.40.470.10 7 228 6.2E-98 T 05-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AC028_RS13885 1ecacbc8b6fa3538d403581b1f664204 241 SMART SM00986 56 216 1.5E-41 T 05-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AC028_RS13885 1ecacbc8b6fa3538d403581b1f664204 241 Pfam PF03167 Uracil DNA glycosylase superfamily 60 213 7.1E-24 T 05-07-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AC028_RS13885 1ecacbc8b6fa3538d403581b1f664204 241 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 11 227 39.856 T 05-07-2017 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AC028_RS13885 1ecacbc8b6fa3538d403581b1f664204 241 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 64 73 - T 05-07-2017 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AC028_RS10235 008e62069a2fe57b642c460da63bd72b 362 Pfam PF12693 GspL periplasmic domain 220 358 5.2E-7 T 05-07-2017 IPR025691 GspL periplasmic domain AC028_RS10235 008e62069a2fe57b642c460da63bd72b 362 Pfam PF05134 Type II secretion system (T2SS), protein L 23 158 9.1E-15 T 05-07-2017 IPR024230 GspL, cytoplasmic actin-ATPase-like domain AC028_RS10235 008e62069a2fe57b642c460da63bd72b 362 SUPERFAMILY SSF53067 1 134 8.29E-16 T 05-07-2017 AC028_RS10235 008e62069a2fe57b642c460da63bd72b 362 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 359 3.8E-74 T 05-07-2017 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AC028_RS20615 2c74f40475e0fbd8498e5bc51d9e22b0 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 270 4.5E-18 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS20615 2c74f40475e0fbd8498e5bc51d9e22b0 282 SUPERFAMILY SSF161098 6 266 2.43E-52 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS20615 2c74f40475e0fbd8498e5bc51d9e22b0 282 Gene3D G3DSA:1.10.3720.10 13 269 3.0E-55 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS20575 38dc5ee095a9a7c5a898fe985642668b 327 Pfam PF02562 PhoH-like protein 112 315 7.0E-92 T 05-07-2017 IPR003714 PhoH-like protein GO:0005524 AC028_RS20575 38dc5ee095a9a7c5a898fe985642668b 327 SUPERFAMILY SSF52540 118 290 7.63E-36 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS20575 38dc5ee095a9a7c5a898fe985642668b 327 Gene3D G3DSA:3.40.50.300 112 314 5.7E-84 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS12750 645cae1e861b7642d57c8f3870ab2aa0 55 Pfam PF01527 Transposase 2 52 1.8E-8 T 05-07-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AC028_RS17200 09861621082e01d6fec79366d904a56d 166 SUPERFAMILY SSF50475 9 139 4.49E-38 T 05-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 AC028_RS17200 09861621082e01d6fec79366d904a56d 166 Gene3D G3DSA:2.30.110.10 7 164 2.1E-54 T 05-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 AC028_RS17200 09861621082e01d6fec79366d904a56d 166 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 8 154 1.1E-51 T 05-07-2017 AC028_RS12220 0d60ba4892f5da431c81df2c21759a6f 116 SUPERFAMILY SSF54197 2 109 3.69E-34 T 05-07-2017 IPR011146 HIT-like domain GO:0003824 AC028_RS12220 0d60ba4892f5da431c81df2c21759a6f 116 Gene3D G3DSA:3.30.428.10 2 109 2.0E-35 T 05-07-2017 IPR011146 HIT-like domain GO:0003824 AC028_RS12220 0d60ba4892f5da431c81df2c21759a6f 116 PRINTS PR00332 Histidine triad family signature 95 105 8.7E-20 T 05-07-2017 IPR001310 Histidine triad (HIT) protein AC028_RS12220 0d60ba4892f5da431c81df2c21759a6f 116 PRINTS PR00332 Histidine triad family signature 26 44 8.7E-20 T 05-07-2017 IPR001310 Histidine triad (HIT) protein AC028_RS12220 0d60ba4892f5da431c81df2c21759a6f 116 PRINTS PR00332 Histidine triad family signature 5 21 8.7E-20 T 05-07-2017 IPR001310 Histidine triad (HIT) protein AC028_RS12220 0d60ba4892f5da431c81df2c21759a6f 116 Pfam PF01230 HIT domain 11 107 1.1E-23 T 05-07-2017 IPR001310 Histidine triad (HIT) protein AC028_RS12220 0d60ba4892f5da431c81df2c21759a6f 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 05-07-2017 IPR019808 Histidine triad, conserved site AC028_RS05775 0f285a40a30a2b8a5c4ae9c001b0bb74 128 Pfam PF03203 MerC mercury resistance protein 9 118 6.0E-22 T 05-07-2017 IPR004891 MerC mercury resistance protein AC028_RS05700 a93f1450d62f07b553882854a65bfac8 109 Gene3D G3DSA:3.40.50.1820 2 69 2.3E-17 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS05700 a93f1450d62f07b553882854a65bfac8 109 Pfam PF00326 Prolyl oligopeptidase family 2 70 1.4E-10 T 05-07-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AC028_RS05700 a93f1450d62f07b553882854a65bfac8 109 SUPERFAMILY SSF53474 2 69 3.62E-16 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS01505 dd3a93d59fa1ffafca0159c30b4d3c9f 219 SUPERFAMILY SSF56601 3 209 6.52E-60 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS01505 dd3a93d59fa1ffafca0159c30b4d3c9f 219 Pfam PF13354 Beta-lactamase enzyme family 3 183 2.6E-38 T 05-07-2017 AC028_RS01505 dd3a93d59fa1ffafca0159c30b4d3c9f 219 PRINTS PR00118 Beta-lactamase class A signature 70 94 9.7E-46 T 05-07-2017 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AC028_RS01505 dd3a93d59fa1ffafca0159c30b4d3c9f 219 PRINTS PR00118 Beta-lactamase class A signature 96 121 9.7E-46 T 05-07-2017 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AC028_RS01505 dd3a93d59fa1ffafca0159c30b4d3c9f 219 PRINTS PR00118 Beta-lactamase class A signature 149 164 9.7E-46 T 05-07-2017 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AC028_RS01505 dd3a93d59fa1ffafca0159c30b4d3c9f 219 PRINTS PR00118 Beta-lactamase class A signature 132 147 9.7E-46 T 05-07-2017 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AC028_RS01505 dd3a93d59fa1ffafca0159c30b4d3c9f 219 PRINTS PR00118 Beta-lactamase class A signature 34 59 9.7E-46 T 05-07-2017 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AC028_RS01505 dd3a93d59fa1ffafca0159c30b4d3c9f 219 Gene3D G3DSA:3.40.710.10 2 215 5.0E-82 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS19205 9aaecb20210c336c3cfa518118ad5178 269 Gene3D G3DSA:3.40.30.10 40 178 1.2E-20 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS19205 9aaecb20210c336c3cfa518118ad5178 269 SUPERFAMILY SSF52833 43 167 4.96E-19 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS19205 9aaecb20210c336c3cfa518118ad5178 269 Gene3D G3DSA:2.120.10.30 202 267 1.0E-8 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS19205 9aaecb20210c336c3cfa518118ad5178 269 SUPERFAMILY SSF63825 203 263 6.54E-5 T 05-07-2017 AC028_RS19205 9aaecb20210c336c3cfa518118ad5178 269 Pfam PF01436 NHL repeat 203 226 1.6E-5 T 05-07-2017 IPR001258 NHL repeat GO:0005515 AC028_RS11275 e647dd33bc367759a37a7704f44ca0f8 171 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 36 159 3.6E-41 T 05-07-2017 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 AC028_RS11275 e647dd33bc367759a37a7704f44ca0f8 171 Pfam PF08332 Calcium/calmodulin dependent protein kinase II association domain 36 159 1.2E-47 T 05-07-2017 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain GO:0004683|GO:0005516|GO:0006468 Reactome: R-HSA-3371571|Reactome: R-HSA-399719|Reactome: R-HSA-438066|Reactome: R-HSA-442729|Reactome: R-HSA-442742|Reactome: R-HSA-442982|Reactome: R-HSA-5576892|Reactome: R-HSA-5578775|Reactome: R-HSA-5673001|Reactome: R-HSA-877300|Reactome: R-HSA-936837 AC028_RS11275 e647dd33bc367759a37a7704f44ca0f8 171 Gene3D G3DSA:3.10.450.50 36 162 1.2E-33 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS11275 e647dd33bc367759a37a7704f44ca0f8 171 SUPERFAMILY SSF54427 36 158 4.1E-32 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS11275 e647dd33bc367759a37a7704f44ca0f8 171 PIRSF PIRSF028470 1 162 4.3E-73 T 05-07-2017 IPR016887 Uncharacterised conserved protein UCP028470, steroid isomerase-related AC028_RS18980 8f961b755179d617546e8d69dbb3845d 408 TIGRFAM TIGR01834 PHA_synth_III_E: poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit 11 312 1.8E-119 T 05-07-2017 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit AC028_RS18980 8f961b755179d617546e8d69dbb3845d 408 Pfam PF09712 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) 12 300 1.0E-81 T 05-07-2017 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit AC028_RS08585 63802c0c13c9c38ac46c8ca98dc0cabe 218 Pfam PF03006 Haemolysin-III related 19 205 1.4E-25 T 05-07-2017 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 AC028_RS16150 a58ebf08592a46a475fcbe22cf13a20f 815 Gene3D G3DSA:3.40.50.1820 190 260 1.8E-7 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS16150 a58ebf08592a46a475fcbe22cf13a20f 815 Pfam PF00082 Subtilase family 491 799 1.4E-43 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS16150 a58ebf08592a46a475fcbe22cf13a20f 815 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 754 764 - T 05-07-2017 IPR023828 Peptidase S8, subtilisin, Ser-active site AC028_RS16150 a58ebf08592a46a475fcbe22cf13a20f 815 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 544 554 - T 05-07-2017 IPR022398 Peptidase S8, subtilisin, His-active site AC028_RS16150 a58ebf08592a46a475fcbe22cf13a20f 815 Gene3D G3DSA:3.40.50.200 472 812 1.7E-65 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS16150 a58ebf08592a46a475fcbe22cf13a20f 815 SUPERFAMILY SSF53474 199 323 1.03E-9 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS16150 a58ebf08592a46a475fcbe22cf13a20f 815 SUPERFAMILY SSF52743 472 812 7.72E-58 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS16150 a58ebf08592a46a475fcbe22cf13a20f 815 PRINTS PR00723 Subtilisin serine protease family (S8) signature 753 769 1.8E-13 T 05-07-2017 IPR015500 Peptidase S8, subtilisin-related AC028_RS16150 a58ebf08592a46a475fcbe22cf13a20f 815 PRINTS PR00723 Subtilisin serine protease family (S8) signature 540 553 1.8E-13 T 05-07-2017 IPR015500 Peptidase S8, subtilisin-related AC028_RS16150 a58ebf08592a46a475fcbe22cf13a20f 815 PRINTS PR00723 Subtilisin serine protease family (S8) signature 485 504 1.8E-13 T 05-07-2017 IPR015500 Peptidase S8, subtilisin-related AC028_RS09325 b0596efbdf80cffdfbc700192d90073a 494 SUPERFAMILY SSF103473 66 485 2.49E-85 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS09325 b0596efbdf80cffdfbc700192d90073a 494 Gene3D G3DSA:1.20.1250.20 282 478 1.1E-24 T 05-07-2017 AC028_RS09325 b0596efbdf80cffdfbc700192d90073a 494 Pfam PF07690 Major Facilitator Superfamily 85 441 2.8E-56 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS09325 b0596efbdf80cffdfbc700192d90073a 494 Gene3D G3DSA:1.20.1250.20 75 267 1.2E-48 T 05-07-2017 AC028_RS20705 0d715293deaf3cddc1dec027f7572895 92 SUPERFAMILY SSF46785 8 72 4.72E-8 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS20705 0d715293deaf3cddc1dec027f7572895 92 Gene3D G3DSA:1.10.10.10 8 77 3.5E-7 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS15180 9a93074eeabdd20aa3735af750f25ee1 462 Gene3D G3DSA:3.40.50.1000 57 164 7.4E-5 T 05-07-2017 IPR023214 HAD-like domain AC028_RS15180 9a93074eeabdd20aa3735af750f25ee1 462 Gene3D G3DSA:3.40.50.1000 1 11 7.4E-5 T 05-07-2017 IPR023214 HAD-like domain AC028_RS15180 9a93074eeabdd20aa3735af750f25ee1 462 SUPERFAMILY SSF56784 2 14 3.54E-10 T 05-07-2017 IPR023214 HAD-like domain AC028_RS15180 9a93074eeabdd20aa3735af750f25ee1 462 SUPERFAMILY SSF56784 50 168 3.54E-10 T 05-07-2017 IPR023214 HAD-like domain AC028_RS15180 9a93074eeabdd20aa3735af750f25ee1 462 Pfam PF01040 UbiA prenyltransferase family 197 433 1.1E-21 T 05-07-2017 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 AC028_RS14460 c49e27428f4db406bd22c4716153e1a0 268 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 147 207 3.1E-5 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS14460 c49e27428f4db406bd22c4716153e1a0 268 SMART SM00387 143 239 3.2E-4 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS14460 c49e27428f4db406bd22c4716153e1a0 268 Pfam PF06580 Histidine kinase 49 128 1.4E-20 T 05-07-2017 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AC028_RS14460 c49e27428f4db406bd22c4716153e1a0 268 SUPERFAMILY SSF55874 106 237 3.41E-20 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS14460 c49e27428f4db406bd22c4716153e1a0 268 Gene3D G3DSA:3.30.565.10 105 238 1.4E-13 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS17855 1010c492c2ef8ac8303fa762218bdf44 188 Pfam PF03079 ARD/ARD' family 6 164 8.7E-32 T 05-07-2017 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 AC028_RS17855 1010c492c2ef8ac8303fa762218bdf44 188 Gene3D G3DSA:2.60.120.10 5 180 4.8E-54 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS17855 1010c492c2ef8ac8303fa762218bdf44 188 SUPERFAMILY SSF51182 3 179 1.95E-37 T 05-07-2017 IPR011051 RmlC-like cupin domain AC028_RS17855 1010c492c2ef8ac8303fa762218bdf44 188 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 37.724 T 05-07-2017 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.53+1.13.11.54|MetaCyc: PWY-4361|MetaCyc: PWY-5389 AC028_RS16995 1ec44ef904efb84d0f596405248aa6c1 154 Pfam PF01047 MarR family 50 97 5.5E-7 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS16995 1ec44ef904efb84d0f596405248aa6c1 154 SMART SM00347 33 133 1.3E-12 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS16995 1ec44ef904efb84d0f596405248aa6c1 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 1.2E-8 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS16995 1ec44ef904efb84d0f596405248aa6c1 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 1.2E-8 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS16995 1ec44ef904efb84d0f596405248aa6c1 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 123 143 1.2E-8 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS16995 1ec44ef904efb84d0f596405248aa6c1 154 Gene3D G3DSA:1.10.10.10 15 149 1.0E-28 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS16995 1ec44ef904efb84d0f596405248aa6c1 154 SUPERFAMILY SSF46785 16 149 3.6E-26 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS16375 ed69c8a2c7e5df3cf5e9a40d7e89396b 250 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 111 250 9.9E-27 T 05-07-2017 IPR018636 Protein of unknown function DUF2058 AC028_RS08615 b87cbf5bcbc13f290a171c1d968c92c7 303 Gene3D G3DSA:3.40.190.10 90 173 5.6E-23 T 05-07-2017 AC028_RS08615 b87cbf5bcbc13f290a171c1d968c92c7 303 SUPERFAMILY SSF46785 4 85 3.81E-17 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS08615 b87cbf5bcbc13f290a171c1d968c92c7 303 Gene3D G3DSA:3.40.190.10 174 258 5.7E-16 T 05-07-2017 AC028_RS08615 b87cbf5bcbc13f290a171c1d968c92c7 303 Gene3D G3DSA:1.10.10.10 3 84 7.0E-21 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS08615 b87cbf5bcbc13f290a171c1d968c92c7 303 Pfam PF03466 LysR substrate binding domain 88 291 1.2E-37 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS08615 b87cbf5bcbc13f290a171c1d968c92c7 303 SUPERFAMILY SSF53850 88 295 3.62E-40 T 05-07-2017 AC028_RS08615 b87cbf5bcbc13f290a171c1d968c92c7 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.0E-16 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS01375 5f24b5edfb3003664f1ff42269913644 224 SUPERFAMILY SSF52402 1 221 2.65E-63 T 05-07-2017 AC028_RS01375 5f24b5edfb3003664f1ff42269913644 224 PIRSF PIRSF006293 1 223 8.8E-78 T 05-07-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AC028_RS01375 5f24b5edfb3003664f1ff42269913644 224 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 3.5E-76 T 05-07-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AC028_RS01375 5f24b5edfb3003664f1ff42269913644 224 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 56.23 T 05-07-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AC028_RS01375 5f24b5edfb3003664f1ff42269913644 224 Gene3D G3DSA:3.40.50.620 1 222 3.1E-77 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS01375 5f24b5edfb3003664f1ff42269913644 224 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 3.5E-57 T 05-07-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AC028_RS14705 6e8a8071454acca3a89b6b6877eb6547 161 Gene3D G3DSA:3.30.70.990 9 94 1.1E-30 T 05-07-2017 AC028_RS14705 6e8a8071454acca3a89b6b6877eb6547 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 29.085 T 05-07-2017 IPR007551 Protein of unknown function DUF520 AC028_RS14705 6e8a8071454acca3a89b6b6877eb6547 161 SUPERFAMILY SSF89963 90 161 5.36E-27 T 05-07-2017 IPR007551 Protein of unknown function DUF520 AC028_RS14705 6e8a8071454acca3a89b6b6877eb6547 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 1.8E-61 T 05-07-2017 IPR007551 Protein of unknown function DUF520 AC028_RS14705 6e8a8071454acca3a89b6b6877eb6547 161 SUPERFAMILY SSF89963 2 85 5.75E-29 T 05-07-2017 IPR007551 Protein of unknown function DUF520 AC028_RS14705 6e8a8071454acca3a89b6b6877eb6547 161 Gene3D G3DSA:3.30.70.860 95 161 3.4E-31 T 05-07-2017 AC028_RS16080 aa281985a046a886332a932288a58877 255 SUPERFAMILY SSF53850 23 252 1.51E-39 T 05-07-2017 AC028_RS16080 aa281985a046a886332a932288a58877 255 Gene3D G3DSA:3.40.190.10 211 244 2.0E-16 T 05-07-2017 AC028_RS16080 aa281985a046a886332a932288a58877 255 Gene3D G3DSA:3.40.190.10 21 150 2.0E-16 T 05-07-2017 AC028_RS16080 aa281985a046a886332a932288a58877 255 Pfam PF13531 Bacterial extracellular solute-binding protein 24 249 9.8E-36 T 05-07-2017 AC028_RS07960 788e253065d248c666b6ee08e7ca7487 196 Gene3D G3DSA:3.40.30.10 67 191 8.1E-16 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS07960 788e253065d248c666b6ee08e7ca7487 196 Pfam PF13899 Thioredoxin-like 75 159 1.1E-11 T 05-07-2017 AC028_RS07960 788e253065d248c666b6ee08e7ca7487 196 SUPERFAMILY SSF52833 54 189 2.3E-18 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS20525 7dfde0ffb69f5dea334c9d6c191acf36 146 Pfam PF04386 Stringent starvation protein B 11 146 6.2E-34 T 05-07-2017 IPR007481 Stringent starvation protein B AC028_RS20525 7dfde0ffb69f5dea334c9d6c191acf36 146 SUPERFAMILY SSF101738 6 118 5.36E-45 T 05-07-2017 IPR007481 Stringent starvation protein B AC028_RS20525 7dfde0ffb69f5dea334c9d6c191acf36 146 Gene3D G3DSA:2.30.30.220 7 109 1.7E-44 T 05-07-2017 IPR007481 Stringent starvation protein B AC028_RS20525 7dfde0ffb69f5dea334c9d6c191acf36 146 PIRSF PIRSF005276 5 146 4.6E-54 T 05-07-2017 IPR007481 Stringent starvation protein B AC028_RS02265 a98d8868248555c982e2a5a43c329c2e 214 Gene3D G3DSA:3.40.50.1000 77 213 2.4E-41 T 05-07-2017 IPR023214 HAD-like domain AC028_RS02265 a98d8868248555c982e2a5a43c329c2e 214 SUPERFAMILY SSF56784 5 213 3.1E-52 T 05-07-2017 IPR023214 HAD-like domain AC028_RS02265 a98d8868248555c982e2a5a43c329c2e 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 184 2.8E-34 T 05-07-2017 IPR023214 HAD-like domain AC028_RS02265 a98d8868248555c982e2a5a43c329c2e 214 Gene3D G3DSA:1.10.150.240 17 76 1.4E-22 T 05-07-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 AC028_RS02050 85bf5e388ef662860d8baefe3c802fbc 350 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 05-07-2017 AC028_RS02050 85bf5e388ef662860d8baefe3c802fbc 350 SMART SM00354 12 82 4.6E-22 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS02050 85bf5e388ef662860d8baefe3c802fbc 350 SUPERFAMILY SSF47413 13 68 1.22E-15 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS02050 85bf5e388ef662860d8baefe3c802fbc 350 Pfam PF13377 Periplasmic binding protein-like domain 179 344 4.0E-39 T 05-07-2017 AC028_RS02050 85bf5e388ef662860d8baefe3c802fbc 350 SUPERFAMILY SSF53822 73 348 1.7E-69 T 05-07-2017 IPR028082 Periplasmic binding protein-like I AC028_RS02050 85bf5e388ef662860d8baefe3c802fbc 350 Gene3D G3DSA:3.40.50.2300 72 183 2.1E-29 T 05-07-2017 AC028_RS02050 85bf5e388ef662860d8baefe3c802fbc 350 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 7.0E-16 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS02050 85bf5e388ef662860d8baefe3c802fbc 350 Gene3D G3DSA:3.40.50.2300 184 320 6.2E-52 T 05-07-2017 AC028_RS02050 85bf5e388ef662860d8baefe3c802fbc 350 Gene3D G3DSA:1.10.260.40 12 68 1.1E-21 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS02915 3f6d29f9417194ee9a1b9e4558f3bece 460 Gene3D G3DSA:1.20.1600.10 18 434 1.0E-86 T 05-07-2017 AC028_RS02915 3f6d29f9417194ee9a1b9e4558f3bece 460 SUPERFAMILY SSF56954 23 446 1.44E-88 T 05-07-2017 AC028_RS02915 3f6d29f9417194ee9a1b9e4558f3bece 460 Pfam PF02321 Outer membrane efflux protein 235 431 1.6E-34 T 05-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AC028_RS02915 3f6d29f9417194ee9a1b9e4558f3bece 460 Pfam PF02321 Outer membrane efflux protein 24 210 9.0E-25 T 05-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AC028_RS02915 3f6d29f9417194ee9a1b9e4558f3bece 460 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 446 2.2E-131 T 05-07-2017 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AC028_RS15170 cc5ad6b8aac085722b5b5ae668884b0f 242 Pfam PF00106 short chain dehydrogenase 3 190 4.2E-31 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS15170 cc5ad6b8aac085722b5b5ae668884b0f 242 SUPERFAMILY SSF51735 3 240 2.23E-42 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS15170 cc5ad6b8aac085722b5b5ae668884b0f 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 05-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AC028_RS15170 cc5ad6b8aac085722b5b5ae668884b0f 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.0E-11 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS15170 cc5ad6b8aac085722b5b5ae668884b0f 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.0E-11 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS15170 cc5ad6b8aac085722b5b5ae668884b0f 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.0E-11 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS15170 cc5ad6b8aac085722b5b5ae668884b0f 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.0E-11 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS15170 cc5ad6b8aac085722b5b5ae668884b0f 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.0E-11 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS15170 cc5ad6b8aac085722b5b5ae668884b0f 242 Gene3D G3DSA:3.40.50.720 3 214 6.8E-39 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS19765 0e9312bb404fbc3892c1688e756de0ab 347 Gene3D G3DSA:3.75.10.10 5 344 2.2E-122 T 05-07-2017 AC028_RS19765 0e9312bb404fbc3892c1688e756de0ab 347 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 9 341 3.0E-108 T 05-07-2017 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AC028_RS19765 0e9312bb404fbc3892c1688e756de0ab 347 SUPERFAMILY SSF55909 4 342 4.28E-112 T 05-07-2017 AC028_RS16015 2ce6a516058f2183b2eef4f243e55ad9 461 TIGRFAM TIGR00784 citMHS: citrate transporter 20 456 1.9E-190 T 05-07-2017 IPR014738 Citrate transporter GO:0015137|GO:0015746 AC028_RS16015 2ce6a516058f2183b2eef4f243e55ad9 461 Pfam PF03600 Citrate transporter 32 405 2.5E-58 T 05-07-2017 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 AC028_RS06010 1fe4325c7a78940941a04ea3f763b934 365 Gene3D G3DSA:3.20.20.70 2 355 7.8E-118 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS06010 1fe4325c7a78940941a04ea3f763b934 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 337 1.8E-61 T 05-07-2017 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AC028_RS06010 1fe4325c7a78940941a04ea3f763b934 365 SUPERFAMILY SSF51395 2 358 1.16E-106 T 05-07-2017 AC028_RS12705 4b5fb5b40dd550bf16837f3ef567b1fe 472 SUPERFAMILY SSF56672 1 228 5.56E-29 T 05-07-2017 AC028_RS12705 4b5fb5b40dd550bf16837f3ef567b1fe 472 Pfam PF00817 impB/mucB/samB family 21 149 2.9E-7 T 05-07-2017 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AC028_RS15595 b03aa5eb0dc7404b49e74e6e0a7059e9 748 SUPERFAMILY SSF52279 381 580 1.7E-51 T 05-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AC028_RS15595 b03aa5eb0dc7404b49e74e6e0a7059e9 748 SUPERFAMILY SSF52279 611 633 1.7E-51 T 05-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AC028_RS15595 b03aa5eb0dc7404b49e74e6e0a7059e9 748 SMART SM01217 663 731 1.3E-15 T 05-07-2017 IPR026891 Fibronectin type III-like domain AC028_RS15595 b03aa5eb0dc7404b49e74e6e0a7059e9 748 SUPERFAMILY SSF51445 40 374 6.32E-84 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS15595 b03aa5eb0dc7404b49e74e6e0a7059e9 748 Gene3D G3DSA:3.20.20.300 40 360 2.1E-91 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS15595 b03aa5eb0dc7404b49e74e6e0a7059e9 748 Pfam PF14310 Fibronectin type III-like domain 664 730 1.3E-12 T 05-07-2017 IPR026891 Fibronectin type III-like domain AC028_RS15595 b03aa5eb0dc7404b49e74e6e0a7059e9 748 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 99 346 3.5E-38 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS15595 b03aa5eb0dc7404b49e74e6e0a7059e9 748 PRINTS PR00133 Glycosyl hydrolase family 3 signature 275 293 4.2E-27 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS15595 b03aa5eb0dc7404b49e74e6e0a7059e9 748 PRINTS PR00133 Glycosyl hydrolase family 3 signature 174 190 4.2E-27 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS15595 b03aa5eb0dc7404b49e74e6e0a7059e9 748 PRINTS PR00133 Glycosyl hydrolase family 3 signature 98 114 4.2E-27 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS15595 b03aa5eb0dc7404b49e74e6e0a7059e9 748 PRINTS PR00133 Glycosyl hydrolase family 3 signature 205 221 4.2E-27 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS15595 b03aa5eb0dc7404b49e74e6e0a7059e9 748 PRINTS PR00133 Glycosyl hydrolase family 3 signature 128 147 4.2E-27 T 05-07-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AC028_RS15595 b03aa5eb0dc7404b49e74e6e0a7059e9 748 Gene3D G3DSA:3.40.50.1700 372 633 7.7E-67 T 05-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AC028_RS15595 b03aa5eb0dc7404b49e74e6e0a7059e9 748 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 381 630 5.2E-57 T 05-07-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AC028_RS01160 435493d986c046a60ccf9f9aa3577ecf 395 PIRSF PIRSF036592 1 395 1.2E-221 T 05-07-2017 IPR012071 Chemotaxis glutamate methyltransferase AC028_RS01160 435493d986c046a60ccf9f9aa3577ecf 395 Pfam PF01339 CheB methylesterase 226 368 8.7E-11 T 05-07-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AC028_RS01160 435493d986c046a60ccf9f9aa3577ecf 395 Gene3D G3DSA:3.40.50.180 225 391 7.2E-15 T 05-07-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AC028_RS01160 435493d986c046a60ccf9f9aa3577ecf 395 SUPERFAMILY SSF52738 221 393 4.05E-22 T 05-07-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AC028_RS22420 d86ea457ee572986ddd7c9fb791feb0b 288 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 40 256 1.8E-39 T 05-07-2017 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 AC028_RS16040 dd121d86aa422d3e08bd9076b12ab191 349 Gene3D G3DSA:3.40.190.10 142 286 3.6E-57 T 05-07-2017 AC028_RS16040 dd121d86aa422d3e08bd9076b12ab191 349 Pfam PF13531 Bacterial extracellular solute-binding protein 46 294 2.9E-19 T 05-07-2017 AC028_RS16040 dd121d86aa422d3e08bd9076b12ab191 349 Gene3D G3DSA:3.40.190.10 1 141 4.3E-30 T 05-07-2017 AC028_RS16040 dd121d86aa422d3e08bd9076b12ab191 349 SUPERFAMILY SSF53850 36 309 1.36E-42 T 05-07-2017 AC028_RS18440 a0404b18f66736544b42c1d9201e8830 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 268 294 9.1E-66 T 05-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AC028_RS18440 a0404b18f66736544b42c1d9201e8830 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 1 17 9.1E-66 T 05-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AC028_RS18440 a0404b18f66736544b42c1d9201e8830 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 191 216 9.1E-66 T 05-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AC028_RS18440 a0404b18f66736544b42c1d9201e8830 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 110 133 9.1E-66 T 05-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AC028_RS18440 a0404b18f66736544b42c1d9201e8830 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 244 264 9.1E-66 T 05-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AC028_RS18440 a0404b18f66736544b42c1d9201e8830 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 222 242 9.1E-66 T 05-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AC028_RS18440 a0404b18f66736544b42c1d9201e8830 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 30 56 9.1E-66 T 05-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AC028_RS18440 a0404b18f66736544b42c1d9201e8830 329 Pfam PF14841 FliG middle domain 111 184 2.2E-26 T 05-07-2017 IPR032779 Flagellar motor switch protein FliG, middle domain AC028_RS18440 a0404b18f66736544b42c1d9201e8830 329 Gene3D G3DSA:1.10.220.30 100 187 7.3E-31 T 05-07-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical AC028_RS18440 a0404b18f66736544b42c1d9201e8830 329 Gene3D G3DSA:1.10.220.30 3 67 9.0E-19 T 05-07-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical AC028_RS18440 a0404b18f66736544b42c1d9201e8830 329 Pfam PF01706 FliG C-terminal domain 215 320 3.2E-39 T 05-07-2017 IPR023087 Flagellar motor switch protein FliG, C-terminal AC028_RS18440 a0404b18f66736544b42c1d9201e8830 329 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 1 323 7.5E-103 T 05-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AC028_RS18440 a0404b18f66736544b42c1d9201e8830 329 Pfam PF14842 FliG N-terminal domain 1 101 4.7E-33 T 05-07-2017 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AC028_RS18440 a0404b18f66736544b42c1d9201e8830 329 PIRSF PIRSF003161 1 329 1.9E-119 T 05-07-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AC028_RS18440 a0404b18f66736544b42c1d9201e8830 329 Gene3D G3DSA:1.10.220.30 191 328 2.5E-39 T 05-07-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical AC028_RS18440 a0404b18f66736544b42c1d9201e8830 329 SUPERFAMILY SSF48029 2 113 3.92E-25 T 05-07-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical AC028_RS18440 a0404b18f66736544b42c1d9201e8830 329 SUPERFAMILY SSF48029 110 321 1.44E-67 T 05-07-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical AC028_RS00355 64a8a3bc1afda8e4bbd6c3c39c0305d9 252 Gene3D G3DSA:1.25.40.10 17 219 1.4E-43 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS00355 64a8a3bc1afda8e4bbd6c3c39c0305d9 252 SUPERFAMILY SSF81901 17 211 2.75E-42 T 05-07-2017 AC028_RS00355 64a8a3bc1afda8e4bbd6c3c39c0305d9 252 Pfam PF08238 Sel1 repeat 71 105 4.6E-7 T 05-07-2017 IPR006597 Sel1-like repeat AC028_RS00355 64a8a3bc1afda8e4bbd6c3c39c0305d9 252 Pfam PF08238 Sel1 repeat 110 142 6.1E-7 T 05-07-2017 IPR006597 Sel1-like repeat AC028_RS00355 64a8a3bc1afda8e4bbd6c3c39c0305d9 252 Pfam PF08238 Sel1 repeat 37 69 8.3E-5 T 05-07-2017 IPR006597 Sel1-like repeat AC028_RS00355 64a8a3bc1afda8e4bbd6c3c39c0305d9 252 Pfam PF08238 Sel1 repeat 143 178 0.0073 T 05-07-2017 IPR006597 Sel1-like repeat AC028_RS00355 64a8a3bc1afda8e4bbd6c3c39c0305d9 252 Pfam PF08238 Sel1 repeat 196 210 55.0 T 05-07-2017 IPR006597 Sel1-like repeat AC028_RS00355 64a8a3bc1afda8e4bbd6c3c39c0305d9 252 SMART SM00671 107 142 2.2E-7 T 05-07-2017 IPR006597 Sel1-like repeat AC028_RS00355 64a8a3bc1afda8e4bbd6c3c39c0305d9 252 SMART SM00671 143 178 0.0018 T 05-07-2017 IPR006597 Sel1-like repeat AC028_RS00355 64a8a3bc1afda8e4bbd6c3c39c0305d9 252 SMART SM00671 35 70 4.8E-6 T 05-07-2017 IPR006597 Sel1-like repeat AC028_RS00355 64a8a3bc1afda8e4bbd6c3c39c0305d9 252 SMART SM00671 71 106 8.8E-8 T 05-07-2017 IPR006597 Sel1-like repeat AC028_RS06465 977b0389c94d6c23fa862b4c4928a469 506 SUPERFAMILY SSF51905 326 421 1.41E-26 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS06465 977b0389c94d6c23fa862b4c4928a469 506 SUPERFAMILY SSF51905 8 90 1.41E-26 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS06465 977b0389c94d6c23fa862b4c4928a469 506 SUPERFAMILY SSF51905 147 241 1.41E-26 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS06465 977b0389c94d6c23fa862b4c4928a469 506 PIRSF PIRSF011396 1 504 1.0E-196 T 05-07-2017 IPR006905 Tryptophan halogenase AC028_RS06465 977b0389c94d6c23fa862b4c4928a469 506 Pfam PF04820 Tryptophan halogenase 8 468 3.2E-199 T 05-07-2017 IPR006905 Tryptophan halogenase AC028_RS06465 977b0389c94d6c23fa862b4c4928a469 506 Gene3D G3DSA:3.50.50.60 8 75 3.7E-48 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS06465 977b0389c94d6c23fa862b4c4928a469 506 Gene3D G3DSA:3.50.50.60 321 365 3.7E-48 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS06465 977b0389c94d6c23fa862b4c4928a469 506 Gene3D G3DSA:3.50.50.60 159 239 3.7E-48 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS21500 9d9db50e9b6cc82e5b03d0af21b6e201 167 SMART SM01001 8 159 8.0E-99 T 05-07-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AC028_RS21500 9d9db50e9b6cc82e5b03d0af21b6e201 167 Pfam PF00731 AIR carboxylase 10 157 4.1E-62 T 05-07-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AC028_RS21500 9d9db50e9b6cc82e5b03d0af21b6e201 167 SUPERFAMILY SSF52255 9 165 8.63E-65 T 05-07-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AC028_RS21500 9d9db50e9b6cc82e5b03d0af21b6e201 167 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 32.107 T 05-07-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AC028_RS21500 9d9db50e9b6cc82e5b03d0af21b6e201 167 PIRSF PIRSF001338 5 167 5.2E-66 T 05-07-2017 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 AC028_RS21500 9d9db50e9b6cc82e5b03d0af21b6e201 167 Gene3D G3DSA:3.40.50.7700 3 164 6.0E-73 T 05-07-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AC028_RS21500 9d9db50e9b6cc82e5b03d0af21b6e201 167 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 164 6.6E-64 T 05-07-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 Gene3D G3DSA:2.150.10.10 423 571 1.8E-24 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 Gene3D G3DSA:2.150.10.10 271 356 1.5E-10 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 Gene3D G3DSA:2.150.10.10 167 230 9.0E-16 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 PRINTS PR00313 NodO calcium binding signature 466 474 1.6E-10 T 05-07-2017 AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 PRINTS PR00313 NodO calcium binding signature 484 493 1.6E-10 T 05-07-2017 AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 PRINTS PR00313 NodO calcium binding signature 305 313 1.6E-10 T 05-07-2017 AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 PRINTS PR00313 NodO calcium binding signature 173 184 1.6E-10 T 05-07-2017 AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 462 480 - T 05-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 SUPERFAMILY SSF51120 252 353 1.14E-11 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 310 328 - T 05-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 Pfam PF06594 Haemolysin-type calcium binding protein related domain 115 152 5.7E-7 T 05-07-2017 IPR010566 Haemolysin-type calcium binding-related AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 471 489 - T 05-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 305 321 0.089 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 184 201 0.014 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 456 473 0.0029 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 272 288 47.0 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 439 455 66.0 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 166 183 1.9 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 322 338 0.31 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 203 218 0.026 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 474 490 0.0043 T 05-07-2017 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 190 208 - T 05-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 453 471 - T 05-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 SUPERFAMILY SSF51120 414 556 4.58E-24 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS15960 b91162cadfd54aac5c57d927526d4a57 616 SUPERFAMILY SSF51120 160 236 2.49E-17 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS17530 3704dc37568d098b958dfc37cf53e483 751 SUPERFAMILY SSF110296 47 428 2.35E-75 T 05-07-2017 AC028_RS17530 3704dc37568d098b958dfc37cf53e483 751 Gene3D G3DSA:2.130.10.140 515 750 2.5E-51 T 05-07-2017 AC028_RS17530 3704dc37568d098b958dfc37cf53e483 751 Gene3D G3DSA:2.130.10.140 56 471 3.4E-76 T 05-07-2017 AC028_RS17530 3704dc37568d098b958dfc37cf53e483 751 SUPERFAMILY SSF110296 435 749 8.63E-35 T 05-07-2017 AC028_RS00315 c029034d9b280d539d81a8410af71cf6 485 SUPERFAMILY SSF101960 41 482 1.96E-137 T 05-07-2017 AC028_RS00315 c029034d9b280d539d81a8410af71cf6 485 Pfam PF01458 Uncharacterized protein family (UPF0051) 223 456 5.7E-67 T 05-07-2017 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AC028_RS00315 c029034d9b280d539d81a8410af71cf6 485 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 21 476 8.6E-194 T 05-07-2017 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 AC028_RS02780 33d54b4c811c450eb75da64f13a78b20 187 SUPERFAMILY SSF52540 1 186 2.47E-40 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02780 33d54b4c811c450eb75da64f13a78b20 187 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 05-07-2017 AC028_RS02780 33d54b4c811c450eb75da64f13a78b20 187 Hamap MF_00235 Adenylate kinase [adk]. 1 186 47.446 T 05-07-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AC028_RS02780 33d54b4c811c450eb75da64f13a78b20 187 Gene3D G3DSA:3.40.50.300 1 184 8.3E-65 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02780 33d54b4c811c450eb75da64f13a78b20 187 PRINTS PR00094 Adenylate kinase signature 133 148 2.8E-36 T 05-07-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AC028_RS02780 33d54b4c811c450eb75da64f13a78b20 187 PRINTS PR00094 Adenylate kinase signature 4 17 2.8E-36 T 05-07-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AC028_RS02780 33d54b4c811c450eb75da64f13a78b20 187 PRINTS PR00094 Adenylate kinase signature 81 97 2.8E-36 T 05-07-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AC028_RS02780 33d54b4c811c450eb75da64f13a78b20 187 PRINTS PR00094 Adenylate kinase signature 32 46 2.8E-36 T 05-07-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AC028_RS02780 33d54b4c811c450eb75da64f13a78b20 187 PRINTS PR00094 Adenylate kinase signature 150 164 2.8E-36 T 05-07-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AC028_RS02780 33d54b4c811c450eb75da64f13a78b20 187 Pfam PF00406 Adenylate kinase 5 163 3.5E-56 T 05-07-2017 AC028_RS09745 15ef2148e6add66c4c8966c6d3dd489f 313 SUPERFAMILY SSF55781 30 173 2.4E-22 T 05-07-2017 IPR029016 GAF domain-like AC028_RS09745 15ef2148e6add66c4c8966c6d3dd489f 313 SMART SM00065 29 172 8.9E-5 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS09745 15ef2148e6add66c4c8966c6d3dd489f 313 Gene3D G3DSA:3.30.450.40 31 163 8.8E-10 T 05-07-2017 IPR029016 GAF domain-like AC028_RS09620 793c3ed6c0d5ce9bf01636905dad4fa8 105 Pfam PF12823 Domain of unknown function (DUF3817) 7 93 1.4E-17 T 05-07-2017 IPR023845 Domain of unknown function DUF3817, transmembrane AC028_RS09620 793c3ed6c0d5ce9bf01636905dad4fa8 105 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 8 91 3.5E-19 T 05-07-2017 IPR023845 Domain of unknown function DUF3817, transmembrane AC028_RS04285 6ce87d17585d02589b16222b9e44078e 558 SUPERFAMILY SSF53187 35 81 1.22E-62 T 05-07-2017 AC028_RS04285 6ce87d17585d02589b16222b9e44078e 558 SUPERFAMILY SSF53187 291 534 1.22E-62 T 05-07-2017 AC028_RS04285 6ce87d17585d02589b16222b9e44078e 558 Gene3D G3DSA:3.50.30.30 136 218 4.9E-5 T 05-07-2017 AC028_RS04285 6ce87d17585d02589b16222b9e44078e 558 Gene3D G3DSA:3.40.630.10 304 540 1.2E-57 T 05-07-2017 AC028_RS04285 6ce87d17585d02589b16222b9e44078e 558 Gene3D G3DSA:3.40.630.10 31 88 1.2E-57 T 05-07-2017 AC028_RS04285 6ce87d17585d02589b16222b9e44078e 558 Pfam PF02225 PA domain 137 236 9.9E-8 T 05-07-2017 IPR003137 PA domain AC028_RS04285 6ce87d17585d02589b16222b9e44078e 558 Pfam PF04389 Peptidase family M28 308 523 1.5E-47 T 05-07-2017 IPR007484 Peptidase M28 AC028_RS04285 6ce87d17585d02589b16222b9e44078e 558 SUPERFAMILY SSF52025 136 222 3.14E-9 T 05-07-2017 AC028_RS21590 eb429e4d050d691e4b861874cabc77b9 363 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 24 357 23.992 T 05-07-2017 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21590 eb429e4d050d691e4b861874cabc77b9 363 Pfam PF00146 NADH dehydrogenase 31 351 4.8E-117 T 05-07-2017 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21590 eb429e4d050d691e4b861874cabc77b9 363 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 229 242 - T 05-07-2017 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS20410 27f6bf814fff9e09fb47d31de2adb95b 575 Pfam PF11741 AMIN domain 45 119 3.5E-12 T 05-07-2017 IPR021731 AMIN domain AC028_RS20410 27f6bf814fff9e09fb47d31de2adb95b 575 SUPERFAMILY SSF53187 470 546 1.95E-52 T 05-07-2017 AC028_RS20410 27f6bf814fff9e09fb47d31de2adb95b 575 SUPERFAMILY SSF53187 326 422 1.95E-52 T 05-07-2017 AC028_RS20410 27f6bf814fff9e09fb47d31de2adb95b 575 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 328 543 5.7E-48 T 05-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AC028_RS20410 27f6bf814fff9e09fb47d31de2adb95b 575 SMART SM00646 388 543 6.0E-64 T 05-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AC028_RS20410 27f6bf814fff9e09fb47d31de2adb95b 575 Gene3D G3DSA:3.40.630.40 471 546 2.0E-57 T 05-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AC028_RS20410 27f6bf814fff9e09fb47d31de2adb95b 575 Gene3D G3DSA:3.40.630.40 327 423 2.0E-57 T 05-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AC028_RS06145 a1d46e70d71ec5cc275a278219c21ff8 453 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 89 411 8.0E-25 T 05-07-2017 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 AC028_RS06145 a1d46e70d71ec5cc275a278219c21ff8 453 Gene3D G3DSA:3.20.20.80 216 436 1.3E-66 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS06145 a1d46e70d71ec5cc275a278219c21ff8 453 Gene3D G3DSA:3.20.20.80 57 148 1.3E-66 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS06145 a1d46e70d71ec5cc275a278219c21ff8 453 SUPERFAMILY SSF51445 58 148 3.94E-46 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS06145 a1d46e70d71ec5cc275a278219c21ff8 453 SUPERFAMILY SSF51445 216 418 3.94E-46 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS06145 a1d46e70d71ec5cc275a278219c21ff8 453 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 244 253 - T 05-07-2017 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 AC028_RS08310 c77542deec671b190371039cb08c708f 90 PRINTS PR01591 DNA-binding protein FIS signature 18 34 1.0E-8 T 05-07-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AC028_RS08310 c77542deec671b190371039cb08c708f 90 PRINTS PR01591 DNA-binding protein FIS signature 34 49 1.0E-8 T 05-07-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AC028_RS08310 c77542deec671b190371039cb08c708f 90 PRINTS PR01591 DNA-binding protein FIS signature 49 61 1.0E-8 T 05-07-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AC028_RS08310 c77542deec671b190371039cb08c708f 90 SUPERFAMILY SSF46689 10 89 3.81E-23 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS08310 c77542deec671b190371039cb08c708f 90 Pfam PF02954 Bacterial regulatory protein, Fis family 47 87 4.3E-14 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS08310 c77542deec671b190371039cb08c708f 90 Gene3D G3DSA:1.10.10.60 19 89 4.3E-26 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS08310 c77542deec671b190371039cb08c708f 90 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 53 70 3.7E-12 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS08310 c77542deec671b190371039cb08c708f 90 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 70 90 3.7E-12 T 05-07-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AC028_RS08310 c77542deec671b190371039cb08c708f 90 PIRSF PIRSF002097 2 90 8.6E-35 T 05-07-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AC028_RS20135 df2e4ef0973b3490f8d65822645346b4 413 TIGRFAM TIGR00032 argG: argininosuccinate synthase 22 411 7.0E-81 T 05-07-2017 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AC028_RS20135 df2e4ef0973b3490f8d65822645346b4 413 Gene3D G3DSA:3.40.50.620 17 191 5.7E-39 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS20135 df2e4ef0973b3490f8d65822645346b4 413 SUPERFAMILY SSF52402 20 201 3.09E-34 T 05-07-2017 AC028_RS20135 df2e4ef0973b3490f8d65822645346b4 413 Pfam PF00764 Arginosuccinate synthase 23 408 1.4E-82 T 05-07-2017 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AC028_RS20135 df2e4ef0973b3490f8d65822645346b4 413 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 25 33 - T 05-07-2017 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AC028_RS20135 df2e4ef0973b3490f8d65822645346b4 413 SUPERFAMILY SSF69864 191 412 1.44E-55 T 05-07-2017 AC028_RS20135 df2e4ef0973b3490f8d65822645346b4 413 Hamap MF_00005 Argininosuccinate synthase [argG]. 19 413 39.587 T 05-07-2017 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AC028_RS20135 df2e4ef0973b3490f8d65822645346b4 413 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 133 144 - T 05-07-2017 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AC028_RS20135 df2e4ef0973b3490f8d65822645346b4 413 Gene3D G3DSA:3.90.1260.10 192 412 2.6E-54 T 05-07-2017 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AC028_RS01410 a39ddc7ffc6d713839a3bd736b00ffc4 149 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 138 1.4E-27 T 05-07-2017 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AC028_RS01410 a39ddc7ffc6d713839a3bd736b00ffc4 149 TIGRFAM TIGR02801 tolR: protein TolR 14 138 4.0E-40 T 05-07-2017 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 AC028_RS11265 3cc783323badb15d86f65602524c141e 636 Gene3D G3DSA:3.30.565.10 341 498 8.8E-44 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS11265 3cc783323badb15d86f65602524c141e 636 Pfam PF00512 His Kinase A (phospho-acceptor) domain 275 339 1.0E-14 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS11265 3cc783323badb15d86f65602524c141e 636 Gene3D G3DSA:1.10.287.130 268 336 2.1E-16 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS11265 3cc783323badb15d86f65602524c141e 636 Pfam PF00672 HAMP domain 191 253 3.1E-6 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS11265 3cc783323badb15d86f65602524c141e 636 SUPERFAMILY SSF47384 263 341 3.53E-20 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS11265 3cc783323badb15d86f65602524c141e 636 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 387 494 1.8E-24 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS11265 3cc783323badb15d86f65602524c141e 636 Pfam PF05227 CHASE3 domain 46 176 1.5E-21 T 05-07-2017 IPR007891 CHASE3 AC028_RS11265 3cc783323badb15d86f65602524c141e 636 SUPERFAMILY SSF52172 518 635 1.57E-25 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS11265 3cc783323badb15d86f65602524c141e 636 SMART SM00388 275 340 2.7E-19 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS11265 3cc783323badb15d86f65602524c141e 636 SMART SM00387 386 496 8.5E-38 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS11265 3cc783323badb15d86f65602524c141e 636 SMART SM00448 517 631 1.2E-19 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS11265 3cc783323badb15d86f65602524c141e 636 Pfam PF00072 Response regulator receiver domain 520 631 1.0E-16 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS11265 3cc783323badb15d86f65602524c141e 636 Gene3D G3DSA:3.40.50.2300 518 635 3.9E-26 T 05-07-2017 AC028_RS11265 3cc783323badb15d86f65602524c141e 636 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 451 8.6E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS11265 3cc783323badb15d86f65602524c141e 636 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 493 8.6E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS11265 3cc783323badb15d86f65602524c141e 636 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 475 8.6E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS11265 3cc783323badb15d86f65602524c141e 636 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 437 8.6E-15 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS11265 3cc783323badb15d86f65602524c141e 636 SUPERFAMILY SSF55874 330 494 9.3E-44 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS19785 872ef0b1155d2ba9fd392067a57dd615 253 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 236 5.3E-26 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS19785 872ef0b1155d2ba9fd392067a57dd615 253 SUPERFAMILY SSF56219 1 244 6.67E-40 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS19785 872ef0b1155d2ba9fd392067a57dd615 253 Gene3D G3DSA:3.60.10.10 1 244 3.4E-24 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS05930 3ba86cafe98c8a036bdbac8d6ee36c49 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 395 410 1.1E-23 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS05930 3ba86cafe98c8a036bdbac8d6ee36c49 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 120 139 1.1E-23 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS05930 3ba86cafe98c8a036bdbac8d6ee36c49 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 32 57 1.1E-23 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS05930 3ba86cafe98c8a036bdbac8d6ee36c49 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 364 382 1.1E-23 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS05930 3ba86cafe98c8a036bdbac8d6ee36c49 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 101 119 1.1E-23 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS05930 3ba86cafe98c8a036bdbac8d6ee36c49 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 219 235 1.1E-23 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS05930 3ba86cafe98c8a036bdbac8d6ee36c49 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 340 358 1.1E-23 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS05930 3ba86cafe98c8a036bdbac8d6ee36c49 526 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 248 267 1.1E-23 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS05930 3ba86cafe98c8a036bdbac8d6ee36c49 526 Pfam PF01019 Gamma-glutamyltranspeptidase 25 521 4.2E-127 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS05930 3ba86cafe98c8a036bdbac8d6ee36c49 526 SUPERFAMILY SSF56235 3 526 4.82E-149 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS17525 6e9c624839e887023b1e2b95f476c76b 906 Pfam PF00593 TonB dependent receptor 629 904 4.5E-32 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS17525 6e9c624839e887023b1e2b95f476c76b 906 Gene3D G3DSA:2.40.170.20 563 904 7.1E-62 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS17525 6e9c624839e887023b1e2b95f476c76b 906 Gene3D G3DSA:2.40.170.20 437 509 7.1E-62 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS17525 6e9c624839e887023b1e2b95f476c76b 906 Gene3D G3DSA:2.40.170.20 280 396 7.1E-62 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS17525 6e9c624839e887023b1e2b95f476c76b 906 Gene3D G3DSA:2.40.170.20 183 247 7.1E-62 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS17525 6e9c624839e887023b1e2b95f476c76b 906 Gene3D G3DSA:2.170.130.10 51 182 1.0E-15 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS17525 6e9c624839e887023b1e2b95f476c76b 906 SUPERFAMILY SSF56935 531 905 3.97E-89 T 05-07-2017 AC028_RS17525 6e9c624839e887023b1e2b95f476c76b 906 SUPERFAMILY SSF56935 50 248 3.97E-89 T 05-07-2017 AC028_RS17525 6e9c624839e887023b1e2b95f476c76b 906 SUPERFAMILY SSF56935 281 492 3.97E-89 T 05-07-2017 AC028_RS17525 6e9c624839e887023b1e2b95f476c76b 906 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 67 - T 05-07-2017 IPR010916 TonB box, conserved site AC028_RS17525 6e9c624839e887023b1e2b95f476c76b 906 Pfam PF07715 TonB-dependent Receptor Plug Domain 78 179 2.0E-12 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS17525 6e9c624839e887023b1e2b95f476c76b 906 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 59 905 1.6E-258 T 05-07-2017 IPR010104 Bacterial TonB-dependent receptor AC028_RS03435 68fbf073508e6a1d9e53c784af36af4b 97 SMART SM00530 10 63 5.3E-6 T 05-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AC028_RS03435 68fbf073508e6a1d9e53c784af36af4b 97 SUPERFAMILY SSF47413 5 66 5.35E-11 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS03435 68fbf073508e6a1d9e53c784af36af4b 97 Pfam PF13560 Helix-turn-helix domain 7 60 5.4E-7 T 05-07-2017 AC028_RS03435 68fbf073508e6a1d9e53c784af36af4b 97 Gene3D G3DSA:1.10.260.40 6 68 8.6E-13 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS15730 92648a576a28dd0812b5797cd9cd9f9a 209 Gene3D G3DSA:3.40.30.10 5 86 4.5E-25 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS15730 92648a576a28dd0812b5797cd9cd9f9a 209 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 79 2.0E-16 T 05-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AC028_RS15730 92648a576a28dd0812b5797cd9cd9f9a 209 SUPERFAMILY SSF52833 4 100 1.08E-21 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS15730 92648a576a28dd0812b5797cd9cd9f9a 209 SUPERFAMILY SSF47616 80 200 2.73E-28 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS15730 92648a576a28dd0812b5797cd9cd9f9a 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 120 196 4.2E-10 T 05-07-2017 IPR004046 Glutathione S-transferase, C-terminal AC028_RS15730 92648a576a28dd0812b5797cd9cd9f9a 209 Gene3D G3DSA:1.20.1050.10 87 202 2.0E-31 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS03955 fc18634c05d5c16e4e6673e536a01a56 266 SUPERFAMILY SSF51306 61 250 1.83E-60 T 05-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C AC028_RS03955 fc18634c05d5c16e4e6673e536a01a56 266 ProSitePatterns PS00761 Signal peptidases I signature 3. 209 222 - T 05-07-2017 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AC028_RS03955 fc18634c05d5c16e4e6673e536a01a56 266 ProSitePatterns PS00760 Signal peptidases I lysine active site. 129 141 - T 05-07-2017 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AC028_RS03955 fc18634c05d5c16e4e6673e536a01a56 266 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 49 246 4.2E-45 T 05-07-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AC028_RS03955 fc18634c05d5c16e4e6673e536a01a56 266 Gene3D G3DSA:2.10.109.10 204 249 1.3E-49 T 05-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AC028_RS03955 fc18634c05d5c16e4e6673e536a01a56 266 Gene3D G3DSA:2.10.109.10 60 137 1.3E-49 T 05-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AC028_RS03955 fc18634c05d5c16e4e6673e536a01a56 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 63 79 1.2E-22 T 05-07-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AC028_RS03955 fc18634c05d5c16e4e6673e536a01a56 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 204 223 1.2E-22 T 05-07-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AC028_RS03955 fc18634c05d5c16e4e6673e536a01a56 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 127 139 1.2E-22 T 05-07-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AC028_RS03955 fc18634c05d5c16e4e6673e536a01a56 266 Pfam PF00717 Peptidase S24-like 69 151 5.6E-22 T 05-07-2017 IPR019759 Peptidase S24/S26A/S26B AC028_RS07705 c7b132bd29feb059f460990ecb9c785b 223 SUPERFAMILY SSF89562 22 183 2.62E-48 T 05-07-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AC028_RS07705 c7b132bd29feb059f460990ecb9c785b 223 TIGRFAM TIGR02798 ligK_PcmE: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 4 223 5.4E-113 T 05-07-2017 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase KEGG: 00362+4.1.3.17|KEGG: 00660+4.1.3.17|MetaCyc: PWY-7701 AC028_RS07705 c7b132bd29feb059f460990ecb9c785b 223 Gene3D G3DSA:3.50.30.40 23 179 2.7E-47 T 05-07-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AC028_RS07705 c7b132bd29feb059f460990ecb9c785b 223 Pfam PF03737 Demethylmenaquinone methyltransferase 25 172 1.9E-39 T 05-07-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AC028_RS00005 eda45d6d90cc8f7846d55a9497d8cad0 200 SUPERFAMILY SSF141868 168 200 4.18E-6 T 05-07-2017 IPR001633 EAL domain AC028_RS00005 eda45d6d90cc8f7846d55a9497d8cad0 200 Pfam PF00072 Response regulator receiver domain 22 138 1.0E-17 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS00005 eda45d6d90cc8f7846d55a9497d8cad0 200 Gene3D G3DSA:3.20.20.450 167 200 5.0E-6 T 05-07-2017 IPR001633 EAL domain AC028_RS00005 eda45d6d90cc8f7846d55a9497d8cad0 200 Gene3D G3DSA:3.40.50.2300 22 139 3.7E-21 T 05-07-2017 AC028_RS00005 eda45d6d90cc8f7846d55a9497d8cad0 200 SMART SM00448 20 138 2.9E-13 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS00005 eda45d6d90cc8f7846d55a9497d8cad0 200 SUPERFAMILY SSF52172 22 139 1.27E-21 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 Gene3D G3DSA:1.10.287.560 288 348 4.8E-14 T 05-07-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 SMART SM01231 287 347 1.3E-13 T 05-07-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 Pfam PF01584 CheW-like domain 539 659 3.4E-22 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 Pfam PF01627 Hpt domain 5 98 8.2E-17 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 SUPERFAMILY SSF50341 532 657 3.53E-28 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 Gene3D G3DSA:2.30.30.40 613 657 1.5E-18 T 05-07-2017 AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 Gene3D G3DSA:2.30.30.40 533 554 1.5E-18 T 05-07-2017 AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 451 2.4E-13 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 487 2.4E-13 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 511 2.4E-13 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 530 2.4E-13 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 SUPERFAMILY SSF47384 288 348 1.65E-10 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 288 343 1.1E-8 T 05-07-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 SUPERFAMILY SSF55874 349 531 7.73E-37 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 SMART SM00073 3 100 1.9E-25 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 Gene3D G3DSA:3.30.565.10 349 532 3.1E-33 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 SUPERFAMILY SSF47226 2 126 5.36E-29 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 Gene3D G3DSA:1.20.120.160 1 141 1.5E-35 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 SMART SM00387 392 533 2.6E-23 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 Gene3D G3DSA:2.40.50.180 568 612 1.1E-11 T 05-07-2017 AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 SMART SM00260 525 657 6.0E-25 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS22245 e7b6b063e164328a11577c2e14c1cdb4 669 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 532 1.1E-15 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS02680 6f3f400c5b1969f16881c6b4c29ebdb4 607 SUPERFAMILY SSF49452 22 101 1.45E-7 T 05-07-2017 IPR013784 Carbohydrate-binding-like fold GO:0030246 AC028_RS02680 6f3f400c5b1969f16881c6b4c29ebdb4 607 SUPERFAMILY SSF56935 105 255 3.02E-46 T 05-07-2017 AC028_RS02680 6f3f400c5b1969f16881c6b4c29ebdb4 607 SUPERFAMILY SSF56935 554 606 3.02E-46 T 05-07-2017 AC028_RS02680 6f3f400c5b1969f16881c6b4c29ebdb4 607 SUPERFAMILY SSF56935 299 522 3.02E-46 T 05-07-2017 AC028_RS02680 6f3f400c5b1969f16881c6b4c29ebdb4 607 Gene3D G3DSA:2.40.170.20 586 606 1.9E-23 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02680 6f3f400c5b1969f16881c6b4c29ebdb4 607 Gene3D G3DSA:2.40.170.20 241 539 1.9E-23 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02680 6f3f400c5b1969f16881c6b4c29ebdb4 607 Pfam PF13620 Carboxypeptidase regulatory-like domain 28 102 1.6E-8 T 05-07-2017 AC028_RS02680 6f3f400c5b1969f16881c6b4c29ebdb4 607 Pfam PF07715 TonB-dependent Receptor Plug Domain 132 235 7.4E-10 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS02680 6f3f400c5b1969f16881c6b4c29ebdb4 607 Gene3D G3DSA:2.60.40.1120 40 102 1.5E-4 T 05-07-2017 IPR014766 Carboxypeptidase, regulatory domain AC028_RS02680 6f3f400c5b1969f16881c6b4c29ebdb4 607 Gene3D G3DSA:2.170.130.10 108 240 2.9E-14 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS08905 ab5057a495efe11715e7e9a543af3249 402 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 79 5.5E-35 T 05-07-2017 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AC028_RS08905 ab5057a495efe11715e7e9a543af3249 402 Pfam PF07055 Enoyl reductase FAD binding domain 327 390 1.8E-31 T 05-07-2017 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AC028_RS08905 ab5057a495efe11715e7e9a543af3249 402 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 318 5.5E-109 T 05-07-2017 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AC028_RS08905 ab5057a495efe11715e7e9a543af3249 402 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 396 56.414 T 05-07-2017 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AC028_RS08905 ab5057a495efe11715e7e9a543af3249 402 Gene3D G3DSA:3.40.50.720 178 265 6.4E-5 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS08905 ab5057a495efe11715e7e9a543af3249 402 Gene3D G3DSA:3.40.50.720 42 145 6.4E-5 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS09785 cea170d2012161bc862aa1b7cf653d11 549 Gene3D G3DSA:3.40.630.10 283 531 2.7E-60 T 05-07-2017 AC028_RS09785 cea170d2012161bc862aa1b7cf653d11 549 Gene3D G3DSA:3.40.630.10 21 76 2.7E-60 T 05-07-2017 AC028_RS09785 cea170d2012161bc862aa1b7cf653d11 549 SUPERFAMILY SSF53187 22 70 1.3E-61 T 05-07-2017 AC028_RS09785 cea170d2012161bc862aa1b7cf653d11 549 SUPERFAMILY SSF53187 282 526 1.3E-61 T 05-07-2017 AC028_RS09785 cea170d2012161bc862aa1b7cf653d11 549 Pfam PF02225 PA domain 130 216 1.8E-5 T 05-07-2017 IPR003137 PA domain AC028_RS09785 cea170d2012161bc862aa1b7cf653d11 549 SUPERFAMILY SSF52025 119 217 3.27E-8 T 05-07-2017 AC028_RS09785 cea170d2012161bc862aa1b7cf653d11 549 Pfam PF04389 Peptidase family M28 298 508 8.7E-49 T 05-07-2017 IPR007484 Peptidase M28 AC028_RS16190 4a4cd96214bf4bd7e7a80560e8b90a8a 197 Hamap MF_01151 Protein GrpE [grpE]. 28 195 19.515 T 05-07-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AC028_RS16190 4a4cd96214bf4bd7e7a80560e8b90a8a 197 SUPERFAMILY SSF51064 141 196 2.35E-18 T 05-07-2017 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AC028_RS16190 4a4cd96214bf4bd7e7a80560e8b90a8a 197 Gene3D G3DSA:3.90.20.20 43 134 1.6E-25 T 05-07-2017 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AC028_RS16190 4a4cd96214bf4bd7e7a80560e8b90a8a 197 Gene3D G3DSA:2.30.22.10 139 196 1.0E-24 T 05-07-2017 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AC028_RS16190 4a4cd96214bf4bd7e7a80560e8b90a8a 197 Pfam PF01025 GrpE 37 195 7.7E-47 T 05-07-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AC028_RS16190 4a4cd96214bf4bd7e7a80560e8b90a8a 197 PRINTS PR00773 GrpE protein signature 67 83 8.6E-24 T 05-07-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AC028_RS16190 4a4cd96214bf4bd7e7a80560e8b90a8a 197 PRINTS PR00773 GrpE protein signature 95 110 8.6E-24 T 05-07-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AC028_RS16190 4a4cd96214bf4bd7e7a80560e8b90a8a 197 PRINTS PR00773 GrpE protein signature 147 162 8.6E-24 T 05-07-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AC028_RS16190 4a4cd96214bf4bd7e7a80560e8b90a8a 197 PRINTS PR00773 GrpE protein signature 174 193 8.6E-24 T 05-07-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AC028_RS16190 4a4cd96214bf4bd7e7a80560e8b90a8a 197 ProSitePatterns PS01071 grpE protein signature. 150 193 - T 05-07-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AC028_RS16190 4a4cd96214bf4bd7e7a80560e8b90a8a 197 SUPERFAMILY SSF58014 45 139 6.15E-22 T 05-07-2017 AC028_RS10300 9eb388f4ea261e35556c3f85f9ab9cd4 849 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 33 848 6.0E-201 T 05-07-2017 IPR010104 Bacterial TonB-dependent receptor AC028_RS10300 9eb388f4ea261e35556c3f85f9ab9cd4 849 Pfam PF00593 TonB dependent receptor 592 848 1.8E-35 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS10300 9eb388f4ea261e35556c3f85f9ab9cd4 849 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 164 2.2E-13 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS10300 9eb388f4ea261e35556c3f85f9ab9cd4 849 SUPERFAMILY SSF56935 26 230 1.2E-94 T 05-07-2017 AC028_RS10300 9eb388f4ea261e35556c3f85f9ab9cd4 849 SUPERFAMILY SSF56935 267 468 1.2E-94 T 05-07-2017 AC028_RS10300 9eb388f4ea261e35556c3f85f9ab9cd4 849 SUPERFAMILY SSF56935 502 848 1.2E-94 T 05-07-2017 AC028_RS10300 9eb388f4ea261e35556c3f85f9ab9cd4 849 Gene3D G3DSA:2.170.130.10 53 166 2.8E-15 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS10300 9eb388f4ea261e35556c3f85f9ab9cd4 849 Gene3D G3DSA:2.40.170.20 167 229 1.0E-68 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS10300 9eb388f4ea261e35556c3f85f9ab9cd4 849 Gene3D G3DSA:2.40.170.20 266 488 1.0E-68 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS10300 9eb388f4ea261e35556c3f85f9ab9cd4 849 Gene3D G3DSA:2.40.170.20 532 848 1.0E-68 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21745 115665f1470723db2948eeb8ced789d6 308 Gene3D G3DSA:1.10.8.10 11 101 1.8E-7 T 05-07-2017 AC028_RS21745 115665f1470723db2948eeb8ced789d6 308 Gene3D G3DSA:3.40.50.150 105 281 4.9E-51 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS21745 115665f1470723db2948eeb8ced789d6 308 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 11 286 9.5E-69 T 05-07-2017 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AC028_RS21745 115665f1470723db2948eeb8ced789d6 308 SUPERFAMILY SSF53335 12 289 5.28E-47 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS21745 115665f1470723db2948eeb8ced789d6 308 Pfam PF05175 Methyltransferase small domain 131 213 4.2E-15 T 05-07-2017 IPR007848 Methyltransferase small domain GO:0008168 AC028_RS21745 115665f1470723db2948eeb8ced789d6 308 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 9 290 3.8E-116 T 05-07-2017 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AC028_RS21745 115665f1470723db2948eeb8ced789d6 308 PIRSF PIRSF037167 1 303 1.0E-123 T 05-07-2017 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AC028_RS21745 115665f1470723db2948eeb8ced789d6 308 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 2 296 48.796 T 05-07-2017 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AC028_RS21745 115665f1470723db2948eeb8ced789d6 308 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 200 206 - T 05-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AC028_RS12625 7ef6b124de6785aa7cce2f961be7ba5a 101 Gene3D G3DSA:3.30.40.10 3 85 2.1E-22 T 05-07-2017 IPR013083 Zinc finger, RING/FYVE/PHD-type AC028_RS12625 7ef6b124de6785aa7cce2f961be7ba5a 101 Pfam PF02148 Zn-finger in ubiquitin-hydrolases and other protein 21 87 5.3E-11 T 05-07-2017 IPR001607 Zinc finger, UBP-type GO:0008270 AC028_RS12625 7ef6b124de6785aa7cce2f961be7ba5a 101 SUPERFAMILY SSF57850 3 94 7.3E-28 T 05-07-2017 AC028_RS10000 a067f497673aca25ae85b6f84404f566 443 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 18 276 6.6E-50 T 05-07-2017 IPR007221 Rod shape-determining protein MreC GO:0008360 AC028_RS10000 a067f497673aca25ae85b6f84404f566 443 Pfam PF04085 rod shape-determining protein MreC 133 274 5.8E-32 T 05-07-2017 IPR007221 Rod shape-determining protein MreC GO:0008360 AC028_RS18815 655a7aa0cf493ab16a5ed8272fd0202b 286 Pfam PF13464 Domain of unknown function (DUF4115) 202 274 3.0E-17 T 05-07-2017 IPR025194 Domain of unknown function DUF4115 AC028_RS18815 655a7aa0cf493ab16a5ed8272fd0202b 286 Pfam PF13413 Helix-turn-helix domain 20 79 3.1E-21 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS18815 655a7aa0cf493ab16a5ed8272fd0202b 286 Gene3D G3DSA:1.10.260.40 16 84 1.1E-7 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS04430 f2b1720ad64f5350a16de01c7265cfe8 189 Gene3D G3DSA:1.25.40.20 47 173 1.1E-31 T 05-07-2017 IPR020683 Ankyrin repeat-containing domain AC028_RS04430 f2b1720ad64f5350a16de01c7265cfe8 189 Pfam PF12796 Ankyrin repeats (3 copies) 46 133 2.0E-11 T 05-07-2017 IPR020683 Ankyrin repeat-containing domain AC028_RS04430 f2b1720ad64f5350a16de01c7265cfe8 189 SMART SM00248 105 134 35.0 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04430 f2b1720ad64f5350a16de01c7265cfe8 189 SMART SM00248 138 167 8.5 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04430 f2b1720ad64f5350a16de01c7265cfe8 189 SMART SM00248 39 68 4500.0 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04430 f2b1720ad64f5350a16de01c7265cfe8 189 SMART SM00248 72 101 0.0059 T 05-07-2017 IPR002110 Ankyrin repeat GO:0005515 AC028_RS04430 f2b1720ad64f5350a16de01c7265cfe8 189 SUPERFAMILY SSF48403 41 169 2.82E-31 T 05-07-2017 IPR020683 Ankyrin repeat-containing domain AC028_RS17990 7b277bbfc80cd80c0654ce685282293b 579 Pfam PF01368 DHH family 74 204 4.8E-11 T 05-07-2017 IPR001667 DDH domain AC028_RS17990 7b277bbfc80cd80c0654ce685282293b 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 25 570 1.6E-132 T 05-07-2017 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AC028_RS17990 7b277bbfc80cd80c0654ce685282293b 579 Pfam PF02272 DHHA1 domain 381 451 1.4E-11 T 05-07-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AC028_RS17990 7b277bbfc80cd80c0654ce685282293b 579 SUPERFAMILY SSF64182 48 459 2.09E-103 T 05-07-2017 AC028_RS18575 8fb3fcf77b1242a263355adae0e3004b 97 Gene3D G3DSA:1.20.58.60 40 84 3.9E-4 T 05-07-2017 AC028_RS01085 aeff30b9c31eb16a5a91fa8e2a361b7b 780 SUPERFAMILY SSF48208 296 758 1.07E-27 T 05-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AC028_RS01085 aeff30b9c31eb16a5a91fa8e2a361b7b 780 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 43 765 5.0E-201 T 05-07-2017 IPR005887 Alpha-1,2-mannosidase, putative AC028_RS01085 aeff30b9c31eb16a5a91fa8e2a361b7b 780 Pfam PF07971 Glycosyl hydrolase family 92 277 761 5.8E-165 T 05-07-2017 IPR012939 Glycosyl hydrolase family 92 AC028_RS01085 aeff30b9c31eb16a5a91fa8e2a361b7b 780 Gene3D G3DSA:2.70.98.10 44 356 4.2E-104 T 05-07-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 AC028_RS01085 aeff30b9c31eb16a5a91fa8e2a361b7b 780 Gene3D G3DSA:1.20.1050.60 381 472 1.6E-27 T 05-07-2017 AC028_RS01085 aeff30b9c31eb16a5a91fa8e2a361b7b 780 Gene3D G3DSA:3.30.2080.10 628 772 4.8E-64 T 05-07-2017 AC028_RS01085 aeff30b9c31eb16a5a91fa8e2a361b7b 780 Gene3D G3DSA:1.20.1610.10 473 627 6.4E-60 T 05-07-2017 AC028_RS21825 e97ef7176d98faa973f5b733348f34ac 189 SUPERFAMILY SSF51283 3 188 6.15E-54 T 05-07-2017 IPR029054 dUTPase-like AC028_RS21825 e97ef7176d98faa973f5b733348f34ac 189 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 5 188 2.8E-48 T 05-07-2017 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 AC028_RS21825 e97ef7176d98faa973f5b733348f34ac 189 Gene3D G3DSA:2.70.40.10 3 188 2.1E-69 T 05-07-2017 IPR029054 dUTPase-like AC028_RS21825 e97ef7176d98faa973f5b733348f34ac 189 Pfam PF00692 dUTPase 81 184 5.1E-7 T 05-07-2017 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 AC028_RS21825 e97ef7176d98faa973f5b733348f34ac 189 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 189 28.445 T 05-07-2017 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 AC028_RS08990 69304c812e612f1f51f0551c33827cd2 731 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 181 3.0E-19 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS08990 69304c812e612f1f51f0551c33827cd2 731 Gene3D G3DSA:2.170.130.10 50 181 8.5E-23 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS08990 69304c812e612f1f51f0551c33827cd2 731 Gene3D G3DSA:2.40.170.20 182 729 4.1E-88 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS08990 69304c812e612f1f51f0551c33827cd2 731 Pfam PF00593 TonB dependent receptor 470 727 2.3E-30 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS08990 69304c812e612f1f51f0551c33827cd2 731 SUPERFAMILY SSF56935 50 729 4.76E-104 T 05-07-2017 AC028_RS12720 7c3176d8b2d0a5effbd87e44b9e0de05 110 SUPERFAMILY SSF54593 3 110 2.28E-15 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS12720 7c3176d8b2d0a5effbd87e44b9e0de05 110 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 78 4.1E-8 T 05-07-2017 AC028_RS12720 7c3176d8b2d0a5effbd87e44b9e0de05 110 Gene3D G3DSA:3.10.180.10 2 110 2.9E-24 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS09270 cd436bc79d0506dca03b433ffb95d5e2 548 SUPERFAMILY SSF53067 276 528 1.39E-58 T 05-07-2017 AC028_RS09270 cd436bc79d0506dca03b433ffb95d5e2 548 SUPERFAMILY SSF53067 17 275 4.49E-44 T 05-07-2017 AC028_RS09270 cd436bc79d0506dca03b433ffb95d5e2 548 PIRSF PIRSF000538 14 532 8.6E-90 T 05-07-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AC028_RS09270 cd436bc79d0506dca03b433ffb95d5e2 548 Gene3D G3DSA:3.30.420.40 16 273 1.2E-44 T 05-07-2017 AC028_RS09270 cd436bc79d0506dca03b433ffb95d5e2 548 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 285 481 2.0E-29 T 05-07-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AC028_RS09270 cd436bc79d0506dca03b433ffb95d5e2 548 Gene3D G3DSA:3.30.420.40 276 526 6.1E-51 T 05-07-2017 AC028_RS09270 cd436bc79d0506dca03b433ffb95d5e2 548 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 16 273 6.3E-36 T 05-07-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AC028_RS17440 548f1b02b1d2f786952a7eeddc757d51 274 SUPERFAMILY SSF53613 14 268 1.04E-73 T 05-07-2017 IPR029056 Ribokinase-like AC028_RS17440 548f1b02b1d2f786952a7eeddc757d51 274 Pfam PF08543 Phosphomethylpyrimidine kinase 21 259 1.4E-84 T 05-07-2017 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 AC028_RS17440 548f1b02b1d2f786952a7eeddc757d51 274 Gene3D G3DSA:3.40.1190.20 14 263 3.8E-92 T 05-07-2017 IPR029056 Ribokinase-like AC028_RS17440 548f1b02b1d2f786952a7eeddc757d51 274 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 14 258 1.5E-85 T 05-07-2017 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AC028_RS02225 1c6bf12d039f2293e51feae67be13c7d 327 Gene3D G3DSA:3.40.190.10 90 175 1.0E-14 T 05-07-2017 AC028_RS02225 1c6bf12d039f2293e51feae67be13c7d 327 Gene3D G3DSA:3.40.190.10 275 287 1.0E-14 T 05-07-2017 AC028_RS02225 1c6bf12d039f2293e51feae67be13c7d 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.8E-8 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS02225 1c6bf12d039f2293e51feae67be13c7d 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.8E-8 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS02225 1c6bf12d039f2293e51feae67be13c7d 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.8E-8 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS02225 1c6bf12d039f2293e51feae67be13c7d 327 Gene3D G3DSA:1.10.10.10 1 86 8.8E-21 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS02225 1c6bf12d039f2293e51feae67be13c7d 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 3.2E-16 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS02225 1c6bf12d039f2293e51feae67be13c7d 327 Pfam PF03466 LysR substrate binding domain 89 292 3.9E-38 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS02225 1c6bf12d039f2293e51feae67be13c7d 327 SUPERFAMILY SSF53850 91 297 3.55E-36 T 05-07-2017 AC028_RS02225 1c6bf12d039f2293e51feae67be13c7d 327 Gene3D G3DSA:3.40.190.10 176 261 3.2E-19 T 05-07-2017 AC028_RS02225 1c6bf12d039f2293e51feae67be13c7d 327 SUPERFAMILY SSF46785 1 88 5.69E-16 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS06265 0022ddc588d94cb5009e3bc5d357a2e4 450 Pfam PF10397 Adenylosuccinate lyase C-terminus 366 443 2.7E-13 T 05-07-2017 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AC028_RS06265 0022ddc588d94cb5009e3bc5d357a2e4 450 Gene3D G3DSA:1.20.200.10 105 371 9.1E-85 T 05-07-2017 AC028_RS06265 0022ddc588d94cb5009e3bc5d357a2e4 450 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 7 350 2.1E-142 T 05-07-2017 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 AC028_RS06265 0022ddc588d94cb5009e3bc5d357a2e4 450 Gene3D G3DSA:1.10.275.10 11 104 1.3E-37 T 05-07-2017 IPR024083 Fumarase/histidase, N-terminal AC028_RS06265 0022ddc588d94cb5009e3bc5d357a2e4 450 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 05-07-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 AC028_RS06265 0022ddc588d94cb5009e3bc5d357a2e4 450 SUPERFAMILY SSF48557 6 444 2.2E-113 T 05-07-2017 IPR008948 L-Aspartase-like GO:0003824 AC028_RS06265 0022ddc588d94cb5009e3bc5d357a2e4 450 Gene3D G3DSA:1.10.40.30 372 444 7.5E-24 T 05-07-2017 AC028_RS06265 0022ddc588d94cb5009e3bc5d357a2e4 450 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 1.5E-21 T 05-07-2017 IPR000362 Fumarate lyase family AC028_RS06265 0022ddc588d94cb5009e3bc5d357a2e4 450 PRINTS PR00149 Fumarate lyase superfamily signature 102 120 1.5E-21 T 05-07-2017 IPR000362 Fumarate lyase family AC028_RS06265 0022ddc588d94cb5009e3bc5d357a2e4 450 PRINTS PR00149 Fumarate lyase superfamily signature 147 165 1.5E-21 T 05-07-2017 IPR000362 Fumarate lyase family AC028_RS06265 0022ddc588d94cb5009e3bc5d357a2e4 450 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 1.5E-21 T 05-07-2017 IPR000362 Fumarate lyase family AC028_RS06265 0022ddc588d94cb5009e3bc5d357a2e4 450 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 6.8E-9 T 05-07-2017 AC028_RS06265 0022ddc588d94cb5009e3bc5d357a2e4 450 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 6.8E-9 T 05-07-2017 AC028_RS06265 0022ddc588d94cb5009e3bc5d357a2e4 450 PRINTS PR00145 Argininosuccinate lyase family signature 101 123 6.8E-9 T 05-07-2017 AC028_RS06265 0022ddc588d94cb5009e3bc5d357a2e4 450 PRINTS PR00145 Argininosuccinate lyase family signature 142 162 6.8E-9 T 05-07-2017 AC028_RS06265 0022ddc588d94cb5009e3bc5d357a2e4 450 SMART SM00998 365 444 5.2E-23 T 05-07-2017 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AC028_RS06265 0022ddc588d94cb5009e3bc5d357a2e4 450 Pfam PF00206 Lyase 25 302 3.2E-52 T 05-07-2017 IPR022761 Fumarate lyase, N-terminal AC028_RS12730 6c3e6706e7014210d307977be3d42c8c 650 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 10 605 1.4E-175 T 05-07-2017 IPR004814 Oligopeptide transporter OPT AC028_RS12730 6c3e6706e7014210d307977be3d42c8c 650 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 8 602 1.7E-81 T 05-07-2017 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 AC028_RS12730 6c3e6706e7014210d307977be3d42c8c 650 Pfam PF03169 OPT oligopeptide transporter protein 9 605 5.4E-123 T 05-07-2017 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 AC028_RS07155 fa2e59e87198b7932dd5bf046af7d804 350 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 160 169 - T 05-07-2017 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 AC028_RS07155 fa2e59e87198b7932dd5bf046af7d804 350 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 63 314 1.6E-50 T 05-07-2017 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 AC028_RS07155 fa2e59e87198b7932dd5bf046af7d804 350 Gene3D G3DSA:3.20.20.80 36 341 1.9E-91 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS07155 fa2e59e87198b7932dd5bf046af7d804 350 SUPERFAMILY SSF51445 36 341 2.24E-77 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS10700 669afbd2e1dc54f3541569c3299840a7 460 Gene3D G3DSA:3.20.20.80 58 311 4.6E-26 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS10700 669afbd2e1dc54f3541569c3299840a7 460 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 97 179 2.8E-5 T 05-07-2017 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS10700 669afbd2e1dc54f3541569c3299840a7 460 SUPERFAMILY SSF51445 35 314 4.78E-39 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS03165 3e0dd6d4810bc92daa0ac80e4201d67d 763 Pfam PF03958 Bacterial type II/III secretion system short domain 259 326 2.8E-7 T 05-07-2017 IPR005644 NolW-like AC028_RS03165 3e0dd6d4810bc92daa0ac80e4201d67d 763 Pfam PF03958 Bacterial type II/III secretion system short domain 334 483 3.5E-10 T 05-07-2017 IPR005644 NolW-like AC028_RS03165 3e0dd6d4810bc92daa0ac80e4201d67d 763 Pfam PF00263 Bacterial type II and III secretion system protein 558 734 4.6E-43 T 05-07-2017 IPR004846 Type II/III secretion system GO:0009306 AC028_RS03165 3e0dd6d4810bc92daa0ac80e4201d67d 763 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 98 743 9.0E-182 T 05-07-2017 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 AC028_RS03165 3e0dd6d4810bc92daa0ac80e4201d67d 763 PRINTS PR00811 Bacterial general secretion pathway protein D signature 721 735 5.4E-16 T 05-07-2017 IPR001775 GspD/PilQ family AC028_RS03165 3e0dd6d4810bc92daa0ac80e4201d67d 763 PRINTS PR00811 Bacterial general secretion pathway protein D signature 554 578 5.4E-16 T 05-07-2017 IPR001775 GspD/PilQ family AC028_RS03165 3e0dd6d4810bc92daa0ac80e4201d67d 763 PRINTS PR00811 Bacterial general secretion pathway protein D signature 483 493 5.4E-16 T 05-07-2017 IPR001775 GspD/PilQ family AC028_RS03165 3e0dd6d4810bc92daa0ac80e4201d67d 763 PRINTS PR00811 Bacterial general secretion pathway protein D signature 698 716 5.4E-16 T 05-07-2017 IPR001775 GspD/PilQ family AC028_RS03165 3e0dd6d4810bc92daa0ac80e4201d67d 763 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 679 712 - T 05-07-2017 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AC028_RS07325 59799da1ef2fb07ce02c2883d00639d9 440 Pfam PF01764 Lipase (class 3) 105 168 5.8E-6 T 05-07-2017 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 AC028_RS07325 59799da1ef2fb07ce02c2883d00639d9 440 SUPERFAMILY SSF53474 37 183 4.79E-22 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS07325 59799da1ef2fb07ce02c2883d00639d9 440 Gene3D G3DSA:3.40.50.1820 7 209 3.7E-22 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS09555 b0664c475b22ef23046f9d669f1983c7 101 SMART SM01086 6 98 4.0E-13 T 05-07-2017 IPR019489 Clp ATPase, C-terminal AC028_RS09555 b0664c475b22ef23046f9d669f1983c7 101 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 6 82 9.2E-15 T 05-07-2017 IPR019489 Clp ATPase, C-terminal AC028_RS09555 b0664c475b22ef23046f9d669f1983c7 101 Gene3D G3DSA:1.10.8.60 6 96 8.5E-14 T 05-07-2017 AC028_RS09895 9ffad65a4b8f9e6e9f13581416c008a7 183 Gene3D G3DSA:3.60.20.10 13 183 3.1E-78 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS09895 9ffad65a4b8f9e6e9f13581416c008a7 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 13 183 1.8E-81 T 05-07-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AC028_RS09895 9ffad65a4b8f9e6e9f13581416c008a7 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 12 183 40.96 T 05-07-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AC028_RS09895 9ffad65a4b8f9e6e9f13581416c008a7 183 Pfam PF00227 Proteasome subunit 10 181 1.4E-20 T 05-07-2017 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5687128|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-983168 AC028_RS09895 9ffad65a4b8f9e6e9f13581416c008a7 183 PIRSF PIRSF039093 6 183 2.3E-81 T 05-07-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AC028_RS09895 9ffad65a4b8f9e6e9f13581416c008a7 183 SUPERFAMILY SSF56235 9 182 1.24E-52 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS06240 68ff4e13ebc54d2616c44b046612d04f 287 Gene3D G3DSA:3.40.1080.10 4 120 1.5E-78 T 05-07-2017 AC028_RS06240 68ff4e13ebc54d2616c44b046612d04f 287 Gene3D G3DSA:3.40.1080.10 158 278 1.5E-78 T 05-07-2017 AC028_RS06240 68ff4e13ebc54d2616c44b046612d04f 287 SUPERFAMILY SSF100950 5 274 2.56E-72 T 05-07-2017 AC028_RS06240 68ff4e13ebc54d2616c44b046612d04f 287 Pfam PF01144 Coenzyme A transferase 6 222 1.0E-18 T 05-07-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 AC028_RS06240 68ff4e13ebc54d2616c44b046612d04f 287 SMART SM00882 5 224 2.7E-34 T 05-07-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 AC028_RS20815 531beec5fd816d791f31dbd6b0291940 331 Gene3D G3DSA:1.10.260.40 4 53 3.4E-22 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS20815 531beec5fd816d791f31dbd6b0291940 331 Gene3D G3DSA:3.40.50.2300 54 170 5.7E-42 T 05-07-2017 AC028_RS20815 531beec5fd816d791f31dbd6b0291940 331 Pfam PF13377 Periplasmic binding protein-like domain 167 324 4.7E-34 T 05-07-2017 AC028_RS20815 531beec5fd816d791f31dbd6b0291940 331 SUPERFAMILY SSF47413 3 59 3.38E-15 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS20815 531beec5fd816d791f31dbd6b0291940 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 5.4E-15 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS20815 531beec5fd816d791f31dbd6b0291940 331 SUPERFAMILY SSF53822 58 312 1.81E-66 T 05-07-2017 IPR028082 Periplasmic binding protein-like I AC028_RS20815 531beec5fd816d791f31dbd6b0291940 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 05-07-2017 AC028_RS20815 531beec5fd816d791f31dbd6b0291940 331 SMART SM00354 2 71 2.7E-26 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS20815 531beec5fd816d791f31dbd6b0291940 331 Gene3D G3DSA:3.40.50.2300 171 305 1.3E-39 T 05-07-2017 AC028_RS08995 dfcd709c76bb49379dccc6311dc1b288 400 SUPERFAMILY SSF53383 2 396 1.31E-114 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS08995 dfcd709c76bb49379dccc6311dc1b288 400 Gene3D G3DSA:3.40.640.10 48 318 1.5E-104 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS08995 dfcd709c76bb49379dccc6311dc1b288 400 Pfam PF00155 Aminotransferase class I and II 29 394 1.1E-79 T 05-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AC028_RS08995 dfcd709c76bb49379dccc6311dc1b288 400 PRINTS PR00799 Aspartate aminotransferase signature 276 301 2.5E-35 T 05-07-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AC028_RS08995 dfcd709c76bb49379dccc6311dc1b288 400 PRINTS PR00799 Aspartate aminotransferase signature 177 196 2.5E-35 T 05-07-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AC028_RS08995 dfcd709c76bb49379dccc6311dc1b288 400 PRINTS PR00799 Aspartate aminotransferase signature 208 220 2.5E-35 T 05-07-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AC028_RS08995 dfcd709c76bb49379dccc6311dc1b288 400 PRINTS PR00799 Aspartate aminotransferase signature 343 361 2.5E-35 T 05-07-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AC028_RS08995 dfcd709c76bb49379dccc6311dc1b288 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 246 259 - T 05-07-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AC028_RS14265 c032f31455cdaa7eed1e496b1490a731 240 SMART SM00382 29 211 4.0E-12 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS14265 c032f31455cdaa7eed1e496b1490a731 240 SUPERFAMILY SSF52540 4 217 7.84E-51 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS14265 c032f31455cdaa7eed1e496b1490a731 240 Gene3D G3DSA:3.40.50.300 2 215 4.3E-56 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS14265 c032f31455cdaa7eed1e496b1490a731 240 Pfam PF00005 ABC transporter 20 163 9.2E-25 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS14265 c032f31455cdaa7eed1e496b1490a731 240 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS10305 1947b116db0a2f8168149278970aa0ab 410 SUPERFAMILY SSF81891 121 403 6.67E-56 T 05-07-2017 AC028_RS10305 1947b116db0a2f8168149278970aa0ab 410 SUPERFAMILY SSF81301 1 120 7.08E-29 T 05-07-2017 AC028_RS10305 1947b116db0a2f8168149278970aa0ab 410 Gene3D G3DSA:1.10.3090.10 123 362 2.1E-52 T 05-07-2017 AC028_RS10305 1947b116db0a2f8168149278970aa0ab 410 Gene3D G3DSA:3.30.460.10 1 122 7.1E-31 T 05-07-2017 AC028_RS10305 1947b116db0a2f8168149278970aa0ab 410 Pfam PF01743 Poly A polymerase head domain 3 123 1.0E-18 T 05-07-2017 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AC028_RS10305 1947b116db0a2f8168149278970aa0ab 410 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 150 213 4.5E-14 T 05-07-2017 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AC028_RS10305 1947b116db0a2f8168149278970aa0ab 410 PIRSF PIRSF000813 1 409 1.9E-194 T 05-07-2017 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AC028_RS10305 1947b116db0a2f8168149278970aa0ab 410 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 409 52.081 T 05-07-2017 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AC028_RS10305 1947b116db0a2f8168149278970aa0ab 410 Pfam PF01966 HD domain 231 333 5.0E-6 T 05-07-2017 IPR006674 HD domain AC028_RS07900 7ebb50760913c2de7dd1a53811e83cb2 382 Gene3D G3DSA:2.40.50.100 169 200 1.1E-15 T 05-07-2017 AC028_RS07900 7ebb50760913c2de7dd1a53811e83cb2 382 Gene3D G3DSA:2.40.50.100 65 94 1.1E-15 T 05-07-2017 AC028_RS07900 7ebb50760913c2de7dd1a53811e83cb2 382 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 260 2.1E-11 T 05-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_RS07900 7ebb50760913c2de7dd1a53811e83cb2 382 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 358 3.4E-59 T 05-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AC028_RS07900 7ebb50760913c2de7dd1a53811e83cb2 382 SUPERFAMILY SSF111369 51 198 5.75E-17 T 05-07-2017 AC028_RS15435 6c95363e361eccaa320249c4dd459db3 396 SUPERFAMILY SSF51735 7 155 3.8E-39 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS15435 6c95363e361eccaa320249c4dd459db3 396 SUPERFAMILY SSF55347 131 270 5.23E-58 T 05-07-2017 AC028_RS15435 6c95363e361eccaa320249c4dd459db3 396 Gene3D G3DSA:1.10.1740.10 310 389 2.7E-29 T 05-07-2017 AC028_RS15435 6c95363e361eccaa320249c4dd459db3 396 Gene3D G3DSA:3.40.50.720 5 155 4.6E-47 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS15435 6c95363e361eccaa320249c4dd459db3 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 267 383 1.0E-37 T 05-07-2017 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AC028_RS15435 6c95363e361eccaa320249c4dd459db3 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 9 388 45.592 T 05-07-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AC028_RS15435 6c95363e361eccaa320249c4dd459db3 396 SUPERFAMILY SSF69055 299 388 3.66E-30 T 05-07-2017 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AC028_RS15435 6c95363e361eccaa320249c4dd459db3 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 9 137 1.2E-39 T 05-07-2017 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AC028_RS15435 6c95363e361eccaa320249c4dd459db3 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 8 389 1.4E-135 T 05-07-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AC028_RS15435 6c95363e361eccaa320249c4dd459db3 396 PIRSF PIRSF006205 6 395 1.7E-145 T 05-07-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AC028_RS15435 6c95363e361eccaa320249c4dd459db3 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 151 235 4.3E-39 T 05-07-2017 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AC028_RS13715 316941574b1b43292201e99441782eb1 438 PIRSF PIRSF006060 1 437 3.2E-72 T 05-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AC028_RS13715 316941574b1b43292201e99441782eb1 438 Pfam PF13520 Amino acid permease 18 406 1.2E-48 T 05-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AC028_RS18325 46850da34a8ebc11519f035665c323fa 208 SUPERFAMILY SSF75708 38 207 6.8E-38 T 05-07-2017 AC028_RS18325 46850da34a8ebc11519f035665c323fa 208 Pfam PF04344 Chemotaxis phosphatase, CheZ 48 113 4.4E-11 T 05-07-2017 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AC028_RS18325 46850da34a8ebc11519f035665c323fa 208 Pfam PF04344 Chemotaxis phosphatase, CheZ 125 207 1.3E-13 T 05-07-2017 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AC028_RS18325 46850da34a8ebc11519f035665c323fa 208 Gene3D G3DSA:1.10.287.500 124 161 4.1E-9 T 05-07-2017 AC028_RS18325 46850da34a8ebc11519f035665c323fa 208 Gene3D G3DSA:1.10.287.500 68 116 1.4E-11 T 05-07-2017 AC028_RS09990 b21777254be4c9b31d964459100a9de3 310 Gene3D G3DSA:3.40.1190.20 2 304 4.4E-54 T 05-07-2017 IPR029056 Ribokinase-like AC028_RS09990 b21777254be4c9b31d964459100a9de3 310 SUPERFAMILY SSF53613 2 296 5.46E-63 T 05-07-2017 IPR029056 Ribokinase-like AC028_RS09990 b21777254be4c9b31d964459100a9de3 310 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 05-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AC028_RS09990 b21777254be4c9b31d964459100a9de3 310 Pfam PF00294 pfkB family carbohydrate kinase 36 290 7.5E-37 T 05-07-2017 IPR011611 Carbohydrate kinase PfkB AC028_RS02640 ddc9d3dfa9abbd66a49ed23bed4c9912 149 SUPERFAMILY SSF88697 1 147 1.66E-56 T 05-07-2017 IPR015947 PUA-like domain AC028_RS02640 ddc9d3dfa9abbd66a49ed23bed4c9912 149 Pfam PF01878 EVE domain 1 146 2.9E-52 T 05-07-2017 IPR002740 EVE domain AC028_RS02640 ddc9d3dfa9abbd66a49ed23bed4c9912 149 Gene3D G3DSA:3.10.590.10 1 145 1.2E-28 T 05-07-2017 IPR002740 EVE domain AC028_RS08610 4592d7e99d75753a30cf5a000e2430ba 245 SUPERFAMILY SSF51735 4 244 2.04E-76 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS08610 4592d7e99d75753a30cf5a000e2430ba 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.3E-37 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS08610 4592d7e99d75753a30cf5a000e2430ba 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.3E-37 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS08610 4592d7e99d75753a30cf5a000e2430ba 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.3E-37 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS08610 4592d7e99d75753a30cf5a000e2430ba 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.3E-37 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS08610 4592d7e99d75753a30cf5a000e2430ba 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.3E-37 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS08610 4592d7e99d75753a30cf5a000e2430ba 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.3E-37 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS08610 4592d7e99d75753a30cf5a000e2430ba 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 184 0.0046 T 05-07-2017 AC028_RS08610 4592d7e99d75753a30cf5a000e2430ba 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 4.1E-58 T 05-07-2017 AC028_RS08610 4592d7e99d75753a30cf5a000e2430ba 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 5.6E-11 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS08610 4592d7e99d75753a30cf5a000e2430ba 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 5.6E-11 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS08610 4592d7e99d75753a30cf5a000e2430ba 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.6E-11 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS08610 4592d7e99d75753a30cf5a000e2430ba 245 Gene3D G3DSA:3.40.50.720 4 244 2.8E-77 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS18330 3e9069b2cb12ccdf587a08ca6ddf1a36 126 Gene3D G3DSA:3.40.50.2300 1 121 2.6E-39 T 05-07-2017 AC028_RS18330 3e9069b2cb12ccdf587a08ca6ddf1a36 126 SMART SM00448 1 115 6.5E-35 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS18330 3e9069b2cb12ccdf587a08ca6ddf1a36 126 SUPERFAMILY SSF52172 1 122 1.04E-37 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS18330 3e9069b2cb12ccdf587a08ca6ddf1a36 126 Pfam PF00072 Response regulator receiver domain 3 115 4.9E-31 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS11515 00f62bf3b15fe9ba9e7e42c6cba32e98 217 Pfam PF03550 Outer membrane lipoprotein LolB 58 213 1.6E-39 T 05-07-2017 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AC028_RS11515 00f62bf3b15fe9ba9e7e42c6cba32e98 217 Gene3D G3DSA:2.50.20.10 14 215 2.0E-48 T 05-07-2017 AC028_RS11515 00f62bf3b15fe9ba9e7e42c6cba32e98 217 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 4 215 24.671 T 05-07-2017 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AC028_RS11515 00f62bf3b15fe9ba9e7e42c6cba32e98 217 SUPERFAMILY SSF89392 44 215 5.89E-39 T 05-07-2017 IPR029046 Lipoprotein localisation LolA/LolB/LppX AC028_RS11515 00f62bf3b15fe9ba9e7e42c6cba32e98 217 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 52 214 5.8E-26 T 05-07-2017 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AC028_RS09595 3dbefb2f7ace1419370d01ba4e45ba6d 324 Gene3D G3DSA:3.40.30.10 40 176 1.7E-19 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS09595 3dbefb2f7ace1419370d01ba4e45ba6d 324 Pfam PF13410 Glutathione S-transferase, C-terminal domain 204 270 2.7E-13 T 05-07-2017 AC028_RS09595 3dbefb2f7ace1419370d01ba4e45ba6d 324 SUPERFAMILY SSF52833 41 162 3.48E-15 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS09595 3dbefb2f7ace1419370d01ba4e45ba6d 324 Gene3D G3DSA:1.20.1050.10 177 288 1.6E-25 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS09595 3dbefb2f7ace1419370d01ba4e45ba6d 324 PIRSF PIRSF015753 5 323 1.9E-135 T 05-07-2017 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 AC028_RS09595 3dbefb2f7ace1419370d01ba4e45ba6d 324 SUPERFAMILY SSF47616 175 322 2.09E-37 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS09595 3dbefb2f7ace1419370d01ba4e45ba6d 324 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 157 5.1E-22 T 05-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AC028_RS01715 f59bdac31acaa349240ece84f94a2b59 442 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 9 429 3.9E-171 T 05-07-2017 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AC028_RS01715 f59bdac31acaa349240ece84f94a2b59 442 SUPERFAMILY SSF51679 4 435 1.05E-125 T 05-07-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AC028_RS01715 f59bdac31acaa349240ece84f94a2b59 442 PIRSF PIRSF000337 3 442 2.1E-155 T 05-07-2017 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AC028_RS01715 f59bdac31acaa349240ece84f94a2b59 442 Pfam PF00296 Luciferase-like monooxygenase 17 385 2.0E-62 T 05-07-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AC028_RS01715 f59bdac31acaa349240ece84f94a2b59 442 Gene3D G3DSA:3.20.20.30 347 435 4.8E-128 T 05-07-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AC028_RS01715 f59bdac31acaa349240ece84f94a2b59 442 Gene3D G3DSA:3.20.20.30 1 307 4.8E-128 T 05-07-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AC028_RS16845 711d5d8adf0d5e2b0205211f913ef48b 354 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 14 352 38.831 T 05-07-2017 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 AC028_RS16845 711d5d8adf0d5e2b0205211f913ef48b 354 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 43 341 2.6E-111 T 05-07-2017 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 AC028_RS16845 711d5d8adf0d5e2b0205211f913ef48b 354 Gene3D G3DSA:1.20.120.420 15 162 3.5E-50 T 05-07-2017 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 AC028_RS16845 711d5d8adf0d5e2b0205211f913ef48b 354 SUPERFAMILY SSF100950 12 345 2.51E-113 T 05-07-2017 AC028_RS16845 711d5d8adf0d5e2b0205211f913ef48b 354 Pfam PF01008 Initiation factor 2 subunit family 57 341 1.3E-75 T 05-07-2017 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 AC028_RS16845 711d5d8adf0d5e2b0205211f913ef48b 354 Gene3D G3DSA:3.40.50.10470 163 344 9.8E-68 T 05-07-2017 AC028_RS16845 711d5d8adf0d5e2b0205211f913ef48b 354 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 17 341 2.0E-136 T 05-07-2017 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 AC028_RS19495 344791b28ac48a3cc6069f67c67ac24d 172 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 24 138 3.4E-5 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS19495 344791b28ac48a3cc6069f67c67ac24d 172 Gene3D G3DSA:1.20.140.10 36 129 2.3E-5 T 05-07-2017 AC028_RS20165 16c6264c23de610a60d87c934a74e719 346 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 304 336 1.4E-7 T 05-07-2017 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AC028_RS20165 16c6264c23de610a60d87c934a74e719 346 SUPERFAMILY SSF109635 213 305 6.15E-29 T 05-07-2017 AC028_RS20165 16c6264c23de610a60d87c934a74e719 346 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 223 345 28.523 T 05-07-2017 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AC028_RS20165 16c6264c23de610a60d87c934a74e719 346 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 227 336 1.4E-42 T 05-07-2017 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AC028_RS20165 16c6264c23de610a60d87c934a74e719 346 SUPERFAMILY SSF57716 306 344 3.85E-6 T 05-07-2017 AC028_RS11655 9b2357ddb7420fb81b1a55eba8fe2505 275 SMART SM01382 124 253 4.3E-87 T 05-07-2017 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AC028_RS11655 9b2357ddb7420fb81b1a55eba8fe2505 275 Gene3D G3DSA:4.10.950.10 196 274 2.8E-33 T 05-07-2017 IPR014726 Ribosomal protein L2, domain 3 AC028_RS11655 9b2357ddb7420fb81b1a55eba8fe2505 275 SUPERFAMILY SSF50104 127 273 8.42E-57 T 05-07-2017 IPR008991 Translation protein SH3-like domain AC028_RS11655 9b2357ddb7420fb81b1a55eba8fe2505 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 2.4E-34 T 05-07-2017 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11655 9b2357ddb7420fb81b1a55eba8fe2505 275 SMART SM01383 42 118 6.6E-44 T 05-07-2017 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11655 9b2357ddb7420fb81b1a55eba8fe2505 275 PIRSF PIRSF002158 6 275 1.3E-97 T 05-07-2017 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11655 9b2357ddb7420fb81b1a55eba8fe2505 275 SUPERFAMILY SSF50249 3 125 3.05E-48 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS11655 9b2357ddb7420fb81b1a55eba8fe2505 275 Gene3D G3DSA:2.40.50.140 1 114 1.9E-49 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS11655 9b2357ddb7420fb81b1a55eba8fe2505 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 47.199 T 05-07-2017 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11655 9b2357ddb7420fb81b1a55eba8fe2505 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 2.4E-53 T 05-07-2017 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AC028_RS11655 9b2357ddb7420fb81b1a55eba8fe2505 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 05-07-2017 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11655 9b2357ddb7420fb81b1a55eba8fe2505 275 Gene3D G3DSA:2.30.30.30 119 195 1.1E-31 T 05-07-2017 IPR014722 Ribosomal protein L2 domain 2 AC028_RS11655 9b2357ddb7420fb81b1a55eba8fe2505 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 274 6.3E-131 T 05-07-2017 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS18345 262e26c17bf7f164844e4bd524083caf 563 Pfam PF00448 SRP54-type protein, GTPase domain 356 543 6.2E-38 T 05-07-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AC028_RS18345 262e26c17bf7f164844e4bd524083caf 563 SMART SM00382 353 547 9.2E-12 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS18345 262e26c17bf7f164844e4bd524083caf 563 SMART SM00962 354 545 4.2E-56 T 05-07-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AC028_RS18345 262e26c17bf7f164844e4bd524083caf 563 SUPERFAMILY SSF52540 351 540 1.6E-33 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18345 262e26c17bf7f164844e4bd524083caf 563 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 442 6.3E-73 T 05-07-2017 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 AC028_RS18345 262e26c17bf7f164844e4bd524083caf 563 Gene3D G3DSA:3.40.50.300 353 543 7.2E-48 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS22035 8471e03e7c97707096da34383ef38cad 342 Gene3D G3DSA:1.20.272.20 222 335 1.1E-23 T 05-07-2017 AC028_RS22035 8471e03e7c97707096da34383ef38cad 342 Gene3D G3DSA:3.40.50.300 1 134 2.6E-40 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS22035 8471e03e7c97707096da34383ef38cad 342 Gene3D G3DSA:1.10.8.60 143 221 1.5E-29 T 05-07-2017 AC028_RS22035 8471e03e7c97707096da34383ef38cad 342 SUPERFAMILY SSF52540 2 209 1.1E-41 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS22035 8471e03e7c97707096da34383ef38cad 342 Pfam PF06144 DNA polymerase III, delta subunit 20 189 5.1E-21 T 05-07-2017 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 AC028_RS22035 8471e03e7c97707096da34383ef38cad 342 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 332 6.7E-96 T 05-07-2017 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 AC028_RS22035 8471e03e7c97707096da34383ef38cad 342 SUPERFAMILY SSF48019 211 333 1.7E-20 T 05-07-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AC028_RS18005 cc0ea028f5601422643885e79bec2062 351 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 340 6.5E-153 T 05-07-2017 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AC028_RS18005 cc0ea028f5601422643885e79bec2062 351 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 222 238 - T 05-07-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AC028_RS18005 cc0ea028f5601422643885e79bec2062 351 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 342 38.201 T 05-07-2017 IPR020853 Peptide chain release factor 2, bacterial GO:0005737|GO:0006415|GO:0016149 AC028_RS18005 cc0ea028f5601422643885e79bec2062 351 SMART SM00937 62 172 1.1E-55 T 05-07-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AC028_RS18005 cc0ea028f5601422643885e79bec2062 351 Gene3D G3DSA:1.20.58.410 1 93 8.8E-26 T 05-07-2017 AC028_RS18005 cc0ea028f5601422643885e79bec2062 351 Pfam PF00472 RF-1 domain 206 314 2.2E-39 T 05-07-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AC028_RS18005 cc0ea028f5601422643885e79bec2062 351 SUPERFAMILY SSF75620 9 340 3.01E-129 T 05-07-2017 AC028_RS18005 cc0ea028f5601422643885e79bec2062 351 Pfam PF03462 PCRF domain 8 197 8.3E-56 T 05-07-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AC028_RS18005 cc0ea028f5601422643885e79bec2062 351 Gene3D G3DSA:3.30.160.20 205 283 1.4E-37 T 05-07-2017 IPR014720 Double-stranded RNA-binding domain AC028_RS03140 87318407caf02109ed55b30c9cd4e757 385 Pfam PF01636 Phosphotransferase enzyme family 57 308 3.5E-27 T 05-07-2017 IPR002575 Aminoglycoside phosphotransferase AC028_RS03140 87318407caf02109ed55b30c9cd4e757 385 Gene3D G3DSA:3.90.1200.10 123 325 1.1E-27 T 05-07-2017 AC028_RS03140 87318407caf02109ed55b30c9cd4e757 385 SUPERFAMILY SSF56112 20 340 1.66E-41 T 05-07-2017 IPR011009 Protein kinase-like domain AC028_RS20370 458196ca44f835049b234d06498b7ea1 292 Pfam PF01435 Peptidase family M48 76 286 2.5E-41 T 05-07-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AC028_RS20370 458196ca44f835049b234d06498b7ea1 292 Hamap MF_00188 Protease HtpX [htpX]. 2 287 25.786 T 05-07-2017 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 AC028_RS20370 458196ca44f835049b234d06498b7ea1 292 Gene3D G3DSA:3.30.2010.10 70 157 5.8E-33 T 05-07-2017 AC028_RS18340 788e4d71111f8c023a15c7635dbe7b23 294 PIRSF PIRSF003092 2 292 1.1E-81 T 05-07-2017 IPR025501 ATP binding protein MinD AC028_RS18340 788e4d71111f8c023a15c7635dbe7b23 294 Gene3D G3DSA:3.40.50.300 27 266 4.7E-58 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18340 788e4d71111f8c023a15c7635dbe7b23 294 SUPERFAMILY SSF52540 27 282 1.47E-54 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18340 788e4d71111f8c023a15c7635dbe7b23 294 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 29 215 2.0E-26 T 05-07-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AC028_RS19555 7d607658148afc81340db4c12f349eb2 325 SUPERFAMILY SSF75615 114 206 3.01E-25 T 05-07-2017 AC028_RS19555 7d607658148afc81340db4c12f349eb2 325 SUPERFAMILY SSF53790 216 321 2.91E-15 T 05-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AC028_RS19555 7d607658148afc81340db4c12f349eb2 325 Gene3D G3DSA:1.10.8.210 150 208 6.7E-12 T 05-07-2017 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AC028_RS19555 7d607658148afc81340db4c12f349eb2 325 Pfam PF13241 Putative NAD(P)-binding 6 115 2.8E-25 T 05-07-2017 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AC028_RS19555 7d607658148afc81340db4c12f349eb2 325 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 221 296 1.2E-11 T 05-07-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AC028_RS19555 7d607658148afc81340db4c12f349eb2 325 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 9.0E-16 T 05-07-2017 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AC028_RS19555 7d607658148afc81340db4c12f349eb2 325 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 2.8E-67 T 05-07-2017 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AC028_RS19555 7d607658148afc81340db4c12f349eb2 325 Gene3D G3DSA:3.40.50.720 1 110 5.5E-35 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS19555 7d607658148afc81340db4c12f349eb2 325 Gene3D G3DSA:3.40.1010.10 216 321 1.9E-15 T 05-07-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AC028_RS19555 7d607658148afc81340db4c12f349eb2 325 Gene3D G3DSA:3.30.160.110 113 147 4.4E-18 T 05-07-2017 AC028_RS19555 7d607658148afc81340db4c12f349eb2 325 SUPERFAMILY SSF51735 1 111 1.13E-21 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS19555 7d607658148afc81340db4c12f349eb2 325 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 2.6E-8 T 05-07-2017 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AC028_RS02645 e8e2457092d48d55ee0a49d675fe0112 215 SUPERFAMILY SSF100950 2 144 1.03E-46 T 05-07-2017 AC028_RS02645 e8e2457092d48d55ee0a49d675fe0112 215 Gene3D G3DSA:3.30.70.260 135 195 3.1E-27 T 05-07-2017 AC028_RS02645 e8e2457092d48d55ee0a49d675fe0112 215 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 5 209 5.5E-67 T 05-07-2017 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AC028_RS02645 e8e2457092d48d55ee0a49d675fe0112 215 Gene3D G3DSA:3.40.50.1360 2 134 2.2E-57 T 05-07-2017 AC028_RS02645 e8e2457092d48d55ee0a49d675fe0112 215 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 1 215 33.596 T 05-07-2017 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AC028_RS02645 e8e2457092d48d55ee0a49d675fe0112 215 SUPERFAMILY SSF75445 125 197 1.44E-22 T 05-07-2017 AC028_RS02645 e8e2457092d48d55ee0a49d675fe0112 215 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 47 210 9.9E-57 T 05-07-2017 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 AC028_RS10200 bb86e442d1a668d3024061cffd7e2dcd 495 SUPERFAMILY SSF160246 7 69 8.89E-12 T 05-07-2017 AC028_RS10200 bb86e442d1a668d3024061cffd7e2dcd 495 Gene3D G3DSA:3.40.50.300 221 489 1.6E-96 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10200 bb86e442d1a668d3024061cffd7e2dcd 495 SMART SM00382 243 385 6.1E-7 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS10200 bb86e442d1a668d3024061cffd7e2dcd 495 Gene3D G3DSA:3.30.450.90 98 215 4.0E-46 T 05-07-2017 AC028_RS10200 bb86e442d1a668d3024061cffd7e2dcd 495 Pfam PF00437 Type II/IV secretion system protein 120 382 1.9E-80 T 05-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AC028_RS10200 bb86e442d1a668d3024061cffd7e2dcd 495 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 310 324 - T 05-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AC028_RS10200 bb86e442d1a668d3024061cffd7e2dcd 495 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 7 485 1.1E-192 T 05-07-2017 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 AC028_RS10200 bb86e442d1a668d3024061cffd7e2dcd 495 SUPERFAMILY SSF52540 93 485 2.56E-99 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10085 049f7980eb3caedba8c17529cd15fb6c 351 Gene3D G3DSA:3.40.50.620 5 201 2.0E-42 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS10085 049f7980eb3caedba8c17529cd15fb6c 351 Pfam PF00293 NUDIX domain 219 335 2.7E-15 T 05-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AC028_RS10085 049f7980eb3caedba8c17529cd15fb6c 351 Pfam PF01467 Cytidylyltransferase-like 9 67 1.4E-9 T 05-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AC028_RS10085 049f7980eb3caedba8c17529cd15fb6c 351 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 9 62 8.4E-11 T 05-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AC028_RS10085 049f7980eb3caedba8c17529cd15fb6c 351 Gene3D G3DSA:3.90.79.10 205 346 3.2E-35 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS10085 049f7980eb3caedba8c17529cd15fb6c 351 SUPERFAMILY SSF55811 204 349 1.76E-29 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS10085 049f7980eb3caedba8c17529cd15fb6c 351 ProSitePatterns PS00893 Nudix box signature. 245 266 - T 05-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AC028_RS10085 049f7980eb3caedba8c17529cd15fb6c 351 SUPERFAMILY SSF52374 9 180 5.07E-20 T 05-07-2017 AC028_RS14360 08e4d74772522c0db34aae6eb31d691a 389 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 333 1.4E-129 T 05-07-2017 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AC028_RS14360 08e4d74772522c0db34aae6eb31d691a 389 Gene3D G3DSA:3.90.25.10 262 335 1.2E-51 T 05-07-2017 AC028_RS14360 08e4d74772522c0db34aae6eb31d691a 389 Gene3D G3DSA:3.90.25.10 178 230 1.2E-51 T 05-07-2017 AC028_RS14360 08e4d74772522c0db34aae6eb31d691a 389 Gene3D G3DSA:3.40.50.720 1 177 5.8E-50 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS14360 08e4d74772522c0db34aae6eb31d691a 389 SUPERFAMILY SSF51735 1 333 4.38E-94 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS14360 08e4d74772522c0db34aae6eb31d691a 389 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 4.6E-56 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS14815 921936fadf4e4bc7a7e7c858111426e7 515 Gene3D G3DSA:2.40.30.20 4 95 1.8E-29 T 05-07-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 AC028_RS14815 921936fadf4e4bc7a7e7c858111426e7 515 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 3 514 49.903 T 05-07-2017 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 AC028_RS14815 921936fadf4e4bc7a7e7c858111426e7 515 SUPERFAMILY SSF52540 98 383 1.89E-95 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS14815 921936fadf4e4bc7a7e7c858111426e7 515 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 368 377 - T 05-07-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AC028_RS14815 921936fadf4e4bc7a7e7c858111426e7 515 SUPERFAMILY SSF50615 12 96 1.59E-25 T 05-07-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AC028_RS14815 921936fadf4e4bc7a7e7c858111426e7 515 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 384 509 3.7E-45 T 05-07-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AC028_RS14815 921936fadf4e4bc7a7e7c858111426e7 515 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 5 511 8.7E-248 T 05-07-2017 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 AC028_RS14815 921936fadf4e4bc7a7e7c858111426e7 515 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 377 6.1E-73 T 05-07-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AC028_RS14815 921936fadf4e4bc7a7e7c858111426e7 515 SUPERFAMILY SSF47917 385 511 1.67E-46 T 05-07-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AC028_RS14815 921936fadf4e4bc7a7e7c858111426e7 515 Gene3D G3DSA:3.40.50.300 96 384 4.4E-115 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS14815 921936fadf4e4bc7a7e7c858111426e7 515 Gene3D G3DSA:1.20.150.20 385 511 1.4E-48 T 05-07-2017 AC028_RS14815 921936fadf4e4bc7a7e7c858111426e7 515 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 94 3.8E-11 T 05-07-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AC028_RS21860 23524367c1ff257c22bb5ac5e8ce915e 699 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 521 537 1.5E-22 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS21860 23524367c1ff257c22bb5ac5e8ce915e 699 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 595 606 1.5E-22 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS21860 23524367c1ff257c22bb5ac5e8ce915e 699 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 482 494 1.5E-22 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS21860 23524367c1ff257c22bb5ac5e8ce915e 699 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 500 512 1.5E-22 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS21860 23524367c1ff257c22bb5ac5e8ce915e 699 Pfam PF05649 Peptidase family M13 61 438 6.7E-85 T 05-07-2017 IPR008753 Peptidase M13, N-terminal domain GO:0006508 AC028_RS21860 23524367c1ff257c22bb5ac5e8ce915e 699 Gene3D G3DSA:3.40.390.10 481 699 2.0E-109 T 05-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AC028_RS21860 23524367c1ff257c22bb5ac5e8ce915e 699 Gene3D G3DSA:3.40.390.10 320 441 2.0E-109 T 05-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AC028_RS21860 23524367c1ff257c22bb5ac5e8ce915e 699 Pfam PF01431 Peptidase family M13 490 695 3.9E-69 T 05-07-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AC028_RS21860 23524367c1ff257c22bb5ac5e8ce915e 699 SUPERFAMILY SSF55486 48 699 8.35E-202 T 05-07-2017 AC028_RS13945 ab3e1f140bf013d346ac2961ada44b37 633 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 18 578 2.9E-163 T 05-07-2017 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AC028_RS13945 ab3e1f140bf013d346ac2961ada44b37 633 Gene3D G3DSA:3.90.226.10 332 440 6.0E-61 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS13945 ab3e1f140bf013d346ac2961ada44b37 633 Gene3D G3DSA:3.90.226.10 478 557 6.0E-61 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS13945 ab3e1f140bf013d346ac2961ada44b37 633 Gene3D G3DSA:3.90.226.10 222 320 4.8E-49 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS13945 ab3e1f140bf013d346ac2961ada44b37 633 Gene3D G3DSA:3.90.226.10 36 178 4.8E-49 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS13945 ab3e1f140bf013d346ac2961ada44b37 633 Pfam PF01343 Peptidase family S49 142 294 6.5E-22 T 05-07-2017 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AC028_RS13945 ab3e1f140bf013d346ac2961ada44b37 633 Pfam PF01343 Peptidase family S49 400 551 4.3E-47 T 05-07-2017 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AC028_RS13945 ab3e1f140bf013d346ac2961ada44b37 633 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 359 547 5.8E-49 T 05-07-2017 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AC028_RS13945 ab3e1f140bf013d346ac2961ada44b37 633 PIRSF PIRSF001217 10 633 1.5E-208 T 05-07-2017 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AC028_RS13945 ab3e1f140bf013d346ac2961ada44b37 633 SUPERFAMILY SSF52096 42 182 7.08E-15 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS13945 ab3e1f140bf013d346ac2961ada44b37 633 SUPERFAMILY SSF52096 214 290 7.08E-15 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS13945 ab3e1f140bf013d346ac2961ada44b37 633 SUPERFAMILY SSF52096 477 537 2.03E-40 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS13945 ab3e1f140bf013d346ac2961ada44b37 633 SUPERFAMILY SSF52096 328 448 2.03E-40 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS05975 798349b0a409d6d2be74800bc7115ea8 270 Pfam PF01026 TatD related DNase 4 259 2.3E-69 T 05-07-2017 IPR001130 TatD family GO:0016788 AC028_RS05975 798349b0a409d6d2be74800bc7115ea8 270 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 05-07-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AC028_RS05975 798349b0a409d6d2be74800bc7115ea8 270 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 192 208 - T 05-07-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AC028_RS05975 798349b0a409d6d2be74800bc7115ea8 270 Gene3D G3DSA:3.20.20.140 1 261 8.8E-87 T 05-07-2017 AC028_RS05975 798349b0a409d6d2be74800bc7115ea8 270 PIRSF PIRSF005902 1 264 4.2E-72 T 05-07-2017 IPR001130 TatD family GO:0016788 AC028_RS05975 798349b0a409d6d2be74800bc7115ea8 270 SUPERFAMILY SSF51556 3 261 3.28E-82 T 05-07-2017 IPR032466 Metal-dependent hydrolase AC028_RS13435 ce9d3a13deef267f5c173dbd76304f14 251 Gene3D G3DSA:3.40.50.720 2 232 2.5E-62 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS13435 ce9d3a13deef267f5c173dbd76304f14 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 8.2E-23 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13435 ce9d3a13deef267f5c173dbd76304f14 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 8.2E-23 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13435 ce9d3a13deef267f5c173dbd76304f14 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 8.2E-23 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13435 ce9d3a13deef267f5c173dbd76304f14 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.2E-23 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13435 ce9d3a13deef267f5c173dbd76304f14 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 8.2E-23 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13435 ce9d3a13deef267f5c173dbd76304f14 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 4.9E-9 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13435 ce9d3a13deef267f5c173dbd76304f14 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 4.9E-9 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13435 ce9d3a13deef267f5c173dbd76304f14 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 4.9E-9 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13435 ce9d3a13deef267f5c173dbd76304f14 251 SUPERFAMILY SSF51735 3 227 6.02E-60 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS13435 ce9d3a13deef267f5c173dbd76304f14 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 05-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AC028_RS13435 ce9d3a13deef267f5c173dbd76304f14 251 Pfam PF00106 short chain dehydrogenase 3 187 1.3E-52 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS00320 b5e28f51535189dd41f5fe5d6099b565 254 SMART SM00382 26 230 3.2E-5 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS00320 b5e28f51535189dd41f5fe5d6099b565 254 Pfam PF00005 ABC transporter 17 172 9.7E-22 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS00320 b5e28f51535189dd41f5fe5d6099b565 254 SUPERFAMILY SSF52540 2 243 9.35E-42 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS00320 b5e28f51535189dd41f5fe5d6099b565 254 Gene3D G3DSA:3.40.50.300 1 242 8.4E-47 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS00320 b5e28f51535189dd41f5fe5d6099b565 254 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 242 1.3E-109 T 05-07-2017 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 AC028_RS05205 7e919009cfea929ddd9555960b5cfd11 345 Pfam PF01734 Patatin-like phospholipase 51 207 6.0E-27 T 05-07-2017 IPR002641 Patatin/Phospholipase A2-related GO:0006629 AC028_RS05205 7e919009cfea929ddd9555960b5cfd11 345 Gene3D G3DSA:3.40.1090.10 50 207 3.2E-13 T 05-07-2017 AC028_RS05205 7e919009cfea929ddd9555960b5cfd11 345 SUPERFAMILY SSF52151 41 296 3.4E-56 T 05-07-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AC028_RS09470 2d733ec3c6fb16d6c57a6f558e430a7d 151 TIGRFAM TIGR02561 HrpB1_HrpK: type III secretion protein HrpB1/HrpK 2 145 1.7E-57 T 05-07-2017 IPR013394 Type III secretion system, HrpB1/HrpK AC028_RS09470 2d733ec3c6fb16d6c57a6f558e430a7d 151 Pfam PF09613 Bacterial type III secretion protein (HrpB1_HrpK) 2 124 4.2E-44 T 05-07-2017 IPR013394 Type III secretion system, HrpB1/HrpK AC028_RS07820 9e0088c192bfb11ee67a00d6ff729475 313 PIRSF PIRSF016660 1 311 2.1E-112 T 05-07-2017 IPR008526 Inner membrane protein YedI AC028_RS07820 9e0088c192bfb11ee67a00d6ff729475 313 Pfam PF05661 Protein of unknown function (DUF808) 4 297 3.4E-111 T 05-07-2017 IPR008526 Inner membrane protein YedI AC028_RS15910 ba4034279eb757d7dbcd7c0313bf8c19 920 Pfam PF07715 TonB-dependent Receptor Plug Domain 141 246 1.2E-5 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS15910 ba4034279eb757d7dbcd7c0313bf8c19 920 SMART SM00965 51 102 6.4E-10 T 05-07-2017 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AC028_RS15910 ba4034279eb757d7dbcd7c0313bf8c19 920 Gene3D G3DSA:2.170.130.10 141 256 9.0E-6 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS15910 ba4034279eb757d7dbcd7c0313bf8c19 920 Gene3D G3DSA:2.40.170.20 410 608 4.0E-4 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS15910 ba4034279eb757d7dbcd7c0313bf8c19 920 SUPERFAMILY SSF56935 131 267 2.38E-48 T 05-07-2017 AC028_RS15910 ba4034279eb757d7dbcd7c0313bf8c19 920 SUPERFAMILY SSF56935 537 630 2.38E-48 T 05-07-2017 AC028_RS15910 ba4034279eb757d7dbcd7c0313bf8c19 920 SUPERFAMILY SSF56935 295 502 2.38E-48 T 05-07-2017 AC028_RS15910 ba4034279eb757d7dbcd7c0313bf8c19 920 SUPERFAMILY SSF56935 665 920 2.38E-48 T 05-07-2017 AC028_RS16680 2af7fe89f8c15fe63a2595c034f53713 176 Hamap MF_00825 3-hydroxyanthranilate 3,4-dioxygenase [nbaC]. 2 168 37.655 T 05-07-2017 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 AC028_RS16680 2af7fe89f8c15fe63a2595c034f53713 176 Pfam PF06052 3-hydroxyanthranilic acid dioxygenase 3 150 2.3E-76 T 05-07-2017 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 AC028_RS16680 2af7fe89f8c15fe63a2595c034f53713 176 Gene3D G3DSA:2.60.120.10 4 108 3.1E-21 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS16680 2af7fe89f8c15fe63a2595c034f53713 176 TIGRFAM TIGR03037 anthran_nbaC: 3-hydroxyanthranilate 3,4-dioxygenase 6 163 2.5E-79 T 05-07-2017 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 AC028_RS16680 2af7fe89f8c15fe63a2595c034f53713 176 SUPERFAMILY SSF51182 1 168 2.09E-57 T 05-07-2017 IPR011051 RmlC-like cupin domain AC028_RS05795 5201f8a2b277fba9f6b9305af07a6992 220 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 58 149 1.6E-5 T 05-07-2017 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 AC028_RS05795 5201f8a2b277fba9f6b9305af07a6992 220 Gene3D G3DSA:3.40.50.1820 13 216 9.8E-45 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS05795 5201f8a2b277fba9f6b9305af07a6992 220 SUPERFAMILY SSF53474 12 216 6.6E-46 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS16300 0c5c5535104202b4f78ded3d51bcdd65 455 Gene3D G3DSA:1.10.275.10 2 119 3.6E-46 T 05-07-2017 IPR024083 Fumarase/histidase, N-terminal AC028_RS16300 0c5c5535104202b4f78ded3d51bcdd65 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 05-07-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 AC028_RS16300 0c5c5535104202b4f78ded3d51bcdd65 455 SUPERFAMILY SSF48557 10 452 8.01E-103 T 05-07-2017 IPR008948 L-Aspartase-like GO:0003824 AC028_RS16300 0c5c5535104202b4f78ded3d51bcdd65 455 Gene3D G3DSA:1.10.40.30 390 445 2.0E-30 T 05-07-2017 AC028_RS16300 0c5c5535104202b4f78ded3d51bcdd65 455 Pfam PF00206 Lyase 14 312 2.7E-60 T 05-07-2017 IPR022761 Fumarate lyase, N-terminal AC028_RS16300 0c5c5535104202b4f78ded3d51bcdd65 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 1.7E-48 T 05-07-2017 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 AC028_RS16300 0c5c5535104202b4f78ded3d51bcdd65 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 451 3.2E-118 T 05-07-2017 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AC028_RS16300 0c5c5535104202b4f78ded3d51bcdd65 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 3.0E-17 T 05-07-2017 IPR000362 Fumarate lyase family AC028_RS16300 0c5c5535104202b4f78ded3d51bcdd65 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 3.0E-17 T 05-07-2017 IPR000362 Fumarate lyase family AC028_RS16300 0c5c5535104202b4f78ded3d51bcdd65 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 3.0E-17 T 05-07-2017 IPR000362 Fumarate lyase family AC028_RS16300 0c5c5535104202b4f78ded3d51bcdd65 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 3.0E-17 T 05-07-2017 IPR000362 Fumarate lyase family AC028_RS16300 0c5c5535104202b4f78ded3d51bcdd65 455 Gene3D G3DSA:1.20.200.10 120 389 6.1E-87 T 05-07-2017 AC028_RS18000 2efb02ad2d32adf087f97296868ed403 315 Pfam PF04397 LytTr DNA-binding domain 208 300 5.2E-25 T 05-07-2017 IPR007492 LytTR DNA-binding domain GO:0003677 AC028_RS18000 2efb02ad2d32adf087f97296868ed403 315 SMART SM00850 205 302 3.2E-32 T 05-07-2017 IPR007492 LytTR DNA-binding domain GO:0003677 AC028_RS18000 2efb02ad2d32adf087f97296868ed403 315 PIRSF PIRSF031767 10 315 8.6E-129 T 05-07-2017 IPR012379 LytTR MHYE transcriptional regulator, putative AC028_RS18000 2efb02ad2d32adf087f97296868ed403 315 Gene3D G3DSA:2.40.50.40 197 263 3.0E-18 T 05-07-2017 AC028_RS13100 6895907c8eed00a81ddc5f7b7046521b 771 SUPERFAMILY SSF48452 394 439 1.64E-6 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS13100 6895907c8eed00a81ddc5f7b7046521b 771 SUPERFAMILY SSF48452 67 170 1.64E-6 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS13100 6895907c8eed00a81ddc5f7b7046521b 771 SUPERFAMILY SSF48452 483 532 1.64E-6 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS13100 6895907c8eed00a81ddc5f7b7046521b 771 Gene3D G3DSA:1.25.40.10 478 556 6.6E-6 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS13100 6895907c8eed00a81ddc5f7b7046521b 771 Gene3D G3DSA:1.25.40.10 231 271 3.3E-5 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS18870 00f0e81862b368d59b3495f165080967 389 SUPERFAMILY SSF51735 162 351 9.44E-61 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS18870 00f0e81862b368d59b3495f165080967 389 SUPERFAMILY SSF50129 2 188 3.62E-54 T 05-07-2017 IPR011032 GroES-like AC028_RS18870 00f0e81862b368d59b3495f165080967 389 Pfam PF00107 Zinc-binding dehydrogenase 196 266 4.7E-14 T 05-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AC028_RS18870 00f0e81862b368d59b3495f165080967 389 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 149 3.5E-25 T 05-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AC028_RS18870 00f0e81862b368d59b3495f165080967 389 Pfam PF13823 Alcohol dehydrogenase GroES-associated 2 22 3.6E-6 T 05-07-2017 IPR027399 Alcohol dehydrogenase GroES-associated AC028_RS18870 00f0e81862b368d59b3495f165080967 389 Gene3D G3DSA:3.40.50.720 187 346 1.1E-60 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS18870 00f0e81862b368d59b3495f165080967 389 Gene3D G3DSA:3.90.180.10 2 186 1.0E-49 T 05-07-2017 IPR011032 GroES-like AC028_RS18870 00f0e81862b368d59b3495f165080967 389 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 05-07-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AC028_RS06995 73ad86c6a971aaa13400c2000cffe47d 574 Pfam PF02096 60Kd inner membrane protein 380 558 3.8E-55 T 05-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AC028_RS06995 73ad86c6a971aaa13400c2000cffe47d 574 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 561 22.239 T 05-07-2017 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 AC028_RS06995 73ad86c6a971aaa13400c2000cffe47d 574 Pfam PF14849 YidC periplasmic domain 91 369 1.9E-64 T 05-07-2017 IPR028053 Membrane insertase YidC, N-terminal AC028_RS06995 73ad86c6a971aaa13400c2000cffe47d 574 PRINTS PR01900 YidC translocation/secretion protein signature 494 509 1.9E-17 T 05-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AC028_RS06995 73ad86c6a971aaa13400c2000cffe47d 574 PRINTS PR01900 YidC translocation/secretion protein signature 514 538 1.9E-17 T 05-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AC028_RS06995 73ad86c6a971aaa13400c2000cffe47d 574 PRINTS PR01900 YidC translocation/secretion protein signature 365 381 1.9E-17 T 05-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AC028_RS06995 73ad86c6a971aaa13400c2000cffe47d 574 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 377 1.2E-67 T 05-07-2017 IPR028053 Membrane insertase YidC, N-terminal AC028_RS06995 73ad86c6a971aaa13400c2000cffe47d 574 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 379 558 2.6E-65 T 05-07-2017 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AC028_RS06995 73ad86c6a971aaa13400c2000cffe47d 574 PRINTS PR00701 60kDa inner membrane protein signature 2 23 7.6E-50 T 05-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AC028_RS06995 73ad86c6a971aaa13400c2000cffe47d 574 PRINTS PR00701 60kDa inner membrane protein signature 441 464 7.6E-50 T 05-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AC028_RS06995 73ad86c6a971aaa13400c2000cffe47d 574 PRINTS PR00701 60kDa inner membrane protein signature 240 258 7.6E-50 T 05-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AC028_RS06995 73ad86c6a971aaa13400c2000cffe47d 574 PRINTS PR00701 60kDa inner membrane protein signature 488 510 7.6E-50 T 05-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AC028_RS06995 73ad86c6a971aaa13400c2000cffe47d 574 PRINTS PR00701 60kDa inner membrane protein signature 184 204 7.6E-50 T 05-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AC028_RS06995 73ad86c6a971aaa13400c2000cffe47d 574 PRINTS PR00701 60kDa inner membrane protein signature 274 289 7.6E-50 T 05-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AC028_RS06995 73ad86c6a971aaa13400c2000cffe47d 574 PRINTS PR00701 60kDa inner membrane protein signature 525 548 7.6E-50 T 05-07-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AC028_RS08770 d6cdf96c2a966358b9b653073acc9424 147 PRINTS PR00502 NUDIX hydrolase family signature 52 67 3.5E-6 T 05-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AC028_RS08770 d6cdf96c2a966358b9b653073acc9424 147 PRINTS PR00502 NUDIX hydrolase family signature 38 52 3.5E-6 T 05-07-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AC028_RS08770 d6cdf96c2a966358b9b653073acc9424 147 SUPERFAMILY SSF55811 7 141 2.44E-30 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS08770 d6cdf96c2a966358b9b653073acc9424 147 Pfam PF00293 NUDIX domain 10 128 2.6E-19 T 05-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AC028_RS08770 d6cdf96c2a966358b9b653073acc9424 147 Gene3D G3DSA:3.90.79.10 3 139 2.1E-31 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS08770 d6cdf96c2a966358b9b653073acc9424 147 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 05-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AC028_RS03925 397057c3041f9429a45962a7cd4da96a 444 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 14 444 67.754 T 05-07-2017 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AC028_RS03925 397057c3041f9429a45962a7cd4da96a 444 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 426 436 - T 05-07-2017 IPR030391 RNA methyltransferase TrmA, conserved site AC028_RS03925 397057c3041f9429a45962a7cd4da96a 444 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 374 404 - T 05-07-2017 IPR030390 RNA methyltransferase TrmA, active site AC028_RS03925 397057c3041f9429a45962a7cd4da96a 444 Gene3D G3DSA:3.40.50.150 262 443 3.9E-55 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS03925 397057c3041f9429a45962a7cd4da96a 444 SUPERFAMILY SSF53335 75 443 5.48E-82 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS03925 397057c3041f9429a45962a7cd4da96a 444 Gene3D G3DSA:2.40.50.140 13 86 6.8E-25 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS03925 397057c3041f9429a45962a7cd4da96a 444 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 264 436 2.9E-56 T 05-07-2017 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AC028_RS03925 397057c3041f9429a45962a7cd4da96a 444 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 274 443 1.5E-23 T 05-07-2017 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AC028_RS03925 397057c3041f9429a45962a7cd4da96a 444 SUPERFAMILY SSF50249 14 73 3.83E-10 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS09750 abf29b4468c06aaaec06c2cd428ec68c 959 SUPERFAMILY SSF63411 41 251 8.98E-51 T 05-07-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AC028_RS09750 abf29b4468c06aaaec06c2cd428ec68c 959 SUPERFAMILY SSF63411 747 942 2.67E-30 T 05-07-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AC028_RS09750 abf29b4468c06aaaec06c2cd428ec68c 959 Gene3D G3DSA:3.30.830.10 40 263 6.5E-50 T 05-07-2017 IPR011237 Peptidase M16 domain GO:0046872 AC028_RS09750 abf29b4468c06aaaec06c2cd428ec68c 959 Gene3D G3DSA:3.30.830.10 293 455 2.2E-16 T 05-07-2017 IPR011237 Peptidase M16 domain GO:0046872 AC028_RS09750 abf29b4468c06aaaec06c2cd428ec68c 959 Gene3D G3DSA:3.30.830.10 747 932 6.5E-22 T 05-07-2017 IPR011237 Peptidase M16 domain GO:0046872 AC028_RS09750 abf29b4468c06aaaec06c2cd428ec68c 959 Pfam PF00675 Insulinase (Peptidase family M16) 529 652 1.1E-6 T 05-07-2017 IPR011765 Peptidase M16, N-terminal AC028_RS09750 abf29b4468c06aaaec06c2cd428ec68c 959 Pfam PF00675 Insulinase (Peptidase family M16) 56 192 6.3E-15 T 05-07-2017 IPR011765 Peptidase M16, N-terminal AC028_RS09750 abf29b4468c06aaaec06c2cd428ec68c 959 Gene3D G3DSA:3.30.830.10 517 733 1.0E-42 T 05-07-2017 IPR011237 Peptidase M16 domain GO:0046872 AC028_RS09750 abf29b4468c06aaaec06c2cd428ec68c 959 Pfam PF05193 Peptidase M16 inactive domain 684 864 6.5E-29 T 05-07-2017 IPR007863 Peptidase M16, C-terminal AC028_RS09750 abf29b4468c06aaaec06c2cd428ec68c 959 Pfam PF05193 Peptidase M16 inactive domain 213 386 2.3E-29 T 05-07-2017 IPR007863 Peptidase M16, C-terminal AC028_RS09750 abf29b4468c06aaaec06c2cd428ec68c 959 SUPERFAMILY SSF63411 506 733 1.47E-42 T 05-07-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AC028_RS09750 abf29b4468c06aaaec06c2cd428ec68c 959 SUPERFAMILY SSF63411 273 463 4.0E-29 T 05-07-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AC028_RS10590 114ca1993d8b4b16a4e4db23038adbee 151 Pfam PF02381 MraZ protein, putative antitoxin-like 88 136 3.0E-12 T 05-07-2017 IPR020603 MraZ domain AC028_RS10590 114ca1993d8b4b16a4e4db23038adbee 151 Pfam PF02381 MraZ protein, putative antitoxin-like 5 78 3.0E-8 T 05-07-2017 IPR020603 MraZ domain AC028_RS10590 114ca1993d8b4b16a4e4db23038adbee 151 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 151 40.772 T 05-07-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AC028_RS10590 114ca1993d8b4b16a4e4db23038adbee 151 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 4 128 6.0E-69 T 05-07-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AC028_RS10590 114ca1993d8b4b16a4e4db23038adbee 151 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 5 149 4.7E-29 T 05-07-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AC028_RS10590 114ca1993d8b4b16a4e4db23038adbee 151 SUPERFAMILY SSF89447 3 139 4.34E-36 T 05-07-2017 AC028_RS17485 b00690411459a3d74bd14fc22d9633ff 107 SUPERFAMILY SSF54862 2 86 6.9E-24 T 05-07-2017 AC028_RS17485 b00690411459a3d74bd14fc22d9633ff 107 Pfam PF00037 4Fe-4S binding domain 34 56 3.4E-7 T 05-07-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AC028_RS17485 b00690411459a3d74bd14fc22d9633ff 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 107 7.6E-18 T 05-07-2017 IPR022569 Ferredoxin, C-terminal AC028_RS17485 b00690411459a3d74bd14fc22d9633ff 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.6E-16 T 05-07-2017 IPR000813 7Fe ferredoxin GO:0009055 AC028_RS17485 b00690411459a3d74bd14fc22d9633ff 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.6E-16 T 05-07-2017 IPR000813 7Fe ferredoxin GO:0009055 AC028_RS17485 b00690411459a3d74bd14fc22d9633ff 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.6E-16 T 05-07-2017 IPR000813 7Fe ferredoxin GO:0009055 AC028_RS17485 b00690411459a3d74bd14fc22d9633ff 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 05-07-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AC028_RS17485 b00690411459a3d74bd14fc22d9633ff 107 Gene3D G3DSA:3.30.70.20 3 95 1.9E-21 T 05-07-2017 AC028_RS10790 6156f766621e237400a902f8f867b6ce 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 404 424 3.8E-51 T 05-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AC028_RS10790 6156f766621e237400a902f8f867b6ce 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 601 630 3.8E-51 T 05-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AC028_RS10790 6156f766621e237400a902f8f867b6ce 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 257 272 3.8E-51 T 05-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AC028_RS10790 6156f766621e237400a902f8f867b6ce 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 146 159 3.8E-51 T 05-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AC028_RS10790 6156f766621e237400a902f8f867b6ce 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 559 579 3.8E-51 T 05-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AC028_RS10790 6156f766621e237400a902f8f867b6ce 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 735 761 3.8E-51 T 05-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AC028_RS10790 6156f766621e237400a902f8f867b6ce 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 199 215 3.8E-51 T 05-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AC028_RS10790 6156f766621e237400a902f8f867b6ce 904 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 561 573 - T 05-07-2017 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AC028_RS10790 6156f766621e237400a902f8f867b6ce 904 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 10 904 17.215 T 05-07-2017 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AC028_RS10790 6156f766621e237400a902f8f867b6ce 904 Gene3D G3DSA:1.20.1440.90 287 407 1.2E-10 T 05-07-2017 AC028_RS10790 6156f766621e237400a902f8f867b6ce 904 SUPERFAMILY SSF51621 18 904 6.12E-258 T 05-07-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AC028_RS10790 6156f766621e237400a902f8f867b6ce 904 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 147 158 - T 05-07-2017 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AC028_RS10790 6156f766621e237400a902f8f867b6ce 904 Pfam PF00311 Phosphoenolpyruvate carboxylase 142 904 6.8E-221 T 05-07-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AC028_RS14980 237f6c3425a3a48a612da19a299548ec 320 Pfam PF00756 Putative esterase 57 252 5.7E-14 T 05-07-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 AC028_RS14980 237f6c3425a3a48a612da19a299548ec 320 Gene3D G3DSA:3.40.50.1820 51 316 1.1E-60 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS14980 237f6c3425a3a48a612da19a299548ec 320 SUPERFAMILY SSF53474 44 315 9.75E-47 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS17865 1d8acaecff15e67212a56eecffc03979 476 Pfam PF13520 Amino acid permease 27 442 3.1E-61 T 05-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AC028_RS17865 1d8acaecff15e67212a56eecffc03979 476 PIRSF PIRSF006060 10 475 1.2E-94 T 05-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AC028_RS00360 0765391c0a85fc27176f72f1334bd608 213 Pfam PF16357 Putative PepSY_TM-like 18 213 8.5E-85 T 05-07-2017 IPR032307 Putative PepSY TM-like protein AC028_RS10250 705e1269b9a9ed54cce7632e479d85c1 902 SUPERFAMILY SSF56935 270 475 1.31E-83 T 05-07-2017 AC028_RS10250 705e1269b9a9ed54cce7632e479d85c1 902 SUPERFAMILY SSF56935 740 900 1.31E-83 T 05-07-2017 AC028_RS10250 705e1269b9a9ed54cce7632e479d85c1 902 SUPERFAMILY SSF56935 40 241 1.31E-83 T 05-07-2017 AC028_RS10250 705e1269b9a9ed54cce7632e479d85c1 902 SUPERFAMILY SSF56935 519 713 1.31E-83 T 05-07-2017 AC028_RS10250 705e1269b9a9ed54cce7632e479d85c1 902 Gene3D G3DSA:2.170.130.10 75 175 1.5E-18 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS10250 705e1269b9a9ed54cce7632e479d85c1 902 Pfam PF00593 TonB dependent receptor 616 899 1.4E-23 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS10250 705e1269b9a9ed54cce7632e479d85c1 902 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 172 5.2E-15 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS10250 705e1269b9a9ed54cce7632e479d85c1 902 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 48 900 3.3E-221 T 05-07-2017 IPR010104 Bacterial TonB-dependent receptor AC028_RS10250 705e1269b9a9ed54cce7632e479d85c1 902 Gene3D G3DSA:2.40.170.20 539 899 2.2E-64 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS10250 705e1269b9a9ed54cce7632e479d85c1 902 Gene3D G3DSA:2.40.170.20 176 489 2.2E-64 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS04640 1977a9e53ad9c2acef3bab4845084dcf 160 Gene3D G3DSA:3.40.50.360 3 146 8.6E-23 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS04640 1977a9e53ad9c2acef3bab4845084dcf 160 TIGRFAM TIGR01754 flav_RNR: putative ribonucleotide reductase-associated flavodoxin 1 144 5.3E-55 T 05-07-2017 IPR010088 Ribonucleotide reductase-associated flavodoxin, putative AC028_RS04640 1977a9e53ad9c2acef3bab4845084dcf 160 Pfam PF00258 Flavodoxin 8 114 1.3E-7 T 05-07-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AC028_RS04640 1977a9e53ad9c2acef3bab4845084dcf 160 SUPERFAMILY SSF52218 1 153 8.76E-24 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS09350 0c64a3c51c88e70ec970faf53e36d5ba 117 SUPERFAMILY SSF89946 8 112 6.41E-17 T 05-07-2017 IPR009671 Regulator of ribonuclease activity B domain AC028_RS09350 0c64a3c51c88e70ec970faf53e36d5ba 117 Pfam PF06877 Regulator of ribonuclease activity B 11 109 1.7E-18 T 05-07-2017 IPR009671 Regulator of ribonuclease activity B domain AC028_RS09350 0c64a3c51c88e70ec970faf53e36d5ba 117 Gene3D G3DSA:3.30.70.970 8 112 1.3E-8 T 05-07-2017 IPR009671 Regulator of ribonuclease activity B domain AC028_RS19580 ea35cd6f05a2c9d34c97b099c9b32566 144 Pfam PF07681 DoxX 15 100 1.2E-15 T 05-07-2017 IPR032808 DoxX family AC028_RS00780 91a6637c086382224ee816e97a913b87 180 PRINTS PR01100 Shikimate kinase family signature 59 67 1.4E-21 T 05-07-2017 AC028_RS00780 91a6637c086382224ee816e97a913b87 180 PRINTS PR01100 Shikimate kinase family signature 7 22 1.4E-21 T 05-07-2017 AC028_RS00780 91a6637c086382224ee816e97a913b87 180 PRINTS PR01100 Shikimate kinase family signature 31 44 1.4E-21 T 05-07-2017 AC028_RS00780 91a6637c086382224ee816e97a913b87 180 PRINTS PR01100 Shikimate kinase family signature 77 86 1.4E-21 T 05-07-2017 AC028_RS00780 91a6637c086382224ee816e97a913b87 180 PRINTS PR01100 Shikimate kinase family signature 98 115 1.4E-21 T 05-07-2017 AC028_RS00780 91a6637c086382224ee816e97a913b87 180 Gene3D G3DSA:3.40.50.300 4 167 7.4E-49 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS00780 91a6637c086382224ee816e97a913b87 180 Pfam PF01202 Shikimate kinase 13 167 1.3E-47 T 05-07-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AC028_RS00780 91a6637c086382224ee816e97a913b87 180 SUPERFAMILY SSF52540 5 165 2.75E-29 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS00780 91a6637c086382224ee816e97a913b87 180 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 27.177 T 05-07-2017 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AC028_RS00780 91a6637c086382224ee816e97a913b87 180 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 05-07-2017 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AC028_RS08360 e2598a779ddee19a8844a7c2b547e15c 129 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 17 122 1.2E-35 T 05-07-2017 IPR012657 23S rRNA-intervening sequence protein AC028_RS08360 e2598a779ddee19a8844a7c2b547e15c 129 Pfam PF05635 23S rRNA-intervening sequence protein 12 116 6.7E-36 T 05-07-2017 IPR012657 23S rRNA-intervening sequence protein AC028_RS08360 e2598a779ddee19a8844a7c2b547e15c 129 Gene3D G3DSA:1.20.1440.60 9 123 9.9E-36 T 05-07-2017 IPR012657 23S rRNA-intervening sequence protein AC028_RS08360 e2598a779ddee19a8844a7c2b547e15c 129 SUPERFAMILY SSF158446 10 123 1.07E-36 T 05-07-2017 AC028_RS08765 7007e17b2ece96233454535e6432cadb 218 Gene3D G3DSA:3.40.50.720 1 208 4.3E-41 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS08765 7007e17b2ece96233454535e6432cadb 218 Pfam PF13460 NAD(P)H-binding 8 194 6.2E-44 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS08765 7007e17b2ece96233454535e6432cadb 218 SUPERFAMILY SSF51735 1 205 8.49E-35 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS10695 59302cfebec3314c59dec517b9ae329e 275 Pfam PF02219 Methylenetetrahydrofolate reductase 3 274 1.0E-86 T 05-07-2017 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AC028_RS10695 59302cfebec3314c59dec517b9ae329e 275 SUPERFAMILY SSF51730 3 274 3.14E-91 T 05-07-2017 IPR029041 FAD-linked oxidoreductase-like AC028_RS10695 59302cfebec3314c59dec517b9ae329e 275 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 4 273 3.5E-102 T 05-07-2017 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 AC028_RS10695 59302cfebec3314c59dec517b9ae329e 275 Gene3D G3DSA:3.20.20.220 3 274 3.2E-100 T 05-07-2017 IPR029041 FAD-linked oxidoreductase-like AC028_RS07285 59e4d6502772087f369f8bcacd5b37d5 451 Pfam PF03600 Citrate transporter 274 446 7.8E-9 T 05-07-2017 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 AC028_RS07285 59e4d6502772087f369f8bcacd5b37d5 451 Pfam PF07158 Dicarboxylate carrier protein MatC N-terminus 1 149 6.2E-69 T 05-07-2017 IPR009827 Dicarboxylate carrier MatC N-terminal AC028_RS06825 c022251c763b61dbe5d8cf6cf98c5841 178 Pfam PF07484 Phage Tail Collar Domain 7 61 2.4E-20 T 05-07-2017 IPR011083 Phage tail collar domain AC028_RS06825 c022251c763b61dbe5d8cf6cf98c5841 178 SUPERFAMILY SSF88874 1 172 9.94E-42 T 05-07-2017 AC028_RS06825 c022251c763b61dbe5d8cf6cf98c5841 178 Gene3D G3DSA:3.90.1340.10 1 66 7.7E-23 T 05-07-2017 IPR011083 Phage tail collar domain AC028_RS05905 e7b60564ecbab628b162d9f85a891bbc 418 PIRSF PIRSF000524 13 418 8.7E-109 T 05-07-2017 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 AC028_RS05905 e7b60564ecbab628b162d9f85a891bbc 418 Gene3D G3DSA:3.40.640.10 30 289 2.0E-60 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS05905 e7b60564ecbab628b162d9f85a891bbc 418 Gene3D G3DSA:3.90.1150.10 290 396 9.2E-33 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS05905 e7b60564ecbab628b162d9f85a891bbc 418 Pfam PF00266 Aminotransferase class-V 36 356 1.2E-23 T 05-07-2017 IPR000192 Aminotransferase class V domain AC028_RS05905 e7b60564ecbab628b162d9f85a891bbc 418 SUPERFAMILY SSF53383 17 395 1.46E-90 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS07885 3442e6848baf8b220865e9c3010f3a22 143 Gene3D G3DSA:3.10.450.50 30 121 3.5E-4 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS07885 3442e6848baf8b220865e9c3010f3a22 143 Pfam PF06903 VirK protein 26 120 2.6E-38 T 05-07-2017 IPR010694 Uncharacterised protein family VirK AC028_RS00960 09b1791d9d27c568803df88c85da95e7 455 SUPERFAMILY SSF103473 63 444 1.05E-22 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS00960 09b1791d9d27c568803df88c85da95e7 455 Pfam PF07690 Major Facilitator Superfamily 77 353 1.8E-13 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS00960 09b1791d9d27c568803df88c85da95e7 455 Gene3D G3DSA:1.20.1250.20 28 219 4.1E-12 T 05-07-2017 AC028_RS03005 b72bd033e1d9440816b838165486811d 186 Gene3D G3DSA:1.25.40.10 86 185 1.2E-35 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS03005 b72bd033e1d9440816b838165486811d 186 Gene3D G3DSA:1.20.58.320 8 85 7.4E-31 T 05-07-2017 AC028_RS03005 b72bd033e1d9440816b838165486811d 186 SUPERFAMILY SSF48452 10 182 8.72E-58 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS03005 b72bd033e1d9440816b838165486811d 186 Pfam PF06041 Bacterial protein of unknown function (DUF924) 16 183 3.8E-54 T 05-07-2017 IPR010323 Protein of unknown function DUF924 AC028_RS14280 125123be6e9307ed596c1c9c72710db3 713 Gene3D G3DSA:2.170.130.10 30 178 4.5E-31 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS14280 125123be6e9307ed596c1c9c72710db3 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 168 9.8E-17 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS14280 125123be6e9307ed596c1c9c72710db3 713 Gene3D G3DSA:2.40.170.20 182 713 4.1E-139 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS14280 125123be6e9307ed596c1c9c72710db3 713 Pfam PF00593 TonB dependent receptor 471 712 1.8E-32 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS14280 125123be6e9307ed596c1c9c72710db3 713 SUPERFAMILY SSF56935 29 713 4.19E-130 T 05-07-2017 AC028_RS14280 125123be6e9307ed596c1c9c72710db3 713 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 68 713 1.6E-101 T 05-07-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AC028_RS17130 9f7689e6e2e1f0949e3068c1a9f47703 312 Pfam PF00535 Glycosyl transferase family 2 13 126 1.8E-20 T 05-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AC028_RS17130 9f7689e6e2e1f0949e3068c1a9f47703 312 SUPERFAMILY SSF53448 12 293 1.48E-47 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS17130 9f7689e6e2e1f0949e3068c1a9f47703 312 Gene3D G3DSA:3.90.550.10 10 233 2.4E-45 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS07170 5cfaa97b9b5d85b9f3b3a9938d00abc9 357 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 47 321 1.6E-53 T 05-07-2017 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 AC028_RS07170 5cfaa97b9b5d85b9f3b3a9938d00abc9 357 SUPERFAMILY SSF51445 43 346 6.09E-80 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS07170 5cfaa97b9b5d85b9f3b3a9938d00abc9 357 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 167 176 - T 05-07-2017 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 AC028_RS07170 5cfaa97b9b5d85b9f3b3a9938d00abc9 357 Gene3D G3DSA:3.20.20.80 43 351 9.6E-98 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS12420 bb6e9eec2b4029deb00c9e03b4e5cd2c 158 SUPERFAMILY SSF49764 23 146 4.19E-38 T 05-07-2017 IPR008978 HSP20-like chaperone AC028_RS12420 bb6e9eec2b4029deb00c9e03b4e5cd2c 158 Gene3D G3DSA:2.60.40.790 10 146 1.5E-42 T 05-07-2017 IPR008978 HSP20-like chaperone AC028_RS12420 bb6e9eec2b4029deb00c9e03b4e5cd2c 158 Pfam PF00011 Hsp20/alpha crystallin family 47 146 2.1E-24 T 05-07-2017 IPR002068 Alpha crystallin/Hsp20 domain AC028_RS15200 ec52778f355e304bb5f9b73b4705851f 351 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 321 4.7E-95 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS15200 ec52778f355e304bb5f9b73b4705851f 351 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 336 8.7E-151 T 05-07-2017 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 AC028_RS15200 ec52778f355e304bb5f9b73b4705851f 351 Gene3D G3DSA:3.40.50.720 4 190 1.8E-60 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS15200 ec52778f355e304bb5f9b73b4705851f 351 Gene3D G3DSA:3.90.25.10 191 335 3.6E-55 T 05-07-2017 AC028_RS15200 ec52778f355e304bb5f9b73b4705851f 351 SUPERFAMILY SSF51735 3 342 6.11E-90 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS06295 c245e3eb36f43af66e5ea52d40416b71 322 Pfam PF07859 alpha/beta hydrolase fold 82 289 1.5E-66 T 05-07-2017 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AC028_RS06295 c245e3eb36f43af66e5ea52d40416b71 322 SUPERFAMILY SSF53474 19 312 1.4E-69 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS06295 c245e3eb36f43af66e5ea52d40416b71 322 Gene3D G3DSA:3.40.50.1820 3 312 5.5E-87 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS10455 2fe8846c10bd718e8e9ac21c2ced83b2 417 SUPERFAMILY SSF53383 8 417 4.64E-181 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS10455 2fe8846c10bd718e8e9ac21c2ced83b2 417 Gene3D G3DSA:3.90.1150.10 286 417 2.5E-55 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS10455 2fe8846c10bd718e8e9ac21c2ced83b2 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 5.3E-183 T 05-07-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AC028_RS10455 2fe8846c10bd718e8e9ac21c2ced83b2 417 PIRSF PIRSF000412 2 417 1.3E-169 T 05-07-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AC028_RS10455 2fe8846c10bd718e8e9ac21c2ced83b2 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 52.96 T 05-07-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AC028_RS10455 2fe8846c10bd718e8e9ac21c2ced83b2 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 05-07-2017 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AC028_RS10455 2fe8846c10bd718e8e9ac21c2ced83b2 417 Gene3D G3DSA:3.40.640.10 37 285 1.9E-108 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS12135 573fed6ce07a525ec1bbfa84c565c978 244 Gene3D G3DSA:3.30.420.10 1 175 2.0E-58 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS12135 573fed6ce07a525ec1bbfa84c565c978 244 SUPERFAMILY SSF53098 1 176 1.36E-49 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS12135 573fed6ce07a525ec1bbfa84c565c978 244 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 234 2.8E-92 T 05-07-2017 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS12135 573fed6ce07a525ec1bbfa84c565c978 244 Pfam PF00929 Exonuclease 4 166 1.9E-31 T 05-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III AC028_RS12135 573fed6ce07a525ec1bbfa84c565c978 244 SMART SM00479 2 175 3.7E-42 T 05-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III AC028_RS12135 573fed6ce07a525ec1bbfa84c565c978 244 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 5 186 4.8E-56 T 05-07-2017 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS19305 50566c9f93fd4573e961760482932df2 118 Gene3D G3DSA:3.30.1360.20 18 113 4.5E-30 T 05-07-2017 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AC028_RS19305 50566c9f93fd4573e961760482932df2 118 SUPERFAMILY SSF55248 21 113 1.7E-31 T 05-07-2017 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AC028_RS19305 50566c9f93fd4573e961760482932df2 118 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 21 110 1.6E-27 T 05-07-2017 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AC028_RS19305 50566c9f93fd4573e961760482932df2 118 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 19 112 23.994 T 05-07-2017 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AC028_RS15370 d25488e9c982e3c805d59f3fa64f5b6c 148 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 148 8.1E-41 T 05-07-2017 IPR005265 Uncharacterised protein family UPF0093 AC028_RS15370 d25488e9c982e3c805d59f3fa64f5b6c 148 PIRSF PIRSF004638 1 148 6.6E-41 T 05-07-2017 IPR005265 Uncharacterised protein family UPF0093 AC028_RS01075 be8faa0bb2713b59338c1361611450e4 474 SUPERFAMILY SSF56327 171 453 1.81E-55 T 05-07-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AC028_RS01075 be8faa0bb2713b59338c1361611450e4 474 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 438 1.3E-39 T 05-07-2017 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AC028_RS01075 be8faa0bb2713b59338c1361611450e4 474 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 8.1E-33 T 05-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AC028_RS01075 be8faa0bb2713b59338c1361611450e4 474 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 8.1E-33 T 05-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AC028_RS01075 be8faa0bb2713b59338c1361611450e4 474 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 8.1E-33 T 05-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AC028_RS01075 be8faa0bb2713b59338c1361611450e4 474 PRINTS PR00732 Glycosyl hydrolase family 4 signature 9 24 8.1E-33 T 05-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AC028_RS01075 be8faa0bb2713b59338c1361611450e4 474 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 8.1E-33 T 05-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AC028_RS01075 be8faa0bb2713b59338c1361611450e4 474 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 8.1E-33 T 05-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AC028_RS01075 be8faa0bb2713b59338c1361611450e4 474 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 8.1E-33 T 05-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AC028_RS01075 be8faa0bb2713b59338c1361611450e4 474 Gene3D G3DSA:3.40.50.720 8 170 1.4E-50 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS01075 be8faa0bb2713b59338c1361611450e4 474 SUPERFAMILY SSF51735 7 170 3.39E-43 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS01075 be8faa0bb2713b59338c1361611450e4 474 Pfam PF02056 Family 4 glycosyl hydrolase 9 187 2.3E-39 T 05-07-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AC028_RS01075 be8faa0bb2713b59338c1361611450e4 474 Gene3D G3DSA:3.90.110.10 331 457 1.7E-74 T 05-07-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AC028_RS01075 be8faa0bb2713b59338c1361611450e4 474 Gene3D G3DSA:3.90.110.10 171 294 1.7E-74 T 05-07-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AC028_RS20085 816602f64997c232ae03681e83544923 801 PIRSF PIRSF007663 109 800 3.2E-174 T 05-07-2017 IPR016518 Alpha-L-fucosidase GO:0004560 KEGG: 00511+3.2.1.51 AC028_RS20085 816602f64997c232ae03681e83544923 801 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 118 267 1.4E-24 T 05-07-2017 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 AC028_RS20085 816602f64997c232ae03681e83544923 801 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 60 113 2.6E-11 T 05-07-2017 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 AC028_RS20085 816602f64997c232ae03681e83544923 801 Gene3D G3DSA:2.70.98.50 59 410 2.1E-89 T 05-07-2017 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 AC028_RS20085 816602f64997c232ae03681e83544923 801 SUPERFAMILY SSF48208 275 783 5.36E-58 T 05-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AC028_RS08975 1d4ef0ebef85eb415ff337b1cc615d48 509 Gene3D G3DSA:3.40.605.10 21 273 2.6E-93 T 05-07-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AC028_RS08975 1d4ef0ebef85eb415ff337b1cc615d48 509 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 05-07-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AC028_RS08975 1d4ef0ebef85eb415ff337b1cc615d48 509 Gene3D G3DSA:3.40.309.10 274 472 5.4E-61 T 05-07-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AC028_RS08975 1d4ef0ebef85eb415ff337b1cc615d48 509 SUPERFAMILY SSF53720 17 502 5.63E-164 T 05-07-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AC028_RS08975 1d4ef0ebef85eb415ff337b1cc615d48 509 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 297 308 - T 05-07-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AC028_RS08975 1d4ef0ebef85eb415ff337b1cc615d48 509 Pfam PF00171 Aldehyde dehydrogenase family 30 496 1.9E-167 T 05-07-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AC028_RS21195 095143dfada8bf8bcce52c416a9d9798 384 SUPERFAMILY SSF53448 45 276 1.24E-13 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS21195 095143dfada8bf8bcce52c416a9d9798 384 Pfam PF13506 Glycosyl transferase family 21 103 272 4.1E-35 T 05-07-2017 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|Reactome: R-HSA-1660662 AC028_RS09220 93a451362a081a1f625299f9c2e01f5a 52 PIRSF PIRSF037205 1 52 3.5E-26 T 05-07-2017 IPR017136 Uncharacterised conserved protein UCP037205 AC028_RS09220 93a451362a081a1f625299f9c2e01f5a 52 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 5 43 1.2E-22 T 05-07-2017 IPR017136 Uncharacterised conserved protein UCP037205 AC028_RS01015 d4a42fe3cecc7d5309b5da785720fe4e 472 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 31 465 6.4E-166 T 05-07-2017 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AC028_RS01015 d4a42fe3cecc7d5309b5da785720fe4e 472 PIRSF PIRSF000521 37 438 4.1E-28 T 05-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AC028_RS01015 d4a42fe3cecc7d5309b5da785720fe4e 472 Pfam PF00202 Aminotransferase class-III 45 465 3.4E-117 T 05-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AC028_RS01015 d4a42fe3cecc7d5309b5da785720fe4e 472 Gene3D G3DSA:3.40.640.10 83 362 2.9E-93 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS01015 d4a42fe3cecc7d5309b5da785720fe4e 472 SUPERFAMILY SSF53383 26 466 9.62E-125 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS01015 d4a42fe3cecc7d5309b5da785720fe4e 472 Gene3D G3DSA:3.90.1150.10 21 82 4.9E-51 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS01015 d4a42fe3cecc7d5309b5da785720fe4e 472 Gene3D G3DSA:3.90.1150.10 365 468 4.9E-51 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS01015 d4a42fe3cecc7d5309b5da785720fe4e 472 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 274 311 - T 05-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AC028_RS09275 d0fd891ab245910eda8fe9afcfa17272 305 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 36 305 3.5E-9 T 05-07-2017 IPR010239 Conserved hypothetical protein CHP02001 AC028_RS02595 1b8de07a76946fa4ce82778f09d80694 809 Pfam PF07793 Protein of unknown function (DUF1631) 22 795 4.6E-198 T 05-07-2017 IPR012434 Protein of unknown function DUF1631 AC028_RS01050 81b3651eea226ee8c66309f778903f3a 754 Gene3D G3DSA:2.60.40.320 80 203 8.9E-16 T 05-07-2017 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 AC028_RS01050 81b3651eea226ee8c66309f778903f3a 754 SUPERFAMILY SSF49785 1 93 8.67E-18 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS01050 81b3651eea226ee8c66309f778903f3a 754 SUPERFAMILY SSF51445 202 558 1.78E-108 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS01050 81b3651eea226ee8c66309f778903f3a 754 SUPERFAMILY SSF49303 95 203 8.35E-18 T 05-07-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AC028_RS01050 81b3651eea226ee8c66309f778903f3a 754 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 219 361 8.3E-5 T 05-07-2017 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS01050 81b3651eea226ee8c66309f778903f3a 754 SUPERFAMILY SSF49303 567 659 1.58E-12 T 05-07-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AC028_RS01050 81b3651eea226ee8c66309f778903f3a 754 Pfam PF00703 Glycosyl hydrolases family 2 95 204 2.2E-8 T 05-07-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AC028_RS01050 81b3651eea226ee8c66309f778903f3a 754 Gene3D G3DSA:2.60.120.260 64 79 2.1E-8 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS01050 81b3651eea226ee8c66309f778903f3a 754 Gene3D G3DSA:2.60.120.260 1 27 2.1E-8 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS01050 81b3651eea226ee8c66309f778903f3a 754 SUPERFAMILY SSF49303 661 739 2.88E-17 T 05-07-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AC028_RS01050 81b3651eea226ee8c66309f778903f3a 754 Gene3D G3DSA:3.20.20.80 204 454 1.6E-69 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS01050 81b3651eea226ee8c66309f778903f3a 754 Gene3D G3DSA:3.20.20.80 494 561 1.6E-69 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS06805 23b5c238a1b70ddf8fb445c79d1863f2 1134 SUPERFAMILY SSF52540 9 332 6.37E-68 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06805 23b5c238a1b70ddf8fb445c79d1863f2 1134 Gene3D G3DSA:1.10.10.160 95 175 9.5E-15 T 05-07-2017 IPR013986 DExx box DNA helicase domain AC028_RS06805 23b5c238a1b70ddf8fb445c79d1863f2 1134 SUPERFAMILY SSF52980 803 1105 1.93E-52 T 05-07-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AC028_RS06805 23b5c238a1b70ddf8fb445c79d1863f2 1134 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 9 787 2.6E-211 T 05-07-2017 AC028_RS06805 23b5c238a1b70ddf8fb445c79d1863f2 1134 Gene3D G3DSA:1.10.540.10 577 620 4.8E-4 T 05-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AC028_RS06805 23b5c238a1b70ddf8fb445c79d1863f2 1134 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 9 1068 0.0 T 05-07-2017 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AC028_RS06805 23b5c238a1b70ddf8fb445c79d1863f2 1134 PIRSF PIRSF000980 8 1114 0.0 T 05-07-2017 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AC028_RS06805 23b5c238a1b70ddf8fb445c79d1863f2 1134 SUPERFAMILY SSF52540 345 791 2.12E-74 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS06805 23b5c238a1b70ddf8fb445c79d1863f2 1134 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 8 1112 16.887 T 05-07-2017 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AC028_RS14645 685a1a87af440ae9ba28c2edbed81624 102 Pfam PF11607 Protein of unknown function (DUF3247) 1 92 2.0E-40 T 05-07-2017 IPR021649 Protein of unknown function DUF3247 AC028_RS06220 5723313dc7922954e320da9023d92433 504 Gene3D G3DSA:3.50.50.60 5 260 2.4E-34 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS06220 5723313dc7922954e320da9023d92433 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 349 361 1.7E-29 T 05-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AC028_RS06220 5723313dc7922954e320da9023d92433 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 5 17 1.7E-29 T 05-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AC028_RS06220 5723313dc7922954e320da9023d92433 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 34 46 1.7E-29 T 05-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AC028_RS06220 5723313dc7922954e320da9023d92433 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 79 91 1.7E-29 T 05-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AC028_RS06220 5723313dc7922954e320da9023d92433 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 317 323 1.7E-29 T 05-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AC028_RS06220 5723313dc7922954e320da9023d92433 504 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 18 28 1.7E-29 T 05-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AC028_RS06220 5723313dc7922954e320da9023d92433 504 SUPERFAMILY SSF54373 230 323 7.06E-6 T 05-07-2017 AC028_RS06220 5723313dc7922954e320da9023d92433 504 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 354 364 - T 05-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AC028_RS06220 5723313dc7922954e320da9023d92433 504 Pfam PF01266 FAD dependent oxidoreductase 6 340 1.5E-44 T 05-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AC028_RS06220 5723313dc7922954e320da9023d92433 504 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 388 485 3.3E-11 T 05-07-2017 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AC028_RS06220 5723313dc7922954e320da9023d92433 504 SUPERFAMILY SSF51905 316 377 2.04E-32 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS06220 5723313dc7922954e320da9023d92433 504 SUPERFAMILY SSF51905 1 264 2.04E-32 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS06220 5723313dc7922954e320da9023d92433 504 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 10 27 - T 05-07-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 AC028_RS16380 1692f4ae99dfc47ab951129e9aa1279d 281 Pfam PF13557 Putative MetA-pathway of phenol degradation 63 280 1.7E-12 T 05-07-2017 IPR025737 MetA-pathway of phenol degradation, putative AC028_RS14960 5b86de20d256297a020818a6b5864e8e 171 Pfam PF07977 FabA-like domain 28 158 9.5E-51 T 05-07-2017 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AC028_RS14960 5b86de20d256297a020818a6b5864e8e 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 3 171 1.5E-93 T 05-07-2017 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AC028_RS14960 5b86de20d256297a020818a6b5864e8e 171 Gene3D G3DSA:3.10.129.10 3 167 1.6E-55 T 05-07-2017 IPR029069 HotDog domain AC028_RS14960 5b86de20d256297a020818a6b5864e8e 171 SUPERFAMILY SSF54637 2 169 1.86E-54 T 05-07-2017 IPR029069 HotDog domain AC028_RS14960 5b86de20d256297a020818a6b5864e8e 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 171 49.869 T 05-07-2017 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AC028_RS16085 c368d60c9c65e3fa4ee99392f4ab0663 449 Pfam PF07690 Major Facilitator Superfamily 31 385 7.7E-24 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS16085 c368d60c9c65e3fa4ee99392f4ab0663 449 Gene3D G3DSA:1.20.1250.20 249 432 2.0E-19 T 05-07-2017 AC028_RS16085 c368d60c9c65e3fa4ee99392f4ab0663 449 Gene3D G3DSA:1.20.1250.20 26 230 2.3E-25 T 05-07-2017 AC028_RS16085 c368d60c9c65e3fa4ee99392f4ab0663 449 ProSitePatterns PS00217 Sugar transport proteins signature 2. 135 160 - T 05-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AC028_RS16085 c368d60c9c65e3fa4ee99392f4ab0663 449 SUPERFAMILY SSF103473 26 432 7.46E-63 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS16085 c368d60c9c65e3fa4ee99392f4ab0663 449 ProSitePatterns PS00216 Sugar transport proteins signature 1. 303 320 - T 05-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AC028_RS04325 927df2a106642d44cbcc997e33cf577f 150 Pfam PF03259 Roadblock/LC7 domain 36 108 2.6E-5 T 05-07-2017 IPR004942 Roadblock/LAMTOR2 domain AC028_RS04325 927df2a106642d44cbcc997e33cf577f 150 SUPERFAMILY SSF103196 28 146 7.5E-10 T 05-07-2017 AC028_RS04325 927df2a106642d44cbcc997e33cf577f 150 Gene3D G3DSA:3.30.450.30 26 146 8.9E-8 T 05-07-2017 AC028_RS04325 927df2a106642d44cbcc997e33cf577f 150 SMART SM00960 30 119 2.2E-6 T 05-07-2017 IPR004942 Roadblock/LAMTOR2 domain AC028_RS20175 0e1e22d2bf726597c388b0b0d09cfc9d 449 Pfam PF01979 Amidohydrolase family 51 430 7.8E-19 T 05-07-2017 IPR006680 Amidohydrolase-related GO:0016787 AC028_RS20175 0e1e22d2bf726597c388b0b0d09cfc9d 449 Gene3D G3DSA:2.30.40.10 3 69 5.5E-25 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS20175 0e1e22d2bf726597c388b0b0d09cfc9d 449 Gene3D G3DSA:3.20.20.140 70 416 1.9E-104 T 05-07-2017 AC028_RS20175 0e1e22d2bf726597c388b0b0d09cfc9d 449 SUPERFAMILY SSF51338 1 54 1.92E-31 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS20175 0e1e22d2bf726597c388b0b0d09cfc9d 449 SUPERFAMILY SSF51338 377 440 1.92E-31 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS20175 0e1e22d2bf726597c388b0b0d09cfc9d 449 ProSitePatterns PS00483 Dihydroorotase signature 2. 313 324 - T 05-07-2017 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 AC028_RS20175 0e1e22d2bf726597c388b0b0d09cfc9d 449 SUPERFAMILY SSF51556 55 377 3.71E-90 T 05-07-2017 IPR032466 Metal-dependent hydrolase AC028_RS19000 da09e749f38a76ae9a05ce4bb8fbc193 403 SUPERFAMILY SSF51905 30 252 4.47E-35 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19000 da09e749f38a76ae9a05ce4bb8fbc193 403 SUPERFAMILY SSF51905 345 388 4.47E-35 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19000 da09e749f38a76ae9a05ce4bb8fbc193 403 Gene3D G3DSA:3.50.50.60 18 108 1.1E-37 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19000 da09e749f38a76ae9a05ce4bb8fbc193 403 Gene3D G3DSA:3.50.50.60 170 251 1.1E-37 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19000 da09e749f38a76ae9a05ce4bb8fbc193 403 Gene3D G3DSA:3.50.50.60 345 392 1.1E-37 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19000 da09e749f38a76ae9a05ce4bb8fbc193 403 Pfam PF01266 FAD dependent oxidoreductase 31 380 7.4E-48 T 05-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AC028_RS01135 a719f4c7053359aebc15a3a6f4a7502f 354 Pfam PF01112 Asparaginase 59 337 7.5E-80 T 05-07-2017 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 AC028_RS01135 a719f4c7053359aebc15a3a6f4a7502f 354 SUPERFAMILY SSF56235 48 338 1.85E-85 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS09210 6b9a656767da5b102552948d0f0b6d81 490 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 215 453 4.7E-65 T 05-07-2017 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AC028_RS09210 6b9a656767da5b102552948d0f0b6d81 490 SUPERFAMILY SSF51735 7 279 2.56E-89 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS09210 6b9a656767da5b102552948d0f0b6d81 490 SUPERFAMILY SSF48179 282 480 6.46E-52 T 05-07-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AC028_RS09210 6b9a656767da5b102552948d0f0b6d81 490 Gene3D G3DSA:1.10.1040.10 281 476 9.3E-60 T 05-07-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AC028_RS09210 6b9a656767da5b102552948d0f0b6d81 490 PRINTS PR00084 Mannitol dehydrogenase signature 247 262 2.4E-15 T 05-07-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AC028_RS09210 6b9a656767da5b102552948d0f0b6d81 490 PRINTS PR00084 Mannitol dehydrogenase signature 178 191 2.4E-15 T 05-07-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AC028_RS09210 6b9a656767da5b102552948d0f0b6d81 490 PRINTS PR00084 Mannitol dehydrogenase signature 217 230 2.4E-15 T 05-07-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AC028_RS09210 6b9a656767da5b102552948d0f0b6d81 490 PRINTS PR00084 Mannitol dehydrogenase signature 32 42 2.4E-15 T 05-07-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AC028_RS09210 6b9a656767da5b102552948d0f0b6d81 490 Gene3D G3DSA:3.40.50.720 9 279 1.8E-101 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS09210 6b9a656767da5b102552948d0f0b6d81 490 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 31 187 1.0E-36 T 05-07-2017 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AC028_RS13610 111f4321a87960d58f3fd7e8f4228db7 198 Gene3D G3DSA:2.60.370.10 64 180 6.4E-47 T 05-07-2017 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13610 111f4321a87960d58f3fd7e8f4228db7 198 SUPERFAMILY SSF110111 64 179 6.28E-45 T 05-07-2017 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13610 111f4321a87960d58f3fd7e8f4228db7 198 PIRSF PIRSF005413 2 192 5.9E-60 T 05-07-2017 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 AC028_RS13610 111f4321a87960d58f3fd7e8f4228db7 198 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 31 177 1.1E-45 T 05-07-2017 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 AC028_RS06600 3db6e748f85a08218fca6510f4e2a83e 233 Pfam PF13835 Domain of unknown function (DUF4194) 56 214 1.3E-45 T 05-07-2017 IPR025449 Protein of unknown function DUF4194 AC028_RS12970 a2bc67343df33443f7fc45d80fb90f85 135 Pfam PF13279 Thioesterase-like superfamily 15 132 1.2E-21 T 05-07-2017 AC028_RS12970 a2bc67343df33443f7fc45d80fb90f85 135 Gene3D G3DSA:3.10.129.10 10 133 4.0E-39 T 05-07-2017 IPR029069 HotDog domain AC028_RS12970 a2bc67343df33443f7fc45d80fb90f85 135 SUPERFAMILY SSF54637 10 133 1.34E-35 T 05-07-2017 IPR029069 HotDog domain AC028_RS10800 a59751ad1a5b8cf34a449e86a6010260 345 Pfam PF13387 Domain of unknown function (DUF4105) 128 275 8.3E-45 T 05-07-2017 IPR025178 Domain of unknown function DUF4105 AC028_RS07075 6dd444b850c134138bbe71b2af72eaeb 255 Gene3D G3DSA:3.20.20.70 2 250 5.9E-86 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS07075 6dd444b850c134138bbe71b2af72eaeb 255 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 5 248 8.5E-64 T 05-07-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AC028_RS07075 6dd444b850c134138bbe71b2af72eaeb 255 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 253 85.876 T 05-07-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AC028_RS07075 6dd444b850c134138bbe71b2af72eaeb 255 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 4 247 7.6E-84 T 05-07-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AC028_RS07075 6dd444b850c134138bbe71b2af72eaeb 255 SUPERFAMILY SSF63892 2 250 2.62E-77 T 05-07-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AC028_RS20285 53bd99042d3d6de53a1765c9e8221667 306 Gene3D G3DSA:3.40.190.10 122 164 2.2E-6 T 05-07-2017 AC028_RS20285 53bd99042d3d6de53a1765c9e8221667 306 SUPERFAMILY SSF53850 31 286 1.19E-19 T 05-07-2017 AC028_RS20285 53bd99042d3d6de53a1765c9e8221667 306 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 38 285 5.6E-45 T 05-07-2017 AC028_RS11340 4e75a8426e9f7ef539330cb57ee17137 328 SMART SM00279 187 222 3.4E-10 T 05-07-2017 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AC028_RS11340 4e75a8426e9f7ef539330cb57ee17137 328 Gene3D G3DSA:1.10.150.20 200 266 1.8E-22 T 05-07-2017 AC028_RS11340 4e75a8426e9f7ef539330cb57ee17137 328 SUPERFAMILY SSF47807 185 304 7.03E-24 T 05-07-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AC028_RS11340 4e75a8426e9f7ef539330cb57ee17137 328 SMART SM00475 16 282 1.9E-75 T 05-07-2017 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AC028_RS11340 4e75a8426e9f7ef539330cb57ee17137 328 SUPERFAMILY SSF88723 20 174 1.86E-41 T 05-07-2017 IPR029060 PIN domain-like AC028_RS11340 4e75a8426e9f7ef539330cb57ee17137 328 Gene3D G3DSA:3.40.50.1010 20 199 6.0E-51 T 05-07-2017 IPR029060 PIN domain-like AC028_RS11340 4e75a8426e9f7ef539330cb57ee17137 328 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 185 280 2.1E-23 T 05-07-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AC028_RS11340 4e75a8426e9f7ef539330cb57ee17137 328 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 21 182 3.5E-39 T 05-07-2017 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AC028_RS04295 386ea8f18abc89f1081641d599b2793f 314 Gene3D G3DSA:3.60.15.10 21 250 4.0E-40 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS04295 386ea8f18abc89f1081641d599b2793f 314 SUPERFAMILY SSF56281 8 268 1.83E-50 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS04295 386ea8f18abc89f1081641d599b2793f 314 Pfam PF00753 Metallo-beta-lactamase superfamily 24 196 2.0E-24 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS04295 386ea8f18abc89f1081641d599b2793f 314 SMART SM00849 21 226 1.7E-28 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS05540 1dffaa52723a07fe1314b723b855fd32 515 SUPERFAMILY SSF48452 161 279 2.34E-10 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS05540 1dffaa52723a07fe1314b723b855fd32 515 SMART SM00028 145 181 180.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS05540 1dffaa52723a07fe1314b723b855fd32 515 SMART SM00028 224 257 0.056 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS05540 1dffaa52723a07fe1314b723b855fd32 515 SMART SM00862 23 98 1.1E-14 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS05540 1dffaa52723a07fe1314b723b855fd32 515 SUPERFAMILY SSF46894 5 98 5.67E-20 T 05-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AC028_RS05540 1dffaa52723a07fe1314b723b855fd32 515 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 98 3.1E-16 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS05540 1dffaa52723a07fe1314b723b855fd32 515 Gene3D G3DSA:1.10.10.10 6 101 2.0E-22 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS05540 1dffaa52723a07fe1314b723b855fd32 515 Gene3D G3DSA:1.25.40.10 141 392 1.1E-18 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS08265 6b9ab72452933a641d33c9b77a6f7500 205 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 97 1.2E-11 T 05-07-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AC028_RS04245 e4b2c5d7169c5facb3068039d5e6abd7 380 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 28 373 3.4E-53 T 05-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AC028_RS04245 e4b2c5d7169c5facb3068039d5e6abd7 380 SUPERFAMILY SSF111369 40 289 2.09E-24 T 05-07-2017 AC028_RS04245 e4b2c5d7169c5facb3068039d5e6abd7 380 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 284 4.1E-19 T 05-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_RS04245 e4b2c5d7169c5facb3068039d5e6abd7 380 Gene3D G3DSA:2.40.50.100 51 83 3.1E-14 T 05-07-2017 AC028_RS04245 e4b2c5d7169c5facb3068039d5e6abd7 380 Gene3D G3DSA:2.40.50.100 172 196 3.1E-14 T 05-07-2017 AC028_RS12775 19572c2e3942663a50ecd0dc31747840 241 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 183 224 - T 05-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AC028_RS12775 19572c2e3942663a50ecd0dc31747840 241 Pfam PF08448 PAS fold 13 119 2.4E-22 T 05-07-2017 IPR013656 PAS fold-4 AC028_RS12775 19572c2e3942663a50ecd0dc31747840 241 Gene3D G3DSA:1.10.10.60 127 183 2.7E-10 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS12775 19572c2e3942663a50ecd0dc31747840 241 Gene3D G3DSA:1.10.10.60 184 229 1.9E-16 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS12775 19572c2e3942663a50ecd0dc31747840 241 SMART SM00342 146 228 4.1E-23 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS12775 19572c2e3942663a50ecd0dc31747840 241 Gene3D G3DSA:3.30.450.20 8 118 9.9E-16 T 05-07-2017 AC028_RS12775 19572c2e3942663a50ecd0dc31747840 241 SUPERFAMILY SSF46689 182 229 1.79E-12 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS12775 19572c2e3942663a50ecd0dc31747840 241 SUPERFAMILY SSF46689 129 177 2.06E-6 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS12775 19572c2e3942663a50ecd0dc31747840 241 Pfam PF12833 Helix-turn-helix domain 153 229 1.1E-22 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS12775 19572c2e3942663a50ecd0dc31747840 241 SMART SM00091 7 75 1.1E-4 T 05-07-2017 IPR000014 PAS domain AC028_RS12775 19572c2e3942663a50ecd0dc31747840 241 SUPERFAMILY SSF55785 9 118 4.36E-15 T 05-07-2017 IPR000014 PAS domain AC028_RS12775 19572c2e3942663a50ecd0dc31747840 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 197 212 4.2E-7 T 05-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AC028_RS12775 19572c2e3942663a50ecd0dc31747840 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 212 228 4.2E-7 T 05-07-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AC028_RS07610 94c06aa13617dacf5aa1e985b5a57684 380 Gene3D G3DSA:3.30.420.40 229 338 2.3E-15 T 05-07-2017 AC028_RS07610 94c06aa13617dacf5aa1e985b5a57684 380 Gene3D G3DSA:3.30.420.40 88 228 2.0E-31 T 05-07-2017 AC028_RS07610 94c06aa13617dacf5aa1e985b5a57684 380 SUPERFAMILY SSF46785 19 86 5.08E-9 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS07610 94c06aa13617dacf5aa1e985b5a57684 380 Pfam PF00480 ROK family 93 249 1.7E-16 T 05-07-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AC028_RS07610 94c06aa13617dacf5aa1e985b5a57684 380 Gene3D G3DSA:1.10.10.10 21 87 3.3E-10 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS07610 94c06aa13617dacf5aa1e985b5a57684 380 SUPERFAMILY SSF53067 90 375 3.83E-29 T 05-07-2017 AC028_RS00855 a045bf33e70a64a224c3fa7a6f905be3 79 SUPERFAMILY SSF52833 3 74 1.53E-14 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS00855 a045bf33e70a64a224c3fa7a6f905be3 79 Gene3D G3DSA:3.40.30.10 1 75 2.9E-27 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS00855 a045bf33e70a64a224c3fa7a6f905be3 79 Pfam PF05768 Glutaredoxin-like domain (DUF836) 3 72 1.0E-12 T 05-07-2017 IPR008554 Glutaredoxin-like AC028_RS15365 d452249583691ea4c790ad1374359749 200 Pfam PF13489 Methyltransferase domain 34 124 3.1E-6 T 05-07-2017 AC028_RS15365 d452249583691ea4c790ad1374359749 200 Gene3D G3DSA:3.40.50.150 3 148 1.4E-8 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS15365 d452249583691ea4c790ad1374359749 200 SUPERFAMILY SSF53335 6 183 6.98E-15 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS02820 42a27ae830b97aa10576b4322084e512 297 SUPERFAMILY SSF46689 225 275 1.21E-10 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS02820 42a27ae830b97aa10576b4322084e512 297 Gene3D G3DSA:1.10.10.60 227 276 5.2E-16 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS02820 42a27ae830b97aa10576b4322084e512 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 226 268 - T 05-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AC028_RS02820 42a27ae830b97aa10576b4322084e512 297 Gene3D G3DSA:1.10.10.60 174 226 2.0E-7 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS02820 42a27ae830b97aa10576b4322084e512 297 Pfam PF12833 Helix-turn-helix domain 195 273 9.8E-18 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS02820 42a27ae830b97aa10576b4322084e512 297 SMART SM00342 189 272 4.3E-16 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS13900 f018cbfcdb185d1d82f7dd2339df8fb5 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 1.4E-6 T 05-07-2017 AC028_RS13900 f018cbfcdb185d1d82f7dd2339df8fb5 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 300 307 1.4E-6 T 05-07-2017 AC028_RS13900 f018cbfcdb185d1d82f7dd2339df8fb5 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 164 189 1.4E-6 T 05-07-2017 AC028_RS13900 f018cbfcdb185d1d82f7dd2339df8fb5 430 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 327 2.8E-56 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS13900 f018cbfcdb185d1d82f7dd2339df8fb5 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 164 182 7.3E-8 T 05-07-2017 AC028_RS13900 f018cbfcdb185d1d82f7dd2339df8fb5 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 7.3E-8 T 05-07-2017 AC028_RS13900 f018cbfcdb185d1d82f7dd2339df8fb5 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 7.3E-8 T 05-07-2017 AC028_RS13900 f018cbfcdb185d1d82f7dd2339df8fb5 430 SUPERFAMILY SSF51905 11 337 5.76E-34 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS13900 f018cbfcdb185d1d82f7dd2339df8fb5 430 Gene3D G3DSA:3.50.50.60 164 334 1.2E-25 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS13900 f018cbfcdb185d1d82f7dd2339df8fb5 430 Gene3D G3DSA:3.50.50.60 11 127 1.7E-23 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19160 482425a213d658212e26177cda1165d5 227 Pfam PF00005 ABC transporter 22 169 5.0E-30 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS19160 482425a213d658212e26177cda1165d5 227 SMART SM00382 30 218 1.6E-14 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS19160 482425a213d658212e26177cda1165d5 227 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 1 220 9.0E-103 T 05-07-2017 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 AC028_RS19160 482425a213d658212e26177cda1165d5 227 SUPERFAMILY SSF52540 1 223 1.82E-65 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19160 482425a213d658212e26177cda1165d5 227 Gene3D G3DSA:3.40.50.300 2 223 6.9E-63 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS13460 e4a84f9451e3d2256af2cb6e5979d53a 424 Gene3D G3DSA:3.40.50.1950 9 184 2.8E-62 T 05-07-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AC028_RS13460 e4a84f9451e3d2256af2cb6e5979d53a 424 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 212 392 7.4E-68 T 05-07-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AC028_RS13460 e4a84f9451e3d2256af2cb6e5979d53a 424 SUPERFAMILY SSF52507 10 183 1.57E-58 T 05-07-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AC028_RS13460 e4a84f9451e3d2256af2cb6e5979d53a 424 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 11 418 1.1E-130 T 05-07-2017 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5 AC028_RS13460 e4a84f9451e3d2256af2cb6e5979d53a 424 Pfam PF02441 Flavoprotein 14 141 4.6E-33 T 05-07-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AC028_RS13460 e4a84f9451e3d2256af2cb6e5979d53a 424 Gene3D G3DSA:3.40.50.10300 210 423 1.4E-80 T 05-07-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AC028_RS13460 e4a84f9451e3d2256af2cb6e5979d53a 424 SUPERFAMILY SSF102645 211 423 3.66E-72 T 05-07-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AC028_RS04605 1152d72ad0253cf4f75dc421a80b7a40 331 SUPERFAMILY SSF52540 6 238 1.23E-61 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS04605 1152d72ad0253cf4f75dc421a80b7a40 331 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS04605 1152d72ad0253cf4f75dc421a80b7a40 331 SMART SM00382 36 218 5.0E-10 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS04605 1152d72ad0253cf4f75dc421a80b7a40 331 Gene3D G3DSA:3.40.50.300 6 232 2.6E-64 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS04605 1152d72ad0253cf4f75dc421a80b7a40 331 Pfam PF00005 ABC transporter 27 171 2.5E-27 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS19855 77a94fb1b05ddd5af0f37d42e88bca0e 284 SUPERFAMILY SSF50969 53 282 1.53E-20 T 05-07-2017 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AC028_RS19855 77a94fb1b05ddd5af0f37d42e88bca0e 284 Gene3D G3DSA:2.130.10.10 91 278 6.1E-12 T 05-07-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AC028_RS19855 77a94fb1b05ddd5af0f37d42e88bca0e 284 Pfam PF05096 Glutamine cyclotransferase 51 282 3.6E-92 T 05-07-2017 IPR007788 Glutamine cyclotransferase AC028_RS07270 0e684b28faf141026e05ca68b01bb6c5 213 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 4 203 3.1E-63 T 05-07-2017 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 AC028_RS07270 0e684b28faf141026e05ca68b01bb6c5 213 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 4 203 7.6E-57 T 05-07-2017 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 AC028_RS07270 0e684b28faf141026e05ca68b01bb6c5 213 Hamap MF_00650 Phosphoribosyl-dephospho-CoA transferase [mdcG]. 1 209 33.785 T 05-07-2017 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 AC028_RS16810 c5dadbc5e39e171f4df27c44e0dc67ae 243 SMART SM00771 95 225 1.5E-55 T 05-07-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 AC028_RS16810 c5dadbc5e39e171f4df27c44e0dc67ae 243 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 37 225 8.4E-69 T 05-07-2017 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 AC028_RS16810 c5dadbc5e39e171f4df27c44e0dc67ae 243 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 98 226 9.0E-70 T 05-07-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 AC028_RS16810 c5dadbc5e39e171f4df27c44e0dc67ae 243 Hamap MF_00509 Cell division protein ZipA [zipA]. 5 227 17.716 T 05-07-2017 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 AC028_RS16810 c5dadbc5e39e171f4df27c44e0dc67ae 243 Gene3D G3DSA:3.30.1400.10 94 232 4.1E-44 T 05-07-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 AC028_RS16810 c5dadbc5e39e171f4df27c44e0dc67ae 243 SUPERFAMILY SSF64383 94 232 1.03E-36 T 05-07-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 AC028_RS16810 c5dadbc5e39e171f4df27c44e0dc67ae 243 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 98 223 1.2E-37 T 05-07-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 AC028_RS20325 678963c3bb7aa44ccd2bedbf2609a2f5 458 SMART SM00487 21 219 1.4E-55 T 05-07-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain AC028_RS20325 678963c3bb7aa44ccd2bedbf2609a2f5 458 Pfam PF00270 DEAD/DEAH box helicase 26 191 6.7E-45 T 05-07-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AC028_RS20325 678963c3bb7aa44ccd2bedbf2609a2f5 458 SMART SM00490 255 336 3.3E-29 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS20325 678963c3bb7aa44ccd2bedbf2609a2f5 458 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 05-07-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AC028_RS20325 678963c3bb7aa44ccd2bedbf2609a2f5 458 Gene3D G3DSA:3.40.50.300 1 208 3.6E-73 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS20325 678963c3bb7aa44ccd2bedbf2609a2f5 458 SUPERFAMILY SSF52540 71 351 3.63E-69 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS20325 678963c3bb7aa44ccd2bedbf2609a2f5 458 SMART SM00382 38 209 0.0046 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS20325 678963c3bb7aa44ccd2bedbf2609a2f5 458 Pfam PF03880 DbpA RNA binding domain 386 456 7.4E-23 T 05-07-2017 IPR005580 DbpA, RNA-binding domain AC028_RS20325 678963c3bb7aa44ccd2bedbf2609a2f5 458 Pfam PF00271 Helicase conserved C-terminal domain 237 336 2.6E-27 T 05-07-2017 IPR001650 Helicase, C-terminal AC028_RS20325 678963c3bb7aa44ccd2bedbf2609a2f5 458 Gene3D G3DSA:3.40.50.300 214 365 3.5E-45 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19145 bb2de92d04359e099f6b67d99dfc91d2 82 SUPERFAMILY SSF109910 3 79 3.92E-23 T 05-07-2017 IPR005631 Flavinator of succinate dehydrogenase AC028_RS19145 bb2de92d04359e099f6b67d99dfc91d2 82 Gene3D G3DSA:1.10.150.250 2 79 4.1E-27 T 05-07-2017 IPR005631 Flavinator of succinate dehydrogenase AC028_RS19145 bb2de92d04359e099f6b67d99dfc91d2 82 Pfam PF03937 Flavinator of succinate dehydrogenase 8 77 7.3E-24 T 05-07-2017 IPR005631 Flavinator of succinate dehydrogenase AC028_RS13505 1be6ccb13232a225c306e0172c6ed3bd 309 SMART SM00470 46 136 1.4E-36 T 05-07-2017 IPR003115 ParB/Sulfiredoxin AC028_RS13505 1be6ccb13232a225c306e0172c6ed3bd 309 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 45 219 7.4E-57 T 05-07-2017 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AC028_RS13505 1be6ccb13232a225c306e0172c6ed3bd 309 SUPERFAMILY SSF110849 45 180 3.5E-33 T 05-07-2017 IPR003115 ParB/Sulfiredoxin AC028_RS13505 1be6ccb13232a225c306e0172c6ed3bd 309 Gene3D G3DSA:3.90.1530.10 40 142 7.6E-40 T 05-07-2017 AC028_RS13505 1be6ccb13232a225c306e0172c6ed3bd 309 Pfam PF02195 ParB-like nuclease domain 47 136 1.3E-27 T 05-07-2017 IPR003115 ParB/Sulfiredoxin AC028_RS06135 7cca2431905b819c94198293d6cf1eb8 110 Pfam PF13333 Integrase core domain 51 103 1.0E-9 T 05-07-2017 IPR001584 Integrase, catalytic core GO:0015074 AC028_RS04760 9958ccdf34013b9be1161df302abb77d 788 Gene3D G3DSA:1.20.1640.10 631 770 7.6E-10 T 05-07-2017 AC028_RS04760 9958ccdf34013b9be1161df302abb77d 788 Gene3D G3DSA:1.20.1640.10 213 393 3.2E-16 T 05-07-2017 AC028_RS04760 9958ccdf34013b9be1161df302abb77d 788 Pfam PF03176 MMPL family 191 413 6.7E-6 T 05-07-2017 IPR004869 Membrane transport protein, MMPL domain GO:0016020 AC028_RS04760 9958ccdf34013b9be1161df302abb77d 788 SUPERFAMILY SSF82866 214 393 1.57E-19 T 05-07-2017 AC028_RS04760 9958ccdf34013b9be1161df302abb77d 788 SUPERFAMILY SSF82866 613 770 3.53E-16 T 05-07-2017 AC028_RS07710 853c28298c482d574ab020c1c1d81edb 435 SUPERFAMILY SSF46785 103 214 6.44E-15 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS07710 853c28298c482d574ab020c1c1d81edb 435 Gene3D G3DSA:3.40.190.10 285 359 1.2E-9 T 05-07-2017 AC028_RS07710 853c28298c482d574ab020c1c1d81edb 435 Gene3D G3DSA:3.40.190.10 192 284 1.1E-24 T 05-07-2017 AC028_RS07710 853c28298c482d574ab020c1c1d81edb 435 SUPERFAMILY SSF46785 5 96 7.52E-20 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS07710 853c28298c482d574ab020c1c1d81edb 435 SUPERFAMILY SSF53850 191 402 2.17E-38 T 05-07-2017 AC028_RS07710 853c28298c482d574ab020c1c1d81edb 435 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.4E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS07710 853c28298c482d574ab020c1c1d81edb 435 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.4E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS07710 853c28298c482d574ab020c1c1d81edb 435 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.4E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS07710 853c28298c482d574ab020c1c1d81edb 435 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 107 163 8.2E-10 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS07710 853c28298c482d574ab020c1c1d81edb 435 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.3E-18 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS07710 853c28298c482d574ab020c1c1d81edb 435 Pfam PF03466 LysR substrate binding domain 190 398 7.8E-33 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS07710 853c28298c482d574ab020c1c1d81edb 435 Gene3D G3DSA:1.10.10.10 102 185 3.4E-15 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS07710 853c28298c482d574ab020c1c1d81edb 435 Gene3D G3DSA:1.10.10.10 7 81 9.0E-22 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS10150 05123e3862c0203f9daf30fcf4785d7d 171 Gene3D G3DSA:3.30.70.560 3 150 1.5E-40 T 05-07-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AC028_RS10150 05123e3862c0203f9daf30fcf4785d7d 171 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 130 9.1E-29 T 05-07-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AC028_RS10150 05123e3862c0203f9daf30fcf4785d7d 171 SUPERFAMILY SSF55083 1 151 1.09E-39 T 05-07-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AC028_RS10150 05123e3862c0203f9daf30fcf4785d7d 171 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 130 5.2E-24 T 05-07-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AC028_RS04105 691a3d6ff46dc1552bf32cc87dcd2e0c 410 SUPERFAMILY SSF103365 20 410 1.03E-129 T 05-07-2017 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AC028_RS04105 691a3d6ff46dc1552bf32cc87dcd2e0c 410 Pfam PF01139 tRNA-splicing ligase RtcB 38 410 1.6E-126 T 05-07-2017 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AC028_RS12940 7befad7db04204d5a2a8bc8989d99fc2 199 Gene3D G3DSA:1.10.238.10 67 101 3.8E-4 T 05-07-2017 IPR011992 EF-hand domain pair AC028_RS12940 7befad7db04204d5a2a8bc8989d99fc2 199 ProSitePatterns PS00018 EF-hand calcium-binding domain. 153 165 - T 05-07-2017 IPR018247 EF-Hand 1, calcium-binding site AC028_RS12940 7befad7db04204d5a2a8bc8989d99fc2 199 Pfam PF13202 EF hand 147 166 3.6E-6 T 05-07-2017 IPR002048 EF-hand domain GO:0005509 AC028_RS12940 7befad7db04204d5a2a8bc8989d99fc2 199 Pfam PF13202 EF hand 37 50 0.0022 T 05-07-2017 IPR002048 EF-hand domain GO:0005509 AC028_RS12940 7befad7db04204d5a2a8bc8989d99fc2 199 Pfam PF13202 EF hand 120 134 0.0023 T 05-07-2017 IPR002048 EF-hand domain GO:0005509 AC028_RS12940 7befad7db04204d5a2a8bc8989d99fc2 199 Gene3D G3DSA:1.10.238.10 37 66 2.5E-6 T 05-07-2017 IPR011992 EF-hand domain pair AC028_RS12940 7befad7db04204d5a2a8bc8989d99fc2 199 Gene3D G3DSA:1.10.238.10 102 172 1.0E-12 T 05-07-2017 IPR011992 EF-hand domain pair AC028_RS12940 7befad7db04204d5a2a8bc8989d99fc2 199 SUPERFAMILY SSF47473 59 167 2.13E-15 T 05-07-2017 IPR011992 EF-hand domain pair AC028_RS12940 7befad7db04204d5a2a8bc8989d99fc2 199 Pfam PF13499 EF-hand domain pair 57 110 3.4E-8 T 05-07-2017 IPR002048 EF-hand domain GO:0005509 AC028_RS15760 72ada01ce7295044e85a057186f11827 241 Pfam PF00691 OmpA family 125 220 1.5E-24 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS15760 72ada01ce7295044e85a057186f11827 241 SUPERFAMILY SSF103088 113 229 8.37E-41 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS15760 72ada01ce7295044e85a057186f11827 241 Gene3D G3DSA:3.30.1330.60 104 226 2.3E-42 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS15760 72ada01ce7295044e85a057186f11827 241 Pfam PF13488 Glycine zipper 50 95 9.8E-11 T 05-07-2017 AC028_RS15760 72ada01ce7295044e85a057186f11827 241 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 189 208 5.4E-9 T 05-07-2017 AC028_RS15760 72ada01ce7295044e85a057186f11827 241 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 209 229 5.4E-9 T 05-07-2017 AC028_RS15760 72ada01ce7295044e85a057186f11827 241 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 171 188 5.4E-9 T 05-07-2017 AC028_RS15760 72ada01ce7295044e85a057186f11827 241 PRINTS PR01021 OMPA domain signature 156 171 1.9E-17 T 05-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AC028_RS15760 72ada01ce7295044e85a057186f11827 241 PRINTS PR01021 OMPA domain signature 171 187 1.9E-17 T 05-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AC028_RS15760 72ada01ce7295044e85a057186f11827 241 PRINTS PR01021 OMPA domain signature 126 148 1.9E-17 T 05-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AC028_RS15760 72ada01ce7295044e85a057186f11827 241 ProSitePatterns PS01068 OmpA-like domain. 158 202 - T 05-07-2017 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AC028_RS13015 c44f80133202a56cb554ea68dc7ce113 172 ProSitePatterns PS00855 Signal peptidases II signature. 105 117 - T 05-07-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AC028_RS13015 c44f80133202a56cb554ea68dc7ce113 172 TIGRFAM TIGR00077 lspA: signal peptidase II 10 164 1.7E-40 T 05-07-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AC028_RS13015 c44f80133202a56cb554ea68dc7ce113 172 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 102 117 6.3E-16 T 05-07-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AC028_RS13015 c44f80133202a56cb554ea68dc7ce113 172 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 6.3E-16 T 05-07-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AC028_RS13015 c44f80133202a56cb554ea68dc7ce113 172 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 138 154 6.3E-16 T 05-07-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AC028_RS13015 c44f80133202a56cb554ea68dc7ce113 172 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 163 16.097 T 05-07-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AC028_RS13015 c44f80133202a56cb554ea68dc7ce113 172 Pfam PF01252 Signal peptidase (SPase) II 17 157 4.3E-35 T 05-07-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AC028_RS17160 c1f52415fe6e83fc95793f126ef27cba 376 SUPERFAMILY SSF53756 29 366 6.73E-43 T 05-07-2017 AC028_RS17160 c1f52415fe6e83fc95793f126ef27cba 376 Pfam PF00534 Glycosyl transferases group 1 184 344 1.5E-14 T 05-07-2017 IPR001296 Glycosyl transferase, family 1 AC028_RS17160 c1f52415fe6e83fc95793f126ef27cba 376 Gene3D G3DSA:3.40.50.2000 179 344 3.8E-17 T 05-07-2017 AC028_RS17160 c1f52415fe6e83fc95793f126ef27cba 376 Pfam PF13439 Glycosyltransferase Family 4 29 140 2.8E-7 T 05-07-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AC028_RS16785 515202015c153189b4dc3212998a73e1 143 Pfam PF01250 Ribosomal protein S6 4 92 4.5E-26 T 05-07-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS16785 515202015c153189b4dc3212998a73e1 143 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 2 95 21.161 T 05-07-2017 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AC028_RS16785 515202015c153189b4dc3212998a73e1 143 Gene3D G3DSA:3.30.70.60 2 104 7.5E-38 T 05-07-2017 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AC028_RS16785 515202015c153189b4dc3212998a73e1 143 TIGRFAM TIGR00166 S6: ribosomal protein bS6 3 94 9.7E-32 T 05-07-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS16785 515202015c153189b4dc3212998a73e1 143 SUPERFAMILY SSF54995 1 104 1.44E-34 T 05-07-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS02240 6120baf2ad7242735deacc5dc4c35fd5 168 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 138 168 8.0E-12 T 05-07-2017 AC028_RS02240 6120baf2ad7242735deacc5dc4c35fd5 168 Pfam PF04191 Phospholipid methyltransferase 57 156 5.4E-13 T 05-07-2017 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 AC028_RS02020 47a1eea0a31723189c11b7d39efa60b7 113 Pfam PF00355 Rieske [2Fe-2S] domain 26 96 2.2E-11 T 05-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AC028_RS02020 47a1eea0a31723189c11b7d39efa60b7 113 Gene3D G3DSA:2.102.10.10 5 112 3.4E-22 T 05-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AC028_RS02020 47a1eea0a31723189c11b7d39efa60b7 113 SUPERFAMILY SSF50022 7 112 1.7E-22 T 05-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AC028_RS07430 040185a8752c728889ca19b8eee90e58 1284 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 954 1282 6.1E-56 T 05-07-2017 IPR007452 Translocation and assembly module TamB AC028_RS15485 1c7d68bf135c575d547442102f42a4db 342 SMART SM00972 101 170 1.6E-12 T 05-07-2017 IPR007893 Spore coat protein U AC028_RS15485 1c7d68bf135c575d547442102f42a4db 342 SMART SM00972 281 339 4.6E-20 T 05-07-2017 IPR007893 Spore coat protein U AC028_RS15485 1c7d68bf135c575d547442102f42a4db 342 Pfam PF05229 Spore Coat Protein U domain 208 338 1.3E-33 T 05-07-2017 IPR007893 Spore coat protein U AC028_RS15485 1c7d68bf135c575d547442102f42a4db 342 Pfam PF05229 Spore Coat Protein U domain 24 166 3.3E-18 T 05-07-2017 IPR007893 Spore coat protein U AC028_RS18985 4ddb6971be15b8b58fe5236441e1144f 358 SUPERFAMILY SSF53474 55 352 3.69E-32 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS18985 4ddb6971be15b8b58fe5236441e1144f 358 Gene3D G3DSA:3.40.50.1820 50 354 4.3E-42 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS18985 4ddb6971be15b8b58fe5236441e1144f 358 TIGRFAM TIGR01836 PHA_synth_III_C: poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit 7 354 2.4E-174 T 05-07-2017 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit GO:0016746|GO:0042619 AC028_RS18985 4ddb6971be15b8b58fe5236441e1144f 358 Pfam PF00561 alpha/beta hydrolase fold 68 331 7.5E-23 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS07770 1c4897989dad1790c72af029c788734d 167 Pfam PF04965 Gene 25-like lysozyme 39 142 2.1E-21 T 05-07-2017 IPR007048 GpW/Gp25/anti-adapter protein IraD AC028_RS07770 1c4897989dad1790c72af029c788734d 167 SUPERFAMILY SSF160719 66 153 2.75E-11 T 05-07-2017 AC028_RS07770 1c4897989dad1790c72af029c788734d 167 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 11 162 5.5E-25 T 05-07-2017 IPR017737 Type VI secretion system, lysozyme-related protein AC028_RS01030 73400e85640cdedcd0602749615cc6c5 890 Gene3D G3DSA:2.40.170.20 173 326 3.6E-73 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01030 73400e85640cdedcd0602749615cc6c5 890 Gene3D G3DSA:2.40.170.20 358 532 3.6E-73 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01030 73400e85640cdedcd0602749615cc6c5 890 Gene3D G3DSA:2.40.170.20 572 890 3.6E-73 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01030 73400e85640cdedcd0602749615cc6c5 890 Gene3D G3DSA:2.170.130.10 45 172 1.1E-15 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS01030 73400e85640cdedcd0602749615cc6c5 890 SUPERFAMILY SSF56935 280 507 1.14E-97 T 05-07-2017 AC028_RS01030 73400e85640cdedcd0602749615cc6c5 890 SUPERFAMILY SSF56935 541 890 1.14E-97 T 05-07-2017 AC028_RS01030 73400e85640cdedcd0602749615cc6c5 890 SUPERFAMILY SSF56935 31 239 1.14E-97 T 05-07-2017 AC028_RS01030 73400e85640cdedcd0602749615cc6c5 890 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 173 1.2E-13 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS01030 73400e85640cdedcd0602749615cc6c5 890 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 42 890 5.6E-235 T 05-07-2017 IPR010104 Bacterial TonB-dependent receptor AC028_RS01030 73400e85640cdedcd0602749615cc6c5 890 Pfam PF00593 TonB dependent receptor 631 889 2.7E-33 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS07640 9031fb47248884a2ea754d5ebb12ae91 542 Gene3D G3DSA:3.60.21.10 175 512 8.4E-13 T 05-07-2017 IPR029052 Metallo-dependent phosphatase-like AC028_RS07640 9031fb47248884a2ea754d5ebb12ae91 542 Pfam PF09423 PhoD-like phosphatase 167 510 1.5E-104 T 05-07-2017 IPR018946 Alkaline phosphatase D-related AC028_RS07640 9031fb47248884a2ea754d5ebb12ae91 542 SUPERFAMILY SSF56300 166 334 7.34E-35 T 05-07-2017 IPR029052 Metallo-dependent phosphatase-like AC028_RS07640 9031fb47248884a2ea754d5ebb12ae91 542 SUPERFAMILY SSF56300 365 512 7.34E-35 T 05-07-2017 IPR029052 Metallo-dependent phosphatase-like AC028_RS07640 9031fb47248884a2ea754d5ebb12ae91 542 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 57 154 1.9E-27 T 05-07-2017 IPR032093 Phospholipase D, N-terminal AC028_RS14475 5a702c957c1121f99d44c3ba20715d3a 531 PIRSF PIRSF006060 1 465 3.2E-72 T 05-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AC028_RS14475 5a702c957c1121f99d44c3ba20715d3a 531 Pfam PF13520 Amino acid permease 13 423 6.9E-40 T 05-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AC028_RS15875 28ec0932ab2bccbbd5cd1550be180ee4 239 Pfam PF05598 Transposase domain (DUF772) 50 122 1.6E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS15875 28ec0932ab2bccbbd5cd1550be180ee4 239 Pfam PF01609 Transposase DDE domain 135 232 2.8E-20 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS18655 ba259ae8cba5c39780efb2c4c404387d 314 PIRSF PIRSF002867 2 311 1.3E-98 T 05-07-2017 IPR024181 Chemotaxis response regulator CheV AC028_RS18655 ba259ae8cba5c39780efb2c4c404387d 314 Gene3D G3DSA:3.40.50.2300 180 305 3.1E-23 T 05-07-2017 AC028_RS18655 ba259ae8cba5c39780efb2c4c404387d 314 SUPERFAMILY SSF52172 181 308 1.85E-22 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS18655 ba259ae8cba5c39780efb2c4c404387d 314 Pfam PF01584 CheW-like domain 23 159 2.3E-32 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS18655 ba259ae8cba5c39780efb2c4c404387d 314 Pfam PF00072 Response regulator receiver domain 184 296 8.6E-17 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS18655 ba259ae8cba5c39780efb2c4c404387d 314 SMART SM00448 182 303 1.1E-13 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS18655 ba259ae8cba5c39780efb2c4c404387d 314 Gene3D G3DSA:2.30.30.40 96 148 4.2E-4 T 05-07-2017 AC028_RS18655 ba259ae8cba5c39780efb2c4c404387d 314 SUPERFAMILY SSF50341 18 160 2.49E-32 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS18655 ba259ae8cba5c39780efb2c4c404387d 314 SMART SM00260 18 157 1.6E-22 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS09465 82602c025f6064ab8bcd95617eff4999 357 Pfam PF01312 FlhB HrpN YscU SpaS Family 3 341 1.2E-103 T 05-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AC028_RS09465 82602c025f6064ab8bcd95617eff4999 357 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 3 343 1.0E-98 T 05-07-2017 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 AC028_RS09465 82602c025f6064ab8bcd95617eff4999 357 Gene3D G3DSA:3.40.1690.10 213 347 8.2E-50 T 05-07-2017 IPR029025 Type III secretion system substrate exporter, C-terminal AC028_RS09465 82602c025f6064ab8bcd95617eff4999 357 SUPERFAMILY SSF160544 239 344 2.09E-31 T 05-07-2017 IPR029025 Type III secretion system substrate exporter, C-terminal AC028_RS09465 82602c025f6064ab8bcd95617eff4999 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 1.2E-36 T 05-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AC028_RS09465 82602c025f6064ab8bcd95617eff4999 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 203 221 1.2E-36 T 05-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AC028_RS09465 82602c025f6064ab8bcd95617eff4999 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 297 318 1.2E-36 T 05-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AC028_RS09465 82602c025f6064ab8bcd95617eff4999 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 223 240 1.2E-36 T 05-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AC028_RS09465 82602c025f6064ab8bcd95617eff4999 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 267 282 1.2E-36 T 05-07-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AC028_RS03130 f6e4b80f3ed2810881be5214f807babd 279 SUPERFAMILY SSF53448 4 252 1.61E-43 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS03130 f6e4b80f3ed2810881be5214f807babd 279 Pfam PF00535 Glycosyl transferase family 2 8 146 1.3E-19 T 05-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AC028_RS03130 f6e4b80f3ed2810881be5214f807babd 279 Gene3D G3DSA:3.90.550.10 9 246 9.4E-36 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS10375 e6853d2a9aeca9fdd4c48620646452a3 500 Pfam PF00672 HAMP domain 220 287 6.2E-12 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS10375 e6853d2a9aeca9fdd4c48620646452a3 500 Gene3D G3DSA:1.10.287.130 282 334 7.3E-11 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS10375 e6853d2a9aeca9fdd4c48620646452a3 500 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 388 494 1.7E-18 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS10375 e6853d2a9aeca9fdd4c48620646452a3 500 SUPERFAMILY SSF47384 276 347 8.24E-10 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS10375 e6853d2a9aeca9fdd4c48620646452a3 500 SUPERFAMILY SSF55874 345 495 8.26E-33 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS10375 e6853d2a9aeca9fdd4c48620646452a3 500 SMART SM00304 239 291 5.5E-5 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS10375 e6853d2a9aeca9fdd4c48620646452a3 500 Gene3D G3DSA:3.30.565.10 335 498 1.5E-32 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS10375 e6853d2a9aeca9fdd4c48620646452a3 500 SMART SM00387 388 497 1.5E-28 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS10375 e6853d2a9aeca9fdd4c48620646452a3 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 436 6.2E-9 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS10375 e6853d2a9aeca9fdd4c48620646452a3 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 475 6.2E-9 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS10375 e6853d2a9aeca9fdd4c48620646452a3 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 494 6.2E-9 T 05-07-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AC028_RS10375 e6853d2a9aeca9fdd4c48620646452a3 500 SMART SM00388 292 349 1.1E-5 T 05-07-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AC028_RS09395 2de5ef5f4d8775db25fb0a4e90339e2e 551 SMART SM00369 200 224 6.1 T 05-07-2017 IPR003591 Leucine-rich repeat, typical subtype AC028_RS09395 2de5ef5f4d8775db25fb0a4e90339e2e 551 SMART SM00369 248 271 23.0 T 05-07-2017 IPR003591 Leucine-rich repeat, typical subtype AC028_RS09395 2de5ef5f4d8775db25fb0a4e90339e2e 551 SMART SM00369 106 129 49.0 T 05-07-2017 IPR003591 Leucine-rich repeat, typical subtype AC028_RS09395 2de5ef5f4d8775db25fb0a4e90339e2e 551 SMART SM00369 59 82 31.0 T 05-07-2017 IPR003591 Leucine-rich repeat, typical subtype AC028_RS09395 2de5ef5f4d8775db25fb0a4e90339e2e 551 SUPERFAMILY SSF52058 45 272 7.82E-37 T 05-07-2017 IPR032675 Leucine-rich repeat domain, L domain-like AC028_RS09395 2de5ef5f4d8775db25fb0a4e90339e2e 551 Pfam PF13855 Leucine rich repeat 178 235 1.0E-6 T 05-07-2017 IPR001611 Leucine-rich repeat GO:0005515 AC028_RS09395 2de5ef5f4d8775db25fb0a4e90339e2e 551 Gene3D G3DSA:3.80.10.10 39 273 4.0E-36 T 05-07-2017 IPR032675 Leucine-rich repeat domain, L domain-like AC028_RS06400 7498146fb2260a624a7929db6c7eb6ea 204 Gene3D G3DSA:3.30.70.270 39 196 1.5E-49 T 05-07-2017 AC028_RS06400 7498146fb2260a624a7929db6c7eb6ea 204 SMART SM00267 26 197 1.2E-56 T 05-07-2017 IPR000160 GGDEF domain AC028_RS06400 7498146fb2260a624a7929db6c7eb6ea 204 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 33 195 3.6E-49 T 05-07-2017 IPR000160 GGDEF domain AC028_RS06400 7498146fb2260a624a7929db6c7eb6ea 204 SUPERFAMILY SSF55073 42 196 4.47E-44 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS06400 7498146fb2260a624a7929db6c7eb6ea 204 Pfam PF00990 Diguanylate cyclase, GGDEF domain 37 193 1.0E-41 T 05-07-2017 IPR000160 GGDEF domain AC028_RS15125 9a0325e6ea9c5d1752d98b2110b5b443 346 Gene3D G3DSA:3.40.50.720 2 186 3.3E-39 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS15125 9a0325e6ea9c5d1752d98b2110b5b443 346 SUPERFAMILY SSF51735 4 338 1.11E-73 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS15125 9a0325e6ea9c5d1752d98b2110b5b443 346 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 4 342 52.307 T 05-07-2017 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 AC028_RS15125 9a0325e6ea9c5d1752d98b2110b5b443 346 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 4 338 8.2E-143 T 05-07-2017 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 AC028_RS15125 9a0325e6ea9c5d1752d98b2110b5b443 346 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 332 2.5E-134 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS15125 9a0325e6ea9c5d1752d98b2110b5b443 346 Gene3D G3DSA:3.90.25.10 189 243 7.1E-46 T 05-07-2017 AC028_RS15125 9a0325e6ea9c5d1752d98b2110b5b443 346 Gene3D G3DSA:3.90.25.10 290 342 7.1E-46 T 05-07-2017 AC028_RS02635 5f1fe9e36322960e6dbd77ed52546cf3 196 Gene3D G3DSA:3.40.50.10420 5 187 2.8E-45 T 05-07-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain AC028_RS02635 5f1fe9e36322960e6dbd77ed52546cf3 196 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 184 3.3E-45 T 05-07-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase AC028_RS02635 5f1fe9e36322960e6dbd77ed52546cf3 196 SUPERFAMILY SSF100950 4 190 1.35E-47 T 05-07-2017 AC028_RS02635 5f1fe9e36322960e6dbd77ed52546cf3 196 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 184 1.8E-30 T 05-07-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase AC028_RS02635 5f1fe9e36322960e6dbd77ed52546cf3 196 PIRSF PIRSF006806 1 187 1.9E-28 T 05-07-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase AC028_RS10935 8fc3877520c18f516c4efdec9cfcdafe 207 Gene3D G3DSA:3.40.50.1110 27 205 8.7E-48 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS10935 8fc3877520c18f516c4efdec9cfcdafe 207 SUPERFAMILY SSF52266 27 205 1.68E-45 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS10935 8fc3877520c18f516c4efdec9cfcdafe 207 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 29 189 2.4E-19 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS12030 07f68bafe05c375d8c1f077944f9c50c 253 Pfam PF12811 Bax inhibitor 1 like 23 251 6.9E-79 T 05-07-2017 IPR010539 Protein of unknown function UCP009160 AC028_RS12030 07f68bafe05c375d8c1f077944f9c50c 253 PIRSF PIRSF009160 1 253 3.8E-101 T 05-07-2017 IPR010539 Protein of unknown function UCP009160 AC028_RS13815 2b0ee44f43d2f9a88c276a59208d918a 434 SUPERFAMILY SSF53187 340 432 4.86E-79 T 05-07-2017 AC028_RS13815 2b0ee44f43d2f9a88c276a59208d918a 434 SUPERFAMILY SSF53187 29 236 4.86E-79 T 05-07-2017 AC028_RS13815 2b0ee44f43d2f9a88c276a59208d918a 434 Gene3D G3DSA:3.30.70.360 220 339 3.8E-31 T 05-07-2017 IPR011650 Peptidase M20, dimerisation domain AC028_RS13815 2b0ee44f43d2f9a88c276a59208d918a 434 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 40 419 7.1E-102 T 05-07-2017 IPR017439 Amidohydrolase GO:0016787 AC028_RS13815 2b0ee44f43d2f9a88c276a59208d918a 434 PIRSF PIRSF005962 25 434 6.8E-117 T 05-07-2017 IPR017439 Amidohydrolase GO:0016787 AC028_RS13815 2b0ee44f43d2f9a88c276a59208d918a 434 Gene3D G3DSA:3.40.630.10 19 217 1.9E-98 T 05-07-2017 AC028_RS13815 2b0ee44f43d2f9a88c276a59208d918a 434 Gene3D G3DSA:3.40.630.10 340 433 1.9E-98 T 05-07-2017 AC028_RS13815 2b0ee44f43d2f9a88c276a59208d918a 434 Pfam PF07687 Peptidase dimerisation domain 225 322 2.3E-7 T 05-07-2017 IPR011650 Peptidase M20, dimerisation domain AC028_RS13815 2b0ee44f43d2f9a88c276a59208d918a 434 Pfam PF01546 Peptidase family M20/M25/M40 97 425 4.0E-33 T 05-07-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AC028_RS13815 2b0ee44f43d2f9a88c276a59208d918a 434 SUPERFAMILY SSF55031 222 328 5.76E-27 T 05-07-2017 IPR011650 Peptidase M20, dimerisation domain AC028_RS02785 86bb75bdd377450a48297928f3071839 418 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 3 398 44.498 T 05-07-2017 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 AC028_RS02785 86bb75bdd377450a48297928f3071839 418 Pfam PF00365 Phosphofructokinase 10 321 4.7E-48 T 05-07-2017 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AC028_RS02785 86bb75bdd377450a48297928f3071839 418 Gene3D G3DSA:3.40.50.450 5 236 4.7E-52 T 05-07-2017 AC028_RS02785 86bb75bdd377450a48297928f3071839 418 PIRSF PIRSF036483 2 417 5.2E-218 T 05-07-2017 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 AC028_RS02785 86bb75bdd377450a48297928f3071839 418 SUPERFAMILY SSF53784 5 416 2.09E-103 T 05-07-2017 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AC028_RS02785 86bb75bdd377450a48297928f3071839 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 256 278 1.4E-9 T 05-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AC028_RS02785 86bb75bdd377450a48297928f3071839 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 192 1.4E-9 T 05-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AC028_RS02785 86bb75bdd377450a48297928f3071839 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 8 27 1.4E-9 T 05-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AC028_RS02785 86bb75bdd377450a48297928f3071839 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 134 151 1.4E-9 T 05-07-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 AC028_RS19100 a60665b4defaab23a8418864a7f63e4b 476 SUPERFAMILY SSF55347 171 466 6.21E-97 T 05-07-2017 AC028_RS19100 a60665b4defaab23a8418864a7f63e4b 476 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 6 176 1.3E-41 T 05-07-2017 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AC028_RS19100 a60665b4defaab23a8418864a7f63e4b 476 Gene3D G3DSA:3.30.360.10 176 464 3.7E-102 T 05-07-2017 AC028_RS19100 a60665b4defaab23a8418864a7f63e4b 476 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 3 465 8.2E-137 T 05-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AC028_RS19100 a60665b4defaab23a8418864a7f63e4b 476 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 156 184 3.5E-40 T 05-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AC028_RS19100 a60665b4defaab23a8418864a7f63e4b 476 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 132 145 3.5E-40 T 05-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AC028_RS19100 a60665b4defaab23a8418864a7f63e4b 476 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 313 339 3.5E-40 T 05-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AC028_RS19100 a60665b4defaab23a8418864a7f63e4b 476 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 208 225 3.5E-40 T 05-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AC028_RS19100 a60665b4defaab23a8418864a7f63e4b 476 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 226 242 3.5E-40 T 05-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AC028_RS19100 a60665b4defaab23a8418864a7f63e4b 476 SUPERFAMILY SSF51735 3 179 4.53E-42 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS19100 a60665b4defaab23a8418864a7f63e4b 476 Gene3D G3DSA:3.40.50.720 4 175 3.6E-46 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS19100 a60665b4defaab23a8418864a7f63e4b 476 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 2 467 68.311 T 05-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AC028_RS19100 a60665b4defaab23a8418864a7f63e4b 476 PIRSF PIRSF000110 1 476 2.1E-162 T 05-07-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AC028_RS19100 a60665b4defaab23a8418864a7f63e4b 476 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 179 465 6.4E-96 T 05-07-2017 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AC028_RS21140 848ce9f5d32f699a767caf24e73aeaa6 66 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 42 61 1.7E-6 T 05-07-2017 IPR019626 Stress-induced protein, KGG, repeat AC028_RS21140 848ce9f5d32f699a767caf24e73aeaa6 66 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 15 36 2.1E-9 T 05-07-2017 IPR019626 Stress-induced protein, KGG, repeat AC028_RS04700 07417f7d8bd9c55064df4509b5fa3a68 599 Pfam PF00723 Glycosyl hydrolases family 15 224 585 1.1E-53 T 05-07-2017 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: R-HSA-70221 AC028_RS04700 07417f7d8bd9c55064df4509b5fa3a68 599 Gene3D G3DSA:1.50.10.10 216 593 7.3E-84 T 05-07-2017 IPR012341 Six-hairpin glycosidase GO:0003824 AC028_RS04700 07417f7d8bd9c55064df4509b5fa3a68 599 SUPERFAMILY SSF48208 190 590 5.44E-103 T 05-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AC028_RS02165 ba9e7ad8813a089be1b2682eee7b2a7c 356 Gene3D G3DSA:2.40.50.100 62 95 1.1E-12 T 05-07-2017 AC028_RS02165 ba9e7ad8813a089be1b2682eee7b2a7c 356 Gene3D G3DSA:2.40.50.100 156 187 1.1E-12 T 05-07-2017 AC028_RS02165 ba9e7ad8813a089be1b2682eee7b2a7c 356 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 341 7.7E-78 T 05-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AC028_RS02165 ba9e7ad8813a089be1b2682eee7b2a7c 356 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 261 8.4E-32 T 05-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_RS02165 ba9e7ad8813a089be1b2682eee7b2a7c 356 SUPERFAMILY SSF111369 52 267 2.09E-41 T 05-07-2017 AC028_RS01890 2129e5368a5f36c8c32a14e82f9a8d3d 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 210 221 4.1E-21 T 05-07-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial AC028_RS01890 2129e5368a5f36c8c32a14e82f9a8d3d 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 222 237 4.1E-21 T 05-07-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial AC028_RS01890 2129e5368a5f36c8c32a14e82f9a8d3d 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 199 209 4.1E-21 T 05-07-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial AC028_RS01890 2129e5368a5f36c8c32a14e82f9a8d3d 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 142 159 4.1E-21 T 05-07-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial AC028_RS01890 2129e5368a5f36c8c32a14e82f9a8d3d 287 Pfam PF01478 Type IV leader peptidase family 133 241 1.0E-23 T 05-07-2017 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AC028_RS01890 2129e5368a5f36c8c32a14e82f9a8d3d 287 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 18 123 2.0E-26 T 05-07-2017 IPR010627 Peptidase A24A, N-terminal AC028_RS10780 c509c5de9c10ec8605088c736d46d824 844 SUPERFAMILY SSF82171 252 552 4.19E-19 T 05-07-2017 AC028_RS10780 c509c5de9c10ec8605088c736d46d824 844 SUPERFAMILY SSF82171 116 212 4.19E-19 T 05-07-2017 AC028_RS10780 c509c5de9c10ec8605088c736d46d824 844 SUPERFAMILY SSF53474 574 832 3.44E-45 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS10780 c509c5de9c10ec8605088c736d46d824 844 Gene3D G3DSA:2.120.10.30 424 514 1.1E-19 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS10780 c509c5de9c10ec8605088c736d46d824 844 Gene3D G3DSA:2.120.10.30 104 214 1.1E-19 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS10780 c509c5de9c10ec8605088c736d46d824 844 Gene3D G3DSA:2.120.10.30 254 370 1.1E-19 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS10780 c509c5de9c10ec8605088c736d46d824 844 Gene3D G3DSA:3.40.50.1820 573 832 5.6E-49 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS10780 c509c5de9c10ec8605088c736d46d824 844 Pfam PF00326 Prolyl oligopeptidase family 675 833 2.2E-24 T 05-07-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AC028_RS20435 4da92a61c2a5a49a09dcfb7ba64400d0 420 Pfam PF06057 Bacterial virulence protein (VirJ) 218 408 7.5E-84 T 05-07-2017 IPR010333 Bacterial virulence AC028_RS20435 4da92a61c2a5a49a09dcfb7ba64400d0 420 Gene3D G3DSA:3.40.50.1820 216 325 4.6E-6 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS20435 4da92a61c2a5a49a09dcfb7ba64400d0 420 SUPERFAMILY SSF53474 39 193 2.79E-5 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS20435 4da92a61c2a5a49a09dcfb7ba64400d0 420 SUPERFAMILY SSF53474 213 405 5.24E-21 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS22255 7964027a1d8e912037de5134c38c8c44 652 SMART SM00304 520 573 120.0 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS22255 7964027a1d8e912037de5134c38c8c44 652 SMART SM00304 34 91 6.4 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS22255 7964027a1d8e912037de5134c38c8c44 652 SMART SM00304 128 181 27.0 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS22255 7964027a1d8e912037de5134c38c8c44 652 SMART SM00304 307 359 3.4E-5 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS22255 7964027a1d8e912037de5134c38c8c44 652 SMART SM00304 218 271 29.0 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS22255 7964027a1d8e912037de5134c38c8c44 652 SUPERFAMILY SSF58104 327 594 3.01E-62 T 05-07-2017 AC028_RS22255 7964027a1d8e912037de5134c38c8c44 652 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 433 591 1.2E-38 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS22255 7964027a1d8e912037de5134c38c8c44 652 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 451 478 6.3E-27 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS22255 7964027a1d8e912037de5134c38c8c44 652 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 480 509 6.3E-27 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS22255 7964027a1d8e912037de5134c38c8c44 652 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 374 403 6.3E-27 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS22255 7964027a1d8e912037de5134c38c8c44 652 SMART SM00283 360 593 1.3E-67 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS22255 7964027a1d8e912037de5134c38c8c44 652 Gene3D G3DSA:1.10.287.950 377 563 5.7E-43 T 05-07-2017 AC028_RS02745 0f7a7437efa197f82734afd2994553d7 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.0E-15 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS02745 0f7a7437efa197f82734afd2994553d7 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.0E-15 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS02745 0f7a7437efa197f82734afd2994553d7 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.0E-15 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS02745 0f7a7437efa197f82734afd2994553d7 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.0E-15 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS02745 0f7a7437efa197f82734afd2994553d7 271 Gene3D G3DSA:3.40.50.720 2 239 3.4E-50 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS02745 0f7a7437efa197f82734afd2994553d7 271 SUPERFAMILY SSF51735 1 242 1.02E-48 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS02745 0f7a7437efa197f82734afd2994553d7 271 Pfam PF00106 short chain dehydrogenase 6 200 2.5E-32 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS20245 3e5464f049e114deda8ac2e57615a908 230 Gene3D G3DSA:3.40.50.1000 87 222 7.9E-36 T 05-07-2017 IPR023214 HAD-like domain AC028_RS20245 3e5464f049e114deda8ac2e57615a908 230 Gene3D G3DSA:3.40.50.1000 14 29 7.9E-36 T 05-07-2017 IPR023214 HAD-like domain AC028_RS20245 3e5464f049e114deda8ac2e57615a908 230 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 71 188 1.6E-8 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS20245 3e5464f049e114deda8ac2e57615a908 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 7.6E-6 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS20245 3e5464f049e114deda8ac2e57615a908 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 7.6E-6 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS20245 3e5464f049e114deda8ac2e57615a908 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 7.6E-6 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS20245 3e5464f049e114deda8ac2e57615a908 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 13 24 7.6E-6 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS20245 3e5464f049e114deda8ac2e57615a908 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 16 194 1.7E-29 T 05-07-2017 IPR023214 HAD-like domain AC028_RS20245 3e5464f049e114deda8ac2e57615a908 230 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 16 221 2.1E-75 T 05-07-2017 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AC028_RS20245 3e5464f049e114deda8ac2e57615a908 230 Gene3D G3DSA:1.10.150.240 30 86 4.0E-5 T 05-07-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 AC028_RS20245 3e5464f049e114deda8ac2e57615a908 230 SUPERFAMILY SSF56784 14 222 2.94E-51 T 05-07-2017 IPR023214 HAD-like domain AC028_RS21300 0566adc40e5099030a85e8a94a604bac 792 Gene3D G3DSA:3.30.70.380 700 791 6.8E-27 T 05-07-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AC028_RS21300 0566adc40e5099030a85e8a94a604bac 792 SUPERFAMILY SSF54991 694 791 3.53E-27 T 05-07-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AC028_RS21300 0566adc40e5099030a85e8a94a604bac 792 Gene3D G3DSA:3.30.56.10 154 182 1.3E-23 T 05-07-2017 AC028_RS21300 0566adc40e5099030a85e8a94a604bac 792 Gene3D G3DSA:3.30.56.10 1 38 1.3E-23 T 05-07-2017 AC028_RS21300 0566adc40e5099030a85e8a94a604bac 792 Gene3D G3DSA:3.30.930.10 488 688 2.0E-61 T 05-07-2017 AC028_RS21300 0566adc40e5099030a85e8a94a604bac 792 SUPERFAMILY SSF55681 466 685 9.44E-49 T 05-07-2017 AC028_RS21300 0566adc40e5099030a85e8a94a604bac 792 SMART SM00873 211 384 1.1E-85 T 05-07-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AC028_RS21300 0566adc40e5099030a85e8a94a604bac 792 Gene3D G3DSA:2.40.50.140 42 152 3.0E-39 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS21300 0566adc40e5099030a85e8a94a604bac 792 Pfam PF03483 B3/4 domain 212 384 6.7E-64 T 05-07-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AC028_RS21300 0566adc40e5099030a85e8a94a604bac 792 SUPERFAMILY SSF50249 36 190 4.16E-43 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS21300 0566adc40e5099030a85e8a94a604bac 792 SUPERFAMILY SSF56037 196 392 1.57E-68 T 05-07-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 AC028_RS21300 0566adc40e5099030a85e8a94a604bac 792 Gene3D G3DSA:3.50.40.10 200 391 1.0E-74 T 05-07-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 AC028_RS21300 0566adc40e5099030a85e8a94a604bac 792 SUPERFAMILY SSF46955 402 474 4.49E-18 T 05-07-2017 IPR009061 Putative DNA-binding domain AC028_RS21300 0566adc40e5099030a85e8a94a604bac 792 Pfam PF01588 Putative tRNA binding domain 45 144 1.9E-24 T 05-07-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AC028_RS21300 0566adc40e5099030a85e8a94a604bac 792 Pfam PF03484 tRNA synthetase B5 domain 405 470 5.6E-17 T 05-07-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AC028_RS21300 0566adc40e5099030a85e8a94a604bac 792 SMART SM00874 402 470 1.3E-27 T 05-07-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AC028_RS21300 0566adc40e5099030a85e8a94a604bac 792 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 1.1E-229 T 05-07-2017 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AC028_RS21300 0566adc40e5099030a85e8a94a604bac 792 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 44.077 T 05-07-2017 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AC028_RS21300 0566adc40e5099030a85e8a94a604bac 792 Gene3D G3DSA:3.30.56.20 401 474 1.8E-24 T 05-07-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AC028_RS21300 0566adc40e5099030a85e8a94a604bac 792 SMART SM00896 698 791 3.1E-38 T 05-07-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AC028_RS21300 0566adc40e5099030a85e8a94a604bac 792 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 791 1.0E-25 T 05-07-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AC028_RS22190 4e6a11a5958a39fccd84bde419cf8402 203 Gene3D G3DSA:3.40.630.30 23 174 3.5E-15 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS22190 4e6a11a5958a39fccd84bde419cf8402 203 SUPERFAMILY SSF55729 23 177 1.92E-15 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS07515 fea31b1b98ae36a3952fd7ce29e980fc 285 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 72 278 4.1E-74 T 05-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AC028_RS07515 fea31b1b98ae36a3952fd7ce29e980fc 285 SUPERFAMILY SSF56529 61 279 4.32E-85 T 05-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AC028_RS07515 fea31b1b98ae36a3952fd7ce29e980fc 285 Gene3D G3DSA:3.90.850.10 66 280 4.6E-91 T 05-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AC028_RS02425 c6afbde6ed3954f6b547e1fceb8b4d5e 326 SUPERFAMILY SSF118215 22 326 3.53E-64 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS02425 c6afbde6ed3954f6b547e1fceb8b4d5e 326 Pfam PF00375 Sodium:dicarboxylate symporter family 22 326 8.5E-71 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS02425 c6afbde6ed3954f6b547e1fceb8b4d5e 326 PRINTS PR00173 Glutamate-aspartate symporter signature 176 198 1.6E-12 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS02425 c6afbde6ed3954f6b547e1fceb8b4d5e 326 PRINTS PR00173 Glutamate-aspartate symporter signature 69 89 1.6E-12 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS02425 c6afbde6ed3954f6b547e1fceb8b4d5e 326 PRINTS PR00173 Glutamate-aspartate symporter signature 99 124 1.6E-12 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS02425 c6afbde6ed3954f6b547e1fceb8b4d5e 326 Gene3D G3DSA:1.10.3860.10 20 326 5.7E-70 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS02770 710e2c2a75a048eb05e6c861c43861a6 194 SMART SM00464 8 193 7.8E-5 T 05-07-2017 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AC028_RS02770 710e2c2a75a048eb05e6c861c43861a6 194 SUPERFAMILY SSF88697 8 193 5.96E-43 T 05-07-2017 IPR015947 PUA-like domain AC028_RS02770 710e2c2a75a048eb05e6c861c43861a6 194 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 8 193 5.7E-15 T 05-07-2017 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AC028_RS15630 70a54ad46565fa25e7edb3eff5bb61d8 166 Gene3D G3DSA:1.10.10.10 24 162 2.4E-32 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS15630 70a54ad46565fa25e7edb3eff5bb61d8 166 SUPERFAMILY SSF46785 21 160 2.59E-29 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS15630 70a54ad46565fa25e7edb3eff5bb61d8 166 Pfam PF01047 MarR family 52 111 1.6E-15 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS15630 70a54ad46565fa25e7edb3eff5bb61d8 166 SMART SM00347 45 147 1.2E-23 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS15630 70a54ad46565fa25e7edb3eff5bb61d8 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 87 1.4E-11 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS15630 70a54ad46565fa25e7edb3eff5bb61d8 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 107 123 1.4E-11 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS15630 70a54ad46565fa25e7edb3eff5bb61d8 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 137 157 1.4E-11 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS15630 70a54ad46565fa25e7edb3eff5bb61d8 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 103 1.4E-11 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS01875 008eab190f6adf98df49a613627500af 137 Gene3D G3DSA:3.30.700.10 7 137 4.3E-29 T 05-07-2017 AC028_RS01875 008eab190f6adf98df49a613627500af 137 Pfam PF00114 Pilin (bacterial filament) 36 136 9.4E-11 T 05-07-2017 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 AC028_RS01875 008eab190f6adf98df49a613627500af 137 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 2.3E-8 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS01875 008eab190f6adf98df49a613627500af 137 SUPERFAMILY SSF54523 7 136 3.87E-20 T 05-07-2017 AC028_RS01875 008eab190f6adf98df49a613627500af 137 Pfam PF13633 Prokaryotic N-terminal methylation site 5 30 1.7E-10 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS10160 90d70e622bed513a79878aaf9a695640 394 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 83 322 4.5E-44 T 05-07-2017 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA Reactome: R-HSA-6799198 AC028_RS10160 90d70e622bed513a79878aaf9a695640 394 Gene3D G3DSA:3.40.50.150 86 185 9.4E-5 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS10160 90d70e622bed513a79878aaf9a695640 394 SUPERFAMILY SSF53335 21 379 1.63E-85 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS06570 23171fbba829bf09588a49e59b5701b6 421 PRINTS PR01035 Tetracycline resistance protein signature 89 113 9.2E-57 T 05-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AC028_RS06570 23171fbba829bf09588a49e59b5701b6 421 PRINTS PR01035 Tetracycline resistance protein signature 263 283 9.2E-57 T 05-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AC028_RS06570 23171fbba829bf09588a49e59b5701b6 421 PRINTS PR01035 Tetracycline resistance protein signature 27 43 9.2E-57 T 05-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AC028_RS06570 23171fbba829bf09588a49e59b5701b6 421 PRINTS PR01035 Tetracycline resistance protein signature 234 251 9.2E-57 T 05-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AC028_RS06570 23171fbba829bf09588a49e59b5701b6 421 PRINTS PR01035 Tetracycline resistance protein signature 291 312 9.2E-57 T 05-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AC028_RS06570 23171fbba829bf09588a49e59b5701b6 421 PRINTS PR01035 Tetracycline resistance protein signature 351 374 9.2E-57 T 05-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AC028_RS06570 23171fbba829bf09588a49e59b5701b6 421 PRINTS PR01035 Tetracycline resistance protein signature 116 137 9.2E-57 T 05-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AC028_RS06570 23171fbba829bf09588a49e59b5701b6 421 PRINTS PR01035 Tetracycline resistance protein signature 174 194 9.2E-57 T 05-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AC028_RS06570 23171fbba829bf09588a49e59b5701b6 421 PRINTS PR01035 Tetracycline resistance protein signature 146 168 9.2E-57 T 05-07-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AC028_RS06570 23171fbba829bf09588a49e59b5701b6 421 Pfam PF07690 Major Facilitator Superfamily 21 367 2.3E-53 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS06570 23171fbba829bf09588a49e59b5701b6 421 Gene3D G3DSA:1.20.1250.20 14 202 1.5E-40 T 05-07-2017 AC028_RS06570 23171fbba829bf09588a49e59b5701b6 421 Gene3D G3DSA:1.20.1250.20 223 400 2.9E-18 T 05-07-2017 AC028_RS06570 23171fbba829bf09588a49e59b5701b6 421 SUPERFAMILY SSF103473 13 407 8.24E-70 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS06555 23d616527936e43535c239068a8f15fe 393 Pfam PF03594 Benzoate membrane transport protein 10 383 4.8E-136 T 05-07-2017 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AC028_RS06555 23d616527936e43535c239068a8f15fe 393 TIGRFAM TIGR00843 benE: benzoate transporter 12 385 5.2E-122 T 05-07-2017 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AC028_RS11610 c5335bc070d1a84cd21cc1ea955f8a34 1404 Gene3D G3DSA:2.40.50.100 1157 1208 2.7E-7 T 05-07-2017 AC028_RS11610 c5335bc070d1a84cd21cc1ea955f8a34 1404 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 715 32.235 T 05-07-2017 AC028_RS11610 c5335bc070d1a84cd21cc1ea955f8a34 1404 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1376 10.504 T 05-07-2017 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11610 c5335bc070d1a84cd21cc1ea955f8a34 1404 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 2.1E-77 T 05-07-2017 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11610 c5335bc070d1a84cd21cc1ea955f8a34 1404 Pfam PF04997 RNA polymerase Rpb1, domain 1 17 342 1.6E-86 T 05-07-2017 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11610 c5335bc070d1a84cd21cc1ea955f8a34 1404 SUPERFAMILY SSF64484 16 945 0.0 T 05-07-2017 AC028_RS11610 c5335bc070d1a84cd21cc1ea955f8a34 1404 SUPERFAMILY SSF64484 1134 1363 0.0 T 05-07-2017 AC028_RS11610 c5335bc070d1a84cd21cc1ea955f8a34 1404 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.5E-27 T 05-07-2017 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11610 c5335bc070d1a84cd21cc1ea955f8a34 1404 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 3.7E-8 T 05-07-2017 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11610 c5335bc070d1a84cd21cc1ea955f8a34 1404 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 05-07-2017 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11610 c5335bc070d1a84cd21cc1ea955f8a34 1404 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 6.9E-19 T 05-07-2017 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11610 c5335bc070d1a84cd21cc1ea955f8a34 1404 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 1.1E-27 T 05-07-2017 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11610 c5335bc070d1a84cd21cc1ea955f8a34 1404 SMART SM00663 235 514 1.1E-183 T 05-07-2017 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AC028_RS11610 c5335bc070d1a84cd21cc1ea955f8a34 1404 Gene3D G3DSA:2.40.40.20 349 376 1.1E-37 T 05-07-2017 AC028_RS11610 c5335bc070d1a84cd21cc1ea955f8a34 1404 Gene3D G3DSA:2.40.40.20 417 489 1.1E-37 T 05-07-2017 AC028_RS13795 2c5ede62051a45d6769ef0798b7e8bca 142 Gene3D G3DSA:3.10.180.10 7 138 4.8E-37 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS13795 2c5ede62051a45d6769ef0798b7e8bca 142 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 2 135 5.0E-6 T 05-07-2017 IPR028973 PhnB-like AC028_RS13795 2c5ede62051a45d6769ef0798b7e8bca 142 SUPERFAMILY SSF54593 2 137 3.6E-30 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS18720 55ac931d7ef16f19f65a0e9cca02a787 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 4.7E-34 T 05-07-2017 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 AC028_RS18720 55ac931d7ef16f19f65a0e9cca02a787 106 Gene3D G3DSA:3.30.1390.10 9 106 8.8E-44 T 05-07-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AC028_RS18720 55ac931d7ef16f19f65a0e9cca02a787 106 SUPERFAMILY SSF54736 21 105 2.14E-32 T 05-07-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AC028_RS18720 55ac931d7ef16f19f65a0e9cca02a787 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 4 101 28.651 T 05-07-2017 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AC028_RS16855 b0f00c4e7fa34fcd751757ba20d54ad6 822 Pfam PF01011 PQQ enzyme repeat 458 487 1.5E-4 T 05-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat AC028_RS16855 b0f00c4e7fa34fcd751757ba20d54ad6 822 Gene3D G3DSA:2.140.10.10 587 821 9.1E-141 T 05-07-2017 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AC028_RS16855 b0f00c4e7fa34fcd751757ba20d54ad6 822 Gene3D G3DSA:2.140.10.10 182 552 9.1E-141 T 05-07-2017 IPR027295 Quinoprotein alcohol dehydrogenase-like domain AC028_RS16855 b0f00c4e7fa34fcd751757ba20d54ad6 822 Pfam PF13360 PQQ-like domain 696 795 6.6E-6 T 05-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat AC028_RS16855 b0f00c4e7fa34fcd751757ba20d54ad6 822 Pfam PF13360 PQQ-like domain 224 397 7.9E-8 T 05-07-2017 IPR002372 Pyrrolo-quinoline quinone repeat AC028_RS16855 b0f00c4e7fa34fcd751757ba20d54ad6 822 SUPERFAMILY SSF50998 669 818 2.62E-143 T 05-07-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AC028_RS16855 b0f00c4e7fa34fcd751757ba20d54ad6 822 SUPERFAMILY SSF50998 576 642 2.62E-143 T 05-07-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AC028_RS16855 b0f00c4e7fa34fcd751757ba20d54ad6 822 SUPERFAMILY SSF50998 182 540 2.62E-143 T 05-07-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AC028_RS16855 b0f00c4e7fa34fcd751757ba20d54ad6 822 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 18 818 0.0 T 05-07-2017 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 AC028_RS16855 b0f00c4e7fa34fcd751757ba20d54ad6 822 SMART SM00564 358 399 130.0 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS16855 b0f00c4e7fa34fcd751757ba20d54ad6 822 SMART SM00564 302 343 450.0 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS16855 b0f00c4e7fa34fcd751757ba20d54ad6 822 SMART SM00564 440 477 720.0 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS16855 b0f00c4e7fa34fcd751757ba20d54ad6 822 SMART SM00564 741 774 0.0037 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS16855 b0f00c4e7fa34fcd751757ba20d54ad6 822 SMART SM00564 236 267 2.5E-5 T 05-07-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AC028_RS15065 93aee7f258d11daac2cec2829e5d4d75 377 SUPERFAMILY SSF52540 7 337 2.02E-70 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS15065 93aee7f258d11daac2cec2829e5d4d75 377 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 6 341 1.4E-133 T 05-07-2017 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 AC028_RS15065 93aee7f258d11daac2cec2829e5d4d75 377 Gene3D G3DSA:3.40.50.300 102 340 8.5E-64 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS15065 93aee7f258d11daac2cec2829e5d4d75 377 Pfam PF00437 Type II/IV secretion system protein 10 257 8.2E-37 T 05-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AC028_RS06590 25a143aced51bc6c25137b1b6374deb5 289 Pfam PF01925 Sulfite exporter TauE/SafE 35 273 1.3E-37 T 05-07-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 AC028_RS02310 3a4532ff52970582daf06c1e321357d3 257 Pfam PF02265 S1/P1 Nuclease 13 254 4.1E-65 T 05-07-2017 IPR003154 S1/P1 nuclease GO:0003676|GO:0004519|GO:0006308 AC028_RS02310 3a4532ff52970582daf06c1e321357d3 257 SUPERFAMILY SSF48537 13 252 3.01E-62 T 05-07-2017 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 AC028_RS02310 3a4532ff52970582daf06c1e321357d3 257 Gene3D G3DSA:1.10.575.10 13 255 2.4E-71 T 05-07-2017 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 AC028_RS00215 df0a7f7b8690791223e4f74f99cd14f5 144 Pfam PF02566 OsmC-like protein 42 138 6.1E-22 T 05-07-2017 IPR003718 OsmC/Ohr family AC028_RS00215 df0a7f7b8690791223e4f74f99cd14f5 144 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 139 1.3E-57 T 05-07-2017 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 AC028_RS00215 df0a7f7b8690791223e4f74f99cd14f5 144 SUPERFAMILY SSF82784 2 140 6.67E-37 T 05-07-2017 IPR003718 OsmC/Ohr family AC028_RS00215 df0a7f7b8690791223e4f74f99cd14f5 144 Gene3D G3DSA:3.30.300.20 4 141 3.5E-49 T 05-07-2017 IPR015946 K homology domain-like, alpha/beta AC028_RS03795 766a9bd0b115901f0038cf589f0ed941 166 Pfam PF01863 Protein of unknown function DUF45 95 154 2.4E-12 T 05-07-2017 IPR002725 Protein of unknown function DUF45 AC028_RS20995 74badf0d9c8ed81208a450ec6e8d4fa1 791 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 56 570 2.2E-165 T 05-07-2017 IPR012878 Beta-L-arabinofuranosidase, GH127 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 AC028_RS20995 74badf0d9c8ed81208a450ec6e8d4fa1 791 SUPERFAMILY SSF48208 182 409 1.7E-11 T 05-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AC028_RS20995 74badf0d9c8ed81208a450ec6e8d4fa1 791 SUPERFAMILY SSF48208 103 145 1.7E-11 T 05-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AC028_RS18885 a8c1d8b787fbeac23f1eb9b3cc95006a 91 Pfam PF04193 PQ loop repeat 4 58 3.1E-5 T 05-07-2017 IPR006603 PQ-loop repeat AC028_RS07560 3361db984cda675ea15c4b007ac3bd40 302 Pfam PF14415 Domain of unknown function (DUF4424) 23 296 7.1E-84 T 05-07-2017 IPR025538 Domain of unknown function DUF4424 AC028_RS08625 af7149946e3fea170eb04c535907e30a 357 Pfam PF14305 TupA-like ATPgrasp 91 332 9.8E-35 T 05-07-2017 IPR029465 TupA-like ATPgrasp protein AC028_RS01005 a3de5c8371f5759955a9b165c1341dfb 266 SUPERFAMILY SSF56655 6 258 7.2E-75 T 05-07-2017 AC028_RS01005 a3de5c8371f5759955a9b165c1341dfb 266 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 254 7.9E-94 T 05-07-2017 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 AC028_RS01005 a3de5c8371f5759955a9b165c1341dfb 266 Gene3D G3DSA:3.40.190.80 164 257 8.3E-40 T 05-07-2017 AC028_RS01005 a3de5c8371f5759955a9b165c1341dfb 266 Gene3D G3DSA:3.30.540.10 7 163 9.6E-45 T 05-07-2017 AC028_RS01005 a3de5c8371f5759955a9b165c1341dfb 266 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 86 99 - T 05-07-2017 IPR020583 Inositol monophosphatase, metal-binding site AC028_RS01005 a3de5c8371f5759955a9b165c1341dfb 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 86 102 6.2E-7 T 05-07-2017 IPR000760 Inositol monophosphatase GO:0046854 AC028_RS01005 a3de5c8371f5759955a9b165c1341dfb 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 6.2E-7 T 05-07-2017 IPR000760 Inositol monophosphatase GO:0046854 AC028_RS01005 a3de5c8371f5759955a9b165c1341dfb 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 6.2E-7 T 05-07-2017 IPR000760 Inositol monophosphatase GO:0046854 AC028_RS01005 a3de5c8371f5759955a9b165c1341dfb 266 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 05-07-2017 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AC028_RS01005 a3de5c8371f5759955a9b165c1341dfb 266 Pfam PF00459 Inositol monophosphatase family 8 244 1.4E-48 T 05-07-2017 IPR000760 Inositol monophosphatase GO:0046854 AC028_RS09135 4354f99c5c6dc0081a6b7889c01cc372 288 SUPERFAMILY SSF53474 23 285 7.56E-48 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS09135 4354f99c5c6dc0081a6b7889c01cc372 288 Pfam PF00561 alpha/beta hydrolase fold 28 145 1.7E-18 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS09135 4354f99c5c6dc0081a6b7889c01cc372 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 2.5E-6 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS09135 4354f99c5c6dc0081a6b7889c01cc372 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 52 67 2.5E-6 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS09135 4354f99c5c6dc0081a6b7889c01cc372 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 2.5E-6 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS09135 4354f99c5c6dc0081a6b7889c01cc372 288 Gene3D G3DSA:3.40.50.1820 22 283 4.1E-46 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS10825 9ff5cf03ee8f77b0dccd37167fb66dfb 536 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 158 172 - T 05-07-2017 IPR033379 Histidine acid phosphatase active site AC028_RS10825 9ff5cf03ee8f77b0dccd37167fb66dfb 536 Gene3D G3DSA:3.40.50.1240 399 533 1.3E-60 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS10825 9ff5cf03ee8f77b0dccd37167fb66dfb 536 Gene3D G3DSA:3.40.50.1240 156 267 1.3E-60 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS10825 9ff5cf03ee8f77b0dccd37167fb66dfb 536 Gene3D G3DSA:3.40.50.1240 268 396 6.4E-36 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS10825 9ff5cf03ee8f77b0dccd37167fb66dfb 536 SUPERFAMILY SSF53254 154 525 8.01E-53 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS10825 9ff5cf03ee8f77b0dccd37167fb66dfb 536 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 157 262 6.6E-9 T 05-07-2017 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 AC028_RS11680 31b7a5d0fedf78ee55f98f3d0e9fd2c7 61 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 55 2.4E-19 T 05-07-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11680 31b7a5d0fedf78ee55f98f3d0e9fd2c7 61 SUPERFAMILY SSF46561 1 58 9.42E-18 T 05-07-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11680 31b7a5d0fedf78ee55f98f3d0e9fd2c7 61 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 14.94 T 05-07-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11680 31b7a5d0fedf78ee55f98f3d0e9fd2c7 61 Gene3D G3DSA:1.10.287.310 1 57 2.5E-21 T 05-07-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS11680 31b7a5d0fedf78ee55f98f3d0e9fd2c7 61 Pfam PF00831 Ribosomal L29 protein 4 57 3.1E-20 T 05-07-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS12455 6620298de18724e84116494be6156261 890 Pfam PF01433 Peptidase family M1 42 429 2.5E-119 T 05-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AC028_RS12455 6620298de18724e84116494be6156261 890 SUPERFAMILY SSF63737 41 238 2.35E-49 T 05-07-2017 AC028_RS12455 6620298de18724e84116494be6156261 890 Gene3D G3DSA:1.10.390.10 350 498 3.8E-45 T 05-07-2017 AC028_RS12455 6620298de18724e84116494be6156261 890 Pfam PF11838 ERAP1-like C-terminal domain 560 868 1.6E-41 T 05-07-2017 IPR024571 ERAP1-like C-terminal domain AC028_RS12455 6620298de18724e84116494be6156261 890 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 221 236 3.3E-23 T 05-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AC028_RS12455 6620298de18724e84116494be6156261 890 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 173 188 3.3E-23 T 05-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AC028_RS12455 6620298de18724e84116494be6156261 890 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 337 352 3.3E-23 T 05-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AC028_RS12455 6620298de18724e84116494be6156261 890 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 356 368 3.3E-23 T 05-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AC028_RS12455 6620298de18724e84116494be6156261 890 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 301 311 3.3E-23 T 05-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AC028_RS12455 6620298de18724e84116494be6156261 890 SUPERFAMILY SSF55486 248 497 5.13E-71 T 05-07-2017 AC028_RS18735 9ce20a0f94ef0776e8ae717572b57351 249 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 39 209 5.1E-70 T 05-07-2017 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 AC028_RS18735 9ce20a0f94ef0776e8ae717572b57351 249 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 43 219 7.7E-59 T 05-07-2017 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 AC028_RS18735 9ce20a0f94ef0776e8ae717572b57351 249 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 249 96.323 T 05-07-2017 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 AC028_RS18735 9ce20a0f94ef0776e8ae717572b57351 249 SUPERFAMILY SSF55729 11 232 1.59E-86 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS04665 e60c158f5a278a70c9379bbff665d6be 347 Pfam PF04332 Protein of unknown function (DUF475) 49 339 4.4E-129 T 05-07-2017 IPR007427 Protein of unknown function DUF475 AC028_RS21015 2533f109ac786ae4c0d575e12ea2af8f 1452 Pfam PF07532 Bacterial Ig-like domain (group 4) 1302 1353 2.3E-8 T 05-07-2017 IPR011081 Bacterial Ig-related KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 AC028_RS21015 2533f109ac786ae4c0d575e12ea2af8f 1452 Pfam PF07532 Bacterial Ig-like domain (group 4) 1379 1432 7.1E-9 T 05-07-2017 IPR011081 Bacterial Ig-related KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 AC028_RS21015 2533f109ac786ae4c0d575e12ea2af8f 1452 Pfam PF00754 F5/8 type C domain 889 1014 1.7E-6 T 05-07-2017 IPR000421 Coagulation factor 5/8 C-terminal domain AC028_RS21015 2533f109ac786ae4c0d575e12ea2af8f 1452 SUPERFAMILY SSF49785 876 1026 8.51E-10 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS21015 2533f109ac786ae4c0d575e12ea2af8f 1452 Gene3D G3DSA:2.60.120.260 876 1026 1.4E-12 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS21015 2533f109ac786ae4c0d575e12ea2af8f 1452 SUPERFAMILY SSF48208 302 786 2.32E-16 T 05-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AC028_RS19675 bd6f4f07eea993ff8fab29e1c6514839 249 Pfam PF17194 Transcriptional regulator, AbiEi antitoxin N-terminal domain 10 99 3.6E-27 T 05-07-2017 IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain AC028_RS19675 bd6f4f07eea993ff8fab29e1c6514839 249 Pfam PF11459 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 102 244 1.5E-38 T 05-07-2017 IPR021561 Transcriptional regulator, AbiEi 3 antitoxin, Type IV TA system AC028_RS01000 01baa09dc8f4aff01eca57b72c756a6e 339 SUPERFAMILY SSF101386 9 110 6.87E-23 T 05-07-2017 AC028_RS01000 01baa09dc8f4aff01eca57b72c756a6e 339 Gene3D G3DSA:1.10.287.1080 23 78 6.9E-8 T 05-07-2017 AC028_RS01000 01baa09dc8f4aff01eca57b72c756a6e 339 Gene3D G3DSA:1.10.287.1080 140 228 2.0E-13 T 05-07-2017 AC028_RS01000 01baa09dc8f4aff01eca57b72c756a6e 339 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 33 106 1.2E-27 T 05-07-2017 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AC028_RS01000 01baa09dc8f4aff01eca57b72c756a6e 339 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 174 236 4.0E-7 T 05-07-2017 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AC028_RS01000 01baa09dc8f4aff01eca57b72c756a6e 339 TIGRFAM TIGR00444 mazG: MazG family protein 16 267 1.5E-91 T 05-07-2017 IPR011551 NTP pyrophosphohydrolase MazG AC028_RS01000 01baa09dc8f4aff01eca57b72c756a6e 339 SUPERFAMILY SSF101386 145 245 4.42E-24 T 05-07-2017 AC028_RS00740 22afa2f335564c3d3d800b753692d312 388 SUPERFAMILY SSF56059 1 169 3.88E-82 T 05-07-2017 AC028_RS00740 22afa2f335564c3d3d800b753692d312 388 SUPERFAMILY SSF56059 268 385 3.88E-82 T 05-07-2017 AC028_RS00740 22afa2f335564c3d3d800b753692d312 388 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 386 1.3E-146 T 05-07-2017 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain AC028_RS00740 22afa2f335564c3d3d800b753692d312 388 SUPERFAMILY SSF52440 175 280 6.04E-36 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS06615 1a19a2deca87732dcd208a91f774d66b 150 SUPERFAMILY SSF46785 7 144 1.19E-28 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS06615 1a19a2deca87732dcd208a91f774d66b 150 Gene3D G3DSA:1.10.10.10 7 141 7.5E-31 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS06615 1a19a2deca87732dcd208a91f774d66b 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 6.5E-12 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS06615 1a19a2deca87732dcd208a91f774d66b 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 6.5E-12 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS06615 1a19a2deca87732dcd208a91f774d66b 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 6.5E-12 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS06615 1a19a2deca87732dcd208a91f774d66b 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 6.5E-12 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS06615 1a19a2deca87732dcd208a91f774d66b 150 SMART SM00347 28 129 9.3E-14 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS06615 1a19a2deca87732dcd208a91f774d66b 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 05-07-2017 IPR023187 Transcriptional regulator MarR-type, conserved site AC028_RS06615 1a19a2deca87732dcd208a91f774d66b 150 Pfam PF12802 MarR family 43 93 9.3E-10 T 05-07-2017 AC028_RS02045 212163a5a841ac058030617346d5881a 472 Pfam PF04389 Peptidase family M28 255 444 1.9E-24 T 05-07-2017 IPR007484 Peptidase M28 AC028_RS02045 212163a5a841ac058030617346d5881a 472 Gene3D G3DSA:3.40.630.10 49 97 4.1E-56 T 05-07-2017 AC028_RS02045 212163a5a841ac058030617346d5881a 472 Gene3D G3DSA:3.40.630.10 254 456 4.1E-56 T 05-07-2017 AC028_RS02045 212163a5a841ac058030617346d5881a 472 SUPERFAMILY SSF53187 49 93 4.37E-49 T 05-07-2017 AC028_RS02045 212163a5a841ac058030617346d5881a 472 SUPERFAMILY SSF53187 247 456 4.37E-49 T 05-07-2017 AC028_RS17155 bef0cc260143903a5169d0147b430345 232 Pfam PF08241 Methyltransferase domain 50 147 9.2E-19 T 05-07-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AC028_RS17155 bef0cc260143903a5169d0147b430345 232 SUPERFAMILY SSF53335 15 204 1.27E-31 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS17155 bef0cc260143903a5169d0147b430345 232 Gene3D G3DSA:3.40.50.150 13 199 2.4E-29 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS11410 910e49ed5f4c5949ce23e890bf7d677b 184 Pfam PF01883 Domain of unknown function DUF59 86 160 1.0E-11 T 05-07-2017 IPR002744 Domain of unknown function DUF59 AC028_RS11410 910e49ed5f4c5949ce23e890bf7d677b 184 SUPERFAMILY SSF117916 82 182 2.09E-26 T 05-07-2017 AC028_RS11410 910e49ed5f4c5949ce23e890bf7d677b 184 TIGRFAM TIGR03406 FeS_long_SufT: probable FeS assembly SUF system protein SufT 9 183 5.1E-82 T 05-07-2017 IPR017776 FeS assembly SUF system protein SufT, putative AC028_RS13295 df0ec9cd84de321872673f7b19136376 373 SUPERFAMILY SSF140959 12 206 3.06E-67 T 05-07-2017 AC028_RS13295 df0ec9cd84de321872673f7b19136376 373 SUPERFAMILY SSF140959 266 353 3.06E-67 T 05-07-2017 AC028_RS13295 df0ec9cd84de321872673f7b19136376 373 Pfam PF03301 Tryptophan 2,3-dioxygenase 6 353 3.2E-59 T 05-07-2017 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AC028_RS13295 df0ec9cd84de321872673f7b19136376 373 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 6 353 33.038 T 05-07-2017 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AC028_RS21245 22def3a7efce9a92984ee59689c25f2e 349 Pfam PF13692 Glycosyl transferases group 1 171 278 4.5E-7 T 05-07-2017 AC028_RS21245 22def3a7efce9a92984ee59689c25f2e 349 SUPERFAMILY SSF53756 52 340 1.1E-15 T 05-07-2017 AC028_RS01595 ee7dd496c96e5a59a41565e5414e9451 398 Gene3D G3DSA:1.20.1250.20 5 185 1.9E-19 T 05-07-2017 AC028_RS01595 ee7dd496c96e5a59a41565e5414e9451 398 Gene3D G3DSA:1.20.1250.20 216 389 7.8E-12 T 05-07-2017 AC028_RS01595 ee7dd496c96e5a59a41565e5414e9451 398 Pfam PF07690 Major Facilitator Superfamily 21 269 3.4E-15 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS01595 ee7dd496c96e5a59a41565e5414e9451 398 SUPERFAMILY SSF103473 3 389 3.27E-36 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS03600 6ae6fab7e0e1e5a8d48edf4d478eacd5 429 Pfam PF03743 Bacterial conjugation TrbI-like protein 235 415 1.6E-57 T 05-07-2017 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AC028_RS05500 6430ecd3640bde44e516073067be330a 158 SUPERFAMILY SSF75217 8 156 9.81E-44 T 05-07-2017 IPR029028 Alpha/beta knot methyltransferases AC028_RS05500 6430ecd3640bde44e516073067be330a 158 Pfam PF00588 SpoU rRNA Methylase family 8 145 2.3E-32 T 05-07-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AC028_RS05500 6430ecd3640bde44e516073067be330a 158 Gene3D G3DSA:3.40.1280.10 6 157 1.3E-62 T 05-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AC028_RS05500 6430ecd3640bde44e516073067be330a 158 PIRSF PIRSF029256 5 158 2.9E-61 T 05-07-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AC028_RS05500 6430ecd3640bde44e516073067be330a 158 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 6 155 32.694 T 05-07-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AC028_RS18065 2c240bbb91ab1447597f7d4e3542c9ca 281 SUPERFAMILY SSF53474 1 267 1.5E-58 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS18065 2c240bbb91ab1447597f7d4e3542c9ca 281 Gene3D G3DSA:3.40.50.1820 2 267 3.3E-52 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS18065 2c240bbb91ab1447597f7d4e3542c9ca 281 Pfam PF00561 alpha/beta hydrolase fold 23 119 5.7E-18 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS18065 2c240bbb91ab1447597f7d4e3542c9ca 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 3.5E-10 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS18065 2c240bbb91ab1447597f7d4e3542c9ca 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 3.5E-10 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS18065 2c240bbb91ab1447597f7d4e3542c9ca 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 213 227 3.5E-10 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS18065 2c240bbb91ab1447597f7d4e3542c9ca 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 3.5E-10 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS18065 2c240bbb91ab1447597f7d4e3542c9ca 281 PRINTS PR00412 Epoxide hydrolase signature 45 60 5.0E-8 T 05-07-2017 IPR000639 Epoxide hydrolase-like GO:0003824 AC028_RS18065 2c240bbb91ab1447597f7d4e3542c9ca 281 PRINTS PR00412 Epoxide hydrolase signature 243 265 5.0E-8 T 05-07-2017 IPR000639 Epoxide hydrolase-like GO:0003824 AC028_RS18065 2c240bbb91ab1447597f7d4e3542c9ca 281 PRINTS PR00412 Epoxide hydrolase signature 104 117 5.0E-8 T 05-07-2017 IPR000639 Epoxide hydrolase-like GO:0003824 AC028_RS08030 74f9ec33e313ecdbe2b213366d4a4461 161 Pfam PF06127 Protein of unknown function (DUF962) 10 156 2.1E-25 T 05-07-2017 IPR009305 Protein of unknown function DUF962 AC028_RS03410 24f99548e9cb9caa4b67e6397e1fd7a6 60 Gene3D G3DSA:1.10.10.10 7 58 8.4E-9 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS03410 24f99548e9cb9caa4b67e6397e1fd7a6 60 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 7 54 3.1E-14 T 05-07-2017 IPR010093 SinI-like, DNA-binding domain GO:0003677 AC028_RS03410 24f99548e9cb9caa4b67e6397e1fd7a6 60 SUPERFAMILY SSF46955 6 56 3.11E-8 T 05-07-2017 IPR009061 Putative DNA-binding domain AC028_RS03410 24f99548e9cb9caa4b67e6397e1fd7a6 60 Pfam PF12728 Helix-turn-helix domain 6 56 3.3E-18 T 05-07-2017 AC028_RS00895 eba21775f045e428f5831c49c25934c9 534 Gene3D G3DSA:2.40.30.10 290 392 4.2E-23 T 05-07-2017 AC028_RS00895 eba21775f045e428f5831c49c25934c9 534 SUPERFAMILY SSF50447 259 391 1.09E-29 T 05-07-2017 IPR009000 Translation protein, beta-barrel domain AC028_RS00895 eba21775f045e428f5831c49c25934c9 534 Pfam PF00009 Elongation factor Tu GTP binding domain 11 275 9.4E-48 T 05-07-2017 AC028_RS00895 eba21775f045e428f5831c49c25934c9 534 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 05-07-2017 IPR031157 Tr-type G domain, conserved site AC028_RS00895 eba21775f045e428f5831c49c25934c9 534 Gene3D G3DSA:3.30.70.870 393 462 1.2E-12 T 05-07-2017 AC028_RS00895 eba21775f045e428f5831c49c25934c9 534 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 1 527 1.8E-253 T 05-07-2017 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 AC028_RS00895 eba21775f045e428f5831c49c25934c9 534 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 157 1.2E-20 T 05-07-2017 IPR005225 Small GTP-binding protein domain GO:0005525 AC028_RS00895 eba21775f045e428f5831c49c25934c9 534 SUPERFAMILY SSF52540 8 275 3.11E-85 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS00895 eba21775f045e428f5831c49c25934c9 534 Pfam PF16658 Class II release factor RF3, C-terminal domain 385 512 4.0E-46 T 05-07-2017 IPR032090 Peptide chain release factor 3, C-terminal AC028_RS00895 eba21775f045e428f5831c49c25934c9 534 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 525 53.028 T 05-07-2017 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 AC028_RS00895 eba21775f045e428f5831c49c25934c9 534 Gene3D G3DSA:3.40.50.300 6 280 3.2E-67 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS00895 eba21775f045e428f5831c49c25934c9 534 PRINTS PR00315 GTP-binding elongation factor signature 63 71 2.2E-11 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS00895 eba21775f045e428f5831c49c25934c9 534 PRINTS PR00315 GTP-binding elongation factor signature 83 93 2.2E-11 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS00895 eba21775f045e428f5831c49c25934c9 534 PRINTS PR00315 GTP-binding elongation factor signature 13 26 2.2E-11 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS00895 eba21775f045e428f5831c49c25934c9 534 PRINTS PR00315 GTP-binding elongation factor signature 135 144 2.2E-11 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS00895 eba21775f045e428f5831c49c25934c9 534 PRINTS PR00315 GTP-binding elongation factor signature 99 110 2.2E-11 T 05-07-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AC028_RS00895 eba21775f045e428f5831c49c25934c9 534 SUPERFAMILY SSF54980 391 466 4.68E-17 T 05-07-2017 IPR009022 Elongation factor G, III-V domain AC028_RS22240 d0e9ca6e5a175e19f480cb01e4c2cfc8 109 Pfam PF13466 STAS domain 14 92 2.6E-15 T 05-07-2017 IPR002645 STAS domain AC028_RS22240 d0e9ca6e5a175e19f480cb01e4c2cfc8 109 SUPERFAMILY SSF52091 1 97 5.89E-15 T 05-07-2017 IPR002645 STAS domain AC028_RS22240 d0e9ca6e5a175e19f480cb01e4c2cfc8 109 Gene3D G3DSA:3.30.750.24 12 94 3.2E-13 T 05-07-2017 IPR002645 STAS domain AC028_RS13150 eb61723c7261c139ea54db6eca87980c 121 SUPERFAMILY SSF54909 1 115 1.93E-51 T 05-07-2017 IPR011008 Dimeric alpha-beta barrel AC028_RS13150 eb61723c7261c139ea54db6eca87980c 121 PIRSF PIRSF007028 1 117 1.5E-55 T 05-07-2017 IPR009874 Protein of unknown function DUF1428 AC028_RS13150 eb61723c7261c139ea54db6eca87980c 121 Pfam PF07237 Protein of unknown function (DUF1428) 2 103 6.4E-46 T 05-07-2017 IPR009874 Protein of unknown function DUF1428 AC028_RS13150 eb61723c7261c139ea54db6eca87980c 121 Gene3D G3DSA:3.30.70.900 1 115 1.0E-54 T 05-07-2017 AC028_RS20900 a938989f6bd7997b318e800780fbb8c6 372 SUPERFAMILY SSF50956 57 367 1.96E-35 T 05-07-2017 AC028_RS20900 a938989f6bd7997b318e800780fbb8c6 372 Pfam PF02333 Phytase 229 344 1.1E-5 T 05-07-2017 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 AC028_RS20900 a938989f6bd7997b318e800780fbb8c6 372 Gene3D G3DSA:2.120.10.20 45 371 8.1E-66 T 05-07-2017 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 AC028_RS13545 642d2032ecf2788eff5b13bbf7c711c9 472 SUPERFAMILY SSF51261 177 423 7.85E-72 T 05-07-2017 IPR011055 Duplicated hybrid motif AC028_RS13545 642d2032ecf2788eff5b13bbf7c711c9 472 Gene3D G3DSA:2.70.70.10 280 424 3.5E-49 T 05-07-2017 AC028_RS13545 642d2032ecf2788eff5b13bbf7c711c9 472 Pfam PF01551 Peptidase family M23 325 421 1.3E-33 T 05-07-2017 IPR016047 Peptidase M23 AC028_RS13545 642d2032ecf2788eff5b13bbf7c711c9 472 Pfam PF04225 Opacity-associated protein A LysM-like domain 101 168 3.3E-6 T 05-07-2017 IPR007340 Opacity-associated protein A AC028_RS13995 bec8c17a903331733de78eb90ab74c1f 157 Pfam PF04361 Protein of unknown function (DUF494) 5 157 2.7E-55 T 05-07-2017 IPR007456 Smg AC028_RS13995 bec8c17a903331733de78eb90ab74c1f 157 Hamap MF_00598 Protein Smg [smg]. 5 157 30.746 T 05-07-2017 IPR007456 Smg AC028_RS22340 e51b1298f1e74fc804f6b38f63d870df 235 Gene3D G3DSA:3.40.50.300 64 141 3.1E-4 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS00265 e37b7486ec3cba32c82db2f463ddf7ae 230 Gene3D G3DSA:3.20.20.10 4 223 2.2E-86 T 05-07-2017 IPR029066 PLP-binding barrel AC028_RS00265 e37b7486ec3cba32c82db2f463ddf7ae 230 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 7 222 5.2E-71 T 05-07-2017 IPR011078 Uncharacterised protein family UPF0001 AC028_RS00265 e37b7486ec3cba32c82db2f463ddf7ae 230 PIRSF PIRSF004848 3 227 1.9E-73 T 05-07-2017 IPR011078 Uncharacterised protein family UPF0001 AC028_RS00265 e37b7486ec3cba32c82db2f463ddf7ae 230 SUPERFAMILY SSF51419 5 220 2.88E-73 T 05-07-2017 IPR029066 PLP-binding barrel AC028_RS00265 e37b7486ec3cba32c82db2f463ddf7ae 230 Pfam PF01168 Alanine racemase, N-terminal domain 17 222 7.9E-31 T 05-07-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AC028_RS08250 92bb43d35dcb6060bb7da58b67b7badd 431 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 2.1E-170 T 05-07-2017 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AC028_RS08250 92bb43d35dcb6060bb7da58b67b7badd 431 SUPERFAMILY SSF56059 104 322 1.24E-66 T 05-07-2017 AC028_RS08250 92bb43d35dcb6060bb7da58b67b7badd 431 Gene3D G3DSA:3.40.50.20 2 95 1.8E-37 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS08250 92bb43d35dcb6060bb7da58b67b7badd 431 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 1.3E-80 T 05-07-2017 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AC028_RS08250 92bb43d35dcb6060bb7da58b67b7badd 431 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 2 102 1.8E-33 T 05-07-2017 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AC028_RS08250 92bb43d35dcb6060bb7da58b67b7badd 431 Gene3D G3DSA:3.30.1490.20 122 190 1.3E-31 T 05-07-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AC028_RS08250 92bb43d35dcb6060bb7da58b67b7badd 431 Gene3D G3DSA:3.90.600.10 331 423 1.3E-29 T 05-07-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AC028_RS08250 92bb43d35dcb6060bb7da58b67b7badd 431 SMART SM01210 330 423 2.2E-43 T 05-07-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AC028_RS08250 92bb43d35dcb6060bb7da58b67b7badd 431 SUPERFAMILY SSF51246 329 424 3.85E-27 T 05-07-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS08250 92bb43d35dcb6060bb7da58b67b7badd 431 SUPERFAMILY SSF52440 2 103 2.3E-35 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS08250 92bb43d35dcb6060bb7da58b67b7badd 431 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 42.175 T 05-07-2017 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AC028_RS08250 92bb43d35dcb6060bb7da58b67b7badd 431 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 05-07-2017 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AC028_RS08250 92bb43d35dcb6060bb7da58b67b7badd 431 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 3.3E-24 T 05-07-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AC028_RS08250 92bb43d35dcb6060bb7da58b67b7badd 431 SMART SM01209 103 296 5.2E-139 T 05-07-2017 AC028_RS08250 92bb43d35dcb6060bb7da58b67b7badd 431 Gene3D G3DSA:3.30.470.20 191 328 5.0E-62 T 05-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AC028_RS21615 572e06197369fe26c9cea4bc6a29c756 250 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 33 199 9.3E-42 T 05-07-2017 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21615 572e06197369fe26c9cea4bc6a29c756 250 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 8 207 33.329 T 05-07-2017 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21615 572e06197369fe26c9cea4bc6a29c756 250 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 160 181 - T 05-07-2017 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21615 572e06197369fe26c9cea4bc6a29c756 250 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 132 187 6.0E-27 T 05-07-2017 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21615 572e06197369fe26c9cea4bc6a29c756 250 SUPERFAMILY SSF143243 111 219 4.58E-54 T 05-07-2017 AC028_RS21615 572e06197369fe26c9cea4bc6a29c756 250 SUPERFAMILY SSF143243 8 67 4.58E-54 T 05-07-2017 AC028_RS04240 89bb4c5f28a9878d24a184b380c0f7ff 393 Gene3D G3DSA:3.30.565.10 261 334 7.7E-5 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS04240 89bb4c5f28a9878d24a184b380c0f7ff 393 Pfam PF07730 Histidine kinase 191 257 2.8E-18 T 05-07-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AC028_RS04240 89bb4c5f28a9878d24a184b380c0f7ff 393 SUPERFAMILY SSF55874 272 374 6.17E-11 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS07860 a009509cf41e1c60b27b7d5fd4dc432c 720 SUPERFAMILY SSF51445 508 585 9.72E-131 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS07860 a009509cf41e1c60b27b7d5fd4dc432c 720 SUPERFAMILY SSF51445 147 479 9.72E-131 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS07860 a009509cf41e1c60b27b7d5fd4dc432c 720 SUPERFAMILY SSF81296 15 160 8.4E-49 T 05-07-2017 IPR014756 Immunoglobulin E-set AC028_RS07860 a009509cf41e1c60b27b7d5fd4dc432c 720 Pfam PF00128 Alpha amylase, catalytic domain 200 308 1.4E-7 T 05-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AC028_RS07860 a009509cf41e1c60b27b7d5fd4dc432c 720 SMART SM00642 190 578 4.7E-6 T 05-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AC028_RS07860 a009509cf41e1c60b27b7d5fd4dc432c 720 Gene3D G3DSA:2.60.40.1180 598 701 2.4E-23 T 05-07-2017 IPR013780 Glycosyl hydrolase, all-beta AC028_RS07860 a009509cf41e1c60b27b7d5fd4dc432c 720 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 15 701 0.0 T 05-07-2017 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 AC028_RS07860 a009509cf41e1c60b27b7d5fd4dc432c 720 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 19 106 5.6E-21 T 05-07-2017 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 AC028_RS07860 a009509cf41e1c60b27b7d5fd4dc432c 720 Gene3D G3DSA:3.20.20.80 165 586 3.0E-119 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS07860 a009509cf41e1c60b27b7d5fd4dc432c 720 Gene3D G3DSA:2.60.40.10 15 164 3.7E-57 T 05-07-2017 IPR013783 Immunoglobulin-like fold AC028_RS07860 a009509cf41e1c60b27b7d5fd4dc432c 720 SUPERFAMILY SSF51011 598 701 1.29E-19 T 05-07-2017 AC028_RS08110 e7c609c3b13f31bb194ce6ae38ae177e 230 SMART SM00100 18 137 6.5E-22 T 05-07-2017 IPR000595 Cyclic nucleotide-binding domain AC028_RS08110 e7c609c3b13f31bb194ce6ae38ae177e 230 SMART SM00419 180 228 2.5E-12 T 05-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AC028_RS08110 e7c609c3b13f31bb194ce6ae38ae177e 230 Gene3D G3DSA:1.10.10.10 164 227 4.4E-19 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS08110 e7c609c3b13f31bb194ce6ae38ae177e 230 Pfam PF00325 Bacterial regulatory proteins, crp family 186 217 8.2E-14 T 05-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AC028_RS08110 e7c609c3b13f31bb194ce6ae38ae177e 230 SUPERFAMILY SSF46785 159 227 6.74E-13 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS08110 e7c609c3b13f31bb194ce6ae38ae177e 230 Gene3D G3DSA:2.60.120.10 21 163 2.4E-29 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS08110 e7c609c3b13f31bb194ce6ae38ae177e 230 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 186 202 2.5E-6 T 05-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AC028_RS08110 e7c609c3b13f31bb194ce6ae38ae177e 230 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 202 217 2.5E-6 T 05-07-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AC028_RS08110 e7c609c3b13f31bb194ce6ae38ae177e 230 Pfam PF00027 Cyclic nucleotide-binding domain 36 124 3.6E-19 T 05-07-2017 IPR000595 Cyclic nucleotide-binding domain AC028_RS08110 e7c609c3b13f31bb194ce6ae38ae177e 230 SUPERFAMILY SSF51206 24 155 2.23E-24 T 05-07-2017 IPR018490 Cyclic nucleotide-binding-like AC028_RS08110 e7c609c3b13f31bb194ce6ae38ae177e 230 ProSitePatterns PS00042 Crp-type HTH domain signature. 188 211 - T 05-07-2017 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AC028_RS07910 6190ae6a761f79e248d4648d6efef658 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 4.5E-12 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07910 6190ae6a761f79e248d4648d6efef658 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 4.5E-12 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07910 6190ae6a761f79e248d4648d6efef658 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 4.5E-12 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07910 6190ae6a761f79e248d4648d6efef658 268 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 179 0.0053 T 05-07-2017 AC028_RS07910 6190ae6a761f79e248d4648d6efef658 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.6E-28 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07910 6190ae6a761f79e248d4648d6efef658 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.6E-28 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07910 6190ae6a761f79e248d4648d6efef658 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.6E-28 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07910 6190ae6a761f79e248d4648d6efef658 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.6E-28 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07910 6190ae6a761f79e248d4648d6efef658 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.6E-28 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS07910 6190ae6a761f79e248d4648d6efef658 268 SUPERFAMILY SSF51735 4 257 9.63E-62 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS07910 6190ae6a761f79e248d4648d6efef658 268 Gene3D G3DSA:3.40.50.720 5 255 5.2E-66 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS07910 6190ae6a761f79e248d4648d6efef658 268 Pfam PF00106 short chain dehydrogenase 6 187 4.4E-50 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS15225 24c947e4260c1bc42547e00d02a6c959 467 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 5 466 1.4E-228 T 05-07-2017 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AC028_RS15225 24c947e4260c1bc42547e00d02a6c959 467 Gene3D G3DSA:2.60.120.10 354 466 1.9E-48 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS15225 24c947e4260c1bc42547e00d02a6c959 467 Pfam PF01050 Mannose-6-phosphate isomerase 312 462 1.6E-74 T 05-07-2017 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AC028_RS15225 24c947e4260c1bc42547e00d02a6c959 467 Pfam PF00483 Nucleotidyl transferase 6 285 6.1E-78 T 05-07-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AC028_RS15225 24c947e4260c1bc42547e00d02a6c959 467 SUPERFAMILY SSF53448 5 279 6.57E-73 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS15225 24c947e4260c1bc42547e00d02a6c959 467 Gene3D G3DSA:3.90.550.10 2 269 6.8E-106 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS15225 24c947e4260c1bc42547e00d02a6c959 467 SUPERFAMILY SSF51182 183 467 8.9E-90 T 05-07-2017 IPR011051 RmlC-like cupin domain AC028_RS19155 e04d6de67f946f2015d6fe0f3f8894c0 413 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 3.8E-139 T 05-07-2017 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AC028_RS19155 e04d6de67f946f2015d6fe0f3f8894c0 413 Pfam PF02687 FtsX-like permease family 274 406 8.8E-16 T 05-07-2017 IPR003838 ABC transporter permease protein domain GO:0016020 AC028_RS19155 e04d6de67f946f2015d6fe0f3f8894c0 413 Pfam PF12704 MacB-like periplasmic core domain 27 232 1.3E-16 T 05-07-2017 IPR025857 MacB-like periplasmic core domain AC028_RS12370 8b4ec39a9ad085dc34fc4e77b3c2c1c9 738 Gene3D G3DSA:2.170.130.10 32 171 8.0E-20 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS12370 8b4ec39a9ad085dc34fc4e77b3c2c1c9 738 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 162 7.2E-10 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS12370 8b4ec39a9ad085dc34fc4e77b3c2c1c9 738 SUPERFAMILY SSF56935 34 738 2.52E-94 T 05-07-2017 AC028_RS12370 8b4ec39a9ad085dc34fc4e77b3c2c1c9 738 Gene3D G3DSA:2.40.170.20 176 738 1.4E-74 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS04950 49a326af6d779f2fbf543648cd09caca 81 Pfam PF05488 PAAR motif 4 71 3.9E-25 T 05-07-2017 IPR008727 PAAR motif AC028_RS09115 fb2c06cadf068cd74789a7e8820ca268 208 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 161 18.94 T 05-07-2017 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AC028_RS09115 fb2c06cadf068cd74789a7e8820ca268 208 Pfam PF02416 mttA/Hcf106 family 4 34 3.6E-5 T 05-07-2017 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AC028_RS09115 fb2c06cadf068cd74789a7e8820ca268 208 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.3E-20 T 05-07-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AC028_RS09115 fb2c06cadf068cd74789a7e8820ca268 208 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.3E-20 T 05-07-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AC028_RS09115 fb2c06cadf068cd74789a7e8820ca268 208 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.3E-20 T 05-07-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AC028_RS09115 fb2c06cadf068cd74789a7e8820ca268 208 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 79 2.5E-26 T 05-07-2017 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AC028_RS01560 19d4563d24f951ca6bf8f6525c806899 397 Gene3D G3DSA:1.10.630.10 5 397 6.4E-107 T 05-07-2017 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AC028_RS01560 19d4563d24f951ca6bf8f6525c806899 397 SUPERFAMILY SSF48264 9 396 6.68E-86 T 05-07-2017 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AC028_RS01560 19d4563d24f951ca6bf8f6525c806899 397 PRINTS PR00359 B-class P450 signature 191 213 4.7E-39 T 05-07-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AC028_RS01560 19d4563d24f951ca6bf8f6525c806899 397 PRINTS PR00359 B-class P450 signature 347 358 4.7E-39 T 05-07-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AC028_RS01560 19d4563d24f951ca6bf8f6525c806899 397 PRINTS PR00359 B-class P450 signature 85 96 4.7E-39 T 05-07-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AC028_RS01560 19d4563d24f951ca6bf8f6525c806899 397 PRINTS PR00359 B-class P450 signature 131 147 4.7E-39 T 05-07-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AC028_RS01560 19d4563d24f951ca6bf8f6525c806899 397 PRINTS PR00359 B-class P450 signature 272 283 4.7E-39 T 05-07-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AC028_RS01560 19d4563d24f951ca6bf8f6525c806899 397 PRINTS PR00359 B-class P450 signature 338 347 4.7E-39 T 05-07-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AC028_RS01560 19d4563d24f951ca6bf8f6525c806899 397 PRINTS PR00359 B-class P450 signature 289 316 4.7E-39 T 05-07-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AC028_RS01560 19d4563d24f951ca6bf8f6525c806899 397 PRINTS PR00359 B-class P450 signature 317 332 4.7E-39 T 05-07-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AC028_RS01560 19d4563d24f951ca6bf8f6525c806899 397 Pfam PF00067 Cytochrome P450 175 367 4.3E-26 T 05-07-2017 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AC028_RS01560 19d4563d24f951ca6bf8f6525c806899 397 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 340 349 - T 05-07-2017 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 AC028_RS20925 f3770e92cbc0893d9833902cbe2c09ff 592 Pfam PF01019 Gamma-glutamyltranspeptidase 62 578 4.5E-166 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS20925 f3770e92cbc0893d9833902cbe2c09ff 592 SUPERFAMILY SSF56235 43 578 6.75E-166 T 05-07-2017 IPR029055 Nucleophile aminohydrolases, N-terminal AC028_RS20925 f3770e92cbc0893d9833902cbe2c09ff 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 259 275 7.4E-65 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS20925 f3770e92cbc0893d9833902cbe2c09ff 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 451 466 7.4E-65 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS20925 f3770e92cbc0893d9833902cbe2c09ff 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 474 491 7.4E-65 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS20925 f3770e92cbc0893d9833902cbe2c09ff 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 69 94 7.4E-65 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS20925 f3770e92cbc0893d9833902cbe2c09ff 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 161 180 7.4E-65 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS20925 f3770e92cbc0893d9833902cbe2c09ff 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 386 404 7.4E-65 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS20925 f3770e92cbc0893d9833902cbe2c09ff 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 410 428 7.4E-65 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS20925 f3770e92cbc0893d9833902cbe2c09ff 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 143 161 7.4E-65 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS20925 f3770e92cbc0893d9833902cbe2c09ff 592 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 289 308 7.4E-65 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS20925 f3770e92cbc0893d9833902cbe2c09ff 592 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 49 577 1.2E-139 T 05-07-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AC028_RS08235 0976f84707c376db340082d64a32ae9b 300 SUPERFAMILY SSF46785 3 85 1.5E-20 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS08235 0976f84707c376db340082d64a32ae9b 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.5E-20 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS08235 0976f84707c376db340082d64a32ae9b 300 Pfam PF03466 LysR substrate binding domain 89 289 1.1E-39 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS08235 0976f84707c376db340082d64a32ae9b 300 Gene3D G3DSA:3.40.190.10 89 181 1.6E-18 T 05-07-2017 AC028_RS08235 0976f84707c376db340082d64a32ae9b 300 Gene3D G3DSA:3.40.190.10 182 260 8.3E-23 T 05-07-2017 AC028_RS08235 0976f84707c376db340082d64a32ae9b 300 SUPERFAMILY SSF53850 90 293 4.15E-36 T 05-07-2017 AC028_RS08235 0976f84707c376db340082d64a32ae9b 300 Gene3D G3DSA:1.10.10.10 1 85 1.0E-26 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS08235 0976f84707c376db340082d64a32ae9b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.0E-7 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS08235 0976f84707c376db340082d64a32ae9b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.0E-7 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS08235 0976f84707c376db340082d64a32ae9b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.0E-7 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS13290 3cc300c9f27e890df6143028e6f521a3 175 SUPERFAMILY SSF54593 1 145 1.24E-22 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS13290 3cc300c9f27e890df6143028e6f521a3 175 Gene3D G3DSA:3.10.180.10 1 144 5.6E-28 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS13290 3cc300c9f27e890df6143028e6f521a3 175 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 140 8.6E-12 T 05-07-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AC028_RS01650 143116aafe1a380e6ab8310138384d3c 491 Gene3D G3DSA:3.40.50.300 4 239 1.0E-50 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01650 143116aafe1a380e6ab8310138384d3c 491 SUPERFAMILY SSF52317 253 445 1.64E-40 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS01650 143116aafe1a380e6ab8310138384d3c 491 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 7 230 5.5E-29 T 05-07-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AC028_RS01650 143116aafe1a380e6ab8310138384d3c 491 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 486 209.255 T 05-07-2017 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 AC028_RS01650 143116aafe1a380e6ab8310138384d3c 491 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 6 476 1.0E-139 T 05-07-2017 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 AC028_RS01650 143116aafe1a380e6ab8310138384d3c 491 Gene3D G3DSA:3.40.50.880 251 448 5.5E-32 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS01650 143116aafe1a380e6ab8310138384d3c 491 SUPERFAMILY SSF52540 1 242 2.03E-57 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01650 143116aafe1a380e6ab8310138384d3c 491 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 252 435 3.3E-56 T 05-07-2017 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 AC028_RS20685 a5a247f866bb22caf1eb709942aa798a 153 Pfam PF01814 Hemerythrin HHE cation binding domain 13 126 4.1E-14 T 05-07-2017 IPR012312 Haemerythrin-like Reactome: R-HSA-390471 AC028_RS20685 a5a247f866bb22caf1eb709942aa798a 153 SUPERFAMILY SSF47188 1 126 1.44E-34 T 05-07-2017 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AC028_RS20685 a5a247f866bb22caf1eb709942aa798a 153 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 6 126 1.5E-37 T 05-07-2017 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AC028_RS20685 a5a247f866bb22caf1eb709942aa798a 153 ProSitePatterns PS00550 Hemerythrin family signature. 57 80 - T 05-07-2017 IPR016131 Haemerythrin, iron-binding site GO:0046872 AC028_RS20685 a5a247f866bb22caf1eb709942aa798a 153 Gene3D G3DSA:1.20.120.50 1 126 3.6E-36 T 05-07-2017 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AC028_RS05725 3a1e3834460910a560b55e5ebe8b3351 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 05-07-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AC028_RS05725 3a1e3834460910a560b55e5ebe8b3351 387 Gene3D G3DSA:2.40.110.10 126 221 2.3E-41 T 05-07-2017 AC028_RS05725 3a1e3834460910a560b55e5ebe8b3351 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 05-07-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AC028_RS05725 3a1e3834460910a560b55e5ebe8b3351 387 Gene3D G3DSA:1.20.140.10 222 384 8.7E-66 T 05-07-2017 AC028_RS05725 3a1e3834460910a560b55e5ebe8b3351 387 SUPERFAMILY SSF56645 5 245 3.66E-82 T 05-07-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AC028_RS05725 3a1e3834460910a560b55e5ebe8b3351 387 Gene3D G3DSA:1.10.540.10 4 124 1.3E-37 T 05-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AC028_RS05725 3a1e3834460910a560b55e5ebe8b3351 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 222 6.9E-27 T 05-07-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AC028_RS05725 3a1e3834460910a560b55e5ebe8b3351 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 123 7.8E-33 T 05-07-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AC028_RS05725 3a1e3834460910a560b55e5ebe8b3351 387 SUPERFAMILY SSF47203 234 384 1.18E-46 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS05725 3a1e3834460910a560b55e5ebe8b3351 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 5.9E-43 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS08495 0b3ce67d62a9200c2dfe45c2efc89608 126 Gene3D G3DSA:3.30.10.10 70 122 2.1E-4 T 05-07-2017 AC028_RS08495 0b3ce67d62a9200c2dfe45c2efc89608 126 Pfam PF11720 Peptidase inhibitor I78 family 62 126 8.0E-24 T 05-07-2017 IPR021719 Proteinase inhibitor I78 AC028_RS21220 353b6f6664ad401367f5382ac42cd35b 153 Gene3D G3DSA:2.60.120.10 2 141 2.9E-46 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS21220 353b6f6664ad401367f5382ac42cd35b 153 SUPERFAMILY SSF51182 2 142 8.35E-48 T 05-07-2017 IPR011051 RmlC-like cupin domain AC028_RS21220 353b6f6664ad401367f5382ac42cd35b 153 Pfam PF06172 Cupin superfamily (DUF985) 7 136 4.5E-42 T 05-07-2017 IPR009327 Cupin domain of unknown function DUF985 AC028_RS06060 0f930001117b4846863c9d5dc7859ced 297 Pfam PF02219 Methylenetetrahydrofolate reductase 52 225 2.2E-8 T 05-07-2017 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AC028_RS06060 0f930001117b4846863c9d5dc7859ced 297 SUPERFAMILY SSF51730 20 281 6.08E-45 T 05-07-2017 IPR029041 FAD-linked oxidoreductase-like AC028_RS06060 0f930001117b4846863c9d5dc7859ced 297 Gene3D G3DSA:3.20.20.220 44 283 1.6E-37 T 05-07-2017 IPR029041 FAD-linked oxidoreductase-like AC028_RS10720 0d8f89cd947f30968101b945559e7763 134 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 125 3.3E-9 T 05-07-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AC028_RS10720 0d8f89cd947f30968101b945559e7763 134 Gene3D G3DSA:3.10.180.10 1 128 2.2E-30 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS10720 0d8f89cd947f30968101b945559e7763 134 SUPERFAMILY SSF54593 1 129 4.68E-22 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS11850 807ab8d1f7db2e5d4e866db22be3523f 340 Gene3D G3DSA:3.40.50.720 161 257 6.5E-20 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS11850 807ab8d1f7db2e5d4e866db22be3523f 340 SUPERFAMILY SSF51735 118 289 2.96E-35 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS11850 807ab8d1f7db2e5d4e866db22be3523f 340 SMART SM00829 16 337 8.8E-12 T 05-07-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AC028_RS11850 807ab8d1f7db2e5d4e866db22be3523f 340 SUPERFAMILY SSF50129 12 141 7.91E-31 T 05-07-2017 IPR011032 GroES-like AC028_RS11850 807ab8d1f7db2e5d4e866db22be3523f 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 90 1.6E-8 T 05-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AC028_RS11850 807ab8d1f7db2e5d4e866db22be3523f 340 Pfam PF13602 Zinc-binding dehydrogenase 195 337 3.9E-20 T 05-07-2017 AC028_RS11850 807ab8d1f7db2e5d4e866db22be3523f 340 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 340 4.3E-136 T 05-07-2017 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 AC028_RS11850 807ab8d1f7db2e5d4e866db22be3523f 340 Gene3D G3DSA:3.90.180.10 1 160 5.1E-35 T 05-07-2017 IPR011032 GroES-like AC028_RS02300 065f91480ee8e154c82c07230f6e83c8 207 SUPERFAMILY SSF56925 25 207 2.51E-23 T 05-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AC028_RS02300 065f91480ee8e154c82c07230f6e83c8 207 Pfam PF03922 OmpW family 26 207 3.9E-42 T 05-07-2017 IPR005618 Outer membrane protein, OmpW GO:0019867 AC028_RS02300 065f91480ee8e154c82c07230f6e83c8 207 Gene3D G3DSA:2.40.160.20 24 207 8.0E-54 T 05-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AC028_RS07490 31918e08b3888742a68d23a1442faf33 194 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 189 24.539 T 05-07-2017 IPR022929 Putative manganese efflux pump MntP AC028_RS07490 31918e08b3888742a68d23a1442faf33 194 Pfam PF02659 Putative manganese efflux pump 31 186 1.2E-49 T 05-07-2017 IPR003810 Putative manganese efflux pump AC028_RS17505 098b239433e6581917aaf49e74ebaab4 210 SUPERFAMILY SSF51569 10 208 1.23E-50 T 05-07-2017 AC028_RS17505 098b239433e6581917aaf49e74ebaab4 210 Gene3D G3DSA:3.20.20.70 13 208 4.1E-60 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS17505 098b239433e6581917aaf49e74ebaab4 210 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 126 139 - T 05-07-2017 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AC028_RS17505 098b239433e6581917aaf49e74ebaab4 210 Pfam PF01081 KDPG and KHG aldolase 13 183 5.7E-22 T 05-07-2017 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AC028_RS09610 2108486ccc3bf31ec91ba355568783a4 312 SUPERFAMILY SSF53474 43 302 2.73E-55 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS09610 2108486ccc3bf31ec91ba355568783a4 312 Gene3D G3DSA:3.40.50.1820 49 302 1.6E-69 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS09610 2108486ccc3bf31ec91ba355568783a4 312 Pfam PF00756 Putative esterase 60 217 1.4E-17 T 05-07-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 AC028_RS13190 a53608fa330a6c5f83d10b2ea1adaadb 449 SUPERFAMILY SSF49899 22 276 7.92E-66 T 05-07-2017 IPR013320 Concanavalin A-like lectin/glucanase domain AC028_RS13190 a53608fa330a6c5f83d10b2ea1adaadb 449 Pfam PF00722 Glycosyl hydrolases family 16 63 270 2.8E-22 T 05-07-2017 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 AC028_RS13190 a53608fa330a6c5f83d10b2ea1adaadb 449 Gene3D G3DSA:2.60.120.200 22 276 7.1E-69 T 05-07-2017 IPR013320 Concanavalin A-like lectin/glucanase domain AC028_RS13190 a53608fa330a6c5f83d10b2ea1adaadb 449 SUPERFAMILY SSF49785 313 447 1.57E-5 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS06105 4ee0135f28fa7c43c1a64ee8bf0b5869 292 Gene3D G3DSA:3.40.50.720 4 224 1.3E-37 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS06105 4ee0135f28fa7c43c1a64ee8bf0b5869 292 Pfam PF05368 NmrA-like family 8 227 8.4E-19 T 05-07-2017 IPR008030 NmrA-like domain Reactome: R-HSA-70635 AC028_RS06105 4ee0135f28fa7c43c1a64ee8bf0b5869 292 SUPERFAMILY SSF51735 6 257 6.0E-56 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS11885 f952001d421596027ef482921ff4afe8 338 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 17 334 8.5E-149 T 05-07-2017 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 AC028_RS11885 f952001d421596027ef482921ff4afe8 338 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 152 160 - T 05-07-2017 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 AC028_RS11885 f952001d421596027ef482921ff4afe8 338 Pfam PF13531 Bacterial extracellular solute-binding protein 46 287 8.1E-43 T 05-07-2017 AC028_RS11885 f952001d421596027ef482921ff4afe8 338 SUPERFAMILY SSF53850 29 334 1.02E-84 T 05-07-2017 AC028_RS11885 f952001d421596027ef482921ff4afe8 338 Gene3D G3DSA:3.40.190.10 27 168 1.8E-48 T 05-07-2017 AC028_RS11885 f952001d421596027ef482921ff4afe8 338 Gene3D G3DSA:3.40.190.10 189 295 9.5E-27 T 05-07-2017 AC028_RS03595 85895b22851055490cde6b668431595a 330 Pfam PF03524 Conjugal transfer protein 103 322 1.8E-64 T 05-07-2017 IPR010258 Conjugal transfer, TrbG/VirB9/CagX AC028_RS03595 85895b22851055490cde6b668431595a 330 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 104 311 4.1E-90 T 05-07-2017 IPR014142 P-type conjugative transfer protein TrbG AC028_RS18175 96f57eeb484c319437f5463689e490a9 253 Pfam PF13557 Putative MetA-pathway of phenol degradation 27 253 2.2E-18 T 05-07-2017 IPR025737 MetA-pathway of phenol degradation, putative AC028_RS16915 bf301ac11df6dbecc39d003b5f3ba896 269 Gene3D G3DSA:2.60.200.20 117 208 3.9E-17 T 05-07-2017 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AC028_RS16915 bf301ac11df6dbecc39d003b5f3ba896 269 SMART SM00240 137 187 5.5E-6 T 05-07-2017 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AC028_RS16915 bf301ac11df6dbecc39d003b5f3ba896 269 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 124 197 1.3E-15 T 05-07-2017 IPR032030 YscD, cytoplasmic domain AC028_RS16915 bf301ac11df6dbecc39d003b5f3ba896 269 SUPERFAMILY SSF49879 115 215 2.71E-16 T 05-07-2017 IPR008984 SMAD/FHA domain GO:0005515 AC028_RS21550 4ca9f12a57f1e0237b4a8f40d5fcab24 196 SUPERFAMILY SSF74942 90 159 3.27E-14 T 05-07-2017 IPR028998 Ribosome maturation factor RimP, C-terminal AC028_RS21550 4ca9f12a57f1e0237b4a8f40d5fcab24 196 Pfam PF02576 Putative ribosome maturation factor RimP 12 155 3.6E-47 T 05-07-2017 IPR003728 Ribosome maturation factor RimP GO:0042274 AC028_RS21550 4ca9f12a57f1e0237b4a8f40d5fcab24 196 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 159 24.524 T 05-07-2017 IPR003728 Ribosome maturation factor RimP GO:0042274 AC028_RS21550 4ca9f12a57f1e0237b4a8f40d5fcab24 196 Gene3D G3DSA:3.30.300.70 3 86 1.3E-26 T 05-07-2017 IPR028989 Ribosome maturation factor RimP, N-terminal AC028_RS21550 4ca9f12a57f1e0237b4a8f40d5fcab24 196 Gene3D G3DSA:2.30.30.180 94 156 5.1E-10 T 05-07-2017 IPR028998 Ribosome maturation factor RimP, C-terminal AC028_RS21550 4ca9f12a57f1e0237b4a8f40d5fcab24 196 SUPERFAMILY SSF75420 5 89 2.62E-21 T 05-07-2017 IPR028989 Ribosome maturation factor RimP, N-terminal AC028_RS07100 35a1d81823e65c6d78c1ead90e37ba92 121 Gene3D G3DSA:3.30.70.900 2 118 2.6E-29 T 05-07-2017 AC028_RS07100 35a1d81823e65c6d78c1ead90e37ba92 121 SUPERFAMILY SSF54909 34 103 4.47E-11 T 05-07-2017 IPR011008 Dimeric alpha-beta barrel AC028_RS07100 35a1d81823e65c6d78c1ead90e37ba92 121 Pfam PF07045 Domain of unknown function (DUF1330) 35 106 1.7E-6 T 05-07-2017 IPR010753 Domain of unknown function DUF1330 AC028_RS10370 d091784c6cf58c332a3bd51a523bea19 454 PIRSF PIRSF017901 2 454 7.6E-184 T 05-07-2017 AC028_RS10370 d091784c6cf58c332a3bd51a523bea19 454 SUPERFAMILY SSF55931 304 452 8.44E-70 T 05-07-2017 AC028_RS10370 d091784c6cf58c332a3bd51a523bea19 454 SUPERFAMILY SSF55931 25 265 8.44E-70 T 05-07-2017 AC028_RS10370 d091784c6cf58c332a3bd51a523bea19 454 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 59 357 2.6E-93 T 05-07-2017 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AC028_RS10370 d091784c6cf58c332a3bd51a523bea19 454 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 11 454 3.6E-209 T 05-07-2017 IPR011556 Glutamate--cysteine ligase, plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AC028_RS04235 d81562c8835058ffc39a3c87c659d617 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 194 2.4E-16 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS04235 d81562c8835058ffc39a3c87c659d617 200 SUPERFAMILY SSF46894 128 200 4.08E-19 T 05-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AC028_RS04235 d81562c8835058ffc39a3c87c659d617 200 SUPERFAMILY SSF52172 1 128 7.4E-32 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS04235 d81562c8835058ffc39a3c87c659d617 200 SMART SM00421 137 194 3.6E-19 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS04235 d81562c8835058ffc39a3c87c659d617 200 SMART SM00448 2 115 6.0E-29 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS04235 d81562c8835058ffc39a3c87c659d617 200 Pfam PF00072 Response regulator receiver domain 4 115 8.7E-25 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS04235 d81562c8835058ffc39a3c87c659d617 200 Gene3D G3DSA:1.10.10.10 145 200 1.7E-21 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS04235 d81562c8835058ffc39a3c87c659d617 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 6.7E-10 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS04235 d81562c8835058ffc39a3c87c659d617 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 6.7E-10 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS04235 d81562c8835058ffc39a3c87c659d617 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 6.7E-10 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS04235 d81562c8835058ffc39a3c87c659d617 200 Gene3D G3DSA:3.40.50.2300 1 144 5.7E-37 T 05-07-2017 AC028_RS19345 4fad6c567c3717e5fece5e12c6219240 997 Pfam PF13700 Domain of unknown function (DUF4158) 3 167 1.6E-29 T 05-07-2017 IPR025296 Domain of unknown function DUF4158 AC028_RS19345 4fad6c567c3717e5fece5e12c6219240 997 Pfam PF01526 Tn3 transposase DDE domain 588 974 1.3E-149 T 05-07-2017 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 AC028_RS05965 aaaf44dd17b4566ceec16a6014781e23 350 SUPERFAMILY SSF55961 139 342 3.85E-26 T 05-07-2017 AC028_RS05965 aaaf44dd17b4566ceec16a6014781e23 350 SUPERFAMILY SSF50022 20 132 7.99E-33 T 05-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AC028_RS05965 aaaf44dd17b4566ceec16a6014781e23 350 Gene3D G3DSA:2.102.10.10 24 134 1.6E-30 T 05-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AC028_RS05965 aaaf44dd17b4566ceec16a6014781e23 350 Pfam PF00355 Rieske [2Fe-2S] domain 25 105 9.1E-17 T 05-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AC028_RS16500 7928dea13fb895cece49cbf0d7747f24 249 Gene3D G3DSA:3.30.1330.30 2 77 7.2E-17 T 05-07-2017 IPR029064 50S ribosomal protein L30e-like AC028_RS16500 7928dea13fb895cece49cbf0d7747f24 249 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 5 247 39.624 T 05-07-2017 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AC028_RS16500 7928dea13fb895cece49cbf0d7747f24 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 81 5.0E-13 T 05-07-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AC028_RS16500 7928dea13fb895cece49cbf0d7747f24 249 SUPERFAMILY SSF75217 72 247 9.81E-47 T 05-07-2017 IPR029028 Alpha/beta knot methyltransferases AC028_RS16500 7928dea13fb895cece49cbf0d7747f24 249 Gene3D G3DSA:3.40.1280.10 97 247 1.2E-53 T 05-07-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AC028_RS16500 7928dea13fb895cece49cbf0d7747f24 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 6 246 5.3E-71 T 05-07-2017 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 AC028_RS16500 7928dea13fb895cece49cbf0d7747f24 249 Pfam PF00588 SpoU rRNA Methylase family 100 239 5.7E-39 T 05-07-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AC028_RS16500 7928dea13fb895cece49cbf0d7747f24 249 SMART SM00967 7 83 4.5E-11 T 05-07-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AC028_RS16500 7928dea13fb895cece49cbf0d7747f24 249 SUPERFAMILY SSF55315 2 76 3.88E-14 T 05-07-2017 IPR029064 50S ribosomal protein L30e-like AC028_RS09800 9ad55e064368a015ab496add6018709b 645 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 6 645 48.902 T 05-07-2017 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 AC028_RS09800 9ad55e064368a015ab496add6018709b 645 SUPERFAMILY SSF53448 143 436 1.07E-23 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS09800 9ad55e064368a015ab496add6018709b 645 Pfam PF13632 Glycosyl transferase family group 2 242 465 4.6E-15 T 05-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AC028_RS05120 80fcd0d6013caf842f9bfe726bd455db 339 Gene3D G3DSA:3.40.50.1820 63 315 4.7E-69 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS05120 80fcd0d6013caf842f9bfe726bd455db 339 SUPERFAMILY SSF53474 71 328 7.56E-43 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS05120 80fcd0d6013caf842f9bfe726bd455db 339 Pfam PF07859 alpha/beta hydrolase fold 92 293 4.8E-16 T 05-07-2017 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AC028_RS22030 49ca8f72d27fdeac17238cb81f13a4be 289 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 69 283 27.294 T 05-07-2017 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 AC028_RS22030 49ca8f72d27fdeac17238cb81f13a4be 289 SUPERFAMILY SSF52374 72 285 1.77E-46 T 05-07-2017 AC028_RS22030 49ca8f72d27fdeac17238cb81f13a4be 289 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 73 130 8.2E-9 T 05-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AC028_RS22030 49ca8f72d27fdeac17238cb81f13a4be 289 Gene3D G3DSA:3.40.50.620 72 284 4.5E-56 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS22030 49ca8f72d27fdeac17238cb81f13a4be 289 Pfam PF01467 Cytidylyltransferase-like 73 256 2.5E-25 T 05-07-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AC028_RS22030 49ca8f72d27fdeac17238cb81f13a4be 289 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 74 282 8.6E-43 T 05-07-2017 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 AC028_RS04910 7b0620e103856be43f873c2d702b8f32 426 Gene3D G3DSA:3.30.1330.60 303 422 3.1E-26 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS04910 7b0620e103856be43f873c2d702b8f32 426 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 47 255 5.9E-72 T 05-07-2017 IPR017732 Type IV / VI secretion system, DotU AC028_RS04910 7b0620e103856be43f873c2d702b8f32 426 Pfam PF09850 Type VI secretion system protein DotU 48 248 6.5E-67 T 05-07-2017 IPR017732 Type IV / VI secretion system, DotU AC028_RS04910 7b0620e103856be43f873c2d702b8f32 426 SUPERFAMILY SSF103088 306 423 3.14E-24 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS04910 7b0620e103856be43f873c2d702b8f32 426 Pfam PF00691 OmpA family 317 415 1.0E-12 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS04910 7b0620e103856be43f873c2d702b8f32 426 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 284 421 1.6E-43 T 05-07-2017 IPR017733 Type VI secretion system peptidoglycan-associated domain AC028_RS06665 9768cd7a7a7e363b5d7c3e16d8a2c99f 405 SUPERFAMILY SSF56024 220 390 1.01E-37 T 05-07-2017 AC028_RS06665 9768cd7a7a7e363b5d7c3e16d8a2c99f 405 Gene3D G3DSA:3.30.870.10 240 382 5.8E-36 T 05-07-2017 AC028_RS06665 9768cd7a7a7e363b5d7c3e16d8a2c99f 405 SMART SM00155 318 345 0.0022 T 05-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AC028_RS06665 9768cd7a7a7e363b5d7c3e16d8a2c99f 405 SMART SM00155 141 168 8.1 T 05-07-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AC028_RS06665 9768cd7a7a7e363b5d7c3e16d8a2c99f 405 SUPERFAMILY SSF56024 21 233 9.42E-47 T 05-07-2017 AC028_RS06665 9768cd7a7a7e363b5d7c3e16d8a2c99f 405 Gene3D G3DSA:3.30.870.10 40 232 3.2E-47 T 05-07-2017 AC028_RS06665 9768cd7a7a7e363b5d7c3e16d8a2c99f 405 Pfam PF13091 PLD-like domain 247 372 8.2E-28 T 05-07-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 AC028_RS06665 9768cd7a7a7e363b5d7c3e16d8a2c99f 405 Pfam PF13091 PLD-like domain 60 201 1.7E-12 T 05-07-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 AC028_RS05415 4069cda28b69723370ca31b2823191a3 259 Pfam PF02602 Uroporphyrinogen-III synthase HemD 25 234 4.5E-22 T 05-07-2017 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS05415 4069cda28b69723370ca31b2823191a3 259 Gene3D G3DSA:3.40.50.10090 17 122 3.0E-10 T 05-07-2017 AC028_RS05415 4069cda28b69723370ca31b2823191a3 259 SUPERFAMILY SSF69618 11 249 3.27E-43 T 05-07-2017 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS12650 af486ded09a211d7afe99e4a280b8bf3 765 Gene3D G3DSA:3.30.365.10 196 301 6.5E-30 T 05-07-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AC028_RS12650 af486ded09a211d7afe99e4a280b8bf3 765 SUPERFAMILY SSF54665 23 160 1.06E-37 T 05-07-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AC028_RS12650 af486ded09a211d7afe99e4a280b8bf3 765 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 183 705 1.0E-107 T 05-07-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AC028_RS12650 af486ded09a211d7afe99e4a280b8bf3 765 SUPERFAMILY SSF56003 177 763 1.31E-153 T 05-07-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AC028_RS12650 af486ded09a211d7afe99e4a280b8bf3 765 Gene3D G3DSA:3.30.365.10 376 459 6.4E-55 T 05-07-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AC028_RS12650 af486ded09a211d7afe99e4a280b8bf3 765 Gene3D G3DSA:3.30.365.10 622 763 6.4E-55 T 05-07-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AC028_RS12650 af486ded09a211d7afe99e4a280b8bf3 765 Gene3D G3DSA:3.30.365.10 460 603 2.3E-30 T 05-07-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AC028_RS12650 af486ded09a211d7afe99e4a280b8bf3 765 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 41 151 6.2E-22 T 05-07-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AC028_RS12650 af486ded09a211d7afe99e4a280b8bf3 765 Gene3D G3DSA:3.90.1170.50 23 141 2.8E-33 T 05-07-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AC028_RS12650 af486ded09a211d7afe99e4a280b8bf3 765 SMART SM01008 41 155 3.9E-38 T 05-07-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AC028_RS12650 af486ded09a211d7afe99e4a280b8bf3 765 Gene3D G3DSA:3.30.365.10 303 332 3.2E-7 T 05-07-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AC028_RS12650 af486ded09a211d7afe99e4a280b8bf3 765 Gene3D G3DSA:3.30.365.10 142 195 3.2E-7 T 05-07-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AC028_RS22025 60839c785d1946bbf0113bca262b914c 137 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 23 120 2.0E-37 T 05-07-2017 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AC028_RS22025 60839c785d1946bbf0113bca262b914c 137 Pfam PF02410 Ribosomal silencing factor during starvation 26 120 6.0E-29 T 05-07-2017 AC028_RS22025 60839c785d1946bbf0113bca262b914c 137 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 19 121 25.088 T 05-07-2017 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AC028_RS22025 60839c785d1946bbf0113bca262b914c 137 SUPERFAMILY SSF81301 21 126 8.99E-39 T 05-07-2017 AC028_RS22025 60839c785d1946bbf0113bca262b914c 137 Gene3D G3DSA:3.30.460.10 22 121 1.3E-37 T 05-07-2017 AC028_RS04220 1cbe59a1629d2101243bb413ea0ff25c 363 SUPERFAMILY SSF56634 32 344 6.94E-88 T 05-07-2017 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS04220 1cbe59a1629d2101243bb413ea0ff25c 363 Gene3D G3DSA:2.40.180.10 45 348 1.4E-71 T 05-07-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS04220 1cbe59a1629d2101243bb413ea0ff25c 363 SMART SM01060 23 359 2.9E-6 T 05-07-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS04220 1cbe59a1629d2101243bb413ea0ff25c 363 Pfam PF00199 Catalase 64 340 5.5E-24 T 05-07-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS04220 1cbe59a1629d2101243bb413ea0ff25c 363 PIRSF PIRSF000296 15 348 2.6E-111 T 05-07-2017 IPR024168 Catalase, SrpA-type, predicted AC028_RS08155 188f0fddc0dd79bc9ff1e4db8782c398 69 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 50 2.8E-13 T 05-07-2017 IPR007419 BFD-like [2Fe-2S]-binding domain AC028_RS00840 8ec5c0e3f1b0078ebf4b5549fa69fcd8 220 Gene3D G3DSA:2.40.128.110 26 195 2.3E-51 T 05-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AC028_RS00840 8ec5c0e3f1b0078ebf4b5549fa69fcd8 220 Pfam PF04264 YceI-like domain 27 190 1.0E-36 T 05-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AC028_RS00840 8ec5c0e3f1b0078ebf4b5549fa69fcd8 220 SUPERFAMILY SSF101874 24 192 1.7E-46 T 05-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AC028_RS00840 8ec5c0e3f1b0078ebf4b5549fa69fcd8 220 SMART SM00867 26 191 2.1E-51 T 05-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AC028_RS21450 81ffcf0426bbed6625843e72a93d8609 159 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 10 33 4.5E-7 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS21450 81ffcf0426bbed6625843e72a93d8609 159 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 13 137 1.2E-28 T 05-07-2017 IPR013362 Pilus modification type IV, PilV AC028_RS21450 81ffcf0426bbed6625843e72a93d8609 159 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 32 5.4E-6 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS11805 7f94b48eaf3bf9791aa76c01779637b9 509 SUPERFAMILY SSF75304 2 477 1.31E-123 T 05-07-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AC028_RS11805 7f94b48eaf3bf9791aa76c01779637b9 509 Pfam PF01425 Amidase 18 462 5.1E-100 T 05-07-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AC028_RS11805 7f94b48eaf3bf9791aa76c01779637b9 509 Gene3D G3DSA:3.90.1300.10 2 478 2.3E-149 T 05-07-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AC028_RS18935 7137ba98d0934297833b6a2ea4fbfc2a 169 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 17 114 4.2E-28 T 05-07-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 AC028_RS18935 7137ba98d0934297833b6a2ea4fbfc2a 169 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 19 162 47.711 T 05-07-2017 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AC028_RS18935 7137ba98d0934297833b6a2ea4fbfc2a 169 SUPERFAMILY SSF53927 12 162 1.19E-55 T 05-07-2017 IPR016193 Cytidine deaminase-like GO:0003824 AC028_RS18935 7137ba98d0934297833b6a2ea4fbfc2a 169 Gene3D G3DSA:3.40.140.10 8 159 2.3E-56 T 05-07-2017 AC028_RS18935 7137ba98d0934297833b6a2ea4fbfc2a 169 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 66 103 - T 05-07-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AC028_RS14560 bc8749707ca5a2f1ab844bed14ae4a3a 253 PIRSF PIRSF006648 7 252 8.5E-27 T 05-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AC028_RS14560 bc8749707ca5a2f1ab844bed14ae4a3a 253 Pfam PF01061 ABC-2 type transporter 6 216 6.1E-33 T 05-07-2017 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AC028_RS14560 bc8749707ca5a2f1ab844bed14ae4a3a 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 193 212 1.5E-14 T 05-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AC028_RS14560 bc8749707ca5a2f1ab844bed14ae4a3a 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 55 77 1.5E-14 T 05-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AC028_RS14560 bc8749707ca5a2f1ab844bed14ae4a3a 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 136 160 1.5E-14 T 05-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AC028_RS14560 bc8749707ca5a2f1ab844bed14ae4a3a 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 99 124 1.5E-14 T 05-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AC028_RS14560 bc8749707ca5a2f1ab844bed14ae4a3a 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 173 192 1.5E-14 T 05-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AC028_RS18225 c62c68ac6d1655cc8036731b767a24da 424 SMART SM00260 285 423 9.6E-23 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS18225 c62c68ac6d1655cc8036731b767a24da 424 Pfam PF01584 CheW-like domain 291 423 2.8E-30 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS18225 c62c68ac6d1655cc8036731b767a24da 424 SUPERFAMILY SSF50341 287 424 7.19E-31 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS18225 c62c68ac6d1655cc8036731b767a24da 424 Gene3D G3DSA:2.40.50.180 328 364 1.0E-7 T 05-07-2017 AC028_RS18225 c62c68ac6d1655cc8036731b767a24da 424 Gene3D G3DSA:2.30.30.40 365 417 3.7E-6 T 05-07-2017 AC028_RS20375 f0eb82d7e97eaf949c48d3de6d122ce7 311 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 18 280 3.0E-101 T 05-07-2017 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 AC028_RS20375 f0eb82d7e97eaf949c48d3de6d122ce7 311 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 135 245 4.1E-21 T 05-07-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AC028_RS20375 f0eb82d7e97eaf949c48d3de6d122ce7 311 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 21 120 2.5E-24 T 05-07-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AC028_RS20375 f0eb82d7e97eaf949c48d3de6d122ce7 311 SUPERFAMILY SSF52374 18 291 2.95E-80 T 05-07-2017 AC028_RS20375 f0eb82d7e97eaf949c48d3de6d122ce7 311 Gene3D G3DSA:3.40.50.620 19 83 4.0E-40 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS20375 f0eb82d7e97eaf949c48d3de6d122ce7 311 Gene3D G3DSA:3.40.50.620 182 231 4.0E-40 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS20375 f0eb82d7e97eaf949c48d3de6d122ce7 311 Gene3D G3DSA:3.90.800.10 84 180 1.9E-13 T 05-07-2017 AC028_RS20375 f0eb82d7e97eaf949c48d3de6d122ce7 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 204 4.8E-13 T 05-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AC028_RS20375 f0eb82d7e97eaf949c48d3de6d122ce7 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 180 190 4.8E-13 T 05-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AC028_RS20375 f0eb82d7e97eaf949c48d3de6d122ce7 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 33 4.8E-13 T 05-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AC028_RS20375 f0eb82d7e97eaf949c48d3de6d122ce7 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 50 63 4.8E-13 T 05-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AC028_RS20375 f0eb82d7e97eaf949c48d3de6d122ce7 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 46 4.8E-13 T 05-07-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AC028_RS20375 f0eb82d7e97eaf949c48d3de6d122ce7 311 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 18 300 41.05 T 05-07-2017 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 AC028_RS18430 ea83fc31dbcb73688d877d3240c2f991 458 SMART SM00382 175 359 1.0E-7 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS18430 ea83fc31dbcb73688d877d3240c2f991 458 SUPERFAMILY SSF52540 111 379 7.55E-92 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18430 ea83fc31dbcb73688d877d3240c2f991 458 Gene3D G3DSA:3.40.50.300 111 376 2.0E-87 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18430 ea83fc31dbcb73688d877d3240c2f991 458 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 36 454 2.7E-166 T 05-07-2017 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AC028_RS18430 ea83fc31dbcb73688d877d3240c2f991 458 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 163 374 1.7E-71 T 05-07-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AC028_RS14005 77e02a42dd32b14e85598cd603cca6f9 378 SUPERFAMILY SSF54106 30 78 1.11E-7 T 05-07-2017 IPR018392 LysM domain AC028_RS14005 77e02a42dd32b14e85598cd603cca6f9 378 Pfam PF01476 LysM domain 32 77 1.2E-13 T 05-07-2017 IPR018392 LysM domain AC028_RS14005 77e02a42dd32b14e85598cd603cca6f9 378 SMART SM00257 31 79 1.7E-6 T 05-07-2017 IPR018392 LysM domain AC028_RS14005 77e02a42dd32b14e85598cd603cca6f9 378 Gene3D G3DSA:3.10.350.10 30 78 5.3E-9 T 05-07-2017 IPR018392 LysM domain AC028_RS20160 d8c54bda9e670b63aee85c03a36ee28b 416 SUPERFAMILY SSF103473 22 414 1.57E-36 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS20160 d8c54bda9e670b63aee85c03a36ee28b 416 Pfam PF05977 Transmembrane secretion effector 20 410 8.6E-33 T 05-07-2017 IPR010290 Transmembrane secretion effector AC028_RS20160 d8c54bda9e670b63aee85c03a36ee28b 416 Gene3D G3DSA:1.20.1250.20 19 205 1.7E-15 T 05-07-2017 AC028_RS20160 d8c54bda9e670b63aee85c03a36ee28b 416 Gene3D G3DSA:1.20.1250.20 232 402 7.4E-13 T 05-07-2017 AC028_RS21705 a6553a61ad6d87ca63a60869922f1a65 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.5E-7 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS21705 a6553a61ad6d87ca63a60869922f1a65 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.5E-7 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS21705 a6553a61ad6d87ca63a60869922f1a65 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.5E-7 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS21705 a6553a61ad6d87ca63a60869922f1a65 308 Gene3D G3DSA:1.10.10.10 6 83 6.5E-23 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS21705 a6553a61ad6d87ca63a60869922f1a65 308 SUPERFAMILY SSF53850 95 297 9.77E-26 T 05-07-2017 AC028_RS21705 a6553a61ad6d87ca63a60869922f1a65 308 Pfam PF03466 LysR substrate binding domain 95 293 8.6E-22 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS21705 a6553a61ad6d87ca63a60869922f1a65 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 8.9E-19 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS21705 a6553a61ad6d87ca63a60869922f1a65 308 Gene3D G3DSA:3.40.190.10 164 264 7.8E-30 T 05-07-2017 AC028_RS21705 a6553a61ad6d87ca63a60869922f1a65 308 SUPERFAMILY SSF46785 5 85 4.67E-20 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS14440 27491f5033648d4fdde12ed003bcbe32 168 Pfam PF05974 Domain of unknown function (DUF892) 5 161 3.0E-61 T 05-07-2017 IPR010287 Domain of unknown function DUF892 AC028_RS14440 27491f5033648d4fdde12ed003bcbe32 168 SUPERFAMILY SSF47240 1 154 8.62E-57 T 05-07-2017 IPR009078 Ferritin-like superfamily AC028_RS14440 27491f5033648d4fdde12ed003bcbe32 168 Gene3D G3DSA:1.20.1260.10 1 162 1.3E-69 T 05-07-2017 IPR012347 Ferritin-related AC028_RS15635 87d3763559bfda813c31eed8ca29128b 716 Pfam PF01432 Peptidase family M3 244 698 1.4E-131 T 05-07-2017 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 AC028_RS15635 87d3763559bfda813c31eed8ca29128b 716 SUPERFAMILY SSF55486 27 698 6.52E-176 T 05-07-2017 AC028_RS15635 87d3763559bfda813c31eed8ca29128b 716 Gene3D G3DSA:3.40.390.10 381 523 8.0E-48 T 05-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AC028_RS15635 87d3763559bfda813c31eed8ca29128b 716 Gene3D G3DSA:1.20.1050.40 27 159 5.1E-16 T 05-07-2017 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal AC028_RS15635 87d3763559bfda813c31eed8ca29128b 716 Gene3D G3DSA:1.10.1370.10 161 371 5.6E-118 T 05-07-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AC028_RS15635 87d3763559bfda813c31eed8ca29128b 716 Gene3D G3DSA:1.10.1370.10 524 701 5.6E-118 T 05-07-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AC028_RS11100 3888982740e1aa9411254a3c2c069364 302 Pfam PF00850 Histone deacetylase domain 18 301 8.6E-76 T 05-07-2017 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AC028_RS11100 3888982740e1aa9411254a3c2c069364 302 SUPERFAMILY SSF52768 1 301 6.71E-96 T 05-07-2017 AC028_RS11100 3888982740e1aa9411254a3c2c069364 302 Gene3D G3DSA:3.40.800.20 2 301 1.6E-95 T 05-07-2017 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AC028_RS11100 3888982740e1aa9411254a3c2c069364 302 PRINTS PR01270 Histone deacetylase superfamily signature 231 241 4.2E-16 T 05-07-2017 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AC028_RS11100 3888982740e1aa9411254a3c2c069364 302 PRINTS PR01270 Histone deacetylase superfamily signature 151 166 4.2E-16 T 05-07-2017 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AC028_RS11100 3888982740e1aa9411254a3c2c069364 302 PRINTS PR01270 Histone deacetylase superfamily signature 117 140 4.2E-16 T 05-07-2017 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AC028_RS13200 e9556a8b4750684bb9656fddbff648af 349 SUPERFAMILY SSF74650 3 331 2.7E-94 T 05-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AC028_RS13200 e9556a8b4750684bb9656fddbff648af 349 Gene3D G3DSA:2.70.98.10 2 332 7.4E-103 T 05-07-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 AC028_RS13200 e9556a8b4750684bb9656fddbff648af 349 Pfam PF01263 Aldose 1-epimerase 16 330 5.9E-76 T 05-07-2017 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AC028_RS13200 e9556a8b4750684bb9656fddbff648af 349 PIRSF PIRSF005096 1 334 6.1E-98 T 05-07-2017 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 AC028_RS06255 2f9a694f053dc182143be9fca313d192 244 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 27 244 1.5E-95 T 05-07-2017 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 AC028_RS06255 2f9a694f053dc182143be9fca313d192 244 SUPERFAMILY SSF49482 24 243 3.14E-72 T 05-07-2017 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AC028_RS06255 2f9a694f053dc182143be9fca313d192 244 Pfam PF00775 Dioxygenase 67 237 3.3E-53 T 05-07-2017 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AC028_RS06255 2f9a694f053dc182143be9fca313d192 244 Gene3D G3DSA:2.60.130.10 26 243 2.4E-74 T 05-07-2017 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AC028_RS06255 2f9a694f053dc182143be9fca313d192 244 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 18 52 6.7E-8 T 05-07-2017 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 AC028_RS06255 2f9a694f053dc182143be9fca313d192 244 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 88 116 - T 05-07-2017 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AC028_RS03705 d61ddcc99ac5e52f04a7fe445fe39f28 64 Pfam PF09791 Oxidoreductase-like protein, N-terminal 14 52 1.6E-13 T 05-07-2017 IPR019180 Oxidoreductase-like, N-terminal AC028_RS18055 e160f339351cdeff7c0abebe3ad6c3c5 136 Pfam PF01850 PIN domain 3 121 1.2E-7 T 05-07-2017 IPR002716 PIN domain AC028_RS18055 e160f339351cdeff7c0abebe3ad6c3c5 136 SUPERFAMILY SSF88723 1 122 4.77E-13 T 05-07-2017 IPR029060 PIN domain-like AC028_RS18055 e160f339351cdeff7c0abebe3ad6c3c5 136 Gene3D G3DSA:3.40.50.1010 1 132 1.3E-5 T 05-07-2017 IPR029060 PIN domain-like AC028_RS19375 5c5efd3ea02926f7ddb1981a62e208e0 79 Gene3D G3DSA:3.50.50.60 3 72 3.7E-10 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19375 5c5efd3ea02926f7ddb1981a62e208e0 79 SUPERFAMILY SSF51905 4 76 5.18E-14 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS19375 5c5efd3ea02926f7ddb1981a62e208e0 79 Pfam PF01494 FAD binding domain 4 72 3.6E-6 T 05-07-2017 IPR002938 FAD-binding domain GO:0071949 AC028_RS04790 8eb8320f7c9334ba6c4d6f3af7be78e2 249 SUPERFAMILY SSF69593 11 245 1.44E-55 T 05-07-2017 AC028_RS04790 8eb8320f7c9334ba6c4d6f3af7be78e2 249 SMART SM00563 81 195 1.6E-38 T 05-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AC028_RS04790 8eb8320f7c9334ba6c4d6f3af7be78e2 249 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 65 192 7.5E-35 T 05-07-2017 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 AC028_RS04790 8eb8320f7c9334ba6c4d6f3af7be78e2 249 Pfam PF01553 Acyltransferase 67 192 2.7E-29 T 05-07-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AC028_RS04790 8eb8320f7c9334ba6c4d6f3af7be78e2 249 Gene3D G3DSA:3.40.1130.10 69 242 1.1E-24 T 05-07-2017 AC028_RS01180 fa40a1ef00c68d4f100555d912761ccb 120 Pfam PF00072 Response regulator receiver domain 4 116 3.5E-26 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS01180 fa40a1ef00c68d4f100555d912761ccb 120 SUPERFAMILY SSF52172 1 120 4.7E-37 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS01180 fa40a1ef00c68d4f100555d912761ccb 120 SMART SM00448 2 115 1.8E-36 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS01180 fa40a1ef00c68d4f100555d912761ccb 120 Gene3D G3DSA:3.40.50.2300 1 120 1.0E-38 T 05-07-2017 AC028_RS03710 8aa5005610c6d852ac1a7bbb0e7a795b 203 SUPERFAMILY SSF109604 15 186 2.35E-12 T 05-07-2017 AC028_RS03710 8aa5005610c6d852ac1a7bbb0e7a795b 203 PIRSF PIRSF035170 4 203 5.9E-71 T 05-07-2017 IPR009218 Predicted HD phosphohydrolase AC028_RS07975 8c88ef0ef99186637014ce08d7cf6a79 437 Pfam PF04209 homogentisate 1,2-dioxygenase 6 428 2.6E-205 T 05-07-2017 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 AC028_RS07975 8c88ef0ef99186637014ce08d7cf6a79 437 Gene3D G3DSA:2.60.120.10 194 219 2.8E-69 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS07975 8c88ef0ef99186637014ce08d7cf6a79 437 Gene3D G3DSA:2.60.120.10 280 398 2.8E-69 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS07975 8c88ef0ef99186637014ce08d7cf6a79 437 SUPERFAMILY SSF51182 5 431 1.96E-173 T 05-07-2017 IPR011051 RmlC-like cupin domain AC028_RS07975 8c88ef0ef99186637014ce08d7cf6a79 437 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 5 428 3.9E-203 T 05-07-2017 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 AC028_RS07975 8c88ef0ef99186637014ce08d7cf6a79 437 Hamap MF_00334 Homogentisate 1,2-dioxygenase [hmgA]. 6 430 71.188 T 05-07-2017 IPR022950 Homogentisate 1,2-dioxygenase, bacterial GO:0004411|GO:0006559|GO:0006572|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5 AC028_RS05200 77799d56b615b4199af47b2708899ac6 731 Gene3D G3DSA:2.170.130.10 33 168 1.5E-29 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS05200 77799d56b615b4199af47b2708899ac6 731 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 728 2.7E-87 T 05-07-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AC028_RS05200 77799d56b615b4199af47b2708899ac6 731 Pfam PF00593 TonB dependent receptor 485 730 1.9E-28 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS05200 77799d56b615b4199af47b2708899ac6 731 Gene3D G3DSA:2.40.170.20 176 731 3.4E-118 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS05200 77799d56b615b4199af47b2708899ac6 731 SUPERFAMILY SSF56935 31 731 5.49E-112 T 05-07-2017 AC028_RS05200 77799d56b615b4199af47b2708899ac6 731 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 157 1.7E-11 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS03075 69b8becd3c62b57c31a57c14117ceeea 390 PRINTS PR00735 Glycosyl hydrolase family 8 signature 255 264 7.1E-16 T 05-07-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AC028_RS03075 69b8becd3c62b57c31a57c14117ceeea 390 PRINTS PR00735 Glycosyl hydrolase family 8 signature 231 242 7.1E-16 T 05-07-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AC028_RS03075 69b8becd3c62b57c31a57c14117ceeea 390 PRINTS PR00735 Glycosyl hydrolase family 8 signature 193 210 7.1E-16 T 05-07-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AC028_RS03075 69b8becd3c62b57c31a57c14117ceeea 390 PRINTS PR00735 Glycosyl hydrolase family 8 signature 66 79 7.1E-16 T 05-07-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AC028_RS03075 69b8becd3c62b57c31a57c14117ceeea 390 PRINTS PR00735 Glycosyl hydrolase family 8 signature 352 366 7.1E-16 T 05-07-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AC028_RS03075 69b8becd3c62b57c31a57c14117ceeea 390 PRINTS PR00735 Glycosyl hydrolase family 8 signature 128 146 7.1E-16 T 05-07-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AC028_RS03075 69b8becd3c62b57c31a57c14117ceeea 390 Gene3D G3DSA:1.50.10.10 21 375 2.4E-86 T 05-07-2017 IPR012341 Six-hairpin glycosidase GO:0003824 AC028_RS03075 69b8becd3c62b57c31a57c14117ceeea 390 Pfam PF01270 Glycosyl hydrolases family 8 20 364 7.0E-59 T 05-07-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 AC028_RS03075 69b8becd3c62b57c31a57c14117ceeea 390 SUPERFAMILY SSF48208 21 372 2.48E-90 T 05-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AC028_RS21685 0542d9c5b12aeb71f6818fc759e93d16 295 SUPERFAMILY SSF52096 28 288 2.15E-85 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS21685 0542d9c5b12aeb71f6818fc759e93d16 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 255 264 4.9E-42 T 05-07-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AC028_RS21685 0542d9c5b12aeb71f6818fc759e93d16 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 204 221 4.9E-42 T 05-07-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AC028_RS21685 0542d9c5b12aeb71f6818fc759e93d16 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 133 147 4.9E-42 T 05-07-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AC028_RS21685 0542d9c5b12aeb71f6818fc759e93d16 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 233 244 4.9E-42 T 05-07-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AC028_RS21685 0542d9c5b12aeb71f6818fc759e93d16 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 167 185 4.9E-42 T 05-07-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AC028_RS21685 0542d9c5b12aeb71f6818fc759e93d16 295 Pfam PF01039 Carboxyl transferase domain 110 243 5.0E-17 T 05-07-2017 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS21685 0542d9c5b12aeb71f6818fc759e93d16 295 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 287 8.6E-127 T 05-07-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AC028_RS21685 0542d9c5b12aeb71f6818fc759e93d16 295 Gene3D G3DSA:3.90.226.10 21 288 1.0E-74 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS21685 0542d9c5b12aeb71f6818fc759e93d16 295 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 285 37.903 T 05-07-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 AC028_RS01320 4cc80dd3055b301e621b861396730ea9 134 SMART SM00448 8 119 1.0E-10 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS01320 4cc80dd3055b301e621b861396730ea9 134 SUPERFAMILY SSF52172 8 129 2.28E-22 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS01320 4cc80dd3055b301e621b861396730ea9 134 Pfam PF00072 Response regulator receiver domain 10 120 5.7E-12 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS01320 4cc80dd3055b301e621b861396730ea9 134 Gene3D G3DSA:3.40.50.2300 6 127 1.1E-25 T 05-07-2017 AC028_RS10340 29171c021aba947a6aab79b58e8da03c 216 Pfam PF13462 Thioredoxin 49 198 1.1E-11 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS10340 29171c021aba947a6aab79b58e8da03c 216 PIRSF PIRSF001488 6 211 1.5E-33 T 05-07-2017 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AC028_RS10340 29171c021aba947a6aab79b58e8da03c 216 SUPERFAMILY SSF52833 27 206 1.16E-40 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS10340 29171c021aba947a6aab79b58e8da03c 216 ProSitePatterns PS00194 Thioredoxin family active site. 52 70 - T 05-07-2017 IPR017937 Thioredoxin, conserved site GO:0045454 AC028_RS10340 29171c021aba947a6aab79b58e8da03c 216 Gene3D G3DSA:3.40.30.10 30 211 7.9E-51 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS13990 f6823b8724357cb10513abbae5fcd308 244 Pfam PF00114 Pilin (bacterial filament) 141 243 3.8E-14 T 05-07-2017 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 AC028_RS13990 f6823b8724357cb10513abbae5fcd308 244 Pfam PF14237 Domain of unknown function (DUF4339) 4 48 1.1E-12 T 05-07-2017 IPR025640 Domain of unknown function DUF4339 AC028_RS13990 f6823b8724357cb10513abbae5fcd308 244 SUPERFAMILY SSF54523 126 243 7.32E-20 T 05-07-2017 AC028_RS13990 f6823b8724357cb10513abbae5fcd308 244 Gene3D G3DSA:3.30.700.10 110 244 2.6E-24 T 05-07-2017 AC028_RS11095 0884a2f137de8d70c699ee380d5718ed 807 Pfam PF03968 OstA-like protein 62 191 2.1E-7 T 05-07-2017 IPR005653 Organic solvent tolerance-like, N-terminal AC028_RS11095 0884a2f137de8d70c699ee380d5718ed 807 Gene3D G3DSA:2.60.450.10 55 205 2.6E-12 T 05-07-2017 AC028_RS11095 0884a2f137de8d70c699ee380d5718ed 807 SUPERFAMILY SSF56935 610 716 7.32E-5 T 05-07-2017 AC028_RS11095 0884a2f137de8d70c699ee380d5718ed 807 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 1 765 20.478 T 05-07-2017 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 AC028_RS11095 0884a2f137de8d70c699ee380d5718ed 807 Pfam PF04453 Organic solvent tolerance protein 296 704 8.0E-101 T 05-07-2017 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 AC028_RS18730 45ff3284a5c23934c547b72bca0b435f 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 3.8E-36 T 05-07-2017 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AC028_RS18730 45ff3284a5c23934c547b72bca0b435f 72 SMART SM00316 4 72 4.1E-5 T 05-07-2017 IPR022967 RNA-binding domain, S1 AC028_RS18730 45ff3284a5c23934c547b72bca0b435f 72 Gene3D G3DSA:2.40.50.140 1 72 6.0E-39 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS18730 45ff3284a5c23934c547b72bca0b435f 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.2E-27 T 05-07-2017 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AC028_RS18730 45ff3284a5c23934c547b72bca0b435f 72 SUPERFAMILY SSF50249 1 70 9.06E-28 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS18730 45ff3284a5c23934c547b72bca0b435f 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.907 T 05-07-2017 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AC028_RS16830 d9321e69f6f2f4c5455cf69c50960edd 320 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 11 315 2.2E-109 T 05-07-2017 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 AC028_RS16830 d9321e69f6f2f4c5455cf69c50960edd 320 Pfam PF00152 tRNA synthetases class II (D, K and N) 9 315 9.6E-34 T 05-07-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AC028_RS16830 d9321e69f6f2f4c5455cf69c50960edd 320 PRINTS PR00982 Lysyl-tRNA synthetase signature 204 220 2.2E-6 T 05-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AC028_RS16830 d9321e69f6f2f4c5455cf69c50960edd 320 PRINTS PR00982 Lysyl-tRNA synthetase signature 26 36 2.2E-6 T 05-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AC028_RS16830 d9321e69f6f2f4c5455cf69c50960edd 320 PRINTS PR00982 Lysyl-tRNA synthetase signature 94 111 2.2E-6 T 05-07-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AC028_RS16830 d9321e69f6f2f4c5455cf69c50960edd 320 SUPERFAMILY SSF55681 9 315 2.59E-65 T 05-07-2017 AC028_RS16830 d9321e69f6f2f4c5455cf69c50960edd 320 Gene3D G3DSA:3.30.930.10 9 315 1.3E-53 T 05-07-2017 AC028_RS10330 d58cd726710863e2d9ddd737a1460875 245 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 2 230 7.1E-19 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS10330 d58cd726710863e2d9ddd737a1460875 245 SUPERFAMILY SSF56219 1 241 3.53E-30 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS10330 d58cd726710863e2d9ddd737a1460875 245 Gene3D G3DSA:3.60.10.10 46 237 5.6E-8 T 05-07-2017 IPR005135 Endonuclease/exonuclease/phosphatase AC028_RS17860 f4f2c2e16254fa0986716efe5c3052ff 217 SMART SM01007 20 208 2.8E-49 T 05-07-2017 IPR001303 Class II aldolase/adducin N-terminal AC028_RS17860 f4f2c2e16254fa0986716efe5c3052ff 217 Gene3D G3DSA:3.40.225.10 17 213 8.3E-45 T 05-07-2017 IPR001303 Class II aldolase/adducin N-terminal AC028_RS17860 f4f2c2e16254fa0986716efe5c3052ff 217 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 22 206 1.7E-39 T 05-07-2017 IPR001303 Class II aldolase/adducin N-terminal AC028_RS17860 f4f2c2e16254fa0986716efe5c3052ff 217 SUPERFAMILY SSF53639 16 213 4.12E-44 T 05-07-2017 IPR001303 Class II aldolase/adducin N-terminal AC028_RS17860 f4f2c2e16254fa0986716efe5c3052ff 217 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 216 106.157 T 05-07-2017 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|Reactome: R-HSA-1237112 AC028_RS17860 f4f2c2e16254fa0986716efe5c3052ff 217 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 22 212 2.1E-72 T 05-07-2017 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|Reactome: R-HSA-1237112 AC028_RS13340 0a6bdc21ce321ad1b6c151fef093c39b 403 SUPERFAMILY SSF51445 13 373 6.03E-83 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS13340 0a6bdc21ce321ad1b6c151fef093c39b 403 Pfam PF07745 Glycosyl hydrolase family 53 32 368 2.0E-115 T 05-07-2017 IPR011683 Glycosyl hydrolase family 53 GO:0015926 AC028_RS13340 0a6bdc21ce321ad1b6c151fef093c39b 403 Gene3D G3DSA:3.20.20.80 12 374 7.7E-113 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS04415 d5ff8fc2caa4cfbb8d5a1d3e24d2aa69 334 PIRSF PIRSF006621 3 327 1.4E-76 T 05-07-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AC028_RS04415 d5ff8fc2caa4cfbb8d5a1d3e24d2aa69 334 Pfam PF01207 Dihydrouridine synthase (Dus) 16 317 1.0E-77 T 05-07-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AC028_RS04415 d5ff8fc2caa4cfbb8d5a1d3e24d2aa69 334 Gene3D G3DSA:3.20.20.70 13 256 1.3E-74 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS04415 d5ff8fc2caa4cfbb8d5a1d3e24d2aa69 334 SUPERFAMILY SSF51395 13 324 3.62E-73 T 05-07-2017 AC028_RS04415 d5ff8fc2caa4cfbb8d5a1d3e24d2aa69 334 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 95 113 - T 05-07-2017 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AC028_RS04415 d5ff8fc2caa4cfbb8d5a1d3e24d2aa69 334 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 8 327 48.536 T 05-07-2017 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AC028_RS07470 2140586b7f19e06559c1cf881f7dc178 799 SUPERFAMILY SSF74650 15 289 9.42E-71 T 05-07-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AC028_RS07470 2140586b7f19e06559c1cf881f7dc178 799 Gene3D G3DSA:2.60.420.10 716 762 7.2E-6 T 05-07-2017 AC028_RS07470 2140586b7f19e06559c1cf881f7dc178 799 Gene3D G3DSA:2.70.98.40 21 347 1.5E-56 T 05-07-2017 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 AC028_RS07470 2140586b7f19e06559c1cf881f7dc178 799 Pfam PF06165 Glycosyltransferase family 36 88 287 1.0E-23 T 05-07-2017 IPR010383 Glycosyl hydrolase 94 AC028_RS07470 2140586b7f19e06559c1cf881f7dc178 799 SUPERFAMILY SSF48208 294 797 2.38E-78 T 05-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AC028_RS07470 2140586b7f19e06559c1cf881f7dc178 799 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 326 724 6.0E-60 T 05-07-2017 IPR033432 Glycosyl hydrolase 36, catalytic domain AC028_RS12560 d9a8178652b0c01eca3f5b1753dc909f 209 Gene3D G3DSA:1.10.357.10 20 183 1.8E-15 T 05-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AC028_RS12560 d9a8178652b0c01eca3f5b1753dc909f 209 SUPERFAMILY SSF46689 8 81 7.7E-12 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS12560 d9a8178652b0c01eca3f5b1753dc909f 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 1.4E-9 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS03185 99e719805022414b0bde6595de4601f9 283 Gene3D G3DSA:1.10.40.60 100 192 7.8E-23 T 05-07-2017 AC028_RS03185 99e719805022414b0bde6595de4601f9 283 Pfam PF03934 Type II secretion system (T2SS), protein K 31 223 2.1E-46 T 05-07-2017 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AC028_RS03185 99e719805022414b0bde6595de4601f9 283 PIRSF PIRSF002786 1 279 1.3E-53 T 05-07-2017 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AC028_RS03185 99e719805022414b0bde6595de4601f9 283 SUPERFAMILY SSF158544 95 192 3.66E-23 T 05-07-2017 AC028_RS09065 2f5899e491ca4f7cca7619033a3ef9d3 133 Pfam PF12760 Transposase zinc-ribbon domain 23 69 1.1E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS07850 7f57622d6d502f6c8b65fc48619c955a 869 Gene3D G3DSA:3.20.20.80 524 564 1.5E-72 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS07850 7f57622d6d502f6c8b65fc48619c955a 869 Gene3D G3DSA:3.20.20.80 255 338 1.5E-72 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS07850 7f57622d6d502f6c8b65fc48619c955a 869 Gene3D G3DSA:3.20.20.80 6 96 1.5E-72 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS07850 7f57622d6d502f6c8b65fc48619c955a 869 Gene3D G3DSA:3.20.20.80 676 799 1.5E-72 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS07850 7f57622d6d502f6c8b65fc48619c955a 869 Gene3D G3DSA:1.10.10.470 565 667 2.4E-26 T 05-07-2017 IPR013797 Maltooligosyl trehalose synthase, N-terminal MetaCyc: PWY-2661 AC028_RS07850 7f57622d6d502f6c8b65fc48619c955a 869 SUPERFAMILY SSF51445 5 138 1.02E-126 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS07850 7f57622d6d502f6c8b65fc48619c955a 869 SUPERFAMILY SSF51445 474 766 1.02E-126 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS07850 7f57622d6d502f6c8b65fc48619c955a 869 SUPERFAMILY SSF51445 197 440 1.02E-126 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS07850 7f57622d6d502f6c8b65fc48619c955a 869 Pfam PF00128 Alpha amylase, catalytic domain 24 117 5.4E-14 T 05-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AC028_RS07850 7f57622d6d502f6c8b65fc48619c955a 869 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 5 865 0.0 T 05-07-2017 IPR012767 Malto-oligosyltrehalose synthase MetaCyc: PWY-2661 AC028_RS07850 7f57622d6d502f6c8b65fc48619c955a 869 SMART SM00642 7 442 2.3E-6 T 05-07-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AC028_RS07850 7f57622d6d502f6c8b65fc48619c955a 869 Gene3D G3DSA:3.30.1590.10 97 239 1.6E-42 T 05-07-2017 AC028_RS13810 018689f9420dbd77782677e624a8629b 414 Gene3D G3DSA:2.40.50.100 183 215 1.7E-22 T 05-07-2017 AC028_RS13810 018689f9420dbd77782677e624a8629b 414 Gene3D G3DSA:2.40.50.100 74 108 1.7E-22 T 05-07-2017 AC028_RS13810 018689f9420dbd77782677e624a8629b 414 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 377 2.0E-83 T 05-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AC028_RS13810 018689f9420dbd77782677e624a8629b 414 SUPERFAMILY SSF111369 64 300 2.62E-57 T 05-07-2017 AC028_RS13810 018689f9420dbd77782677e624a8629b 414 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 74 295 5.6E-21 T 05-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_RS15605 ae06a657b5a6c6480820fb2cf4394848 514 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 80 104 - T 05-07-2017 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 AC028_RS15605 ae06a657b5a6c6480820fb2cf4394848 514 SUPERFAMILY SSF103473 58 111 4.19E-6 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS15605 ae06a657b5a6c6480820fb2cf4394848 514 Gene3D G3DSA:1.20.1250.20 32 111 5.8E-4 T 05-07-2017 AC028_RS02475 ba49a17bea37b768b587ee3d13bd7fb5 260 Pfam PF05137 Fimbrial assembly protein (PilN) 100 189 1.1E-27 T 05-07-2017 IPR007813 Fimbrial assembly PilN AC028_RS05780 1ef618fee298cc4c5f5bcbf9f1213658 441 SMART SM00833 263 416 2.7E-42 T 05-07-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AC028_RS05780 1ef618fee298cc4c5f5bcbf9f1213658 441 Gene3D G3DSA:3.30.1220.10 390 416 5.7E-12 T 05-07-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AC028_RS05780 1ef618fee298cc4c5f5bcbf9f1213658 441 Gene3D G3DSA:3.30.1220.10 249 327 5.7E-12 T 05-07-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AC028_RS05780 1ef618fee298cc4c5f5bcbf9f1213658 441 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 12 217 5.6E-55 T 05-07-2017 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AC028_RS05780 1ef618fee298cc4c5f5bcbf9f1213658 441 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 263 416 3.9E-22 T 05-07-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AC028_RS05780 1ef618fee298cc4c5f5bcbf9f1213658 441 Gene3D G3DSA:3.40.50.300 10 236 6.1E-72 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS05780 1ef618fee298cc4c5f5bcbf9f1213658 441 SUPERFAMILY SSF52540 8 316 1.42E-41 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS14170 f3aafc45eeac948b283eff5dcc5460b3 956 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 198 545 6.1E-68 T 05-07-2017 IPR010090 Phage tail tape measure protein AC028_RS14170 f3aafc45eeac948b283eff5dcc5460b3 956 Pfam PF10145 Phage-related minor tail protein 237 436 3.5E-32 T 05-07-2017 IPR010090 Phage tail tape measure protein AC028_RS04810 9ae94d3f6a1e1549933dc5bd77861b29 297 Gene3D G3DSA:3.30.1330.40 195 294 8.0E-6 T 05-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AC028_RS04810 9ae94d3f6a1e1549933dc5bd77861b29 297 SUPERFAMILY SSF55298 165 294 3.87E-8 T 05-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AC028_RS01195 7e08b7b02e2327dc7606d58a2e17cba0 291 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 206 281 3.6E-18 T 05-07-2017 IPR006260 TonB, C-terminal GO:0006810 AC028_RS01195 7e08b7b02e2327dc7606d58a2e17cba0 291 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 204 272 8.0E-16 T 05-07-2017 IPR006260 TonB, C-terminal GO:0006810 AC028_RS01195 7e08b7b02e2327dc7606d58a2e17cba0 291 Gene3D G3DSA:3.30.1150.10 179 285 2.5E-22 T 05-07-2017 AC028_RS01195 7e08b7b02e2327dc7606d58a2e17cba0 291 SUPERFAMILY SSF74653 178 285 7.85E-21 T 05-07-2017 AC028_RS08055 56f14523b36e165e3f01151eb57cfade 279 Gene3D G3DSA:2.40.160.20 93 232 2.8E-16 T 05-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AC028_RS08055 56f14523b36e165e3f01151eb57cfade 279 Gene3D G3DSA:2.40.160.20 27 55 2.8E-16 T 05-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AC028_RS08055 56f14523b36e165e3f01151eb57cfade 279 Pfam PF13505 Outer membrane protein beta-barrel domain 9 227 1.7E-9 T 05-07-2017 IPR027385 Outer membrane protein beta-barrel AC028_RS08055 56f14523b36e165e3f01151eb57cfade 279 SUPERFAMILY SSF103515 47 226 6.02E-13 T 05-07-2017 IPR005546 Autotransporter beta-domain AC028_RS03550 4f88b55f8984292dd3465dd61b515060 158 Pfam PF01402 Ribbon-helix-helix protein, copG family 10 41 2.5E-4 T 05-07-2017 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 AC028_RS03550 4f88b55f8984292dd3465dd61b515060 158 Gene3D G3DSA:1.10.1220.10 6 38 7.3E-6 T 05-07-2017 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AC028_RS03550 4f88b55f8984292dd3465dd61b515060 158 SUPERFAMILY SSF47598 4 42 3.22E-6 T 05-07-2017 IPR010985 Ribbon-helix-helix GO:0006355 AC028_RS13090 bba40c78dd27972f3dc3f57cdf11b56b 476 SMART SM00342 389 474 1.9E-20 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS13090 bba40c78dd27972f3dc3f57cdf11b56b 476 Gene3D G3DSA:1.10.10.60 373 428 3.9E-11 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS13090 bba40c78dd27972f3dc3f57cdf11b56b 476 SUPERFAMILY SSF46689 376 423 7.62E-6 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS13090 bba40c78dd27972f3dc3f57cdf11b56b 476 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 426 470 - T 05-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AC028_RS13090 bba40c78dd27972f3dc3f57cdf11b56b 476 Gene3D G3DSA:1.25.40.10 71 179 4.1E-4 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS13090 bba40c78dd27972f3dc3f57cdf11b56b 476 Pfam PF12833 Helix-turn-helix domain 395 476 1.9E-17 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS13090 bba40c78dd27972f3dc3f57cdf11b56b 476 SUPERFAMILY SSF48452 59 165 4.27E-7 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS05255 fd8fac75af887399c8970081414a9696 89 Gene3D G3DSA:1.10.10.10 5 84 3.4E-31 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS05255 fd8fac75af887399c8970081414a9696 89 Pfam PF11625 Protein of unknown function (DUF3253) 7 84 1.3E-28 T 05-07-2017 IPR021660 Protein of unknown function DUF3253 AC028_RS05255 fd8fac75af887399c8970081414a9696 89 SUPERFAMILY SSF46785 5 84 1.09E-24 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS05125 125fad3c550f6107836c0094b71a157c 273 SUPERFAMILY SSF56529 13 268 2.75E-36 T 05-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AC028_RS05125 125fad3c550f6107836c0094b71a157c 273 Gene3D G3DSA:3.90.850.10 14 270 1.4E-41 T 05-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AC028_RS07600 fbcdecec666290e8c4e2ea6ad83038b4 294 SUPERFAMILY SSF54534 141 250 3.53E-21 T 05-07-2017 AC028_RS07600 fbcdecec666290e8c4e2ea6ad83038b4 294 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 186 207 - T 05-07-2017 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-936440 AC028_RS07600 fbcdecec666290e8c4e2ea6ad83038b4 294 Gene3D G3DSA:3.10.50.40 141 268 2.6E-25 T 05-07-2017 AC028_RS07600 fbcdecec666290e8c4e2ea6ad83038b4 294 Pfam PF13616 PPIC-type PPIASE domain 139 248 4.3E-16 T 05-07-2017 AC028_RS07600 fbcdecec666290e8c4e2ea6ad83038b4 294 SUPERFAMILY SSF109998 62 155 1.22E-5 T 05-07-2017 IPR027304 Trigger factor/SurA domain AC028_RS05970 71b2b8d08fe119cce07b75477f79310b 305 Gene3D G3DSA:3.40.190.10 177 263 1.2E-13 T 05-07-2017 AC028_RS05970 71b2b8d08fe119cce07b75477f79310b 305 Gene3D G3DSA:3.40.190.10 92 176 6.0E-17 T 05-07-2017 AC028_RS05970 71b2b8d08fe119cce07b75477f79310b 305 Gene3D G3DSA:1.10.10.10 8 88 8.4E-21 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS05970 71b2b8d08fe119cce07b75477f79310b 305 Pfam PF03466 LysR substrate binding domain 90 294 3.6E-34 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS05970 71b2b8d08fe119cce07b75477f79310b 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 64 6.0E-17 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS05970 71b2b8d08fe119cce07b75477f79310b 305 SUPERFAMILY SSF46785 6 110 1.77E-16 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS05970 71b2b8d08fe119cce07b75477f79310b 305 SUPERFAMILY SSF53850 92 299 4.65E-34 T 05-07-2017 AC028_RS08710 e072d3544cb296265154b044216d0d05 135 Gene3D G3DSA:3.10.180.10 6 124 2.8E-18 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS08710 e072d3544cb296265154b044216d0d05 135 SUPERFAMILY SSF54593 6 125 9.53E-19 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS18540 e7461f3f5e5619d24c2b471b811bd8be 73 Gene3D G3DSA:1.10.1200.10 18 72 9.8E-6 T 05-07-2017 IPR009081 Phosphopantetheine binding ACP domain AC028_RS18540 e7461f3f5e5619d24c2b471b811bd8be 73 SUPERFAMILY SSF47336 8 72 4.89E-8 T 05-07-2017 IPR009081 Phosphopantetheine binding ACP domain AC028_RS12795 0df0e239860543fd73fda81d111a63be 284 PRINTS PR00069 Aldo-keto reductase signature 206 230 1.3E-15 T 05-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AC028_RS12795 0df0e239860543fd73fda81d111a63be 284 PRINTS PR00069 Aldo-keto reductase signature 47 71 1.3E-15 T 05-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AC028_RS12795 0df0e239860543fd73fda81d111a63be 284 PRINTS PR00069 Aldo-keto reductase signature 102 120 1.3E-15 T 05-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AC028_RS12795 0df0e239860543fd73fda81d111a63be 284 PRINTS PR00069 Aldo-keto reductase signature 132 149 1.3E-15 T 05-07-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AC028_RS12795 0df0e239860543fd73fda81d111a63be 284 Gene3D G3DSA:3.20.20.100 12 273 8.0E-67 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS12795 0df0e239860543fd73fda81d111a63be 284 SUPERFAMILY SSF51430 14 273 7.6E-67 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS12795 0df0e239860543fd73fda81d111a63be 284 Pfam PF00248 Aldo/keto reductase family 23 271 2.1E-46 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS11465 c91835400a14fe0c11be7baac31d07c6 425 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 14 309 21.374 T 05-07-2017 IPR023679 Uncharacterised protein family UPF0761, bacterial AC028_RS11465 c91835400a14fe0c11be7baac31d07c6 425 Pfam PF03631 Virulence factor BrkB 33 279 1.4E-56 T 05-07-2017 IPR017039 Virulence factor BrkB AC028_RS11465 c91835400a14fe0c11be7baac31d07c6 425 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 22 281 1.2E-72 T 05-07-2017 IPR017039 Virulence factor BrkB AC028_RS14555 b35235ca4abc665cf47900b0ac50ad93 314 Gene3D G3DSA:3.40.50.300 2 229 1.7E-67 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS14555 b35235ca4abc665cf47900b0ac50ad93 314 Pfam PF00005 ABC transporter 21 163 2.2E-33 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS14555 b35235ca4abc665cf47900b0ac50ad93 314 SMART SM00382 30 226 6.5E-18 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS14555 b35235ca4abc665cf47900b0ac50ad93 314 SUPERFAMILY SSF52540 4 227 5.24E-64 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS14555 b35235ca4abc665cf47900b0ac50ad93 314 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS15470 c417403daeb97faea6a3a3c40744f1c9 265 Pfam PF00318 Ribosomal protein S2 9 224 1.4E-92 T 05-07-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS15470 c417403daeb97faea6a3a3c40744f1c9 265 Gene3D G3DSA:1.10.287.610 100 152 1.2E-22 T 05-07-2017 AC028_RS15470 c417403daeb97faea6a3a3c40744f1c9 265 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 05-07-2017 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AC028_RS15470 c417403daeb97faea6a3a3c40744f1c9 265 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 40.936 T 05-07-2017 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 AC028_RS15470 c417403daeb97faea6a3a3c40744f1c9 265 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 1.8E-100 T 05-07-2017 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 AC028_RS15470 c417403daeb97faea6a3a3c40744f1c9 265 SUPERFAMILY SSF52313 6 229 5.62E-91 T 05-07-2017 IPR023591 Ribosomal protein S2, flavodoxin-like domain AC028_RS15470 c417403daeb97faea6a3a3c40744f1c9 265 Gene3D G3DSA:3.40.50.10490 158 240 8.6E-63 T 05-07-2017 AC028_RS15470 c417403daeb97faea6a3a3c40744f1c9 265 Gene3D G3DSA:3.40.50.10490 23 99 8.6E-63 T 05-07-2017 AC028_RS15470 c417403daeb97faea6a3a3c40744f1c9 265 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.5E-36 T 05-07-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS15470 c417403daeb97faea6a3a3c40744f1c9 265 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.5E-36 T 05-07-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS15470 c417403daeb97faea6a3a3c40744f1c9 265 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.5E-36 T 05-07-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS15470 c417403daeb97faea6a3a3c40744f1c9 265 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.5E-36 T 05-07-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS15470 c417403daeb97faea6a3a3c40744f1c9 265 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.5E-36 T 05-07-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS15470 c417403daeb97faea6a3a3c40744f1c9 265 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.5E-36 T 05-07-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS15470 c417403daeb97faea6a3a3c40744f1c9 265 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 05-07-2017 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AC028_RS12120 7248bb22a05dd1436eeccaa2eb8df442 255 Pfam PF00753 Metallo-beta-lactamase superfamily 16 165 1.3E-17 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS12120 7248bb22a05dd1436eeccaa2eb8df442 255 SMART SM00849 11 165 1.4E-33 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS12120 7248bb22a05dd1436eeccaa2eb8df442 255 Gene3D G3DSA:3.60.15.10 5 254 2.5E-84 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS12120 7248bb22a05dd1436eeccaa2eb8df442 255 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 253 2.3E-26 T 05-07-2017 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AC028_RS12120 7248bb22a05dd1436eeccaa2eb8df442 255 SUPERFAMILY SSF56281 1 254 2.49E-67 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS12120 7248bb22a05dd1436eeccaa2eb8df442 255 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 253 43.508 T 05-07-2017 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AC028_RS12120 7248bb22a05dd1436eeccaa2eb8df442 255 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 253 5.1E-102 T 05-07-2017 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AC028_RS12120 7248bb22a05dd1436eeccaa2eb8df442 255 PIRSF PIRSF005457 1 253 1.6E-93 T 05-07-2017 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AC028_RS13695 c5440fd189bda5e6cc22e677f671d2dd 392 Gene3D G3DSA:2.120.10.30 21 387 3.1E-103 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS13695 c5440fd189bda5e6cc22e677f671d2dd 392 Pfam PF07995 Glucose / Sorbosone dehydrogenase 48 373 6.3E-127 T 05-07-2017 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 AC028_RS13695 c5440fd189bda5e6cc22e677f671d2dd 392 SUPERFAMILY SSF50952 25 372 1.09E-42 T 05-07-2017 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AC028_RS20595 67d7873d160f2fb823eb871292364241 292 SUPERFAMILY SSF54631 65 201 7.33E-31 T 05-07-2017 AC028_RS20595 67d7873d160f2fb823eb871292364241 292 SMART SM00116 141 189 1.9 T 05-07-2017 IPR000644 CBS domain AC028_RS20595 67d7873d160f2fb823eb871292364241 292 SMART SM00116 78 127 3.5 T 05-07-2017 IPR000644 CBS domain AC028_RS20595 67d7873d160f2fb823eb871292364241 292 SUPERFAMILY SSF56176 206 290 3.54E-24 T 05-07-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AC028_RS20595 67d7873d160f2fb823eb871292364241 292 SMART SM01091 207 285 1.6E-28 T 05-07-2017 IPR005170 Transporter-associated domain AC028_RS20595 67d7873d160f2fb823eb871292364241 292 Gene3D G3DSA:3.30.465.10 198 285 1.2E-27 T 05-07-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AC028_RS20595 67d7873d160f2fb823eb871292364241 292 Pfam PF03471 Transporter associated domain 209 283 4.2E-22 T 05-07-2017 IPR005170 Transporter-associated domain AC028_RS20595 67d7873d160f2fb823eb871292364241 292 Pfam PF00571 CBS domain 137 189 5.3E-5 T 05-07-2017 IPR000644 CBS domain AC028_RS20595 67d7873d160f2fb823eb871292364241 292 Pfam PF00571 CBS domain 69 124 2.9E-5 T 05-07-2017 IPR000644 CBS domain AC028_RS20595 67d7873d160f2fb823eb871292364241 292 Gene3D G3DSA:3.10.580.10 57 197 9.2E-19 T 05-07-2017 AC028_RS21565 1cada37080e213973066872bac3ee2e3 500 Pfam PF00361 Proton-conducting membrane transporter 128 428 8.3E-78 T 05-07-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21565 1cada37080e213973066872bac3ee2e3 500 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 494 1.1E-195 T 05-07-2017 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21565 1cada37080e213973066872bac3ee2e3 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 233 257 5.9E-40 T 05-07-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21565 1cada37080e213973066872bac3ee2e3 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 134 153 5.9E-40 T 05-07-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21565 1cada37080e213973066872bac3ee2e3 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 385 411 5.9E-40 T 05-07-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21565 1cada37080e213973066872bac3ee2e3 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 164 188 5.9E-40 T 05-07-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS05510 b025aeb001e25b44d609b2a304bc0663 106 Pfam PF13698 Domain of unknown function (DUF4156) 22 103 3.1E-9 T 05-07-2017 IPR025294 Protein of unknown function DUF4156 AC028_RS03760 75951e762fda889da5ff2e67c5f190cf 458 Gene3D G3DSA:3.30.420.40 111 241 3.9E-26 T 05-07-2017 AC028_RS03760 75951e762fda889da5ff2e67c5f190cf 458 Gene3D G3DSA:3.30.420.40 2 42 3.9E-26 T 05-07-2017 AC028_RS03760 75951e762fda889da5ff2e67c5f190cf 458 Pfam PF06723 MreB/Mbl protein 201 255 8.6E-7 T 05-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AC028_RS03760 75951e762fda889da5ff2e67c5f190cf 458 SUPERFAMILY SSF53067 235 294 3.32E-22 T 05-07-2017 AC028_RS03760 75951e762fda889da5ff2e67c5f190cf 458 SUPERFAMILY SSF53067 332 450 3.32E-22 T 05-07-2017 AC028_RS03760 75951e762fda889da5ff2e67c5f190cf 458 SUPERFAMILY SSF53067 111 229 1.1E-19 T 05-07-2017 AC028_RS03760 75951e762fda889da5ff2e67c5f190cf 458 SUPERFAMILY SSF53067 2 42 1.1E-19 T 05-07-2017 AC028_RS03760 75951e762fda889da5ff2e67c5f190cf 458 Gene3D G3DSA:3.30.420.40 242 265 1.3E-9 T 05-07-2017 AC028_RS03760 75951e762fda889da5ff2e67c5f190cf 458 Gene3D G3DSA:3.30.420.40 378 427 1.3E-9 T 05-07-2017 AC028_RS01390 ee18f5d4208636182d795b160363e7be 272 Pfam PF13525 Outer membrane lipoprotein 144 266 1.2E-13 T 05-07-2017 AC028_RS01390 ee18f5d4208636182d795b160363e7be 272 Pfam PF16331 TolA binding protein trimerisation 26 98 2.4E-18 T 05-07-2017 IPR032519 YbgF, trimerisation domain GO:0070206 AC028_RS01390 ee18f5d4208636182d795b160363e7be 272 Gene3D G3DSA:1.25.40.10 148 255 3.3E-13 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS01390 ee18f5d4208636182d795b160363e7be 272 SUPERFAMILY SSF48452 144 259 1.36E-14 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS01390 ee18f5d4208636182d795b160363e7be 272 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 145 262 2.3E-40 T 05-07-2017 IPR014162 Tol-Pal system, YbgF AC028_RS10100 a1b143f68880b664ba3d58bbec4eccbf 354 Gene3D G3DSA:3.40.50.150 49 176 5.4E-21 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS10100 a1b143f68880b664ba3d58bbec4eccbf 354 SUPERFAMILY SSF53335 50 174 2.98E-21 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS10100 a1b143f68880b664ba3d58bbec4eccbf 354 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 75 95 1.3E-5 T 05-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AC028_RS10100 a1b143f68880b664ba3d58bbec4eccbf 354 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 52 70 1.3E-5 T 05-07-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AC028_RS10100 a1b143f68880b664ba3d58bbec4eccbf 354 Pfam PF01555 DNA methylase 42 90 4.5E-7 T 05-07-2017 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AC028_RS09765 3e98a83db60594d53c458ab6779d1234 734 Gene3D G3DSA:1.10.287.950 466 670 2.2E-62 T 05-07-2017 AC028_RS09765 3e98a83db60594d53c458ab6779d1234 734 SMART SM01049 43 136 3.5E-28 T 05-07-2017 IPR033480 Single Cache domain 2 AC028_RS09765 3e98a83db60594d53c458ab6779d1234 734 SUPERFAMILY SSF158472 220 267 9.68E-9 T 05-07-2017 AC028_RS09765 3e98a83db60594d53c458ab6779d1234 734 Gene3D G3DSA:3.30.450.20 33 188 6.8E-39 T 05-07-2017 AC028_RS09765 3e98a83db60594d53c458ab6779d1234 734 SMART SM00283 451 698 2.8E-89 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS09765 3e98a83db60594d53c458ab6779d1234 734 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 517 697 6.6E-61 T 05-07-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AC028_RS09765 3e98a83db60594d53c458ab6779d1234 734 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 578 607 1.6E-56 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS09765 3e98a83db60594d53c458ab6779d1234 734 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 549 576 1.6E-56 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS09765 3e98a83db60594d53c458ab6779d1234 734 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 472 501 1.6E-56 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS09765 3e98a83db60594d53c458ab6779d1234 734 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 626 655 1.6E-56 T 05-07-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AC028_RS09765 3e98a83db60594d53c458ab6779d1234 734 Pfam PF00672 HAMP domain 200 267 2.8E-14 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS09765 3e98a83db60594d53c458ab6779d1234 734 SUPERFAMILY SSF58104 418 700 1.02E-71 T 05-07-2017 AC028_RS09765 3e98a83db60594d53c458ab6779d1234 734 SMART SM00304 398 450 0.074 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS09765 3e98a83db60594d53c458ab6779d1234 734 SMART SM00304 218 270 1.3E-8 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS09765 3e98a83db60594d53c458ab6779d1234 734 Pfam PF17200 Single Cache domain 2 48 195 1.2E-37 T 05-07-2017 IPR033480 Single Cache domain 2 AC028_RS10015 c24289b9581f613a2f4f37f96134f4df 372 Pfam PF01098 Cell cycle protein 21 367 1.4E-95 T 05-07-2017 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 AC028_RS10015 c24289b9581f613a2f4f37f96134f4df 372 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 325 349 - T 05-07-2017 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 AC028_RS10015 c24289b9581f613a2f4f37f96134f4df 372 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 1.7E-116 T 05-07-2017 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 AC028_RS16550 df1980d97b63b434e1c06575390ba999 416 SUPERFAMILY SSF56935 31 413 2.56E-9 T 05-07-2017 AC028_RS16550 df1980d97b63b434e1c06575390ba999 416 Pfam PF07396 Phosphate-selective porin O and P 41 416 1.7E-99 T 05-07-2017 IPR010870 Phosphate-selective porin O/P AC028_RS16550 df1980d97b63b434e1c06575390ba999 416 Gene3D G3DSA:2.40.160.10 32 416 2.2E-103 T 05-07-2017 IPR023614 Porin domain AC028_RS06340 657a32469e8292f42ddb58bf33e5d281 294 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 5 265 30.597 T 05-07-2017 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 AC028_RS06340 657a32469e8292f42ddb58bf33e5d281 294 SUPERFAMILY SSF53335 10 216 9.76E-39 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS06340 657a32469e8292f42ddb58bf33e5d281 294 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 13 264 3.4E-73 T 05-07-2017 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 AC028_RS06340 657a32469e8292f42ddb58bf33e5d281 294 Gene3D G3DSA:3.40.50.150 39 266 1.3E-39 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS06340 657a32469e8292f42ddb58bf33e5d281 294 Pfam PF08241 Methyltransferase domain 51 147 2.4E-20 T 05-07-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AC028_RS20805 eef282f18ea98c53d85c3bf6ed7eba72 434 Gene3D G3DSA:2.40.50.100 60 93 2.3E-20 T 05-07-2017 AC028_RS20805 eef282f18ea98c53d85c3bf6ed7eba72 434 Gene3D G3DSA:2.40.50.100 168 202 2.3E-20 T 05-07-2017 AC028_RS20805 eef282f18ea98c53d85c3bf6ed7eba72 434 SUPERFAMILY SSF111369 48 292 5.62E-69 T 05-07-2017 AC028_RS20805 eef282f18ea98c53d85c3bf6ed7eba72 434 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 289 6.4E-13 T 05-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_RS20805 eef282f18ea98c53d85c3bf6ed7eba72 434 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 367 1.2E-74 T 05-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AC028_RS21955 6f1fcecbaf951634f6d40ebe65cb0ef3 173 Pfam PF14521 Lysine-specific metallo-endopeptidase 37 167 8.0E-45 T 05-07-2017 IPR029463 Lysine-specific metallo-endopeptidase GO:0004222 AC028_RS21955 6f1fcecbaf951634f6d40ebe65cb0ef3 173 Gene3D G3DSA:3.40.390.10 8 171 6.0E-51 T 05-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AC028_RS21955 6f1fcecbaf951634f6d40ebe65cb0ef3 173 SUPERFAMILY SSF55486 7 172 9.16E-53 T 05-07-2017 AC028_RS21955 6f1fcecbaf951634f6d40ebe65cb0ef3 173 SMART SM01351 34 167 6.1E-66 T 05-07-2017 IPR029463 Lysine-specific metallo-endopeptidase GO:0004222 AC028_RS12170 33e11df3cb7a76556ae3e24c1689ab1e 343 Pfam PF04055 Radical SAM superfamily 28 190 1.5E-24 T 05-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AC028_RS12170 33e11df3cb7a76556ae3e24c1689ab1e 343 SMART SM00729 23 225 5.8E-4 T 05-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AC028_RS12170 33e11df3cb7a76556ae3e24c1689ab1e 343 SUPERFAMILY SSF102114 13 291 1.09E-67 T 05-07-2017 AC028_RS12170 33e11df3cb7a76556ae3e24c1689ab1e 343 Gene3D G3DSA:3.20.20.70 13 302 5.5E-71 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS12170 33e11df3cb7a76556ae3e24c1689ab1e 343 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 14 343 3.8E-104 T 05-07-2017 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AC028_RS12170 33e11df3cb7a76556ae3e24c1689ab1e 343 Pfam PF06463 Molybdenum Cofactor Synthesis C 200 323 5.3E-34 T 05-07-2017 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AC028_RS12170 33e11df3cb7a76556ae3e24c1689ab1e 343 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 29 40 - T 05-07-2017 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AC028_RS12170 33e11df3cb7a76556ae3e24c1689ab1e 343 Pfam PF13353 4Fe-4S single cluster domain 31 117 6.3E-6 T 05-07-2017 AC028_RS12170 33e11df3cb7a76556ae3e24c1689ab1e 343 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 14 343 39.282 T 05-07-2017 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AC028_RS05320 4b88360c35ab084b698ca23ecddb327e 690 Gene3D G3DSA:1.25.40.10 9 100 5.4E-13 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS05320 4b88360c35ab084b698ca23ecddb327e 690 Gene3D G3DSA:1.25.40.10 101 154 7.5E-8 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS05320 4b88360c35ab084b698ca23ecddb327e 690 SUPERFAMILY SSF48452 165 387 9.86E-16 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS05320 4b88360c35ab084b698ca23ecddb327e 690 Pfam PF13432 Tetratricopeptide repeat 38 98 2.4E-4 T 05-07-2017 AC028_RS05320 4b88360c35ab084b698ca23ecddb327e 690 Pfam PF13432 Tetratricopeptide repeat 105 168 1.9E-5 T 05-07-2017 AC028_RS05320 4b88360c35ab084b698ca23ecddb327e 690 Pfam PF13432 Tetratricopeptide repeat 209 270 2.0E-7 T 05-07-2017 AC028_RS05320 4b88360c35ab084b698ca23ecddb327e 690 SUPERFAMILY SSF48452 9 240 9.49E-28 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS05320 4b88360c35ab084b698ca23ecddb327e 690 SMART SM00028 237 270 39.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS05320 4b88360c35ab084b698ca23ecddb327e 690 SMART SM00028 66 99 69.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS05320 4b88360c35ab084b698ca23ecddb327e 690 SMART SM00028 134 167 82.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS05320 4b88360c35ab084b698ca23ecddb327e 690 SMART SM00028 32 65 0.2 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS05320 4b88360c35ab084b698ca23ecddb327e 690 SMART SM00028 100 133 27.0 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS05320 4b88360c35ab084b698ca23ecddb327e 690 SMART SM00028 168 201 0.065 T 05-07-2017 IPR019734 Tetratricopeptide repeat GO:0005515 AC028_RS05320 4b88360c35ab084b698ca23ecddb327e 690 Gene3D G3DSA:1.25.40.10 155 300 7.0E-29 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS05320 4b88360c35ab084b698ca23ecddb327e 690 Gene3D G3DSA:1.25.40.10 333 433 7.0E-29 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS07425 e9754dcf012534583e1dd01c2020ffec 593 Pfam PF01103 Surface antigen 304 582 2.3E-32 T 05-07-2017 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 AC028_RS07425 e9754dcf012534583e1dd01c2020ffec 593 Gene3D G3DSA:2.40.160.50 240 590 5.1E-18 T 05-07-2017 AC028_RS07425 e9754dcf012534583e1dd01c2020ffec 593 Pfam PF07244 Surface antigen variable number repeat 120 191 1.2E-5 T 05-07-2017 IPR010827 Surface antigen variable number GO:0019867 AC028_RS13845 d14900883bd693c5873709b45f5a94a4 315 Gene3D G3DSA:3.40.190.10 92 176 1.1E-28 T 05-07-2017 AC028_RS13845 d14900883bd693c5873709b45f5a94a4 315 SUPERFAMILY SSF53850 91 292 8.87E-34 T 05-07-2017 AC028_RS13845 d14900883bd693c5873709b45f5a94a4 315 SUPERFAMILY SSF46785 6 111 5.71E-20 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS13845 d14900883bd693c5873709b45f5a94a4 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.5E-16 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS13845 d14900883bd693c5873709b45f5a94a4 315 Gene3D G3DSA:3.40.190.10 177 251 5.5E-13 T 05-07-2017 AC028_RS13845 d14900883bd693c5873709b45f5a94a4 315 Gene3D G3DSA:1.10.10.10 4 82 3.3E-22 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS13845 d14900883bd693c5873709b45f5a94a4 315 Pfam PF03466 LysR substrate binding domain 89 286 8.9E-28 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS13875 8003157613be7552460c521d8cca9149 316 PIRSF PIRSF003097 18 310 3.5E-57 T 05-07-2017 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 AC028_RS13875 8003157613be7552460c521d8cca9149 316 Pfam PF02687 FtsX-like permease family 190 310 9.1E-10 T 05-07-2017 IPR003838 ABC transporter permease protein domain GO:0016020 AC028_RS00130 0662f78ca92a01a6f0e6407d50c8c809 340 Pfam PF02625 XdhC and CoxI family 34 101 7.1E-24 T 05-07-2017 IPR003777 XdhC- CoxI AC028_RS00130 0662f78ca92a01a6f0e6407d50c8c809 340 Pfam PF13478 XdhC Rossmann domain 179 325 8.5E-20 T 05-07-2017 IPR027051 XdhC Rossmann domain AC028_RS11205 b891f18e496d17fa5f704cf965740317 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 287 302 4.3E-20 T 05-07-2017 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 AC028_RS11205 b891f18e496d17fa5f704cf965740317 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 152 166 4.3E-20 T 05-07-2017 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 AC028_RS11205 b891f18e496d17fa5f704cf965740317 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 335 351 4.3E-20 T 05-07-2017 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 AC028_RS11205 b891f18e496d17fa5f704cf965740317 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 90 106 4.3E-20 T 05-07-2017 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 AC028_RS11205 b891f18e496d17fa5f704cf965740317 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 36 49 4.3E-20 T 05-07-2017 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 AC028_RS11205 b891f18e496d17fa5f704cf965740317 369 SUPERFAMILY SSF55347 168 323 6.05E-22 T 05-07-2017 AC028_RS11205 b891f18e496d17fa5f704cf965740317 369 Gene3D G3DSA:3.30.360.10 181 364 9.5E-35 T 05-07-2017 AC028_RS11205 b891f18e496d17fa5f704cf965740317 369 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 38 162 3.9E-24 T 05-07-2017 IPR000683 Oxidoreductase, N-terminal GO:0016491 AC028_RS11205 b891f18e496d17fa5f704cf965740317 369 Gene3D G3DSA:3.40.50.720 33 180 8.4E-43 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS11205 b891f18e496d17fa5f704cf965740317 369 SUPERFAMILY SSF51735 29 191 1.55E-44 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS17085 7a59281cd7f599b684cabd86b5b67d79 130 SUPERFAMILY SSF46626 28 130 7.34E-25 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS17085 7a59281cd7f599b684cabd86b5b67d79 130 Pfam PF00034 Cytochrome c 30 130 6.1E-9 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS17085 7a59281cd7f599b684cabd86b5b67d79 130 Gene3D G3DSA:1.10.760.10 28 129 3.3E-31 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS17085 7a59281cd7f599b684cabd86b5b67d79 130 PRINTS PR00604 Class IA and IB cytochrome C signature 52 67 7.2E-13 T 05-07-2017 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS17085 7a59281cd7f599b684cabd86b5b67d79 130 PRINTS PR00604 Class IA and IB cytochrome C signature 120 128 7.2E-13 T 05-07-2017 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS17085 7a59281cd7f599b684cabd86b5b67d79 130 PRINTS PR00604 Class IA and IB cytochrome C signature 40 47 7.2E-13 T 05-07-2017 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS17085 7a59281cd7f599b684cabd86b5b67d79 130 PRINTS PR00604 Class IA and IB cytochrome C signature 83 99 7.2E-13 T 05-07-2017 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS17085 7a59281cd7f599b684cabd86b5b67d79 130 PRINTS PR00604 Class IA and IB cytochrome C signature 103 113 7.2E-13 T 05-07-2017 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS15810 838ae727b9dfa6cfaf56916000594b4f 564 SMART SM00267 386 546 2.0E-32 T 05-07-2017 IPR000160 GGDEF domain AC028_RS15810 838ae727b9dfa6cfaf56916000594b4f 564 Gene3D G3DSA:3.30.70.270 399 501 1.8E-34 T 05-07-2017 AC028_RS15810 838ae727b9dfa6cfaf56916000594b4f 564 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 393 500 3.3E-37 T 05-07-2017 IPR000160 GGDEF domain AC028_RS15810 838ae727b9dfa6cfaf56916000594b4f 564 Pfam PF00990 Diguanylate cyclase, GGDEF domain 398 500 6.4E-33 T 05-07-2017 IPR000160 GGDEF domain AC028_RS15810 838ae727b9dfa6cfaf56916000594b4f 564 SUPERFAMILY SSF55073 402 501 2.67E-31 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS15810 838ae727b9dfa6cfaf56916000594b4f 564 Pfam PF13185 GAF domain 253 385 1.8E-8 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS15810 838ae727b9dfa6cfaf56916000594b4f 564 Gene3D G3DSA:3.30.450.40 233 393 4.3E-11 T 05-07-2017 IPR029016 GAF domain-like AC028_RS15810 838ae727b9dfa6cfaf56916000594b4f 564 SUPERFAMILY SSF55781 254 396 1.0E-12 T 05-07-2017 IPR029016 GAF domain-like AC028_RS15810 838ae727b9dfa6cfaf56916000594b4f 564 SMART SM00065 254 394 0.0041 T 05-07-2017 IPR003018 GAF domain GO:0005515 AC028_RS15810 838ae727b9dfa6cfaf56916000594b4f 564 Pfam PF05227 CHASE3 domain 39 173 6.6E-31 T 05-07-2017 IPR007891 CHASE3 AC028_RS08810 000547234aac8deb42ad33a30634371d 71 SUPERFAMILY SSF55961 2 55 1.28E-6 T 05-07-2017 AC028_RS08810 000547234aac8deb42ad33a30634371d 71 Gene3D G3DSA:3.30.530.20 2 56 1.1E-6 T 05-07-2017 IPR023393 START-like domain AC028_RS05520 8546f7b2c2368398121e2104a5fd8602 389 Pfam PF13784 Fic/DOC family N-terminal 45 122 8.1E-26 T 05-07-2017 IPR025758 Fic/DOC N-terminal AC028_RS05520 8546f7b2c2368398121e2104a5fd8602 389 Pfam PF02661 Fic/DOC family 131 236 8.9E-20 T 05-07-2017 IPR003812 Fido domain AC028_RS05520 8546f7b2c2368398121e2104a5fd8602 389 SUPERFAMILY SSF140931 107 300 1.05E-45 T 05-07-2017 IPR003812 Fido domain AC028_RS05520 8546f7b2c2368398121e2104a5fd8602 389 PIRSF PIRSF038925 14 385 2.2E-105 T 05-07-2017 IPR026287 Adenosine monophosphate-protein transferase AC028_RS05520 8546f7b2c2368398121e2104a5fd8602 389 Gene3D G3DSA:1.10.3290.10 45 303 1.8E-62 T 05-07-2017 IPR003812 Fido domain AC028_RS19120 1d0831959327842a3b29745b9fd0e6c3 131 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 5 122 5.2E-35 T 05-07-2017 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AC028_RS19120 1d0831959327842a3b29745b9fd0e6c3 131 SUPERFAMILY SSF81343 4 125 2.18E-30 T 05-07-2017 AC028_RS19120 1d0831959327842a3b29745b9fd0e6c3 131 PIRSF PIRSF000178 1 125 2.1E-37 T 05-07-2017 AC028_RS19120 1d0831959327842a3b29745b9fd0e6c3 131 Gene3D G3DSA:1.20.1300.10 4 124 1.2E-36 T 05-07-2017 AC028_RS19120 1d0831959327842a3b29745b9fd0e6c3 131 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 4 119 3.4E-21 T 05-07-2017 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AC028_RS14495 06d28af0770837fc1508087bea4b788d 231 Gene3D G3DSA:3.90.550.10 2 221 8.0E-29 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS14495 06d28af0770837fc1508087bea4b788d 231 SUPERFAMILY SSF53448 2 201 3.09E-35 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS14495 06d28af0770837fc1508087bea4b788d 231 Pfam PF00535 Glycosyl transferase family 2 3 150 3.5E-16 T 05-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AC028_RS11985 42c60db965a060019d42d569d25a766c 378 Pfam PF00534 Glycosyl transferases group 1 189 344 2.0E-26 T 05-07-2017 IPR001296 Glycosyl transferase, family 1 AC028_RS11985 42c60db965a060019d42d569d25a766c 378 Gene3D G3DSA:3.40.50.2000 173 344 9.7E-24 T 05-07-2017 AC028_RS11985 42c60db965a060019d42d569d25a766c 378 Pfam PF13439 Glycosyltransferase Family 4 14 177 1.3E-24 T 05-07-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AC028_RS11985 42c60db965a060019d42d569d25a766c 378 SUPERFAMILY SSF53756 2 363 1.28E-75 T 05-07-2017 AC028_RS17910 d67ebdf33be3ab4a1496914a46411f73 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.6E-11 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS17910 d67ebdf33be3ab4a1496914a46411f73 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 9.6E-11 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS17910 d67ebdf33be3ab4a1496914a46411f73 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 9.6E-11 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS17910 d67ebdf33be3ab4a1496914a46411f73 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 7.2E-48 T 05-07-2017 AC028_RS17910 d67ebdf33be3ab4a1496914a46411f73 256 Gene3D G3DSA:3.40.50.720 7 252 1.8E-73 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS17910 d67ebdf33be3ab4a1496914a46411f73 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.4E-31 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS17910 d67ebdf33be3ab4a1496914a46411f73 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.4E-31 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS17910 d67ebdf33be3ab4a1496914a46411f73 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.4E-31 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS17910 d67ebdf33be3ab4a1496914a46411f73 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.4E-31 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS17910 d67ebdf33be3ab4a1496914a46411f73 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.4E-31 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS17910 d67ebdf33be3ab4a1496914a46411f73 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.4E-31 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS17910 d67ebdf33be3ab4a1496914a46411f73 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 199 0.0014 T 05-07-2017 AC028_RS17910 d67ebdf33be3ab4a1496914a46411f73 256 SUPERFAMILY SSF51735 7 252 2.12E-65 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS17910 d67ebdf33be3ab4a1496914a46411f73 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 05-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AC028_RS15460 a0b03633c674640623b146501eca8ef1 507 SMART SM00267 317 493 1.2E-51 T 05-07-2017 IPR000160 GGDEF domain AC028_RS15460 a0b03633c674640623b146501eca8ef1 507 Pfam PF00990 Diguanylate cyclase, GGDEF domain 328 489 1.6E-42 T 05-07-2017 IPR000160 GGDEF domain AC028_RS15460 a0b03633c674640623b146501eca8ef1 507 SUPERFAMILY SSF55073 333 494 4.39E-46 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS15460 a0b03633c674640623b146501eca8ef1 507 Pfam PF08668 HDOD domain 15 207 2.6E-57 T 05-07-2017 IPR013976 Metal-dependent hydrolase HDOD AC028_RS15460 a0b03633c674640623b146501eca8ef1 507 Gene3D G3DSA:1.10.3150.10 3 271 1.4E-70 T 05-07-2017 IPR013976 Metal-dependent hydrolase HDOD AC028_RS15460 a0b03633c674640623b146501eca8ef1 507 SUPERFAMILY SSF109604 4 269 5.78E-59 T 05-07-2017 AC028_RS15460 a0b03633c674640623b146501eca8ef1 507 Gene3D G3DSA:3.30.70.270 330 495 2.2E-52 T 05-07-2017 AC028_RS15460 a0b03633c674640623b146501eca8ef1 507 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 324 492 2.6E-48 T 05-07-2017 IPR000160 GGDEF domain AC028_RS12190 7540ac2e491ab353f92df58f36aaa0a2 146 Pfam PF02391 MoaE protein 12 123 1.1E-35 T 05-07-2017 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AC028_RS12190 7540ac2e491ab353f92df58f36aaa0a2 146 SUPERFAMILY SSF54690 9 142 3.14E-44 T 05-07-2017 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AC028_RS12190 7540ac2e491ab353f92df58f36aaa0a2 146 Gene3D G3DSA:3.90.1170.40 4 139 1.1E-46 T 05-07-2017 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AC028_RS20295 235d2a876153031b7891187b72f9c34b 277 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 212 226 - T 05-07-2017 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AC028_RS20295 235d2a876153031b7891187b72f9c34b 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 178 199 1.5E-55 T 05-07-2017 IPR000760 Inositol monophosphatase GO:0046854 AC028_RS20295 235d2a876153031b7891187b72f9c34b 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 1.5E-55 T 05-07-2017 IPR000760 Inositol monophosphatase GO:0046854 AC028_RS20295 235d2a876153031b7891187b72f9c34b 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 1.5E-55 T 05-07-2017 IPR000760 Inositol monophosphatase GO:0046854 AC028_RS20295 235d2a876153031b7891187b72f9c34b 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 209 233 1.5E-55 T 05-07-2017 IPR000760 Inositol monophosphatase GO:0046854 AC028_RS20295 235d2a876153031b7891187b72f9c34b 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 131 154 1.5E-55 T 05-07-2017 IPR000760 Inositol monophosphatase GO:0046854 AC028_RS20295 235d2a876153031b7891187b72f9c34b 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 82 98 1.5E-55 T 05-07-2017 IPR000760 Inositol monophosphatase GO:0046854 AC028_RS20295 235d2a876153031b7891187b72f9c34b 277 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 82 95 - T 05-07-2017 IPR020583 Inositol monophosphatase, metal-binding site AC028_RS20295 235d2a876153031b7891187b72f9c34b 277 SUPERFAMILY SSF56655 5 264 1.44E-77 T 05-07-2017 AC028_RS20295 235d2a876153031b7891187b72f9c34b 277 Gene3D G3DSA:3.40.190.80 152 265 4.7E-35 T 05-07-2017 AC028_RS20295 235d2a876153031b7891187b72f9c34b 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 105 124 1.1E-20 T 05-07-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AC028_RS20295 235d2a876153031b7891187b72f9c34b 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 18 40 1.1E-20 T 05-07-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AC028_RS20295 235d2a876153031b7891187b72f9c34b 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 199 211 1.1E-20 T 05-07-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AC028_RS20295 235d2a876153031b7891187b72f9c34b 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 157 183 1.1E-20 T 05-07-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AC028_RS20295 235d2a876153031b7891187b72f9c34b 277 Pfam PF00459 Inositol monophosphatase family 4 253 9.6E-64 T 05-07-2017 IPR000760 Inositol monophosphatase GO:0046854 AC028_RS20295 235d2a876153031b7891187b72f9c34b 277 Gene3D G3DSA:3.30.540.10 5 151 1.9E-47 T 05-07-2017 AC028_RS08105 bb6db8a73c8e6ea4a85a7faba0aa1076 238 Gene3D G3DSA:3.40.50.1000 97 231 6.6E-23 T 05-07-2017 IPR023214 HAD-like domain AC028_RS08105 bb6db8a73c8e6ea4a85a7faba0aa1076 238 Pfam PF12710 haloacid dehalogenase-like hydrolase 15 197 2.3E-25 T 05-07-2017 AC028_RS08105 bb6db8a73c8e6ea4a85a7faba0aa1076 238 SUPERFAMILY SSF56784 13 215 7.17E-21 T 05-07-2017 IPR023214 HAD-like domain AC028_RS17445 ac48c7cb08a1eecd437816dbdfab62f2 223 Pfam PF06912 Protein of unknown function (DUF1275) 13 205 6.0E-35 T 05-07-2017 IPR010699 Protein of unknown function DUF1275 AC028_RS20500 b3eeda73ece9d570dc4faffd64332f01 206 Gene3D G3DSA:3.10.300.10 4 194 1.1E-64 T 05-07-2017 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AC028_RS20500 b3eeda73ece9d570dc4faffd64332f01 206 SUPERFAMILY SSF50486 4 195 1.8E-62 T 05-07-2017 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AC028_RS20500 b3eeda73ece9d570dc4faffd64332f01 206 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 10 186 4.7E-61 T 05-07-2017 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AC028_RS20500 b3eeda73ece9d570dc4faffd64332f01 206 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 6 190 9.6E-53 T 05-07-2017 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AC028_RS20500 b3eeda73ece9d570dc4faffd64332f01 206 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 8 190 31.328 T 05-07-2017 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AC028_RS03035 7bfeb8f0364a80e2139bf2ec08f11756 271 Pfam PF01670 Glycosyl hydrolase family 12 90 260 5.4E-18 T 05-07-2017 IPR002594 Glycoside hydrolase family 12 GO:0000272|GO:0008810 AC028_RS03035 7bfeb8f0364a80e2139bf2ec08f11756 271 Gene3D G3DSA:2.60.120.180 46 266 3.8E-50 T 05-07-2017 IPR013319 Glycoside hydrolase family 11/12 GO:0004553 MetaCyc: PWY-6784 AC028_RS03035 7bfeb8f0364a80e2139bf2ec08f11756 271 SUPERFAMILY SSF49899 42 265 1.72E-51 T 05-07-2017 IPR013320 Concanavalin A-like lectin/glucanase domain AC028_RS05850 a2ed1c06654775845f45c865df5e4d8a 284 PIRSF PIRSF031679 9 284 1.2E-112 T 05-07-2017 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted AC028_RS05850 a2ed1c06654775845f45c865df5e4d8a 284 Gene3D G3DSA:3.40.50.150 57 243 8.3E-13 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS05850 a2ed1c06654775845f45c865df5e4d8a 284 SUPERFAMILY SSF53335 58 248 8.53E-14 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS08605 e667817d1d549580d6d66003cdabc86b 299 Pfam PF00106 short chain dehydrogenase 3 192 4.4E-38 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS08605 e667817d1d549580d6d66003cdabc86b 299 Gene3D G3DSA:3.40.50.720 2 251 1.4E-51 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS08605 e667817d1d549580d6d66003cdabc86b 299 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 190 0.0094 T 05-07-2017 AC028_RS08605 e667817d1d549580d6d66003cdabc86b 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.8E-19 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS08605 e667817d1d549580d6d66003cdabc86b 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 5.8E-19 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS08605 e667817d1d549580d6d66003cdabc86b 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 5.8E-19 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS08605 e667817d1d549580d6d66003cdabc86b 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.8E-19 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS08605 e667817d1d549580d6d66003cdabc86b 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 5.8E-19 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS08605 e667817d1d549580d6d66003cdabc86b 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.8E-19 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS08605 e667817d1d549580d6d66003cdabc86b 299 SUPERFAMILY SSF51735 3 220 1.91E-50 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS22110 de8e7c206689028fef37ecfc69ac1b8a 330 Gene3D G3DSA:3.40.190.10 96 178 6.8E-29 T 05-07-2017 AC028_RS22110 de8e7c206689028fef37ecfc69ac1b8a 330 Gene3D G3DSA:1.10.10.10 2 83 5.6E-23 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS22110 de8e7c206689028fef37ecfc69ac1b8a 330 Pfam PF03466 LysR substrate binding domain 95 291 1.3E-39 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS22110 de8e7c206689028fef37ecfc69ac1b8a 330 SUPERFAMILY SSF53850 96 295 3.8E-41 T 05-07-2017 AC028_RS22110 de8e7c206689028fef37ecfc69ac1b8a 330 SUPERFAMILY SSF46785 8 84 9.79E-20 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS22110 de8e7c206689028fef37ecfc69ac1b8a 330 Gene3D G3DSA:3.40.190.10 179 259 1.7E-15 T 05-07-2017 AC028_RS22110 de8e7c206689028fef37ecfc69ac1b8a 330 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 2.0E-18 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS22110 de8e7c206689028fef37ecfc69ac1b8a 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 7.0E-6 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS22110 de8e7c206689028fef37ecfc69ac1b8a 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 7.0E-6 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS22110 de8e7c206689028fef37ecfc69ac1b8a 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 7.0E-6 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS16895 072f48f8726703cf5fbe888c1b3e104b 234 SUPERFAMILY SSF64288 52 229 5.34E-32 T 05-07-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AC028_RS16895 072f48f8726703cf5fbe888c1b3e104b 234 SUPERFAMILY SSF46785 1 68 3.16E-20 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS16895 072f48f8726703cf5fbe888c1b3e104b 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 24 38 2.2E-5 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS16895 072f48f8726703cf5fbe888c1b3e104b 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 54 2.2E-5 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS16895 072f48f8726703cf5fbe888c1b3e104b 234 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 1 231 9.5E-93 T 05-07-2017 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 AC028_RS16895 072f48f8726703cf5fbe888c1b3e104b 234 SMART SM00866 87 224 4.5E-24 T 05-07-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AC028_RS16895 072f48f8726703cf5fbe888c1b3e104b 234 Gene3D G3DSA:3.40.1410.10 84 219 1.2E-37 T 05-07-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AC028_RS16895 072f48f8726703cf5fbe888c1b3e104b 234 Pfam PF07702 UTRA domain 88 223 3.9E-26 T 05-07-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AC028_RS16895 072f48f8726703cf5fbe888c1b3e104b 234 Gene3D G3DSA:1.10.10.10 1 70 4.1E-24 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS16895 072f48f8726703cf5fbe888c1b3e104b 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 64 5.7E-19 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS16895 072f48f8726703cf5fbe888c1b3e104b 234 SMART SM00345 5 64 1.0E-17 T 05-07-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AC028_RS10560 626c641ca7a0249484d33a2659bfa603 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 5 116 21.808 T 05-07-2017 IPR003509 Uncharacterised protein family UPF0102 AC028_RS10560 626c641ca7a0249484d33a2659bfa603 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 101 1.7E-21 T 05-07-2017 IPR003509 Uncharacterised protein family UPF0102 AC028_RS10560 626c641ca7a0249484d33a2659bfa603 122 SUPERFAMILY SSF52980 7 105 1.19E-15 T 05-07-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AC028_RS10560 626c641ca7a0249484d33a2659bfa603 122 Gene3D G3DSA:3.40.1350.10 13 121 9.3E-32 T 05-07-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 AC028_RS10560 626c641ca7a0249484d33a2659bfa603 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 6 118 7.8E-33 T 05-07-2017 IPR003509 Uncharacterised protein family UPF0102 AC028_RS04960 8569bf9092fcedc122e98fa45785cc4b 179 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 4 179 2.0E-57 T 05-07-2017 IPR011517 RNA polymerase sigma-70 ECF-like AC028_RS04960 8569bf9092fcedc122e98fa45785cc4b 179 Gene3D G3DSA:1.10.10.10 122 179 1.2E-6 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS04960 8569bf9092fcedc122e98fa45785cc4b 179 SUPERFAMILY SSF88659 121 178 2.3E-7 T 05-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS04960 8569bf9092fcedc122e98fa45785cc4b 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 178 1.1E-15 T 05-07-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS04960 8569bf9092fcedc122e98fa45785cc4b 179 Gene3D G3DSA:1.10.1740.10 2 103 9.1E-5 T 05-07-2017 AC028_RS04960 8569bf9092fcedc122e98fa45785cc4b 179 Pfam PF07638 ECF sigma factor 6 179 3.8E-30 T 05-07-2017 IPR011517 RNA polymerase sigma-70 ECF-like AC028_RS04960 8569bf9092fcedc122e98fa45785cc4b 179 SUPERFAMILY SSF88946 2 104 1.92E-8 T 05-07-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS18270 3b52cc1300472581d06ffff53ea65ec5 568 Gene3D G3DSA:3.40.50.300 169 315 1.2E-7 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18270 3b52cc1300472581d06ffff53ea65ec5 568 SUPERFAMILY SSF52540 165 324 1.98E-11 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS18270 3b52cc1300472581d06ffff53ea65ec5 568 SMART SM00382 196 323 0.0053 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS20540 4fee7734a059fd119a52b67bb5463362 419 SUPERFAMILY SSF81342 24 292 6.75E-95 T 05-07-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AC028_RS20540 4fee7734a059fd119a52b67bb5463362 419 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 290 393 5.3E-38 T 05-07-2017 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AC028_RS20540 4fee7734a059fd119a52b67bb5463362 419 SUPERFAMILY SSF81648 294 409 2.4E-31 T 05-07-2017 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AC028_RS20540 4fee7734a059fd119a52b67bb5463362 419 Pfam PF00033 Cytochrome b/b6/petB 32 220 3.9E-68 T 05-07-2017 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AC028_RS20540 4fee7734a059fd119a52b67bb5463362 419 Gene3D G3DSA:1.20.810.10 23 414 6.6E-157 T 05-07-2017 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 AC028_RS20540 4fee7734a059fd119a52b67bb5463362 419 PIRSF PIRSF038885 5 419 4.7E-155 T 05-07-2017 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 AC028_RS13170 d1274f8c2210d89a4099fe627537ffd7 274 Gene3D G3DSA:3.40.50.150 74 270 6.9E-54 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS13170 d1274f8c2210d89a4099fe627537ffd7 274 SMART SM00138 8 271 1.8E-28 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS13170 d1274f8c2210d89a4099fe627537ffd7 274 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 61 4.7E-9 T 05-07-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AC028_RS13170 d1274f8c2210d89a4099fe627537ffd7 274 SUPERFAMILY SSF53335 75 253 2.53E-38 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS13170 d1274f8c2210d89a4099fe627537ffd7 274 PRINTS PR00996 Glutamate methyltransferase family signature 103 123 9.6E-21 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS13170 d1274f8c2210d89a4099fe627537ffd7 274 PRINTS PR00996 Glutamate methyltransferase family signature 135 151 9.6E-21 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS13170 d1274f8c2210d89a4099fe627537ffd7 274 PRINTS PR00996 Glutamate methyltransferase family signature 228 251 9.6E-21 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS13170 d1274f8c2210d89a4099fe627537ffd7 274 PRINTS PR00996 Glutamate methyltransferase family signature 209 223 9.6E-21 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS13170 d1274f8c2210d89a4099fe627537ffd7 274 PRINTS PR00996 Glutamate methyltransferase family signature 67 79 9.6E-21 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS13170 d1274f8c2210d89a4099fe627537ffd7 274 Pfam PF01739 CheR methyltransferase, SAM binding domain 75 262 1.8E-35 T 05-07-2017 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AC028_RS19515 e46d535de1100380192fc6179881344f 603 SUPERFAMILY SSF141868 353 595 1.27E-75 T 05-07-2017 IPR001633 EAL domain AC028_RS19515 e46d535de1100380192fc6179881344f 603 SUPERFAMILY SSF55073 180 320 9.42E-8 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS19515 e46d535de1100380192fc6179881344f 603 SMART SM00052 343 588 6.5E-90 T 05-07-2017 IPR001633 EAL domain AC028_RS19515 e46d535de1100380192fc6179881344f 603 Gene3D G3DSA:3.20.20.450 350 595 9.2E-82 T 05-07-2017 IPR001633 EAL domain AC028_RS19515 e46d535de1100380192fc6179881344f 603 Pfam PF00563 EAL domain 351 583 2.1E-65 T 05-07-2017 IPR001633 EAL domain AC028_RS19515 e46d535de1100380192fc6179881344f 603 Gene3D G3DSA:3.30.70.270 177 335 1.8E-9 T 05-07-2017 AC028_RS19515 e46d535de1100380192fc6179881344f 603 SUPERFAMILY SSF55781 38 168 4.71E-7 T 05-07-2017 IPR029016 GAF domain-like AC028_RS19515 e46d535de1100380192fc6179881344f 603 Gene3D G3DSA:3.30.450.40 38 168 2.8E-5 T 05-07-2017 IPR029016 GAF domain-like AC028_RS16180 c07ce466e849e85b316b352157e4c694 554 PIRSF PIRSF003128 1 554 7.1E-146 T 05-07-2017 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AC028_RS16180 c07ce466e849e85b316b352157e4c694 554 SUPERFAMILY SSF52540 286 507 2.85E-55 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS16180 c07ce466e849e85b316b352157e4c694 554 SUPERFAMILY SSF52540 1 198 2.85E-55 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS16180 c07ce466e849e85b316b352157e4c694 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 1.9E-145 T 05-07-2017 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AC028_RS16180 c07ce466e849e85b316b352157e4c694 554 Gene3D G3DSA:3.40.50.300 419 497 6.0E-5 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS16180 c07ce466e849e85b316b352157e4c694 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 507 9.8E-20 T 05-07-2017 IPR003395 RecF/RecN/SMC, N-terminal AC028_RS16180 c07ce466e849e85b316b352157e4c694 554 Gene3D G3DSA:3.40.50.300 1 203 8.4E-60 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS03515 6e9945e3e8bfff31a2d1cbc63e6f9c5d 57 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.5E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS03515 6e9945e3e8bfff31a2d1cbc63e6f9c5d 57 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.5E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS03515 6e9945e3e8bfff31a2d1cbc63e6f9c5d 57 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.5E-9 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS03515 6e9945e3e8bfff31a2d1cbc63e6f9c5d 57 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 54 5.8E-16 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS03515 6e9945e3e8bfff31a2d1cbc63e6f9c5d 57 SUPERFAMILY SSF46785 1 54 4.9E-15 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS03515 6e9945e3e8bfff31a2d1cbc63e6f9c5d 57 Gene3D G3DSA:1.10.10.10 1 54 7.3E-19 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS00035 a456e310da26d1004e2d8cdd005cf592 249 SUPERFAMILY SSF53254 2 246 2.49E-78 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS00035 a456e310da26d1004e2d8cdd005cf592 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 124 5.3E-29 T 05-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 AC028_RS00035 a456e310da26d1004e2d8cdd005cf592 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 139 209 4.8E-5 T 05-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 AC028_RS00035 a456e310da26d1004e2d8cdd005cf592 249 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 2 229 44.744 T 05-07-2017 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 AC028_RS00035 a456e310da26d1004e2d8cdd005cf592 249 Gene3D G3DSA:3.40.50.1240 2 249 1.4E-96 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS00035 a456e310da26d1004e2d8cdd005cf592 249 SMART SM00855 4 190 9.5E-26 T 05-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 AC028_RS00035 a456e310da26d1004e2d8cdd005cf592 249 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 4 247 1.1E-121 T 05-07-2017 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 AC028_RS00035 a456e310da26d1004e2d8cdd005cf592 249 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 05-07-2017 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 AC028_RS04230 2f882faee63a0026c4a0d50ae2d8ff73 262 SUPERFAMILY SSF52317 32 251 1.1E-41 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS04230 2f882faee63a0026c4a0d50ae2d8ff73 262 Pfam PF06283 Trehalose utilisation 23 243 5.7E-57 T 05-07-2017 IPR029010 ThuA-like domain AC028_RS04230 2f882faee63a0026c4a0d50ae2d8ff73 262 Gene3D G3DSA:3.40.50.880 22 254 1.3E-37 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS19435 b352855fba4117f21e4bde601ebe3be1 346 SUPERFAMILY SSF63829 22 301 3.92E-13 T 05-07-2017 AC028_RS19435 b352855fba4117f21e4bde601ebe3be1 346 Gene3D G3DSA:2.120.10.30 4 332 6.5E-77 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS19435 b352855fba4117f21e4bde601ebe3be1 346 Pfam PF03022 Major royal jelly protein 67 282 3.0E-16 T 05-07-2017 IPR017996 Major royal jelly protein/protein yellow AC028_RS20665 c6d5b881415b629ab47b03add3360ee3 251 Pfam PF07722 Peptidase C26 5 222 2.6E-68 T 05-07-2017 IPR011697 Peptidase C26 GO:0006541|GO:0016787 AC028_RS20665 c6d5b881415b629ab47b03add3360ee3 251 SUPERFAMILY SSF52317 27 245 1.54E-36 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS20665 c6d5b881415b629ab47b03add3360ee3 251 Gene3D G3DSA:3.40.50.880 26 248 6.3E-37 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS19185 48712d23e5dad6c0c8f2d9aca2f5b02e 589 Gene3D G3DSA:3.40.50.300 344 577 3.9E-81 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19185 48712d23e5dad6c0c8f2d9aca2f5b02e 589 SUPERFAMILY SSF90123 18 332 1.03E-65 T 05-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AC028_RS19185 48712d23e5dad6c0c8f2d9aca2f5b02e 589 SMART SM00382 372 559 7.9E-18 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS19185 48712d23e5dad6c0c8f2d9aca2f5b02e 589 Pfam PF00664 ABC transporter transmembrane region 32 298 2.8E-39 T 05-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AC028_RS19185 48712d23e5dad6c0c8f2d9aca2f5b02e 589 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 16 586 2.7E-239 T 05-07-2017 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 AC028_RS19185 48712d23e5dad6c0c8f2d9aca2f5b02e 589 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS19185 48712d23e5dad6c0c8f2d9aca2f5b02e 589 SUPERFAMILY SSF52540 335 584 1.54E-87 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19185 48712d23e5dad6c0c8f2d9aca2f5b02e 589 Pfam PF00005 ABC transporter 363 513 1.0E-31 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS19185 48712d23e5dad6c0c8f2d9aca2f5b02e 589 Gene3D G3DSA:1.20.1560.10 18 333 3.6E-64 T 05-07-2017 AC028_RS02505 2204f31a54907f8b19660b7c4eba32cd 312 SUPERFAMILY SSF53590 4 309 2.49E-87 T 05-07-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AC028_RS02505 2204f31a54907f8b19660b7c4eba32cd 312 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 6 301 3.4E-64 T 05-07-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AC028_RS02505 2204f31a54907f8b19660b7c4eba32cd 312 Gene3D G3DSA:3.90.245.10 4 309 2.7E-92 T 05-07-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AC028_RS15515 0729aabc6bf5189934018e2ac2f77f36 285 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 13 79 3.6E-22 T 05-07-2017 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 AC028_RS15515 0729aabc6bf5189934018e2ac2f77f36 285 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 142 176 5.9E-5 T 05-07-2017 IPR001451 Hexapeptide repeat AC028_RS15515 0729aabc6bf5189934018e2ac2f77f36 285 Gene3D G3DSA:1.10.166.10 12 80 9.5E-28 T 05-07-2017 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 AC028_RS15515 0729aabc6bf5189934018e2ac2f77f36 285 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 16 282 3.8E-129 T 05-07-2017 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AC028_RS15515 0729aabc6bf5189934018e2ac2f77f36 285 Gene3D G3DSA:2.160.10.10 99 264 8.1E-59 T 05-07-2017 AC028_RS15515 0729aabc6bf5189934018e2ac2f77f36 285 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 10 282 54.481 T 05-07-2017 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AC028_RS15515 0729aabc6bf5189934018e2ac2f77f36 285 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 185 219 4.3E-11 T 05-07-2017 IPR001451 Hexapeptide repeat AC028_RS15515 0729aabc6bf5189934018e2ac2f77f36 285 SUPERFAMILY SSF51161 16 266 1.03E-71 T 05-07-2017 IPR011004 Trimeric LpxA-like AC028_RS15255 9e4df8994750108045c423cfc172939e 214 SUPERFAMILY SSF159594 34 205 2.62E-44 T 05-07-2017 AC028_RS15255 9e4df8994750108045c423cfc172939e 214 Gene3D G3DSA:3.40.50.10610 22 211 2.4E-64 T 05-07-2017 IPR005586 ABC-type transport auxiliary lipoprotein component AC028_RS15255 9e4df8994750108045c423cfc172939e 214 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 35 195 3.1E-37 T 05-07-2017 IPR005586 ABC-type transport auxiliary lipoprotein component AC028_RS15090 a1d8e57e1abba8230a084c0d083a5374 395 SUPERFAMILY SSF53383 20 394 1.31E-127 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS15090 a1d8e57e1abba8230a084c0d083a5374 395 Gene3D G3DSA:3.90.1150.10 260 394 9.2E-57 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS15090 a1d8e57e1abba8230a084c0d083a5374 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 18 393 7.4E-163 T 05-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AC028_RS15090 a1d8e57e1abba8230a084c0d083a5374 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 05-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AC028_RS15090 a1d8e57e1abba8230a084c0d083a5374 395 PIRSF PIRSF001434 3 395 6.0E-151 T 05-07-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AC028_RS15090 a1d8e57e1abba8230a084c0d083a5374 395 Gene3D G3DSA:3.40.640.10 16 259 6.9E-99 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS13485 0572f769173f306ca585a533c77190a6 240 SUPERFAMILY SSF53448 1 228 7.03E-39 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS13485 0572f769173f306ca585a533c77190a6 240 Gene3D G3DSA:3.90.550.10 4 208 1.6E-22 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS13485 0572f769173f306ca585a533c77190a6 240 Pfam PF00535 Glycosyl transferase family 2 7 168 5.0E-23 T 05-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AC028_RS15665 6bcaf7276f7a784bdb48596ecbef0b5d 211 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 70 9.0E-13 T 05-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AC028_RS15665 6bcaf7276f7a784bdb48596ecbef0b5d 211 Pfam PF14497 Glutathione S-transferase, C-terminal domain 111 199 5.7E-7 T 05-07-2017 IPR004046 Glutathione S-transferase, C-terminal AC028_RS15665 6bcaf7276f7a784bdb48596ecbef0b5d 211 SUPERFAMILY SSF52833 3 84 3.16E-21 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS15665 6bcaf7276f7a784bdb48596ecbef0b5d 211 SUPERFAMILY SSF47616 82 202 3.76E-22 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS15665 6bcaf7276f7a784bdb48596ecbef0b5d 211 Gene3D G3DSA:1.20.1050.10 89 195 2.3E-23 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS15665 6bcaf7276f7a784bdb48596ecbef0b5d 211 Gene3D G3DSA:3.40.30.10 4 88 2.6E-27 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS14325 05a7415a6d172f04e57d7a086f05233e 387 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 152 8.6E-29 T 05-07-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AC028_RS14325 05a7415a6d172f04e57d7a086f05233e 387 Gene3D G3DSA:3.90.180.10 1 188 5.3E-54 T 05-07-2017 IPR011032 GroES-like AC028_RS14325 05a7415a6d172f04e57d7a086f05233e 387 SUPERFAMILY SSF50129 1 196 2.13E-57 T 05-07-2017 IPR011032 GroES-like AC028_RS14325 05a7415a6d172f04e57d7a086f05233e 387 Pfam PF00107 Zinc-binding dehydrogenase 197 283 1.0E-8 T 05-07-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AC028_RS14325 05a7415a6d172f04e57d7a086f05233e 387 SUPERFAMILY SSF51735 164 349 1.73E-60 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS14325 05a7415a6d172f04e57d7a086f05233e 387 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 20 1.2E-8 T 05-07-2017 IPR027399 Alcohol dehydrogenase GroES-associated AC028_RS14325 05a7415a6d172f04e57d7a086f05233e 387 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 05-07-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AC028_RS14325 05a7415a6d172f04e57d7a086f05233e 387 Gene3D G3DSA:3.40.50.720 189 329 6.8E-35 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS00160 62026660f8f470b03bab4c532ae8b13b 176 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 36.083 T 05-07-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AC028_RS00160 62026660f8f470b03bab4c532ae8b13b 176 SUPERFAMILY SSF50249 3 176 2.19E-57 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS00160 62026660f8f470b03bab4c532ae8b13b 176 Pfam PF00436 Single-strand binding protein family 5 108 4.2E-39 T 05-07-2017 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AC028_RS00160 62026660f8f470b03bab4c532ae8b13b 176 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 176 1.6E-49 T 05-07-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AC028_RS00160 62026660f8f470b03bab4c532ae8b13b 176 Gene3D G3DSA:2.40.50.140 1 122 2.0E-51 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS00160 62026660f8f470b03bab4c532ae8b13b 176 Gene3D G3DSA:2.40.50.140 156 176 2.0E-51 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS20030 738435d49a774673f402f67117d30995 809 TIGRFAM TIGR04346 DotA_TraY: conjugal transfer/type IV secretion protein DotA/TraY 1 686 4.0E-137 T 05-07-2017 IPR027628 Conjugal transfer/type IV secretion protein DotA/TraY AC028_RS01695 64704cf51bad7f15f1296559955e2ff6 275 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS01695 64704cf51bad7f15f1296559955e2ff6 275 Gene3D G3DSA:3.40.50.300 10 209 1.4E-61 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01695 64704cf51bad7f15f1296559955e2ff6 275 SUPERFAMILY SSF52540 10 210 6.55E-63 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01695 64704cf51bad7f15f1296559955e2ff6 275 Pfam PF00005 ABC transporter 25 158 1.5E-30 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS01695 64704cf51bad7f15f1296559955e2ff6 275 SMART SM00382 34 208 1.4E-16 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS09705 00962d5e36da3136d3890545247b5d7a 300 Gene3D G3DSA:1.20.58.340 224 300 1.7E-22 T 05-07-2017 AC028_RS09705 00962d5e36da3136d3890545247b5d7a 300 SUPERFAMILY SSF143865 9 233 1.96E-29 T 05-07-2017 AC028_RS09705 00962d5e36da3136d3890545247b5d7a 300 SUPERFAMILY SSF144083 235 297 6.15E-17 T 05-07-2017 AC028_RS09705 00962d5e36da3136d3890545247b5d7a 300 Pfam PF01544 CorA-like Mg2+ transporter protein 10 296 9.3E-54 T 05-07-2017 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AC028_RS14240 027f75685bd58acb5bd19340a5fcf464 142 SUPERFAMILY SSF53850 22 139 1.05E-15 T 05-07-2017 AC028_RS14240 027f75685bd58acb5bd19340a5fcf464 142 Gene3D G3DSA:3.40.190.10 26 139 2.0E-13 T 05-07-2017 AC028_RS14240 027f75685bd58acb5bd19340a5fcf464 142 Pfam PF12849 PBP superfamily domain 25 134 3.2E-8 T 05-07-2017 IPR024370 PBP domain AC028_RS03520 bc1c80d5df64581d07d90c409fdacd13 81 SUPERFAMILY SSF103473 5 71 8.63E-7 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS03520 bc1c80d5df64581d07d90c409fdacd13 81 Gene3D G3DSA:1.20.1250.20 7 71 4.9E-4 T 05-07-2017 AC028_RS03080 e0912d67084cd35ef0790878b5c7eb9b 788 PRINTS PR01440 Cellulose synthase subunit B signature 231 254 1.6E-37 T 05-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AC028_RS03080 e0912d67084cd35ef0790878b5c7eb9b 788 PRINTS PR01440 Cellulose synthase subunit B signature 275 292 1.6E-37 T 05-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AC028_RS03080 e0912d67084cd35ef0790878b5c7eb9b 788 PRINTS PR01440 Cellulose synthase subunit B signature 189 210 1.6E-37 T 05-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AC028_RS03080 e0912d67084cd35ef0790878b5c7eb9b 788 PRINTS PR01440 Cellulose synthase subunit B signature 567 587 1.6E-37 T 05-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AC028_RS03080 e0912d67084cd35ef0790878b5c7eb9b 788 PRINTS PR01440 Cellulose synthase subunit B signature 399 420 1.6E-37 T 05-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AC028_RS03080 e0912d67084cd35ef0790878b5c7eb9b 788 PRINTS PR01440 Cellulose synthase subunit B signature 727 747 1.6E-37 T 05-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AC028_RS03080 e0912d67084cd35ef0790878b5c7eb9b 788 PRINTS PR01440 Cellulose synthase subunit B signature 99 120 1.6E-37 T 05-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AC028_RS03080 e0912d67084cd35ef0790878b5c7eb9b 788 PRINTS PR01440 Cellulose synthase subunit B signature 530 549 1.6E-37 T 05-07-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 AC028_RS03080 e0912d67084cd35ef0790878b5c7eb9b 788 Pfam PF03170 Bacterial cellulose synthase subunit 72 687 2.8E-206 T 05-07-2017 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 AC028_RS01655 0aa252e7a7750507942a71588db9f5dd 327 SUPERFAMILY SSF53383 3 325 2.72E-51 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS01655 0aa252e7a7750507942a71588db9f5dd 327 Gene3D G3DSA:3.40.640.10 44 232 9.4E-42 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS01655 0aa252e7a7750507942a71588db9f5dd 327 Pfam PF00155 Aminotransferase class I and II 54 308 2.2E-27 T 05-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AC028_RS01655 0aa252e7a7750507942a71588db9f5dd 327 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 189 202 - T 05-07-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AC028_RS01655 0aa252e7a7750507942a71588db9f5dd 327 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 4 323 5.2E-109 T 05-07-2017 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 AC028_RS01655 0aa252e7a7750507942a71588db9f5dd 327 Gene3D G3DSA:3.90.1150.10 233 304 1.3E-5 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS21505 6f40323cb488feb62daac6b0984da1a4 89 Gene3D G3DSA:2.20.25.10 9 77 3.7E-6 T 05-07-2017 AC028_RS21505 6f40323cb488feb62daac6b0984da1a4 89 SUPERFAMILY SSF158997 52 80 3.4E-7 T 05-07-2017 AC028_RS21505 6f40323cb488feb62daac6b0984da1a4 89 SUPERFAMILY SSF158997 1 24 3.4E-7 T 05-07-2017 AC028_RS21505 6f40323cb488feb62daac6b0984da1a4 89 Pfam PF03966 Trm112p-like protein 2 68 2.4E-8 T 05-07-2017 IPR005651 Uncharacterised protein family UPF0434/Trm112 AC028_RS16955 a4e0eb2e39a5a51697577c7d6c5ac682 255 Gene3D G3DSA:3.30.1150.10 174 254 7.8E-17 T 05-07-2017 AC028_RS16955 a4e0eb2e39a5a51697577c7d6c5ac682 255 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 177 253 2.0E-23 T 05-07-2017 IPR006260 TonB, C-terminal GO:0006810 AC028_RS16955 a4e0eb2e39a5a51697577c7d6c5ac682 255 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 175 252 5.7E-24 T 05-07-2017 IPR006260 TonB, C-terminal GO:0006810 AC028_RS16955 a4e0eb2e39a5a51697577c7d6c5ac682 255 SUPERFAMILY SSF74653 174 251 2.22E-22 T 05-07-2017 AC028_RS18960 8711708cbb91ae5820ee6823dda86d17 169 Pfam PF06853 Protein of unknown function (DUF1249) 31 145 2.4E-27 T 05-07-2017 IPR009659 Protein of unknown function DUF1249 AC028_RS06235 d8635bf4b157befd87b80c727cde5f59 358 SUPERFAMILY SSF55961 105 352 2.36E-49 T 05-07-2017 AC028_RS06235 d8635bf4b157befd87b80c727cde5f59 358 SUPERFAMILY SSF50022 9 118 2.75E-29 T 05-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AC028_RS06235 d8635bf4b157befd87b80c727cde5f59 358 Gene3D G3DSA:2.102.10.10 11 124 3.7E-29 T 05-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AC028_RS06235 d8635bf4b157befd87b80c727cde5f59 358 Pfam PF00355 Rieske [2Fe-2S] domain 13 93 3.8E-14 T 05-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AC028_RS04270 5dfd135c828ecccb03d79eedc900de99 302 TIGRFAM TIGR00688 rarD: protein RarD 11 264 4.1E-61 T 05-07-2017 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 AC028_RS04270 5dfd135c828ecccb03d79eedc900de99 302 SUPERFAMILY SSF103481 55 148 1.27E-11 T 05-07-2017 AC028_RS04270 5dfd135c828ecccb03d79eedc900de99 302 SUPERFAMILY SSF103481 212 289 2.35E-11 T 05-07-2017 AC028_RS04270 5dfd135c828ecccb03d79eedc900de99 302 Pfam PF00892 EamA-like transporter family 12 147 1.8E-12 T 05-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AC028_RS04270 5dfd135c828ecccb03d79eedc900de99 302 Pfam PF00892 EamA-like transporter family 156 288 1.6E-7 T 05-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AC028_RS05130 3d573361437a44426708cc281a2a9e63 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 45 318 3.4E-70 T 05-07-2017 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AC028_RS05130 3d573361437a44426708cc281a2a9e63 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 46 276 1.8E-56 T 05-07-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AC028_RS05130 3d573361437a44426708cc281a2a9e63 332 PIRSF PIRSF006470 6 328 8.6E-74 T 05-07-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AC028_RS07935 aa960af9cf315473d3a1d467c368bbf2 327 SMART SM00861 5 180 2.3E-58 T 05-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain AC028_RS07935 aa960af9cf315473d3a1d467c368bbf2 327 Gene3D G3DSA:3.40.50.920 199 321 1.8E-45 T 05-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AC028_RS07935 aa960af9cf315473d3a1d467c368bbf2 327 SUPERFAMILY SSF52922 191 323 1.13E-39 T 05-07-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AC028_RS07935 aa960af9cf315473d3a1d467c368bbf2 327 Gene3D G3DSA:3.40.50.970 4 195 4.8E-72 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS07935 aa960af9cf315473d3a1d467c368bbf2 327 Pfam PF02780 Transketolase, C-terminal domain 199 316 6.2E-38 T 05-07-2017 IPR033248 Transketolase, C-terminal domain AC028_RS07935 aa960af9cf315473d3a1d467c368bbf2 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 179 5.4E-43 T 05-07-2017 IPR005475 Transketolase-like, pyrimidine-binding domain AC028_RS07935 aa960af9cf315473d3a1d467c368bbf2 327 SUPERFAMILY SSF52518 4 193 3.91E-62 T 05-07-2017 IPR029061 Thiamin diphosphate-binding fold AC028_RS10565 21f4e91453cb7c2d13e6e535766e8437 576 SUPERFAMILY SSF53822 250 572 7.07E-62 T 05-07-2017 IPR028082 Periplasmic binding protein-like I AC028_RS10565 21f4e91453cb7c2d13e6e535766e8437 576 Pfam PF04348 LppC putative lipoprotein 43 567 1.4E-118 T 05-07-2017 IPR007443 Penicillin-binding protein activator LpoA AC028_RS10565 21f4e91453cb7c2d13e6e535766e8437 576 Gene3D G3DSA:3.40.50.2300 249 357 4.4E-36 T 05-07-2017 AC028_RS10565 21f4e91453cb7c2d13e6e535766e8437 576 Gene3D G3DSA:3.40.50.2300 488 557 4.4E-36 T 05-07-2017 AC028_RS10565 21f4e91453cb7c2d13e6e535766e8437 576 Gene3D G3DSA:3.40.50.2300 358 487 6.9E-24 T 05-07-2017 AC028_RS02015 b8a958099933f92dfec84be864374ba8 620 Gene3D G3DSA:3.30.70.1450 244 318 1.6E-10 T 05-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AC028_RS02015 b8a958099933f92dfec84be864374ba8 620 Gene3D G3DSA:3.30.70.1450 336 413 3.7E-18 T 05-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AC028_RS02015 b8a958099933f92dfec84be864374ba8 620 Pfam PF03600 Citrate transporter 23 563 1.0E-40 T 05-07-2017 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 AC028_RS02015 b8a958099933f92dfec84be864374ba8 620 Pfam PF02080 TrkA-C domain 246 313 7.3E-9 T 05-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AC028_RS02015 b8a958099933f92dfec84be864374ba8 620 Pfam PF02080 TrkA-C domain 338 403 1.0E-8 T 05-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AC028_RS02015 b8a958099933f92dfec84be864374ba8 620 SUPERFAMILY SSF116726 240 313 2.62E-9 T 05-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AC028_RS02015 b8a958099933f92dfec84be864374ba8 620 SUPERFAMILY SSF116726 337 413 1.12E-14 T 05-07-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AC028_RS18295 0e2f936535c7d6600cf49cefe75acf12 138 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 67 121 2.3E-15 T 05-07-2017 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 AC028_RS12375 e4cf2db3e9c6bd92b50ff7fbadd3952f 332 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 41 321 2.0E-37 T 05-07-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AC028_RS12375 e4cf2db3e9c6bd92b50ff7fbadd3952f 332 Gene3D G3DSA:3.90.245.10 39 328 2.8E-56 T 05-07-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AC028_RS12375 e4cf2db3e9c6bd92b50ff7fbadd3952f 332 SUPERFAMILY SSF53590 41 328 2.35E-54 T 05-07-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AC028_RS01450 52085088fed4e845cb221e10fca23c8b 242 Gene3D G3DSA:3.30.70.980 132 203 2.8E-23 T 05-07-2017 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS01450 52085088fed4e845cb221e10fca23c8b 242 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 6 235 2.1E-86 T 05-07-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS01450 52085088fed4e845cb221e10fca23c8b 242 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 2 237 33.158 T 05-07-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS01450 52085088fed4e845cb221e10fca23c8b 242 Pfam PF01709 Transcriptional regulator 7 235 2.8E-86 T 05-07-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS01450 52085088fed4e845cb221e10fca23c8b 242 Gene3D G3DSA:3.30.1270.10 79 131 4.4E-39 T 05-07-2017 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS01450 52085088fed4e845cb221e10fca23c8b 242 Gene3D G3DSA:3.30.1270.10 210 236 4.4E-39 T 05-07-2017 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS01450 52085088fed4e845cb221e10fca23c8b 242 SUPERFAMILY SSF75625 7 236 5.76E-85 T 05-07-2017 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS01450 52085088fed4e845cb221e10fca23c8b 242 Gene3D G3DSA:1.10.10.200 7 75 8.1E-25 T 05-07-2017 IPR017856 Integrase, N-terminal zinc-binding domain-like AC028_RS22010 45fe44e8f398fff77ff3e9d75b8d1d46 225 SUPERFAMILY SSF74653 137 222 8.11E-23 T 05-07-2017 AC028_RS22010 45fe44e8f398fff77ff3e9d75b8d1d46 225 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 145 224 2.6E-24 T 05-07-2017 IPR006260 TonB, C-terminal GO:0006810 AC028_RS22010 45fe44e8f398fff77ff3e9d75b8d1d46 225 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 147 225 1.1E-18 T 05-07-2017 IPR006260 TonB, C-terminal GO:0006810 AC028_RS22010 45fe44e8f398fff77ff3e9d75b8d1d46 225 Gene3D G3DSA:3.30.1150.10 137 225 1.5E-13 T 05-07-2017 AC028_RS17115 c0daf38f6eeda1a088b156f54b80bc8f 303 Pfam PF13480 Acetyltransferase (GNAT) domain 151 272 6.3E-12 T 05-07-2017 AC028_RS17115 c0daf38f6eeda1a088b156f54b80bc8f 303 Gene3D G3DSA:3.40.630.30 146 292 9.2E-22 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS17115 c0daf38f6eeda1a088b156f54b80bc8f 303 SUPERFAMILY SSF55729 145 295 3.89E-26 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS17170 3fb8cd358d9efb01af0d249c520b430c 404 Pfam PF14907 Uncharacterised nucleotidyltransferase 36 261 1.1E-27 T 05-07-2017 AC028_RS19720 89e16d09466165317b56705270f08e97 612 Gene3D G3DSA:3.40.50.720 262 444 2.7E-42 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS19720 89e16d09466165317b56705270f08e97 612 Pfam PF02719 Polysaccharide biosynthesis protein 264 546 1.2E-111 T 05-07-2017 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AC028_RS19720 89e16d09466165317b56705270f08e97 612 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 262 431 0.002 T 05-07-2017 AC028_RS19720 89e16d09466165317b56705270f08e97 612 Gene3D G3DSA:3.90.25.10 445 524 3.4E-7 T 05-07-2017 AC028_RS19720 89e16d09466165317b56705270f08e97 612 Pfam PF13727 CoA-binding domain 45 219 5.5E-14 T 05-07-2017 AC028_RS19720 89e16d09466165317b56705270f08e97 612 SUPERFAMILY SSF53335 89 309 4.32E-12 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS19720 89e16d09466165317b56705270f08e97 612 Gene3D G3DSA:3.40.50.720 121 215 2.4E-10 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS19720 89e16d09466165317b56705270f08e97 612 SUPERFAMILY SSF51735 262 530 1.03E-57 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS17300 ef749fa738d7aab431a6ce42e0137746 225 Gene3D G3DSA:3.40.50.150 29 222 2.1E-59 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS17300 ef749fa738d7aab431a6ce42e0137746 225 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 145 160 - T 05-07-2017 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AC028_RS17300 ef749fa738d7aab431a6ce42e0137746 225 SUPERFAMILY SSF53335 19 222 4.58E-43 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS17300 ef749fa738d7aab431a6ce42e0137746 225 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 23 221 2.0E-55 T 05-07-2017 AC028_RS17300 ef749fa738d7aab431a6ce42e0137746 225 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 18 222 6.8E-60 T 05-07-2017 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AC028_RS17300 ef749fa738d7aab431a6ce42e0137746 225 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 17 225 34.932 T 05-07-2017 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AC028_RS07925 07df3b12111941ade8370863983d4bbe 505 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 05-07-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AC028_RS07925 07df3b12111941ade8370863983d4bbe 505 Gene3D G3DSA:4.10.320.10 169 216 3.6E-13 T 05-07-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AC028_RS07925 07df3b12111941ade8370863983d4bbe 505 SUPERFAMILY SSF51230 5 92 1.44E-23 T 05-07-2017 IPR011053 Single hybrid motif AC028_RS07925 07df3b12111941ade8370863983d4bbe 505 Gene3D G3DSA:2.40.50.100 6 79 2.4E-21 T 05-07-2017 AC028_RS07925 07df3b12111941ade8370863983d4bbe 505 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 298 497 1.8E-45 T 05-07-2017 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AC028_RS07925 07df3b12111941ade8370863983d4bbe 505 Pfam PF02817 e3 binding domain 170 204 4.1E-9 T 05-07-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AC028_RS07925 07df3b12111941ade8370863983d4bbe 505 Gene3D G3DSA:3.30.559.10 286 497 1.5E-48 T 05-07-2017 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 AC028_RS07925 07df3b12111941ade8370863983d4bbe 505 Pfam PF00364 Biotin-requiring enzyme 6 77 2.0E-17 T 05-07-2017 IPR000089 Biotin/lipoyl attachment AC028_RS07925 07df3b12111941ade8370863983d4bbe 505 SUPERFAMILY SSF47005 170 209 1.03E-8 T 05-07-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AC028_RS07925 07df3b12111941ade8370863983d4bbe 505 SUPERFAMILY SSF52777 287 501 7.12E-53 T 05-07-2017 AC028_RS12615 a994a79c6b5074da685e40e8be73652c 209 Gene3D G3DSA:2.60.120.590 77 190 1.5E-21 T 05-07-2017 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AC028_RS12615 a994a79c6b5074da685e40e8be73652c 209 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 78 188 3.7E-15 T 05-07-2017 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AC028_RS12615 a994a79c6b5074da685e40e8be73652c 209 SUPERFAMILY SSF51197 9 189 2.2E-41 T 05-07-2017 AC028_RS06785 62aaeb75106b50488936cbc8e7a33573 464 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 113 407 2.1E-11 T 05-07-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AC028_RS06785 62aaeb75106b50488936cbc8e7a33573 464 Gene3D G3DSA:3.90.245.10 113 346 4.4E-18 T 05-07-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AC028_RS06785 62aaeb75106b50488936cbc8e7a33573 464 SUPERFAMILY SSF53590 110 359 1.96E-30 T 05-07-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AC028_RS15155 cae3bda4a03e3e1e1c5eef4d54757a4a 132 Pfam PF04138 GtrA-like protein 8 127 4.9E-19 T 05-07-2017 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 AC028_RS16800 d25014388a4a5af8579c13f1a34b5cd2 321 Gene3D G3DSA:3.40.50.1820 50 308 1.3E-48 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS16800 d25014388a4a5af8579c13f1a34b5cd2 321 Pfam PF00756 Putative esterase 142 306 4.6E-6 T 05-07-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 AC028_RS16800 d25014388a4a5af8579c13f1a34b5cd2 321 SUPERFAMILY SSF53474 49 308 4.36E-37 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS22020 13372802d5e5cd5243c43080b6f91c9f 511 Pfam PF05787 Bacterial protein of unknown function (DUF839) 51 497 1.9E-87 T 05-07-2017 IPR008557 Protein of unknown function DUF839 AC028_RS22020 13372802d5e5cd5243c43080b6f91c9f 511 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 8 29 1.3E-5 T 05-07-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AC028_RS03835 0ceacd09b081c5f2058b01b7e304b342 385 Pfam PF05227 CHASE3 domain 40 174 1.4E-31 T 05-07-2017 IPR007891 CHASE3 AC028_RS11065 e87ab647796fab8c157eb63d8f3044a1 549 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS11065 e87ab647796fab8c157eb63d8f3044a1 549 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 513 544 9.3E-4 T 05-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AC028_RS11065 e87ab647796fab8c157eb63d8f3044a1 549 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 276 4.1E-6 T 05-07-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AC028_RS11065 e87ab647796fab8c157eb63d8f3044a1 549 Gene3D G3DSA:3.40.50.300 277 539 3.4E-73 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11065 e87ab647796fab8c157eb63d8f3044a1 549 SUPERFAMILY SSF52540 5 255 3.13E-50 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11065 e87ab647796fab8c157eb63d8f3044a1 549 SMART SM00382 35 233 4.8E-14 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS11065 e87ab647796fab8c157eb63d8f3044a1 549 SMART SM00382 314 510 5.6E-13 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS11065 e87ab647796fab8c157eb63d8f3044a1 549 SUPERFAMILY SSF52540 284 532 2.21E-62 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11065 e87ab647796fab8c157eb63d8f3044a1 549 Pfam PF00005 ABC transporter 306 460 3.0E-27 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS11065 e87ab647796fab8c157eb63d8f3044a1 549 Pfam PF00005 ABC transporter 27 184 1.5E-18 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS11065 e87ab647796fab8c157eb63d8f3044a1 549 Gene3D G3DSA:3.40.50.300 4 257 6.6E-60 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS19560 878820e456ffc28bff04772139236327 52 TIGRFAM TIGR03510 XapX: XapX domain 5 50 2.6E-14 T 05-07-2017 IPR020017 XapX domain AC028_RS20535 0ac7aeee043601a78f15512b10b7555b 247 PRINTS PR00603 Cytochrome C1 signature 193 212 1.6E-11 T 05-07-2017 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AC028_RS20535 0ac7aeee043601a78f15512b10b7555b 247 PRINTS PR00603 Cytochrome C1 signature 46 65 1.6E-11 T 05-07-2017 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AC028_RS20535 0ac7aeee043601a78f15512b10b7555b 247 PRINTS PR00603 Cytochrome C1 signature 108 132 1.6E-11 T 05-07-2017 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AC028_RS20535 0ac7aeee043601a78f15512b10b7555b 247 PRINTS PR00603 Cytochrome C1 signature 212 227 1.6E-11 T 05-07-2017 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AC028_RS20535 0ac7aeee043601a78f15512b10b7555b 247 Pfam PF02167 Cytochrome C1 family 38 246 5.2E-23 T 05-07-2017 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AC028_RS20535 0ac7aeee043601a78f15512b10b7555b 247 Gene3D G3DSA:1.20.5.100 216 247 4.4E-12 T 05-07-2017 AC028_RS20535 0ac7aeee043601a78f15512b10b7555b 247 Gene3D G3DSA:1.10.760.10 23 212 3.6E-65 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS20535 0ac7aeee043601a78f15512b10b7555b 247 SUPERFAMILY SSF46626 32 211 7.9E-49 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS22435 eb8405cebca1b060d9b92aea93d4bcec 221 Pfam PF07996 Type IV secretion system proteins 26 209 1.8E-31 T 05-07-2017 IPR014158 Type IV secretion system, VirB5 AC028_RS22435 eb8405cebca1b060d9b92aea93d4bcec 221 SUPERFAMILY SSF101082 26 207 6.28E-41 T 05-07-2017 IPR023220 Type IV secretion system, VirB5-domain AC028_RS22435 eb8405cebca1b060d9b92aea93d4bcec 221 Gene3D G3DSA:1.20.58.430 26 208 2.1E-41 T 05-07-2017 IPR023220 Type IV secretion system, VirB5-domain AC028_RS01150 9d2bdd1a2a1a3d9abc368b6bc2e17c0a 207 SUPERFAMILY SSF55729 12 181 6.89E-37 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS01150 9d2bdd1a2a1a3d9abc368b6bc2e17c0a 207 Pfam PF13302 Acetyltransferase (GNAT) domain 54 157 3.4E-14 T 05-07-2017 IPR000182 GNAT domain GO:0008080 AC028_RS01150 9d2bdd1a2a1a3d9abc368b6bc2e17c0a 207 Gene3D G3DSA:3.40.630.30 10 182 2.8E-40 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS21665 c9026787201f27b4099eaefdf90d6783 788 Pfam PF00672 HAMP domain 275 341 9.1E-14 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS21665 c9026787201f27b4099eaefdf90d6783 788 SUPERFAMILY SSF55073 357 500 2.12E-36 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS21665 c9026787201f27b4099eaefdf90d6783 788 Pfam PF00563 EAL domain 529 762 5.4E-68 T 05-07-2017 IPR001633 EAL domain AC028_RS21665 c9026787201f27b4099eaefdf90d6783 788 SMART SM00304 294 346 5.8E-11 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS21665 c9026787201f27b4099eaefdf90d6783 788 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 350 500 6.5E-31 T 05-07-2017 IPR000160 GGDEF domain AC028_RS21665 c9026787201f27b4099eaefdf90d6783 788 SMART SM00052 522 767 1.4E-100 T 05-07-2017 IPR001633 EAL domain AC028_RS21665 c9026787201f27b4099eaefdf90d6783 788 SUPERFAMILY SSF141868 528 775 1.27E-84 T 05-07-2017 IPR001633 EAL domain AC028_RS21665 c9026787201f27b4099eaefdf90d6783 788 Pfam PF14827 Double sensory domain of two-component sensor kinase 43 226 2.2E-11 T 05-07-2017 IPR029150 Double Cache domain 3 AC028_RS21665 c9026787201f27b4099eaefdf90d6783 788 Gene3D G3DSA:3.30.70.270 353 500 4.7E-42 T 05-07-2017 AC028_RS21665 c9026787201f27b4099eaefdf90d6783 788 Gene3D G3DSA:3.20.20.450 525 774 1.1E-90 T 05-07-2017 IPR001633 EAL domain AC028_RS21665 c9026787201f27b4099eaefdf90d6783 788 SUPERFAMILY SSF158472 294 342 1.26E-7 T 05-07-2017 AC028_RS21665 c9026787201f27b4099eaefdf90d6783 788 Pfam PF00990 Diguanylate cyclase, GGDEF domain 352 501 8.6E-37 T 05-07-2017 IPR000160 GGDEF domain AC028_RS21665 c9026787201f27b4099eaefdf90d6783 788 SMART SM00267 341 512 7.5E-42 T 05-07-2017 IPR000160 GGDEF domain AC028_RS14650 9c232b75264054dfbefe0c6957c3d015 445 Pfam PF07995 Glucose / Sorbosone dehydrogenase 180 369 3.0E-12 T 05-07-2017 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 AC028_RS14650 9c232b75264054dfbefe0c6957c3d015 445 SUPERFAMILY SSF50952 133 443 6.8E-34 T 05-07-2017 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AC028_RS14650 9c232b75264054dfbefe0c6957c3d015 445 SUPERFAMILY SSF50952 69 100 6.8E-34 T 05-07-2017 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AC028_RS14650 9c232b75264054dfbefe0c6957c3d015 445 Gene3D G3DSA:2.120.10.30 134 444 4.5E-61 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS14650 9c232b75264054dfbefe0c6957c3d015 445 Gene3D G3DSA:2.120.10.30 19 25 4.5E-61 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS14650 9c232b75264054dfbefe0c6957c3d015 445 Gene3D G3DSA:2.120.10.30 67 100 4.5E-61 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS07405 40765ea4138144c0617c36d20902f900 182 Pfam PF13533 Biotin-lipoyl like 71 108 1.9E-6 T 05-07-2017 AC028_RS07405 40765ea4138144c0617c36d20902f900 182 SUPERFAMILY SSF51230 75 141 5.14E-5 T 05-07-2017 IPR011053 Single hybrid motif AC028_RS07405 40765ea4138144c0617c36d20902f900 182 Gene3D G3DSA:2.40.50.100 75 141 3.1E-5 T 05-07-2017 AC028_RS07970 212ce0e1f55325163fd3cfebb65681ea 356 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 164 274 8.2E-16 T 05-07-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AC028_RS07970 212ce0e1f55325163fd3cfebb65681ea 356 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 14 356 1.0E-113 T 05-07-2017 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AC028_RS07970 212ce0e1f55325163fd3cfebb65681ea 356 Gene3D G3DSA:3.10.180.10 5 151 8.3E-36 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS07970 212ce0e1f55325163fd3cfebb65681ea 356 Gene3D G3DSA:3.10.180.10 160 356 4.7E-68 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS07970 212ce0e1f55325163fd3cfebb65681ea 356 SUPERFAMILY SSF54593 1 343 2.82E-72 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS07970 212ce0e1f55325163fd3cfebb65681ea 356 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 147 2.5E-60 T 05-07-2017 AC028_RS07970 212ce0e1f55325163fd3cfebb65681ea 356 PIRSF PIRSF009283 1 356 2.6E-126 T 05-07-2017 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AC028_RS19625 809d6f85c88d9ad0fe6bae6215d6c545 814 Hamap MF_01871 UPF0753 protein . 18 790 21.99 T 05-07-2017 IPR018752 Uncharacterised protein family UPF0753 AC028_RS19625 809d6f85c88d9ad0fe6bae6215d6c545 814 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 24 775 2.4E-246 T 05-07-2017 IPR018752 Uncharacterised protein family UPF0753 AC028_RS11460 3cb273b7068a9326fd4bb693efd369c2 198 Gene3D G3DSA:3.40.50.360 1 196 1.2E-65 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS11460 3cb273b7068a9326fd4bb693efd369c2 198 SUPERFAMILY SSF52218 1 195 1.15E-56 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS11460 3cb273b7068a9326fd4bb693efd369c2 198 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 197 31.34 T 05-07-2017 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AC028_RS11460 3cb273b7068a9326fd4bb693efd369c2 198 Pfam PF03358 NADPH-dependent FMN reductase 64 129 4.4E-9 T 05-07-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AC028_RS11460 3cb273b7068a9326fd4bb693efd369c2 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 195 2.2E-48 T 05-07-2017 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AC028_RS19395 7bcd8aaaec2da312bf0f1f98d51d63b4 217 Pfam PF12588 Phophatidylserine decarboxylase 56 168 2.8E-26 T 05-07-2017 IPR022237 Phophatidylserine decarboxylase AC028_RS21175 5a2206d48fb35307923f2c007c4389eb 218 SMART SM00507 111 164 1.2E-9 T 05-07-2017 IPR003615 HNH nuclease AC028_RS21175 5a2206d48fb35307923f2c007c4389eb 218 Pfam PF14279 HNH endonuclease 124 178 3.2E-17 T 05-07-2017 IPR029471 HNH endonuclease 5 AC028_RS11050 23291802ed479d2151f2ecabf2b12248 544 Gene3D G3DSA:3.40.190.10 195 301 6.0E-28 T 05-07-2017 AC028_RS11050 23291802ed479d2151f2ecabf2b12248 544 Gene3D G3DSA:3.90.76.10 45 194 2.6E-38 T 05-07-2017 AC028_RS11050 23291802ed479d2151f2ecabf2b12248 544 Gene3D G3DSA:3.10.105.10 302 502 1.8E-39 T 05-07-2017 AC028_RS11050 23291802ed479d2151f2ecabf2b12248 544 SUPERFAMILY SSF53850 32 542 1.36E-113 T 05-07-2017 AC028_RS11050 23291802ed479d2151f2ecabf2b12248 544 PIRSF PIRSF002741 1 544 7.1E-89 T 05-07-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AC028_RS11050 23291802ed479d2151f2ecabf2b12248 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 442 2.0E-77 T 05-07-2017 IPR000914 Solute-binding protein family 5 domain AC028_RS02985 c7837c739598f8ce701ed450fc205346 223 Pfam PF08242 Methyltransferase domain 53 149 1.3E-14 T 05-07-2017 IPR013217 Methyltransferase type 12 AC028_RS02985 c7837c739598f8ce701ed450fc205346 223 Gene3D G3DSA:3.40.50.150 22 201 4.0E-17 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS02985 c7837c739598f8ce701ed450fc205346 223 SUPERFAMILY SSF53335 22 202 3.08E-20 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS18715 e9c6db10bb060ea7b56ee92eea44a331 152 Pfam PF00293 NUDIX domain 12 120 5.7E-15 T 05-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AC028_RS18715 e9c6db10bb060ea7b56ee92eea44a331 152 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 05-07-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AC028_RS18715 e9c6db10bb060ea7b56ee92eea44a331 152 SUPERFAMILY SSF55811 7 144 5.82E-30 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS18715 e9c6db10bb060ea7b56ee92eea44a331 152 Gene3D G3DSA:3.90.79.10 7 147 3.3E-32 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS12585 96f80df3fc5061bf7940c0cc9205123c 601 Gene3D G3DSA:1.50.10.10 233 600 6.9E-50 T 05-07-2017 IPR012341 Six-hairpin glycosidase GO:0003824 AC028_RS12585 96f80df3fc5061bf7940c0cc9205123c 601 SUPERFAMILY SSF48208 224 594 9.36E-75 T 05-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AC028_RS12585 96f80df3fc5061bf7940c0cc9205123c 601 Pfam PF00723 Glycosyl hydrolases family 15 237 545 7.3E-26 T 05-07-2017 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: R-HSA-70221 AC028_RS03085 e647560ebc1a3a202b617fbcb8b01f0c 714 Pfam PF07238 PilZ domain 560 656 2.8E-11 T 05-07-2017 IPR009875 PilZ domain GO:0035438 AC028_RS03085 e647560ebc1a3a202b617fbcb8b01f0c 714 Pfam PF03552 Cellulose synthase 316 441 2.0E-10 T 05-07-2017 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 AC028_RS03085 e647560ebc1a3a202b617fbcb8b01f0c 714 SUPERFAMILY SSF53448 140 415 4.76E-50 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS03085 e647560ebc1a3a202b617fbcb8b01f0c 714 Gene3D G3DSA:3.90.550.10 138 366 1.3E-22 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS03085 e647560ebc1a3a202b617fbcb8b01f0c 714 PRINTS PR01439 Cellulose synthase subunit A signature 92 117 1.5E-61 T 05-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AC028_RS03085 e647560ebc1a3a202b617fbcb8b01f0c 714 PRINTS PR01439 Cellulose synthase subunit A signature 498 522 1.5E-61 T 05-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AC028_RS03085 e647560ebc1a3a202b617fbcb8b01f0c 714 PRINTS PR01439 Cellulose synthase subunit A signature 64 84 1.5E-61 T 05-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AC028_RS03085 e647560ebc1a3a202b617fbcb8b01f0c 714 PRINTS PR01439 Cellulose synthase subunit A signature 418 437 1.5E-61 T 05-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AC028_RS03085 e647560ebc1a3a202b617fbcb8b01f0c 714 PRINTS PR01439 Cellulose synthase subunit A signature 458 477 1.5E-61 T 05-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AC028_RS03085 e647560ebc1a3a202b617fbcb8b01f0c 714 PRINTS PR01439 Cellulose synthase subunit A signature 389 415 1.5E-61 T 05-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AC028_RS03085 e647560ebc1a3a202b617fbcb8b01f0c 714 PRINTS PR01439 Cellulose synthase subunit A signature 147 166 1.5E-61 T 05-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AC028_RS03085 e647560ebc1a3a202b617fbcb8b01f0c 714 PRINTS PR01439 Cellulose synthase subunit A signature 228 252 1.5E-61 T 05-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AC028_RS03085 e647560ebc1a3a202b617fbcb8b01f0c 714 PRINTS PR01439 Cellulose synthase subunit A signature 533 554 1.5E-61 T 05-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AC028_RS03085 e647560ebc1a3a202b617fbcb8b01f0c 714 Pfam PF00535 Glycosyl transferase family 2 141 312 2.9E-36 T 05-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AC028_RS03085 e647560ebc1a3a202b617fbcb8b01f0c 714 SUPERFAMILY SSF141371 562 648 2.12E-7 T 05-07-2017 AC028_RS03085 e647560ebc1a3a202b617fbcb8b01f0c 714 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 15 697 2.1E-271 T 05-07-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 AC028_RS14065 1a3310addf7ade401aac85a89b464676 173 Pfam PF13420 Acetyltransferase (GNAT) domain 54 156 3.1E-18 T 05-07-2017 AC028_RS14065 1a3310addf7ade401aac85a89b464676 173 Gene3D G3DSA:3.40.630.30 9 165 2.2E-37 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS14065 1a3310addf7ade401aac85a89b464676 173 SUPERFAMILY SSF55729 9 164 1.08E-32 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS22060 c16e3990bd4353fedee8ea5590793313 149 Pfam PF14539 Domain of unknown function (DUF4442) 5 143 3.4E-23 T 05-07-2017 IPR027961 Protein of unknown function DUF4442 AC028_RS22060 c16e3990bd4353fedee8ea5590793313 149 Gene3D G3DSA:3.10.129.10 1 147 1.8E-44 T 05-07-2017 IPR029069 HotDog domain AC028_RS22060 c16e3990bd4353fedee8ea5590793313 149 SUPERFAMILY SSF54637 5 144 1.81E-24 T 05-07-2017 IPR029069 HotDog domain AC028_RS14350 71a5b350741840a2359c5064773d46d2 394 Pfam PF13450 NAD(P)-binding Rossmann-like domain 26 90 1.4E-16 T 05-07-2017 AC028_RS14350 71a5b350741840a2359c5064773d46d2 394 SUPERFAMILY SSF54373 267 332 2.55E-21 T 05-07-2017 AC028_RS14350 71a5b350741840a2359c5064773d46d2 394 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 22 380 6.4E-121 T 05-07-2017 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 AC028_RS14350 71a5b350741840a2359c5064773d46d2 394 Gene3D G3DSA:3.40.50.720 340 382 1.4E-45 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS14350 71a5b350741840a2359c5064773d46d2 394 Gene3D G3DSA:3.40.50.720 203 276 1.4E-45 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS14350 71a5b350741840a2359c5064773d46d2 394 Gene3D G3DSA:3.40.50.720 21 100 1.4E-45 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS14350 71a5b350741840a2359c5064773d46d2 394 SUPERFAMILY SSF51971 350 385 9.65E-52 T 05-07-2017 AC028_RS14350 71a5b350741840a2359c5064773d46d2 394 SUPERFAMILY SSF51971 22 285 9.65E-52 T 05-07-2017 AC028_RS14350 71a5b350741840a2359c5064773d46d2 394 Pfam PF03275 UDP-galactopyranose mutase 169 365 1.5E-83 T 05-07-2017 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 AC028_RS06745 906b5d6d94640398422b691d081b11d7 190 SUPERFAMILY SSF48498 83 181 3.56E-7 T 05-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AC028_RS06745 906b5d6d94640398422b691d081b11d7 190 SUPERFAMILY SSF46689 6 77 3.59E-17 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS06745 906b5d6d94640398422b691d081b11d7 190 Gene3D G3DSA:1.10.357.10 6 182 2.6E-32 T 05-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AC028_RS06745 906b5d6d94640398422b691d081b11d7 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 1.6E-14 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS06745 906b5d6d94640398422b691d081b11d7 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 3.7E-8 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS06745 906b5d6d94640398422b691d081b11d7 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 3.7E-8 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS11475 4a437a29d1080483ea5b8899a9e31dfe 88 Gene3D G3DSA:3.30.70.100 1 85 2.6E-23 T 05-07-2017 AC028_RS11475 4a437a29d1080483ea5b8899a9e31dfe 88 SUPERFAMILY SSF54975 1 86 2.03E-23 T 05-07-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AC028_RS11475 4a437a29d1080483ea5b8899a9e31dfe 88 Pfam PF00708 Acylphosphatase 1 85 2.9E-20 T 05-07-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AC028_RS15885 181a2ba2c1c9a4996a7620a38827bb07 94 Pfam PF01609 Transposase DDE domain 17 78 1.9E-9 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS08685 0293a4597505caa002d90c66a8540232 287 SMART SM01126 104 252 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS08685 0293a4597505caa002d90c66a8540232 287 Pfam PF12762 ISXO2-like transposase domain 104 252 3.4E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS05655 2b79685c821b8adb5127a76c7fc77ab5 205 SMART SM00342 118 200 2.7E-8 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS05655 2b79685c821b8adb5127a76c7fc77ab5 205 Pfam PF12833 Helix-turn-helix domain 125 201 7.5E-14 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS05655 2b79685c821b8adb5127a76c7fc77ab5 205 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 152 196 - T 05-07-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AC028_RS01550 0eab280c1db02950fec305f1acefbae4 795 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 171 1.2E-22 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS01550 0eab280c1db02950fec305f1acefbae4 795 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 43 - T 05-07-2017 IPR010916 TonB box, conserved site AC028_RS01550 0eab280c1db02950fec305f1acefbae4 795 Gene3D G3DSA:2.40.170.20 173 795 1.7E-89 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01550 0eab280c1db02950fec305f1acefbae4 795 Gene3D G3DSA:2.170.130.10 50 172 1.6E-32 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS01550 0eab280c1db02950fec305f1acefbae4 795 SUPERFAMILY SSF56935 36 795 7.69E-106 T 05-07-2017 AC028_RS01550 0eab280c1db02950fec305f1acefbae4 795 Pfam PF00593 TonB dependent receptor 478 793 4.3E-28 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS11255 1fd5eec2055ed67f1156b66110727281 76 Pfam PF09413 Putative prokaryotic signal transducing protein 1 66 1.2E-11 T 05-07-2017 IPR018551 Domain of unknown function DUF2007 AC028_RS11255 1fd5eec2055ed67f1156b66110727281 76 Gene3D G3DSA:3.30.70.790 10 70 2.3E-4 T 05-07-2017 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 AC028_RS11255 1fd5eec2055ed67f1156b66110727281 76 SUPERFAMILY SSF54913 6 69 8.45E-5 T 05-07-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta AC028_RS02000 9e82e8614ced4ba9f6561944e4513b53 66 Pfam PF02597 ThiS family 3 66 4.4E-15 T 05-07-2017 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 AC028_RS02000 9e82e8614ced4ba9f6561944e4513b53 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 2.8E-23 T 05-07-2017 IPR010035 ThiS, thiamine-biosynthesis AC028_RS02000 9e82e8614ced4ba9f6561944e4513b53 66 SUPERFAMILY SSF54285 2 65 2.91E-18 T 05-07-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AC028_RS02000 9e82e8614ced4ba9f6561944e4513b53 66 Gene3D G3DSA:3.10.20.30 1 66 4.5E-28 T 05-07-2017 IPR012675 Beta-grasp domain AC028_RS17515 1ee6e45fb948877b0a77e033045943cf 323 SUPERFAMILY SSF53850 107 313 1.15E-34 T 05-07-2017 AC028_RS17515 1ee6e45fb948877b0a77e033045943cf 323 Gene3D G3DSA:1.10.10.10 15 99 7.2E-21 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS17515 1ee6e45fb948877b0a77e033045943cf 323 SUPERFAMILY SSF46785 11 124 6.09E-22 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS17515 1ee6e45fb948877b0a77e033045943cf 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 52 1.3E-5 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS17515 1ee6e45fb948877b0a77e033045943cf 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 63 1.3E-5 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS17515 1ee6e45fb948877b0a77e033045943cf 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 42 1.3E-5 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS17515 1ee6e45fb948877b0a77e033045943cf 323 Gene3D G3DSA:3.40.190.10 102 196 3.5E-20 T 05-07-2017 AC028_RS17515 1ee6e45fb948877b0a77e033045943cf 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 74 7.8E-17 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS17515 1ee6e45fb948877b0a77e033045943cf 323 Gene3D G3DSA:3.40.190.10 197 276 9.9E-13 T 05-07-2017 AC028_RS17515 1ee6e45fb948877b0a77e033045943cf 323 Pfam PF03466 LysR substrate binding domain 101 309 1.4E-32 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS08065 7e7eb27ea5a3414d6357716ea880fc7f 163 SUPERFAMILY SSF55729 7 154 8.75E-40 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS08065 7e7eb27ea5a3414d6357716ea880fc7f 163 Gene3D G3DSA:3.40.630.30 5 160 3.4E-62 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS08065 7e7eb27ea5a3414d6357716ea880fc7f 163 Pfam PF00583 Acetyltransferase (GNAT) family 60 140 3.0E-17 T 05-07-2017 IPR000182 GNAT domain GO:0008080 AC028_RS18860 b24261285cb9176fa19da4b3649762b0 192 Pfam PF13628 Domain of unknown function (DUF4142) 46 182 2.3E-27 T 05-07-2017 IPR025419 Domain of unknown function DUF4142 AC028_RS18860 b24261285cb9176fa19da4b3649762b0 192 Gene3D G3DSA:1.20.1260.10 61 160 5.7E-6 T 05-07-2017 IPR012347 Ferritin-related AC028_RS13625 adecc47c394de953e8833eeb87040827 238 Pfam PF02104 SURF1 family 16 220 6.3E-21 T 05-07-2017 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS11330 253286dfd3f8b8d8a52d36044500a986 268 SUPERFAMILY SSF53187 17 265 1.57E-79 T 05-07-2017 AC028_RS11330 253286dfd3f8b8d8a52d36044500a986 268 Pfam PF05013 N-formylglutamate amidohydrolase 34 241 1.6E-47 T 05-07-2017 IPR007709 N-formylglutamate amidohydrolase AC028_RS11330 253286dfd3f8b8d8a52d36044500a986 268 PIRSF PIRSF029730 12 267 2.2E-103 T 05-07-2017 IPR011227 Uncharacterised conserved protein UCP029730 AC028_RS11330 253286dfd3f8b8d8a52d36044500a986 268 Gene3D G3DSA:3.40.630.40 24 265 1.3E-87 T 05-07-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AC028_RS04405 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 SMART SM00862 145 220 6.1E-26 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS04405 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 3.4E-24 T 05-07-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AC028_RS04405 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 SUPERFAMILY SSF52172 1 170 1.03E-39 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS04405 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 Gene3D G3DSA:1.10.10.10 124 221 3.7E-31 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS04405 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 Gene3D G3DSA:3.40.50.2300 1 123 4.0E-38 T 05-07-2017 AC028_RS04405 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 Pfam PF00072 Response regulator receiver domain 3 113 3.3E-27 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS04405 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 SMART SM00448 1 112 5.0E-41 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS11365 9a2b8602a7860d8678e65211da391449 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 64 3.0E-6 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS11365 9a2b8602a7860d8678e65211da391449 199 Gene3D G3DSA:1.10.10.60 4 65 3.5E-13 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS11365 9a2b8602a7860d8678e65211da391449 199 SUPERFAMILY SSF48498 86 196 2.52E-18 T 05-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AC028_RS11365 9a2b8602a7860d8678e65211da391449 199 Gene3D G3DSA:1.10.357.10 66 178 1.4E-14 T 05-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AC028_RS11365 9a2b8602a7860d8678e65211da391449 199 Pfam PF13305 WHG domain 92 176 7.6E-14 T 05-07-2017 IPR025996 WHG domain AC028_RS11365 9a2b8602a7860d8678e65211da391449 199 SUPERFAMILY SSF46689 10 79 5.03E-13 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS07595 c215a840b1884250bdf4aa4d8c0380b6 336 SUPERFAMILY SSF51695 22 165 8.11E-27 T 05-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AC028_RS07595 c215a840b1884250bdf4aa4d8c0380b6 336 Gene3D G3DSA:3.20.20.190 22 165 1.4E-27 T 05-07-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AC028_RS07595 c215a840b1884250bdf4aa4d8c0380b6 336 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 28 89 1.1E-14 T 05-07-2017 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AC028_RS21465 a7a03cda4bfe99f13c11b0263811d11a 1074 SUPERFAMILY SSF56935 801 918 2.01E-46 T 05-07-2017 AC028_RS21465 a7a03cda4bfe99f13c11b0263811d11a 1074 SUPERFAMILY SSF56935 365 737 2.01E-46 T 05-07-2017 AC028_RS21465 a7a03cda4bfe99f13c11b0263811d11a 1074 SUPERFAMILY SSF56935 144 325 2.01E-46 T 05-07-2017 AC028_RS21465 a7a03cda4bfe99f13c11b0263811d11a 1074 SUPERFAMILY SSF56935 964 1021 2.01E-46 T 05-07-2017 AC028_RS21465 a7a03cda4bfe99f13c11b0263811d11a 1074 Pfam PF07715 TonB-dependent Receptor Plug Domain 145 245 2.2E-4 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS21465 a7a03cda4bfe99f13c11b0263811d11a 1074 Pfam PF13620 Carboxypeptidase regulatory-like domain 34 114 5.1E-16 T 05-07-2017 AC028_RS21465 a7a03cda4bfe99f13c11b0263811d11a 1074 Gene3D G3DSA:2.170.130.10 146 250 5.3E-6 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS21465 a7a03cda4bfe99f13c11b0263811d11a 1074 Gene3D G3DSA:2.60.40.1120 33 117 1.4E-11 T 05-07-2017 IPR014766 Carboxypeptidase, regulatory domain AC028_RS21465 a7a03cda4bfe99f13c11b0263811d11a 1074 Gene3D G3DSA:2.40.170.20 364 752 1.6E-36 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21465 a7a03cda4bfe99f13c11b0263811d11a 1074 Gene3D G3DSA:2.40.170.20 251 332 1.6E-36 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21465 a7a03cda4bfe99f13c11b0263811d11a 1074 Gene3D G3DSA:2.40.170.20 784 916 1.6E-36 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21465 a7a03cda4bfe99f13c11b0263811d11a 1074 Gene3D G3DSA:2.40.170.20 972 1016 1.6E-36 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS21465 a7a03cda4bfe99f13c11b0263811d11a 1074 SUPERFAMILY SSF49464 33 116 1.65E-11 T 05-07-2017 IPR008969 Carboxypeptidase-like, regulatory domain AC028_RS20360 afaf60f60494136e7856fa08cbc63d32 393 SUPERFAMILY SSF51905 1 189 4.53E-58 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS20360 afaf60f60494136e7856fa08cbc63d32 393 SUPERFAMILY SSF51905 336 391 4.53E-58 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS20360 afaf60f60494136e7856fa08cbc63d32 393 Pfam PF03486 HI0933-like protein 5 391 1.1E-142 T 05-07-2017 AC028_RS20360 afaf60f60494136e7856fa08cbc63d32 393 Gene3D G3DSA:3.50.50.60 2 187 9.8E-50 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS20360 afaf60f60494136e7856fa08cbc63d32 393 Gene3D G3DSA:3.50.50.60 338 391 9.8E-50 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS20360 afaf60f60494136e7856fa08cbc63d32 393 Gene3D G3DSA:1.10.8.260 269 320 9.3E-13 T 05-07-2017 IPR023166 HI0933 insert-like domain AC028_RS20360 afaf60f60494136e7856fa08cbc63d32 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 361 368 2.5E-9 T 05-07-2017 AC028_RS20360 afaf60f60494136e7856fa08cbc63d32 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.5E-9 T 05-07-2017 AC028_RS20360 afaf60f60494136e7856fa08cbc63d32 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 2.5E-9 T 05-07-2017 AC028_RS20360 afaf60f60494136e7856fa08cbc63d32 393 SUPERFAMILY SSF160996 191 339 1.19E-35 T 05-07-2017 AC028_RS20360 afaf60f60494136e7856fa08cbc63d32 393 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 390 2.6E-124 T 05-07-2017 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AC028_RS20360 afaf60f60494136e7856fa08cbc63d32 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 3.8E-6 T 05-07-2017 AC028_RS20360 afaf60f60494136e7856fa08cbc63d32 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.8E-6 T 05-07-2017 AC028_RS20360 afaf60f60494136e7856fa08cbc63d32 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 346 368 3.8E-6 T 05-07-2017 AC028_RS20360 afaf60f60494136e7856fa08cbc63d32 393 Gene3D G3DSA:2.40.30.10 189 268 6.9E-28 T 05-07-2017 AC028_RS03065 a549b6184f3a8feae8604ece2a9268ae 552 Pfam PF02225 PA domain 300 391 3.1E-16 T 05-07-2017 IPR003137 PA domain AC028_RS03065 a549b6184f3a8feae8604ece2a9268ae 552 Gene3D G3DSA:3.50.30.30 307 394 2.6E-26 T 05-07-2017 AC028_RS03065 a549b6184f3a8feae8604ece2a9268ae 552 Gene3D G3DSA:3.40.390.10 63 195 1.4E-4 T 05-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AC028_RS03065 a549b6184f3a8feae8604ece2a9268ae 552 Gene3D G3DSA:3.40.390.10 439 453 1.4E-4 T 05-07-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AC028_RS03065 a549b6184f3a8feae8604ece2a9268ae 552 SUPERFAMILY SSF52025 305 383 7.19E-14 T 05-07-2017 AC028_RS10320 0cc879df418cc9b5ccd41206986c7960 659 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 55 505 3.5E-154 T 05-07-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AC028_RS10320 0cc879df418cc9b5ccd41206986c7960 659 ProSitePatterns PS01303 BCCT family of transporters signature. 319 328 - T 05-07-2017 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 AC028_RS10320 0cc879df418cc9b5ccd41206986c7960 659 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 17 505 7.9E-177 T 05-07-2017 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AC028_RS15305 9959540fbd325c0df94fdaac4f466cfe 297 SUPERFAMILY SSF52540 2 226 1.78E-54 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS15305 9959540fbd325c0df94fdaac4f466cfe 297 Pfam PF00005 ABC transporter 18 167 3.6E-28 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS15305 9959540fbd325c0df94fdaac4f466cfe 297 Gene3D G3DSA:3.40.50.300 1 227 2.4E-60 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS15305 9959540fbd325c0df94fdaac4f466cfe 297 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS15305 9959540fbd325c0df94fdaac4f466cfe 297 SMART SM00382 26 216 6.3E-12 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS01570 06eed92edc60317859b6c99eb60839cc 565 Gene3D G3DSA:3.40.50.720 420 553 4.6E-36 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS01570 06eed92edc60317859b6c99eb60839cc 565 SUPERFAMILY SSF51735 422 553 9.86E-27 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS01570 06eed92edc60317859b6c99eb60839cc 565 Pfam PF00999 Sodium/hydrogen exchanger family 12 391 3.0E-81 T 05-07-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AC028_RS01570 06eed92edc60317859b6c99eb60839cc 565 Pfam PF02254 TrkA-N domain 425 537 1.6E-21 T 05-07-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AC028_RS19490 9f5aaccbbeb7b6ce3346404638cf0b74 252 Gene3D G3DSA:3.40.50.10320 40 231 2.2E-41 T 05-07-2017 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 AC028_RS19490 9f5aaccbbeb7b6ce3346404638cf0b74 252 SUPERFAMILY SSF102588 41 228 1.7E-45 T 05-07-2017 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 AC028_RS19490 9f5aaccbbeb7b6ce3346404638cf0b74 252 Pfam PF02585 GlcNAc-PI de-N-acetylase 45 169 2.4E-26 T 05-07-2017 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 AC028_RS07460 1535744b283e7bd92e873e01075dadc8 175 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 1 157 1.7E-44 T 05-07-2017 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 AC028_RS07460 1535744b283e7bd92e873e01075dadc8 175 Gene3D G3DSA:3.40.50.300 1 158 1.9E-55 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07460 1535744b283e7bd92e873e01075dadc8 175 SUPERFAMILY SSF52540 1 159 4.79E-26 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07460 1535744b283e7bd92e873e01075dadc8 175 Pfam PF01202 Shikimate kinase 4 157 6.0E-14 T 05-07-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AC028_RS03150 1fa1b9dda73b51f9f5c0d7ac1941e86e 191 Pfam PF04973 Nicotinamide mononucleotide transporter 2 180 7.3E-49 T 05-07-2017 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AC028_RS03150 1fa1b9dda73b51f9f5c0d7ac1941e86e 191 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 2 184 1.1E-22 T 05-07-2017 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AC028_RS05580 c938ff0cdf9c6219375cb9ebede9a7d1 557 SUPERFAMILY SSF56112 195 439 1.28E-32 T 05-07-2017 IPR011009 Protein kinase-like domain AC028_RS05580 c938ff0cdf9c6219375cb9ebede9a7d1 557 SUPERFAMILY SSF56112 92 160 1.28E-32 T 05-07-2017 IPR011009 Protein kinase-like domain AC028_RS05580 c938ff0cdf9c6219375cb9ebede9a7d1 557 Gene3D G3DSA:3.90.1200.10 243 323 7.2E-4 T 05-07-2017 AC028_RS05580 c938ff0cdf9c6219375cb9ebede9a7d1 557 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 554 49.628 T 05-07-2017 IPR010232 Probable protein kinase UbiB GO:0006744 AC028_RS05580 c938ff0cdf9c6219375cb9ebede9a7d1 557 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 5 449 1.6E-182 T 05-07-2017 IPR010232 Probable protein kinase UbiB GO:0006744 AC028_RS05580 c938ff0cdf9c6219375cb9ebede9a7d1 557 Pfam PF03109 ABC1 family 111 232 9.1E-30 T 05-07-2017 IPR004147 UbiB domain AC028_RS21920 7cd239cfe6299d6a0c42f27f506d8a87 446 Gene3D G3DSA:1.10.3860.10 5 420 5.4E-109 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS21920 7cd239cfe6299d6a0c42f27f506d8a87 446 PRINTS PR00173 Glutamate-aspartate symporter signature 370 390 4.2E-20 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS21920 7cd239cfe6299d6a0c42f27f506d8a87 446 PRINTS PR00173 Glutamate-aspartate symporter signature 206 225 4.2E-20 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS21920 7cd239cfe6299d6a0c42f27f506d8a87 446 PRINTS PR00173 Glutamate-aspartate symporter signature 308 334 4.2E-20 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS21920 7cd239cfe6299d6a0c42f27f506d8a87 446 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 4.2E-20 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS21920 7cd239cfe6299d6a0c42f27f506d8a87 446 PRINTS PR00173 Glutamate-aspartate symporter signature 343 362 4.2E-20 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS21920 7cd239cfe6299d6a0c42f27f506d8a87 446 PRINTS PR00173 Glutamate-aspartate symporter signature 159 181 4.2E-20 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS21920 7cd239cfe6299d6a0c42f27f506d8a87 446 PRINTS PR00173 Glutamate-aspartate symporter signature 10 30 4.2E-20 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS21920 7cd239cfe6299d6a0c42f27f506d8a87 446 Pfam PF00375 Sodium:dicarboxylate symporter family 12 415 1.4E-113 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS21920 7cd239cfe6299d6a0c42f27f506d8a87 446 SUPERFAMILY SSF118215 12 415 6.54E-103 T 05-07-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AC028_RS07780 ee13c0b8e6d5c75f08084ba6886877e3 346 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 27 328 2.7E-97 T 05-07-2017 IPR010732 Type VI secretion, TssG-like AC028_RS07780 ee13c0b8e6d5c75f08084ba6886877e3 346 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 27 328 1.3E-104 T 05-07-2017 IPR010732 Type VI secretion, TssG-like AC028_RS07385 2c17506f40d00a5b6307eca2f3019178 152 Pfam PF13437 HlyD family secretion protein 1 102 3.8E-7 T 05-07-2017 AC028_RS07385 2c17506f40d00a5b6307eca2f3019178 152 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 114 129 1.5E-14 T 05-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AC028_RS07385 2c17506f40d00a5b6307eca2f3019178 152 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 38 62 1.5E-14 T 05-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AC028_RS07385 2c17506f40d00a5b6307eca2f3019178 152 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 62 85 1.5E-14 T 05-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AC028_RS07385 2c17506f40d00a5b6307eca2f3019178 152 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 5 26 1.5E-14 T 05-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AC028_RS07385 2c17506f40d00a5b6307eca2f3019178 152 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 129 149 1.5E-14 T 05-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AC028_RS03685 631a2af69abde3df5b0de852f6d24592 115 Gene3D G3DSA:3.30.1330.40 10 113 5.2E-23 T 05-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AC028_RS03685 631a2af69abde3df5b0de852f6d24592 115 Pfam PF01042 Endoribonuclease L-PSP 10 113 1.4E-23 T 05-07-2017 IPR006175 YjgF/YER057c/UK114 family AC028_RS03685 631a2af69abde3df5b0de852f6d24592 115 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 05-07-2017 IPR019897 RidA, conserved site AC028_RS03685 631a2af69abde3df5b0de852f6d24592 115 SUPERFAMILY SSF55298 3 114 1.88E-29 T 05-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AC028_RS15995 62a1d7ab0eadb58c0c85ffeb15db1d0e 439 Pfam PF07690 Major Facilitator Superfamily 20 391 5.9E-21 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS15995 62a1d7ab0eadb58c0c85ffeb15db1d0e 439 Gene3D G3DSA:1.20.1250.20 243 435 5.8E-14 T 05-07-2017 AC028_RS15995 62a1d7ab0eadb58c0c85ffeb15db1d0e 439 Gene3D G3DSA:1.20.1250.20 13 207 1.1E-18 T 05-07-2017 AC028_RS15995 62a1d7ab0eadb58c0c85ffeb15db1d0e 439 SUPERFAMILY SSF103473 13 434 1.7E-37 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS09935 dcc05872ee0ce7d5a0fb1d14a0a3b4ca 648 SUPERFAMILY SSF63737 46 245 1.44E-37 T 05-07-2017 AC028_RS09935 dcc05872ee0ce7d5a0fb1d14a0a3b4ca 648 SMART SM01263 498 637 1.5E-46 T 05-07-2017 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 KEGG: 00590+3.3.2.6 AC028_RS09935 dcc05872ee0ce7d5a0fb1d14a0a3b4ca 648 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 228 243 1.4E-16 T 05-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AC028_RS09935 dcc05872ee0ce7d5a0fb1d14a0a3b4ca 648 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 183 198 1.4E-16 T 05-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AC028_RS09935 dcc05872ee0ce7d5a0fb1d14a0a3b4ca 648 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 329 344 1.4E-16 T 05-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AC028_RS09935 dcc05872ee0ce7d5a0fb1d14a0a3b4ca 648 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 302 312 1.4E-16 T 05-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AC028_RS09935 dcc05872ee0ce7d5a0fb1d14a0a3b4ca 648 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 348 360 1.4E-16 T 05-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AC028_RS09935 dcc05872ee0ce7d5a0fb1d14a0a3b4ca 648 Gene3D G3DSA:1.10.390.10 342 493 4.9E-36 T 05-07-2017 AC028_RS09935 dcc05872ee0ce7d5a0fb1d14a0a3b4ca 648 SUPERFAMILY SSF48371 501 637 1.67E-37 T 05-07-2017 IPR016024 Armadillo-type fold GO:0005488 AC028_RS09935 dcc05872ee0ce7d5a0fb1d14a0a3b4ca 648 Pfam PF01433 Peptidase family M1 58 422 3.5E-63 T 05-07-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AC028_RS09935 dcc05872ee0ce7d5a0fb1d14a0a3b4ca 648 Pfam PF09127 Leukotriene A4 hydrolase, C-terminal 520 636 7.5E-29 T 05-07-2017 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 KEGG: 00590+3.3.2.6 AC028_RS09935 dcc05872ee0ce7d5a0fb1d14a0a3b4ca 648 SUPERFAMILY SSF55486 250 491 4.4E-69 T 05-07-2017 AC028_RS03905 ef54c4a4c5eb4f29f8b110587e39425a 525 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 21 238 2.0E-69 T 05-07-2017 IPR007357 Deoxyribodipyrimidine photolyase-related protein AC028_RS03905 ef54c4a4c5eb4f29f8b110587e39425a 525 SUPERFAMILY SSF48173 245 502 6.28E-56 T 05-07-2017 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AC028_RS03905 ef54c4a4c5eb4f29f8b110587e39425a 525 Gene3D G3DSA:1.25.40.80 201 335 1.4E-12 T 05-07-2017 AC028_RS17810 7e8a2f8d082e694e6d0f83a92e68d55e 375 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 164 1.5E-69 T 05-07-2017 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 AC028_RS17810 7e8a2f8d082e694e6d0f83a92e68d55e 375 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 1 375 52.91 T 05-07-2017 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 AC028_RS17810 7e8a2f8d082e694e6d0f83a92e68d55e 375 SUPERFAMILY SSF54211 278 362 8.98E-31 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS17810 7e8a2f8d082e694e6d0f83a92e68d55e 375 Gene3D G3DSA:3.40.50.1000 3 155 7.3E-33 T 05-07-2017 IPR023214 HAD-like domain AC028_RS17810 7e8a2f8d082e694e6d0f83a92e68d55e 375 Pfam PF13242 HAD-hyrolase-like 102 153 6.5E-5 T 05-07-2017 AC028_RS17810 7e8a2f8d082e694e6d0f83a92e68d55e 375 Gene3D G3DSA:3.30.230.40 278 375 4.5E-32 T 05-07-2017 AC028_RS17810 7e8a2f8d082e694e6d0f83a92e68d55e 375 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 339 351 - T 05-07-2017 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AC028_RS17810 7e8a2f8d082e694e6d0f83a92e68d55e 375 Gene3D G3DSA:3.30.230.40 169 255 1.0E-37 T 05-07-2017 AC028_RS17810 7e8a2f8d082e694e6d0f83a92e68d55e 375 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 05-07-2017 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AC028_RS17810 7e8a2f8d082e694e6d0f83a92e68d55e 375 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 375 36.141 T 05-07-2017 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AC028_RS17810 7e8a2f8d082e694e6d0f83a92e68d55e 375 SUPERFAMILY SSF54211 169 253 1.9E-30 T 05-07-2017 IPR020568 Ribosomal protein S5 domain 2-type fold AC028_RS17810 7e8a2f8d082e694e6d0f83a92e68d55e 375 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 147 7.7E-20 T 05-07-2017 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AC028_RS17810 7e8a2f8d082e694e6d0f83a92e68d55e 375 SUPERFAMILY SSF56784 1 148 2.2E-31 T 05-07-2017 IPR023214 HAD-like domain AC028_RS17810 7e8a2f8d082e694e6d0f83a92e68d55e 375 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 143 8.9E-34 T 05-07-2017 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AC028_RS17810 7e8a2f8d082e694e6d0f83a92e68d55e 375 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 357 4.3E-64 T 05-07-2017 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AC028_RS13660 e8aa3f783bbbd1097c89c5ef767bf177 320 PIRSF PIRSF035875 5 296 1.3E-63 T 05-07-2017 IPR017039 Virulence factor BrkB AC028_RS13660 e8aa3f783bbbd1097c89c5ef767bf177 320 Pfam PF03631 Virulence factor BrkB 32 279 1.6E-49 T 05-07-2017 IPR017039 Virulence factor BrkB AC028_RS13660 e8aa3f783bbbd1097c89c5ef767bf177 320 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 22 278 4.1E-29 T 05-07-2017 IPR017039 Virulence factor BrkB AC028_RS13205 7c53c45c755b4b2c2241b33bdd3b5006 263 Pfam PF01578 Cytochrome C assembly protein 41 258 2.4E-32 T 05-07-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AC028_RS21295 cd12beb582a25a695fc437b78ad52108 99 Gene3D G3DSA:4.10.520.10 2 92 1.8E-36 T 05-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AC028_RS21295 cd12beb582a25a695fc437b78ad52108 99 SUPERFAMILY SSF47729 3 92 1.91E-32 T 05-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AC028_RS21295 cd12beb582a25a695fc437b78ad52108 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 8.2E-17 T 05-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AC028_RS21295 cd12beb582a25a695fc437b78ad52108 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 8.2E-17 T 05-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AC028_RS21295 cd12beb582a25a695fc437b78ad52108 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 8.2E-17 T 05-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AC028_RS21295 cd12beb582a25a695fc437b78ad52108 99 SMART SM00411 3 92 1.0E-42 T 05-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AC028_RS21295 cd12beb582a25a695fc437b78ad52108 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 05-07-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AC028_RS21295 cd12beb582a25a695fc437b78ad52108 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 96 6.9E-48 T 05-07-2017 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AC028_RS21295 cd12beb582a25a695fc437b78ad52108 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 29.832 T 05-07-2017 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AC028_RS21295 cd12beb582a25a695fc437b78ad52108 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 5.2E-32 T 05-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AC028_RS08215 76d103178e6f69eb6f98415f943ec06e 136 Pfam PF10825 Protein of unknown function (DUF2752) 40 84 1.2E-18 T 05-07-2017 IPR021215 Protein of unknown function DUF2752 AC028_RS04610 1153a7742398101d76fde0d41e0dde02 263 Pfam PF01061 ABC-2 type transporter 16 225 2.2E-35 T 05-07-2017 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AC028_RS04610 1153a7742398101d76fde0d41e0dde02 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 183 202 2.2E-5 T 05-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AC028_RS04610 1153a7742398101d76fde0d41e0dde02 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 65 87 2.2E-5 T 05-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AC028_RS04610 1153a7742398101d76fde0d41e0dde02 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 109 134 2.2E-5 T 05-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AC028_RS04610 1153a7742398101d76fde0d41e0dde02 263 PIRSF PIRSF006648 1 260 3.1E-28 T 05-07-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AC028_RS05800 0887aa8fa604c6d501e0a8fcef2412ae 364 SUPERFAMILY SSF52540 51 175 1.0E-12 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS05800 0887aa8fa604c6d501e0a8fcef2412ae 364 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 364 49.493 T 05-07-2017 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 AC028_RS05800 0887aa8fa604c6d501e0a8fcef2412ae 364 Gene3D G3DSA:3.40.50.300 22 171 3.7E-20 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS05800 0887aa8fa604c6d501e0a8fcef2412ae 364 Pfam PF03969 AFG1-like ATPase 4 359 3.5E-127 T 05-07-2017 IPR005654 ATPase, AFG1-like GO:0005524 AC028_RS02480 ddc9852e89e89cd56fde48d7b45ca867 352 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 8 351 2.9E-140 T 05-07-2017 IPR005883 Type IV pilus assembly protein PilM AC028_RS02480 ddc9852e89e89cd56fde48d7b45ca867 352 Gene3D G3DSA:3.30.420.40 194 313 1.1E-25 T 05-07-2017 AC028_RS02480 ddc9852e89e89cd56fde48d7b45ca867 352 Gene3D G3DSA:3.30.420.40 8 98 3.2E-5 T 05-07-2017 AC028_RS02480 ddc9852e89e89cd56fde48d7b45ca867 352 SUPERFAMILY SSF53067 190 350 5.5E-24 T 05-07-2017 AC028_RS02480 ddc9852e89e89cd56fde48d7b45ca867 352 SMART SM00842 11 178 0.01 T 05-07-2017 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AC028_RS02480 ddc9852e89e89cd56fde48d7b45ca867 352 SUPERFAMILY SSF53067 11 175 8.1E-9 T 05-07-2017 AC028_RS02480 ddc9852e89e89cd56fde48d7b45ca867 352 Pfam PF11104 Type IV pilus assembly protein PilM; 13 351 1.5E-133 T 05-07-2017 IPR005883 Type IV pilus assembly protein PilM AC028_RS02480 ddc9852e89e89cd56fde48d7b45ca867 352 PIRSF PIRSF019169 1 352 7.5E-128 T 05-07-2017 IPR005883 Type IV pilus assembly protein PilM AC028_RS17720 79eaa4464a0dc27d0aad46ba87c57115 257 SUPERFAMILY SSF53335 15 188 1.7E-28 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS17720 79eaa4464a0dc27d0aad46ba87c57115 257 Gene3D G3DSA:3.40.50.150 23 254 2.5E-25 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS17720 79eaa4464a0dc27d0aad46ba87c57115 257 Pfam PF08241 Methyltransferase domain 48 140 1.0E-14 T 05-07-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AC028_RS12235 0b88ce9c419fdecd436e97733bf8410c 318 Pfam PF01882 Protein of unknown function DUF58 211 288 7.5E-15 T 05-07-2017 IPR002881 Domain of unknown function DUF58 AC028_RS20415 cd300db6d3cb73e7778e475fe8b2bfd2 166 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 126 4.3E-31 T 05-07-2017 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AC028_RS20415 cd300db6d3cb73e7778e475fe8b2bfd2 166 Gene3D G3DSA:3.40.50.300 7 150 1.0E-39 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS20415 cd300db6d3cb73e7778e475fe8b2bfd2 166 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 138 3.6E-33 T 05-07-2017 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AC028_RS20415 cd300db6d3cb73e7778e475fe8b2bfd2 166 SUPERFAMILY SSF52540 28 146 4.77E-16 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS20215 b248e7c3af3ea672ab04243dede2de3a 281 SUPERFAMILY SSF50494 70 258 6.5E-11 T 05-07-2017 IPR009003 Peptidase S1, PA clan AC028_RS20215 b248e7c3af3ea672ab04243dede2de3a 281 Gene3D G3DSA:2.40.10.10 75 158 2.6E-5 T 05-07-2017 AC028_RS16660 f14b1c5dbbc09508d5f707cfbc780c8d 481 SMART SM00479 4 197 7.2E-6 T 05-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III AC028_RS16660 f14b1c5dbbc09508d5f707cfbc780c8d 481 Pfam PF08411 Exonuclease C-terminal 206 475 2.2E-91 T 05-07-2017 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 AC028_RS16660 f14b1c5dbbc09508d5f707cfbc780c8d 481 SUPERFAMILY SSF53098 2 477 2.94E-115 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS16660 f14b1c5dbbc09508d5f707cfbc780c8d 481 PIRSF PIRSF000977 1 481 6.9E-175 T 05-07-2017 IPR023607 Exodeoxyribonuclease I GO:0004529 AC028_RS16660 f14b1c5dbbc09508d5f707cfbc780c8d 481 Gene3D G3DSA:3.30.420.10 3 195 3.3E-72 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS16660 f14b1c5dbbc09508d5f707cfbc780c8d 481 Pfam PF00929 Exonuclease 7 185 1.4E-22 T 05-07-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III AC028_RS17850 21dc0dd252d5a7ce23e198b7e52d5ef5 232 Gene3D G3DSA:3.40.50.1000 4 230 6.0E-20 T 05-07-2017 IPR023214 HAD-like domain AC028_RS17850 21dc0dd252d5a7ce23e198b7e52d5ef5 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 117 197 2.6E-8 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS17850 21dc0dd252d5a7ce23e198b7e52d5ef5 232 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 3 230 40.182 T 05-07-2017 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 AC028_RS17850 21dc0dd252d5a7ce23e198b7e52d5ef5 232 SUPERFAMILY SSF56784 1 230 1.41E-58 T 05-07-2017 IPR023214 HAD-like domain AC028_RS17850 21dc0dd252d5a7ce23e198b7e52d5ef5 232 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 6 227 6.7E-79 T 05-07-2017 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 AC028_RS09420 7dbfcfb09af1b2bf3c89416c26ce4197 156 SUPERFAMILY SSF69635 53 133 2.51E-6 T 05-07-2017 AC028_RS09420 7dbfcfb09af1b2bf3c89416c26ce4197 156 Pfam PF05932 Tir chaperone protein (CesT) family 52 131 7.2E-6 T 05-07-2017 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AC028_RS18410 9a5bcb7e04047e30f1fb530e72ad46a7 337 Gene3D G3DSA:2.30.330.10 243 319 1.6E-10 T 05-07-2017 AC028_RS18410 9a5bcb7e04047e30f1fb530e72ad46a7 337 SUPERFAMILY SSF101801 249 321 2.22E-15 T 05-07-2017 IPR001543 Surface presentation of antigen (SpoA) AC028_RS18410 9a5bcb7e04047e30f1fb530e72ad46a7 337 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 5 318 4.1E-105 T 05-07-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AC028_RS18410 9a5bcb7e04047e30f1fb530e72ad46a7 337 SUPERFAMILY SSF103039 7 15 9.94E-20 T 05-07-2017 IPR028976 CheC-like domain AC028_RS18410 9a5bcb7e04047e30f1fb530e72ad46a7 337 SUPERFAMILY SSF103039 55 231 9.94E-20 T 05-07-2017 IPR028976 CheC-like domain AC028_RS18410 9a5bcb7e04047e30f1fb530e72ad46a7 337 Pfam PF02154 Flagellar motor switch protein FliM 38 230 7.9E-74 T 05-07-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AC028_RS18410 9a5bcb7e04047e30f1fb530e72ad46a7 337 PIRSF PIRSF002888 3 327 8.5E-93 T 05-07-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AC028_RS18410 9a5bcb7e04047e30f1fb530e72ad46a7 337 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 251 318 1.8E-19 T 05-07-2017 IPR001543 Surface presentation of antigen (SpoA) AC028_RS18410 9a5bcb7e04047e30f1fb530e72ad46a7 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 1.1E-24 T 05-07-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AC028_RS18410 9a5bcb7e04047e30f1fb530e72ad46a7 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 4 17 1.1E-24 T 05-07-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AC028_RS18410 9a5bcb7e04047e30f1fb530e72ad46a7 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 1.1E-24 T 05-07-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AC028_RS18410 9a5bcb7e04047e30f1fb530e72ad46a7 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 1.1E-24 T 05-07-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AC028_RS05190 5a94ebd9d01ae030478130cdeea86ba2 296 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 33 250 2.4E-49 T 05-07-2017 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AC028_RS05190 5a94ebd9d01ae030478130cdeea86ba2 296 Gene3D G3DSA:1.10.800.10 24 288 6.0E-97 T 05-07-2017 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 AC028_RS05190 5a94ebd9d01ae030478130cdeea86ba2 296 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 88 110 7.0E-13 T 05-07-2017 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AC028_RS05190 5a94ebd9d01ae030478130cdeea86ba2 296 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 195 213 7.0E-13 T 05-07-2017 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AC028_RS05190 5a94ebd9d01ae030478130cdeea86ba2 296 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 227 246 7.0E-13 T 05-07-2017 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AC028_RS05190 5a94ebd9d01ae030478130cdeea86ba2 296 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 26 267 3.7E-106 T 05-07-2017 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 AC028_RS05190 5a94ebd9d01ae030478130cdeea86ba2 296 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 131 142 - T 05-07-2017 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 AC028_RS05190 5a94ebd9d01ae030478130cdeea86ba2 296 SUPERFAMILY SSF56534 20 292 5.89E-103 T 05-07-2017 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AC028_RS20155 a5bb29bf7b24b26c8dfb4a65e2fbf2ef 145 SUPERFAMILY SSF82649 14 143 1.78E-42 T 05-07-2017 AC028_RS20155 a5bb29bf7b24b26c8dfb4a65e2fbf2ef 145 Gene3D G3DSA:3.90.1010.10 9 143 2.2E-51 T 05-07-2017 AC028_RS20155 a5bb29bf7b24b26c8dfb4a65e2fbf2ef 145 Pfam PF02657 Fe-S metabolism associated domain 21 138 5.4E-43 T 05-07-2017 IPR003808 Fe-S metabolism associated domain, SufE-like AC028_RS09250 ddebca5af673a3ec611b524c854a1410 380 Gene3D G3DSA:1.20.1250.20 37 164 3.8E-5 T 05-07-2017 AC028_RS09250 ddebca5af673a3ec611b524c854a1410 380 Gene3D G3DSA:1.20.1250.20 185 365 6.6E-10 T 05-07-2017 AC028_RS09250 ddebca5af673a3ec611b524c854a1410 380 SUPERFAMILY SSF103473 9 367 6.28E-25 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS07700 c24cf6fa160580c091f961c75872095e 351 SUPERFAMILY SSF54506 4 168 1.05E-62 T 05-07-2017 AC028_RS07700 c24cf6fa160580c091f961c75872095e 351 SUPERFAMILY SSF54506 172 350 5.96E-52 T 05-07-2017 AC028_RS07700 c24cf6fa160580c091f961c75872095e 351 Gene3D G3DSA:3.10.310.10 3 176 3.6E-76 T 05-07-2017 AC028_RS07700 c24cf6fa160580c091f961c75872095e 351 Pfam PF04303 PrpF protein 4 350 6.9E-109 T 05-07-2017 IPR007400 PrpF protein AC028_RS07700 c24cf6fa160580c091f961c75872095e 351 Gene3D G3DSA:3.10.310.10 177 331 7.7E-48 T 05-07-2017 AC028_RS04160 a3ee49b9494ded17a2a9d7451b90df81 220 Pfam PF11769 Protein of unknown function (DUF3313) 19 215 3.6E-46 T 05-07-2017 IPR021747 Protein of unknown function DUF3313 AC028_RS07680 4110fc62c6262535a33aa24e28e6c415 78 SUPERFAMILY SSF143800 2 77 4.32E-31 T 05-07-2017 AC028_RS07680 4110fc62c6262535a33aa24e28e6c415 78 Pfam PF00830 Ribosomal L28 family 3 62 3.4E-27 T 05-07-2017 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS07680 4110fc62c6262535a33aa24e28e6c415 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.613 T 05-07-2017 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS07680 4110fc62c6262535a33aa24e28e6c415 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 2.1E-26 T 05-07-2017 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS07680 4110fc62c6262535a33aa24e28e6c415 78 Gene3D G3DSA:2.30.170.40 2 78 1.4E-37 T 05-07-2017 AC028_RS03500 16354a4c763a506ef39862a2d43413b6 412 SUPERFAMILY SSF103473 5 400 8.11E-45 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS03500 16354a4c763a506ef39862a2d43413b6 412 Gene3D G3DSA:1.20.1250.20 217 398 2.0E-8 T 05-07-2017 AC028_RS03500 16354a4c763a506ef39862a2d43413b6 412 Gene3D G3DSA:1.20.1250.20 19 187 1.3E-15 T 05-07-2017 AC028_RS03500 16354a4c763a506ef39862a2d43413b6 412 Pfam PF07690 Major Facilitator Superfamily 20 361 2.9E-30 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS08450 3263843f58750c305ef413900b30c852 131 Pfam PF02592 Putative vitamin uptake transporter 4 121 1.1E-16 T 05-07-2017 IPR003744 Protein of unknown function DUF165 AC028_RS09205 3be735a9646f68a734b0f39e5869549c 62 Pfam PF14310 Fibronectin type III-like domain 15 48 1.2E-6 T 05-07-2017 IPR026891 Fibronectin type III-like domain AC028_RS04655 c37352c48684b0bdc97b547fd77de8d5 832 Gene3D G3DSA:3.20.70.20 199 415 5.1E-62 T 05-07-2017 AC028_RS04655 c37352c48684b0bdc97b547fd77de8d5 832 Gene3D G3DSA:3.20.70.20 478 659 5.1E-62 T 05-07-2017 AC028_RS04655 c37352c48684b0bdc97b547fd77de8d5 832 Gene3D G3DSA:3.20.70.20 700 818 5.1E-62 T 05-07-2017 AC028_RS04655 c37352c48684b0bdc97b547fd77de8d5 832 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 689 711 - T 05-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AC028_RS04655 c37352c48684b0bdc97b547fd77de8d5 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 573 596 1.7E-37 T 05-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AC028_RS04655 c37352c48684b0bdc97b547fd77de8d5 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 639 662 1.7E-37 T 05-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AC028_RS04655 c37352c48684b0bdc97b547fd77de8d5 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 700 727 1.7E-37 T 05-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AC028_RS04655 c37352c48684b0bdc97b547fd77de8d5 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 369 388 1.7E-37 T 05-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AC028_RS04655 c37352c48684b0bdc97b547fd77de8d5 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 512 523 1.7E-37 T 05-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AC028_RS04655 c37352c48684b0bdc97b547fd77de8d5 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 611 633 1.7E-37 T 05-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AC028_RS04655 c37352c48684b0bdc97b547fd77de8d5 832 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 211 819 1.4E-166 T 05-07-2017 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AC028_RS04655 c37352c48684b0bdc97b547fd77de8d5 832 SUPERFAMILY SSF51998 293 831 3.36E-162 T 05-07-2017 AC028_RS04655 c37352c48684b0bdc97b547fd77de8d5 832 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 207 290 6.3E-15 T 05-07-2017 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AC028_RS04655 c37352c48684b0bdc97b547fd77de8d5 832 SUPERFAMILY SSF48168 71 292 1.12E-48 T 05-07-2017 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AC028_RS04655 c37352c48684b0bdc97b547fd77de8d5 832 Pfam PF02867 Ribonucleotide reductase, barrel domain 294 816 4.0E-144 T 05-07-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AC028_RS17025 ce9e9c5cb21fcaa392a7e4c76f7a6b2a 231 Gene3D G3DSA:1.25.40.10 134 220 6.9E-9 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS17025 ce9e9c5cb21fcaa392a7e4c76f7a6b2a 231 SUPERFAMILY SSF48452 99 203 3.63E-8 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS17010 81e3cd5b3bb5d5f7a7fcf133ed1c939f 114 SUPERFAMILY SSF52172 1 114 1.71E-28 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS17010 81e3cd5b3bb5d5f7a7fcf133ed1c939f 114 Gene3D G3DSA:3.40.50.2300 1 114 8.0E-31 T 05-07-2017 AC028_RS17010 81e3cd5b3bb5d5f7a7fcf133ed1c939f 114 SMART SM00448 1 110 3.1E-18 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS17010 81e3cd5b3bb5d5f7a7fcf133ed1c939f 114 Pfam PF00072 Response regulator receiver domain 1 110 1.0E-19 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS20255 5d0e8e9f2e91265d3e1ace8f47a6f860 239 Gene3D G3DSA:3.40.50.150 27 220 2.2E-49 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS20255 5d0e8e9f2e91265d3e1ace8f47a6f860 239 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 233 1.7E-91 T 05-07-2017 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AC028_RS20255 5d0e8e9f2e91265d3e1ace8f47a6f860 239 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 14 239 39.833 T 05-07-2017 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AC028_RS20255 5d0e8e9f2e91265d3e1ace8f47a6f860 239 SUPERFAMILY SSF53335 18 234 1.18E-52 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS20255 5d0e8e9f2e91265d3e1ace8f47a6f860 239 Pfam PF13489 Methyltransferase domain 50 207 2.9E-28 T 05-07-2017 AC028_RS21895 87e3a0bd97ad72e0de163701c6a1dfdb 159 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 135 4.3E-10 T 05-07-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 AC028_RS21895 87e3a0bd97ad72e0de163701c6a1dfdb 159 Gene3D G3DSA:3.10.50.40 121 141 3.1E-19 T 05-07-2017 AC028_RS21895 87e3a0bd97ad72e0de163701c6a1dfdb 159 Gene3D G3DSA:3.10.50.40 2 69 3.1E-19 T 05-07-2017 AC028_RS21895 87e3a0bd97ad72e0de163701c6a1dfdb 159 SUPERFAMILY SSF54534 2 139 2.16E-33 T 05-07-2017 AC028_RS13735 85ce45f42773c4ec6f5b54c72de79b39 268 SUPERFAMILY SSF55846 36 189 1.03E-47 T 05-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AC028_RS13735 85ce45f42773c4ec6f5b54c72de79b39 268 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 48 174 1.4E-22 T 05-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AC028_RS13735 85ce45f42773c4ec6f5b54c72de79b39 268 SMART SM00644 38 173 1.6E-26 T 05-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AC028_RS13735 85ce45f42773c4ec6f5b54c72de79b39 268 Gene3D G3DSA:3.40.80.10 36 191 6.0E-53 T 05-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AC028_RS13615 a4d29e7e1f2472742adeb0491eabc1f4 291 Gene3D G3DSA:1.10.287.70 8 74 4.7E-21 T 05-07-2017 AC028_RS13615 a4d29e7e1f2472742adeb0491eabc1f4 291 Pfam PF00510 Cytochrome c oxidase subunit III 10 112 4.0E-16 T 05-07-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13615 a4d29e7e1f2472742adeb0491eabc1f4 291 Pfam PF00510 Cytochrome c oxidase subunit III 150 290 1.8E-44 T 05-07-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13615 a4d29e7e1f2472742adeb0491eabc1f4 291 SUPERFAMILY SSF81452 9 291 4.5E-84 T 05-07-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13615 a4d29e7e1f2472742adeb0491eabc1f4 291 Gene3D G3DSA:1.20.120.80 77 290 9.0E-67 T 05-07-2017 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS04725 42ce4a84b9e2d109a7087fc5d7b52977 257 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 30 167 2.9E-22 T 05-07-2017 IPR014030 Beta-ketoacyl synthase, N-terminal AC028_RS04725 42ce4a84b9e2d109a7087fc5d7b52977 257 SUPERFAMILY SSF53901 6 183 2.08E-9 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS13825 1c558cdc2b868f1c3db4f2e95a8ab4ce 87 Gene3D G3DSA:3.10.350.10 47 87 8.7E-5 T 05-07-2017 IPR018392 LysM domain AC028_RS13825 1c558cdc2b868f1c3db4f2e95a8ab4ce 87 Pfam PF01476 LysM domain 47 87 3.0E-7 T 05-07-2017 IPR018392 LysM domain AC028_RS14330 463654a8e7f886888eefa69626c4ff1f 204 Pfam PF13628 Domain of unknown function (DUF4142) 62 196 1.8E-19 T 05-07-2017 IPR025419 Domain of unknown function DUF4142 AC028_RS20675 0341e0df800fdca10b11e0a2a74279d1 438 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 306 321 9.0E-5 T 05-07-2017 AC028_RS20675 0341e0df800fdca10b11e0a2a74279d1 438 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 43 65 9.0E-5 T 05-07-2017 AC028_RS20675 0341e0df800fdca10b11e0a2a74279d1 438 SUPERFAMILY SSF51905 357 431 1.1E-38 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS20675 0341e0df800fdca10b11e0a2a74279d1 438 SUPERFAMILY SSF51905 41 265 1.1E-38 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS20675 0341e0df800fdca10b11e0a2a74279d1 438 Gene3D G3DSA:3.50.50.60 185 264 4.3E-47 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS20675 0341e0df800fdca10b11e0a2a74279d1 438 Gene3D G3DSA:3.50.50.60 31 132 4.3E-47 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS20675 0341e0df800fdca10b11e0a2a74279d1 438 Gene3D G3DSA:3.50.50.60 357 414 4.3E-47 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS20675 0341e0df800fdca10b11e0a2a74279d1 438 Pfam PF01266 FAD dependent oxidoreductase 43 393 2.4E-49 T 05-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AC028_RS17035 82b785c1a552a9cc345afd6e9bbb3064 180 SUPERFAMILY SSF52833 33 175 3.0E-33 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS17035 82b785c1a552a9cc345afd6e9bbb3064 180 Pfam PF08534 Redoxin 38 161 6.0E-16 T 05-07-2017 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AC028_RS17035 82b785c1a552a9cc345afd6e9bbb3064 180 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 4 172 1.2E-49 T 05-07-2017 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AC028_RS17035 82b785c1a552a9cc345afd6e9bbb3064 180 Gene3D G3DSA:3.40.30.10 4 174 2.0E-38 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS09820 70a9c1c544b7c64a5e80513feb47c7d2 304 Gene3D G3DSA:3.40.190.10 109 197 2.6E-38 T 05-07-2017 AC028_RS09820 70a9c1c544b7c64a5e80513feb47c7d2 304 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 1.3E-42 T 05-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS09820 70a9c1c544b7c64a5e80513feb47c7d2 304 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 1.3E-42 T 05-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS09820 70a9c1c544b7c64a5e80513feb47c7d2 304 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 1.3E-42 T 05-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS09820 70a9c1c544b7c64a5e80513feb47c7d2 304 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 1.3E-42 T 05-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS09820 70a9c1c544b7c64a5e80513feb47c7d2 304 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 1.3E-42 T 05-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS09820 70a9c1c544b7c64a5e80513feb47c7d2 304 Gene3D G3DSA:3.40.190.10 2 108 2.9E-44 T 05-07-2017 AC028_RS09820 70a9c1c544b7c64a5e80513feb47c7d2 304 PIRSF PIRSF001438 1 304 2.2E-113 T 05-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS09820 70a9c1c544b7c64a5e80513feb47c7d2 304 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 224 293 8.9E-14 T 05-07-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS09820 70a9c1c544b7c64a5e80513feb47c7d2 304 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 210 7.4E-76 T 05-07-2017 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS09820 70a9c1c544b7c64a5e80513feb47c7d2 304 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 05-07-2017 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS09820 70a9c1c544b7c64a5e80513feb47c7d2 304 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 294 1.4E-102 T 05-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS09820 70a9c1c544b7c64a5e80513feb47c7d2 304 SUPERFAMILY SSF54782 221 303 9.55E-23 T 05-07-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS09820 70a9c1c544b7c64a5e80513feb47c7d2 304 SUPERFAMILY SSF53850 2 216 7.96E-82 T 05-07-2017 AC028_RS09820 70a9c1c544b7c64a5e80513feb47c7d2 304 Gene3D G3DSA:3.30.160.40 221 303 4.8E-24 T 05-07-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS09820 70a9c1c544b7c64a5e80513feb47c7d2 304 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 37.601 T 05-07-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AC028_RS15700 3898dacc8fa557a1c708d972d2e7b190 276 Pfam PF00899 ThiF family 20 162 1.5E-34 T 05-07-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AC028_RS15700 3898dacc8fa557a1c708d972d2e7b190 276 SUPERFAMILY SSF69572 6 260 7.19E-56 T 05-07-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AC028_RS15700 3898dacc8fa557a1c708d972d2e7b190 276 Gene3D G3DSA:3.40.50.720 4 260 2.4E-44 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS05760 b8182069f43b01f12b3846866c5550bf 214 SUPERFAMILY SSF49478 138 188 1.33E-6 T 05-07-2017 AC028_RS14335 54e7e3931006c3fd6569b4c79c207ae9 60 Pfam PF12244 Protein of unknown function (DUF3606) 6 56 1.8E-17 T 05-07-2017 IPR022037 Protein of unknown function DUF3606 AC028_RS10075 8d02cb475bfc380a21b42d59074cb19d 302 Pfam PF03466 LysR substrate binding domain 94 292 6.0E-39 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS10075 8d02cb475bfc380a21b42d59074cb19d 302 SUPERFAMILY SSF46785 3 113 1.27E-22 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS10075 8d02cb475bfc380a21b42d59074cb19d 302 Gene3D G3DSA:1.10.10.10 4 87 4.0E-24 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS10075 8d02cb475bfc380a21b42d59074cb19d 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.2E-17 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS10075 8d02cb475bfc380a21b42d59074cb19d 302 SUPERFAMILY SSF53850 94 295 4.02E-41 T 05-07-2017 AC028_RS10075 8d02cb475bfc380a21b42d59074cb19d 302 Gene3D G3DSA:3.40.190.10 94 177 3.8E-21 T 05-07-2017 AC028_RS10075 8d02cb475bfc380a21b42d59074cb19d 302 Gene3D G3DSA:3.40.190.10 178 264 2.3E-20 T 05-07-2017 AC028_RS21445 5b733f131d0c3f0725db88d68dc37c01 388 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 5 29 1.1E-7 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS21445 5b733f131d0c3f0725db88d68dc37c01 388 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS21445 5b733f131d0c3f0725db88d68dc37c01 388 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 6.1E-4 T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS21445 5b733f131d0c3f0725db88d68dc37c01 388 Pfam PF16074 Type IV Pilus-assembly protein W 243 381 2.0E-23 T 05-07-2017 IPR032092 Type IV Pilus-assembly protein W GO:0043683 AC028_RS21760 4bb1f6ee61242018bfbd8439bd49233d 472 Pfam PF01476 LysM domain 424 467 1.2E-9 T 05-07-2017 IPR018392 LysM domain AC028_RS21760 4bb1f6ee61242018bfbd8439bd49233d 472 SUPERFAMILY SSF54106 422 467 2.49E-7 T 05-07-2017 IPR018392 LysM domain AC028_RS21760 4bb1f6ee61242018bfbd8439bd49233d 472 SUPERFAMILY SSF53955 140 286 1.88E-34 T 05-07-2017 IPR023346 Lysozyme-like domain AC028_RS21760 4bb1f6ee61242018bfbd8439bd49233d 472 Gene3D G3DSA:3.10.350.10 422 467 8.9E-13 T 05-07-2017 IPR018392 LysM domain AC028_RS21760 4bb1f6ee61242018bfbd8439bd49233d 472 SMART SM00257 423 468 7.4E-10 T 05-07-2017 IPR018392 LysM domain AC028_RS21760 4bb1f6ee61242018bfbd8439bd49233d 472 Pfam PF01464 Transglycosylase SLT domain 143 250 2.4E-22 T 05-07-2017 IPR008258 Transglycosylase SLT domain 1 AC028_RS21760 4bb1f6ee61242018bfbd8439bd49233d 472 Gene3D G3DSA:1.10.530.10 137 291 1.5E-36 T 05-07-2017 AC028_RS19825 b2831923ed348295c0221fe1fbf416ee 89 SUPERFAMILY SSF82657 2 87 6.54E-25 T 05-07-2017 IPR002634 BolA protein AC028_RS19825 b2831923ed348295c0221fe1fbf416ee 89 Gene3D G3DSA:3.30.70.1500 2 82 3.1E-27 T 05-07-2017 AC028_RS19825 b2831923ed348295c0221fe1fbf416ee 89 Pfam PF01722 BolA-like protein 11 87 7.0E-28 T 05-07-2017 IPR002634 BolA protein AC028_RS19825 b2831923ed348295c0221fe1fbf416ee 89 PIRSF PIRSF003113 1 89 5.0E-26 T 05-07-2017 IPR002634 BolA protein AC028_RS04830 105ebb3fa195f785c1bf3e26e9e21c34 789 SUPERFAMILY SSF53474 532 787 4.37E-60 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS04830 105ebb3fa195f785c1bf3e26e9e21c34 789 SUPERFAMILY SSF82171 45 180 1.09E-36 T 05-07-2017 AC028_RS04830 105ebb3fa195f785c1bf3e26e9e21c34 789 SUPERFAMILY SSF82171 220 289 1.09E-36 T 05-07-2017 AC028_RS04830 105ebb3fa195f785c1bf3e26e9e21c34 789 SUPERFAMILY SSF82171 323 531 1.09E-36 T 05-07-2017 AC028_RS04830 105ebb3fa195f785c1bf3e26e9e21c34 789 Gene3D G3DSA:2.140.10.30 23 160 4.3E-36 T 05-07-2017 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AC028_RS04830 105ebb3fa195f785c1bf3e26e9e21c34 789 Gene3D G3DSA:2.140.10.30 201 516 4.3E-36 T 05-07-2017 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AC028_RS04830 105ebb3fa195f785c1bf3e26e9e21c34 789 Gene3D G3DSA:3.40.50.1820 532 787 2.8E-69 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS04830 105ebb3fa195f785c1bf3e26e9e21c34 789 Pfam PF00326 Prolyl oligopeptidase family 592 788 3.7E-42 T 05-07-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AC028_RS04830 105ebb3fa195f785c1bf3e26e9e21c34 789 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 339 500 2.2E-15 T 05-07-2017 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AC028_RS03845 61a9784db1ddfe2ff3bd64f60587b9e9 185 Pfam PF04519 Polymer-forming cytoskeletal 63 158 2.4E-22 T 05-07-2017 IPR007607 Protein of unknown function DUF583 AC028_RS06940 cb707146dacfb029aba74fa02892ba05 412 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 44 396 5.8E-98 T 05-07-2017 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 AC028_RS06940 cb707146dacfb029aba74fa02892ba05 412 SUPERFAMILY SSF51556 30 274 2.86E-82 T 05-07-2017 IPR032466 Metal-dependent hydrolase AC028_RS06940 cb707146dacfb029aba74fa02892ba05 412 SUPERFAMILY SSF51556 319 400 2.86E-82 T 05-07-2017 IPR032466 Metal-dependent hydrolase AC028_RS06940 cb707146dacfb029aba74fa02892ba05 412 Gene3D G3DSA:3.20.20.140 32 402 4.2E-105 T 05-07-2017 AC028_RS17030 c7d411ab25d8d4aab9db9f1dc8395fd7 143 Pfam PF03918 Cytochrome C biogenesis protein 11 134 9.8E-47 T 05-07-2017 IPR005616 CcmH/CycL/Ccl2/NrfF family AC028_RS06625 e1676fe9d9992201ad296f14561c42db 314 Pfam PF13437 HlyD family secretion protein 160 239 4.3E-14 T 05-07-2017 AC028_RS06625 e1676fe9d9992201ad296f14561c42db 314 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 238 1.1E-32 T 05-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AC028_RS06625 e1676fe9d9992201ad296f14561c42db 314 Pfam PF13533 Biotin-lipoyl like 51 99 3.1E-14 T 05-07-2017 AC028_RS06625 e1676fe9d9992201ad296f14561c42db 314 Gene3D G3DSA:2.40.50.100 157 189 2.2E-18 T 05-07-2017 AC028_RS06625 e1676fe9d9992201ad296f14561c42db 314 Gene3D G3DSA:2.40.50.100 51 84 2.2E-18 T 05-07-2017 AC028_RS06625 e1676fe9d9992201ad296f14561c42db 314 SUPERFAMILY SSF111369 49 205 1.44E-23 T 05-07-2017 AC028_RS19450 6da03d541d51ffadfcd52082e5762fcc 370 SUPERFAMILY SSF55729 162 267 3.38E-11 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS19450 6da03d541d51ffadfcd52082e5762fcc 370 Pfam PF13527 Acetyltransferase (GNAT) domain 191 266 7.8E-8 T 05-07-2017 AC028_RS19450 6da03d541d51ffadfcd52082e5762fcc 370 Gene3D G3DSA:3.40.630.30 161 268 6.2E-7 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS15680 d37dfe7764c3212e3e9844a4ddf7d944 161 Pfam PF04306 Protein of unknown function (DUF456) 23 158 4.8E-42 T 05-07-2017 IPR007403 Protein of unknown function DUF456 AC028_RS03450 247a2aa943dd74bcf3c049f3f3cd75e3 94 Pfam PF12728 Helix-turn-helix domain 22 72 3.6E-10 T 05-07-2017 AC028_RS03450 247a2aa943dd74bcf3c049f3f3cd75e3 94 SUPERFAMILY SSF46955 21 76 2.93E-8 T 05-07-2017 IPR009061 Putative DNA-binding domain AC028_RS03450 247a2aa943dd74bcf3c049f3f3cd75e3 94 Gene3D G3DSA:1.10.10.10 21 77 4.1E-6 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS12305 ea9f60f23457a052ffafde62d85be9e0 411 PIRSF PIRSF000447 1 411 2.1E-183 T 05-07-2017 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AC028_RS12305 ea9f60f23457a052ffafde62d85be9e0 411 SUPERFAMILY SSF53901 213 410 3.42E-73 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS12305 ea9f60f23457a052ffafde62d85be9e0 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 246 2.4E-58 T 05-07-2017 IPR014030 Beta-ketoacyl synthase, N-terminal AC028_RS12305 ea9f60f23457a052ffafde62d85be9e0 411 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 05-07-2017 IPR018201 Beta-ketoacyl synthase, active site AC028_RS12305 ea9f60f23457a052ffafde62d85be9e0 411 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 409 7.6E-198 T 05-07-2017 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AC028_RS12305 ea9f60f23457a052ffafde62d85be9e0 411 Gene3D G3DSA:3.40.47.10 7 259 2.9E-75 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS12305 ea9f60f23457a052ffafde62d85be9e0 411 Gene3D G3DSA:3.40.47.10 262 410 1.5E-63 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS12305 ea9f60f23457a052ffafde62d85be9e0 411 SUPERFAMILY SSF53901 3 251 1.7E-76 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS12305 ea9f60f23457a052ffafde62d85be9e0 411 SMART SM00825 Beta-ketoacyl synthase 5 411 2.6E-15 T 05-07-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AC028_RS12305 ea9f60f23457a052ffafde62d85be9e0 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 2.3E-38 T 05-07-2017 IPR014031 Beta-ketoacyl synthase, C-terminal AC028_RS17370 b9ceb4ab60abd2dd8289954b04055a02 344 PRINTS PR00142 RecA protein signature 165 194 2.8E-85 T 05-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AC028_RS17370 b9ceb4ab60abd2dd8289954b04055a02 344 PRINTS PR00142 RecA protein signature 212 240 2.8E-85 T 05-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AC028_RS17370 b9ceb4ab60abd2dd8289954b04055a02 344 PRINTS PR00142 RecA protein signature 299 316 2.8E-85 T 05-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AC028_RS17370 b9ceb4ab60abd2dd8289954b04055a02 344 PRINTS PR00142 RecA protein signature 127 156 2.8E-85 T 05-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AC028_RS17370 b9ceb4ab60abd2dd8289954b04055a02 344 PRINTS PR00142 RecA protein signature 245 274 2.8E-85 T 05-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AC028_RS17370 b9ceb4ab60abd2dd8289954b04055a02 344 PRINTS PR00142 RecA protein signature 93 122 2.8E-85 T 05-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AC028_RS17370 b9ceb4ab60abd2dd8289954b04055a02 344 SUPERFAMILY SSF52540 4 269 7.02E-66 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS17370 b9ceb4ab60abd2dd8289954b04055a02 344 Gene3D G3DSA:3.30.250.10 270 328 3.9E-28 T 05-07-2017 IPR023400 DNA recombination and repair protein RecA, C-terminal AC028_RS17370 b9ceb4ab60abd2dd8289954b04055a02 344 Pfam PF00154 recA bacterial DNA recombination protein 7 270 3.3E-140 T 05-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AC028_RS17370 b9ceb4ab60abd2dd8289954b04055a02 344 ProSitePatterns PS00321 recA signature. 215 223 - T 05-07-2017 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AC028_RS17370 b9ceb4ab60abd2dd8289954b04055a02 344 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 326 3.0E-166 T 05-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AC028_RS17370 b9ceb4ab60abd2dd8289954b04055a02 344 Hamap MF_00268 Protein RecA [recA]. 5 331 50.729 T 05-07-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AC028_RS17370 b9ceb4ab60abd2dd8289954b04055a02 344 SMART SM00382 57 230 2.8E-11 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS17370 b9ceb4ab60abd2dd8289954b04055a02 344 SUPERFAMILY SSF54752 270 327 6.93E-21 T 05-07-2017 IPR023400 DNA recombination and repair protein RecA, C-terminal AC028_RS17370 b9ceb4ab60abd2dd8289954b04055a02 344 Gene3D G3DSA:3.40.50.300 34 269 1.7E-79 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS10925 3c81b12f4a8ce9ab43e06d5e8b6d9458 827 Pfam PF02687 FtsX-like permease family 706 820 3.3E-15 T 05-07-2017 IPR003838 ABC transporter permease protein domain GO:0016020 AC028_RS10925 3c81b12f4a8ce9ab43e06d5e8b6d9458 827 Pfam PF02687 FtsX-like permease family 259 375 4.3E-14 T 05-07-2017 IPR003838 ABC transporter permease protein domain GO:0016020 AC028_RS06630 efc3f7c7e724a86bfbc5c238130159ec 486 Gene3D G3DSA:1.20.1600.10 150 323 3.0E-85 T 05-07-2017 AC028_RS06630 efc3f7c7e724a86bfbc5c238130159ec 486 Gene3D G3DSA:1.20.1600.10 60 98 3.0E-85 T 05-07-2017 AC028_RS06630 efc3f7c7e724a86bfbc5c238130159ec 486 Gene3D G3DSA:1.20.1600.10 359 473 3.0E-85 T 05-07-2017 AC028_RS06630 efc3f7c7e724a86bfbc5c238130159ec 486 Gene3D G3DSA:2.20.200.10 324 356 2.7E-8 T 05-07-2017 AC028_RS06630 efc3f7c7e724a86bfbc5c238130159ec 486 Gene3D G3DSA:2.20.200.10 112 149 2.7E-8 T 05-07-2017 AC028_RS06630 efc3f7c7e724a86bfbc5c238130159ec 486 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 14 472 2.2E-89 T 05-07-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AC028_RS06630 efc3f7c7e724a86bfbc5c238130159ec 486 SUPERFAMILY SSF56954 5 31 7.72E-89 T 05-07-2017 AC028_RS06630 efc3f7c7e724a86bfbc5c238130159ec 486 SUPERFAMILY SSF56954 63 475 7.72E-89 T 05-07-2017 AC028_RS06630 efc3f7c7e724a86bfbc5c238130159ec 486 Pfam PF02321 Outer membrane efflux protein 72 262 9.5E-17 T 05-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AC028_RS06630 efc3f7c7e724a86bfbc5c238130159ec 486 Pfam PF02321 Outer membrane efflux protein 293 470 5.8E-23 T 05-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AC028_RS09235 cc5d81947c1d73cda053c454735b52b4 340 SMART SM00612 159 208 0.073 T 05-07-2017 IPR006652 Kelch repeat type 1 GO:0005515 AC028_RS09235 cc5d81947c1d73cda053c454735b52b4 340 SMART SM00612 209 264 0.11 T 05-07-2017 IPR006652 Kelch repeat type 1 GO:0005515 AC028_RS09235 cc5d81947c1d73cda053c454735b52b4 340 SMART SM00612 265 313 0.24 T 05-07-2017 IPR006652 Kelch repeat type 1 GO:0005515 AC028_RS09235 cc5d81947c1d73cda053c454735b52b4 340 SMART SM00612 106 156 0.0044 T 05-07-2017 IPR006652 Kelch repeat type 1 GO:0005515 AC028_RS09235 cc5d81947c1d73cda053c454735b52b4 340 Pfam PF13964 Kelch motif 253 303 1.8E-6 T 05-07-2017 AC028_RS09235 cc5d81947c1d73cda053c454735b52b4 340 Pfam PF13964 Kelch motif 98 146 3.9E-6 T 05-07-2017 AC028_RS09235 cc5d81947c1d73cda053c454735b52b4 340 Pfam PF13964 Kelch motif 52 92 1.1E-6 T 05-07-2017 AC028_RS09235 cc5d81947c1d73cda053c454735b52b4 340 Pfam PF01344 Kelch motif 198 245 2.6E-4 T 05-07-2017 IPR006652 Kelch repeat type 1 GO:0005515 AC028_RS09235 cc5d81947c1d73cda053c454735b52b4 340 Pfam PF01344 Kelch motif 147 193 1.0E-6 T 05-07-2017 IPR006652 Kelch repeat type 1 GO:0005515 AC028_RS09235 cc5d81947c1d73cda053c454735b52b4 340 Gene3D G3DSA:2.120.10.80 76 334 3.1E-53 T 05-07-2017 IPR015915 Kelch-type beta propeller GO:0005515 AC028_RS09235 cc5d81947c1d73cda053c454735b52b4 340 SUPERFAMILY SSF117281 76 336 1.57E-54 T 05-07-2017 AC028_RS19815 f31de6c9071b36eb998b7e0dd33f2da7 992 Pfam PF13620 Carboxypeptidase regulatory-like domain 39 113 6.4E-11 T 05-07-2017 AC028_RS19815 f31de6c9071b36eb998b7e0dd33f2da7 992 SUPERFAMILY SSF56935 793 990 2.23E-58 T 05-07-2017 AC028_RS19815 f31de6c9071b36eb998b7e0dd33f2da7 992 SUPERFAMILY SSF56935 121 589 2.23E-58 T 05-07-2017 AC028_RS19815 f31de6c9071b36eb998b7e0dd33f2da7 992 SUPERFAMILY SSF56935 719 766 2.23E-58 T 05-07-2017 AC028_RS19815 f31de6c9071b36eb998b7e0dd33f2da7 992 SUPERFAMILY SSF56935 618 659 2.23E-58 T 05-07-2017 AC028_RS19815 f31de6c9071b36eb998b7e0dd33f2da7 992 Gene3D G3DSA:2.40.170.20 255 579 7.1E-47 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS19815 f31de6c9071b36eb998b7e0dd33f2da7 992 Gene3D G3DSA:2.40.170.20 706 989 7.1E-47 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS19815 f31de6c9071b36eb998b7e0dd33f2da7 992 Gene3D G3DSA:2.40.170.20 621 662 7.1E-47 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS19815 f31de6c9071b36eb998b7e0dd33f2da7 992 SUPERFAMILY SSF49452 32 113 8.24E-8 T 05-07-2017 IPR013784 Carbohydrate-binding-like fold GO:0030246 AC028_RS19815 f31de6c9071b36eb998b7e0dd33f2da7 992 Gene3D G3DSA:2.60.40.1120 39 112 2.6E-6 T 05-07-2017 IPR014766 Carboxypeptidase, regulatory domain AC028_RS19815 f31de6c9071b36eb998b7e0dd33f2da7 992 Gene3D G3DSA:2.170.130.10 145 248 2.8E-4 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS12415 69d676d89601e573cfaa033eb5a1c298 160 SUPERFAMILY SSF52833 1 157 3.22E-34 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS12415 69d676d89601e573cfaa033eb5a1c298 160 Pfam PF08534 Redoxin 5 155 3.5E-33 T 05-07-2017 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AC028_RS12415 69d676d89601e573cfaa033eb5a1c298 160 Gene3D G3DSA:3.40.30.10 1 158 3.3E-58 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS05215 92da1f7c2b31c8863d79a2be3e888e95 281 SUPERFAMILY SSF52540 16 108 2.47E-49 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS05215 92da1f7c2b31c8863d79a2be3e888e95 281 SUPERFAMILY SSF52540 135 257 2.47E-49 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS05215 92da1f7c2b31c8863d79a2be3e888e95 281 SMART SM00382 45 250 2.1E-11 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS05215 92da1f7c2b31c8863d79a2be3e888e95 281 Gene3D G3DSA:3.40.50.300 18 256 1.9E-49 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS05215 92da1f7c2b31c8863d79a2be3e888e95 281 Pfam PF00005 ABC transporter 36 193 3.1E-21 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS15600 3878cdaabbce3e869830e8389ab5dd54 589 Gene3D G3DSA:3.40.630.10 28 321 9.1E-39 T 05-07-2017 AC028_RS15600 3878cdaabbce3e869830e8389ab5dd54 589 SMART SM00631 40 273 1.3E-4 T 05-07-2017 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AC028_RS15600 3878cdaabbce3e869830e8389ab5dd54 589 SUPERFAMILY SSF53187 38 322 1.22E-50 T 05-07-2017 AC028_RS15600 3878cdaabbce3e869830e8389ab5dd54 589 Pfam PF00246 Zinc carboxypeptidase 45 216 1.1E-37 T 05-07-2017 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AC028_RS11385 0c61401d64d9e22f5431fd08a1590c53 187 Gene3D G3DSA:1.10.10.10 123 185 3.3E-21 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS11385 0c61401d64d9e22f5431fd08a1590c53 187 Gene3D G3DSA:1.10.1740.10 22 89 1.0E-6 T 05-07-2017 AC028_RS11385 0c61401d64d9e22f5431fd08a1590c53 187 Pfam PF04542 Sigma-70 region 2 30 89 2.5E-5 T 05-07-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS11385 0c61401d64d9e22f5431fd08a1590c53 187 Pfam PF08281 Sigma-70, region 4 127 179 1.9E-17 T 05-07-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS11385 0c61401d64d9e22f5431fd08a1590c53 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 182 3.2E-23 T 05-07-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS11385 0c61401d64d9e22f5431fd08a1590c53 187 SUPERFAMILY SSF88659 120 184 4.11E-16 T 05-07-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS11385 0c61401d64d9e22f5431fd08a1590c53 187 SUPERFAMILY SSF88946 24 95 1.53E-7 T 05-07-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AC028_RS05380 8b4ccab48f016502fb3e6825529f5f59 165 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 89 98 1.6E-7 T 05-07-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS05380 8b4ccab48f016502fb3e6825529f5f59 165 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 52 74 1.6E-7 T 05-07-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS05380 8b4ccab48f016502fb3e6825529f5f59 165 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 130 156 1.6E-7 T 05-07-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS05380 8b4ccab48f016502fb3e6825529f5f59 165 SUPERFAMILY SSF49329 10 155 4.84E-43 T 05-07-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS05380 8b4ccab48f016502fb3e6825529f5f59 165 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 19 155 6.8E-44 T 05-07-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS05380 8b4ccab48f016502fb3e6825529f5f59 165 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 52 62 - T 05-07-2017 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS05380 8b4ccab48f016502fb3e6825529f5f59 165 Gene3D G3DSA:2.60.40.200 13 156 2.6E-50 T 05-07-2017 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS05380 8b4ccab48f016502fb3e6825529f5f59 165 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 144 155 - T 05-07-2017 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AC028_RS17550 e4866dfaae85376f1b9f591abcb0dcb0 790 SUPERFAMILY SSF48208 288 768 1.45E-84 T 05-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AC028_RS17550 e4866dfaae85376f1b9f591abcb0dcb0 790 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 47 281 1.6E-71 T 05-07-2017 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 AC028_RS17550 e4866dfaae85376f1b9f591abcb0dcb0 790 PIRSF PIRSF007663 18 790 3.6E-301 T 05-07-2017 IPR016518 Alpha-L-fucosidase GO:0004560 KEGG: 00511+3.2.1.51 AC028_RS17550 e4866dfaae85376f1b9f591abcb0dcb0 790 Gene3D G3DSA:2.70.98.50 46 417 1.2E-138 T 05-07-2017 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 AC028_RS19700 cb57ab490f8da86922622ca382432684 106 Pfam PF06844 Protein of unknown function (DUF1244) 34 99 1.1E-36 T 05-07-2017 IPR023163 SMc04008-like domain AC028_RS19700 cb57ab490f8da86922622ca382432684 106 Gene3D G3DSA:1.10.3340.10 6 91 2.3E-41 T 05-07-2017 IPR023163 SMc04008-like domain AC028_RS19700 cb57ab490f8da86922622ca382432684 106 SUPERFAMILY SSF158757 9 84 1.96E-34 T 05-07-2017 IPR023163 SMc04008-like domain AC028_RS10190 6e9bd8c2852a69fe7742fa269746fded 270 Gene3D G3DSA:2.30.42.10 214 267 1.8E-11 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS10190 6e9bd8c2852a69fe7742fa269746fded 270 Pfam PF13180 PDZ domain 215 267 3.5E-8 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS10190 6e9bd8c2852a69fe7742fa269746fded 270 Pfam PF11356 Type II secretion system protein C 82 141 5.4E-8 T 05-07-2017 IPR024961 Type II secretion system protein C, N-terminal AC028_RS10190 6e9bd8c2852a69fe7742fa269746fded 270 SUPERFAMILY SSF50156 201 266 8.54E-12 T 05-07-2017 IPR001478 PDZ domain GO:0005515 AC028_RS12620 8b571c7e2e3bac3d163d43704593996b 569 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 230 536 4.6E-31 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS12620 8b571c7e2e3bac3d163d43704593996b 569 Gene3D G3DSA:3.50.50.60 227 339 6.0E-26 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS12620 8b571c7e2e3bac3d163d43704593996b 569 SUPERFAMILY SSF51206 8 138 4.06E-15 T 05-07-2017 IPR018490 Cyclic nucleotide-binding-like AC028_RS12620 8b571c7e2e3bac3d163d43704593996b 569 Gene3D G3DSA:2.60.120.10 7 132 4.1E-9 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS12620 8b571c7e2e3bac3d163d43704593996b 569 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 372 396 7.3E-30 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS12620 8b571c7e2e3bac3d163d43704593996b 569 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 334 342 7.3E-30 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS12620 8b571c7e2e3bac3d163d43704593996b 569 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 231 253 7.3E-30 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS12620 8b571c7e2e3bac3d163d43704593996b 569 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 264 279 7.3E-30 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS12620 8b571c7e2e3bac3d163d43704593996b 569 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 426 442 7.3E-30 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS12620 8b571c7e2e3bac3d163d43704593996b 569 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 510 528 7.3E-30 T 05-07-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AC028_RS12620 8b571c7e2e3bac3d163d43704593996b 569 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 464 480 3.6E-22 T 05-07-2017 AC028_RS12620 8b571c7e2e3bac3d163d43704593996b 569 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 251 3.6E-22 T 05-07-2017 AC028_RS12620 8b571c7e2e3bac3d163d43704593996b 569 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 500 522 3.6E-22 T 05-07-2017 AC028_RS12620 8b571c7e2e3bac3d163d43704593996b 569 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 333 351 3.6E-22 T 05-07-2017 AC028_RS12620 8b571c7e2e3bac3d163d43704593996b 569 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 376 394 3.6E-22 T 05-07-2017 AC028_RS12620 8b571c7e2e3bac3d163d43704593996b 569 SUPERFAMILY SSF51905 220 547 1.89E-45 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS12620 8b571c7e2e3bac3d163d43704593996b 569 Gene3D G3DSA:3.50.50.60 340 545 2.4E-29 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS12620 8b571c7e2e3bac3d163d43704593996b 569 Pfam PF00027 Cyclic nucleotide-binding domain 32 117 2.2E-8 T 05-07-2017 IPR000595 Cyclic nucleotide-binding domain AC028_RS06865 130ea6e50aa057a8d1f8b1d96459e77a 351 PRINTS PR01805 VacJ lipoprotein signature 121 134 1.5E-22 T 05-07-2017 IPR007428 MlaA lipoprotein GO:0016020 AC028_RS06865 130ea6e50aa057a8d1f8b1d96459e77a 351 PRINTS PR01805 VacJ lipoprotein signature 189 206 1.5E-22 T 05-07-2017 IPR007428 MlaA lipoprotein GO:0016020 AC028_RS06865 130ea6e50aa057a8d1f8b1d96459e77a 351 PRINTS PR01805 VacJ lipoprotein signature 138 154 1.5E-22 T 05-07-2017 IPR007428 MlaA lipoprotein GO:0016020 AC028_RS06865 130ea6e50aa057a8d1f8b1d96459e77a 351 PRINTS PR01805 VacJ lipoprotein signature 225 242 1.5E-22 T 05-07-2017 IPR007428 MlaA lipoprotein GO:0016020 AC028_RS06865 130ea6e50aa057a8d1f8b1d96459e77a 351 Pfam PF04333 MlaA lipoprotein 120 311 4.9E-71 T 05-07-2017 IPR007428 MlaA lipoprotein GO:0016020 AC028_RS09600 3816d852f3f122bf3654438c73ec7721 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 124 1.7E-9 T 05-07-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AC028_RS09600 3816d852f3f122bf3654438c73ec7721 131 Gene3D G3DSA:3.10.180.10 1 130 2.4E-23 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS09600 3816d852f3f122bf3654438c73ec7721 131 SUPERFAMILY SSF54593 2 130 7.56E-24 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS18595 290e2461ece0798819314d13b0bd485a 401 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 4.9E-22 T 05-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AC028_RS18595 290e2461ece0798819314d13b0bd485a 401 Pfam PF00700 Bacterial flagellin C-terminal helical region 318 398 4.5E-5 T 05-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AC028_RS18595 290e2461ece0798819314d13b0bd485a 401 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 400 2.6E-109 T 05-07-2017 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 AC028_RS18595 290e2461ece0798819314d13b0bd485a 401 Gene3D G3DSA:1.20.1330.10 305 357 5.1E-22 T 05-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AC028_RS18595 290e2461ece0798819314d13b0bd485a 401 Gene3D G3DSA:1.20.1330.10 59 169 5.1E-22 T 05-07-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AC028_RS18595 290e2461ece0798819314d13b0bd485a 401 SUPERFAMILY SSF64518 1 401 5.62E-77 T 05-07-2017 AC028_RS05660 c50cf92848345597475e40ecd9d38afd 419 Pfam PF00999 Sodium/hydrogen exchanger family 13 400 7.8E-53 T 05-07-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AC028_RS15650 fec6594a617fcc8f4d9dad75624df471 259 Gene3D G3DSA:2.40.30.10 8 98 4.0E-31 T 05-07-2017 AC028_RS15650 fec6594a617fcc8f4d9dad75624df471 259 Pfam PF00970 Oxidoreductase FAD-binding domain 19 99 8.0E-7 T 05-07-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AC028_RS15650 fec6594a617fcc8f4d9dad75624df471 259 Pfam PF00175 Oxidoreductase NAD-binding domain 113 229 1.8E-7 T 05-07-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AC028_RS15650 fec6594a617fcc8f4d9dad75624df471 259 Gene3D G3DSA:3.40.50.80 99 258 1.5E-44 T 05-07-2017 AC028_RS15650 fec6594a617fcc8f4d9dad75624df471 259 SUPERFAMILY SSF52343 104 257 1.02E-39 T 05-07-2017 AC028_RS15650 fec6594a617fcc8f4d9dad75624df471 259 SUPERFAMILY SSF63380 8 100 8.6E-25 T 05-07-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AC028_RS03565 890a83087660133b17300371c3b3fc1d 90 PIRSF PIRSF017854 5 90 2.5E-35 T 05-07-2017 IPR016704 Conjugal transfer, TrbD AC028_RS03565 890a83087660133b17300371c3b3fc1d 90 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 15 86 6.0E-5 T 05-07-2017 AC028_RS03565 890a83087660133b17300371c3b3fc1d 90 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 12 83 5.2E-11 T 05-07-2017 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 SMART SM00138 223 484 4.6E-78 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 PRINTS PR00996 Glutamate methyltransferase family signature 245 258 4.8E-26 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 PRINTS PR00996 Glutamate methyltransferase family signature 358 374 4.8E-26 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 PRINTS PR00996 Glutamate methyltransferase family signature 424 438 4.8E-26 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 PRINTS PR00996 Glutamate methyltransferase family signature 282 294 4.8E-26 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 PRINTS PR00996 Glutamate methyltransferase family signature 443 466 4.8E-26 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 PRINTS PR00996 Glutamate methyltransferase family signature 322 342 4.8E-26 T 05-07-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 Gene3D G3DSA:3.40.50.180 15 206 6.9E-26 T 05-07-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 Pfam PF07536 HWE histidine kinase 963 1046 4.2E-21 T 05-07-2017 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 SUPERFAMILY SSF55785 701 822 2.9E-6 T 05-07-2017 IPR000014 PAS domain AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 Gene3D G3DSA:3.30.450.20 833 945 5.9E-23 T 05-07-2017 AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 Gene3D G3DSA:3.40.50.150 288 483 4.5E-64 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 Pfam PF13596 PAS domain 716 822 5.0E-21 T 05-07-2017 AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 Pfam PF03705 CheR methyltransferase, all-alpha domain 226 274 7.1E-13 T 05-07-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 SUPERFAMILY SSF52738 18 208 1.1E-21 T 05-07-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 Pfam PF01339 CheB methylesterase 24 199 7.1E-17 T 05-07-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 Gene3D G3DSA:1.10.155.10 225 286 7.4E-12 T 05-07-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 Pfam PF08447 PAS fold 859 943 7.7E-15 T 05-07-2017 IPR013655 PAS fold-3 GO:0005515 AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 Gene3D G3DSA:3.30.450.20 716 832 6.1E-7 T 05-07-2017 AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 Pfam PF01739 CheR methyltransferase, SAM binding domain 290 477 2.0E-52 T 05-07-2017 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 SMART SM00091 523 588 49.0 T 05-07-2017 IPR000014 PAS domain AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 SMART SM00091 714 782 2.0 T 05-07-2017 IPR000014 PAS domain AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 SMART SM00091 836 903 0.0032 T 05-07-2017 IPR000014 PAS domain AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 SUPERFAMILY SSF53335 289 482 6.66E-49 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 SMART SM00911 963 1046 1.2E-29 T 05-07-2017 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 SUPERFAMILY SSF55785 820 944 2.44E-16 T 05-07-2017 IPR000014 PAS domain AC028_RS14415 2c1c06b03ff0cf6aa1a6dbf3b04df83c 1159 SUPERFAMILY SSF47757 224 291 2.48E-12 T 05-07-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AC028_RS22205 6b83d54699fa3d286f91f12fc5f4fe81 270 Gene3D G3DSA:3.90.70.10 49 256 3.9E-31 T 05-07-2017 AC028_RS22205 6b83d54699fa3d286f91f12fc5f4fe81 270 Pfam PF00112 Papain family cysteine protease 54 256 2.2E-15 T 05-07-2017 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 AC028_RS22205 6b83d54699fa3d286f91f12fc5f4fe81 270 SMART SM00645 53 267 4.3E-6 T 05-07-2017 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 AC028_RS22205 6b83d54699fa3d286f91f12fc5f4fe81 270 SUPERFAMILY SSF54001 42 258 1.51E-37 T 05-07-2017 AC028_RS19790 01159df931b287dddf075386b11a414b 1055 Pfam PF06202 Amylo-alpha-1,6-glucosidase 611 711 9.1E-5 T 05-07-2017 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25+3.2.1.33|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AC028_RS19790 01159df931b287dddf075386b11a414b 1055 SUPERFAMILY SSF48208 559 987 3.4E-46 T 05-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AC028_RS19790 01159df931b287dddf075386b11a414b 1055 Gene3D G3DSA:2.60.120.260 27 179 1.0E-6 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS19790 01159df931b287dddf075386b11a414b 1055 Gene3D G3DSA:2.60.120.260 204 305 5.6E-18 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS19790 01159df931b287dddf075386b11a414b 1055 SUPERFAMILY SSF49785 187 297 8.51E-15 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS19790 01159df931b287dddf075386b11a414b 1055 SUPERFAMILY SSF49785 26 180 3.4E-20 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS19790 01159df931b287dddf075386b11a414b 1055 Gene3D G3DSA:1.50.10.10 619 716 3.3E-8 T 05-07-2017 IPR012341 Six-hairpin glycosidase GO:0003824 AC028_RS19790 01159df931b287dddf075386b11a414b 1055 Pfam PF00754 F5/8 type C domain 193 301 7.2E-15 T 05-07-2017 IPR000421 Coagulation factor 5/8 C-terminal domain AC028_RS12225 88a145a8485f70c5b8cdddf28e9635a6 177 Pfam PF03843 Outer membrane lipoprotein Slp family 15 162 1.0E-44 T 05-07-2017 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AC028_RS12225 88a145a8485f70c5b8cdddf28e9635a6 177 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 12 176 1.3E-27 T 05-07-2017 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AC028_RS12225 88a145a8485f70c5b8cdddf28e9635a6 177 PIRSF PIRSF004982 1 177 2.9E-51 T 05-07-2017 IPR004658 Outer membrane lipoprotein Slp GO:0019867 AC028_RS04225 dbcd885d0f4a8c936c6a4faebbf47f09 180 Pfam PF01292 Prokaryotic cytochrome b561 7 175 1.2E-29 T 05-07-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AC028_RS04225 dbcd885d0f4a8c936c6a4faebbf47f09 180 Gene3D G3DSA:1.20.950.20 5 67 5.3E-5 T 05-07-2017 AC028_RS04225 dbcd885d0f4a8c936c6a4faebbf47f09 180 Gene3D G3DSA:1.20.950.20 88 177 2.5E-5 T 05-07-2017 AC028_RS04225 dbcd885d0f4a8c936c6a4faebbf47f09 180 SUPERFAMILY SSF81342 2 178 9.42E-37 T 05-07-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AC028_RS17225 af15bcb3c4a269733a5eec4dd1413a38 375 Pfam PF01384 Phosphate transporter family 19 172 1.4E-34 T 05-07-2017 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AC028_RS17225 af15bcb3c4a269733a5eec4dd1413a38 375 Pfam PF01384 Phosphate transporter family 191 361 9.4E-46 T 05-07-2017 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AC028_RS16580 14d988b5aff9f288dce6142328122951 260 SUPERFAMILY SSF52096 2 260 8.89E-88 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS16580 14d988b5aff9f288dce6142328122951 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 259 7.8E-66 T 05-07-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AC028_RS16580 14d988b5aff9f288dce6142328122951 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 05-07-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AC028_RS16580 14d988b5aff9f288dce6142328122951 260 Gene3D G3DSA:3.90.226.10 3 200 2.6E-74 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS16580 14d988b5aff9f288dce6142328122951 260 Gene3D G3DSA:1.10.12.10 203 260 2.9E-16 T 05-07-2017 IPR014748 Crontonase, C-terminal AC028_RS14355 61b7ee12f0af680e5405cbcfe606b008 394 SUPERFAMILY SSF53756 83 388 4.92E-16 T 05-07-2017 AC028_RS14355 61b7ee12f0af680e5405cbcfe606b008 394 Pfam PF13692 Glycosyl transferases group 1 240 359 3.6E-8 T 05-07-2017 AC028_RS14365 1bd1770b755f3a83f2ded15fc81cae2b 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 213 7.9E-37 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS14365 1bd1770b755f3a83f2ded15fc81cae2b 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 232 7.9E-37 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS14365 1bd1770b755f3a83f2ded15fc81cae2b 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 249 269 7.9E-37 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS14365 1bd1770b755f3a83f2ded15fc81cae2b 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 133 7.9E-37 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS14365 1bd1770b755f3a83f2ded15fc81cae2b 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 184 7.9E-37 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS14365 1bd1770b755f3a83f2ded15fc81cae2b 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 46 63 7.9E-37 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS14365 1bd1770b755f3a83f2ded15fc81cae2b 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 133 4.9E-10 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS14365 1bd1770b755f3a83f2ded15fc81cae2b 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 182 4.9E-10 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS14365 1bd1770b755f3a83f2ded15fc81cae2b 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 194 213 4.9E-10 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS14365 1bd1770b755f3a83f2ded15fc81cae2b 288 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 54 284 1.9E-58 T 05-07-2017 AC028_RS14365 1bd1770b755f3a83f2ded15fc81cae2b 288 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 181 209 - T 05-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AC028_RS14365 1bd1770b755f3a83f2ded15fc81cae2b 288 Gene3D G3DSA:3.40.50.720 40 285 1.6E-77 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS14365 1bd1770b755f3a83f2ded15fc81cae2b 288 SUPERFAMILY SSF51735 43 285 3.74E-77 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS04115 f5660302b2faa595bfb9b24b2a9231b6 289 Pfam PF00326 Prolyl oligopeptidase family 51 239 2.7E-11 T 05-07-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AC028_RS04115 f5660302b2faa595bfb9b24b2a9231b6 289 Gene3D G3DSA:3.40.50.1820 13 240 4.9E-35 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS04115 f5660302b2faa595bfb9b24b2a9231b6 289 SUPERFAMILY SSF53474 7 238 9.73E-38 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS04115 f5660302b2faa595bfb9b24b2a9231b6 289 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 83 113 - T 05-07-2017 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 AC028_RS08660 3eb6532be94db5b94ffe3313af470159 125 Pfam PF12762 ISXO2-like transposase domain 2 90 7.8E-20 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS08660 3eb6532be94db5b94ffe3313af470159 125 SMART SM01126 1 90 9.3E-9 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS08120 ed8153ad12d4a3d2148802208500fc36 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.7E-29 T 05-07-2017 IPR000390 Small multidrug resistance protein family GO:0016021 AC028_RS08120 ed8153ad12d4a3d2148802208500fc36 104 SUPERFAMILY SSF103481 4 102 5.23E-20 T 05-07-2017 AC028_RS15150 c37567ba4fd8d8505259467a10fd7d31 117 Gene3D G3DSA:3.30.420.10 15 101 9.6E-23 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS15150 c37567ba4fd8d8505259467a10fd7d31 117 Pfam PF13683 Integrase core domain 35 100 9.7E-28 T 05-07-2017 IPR001584 Integrase, catalytic core GO:0015074 AC028_RS15150 c37567ba4fd8d8505259467a10fd7d31 117 SUPERFAMILY SSF53098 15 107 1.77E-24 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS16665 8d703c00d49ca6cb042b728dac67aac1 455 SUPERFAMILY SSF51905 283 388 9.07E-52 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS16665 8d703c00d49ca6cb042b728dac67aac1 455 SUPERFAMILY SSF51905 12 179 9.07E-52 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS16665 8d703c00d49ca6cb042b728dac67aac1 455 Pfam PF01494 FAD binding domain 11 334 2.0E-23 T 05-07-2017 IPR002938 FAD-binding domain GO:0071949 AC028_RS16665 8d703c00d49ca6cb042b728dac67aac1 455 Gene3D G3DSA:3.50.50.60 12 184 3.6E-34 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS16665 8d703c00d49ca6cb042b728dac67aac1 455 Gene3D G3DSA:3.50.50.60 284 363 3.6E-34 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS16665 8d703c00d49ca6cb042b728dac67aac1 455 Hamap MF_01971 Kynurenine 3-monooxygenase [kmo]. 6 445 27.465 T 05-07-2017 IPR027545 Kynurenine 3-monooxygenase GO:0004502|GO:0006569|GO:0019805 KEGG: 00380+1.14.13.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|Reactome: R-HSA-71240 AC028_RS16665 8d703c00d49ca6cb042b728dac67aac1 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 312 328 1.0E-17 T 05-07-2017 AC028_RS16665 8d703c00d49ca6cb042b728dac67aac1 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 1.0E-17 T 05-07-2017 AC028_RS16665 8d703c00d49ca6cb042b728dac67aac1 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 312 1.0E-17 T 05-07-2017 AC028_RS16665 8d703c00d49ca6cb042b728dac67aac1 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 1.0E-17 T 05-07-2017 AC028_RS19550 03d4e0b4abf43f6697b6490443e9ed70 369 Pfam PF04324 BFD-like [2Fe-2S] binding domain 331 369 1.5E-6 T 05-07-2017 IPR007419 BFD-like [2Fe-2S]-binding domain AC028_RS19550 03d4e0b4abf43f6697b6490443e9ed70 369 Pfam PF01568 Molydopterin dinucleotide binding domain 61 170 1.4E-27 T 05-07-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AC028_RS19550 03d4e0b4abf43f6697b6490443e9ed70 369 Gene3D G3DSA:2.40.40.20 11 176 1.2E-47 T 05-07-2017 AC028_RS19550 03d4e0b4abf43f6697b6490443e9ed70 369 SUPERFAMILY SSF50692 27 176 7.46E-40 T 05-07-2017 IPR009010 Aspartate decarboxylase-like domain AC028_RS10765 8a99377358142e7111e66da04608bc93 445 PRINTS PR00465 E-class P450 group IV signature 346 364 2.0E-21 T 05-07-2017 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AC028_RS10765 8a99377358142e7111e66da04608bc93 445 PRINTS PR00465 E-class P450 group IV signature 297 313 2.0E-21 T 05-07-2017 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AC028_RS10765 8a99377358142e7111e66da04608bc93 445 PRINTS PR00465 E-class P450 group IV signature 387 405 2.0E-21 T 05-07-2017 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AC028_RS10765 8a99377358142e7111e66da04608bc93 445 PRINTS PR00465 E-class P450 group IV signature 371 387 2.0E-21 T 05-07-2017 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AC028_RS10765 8a99377358142e7111e66da04608bc93 445 PRINTS PR00465 E-class P450 group IV signature 31 54 2.0E-21 T 05-07-2017 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AC028_RS10765 8a99377358142e7111e66da04608bc93 445 PRINTS PR00465 E-class P450 group IV signature 330 344 2.0E-21 T 05-07-2017 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AC028_RS10765 8a99377358142e7111e66da04608bc93 445 PRINTS PR00465 E-class P450 group IV signature 242 268 2.0E-21 T 05-07-2017 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AC028_RS10765 8a99377358142e7111e66da04608bc93 445 Pfam PF00067 Cytochrome P450 10 428 2.2E-60 T 05-07-2017 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AC028_RS10765 8a99377358142e7111e66da04608bc93 445 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 380 389 - T 05-07-2017 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 AC028_RS10765 8a99377358142e7111e66da04608bc93 445 PRINTS PR00385 P450 superfamily signature 302 313 5.6E-10 T 05-07-2017 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AC028_RS10765 8a99377358142e7111e66da04608bc93 445 PRINTS PR00385 P450 superfamily signature 251 268 5.6E-10 T 05-07-2017 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AC028_RS10765 8a99377358142e7111e66da04608bc93 445 PRINTS PR00385 P450 superfamily signature 378 387 5.6E-10 T 05-07-2017 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AC028_RS10765 8a99377358142e7111e66da04608bc93 445 PRINTS PR00385 P450 superfamily signature 387 398 5.6E-10 T 05-07-2017 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AC028_RS10765 8a99377358142e7111e66da04608bc93 445 Gene3D G3DSA:1.10.630.10 5 438 6.3E-87 T 05-07-2017 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AC028_RS10765 8a99377358142e7111e66da04608bc93 445 SUPERFAMILY SSF48264 6 438 4.98E-81 T 05-07-2017 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AC028_RS18920 811b81d9ec88efab1387251bfb701da9 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 1.2E-10 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS18920 811b81d9ec88efab1387251bfb701da9 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 1.2E-10 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS18920 811b81d9ec88efab1387251bfb701da9 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 217 231 1.2E-10 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS18920 811b81d9ec88efab1387251bfb701da9 274 Pfam PF00561 alpha/beta hydrolase fold 23 254 1.4E-24 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS18920 811b81d9ec88efab1387251bfb701da9 274 Gene3D G3DSA:3.40.50.1820 6 271 2.5E-70 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS18920 811b81d9ec88efab1387251bfb701da9 274 SUPERFAMILY SSF53474 4 271 9.54E-65 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS07265 6180f57fce8db821fce5cd066a61a96e 234 SUPERFAMILY SSF52096 17 207 8.88E-19 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS07265 6180f57fce8db821fce5cd066a61a96e 234 Gene3D G3DSA:3.90.226.10 19 188 2.9E-16 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS07265 6180f57fce8db821fce5cd066a61a96e 234 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 6 229 2.5E-89 T 05-07-2017 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal GO:0016874 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS07265 6180f57fce8db821fce5cd066a61a96e 234 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 3 231 8.5E-81 T 05-07-2017 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 AC028_RS22315 3f752790b7d0cdf5d00455dc96d9be97 320 Gene3D G3DSA:1.10.10.60 160 199 4.5E-4 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS22315 3f752790b7d0cdf5d00455dc96d9be97 320 SMART SM00857 5 160 3.4E-36 T 05-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AC028_RS22315 3f752790b7d0cdf5d00455dc96d9be97 320 Gene3D G3DSA:3.40.50.1390 6 142 1.3E-26 T 05-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AC028_RS22315 3f752790b7d0cdf5d00455dc96d9be97 320 Pfam PF00239 Resolvase, N terminal domain 6 160 9.2E-32 T 05-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AC028_RS22315 3f752790b7d0cdf5d00455dc96d9be97 320 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 05-07-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AC028_RS22315 3f752790b7d0cdf5d00455dc96d9be97 320 SUPERFAMILY SSF53041 5 160 5.1E-28 T 05-07-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AC028_RS05575 e70a6904961c2a74fc42f5e2dc6b11b2 214 Pfam PF02036 SCP-2 sterol transfer family 21 121 3.0E-16 T 05-07-2017 IPR003033 SCP2 sterol-binding domain AC028_RS03445 ff66e726542a8d8835a855933d22b45c 256 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 128 249 7.0E-33 T 05-07-2017 IPR018754 Protein of unknown function DUF2285 AC028_RS06885 7044570527e5575cbbb6bbc391e71aa3 526 Pfam PF02646 RmuC family 214 502 5.3E-76 T 05-07-2017 IPR003798 DNA recombination RmuC AC028_RS01490 6168650abe1154250cfd40fe53121e40 715 Pfam PF05506 Domain of unknown function (DUF756) 615 684 4.3E-11 T 05-07-2017 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 AC028_RS01490 6168650abe1154250cfd40fe53121e40 715 Pfam PF05506 Domain of unknown function (DUF756) 513 597 4.1E-16 T 05-07-2017 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 AC028_RS01490 6168650abe1154250cfd40fe53121e40 715 Pfam PF04185 Phosphoesterase family 44 443 2.1E-113 T 05-07-2017 IPR007312 Phosphoesterase GO:0016788 AC028_RS01490 6168650abe1154250cfd40fe53121e40 715 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 6 698 2.4E-258 T 05-07-2017 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 AC028_RS16230 c09e2b4e8f1e4470c26f567bc9ac712a 361 SUPERFAMILY SSF111369 66 214 5.23E-10 T 05-07-2017 AC028_RS16230 c09e2b4e8f1e4470c26f567bc9ac712a 361 Gene3D G3DSA:2.40.50.100 61 96 6.4E-13 T 05-07-2017 AC028_RS16230 c09e2b4e8f1e4470c26f567bc9ac712a 361 Gene3D G3DSA:2.40.50.100 177 214 6.4E-13 T 05-07-2017 AC028_RS16230 c09e2b4e8f1e4470c26f567bc9ac712a 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 255 1.5E-10 T 05-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_RS01475 5e5b3326dc82f116e6c75c524e239a50 97 SMART SM00834 1 42 7.9E-17 T 05-07-2017 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AC028_RS01475 5e5b3326dc82f116e6c75c524e239a50 97 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 3.0E-21 T 05-07-2017 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AC028_RS01475 5e5b3326dc82f116e6c75c524e239a50 97 Pfam PF09723 Zinc ribbon domain 1 41 3.7E-15 T 05-07-2017 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain AC028_RS16120 ac49f3be72482ebe12101416940dea13 406 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 307 331 1.1E-11 T 05-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AC028_RS16120 ac49f3be72482ebe12101416940dea13 406 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 78 98 1.1E-11 T 05-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AC028_RS16120 ac49f3be72482ebe12101416940dea13 406 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 384 399 1.1E-11 T 05-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AC028_RS16120 ac49f3be72482ebe12101416940dea13 406 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 274 295 1.1E-11 T 05-07-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AC028_RS16120 ac49f3be72482ebe12101416940dea13 406 Gene3D G3DSA:2.40.50.100 255 291 1.1E-11 T 05-07-2017 AC028_RS16120 ac49f3be72482ebe12101416940dea13 406 Gene3D G3DSA:2.40.50.100 63 98 1.1E-11 T 05-07-2017 AC028_RS16120 ac49f3be72482ebe12101416940dea13 406 Pfam PF13437 HlyD family secretion protein 262 387 6.8E-13 T 05-07-2017 AC028_RS21655 77381999af424f9ab036127d08a4c8d7 148 PIRSF PIRSF002030 14 142 1.6E-44 T 05-07-2017 IPR016339 Truncated hemoglobin, group 1 AC028_RS21655 77381999af424f9ab036127d08a4c8d7 148 Gene3D G3DSA:1.10.490.10 18 142 1.7E-33 T 05-07-2017 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AC028_RS21655 77381999af424f9ab036127d08a4c8d7 148 Pfam PF01152 Bacterial-like globin 27 139 4.7E-12 T 05-07-2017 IPR001486 Truncated hemoglobin GO:0019825 AC028_RS21655 77381999af424f9ab036127d08a4c8d7 148 SUPERFAMILY SSF46458 19 140 1.18E-29 T 05-07-2017 IPR009050 Globin-like AC028_RS19680 f04bd04d2f8d1bba8021d0987d4b7722 418 Gene3D G3DSA:1.10.150.130 97 193 9.8E-13 T 05-07-2017 IPR023109 Integrase/recombinase, N-terminal AC028_RS19680 f04bd04d2f8d1bba8021d0987d4b7722 418 Pfam PF00589 Phage integrase family 213 375 6.6E-22 T 05-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AC028_RS19680 f04bd04d2f8d1bba8021d0987d4b7722 418 Gene3D G3DSA:1.10.443.10 202 382 6.7E-28 T 05-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AC028_RS19680 f04bd04d2f8d1bba8021d0987d4b7722 418 Pfam PF13356 Domain of unknown function (DUF4102) 2 89 3.7E-13 T 05-07-2017 IPR025166 Domain of unknown function DUF4102 AC028_RS19680 f04bd04d2f8d1bba8021d0987d4b7722 418 SUPERFAMILY SSF56349 98 385 2.35E-56 T 05-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AC028_RS09870 3dcc2cc8f4ad33c9f6d1a3c22a5c0bad 132 Pfam PF04304 Protein of unknown function (DUF454) 8 122 1.2E-34 T 05-07-2017 IPR007401 Protein of unknown function DUF454 AC028_RS09870 3dcc2cc8f4ad33c9f6d1a3c22a5c0bad 132 PIRSF PIRSF016789 7 127 6.3E-31 T 05-07-2017 IPR007401 Protein of unknown function DUF454 AC028_RS03590 2e157c783e1192fcd80f2ffb5c2962a6 234 Pfam PF04335 VirB8 protein 23 225 3.3E-69 T 05-07-2017 IPR007430 Bacterial virulence protein VirB8 GO:0016020 AC028_RS03590 2e157c783e1192fcd80f2ffb5c2962a6 234 SUPERFAMILY SSF54427 94 226 2.06E-28 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS17050 7f575fa871b54d5c407188f7f2a1f3c7 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 5 51 1.0E-18 T 05-07-2017 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AC028_RS17050 7f575fa871b54d5c407188f7f2a1f3c7 68 Pfam PF04995 Heme exporter protein D (CcmD) 8 51 3.6E-15 T 05-07-2017 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AC028_RS16905 39b446034e14b3d1446bdc4653df6cd8 185 TIGRFAM TIGR01837 PHA_granule_1: poly(hydroxyalkanoate) granule-associated protein 28 144 9.6E-49 T 05-07-2017 IPR008769 Poly granule associated AC028_RS16905 39b446034e14b3d1446bdc4653df6cd8 185 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 20 142 3.2E-40 T 05-07-2017 IPR008769 Poly granule associated AC028_RS15765 6a54b7ec1d86d723afc57db6af9c28a3 344 Gene3D G3DSA:3.40.190.10 95 191 4.0E-23 T 05-07-2017 AC028_RS15765 6a54b7ec1d86d723afc57db6af9c28a3 344 Pfam PF03466 LysR substrate binding domain 89 296 5.5E-39 T 05-07-2017 IPR005119 LysR, substrate-binding AC028_RS15765 6a54b7ec1d86d723afc57db6af9c28a3 344 SUPERFAMILY SSF53850 89 298 3.26E-41 T 05-07-2017 AC028_RS15765 6a54b7ec1d86d723afc57db6af9c28a3 344 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.1E-17 T 05-07-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AC028_RS15765 6a54b7ec1d86d723afc57db6af9c28a3 344 SUPERFAMILY SSF46785 3 113 2.01E-21 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS15765 6a54b7ec1d86d723afc57db6af9c28a3 344 Gene3D G3DSA:1.10.10.10 4 89 1.0E-24 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS09575 6ce8eef38013dd50b8c497e034fb04ed 314 Pfam PF12833 Helix-turn-helix domain 232 309 6.9E-21 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS09575 6ce8eef38013dd50b8c497e034fb04ed 314 Gene3D G3DSA:1.10.10.60 208 262 1.2E-12 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS09575 6ce8eef38013dd50b8c497e034fb04ed 314 SUPERFAMILY SSF46689 209 260 2.82E-8 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS09575 6ce8eef38013dd50b8c497e034fb04ed 314 SMART SM00342 226 309 1.7E-27 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS09575 6ce8eef38013dd50b8c497e034fb04ed 314 Pfam PF12852 Cupin 17 193 1.0E-32 T 05-07-2017 IPR032783 AraC-type transcription regulator, ligand-binding domain AC028_RS09575 6ce8eef38013dd50b8c497e034fb04ed 314 SUPERFAMILY SSF46689 262 309 5.38E-11 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS09575 6ce8eef38013dd50b8c497e034fb04ed 314 Gene3D G3DSA:1.10.10.60 263 307 3.0E-13 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS02960 3180f97ea33448fbe741c476a66dbc24 164 SMART SM01126 1 129 5.1E-34 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS02960 3180f97ea33448fbe741c476a66dbc24 164 Pfam PF12762 ISXO2-like transposase domain 5 129 1.4E-25 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS10620 546f751850ca1419e84452842e8b5703 503 SUPERFAMILY SSF53244 324 432 3.43E-26 T 05-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AC028_RS10620 546f751850ca1419e84452842e8b5703 503 Gene3D G3DSA:3.40.1390.10 6 81 6.7E-21 T 05-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AC028_RS10620 546f751850ca1419e84452842e8b5703 503 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 430 8.2E-125 T 05-07-2017 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS10620 546f751850ca1419e84452842e8b5703 503 SUPERFAMILY SSF53623 102 321 1.24E-51 T 05-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AC028_RS10620 546f751850ca1419e84452842e8b5703 503 Pfam PF08245 Mur ligase middle domain 107 302 1.2E-43 T 05-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AC028_RS10620 546f751850ca1419e84452842e8b5703 503 Gene3D G3DSA:3.40.1190.10 84 319 8.8E-66 T 05-07-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AC028_RS10620 546f751850ca1419e84452842e8b5703 503 Gene3D G3DSA:3.90.190.20 322 433 7.0E-44 T 05-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AC028_RS10620 546f751850ca1419e84452842e8b5703 503 Gene3D G3DSA:3.90.190.20 469 494 7.0E-44 T 05-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AC028_RS10620 546f751850ca1419e84452842e8b5703 503 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 402 7.4E-10 T 05-07-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AC028_RS10620 546f751850ca1419e84452842e8b5703 503 Pfam PF01225 Mur ligase family, catalytic domain 24 93 2.2E-7 T 05-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AC028_RS10620 546f751850ca1419e84452842e8b5703 503 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 1 493 32.742 T 05-07-2017 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS10620 546f751850ca1419e84452842e8b5703 503 SUPERFAMILY SSF63418 2 94 7.85E-22 T 05-07-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AC028_RS21100 58e0717ef44a5d4933ae78f70f3fead3 312 Gene3D G3DSA:3.10.310.10 2 143 1.2E-52 T 05-07-2017 AC028_RS21100 58e0717ef44a5d4933ae78f70f3fead3 312 PIRSF PIRSF029792 1 312 4.5E-102 T 05-07-2017 IPR008794 Proline racemase family AC028_RS21100 58e0717ef44a5d4933ae78f70f3fead3 312 Gene3D G3DSA:3.10.310.10 144 300 1.2E-48 T 05-07-2017 AC028_RS21100 58e0717ef44a5d4933ae78f70f3fead3 312 SUPERFAMILY SSF54506 1 310 2.24E-93 T 05-07-2017 AC028_RS21100 58e0717ef44a5d4933ae78f70f3fead3 312 Pfam PF05544 Proline racemase 6 310 9.5E-108 T 05-07-2017 IPR008794 Proline racemase family AC028_RS08575 3796c62935d2351589d341c5de24c685 489 SUPERFAMILY SSF53098 293 473 1.16E-22 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS08575 3796c62935d2351589d341c5de24c685 489 Pfam PF13482 RNase_H superfamily 298 472 2.7E-39 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS08575 3796c62935d2351589d341c5de24c685 489 Gene3D G3DSA:3.30.420.10 298 475 6.4E-11 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS03220 c9f8ba69addaf95e8f0dff26ebc36c2d 579 SMART SM00382 329 450 7.5E-6 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS03220 c9f8ba69addaf95e8f0dff26ebc36c2d 579 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 396 410 - T 05-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AC028_RS03220 c9f8ba69addaf95e8f0dff26ebc36c2d 579 SUPERFAMILY SSF52540 186 576 2.92E-94 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS03220 c9f8ba69addaf95e8f0dff26ebc36c2d 579 Gene3D G3DSA:3.40.50.300 306 577 6.6E-92 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS03220 c9f8ba69addaf95e8f0dff26ebc36c2d 579 Gene3D G3DSA:3.30.450.90 171 301 3.0E-52 T 05-07-2017 AC028_RS03220 c9f8ba69addaf95e8f0dff26ebc36c2d 579 SUPERFAMILY SSF160246 18 161 3.66E-32 T 05-07-2017 AC028_RS03220 c9f8ba69addaf95e8f0dff26ebc36c2d 579 Pfam PF00437 Type II/IV secretion system protein 204 468 6.8E-84 T 05-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AC028_RS03220 c9f8ba69addaf95e8f0dff26ebc36c2d 579 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 96 576 6.1E-209 T 05-07-2017 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 AC028_RS03220 c9f8ba69addaf95e8f0dff26ebc36c2d 579 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 57 165 9.3E-14 T 05-07-2017 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 AC028_RS13785 da4bb1b76a12ce7741b8648f0aa491ce 455 SMART SM01150 13 410 1.9E-229 T 05-07-2017 IPR009770 Domain of unknown function DUF1338 AC028_RS13785 da4bb1b76a12ce7741b8648f0aa491ce 455 Gene3D G3DSA:3.10.180.10 197 248 8.9E-5 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS13785 da4bb1b76a12ce7741b8648f0aa491ce 455 Gene3D G3DSA:3.10.180.10 83 116 8.9E-5 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS13785 da4bb1b76a12ce7741b8648f0aa491ce 455 Pfam PF07063 Domain of unknown function (DUF1338) 11 410 4.6E-121 T 05-07-2017 IPR009770 Domain of unknown function DUF1338 AC028_RS02625 5df6a8facb5a94dd907fb46453c0c62f 99 Pfam PF05164 Cell division protein ZapA 7 91 4.0E-20 T 05-07-2017 IPR007838 Cell division protein ZapA-like AC028_RS02625 5df6a8facb5a94dd907fb46453c0c62f 99 SUPERFAMILY SSF102829 7 94 8.76E-24 T 05-07-2017 IPR007838 Cell division protein ZapA-like AC028_RS22180 5c96bdca33b9c6da71bc208435457c79 363 Pfam PF12275 Protein of unknown function (DUF3616) 24 358 8.5E-112 T 05-07-2017 IPR022060 Protein of unknown function DUF3616 AC028_RS08860 3124c4ad4ad530651fb228e1ec7c23b3 272 Pfam PF13709 Domain of unknown function (DUF4159) 73 270 1.4E-53 T 05-07-2017 IPR025297 Domain of unknown function DUF4159 AC028_RS14890 bd9c7c05eb1e288ca89e1a4c768dd88d 423 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 91 328 1.9E-12 T 05-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_RS14890 bd9c7c05eb1e288ca89e1a4c768dd88d 423 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 213 422 4.4E-30 T 05-07-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AC028_RS14890 bd9c7c05eb1e288ca89e1a4c768dd88d 423 Gene3D G3DSA:2.40.50.100 239 271 5.5E-8 T 05-07-2017 AC028_RS14890 bd9c7c05eb1e288ca89e1a4c768dd88d 423 Gene3D G3DSA:2.40.50.100 95 114 5.5E-8 T 05-07-2017 AC028_RS00125 68266eea239e8112fee1a9a90e0b2085 202 SUPERFAMILY SSF53448 6 190 7.43E-20 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS00125 68266eea239e8112fee1a9a90e0b2085 202 Pfam PF12804 MobA-like NTP transferase domain 7 167 1.5E-24 T 05-07-2017 IPR025877 MobA-like NTP transferase AC028_RS00125 68266eea239e8112fee1a9a90e0b2085 202 Gene3D G3DSA:3.90.550.10 5 195 3.5E-23 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS04930 34a705999a0d7ff6defab79024d01651 441 SUPERFAMILY SSF49879 29 107 2.3E-19 T 05-07-2017 IPR008984 SMAD/FHA domain GO:0005515 AC028_RS04930 34a705999a0d7ff6defab79024d01651 441 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 6 427 2.3E-121 T 05-07-2017 IPR017735 Type VI secretion system, FHA domain-containing protein AC028_RS04930 34a705999a0d7ff6defab79024d01651 441 Gene3D G3DSA:2.60.200.20 27 105 6.5E-18 T 05-07-2017 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AC028_RS04930 34a705999a0d7ff6defab79024d01651 441 Pfam PF00498 FHA domain 32 95 5.7E-15 T 05-07-2017 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AC028_RS04930 34a705999a0d7ff6defab79024d01651 441 SMART SM00240 30 79 3.5E-4 T 05-07-2017 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AC028_RS16545 a6ab59b9b1485c6637790d7d21750311 358 Gene3D G3DSA:3.40.190.10 44 187 3.0E-52 T 05-07-2017 AC028_RS16545 a6ab59b9b1485c6637790d7d21750311 358 PIRSF PIRSF002756 8 356 1.6E-107 T 05-07-2017 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 AC028_RS16545 a6ab59b9b1485c6637790d7d21750311 358 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 45 354 4.4E-125 T 05-07-2017 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 AC028_RS16545 a6ab59b9b1485c6637790d7d21750311 358 Pfam PF12849 PBP superfamily domain 41 326 3.9E-59 T 05-07-2017 IPR024370 PBP domain AC028_RS16545 a6ab59b9b1485c6637790d7d21750311 358 SUPERFAMILY SSF53850 45 354 3.74E-94 T 05-07-2017 AC028_RS16545 a6ab59b9b1485c6637790d7d21750311 358 Gene3D G3DSA:3.40.190.10 198 353 7.8E-31 T 05-07-2017 AC028_RS12880 9097f7bb0dcfedc2adff8da503a73d28 398 SUPERFAMILY SSF55874 276 383 7.86E-14 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS12880 9097f7bb0dcfedc2adff8da503a73d28 398 Pfam PF07730 Histidine kinase 199 261 4.1E-15 T 05-07-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AC028_RS12880 9097f7bb0dcfedc2adff8da503a73d28 398 Gene3D G3DSA:3.30.565.10 271 383 9.2E-7 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS02675 2de377b28529a2111148103b5babbe52 484 SUPERFAMILY SSF56935 5 106 1.07E-27 T 05-07-2017 AC028_RS02675 2de377b28529a2111148103b5babbe52 484 SUPERFAMILY SSF56935 238 282 1.07E-27 T 05-07-2017 AC028_RS02675 2de377b28529a2111148103b5babbe52 484 SUPERFAMILY SSF56935 321 364 1.07E-27 T 05-07-2017 AC028_RS02675 2de377b28529a2111148103b5babbe52 484 SUPERFAMILY SSF56935 398 484 1.07E-27 T 05-07-2017 AC028_RS02675 2de377b28529a2111148103b5babbe52 484 SUPERFAMILY SSF56935 133 182 1.07E-27 T 05-07-2017 AC028_RS02675 2de377b28529a2111148103b5babbe52 484 Gene3D G3DSA:2.40.170.20 329 484 4.9E-32 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02675 2de377b28529a2111148103b5babbe52 484 Gene3D G3DSA:2.40.170.20 6 294 4.9E-32 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS17195 717fc91a871961b1c0050b842e47b758 333 Gene3D G3DSA:3.20.20.30 3 322 9.4E-87 T 05-07-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AC028_RS17195 717fc91a871961b1c0050b842e47b758 333 Pfam PF00296 Luciferase-like monooxygenase 18 295 3.7E-33 T 05-07-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AC028_RS17195 717fc91a871961b1c0050b842e47b758 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 323 1.3E-134 T 05-07-2017 IPR019949 Luciferase family oxidoreductase, group 1 AC028_RS17195 717fc91a871961b1c0050b842e47b758 333 SUPERFAMILY SSF51679 4 322 1.57E-80 T 05-07-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AC028_RS16460 f85e4f4cd4e1c8fa400864b55e105000 43 SUPERFAMILY SSF47203 14 42 5.15E-7 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS16460 f85e4f4cd4e1c8fa400864b55e105000 43 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 14 38 4.8E-7 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS16460 f85e4f4cd4e1c8fa400864b55e105000 43 Gene3D G3DSA:1.20.140.10 14 42 3.2E-9 T 05-07-2017 AC028_RS16450 f85e4f4cd4e1c8fa400864b55e105000 43 SUPERFAMILY SSF47203 14 42 5.15E-7 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS16450 f85e4f4cd4e1c8fa400864b55e105000 43 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 14 38 4.8E-7 T 05-07-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AC028_RS16450 f85e4f4cd4e1c8fa400864b55e105000 43 Gene3D G3DSA:1.20.140.10 14 42 3.2E-9 T 05-07-2017 AC028_RS08160 33867e51bc6739a5d49a4fc893ebe1d8 156 Pfam PF00210 Ferritin-like domain 8 143 6.7E-40 T 05-07-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AC028_RS08160 33867e51bc6739a5d49a4fc893ebe1d8 156 PRINTS PR00601 Bacterioferritin signature 3 22 6.8E-69 T 05-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AC028_RS08160 33867e51bc6739a5d49a4fc893ebe1d8 156 PRINTS PR00601 Bacterioferritin signature 128 149 6.8E-69 T 05-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AC028_RS08160 33867e51bc6739a5d49a4fc893ebe1d8 156 PRINTS PR00601 Bacterioferritin signature 44 64 6.8E-69 T 05-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AC028_RS08160 33867e51bc6739a5d49a4fc893ebe1d8 156 PRINTS PR00601 Bacterioferritin signature 86 106 6.8E-69 T 05-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AC028_RS08160 33867e51bc6739a5d49a4fc893ebe1d8 156 PRINTS PR00601 Bacterioferritin signature 107 127 6.8E-69 T 05-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AC028_RS08160 33867e51bc6739a5d49a4fc893ebe1d8 156 PRINTS PR00601 Bacterioferritin signature 23 43 6.8E-69 T 05-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AC028_RS08160 33867e51bc6739a5d49a4fc893ebe1d8 156 PRINTS PR00601 Bacterioferritin signature 65 85 6.8E-69 T 05-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AC028_RS08160 33867e51bc6739a5d49a4fc893ebe1d8 156 Gene3D G3DSA:1.20.1260.10 1 155 1.1E-64 T 05-07-2017 IPR012347 Ferritin-related AC028_RS08160 33867e51bc6739a5d49a4fc893ebe1d8 156 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 05-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AC028_RS08160 33867e51bc6739a5d49a4fc893ebe1d8 156 PIRSF PIRSF002560 1 156 4.1E-71 T 05-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AC028_RS08160 33867e51bc6739a5d49a4fc893ebe1d8 156 SUPERFAMILY SSF47240 1 152 1.77E-54 T 05-07-2017 IPR009078 Ferritin-like superfamily AC028_RS08160 33867e51bc6739a5d49a4fc893ebe1d8 156 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 2.0E-73 T 05-07-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AC028_RS14035 01a747607f3c2fd421273c3a151961a3 274 Gene3D G3DSA:3.90.550.10 12 96 2.4E-11 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS14035 01a747607f3c2fd421273c3a151961a3 274 SUPERFAMILY SSF53448 6 156 4.06E-23 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS14035 01a747607f3c2fd421273c3a151961a3 274 Pfam PF00535 Glycosyl transferase family 2 15 132 1.0E-16 T 05-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AC028_RS09995 03d4598b834ca7313674be3c4c6edeb1 348 Pfam PF06723 MreB/Mbl protein 11 339 9.4E-152 T 05-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AC028_RS09995 03d4598b834ca7313674be3c4c6edeb1 348 Gene3D G3DSA:3.30.420.40 9 164 2.5E-46 T 05-07-2017 AC028_RS09995 03d4598b834ca7313674be3c4c6edeb1 348 Gene3D G3DSA:3.90.640.10 192 264 2.2E-30 T 05-07-2017 AC028_RS09995 03d4598b834ca7313674be3c4c6edeb1 348 SUPERFAMILY SSF53067 155 340 2.34E-48 T 05-07-2017 AC028_RS09995 03d4598b834ca7313674be3c4c6edeb1 348 Gene3D G3DSA:3.30.420.40 268 322 1.0E-34 T 05-07-2017 AC028_RS09995 03d4598b834ca7313674be3c4c6edeb1 348 Gene3D G3DSA:3.30.420.40 165 191 1.0E-34 T 05-07-2017 AC028_RS09995 03d4598b834ca7313674be3c4c6edeb1 348 SUPERFAMILY SSF53067 9 153 3.82E-38 T 05-07-2017 AC028_RS09995 03d4598b834ca7313674be3c4c6edeb1 348 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 2.9E-161 T 05-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AC028_RS09995 03d4598b834ca7313674be3c4c6edeb1 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 5.6E-62 T 05-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AC028_RS09995 03d4598b834ca7313674be3c4c6edeb1 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 5.6E-62 T 05-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AC028_RS09995 03d4598b834ca7313674be3c4c6edeb1 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 5.6E-62 T 05-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AC028_RS09995 03d4598b834ca7313674be3c4c6edeb1 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 5.6E-62 T 05-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AC028_RS09995 03d4598b834ca7313674be3c4c6edeb1 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 5.6E-62 T 05-07-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AC028_RS09995 03d4598b834ca7313674be3c4c6edeb1 348 SMART SM00268 10 345 0.0028 T 05-07-2017 IPR004000 Actin family AC028_RS01515 1ff90e6072001d24571a663011773bee 79 SUPERFAMILY SSF56601 36 79 1.32E-9 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS01515 1ff90e6072001d24571a663011773bee 79 Gene3D G3DSA:3.40.710.10 35 79 4.8E-12 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS01515 1ff90e6072001d24571a663011773bee 79 PRINTS PR00118 Beta-lactamase class A signature 39 63 2.9E-11 T 05-07-2017 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AC028_RS01515 1ff90e6072001d24571a663011773bee 79 PRINTS PR00118 Beta-lactamase class A signature 70 79 2.9E-11 T 05-07-2017 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AC028_RS01515 1ff90e6072001d24571a663011773bee 79 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 25 6.3E-5 T 05-07-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AC028_RS06110 6ad4f2e747e527ad559dbbfad348d1eb 143 Pfam PF01638 HxlR-like helix-turn-helix 31 115 1.2E-26 T 05-07-2017 IPR002577 Helix-turn-helix, HxlR type AC028_RS06110 6ad4f2e747e527ad559dbbfad348d1eb 143 Gene3D G3DSA:1.10.10.10 17 128 9.5E-42 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS06110 6ad4f2e747e527ad559dbbfad348d1eb 143 SUPERFAMILY SSF46785 18 128 1.21E-32 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS21990 af5d7dc1e7706a81b2c83d6eabce7b17 499 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 436 6.1E-153 T 05-07-2017 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AC028_RS21990 af5d7dc1e7706a81b2c83d6eabce7b17 499 SMART SM00316 37 130 4.5E-5 T 05-07-2017 IPR022967 RNA-binding domain, S1 AC028_RS21990 af5d7dc1e7706a81b2c83d6eabce7b17 499 SUPERFAMILY SSF50249 39 136 7.25E-16 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS21990 af5d7dc1e7706a81b2c83d6eabce7b17 499 Pfam PF10150 Ribonuclease E/G family 132 403 3.8E-102 T 05-07-2017 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AC028_RS21990 af5d7dc1e7706a81b2c83d6eabce7b17 499 Gene3D G3DSA:2.40.50.140 33 136 2.8E-30 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS08435 c032ea9cf9e0f03c19d74dc639f9e8ee 306 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 46 184 6.9E-20 T 05-07-2017 IPR013658 SMP-30/Gluconolactonase/LRE-like region AC028_RS08435 c032ea9cf9e0f03c19d74dc639f9e8ee 306 SUPERFAMILY SSF63829 18 185 2.22E-24 T 05-07-2017 AC028_RS08435 c032ea9cf9e0f03c19d74dc639f9e8ee 306 Gene3D G3DSA:2.120.10.30 34 200 1.4E-29 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS10960 7301765b133c4bd8d5cd1e4daadc7031 212 SUPERFAMILY SSF140478 26 179 3.53E-54 T 05-07-2017 IPR023353 LemA-like domain AC028_RS10960 7301765b133c4bd8d5cd1e4daadc7031 212 Pfam PF04011 LemA family 8 192 6.3E-67 T 05-07-2017 IPR007156 LemA AC028_RS10960 7301765b133c4bd8d5cd1e4daadc7031 212 Gene3D G3DSA:1.20.1440.20 17 192 3.2E-64 T 05-07-2017 IPR023353 LemA-like domain AC028_RS19020 24a53372d6f7b8d302d76560db9df597 123 SMART SM00448 4 112 0.0025 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS19020 24a53372d6f7b8d302d76560db9df597 123 SUPERFAMILY SSF52172 2 117 2.28E-17 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS19020 24a53372d6f7b8d302d76560db9df597 123 Pfam PF00072 Response regulator receiver domain 6 72 1.2E-4 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS19020 24a53372d6f7b8d302d76560db9df597 123 Gene3D G3DSA:3.40.50.2300 3 119 1.3E-13 T 05-07-2017 AC028_RS12755 900412be79c9031faf90d4d1c746c61a 405 SUPERFAMILY SSF50494 202 383 2.26E-13 T 05-07-2017 IPR009003 Peptidase S1, PA clan AC028_RS12755 900412be79c9031faf90d4d1c746c61a 405 Gene3D G3DSA:2.40.10.10 299 393 9.7E-11 T 05-07-2017 AC028_RS12755 900412be79c9031faf90d4d1c746c61a 405 Gene3D G3DSA:2.40.10.10 197 242 5.2E-8 T 05-07-2017 AC028_RS15980 040b53d79e3c45b51e3b0dc6c992065f 226 Pfam PF01965 DJ-1/PfpI family 25 221 1.1E-15 T 05-07-2017 IPR002818 DJ-1/PfpI AC028_RS15980 040b53d79e3c45b51e3b0dc6c992065f 226 Gene3D G3DSA:3.40.50.880 1 223 1.1E-90 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS15980 040b53d79e3c45b51e3b0dc6c992065f 226 SUPERFAMILY SSF52317 1 222 6.97E-77 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS10485 3b8cf88eb41e75d0e7b82de5db35b7d3 379 Gene3D G3DSA:3.90.870.10 1 211 4.8E-96 T 05-07-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain AC028_RS10485 3b8cf88eb41e75d0e7b82de5db35b7d3 379 PIRSF PIRSF001259 1 369 1.1E-114 T 05-07-2017 AC028_RS10485 3b8cf88eb41e75d0e7b82de5db35b7d3 379 SUPERFAMILY SSF55821 2 202 3.43E-82 T 05-07-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain AC028_RS10485 3b8cf88eb41e75d0e7b82de5db35b7d3 379 SUPERFAMILY SSF142695 204 363 1.83E-40 T 05-07-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AC028_RS10485 3b8cf88eb41e75d0e7b82de5db35b7d3 379 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 199 6.5E-68 T 05-07-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AC028_RS10485 3b8cf88eb41e75d0e7b82de5db35b7d3 379 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 37.552 T 05-07-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AC028_RS10485 3b8cf88eb41e75d0e7b82de5db35b7d3 379 Pfam PF00925 GTP cyclohydrolase II 207 362 4.3E-30 T 05-07-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AC028_RS10485 3b8cf88eb41e75d0e7b82de5db35b7d3 379 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 7.2E-81 T 05-07-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AC028_RS11640 1c3fee5cac0eccf6dd7e1da1d0119a02 216 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 6 214 39.155 T 05-07-2017 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11640 1c3fee5cac0eccf6dd7e1da1d0119a02 216 ProSitePatterns PS00474 Ribosomal protein L3 signature. 108 131 - T 05-07-2017 IPR019926 Ribosomal protein L3, conserved site AC028_RS11640 1c3fee5cac0eccf6dd7e1da1d0119a02 216 Pfam PF00297 Ribosomal protein L3 105 188 3.6E-15 T 05-07-2017 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11640 1c3fee5cac0eccf6dd7e1da1d0119a02 216 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 8 211 2.5E-85 T 05-07-2017 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11640 1c3fee5cac0eccf6dd7e1da1d0119a02 216 Gene3D G3DSA:4.10.960.10 82 164 1.9E-33 T 05-07-2017 AC028_RS11640 1c3fee5cac0eccf6dd7e1da1d0119a02 216 Gene3D G3DSA:2.40.30.10 8 37 1.0E-8 T 05-07-2017 AC028_RS11640 1c3fee5cac0eccf6dd7e1da1d0119a02 216 Gene3D G3DSA:2.40.30.10 165 211 1.0E-8 T 05-07-2017 AC028_RS11640 1c3fee5cac0eccf6dd7e1da1d0119a02 216 SUPERFAMILY SSF50447 5 215 4.06E-78 T 05-07-2017 IPR009000 Translation protein, beta-barrel domain AC028_RS06820 589f79b94d914d172cfb5ced92a8fc48 175 Pfam PF07484 Phage Tail Collar Domain 7 63 8.3E-23 T 05-07-2017 IPR011083 Phage tail collar domain AC028_RS06820 589f79b94d914d172cfb5ced92a8fc48 175 Gene3D G3DSA:3.90.1340.10 1 68 1.6E-27 T 05-07-2017 IPR011083 Phage tail collar domain AC028_RS06820 589f79b94d914d172cfb5ced92a8fc48 175 SUPERFAMILY SSF88874 1 169 2.49E-47 T 05-07-2017 AC028_RS01800 3c7efbe10201ee99eb2c9073e65fbf2b 144 Pfam PF04134 Protein of unknown function, DUF393 18 127 1.2E-33 T 05-07-2017 IPR007263 Protein of unknown function DUF393 AC028_RS09290 e046756d8e95d7953c6e9884134c21d4 345 Gene3D G3DSA:2.120.10.30 48 342 2.4E-72 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS09290 e046756d8e95d7953c6e9884134c21d4 345 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 203 225 3.3E-6 T 05-07-2017 IPR005511 Senescence marker protein-30 (SMP-30) AC028_RS09290 e046756d8e95d7953c6e9884134c21d4 345 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 63 80 3.3E-6 T 05-07-2017 IPR005511 Senescence marker protein-30 (SMP-30) AC028_RS09290 e046756d8e95d7953c6e9884134c21d4 345 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 272 289 3.3E-6 T 05-07-2017 IPR005511 Senescence marker protein-30 (SMP-30) AC028_RS09290 e046756d8e95d7953c6e9884134c21d4 345 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 62 328 5.0E-51 T 05-07-2017 IPR013658 SMP-30/Gluconolactonase/LRE-like region AC028_RS09290 e046756d8e95d7953c6e9884134c21d4 345 SUPERFAMILY SSF63829 34 337 4.36E-60 T 05-07-2017 AC028_RS09380 bbb76c1035ee7e59897b038308c53b5f 207 Pfam PF12762 ISXO2-like transposase domain 24 172 1.3E-33 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS09380 bbb76c1035ee7e59897b038308c53b5f 207 SMART SM01126 24 172 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS06845 4652114ccc34858e2476152dec5bf0df 249 Pfam PF02405 Permease MlaE 35 245 3.8E-68 T 05-07-2017 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 AC028_RS06845 4652114ccc34858e2476152dec5bf0df 249 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 4 249 2.2E-76 T 05-07-2017 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AC028_RS17280 7d8a1b6a87946a2448d0fa397f4d0f4c 166 SUPERFAMILY SSF69765 4 160 2.22E-64 T 05-07-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AC028_RS17280 7d8a1b6a87946a2448d0fa397f4d0f4c 166 Pfam PF02542 YgbB family 5 158 1.6E-62 T 05-07-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AC028_RS17280 7d8a1b6a87946a2448d0fa397f4d0f4c 166 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 6 159 3.3E-68 T 05-07-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AC028_RS17280 7d8a1b6a87946a2448d0fa397f4d0f4c 166 Gene3D G3DSA:3.30.1330.50 3 160 1.6E-68 T 05-07-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AC028_RS17280 7d8a1b6a87946a2448d0fa397f4d0f4c 166 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 39 54 - T 05-07-2017 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AC028_RS17280 7d8a1b6a87946a2448d0fa397f4d0f4c 166 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 5 160 35.253 T 05-07-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AC028_RS11790 d9c754fef8fe945076c0072807c891aa 465 SUPERFAMILY SSF51569 13 454 6.66E-182 T 05-07-2017 AC028_RS11790 d9c754fef8fe945076c0072807c891aa 465 Pfam PF01474 Class-II DAHP synthetase family 17 451 4.0E-188 T 05-07-2017 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AC028_RS11790 d9c754fef8fe945076c0072807c891aa 465 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 17 458 5.7E-225 T 05-07-2017 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AC028_RS14505 f2f64c5d675c9f3cc1b394450a9dc86f 331 Gene3D G3DSA:3.20.20.100 1 325 2.2E-119 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS14505 f2f64c5d675c9f3cc1b394450a9dc86f 331 SUPERFAMILY SSF51430 1 313 7.73E-102 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS14505 f2f64c5d675c9f3cc1b394450a9dc86f 331 Pfam PF00248 Aldo/keto reductase family 17 310 2.1E-75 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS16740 ec713b002dd70ae6031c5040a1c7d556 189 Pfam PF00161 Ribosome inactivating protein 24 128 1.9E-5 T 05-07-2017 IPR001574 Ribosome-inactivating protein GO:0017148|GO:0030598 AC028_RS16740 ec713b002dd70ae6031c5040a1c7d556 189 SUPERFAMILY SSF56371 6 125 2.18E-5 T 05-07-2017 IPR001574 Ribosome-inactivating protein GO:0017148|GO:0030598 AC028_RS22405 8c824e40969dc1c67859c702308ea264 406 Pfam PF03743 Bacterial conjugation TrbI-like protein 208 385 7.4E-52 T 05-07-2017 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AC028_RS01065 07f59881245d1424de76e7e837bef834 311 Pfam PF13520 Amino acid permease 2 273 3.8E-25 T 05-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AC028_RS12445 f748b3bc8981f1110e14a6caeb49d0f3 154 Gene3D G3DSA:3.30.70.1290 10 134 6.7E-14 T 05-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AC028_RS12445 f748b3bc8981f1110e14a6caeb49d0f3 154 SMART SM01321 19 133 9.2E-22 T 05-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AC028_RS12445 f748b3bc8981f1110e14a6caeb49d0f3 154 Pfam PF01797 Transposase IS200 like 23 130 2.1E-12 T 05-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AC028_RS12445 f748b3bc8981f1110e14a6caeb49d0f3 154 SUPERFAMILY SSF143422 12 136 2.35E-25 T 05-07-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AC028_RS20860 b5d199738a2441f60e7c408c0690ddb4 622 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 130 606 8.4E-123 T 05-07-2017 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AC028_RS20860 b5d199738a2441f60e7c408c0690ddb4 622 Pfam PF02355 Protein export membrane protein 442 610 7.9E-21 T 05-07-2017 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AC028_RS20860 b5d199738a2441f60e7c408c0690ddb4 622 Pfam PF13721 SecD export protein N-terminal TM region 10 110 9.9E-32 T 05-07-2017 IPR027398 SecD export protein N-terminal TM domain AC028_RS20860 b5d199738a2441f60e7c408c0690ddb4 622 Pfam PF07549 SecD/SecF GG Motif 123 148 6.2E-6 T 05-07-2017 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AC028_RS20860 b5d199738a2441f60e7c408c0690ddb4 622 SUPERFAMILY SSF82866 417 614 2.75E-38 T 05-07-2017 AC028_RS20860 b5d199738a2441f60e7c408c0690ddb4 622 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 10 621 45.678 T 05-07-2017 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AC028_RS20860 b5d199738a2441f60e7c408c0690ddb4 622 Gene3D G3DSA:1.20.1640.10 423 618 5.3E-28 T 05-07-2017 AC028_RS20860 b5d199738a2441f60e7c408c0690ddb4 622 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 352 600 3.4E-63 T 05-07-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AC028_RS18760 7e80a9f5782b3396bf9c4602fbca7fd0 209 Gene3D G3DSA:2.50.20.10 24 206 8.9E-54 T 05-07-2017 AC028_RS18760 7e80a9f5782b3396bf9c4602fbca7fd0 209 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 8 207 31.387 T 05-07-2017 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AC028_RS18760 7e80a9f5782b3396bf9c4602fbca7fd0 209 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 5 204 2.2E-20 T 05-07-2017 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AC028_RS18760 7e80a9f5782b3396bf9c4602fbca7fd0 209 SUPERFAMILY SSF89392 23 205 5.1E-43 T 05-07-2017 IPR029046 Lipoprotein localisation LolA/LolB/LppX AC028_RS18760 7e80a9f5782b3396bf9c4602fbca7fd0 209 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 197 1.7E-51 T 05-07-2017 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AC028_RS10055 847d53612171542360fe577c755babbc 232 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 83 98 - T 05-07-2017 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AC028_RS10055 847d53612171542360fe577c755babbc 232 Pfam PF03099 Biotin/lipoate A/B protein ligase family 74 171 6.2E-9 T 05-07-2017 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AC028_RS10055 847d53612171542360fe577c755babbc 232 PIRSF PIRSF016262 15 230 4.9E-60 T 05-07-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AC028_RS10055 847d53612171542360fe577c755babbc 232 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 87 140 7.0E-25 T 05-07-2017 AC028_RS10055 847d53612171542360fe577c755babbc 232 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 39 211 2.4E-64 T 05-07-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AC028_RS10055 847d53612171542360fe577c755babbc 232 SUPERFAMILY SSF55681 15 218 1.99E-69 T 05-07-2017 AC028_RS10055 847d53612171542360fe577c755babbc 232 Hamap MF_00013 Octanoyltransferase [lipB]. 17 218 38.437 T 05-07-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AC028_RS10055 847d53612171542360fe577c755babbc 232 Gene3D G3DSA:3.90.1550.10 19 215 1.7E-73 T 05-07-2017 AC028_RS16690 a3f6767a824e7aae994fc5d3c18a2b4e 178 Pfam PF05838 Glycosyl hydrolase 108 10 97 2.6E-25 T 05-07-2017 IPR008565 Protein of unknown function DUF847 AC028_RS16690 a3f6767a824e7aae994fc5d3c18a2b4e 178 Gene3D G3DSA:1.20.141.10 1 174 3.2E-53 T 05-07-2017 AC028_RS16690 a3f6767a824e7aae994fc5d3c18a2b4e 178 Pfam PF09374 Predicted Peptidoglycan domain 99 171 2.8E-14 T 05-07-2017 IPR018537 Peptidoglycan binding domain AC028_RS16690 a3f6767a824e7aae994fc5d3c18a2b4e 178 SUPERFAMILY SSF53955 1 174 1.88E-49 T 05-07-2017 IPR023346 Lysozyme-like domain AC028_RS09775 27b80d4c45e863313e5f1bd9f4c6c6b7 495 SUPERFAMILY SSF52091 401 485 4.71E-13 T 05-07-2017 IPR002645 STAS domain AC028_RS09775 27b80d4c45e863313e5f1bd9f4c6c6b7 495 Pfam PF00916 Sulfate permease family 145 359 2.4E-26 T 05-07-2017 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AC028_RS09775 27b80d4c45e863313e5f1bd9f4c6c6b7 495 Gene3D G3DSA:3.30.750.24 401 485 4.2E-10 T 05-07-2017 IPR002645 STAS domain AC028_RS09775 27b80d4c45e863313e5f1bd9f4c6c6b7 495 Pfam PF01740 STAS domain 401 485 1.8E-7 T 05-07-2017 IPR002645 STAS domain AC028_RS06005 2ce8f41bf19dce32be54a3dbae19c7b4 293 Gene3D G3DSA:3.30.1600.10 38 72 8.7E-20 T 05-07-2017 IPR026591 Sirtuin family, catalytic core small domain AC028_RS06005 2ce8f41bf19dce32be54a3dbae19c7b4 293 Gene3D G3DSA:3.30.1600.10 125 199 8.7E-20 T 05-07-2017 IPR026591 Sirtuin family, catalytic core small domain AC028_RS06005 2ce8f41bf19dce32be54a3dbae19c7b4 293 Pfam PF02146 Sir2 family 27 229 1.4E-45 T 05-07-2017 IPR003000 Sirtuin family GO:0070403 AC028_RS06005 2ce8f41bf19dce32be54a3dbae19c7b4 293 SUPERFAMILY SSF52467 10 273 6.27E-80 T 05-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AC028_RS06005 2ce8f41bf19dce32be54a3dbae19c7b4 293 Hamap MF_01967 NAD-dependent protein deacetylase [cobB]. 3 273 63.939 T 05-07-2017 IPR026587 Sirtuin, class II AC028_RS06005 2ce8f41bf19dce32be54a3dbae19c7b4 293 Gene3D G3DSA:3.40.50.1220 87 124 1.4E-40 T 05-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AC028_RS06005 2ce8f41bf19dce32be54a3dbae19c7b4 293 Gene3D G3DSA:3.40.50.1220 205 273 1.4E-40 T 05-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AC028_RS06005 2ce8f41bf19dce32be54a3dbae19c7b4 293 Gene3D G3DSA:3.40.50.1220 11 37 1.4E-40 T 05-07-2017 IPR029035 DHS-like NAD/FAD-binding domain AC028_RS16965 bd25faf0040f043d15b2d0f5af1c9bd1 194 SUPERFAMILY SSF52218 1 182 7.71E-52 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS16965 bd25faf0040f043d15b2d0f5af1c9bd1 194 Pfam PF02525 Flavodoxin-like fold 1 183 1.1E-46 T 05-07-2017 IPR003680 Flavodoxin-like fold AC028_RS16965 bd25faf0040f043d15b2d0f5af1c9bd1 194 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 192 31.469 T 05-07-2017 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AC028_RS16965 bd25faf0040f043d15b2d0f5af1c9bd1 194 Gene3D G3DSA:3.40.50.360 1 182 2.5E-61 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS02070 dd42778e22f0520f4ee2dd517f72cf56 447 Pfam PF03080 Domain of unknown function (DUF239) 204 443 3.4E-45 T 05-07-2017 IPR004314 Domain of unknown function DUF239 AC028_RS10155 e6ec38c62a8717ff7cc1b44c133fac63 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 7.9E-53 T 05-07-2017 AC028_RS10155 e6ec38c62a8717ff7cc1b44c133fac63 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 05-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AC028_RS10155 e6ec38c62a8717ff7cc1b44c133fac63 245 Gene3D G3DSA:3.40.50.720 4 242 1.4E-70 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS10155 e6ec38c62a8717ff7cc1b44c133fac63 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.1E-9 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS10155 e6ec38c62a8717ff7cc1b44c133fac63 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.1E-9 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS10155 e6ec38c62a8717ff7cc1b44c133fac63 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.1E-9 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS10155 e6ec38c62a8717ff7cc1b44c133fac63 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.3E-34 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS10155 e6ec38c62a8717ff7cc1b44c133fac63 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.3E-34 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS10155 e6ec38c62a8717ff7cc1b44c133fac63 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.3E-34 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS10155 e6ec38c62a8717ff7cc1b44c133fac63 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.3E-34 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS10155 e6ec38c62a8717ff7cc1b44c133fac63 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.3E-34 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS10155 e6ec38c62a8717ff7cc1b44c133fac63 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 4.3E-34 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS10155 e6ec38c62a8717ff7cc1b44c133fac63 245 SUPERFAMILY SSF51735 5 242 8.82E-69 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS06815 03b76abdb23495bb9a64324b29d22a63 183 Gene3D G3DSA:3.90.1340.10 1 67 7.2E-26 T 05-07-2017 IPR011083 Phage tail collar domain AC028_RS06815 03b76abdb23495bb9a64324b29d22a63 183 SUPERFAMILY SSF88874 1 177 1.2E-45 T 05-07-2017 AC028_RS06815 03b76abdb23495bb9a64324b29d22a63 183 Pfam PF07484 Phage Tail Collar Domain 7 63 2.3E-22 T 05-07-2017 IPR011083 Phage tail collar domain AC028_RS22095 ad3c242060b174cd1372b44ed8ba2a78 80 Pfam PF04070 Domain of unknown function (DUF378) 2 61 3.7E-27 T 05-07-2017 IPR007211 Protein of unknown function DUF378 AC028_RS04305 61467dc73c8a6b1eb4fde014b7fa3783 69 Pfam PF05532 CsbD-like 4 55 2.5E-19 T 05-07-2017 IPR008462 CsbD-like AC028_RS04305 61467dc73c8a6b1eb4fde014b7fa3783 69 Gene3D G3DSA:1.10.1470.10 1 67 2.3E-25 T 05-07-2017 IPR008462 CsbD-like AC028_RS04305 61467dc73c8a6b1eb4fde014b7fa3783 69 PIRSF PIRSF039008 1 66 3.1E-30 T 05-07-2017 IPR026042 Stress response protein YjbJ AC028_RS04305 61467dc73c8a6b1eb4fde014b7fa3783 69 SUPERFAMILY SSF69047 1 66 1.57E-23 T 05-07-2017 IPR008462 CsbD-like AC028_RS00745 ea7c375dea03d7acdef5433c54d0d869 190 Pfam PF06693 Protein of unknown function (DUF1190) 28 180 2.8E-30 T 05-07-2017 IPR009576 Biofilm formation YgiB AC028_RS06170 80460e8684c6d7c5f94566198869b402 419 SUPERFAMILY SSF109604 172 338 2.15E-30 T 05-07-2017 AC028_RS06170 80460e8684c6d7c5f94566198869b402 419 Pfam PF11871 Domain of unknown function (DUF3391) 3 147 1.5E-28 T 05-07-2017 IPR021812 Protein of unknown function DUF3391 AC028_RS06170 80460e8684c6d7c5f94566198869b402 419 SMART SM00471 174 310 1.3E-11 T 05-07-2017 IPR003607 HD/PDEase domain AC028_RS06170 80460e8684c6d7c5f94566198869b402 419 Pfam PF13487 HD domain 229 291 1.1E-15 T 05-07-2017 AC028_RS06170 80460e8684c6d7c5f94566198869b402 419 TIGRFAM TIGR00277 HDIG: HDIG domain 178 268 2.4E-10 T 05-07-2017 IPR006675 HDIG domain AC028_RS06170 80460e8684c6d7c5f94566198869b402 419 Gene3D G3DSA:1.10.3210.10 168 323 2.8E-22 T 05-07-2017 IPR006674 HD domain AC028_RS15025 4c31a6799536f543710b24f031fceef0 117 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 116 3.0E-35 T 05-07-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AC028_RS15025 4c31a6799536f543710b24f031fceef0 117 SUPERFAMILY SSF55620 3 117 1.5E-39 T 05-07-2017 AC028_RS15025 4c31a6799536f543710b24f031fceef0 117 PIRSF PIRSF006113 1 117 2.5E-48 T 05-07-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AC028_RS15025 4c31a6799536f543710b24f031fceef0 117 Gene3D G3DSA:3.30.479.10 1 116 6.2E-40 T 05-07-2017 AC028_RS15025 4c31a6799536f543710b24f031fceef0 117 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 94 1.3E-32 T 05-07-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AC028_RS11920 f345cde02ed18d4e42e588812b5ce87e 693 Pfam PF04185 Phosphoesterase family 46 432 7.2E-105 T 05-07-2017 IPR007312 Phosphoesterase GO:0016788 AC028_RS11920 f345cde02ed18d4e42e588812b5ce87e 693 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 6 690 2.9E-265 T 05-07-2017 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 AC028_RS11920 f345cde02ed18d4e42e588812b5ce87e 693 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 6 36 8.4E-5 T 05-07-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AC028_RS11920 f345cde02ed18d4e42e588812b5ce87e 693 Pfam PF05506 Domain of unknown function (DUF756) 606 677 5.0E-12 T 05-07-2017 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 AC028_RS11920 f345cde02ed18d4e42e588812b5ce87e 693 Pfam PF05506 Domain of unknown function (DUF756) 501 587 8.3E-22 T 05-07-2017 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 AC028_RS11920 f345cde02ed18d4e42e588812b5ce87e 693 SUPERFAMILY SSF53649 150 437 2.49E-5 T 05-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AC028_RS13910 129feda5a17a6272924ceee81018bfe2 268 Pfam PF12872 OST-HTH/LOTUS domain 168 231 3.0E-15 T 05-07-2017 IPR025605 OST-HTH/LOTUS domain AC028_RS13910 129feda5a17a6272924ceee81018bfe2 268 Pfam PF01936 NYN domain 8 142 2.4E-31 T 05-07-2017 IPR021139 NYN domain, limkain-b1-type AC028_RS13910 129feda5a17a6272924ceee81018bfe2 268 Gene3D G3DSA:3.40.50.1010 4 145 3.4E-28 T 05-07-2017 IPR029060 PIN domain-like AC028_RS19920 06f024e92a7859441e2fe492d839b0b4 204 Pfam PF00313 'Cold-shock' DNA-binding domain 5 66 2.6E-9 T 05-07-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AC028_RS19920 06f024e92a7859441e2fe492d839b0b4 204 SMART SM00357 4 68 9.9E-6 T 05-07-2017 IPR011129 Cold shock protein GO:0003676 AC028_RS19920 06f024e92a7859441e2fe492d839b0b4 204 SUPERFAMILY SSF50249 1 67 5.88E-13 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS19920 06f024e92a7859441e2fe492d839b0b4 204 Gene3D G3DSA:2.40.50.140 2 70 5.5E-17 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS19920 06f024e92a7859441e2fe492d839b0b4 204 Pfam PF06961 Protein of unknown function (DUF1294) 117 171 1.7E-22 T 05-07-2017 IPR010718 Protein of unknown function DUF1294 AC028_RS11530 7523608086326f52fa1046acfa0675f2 319 SUPERFAMILY SSF53271 72 307 6.04E-61 T 05-07-2017 IPR029057 Phosphoribosyltransferase-like AC028_RS11530 7523608086326f52fa1046acfa0675f2 319 Gene3D G3DSA:3.40.50.2020 3 162 1.8E-71 T 05-07-2017 IPR029057 Phosphoribosyltransferase-like AC028_RS11530 7523608086326f52fa1046acfa0675f2 319 Gene3D G3DSA:3.40.50.2020 163 292 9.8E-52 T 05-07-2017 IPR029057 Phosphoribosyltransferase-like AC028_RS11530 7523608086326f52fa1046acfa0675f2 319 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 7 318 48.503 T 05-07-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AC028_RS11530 7523608086326f52fa1046acfa0675f2 319 Pfam PF14572 Phosphoribosyl synthetase-associated domain 208 317 1.5E-30 T 05-07-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AC028_RS11530 7523608086326f52fa1046acfa0675f2 319 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 9 317 7.0E-116 T 05-07-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AC028_RS11530 7523608086326f52fa1046acfa0675f2 319 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 8 123 3.9E-46 T 05-07-2017 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AC028_RS11530 7523608086326f52fa1046acfa0675f2 319 SMART SM01400 7 124 4.3E-68 T 05-07-2017 AC028_RS11530 7523608086326f52fa1046acfa0675f2 319 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 132 147 - T 05-07-2017 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AC028_RS14270 0cac49934506b9b4e96675785f3f38ab 478 Pfam PF12040 Domain of unknown function (DUF3526) 272 437 2.6E-39 T 05-07-2017 IPR021913 Protein of unknown function DUF3526 AC028_RS14270 0cac49934506b9b4e96675785f3f38ab 478 Pfam PF12679 ABC-2 family transporter protein 7 260 2.1E-23 T 05-07-2017 IPR032688 ABC-2 family transporter protein GO:0006810 AC028_RS11235 e2cff42e13eff42cc1ce61ffd9217d51 309 SUPERFAMILY SSF103481 208 301 3.01E-6 T 05-07-2017 AC028_RS11235 e2cff42e13eff42cc1ce61ffd9217d51 309 SUPERFAMILY SSF103481 47 143 2.22E-5 T 05-07-2017 AC028_RS16385 fa6a11d9b6107fa04a97f8f844a9a64e 354 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 47 2.9E-12 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS16385 fa6a11d9b6107fa04a97f8f844a9a64e 354 SMART SM00354 1 70 1.7E-17 T 05-07-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AC028_RS16385 fa6a11d9b6107fa04a97f8f844a9a64e 354 SUPERFAMILY SSF47413 1 58 1.53E-13 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS16385 fa6a11d9b6107fa04a97f8f844a9a64e 354 Gene3D G3DSA:1.10.260.40 1 49 9.6E-17 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS16385 fa6a11d9b6107fa04a97f8f844a9a64e 354 Pfam PF13377 Periplasmic binding protein-like domain 169 327 1.5E-32 T 05-07-2017 AC028_RS16385 fa6a11d9b6107fa04a97f8f844a9a64e 354 Gene3D G3DSA:3.40.50.2300 172 307 1.0E-40 T 05-07-2017 AC028_RS16385 fa6a11d9b6107fa04a97f8f844a9a64e 354 Gene3D G3DSA:3.40.50.2300 50 171 1.3E-35 T 05-07-2017 AC028_RS16385 fa6a11d9b6107fa04a97f8f844a9a64e 354 SUPERFAMILY SSF53822 60 331 3.43E-59 T 05-07-2017 IPR028082 Periplasmic binding protein-like I AC028_RS00940 1656158522fa43da5ea09d0363c6f3b6 202 SUPERFAMILY SSF46689 21 78 4.99E-15 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS00940 1656158522fa43da5ea09d0363c6f3b6 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 2.0E-8 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS00940 1656158522fa43da5ea09d0363c6f3b6 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 2.0E-8 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS00940 1656158522fa43da5ea09d0363c6f3b6 202 Gene3D G3DSA:1.10.357.10 27 202 1.5E-29 T 05-07-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AC028_RS00940 1656158522fa43da5ea09d0363c6f3b6 202 SUPERFAMILY SSF48498 93 192 1.09E-6 T 05-07-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AC028_RS00940 1656158522fa43da5ea09d0363c6f3b6 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 73 8.6E-15 T 05-07-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AC028_RS22295 c26469f2fa167aa4886c5f19d583a750 233 Pfam PF02810 SEC-C motif 209 226 4.5E-11 T 05-07-2017 IPR004027 SEC-C motif AC028_RS22295 c26469f2fa167aa4886c5f19d583a750 233 Gene3D G3DSA:3.10.450.50 198 226 1.6E-12 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS22295 c26469f2fa167aa4886c5f19d583a750 233 Pfam PF03695 Uncharacterised protein family (UPF0149) 16 189 1.5E-32 T 05-07-2017 IPR011978 Uncharacterised protein family UPF0149 AC028_RS22295 c26469f2fa167aa4886c5f19d583a750 233 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 14 188 2.3E-61 T 05-07-2017 IPR011978 Uncharacterised protein family UPF0149 AC028_RS22295 c26469f2fa167aa4886c5f19d583a750 233 SUPERFAMILY SSF103642 206 226 2.62E-8 T 05-07-2017 AC028_RS22295 c26469f2fa167aa4886c5f19d583a750 233 SUPERFAMILY SSF101327 14 193 3.66E-32 T 05-07-2017 IPR011978 Uncharacterised protein family UPF0149 AC028_RS13635 58b1fcdcf03fa2ec12396f1f14894497 387 Pfam PF02628 Cytochrome oxidase assembly protein 15 138 7.3E-21 T 05-07-2017 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 AC028_RS13635 58b1fcdcf03fa2ec12396f1f14894497 387 Pfam PF02628 Cytochrome oxidase assembly protein 144 377 2.1E-45 T 05-07-2017 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 AC028_RS15855 c8e70c77991fb7e0e9cfea74f2da4321 511 Gene3D G3DSA:3.30.420.10 129 295 1.7E-8 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS15855 c8e70c77991fb7e0e9cfea74f2da4321 511 Pfam PF00665 Integrase core domain 132 262 5.8E-15 T 05-07-2017 IPR001584 Integrase, catalytic core GO:0015074 AC028_RS15855 c8e70c77991fb7e0e9cfea74f2da4321 511 SUPERFAMILY SSF53098 131 295 4.55E-9 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS03915 b28e803cb35acc16225594b9a39e7265 227 Gene3D G3DSA:3.40.30.10 1 205 6.5E-42 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS03915 b28e803cb35acc16225594b9a39e7265 227 SUPERFAMILY SSF52833 1 211 2.45E-46 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS03915 b28e803cb35acc16225594b9a39e7265 227 Pfam PF01323 DSBA-like thioredoxin domain 2 204 1.2E-39 T 05-07-2017 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AC028_RS08790 f475bc45cf2709767ac1ff85f27ffb7e 109 Gene3D G3DSA:3.40.30.10 21 104 1.6E-13 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS08790 f475bc45cf2709767ac1ff85f27ffb7e 109 Pfam PF00085 Thioredoxin 15 103 1.6E-12 T 05-07-2017 IPR013766 Thioredoxin domain GO:0045454 AC028_RS08790 f475bc45cf2709767ac1ff85f27ffb7e 109 SUPERFAMILY SSF52833 18 103 1.47E-18 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS17175 db4ca21c5dcedaee1640a2eb90e149dd 496 SMART SM00729 208 418 7.8E-18 T 05-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AC028_RS17175 db4ca21c5dcedaee1640a2eb90e149dd 496 SUPERFAMILY SSF102114 193 402 4.58E-32 T 05-07-2017 AC028_RS17175 db4ca21c5dcedaee1640a2eb90e149dd 496 Pfam PF02310 B12 binding domain 22 134 1.1E-7 T 05-07-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AC028_RS17175 db4ca21c5dcedaee1640a2eb90e149dd 496 Pfam PF04055 Radical SAM superfamily 215 373 1.1E-13 T 05-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AC028_RS17175 db4ca21c5dcedaee1640a2eb90e149dd 496 Gene3D G3DSA:3.80.30.20 208 421 3.0E-32 T 05-07-2017 IPR023404 Radical SAM, alpha/beta horseshoe AC028_RS14165 b65df9dfa78651c7fbdbd37652ae31ad 133 PIRSF PIRSF029208 1 132 9.7E-48 T 05-07-2017 IPR016912 Bacteriophage P2, GpU AC028_RS14165 b65df9dfa78651c7fbdbd37652ae31ad 133 Pfam PF06995 Phage P2 GpU 6 124 1.9E-41 T 05-07-2017 IPR009734 Myoviridae, GpU AC028_RS05900 dd8d08dbf89917d370b287677fe1a51f 296 Pfam PF01522 Polysaccharide deacetylase 74 182 2.9E-9 T 05-07-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 AC028_RS05900 dd8d08dbf89917d370b287677fe1a51f 296 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 4 296 1.2E-156 T 05-07-2017 IPR017625 Putative urate catabolism protein AC028_RS05900 dd8d08dbf89917d370b287677fe1a51f 296 Gene3D G3DSA:3.20.20.370 3 295 5.6E-94 T 05-07-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 AC028_RS05900 dd8d08dbf89917d370b287677fe1a51f 296 SUPERFAMILY SSF88713 4 295 6.67E-80 T 05-07-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AC028_RS14995 2fbd1b84c4d60d8d41aeafcf7a87e038 224 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 3 216 27.582 T 05-07-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AC028_RS14995 2fbd1b84c4d60d8d41aeafcf7a87e038 224 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 177 1.8E-48 T 05-07-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AC028_RS14995 2fbd1b84c4d60d8d41aeafcf7a87e038 224 Pfam PF13500 AAA domain 5 212 8.5E-38 T 05-07-2017 AC028_RS14995 2fbd1b84c4d60d8d41aeafcf7a87e038 224 Gene3D G3DSA:3.40.50.300 3 221 2.0E-75 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS14995 2fbd1b84c4d60d8d41aeafcf7a87e038 224 SUPERFAMILY SSF52540 1 217 1.15E-60 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS14995 2fbd1b84c4d60d8d41aeafcf7a87e038 224 PIRSF PIRSF006755 2 221 1.7E-75 T 05-07-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AC028_RS08740 bba8402325da4def1acc8a6afa9dc476 62 Gene3D G3DSA:1.10.1470.10 1 60 1.9E-21 T 05-07-2017 IPR008462 CsbD-like AC028_RS08740 bba8402325da4def1acc8a6afa9dc476 62 SUPERFAMILY SSF69047 1 60 1.06E-16 T 05-07-2017 IPR008462 CsbD-like AC028_RS08740 bba8402325da4def1acc8a6afa9dc476 62 Pfam PF05532 CsbD-like 4 56 4.0E-19 T 05-07-2017 IPR008462 CsbD-like AC028_RS13280 01dbcc6e5c4cde10a4a45e9d13383100 204 ProSitePatterns PS00018 EF-hand calcium-binding domain. 181 193 - T 05-07-2017 IPR018247 EF-Hand 1, calcium-binding site AC028_RS13280 01dbcc6e5c4cde10a4a45e9d13383100 204 Pfam PF06078 Bacterial protein of unknown function (DUF937) 9 143 2.7E-29 T 05-07-2017 IPR009282 Protein of unknown function DUF937 AC028_RS20605 cbf9df2ff31f12a9d1cd6e7d68724835 333 SUPERFAMILY SSF144083 269 330 5.49E-16 T 05-07-2017 AC028_RS20605 cbf9df2ff31f12a9d1cd6e7d68724835 333 Gene3D G3DSA:1.20.58.340 258 333 1.3E-20 T 05-07-2017 AC028_RS20605 cbf9df2ff31f12a9d1cd6e7d68724835 333 Pfam PF01544 CorA-like Mg2+ transporter protein 42 329 4.2E-61 T 05-07-2017 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AC028_RS20605 cbf9df2ff31f12a9d1cd6e7d68724835 333 SUPERFAMILY SSF143865 7 265 1.31E-72 T 05-07-2017 AC028_RS20605 cbf9df2ff31f12a9d1cd6e7d68724835 333 Gene3D G3DSA:1.20.58.340 142 254 5.4E-38 T 05-07-2017 AC028_RS20605 cbf9df2ff31f12a9d1cd6e7d68724835 333 Gene3D G3DSA:3.30.460.20 9 141 1.5E-38 T 05-07-2017 AC028_RS03040 2d793fc8d86cfa1a975e38f1ceaba565 314 Gene3D G3DSA:3.30.1180.10 169 307 4.1E-17 T 05-07-2017 AC028_RS03040 2d793fc8d86cfa1a975e38f1ceaba565 314 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 305 3.4E-37 T 05-07-2017 IPR003797 DegV AC028_RS03040 2d793fc8d86cfa1a975e38f1ceaba565 314 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 307 6.8E-79 T 05-07-2017 IPR003797 DegV AC028_RS03040 2d793fc8d86cfa1a975e38f1ceaba565 314 SUPERFAMILY SSF82549 1 306 2.12E-57 T 05-07-2017 AC028_RS03040 2d793fc8d86cfa1a975e38f1ceaba565 314 Gene3D G3DSA:3.40.50.10170 1 167 2.1E-34 T 05-07-2017 AC028_RS10850 db45f31af6893e4c32dc654cd7e443d8 730 Pfam PF16990 Carbohydrate binding module (family 35) 614 713 3.0E-9 T 05-07-2017 IPR005084 Carbohydrate binding module family 6 GO:0030246 AC028_RS10850 db45f31af6893e4c32dc654cd7e443d8 730 Gene3D G3DSA:2.60.120.260 599 728 2.7E-19 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS10850 db45f31af6893e4c32dc654cd7e443d8 730 Pfam PF08307 Glycosyl hydrolase family 98 C-terminal domain 342 512 1.5E-10 T 05-07-2017 IPR013190 Glycosyl hydrolase family 98, C-terminal KEGG: 00052+3.2.1.10|KEGG: 00500+3.2.1.10 AC028_RS10850 db45f31af6893e4c32dc654cd7e443d8 730 SUPERFAMILY SSF49785 600 726 5.71E-14 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS10850 db45f31af6893e4c32dc654cd7e443d8 730 Pfam PF08306 Glycosyl hydrolase family 98 17 335 1.9E-121 T 05-07-2017 IPR013191 Glycosyl hydrolase family 98, central domain KEGG: 00052+3.2.1.10|KEGG: 00500+3.2.1.10 AC028_RS07310 75d7009a40479c1d3fa473e5cd9d993c 143 Gene3D G3DSA:3.30.565.10 28 131 6.2E-6 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS07310 75d7009a40479c1d3fa473e5cd9d993c 143 SUPERFAMILY SSF55874 30 126 2.54E-7 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS07310 75d7009a40479c1d3fa473e5cd9d993c 143 Pfam PF13581 Histidine kinase-like ATPase domain 8 130 1.3E-22 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS07635 e6dd742060c97515e4f99b4cdc5648f0 523 Gene3D G3DSA:3.60.21.10 136 519 1.0E-29 T 05-07-2017 IPR029052 Metallo-dependent phosphatase-like AC028_RS07635 e6dd742060c97515e4f99b4cdc5648f0 523 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 44 129 3.8E-19 T 05-07-2017 IPR032093 Phospholipase D, N-terminal AC028_RS07635 e6dd742060c97515e4f99b4cdc5648f0 523 SUPERFAMILY SSF56300 138 515 9.28E-43 T 05-07-2017 IPR029052 Metallo-dependent phosphatase-like AC028_RS07635 e6dd742060c97515e4f99b4cdc5648f0 523 Pfam PF09423 PhoD-like phosphatase 159 502 4.6E-80 T 05-07-2017 IPR018946 Alkaline phosphatase D-related AC028_RS07235 1ee23a1010ba5e0bcb3ea28d3a697231 423 SUPERFAMILY SSF53254 38 404 1.68E-40 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS07235 1ee23a1010ba5e0bcb3ea28d3a697231 423 Gene3D G3DSA:3.40.50.1240 38 148 2.0E-41 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS07235 1ee23a1010ba5e0bcb3ea28d3a697231 423 Gene3D G3DSA:3.40.50.1240 265 408 2.0E-41 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS07235 1ee23a1010ba5e0bcb3ea28d3a697231 423 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 39 140 2.6E-9 T 05-07-2017 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 AC028_RS07235 1ee23a1010ba5e0bcb3ea28d3a697231 423 Gene3D G3DSA:3.40.50.1240 149 259 1.3E-19 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS00570 d510f7e35cad8539a6995756a5dfb43b 462 Pfam PF00324 Amino acid permease 28 435 1.6E-93 T 05-07-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AC028_RS00570 d510f7e35cad8539a6995756a5dfb43b 462 PIRSF PIRSF006060 6 456 3.7E-69 T 05-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AC028_RS00570 d510f7e35cad8539a6995756a5dfb43b 462 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 05-07-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AC028_RS01025 1ebae7b04851f0ea447fcf5d1952ec0c 338 SUPERFAMILY SSF53067 18 335 1.87E-51 T 05-07-2017 AC028_RS01025 1ebae7b04851f0ea447fcf5d1952ec0c 338 Pfam PF02685 Glucokinase 20 334 2.1E-101 T 05-07-2017 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AC028_RS01025 1ebae7b04851f0ea447fcf5d1952ec0c 338 Gene3D G3DSA:3.40.367.20 120 319 1.3E-63 T 05-07-2017 AC028_RS00485 a4d2b6259c593f0ca74891a25fab19f3 191 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 2 188 22.217 T 05-07-2017 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AC028_RS00485 a4d2b6259c593f0ca74891a25fab19f3 191 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 10 185 1.5E-47 T 05-07-2017 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AC028_RS00485 a4d2b6259c593f0ca74891a25fab19f3 191 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 14 186 5.2E-41 T 05-07-2017 IPR010664 Lipopolysaccharide assembly, LptC-related AC028_RS06655 33646a666ae97a34c18cde578d542c8d 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.8E-19 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06655 33646a666ae97a34c18cde578d542c8d 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 5.8E-19 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06655 33646a666ae97a34c18cde578d542c8d 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 5.8E-19 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06655 33646a666ae97a34c18cde578d542c8d 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 5.8E-19 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06655 33646a666ae97a34c18cde578d542c8d 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 5.8E-19 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06655 33646a666ae97a34c18cde578d542c8d 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 1.4E-7 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06655 33646a666ae97a34c18cde578d542c8d 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 1.4E-7 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06655 33646a666ae97a34c18cde578d542c8d 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 1.4E-7 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06655 33646a666ae97a34c18cde578d542c8d 277 Gene3D G3DSA:3.40.50.720 2 246 1.1E-57 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS06655 33646a666ae97a34c18cde578d542c8d 277 SUPERFAMILY SSF51735 3 216 5.39E-56 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS06655 33646a666ae97a34c18cde578d542c8d 277 Pfam PF00106 short chain dehydrogenase 3 188 4.3E-44 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13960 8950f0acfb27391797145fa4c7d4c640 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 253 6.7E-62 T 05-07-2017 AC028_RS13960 8950f0acfb27391797145fa4c7d4c640 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 3.4E-36 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13960 8950f0acfb27391797145fa4c7d4c640 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 3.4E-36 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13960 8950f0acfb27391797145fa4c7d4c640 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 3.4E-36 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13960 8950f0acfb27391797145fa4c7d4c640 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 3.4E-36 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13960 8950f0acfb27391797145fa4c7d4c640 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 3.4E-36 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13960 8950f0acfb27391797145fa4c7d4c640 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 3.4E-36 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13960 8950f0acfb27391797145fa4c7d4c640 258 Gene3D G3DSA:3.40.50.720 5 254 9.4E-86 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS13960 8950f0acfb27391797145fa4c7d4c640 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 05-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AC028_RS13960 8950f0acfb27391797145fa4c7d4c640 258 SUPERFAMILY SSF51735 9 255 4.55E-80 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS13960 8950f0acfb27391797145fa4c7d4c640 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 2.9E-7 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13960 8950f0acfb27391797145fa4c7d4c640 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 2.9E-7 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS13960 8950f0acfb27391797145fa4c7d4c640 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 2.9E-7 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS00260 4be156fe86c7372c8fe77a8901a14768 345 SMART SM00382 122 248 0.0063 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS00260 4be156fe86c7372c8fe77a8901a14768 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 341 6.5E-158 T 05-07-2017 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 AC028_RS00260 4be156fe86c7372c8fe77a8901a14768 345 Gene3D G3DSA:3.40.50.300 100 339 3.6E-70 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS00260 4be156fe86c7372c8fe77a8901a14768 345 Pfam PF00437 Type II/IV secretion system protein 12 268 1.4E-46 T 05-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AC028_RS00260 4be156fe86c7372c8fe77a8901a14768 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 05-07-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AC028_RS00260 4be156fe86c7372c8fe77a8901a14768 345 SUPERFAMILY SSF52540 5 336 7.19E-72 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS03895 4b65b6cf2d3968128a20a87a750be17c 184 SUPERFAMILY SSF53271 6 183 5.24E-45 T 05-07-2017 IPR029057 Phosphoribosyltransferase-like AC028_RS03895 4b65b6cf2d3968128a20a87a750be17c 184 Pfam PF00156 Phosphoribosyl transferase domain 15 170 1.5E-21 T 05-07-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 AC028_RS03895 4b65b6cf2d3968128a20a87a750be17c 184 Gene3D G3DSA:3.40.50.2020 10 184 1.3E-47 T 05-07-2017 IPR029057 Phosphoribosyltransferase-like AC028_RS02280 e9cad18fa534d15296985fee7378e688 950 PIRSF PIRSF035905 2 939 4.6E-68 T 05-07-2017 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein AC028_RS02280 e9cad18fa534d15296985fee7378e688 950 Pfam PF10101 Predicted membrane protein (DUF2339) 187 929 7.5E-139 T 05-07-2017 IPR019286 Protein of unknown function DUF2339, transmembrane AC028_RS11835 15e7ec6a96dac953ad72dfe0022abf6c 153 Pfam PF07486 Cell Wall Hydrolase 35 142 5.4E-17 T 05-07-2017 IPR011105 Cell wall hydrolase, SleB GO:0016787 AC028_RS01120 f7863d2f3b741a092491260ca0a24d09 387 SUPERFAMILY SSF50939 36 354 4.91E-63 T 05-07-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 AC028_RS01120 f7863d2f3b741a092491260ca0a24d09 387 Gene3D G3DSA:2.120.10.10 39 356 3.1E-70 T 05-07-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 AC028_RS01120 f7863d2f3b741a092491260ca0a24d09 387 Pfam PF13088 BNR repeat-like domain 61 337 5.0E-91 T 05-07-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 AC028_RS09780 c830e7542d07cca946773633d7c6b2d0 317 Gene3D G3DSA:3.30.70.270 138 297 4.7E-48 T 05-07-2017 AC028_RS09780 c830e7542d07cca946773633d7c6b2d0 317 Pfam PF00990 Diguanylate cyclase, GGDEF domain 136 291 1.5E-35 T 05-07-2017 IPR000160 GGDEF domain AC028_RS09780 c830e7542d07cca946773633d7c6b2d0 317 SMART SM00267 125 295 3.9E-40 T 05-07-2017 IPR000160 GGDEF domain AC028_RS09780 c830e7542d07cca946773633d7c6b2d0 317 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 135 294 6.4E-39 T 05-07-2017 IPR000160 GGDEF domain AC028_RS09780 c830e7542d07cca946773633d7c6b2d0 317 SUPERFAMILY SSF55073 141 295 1.88E-40 T 05-07-2017 IPR029787 Nucleotide cyclase AC028_RS13195 7300ee1cdb02ff83cbd79c404f5d13d4 508 SUPERFAMILY SSF51445 51 393 1.28E-83 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS13195 7300ee1cdb02ff83cbd79c404f5d13d4 508 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 311 501 2.2E-40 T 05-07-2017 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 AC028_RS13195 7300ee1cdb02ff83cbd79c404f5d13d4 508 SUPERFAMILY SSF51011 374 507 3.6E-29 T 05-07-2017 AC028_RS13195 7300ee1cdb02ff83cbd79c404f5d13d4 508 SMART SM00813 311 501 2.6E-88 T 05-07-2017 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 AC028_RS19945 97c8b53f32ac13e712a32d255c75a124 36 Pfam PF08173 Membrane bound YbgT-like protein 1 27 6.3E-15 T 05-07-2017 IPR012994 Membrane bound YbgT-like AC028_RS19945 97c8b53f32ac13e712a32d255c75a124 36 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 28 4.4E-19 T 05-07-2017 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 AC028_RS18405 471e11761e367fd5b69c947521344ed6 112 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 29 104 2.4E-34 T 05-07-2017 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 AC028_RS18405 471e11761e367fd5b69c947521344ed6 112 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 33 102 1.2E-25 T 05-07-2017 IPR001543 Surface presentation of antigen (SpoA) AC028_RS18405 471e11761e367fd5b69c947521344ed6 112 Gene3D G3DSA:2.30.330.10 20 112 1.6E-37 T 05-07-2017 AC028_RS18405 471e11761e367fd5b69c947521344ed6 112 PRINTS PR00956 Flagellar motor switch protein FliN signature 65 78 2.9E-26 T 05-07-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AC028_RS18405 471e11761e367fd5b69c947521344ed6 112 PRINTS PR00956 Flagellar motor switch protein FliN signature 32 48 2.9E-26 T 05-07-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AC028_RS18405 471e11761e367fd5b69c947521344ed6 112 PRINTS PR00956 Flagellar motor switch protein FliN signature 49 65 2.9E-26 T 05-07-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AC028_RS18405 471e11761e367fd5b69c947521344ed6 112 PRINTS PR00956 Flagellar motor switch protein FliN signature 78 93 2.9E-26 T 05-07-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AC028_RS18405 471e11761e367fd5b69c947521344ed6 112 SUPERFAMILY SSF101801 29 110 1.96E-25 T 05-07-2017 IPR001543 Surface presentation of antigen (SpoA) AC028_RS12185 1560e2412f4f72ee77d54010c5c1ff88 81 Gene3D G3DSA:3.10.20.30 3 81 3.6E-19 T 05-07-2017 IPR012675 Beta-grasp domain AC028_RS12185 1560e2412f4f72ee77d54010c5c1ff88 81 SUPERFAMILY SSF54285 4 81 1.61E-17 T 05-07-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AC028_RS12185 1560e2412f4f72ee77d54010c5c1ff88 81 Pfam PF02597 ThiS family 7 81 4.8E-17 T 05-07-2017 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 AC028_RS09320 f76a56cea1779a8139b0af8d989a6727 330 Gene3D G3DSA:3.20.20.80 28 324 2.1E-73 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS09320 f76a56cea1779a8139b0af8d989a6727 330 SUPERFAMILY SSF51445 20 325 4.99E-84 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS09320 f76a56cea1779a8139b0af8d989a6727 330 PRINTS PR00134 Glycosyl hydrolase family 10 signature 211 223 2.1E-5 T 05-07-2017 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 AC028_RS09320 f76a56cea1779a8139b0af8d989a6727 330 PRINTS PR00134 Glycosyl hydrolase family 10 signature 130 141 2.1E-5 T 05-07-2017 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 AC028_RS09320 f76a56cea1779a8139b0af8d989a6727 330 PRINTS PR00134 Glycosyl hydrolase family 10 signature 183 194 2.1E-5 T 05-07-2017 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 AC028_RS09320 f76a56cea1779a8139b0af8d989a6727 330 PRINTS PR00134 Glycosyl hydrolase family 10 signature 89 101 2.1E-5 T 05-07-2017 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 AC028_RS09320 f76a56cea1779a8139b0af8d989a6727 330 SMART SM00633 58 323 2.5E-17 T 05-07-2017 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 AC028_RS09320 f76a56cea1779a8139b0af8d989a6727 330 Pfam PF00331 Glycosyl hydrolase family 10 32 319 3.0E-52 T 05-07-2017 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 AC028_RS18570 6525c4131c2157bb10b583785ab2123b 188 Pfam PF16823 Atypical PilZ domain, cyclic di-GMP receptor 46 186 1.3E-48 T 05-07-2017 IPR031800 Cyclic di-GMP receptor, atypical PilZ domain AC028_RS02330 4bd90663046df5da1f59cc94aa1ee871 204 Gene3D G3DSA:3.40.50.300 24 204 4.0E-53 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02330 4bd90663046df5da1f59cc94aa1ee871 204 SUPERFAMILY SSF52540 10 204 2.72E-56 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS02330 4bd90663046df5da1f59cc94aa1ee871 204 SMART SM00382 22 204 3.5E-10 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS02330 4bd90663046df5da1f59cc94aa1ee871 204 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 05-07-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AC028_RS02330 4bd90663046df5da1f59cc94aa1ee871 204 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 3 204 3.5E-87 T 05-07-2017 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 AC028_RS02330 4bd90663046df5da1f59cc94aa1ee871 204 Pfam PF00005 ABC transporter 24 157 2.5E-31 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS12285 72be74b1763fe247f793253b26c33f9e 146 Pfam PF08670 MEKHLA domain 9 142 9.1E-45 T 05-07-2017 IPR013978 MEKHLA AC028_RS12285 72be74b1763fe247f793253b26c33f9e 146 SUPERFAMILY SSF55785 36 134 3.84E-11 T 05-07-2017 IPR000014 PAS domain AC028_RS12285 72be74b1763fe247f793253b26c33f9e 146 Gene3D G3DSA:3.30.450.20 42 135 8.7E-10 T 05-07-2017 AC028_RS12285 72be74b1763fe247f793253b26c33f9e 146 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 53 120 5.7E-6 T 05-07-2017 IPR000014 PAS domain AC028_RS18235 2802d45b623c23044fa147d671a08014 324 Pfam PF00691 OmpA family 167 265 3.6E-17 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS18235 2802d45b623c23044fa147d671a08014 324 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 57 1.7E-22 T 05-07-2017 IPR025713 Motility protein B, N-terminal domain AC028_RS18235 2802d45b623c23044fa147d671a08014 324 SUPERFAMILY SSF103088 142 271 1.31E-30 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS18235 2802d45b623c23044fa147d671a08014 324 Gene3D G3DSA:3.30.1330.60 147 271 6.4E-32 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS00965 2835943e8e7294461c9a01cb08e72f86 459 SUPERFAMILY SSF56601 74 424 2.01E-74 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS00965 2835943e8e7294461c9a01cb08e72f86 459 Gene3D G3DSA:3.40.710.10 75 402 2.0E-72 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS00965 2835943e8e7294461c9a01cb08e72f86 459 Pfam PF00144 Beta-lactamase 80 405 1.2E-64 T 05-07-2017 IPR001466 Beta-lactamase-related AC028_RS17935 ffbf7ff160d1d52e346dc730c50164a4 619 Gene3D G3DSA:3.40.50.300 8 171 3.4E-33 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS17935 ffbf7ff160d1d52e346dc730c50164a4 619 Pfam PF07664 Ferrous iron transport protein B C terminus 398 450 1.6E-14 T 05-07-2017 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 AC028_RS17935 ffbf7ff160d1d52e346dc730c50164a4 619 Pfam PF02421 Ferrous iron transport protein B 9 167 4.1E-52 T 05-07-2017 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 AC028_RS17935 ffbf7ff160d1d52e346dc730c50164a4 619 SUPERFAMILY SSF52540 7 171 1.0E-33 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS17935 ffbf7ff160d1d52e346dc730c50164a4 619 Pfam PF07670 Nucleoside recognition 455 588 2.2E-25 T 05-07-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AC028_RS17935 ffbf7ff160d1d52e346dc730c50164a4 619 Pfam PF07670 Nucleoside recognition 286 380 4.8E-13 T 05-07-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AC028_RS17935 ffbf7ff160d1d52e346dc730c50164a4 619 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 31 49 3.3E-5 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS17935 ffbf7ff160d1d52e346dc730c50164a4 619 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 10 30 3.3E-5 T 05-07-2017 IPR006073 GTP binding domain GO:0005525 AC028_RS20950 1085cfe3bbffcbac1c633622d2ba778e 207 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 14 192 2.1E-42 T 05-07-2017 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AC028_RS20950 1085cfe3bbffcbac1c633622d2ba778e 207 Pfam PF03602 Conserved hypothetical protein 95 16 191 1.0E-51 T 05-07-2017 AC028_RS20950 1085cfe3bbffcbac1c633622d2ba778e 207 SUPERFAMILY SSF53335 16 191 1.33E-43 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS20950 1085cfe3bbffcbac1c633622d2ba778e 207 PIRSF PIRSF004553 15 194 3.3E-43 T 05-07-2017 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AC028_RS20950 1085cfe3bbffcbac1c633622d2ba778e 207 Gene3D G3DSA:3.40.50.150 8 193 2.8E-58 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS00760 e4eabbd47e3e8159c62759707f1cd9ba 360 SUPERFAMILY SSF81324 6 143 1.16E-13 T 05-07-2017 AC028_RS00760 e4eabbd47e3e8159c62759707f1cd9ba 360 Pfam PF07885 Ion channel 47 101 1.0E-9 T 05-07-2017 IPR013099 Potassium channel domain AC028_RS00760 e4eabbd47e3e8159c62759707f1cd9ba 360 SUPERFAMILY SSF51735 121 230 4.23E-6 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS00760 e4eabbd47e3e8159c62759707f1cd9ba 360 Gene3D G3DSA:1.10.287.70 26 111 4.7E-10 T 05-07-2017 AC028_RS00760 e4eabbd47e3e8159c62759707f1cd9ba 360 Gene3D G3DSA:3.40.50.720 117 229 1.3E-11 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS16670 e54cc54b284e485746b7779d1bb75188 423 PIRSF PIRSF038800 2 422 1.4E-156 T 05-07-2017 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AC028_RS16670 e54cc54b284e485746b7779d1bb75188 423 Gene3D G3DSA:3.90.1150.10 273 420 1.4E-53 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS16670 e54cc54b284e485746b7779d1bb75188 423 Hamap MF_01970 Kynureninase [kynU]. 2 421 45.601 T 05-07-2017 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AC028_RS16670 e54cc54b284e485746b7779d1bb75188 423 TIGRFAM TIGR01814 kynureninase: kynureninase 11 421 4.2E-157 T 05-07-2017 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AC028_RS16670 e54cc54b284e485746b7779d1bb75188 423 Gene3D G3DSA:3.40.640.10 77 265 3.7E-19 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS16670 e54cc54b284e485746b7779d1bb75188 423 Pfam PF00266 Aminotransferase class-V 69 361 3.1E-10 T 05-07-2017 IPR000192 Aminotransferase class V domain AC028_RS16670 e54cc54b284e485746b7779d1bb75188 423 SUPERFAMILY SSF53383 7 419 9.22E-75 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS11190 0d6ff47376a1e20bfe455f7d4fe3452d 165 SUPERFAMILY SSF47473 112 163 2.3E-7 T 05-07-2017 IPR011992 EF-hand domain pair AC028_RS11190 0d6ff47376a1e20bfe455f7d4fe3452d 165 Gene3D G3DSA:1.10.238.10 113 159 1.5E-6 T 05-07-2017 IPR011992 EF-hand domain pair AC028_RS11190 0d6ff47376a1e20bfe455f7d4fe3452d 165 Pfam PF13202 EF hand 116 132 7.7E-6 T 05-07-2017 IPR002048 EF-hand domain GO:0005509 AC028_RS11470 660114066afc27a9a3c7aaa65982ff6d 203 SUPERFAMILY SSF52833 9 21 4.95E-33 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS11470 660114066afc27a9a3c7aaa65982ff6d 203 SUPERFAMILY SSF52833 55 195 4.95E-33 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS11470 660114066afc27a9a3c7aaa65982ff6d 203 Pfam PF00578 AhpC/TSA family 67 181 5.6E-17 T 05-07-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AC028_RS11470 660114066afc27a9a3c7aaa65982ff6d 203 ProSitePatterns PS00194 Thioredoxin family active site. 93 111 - T 05-07-2017 IPR017937 Thioredoxin, conserved site GO:0045454 AC028_RS11470 660114066afc27a9a3c7aaa65982ff6d 203 Gene3D G3DSA:3.40.30.10 62 196 1.9E-41 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS11470 660114066afc27a9a3c7aaa65982ff6d 203 Gene3D G3DSA:3.40.30.10 4 30 1.9E-41 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS07260 dd835ab353aca946edc1492a78fc2e0d 306 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 10 279 2.1E-116 T 05-07-2017 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 AC028_RS07260 dd835ab353aca946edc1492a78fc2e0d 306 SUPERFAMILY SSF52096 6 233 1.35E-34 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS07260 dd835ab353aca946edc1492a78fc2e0d 306 Gene3D G3DSA:3.90.226.10 10 197 3.9E-31 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS07260 dd835ab353aca946edc1492a78fc2e0d 306 Pfam PF01039 Carboxyl transferase domain 17 197 5.1E-18 T 05-07-2017 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AC028_RS02990 6c1a3f9f53693588d9e65dad8b46511d 258 SUPERFAMILY SSF88713 66 252 8.4E-49 T 05-07-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AC028_RS02990 6c1a3f9f53693588d9e65dad8b46511d 258 Gene3D G3DSA:3.20.20.370 62 252 4.7E-46 T 05-07-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 AC028_RS02990 6c1a3f9f53693588d9e65dad8b46511d 258 Pfam PF01522 Polysaccharide deacetylase 75 193 2.1E-30 T 05-07-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 AC028_RS21910 32cd0d2e77726880dc3ddae7780dfe78 163 Pfam PF03061 Thioesterase superfamily 22 95 1.3E-18 T 05-07-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 AC028_RS21910 32cd0d2e77726880dc3ddae7780dfe78 163 Gene3D G3DSA:3.10.129.10 5 140 1.8E-41 T 05-07-2017 IPR029069 HotDog domain AC028_RS21910 32cd0d2e77726880dc3ddae7780dfe78 163 SUPERFAMILY SSF54637 8 155 2.96E-41 T 05-07-2017 IPR029069 HotDog domain AC028_RS05010 3d1f4440975463e1040375231f84e98b 61 Pfam PF14441 OTT_1508-like deaminase 1 59 1.2E-11 T 05-07-2017 IPR027796 OTT_1508-like deaminase AC028_RS04435 58b380113093cc753b5ca376f7237ede 507 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 351 359 - T 05-07-2017 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS04435 58b380113093cc753b5ca376f7237ede 507 Gene3D G3DSA:2.40.180.10 24 375 7.5E-166 T 05-07-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS04435 58b380113093cc753b5ca376f7237ede 507 Pfam PF06628 Catalase-related immune-responsive 430 488 6.2E-13 T 05-07-2017 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS04435 58b380113093cc753b5ca376f7237ede 507 Pfam PF00199 Catalase 28 405 1.9E-164 T 05-07-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS04435 58b380113093cc753b5ca376f7237ede 507 SUPERFAMILY SSF56634 23 495 1.09E-188 T 05-07-2017 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS04435 58b380113093cc753b5ca376f7237ede 507 SMART SM01060 28 408 2.0E-244 T 05-07-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS04435 58b380113093cc753b5ca376f7237ede 507 PRINTS PR00067 Catalase signature 338 364 1.7E-67 T 05-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS04435 58b380113093cc753b5ca376f7237ede 507 PRINTS PR00067 Catalase signature 103 121 1.7E-67 T 05-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS04435 58b380113093cc753b5ca376f7237ede 507 PRINTS PR00067 Catalase signature 41 64 1.7E-67 T 05-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS04435 58b380113093cc753b5ca376f7237ede 507 PRINTS PR00067 Catalase signature 306 333 1.7E-67 T 05-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS04435 58b380113093cc753b5ca376f7237ede 507 PRINTS PR00067 Catalase signature 124 141 1.7E-67 T 05-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS04435 58b380113093cc753b5ca376f7237ede 507 PRINTS PR00067 Catalase signature 143 161 1.7E-67 T 05-07-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS04435 58b380113093cc753b5ca376f7237ede 507 ProSitePatterns PS00438 Catalase proximal active site signature. 64 80 - T 05-07-2017 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS04435 58b380113093cc753b5ca376f7237ede 507 PIRSF PIRSF038928 20 496 7.9E-175 T 05-07-2017 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 AC028_RS07220 fd264b7f2d31f92e9f54322a21b1f429 196 SUPERFAMILY SSF55469 10 195 1.11E-43 T 05-07-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AC028_RS07220 fd264b7f2d31f92e9f54322a21b1f429 196 Gene3D G3DSA:3.40.109.10 5 194 4.9E-43 T 05-07-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AC028_RS07220 fd264b7f2d31f92e9f54322a21b1f429 196 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 196 47.299 T 05-07-2017 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 AC028_RS07220 fd264b7f2d31f92e9f54322a21b1f429 196 Pfam PF00881 Nitroreductase family 16 158 1.3E-15 T 05-07-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 AC028_RS01370 4f39955949e664b49e9f5baba84a54c4 335 SUPERFAMILY SSF55785 10 125 2.62E-21 T 05-07-2017 IPR000014 PAS domain AC028_RS01370 4f39955949e664b49e9f5baba84a54c4 335 Pfam PF08448 PAS fold 19 128 1.4E-15 T 05-07-2017 IPR013656 PAS fold-4 AC028_RS01370 4f39955949e664b49e9f5baba84a54c4 335 SMART SM00911 140 222 2.3E-32 T 05-07-2017 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AC028_RS01370 4f39955949e664b49e9f5baba84a54c4 335 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 134 2.3E-14 T 05-07-2017 IPR000014 PAS domain AC028_RS01370 4f39955949e664b49e9f5baba84a54c4 335 Gene3D G3DSA:3.30.450.20 9 126 1.1E-21 T 05-07-2017 AC028_RS01370 4f39955949e664b49e9f5baba84a54c4 335 Pfam PF07536 HWE histidine kinase 140 221 1.6E-25 T 05-07-2017 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AC028_RS01370 4f39955949e664b49e9f5baba84a54c4 335 SUPERFAMILY SSF55874 207 326 9.97E-7 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS01370 4f39955949e664b49e9f5baba84a54c4 335 SMART SM00091 12 79 1.8E-7 T 05-07-2017 IPR000014 PAS domain AC028_RS07225 3fc8fc43e52dda06e495f7f1445510ab 247 Pfam PF04264 YceI-like domain 69 231 3.2E-44 T 05-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AC028_RS07225 3fc8fc43e52dda06e495f7f1445510ab 247 SMART SM00867 68 232 3.0E-70 T 05-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AC028_RS07225 3fc8fc43e52dda06e495f7f1445510ab 247 SUPERFAMILY SSF101874 66 233 2.35E-54 T 05-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AC028_RS07225 3fc8fc43e52dda06e495f7f1445510ab 247 Gene3D G3DSA:2.40.128.110 67 237 6.4E-59 T 05-07-2017 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AC028_RS17220 1e14b5f10e56146a0ea33e67ecff4d17 208 Pfam PF01865 Protein of unknown function DUF47 60 203 4.2E-5 T 05-07-2017 IPR018445 Putative phosphate transport regulator AC028_RS03235 59f92495e572e2de64286251e6f9eb57 733 SUPERFAMILY SSF101967 110 215 7.98E-11 T 05-07-2017 AC028_RS03235 59f92495e572e2de64286251e6f9eb57 733 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 663 686 5.3E-9 T 05-07-2017 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AC028_RS03235 59f92495e572e2de64286251e6f9eb57 733 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 467 487 4.7E-9 T 05-07-2017 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 AC028_RS03235 59f92495e572e2de64286251e6f9eb57 733 SUPERFAMILY SSF101967 216 333 3.92E-14 T 05-07-2017 AC028_RS03235 59f92495e572e2de64286251e6f9eb57 733 SUPERFAMILY SSF101967 302 490 4.45E-28 T 05-07-2017 AC028_RS03235 59f92495e572e2de64286251e6f9eb57 733 SUPERFAMILY SSF101967 513 688 7.72E-29 T 05-07-2017 AC028_RS03235 59f92495e572e2de64286251e6f9eb57 733 Gene3D G3DSA:2.150.10.10 90 186 1.5E-8 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS03235 59f92495e572e2de64286251e6f9eb57 733 Gene3D G3DSA:2.150.10.10 511 688 3.7E-34 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS03235 59f92495e572e2de64286251e6f9eb57 733 Gene3D G3DSA:2.150.10.10 301 490 1.9E-35 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS03235 59f92495e572e2de64286251e6f9eb57 733 Gene3D G3DSA:2.150.10.10 187 298 5.0E-16 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS03235 59f92495e572e2de64286251e6f9eb57 733 Pfam PF05658 Head domain of trimeric autotransporter adhesin 307 333 3.5E-4 T 05-07-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 AC028_RS03235 59f92495e572e2de64286251e6f9eb57 733 Pfam PF05658 Head domain of trimeric autotransporter adhesin 146 166 1.3E-4 T 05-07-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 AC028_RS03235 59f92495e572e2de64286251e6f9eb57 733 Pfam PF05658 Head domain of trimeric autotransporter adhesin 585 611 4.7E-7 T 05-07-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 AC028_RS03235 59f92495e572e2de64286251e6f9eb57 733 Pfam PF05658 Head domain of trimeric autotransporter adhesin 600 627 4.8E-4 T 05-07-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 AC028_RS03235 59f92495e572e2de64286251e6f9eb57 733 Pfam PF05658 Head domain of trimeric autotransporter adhesin 368 394 2.4E-7 T 05-07-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 AC028_RS03235 59f92495e572e2de64286251e6f9eb57 733 Pfam PF05658 Head domain of trimeric autotransporter adhesin 616 641 3.2E-5 T 05-07-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 AC028_RS03235 59f92495e572e2de64286251e6f9eb57 733 Pfam PF05658 Head domain of trimeric autotransporter adhesin 217 241 3.3E-5 T 05-07-2017 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 AC028_RS10405 cc4f9c423b901e95b83d0e48d9214928 191 SUPERFAMILY SSF51316 3 190 2.72E-53 T 05-07-2017 IPR011057 Mss4-like AC028_RS10405 cc4f9c423b901e95b83d0e48d9214928 191 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 49 115 3.4E-10 T 05-07-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AC028_RS10405 cc4f9c423b901e95b83d0e48d9214928 191 TIGRFAM TIGR02820 formald_GSH: S-(hydroxymethyl)glutathione synthase 6 187 7.7E-103 T 05-07-2017 IPR014185 Glutathione-dependent formaldehyde-activating enzyme GO:0008270|GO:0046294|GO:0051907 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AC028_RS10405 cc4f9c423b901e95b83d0e48d9214928 191 PIRSF PIRSF033318 2 191 2.5E-106 T 05-07-2017 IPR014185 Glutathione-dependent formaldehyde-activating enzyme GO:0008270|GO:0046294|GO:0051907 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AC028_RS10405 cc4f9c423b901e95b83d0e48d9214928 191 Gene3D G3DSA:3.90.1590.10 2 190 8.6E-56 T 05-07-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AC028_RS10405 cc4f9c423b901e95b83d0e48d9214928 191 Hamap MF_00723 Glutathione-dependent formaldehyde-activating enzyme [gfa]. 1 191 126.235 T 05-07-2017 IPR014185 Glutathione-dependent formaldehyde-activating enzyme GO:0008270|GO:0046294|GO:0051907 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AC028_RS20180 42588621e332a93ede7217da1c9475dc 300 Pfam PF01551 Peptidase family M23 197 292 5.9E-29 T 05-07-2017 IPR016047 Peptidase M23 AC028_RS20180 42588621e332a93ede7217da1c9475dc 300 SUPERFAMILY SSF51261 68 296 3.79E-55 T 05-07-2017 IPR011055 Duplicated hybrid motif AC028_RS20180 42588621e332a93ede7217da1c9475dc 300 Gene3D G3DSA:2.70.70.10 148 297 4.0E-45 T 05-07-2017 AC028_RS02930 e37753eaef43217c915df066b24f6f8f 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 8 305 1.1E-123 T 05-07-2017 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AC028_RS02930 e37753eaef43217c915df066b24f6f8f 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 10 296 4.1E-70 T 05-07-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AC028_RS02930 e37753eaef43217c915df066b24f6f8f 306 PIRSF PIRSF026649 6 305 2.4E-92 T 05-07-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AC028_RS02930 e37753eaef43217c915df066b24f6f8f 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 305 42.161 T 05-07-2017 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AC028_RS02815 183a4cfbafa619d149999a7e3837f65f 947 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 163 4.1E-24 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS02815 183a4cfbafa619d149999a7e3837f65f 947 Gene3D G3DSA:2.40.170.20 374 437 2.3E-95 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02815 183a4cfbafa619d149999a7e3837f65f 947 Gene3D G3DSA:2.40.170.20 489 624 2.3E-95 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02815 183a4cfbafa619d149999a7e3837f65f 947 Gene3D G3DSA:2.40.170.20 300 340 2.3E-95 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02815 183a4cfbafa619d149999a7e3837f65f 947 Gene3D G3DSA:2.40.170.20 660 947 2.3E-95 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02815 183a4cfbafa619d149999a7e3837f65f 947 Gene3D G3DSA:2.40.170.20 167 235 2.3E-95 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS02815 183a4cfbafa619d149999a7e3837f65f 947 SUPERFAMILY SSF56935 487 636 5.5E-102 T 05-07-2017 AC028_RS02815 183a4cfbafa619d149999a7e3837f65f 947 SUPERFAMILY SSF56935 676 947 5.5E-102 T 05-07-2017 AC028_RS02815 183a4cfbafa619d149999a7e3837f65f 947 SUPERFAMILY SSF56935 301 436 5.5E-102 T 05-07-2017 AC028_RS02815 183a4cfbafa619d149999a7e3837f65f 947 SUPERFAMILY SSF56935 36 228 5.5E-102 T 05-07-2017 AC028_RS02815 183a4cfbafa619d149999a7e3837f65f 947 Gene3D G3DSA:2.170.130.10 26 166 2.2E-33 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS02815 183a4cfbafa619d149999a7e3837f65f 947 Pfam PF00593 TonB dependent receptor 594 944 9.6E-35 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS17255 f066aaff2b2cd869828e343f2474df6d 276 SUPERFAMILY SSF51569 2 270 1.56E-106 T 05-07-2017 AC028_RS17255 f066aaff2b2cd869828e343f2474df6d 276 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 270 53.318 T 05-07-2017 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AC028_RS17255 f066aaff2b2cd869828e343f2474df6d 276 Pfam PF00793 DAHP synthetase I family 7 266 4.1E-67 T 05-07-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AC028_RS17255 f066aaff2b2cd869828e343f2474df6d 276 Gene3D G3DSA:3.20.20.70 12 269 1.1E-115 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS17255 f066aaff2b2cd869828e343f2474df6d 276 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 269 1.6E-129 T 05-07-2017 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AC028_RS06075 ba3b18f19e8c371f064458d33e1e2755 195 Gene3D G3DSA:3.40.50.360 3 185 4.4E-31 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS06075 ba3b18f19e8c371f064458d33e1e2755 195 SUPERFAMILY SSF52218 4 187 4.19E-32 T 05-07-2017 IPR029039 Flavoprotein-like domain AC028_RS06075 ba3b18f19e8c371f064458d33e1e2755 195 TIGRFAM TIGR03566 FMN_reduc_MsuE: FMN reductase 8 179 9.2E-75 T 05-07-2017 IPR019912 FMN reductase, MsuE-like KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 AC028_RS06075 ba3b18f19e8c371f064458d33e1e2755 195 Pfam PF03358 NADPH-dependent FMN reductase 8 151 2.5E-27 T 05-07-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AC028_RS12885 2932e430cacb678e523b21407205a03d 213 SUPERFAMILY SSF46894 145 212 3.74E-22 T 05-07-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AC028_RS12885 2932e430cacb678e523b21407205a03d 213 Gene3D G3DSA:3.40.50.2300 1 156 2.3E-41 T 05-07-2017 AC028_RS12885 2932e430cacb678e523b21407205a03d 213 Pfam PF00072 Response regulator receiver domain 4 115 1.1E-29 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS12885 2932e430cacb678e523b21407205a03d 213 SMART SM00421 150 207 1.0E-25 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS12885 2932e430cacb678e523b21407205a03d 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS12885 2932e430cacb678e523b21407205a03d 213 SUPERFAMILY SSF52172 1 133 2.56E-35 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS12885 2932e430cacb678e523b21407205a03d 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 2.1E-15 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS12885 2932e430cacb678e523b21407205a03d 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 2.1E-15 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS12885 2932e430cacb678e523b21407205a03d 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 2.1E-15 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS12885 2932e430cacb678e523b21407205a03d 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 1.6E-20 T 05-07-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AC028_RS12885 2932e430cacb678e523b21407205a03d 213 Gene3D G3DSA:1.10.10.10 157 212 6.4E-27 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS12885 2932e430cacb678e523b21407205a03d 213 SMART SM00448 2 115 6.1E-35 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS11185 542a3c17ca04edf2fd62ea9a4a429643 157 SUPERFAMILY SSF46785 5 140 5.86E-23 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS11185 542a3c17ca04edf2fd62ea9a4a429643 157 Pfam PF12802 MarR family 34 91 7.6E-9 T 05-07-2017 AC028_RS11185 542a3c17ca04edf2fd62ea9a4a429643 157 Gene3D G3DSA:1.10.10.10 5 139 4.5E-25 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS11185 542a3c17ca04edf2fd62ea9a4a429643 157 SMART SM00347 28 127 2.0E-11 T 05-07-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AC028_RS21260 e735945397aa4dcf9f4b7750fd576547 363 Pfam PF01757 Acyltransferase family 30 344 1.4E-25 T 05-07-2017 IPR002656 Acyltransferase 3 GO:0016747 AC028_RS06855 388885748cb8f7998829803af32fb710 220 Gene3D G3DSA:3.10.450.50 36 80 1.7E-20 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS06855 388885748cb8f7998829803af32fb710 220 Gene3D G3DSA:3.10.450.50 125 180 1.7E-20 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS06855 388885748cb8f7998829803af32fb710 220 Gene3D G3DSA:1.10.10.640 82 121 1.1E-8 T 05-07-2017 IPR023094 Toluene tolerance protein, alpha-helical AC028_RS06855 388885748cb8f7998829803af32fb710 220 Gene3D G3DSA:1.10.10.640 181 212 1.1E-8 T 05-07-2017 IPR023094 Toluene tolerance protein, alpha-helical AC028_RS06855 388885748cb8f7998829803af32fb710 220 PIRSF PIRSF004649 9 219 1.9E-57 T 05-07-2017 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AC028_RS06855 388885748cb8f7998829803af32fb710 220 Pfam PF05494 MlaC protein 45 206 1.4E-39 T 05-07-2017 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AC028_RS09315 9c90c89d2cfbcd1d6fc622687f5570c3 107 SUPERFAMILY SSF103473 7 105 8.37E-9 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS09315 9c90c89d2cfbcd1d6fc622687f5570c3 107 Gene3D G3DSA:1.20.1250.20 7 97 9.9E-5 T 05-07-2017 AC028_RS15445 96765f740fdc4c9736066f35a218101a 258 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 15 242 3.9E-84 T 05-07-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AC028_RS15445 96765f740fdc4c9736066f35a218101a 258 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 15 243 39.26 T 05-07-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AC028_RS15445 96765f740fdc4c9736066f35a218101a 258 Gene3D G3DSA:3.40.1180.10 11 250 1.6E-95 T 05-07-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AC028_RS15445 96765f740fdc4c9736066f35a218101a 258 Pfam PF01255 Putative undecaprenyl diphosphate synthase 22 242 5.3E-75 T 05-07-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AC028_RS15445 96765f740fdc4c9736066f35a218101a 258 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 188 205 - T 05-07-2017 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 AC028_RS15445 96765f740fdc4c9736066f35a218101a 258 SUPERFAMILY SSF64005 13 238 2.88E-82 T 05-07-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AC028_RS03890 c52574b2fff749c682ae176f5d96095d 250 Pfam PF01048 Phosphorylase superfamily 8 242 5.1E-39 T 05-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AC028_RS03890 c52574b2fff749c682ae176f5d96095d 250 SUPERFAMILY SSF53167 7 248 2.08E-73 T 05-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AC028_RS03890 c52574b2fff749c682ae176f5d96095d 250 Gene3D G3DSA:3.40.50.1580 5 247 3.4E-73 T 05-07-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AC028_RS03890 c52574b2fff749c682ae176f5d96095d 250 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 6 250 33.144 T 05-07-2017 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112 AC028_RS03890 c52574b2fff749c682ae176f5d96095d 250 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 54 94 - T 05-07-2017 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 AC028_RS16675 c409d664378fcb7e27de3d4b882c8ccc 709 Pfam PF13515 Fusaric acid resistance protein-like 384 507 2.5E-16 T 05-07-2017 AC028_RS16675 c409d664378fcb7e27de3d4b882c8ccc 709 Pfam PF12805 FUSC-like inner membrane protein yccS 68 178 6.0E-6 T 05-07-2017 IPR032692 Integral membrane protein YccS, N-terminal AC028_RS00955 eb49a374c101770e3f90d07b99cc1372 117 Pfam PF06993 Protein of unknown function (DUF1304) 11 114 3.2E-39 T 05-07-2017 IPR009732 Protein of unknown function DUF1304 AC028_RS08745 ccfad3f1633b210a57050060b8548ae8 305 Pfam PF08668 HDOD domain 50 235 1.3E-30 T 05-07-2017 IPR013976 Metal-dependent hydrolase HDOD AC028_RS08745 ccfad3f1633b210a57050060b8548ae8 305 SUPERFAMILY SSF109604 48 291 1.0E-37 T 05-07-2017 AC028_RS08745 ccfad3f1633b210a57050060b8548ae8 305 Gene3D G3DSA:1.10.3150.10 47 286 1.1E-41 T 05-07-2017 IPR013976 Metal-dependent hydrolase HDOD AC028_RS02350 6af9ec896bba62886c81050b1daeb706 628 Gene3D G3DSA:3.40.810.20 384 493 3.1E-7 T 05-07-2017 AC028_RS02350 6af9ec896bba62886c81050b1daeb706 628 SUPERFAMILY SSF100950 200 244 6.98E-41 T 05-07-2017 AC028_RS02350 6af9ec896bba62886c81050b1daeb706 628 SUPERFAMILY SSF100950 277 526 6.98E-41 T 05-07-2017 AC028_RS02350 6af9ec896bba62886c81050b1daeb706 628 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 342 506 3.7E-38 T 05-07-2017 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain AC028_RS02350 6af9ec896bba62886c81050b1daeb706 628 Gene3D G3DSA:3.30.750.70 280 355 5.3E-32 T 05-07-2017 AC028_RS02350 6af9ec896bba62886c81050b1daeb706 628 Gene3D G3DSA:3.30.750.70 200 245 5.3E-32 T 05-07-2017 AC028_RS12890 792e376bd478f0e40b92487155bd5564 388 SUPERFAMILY SSF55961 26 181 1.61E-8 T 05-07-2017 AC028_RS12890 792e376bd478f0e40b92487155bd5564 388 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 30 178 4.8E-6 T 05-07-2017 IPR019587 Polyketide cyclase/dehydrase AC028_RS09725 81fdda2bb490109318426ea30692e09b 256 SUPERFAMILY SSF117396 11 253 1.16E-68 T 05-07-2017 IPR002763 Protein of unknown function DUF72 AC028_RS09725 81fdda2bb490109318426ea30692e09b 256 Pfam PF01904 Protein of unknown function DUF72 35 250 1.3E-49 T 05-07-2017 IPR002763 Protein of unknown function DUF72 AC028_RS09725 81fdda2bb490109318426ea30692e09b 256 Gene3D G3DSA:3.20.20.410 10 253 2.1E-67 T 05-07-2017 IPR002763 Protein of unknown function DUF72 AC028_RS12830 75778c920ed7dbc642f3fd7c9b42e5a7 254 Pfam PF01569 PAP2 superfamily 109 238 3.6E-9 T 05-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AC028_RS12830 75778c920ed7dbc642f3fd7c9b42e5a7 254 SUPERFAMILY SSF48317 29 242 1.11E-11 T 05-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AC028_RS14875 4b728e01608e15f328ed7b00dc11234a 399 Pfam PF02687 FtsX-like permease family 278 388 2.6E-18 T 05-07-2017 IPR003838 ABC transporter permease protein domain GO:0016020 AC028_RS14875 4b728e01608e15f328ed7b00dc11234a 399 Pfam PF12704 MacB-like periplasmic core domain 19 224 1.8E-13 T 05-07-2017 IPR025857 MacB-like periplasmic core domain AC028_RS10975 13f9d81660f5582e333cce4de2078448 296 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 6 277 7.8E-75 T 05-07-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AC028_RS10975 13f9d81660f5582e333cce4de2078448 296 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 280 19.699 T 05-07-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AC028_RS10975 13f9d81660f5582e333cce4de2078448 296 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 139 151 - T 05-07-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AC028_RS10975 13f9d81660f5582e333cce4de2078448 296 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 274 1.7E-76 T 05-07-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AC028_RS20910 9a3b25210fea5afe7aa81d9a3f9a2de0 210 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 42.04 T 05-07-2017 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AC028_RS20910 9a3b25210fea5afe7aa81d9a3f9a2de0 210 Gene3D G3DSA:3.40.50.2020 2 207 2.2E-71 T 05-07-2017 IPR029057 Phosphoribosyltransferase-like AC028_RS20910 9a3b25210fea5afe7aa81d9a3f9a2de0 210 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 8.5E-63 T 05-07-2017 IPR029057 Phosphoribosyltransferase-like AC028_RS20910 9a3b25210fea5afe7aa81d9a3f9a2de0 210 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 207 3.9E-80 T 05-07-2017 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AC028_RS20910 9a3b25210fea5afe7aa81d9a3f9a2de0 210 SUPERFAMILY SSF53271 4 206 8.65E-63 T 05-07-2017 IPR029057 Phosphoribosyltransferase-like AC028_RS18535 d2136f39e7ba836ff92c4adfe5fa73a1 345 Gene3D G3DSA:3.40.47.10 221 336 5.6E-40 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS18535 d2136f39e7ba836ff92c4adfe5fa73a1 345 Gene3D G3DSA:3.40.47.10 162 184 5.6E-40 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS18535 d2136f39e7ba836ff92c4adfe5fa73a1 345 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 114 184 9.7E-10 T 05-07-2017 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AC028_RS18535 d2136f39e7ba836ff92c4adfe5fa73a1 345 SUPERFAMILY SSF53901 4 334 1.55E-43 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS18535 d2136f39e7ba836ff92c4adfe5fa73a1 345 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 245 333 2.1E-25 T 05-07-2017 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AC028_RS18535 d2136f39e7ba836ff92c4adfe5fa73a1 345 Gene3D G3DSA:3.40.47.10 7 161 5.7E-32 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS17820 6f1c301feb893afb618d30a260b98063 244 SUPERFAMILY SSF51366 3 243 1.33E-61 T 05-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AC028_RS17820 6f1c301feb893afb618d30a260b98063 244 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 5 240 3.8E-74 T 05-07-2017 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AC028_RS17820 6f1c301feb893afb618d30a260b98063 244 Pfam PF00977 Histidine biosynthesis protein 5 236 1.6E-69 T 05-07-2017 IPR006062 Histidine biosynthesis GO:0000105 AC028_RS17820 6f1c301feb893afb618d30a260b98063 244 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 4 244 31.702 T 05-07-2017 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AC028_RS17820 6f1c301feb893afb618d30a260b98063 244 Gene3D G3DSA:3.20.20.70 4 243 3.1E-70 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS00400 38ae40679ab987566355dc781c8449cc 90 Pfam PF04226 Transglycosylase associated protein 40 86 3.6E-11 T 05-07-2017 IPR007341 Transglycosylase-associated protein GO:0016021 AC028_RS00400 38ae40679ab987566355dc781c8449cc 90 Gene3D G3DSA:1.10.3470.10 13 83 1.5E-4 T 05-07-2017 IPR029022 ABC transporter, BtuC-like AC028_RS12325 04ebb28abf5df4a781fc9caca3b460a9 117 Pfam PF07238 PilZ domain 15 104 9.7E-10 T 05-07-2017 IPR009875 PilZ domain GO:0035438 AC028_RS10360 178769261292a61f3087ac465424182e 278 Gene3D G3DSA:1.10.10.60 229 273 2.1E-9 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS10360 178769261292a61f3087ac465424182e 278 SMART SM00342 193 275 1.2E-11 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS10360 178769261292a61f3087ac465424182e 278 Pfam PF12833 Helix-turn-helix domain 201 272 9.0E-12 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS10360 178769261292a61f3087ac465424182e 278 SUPERFAMILY SSF46689 229 273 4.4E-8 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS10360 178769261292a61f3087ac465424182e 278 Gene3D G3DSA:2.60.120.10 35 90 9.8E-4 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS05650 9c4cbd3126419a97a65d2e06c19b1a6d 115 Gene3D G3DSA:3.10.180.10 5 113 2.2E-24 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS05650 9c4cbd3126419a97a65d2e06c19b1a6d 115 SUPERFAMILY SSF54593 7 114 9.4E-23 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS05650 9c4cbd3126419a97a65d2e06c19b1a6d 115 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 109 1.4E-5 T 05-07-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AC028_RS15380 b003debef1c0f1b1cca2ee7df7bd90bc 251 Gene3D G3DSA:1.25.40.10 88 229 9.8E-16 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS15380 b003debef1c0f1b1cca2ee7df7bd90bc 251 Pfam PF14559 Tetratricopeptide repeat 98 165 5.7E-10 T 05-07-2017 AC028_RS15380 b003debef1c0f1b1cca2ee7df7bd90bc 251 PIRSF PIRSF030959 2 248 1.1E-115 T 05-07-2017 IPR014562 Uncharacterised conserved protein UCP030959, divergent TPR repeat-containing AC028_RS15380 b003debef1c0f1b1cca2ee7df7bd90bc 251 SUPERFAMILY SSF48452 88 220 3.8E-13 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS13645 4eba76603063de01e6929c17567f301d 526 Gene3D G3DSA:3.40.30.10 70 160 1.1E-22 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS13645 4eba76603063de01e6929c17567f301d 526 SUPERFAMILY SSF52833 45 161 1.95E-22 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS13645 4eba76603063de01e6929c17567f301d 526 Pfam PF13899 Thioredoxin-like 54 134 4.1E-15 T 05-07-2017 AC028_RS13645 4eba76603063de01e6929c17567f301d 526 Gene3D G3DSA:3.40.30.10 11 69 4.0E-5 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS05895 dcbc4e06d4e074bebeb1884bbef78172 131 Gene3D G3DSA:3.10.450.50 7 127 2.6E-53 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS05895 dcbc4e06d4e074bebeb1884bbef78172 131 Pfam PF11533 Protein of unknown function (DUF3225) 7 127 1.1E-53 T 05-07-2017 IPR024507 Protein of unknown function DUF3225 AC028_RS05895 dcbc4e06d4e074bebeb1884bbef78172 131 SUPERFAMILY SSF54427 7 126 1.55E-34 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS11390 cdca348894c97814197adc1f2a7024d6 101 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 8 90 9.2E-29 T 05-07-2017 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AC028_RS06215 ef5fa41b8adf6d847e1c5ce425e7299f 273 SUPERFAMILY SSF81338 5 253 7.85E-64 T 05-07-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AC028_RS06215 ef5fa41b8adf6d847e1c5ce425e7299f 273 Gene3D G3DSA:1.20.1080.10 2 252 1.3E-74 T 05-07-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AC028_RS06215 ef5fa41b8adf6d847e1c5ce425e7299f 273 ProSitePatterns PS00221 MIP family signature. 67 75 - T 05-07-2017 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AC028_RS06215 ef5fa41b8adf6d847e1c5ce425e7299f 273 PRINTS PR00783 Major intrinsic protein family signature 183 205 8.2E-42 T 05-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AC028_RS06215 ef5fa41b8adf6d847e1c5ce425e7299f 273 PRINTS PR00783 Major intrinsic protein family signature 49 73 8.2E-42 T 05-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AC028_RS06215 ef5fa41b8adf6d847e1c5ce425e7299f 273 PRINTS PR00783 Major intrinsic protein family signature 86 105 8.2E-42 T 05-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AC028_RS06215 ef5fa41b8adf6d847e1c5ce425e7299f 273 PRINTS PR00783 Major intrinsic protein family signature 149 167 8.2E-42 T 05-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AC028_RS06215 ef5fa41b8adf6d847e1c5ce425e7299f 273 PRINTS PR00783 Major intrinsic protein family signature 231 251 8.2E-42 T 05-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AC028_RS06215 ef5fa41b8adf6d847e1c5ce425e7299f 273 PRINTS PR00783 Major intrinsic protein family signature 7 26 8.2E-42 T 05-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AC028_RS06215 ef5fa41b8adf6d847e1c5ce425e7299f 273 Pfam PF00230 Major intrinsic protein 4 248 1.9E-49 T 05-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AC028_RS06215 ef5fa41b8adf6d847e1c5ce425e7299f 273 TIGRFAM TIGR00861 MIP: MIP family channel proteins 14 248 6.1E-60 T 05-07-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AC028_RS04870 b279fc24ef08aacfa6e1fabc0a9db26b 347 Pfam PF06812 ImpA, N-terminal, type VI secretion system 11 134 2.2E-34 T 05-07-2017 IPR010657 ImpA, N-terminal AC028_RS04870 b279fc24ef08aacfa6e1fabc0a9db26b 347 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 6 342 1.6E-98 T 05-07-2017 IPR017740 Type VI secretion system-associated, ImpA AC028_RS12390 6151c1fd1e697d138d49121b75023d21 995 SUPERFAMILY SSF56935 348 472 1.8E-78 T 05-07-2017 AC028_RS12390 6151c1fd1e697d138d49121b75023d21 995 SUPERFAMILY SSF56935 86 307 1.8E-78 T 05-07-2017 AC028_RS12390 6151c1fd1e697d138d49121b75023d21 995 SUPERFAMILY SSF56935 754 992 1.8E-78 T 05-07-2017 AC028_RS12390 6151c1fd1e697d138d49121b75023d21 995 SUPERFAMILY SSF56935 612 727 1.8E-78 T 05-07-2017 AC028_RS12390 6151c1fd1e697d138d49121b75023d21 995 SUPERFAMILY SSF56935 505 568 1.8E-78 T 05-07-2017 AC028_RS12390 6151c1fd1e697d138d49121b75023d21 995 Pfam PF07715 TonB-dependent Receptor Plug Domain 115 233 2.5E-14 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS12390 6151c1fd1e697d138d49121b75023d21 995 Gene3D G3DSA:2.170.130.10 115 236 1.1E-15 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS12390 6151c1fd1e697d138d49121b75023d21 995 Pfam PF00593 TonB dependent receptor 698 992 2.0E-26 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS12390 6151c1fd1e697d138d49121b75023d21 995 Gene3D G3DSA:2.40.170.20 237 456 5.7E-56 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS12390 6151c1fd1e697d138d49121b75023d21 995 Gene3D G3DSA:2.40.170.20 503 575 5.7E-56 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS12390 6151c1fd1e697d138d49121b75023d21 995 Gene3D G3DSA:2.40.170.20 620 992 5.7E-56 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS12390 6151c1fd1e697d138d49121b75023d21 995 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 96 992 1.0E-211 T 05-07-2017 IPR010104 Bacterial TonB-dependent receptor AC028_RS07865 28b2ff3e33c756d11d9e0d892bd0c190 210 Pfam PF13460 NAD(P)H-binding 7 151 6.3E-8 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS07865 28b2ff3e33c756d11d9e0d892bd0c190 210 Gene3D G3DSA:3.40.50.720 1 208 1.2E-44 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS07865 28b2ff3e33c756d11d9e0d892bd0c190 210 SUPERFAMILY SSF51735 1 200 2.45E-38 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS05080 031d89edf73b93ce8a2df4c9df37899c 243 Gene3D G3DSA:3.60.110.10 1 231 2.6E-36 T 05-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AC028_RS05080 031d89edf73b93ce8a2df4c9df37899c 243 Pfam PF00795 Carbon-nitrogen hydrolase 3 228 1.5E-21 T 05-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AC028_RS05080 031d89edf73b93ce8a2df4c9df37899c 243 SUPERFAMILY SSF56317 1 232 7.46E-40 T 05-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AC028_RS19355 adf98005415b8fb80a22545f72440208 351 Pfam PF11740 Plasmid replication region DNA-binding N-term 8 119 9.9E-24 T 05-07-2017 IPR021104 KfrA, N-terminal DNA-binding domain AC028_RS21660 79576c373a3b35898225f1a689b42d33 290 Pfam PF11231 Protein of unknown function (DUF3034) 33 287 3.7E-108 T 05-07-2017 IPR021393 Protein of unknown function DUF3034 AC028_RS12015 c6b0743a43710cd0df7ab0df35c6a3f0 102 PRINTS PR00160 Glutaredoxin signature 16 34 2.9E-11 T 05-07-2017 IPR014025 Glutaredoxin subgroup AC028_RS12015 c6b0743a43710cd0df7ab0df35c6a3f0 102 PRINTS PR00160 Glutaredoxin signature 58 71 2.9E-11 T 05-07-2017 IPR014025 Glutaredoxin subgroup AC028_RS12015 c6b0743a43710cd0df7ab0df35c6a3f0 102 PRINTS PR00160 Glutaredoxin signature 72 85 2.9E-11 T 05-07-2017 IPR014025 Glutaredoxin subgroup AC028_RS12015 c6b0743a43710cd0df7ab0df35c6a3f0 102 SUPERFAMILY SSF52833 8 95 9.63E-27 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS12015 c6b0743a43710cd0df7ab0df35c6a3f0 102 Gene3D G3DSA:3.40.30.10 14 95 1.1E-24 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS12015 c6b0743a43710cd0df7ab0df35c6a3f0 102 Pfam PF00462 Glutaredoxin 16 75 3.5E-17 T 05-07-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AC028_RS12015 c6b0743a43710cd0df7ab0df35c6a3f0 102 ProSitePatterns PS00195 Glutaredoxin active site. 18 34 - T 05-07-2017 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AC028_RS12015 c6b0743a43710cd0df7ab0df35c6a3f0 102 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 16 94 2.0E-33 T 05-07-2017 IPR011900 Glutaredoxin, GrxC GO:0045454 AC028_RS20395 463fc9079fa08b1d9a1c32f6f9ffb0f9 324 Pfam PF01963 TraB family 50 313 1.4E-79 T 05-07-2017 IPR002816 Pheromone shutdown, TraB AC028_RS06460 b1a5fe92da7a6255c559dcc10c630fca 1011 Gene3D G3DSA:2.60.40.10 48 89 4.7E-4 T 05-07-2017 IPR013783 Immunoglobulin-like fold AC028_RS06460 b1a5fe92da7a6255c559dcc10c630fca 1011 Gene3D G3DSA:2.40.170.20 548 579 3.1E-46 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS06460 b1a5fe92da7a6255c559dcc10c630fca 1011 Gene3D G3DSA:2.40.170.20 734 1011 3.1E-46 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS06460 b1a5fe92da7a6255c559dcc10c630fca 1011 Gene3D G3DSA:2.40.170.20 250 516 3.1E-46 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS06460 b1a5fe92da7a6255c559dcc10c630fca 1011 Gene3D G3DSA:2.40.170.20 631 690 3.1E-46 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS06460 b1a5fe92da7a6255c559dcc10c630fca 1011 Gene3D G3DSA:2.170.130.10 112 249 5.4E-6 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS06460 b1a5fe92da7a6255c559dcc10c630fca 1011 SUPERFAMILY SSF49452 31 105 7.65E-8 T 05-07-2017 IPR013784 Carbohydrate-binding-like fold GO:0030246 AC028_RS06460 b1a5fe92da7a6255c559dcc10c630fca 1011 SUPERFAMILY SSF56935 729 903 6.59E-62 T 05-07-2017 AC028_RS06460 b1a5fe92da7a6255c559dcc10c630fca 1011 SUPERFAMILY SSF56935 111 589 6.59E-62 T 05-07-2017 AC028_RS06460 b1a5fe92da7a6255c559dcc10c630fca 1011 SUPERFAMILY SSF56935 628 668 6.59E-62 T 05-07-2017 AC028_RS06460 b1a5fe92da7a6255c559dcc10c630fca 1011 SUPERFAMILY SSF56935 931 1011 6.59E-62 T 05-07-2017 AC028_RS16530 8a056eccd5a7da9babe67779e561434e 289 SUPERFAMILY SSF161098 27 275 2.9E-30 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS16530 8a056eccd5a7da9babe67779e561434e 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 279 2.0E-20 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS16530 8a056eccd5a7da9babe67779e561434e 289 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 19 284 1.3E-86 T 05-07-2017 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AC028_RS16530 8a056eccd5a7da9babe67779e561434e 289 Gene3D G3DSA:1.10.3720.10 23 283 4.0E-32 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS00555 49dfb9997d91337d25e454db37ebf7ce 338 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 326 4.6E-92 T 05-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AC028_RS00555 49dfb9997d91337d25e454db37ebf7ce 338 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 333 2.8E-42 T 05-07-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AC028_RS09120 85053578e7a5f2ba7e0ca84f06b11463 75 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 5.8E-23 T 05-07-2017 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AC028_RS09120 85053578e7a5f2ba7e0ca84f06b11463 75 Pfam PF02416 mttA/Hcf106 family 5 48 9.7E-15 T 05-07-2017 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AC028_RS09120 85053578e7a5f2ba7e0ca84f06b11463 75 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 69 21.868 T 05-07-2017 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AC028_RS14595 51848715c9b05e09676971b92e66a195 162 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 86 149 3.1E-11 T 05-07-2017 IPR018660 C-type lysozyme, inhibitor AC028_RS14595 51848715c9b05e09676971b92e66a195 162 SUPERFAMILY SSF141488 81 154 1.83E-16 T 05-07-2017 IPR018660 C-type lysozyme, inhibitor AC028_RS02970 8281b7634ab126521b23cce15e1edcf1 277 Pfam PF05598 Transposase domain (DUF772) 1 73 2.1E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS02970 8281b7634ab126521b23cce15e1edcf1 277 Pfam PF01609 Transposase DDE domain 86 261 5.1E-35 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS18510 5de7afe324683ac060dda906d66b2ae7 217 SUPERFAMILY SSF51161 4 209 2.36E-37 T 05-07-2017 IPR011004 Trimeric LpxA-like AC028_RS18510 5de7afe324683ac060dda906d66b2ae7 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 150 8.1E-7 T 05-07-2017 IPR001451 Hexapeptide repeat AC028_RS18510 5de7afe324683ac060dda906d66b2ae7 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 158 192 1.7E-6 T 05-07-2017 IPR001451 Hexapeptide repeat AC028_RS18510 5de7afe324683ac060dda906d66b2ae7 217 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 5 207 4.5E-51 T 05-07-2017 IPR020019 Sialic acid O-acyltransferase NeuD-like AC028_RS18510 5de7afe324683ac060dda906d66b2ae7 217 Gene3D G3DSA:3.40.50.20 4 85 3.7E-8 T 05-07-2017 IPR016185 Pre-ATP-grasp domain AC028_RS18510 5de7afe324683ac060dda906d66b2ae7 217 Gene3D G3DSA:2.160.10.10 86 209 1.7E-31 T 05-07-2017 AC028_RS20885 bfa9cd32fcf921544209f248e5037f63 498 Pfam PF00202 Aminotransferase class-III 84 486 2.0E-35 T 05-07-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AC028_RS20885 bfa9cd32fcf921544209f248e5037f63 498 Gene3D G3DSA:3.40.640.10 120 374 2.8E-34 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS20885 bfa9cd32fcf921544209f248e5037f63 498 SUPERFAMILY SSF53383 77 488 1.6E-54 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS20885 bfa9cd32fcf921544209f248e5037f63 498 Gene3D G3DSA:3.90.1150.10 375 488 9.3E-13 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS17765 b67bf89c36b74ff7f0035a0d24514657 104 Gene3D G3DSA:3.30.70.900 2 100 1.4E-44 T 05-07-2017 AC028_RS17765 b67bf89c36b74ff7f0035a0d24514657 104 Pfam PF07110 EthD domain 18 92 8.8E-8 T 05-07-2017 IPR009799 EthD domain AC028_RS17765 b67bf89c36b74ff7f0035a0d24514657 104 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 1 103 9.4E-37 T 05-07-2017 IPR009799 EthD domain AC028_RS17765 b67bf89c36b74ff7f0035a0d24514657 104 SUPERFAMILY SSF54909 1 102 2.49E-20 T 05-07-2017 IPR011008 Dimeric alpha-beta barrel AC028_RS21270 428f280be76340e7b56e2dd05c6a9ec0 484 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 33 484 3.1E-156 T 05-07-2017 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 AC028_RS21270 428f280be76340e7b56e2dd05c6a9ec0 484 Pfam PF13727 CoA-binding domain 77 255 3.2E-32 T 05-07-2017 AC028_RS21270 428f280be76340e7b56e2dd05c6a9ec0 484 Pfam PF02397 Bacterial sugar transferase 293 478 5.4E-55 T 05-07-2017 IPR003362 Bacterial sugar transferase AC028_RS21270 428f280be76340e7b56e2dd05c6a9ec0 484 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 32 484 8.4E-147 T 05-07-2017 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AC028_RS21755 7867fcef1c50ee5783313c6257a8797e 280 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 8 280 46.525 T 05-07-2017 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 AC028_RS21755 7867fcef1c50ee5783313c6257a8797e 280 Pfam PF02666 Phosphatidylserine decarboxylase 61 277 2.1E-54 T 05-07-2017 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AC028_RS21755 7867fcef1c50ee5783313c6257a8797e 280 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 47 278 8.5E-61 T 05-07-2017 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AC028_RS12125 77ffe681855f150eaa8362b1f5c78aec 218 PIRSF PIRSF028445 1 218 2.4E-131 T 05-07-2017 IPR016885 Uncharacterised conserved protein UCP028445 AC028_RS12125 77ffe681855f150eaa8362b1f5c78aec 218 SUPERFAMILY SSF53335 77 172 5.28E-13 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS12125 77ffe681855f150eaa8362b1f5c78aec 218 Gene3D G3DSA:3.40.50.150 75 175 2.6E-6 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS14600 69977dc61b7282de309ebc51188a134b 154 Pfam PF01641 SelR domain 20 134 7.0E-47 T 05-07-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AC028_RS14600 69977dc61b7282de309ebc51188a134b 154 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 10 136 35.5 T 05-07-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AC028_RS14600 69977dc61b7282de309ebc51188a134b 154 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 16 136 2.9E-45 T 05-07-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AC028_RS14600 69977dc61b7282de309ebc51188a134b 154 SUPERFAMILY SSF51316 15 138 8.02E-53 T 05-07-2017 IPR011057 Mss4-like AC028_RS14600 69977dc61b7282de309ebc51188a134b 154 Gene3D G3DSA:2.170.150.20 11 138 3.6E-53 T 05-07-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AC028_RS03875 976f3965bcda9e85af0ee00cc81e948d 214 Pfam PF00149 Calcineurin-like phosphoesterase 29 126 2.6E-7 T 05-07-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AC028_RS03875 976f3965bcda9e85af0ee00cc81e948d 214 PIRSF PIRSF000887 7 210 4.3E-51 T 05-07-2017 IPR024173 Phosphoesterase, MJ0037 AC028_RS03875 976f3965bcda9e85af0ee00cc81e948d 214 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 8 207 1.7E-55 T 05-07-2017 IPR026336 Metallophosphoesterase, DNA ligase-associated AC028_RS03875 976f3965bcda9e85af0ee00cc81e948d 214 SUPERFAMILY SSF56300 28 158 1.1E-13 T 05-07-2017 IPR029052 Metallo-dependent phosphatase-like AC028_RS03875 976f3965bcda9e85af0ee00cc81e948d 214 Gene3D G3DSA:3.60.21.10 28 160 2.2E-12 T 05-07-2017 IPR029052 Metallo-dependent phosphatase-like AC028_RS00560 4d0ed10f3beb78992a44d7e722c2897d 465 PIRSF PIRSF006446 1 456 2.4E-179 T 05-07-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 AC028_RS00560 4d0ed10f3beb78992a44d7e722c2897d 465 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 434 1.4E-148 T 05-07-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 AC028_RS05335 36551500628027ea9c56863f00f018af 271 Pfam PF14302 Domain of unknown function (DUF4377) 188 268 9.2E-14 T 05-07-2017 IPR025485 Domain of unknown function DUF4377 AC028_RS05335 36551500628027ea9c56863f00f018af 271 Pfam PF03724 META domain 51 167 2.9E-15 T 05-07-2017 IPR005184 Domain of unknown function DUF306, Meta/HslJ AC028_RS06905 64dddb1bfd68d4c685432ed6c024e03a 471 Pfam PF13520 Amino acid permease 26 435 1.0E-52 T 05-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AC028_RS06905 64dddb1bfd68d4c685432ed6c024e03a 471 PIRSF PIRSF006060 6 468 1.4E-82 T 05-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AC028_RS07775 6cf2c3ec240d03936aa442d22b89b922 627 PIRSF PIRSF028304 1 627 5.3E-186 T 05-07-2017 IPR010272 Type VI secretion system, TssF-like AC028_RS07775 6cf2c3ec240d03936aa442d22b89b922 627 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 625 1.8E-210 T 05-07-2017 IPR010272 Type VI secretion system, TssF-like AC028_RS07775 6cf2c3ec240d03936aa442d22b89b922 627 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 6 625 3.0E-225 T 05-07-2017 IPR010272 Type VI secretion system, TssF-like AC028_RS06750 676b0b5efef8da0655b0259b1ad31ccd 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 5.3E-6 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06750 676b0b5efef8da0655b0259b1ad31ccd 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 5.3E-6 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06750 676b0b5efef8da0655b0259b1ad31ccd 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 5.3E-6 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06750 676b0b5efef8da0655b0259b1ad31ccd 247 Gene3D G3DSA:3.40.50.720 4 246 4.3E-79 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS06750 676b0b5efef8da0655b0259b1ad31ccd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.0E-38 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06750 676b0b5efef8da0655b0259b1ad31ccd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.0E-38 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06750 676b0b5efef8da0655b0259b1ad31ccd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.0E-38 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06750 676b0b5efef8da0655b0259b1ad31ccd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.0E-38 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06750 676b0b5efef8da0655b0259b1ad31ccd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.0E-38 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06750 676b0b5efef8da0655b0259b1ad31ccd 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.0E-38 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS06750 676b0b5efef8da0655b0259b1ad31ccd 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 244 1.6E-60 T 05-07-2017 AC028_RS06750 676b0b5efef8da0655b0259b1ad31ccd 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 182 3.3E-4 T 05-07-2017 AC028_RS06750 676b0b5efef8da0655b0259b1ad31ccd 247 SUPERFAMILY SSF51735 6 246 1.15E-75 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS03480 6a3a5274e5be742cfb8eef5a20cbf34c 199 Gene3D G3DSA:2.10.109.10 157 196 3.4E-8 T 05-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AC028_RS03480 6a3a5274e5be742cfb8eef5a20cbf34c 199 Gene3D G3DSA:2.10.109.10 66 119 3.4E-8 T 05-07-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain AC028_RS03480 6a3a5274e5be742cfb8eef5a20cbf34c 199 Pfam PF10502 Signal peptidase, peptidase S26 50 195 7.5E-50 T 05-07-2017 IPR019533 Peptidase S26 AC028_RS03480 6a3a5274e5be742cfb8eef5a20cbf34c 199 SUPERFAMILY SSF51306 72 194 1.62E-18 T 05-07-2017 IPR015927 Peptidase S24/S26A/S26B/S26C AC028_RS09520 54c5a597ff5c73512e5f64aa86215fbb 138 Gene3D G3DSA:1.10.530.10 15 115 1.0E-21 T 05-07-2017 AC028_RS09520 54c5a597ff5c73512e5f64aa86215fbb 138 Pfam PF01464 Transglycosylase SLT domain 17 113 3.8E-19 T 05-07-2017 IPR008258 Transglycosylase SLT domain 1 AC028_RS09520 54c5a597ff5c73512e5f64aa86215fbb 138 SUPERFAMILY SSF53955 7 133 1.29E-41 T 05-07-2017 IPR023346 Lysozyme-like domain AC028_RS03945 eb464e162a96d56a0d5a78c6145a1196 226 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 05-07-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AC028_RS03945 eb464e162a96d56a0d5a78c6145a1196 226 Gene3D G3DSA:3.30.160.20 153 222 4.6E-23 T 05-07-2017 IPR014720 Double-stranded RNA-binding domain AC028_RS03945 eb464e162a96d56a0d5a78c6145a1196 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 27.408 T 05-07-2017 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AC028_RS03945 eb464e162a96d56a0d5a78c6145a1196 226 SUPERFAMILY SSF69065 11 157 3.14E-43 T 05-07-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AC028_RS03945 eb464e162a96d56a0d5a78c6145a1196 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 12 221 1.4E-68 T 05-07-2017 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AC028_RS03945 eb464e162a96d56a0d5a78c6145a1196 226 Gene3D G3DSA:1.10.1520.10 12 141 3.5E-39 T 05-07-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AC028_RS03945 eb464e162a96d56a0d5a78c6145a1196 226 Pfam PF14622 Ribonuclease-III-like 18 138 9.8E-31 T 05-07-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AC028_RS03945 eb464e162a96d56a0d5a78c6145a1196 226 SUPERFAMILY SSF54768 108 222 8.01E-26 T 05-07-2017 AC028_RS03945 eb464e162a96d56a0d5a78c6145a1196 226 Pfam PF00035 Double-stranded RNA binding motif 155 222 1.9E-11 T 05-07-2017 IPR014720 Double-stranded RNA-binding domain AC028_RS03945 eb464e162a96d56a0d5a78c6145a1196 226 SMART SM00535 20 148 1.6E-47 T 05-07-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AC028_RS03945 eb464e162a96d56a0d5a78c6145a1196 226 SMART SM00358 155 223 8.5E-20 T 05-07-2017 IPR014720 Double-stranded RNA-binding domain AC028_RS11045 048c4252431f1af8437fbb2c3989ee41 486 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 13 442 3.6E-152 T 05-07-2017 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AC028_RS11045 048c4252431f1af8437fbb2c3989ee41 486 Pfam PF00296 Luciferase-like monooxygenase 25 339 9.7E-56 T 05-07-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AC028_RS11045 048c4252431f1af8437fbb2c3989ee41 486 PIRSF PIRSF000337 7 455 8.7E-131 T 05-07-2017 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AC028_RS11045 048c4252431f1af8437fbb2c3989ee41 486 Gene3D G3DSA:3.20.20.30 358 445 8.7E-126 T 05-07-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AC028_RS11045 048c4252431f1af8437fbb2c3989ee41 486 Gene3D G3DSA:3.20.20.30 7 320 8.7E-126 T 05-07-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AC028_RS11045 048c4252431f1af8437fbb2c3989ee41 486 SUPERFAMILY SSF51679 7 446 3.79E-113 T 05-07-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AC028_RS15185 9e11add41f5da1c812c61de638fc652f 328 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 26 312 1.9E-38 T 05-07-2017 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD AC028_RS15185 9e11add41f5da1c812c61de638fc652f 328 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 54 325 3.6E-16 T 05-07-2017 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD AC028_RS04635 c9915c6b616f180571bdd9e0e472b179 108 Pfam PF00085 Thioredoxin 5 104 4.1E-11 T 05-07-2017 IPR013766 Thioredoxin domain GO:0045454 AC028_RS04635 c9915c6b616f180571bdd9e0e472b179 108 Gene3D G3DSA:3.40.30.10 3 106 3.5E-16 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS04635 c9915c6b616f180571bdd9e0e472b179 108 SUPERFAMILY SSF52833 4 105 1.51E-17 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS19175 3a60480af35a451247e8e059cbd3d99d 220 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 188 1.1E-30 T 05-07-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AC028_RS00465 22d446aab86e5eb2f9f57ed1127ee515 424 Gene3D G3DSA:3.65.10.10 21 226 9.8E-69 T 05-07-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 AC028_RS00465 22d446aab86e5eb2f9f57ed1127ee515 424 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 413 6.9E-114 T 05-07-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 AC028_RS00465 22d446aab86e5eb2f9f57ed1127ee515 424 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 423 47.551 T 05-07-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS00465 22d446aab86e5eb2f9f57ed1127ee515 424 SUPERFAMILY SSF55205 1 422 1.8E-143 T 05-07-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AC028_RS00465 22d446aab86e5eb2f9f57ed1127ee515 424 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 422 9.5E-178 T 05-07-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AC028_RS00465 22d446aab86e5eb2f9f57ed1127ee515 424 Gene3D G3DSA:3.65.10.10 227 422 2.3E-60 T 05-07-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 AC028_RS18380 82423cd8558d17089fa33ff6eefc8e93 263 Pfam PF01311 Bacterial export proteins, family 1 20 253 1.1E-57 T 05-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AC028_RS18380 82423cd8558d17089fa33ff6eefc8e93 263 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 20 261 3.0E-58 T 05-07-2017 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 AC028_RS18380 82423cd8558d17089fa33ff6eefc8e93 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 187 209 3.3E-21 T 05-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AC028_RS18380 82423cd8558d17089fa33ff6eefc8e93 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 209 228 3.3E-21 T 05-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AC028_RS18380 82423cd8558d17089fa33ff6eefc8e93 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 86 105 3.3E-21 T 05-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AC028_RS18380 82423cd8558d17089fa33ff6eefc8e93 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 27 48 3.3E-21 T 05-07-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AC028_RS13700 55d219014760707f6c1160dd2a10cb58 111 Pfam PF05360 yiaA/B two helix domain 40 92 8.6E-21 T 05-07-2017 IPR008024 YiaAB two helix AC028_RS13700 55d219014760707f6c1160dd2a10cb58 111 Pfam PF05360 yiaA/B two helix domain 1 29 1.2E-9 T 05-07-2017 IPR008024 YiaAB two helix AC028_RS16590 ed7a56efe4f956e30a618d7053bd7c19 273 Gene3D G3DSA:3.90.79.10 109 268 2.0E-36 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS16590 ed7a56efe4f956e30a618d7053bd7c19 273 Pfam PF06945 Protein of unknown function (DUF1289) 21 62 5.6E-17 T 05-07-2017 IPR010710 Protein of unknown function DUF1289 AC028_RS16590 ed7a56efe4f956e30a618d7053bd7c19 273 Pfam PF00293 NUDIX domain 119 224 3.5E-12 T 05-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AC028_RS16590 ed7a56efe4f956e30a618d7053bd7c19 273 SUPERFAMILY SSF55811 113 262 1.44E-31 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS10555 60dc6c23729a7755dba4e98126e0fe1e 179 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 166 9.2E-27 T 05-07-2017 IPR007404 LexA-binding, inner membrane-associated putative hydrolase AC028_RS20745 5fa0685f4f34fa55df66f53423539fbf 434 Pfam PF04286 Protein of unknown function (DUF445) 55 431 1.3E-103 T 05-07-2017 IPR007383 Protein of unknown function DUF445 AC028_RS17460 ad4a3ff73f094f36908ad290d55f7024 160 Gene3D G3DSA:3.40.30.10 21 156 4.7E-43 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS17460 ad4a3ff73f094f36908ad290d55f7024 160 SUPERFAMILY SSF52833 14 157 1.22E-45 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS17460 ad4a3ff73f094f36908ad290d55f7024 160 Pfam PF00578 AhpC/TSA family 10 133 2.4E-32 T 05-07-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AC028_RS07760 dd3f72fc1c3e12a4e31553da8f4b9f82 167 Pfam PF05638 Type VI secretion system effector, Hcp 12 139 1.0E-26 T 05-07-2017 IPR008514 Type VI secretion system effector, Hcp AC028_RS07760 dd3f72fc1c3e12a4e31553da8f4b9f82 167 SUPERFAMILY SSF141452 2 162 2.22E-38 T 05-07-2017 IPR008514 Type VI secretion system effector, Hcp AC028_RS07760 dd3f72fc1c3e12a4e31553da8f4b9f82 167 Gene3D G3DSA:2.30.110.20 1 162 6.7E-45 T 05-07-2017 IPR008514 Type VI secretion system effector, Hcp AC028_RS10430 f64bfd8fe6dc6197f271288d8df4cda3 303 SUPERFAMILY SSF103481 195 294 6.02E-15 T 05-07-2017 AC028_RS10430 f64bfd8fe6dc6197f271288d8df4cda3 303 SUPERFAMILY SSF103481 46 145 7.45E-9 T 05-07-2017 AC028_RS10430 f64bfd8fe6dc6197f271288d8df4cda3 303 Pfam PF00892 EamA-like transporter family 161 290 6.7E-15 T 05-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AC028_RS10430 f64bfd8fe6dc6197f271288d8df4cda3 303 Pfam PF00892 EamA-like transporter family 19 144 3.8E-13 T 05-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AC028_RS05265 a04a1a78b78727dc39d6b69512ddf730 211 SUPERFAMILY SSF48452 63 193 9.99E-8 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS05265 a04a1a78b78727dc39d6b69512ddf730 211 Gene3D G3DSA:1.25.40.10 48 186 2.3E-6 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS18495 6183873e7ec0c0f275fcc3dc16c11134 265 Gene3D G3DSA:3.90.380.10 2 256 5.1E-15 T 05-07-2017 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AC028_RS18495 6183873e7ec0c0f275fcc3dc16c11134 265 SUPERFAMILY SSF55961 33 255 6.28E-26 T 05-07-2017 AC028_RS18495 6183873e7ec0c0f275fcc3dc16c11134 265 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 58 259 1.4E-14 T 05-07-2017 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AC028_RS08100 c499942895b6008a59bf9cdb56a65989 265 SUPERFAMILY SSF51366 12 262 4.47E-89 T 05-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AC028_RS08100 c499942895b6008a59bf9cdb56a65989 265 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 05-07-2017 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 AC028_RS08100 c499942895b6008a59bf9cdb56a65989 265 Gene3D G3DSA:3.20.20.70 1 263 4.5E-107 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS08100 c499942895b6008a59bf9cdb56a65989 265 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 36.092 T 05-07-2017 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AC028_RS08100 c499942895b6008a59bf9cdb56a65989 265 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 260 1.0E-94 T 05-07-2017 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AC028_RS16095 78706d494b9584acb0f21f7d174ada13 390 Gene3D G3DSA:2.40.160.10 19 390 1.4E-94 T 05-07-2017 IPR023614 Porin domain AC028_RS16095 78706d494b9584acb0f21f7d174ada13 390 Pfam PF07396 Phosphate-selective porin O and P 42 390 3.0E-96 T 05-07-2017 IPR010870 Phosphate-selective porin O/P AC028_RS16095 78706d494b9584acb0f21f7d174ada13 390 SUPERFAMILY SSF56935 108 160 5.49E-11 T 05-07-2017 AC028_RS16095 78706d494b9584acb0f21f7d174ada13 390 SUPERFAMILY SSF56935 202 387 5.49E-11 T 05-07-2017 AC028_RS17520 4f9d0fccf5c27f487d5bf4099cb10369 978 Gene3D G3DSA:2.40.170.20 679 964 9.6E-50 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS17520 4f9d0fccf5c27f487d5bf4099cb10369 978 Gene3D G3DSA:2.40.170.20 595 643 9.6E-50 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS17520 4f9d0fccf5c27f487d5bf4099cb10369 978 Gene3D G3DSA:2.40.170.20 195 344 9.6E-50 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS17520 4f9d0fccf5c27f487d5bf4099cb10369 978 Gene3D G3DSA:2.40.170.20 378 527 9.6E-50 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS17520 4f9d0fccf5c27f487d5bf4099cb10369 978 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 61 977 2.7E-209 T 05-07-2017 IPR010104 Bacterial TonB-dependent receptor AC028_RS17520 4f9d0fccf5c27f487d5bf4099cb10369 978 Gene3D G3DSA:2.170.130.10 81 194 1.5E-13 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS17520 4f9d0fccf5c27f487d5bf4099cb10369 978 Pfam PF00593 TonB dependent receptor 686 976 6.1E-34 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS17520 4f9d0fccf5c27f487d5bf4099cb10369 978 SUPERFAMILY SSF56935 463 531 2.25E-73 T 05-07-2017 AC028_RS17520 4f9d0fccf5c27f487d5bf4099cb10369 978 SUPERFAMILY SSF56935 605 966 2.25E-73 T 05-07-2017 AC028_RS17520 4f9d0fccf5c27f487d5bf4099cb10369 978 SUPERFAMILY SSF56935 64 257 2.25E-73 T 05-07-2017 AC028_RS17520 4f9d0fccf5c27f487d5bf4099cb10369 978 SUPERFAMILY SSF56935 293 333 2.25E-73 T 05-07-2017 AC028_RS17520 4f9d0fccf5c27f487d5bf4099cb10369 978 SUPERFAMILY SSF56935 372 424 2.25E-73 T 05-07-2017 AC028_RS17520 4f9d0fccf5c27f487d5bf4099cb10369 978 Pfam PF07715 TonB-dependent Receptor Plug Domain 82 190 1.1E-9 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS00095 de53e84d06c86ba85cbbbc57c9c7cada 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 145 165 5.5E-5 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS00095 de53e84d06c86ba85cbbbc57c9c7cada 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 5.5E-5 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS00095 de53e84d06c86ba85cbbbc57c9c7cada 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 95 108 5.5E-5 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS00095 de53e84d06c86ba85cbbbc57c9c7cada 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 127 143 5.5E-5 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS00095 de53e84d06c86ba85cbbbc57c9c7cada 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 52 182 1.1E-16 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS00095 de53e84d06c86ba85cbbbc57c9c7cada 225 SUPERFAMILY SSF56784 3 216 7.5E-48 T 05-07-2017 IPR023214 HAD-like domain AC028_RS00095 de53e84d06c86ba85cbbbc57c9c7cada 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 182 8.3E-24 T 05-07-2017 IPR023214 HAD-like domain AC028_RS00095 de53e84d06c86ba85cbbbc57c9c7cada 225 Gene3D G3DSA:3.40.50.1000 3 18 3.1E-38 T 05-07-2017 IPR023214 HAD-like domain AC028_RS00095 de53e84d06c86ba85cbbbc57c9c7cada 225 Gene3D G3DSA:3.40.50.1000 86 216 3.1E-38 T 05-07-2017 IPR023214 HAD-like domain AC028_RS00405 ab7945093d631d976cdd919ac6129433 339 Gene3D G3DSA:3.30.200.20 10 97 5.1E-24 T 05-07-2017 AC028_RS00405 ab7945093d631d976cdd919ac6129433 339 Pfam PF01636 Phosphotransferase enzyme family 30 249 5.3E-24 T 05-07-2017 IPR002575 Aminoglycoside phosphotransferase AC028_RS00405 ab7945093d631d976cdd919ac6129433 339 Gene3D G3DSA:3.90.1200.10 99 332 1.9E-61 T 05-07-2017 AC028_RS00405 ab7945093d631d976cdd919ac6129433 339 SUPERFAMILY SSF56112 17 307 5.25E-39 T 05-07-2017 IPR011009 Protein kinase-like domain AC028_RS11650 ba6e358bf3f043afa6ade55e87981f72 99 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 21.941 T 05-07-2017 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AC028_RS11650 ba6e358bf3f043afa6ade55e87981f72 99 SUPERFAMILY SSF54189 6 97 4.68E-28 T 05-07-2017 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11650 ba6e358bf3f043afa6ade55e87981f72 99 Gene3D G3DSA:3.30.70.330 6 97 9.9E-31 T 05-07-2017 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 AC028_RS11650 ba6e358bf3f043afa6ade55e87981f72 99 Pfam PF00276 Ribosomal protein L23 10 95 1.6E-28 T 05-07-2017 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AC028_RS12590 c98f27917d6d31f95531b8b30d498591 300 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 62 297 3.2E-60 T 05-07-2017 AC028_RS12590 c98f27917d6d31f95531b8b30d498591 300 Gene3D G3DSA:3.40.50.720 52 298 1.7E-82 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS12590 c98f27917d6d31f95531b8b30d498591 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 144 1.5E-33 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12590 c98f27917d6d31f95531b8b30d498591 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 261 281 1.5E-33 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12590 c98f27917d6d31f95531b8b30d498591 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 224 1.5E-33 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12590 c98f27917d6d31f95531b8b30d498591 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 243 1.5E-33 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12590 c98f27917d6d31f95531b8b30d498591 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 57 74 1.5E-33 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12590 c98f27917d6d31f95531b8b30d498591 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 195 1.5E-33 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12590 c98f27917d6d31f95531b8b30d498591 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 185 193 1.8E-9 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12590 c98f27917d6d31f95531b8b30d498591 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 205 224 1.8E-9 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12590 c98f27917d6d31f95531b8b30d498591 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 144 1.8E-9 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS12590 c98f27917d6d31f95531b8b30d498591 300 SUPERFAMILY SSF51735 54 298 1.82E-79 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS12590 c98f27917d6d31f95531b8b30d498591 300 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 192 220 - T 05-07-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AC028_RS11075 892e287a612404d2980881626c5a1ae0 127 SUPERFAMILY SSF110069 8 127 2.49E-46 T 05-07-2017 IPR007474 ApaG domain AC028_RS11075 892e287a612404d2980881626c5a1ae0 127 Gene3D G3DSA:2.60.40.1470 8 127 4.3E-45 T 05-07-2017 IPR007474 ApaG domain AC028_RS11075 892e287a612404d2980881626c5a1ae0 127 Pfam PF04379 Protein of unknown function (DUF525) 20 104 1.7E-34 T 05-07-2017 IPR007474 ApaG domain AC028_RS11075 892e287a612404d2980881626c5a1ae0 127 Hamap MF_00791 Protein ApaG [apaG]. 2 127 33.318 T 05-07-2017 IPR023065 Uncharacterised protein family ApaG AC028_RS20195 98ebb5ca236eaa0aec19337da632608f 271 Hamap MF_00601 Ethanolamine ammonia-lyase light chain [eutC]. 2 247 40.938 T 05-07-2017 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AC028_RS20195 98ebb5ca236eaa0aec19337da632608f 271 PIRSF PIRSF018982 2 257 1.6E-104 T 05-07-2017 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AC028_RS20195 98ebb5ca236eaa0aec19337da632608f 271 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 10 247 4.2E-95 T 05-07-2017 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AC028_RS14055 6295de7df172c94cb359c046dd42884e 377 SUPERFAMILY SSF142695 188 344 1.15E-47 T 05-07-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AC028_RS14055 6295de7df172c94cb359c046dd42884e 377 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 173 369 38.273 T 05-07-2017 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AC028_RS14055 6295de7df172c94cb359c046dd42884e 377 PIRSF PIRSF001259 23 377 2.5E-87 T 05-07-2017 AC028_RS14055 6295de7df172c94cb359c046dd42884e 377 Pfam PF00925 GTP cyclohydrolase II 178 342 5.2E-51 T 05-07-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AC028_RS20470 9a459d90c5ac266a4c5698c1bf4698e0 133 Gene3D G3DSA:4.10.430.10 83 110 1.2E-6 T 05-07-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AC028_RS20470 9a459d90c5ac266a4c5698c1bf4698e0 133 SMART SM00528 78 121 8.2E-18 T 05-07-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 AC028_RS20470 9a459d90c5ac266a4c5698c1bf4698e0 133 Pfam PF00816 H-NS histone family 17 111 1.5E-17 T 05-07-2017 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AC028_RS20470 9a459d90c5ac266a4c5698c1bf4698e0 133 SUPERFAMILY SSF81273 81 111 3.84E-6 T 05-07-2017 AC028_RS07330 f0ba2ec3529e301fec27f1f26de60025 333 SUPERFAMILY SSF51445 29 331 4.03E-76 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS07330 f0ba2ec3529e301fec27f1f26de60025 333 Gene3D G3DSA:3.20.20.80 11 325 1.2E-109 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS07330 f0ba2ec3529e301fec27f1f26de60025 333 Pfam PF07745 Glycosyl hydrolase family 53 31 333 7.5E-100 T 05-07-2017 IPR011683 Glycosyl hydrolase family 53 GO:0015926 AC028_RS08830 a1fc30f87d847912e254be7ed42cb073 215 SUPERFAMILY SSF53335 6 203 5.16E-21 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS08830 a1fc30f87d847912e254be7ed42cb073 215 Gene3D G3DSA:3.40.50.150 14 211 5.9E-10 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS08830 a1fc30f87d847912e254be7ed42cb073 215 Pfam PF06080 Protein of unknown function (DUF938) 3 210 2.8E-79 T 05-07-2017 IPR010342 Protein of unknown function DUF938 AC028_RS02935 d31a4f21499764e30f3a11705691ab6a 443 Pfam PF04932 O-Antigen ligase 221 372 1.3E-22 T 05-07-2017 IPR007016 O-antigen ligase-related AC028_RS20530 814f1265fee83fd3ae138028eece6f07 211 SUPERFAMILY SSF47616 82 207 2.56E-24 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS20530 814f1265fee83fd3ae138028eece6f07 211 Gene3D G3DSA:1.20.1050.10 101 207 1.5E-12 T 05-07-2017 IPR010987 Glutathione S-transferase, C-terminal-like AC028_RS20530 814f1265fee83fd3ae138028eece6f07 211 SUPERFAMILY SSF52833 10 111 3.12E-21 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS20530 814f1265fee83fd3ae138028eece6f07 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 193 1.0E-6 T 05-07-2017 IPR004046 Glutathione S-transferase, C-terminal AC028_RS20530 814f1265fee83fd3ae138028eece6f07 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.6E-12 T 05-07-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AC028_RS20530 814f1265fee83fd3ae138028eece6f07 211 Gene3D G3DSA:3.40.30.10 7 100 7.1E-27 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS00305 1f315021e637be886eacf41f8cb3e564 155 SUPERFAMILY SSF82199 4 148 1.57E-42 T 05-07-2017 AC028_RS00305 1f315021e637be886eacf41f8cb3e564 155 Gene3D G3DSA:2.170.270.10 4 150 1.1E-43 T 05-07-2017 AC028_RS00305 1f315021e637be886eacf41f8cb3e564 155 SMART SM00317 3 128 3.1E-31 T 05-07-2017 IPR001214 SET domain GO:0005515 AC028_RS00305 1f315021e637be886eacf41f8cb3e564 155 Pfam PF00856 SET domain 14 122 4.1E-20 T 05-07-2017 IPR001214 SET domain GO:0005515 AC028_RS10670 15d2098c45dd7a0c7a32c8d2549d450b 148 Pfam PF05258 Protein of unknown function (DUF721) 31 94 1.8E-10 T 05-07-2017 IPR007922 Protein of unknown function DUF721/UPF0232 AC028_RS18385 f7aa6a322436b7197f4bfbc9afd13cf4 89 PIRSF PIRSF004669 1 89 4.5E-23 T 05-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AC028_RS18385 f7aa6a322436b7197f4bfbc9afd13cf4 89 Pfam PF01313 Bacterial export proteins, family 3 10 77 4.8E-20 T 05-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AC028_RS18385 f7aa6a322436b7197f4bfbc9afd13cf4 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 8.0E-15 T 05-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AC028_RS18385 f7aa6a322436b7197f4bfbc9afd13cf4 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 8.0E-15 T 05-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AC028_RS18385 f7aa6a322436b7197f4bfbc9afd13cf4 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 8.0E-15 T 05-07-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AC028_RS15690 819d5692e49166aa7157d53e2dc251ac 159 Pfam PF05433 Glycine zipper 2TM domain 67 113 1.1E-9 T 05-07-2017 IPR008816 Glycine zipper 2TM domain GO:0019867 AC028_RS03755 46036b8bba206b71832fa58bc29039af 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 1.7E-12 T 05-07-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 AC028_RS03755 46036b8bba206b71832fa58bc29039af 157 SUPERFAMILY SSF54534 3 140 1.39E-36 T 05-07-2017 AC028_RS03755 46036b8bba206b71832fa58bc29039af 157 Gene3D G3DSA:3.10.50.40 126 141 3.5E-19 T 05-07-2017 AC028_RS03755 46036b8bba206b71832fa58bc29039af 157 Gene3D G3DSA:3.10.50.40 3 80 3.5E-19 T 05-07-2017 AC028_RS09125 525ce9e4c83c8620ee37ac748394d9e8 302 Pfam PF04366 Las17-binding protein actin regulator 100 211 5.0E-27 T 05-07-2017 IPR007461 Ysc84 actin-binding domain AC028_RS12165 4e9689319c2733d4cbe3eeca16c5553e 249 SMART SM00849 19 192 7.0E-4 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS12165 4e9689319c2733d4cbe3eeca16c5553e 249 SUPERFAMILY SSF56281 5 215 1.83E-27 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS12165 4e9689319c2733d4cbe3eeca16c5553e 249 Pfam PF12706 Beta-lactamase superfamily domain 32 189 1.2E-13 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS12165 4e9689319c2733d4cbe3eeca16c5553e 249 Gene3D G3DSA:3.60.15.10 7 185 6.4E-22 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS13680 ee8e41810cea223c3a93837e07d65f03 354 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 63.759 T 05-07-2017 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AC028_RS13680 ee8e41810cea223c3a93837e07d65f03 354 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 1.6E-130 T 05-07-2017 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AC028_RS13680 ee8e41810cea223c3a93837e07d65f03 354 Pfam PF00814 Glycoprotease family 29 311 5.5E-100 T 05-07-2017 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AC028_RS13680 ee8e41810cea223c3a93837e07d65f03 354 SUPERFAMILY SSF53067 105 313 7.4E-41 T 05-07-2017 AC028_RS13680 ee8e41810cea223c3a93837e07d65f03 354 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 310 4.0E-113 T 05-07-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AC028_RS13680 ee8e41810cea223c3a93837e07d65f03 354 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 158 179 5.1E-52 T 05-07-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AC028_RS13680 ee8e41810cea223c3a93837e07d65f03 354 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 5.1E-52 T 05-07-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AC028_RS13680 ee8e41810cea223c3a93837e07d65f03 354 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 5.1E-52 T 05-07-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AC028_RS13680 ee8e41810cea223c3a93837e07d65f03 354 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 101 120 5.1E-52 T 05-07-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AC028_RS13680 ee8e41810cea223c3a93837e07d65f03 354 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 80 100 5.1E-52 T 05-07-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AC028_RS13680 ee8e41810cea223c3a93837e07d65f03 354 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 135 147 5.1E-52 T 05-07-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AC028_RS13680 ee8e41810cea223c3a93837e07d65f03 354 SUPERFAMILY SSF53067 3 127 1.42E-30 T 05-07-2017 AC028_RS13680 ee8e41810cea223c3a93837e07d65f03 354 Gene3D G3DSA:3.30.420.40 2 163 1.2E-47 T 05-07-2017 AC028_RS13680 ee8e41810cea223c3a93837e07d65f03 354 ProSitePatterns PS01016 Glycoprotease family signature. 100 120 - T 05-07-2017 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 AC028_RS11335 7e1859d1fbb2208f4ee90db8dcfcf6eb 219 Gene3D G3DSA:3.90.79.10 46 211 1.7E-37 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS11335 7e1859d1fbb2208f4ee90db8dcfcf6eb 219 SUPERFAMILY SSF55811 41 208 6.68E-28 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS11335 7e1859d1fbb2208f4ee90db8dcfcf6eb 219 Pfam PF00293 NUDIX domain 73 139 2.1E-7 T 05-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AC028_RS19585 223b5ec7f69b9c02d513d48f508b188e 218 SUPERFAMILY SSF52499 11 210 9.42E-50 T 05-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AC028_RS19585 223b5ec7f69b9c02d513d48f508b188e 218 Gene3D G3DSA:3.40.50.850 12 210 4.2E-44 T 05-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AC028_RS19585 223b5ec7f69b9c02d513d48f508b188e 218 Pfam PF00857 Isochorismatase family 19 169 5.5E-29 T 05-07-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AC028_RS18670 c05508a098a46a08731dce0c528c04da 110 SUPERFAMILY SSF140566 5 81 5.75E-8 T 05-07-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AC028_RS18670 c05508a098a46a08731dce0c528c04da 110 Gene3D G3DSA:1.20.58.300 6 45 4.1E-5 T 05-07-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AC028_RS15940 935d16e9c102a64210736e88d8648c9b 325 Pfam PF01609 Transposase DDE domain 135 310 7.9E-35 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS15940 935d16e9c102a64210736e88d8648c9b 325 Pfam PF05598 Transposase domain (DUF772) 50 122 2.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS01185 c94b3d9b848a7310b631fbebf1d3feea 133 Pfam PF00072 Response regulator receiver domain 16 128 1.0E-27 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS01185 c94b3d9b848a7310b631fbebf1d3feea 133 Gene3D G3DSA:3.40.50.2300 13 131 1.2E-36 T 05-07-2017 AC028_RS01185 c94b3d9b848a7310b631fbebf1d3feea 133 SUPERFAMILY SSF52172 13 131 2.7E-36 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS01185 c94b3d9b848a7310b631fbebf1d3feea 133 SMART SM00448 14 127 8.4E-38 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS15410 82522b94a46e4e54cf6f5e8fcfdcc3ea 152 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 10 152 34.01 T 05-07-2017 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AC028_RS15410 82522b94a46e4e54cf6f5e8fcfdcc3ea 152 Gene3D G3DSA:3.10.129.10 9 149 2.0E-53 T 05-07-2017 IPR029069 HotDog domain AC028_RS15410 82522b94a46e4e54cf6f5e8fcfdcc3ea 152 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 10 149 1.9E-60 T 05-07-2017 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AC028_RS15410 82522b94a46e4e54cf6f5e8fcfdcc3ea 152 Pfam PF07977 FabA-like domain 19 144 1.6E-39 T 05-07-2017 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AC028_RS15410 82522b94a46e4e54cf6f5e8fcfdcc3ea 152 SUPERFAMILY SSF54637 13 150 1.26E-44 T 05-07-2017 IPR029069 HotDog domain AC028_RS15725 c07c5bc6c17f2b9827d3208415a9ca30 853 SUPERFAMILY SSF54001 270 392 8.41E-11 T 05-07-2017 AC028_RS15725 c07c5bc6c17f2b9827d3208415a9ca30 853 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 61 222 1.5E-24 T 05-07-2017 IPR024618 Domain of unknown function DUF3857 AC028_RS15725 c07c5bc6c17f2b9827d3208415a9ca30 853 Pfam PF01841 Transglutaminase-like superfamily 271 347 6.6E-7 T 05-07-2017 IPR002931 Transglutaminase-like AC028_RS19735 f722c8d499fb6510476b91ab34b52710 101 Pfam PF06305 Protein of unknown function (DUF1049) 23 80 2.1E-8 T 05-07-2017 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 AC028_RS16130 b6b413869881443022d0d5aba8320ce7 206 SUPERFAMILY SSF158472 66 114 1.83E-7 T 05-07-2017 AC028_RS16130 b6b413869881443022d0d5aba8320ce7 206 Pfam PF00672 HAMP domain 46 114 8.4E-12 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS16130 b6b413869881443022d0d5aba8320ce7 206 SMART SM00304 65 117 0.0078 T 05-07-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AC028_RS14220 f5f46e6a77ec83c46c3b4442ec997fd4 181 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 6 144 1.1E-68 T 05-07-2017 IPR006521 Tail protein I AC028_RS14220 f5f46e6a77ec83c46c3b4442ec997fd4 181 Pfam PF09684 Phage tail protein (Tail_P2_I) 6 147 1.7E-47 T 05-07-2017 IPR006521 Tail protein I AC028_RS15075 1faa5af3112a11d7790cd1c93678c991 296 Gene3D G3DSA:3.30.1330.60 215 280 2.4E-5 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS15075 1faa5af3112a11d7790cd1c93678c991 296 SUPERFAMILY SSF103088 215 280 7.72E-8 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS04755 20ceb80359b2fb078bd670ad1c3c94f8 143 Gene3D G3DSA:3.10.129.10 6 140 3.7E-4 T 05-07-2017 IPR029069 HotDog domain AC028_RS04755 20ceb80359b2fb078bd670ad1c3c94f8 143 SUPERFAMILY SSF54637 3 139 1.14E-14 T 05-07-2017 IPR029069 HotDog domain AC028_RS05950 924e2173f9fc2e8e672438f3b2ddab84 437 Pfam PF00860 Permease family 17 399 1.8E-47 T 05-07-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AC028_RS05950 924e2173f9fc2e8e672438f3b2ddab84 437 PIRSF PIRSF005353 4 437 1.4E-165 T 05-07-2017 IPR026033 Purine permease PbuG-like AC028_RS13250 2e5b7fe6569aead156892d6c96246798 494 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 424 9.7E-72 T 05-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AC028_RS13250 2e5b7fe6569aead156892d6c96246798 494 Pfam PF01554 MatE 22 183 5.4E-31 T 05-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AC028_RS13250 2e5b7fe6569aead156892d6c96246798 494 Pfam PF01554 MatE 251 411 1.1E-23 T 05-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AC028_RS13250 2e5b7fe6569aead156892d6c96246798 494 PIRSF PIRSF006603 1 458 8.3E-114 T 05-07-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AC028_RS00365 bb94858badc54f0b495b909315053ef8 171 PIRSF PIRSF014995 1 171 6.2E-73 T 05-07-2017 IPR014469 Protein of unknown function DUF2271 AC028_RS00365 bb94858badc54f0b495b909315053ef8 171 Pfam PF10029 Predicted periplasmic protein (DUF2271) 22 163 3.9E-53 T 05-07-2017 IPR014469 Protein of unknown function DUF2271 AC028_RS04565 fb23dec2fe50e8eea8f74e7f24f80bd2 248 SUPERFAMILY SSF52540 10 226 2.09E-59 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS04565 fb23dec2fe50e8eea8f74e7f24f80bd2 248 Pfam PF00005 ABC transporter 23 165 1.5E-28 T 05-07-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AC028_RS04565 fb23dec2fe50e8eea8f74e7f24f80bd2 248 SMART SM00382 30 212 2.2E-12 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS04565 fb23dec2fe50e8eea8f74e7f24f80bd2 248 Gene3D G3DSA:3.40.50.300 1 229 1.7E-66 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS07745 5e38e80963e3e24539f6ed571eb0a8ab 223 Gene3D G3DSA:1.10.10.60 43 96 1.6E-5 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS07745 5e38e80963e3e24539f6ed571eb0a8ab 223 SUPERFAMILY SSF46689 97 150 1.75E-8 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS07745 5e38e80963e3e24539f6ed571eb0a8ab 223 Pfam PF12833 Helix-turn-helix domain 70 146 1.1E-14 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS07745 5e38e80963e3e24539f6ed571eb0a8ab 223 SMART SM00342 62 144 8.7E-9 T 05-07-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AC028_RS07745 5e38e80963e3e24539f6ed571eb0a8ab 223 Gene3D G3DSA:1.10.10.60 97 148 3.8E-12 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS07845 d13f336da82160491351ba01ea6bc4fa 649 Pfam PF02446 4-alpha-glucanotransferase 311 620 7.4E-70 T 05-07-2017 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AC028_RS07845 d13f336da82160491351ba01ea6bc4fa 649 Pfam PF02446 4-alpha-glucanotransferase 158 303 3.0E-13 T 05-07-2017 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AC028_RS07845 d13f336da82160491351ba01ea6bc4fa 649 SUPERFAMILY SSF51445 152 624 1.72E-116 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS07845 d13f336da82160491351ba01ea6bc4fa 649 Gene3D G3DSA:3.20.20.80 309 625 1.2E-98 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS07845 d13f336da82160491351ba01ea6bc4fa 649 Gene3D G3DSA:3.20.20.80 150 302 1.4E-26 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS12690 3144ded43a7e186e3cfba6b06130797f 73 SMART SM00966 6 51 5.5E-6 T 05-07-2017 IPR007159 SpoVT-AbrB domain GO:0003677 AC028_RS12690 3144ded43a7e186e3cfba6b06130797f 73 SUPERFAMILY SSF89447 1 63 1.06E-11 T 05-07-2017 AC028_RS12690 3144ded43a7e186e3cfba6b06130797f 73 Gene3D G3DSA:2.10.260.10 1 48 6.7E-9 T 05-07-2017 AC028_RS12690 3144ded43a7e186e3cfba6b06130797f 73 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 46 6.1E-6 T 05-07-2017 IPR007159 SpoVT-AbrB domain GO:0003677 AC028_RS12690 3144ded43a7e186e3cfba6b06130797f 73 TIGRFAM TIGR02609 doc_partner: putative addiction module antidote 3 73 8.7E-25 T 05-07-2017 IPR013432 Putative addiction module antidote AC028_RS04780 f2e01426f1aa87b6ca6430e3ee4d2c84 324 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 91 250 2.7E-7 T 05-07-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AC028_RS04780 f2e01426f1aa87b6ca6430e3ee4d2c84 324 PIRSF PIRSF028561 1 320 4.6E-168 T 05-07-2017 IPR014548 Predicted acyltransferase AC028_RS00455 3b20f366f1b49db46cefe77ace86e828 227 Pfam PF11306 Protein of unknown function (DUF3108) 12 216 3.8E-20 T 05-07-2017 IPR021457 Protein of unknown function DUF3108 AC028_RS13370 c181c3cb4591cbd0a45a1c15ba8fce9f 384 Gene3D G3DSA:3.90.226.10 12 212 2.2E-47 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS13370 c181c3cb4591cbd0a45a1c15ba8fce9f 384 Pfam PF16113 Enoyl-CoA hydratase/isomerase 14 362 1.2E-109 T 05-07-2017 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 AC028_RS13370 c181c3cb4591cbd0a45a1c15ba8fce9f 384 SUPERFAMILY SSF52096 275 348 7.46E-55 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS13370 c181c3cb4591cbd0a45a1c15ba8fce9f 384 SUPERFAMILY SSF52096 11 203 7.46E-55 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS02795 c846863f00bb9452b684f59df05b1767 675 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 4 675 25.645 T 05-07-2017 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 AC028_RS02795 c846863f00bb9452b684f59df05b1767 675 Pfam PF03030 Inorganic H+ pyrophosphatase 15 670 1.7E-268 T 05-07-2017 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 AC028_RS02795 c846863f00bb9452b684f59df05b1767 675 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 12 675 4.1E-267 T 05-07-2017 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 AC028_RS02795 c846863f00bb9452b684f59df05b1767 675 PIRSF PIRSF001265 2 675 3.2E-264 T 05-07-2017 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 AC028_RS08175 ff3f7338429c7e016ec303dec076bf69 208 Pfam PF13548 Domain of unknown function (DUF4126) 9 173 6.5E-44 T 05-07-2017 IPR025196 Domain of unknown function DUF4126 AC028_RS06165 2569676a977231839f3a9bb7ffcd9de3 436 SUPERFAMILY SSF103473 15 431 2.09E-64 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS06165 2569676a977231839f3a9bb7ffcd9de3 436 ProSitePatterns PS00216 Sugar transport proteins signature 1. 77 92 - T 05-07-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AC028_RS06165 2569676a977231839f3a9bb7ffcd9de3 436 Gene3D G3DSA:1.20.1250.20 254 431 7.8E-13 T 05-07-2017 AC028_RS06165 2569676a977231839f3a9bb7ffcd9de3 436 Gene3D G3DSA:1.20.1250.20 22 200 6.7E-31 T 05-07-2017 AC028_RS06165 2569676a977231839f3a9bb7ffcd9de3 436 Pfam PF07690 Major Facilitator Superfamily 28 366 6.1E-28 T 05-07-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AC028_RS15935 160f4a3f7d5ac63196ae4151cc2e8470 214 PRINTS PR00313 NodO calcium binding signature 113 122 2.9E-8 T 05-07-2017 AC028_RS15935 160f4a3f7d5ac63196ae4151cc2e8470 214 PRINTS PR00313 NodO calcium binding signature 83 94 2.9E-8 T 05-07-2017 AC028_RS15935 160f4a3f7d5ac63196ae4151cc2e8470 214 PRINTS PR00313 NodO calcium binding signature 95 103 2.9E-8 T 05-07-2017 AC028_RS15935 160f4a3f7d5ac63196ae4151cc2e8470 214 PRINTS PR00313 NodO calcium binding signature 104 112 2.9E-8 T 05-07-2017 AC028_RS15935 160f4a3f7d5ac63196ae4151cc2e8470 214 SUPERFAMILY SSF51120 70 187 3.4E-16 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS15935 160f4a3f7d5ac63196ae4151cc2e8470 214 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 100 118 - T 05-07-2017 IPR018511 Hemolysin-type calcium-binding conserved site AC028_RS15935 160f4a3f7d5ac63196ae4151cc2e8470 214 Gene3D G3DSA:2.150.10.10 72 185 1.3E-14 T 05-07-2017 IPR011049 Serralysin-like metalloprotease, C-terminal AC028_RS07105 bafc6c5cf0e2cff0bef2fb262630977a 375 Gene3D G3DSA:3.20.20.70 174 293 8.6E-9 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS07105 bafc6c5cf0e2cff0bef2fb262630977a 375 SMART SM00729 85 310 4.7E-4 T 05-07-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AC028_RS07105 bafc6c5cf0e2cff0bef2fb262630977a 375 SUPERFAMILY SSF102114 71 297 8.11E-11 T 05-07-2017 AC028_RS07105 bafc6c5cf0e2cff0bef2fb262630977a 375 Pfam PF04055 Radical SAM superfamily 89 267 9.5E-14 T 05-07-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 AC028_RS19905 86e35ae844962818522c079a47b01698 136 Pfam PF03918 Cytochrome C biogenesis protein 18 134 4.9E-48 T 05-07-2017 IPR005616 CcmH/CycL/Ccl2/NrfF family AC028_RS13220 e0cf7b7722292e9d74df80519eebcd93 356 Gene3D G3DSA:3.20.20.70 11 334 3.0E-49 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS13220 e0cf7b7722292e9d74df80519eebcd93 356 SUPERFAMILY SSF51412 13 333 2.29E-48 T 05-07-2017 AC028_RS13220 e0cf7b7722292e9d74df80519eebcd93 356 Pfam PF03060 Nitronate monooxygenase 19 345 1.8E-60 T 05-07-2017 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AC028_RS07380 6f655246012d97588468193907b37c79 341 Pfam PF03412 Peptidase C39 family 20 146 2.3E-33 T 05-07-2017 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 AC028_RS07380 6f655246012d97588468193907b37c79 341 Gene3D G3DSA:3.90.70.10 24 145 1.7E-21 T 05-07-2017 AC028_RS07380 6f655246012d97588468193907b37c79 341 SUPERFAMILY SSF90123 166 339 1.31E-25 T 05-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AC028_RS07380 6f655246012d97588468193907b37c79 341 Pfam PF00664 ABC transporter transmembrane region 174 330 3.7E-14 T 05-07-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AC028_RS07380 6f655246012d97588468193907b37c79 341 Gene3D G3DSA:1.20.1560.10 169 331 2.5E-29 T 05-07-2017 AC028_RS08550 1b6ff3f14da65a880de83080ba780758 261 Gene3D G3DSA:3.90.1140.10 15 261 3.4E-83 T 05-07-2017 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AC028_RS08550 1b6ff3f14da65a880de83080ba780758 261 SUPERFAMILY SSF55144 26 259 9.59E-53 T 05-07-2017 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AC028_RS08550 1b6ff3f14da65a880de83080ba780758 261 PIRSF PIRSF033949 1 261 2.2E-108 T 05-07-2017 IPR012390 Phosphoesterase SP1827 AC028_RS08550 1b6ff3f14da65a880de83080ba780758 261 Pfam PF08975 Domain of unknown function (DUF1868) 42 158 7.6E-32 T 05-07-2017 IPR015069 Domain of unknown function DUF1868 AC028_RS09905 fe2c8a195ecc38c060eec53534380219 151 Gene3D G3DSA:3.40.140.10 5 137 3.1E-31 T 05-07-2017 AC028_RS09905 fe2c8a195ecc38c060eec53534380219 151 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 102 3.1E-16 T 05-07-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 AC028_RS09905 fe2c8a195ecc38c060eec53534380219 151 SUPERFAMILY SSF53927 7 148 7.7E-35 T 05-07-2017 IPR016193 Cytidine deaminase-like GO:0003824 AC028_RS12020 e24f838387bfb5be12bb67c4d66b5a4c 131 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 48 95 4.0E-10 T 05-07-2017 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AC028_RS12020 e24f838387bfb5be12bb67c4d66b5a4c 131 SUPERFAMILY SSF69118 9 112 4.06E-24 T 05-07-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 AC028_RS12020 e24f838387bfb5be12bb67c4d66b5a4c 131 Gene3D G3DSA:1.20.1290.10 10 121 1.7E-30 T 05-07-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 AC028_RS12020 e24f838387bfb5be12bb67c4d66b5a4c 131 Pfam PF02627 Carboxymuconolactone decarboxylase family 32 112 9.6E-17 T 05-07-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AC028_RS06330 80440281e742cd68c0fba0258b96709d 139 Pfam PF12680 SnoaL-like domain 13 124 3.7E-16 T 05-07-2017 IPR009959 Polyketide cyclase SnoaL-like domain AC028_RS06330 80440281e742cd68c0fba0258b96709d 139 TIGRFAM TIGR02096 TIGR02096: conserved hypothetical protein 12 138 4.5E-42 T 05-07-2017 IPR011721 Conserved hypothetical protein CHP02096 AC028_RS06330 80440281e742cd68c0fba0258b96709d 139 SUPERFAMILY SSF54427 5 133 2.93E-27 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS06330 80440281e742cd68c0fba0258b96709d 139 Gene3D G3DSA:3.10.450.50 5 138 5.5E-27 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS09980 0c1a3bd146becc652f4c7d3306d8f55b 794 Pfam PF00593 TonB dependent receptor 500 792 1.0E-31 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS09980 0c1a3bd146becc652f4c7d3306d8f55b 794 Gene3D G3DSA:2.170.130.10 33 178 3.1E-12 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS09980 0c1a3bd146becc652f4c7d3306d8f55b 794 Gene3D G3DSA:2.40.170.20 184 792 3.2E-87 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS09980 0c1a3bd146becc652f4c7d3306d8f55b 794 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 172 1.2E-9 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS09980 0c1a3bd146becc652f4c7d3306d8f55b 794 SUPERFAMILY SSF56935 33 792 9.87E-95 T 05-07-2017 AC028_RS17390 5a422c16e52a97546d2c857594b5702a 70 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 55 1.4E-27 T 05-07-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AC028_RS17390 5a422c16e52a97546d2c857594b5702a 70 SUPERFAMILY SSF117130 1 53 8.89E-21 T 05-07-2017 AC028_RS17390 5a422c16e52a97546d2c857594b5702a 70 Pfam PF02599 Global regulator protein family 1 52 4.8E-27 T 05-07-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AC028_RS17390 5a422c16e52a97546d2c857594b5702a 70 Hamap MF_00167 Carbon storage regulator [csrA]. 1 70 21.753 T 05-07-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AC028_RS17390 5a422c16e52a97546d2c857594b5702a 70 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-20 T 05-07-2017 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AC028_RS02315 42792944f1217facf807c42005cd53c0 274 SUPERFAMILY SSF56281 10 250 6.91E-49 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS02315 42792944f1217facf807c42005cd53c0 274 Pfam PF00753 Metallo-beta-lactamase superfamily 14 205 2.4E-19 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS02315 42792944f1217facf807c42005cd53c0 274 SMART SM00849 14 205 1.4E-25 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS02315 42792944f1217facf807c42005cd53c0 274 Gene3D G3DSA:3.60.15.10 7 249 3.1E-51 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS21535 06036e3c8ccb1ee0f4f3ec6e25416a1c 130 Gene3D G3DSA:3.30.300.20 5 114 6.8E-37 T 05-07-2017 IPR015946 K homology domain-like, alpha/beta AC028_RS21535 06036e3c8ccb1ee0f4f3ec6e25416a1c 130 Pfam PF02033 Ribosome-binding factor A 8 110 3.3E-29 T 05-07-2017 IPR000238 Ribosome-binding factor A GO:0006364 AC028_RS21535 06036e3c8ccb1ee0f4f3ec6e25416a1c 130 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 4 117 21.03 T 05-07-2017 IPR000238 Ribosome-binding factor A GO:0006364 AC028_RS21535 06036e3c8ccb1ee0f4f3ec6e25416a1c 130 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 05-07-2017 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 AC028_RS21535 06036e3c8ccb1ee0f4f3ec6e25416a1c 130 SUPERFAMILY SSF89919 5 113 2.35E-30 T 05-07-2017 IPR023799 Ribosome-binding factor A domain AC028_RS21535 06036e3c8ccb1ee0f4f3ec6e25416a1c 130 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 7 114 3.6E-30 T 05-07-2017 IPR000238 Ribosome-binding factor A GO:0006364 AC028_RS21535 06036e3c8ccb1ee0f4f3ec6e25416a1c 130 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 97 3.0E-44 T 05-07-2017 IPR000238 Ribosome-binding factor A GO:0006364 AC028_RS04340 af97787e6e5755c0fdc28c303cdaa989 180 Gene3D G3DSA:3.40.50.300 7 171 2.7E-11 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS04340 af97787e6e5755c0fdc28c303cdaa989 180 SUPERFAMILY SSF52540 7 173 2.26E-17 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01805 8687b2872164b4301114919f6099e78e 168 Pfam PF13761 Domain of unknown function (DUF4166) 10 165 1.0E-31 T 05-07-2017 IPR025311 Domain of unknown function DUF4166 AC028_RS22115 dff4eb753ce3aa481170c96b005ae19b 83 Pfam PF11066 Protein of unknown function (DUF2867) 3 56 5.8E-7 T 05-07-2017 IPR021295 Protein of unknown function DUF2867 AC028_RS10955 85a51f288012577c8f9978aa9827ffca 126 Pfam PF01219 Prokaryotic diacylglycerol kinase 22 121 5.3E-33 T 05-07-2017 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 AC028_RS10955 85a51f288012577c8f9978aa9827ffca 126 Gene3D G3DSA:1.10.3830.10 10 126 2.8E-41 T 05-07-2017 AC028_RS16750 ddf2c0686052e8e75e01cd38523e65d4 211 Gene3D G3DSA:2.30.110.10 1 203 4.9E-52 T 05-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 AC028_RS16750 ddf2c0686052e8e75e01cd38523e65d4 211 PIRSF PIRSF010372 1 207 1.1E-42 T 05-07-2017 IPR007396 Transcriptional regulator PAI 2-type AC028_RS16750 ddf2c0686052e8e75e01cd38523e65d4 211 SUPERFAMILY SSF50475 9 186 7.85E-27 T 05-07-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 AC028_RS16750 ddf2c0686052e8e75e01cd38523e65d4 211 Pfam PF04299 Putative FMN-binding domain 1 159 2.9E-36 T 05-07-2017 IPR007396 Transcriptional regulator PAI 2-type AC028_RS21625 3c4709b0b0dd6537809a97556cbaa7bf 118 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 20 117 2.4E-36 T 05-07-2017 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS21625 3c4709b0b0dd6537809a97556cbaa7bf 118 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 118 19.155 T 05-07-2017 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 AC028_RS04800 9884ebdc45d6ef67cd185429805fa430 89 SUPERFAMILY SSF47336 5 84 2.75E-12 T 05-07-2017 IPR009081 Phosphopantetheine binding ACP domain AC028_RS04800 9884ebdc45d6ef67cd185429805fa430 89 Pfam PF00550 Phosphopantetheine attachment site 10 65 8.8E-9 T 05-07-2017 IPR009081 Phosphopantetheine binding ACP domain AC028_RS04800 9884ebdc45d6ef67cd185429805fa430 89 Gene3D G3DSA:1.10.1200.10 5 86 1.0E-17 T 05-07-2017 IPR009081 Phosphopantetheine binding ACP domain AC028_RS01265 0ae1bf54e47a78a6773690fb23377123 92 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 26 90 1.5E-14 T 05-07-2017 IPR008792 Coenzyme PQQ synthesis D AC028_RS01265 0ae1bf54e47a78a6773690fb23377123 92 Hamap MF_00655 Coenzyme PQQ synthesis protein D [pqqD]. 4 92 22.26 T 05-07-2017 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 AC028_RS01265 0ae1bf54e47a78a6773690fb23377123 92 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 10 90 8.6E-30 T 05-07-2017 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 AC028_RS06410 4843c7f067228b0d8eb355142ec6a5d6 150 Gene3D G3DSA:3.40.50.2300 33 144 1.2E-25 T 05-07-2017 AC028_RS06410 4843c7f067228b0d8eb355142ec6a5d6 150 SMART SM00448 32 139 5.3E-11 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS06410 4843c7f067228b0d8eb355142ec6a5d6 150 SUPERFAMILY SSF52172 33 144 7.68E-24 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS06410 4843c7f067228b0d8eb355142ec6a5d6 150 Pfam PF00072 Response regulator receiver domain 33 139 5.6E-15 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS21475 16a8c8022226174c715000f2581412da 199 Pfam PF01914 MarC family integral membrane protein 3 191 9.3E-48 T 05-07-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AC028_RS15070 4962b666eb8e2652399c2b0cb418cac2 127 Pfam PF14346 Domain of unknown function (DUF4398) 20 117 3.6E-16 T 05-07-2017 IPR025511 Domain of unknown function DUF4398 AC028_RS04360 65ad25215dfcf6de14295597db8ed0d4 286 Gene3D G3DSA:3.30.70.1070 143 210 5.1E-5 T 05-07-2017 IPR007730 Sporulation-related domain GO:0042834 AC028_RS04360 65ad25215dfcf6de14295597db8ed0d4 286 Pfam PF05036 Sporulation related domain 177 246 8.0E-8 T 05-07-2017 IPR007730 Sporulation-related domain GO:0042834 AC028_RS04360 65ad25215dfcf6de14295597db8ed0d4 286 SUPERFAMILY SSF110997 143 210 2.35E-5 T 05-07-2017 IPR007730 Sporulation-related domain GO:0042834 AC028_RS20335 522ef5ca5173f18bf68347789e637c8c 518 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 2 500 45.513 T 05-07-2017 IPR003846 Uncharacterised protein family UPF0061 AC028_RS20335 522ef5ca5173f18bf68347789e637c8c 518 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 28 484 5.4E-133 T 05-07-2017 IPR003846 Uncharacterised protein family UPF0061 AC028_RS10920 0353076bb0aa3d7a74e245344e914e64 305 SUPERFAMILY SSF51197 26 305 1.56E-87 T 05-07-2017 AC028_RS10920 0353076bb0aa3d7a74e245344e914e64 305 Gene3D G3DSA:3.60.130.10 22 305 1.5E-91 T 05-07-2017 AC028_RS10920 0353076bb0aa3d7a74e245344e914e64 305 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 32 298 6.8E-67 T 05-07-2017 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AC028_RS02515 79e62bfda4c76006c818e9bedc0cd9a7 126 Gene3D G3DSA:3.30.1330.40 3 125 3.3E-49 T 05-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AC028_RS02515 79e62bfda4c76006c818e9bedc0cd9a7 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 9.6E-50 T 05-07-2017 IPR006056 RidA family AC028_RS02515 79e62bfda4c76006c818e9bedc0cd9a7 126 SUPERFAMILY SSF55298 2 125 2.04E-45 T 05-07-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AC028_RS02515 79e62bfda4c76006c818e9bedc0cd9a7 126 Pfam PF01042 Endoribonuclease L-PSP 8 124 1.0E-40 T 05-07-2017 IPR006175 YjgF/YER057c/UK114 family AC028_RS06305 0121a2d88df3438b15bf20b0f1223315 226 Pfam PF10677 Protein of unknown function (DUF2490) 29 214 8.8E-45 T 05-07-2017 IPR019619 Protein of unknown function DUF2490 AC028_RS06155 174ee1fbcf8b6cb46d2a0c201bc60354 181 Gene3D G3DSA:2.160.10.10 3 175 6.6E-48 T 05-07-2017 AC028_RS06155 174ee1fbcf8b6cb46d2a0c201bc60354 181 SUPERFAMILY SSF51161 3 175 2.63E-45 T 05-07-2017 IPR011004 Trimeric LpxA-like AC028_RS06155 174ee1fbcf8b6cb46d2a0c201bc60354 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 9.2E-4 T 05-07-2017 IPR001451 Hexapeptide repeat AC028_RS06155 174ee1fbcf8b6cb46d2a0c201bc60354 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 46 1.3E-5 T 05-07-2017 IPR001451 Hexapeptide repeat AC028_RS20130 fe18ade2544d121962f8006275907683 150 SUPERFAMILY SSF55729 17 126 6.35E-18 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS20130 fe18ade2544d121962f8006275907683 150 Gene3D G3DSA:3.40.630.30 4 127 2.9E-30 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS20130 fe18ade2544d121962f8006275907683 150 Pfam PF00583 Acetyltransferase (GNAT) family 58 125 2.1E-10 T 05-07-2017 IPR000182 GNAT domain GO:0008080 AC028_RS16485 e138c3812c0559734fc4ed174dc44f73 83 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 29 82 4.4E-14 T 05-07-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AC028_RS16485 e138c3812c0559734fc4ed174dc44f73 83 Gene3D G3DSA:3.90.1590.10 3 82 8.7E-30 T 05-07-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AC028_RS16485 e138c3812c0559734fc4ed174dc44f73 83 SUPERFAMILY SSF51316 6 82 2.09E-29 T 05-07-2017 IPR011057 Mss4-like AC028_RS00750 357453a827c714a6b78f8fe53ba27e82 134 Pfam PF03994 Domain of Unknown Function (DUF350) 80 132 5.1E-10 T 05-07-2017 IPR007140 Protein of unknown function DUF350 AC028_RS00750 357453a827c714a6b78f8fe53ba27e82 134 Pfam PF03994 Domain of Unknown Function (DUF350) 15 68 1.1E-13 T 05-07-2017 IPR007140 Protein of unknown function DUF350 AC028_RS16395 7277e9ca71da6122c45de7e7a8030966 352 Gene3D G3DSA:3.40.1190.20 25 351 1.9E-90 T 05-07-2017 IPR029056 Ribokinase-like AC028_RS16395 7277e9ca71da6122c45de7e7a8030966 352 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 281 294 - T 05-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AC028_RS16395 7277e9ca71da6122c45de7e7a8030966 352 SUPERFAMILY SSF53613 30 348 2.18E-78 T 05-07-2017 IPR029056 Ribokinase-like AC028_RS16395 7277e9ca71da6122c45de7e7a8030966 352 Pfam PF00294 pfkB family carbohydrate kinase 30 339 4.5E-66 T 05-07-2017 IPR011611 Carbohydrate kinase PfkB AC028_RS16395 7277e9ca71da6122c45de7e7a8030966 352 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 61 85 - T 05-07-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AC028_RS10175 eec919281d399aa681c9c51a0b0cbca8 286 SMART SM00702 96 278 1.8E-41 T 05-07-2017 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AC028_RS10175 eec919281d399aa681c9c51a0b0cbca8 286 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 176 278 2.5E-18 T 05-07-2017 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AC028_RS01810 8872f249e8fe3df324ab939dbe7407e3 270 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 25 267 3.3E-67 T 05-07-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase AC028_RS01810 8872f249e8fe3df324ab939dbe7407e3 270 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 35 268 8.3E-51 T 05-07-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase AC028_RS01810 8872f249e8fe3df324ab939dbe7407e3 270 Gene3D G3DSA:3.60.140.10 5 268 1.3E-90 T 05-07-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase AC028_RS01810 8872f249e8fe3df324ab939dbe7407e3 270 SUPERFAMILY SSF64438 6 268 6.59E-73 T 05-07-2017 IPR011324 Cytotoxic necrotizing factor-like, catalytic AC028_RS04745 951e1917f6d0f714895414bac5ac4608 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 242 1.7E-50 T 05-07-2017 AC028_RS04745 951e1917f6d0f714895414bac5ac4608 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.6E-11 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS04745 951e1917f6d0f714895414bac5ac4608 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.6E-11 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS04745 951e1917f6d0f714895414bac5ac4608 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.6E-11 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS04745 951e1917f6d0f714895414bac5ac4608 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 190 1.8E-7 T 05-07-2017 AC028_RS04745 951e1917f6d0f714895414bac5ac4608 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 9.3E-41 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS04745 951e1917f6d0f714895414bac5ac4608 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 9.3E-41 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS04745 951e1917f6d0f714895414bac5ac4608 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 9.3E-41 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS04745 951e1917f6d0f714895414bac5ac4608 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 9.3E-41 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS04745 951e1917f6d0f714895414bac5ac4608 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 9.3E-41 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS04745 951e1917f6d0f714895414bac5ac4608 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 9.3E-41 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS04745 951e1917f6d0f714895414bac5ac4608 243 SUPERFAMILY SSF51735 6 242 2.58E-70 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS04745 951e1917f6d0f714895414bac5ac4608 243 Gene3D G3DSA:3.40.50.720 6 242 3.0E-73 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS06260 41628a45b40fac898dcdce65ad10e298 187 SUPERFAMILY SSF49482 3 186 2.22E-55 T 05-07-2017 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AC028_RS06260 41628a45b40fac898dcdce65ad10e298 187 Gene3D G3DSA:2.60.130.10 3 186 6.7E-61 T 05-07-2017 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AC028_RS06260 41628a45b40fac898dcdce65ad10e298 187 Pfam PF00775 Dioxygenase 31 156 9.0E-20 T 05-07-2017 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AC028_RS06260 41628a45b40fac898dcdce65ad10e298 187 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 6 187 3.0E-74 T 05-07-2017 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 AC028_RS06260 41628a45b40fac898dcdce65ad10e298 187 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 39 67 - T 05-07-2017 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AC028_RS05420 4cdfb6ea9d5e0ecd8e7ef2e490534d97 269 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 114 1.4E-17 T 05-07-2017 IPR002654 Glycosyl transferase, family 25 AC028_RS11720 3a9e2c34b39492b4ef4825d94694950f 119 SUPERFAMILY SSF53137 5 117 1.18E-48 T 05-07-2017 AC028_RS11720 3a9e2c34b39492b4ef4825d94694950f 119 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 4 119 1.6E-37 T 05-07-2017 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS11720 3a9e2c34b39492b4ef4825d94694950f 119 Gene3D G3DSA:3.30.420.100 26 119 7.7E-35 T 05-07-2017 AC028_RS11720 3a9e2c34b39492b4ef4825d94694950f 119 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 4 119 25.762 T 05-07-2017 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS11720 3a9e2c34b39492b4ef4825d94694950f 119 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 5 119 1.9E-36 T 05-07-2017 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS07815 8270e20d3731bc39d4c33e512b3d5b8b 572 Pfam PF03109 ABC1 family 122 240 2.3E-28 T 05-07-2017 IPR004147 UbiB domain AC028_RS07815 8270e20d3731bc39d4c33e512b3d5b8b 572 SUPERFAMILY SSF56112 104 168 2.18E-21 T 05-07-2017 IPR011009 Protein kinase-like domain AC028_RS07815 8270e20d3731bc39d4c33e512b3d5b8b 572 SUPERFAMILY SSF56112 203 330 2.18E-21 T 05-07-2017 IPR011009 Protein kinase-like domain AC028_RS03440 52c738d70d81b303fd7d2ee663296431 115 Pfam PF11171 Protein of unknown function (DUF2958) 4 114 1.8E-44 T 05-07-2017 IPR021341 Protein of unknown function DUF2958 AC028_RS08210 65cdc3767b61d837ad2fe54045ea9728 296 Pfam PF03186 CobD/Cbib protein 9 166 2.9E-9 T 05-07-2017 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 AC028_RS01155 4186973d0c7ec3d503a5160e14678275 158 SMART SM00260 6 146 0.005 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS01155 4186973d0c7ec3d503a5160e14678275 158 SUPERFAMILY SSF50341 5 112 5.89E-13 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS01155 4186973d0c7ec3d503a5160e14678275 158 Pfam PF01584 CheW-like domain 11 145 1.2E-14 T 05-07-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AC028_RS16835 117154bfed88902e2750b4d395b5cb45 228 Pfam PF11218 Protein of unknown function (DUF3011) 30 225 5.3E-89 T 05-07-2017 IPR021381 Protein of unknown function DUF3011 AC028_RS16565 17deb0053ff5842ff95066a2a1b34fe9 522 Pfam PF00916 Sulfate permease family 16 383 1.0E-55 T 05-07-2017 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AC028_RS06860 797003f10f9d96af63298ca044082bea 96 Pfam PF13466 STAS domain 13 74 5.1E-11 T 05-07-2017 IPR002645 STAS domain AC028_RS06860 797003f10f9d96af63298ca044082bea 96 Gene3D G3DSA:3.30.750.24 13 68 3.5E-7 T 05-07-2017 IPR002645 STAS domain AC028_RS06860 797003f10f9d96af63298ca044082bea 96 SUPERFAMILY SSF52091 10 72 3.14E-9 T 05-07-2017 IPR002645 STAS domain AC028_RS03290 5115bae71eaf632e1c4dd20fd2430772 155 Pfam PF06271 RDD family 14 144 2.4E-20 T 05-07-2017 IPR010432 RDD AC028_RS16620 33480ef02f1f526087bd0ebb213c80de 168 SUPERFAMILY SSF55729 3 156 1.38E-24 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS16620 33480ef02f1f526087bd0ebb213c80de 168 Gene3D G3DSA:3.40.630.30 1 131 2.9E-19 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS16620 33480ef02f1f526087bd0ebb213c80de 168 Pfam PF00583 Acetyltransferase (GNAT) family 54 128 2.8E-10 T 05-07-2017 IPR000182 GNAT domain GO:0008080 AC028_RS17410 a0b0ed1e284ea9a74d08b9055dfcacb5 233 Pfam PF02678 Pirin 7 119 9.0E-33 T 05-07-2017 IPR003829 Pirin, N-terminal domain AC028_RS17410 a0b0ed1e284ea9a74d08b9055dfcacb5 233 Gene3D G3DSA:2.60.120.10 4 231 1.2E-71 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS17410 a0b0ed1e284ea9a74d08b9055dfcacb5 233 PIRSF PIRSF006232 1 230 2.1E-53 T 05-07-2017 IPR012093 Pirin AC028_RS17410 a0b0ed1e284ea9a74d08b9055dfcacb5 233 SUPERFAMILY SSF51182 1 232 1.56E-73 T 05-07-2017 IPR011051 RmlC-like cupin domain AC028_RS01395 f8b047da72fbb8b762148a20d910aa2e 172 PRINTS PR01021 OMPA domain signature 99 114 6.6E-13 T 05-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AC028_RS01395 f8b047da72fbb8b762148a20d910aa2e 172 PRINTS PR01021 OMPA domain signature 69 91 6.6E-13 T 05-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AC028_RS01395 f8b047da72fbb8b762148a20d910aa2e 172 PRINTS PR01021 OMPA domain signature 114 130 6.6E-13 T 05-07-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AC028_RS01395 f8b047da72fbb8b762148a20d910aa2e 172 SUPERFAMILY SSF103088 65 169 1.02E-31 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS01395 f8b047da72fbb8b762148a20d910aa2e 172 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 67 169 1.2E-42 T 05-07-2017 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 AC028_RS01395 f8b047da72fbb8b762148a20d910aa2e 172 Pfam PF00691 OmpA family 68 163 1.6E-16 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS01395 f8b047da72fbb8b762148a20d910aa2e 172 Gene3D G3DSA:3.30.1330.60 66 170 2.3E-31 T 05-07-2017 IPR006665 OmpA-like domain AC028_RS03735 ccb34c188d490bf8c67315bfd80ed96c 364 Gene3D G3DSA:3.20.20.70 3 362 2.4E-129 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS03735 ccb34c188d490bf8c67315bfd80ed96c 364 SUPERFAMILY SSF51395 5 362 1.31E-119 T 05-07-2017 AC028_RS03735 ccb34c188d490bf8c67315bfd80ed96c 364 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 340 9.1E-83 T 05-07-2017 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AC028_RS06095 ff5f256404bbf9277cd0f25253a56b7f 485 Gene3D G3DSA:2.40.160.10 115 484 1.1E-28 T 05-07-2017 IPR023614 Porin domain AC028_RS06095 ff5f256404bbf9277cd0f25253a56b7f 485 Pfam PF07396 Phosphate-selective porin O and P 125 485 2.1E-84 T 05-07-2017 IPR010870 Phosphate-selective porin O/P AC028_RS06095 ff5f256404bbf9277cd0f25253a56b7f 485 SUPERFAMILY SSF56935 120 485 7.79E-11 T 05-07-2017 AC028_RS12180 b6f97a1cb456053e5bb2f3b4f8fd8257 165 Pfam PF01967 MoaC family 21 157 1.2E-47 T 05-07-2017 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AC028_RS12180 b6f97a1cb456053e5bb2f3b4f8fd8257 165 SUPERFAMILY SSF55040 18 160 6.67E-48 T 05-07-2017 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AC028_RS12180 b6f97a1cb456053e5bb2f3b4f8fd8257 165 Gene3D G3DSA:3.30.70.640 9 160 2.8E-56 T 05-07-2017 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AC028_RS12180 b6f97a1cb456053e5bb2f3b4f8fd8257 165 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 10 159 4.8E-51 T 05-07-2017 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 AC028_RS19260 8afb4199d2f9ee65b48cf295fe0832f0 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 42 138 2.8E-34 T 05-07-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 AC028_RS19260 8afb4199d2f9ee65b48cf295fe0832f0 143 Gene3D G3DSA:3.10.50.40 35 142 1.7E-43 T 05-07-2017 AC028_RS19260 8afb4199d2f9ee65b48cf295fe0832f0 143 SUPERFAMILY SSF54534 34 140 1.47E-37 T 05-07-2017 AC028_RS11375 5c7a6fb96c9fe5c8ac321e64a0ec394b 163 Pfam PF11304 Protein of unknown function (DUF3106) 56 153 8.5E-22 T 05-07-2017 IPR021455 Protein of unknown function DUF3106 AC028_RS21210 a71cee41ce000345f06d1933b953ecba 332 Gene3D G3DSA:3.40.47.10 6 166 2.2E-45 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS21210 a71cee41ce000345f06d1933b953ecba 332 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 111 191 9.7E-21 T 05-07-2017 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AC028_RS21210 a71cee41ce000345f06d1933b953ecba 332 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 243 332 3.5E-22 T 05-07-2017 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AC028_RS21210 a71cee41ce000345f06d1933b953ecba 332 SUPERFAMILY SSF53901 7 332 5.93E-49 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS21210 a71cee41ce000345f06d1933b953ecba 332 Gene3D G3DSA:3.40.47.10 167 332 2.2E-34 T 05-07-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 AC028_RS15270 69e91650477cbdc52e04a8849190a93c 370 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 129 366 5.3E-71 T 05-07-2017 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AC028_RS15270 69e91650477cbdc52e04a8849190a93c 370 Pfam PF02405 Permease MlaE 154 362 1.1E-67 T 05-07-2017 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 AC028_RS01035 62c72e222cb74c39facff880aec1dc88 561 Gene3D G3DSA:2.60.40.1180 473 555 4.5E-22 T 05-07-2017 IPR013780 Glycosyl hydrolase, all-beta AC028_RS01035 62c72e222cb74c39facff880aec1dc88 561 SMART SM00812 87 509 2.9E-216 T 05-07-2017 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 AC028_RS01035 62c72e222cb74c39facff880aec1dc88 561 Pfam PF01120 Alpha-L-fucosidase 82 445 3.7E-99 T 05-07-2017 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 AC028_RS01035 62c72e222cb74c39facff880aec1dc88 561 Pfam PF16757 Alpha-L-fucosidase C-terminal domain 480 554 5.0E-8 T 05-07-2017 IPR031919 Alpha-L-fucosidase, C-terminal KEGG: 00511+3.2.1.51 AC028_RS01035 62c72e222cb74c39facff880aec1dc88 561 SUPERFAMILY SSF51445 87 449 3.37E-106 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS01035 62c72e222cb74c39facff880aec1dc88 561 Gene3D G3DSA:3.20.20.80 85 449 4.2E-119 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS12270 8f52f0b91596ffc31c8a05f1b61cb10d 169 Pfam PF02620 Uncharacterized ACR, COG1399 61 167 1.4E-10 T 05-07-2017 IPR003772 Protein of unknown function DUF177 AC028_RS04170 9b82b7ed6845300c04176882c7ef56bd 283 SUPERFAMILY SSF58113 11 166 9.02E-6 T 05-07-2017 AC028_RS00370 d451337711cc37e71571cce6d01b4d23 267 Pfam PF10670 Domain of unknown function (DUF4198) 18 242 4.3E-71 T 05-07-2017 IPR019613 Protein of unknown function DUF4198 AC028_RS07995 6f5743699c2f5159d569340adb29aa3f 139 Pfam PF03334 Na+/H+ antiporter subunit 12 92 1.2E-24 T 05-07-2017 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 AC028_RS07995 6f5743699c2f5159d569340adb29aa3f 139 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 12 95 9.7E-23 T 05-07-2017 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 AC028_RS18450 d73e2acb10332abb79c1c9da7b34e170 105 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 30 103 2.0E-17 T 05-07-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AC028_RS18450 d73e2acb10332abb79c1c9da7b34e170 105 Pfam PF02049 Flagellar hook-basal body complex protein FliE 24 104 3.8E-28 T 05-07-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AC028_RS18450 d73e2acb10332abb79c1c9da7b34e170 105 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 105 16.127 T 05-07-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AC028_RS18450 d73e2acb10332abb79c1c9da7b34e170 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 69 85 4.7E-11 T 05-07-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AC028_RS18450 d73e2acb10332abb79c1c9da7b34e170 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 34 50 4.7E-11 T 05-07-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AC028_RS18450 d73e2acb10332abb79c1c9da7b34e170 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 90 103 4.7E-11 T 05-07-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AC028_RS21370 0394a6aec84c03a0e2761ff330ffa309 231 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 4 148 7.3E-23 T 05-07-2017 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 AC028_RS15670 7af7cf4a07bfd88fe84f7206c4e3cba9 188 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 77 84 - T 05-07-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AC028_RS15670 7af7cf4a07bfd88fe84f7206c4e3cba9 188 SUPERFAMILY SSF53056 16 187 7.85E-46 T 05-07-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AC028_RS15670 7af7cf4a07bfd88fe84f7206c4e3cba9 188 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 114 134 - T 05-07-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AC028_RS15670 7af7cf4a07bfd88fe84f7206c4e3cba9 188 Gene3D G3DSA:3.40.1050.10 19 188 2.5E-47 T 05-07-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AC028_RS15670 7af7cf4a07bfd88fe84f7206c4e3cba9 188 SMART SM00947 65 176 3.6E-29 T 05-07-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AC028_RS15670 7af7cf4a07bfd88fe84f7206c4e3cba9 188 Pfam PF00484 Carbonic anhydrase 73 187 1.6E-32 T 05-07-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AC028_RS14940 6fd67cf6f45befd0aabb72ed438efb50 367 SUPERFAMILY SSF53686 5 337 1.7E-66 T 05-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AC028_RS14940 6fd67cf6f45befd0aabb72ed438efb50 367 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 34 320 6.5E-47 T 05-07-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AC028_RS14940 6fd67cf6f45befd0aabb72ed438efb50 367 Gene3D G3DSA:3.40.50.1100 47 142 4.8E-23 T 05-07-2017 AC028_RS14940 6fd67cf6f45befd0aabb72ed438efb50 367 Gene3D G3DSA:3.40.50.1100 143 338 7.2E-35 T 05-07-2017 AC028_RS04570 1df65740f44346645d5410ab09565d62 533 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 124 132 6.6E-6 T 05-07-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AC028_RS04570 1df65740f44346645d5410ab09565d62 533 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 155 166 6.6E-6 T 05-07-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AC028_RS04570 1df65740f44346645d5410ab09565d62 533 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 235 249 6.6E-6 T 05-07-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AC028_RS04570 1df65740f44346645d5410ab09565d62 533 Pfam PF00561 alpha/beta hydrolase fold 123 266 1.7E-15 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS04570 1df65740f44346645d5410ab09565d62 533 SUPERFAMILY SSF53474 117 172 7.44E-30 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS04570 1df65740f44346645d5410ab09565d62 533 SUPERFAMILY SSF53474 211 265 7.44E-30 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS04570 1df65740f44346645d5410ab09565d62 533 SUPERFAMILY SSF53474 368 490 7.44E-30 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS04570 1df65740f44346645d5410ab09565d62 533 Pfam PF08386 TAP-like protein 417 515 2.1E-19 T 05-07-2017 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal AC028_RS04570 1df65740f44346645d5410ab09565d62 533 Gene3D G3DSA:3.40.50.1820 86 171 4.4E-52 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS04570 1df65740f44346645d5410ab09565d62 533 Gene3D G3DSA:3.40.50.1820 393 491 4.4E-52 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS04570 1df65740f44346645d5410ab09565d62 533 Gene3D G3DSA:3.40.50.1820 209 320 4.4E-52 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS02525 2639a011522bcaad5edd4b2d4ae25a02 423 Pfam PF03573 outer membrane porin, OprD family 28 417 2.1E-125 T 05-07-2017 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AC028_RS02525 2639a011522bcaad5edd4b2d4ae25a02 423 Gene3D G3DSA:2.40.160.10 35 417 2.7E-114 T 05-07-2017 IPR023614 Porin domain AC028_RS05110 c989224a56992a8974bd7c60a080239d 382 Gene3D G3DSA:3.20.20.100 60 367 1.8E-47 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS05110 c989224a56992a8974bd7c60a080239d 382 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 23 6.4E-5 T 05-07-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AC028_RS05110 c989224a56992a8974bd7c60a080239d 382 Pfam PF00248 Aldo/keto reductase family 61 367 6.9E-44 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS05110 c989224a56992a8974bd7c60a080239d 382 SUPERFAMILY SSF51430 60 368 9.95E-56 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS14200 4c694c460c8ff04dca5b408dd60c96a3 187 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 5 185 1.8E-57 T 05-07-2017 IPR013046 Phage baseplate assembly protein V/Gp45 AC028_RS14200 4c694c460c8ff04dca5b408dd60c96a3 187 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 113 1.9E-37 T 05-07-2017 IPR006531 Gp5 N-terminal AC028_RS03950 790639d5311c92f845ee1d15cc21ba72 135 Pfam PF16137 Domain of unknown function (DUF4845) 39 123 1.6E-26 T 05-07-2017 IPR032314 Protein of unknown function DUF4845 AC028_RS14000 7c1f333c982dc56a2d503c89e40af2d3 381 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 71 287 5.5E-73 T 05-07-2017 IPR003488 DNA recombination-mediator protein A GO:0009294 AC028_RS14000 7c1f333c982dc56a2d503c89e40af2d3 381 SUPERFAMILY SSF102405 83 289 1.08E-38 T 05-07-2017 AC028_RS14000 7c1f333c982dc56a2d503c89e40af2d3 381 Gene3D G3DSA:3.40.50.450 115 276 1.3E-9 T 05-07-2017 AC028_RS14000 7c1f333c982dc56a2d503c89e40af2d3 381 Pfam PF02481 DNA recombination-mediator protein A 73 279 2.7E-73 T 05-07-2017 IPR003488 DNA recombination-mediator protein A GO:0009294 AC028_RS07750 8c25ab9027174e16c4fb6ef2ec0c0aea 169 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 159 3.7E-54 T 05-07-2017 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AC028_RS07750 8c25ab9027174e16c4fb6ef2ec0c0aea 169 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 9 158 2.2E-56 T 05-07-2017 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AC028_RS07750 8c25ab9027174e16c4fb6ef2ec0c0aea 169 PIRSF PIRSF028301 1 168 5.2E-57 T 05-07-2017 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AC028_RS17570 ba9ccaa6952fd1cb615056c0f25de6c6 499 Pfam PF05231 MASE1 10 274 1.7E-26 T 05-07-2017 IPR007895 MASE1 AC028_RS18955 faa21d6c4a9d5e6a728190d33dd7b915 273 Pfam PF03618 Kinase/pyrophosphorylase 7 263 3.8E-71 T 05-07-2017 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 AC028_RS18955 faa21d6c4a9d5e6a728190d33dd7b915 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 4 272 70.938 T 05-07-2017 IPR026530 Phosphoenolpyruvate synthase regulatory protein AC028_RS16325 f8455c4db204ff26d7b06a7c6b57dd69 176 Pfam PF11101 Protein of unknown function (DUF2884) 34 118 6.9E-10 T 05-07-2017 IPR021307 Protein of unknown function DUF2884 AC028_RS12980 aaa9984b3fc9a59b77d5377ab6b856f1 106 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 5.1E-34 T 05-07-2017 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS12980 aaa9984b3fc9a59b77d5377ab6b856f1 106 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 05-07-2017 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AC028_RS12980 aaa9984b3fc9a59b77d5377ab6b856f1 106 SUPERFAMILY SSF141091 1 100 1.19E-33 T 05-07-2017 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS12980 aaa9984b3fc9a59b77d5377ab6b856f1 106 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 5.7E-37 T 05-07-2017 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS12980 aaa9984b3fc9a59b77d5377ab6b856f1 106 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 25.564 T 05-07-2017 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AC028_RS17015 87aa5185fe19c4f3ea8fc5a978f936f2 505 Gene3D G3DSA:3.40.50.300 4 244 6.2E-74 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS17015 87aa5185fe19c4f3ea8fc5a978f936f2 505 Gene3D G3DSA:3.40.50.300 246 490 2.5E-73 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS17015 87aa5185fe19c4f3ea8fc5a978f936f2 505 Pfam PF06745 KaiC 13 240 4.3E-35 T 05-07-2017 IPR014774 KaiC-like domain AC028_RS17015 87aa5185fe19c4f3ea8fc5a978f936f2 505 Pfam PF06745 KaiC 256 476 5.1E-31 T 05-07-2017 IPR014774 KaiC-like domain AC028_RS17015 87aa5185fe19c4f3ea8fc5a978f936f2 505 SMART SM00382 272 438 0.57 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS17015 87aa5185fe19c4f3ea8fc5a978f936f2 505 SMART SM00382 29 217 0.074 T 05-07-2017 IPR003593 AAA+ ATPase domain AC028_RS17015 87aa5185fe19c4f3ea8fc5a978f936f2 505 SUPERFAMILY SSF52540 255 487 3.51E-38 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS17015 87aa5185fe19c4f3ea8fc5a978f936f2 505 PIRSF PIRSF039117 1 494 2.7E-118 T 05-07-2017 IPR030665 Circadian clock protein kinase KaiC KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 AC028_RS17015 87aa5185fe19c4f3ea8fc5a978f936f2 505 SUPERFAMILY SSF52540 10 239 1.05E-34 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11210 e44550755184ca1b28d0e6a15653cb87 344 SUPERFAMILY SSF53335 178 288 1.24E-15 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS11210 e44550755184ca1b28d0e6a15653cb87 344 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 344 77.55 T 05-07-2017 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AC028_RS11210 e44550755184ca1b28d0e6a15653cb87 344 PIRSF PIRSF028774 1 344 1.3E-158 T 05-07-2017 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AC028_RS11210 e44550755184ca1b28d0e6a15653cb87 344 Gene3D G3DSA:3.40.50.150 177 280 4.0E-16 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS11210 e44550755184ca1b28d0e6a15653cb87 344 Pfam PF01728 FtsJ-like methyltransferase 179 271 1.8E-7 T 05-07-2017 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AC028_RS19890 9d4c221a7acc628059a0e0d8afa2de31 156 Gene3D G3DSA:2.40.50.140 27 124 9.5E-35 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS19890 9d4c221a7acc628059a0e0d8afa2de31 156 SUPERFAMILY SSF82093 30 136 1.7E-37 T 05-07-2017 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AC028_RS19890 9d4c221a7acc628059a0e0d8afa2de31 156 Pfam PF03100 CcmE 5 130 1.3E-42 T 05-07-2017 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AC028_RS19890 9d4c221a7acc628059a0e0d8afa2de31 156 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 140 31.466 T 05-07-2017 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AC028_RS03645 5bc2198dc9e147d13223ce0c71aa43cc 281 Pfam PF10099 Anti-sigma-K factor rskA 70 272 1.8E-25 T 05-07-2017 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 AC028_RS20275 caf949b688c7ea25596467be7510baac 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 22 341 2.1E-135 T 05-07-2017 IPR022462 Lysine-2,3-aminomutase-like AC028_RS20275 caf949b688c7ea25596467be7510baac 342 PIRSF PIRSF004911 13 342 3.8E-104 T 05-07-2017 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AC028_RS20275 caf949b688c7ea25596467be7510baac 342 Pfam PF13353 4Fe-4S single cluster domain 120 188 2.3E-5 T 05-07-2017 AC028_RS20275 caf949b688c7ea25596467be7510baac 342 SUPERFAMILY SSF102114 114 332 4.97E-18 T 05-07-2017 AC028_RS20275 caf949b688c7ea25596467be7510baac 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 21 335 4.0E-88 T 05-07-2017 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AC028_RS20275 caf949b688c7ea25596467be7510baac 342 Gene3D G3DSA:3.20.20.70 117 322 1.5E-9 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS14725 54580f0d82d05645acc344b8568a6327 267 PIRSF PIRSF002854 1 267 3.3E-103 T 05-07-2017 IPR004872 Lipoprotein NlpA family AC028_RS14725 54580f0d82d05645acc344b8568a6327 267 SUPERFAMILY SSF53850 31 267 5.43E-82 T 05-07-2017 AC028_RS14725 54580f0d82d05645acc344b8568a6327 267 Gene3D G3DSA:3.40.190.10 30 158 8.0E-51 T 05-07-2017 AC028_RS14725 54580f0d82d05645acc344b8568a6327 267 Pfam PF03180 NLPA lipoprotein 32 267 3.3E-98 T 05-07-2017 IPR004872 Lipoprotein NlpA family AC028_RS17435 527d44322b0e390228e391d9299ab196 293 Pfam PF12146 Serine aminopeptidase, S33 28 163 3.8E-15 T 05-07-2017 IPR022742 Serine aminopeptidase, S33 AC028_RS17435 527d44322b0e390228e391d9299ab196 293 SUPERFAMILY SSF53474 14 277 1.66E-27 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS17435 527d44322b0e390228e391d9299ab196 293 Gene3D G3DSA:3.40.50.1820 205 277 7.7E-25 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS17435 527d44322b0e390228e391d9299ab196 293 Gene3D G3DSA:3.40.50.1820 13 140 7.7E-25 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS17435 527d44322b0e390228e391d9299ab196 293 PIRSF PIRSF037442 1 288 1.3E-71 T 05-07-2017 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 AC028_RS12360 d58368b0d845f9a093829cbdfc7b6da9 185 Gene3D G3DSA:3.90.1140.10 12 173 3.5E-10 T 05-07-2017 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AC028_RS12360 d58368b0d845f9a093829cbdfc7b6da9 185 SUPERFAMILY SSF55144 6 172 4.97E-12 T 05-07-2017 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AC028_RS06140 0f9f818f853af782f04418b3a3a11ab8 612 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 606 8.6E-247 T 05-07-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AC028_RS06140 0f9f818f853af782f04418b3a3a11ab8 612 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 05-07-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AC028_RS06140 0f9f818f853af782f04418b3a3a11ab8 612 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 05-07-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AC028_RS06140 0f9f818f853af782f04418b3a3a11ab8 612 Pfam PF00920 Dehydratase family 34 603 7.7E-215 T 05-07-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AC028_RS06140 0f9f818f853af782f04418b3a3a11ab8 612 SUPERFAMILY SSF143975 4 418 6.02E-134 T 05-07-2017 AC028_RS06140 0f9f818f853af782f04418b3a3a11ab8 612 SUPERFAMILY SSF52016 419 607 1.02E-59 T 05-07-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AC028_RS06140 0f9f818f853af782f04418b3a3a11ab8 612 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 606 44.499 T 05-07-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AC028_RS01285 3e14001d95d82c019b754bf079627676 344 Gene3D G3DSA:3.40.367.20 120 322 5.6E-63 T 05-07-2017 AC028_RS01285 3e14001d95d82c019b754bf079627676 344 SUPERFAMILY SSF53067 22 341 3.89E-47 T 05-07-2017 AC028_RS01285 3e14001d95d82c019b754bf079627676 344 Pfam PF02685 Glucokinase 23 338 5.8E-98 T 05-07-2017 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AC028_RS07145 fcc894f7e69656af85799a321dbb1075 142 Pfam PF13670 Peptidase propeptide and YPEB domain 4 79 1.5E-12 T 05-07-2017 IPR025711 PepSY domain AC028_RS07145 fcc894f7e69656af85799a321dbb1075 142 Pfam PF13670 Peptidase propeptide and YPEB domain 83 138 1.5E-9 T 05-07-2017 IPR025711 PepSY domain AC028_RS11020 e8ccd8b26753368abf170ec86b7bfc93 387 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 2 386 68.541 T 05-07-2017 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 AC028_RS11020 e8ccd8b26753368abf170ec86b7bfc93 387 Pfam PF00296 Luciferase-like monooxygenase 1 331 1.8E-84 T 05-07-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AC028_RS11020 e8ccd8b26753368abf170ec86b7bfc93 387 SUPERFAMILY SSF51679 1 357 4.71E-93 T 05-07-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AC028_RS11020 e8ccd8b26753368abf170ec86b7bfc93 387 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 355 1.3E-188 T 05-07-2017 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 AC028_RS11020 e8ccd8b26753368abf170ec86b7bfc93 387 Gene3D G3DSA:3.20.20.30 293 357 9.8E-102 T 05-07-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AC028_RS11020 e8ccd8b26753368abf170ec86b7bfc93 387 Gene3D G3DSA:3.20.20.30 1 255 9.8E-102 T 05-07-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AC028_RS18400 527b0bfee5e96d4f04bf0623d915459b 135 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 35 102 4.2E-23 T 05-07-2017 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AC028_RS18400 527b0bfee5e96d4f04bf0623d915459b 135 Pfam PF04347 Flagellar biosynthesis protein, FliO 47 131 1.2E-24 T 05-07-2017 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AC028_RS01040 d6f45859e0799d3be9e55fd8ba457dd2 351 Pfam PF00704 Glycosyl hydrolases family 18 42 336 4.2E-26 T 05-07-2017 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 AC028_RS01040 d6f45859e0799d3be9e55fd8ba457dd2 351 SMART SM00636 24 338 1.9E-19 T 05-07-2017 IPR011583 Chitinase II GO:0004568|GO:0006032 AC028_RS01040 d6f45859e0799d3be9e55fd8ba457dd2 351 Gene3D G3DSA:3.20.20.80 314 346 3.9E-34 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS01040 d6f45859e0799d3be9e55fd8ba457dd2 351 Gene3D G3DSA:3.20.20.80 42 246 3.9E-34 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS01040 d6f45859e0799d3be9e55fd8ba457dd2 351 SUPERFAMILY SSF51445 310 342 7.33E-42 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS01040 d6f45859e0799d3be9e55fd8ba457dd2 351 SUPERFAMILY SSF51445 42 244 7.33E-42 T 05-07-2017 IPR017853 Glycoside hydrolase superfamily AC028_RS12315 085430f747192a0847dd8ff819341fda 357 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 20 344 3.0E-77 T 05-07-2017 IPR003770 Uncharacterised protein family UPF0755, YceG-like AC028_RS12315 085430f747192a0847dd8ff819341fda 357 Gene3D G3DSA:3.30.160.60 312 346 1.7E-16 T 05-07-2017 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 AC028_RS12315 085430f747192a0847dd8ff819341fda 357 Pfam PF02618 YceG-like family 51 339 4.3E-75 T 05-07-2017 IPR003770 Uncharacterised protein family UPF0755, YceG-like AC028_RS09670 2bebe7dc002f2a55c1a56eb4df9fa40d 294 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 190 254 2.0E-4 T 05-07-2017 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 AC028_RS09670 2bebe7dc002f2a55c1a56eb4df9fa40d 294 Gene3D G3DSA:3.40.50.150 138 207 1.1E-6 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS09670 2bebe7dc002f2a55c1a56eb4df9fa40d 294 SUPERFAMILY SSF53335 85 278 3.08E-24 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS09670 2bebe7dc002f2a55c1a56eb4df9fa40d 294 Gene3D G3DSA:3.40.50.150 208 280 1.7E-8 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS21790 6669923034d5f6e4890ed200d59da8c8 405 Gene3D G3DSA:1.20.1540.10 50 214 2.1E-30 T 05-07-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AC028_RS21790 6669923034d5f6e4890ed200d59da8c8 405 Pfam PF01694 Rhomboid family 64 215 4.3E-26 T 05-07-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AC028_RS21790 6669923034d5f6e4890ed200d59da8c8 405 SUPERFAMILY SSF144091 62 221 6.54E-31 T 05-07-2017 AC028_RS22100 e93aea8f0cdc2502716adb341b731dcb 301 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 49 217 1.2E-26 T 05-07-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AC028_RS22100 e93aea8f0cdc2502716adb341b731dcb 301 Gene3D G3DSA:2.40.100.10 46 124 4.7E-21 T 05-07-2017 IPR029000 Cyclophilin-like domain AC028_RS22100 e93aea8f0cdc2502716adb341b731dcb 301 Gene3D G3DSA:2.40.100.10 162 216 4.7E-21 T 05-07-2017 IPR029000 Cyclophilin-like domain AC028_RS22100 e93aea8f0cdc2502716adb341b731dcb 301 SUPERFAMILY SSF50891 161 262 5.84E-28 T 05-07-2017 IPR029000 Cyclophilin-like domain AC028_RS22100 e93aea8f0cdc2502716adb341b731dcb 301 SUPERFAMILY SSF50891 48 124 5.84E-28 T 05-07-2017 IPR029000 Cyclophilin-like domain AC028_RS17060 2205ef5a2d596cc58b539e1d10983fc8 441 PRINTS PR00723 Subtilisin serine protease family (S8) signature 228 241 2.5E-19 T 05-07-2017 IPR015500 Peptidase S8, subtilisin-related AC028_RS17060 2205ef5a2d596cc58b539e1d10983fc8 441 PRINTS PR00723 Subtilisin serine protease family (S8) signature 379 395 2.5E-19 T 05-07-2017 IPR015500 Peptidase S8, subtilisin-related AC028_RS17060 2205ef5a2d596cc58b539e1d10983fc8 441 PRINTS PR00723 Subtilisin serine protease family (S8) signature 190 209 2.5E-19 T 05-07-2017 IPR015500 Peptidase S8, subtilisin-related AC028_RS17060 2205ef5a2d596cc58b539e1d10983fc8 441 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 232 242 - T 05-07-2017 IPR022398 Peptidase S8, subtilisin, His-active site AC028_RS17060 2205ef5a2d596cc58b539e1d10983fc8 441 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 195 206 - T 05-07-2017 IPR023827 Peptidase S8, subtilisin, Asp-active site AC028_RS17060 2205ef5a2d596cc58b539e1d10983fc8 441 Gene3D G3DSA:3.40.50.200 127 433 1.4E-62 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS17060 2205ef5a2d596cc58b539e1d10983fc8 441 Pfam PF00082 Subtilase family 359 417 1.6E-9 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS17060 2205ef5a2d596cc58b539e1d10983fc8 441 Pfam PF00082 Subtilase family 190 327 4.1E-17 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS17060 2205ef5a2d596cc58b539e1d10983fc8 441 SUPERFAMILY SSF52743 169 432 3.93E-57 T 05-07-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AC028_RS05530 e3e89d08951d00a264b45a4fc93d8855 127 Pfam PF03692 Putative zinc- or iron-chelating domain 4 96 9.0E-13 T 05-07-2017 IPR005358 Putative zinc- or iron-chelating domain containing protein AC028_RS08650 76b071c4ea9c748fbaf33fb3bfabc8fb 194 Pfam PF12760 Transposase zinc-ribbon domain 23 69 2.4E-11 T 05-07-2017 IPR024442 Transposase, zinc-ribbon AC028_RS08650 76b071c4ea9c748fbaf33fb3bfabc8fb 194 Pfam PF12762 ISXO2-like transposase domain 137 188 2.5E-7 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS07855 739db76412816b35b5521a6b3f899ffe 61 Pfam PF11154 Protein of unknown function (DUF2934) 5 41 7.5E-12 T 05-07-2017 IPR021327 Protein of unknown function DUF2934 AC028_RS15215 fe2a38170a7c0057e2ed8d7418e8adad 299 Gene3D G3DSA:3.90.25.10 224 286 2.6E-31 T 05-07-2017 AC028_RS15215 fe2a38170a7c0057e2ed8d7418e8adad 299 Gene3D G3DSA:3.90.25.10 179 190 2.6E-31 T 05-07-2017 AC028_RS15215 fe2a38170a7c0057e2ed8d7418e8adad 299 SUPERFAMILY SSF51735 1 296 3.58E-99 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS15215 fe2a38170a7c0057e2ed8d7418e8adad 299 Gene3D G3DSA:3.40.50.720 1 178 2.4E-29 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS15215 fe2a38170a7c0057e2ed8d7418e8adad 299 Pfam PF04321 RmlD substrate binding domain 1 296 2.9E-107 T 05-07-2017 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581 AC028_RS15215 fe2a38170a7c0057e2ed8d7418e8adad 299 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 4 294 1.3E-106 T 05-07-2017 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581 AC028_RS12905 e86784aab79e56c69e81d1f0016c58f7 208 SUPERFAMILY SSF55166 80 205 2.01E-23 T 05-07-2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 AC028_RS12905 e86784aab79e56c69e81d1f0016c58f7 208 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 83 206 5.1E-36 T 05-07-2017 IPR003709 Peptidase M15B GO:0006508|GO:0008233 AC028_RS07070 4ca9cf021de8d1c309a53659b52acd26 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 134 2.1E-27 T 05-07-2017 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AC028_RS12155 d863902c1350940ebcfeb91f0bf36374 349 Gene3D G3DSA:3.40.50.2000 162 343 2.9E-43 T 05-07-2017 AC028_RS12155 d863902c1350940ebcfeb91f0bf36374 349 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 71 299 2.6E-43 T 05-07-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AC028_RS12155 d863902c1350940ebcfeb91f0bf36374 349 SUPERFAMILY SSF53756 8 345 1.52E-75 T 05-07-2017 AC028_RS12155 d863902c1350940ebcfeb91f0bf36374 349 Gene3D G3DSA:3.40.50.2000 10 151 2.2E-21 T 05-07-2017 AC028_RS08895 6ae96d2296b2ed3005b93721162a1ed6 340 Gene3D G3DSA:3.40.1190.20 1 332 4.8E-77 T 05-07-2017 IPR029056 Ribokinase-like AC028_RS08895 6ae96d2296b2ed3005b93721162a1ed6 340 SUPERFAMILY SSF53613 2 329 1.09E-70 T 05-07-2017 IPR029056 Ribokinase-like AC028_RS08895 6ae96d2296b2ed3005b93721162a1ed6 340 Pfam PF00294 pfkB family carbohydrate kinase 5 312 1.5E-34 T 05-07-2017 IPR011611 Carbohydrate kinase PfkB AC028_RS19390 b9a3c25f2d5867dde536369ab47d1132 121 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 13 67 1.3E-13 T 05-07-2017 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AC028_RS10070 11808f903ce793f3b7f59b6ecc493a06 247 Pfam PF01925 Sulfite exporter TauE/SafE 12 240 5.9E-29 T 05-07-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 AC028_RS14685 16fcf1c3e8702d7d9ee57f1b99ae2c5c 186 Pfam PF07209 Protein of unknown function (DUF1415) 11 178 4.7E-71 T 05-07-2017 IPR009858 Protein of unknown function DUF1415 AC028_RS21710 7fdd0e5be24dc1eaea3b32486c1e5345 222 Gene3D G3DSA:3.20.20.70 8 215 6.1E-62 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS21710 7fdd0e5be24dc1eaea3b32486c1e5345 222 SUPERFAMILY SSF51366 8 214 2.35E-53 T 05-07-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AC028_RS21710 7fdd0e5be24dc1eaea3b32486c1e5345 222 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 11 211 9.0E-41 T 05-07-2017 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AC028_RS21710 7fdd0e5be24dc1eaea3b32486c1e5345 222 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 8 216 39.117 T 05-07-2017 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AC028_RS17875 e67a708968cce4764fd1fcc7ce2b924e 202 SUPERFAMILY SSF55811 47 181 6.91E-17 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS17875 e67a708968cce4764fd1fcc7ce2b924e 202 Pfam PF00293 NUDIX domain 55 172 8.0E-7 T 05-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AC028_RS17875 e67a708968cce4764fd1fcc7ce2b924e 202 Gene3D G3DSA:3.90.79.10 46 181 1.1E-16 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS15135 e7fe33c391501de8edd571351d63fe94 39 SUPERFAMILY SSF46689 2 39 4.93E-6 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS15135 e7fe33c391501de8edd571351d63fe94 39 Gene3D G3DSA:1.10.10.60 2 39 7.7E-7 T 05-07-2017 IPR009057 Homeodomain-like GO:0003677 AC028_RS15135 e7fe33c391501de8edd571351d63fe94 39 Pfam PF01527 Transposase 2 39 8.1E-8 T 05-07-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AC028_RS14690 d9252e01a7870c50221d629e8b8f2e5d 275 Pfam PF00756 Putative esterase 95 165 3.5E-5 T 05-07-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 AC028_RS14690 d9252e01a7870c50221d629e8b8f2e5d 275 Gene3D G3DSA:3.40.50.1820 18 263 1.2E-19 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS14690 d9252e01a7870c50221d629e8b8f2e5d 275 SUPERFAMILY SSF53474 12 243 8.86E-21 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS00915 71cb930db197284ae383b304bd33fc93 348 SUPERFAMILY SSF53448 16 257 6.38E-33 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS00915 71cb930db197284ae383b304bd33fc93 348 Gene3D G3DSA:3.90.550.10 15 149 2.9E-14 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS00915 71cb930db197284ae383b304bd33fc93 348 Pfam PF00535 Glycosyl transferase family 2 17 172 2.5E-24 T 05-07-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AC028_RS05340 4eb60af9f35816a4750ef7e6df5d4547 265 Pfam PF02673 Bacitracin resistance protein BacA 7 254 7.1E-66 T 05-07-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AC028_RS05340 4eb60af9f35816a4750ef7e6df5d4547 265 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 2 260 15.762 T 05-07-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AC028_RS10240 a3af6b97e2e8ab1cd4e91cdf46f176c2 158 Pfam PF04612 Type II secretion system (T2SS), protein M 7 151 9.3E-25 T 05-07-2017 IPR007690 Type II secretion system, protein M GO:0006858 AC028_RS10240 a3af6b97e2e8ab1cd4e91cdf46f176c2 158 Gene3D G3DSA:3.30.1360.100 82 150 2.1E-9 T 05-07-2017 IPR023229 Type II secretion system protein M, periplasmic domain AC028_RS10240 a3af6b97e2e8ab1cd4e91cdf46f176c2 158 SUPERFAMILY SSF103054 82 155 2.22E-11 T 05-07-2017 IPR023229 Type II secretion system protein M, periplasmic domain AC028_RS19530 ca827d9a995790ca30fcf7e103c2a22f 306 SUPERFAMILY SSF53187 33 290 3.11E-36 T 05-07-2017 AC028_RS19530 ca827d9a995790ca30fcf7e103c2a22f 306 Gene3D G3DSA:3.40.630.10 249 303 6.7E-67 T 05-07-2017 AC028_RS19530 ca827d9a995790ca30fcf7e103c2a22f 306 Gene3D G3DSA:3.40.630.10 13 212 6.7E-67 T 05-07-2017 AC028_RS19530 ca827d9a995790ca30fcf7e103c2a22f 306 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 79 178 3.5E-8 T 05-07-2017 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AC028_RS05910 5807ba8e3248487c20ab9290d124f7fa 428 Pfam PF07687 Peptidase dimerisation domain 231 326 4.3E-5 T 05-07-2017 IPR011650 Peptidase M20, dimerisation domain AC028_RS05910 5807ba8e3248487c20ab9290d124f7fa 428 Gene3D G3DSA:3.40.630.10 19 239 9.3E-99 T 05-07-2017 AC028_RS05910 5807ba8e3248487c20ab9290d124f7fa 428 Gene3D G3DSA:3.40.630.10 365 422 9.3E-99 T 05-07-2017 AC028_RS05910 5807ba8e3248487c20ab9290d124f7fa 428 PIRSF PIRSF001235 20 424 2.2E-125 T 05-07-2017 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 AC028_RS05910 5807ba8e3248487c20ab9290d124f7fa 428 SUPERFAMILY SSF55031 228 340 2.09E-25 T 05-07-2017 IPR011650 Peptidase M20, dimerisation domain AC028_RS05910 5807ba8e3248487c20ab9290d124f7fa 428 SUPERFAMILY SSF53187 31 237 8.29E-76 T 05-07-2017 AC028_RS05910 5807ba8e3248487c20ab9290d124f7fa 428 SUPERFAMILY SSF53187 350 422 8.29E-76 T 05-07-2017 AC028_RS05910 5807ba8e3248487c20ab9290d124f7fa 428 Gene3D G3DSA:3.30.70.360 240 341 4.2E-35 T 05-07-2017 IPR011650 Peptidase M20, dimerisation domain AC028_RS05910 5807ba8e3248487c20ab9290d124f7fa 428 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 36 408 4.8E-112 T 05-07-2017 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 AC028_RS05910 5807ba8e3248487c20ab9290d124f7fa 428 Pfam PF01546 Peptidase family M20/M25/M40 91 420 5.7E-29 T 05-07-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AC028_RS12870 3c693a00aba7724aa79a1102a0ae5a4e 199 PIRSF PIRSF028520 1 164 8.5E-84 T 05-07-2017 IPR016890 Uncharacterised conserved protein UCP028520 AC028_RS12870 3c693a00aba7724aa79a1102a0ae5a4e 199 Pfam PF00583 Acetyltransferase (GNAT) family 49 141 6.3E-6 T 05-07-2017 IPR000182 GNAT domain GO:0008080 AC028_RS12870 3c693a00aba7724aa79a1102a0ae5a4e 199 SUPERFAMILY SSF55729 2 154 2.93E-15 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS12870 3c693a00aba7724aa79a1102a0ae5a4e 199 Gene3D G3DSA:3.40.630.30 1 147 3.4E-15 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS00655 61f210ca15c26d1942a12c0df64c46d4 335 Pfam PF12706 Beta-lactamase superfamily domain 89 301 5.6E-19 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS00655 61f210ca15c26d1942a12c0df64c46d4 335 SUPERFAMILY SSF56281 60 334 5.28E-50 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS00655 61f210ca15c26d1942a12c0df64c46d4 335 SMART SM00849 77 278 0.0022 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS00655 61f210ca15c26d1942a12c0df64c46d4 335 Gene3D G3DSA:3.60.15.10 59 335 4.6E-54 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS21080 a65cdd5f9a9340306fdbe3f6289964db 302 SMART SM01130 6 295 7.4E-94 T 05-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AC028_RS21080 a65cdd5f9a9340306fdbe3f6289964db 302 SUPERFAMILY SSF51569 6 293 3.24E-84 T 05-07-2017 AC028_RS21080 a65cdd5f9a9340306fdbe3f6289964db 302 Pfam PF00701 Dihydrodipicolinate synthetase family 8 292 9.3E-59 T 05-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AC028_RS21080 a65cdd5f9a9340306fdbe3f6289964db 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 1.8E-12 T 05-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AC028_RS21080 a65cdd5f9a9340306fdbe3f6289964db 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 1.8E-12 T 05-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AC028_RS21080 a65cdd5f9a9340306fdbe3f6289964db 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 1.8E-12 T 05-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AC028_RS21080 a65cdd5f9a9340306fdbe3f6289964db 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 1.8E-12 T 05-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AC028_RS21080 a65cdd5f9a9340306fdbe3f6289964db 302 PIRSF PIRSF001365 3 301 1.1E-75 T 05-07-2017 IPR002220 DapA-like GO:0008152|GO:0016829 AC028_RS21080 a65cdd5f9a9340306fdbe3f6289964db 302 Gene3D G3DSA:3.20.20.70 7 293 9.8E-90 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS02715 492036c1064950589db3e7efa0ba7fcd 141 Gene3D G3DSA:1.10.760.10 12 129 8.9E-18 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS02715 492036c1064950589db3e7efa0ba7fcd 141 SUPERFAMILY SSF46626 2 129 6.5E-20 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS02715 492036c1064950589db3e7efa0ba7fcd 141 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 46 119 6.3E-12 T 05-07-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AC028_RS01600 cb3ae938bebbc1fff1fd458007e78c0e 589 Pfam PF04183 IucA / IucC family 150 379 4.6E-43 T 05-07-2017 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 AC028_RS01600 cb3ae938bebbc1fff1fd458007e78c0e 589 Pfam PF06276 Ferric iron reductase FhuF-like transporter 409 568 9.0E-36 T 05-07-2017 IPR022770 Ferric iron reductase FhuF domain AC028_RS06375 374b81d77479395b51fcd14b371926fb 301 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 78 100 - T 05-07-2017 IPR030470 UbiA prenyltransferase conserved site AC028_RS06375 374b81d77479395b51fcd14b371926fb 301 Pfam PF01040 UbiA prenyltransferase family 39 283 1.8E-60 T 05-07-2017 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 AC028_RS06375 374b81d77479395b51fcd14b371926fb 301 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 16 299 29.231 T 05-07-2017 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AC028_RS06375 374b81d77479395b51fcd14b371926fb 301 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 23 297 9.5E-107 T 05-07-2017 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AC028_RS08520 69c08456243e57d1db38d3f8761de631 580 Pfam PF05569 BlaR1 peptidase M56 10 306 2.7E-84 T 05-07-2017 IPR008756 Peptidase M56 AC028_RS14100 4134d64470677c6a6807f47b8c0dec96 360 SUPERFAMILY SSF56349 60 347 8.54E-60 T 05-07-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AC028_RS14100 4134d64470677c6a6807f47b8c0dec96 360 Gene3D G3DSA:1.10.443.10 173 353 7.2E-40 T 05-07-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AC028_RS14100 4134d64470677c6a6807f47b8c0dec96 360 Pfam PF00589 Phage integrase family 176 343 1.2E-33 T 05-07-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AC028_RS14100 4134d64470677c6a6807f47b8c0dec96 360 Gene3D G3DSA:1.10.150.130 60 165 1.1E-5 T 05-07-2017 IPR023109 Integrase/recombinase, N-terminal AC028_RS15310 1c7e3f4824d9d205732fdab927c4fcac 129 SUPERFAMILY SSF54593 1 127 8.59E-34 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS15310 1c7e3f4824d9d205732fdab927c4fcac 129 Gene3D G3DSA:3.10.180.10 1 127 7.5E-35 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS15310 1c7e3f4824d9d205732fdab927c4fcac 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 3.6E-22 T 05-07-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AC028_RS06930 1ba26c986cd1565502e4044a5461f7bc 389 SUPERFAMILY SSF110738 1 375 4.18E-138 T 05-07-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AC028_RS06930 1ba26c986cd1565502e4044a5461f7bc 389 PIRSF PIRSF006078 1 377 1.7E-135 T 05-07-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AC028_RS06930 1ba26c986cd1565502e4044a5461f7bc 389 Pfam PF02595 Glycerate kinase family 3 373 4.0E-149 T 05-07-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AC028_RS06930 1ba26c986cd1565502e4044a5461f7bc 389 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 2.2E-154 T 05-07-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AC028_RS06930 1ba26c986cd1565502e4044a5461f7bc 389 Gene3D G3DSA:3.90.1510.10 42 275 3.3E-97 T 05-07-2017 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 AC028_RS13835 f89a6a783a5b9881dc62f67d0be07699 743 PIRSF PIRSF009407 1 742 0.0 T 05-07-2017 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AC028_RS13835 f89a6a783a5b9881dc62f67d0be07699 743 SUPERFAMILY SSF53659 4 741 0.0 T 05-07-2017 AC028_RS13835 f89a6a783a5b9881dc62f67d0be07699 743 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 3 742 0.0 T 05-07-2017 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AC028_RS13835 f89a6a783a5b9881dc62f67d0be07699 743 Gene3D G3DSA:3.40.718.10 539 645 2.0E-35 T 05-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AC028_RS13835 f89a6a783a5b9881dc62f67d0be07699 743 Gene3D G3DSA:3.40.718.10 340 363 2.0E-35 T 05-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AC028_RS13835 f89a6a783a5b9881dc62f67d0be07699 743 Gene3D G3DSA:3.40.718.10 147 285 2.0E-35 T 05-07-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AC028_RS13835 f89a6a783a5b9881dc62f67d0be07699 743 Pfam PF03971 Monomeric isocitrate dehydrogenase 6 738 0.0 T 05-07-2017 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AC028_RS22000 3a3f3cdf0fa3d1ce7eb4ee5ddeb5fb7c 244 Pfam PF04402 Protein of unknown function (DUF541) 40 240 7.3E-54 T 05-07-2017 IPR007497 Protein of unknown function DUF541 AC028_RS07120 44a11bbb8c3e41c068bf4c8c33040fca 106 SUPERFAMILY SSF51735 2 65 4.56E-16 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS07120 44a11bbb8c3e41c068bf4c8c33040fca 106 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2 65 1.5E-17 T 05-07-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AC028_RS07120 44a11bbb8c3e41c068bf4c8c33040fca 106 Gene3D G3DSA:3.40.50.720 2 65 8.0E-19 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS11180 b5f3976cb981ce7feea7fff26302da0f 275 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 259 5.1E-49 T 05-07-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AC028_RS11180 b5f3976cb981ce7feea7fff26302da0f 275 SUPERFAMILY SSF52096 4 259 2.41E-69 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS11180 b5f3976cb981ce7feea7fff26302da0f 275 Gene3D G3DSA:3.90.226.10 4 258 2.3E-67 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS20690 89785c42214cceacd923f1e800d6b9b3 393 Pfam PF00083 Sugar (and other) transporter 24 192 3.8E-19 T 05-07-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AC028_RS20690 89785c42214cceacd923f1e800d6b9b3 393 Gene3D G3DSA:1.20.1250.20 209 390 2.0E-16 T 05-07-2017 AC028_RS20690 89785c42214cceacd923f1e800d6b9b3 393 Gene3D G3DSA:1.20.1250.20 28 186 6.8E-18 T 05-07-2017 AC028_RS20690 89785c42214cceacd923f1e800d6b9b3 393 SUPERFAMILY SSF103473 25 393 2.62E-53 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS11055 7561cbea3fd4e41b94702657f43bf0a7 325 SUPERFAMILY SSF161098 112 304 9.59E-11 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS11055 7561cbea3fd4e41b94702657f43bf0a7 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 126 321 1.7E-30 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS03340 c4bc466c552b8c08af9f3e3ec210891b 678 SUPERFAMILY SSF48435 47 492 2.09E-103 T 05-07-2017 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 AC028_RS03340 c4bc466c552b8c08af9f3e3ec210891b 678 Pfam PF14718 Soluble lytic murein transglycosylase L domain 420 478 3.4E-10 T 05-07-2017 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AC028_RS03340 c4bc466c552b8c08af9f3e3ec210891b 678 Gene3D G3DSA:1.25.20.10 47 402 7.0E-88 T 05-07-2017 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 AC028_RS03340 c4bc466c552b8c08af9f3e3ec210891b 678 SUPERFAMILY SSF53955 496 654 3.38E-44 T 05-07-2017 IPR023346 Lysozyme-like domain AC028_RS03340 c4bc466c552b8c08af9f3e3ec210891b 678 Gene3D G3DSA:1.10.530.10 490 646 2.2E-45 T 05-07-2017 AC028_RS03340 c4bc466c552b8c08af9f3e3ec210891b 678 Pfam PF01464 Transglycosylase SLT domain 499 611 7.7E-24 T 05-07-2017 IPR008258 Transglycosylase SLT domain 1 AC028_RS03340 c4bc466c552b8c08af9f3e3ec210891b 678 Gene3D G3DSA:1.10.1240.20 420 476 6.2E-8 T 05-07-2017 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AC028_RS21640 4b8e84c53d80bb946c37433ac1b40ce3 251 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 05-07-2017 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS21640 4b8e84c53d80bb946c37433ac1b40ce3 251 Pfam PF00121 Triosephosphate isomerase 4 244 7.8E-88 T 05-07-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS21640 4b8e84c53d80bb946c37433ac1b40ce3 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 239 1.8E-65 T 05-07-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS21640 4b8e84c53d80bb946c37433ac1b40ce3 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 40.784 T 05-07-2017 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS21640 4b8e84c53d80bb946c37433ac1b40ce3 251 SUPERFAMILY SSF51351 1 247 1.44E-87 T 05-07-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AC028_RS21640 4b8e84c53d80bb946c37433ac1b40ce3 251 Gene3D G3DSA:3.20.20.70 1 249 1.5E-97 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS00675 e2cbfdb30c472e2d714f2dba77395513 252 Pfam PF07277 SapC 7 232 1.8E-65 T 05-07-2017 IPR010836 SapC AC028_RS05425 2d0ac54f4857285ae67a39eb9b6140d3 156 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 20 153 9.1E-36 T 05-07-2017 IPR012660 Thioesterase, putative AC028_RS05425 2d0ac54f4857285ae67a39eb9b6140d3 156 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 17 154 4.2E-49 T 05-07-2017 IPR012660 Thioesterase, putative AC028_RS05425 2d0ac54f4857285ae67a39eb9b6140d3 156 SUPERFAMILY SSF54637 11 153 6.11E-29 T 05-07-2017 IPR029069 HotDog domain AC028_RS05425 2d0ac54f4857285ae67a39eb9b6140d3 156 Gene3D G3DSA:3.10.129.10 4 155 7.7E-46 T 05-07-2017 IPR029069 HotDog domain AC028_RS04015 1988ccb90660985a5332010b98d6d700 187 SUPERFAMILY SSF56925 30 162 5.23E-8 T 05-07-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AC028_RS10195 92b5ed72c2373dee0a77abb5e68e2da4 690 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 36 632 1.3E-169 T 05-07-2017 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 AC028_RS10195 92b5ed72c2373dee0a77abb5e68e2da4 690 Pfam PF03958 Bacterial type II/III secretion system short domain 126 186 1.1E-10 T 05-07-2017 IPR005644 NolW-like AC028_RS10195 92b5ed72c2373dee0a77abb5e68e2da4 690 Pfam PF03958 Bacterial type II/III secretion system short domain 190 252 3.7E-10 T 05-07-2017 IPR005644 NolW-like AC028_RS10195 92b5ed72c2373dee0a77abb5e68e2da4 690 Pfam PF03958 Bacterial type II/III secretion system short domain 259 357 6.3E-16 T 05-07-2017 IPR005644 NolW-like AC028_RS10195 92b5ed72c2373dee0a77abb5e68e2da4 690 Pfam PF00263 Bacterial type II and III secretion system protein 459 623 8.1E-50 T 05-07-2017 IPR004846 Type II/III secretion system GO:0009306 AC028_RS10195 92b5ed72c2373dee0a77abb5e68e2da4 690 PRINTS PR00811 Bacterial general secretion pathway protein D signature 587 605 5.7E-35 T 05-07-2017 IPR001775 GspD/PilQ family AC028_RS10195 92b5ed72c2373dee0a77abb5e68e2da4 690 PRINTS PR00811 Bacterial general secretion pathway protein D signature 455 479 5.7E-35 T 05-07-2017 IPR001775 GspD/PilQ family AC028_RS10195 92b5ed72c2373dee0a77abb5e68e2da4 690 PRINTS PR00811 Bacterial general secretion pathway protein D signature 610 624 5.7E-35 T 05-07-2017 IPR001775 GspD/PilQ family AC028_RS10195 92b5ed72c2373dee0a77abb5e68e2da4 690 PRINTS PR00811 Bacterial general secretion pathway protein D signature 490 500 5.7E-35 T 05-07-2017 IPR001775 GspD/PilQ family AC028_RS10195 92b5ed72c2373dee0a77abb5e68e2da4 690 PRINTS PR00811 Bacterial general secretion pathway protein D signature 357 367 5.7E-35 T 05-07-2017 IPR001775 GspD/PilQ family AC028_RS22130 7cb0e789d5455cacb8beb6440411edea 132 Gene3D G3DSA:3.90.1590.10 9 115 6.8E-10 T 05-07-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AC028_RS22130 7cb0e789d5455cacb8beb6440411edea 132 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 40 107 3.0E-5 T 05-07-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AC028_RS22130 7cb0e789d5455cacb8beb6440411edea 132 SUPERFAMILY SSF51316 14 127 1.88E-13 T 05-07-2017 IPR011057 Mss4-like AC028_RS09585 44aac6a35a3230ccefef5d3e09e7130c 528 Pfam PF00106 short chain dehydrogenase 175 266 9.5E-7 T 05-07-2017 IPR002347 Short-chain dehydrogenase/reductase SDR AC028_RS09585 44aac6a35a3230ccefef5d3e09e7130c 528 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 380 479 2.6E-8 T 05-07-2017 AC028_RS09585 44aac6a35a3230ccefef5d3e09e7130c 528 Gene3D G3DSA:3.40.50.720 156 261 3.2E-46 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS09585 44aac6a35a3230ccefef5d3e09e7130c 528 Gene3D G3DSA:3.40.50.720 367 505 3.2E-46 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS09585 44aac6a35a3230ccefef5d3e09e7130c 528 SUPERFAMILY SSF51735 372 514 9.28E-28 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS09585 44aac6a35a3230ccefef5d3e09e7130c 528 SUPERFAMILY SSF51735 170 269 9.28E-28 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS01660 7f8c5ead919561dd62d139dbce2993e7 304 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 4 271 1.2E-57 T 05-07-2017 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 AC028_RS01660 7f8c5ead919561dd62d139dbce2993e7 304 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 304 102.831 T 05-07-2017 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 AC028_RS01660 7f8c5ead919561dd62d139dbce2993e7 304 Pfam PF03186 CobD/Cbib protein 7 284 1.1E-90 T 05-07-2017 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 AC028_RS06275 96f36f250f025f4c8aa57346987e8eef 137 SUPERFAMILY SSF69118 2 127 1.96E-38 T 05-07-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 AC028_RS06275 96f36f250f025f4c8aa57346987e8eef 137 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 5.2E-26 T 05-07-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AC028_RS06275 96f36f250f025f4c8aa57346987e8eef 137 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 4 124 7.5E-61 T 05-07-2017 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 AC028_RS06275 96f36f250f025f4c8aa57346987e8eef 137 Gene3D G3DSA:1.20.1290.10 4 130 2.3E-27 T 05-07-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 AC028_RS16060 d0b4b861483359397eb0f1ce25b0bf4a 181 SUPERFAMILY SSF54427 44 164 1.23E-24 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS16060 d0b4b861483359397eb0f1ce25b0bf4a 181 Pfam PF12680 SnoaL-like domain 48 155 1.7E-12 T 05-07-2017 IPR009959 Polyketide cyclase SnoaL-like domain AC028_RS16060 d0b4b861483359397eb0f1ce25b0bf4a 181 Gene3D G3DSA:3.10.450.50 43 163 1.0E-20 T 05-07-2017 IPR032710 NTF2-like domain AC028_RS14565 eed145c12f78c5bd441cd0aede2a48a0 87 Pfam PF11730 Protein of unknown function (DUF3297) 6 76 1.4E-36 T 05-07-2017 IPR021724 Protein of unknown function DUF3297 AC028_RS06180 1039dd20d26ca959a9234ab97d5d1df4 330 Pfam PF13557 Putative MetA-pathway of phenol degradation 72 324 9.2E-52 T 05-07-2017 IPR025737 MetA-pathway of phenol degradation, putative AC028_RS17045 4f2497e2c5936930cc5c9b359a73316f 156 Gene3D G3DSA:2.40.50.140 26 124 4.5E-35 T 05-07-2017 IPR012340 Nucleic acid-binding, OB-fold AC028_RS17045 4f2497e2c5936930cc5c9b359a73316f 156 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 140 30.929 T 05-07-2017 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AC028_RS17045 4f2497e2c5936930cc5c9b359a73316f 156 SUPERFAMILY SSF82093 30 136 2.62E-36 T 05-07-2017 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AC028_RS17045 4f2497e2c5936930cc5c9b359a73316f 156 Pfam PF03100 CcmE 5 130 3.3E-44 T 05-07-2017 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AC028_RS16495 e0e8f6eaafc4771be8150a808928e97a 76 Gene3D G3DSA:3.90.1590.10 6 75 9.3E-7 T 05-07-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AC028_RS01895 a6eae9b9df39146aeec8e5374b5864fd 203 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 188 9.7E-50 T 05-07-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 AC028_RS01895 a6eae9b9df39146aeec8e5374b5864fd 203 Gene3D G3DSA:3.40.50.300 4 192 1.1E-63 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01895 a6eae9b9df39146aeec8e5374b5864fd 203 SUPERFAMILY SSF52540 1 190 9.67E-34 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS01895 a6eae9b9df39146aeec8e5374b5864fd 203 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 3 195 26.725 T 05-07-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 AC028_RS01895 a6eae9b9df39146aeec8e5374b5864fd 203 Pfam PF01121 Dephospho-CoA kinase 5 181 1.9E-56 T 05-07-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 AC028_RS05285 297a4bdaf1933935e96f988fc2a2f2d1 158 SUPERFAMILY SSF53254 1 140 2.22E-27 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS05285 297a4bdaf1933935e96f988fc2a2f2d1 158 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 98 2.1E-14 T 05-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 AC028_RS05285 297a4bdaf1933935e96f988fc2a2f2d1 158 SMART SM00855 3 114 1.1E-6 T 05-07-2017 IPR013078 Histidine phosphatase superfamily, clade-1 AC028_RS05285 297a4bdaf1933935e96f988fc2a2f2d1 158 Gene3D G3DSA:3.40.50.1240 1 158 7.9E-49 T 05-07-2017 IPR029033 Histidine phosphatase superfamily AC028_RS08010 893db8bc6f717fa84ee62ae77b06f0c3 514 Pfam PF00361 Proton-conducting membrane transporter 129 417 1.9E-31 T 05-07-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS08010 893db8bc6f717fa84ee62ae77b06f0c3 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 163 187 2.4E-6 T 05-07-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS08010 893db8bc6f717fa84ee62ae77b06f0c3 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 381 407 2.4E-6 T 05-07-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS08010 893db8bc6f717fa84ee62ae77b06f0c3 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 2.4E-6 T 05-07-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS08010 893db8bc6f717fa84ee62ae77b06f0c3 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 236 260 2.4E-6 T 05-07-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS15715 fffbd7cb73ae9a7030613ce023c80940 263 Pfam PF05433 Glycine zipper 2TM domain 103 143 1.2E-9 T 05-07-2017 IPR008816 Glycine zipper 2TM domain GO:0019867 AC028_RS00105 d2041539b5cdb416a979d288a02af213 395 Pfam PF11187 Protein of unknown function (DUF2974) 77 159 1.2E-7 T 05-07-2017 IPR024499 Protein of unknown function DUF2974 AC028_RS00105 d2041539b5cdb416a979d288a02af213 395 SUPERFAMILY SSF53474 85 179 1.72E-14 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS00105 d2041539b5cdb416a979d288a02af213 395 Gene3D G3DSA:3.40.50.1820 58 179 1.6E-9 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS00210 253d38ca9b3b90b0a3dfe9b766a0604a 189 Pfam PF05433 Glycine zipper 2TM domain 89 127 2.4E-7 T 05-07-2017 IPR008816 Glycine zipper 2TM domain GO:0019867 AC028_RS04625 a488017aa4b62168e410f1ae9091560d 133 Gene3D G3DSA:3.10.129.10 7 129 1.5E-43 T 05-07-2017 IPR029069 HotDog domain AC028_RS04625 a488017aa4b62168e410f1ae9091560d 133 Pfam PF03061 Thioesterase superfamily 27 99 3.8E-18 T 05-07-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 AC028_RS04625 a488017aa4b62168e410f1ae9091560d 133 SUPERFAMILY SSF54637 5 130 5.83E-40 T 05-07-2017 IPR029069 HotDog domain AC028_RS04880 9c095469a12f4915b4e6cb9260dd0ec6 558 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 160 459 9.3E-13 T 05-07-2017 IPR005565 Haemolysin activator HlyB AC028_RS04880 9c095469a12f4915b4e6cb9260dd0ec6 558 Pfam PF08479 POTRA domain, ShlB-type 68 137 2.4E-7 T 05-07-2017 IPR013686 Polypeptide-transport-associated, ShlB-type AC028_RS04880 9c095469a12f4915b4e6cb9260dd0ec6 558 Gene3D G3DSA:2.40.160.50 171 558 8.3E-49 T 05-07-2017 AC028_RS07035 1b763da18aaa0b471e1f56c2c916b331 278 Pfam PF02517 CAAX protease self-immunity 167 266 6.7E-19 T 05-07-2017 IPR003675 CAAX amino terminal protease GO:0016020 AC028_RS06065 29abcf4c3ce1b4b869250e4fc19c79e4 220 Pfam PF02677 Uncharacterized BCR, COG1636 19 192 2.4E-62 T 05-07-2017 IPR003828 Protein of unknown function DUF208 AC028_RS06850 5cbbe375b7bcf0705260aadd16f558e8 181 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 7 150 2.4E-48 T 05-07-2017 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 AC028_RS06850 5cbbe375b7bcf0705260aadd16f558e8 181 Pfam PF02470 MlaD protein 41 119 4.9E-20 T 05-07-2017 IPR003399 Mce/MlaD AC028_RS10265 089ba2e83db39699c06ba13808de1dde 388 Pfam PF07786 Protein of unknown function (DUF1624) 21 173 2.8E-10 T 05-07-2017 IPR012429 Protein of unknown function DUF1624 KEGG: 00531+2.3.1.78|Reactome: R-HSA-2024096|Reactome: R-HSA-2206291 AC028_RS00340 ccad88f7d0d4d3d039f9a0cf20f08028 109 Gene3D G3DSA:2.102.10.10 2 106 1.9E-29 T 05-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AC028_RS00340 ccad88f7d0d4d3d039f9a0cf20f08028 109 SUPERFAMILY SSF50022 4 106 2.23E-25 T 05-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AC028_RS00340 ccad88f7d0d4d3d039f9a0cf20f08028 109 Pfam PF00355 Rieske [2Fe-2S] domain 4 95 1.9E-15 T 05-07-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AC028_RS01585 fb82dbe2162d5c6411e8f733a5c76657 429 SUPERFAMILY SSF56059 118 337 1.28E-30 T 05-07-2017 AC028_RS01585 fb82dbe2162d5c6411e8f733a5c76657 429 Gene3D G3DSA:3.30.470.20 135 352 3.9E-14 T 05-07-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AC028_RS01585 fb82dbe2162d5c6411e8f733a5c76657 429 Pfam PF02655 ATP-grasp domain 137 303 1.2E-6 T 05-07-2017 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 AC028_RS03650 6841f115cd4836b368685e90f47034ff 332 PRINTS PR00075 Fatty acid desaturase family 1 signature 231 252 4.5E-18 T 05-07-2017 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 AC028_RS03650 6841f115cd4836b368685e90f47034ff 332 PRINTS PR00075 Fatty acid desaturase family 1 signature 98 118 4.5E-18 T 05-07-2017 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 AC028_RS03650 6841f115cd4836b368685e90f47034ff 332 PRINTS PR00075 Fatty acid desaturase family 1 signature 274 288 4.5E-18 T 05-07-2017 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 AC028_RS03650 6841f115cd4836b368685e90f47034ff 332 PRINTS PR00075 Fatty acid desaturase family 1 signature 135 164 4.5E-18 T 05-07-2017 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 AC028_RS03650 6841f115cd4836b368685e90f47034ff 332 PRINTS PR00075 Fatty acid desaturase family 1 signature 53 73 4.5E-18 T 05-07-2017 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 AC028_RS03650 6841f115cd4836b368685e90f47034ff 332 Pfam PF00487 Fatty acid desaturase 75 302 3.7E-26 T 05-07-2017 IPR005804 Fatty acid desaturase domain GO:0006629 AC028_RS06360 e84d99d7ced554dfdc2c77bbd2ccb045 401 SUPERFAMILY SSF53383 8 389 3.16E-95 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS06360 e84d99d7ced554dfdc2c77bbd2ccb045 401 Gene3D G3DSA:3.90.1150.10 277 389 1.8E-34 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS06360 e84d99d7ced554dfdc2c77bbd2ccb045 401 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 6 389 44.895 T 05-07-2017 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AC028_RS06360 e84d99d7ced554dfdc2c77bbd2ccb045 401 Gene3D G3DSA:3.40.640.10 60 276 2.0E-74 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS06360 e84d99d7ced554dfdc2c77bbd2ccb045 401 Pfam PF00155 Aminotransferase class I and II 45 385 4.1E-51 T 05-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AC028_RS06360 e84d99d7ced554dfdc2c77bbd2ccb045 401 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 23 385 1.2E-145 T 05-07-2017 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AC028_RS01485 109fe62dcc9971b495b57e93db510066 805 Gene3D G3DSA:2.170.130.10 65 180 7.6E-18 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS01485 109fe62dcc9971b495b57e93db510066 805 Gene3D G3DSA:2.40.170.20 181 344 3.6E-90 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01485 109fe62dcc9971b495b57e93db510066 805 Gene3D G3DSA:2.40.170.20 410 801 3.6E-90 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS01485 109fe62dcc9971b495b57e93db510066 805 SUPERFAMILY SSF56935 404 802 8.93E-89 T 05-07-2017 AC028_RS01485 109fe62dcc9971b495b57e93db510066 805 SUPERFAMILY SSF56935 45 361 8.93E-89 T 05-07-2017 AC028_RS01485 109fe62dcc9971b495b57e93db510066 805 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 176 1.8E-13 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS01485 109fe62dcc9971b495b57e93db510066 805 Pfam PF00593 TonB dependent receptor 546 801 7.7E-32 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS03475 98a0d80963fefa83531b75c70fc08c82 181 Pfam PF11000 Protein of unknown function (DUF2840) 32 178 7.5E-60 T 05-07-2017 IPR021263 Protein of unknown function DUF2840 AC028_RS05810 ae8b205553f262fa46c43f45e9bb3d4f 142 SUPERFAMILY SSF82784 5 141 1.83E-44 T 05-07-2017 IPR003718 OsmC/Ohr family AC028_RS05810 ae8b205553f262fa46c43f45e9bb3d4f 142 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 8 140 2.5E-55 T 05-07-2017 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 AC028_RS05810 ae8b205553f262fa46c43f45e9bb3d4f 142 Gene3D G3DSA:2.20.25.10 4 48 1.2E-22 T 05-07-2017 AC028_RS05810 ae8b205553f262fa46c43f45e9bb3d4f 142 Pfam PF02566 OsmC-like protein 44 139 3.0E-19 T 05-07-2017 IPR003718 OsmC/Ohr family AC028_RS05810 ae8b205553f262fa46c43f45e9bb3d4f 142 Gene3D G3DSA:3.30.300.20 49 141 2.0E-37 T 05-07-2017 IPR015946 K homology domain-like, alpha/beta AC028_RS02005 cf9d0928121337c32f45bfc2d99402ef 264 Pfam PF05690 Thiazole biosynthesis protein ThiG 12 258 9.4E-113 T 05-07-2017 AC028_RS02005 cf9d0928121337c32f45bfc2d99402ef 264 SUPERFAMILY SSF110399 8 250 9.29E-90 T 05-07-2017 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AC028_RS02005 cf9d0928121337c32f45bfc2d99402ef 264 Hamap MF_00443 Thiazole synthase [thiG]. 9 264 42.943 T 05-07-2017 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AC028_RS02005 cf9d0928121337c32f45bfc2d99402ef 264 Gene3D G3DSA:3.20.20.70 18 239 5.8E-57 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS11485 355a54c04668d6bff29841417b89c1e7 260 SUPERFAMILY SSF52540 35 222 1.27E-28 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11485 355a54c04668d6bff29841417b89c1e7 260 Gene3D G3DSA:3.40.50.300 3 227 1.2E-95 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS11485 355a54c04668d6bff29841417b89c1e7 260 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 4 226 3.2E-105 T 05-07-2017 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 AC028_RS11485 355a54c04668d6bff29841417b89c1e7 260 PIRSF PIRSF028756 1 253 5.3E-116 T 05-07-2017 IPR016898 Polyphosphate kinase 2 AC028_RS11485 355a54c04668d6bff29841417b89c1e7 260 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 4 227 5.3E-94 T 05-07-2017 IPR022488 Polyphosphate kinase-2-related AC028_RS12630 e0b88c1f12c9a50ee1503a575377cb36 248 Gene3D G3DSA:3.20.20.450 20 237 1.8E-51 T 05-07-2017 IPR001633 EAL domain AC028_RS12630 e0b88c1f12c9a50ee1503a575377cb36 248 SUPERFAMILY SSF141868 20 237 3.01E-58 T 05-07-2017 IPR001633 EAL domain AC028_RS12630 e0b88c1f12c9a50ee1503a575377cb36 248 Pfam PF00563 EAL domain 21 236 3.3E-49 T 05-07-2017 IPR001633 EAL domain AC028_RS12630 e0b88c1f12c9a50ee1503a575377cb36 248 SMART SM00052 12 241 1.9E-29 T 05-07-2017 IPR001633 EAL domain AC028_RS07665 433470995177a62ad9b0b926a7e8c719 423 Gene3D G3DSA:2.40.50.100 193 264 2.9E-13 T 05-07-2017 AC028_RS07665 433470995177a62ad9b0b926a7e8c719 423 SUPERFAMILY SSF51230 196 265 6.41E-13 T 05-07-2017 IPR011053 Single hybrid motif AC028_RS07665 433470995177a62ad9b0b926a7e8c719 423 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 233 336 2.2E-17 T 05-07-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AC028_RS12130 dbeaa1e16064a15106232cae1ec0a519 150 Pfam PF00075 RNase H 2 140 2.6E-46 T 05-07-2017 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AC028_RS12130 dbeaa1e16064a15106232cae1ec0a519 150 Gene3D G3DSA:3.30.420.10 2 140 6.2E-55 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS12130 dbeaa1e16064a15106232cae1ec0a519 150 SUPERFAMILY SSF53098 2 138 3.79E-54 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS12130 dbeaa1e16064a15106232cae1ec0a519 150 Hamap MF_00042 Ribonuclease H [rnhA]. 1 149 36.466 T 05-07-2017 IPR022892 Ribonuclease H GO:0004523 AC028_RS19215 e6038e457ff45d9663fc20a924f2e2c0 240 Gene3D G3DSA:2.120.10.30 1 228 8.6E-27 T 05-07-2017 IPR011042 Six-bladed beta-propeller, TolB-like AC028_RS19215 e6038e457ff45d9663fc20a924f2e2c0 240 SUPERFAMILY SSF63825 1 234 6.15E-28 T 05-07-2017 AC028_RS09075 1871a0b2d7e735d5d15c95d861a86442 187 Pfam PF12762 ISXO2-like transposase domain 4 152 9.5E-34 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS09075 1871a0b2d7e735d5d15c95d861a86442 187 SMART SM01126 4 152 9.9E-50 T 05-07-2017 IPR024445 ISXO2-like transposase domain AC028_RS02620 4daabb3037ef09f33a66e935ee431090 73 TIGRFAM TIGR02449 TIGR02449: TIGR02449 family protein 9 73 5.9E-31 T 05-07-2017 IPR012662 Conserved hypothetical protein CHP02449 AC028_RS08705 9e64e38407f72ec61f956f07d9d561dd 208 SUPERFAMILY SSF53597 3 88 8.69E-26 T 05-07-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AC028_RS08705 9e64e38407f72ec61f956f07d9d561dd 208 SUPERFAMILY SSF53597 118 207 8.69E-26 T 05-07-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AC028_RS08705 9e64e38407f72ec61f956f07d9d561dd 208 Pfam PF01872 RibD C-terminal domain 4 200 5.8E-23 T 05-07-2017 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AC028_RS08705 9e64e38407f72ec61f956f07d9d561dd 208 Gene3D G3DSA:3.40.430.10 4 207 1.9E-25 T 05-07-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AC028_RS09335 50233e6cc112435cb67147ab059d6744 495 Gene3D G3DSA:1.20.1250.20 307 468 1.3E-13 T 05-07-2017 AC028_RS09335 50233e6cc112435cb67147ab059d6744 495 Gene3D G3DSA:1.20.1250.20 230 271 1.3E-13 T 05-07-2017 AC028_RS09335 50233e6cc112435cb67147ab059d6744 495 Gene3D G3DSA:1.20.1250.20 19 211 1.8E-9 T 05-07-2017 AC028_RS09335 50233e6cc112435cb67147ab059d6744 495 SUPERFAMILY SSF103473 304 434 2.35E-29 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS09335 50233e6cc112435cb67147ab059d6744 495 SUPERFAMILY SSF103473 11 263 2.35E-29 T 05-07-2017 IPR020846 Major facilitator superfamily domain AC028_RS09335 50233e6cc112435cb67147ab059d6744 495 Pfam PF13347 MFS/sugar transport protein 15 277 1.5E-54 T 05-07-2017 AC028_RS09335 50233e6cc112435cb67147ab059d6744 495 Pfam PF13347 MFS/sugar transport protein 305 473 1.9E-30 T 05-07-2017 AC028_RS21750 38500494c33a3a17b03c8bee459c3613 216 Gene3D G3DSA:3.40.30.10 9 212 1.3E-47 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS21750 38500494c33a3a17b03c8bee459c3613 216 Pfam PF02630 SCO1/SenC 52 190 1.1E-21 T 05-07-2017 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS21750 38500494c33a3a17b03c8bee459c3613 216 SUPERFAMILY SSF52833 47 211 9.34E-41 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS07660 1460967e1983966a4aa760868cf99f09 423 Gene3D G3DSA:1.20.1600.10 28 413 4.5E-41 T 05-07-2017 AC028_RS07660 1460967e1983966a4aa760868cf99f09 423 Pfam PF02321 Outer membrane efflux protein 234 410 6.3E-9 T 05-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AC028_RS07660 1460967e1983966a4aa760868cf99f09 423 Pfam PF02321 Outer membrane efflux protein 30 211 8.5E-15 T 05-07-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AC028_RS07660 1460967e1983966a4aa760868cf99f09 423 SUPERFAMILY SSF56954 2 414 8.63E-54 T 05-07-2017 AC028_RS19225 8298fd1381af467c299033ce5863ad9a 210 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 05-07-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AC028_RS19225 8298fd1381af467c299033ce5863ad9a 210 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 191 2.3E-52 T 05-07-2017 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 AC028_RS19225 8298fd1381af467c299033ce5863ad9a 210 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 71 1.2E-17 T 05-07-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AC028_RS19225 8298fd1381af467c299033ce5863ad9a 210 PIRSF PIRSF000847 1 200 8.8E-44 T 05-07-2017 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 AC028_RS16605 ea224654bf4c8e215709621c8eb3374a 191 Gene3D G3DSA:3.40.80.10 18 184 6.9E-34 T 05-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AC028_RS16605 ea224654bf4c8e215709621c8eb3374a 191 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 28 172 5.3E-16 T 05-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AC028_RS16605 ea224654bf4c8e215709621c8eb3374a 191 SMART SM00644 20 162 1.3E-19 T 05-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AC028_RS16605 ea224654bf4c8e215709621c8eb3374a 191 SUPERFAMILY SSF55846 23 186 1.7E-34 T 05-07-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AC028_RS05695 d95364cf6877aa2774565d7cb11a8215 386 SUPERFAMILY SSF55469 170 383 1.57E-26 T 05-07-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AC028_RS05695 d95364cf6877aa2774565d7cb11a8215 386 TIGRFAM TIGR04511 SagB_rel_DH_2: putative peptide maturation dehydrogenase 3 377 6.2E-164 T 05-07-2017 IPR030965 Putative peptide maturation dehydrogenase AC028_RS05695 d95364cf6877aa2774565d7cb11a8215 386 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 193 364 4.5E-40 T 05-07-2017 IPR020051 SagB-type dehydrogenase domain AC028_RS05695 d95364cf6877aa2774565d7cb11a8215 386 Gene3D G3DSA:3.40.109.10 168 367 2.8E-26 T 05-07-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AC028_RS05695 d95364cf6877aa2774565d7cb11a8215 386 Pfam PF00881 Nitroreductase family 177 365 2.4E-23 T 05-07-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 AC028_RS08025 5181897a00f21e3f6ef61bcb4f275d1f 300 SUPERFAMILY SSF51735 16 286 5.75E-35 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS08025 5181897a00f21e3f6ef61bcb4f275d1f 300 Gene3D G3DSA:3.40.50.720 10 224 1.9E-25 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS08025 5181897a00f21e3f6ef61bcb4f275d1f 300 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 73 5.2E-6 T 05-07-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AC028_RS08025 5181897a00f21e3f6ef61bcb4f275d1f 300 Pfam PF01370 NAD dependent epimerase/dehydratase family 127 211 8.9E-6 T 05-07-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AC028_RS01280 653dbf14bd6514dea5e608870c1b4543 504 Gene3D G3DSA:3.40.50.1820 103 373 1.7E-14 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS01280 653dbf14bd6514dea5e608870c1b4543 504 PIRSF PIRSF014728 1 498 1.6E-249 T 05-07-2017 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type AC028_RS01280 653dbf14bd6514dea5e608870c1b4543 504 SUPERFAMILY SSF53474 312 374 4.3E-10 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS01280 653dbf14bd6514dea5e608870c1b4543 504 SUPERFAMILY SSF53474 203 259 4.3E-10 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS01280 653dbf14bd6514dea5e608870c1b4543 504 SUPERFAMILY SSF53474 164 174 4.3E-10 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS01280 653dbf14bd6514dea5e608870c1b4543 504 Pfam PF10142 PhoPQ-activated pathogenicity-related protein 49 421 7.2E-131 T 05-07-2017 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type AC028_RS01215 3296666d17aeecbb4c8fa1dc839ff398 174 Gene3D G3DSA:1.25.40.10 63 131 1.0E-6 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS01215 3296666d17aeecbb4c8fa1dc839ff398 174 SUPERFAMILY SSF48452 65 159 4.55E-7 T 05-07-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AC028_RS22440 54d7f600d069b8b326368fbd9044f2aa 877 SUPERFAMILY SSF52540 460 618 1.45E-20 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS22440 54d7f600d069b8b326368fbd9044f2aa 877 SUPERFAMILY SSF52540 662 801 1.45E-20 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS22440 54d7f600d069b8b326368fbd9044f2aa 877 Gene3D G3DSA:3.40.50.300 509 626 5.0E-5 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS22440 54d7f600d069b8b326368fbd9044f2aa 877 Gene3D G3DSA:3.40.50.300 709 787 5.0E-5 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS22440 54d7f600d069b8b326368fbd9044f2aa 877 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 242 447 2.1E-18 T 05-07-2017 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 AC028_RS17140 9abc7df30c3083591afaf247beb58e24 283 Pfam PF02706 Chain length determinant protein 5 134 3.4E-9 T 05-07-2017 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 AC028_RS07250 677da1035b4b73fdef2b57dcdfd0e148 548 SUPERFAMILY SSF100950 29 274 3.61E-32 T 05-07-2017 AC028_RS07250 677da1035b4b73fdef2b57dcdfd0e148 548 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 5 548 1.8E-298 T 05-07-2017 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 AC028_RS07250 677da1035b4b73fdef2b57dcdfd0e148 548 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 4 548 1.6E-301 T 05-07-2017 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 AC028_RS07250 677da1035b4b73fdef2b57dcdfd0e148 548 SUPERFAMILY SSF100950 222 381 2.26E-21 T 05-07-2017 AC028_RS07250 677da1035b4b73fdef2b57dcdfd0e148 548 SUPERFAMILY SSF100950 409 479 2.26E-21 T 05-07-2017 AC028_RS07250 677da1035b4b73fdef2b57dcdfd0e148 548 Gene3D G3DSA:3.40.1080.10 30 228 9.2E-9 T 05-07-2017 AC028_RS07510 3dd7d25a63a05f2ca6772271c79b950a 440 SUPERFAMILY SSF54826 3 138 1.6E-36 T 05-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS07510 3dd7d25a63a05f2ca6772271c79b950a 440 Pfam PF13378 Enolase C-terminal domain-like 202 415 4.0E-60 T 05-07-2017 IPR029065 Enolase C-terminal domain-like AC028_RS07510 3dd7d25a63a05f2ca6772271c79b950a 440 Gene3D G3DSA:3.30.390.10 2 178 4.0E-83 T 05-07-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AC028_RS07510 3dd7d25a63a05f2ca6772271c79b950a 440 SUPERFAMILY SSF51604 184 431 4.32E-69 T 05-07-2017 IPR029065 Enolase C-terminal domain-like AC028_RS07510 3dd7d25a63a05f2ca6772271c79b950a 440 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 34 136 1.4E-6 T 05-07-2017 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AC028_RS07510 3dd7d25a63a05f2ca6772271c79b950a 440 SMART SM00922 199 295 3.3E-26 T 05-07-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AC028_RS07510 3dd7d25a63a05f2ca6772271c79b950a 440 Gene3D G3DSA:3.20.20.120 182 426 9.9E-87 T 05-07-2017 IPR029065 Enolase C-terminal domain-like AC028_RS05670 edac15c9328e6d91572d7cccd6351abf 538 Gene3D G3DSA:1.20.1220.12 421 531 1.4E-28 T 05-07-2017 AC028_RS05670 edac15c9328e6d91572d7cccd6351abf 538 SUPERFAMILY SSF51645 26 537 1.18E-182 T 05-07-2017 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AC028_RS05670 edac15c9328e6d91572d7cccd6351abf 538 PIRSF PIRSF001363 11 538 3.8E-231 T 05-07-2017 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AC028_RS05670 edac15c9328e6d91572d7cccd6351abf 538 Pfam PF01274 Malate synthase 27 537 1.1E-192 T 05-07-2017 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AC028_RS05670 edac15c9328e6d91572d7cccd6351abf 538 Gene3D G3DSA:3.20.20.360 79 420 2.1E-118 T 05-07-2017 AC028_RS05670 edac15c9328e6d91572d7cccd6351abf 538 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 31 537 1.4E-217 T 05-07-2017 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AC028_RS19860 e34d9c81052096cdc0ebc1c34951f8c0 267 Gene3D G3DSA:3.60.110.10 1 261 5.4E-58 T 05-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AC028_RS19860 e34d9c81052096cdc0ebc1c34951f8c0 267 Pfam PF00795 Carbon-nitrogen hydrolase 7 245 5.1E-28 T 05-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AC028_RS19860 e34d9c81052096cdc0ebc1c34951f8c0 267 SUPERFAMILY SSF56317 1 260 5.89E-58 T 05-07-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AC028_RS18415 d3e8a76d50d729567d5490feaa67d2c4 175 Pfam PF03748 Flagellar basal body-associated protein FliL 73 175 1.2E-23 T 05-07-2017 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AC028_RS21230 687219561956624d395baf05598f904a 264 Pfam PF04230 Polysaccharide pyruvyl transferase 74 209 3.0E-15 T 05-07-2017 IPR007345 Polysaccharide pyruvyl transferase AC028_RS14625 a67a8a4f080b3e0d06fdecf909018817 191 Pfam PF11454 Protein of unknown function (DUF3016) 42 180 1.5E-51 T 05-07-2017 IPR021557 Protein of unknown function DUF3016 AC028_RS04915 f760f4d638a23b765dbd5d1ffecb06c7 444 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 442 3.6E-152 T 05-07-2017 IPR010263 Type VI secretion protein, VC_A0114 AC028_RS04915 f760f4d638a23b765dbd5d1ffecb06c7 444 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 4 443 3.8E-160 T 05-07-2017 IPR010263 Type VI secretion protein, VC_A0114 AC028_RS14660 9b91c91a89326c4a566da05ee77e1d43 355 SUPERFAMILY SSF53335 169 345 1.47E-21 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS14660 9b91c91a89326c4a566da05ee77e1d43 355 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 277 283 - T 05-07-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AC028_RS14660 9b91c91a89326c4a566da05ee77e1d43 355 Gene3D G3DSA:3.40.50.150 172 347 1.2E-20 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS14660 9b91c91a89326c4a566da05ee77e1d43 355 Pfam PF05175 Methyltransferase small domain 177 345 1.1E-50 T 05-07-2017 IPR007848 Methyltransferase small domain GO:0008168 AC028_RS18425 0db47f056cb5c953c498661544172123 151 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 138 4.8E-28 T 05-07-2017 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AC028_RS18425 0db47f056cb5c953c498661544172123 151 Pfam PF02050 Flagellar FliJ protein 19 137 4.9E-23 T 05-07-2017 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AC028_RS14740 08418ca906b739e52a51678aed9e212e 185 Pfam PF07301 Protein of unknown function (DUF1453) 14 127 2.8E-5 T 05-07-2017 IPR009916 Protein of unknown function DUF1453 AC028_RS10285 d7249893187f6b4aee605a7003599c2d 342 Gene3D G3DSA:3.40.50.10490 184 342 6.1E-40 T 05-07-2017 AC028_RS10285 d7249893187f6b4aee605a7003599c2d 342 SUPERFAMILY SSF53697 11 340 2.63E-75 T 05-07-2017 AC028_RS10285 d7249893187f6b4aee605a7003599c2d 342 Pfam PF01380 SIS domain 204 289 1.7E-14 T 05-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 AC028_RS10285 d7249893187f6b4aee605a7003599c2d 342 Pfam PF01380 SIS domain 49 166 4.6E-18 T 05-07-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 AC028_RS10285 d7249893187f6b4aee605a7003599c2d 342 Gene3D G3DSA:3.40.50.10490 6 165 1.4E-29 T 05-07-2017 AC028_RS05600 2709e36385bf7074e86968f58caed61a 180 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 104 161 3.0E-17 T 05-07-2017 IPR018637 Domain of unknown function DUF2059 AC028_RS04310 83c1ca66744f876bf3fb14fc99279654 44 Pfam PF08085 Entericidin EcnA/B family 22 42 3.3E-9 T 05-07-2017 IPR012556 Entericidin A/B GO:0009636|GO:0016020 AC028_RS12920 e6cb75a6586bfcd386822458e02e170f 289 SMART SM00244 58 222 3.7E-10 T 05-07-2017 IPR001107 Band 7 domain AC028_RS12920 e6cb75a6586bfcd386822458e02e170f 289 Pfam PF01145 SPFH domain / Band 7 family 62 231 1.7E-25 T 05-07-2017 IPR001107 Band 7 domain AC028_RS12920 e6cb75a6586bfcd386822458e02e170f 289 SUPERFAMILY SSF117892 96 224 7.06E-13 T 05-07-2017 IPR001107 Band 7 domain AC028_RS21890 dcee92ebe43ad5318122dbc59e6fb0b9 414 Pfam PF04235 Protein of unknown function (DUF418) 245 401 1.3E-40 T 05-07-2017 IPR007349 Domain of unknown function DUF418 AC028_RS01915 fa758ca5af0d5bb65734327c12cdbd34 132 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 75 129 6.4E-19 T 05-07-2017 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 AC028_RS09805 2e9a52094191f0e764a5eaf992fd2336 222 Gene3D G3DSA:3.40.50.1820 11 218 3.5E-64 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS09805 2e9a52094191f0e764a5eaf992fd2336 222 Pfam PF02230 Phospholipase/Carboxylesterase 14 216 4.4E-44 T 05-07-2017 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 AC028_RS09805 2e9a52094191f0e764a5eaf992fd2336 222 SUPERFAMILY SSF53474 9 218 1.04E-48 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS01780 7e113a69d9d188892f8619279951266e 455 SUPERFAMILY SSF53756 2 454 1.51E-140 T 05-07-2017 AC028_RS01780 7e113a69d9d188892f8619279951266e 455 Gene3D G3DSA:3.40.50.2000 240 437 2.6E-73 T 05-07-2017 AC028_RS01780 7e113a69d9d188892f8619279951266e 455 Gene3D G3DSA:3.40.50.2000 1 239 1.7E-62 T 05-07-2017 AC028_RS01780 7e113a69d9d188892f8619279951266e 455 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 453 2.4E-181 T 05-07-2017 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 AC028_RS01780 7e113a69d9d188892f8619279951266e 455 Pfam PF00982 Glycosyltransferase family 20 16 453 6.4E-121 T 05-07-2017 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 AC028_RS16980 9530eb610e02c6d32422a91fe6e05fad 201 PIRSF PIRSF024492 21 201 7.1E-75 T 05-07-2017 IPR014519 Uncharacterised conserved protein UCP024492 AC028_RS16980 9530eb610e02c6d32422a91fe6e05fad 201 Pfam PF04343 Protein of unknown function, DUF488 35 156 2.0E-28 T 05-07-2017 IPR007438 Protein of unknown function DUF488 AC028_RS08865 1a4a03fc1f99f37776de77e268a79c3f 444 SUPERFAMILY SSF111283 6 438 1.29E-90 T 05-07-2017 AC028_RS08865 1a4a03fc1f99f37776de77e268a79c3f 444 Pfam PF01523 Putative modulator of DNA gyrase 25 310 9.4E-48 T 05-07-2017 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AC028_RS14125 eaafb61d8947ac5928e25eda2107b344 176 Pfam PF09572 XamI restriction endonuclease 57 175 9.2E-28 T 05-07-2017 IPR019072 Restriction endonuclease, type II, XamI GO:0003677|GO:0009036|GO:0009307 AC028_RS13300 4ae454a9a992dd56797dcbad99f2a683 463 SUPERFAMILY SSF51905 311 368 6.48E-28 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS13300 4ae454a9a992dd56797dcbad99f2a683 463 SUPERFAMILY SSF51905 1 191 6.48E-28 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS13300 4ae454a9a992dd56797dcbad99f2a683 463 Gene3D G3DSA:3.50.50.60 115 197 4.2E-20 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS13300 4ae454a9a992dd56797dcbad99f2a683 463 Gene3D G3DSA:3.50.50.60 5 81 4.2E-20 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS13300 4ae454a9a992dd56797dcbad99f2a683 463 Gene3D G3DSA:3.50.50.60 307 350 4.2E-20 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS09145 04fa0b8b9f9b6c500f3337d482d5925d 263 Pfam PF01863 Protein of unknown function DUF45 43 247 2.5E-46 T 05-07-2017 IPR002725 Protein of unknown function DUF45 AC028_RS03970 ec591c4bc636d9b6abfd1e0d9443fe26 297 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 18 93 1.2E-15 T 05-07-2017 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AC028_RS03970 ec591c4bc636d9b6abfd1e0d9443fe26 297 SUPERFAMILY SSF89069 17 84 1.26E-14 T 05-07-2017 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AC028_RS03210 0cc65c33c71826b8b2ebdd45541d58e0 405 Pfam PF00482 Type II secretion system (T2SS), protein F 275 396 5.8E-26 T 05-07-2017 IPR018076 Type II secretion system F domain AC028_RS03210 0cc65c33c71826b8b2ebdd45541d58e0 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 1.8E-30 T 05-07-2017 IPR018076 Type II secretion system F domain AC028_RS03210 0cc65c33c71826b8b2ebdd45541d58e0 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 2.8E-22 T 05-07-2017 IPR003004 GspF/PilC family AC028_RS03210 0cc65c33c71826b8b2ebdd45541d58e0 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 2.8E-22 T 05-07-2017 IPR003004 GspF/PilC family AC028_RS03210 0cc65c33c71826b8b2ebdd45541d58e0 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 2.8E-22 T 05-07-2017 IPR003004 GspF/PilC family AC028_RS03210 0cc65c33c71826b8b2ebdd45541d58e0 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 2.8E-22 T 05-07-2017 IPR003004 GspF/PilC family AC028_RS03210 0cc65c33c71826b8b2ebdd45541d58e0 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 05-07-2017 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AC028_RS08440 7f2130816052fb49404778d27f095821 172 Gene3D G3DSA:2.60.120.10 65 123 3.5E-5 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS08440 7f2130816052fb49404778d27f095821 172 SUPERFAMILY SSF51182 68 153 7.13E-8 T 05-07-2017 IPR011051 RmlC-like cupin domain AC028_RS18850 25e18cea1f729306801bf9082ea87b3a 860 Gene3D G3DSA:2.40.170.20 148 481 4.3E-59 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS18850 25e18cea1f729306801bf9082ea87b3a 860 Gene3D G3DSA:2.40.170.20 529 859 4.3E-59 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS18850 25e18cea1f729306801bf9082ea87b3a 860 Gene3D G3DSA:2.170.130.10 51 147 3.0E-13 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS18850 25e18cea1f729306801bf9082ea87b3a 860 SUPERFAMILY SSF56935 17 213 1.3E-81 T 05-07-2017 AC028_RS18850 25e18cea1f729306801bf9082ea87b3a 860 SUPERFAMILY SSF56935 245 454 1.3E-81 T 05-07-2017 AC028_RS18850 25e18cea1f729306801bf9082ea87b3a 860 SUPERFAMILY SSF56935 498 859 1.3E-81 T 05-07-2017 AC028_RS18850 25e18cea1f729306801bf9082ea87b3a 860 Pfam PF00593 TonB dependent receptor 592 859 2.4E-31 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS18850 25e18cea1f729306801bf9082ea87b3a 860 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 144 1.5E-13 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS18850 25e18cea1f729306801bf9082ea87b3a 860 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 24 859 3.0E-215 T 05-07-2017 IPR010104 Bacterial TonB-dependent receptor AC028_RS15970 a93b04994b05ddfea46e3a6c1e907e8b 420 Pfam PF08014 Domain of unknown function (DUF1704) 48 182 1.7E-23 T 05-07-2017 IPR012548 Protein of unknown function DUF1704 AC028_RS15970 a93b04994b05ddfea46e3a6c1e907e8b 420 SMART SM01154 40 351 8.0E-6 T 05-07-2017 IPR012548 Protein of unknown function DUF1704 AC028_RS10095 1d53a6975e1086829598484d685847b6 366 Gene3D G3DSA:3.20.20.70 146 263 3.0E-5 T 05-07-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 AC028_RS10095 1d53a6975e1086829598484d685847b6 366 SUPERFAMILY SSF102114 45 262 2.09E-6 T 05-07-2017 AC028_RS14275 4efee75168d37d8fba74c1f649379880 422 Pfam PF12040 Domain of unknown function (DUF3526) 274 416 1.2E-35 T 05-07-2017 IPR021913 Protein of unknown function DUF3526 AC028_RS04540 cca79870c6a11afaac8326d7a36616e7 229 Pfam PF07277 SapC 3 219 1.7E-65 T 05-07-2017 IPR010836 SapC AC028_RS21775 9eb84515e755f440f0cb541e2f9fa175 206 SUPERFAMILY SSF55811 12 196 5.28E-46 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS21775 9eb84515e755f440f0cb541e2f9fa175 206 Gene3D G3DSA:3.90.79.10 14 195 1.7E-53 T 05-07-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 AC028_RS21775 9eb84515e755f440f0cb541e2f9fa175 206 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 194 1.1E-42 T 05-07-2017 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 AC028_RS21775 9eb84515e755f440f0cb541e2f9fa175 206 Pfam PF00293 NUDIX domain 51 174 8.8E-9 T 05-07-2017 IPR000086 NUDIX hydrolase domain GO:0016787 AC028_RS01335 5a68e540f6a4bbdf08ef1304ef8adeef 236 Pfam PF01479 S4 domain 6 41 1.4E-6 T 05-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AC028_RS01335 5a68e540f6a4bbdf08ef1304ef8adeef 236 SUPERFAMILY SSF55174 5 50 6.41E-10 T 05-07-2017 AC028_RS01335 5a68e540f6a4bbdf08ef1304ef8adeef 236 SUPERFAMILY SSF55120 65 234 3.7E-18 T 05-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS01335 5a68e540f6a4bbdf08ef1304ef8adeef 236 Gene3D G3DSA:3.10.290.10 3 66 6.1E-16 T 05-07-2017 IPR002942 RNA-binding S4 domain GO:0003723 AC028_RS14925 02d39abe8df406a56c63c74242c6ec74 362 Pfam PF05275 Copper resistance protein B precursor (CopB) 158 362 4.5E-84 T 05-07-2017 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 AC028_RS21275 9d12a1af76cc036a2cdde7dbb1319ee4 450 Pfam PF13807 G-rich domain on putative tyrosine kinase 365 438 8.9E-21 T 05-07-2017 IPR032807 Tyrosine kinase, G-rich domain AC028_RS21275 9d12a1af76cc036a2cdde7dbb1319ee4 450 Pfam PF02706 Chain length determinant protein 1 170 1.0E-21 T 05-07-2017 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 AC028_RS10185 ff3a8e7d5424f575ace95aabe738d93e 885 Gene3D G3DSA:2.40.170.20 270 485 2.2E-40 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS10185 ff3a8e7d5424f575ace95aabe738d93e 885 Gene3D G3DSA:2.40.170.20 527 885 2.2E-40 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS10185 ff3a8e7d5424f575ace95aabe738d93e 885 Gene3D G3DSA:2.170.130.10 54 172 1.3E-11 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS10185 ff3a8e7d5424f575ace95aabe738d93e 885 Pfam PF14905 Outer membrane protein beta-barrel family 537 865 6.3E-19 T 05-07-2017 AC028_RS10185 ff3a8e7d5424f575ace95aabe738d93e 885 SUPERFAMILY SSF56935 55 192 3.33E-71 T 05-07-2017 AC028_RS10185 ff3a8e7d5424f575ace95aabe738d93e 885 SUPERFAMILY SSF56935 263 885 3.33E-71 T 05-07-2017 AC028_RS10185 ff3a8e7d5424f575ace95aabe738d93e 885 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 169 5.0E-10 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS06960 1e6bd20f2e97185151dbb30967d9daca 318 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 6 312 5.4E-121 T 05-07-2017 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AC028_RS06960 1e6bd20f2e97185151dbb30967d9daca 318 Pfam PF03741 Integral membrane protein TerC family 80 282 2.9E-54 T 05-07-2017 IPR005496 Integral membrane protein TerC GO:0016021 AC028_RS14455 90fdf9bc01ebfbacf4aeb284787a6c55 404 Gene3D G3DSA:3.40.50.720 277 320 6.7E-21 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS14455 90fdf9bc01ebfbacf4aeb284787a6c55 404 Gene3D G3DSA:3.40.50.720 124 190 6.7E-21 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS14455 90fdf9bc01ebfbacf4aeb284787a6c55 404 Gene3D G3DSA:3.40.50.720 64 118 6.5E-17 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS14455 90fdf9bc01ebfbacf4aeb284787a6c55 404 SUPERFAMILY SSF51971 126 342 1.0E-19 T 05-07-2017 AC028_RS14455 90fdf9bc01ebfbacf4aeb284787a6c55 404 Pfam PF01266 FAD dependent oxidoreductase 126 402 4.2E-19 T 05-07-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AC028_RS14455 90fdf9bc01ebfbacf4aeb284787a6c55 404 Gene3D G3DSA:3.30.9.10 321 401 1.8E-11 T 05-07-2017 AC028_RS14455 90fdf9bc01ebfbacf4aeb284787a6c55 404 ProSitePatterns PS00677 D-amino acid oxidases signature. 91 109 - T 05-07-2017 IPR006181 D-amino acid oxidase, conserved site GO:0003884|GO:0055114 Reactome: R-HSA-389661 AC028_RS13425 a33e4f523a166a52906e511142b8937a 443 Gene3D G3DSA:3.40.50.2000 259 399 1.1E-14 T 05-07-2017 AC028_RS13425 a33e4f523a166a52906e511142b8937a 443 SUPERFAMILY SSF53756 14 420 1.51E-81 T 05-07-2017 AC028_RS13425 a33e4f523a166a52906e511142b8937a 443 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 14 76 1.9E-9 T 05-07-2017 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AC028_RS13425 a33e4f523a166a52906e511142b8937a 443 Gene3D G3DSA:3.40.50.2000 14 258 5.2E-62 T 05-07-2017 AC028_RS08820 75844892dc87513eb3cc4ab5b864b87b 88 SUPERFAMILY SSF55961 4 73 1.65E-8 T 05-07-2017 AC028_RS08820 75844892dc87513eb3cc4ab5b864b87b 88 Gene3D G3DSA:3.30.530.20 3 63 1.4E-7 T 05-07-2017 IPR023393 START-like domain AC028_RS20620 0540d53bf2ac218fdf1fc053bc671056 303 Gene3D G3DSA:1.10.3720.10 13 292 4.4E-54 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS20620 0540d53bf2ac218fdf1fc053bc671056 303 SUPERFAMILY SSF161098 13 297 5.23E-57 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS20620 0540d53bf2ac218fdf1fc053bc671056 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 297 4.9E-19 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS02730 573eafaa20c34564f52bf256815f24bf 205 Gene3D G3DSA:3.40.50.1000 6 190 5.4E-24 T 05-07-2017 IPR023214 HAD-like domain AC028_RS02730 573eafaa20c34564f52bf256815f24bf 205 SUPERFAMILY SSF56784 9 196 3.12E-25 T 05-07-2017 IPR023214 HAD-like domain AC028_RS02730 573eafaa20c34564f52bf256815f24bf 205 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 141 186 1.6E-9 T 05-07-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AC028_RS16170 6f789bb5270491350d018fa3e0f151cb 131 Pfam PF04355 SmpA / OmlA family 28 98 2.6E-21 T 05-07-2017 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AC028_RS16170 6f789bb5270491350d018fa3e0f151cb 131 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 118 30.911 T 05-07-2017 IPR026592 Outer membrane protein assembly factor BamE AC028_RS06090 4fee0f4bb21cb295edecfee5c82c9a0e 318 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 25 317 3.0E-100 T 05-07-2017 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 AC028_RS06090 4fee0f4bb21cb295edecfee5c82c9a0e 318 Hamap MF_00070 2-keto-3-deoxygluconate permease [kdgT]. 1 318 35.804 T 05-07-2017 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 AC028_RS06090 4fee0f4bb21cb295edecfee5c82c9a0e 318 Pfam PF03812 2-keto-3-deoxygluconate permease 3 312 6.7E-111 T 05-07-2017 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 AC028_RS06090 4fee0f4bb21cb295edecfee5c82c9a0e 318 TIGRFAM TIGR00793 kdgT: 2-keto-3-deoxygluconate transporter 1 312 2.2E-143 T 05-07-2017 IPR018395 2-keto-3-deoxygluconate permease, subgroup GO:0008643|GO:0015649|GO:0016021|GO:0046411 AC028_RS17270 1b76ad80fcc70ef44e40b1ebc84843c2 121 Hamap MF_00599 Cell division protein FtsB [ftsB]. 2 93 35.159 T 05-07-2017 IPR023081 Cell division protein FtsB AC028_RS17270 1b76ad80fcc70ef44e40b1ebc84843c2 121 Pfam PF04977 Septum formation initiator 14 92 6.9E-30 T 05-07-2017 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 AC028_RS01455 d3ef03a0b4be4418139304a88b2082ac 180 SUPERFAMILY SSF53474 1 178 3.31E-16 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS01455 d3ef03a0b4be4418139304a88b2082ac 180 Pfam PF12697 Alpha/beta hydrolase family 1 124 3.3E-6 T 05-07-2017 IPR000073 Alpha/beta hydrolase fold-1 AC028_RS01455 d3ef03a0b4be4418139304a88b2082ac 180 Gene3D G3DSA:3.40.50.1820 1 177 3.1E-14 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS08325 7b0454de5b15228770c59a0ddc40ac6e 125 SUPERFAMILY SSF47413 3 66 7.17E-12 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS08325 7b0454de5b15228770c59a0ddc40ac6e 125 Gene3D G3DSA:1.10.260.40 4 66 4.4E-16 T 05-07-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AC028_RS08325 7b0454de5b15228770c59a0ddc40ac6e 125 SMART SM00530 7 63 2.2E-8 T 05-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AC028_RS08325 7b0454de5b15228770c59a0ddc40ac6e 125 Pfam PF01381 Helix-turn-helix 9 55 6.9E-9 T 05-07-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AC028_RS10335 12ab4152cdec73701c575336dc4fbffd 271 Gene3D G3DSA:3.40.30.10 81 263 1.2E-50 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS10335 12ab4152cdec73701c575336dc4fbffd 271 Pfam PF01323 DSBA-like thioredoxin domain 150 256 7.5E-9 T 05-07-2017 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AC028_RS10335 12ab4152cdec73701c575336dc4fbffd 271 SUPERFAMILY SSF52833 81 261 1.06E-35 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS05140 bc1a67da42a4dbc3fc7dedaa89f0fa37 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 417 6.8E-104 T 05-07-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AC028_RS05140 bc1a67da42a4dbc3fc7dedaa89f0fa37 427 PIRSF PIRSF006066 1 427 4.4E-140 T 05-07-2017 IPR004681 TRAP transporter permease protein GO:0016021 AC028_RS05140 bc1a67da42a4dbc3fc7dedaa89f0fa37 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 2.9E-121 T 05-07-2017 IPR004681 TRAP transporter permease protein GO:0016021 AC028_RS18420 846a01a482dbbc9fd1227fe7e61015ab 430 Pfam PF02120 Flagellar hook-length control protein FliK 311 391 7.5E-24 T 05-07-2017 IPR021136 Flagellar hook-length control protein-like, C-terminal AC028_RS03300 55cb00df5859f92ffec5109c1f782db4 368 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 8 365 8.2E-117 T 05-07-2017 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 AC028_RS03300 55cb00df5859f92ffec5109c1f782db4 368 Pfam PF03739 Predicted permease YjgP/YjgQ family 10 365 9.9E-72 T 05-07-2017 IPR005495 Permease LptG/LptF-related GO:0016021 AC028_RS18975 05fc8534ac106699eccc929dc59ee302 198 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 55 77 - T 05-07-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AC028_RS18975 05fc8534ac106699eccc929dc59ee302 198 Pfam PF01066 CDP-alcohol phosphatidyltransferase 7 77 5.4E-14 T 05-07-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AC028_RS06325 fea8f318da1a9df2d222e1a756dd79e3 205 Pfam PF02698 DUF218 domain 49 192 1.0E-29 T 05-07-2017 IPR003848 Domain of unknown function DUF218 AC028_RS06325 fea8f318da1a9df2d222e1a756dd79e3 205 Gene3D G3DSA:3.40.50.620 43 175 1.2E-30 T 05-07-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AC028_RS16410 b132ddd3135c37c80a9b6a8f121a70c1 379 SUPERFAMILY SSF82282 28 56 7.85E-100 T 05-07-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AC028_RS16410 b132ddd3135c37c80a9b6a8f121a70c1 379 SUPERFAMILY SSF82282 89 374 7.85E-100 T 05-07-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AC028_RS16410 b132ddd3135c37c80a9b6a8f121a70c1 379 Gene3D G3DSA:3.20.20.330 26 56 3.0E-117 T 05-07-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AC028_RS16410 b132ddd3135c37c80a9b6a8f121a70c1 379 Gene3D G3DSA:3.20.20.330 89 376 3.0E-117 T 05-07-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AC028_RS16410 b132ddd3135c37c80a9b6a8f121a70c1 379 Pfam PF02574 Homocysteine S-methyltransferase 37 363 2.5E-94 T 05-07-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AC028_RS04715 53ab70eaa597c2db60e62545f64e0e60 86 Hamap MF_01866 Protein YcgL [ycgL]. 1 86 20.192 T 05-07-2017 IPR027354 YcgL domain AC028_RS04715 53ab70eaa597c2db60e62545f64e0e60 86 SUPERFAMILY SSF160191 1 75 2.35E-23 T 05-07-2017 AC028_RS04715 53ab70eaa597c2db60e62545f64e0e60 86 Pfam PF05166 YcgL domain 4 75 1.6E-24 T 05-07-2017 IPR027354 YcgL domain AC028_RS04715 53ab70eaa597c2db60e62545f64e0e60 86 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 5 75 1.0E-34 T 05-07-2017 IPR027354 YcgL domain AC028_RS21900 3ee5d526d75fa522ae024d27559a210e 192 Gene3D G3DSA:3.90.1720.10 65 191 1.4E-42 T 05-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain AC028_RS21900 3ee5d526d75fa522ae024d27559a210e 192 SUPERFAMILY SSF54001 65 191 3.68E-39 T 05-07-2017 AC028_RS21900 3ee5d526d75fa522ae024d27559a210e 192 Pfam PF00877 NlpC/P60 family 82 187 1.4E-27 T 05-07-2017 IPR000064 Endopeptidase, NLPC/P60 domain AC028_RS16515 1c4cfc3801241afe8a251aaf3edec337 135 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 83 132 4.0E-23 T 05-07-2017 IPR024572 Nickel/cobalt homeostasis protein RcnB AC028_RS16515 1c4cfc3801241afe8a251aaf3edec337 135 Pfam PF11776 Nickel/cobalt transporter regulator 82 129 9.8E-19 T 05-07-2017 IPR024572 Nickel/cobalt homeostasis protein RcnB AC028_RS07950 04e4c5767a15e151aaceac0456a55ad8 298 Pfam PF03301 Tryptophan 2,3-dioxygenase 208 281 5.6E-21 T 05-07-2017 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AC028_RS07950 04e4c5767a15e151aaceac0456a55ad8 298 Pfam PF03301 Tryptophan 2,3-dioxygenase 18 144 2.4E-41 T 05-07-2017 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AC028_RS07950 04e4c5767a15e151aaceac0456a55ad8 298 SUPERFAMILY SSF140959 23 282 6.67E-97 T 05-07-2017 AC028_RS07950 04e4c5767a15e151aaceac0456a55ad8 298 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 17 282 39.058 T 05-07-2017 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AC028_RS22450 3d96758732176741304fad492ced78c1 125 Pfam PF04956 TrbC/VIRB2 family 24 115 7.2E-21 T 05-07-2017 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AC028_RS00500 84cd54310264b4e1ee309ee8c8a7dd22 479 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 3.7E-18 T 05-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AC028_RS00500 84cd54310264b4e1ee309ee8c8a7dd22 479 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 475 7.6E-151 T 05-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AC028_RS00500 84cd54310264b4e1ee309ee8c8a7dd22 479 Pfam PF04963 Sigma-54 factor, core binding domain 113 306 4.7E-50 T 05-07-2017 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 AC028_RS00500 84cd54310264b4e1ee309ee8c8a7dd22 479 Pfam PF04552 Sigma-54, DNA binding domain 320 477 1.0E-63 T 05-07-2017 IPR007634 RNA polymerase sigma factor 54, DNA-binding AC028_RS00500 84cd54310264b4e1ee309ee8c8a7dd22 479 PRINTS PR00045 Sigma-54 factor signature 452 470 2.1E-26 T 05-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AC028_RS00500 84cd54310264b4e1ee309ee8c8a7dd22 479 PRINTS PR00045 Sigma-54 factor signature 394 405 2.1E-26 T 05-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AC028_RS00500 84cd54310264b4e1ee309ee8c8a7dd22 479 PRINTS PR00045 Sigma-54 factor signature 188 205 2.1E-26 T 05-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AC028_RS00500 84cd54310264b4e1ee309ee8c8a7dd22 479 PRINTS PR00045 Sigma-54 factor signature 378 390 2.1E-26 T 05-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AC028_RS00500 84cd54310264b4e1ee309ee8c8a7dd22 479 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 366 385 - T 05-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AC028_RS00500 84cd54310264b4e1ee309ee8c8a7dd22 479 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 457 464 - T 05-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AC028_RS00500 84cd54310264b4e1ee309ee8c8a7dd22 479 PIRSF PIRSF000774 1 479 7.5E-138 T 05-07-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AC028_RS09405 0bd53347e4e1b9641b976139e4c70e10 809 Pfam PF05819 NolX protein 36 297 3.6E-111 T 05-07-2017 IPR008718 NolX GO:0009877 AC028_RS09405 0bd53347e4e1b9641b976139e4c70e10 809 Pfam PF05819 NolX protein 240 623 1.1E-202 T 05-07-2017 IPR008718 NolX GO:0009877 AC028_RS19670 0fa5b73cf0c90b0da6fe9228fa1b62c8 303 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 10 259 3.2E-43 T 05-07-2017 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system AC028_RS18080 28e25b9bcf89f6cb3db7eec452d24483 198 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 18 169 29.617 T 05-07-2017 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 AC028_RS18080 28e25b9bcf89f6cb3db7eec452d24483 198 Pfam PF03975 CheD chemotactic sensory transduction 66 165 7.2E-33 T 05-07-2017 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 AC028_RS18080 28e25b9bcf89f6cb3db7eec452d24483 198 SUPERFAMILY SSF64438 24 169 1.65E-50 T 05-07-2017 IPR011324 Cytotoxic necrotizing factor-like, catalytic AC028_RS12825 8c57ff6e25b0b66659ce14543f8088a4 555 Gene3D G3DSA:3.40.720.10 389 537 5.4E-10 T 05-07-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AC028_RS12825 8c57ff6e25b0b66659ce14543f8088a4 555 Pfam PF00884 Sulfatase 247 533 1.2E-48 T 05-07-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AC028_RS12825 8c57ff6e25b0b66659ce14543f8088a4 555 Pfam PF08019 Domain of unknown function (DUF1705) 68 216 1.0E-46 T 05-07-2017 IPR012549 Domain of unknown function DUF1705 GO:0016021 AC028_RS12825 8c57ff6e25b0b66659ce14543f8088a4 555 SUPERFAMILY SSF53649 244 539 3.92E-19 T 05-07-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AC028_RS04550 8149cb29b80bfda095b56931f999de0e 521 Pfam PF04820 Tryptophan halogenase 16 465 1.4E-189 T 05-07-2017 IPR006905 Tryptophan halogenase AC028_RS04550 8149cb29b80bfda095b56931f999de0e 521 PIRSF PIRSF011396 9 502 5.6E-186 T 05-07-2017 IPR006905 Tryptophan halogenase AC028_RS04550 8149cb29b80bfda095b56931f999de0e 521 SUPERFAMILY SSF51905 325 425 6.24E-31 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS04550 8149cb29b80bfda095b56931f999de0e 521 SUPERFAMILY SSF51905 142 240 6.24E-31 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS04550 8149cb29b80bfda095b56931f999de0e 521 SUPERFAMILY SSF51905 15 98 6.24E-31 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS04550 8149cb29b80bfda095b56931f999de0e 521 Gene3D G3DSA:3.50.50.60 320 364 2.3E-47 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS04550 8149cb29b80bfda095b56931f999de0e 521 Gene3D G3DSA:3.50.50.60 12 83 2.3E-47 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS04550 8149cb29b80bfda095b56931f999de0e 521 Gene3D G3DSA:3.50.50.60 158 238 2.3E-47 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS11880 e4454db44b8538b5931b67413a57f860 402 Pfam PF00155 Aminotransferase class I and II 46 390 2.3E-64 T 05-07-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AC028_RS11880 e4454db44b8538b5931b67413a57f860 402 Gene3D G3DSA:3.40.640.10 61 281 8.1E-90 T 05-07-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AC028_RS11880 e4454db44b8538b5931b67413a57f860 402 SUPERFAMILY SSF53383 10 398 6.31E-117 T 05-07-2017 IPR015424 Pyridoxal phosphate-dependent transferase AC028_RS11880 e4454db44b8538b5931b67413a57f860 402 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 5 398 53.529 T 05-07-2017 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AC028_RS11880 e4454db44b8538b5931b67413a57f860 402 Gene3D G3DSA:3.90.1150.10 282 395 2.2E-31 T 05-07-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AC028_RS11880 e4454db44b8538b5931b67413a57f860 402 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 8 400 3.8E-226 T 05-07-2017 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 AC028_RS00110 83eb5e66cf39707a45f48a63b59823dd 416 Pfam PF05684 Protein of unknown function (DUF819) 17 412 2.2E-142 T 05-07-2017 IPR008537 Protein of unknown function DUF819 AC028_RS10745 8873693ad44726385f520734c2313969 181 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 4 181 2.7E-54 T 05-07-2017 IPR018636 Protein of unknown function DUF2058 AC028_RS09885 4c36feb5e9587e8fa59f2da07f209929 226 Pfam PF04340 Protein of unknown function, DUF484 7 226 6.5E-65 T 05-07-2017 IPR007435 Protein of unknown function DUF484 AC028_RS13510 bf03acf90cf2dbbedecf300dd2706c35 265 SUPERFAMILY SSF52540 1 252 2.19E-64 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS13510 bf03acf90cf2dbbedecf300dd2706c35 265 Gene3D G3DSA:3.40.50.300 3 255 1.2E-68 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS13510 bf03acf90cf2dbbedecf300dd2706c35 265 Pfam PF13614 AAA domain 3 177 9.1E-64 T 05-07-2017 IPR025669 AAA domain AC028_RS13930 5c3bb9be1540ddce79b16dc0be64147c 177 Pfam PF11304 Protein of unknown function (DUF3106) 10 93 2.7E-11 T 05-07-2017 IPR021455 Protein of unknown function DUF3106 AC028_RS22395 12d3f42f7f9ca3524d43b29a01a8e4f1 295 SUPERFAMILY SSF53955 87 176 3.42E-16 T 05-07-2017 IPR023346 Lysozyme-like domain AC028_RS22395 12d3f42f7f9ca3524d43b29a01a8e4f1 295 SUPERFAMILY SSF53955 17 59 3.42E-16 T 05-07-2017 IPR023346 Lysozyme-like domain AC028_RS22395 12d3f42f7f9ca3524d43b29a01a8e4f1 295 Gene3D G3DSA:1.10.530.10 34 176 2.3E-11 T 05-07-2017 AC028_RS22395 12d3f42f7f9ca3524d43b29a01a8e4f1 295 Pfam PF01464 Transglycosylase SLT domain 28 162 7.3E-14 T 05-07-2017 IPR008258 Transglycosylase SLT domain 1 AC028_RS00450 5538d89a0fa89ace8eda0ecf55085997 275 Pfam PF11306 Protein of unknown function (DUF3108) 40 272 3.1E-31 T 05-07-2017 IPR021457 Protein of unknown function DUF3108 AC028_RS02650 f41afef5caf055b2d43e42d52035daf7 149 Pfam PF02643 Uncharacterized ACR, COG1430 34 140 3.4E-31 T 05-07-2017 IPR003795 Protein of unknown function DUF192 AC028_RS20465 6c13845df8435147ab1e525f1c64386b 58 Pfam PF12244 Protein of unknown function (DUF3606) 4 57 5.4E-25 T 05-07-2017 IPR022037 Protein of unknown function DUF3606 AC028_RS19895 5747bfa590f246e277f4effcd2c83e63 645 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 636 3.2E-221 T 05-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19895 5747bfa590f246e277f4effcd2c83e63 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 355 372 7.7E-48 T 05-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19895 5747bfa590f246e277f4effcd2c83e63 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 398 417 7.7E-48 T 05-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19895 5747bfa590f246e277f4effcd2c83e63 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 7.7E-48 T 05-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19895 5747bfa590f246e277f4effcd2c83e63 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 7.7E-48 T 05-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19895 5747bfa590f246e277f4effcd2c83e63 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 627 640 7.7E-48 T 05-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19895 5747bfa590f246e277f4effcd2c83e63 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 7.7E-48 T 05-07-2017 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19895 5747bfa590f246e277f4effcd2c83e63 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 6.5E-93 T 05-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19895 5747bfa590f246e277f4effcd2c83e63 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 6.5E-93 T 05-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19895 5747bfa590f246e277f4effcd2c83e63 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 6.5E-93 T 05-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19895 5747bfa590f246e277f4effcd2c83e63 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 6.5E-93 T 05-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19895 5747bfa590f246e277f4effcd2c83e63 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 6.5E-93 T 05-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19895 5747bfa590f246e277f4effcd2c83e63 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 6.5E-93 T 05-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19895 5747bfa590f246e277f4effcd2c83e63 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 6.5E-93 T 05-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19895 5747bfa590f246e277f4effcd2c83e63 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 6.5E-93 T 05-07-2017 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19895 5747bfa590f246e277f4effcd2c83e63 645 Pfam PF01578 Cytochrome C assembly protein 89 295 1.0E-51 T 05-07-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AC028_RS19895 5747bfa590f246e277f4effcd2c83e63 645 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 634 6.2E-115 T 05-07-2017 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AC028_RS14910 a2cc9cecdcd4a221c422a99bdb226327 306 Gene3D G3DSA:1.10.101.10 107 180 2.9E-21 T 05-07-2017 IPR002477 Peptidoglycan binding-like AC028_RS14910 a2cc9cecdcd4a221c422a99bdb226327 306 Pfam PF01471 Putative peptidoglycan binding domain 114 175 1.4E-17 T 05-07-2017 IPR002477 Peptidoglycan binding-like AC028_RS14910 a2cc9cecdcd4a221c422a99bdb226327 306 SUPERFAMILY SSF47090 106 177 3.66E-18 T 05-07-2017 IPR002477 Peptidoglycan binding-like AC028_RS12835 50aacd5d401baf4d08b389e6683f3896 575 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 69 202 1.6E-17 T 05-07-2017 AC028_RS00605 45fad79dffcc83711197fad3104265f4 460 Pfam PF13520 Amino acid permease 36 419 2.7E-35 T 05-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AC028_RS00605 45fad79dffcc83711197fad3104265f4 460 PIRSF PIRSF006060 7 454 7.6E-63 T 05-07-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AC028_RS02370 cc1bcbfc24779e82bf42e275935cdc0a 239 Pfam PF01551 Peptidase family M23 121 227 8.2E-23 T 05-07-2017 IPR016047 Peptidase M23 AC028_RS02370 cc1bcbfc24779e82bf42e275935cdc0a 239 SUPERFAMILY SSF51261 82 232 6.8E-32 T 05-07-2017 IPR011055 Duplicated hybrid motif AC028_RS02370 cc1bcbfc24779e82bf42e275935cdc0a 239 Gene3D G3DSA:2.70.70.10 82 233 5.9E-33 T 05-07-2017 AC028_RS19460 febefddffbe8d7d0719435b4cb5fc3a3 112 Pfam PF12375 Phage protein 15 55 1.8E-6 T 05-07-2017 IPR021077 Bacteriophage phi-Lf, Orf112 AC028_RS01885 ac0e322cb7560d91ec6ff3af4c753d85 419 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 179 207 - T 05-07-2017 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AC028_RS01885 ac0e322cb7560d91ec6ff3af4c753d85 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 399 418 3.1E-17 T 05-07-2017 IPR003004 GspF/PilC family AC028_RS01885 ac0e322cb7560d91ec6ff3af4c753d85 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 80 92 3.1E-17 T 05-07-2017 IPR003004 GspF/PilC family AC028_RS01885 ac0e322cb7560d91ec6ff3af4c753d85 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 179 207 3.1E-17 T 05-07-2017 IPR003004 GspF/PilC family AC028_RS01885 ac0e322cb7560d91ec6ff3af4c753d85 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 383 397 3.1E-17 T 05-07-2017 IPR003004 GspF/PilC family AC028_RS01885 ac0e322cb7560d91ec6ff3af4c753d85 419 Pfam PF00482 Type II secretion system (T2SS), protein F 84 207 2.0E-31 T 05-07-2017 IPR018076 Type II secretion system F domain AC028_RS01885 ac0e322cb7560d91ec6ff3af4c753d85 419 Pfam PF00482 Type II secretion system (T2SS), protein F 288 410 1.3E-29 T 05-07-2017 IPR018076 Type II secretion system F domain AC028_RS18215 db55198561e1532a6010cd7c057e8e09 121 Pfam PF00072 Response regulator receiver domain 5 116 1.5E-27 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS18215 db55198561e1532a6010cd7c057e8e09 121 Gene3D G3DSA:3.40.50.2300 2 120 4.2E-37 T 05-07-2017 AC028_RS18215 db55198561e1532a6010cd7c057e8e09 121 SMART SM00448 3 116 1.2E-36 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS18215 db55198561e1532a6010cd7c057e8e09 121 SUPERFAMILY SSF52172 3 121 3.13E-36 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS19425 c648f862a4d5797e37ba66fb2bb0ca50 71 Gene3D G3DSA:3.90.180.10 16 60 9.6E-9 T 05-07-2017 IPR011032 GroES-like AC028_RS19425 c648f862a4d5797e37ba66fb2bb0ca50 71 SUPERFAMILY SSF50129 1 62 4.88E-11 T 05-07-2017 IPR011032 GroES-like AC028_RS00385 ab465406cf3d2a3c5742664d7b1d496c 287 Gene3D G3DSA:2.60.120.10 14 79 8.9E-43 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS00385 ab465406cf3d2a3c5742664d7b1d496c 287 Gene3D G3DSA:2.60.120.10 169 207 8.9E-43 T 05-07-2017 IPR014710 RmlC-like jelly roll fold AC028_RS00385 ab465406cf3d2a3c5742664d7b1d496c 287 SUPERFAMILY SSF51182 8 79 1.07E-20 T 05-07-2017 IPR011051 RmlC-like cupin domain AC028_RS00385 ab465406cf3d2a3c5742664d7b1d496c 287 SUPERFAMILY SSF51182 168 283 1.78E-21 T 05-07-2017 IPR011051 RmlC-like cupin domain AC028_RS00385 ab465406cf3d2a3c5742664d7b1d496c 287 Pfam PF05962 HutD 158 277 6.1E-18 T 05-07-2017 IPR010282 Uncharacterised protein family HutD/Ves AC028_RS00385 ab465406cf3d2a3c5742664d7b1d496c 287 Pfam PF05962 HutD 14 134 7.5E-24 T 05-07-2017 IPR010282 Uncharacterised protein family HutD/Ves AC028_RS13060 48569aecc990dc7437212cb931fc4507 208 Gene3D G3DSA:1.20.120.80 28 206 1.0E-52 T 05-07-2017 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13060 48569aecc990dc7437212cb931fc4507 208 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 29 208 3.3E-82 T 05-07-2017 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 AC028_RS13060 48569aecc990dc7437212cb931fc4507 208 Pfam PF00510 Cytochrome c oxidase subunit III 30 206 2.0E-13 T 05-07-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS13060 48569aecc990dc7437212cb931fc4507 208 SUPERFAMILY SSF81452 15 206 9.42E-57 T 05-07-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AC028_RS08305 fa4c9880df4e3d9b5eb003d3e5d17a1f 310 Pfam PF01148 Cytidylyltransferase family 43 306 1.4E-63 T 05-07-2017 AC028_RS02365 957b7bc5e383d6aead72b277f55c3e14 328 Gene3D G3DSA:2.40.440.10 191 326 1.1E-28 T 05-07-2017 AC028_RS02365 957b7bc5e383d6aead72b277f55c3e14 328 SUPERFAMILY SSF47090 55 106 4.24E-11 T 05-07-2017 IPR002477 Peptidoglycan binding-like AC028_RS02365 957b7bc5e383d6aead72b277f55c3e14 328 Pfam PF03734 L,D-transpeptidase catalytic domain 196 325 9.9E-18 T 05-07-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AC028_RS02365 957b7bc5e383d6aead72b277f55c3e14 328 Gene3D G3DSA:1.10.101.10 57 107 9.8E-10 T 05-07-2017 IPR002477 Peptidoglycan binding-like AC028_RS02365 957b7bc5e383d6aead72b277f55c3e14 328 Pfam PF01471 Putative peptidoglycan binding domain 56 105 2.2E-9 T 05-07-2017 IPR002477 Peptidoglycan binding-like AC028_RS02365 957b7bc5e383d6aead72b277f55c3e14 328 SUPERFAMILY SSF141523 193 325 7.32E-27 T 05-07-2017 AC028_RS00905 daf9a8c6fdc29f83c5b9e3623b539b1e 651 Pfam PF05170 AsmA family 27 550 3.2E-51 T 05-07-2017 IPR007844 AsmA AC028_RS03305 6dfcd9ea4ec55a8a9e7bc277137f284e 360 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 348 8.5E-70 T 05-07-2017 IPR005495 Permease LptG/LptF-related GO:0016021 AC028_RS03305 6dfcd9ea4ec55a8a9e7bc277137f284e 360 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 4 349 1.6E-112 T 05-07-2017 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 AC028_RS19885 67198fd2cff3b479557a8da12a1c83d7 56 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 1 42 9.5E-7 T 05-07-2017 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AC028_RS19885 67198fd2cff3b479557a8da12a1c83d7 56 Pfam PF04995 Heme exporter protein D (CcmD) 1 44 7.8E-11 T 05-07-2017 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AC028_RS17985 ade9c16f3cfc33ab3e8d30638a7c1584 306 PIRSF PIRSF015283 1 306 2.1E-98 T 05-07-2017 IPR016631 Regulatory, RpfE AC028_RS06150 1abfc2a282d95e8e97f45dc31661d62b 88 Pfam PF03692 Putative zinc- or iron-chelating domain 7 63 6.1E-5 T 05-07-2017 IPR005358 Putative zinc- or iron-chelating domain containing protein AC028_RS15005 d25255aa768ca1a2415610693300e3ac 283 Pfam PF00753 Metallo-beta-lactamase superfamily 134 273 2.4E-34 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS15005 d25255aa768ca1a2415610693300e3ac 283 Gene3D G3DSA:3.60.15.10 104 247 3.2E-27 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS15005 d25255aa768ca1a2415610693300e3ac 283 SUPERFAMILY SSF56281 39 276 1.54E-67 T 05-07-2017 IPR001279 Metallo-beta-lactamase AC028_RS14025 2bfa7205639420e33835ec0bd561a20f 573 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 63 223 1.7E-17 T 05-07-2017 AC028_RS08775 530efc2ed142071cc02b2b77f41b541f 1240 Gene3D G3DSA:3.30.2010.10 70 161 4.2E-10 T 05-07-2017 AC028_RS08775 530efc2ed142071cc02b2b77f41b541f 1240 Pfam PF01435 Peptidase family M48 133 346 2.2E-14 T 05-07-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AC028_RS10525 6fef7d91f4f0cfef6c443d0e79b21d00 597 PIRSF PIRSF001294 1 596 1.2E-227 T 05-07-2017 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AC028_RS10525 6fef7d91f4f0cfef6c443d0e79b21d00 597 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 202 594 3.0E-119 T 05-07-2017 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AC028_RS10525 6fef7d91f4f0cfef6c443d0e79b21d00 597 Pfam PF03814 Potassium-transporting ATPase A subunit 6 592 2.8E-210 T 05-07-2017 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AC028_RS10525 6fef7d91f4f0cfef6c443d0e79b21d00 597 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 594 27.512 T 05-07-2017 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AC028_RS09510 ef608dad39e0faabc3f191ff94917347 607 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 584 603 2.8E-26 T 05-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AC028_RS09510 ef608dad39e0faabc3f191ff94917347 607 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 370 390 2.8E-26 T 05-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AC028_RS09510 ef608dad39e0faabc3f191ff94917347 607 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 495 510 2.8E-26 T 05-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AC028_RS09510 ef608dad39e0faabc3f191ff94917347 607 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 198 215 2.8E-26 T 05-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AC028_RS09510 ef608dad39e0faabc3f191ff94917347 607 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 461 480 2.8E-26 T 05-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AC028_RS09510 ef608dad39e0faabc3f191ff94917347 607 Pfam PF00263 Bacterial type II and III secretion system protein 448 605 2.3E-39 T 05-07-2017 IPR004846 Type II/III secretion system GO:0009306 AC028_RS09510 ef608dad39e0faabc3f191ff94917347 607 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 322 606 3.4E-107 T 05-07-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AC028_RS09510 ef608dad39e0faabc3f191ff94917347 607 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 551 584 - T 05-07-2017 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AC028_RS09510 ef608dad39e0faabc3f191ff94917347 607 Pfam PF03958 Bacterial type II/III secretion system short domain 186 367 1.2E-17 T 05-07-2017 IPR005644 NolW-like AC028_RS03320 f03d5e94becce098136cd1c3be9e4a57 141 SUPERFAMILY SSF102400 1 140 5.1E-36 T 05-07-2017 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AC028_RS03320 f03d5e94becce098136cd1c3be9e4a57 141 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 137 5.6E-33 T 05-07-2017 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AC028_RS03320 f03d5e94becce098136cd1c3be9e4a57 141 Gene3D G3DSA:3.40.50.10110 1 140 8.7E-37 T 05-07-2017 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AC028_RS09675 8e2b911db04001875d73fd6eedcb4834 294 Pfam PF00892 EamA-like transporter family 150 277 9.3E-8 T 05-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AC028_RS09675 8e2b911db04001875d73fd6eedcb4834 294 Pfam PF00892 EamA-like transporter family 6 139 6.9E-14 T 05-07-2017 IPR000620 EamA domain GO:0016020|GO:0016021 AC028_RS09675 8e2b911db04001875d73fd6eedcb4834 294 SUPERFAMILY SSF103481 38 144 8.11E-16 T 05-07-2017 AC028_RS09675 8e2b911db04001875d73fd6eedcb4834 294 SUPERFAMILY SSF103481 192 280 1.96E-13 T 05-07-2017 AC028_RS08750 76fe910dcd6773c151d529178645d44a 146 SUPERFAMILY SSF55961 2 142 5.91E-39 T 05-07-2017 AC028_RS08750 76fe910dcd6773c151d529178645d44a 146 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 12 141 1.5E-22 T 05-07-2017 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 AC028_RS08750 76fe910dcd6773c151d529178645d44a 146 Gene3D G3DSA:3.30.530.20 3 142 2.6E-36 T 05-07-2017 IPR023393 START-like domain AC028_RS20015 7b24eba028b048c71b9655d876c27dd2 409 Pfam PF03389 MobA/MobL family 30 226 3.4E-46 T 05-07-2017 IPR005053 MobA/MobL protein AC028_RS22050 e8d4466f1922fcc9bc2753b2347e7503 205 Pfam PF06197 Protein of unknown function (DUF998) 14 195 1.4E-14 T 05-07-2017 IPR009339 Protein of unknown function DUF998 AC028_RS13115 1721213536df1767d6679f609c8126d1 131 Gene3D G3DSA:3.30.565.10 3 128 1.7E-13 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13115 1721213536df1767d6679f609c8126d1 131 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 128 7.7E-8 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13115 1721213536df1767d6679f609c8126d1 131 SUPERFAMILY SSF55874 26 128 1.08E-13 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS13115 1721213536df1767d6679f609c8126d1 131 SMART SM00387 33 131 0.0013 T 05-07-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain AC028_RS18775 fe92835d33335c16cb44dfde8f2d831d 133 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 10 128 16.945 T 05-07-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AC028_RS18775 fe92835d33335c16cb44dfde8f2d831d 133 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 12 123 1.8E-18 T 05-07-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AC028_RS21975 1889122e8111e7fcb6837ff66c980954 481 SUPERFAMILY SSF111283 23 479 1.23E-138 T 05-07-2017 AC028_RS21975 1889122e8111e7fcb6837ff66c980954 481 PIRSF PIRSF004919 21 480 6.0E-144 T 05-07-2017 IPR025502 TldD AC028_RS21975 1889122e8111e7fcb6837ff66c980954 481 Pfam PF01523 Putative modulator of DNA gyrase 40 331 1.8E-70 T 05-07-2017 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AC028_RS02085 a48d7417a1908a08846f97283a85348a 189 Pfam PF13302 Acetyltransferase (GNAT) domain 13 148 5.6E-20 T 05-07-2017 IPR000182 GNAT domain GO:0008080 AC028_RS02085 a48d7417a1908a08846f97283a85348a 189 Gene3D G3DSA:3.40.630.30 4 174 1.9E-40 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS02085 a48d7417a1908a08846f97283a85348a 189 SUPERFAMILY SSF55729 5 173 7.4E-36 T 05-07-2017 IPR016181 Acyl-CoA N-acyltransferase AC028_RS14300 36f900db36e325bea285b499b0590825 249 Pfam PF11828 Protein of unknown function (DUF3348) 5 247 4.4E-84 T 05-07-2017 IPR021783 Protein of unknown function DUF3348 AC028_RS11810 dfc684539032014bc29b5cb272cc5055 156 Pfam PF09900 Predicted membrane protein (DUF2127) 15 149 2.5E-36 T 05-07-2017 IPR021125 Protein of unknown function DUF2127 AC028_RS07625 836eddc1d31914c2be74a20e800a8da3 83 Pfam PF04226 Transglycosylase associated protein 33 79 5.7E-12 T 05-07-2017 IPR007341 Transglycosylase-associated protein GO:0016021 AC028_RS03930 dab36e6e38e230fafe77568f1d679a74 240 Pfam PF01627 Hpt domain 165 220 5.4E-5 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS03930 dab36e6e38e230fafe77568f1d679a74 240 Gene3D G3DSA:1.20.120.160 145 215 1.2E-7 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS03930 dab36e6e38e230fafe77568f1d679a74 240 SMART SM00448 11 122 1.2E-15 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS03930 dab36e6e38e230fafe77568f1d679a74 240 SUPERFAMILY SSF47226 108 219 8.77E-10 T 05-07-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AC028_RS03930 dab36e6e38e230fafe77568f1d679a74 240 Gene3D G3DSA:3.40.50.2300 11 131 5.8E-26 T 05-07-2017 AC028_RS03930 dab36e6e38e230fafe77568f1d679a74 240 SUPERFAMILY SSF52172 10 133 2.13E-27 T 05-07-2017 IPR011006 CheY-like superfamily AC028_RS03930 dab36e6e38e230fafe77568f1d679a74 240 Pfam PF00072 Response regulator receiver domain 14 123 1.8E-16 T 05-07-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AC028_RS07305 364a1816bd3bc091e617ea479e5b5dd0 139 Gene3D G3DSA:3.30.750.24 12 115 2.8E-24 T 05-07-2017 IPR002645 STAS domain AC028_RS07305 364a1816bd3bc091e617ea479e5b5dd0 139 SUPERFAMILY SSF52091 13 110 5.69E-19 T 05-07-2017 IPR002645 STAS domain AC028_RS07305 364a1816bd3bc091e617ea479e5b5dd0 139 Pfam PF01740 STAS domain 20 103 3.3E-12 T 05-07-2017 IPR002645 STAS domain AC028_RS04010 5fa5219c66c4fe2277e5334de16a4a4c 203 Pfam PF14470 Bacterial PH domain 28 121 2.9E-18 T 05-07-2017 AC028_RS04010 5fa5219c66c4fe2277e5334de16a4a4c 203 Pfam PF09851 Short C-terminal domain 175 200 6.6E-9 T 05-07-2017 IPR018649 SHOCT domain AC028_RS14190 abecbb2617e4291fb7b0ef62a5988de4 388 Pfam PF04984 Phage tail sheath protein 102 373 4.9E-37 T 05-07-2017 IPR007067 Tail sheath protein AC028_RS14190 abecbb2617e4291fb7b0ef62a5988de4 388 Pfam PF04984 Phage tail sheath protein 1 97 1.2E-10 T 05-07-2017 IPR007067 Tail sheath protein AC028_RS04735 d0bf4947725830aaba6c65402580a1ea 540 Pfam PF01494 FAD binding domain 6 190 1.7E-9 T 05-07-2017 IPR002938 FAD-binding domain GO:0071949 AC028_RS04735 d0bf4947725830aaba6c65402580a1ea 540 SUPERFAMILY SSF51905 306 391 3.74E-31 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS04735 d0bf4947725830aaba6c65402580a1ea 540 SUPERFAMILY SSF51905 6 191 3.74E-31 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS04735 d0bf4947725830aaba6c65402580a1ea 540 Gene3D G3DSA:3.50.50.60 5 264 2.8E-22 T 05-07-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AC028_RS00075 05e6bd719a86af8a261e0ddea226b225 74 Pfam PF04328 Protein of unknown function (DUF466) 14 74 7.5E-26 T 05-07-2017 IPR007423 Protein of unknown function DUF466 AC028_RS22385 ac5bb27de344237377b0e719f135399a 191 Gene3D G3DSA:3.30.870.10 45 187 1.4E-32 T 05-07-2017 AC028_RS22385 ac5bb27de344237377b0e719f135399a 191 Pfam PF13091 PLD-like domain 53 181 9.0E-23 T 05-07-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 AC028_RS22385 ac5bb27de344237377b0e719f135399a 191 SUPERFAMILY SSF56024 37 187 1.14E-35 T 05-07-2017 AC028_RS04510 39d820477a73668ea07fdcd2832d36b0 151 Gene3D G3DSA:3.30.110.70 68 100 4.1E-4 T 05-07-2017 IPR002765 Uncharacterised protein family UPF0145 AC028_RS05790 224fba7139d1f37e3a46ae90b0dd7a68 291 SUPERFAMILY SSF103481 37 137 3.27E-6 T 05-07-2017 AC028_RS05790 224fba7139d1f37e3a46ae90b0dd7a68 291 SUPERFAMILY SSF103481 184 287 1.03E-5 T 05-07-2017 AC028_RS10110 aa1741d6fbd8f926dbea9c6b729c25e2 126 Pfam PF05433 Glycine zipper 2TM domain 66 107 6.2E-10 T 05-07-2017 IPR008816 Glycine zipper 2TM domain GO:0019867 AC028_RS08125 71c1cad51be48fb3f6f6b0df72fb76d3 217 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 57 215 1.1E-38 T 05-07-2017 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 AC028_RS08125 71c1cad51be48fb3f6f6b0df72fb76d3 217 SUPERFAMILY SSF47240 56 191 1.72E-17 T 05-07-2017 IPR009078 Ferritin-like superfamily AC028_RS08125 71c1cad51be48fb3f6f6b0df72fb76d3 217 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 17 217 30.054 T 05-07-2017 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 AC028_RS08125 71c1cad51be48fb3f6f6b0df72fb76d3 217 Gene3D G3DSA:1.20.1260.10 64 190 1.4E-10 T 05-07-2017 IPR012347 Ferritin-related AC028_RS04255 f157bb34ac82eae4b4ea6e10436a333f 386 Pfam PF12704 MacB-like periplasmic core domain 23 229 4.7E-8 T 05-07-2017 IPR025857 MacB-like periplasmic core domain AC028_RS04255 f157bb34ac82eae4b4ea6e10436a333f 386 Pfam PF02687 FtsX-like permease family 263 377 1.2E-12 T 05-07-2017 IPR003838 ABC transporter permease protein domain GO:0016020 AC028_RS05745 4d7941d7d122848c15eda4a38e07be26 111 Pfam PF11804 Protein of unknown function (DUF3325) 4 104 1.6E-28 T 05-07-2017 IPR021762 Protein of unknown function DUF3325 AC028_RS15105 1687a9507cb3d76f7f14bdd97f79848f 261 Pfam PF01061 ABC-2 type transporter 13 221 8.5E-27 T 05-07-2017 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AC028_RS21215 803aa9d8606ed45b35361f5279ef1210 338 Pfam PF01963 TraB family 53 336 5.8E-26 T 05-07-2017 IPR002816 Pheromone shutdown, TraB AC028_RS08850 4740010d68d4c038b954b693b890197c 298 Pfam PF01882 Protein of unknown function DUF58 44 132 1.2E-20 T 05-07-2017 IPR002881 Domain of unknown function DUF58 AC028_RS00275 b4efac953fa15dc9690934d3ec884785 141 Gene3D G3DSA:4.10.520.10 45 139 1.4E-14 T 05-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AC028_RS00275 b4efac953fa15dc9690934d3ec884785 141 Pfam PF00216 Bacterial DNA-binding protein 45 139 1.1E-13 T 05-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AC028_RS00275 b4efac953fa15dc9690934d3ec884785 141 SMART SM00411 44 141 3.3E-6 T 05-07-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 AC028_RS00275 b4efac953fa15dc9690934d3ec884785 141 SUPERFAMILY SSF47729 44 139 8.39E-13 T 05-07-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AC028_RS00525 dbf968e2f61d1efdc6eeb6703461fb19 130 Pfam PF03610 PTS system fructose IIA component 4 103 8.9E-13 T 05-07-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AC028_RS00525 dbf968e2f61d1efdc6eeb6703461fb19 130 SUPERFAMILY SSF53062 4 124 1.44E-23 T 05-07-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AC028_RS00525 dbf968e2f61d1efdc6eeb6703461fb19 130 Gene3D G3DSA:3.40.50.510 4 124 1.8E-26 T 05-07-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AC028_RS12510 49d0bc17c14cbed0af9eda6322a9f2d7 102 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 99 2.8E-17 T 05-07-2017 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AC028_RS03160 a04cb7a05889ec7ce773b4b4a00284f5 279 SUPERFAMILY SSF53448 8 247 8.86E-14 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS03160 a04cb7a05889ec7ce773b4b4a00284f5 279 Gene3D G3DSA:3.90.550.10 8 218 2.3E-7 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS05595 913df63ef9e4714e918fed7a3f419049 244 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 56 70 - T 05-07-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS05595 913df63ef9e4714e918fed7a3f419049 244 SUPERFAMILY SSF55120 5 235 1.04E-54 T 05-07-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS05595 913df63ef9e4714e918fed7a3f419049 244 Pfam PF00849 RNA pseudouridylate synthase 17 168 3.2E-29 T 05-07-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AC028_RS13590 ee9e229f4c56841889e0e77a08e7f1bd 158 Pfam PF10003 Integral membrane protein (DUF2244) 18 150 5.4E-32 T 05-07-2017 IPR019253 Protein of unknown function DUF2244, transmembrane AC028_RS09485 03e8f79c022fb81c0e20c7864a3fed48 209 Pfam PF09502 Bacterial type III secretion protein (HrpB4) 5 203 7.7E-40 T 05-07-2017 IPR013393 Type III secretion protein HrpB4 AC028_RS09485 03e8f79c022fb81c0e20c7864a3fed48 209 TIGRFAM TIGR02560 HrpB4: type III secretion protein HrpB4 2 209 4.7E-77 T 05-07-2017 IPR013393 Type III secretion protein HrpB4 AC028_RS02095 924ec4943d129d518cea2359b3af8254 213 Pfam PF07791 Protein of unknown function (DUF1629) 12 133 2.0E-45 T 05-07-2017 IPR012433 Protein of unknown function DUF1629 AC028_RS19180 8dd461724893671a28d72194e592bdcb 154 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 135 1.2E-30 T 05-07-2017 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AC028_RS06385 59970a2a7a548cea38f78b3dd56b4e5f 114 Pfam PF13356 Domain of unknown function (DUF4102) 3 86 1.2E-17 T 05-07-2017 IPR025166 Domain of unknown function DUF4102 AC028_RS06635 3e2b8cc9d42603be771b9c5b8b98f2e9 778 Pfam PF04632 Fusaric acid resistance protein family 10 355 1.1E-104 T 05-07-2017 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AC028_RS06635 3e2b8cc9d42603be771b9c5b8b98f2e9 778 Pfam PF04632 Fusaric acid resistance protein family 369 757 1.1E-86 T 05-07-2017 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AC028_RS18645 332e46db14e8526becf10a61a343b483 135 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 05-07-2017 IPR019776 Flagellar basal body rod protein, conserved site AC028_RS18645 332e46db14e8526becf10a61a343b483 135 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 6 135 5.0E-44 T 05-07-2017 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 AC028_RS18645 332e46db14e8526becf10a61a343b483 135 Pfam PF00460 Flagella basal body rod protein 7 36 7.5E-9 T 05-07-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AC028_RS18645 332e46db14e8526becf10a61a343b483 135 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 88 131 5.9E-10 T 05-07-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AC028_RS10835 cc6146d349c0899c56f5044bd6010051 366 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 182 1.4E-27 T 05-07-2017 IPR007404 LexA-binding, inner membrane-associated putative hydrolase AC028_RS15395 e88f9274df71ebb6d112b7e6734e8c90 248 SUPERFAMILY SSF53098 33 223 1.03E-65 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS15395 e88f9274df71ebb6d112b7e6734e8c90 248 Pfam PF01351 Ribonuclease HII 38 216 3.9E-37 T 05-07-2017 IPR024567 Ribonuclease HII/HIII domain AC028_RS15395 e88f9274df71ebb6d112b7e6734e8c90 248 Gene3D G3DSA:3.30.420.10 36 178 5.4E-44 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS15395 e88f9274df71ebb6d112b7e6734e8c90 248 Hamap MF_00052_B Ribonuclease HII [rnhB]. 36 217 36.762 T 05-07-2017 IPR022898 Ribonuclease HII GO:0004523 AC028_RS00890 d027c05b6774ba855520919fb158577e 301 Gene3D G3DSA:2.70.70.10 142 276 6.7E-32 T 05-07-2017 AC028_RS00890 d027c05b6774ba855520919fb158577e 301 SUPERFAMILY SSF51261 154 276 4.24E-30 T 05-07-2017 IPR011055 Duplicated hybrid motif AC028_RS00890 d027c05b6774ba855520919fb158577e 301 Pfam PF01551 Peptidase family M23 176 276 3.8E-24 T 05-07-2017 IPR016047 Peptidase M23 AC028_RS08005 1c94131f30eec4886477058be4156a99 168 PIRSF PIRSF019239 8 168 1.4E-38 T 05-07-2017 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 AC028_RS08005 1c94131f30eec4886477058be4156a99 168 Pfam PF01899 Na+/H+ ion antiporter subunit 19 166 6.5E-42 T 05-07-2017 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 AC028_RS17725 7b3a92c0b33f798fcc5070a7eb77c3d8 94 Pfam PF13828 Domain of unknown function (DUF4190) 11 74 1.7E-22 T 05-07-2017 IPR025241 Domain of unknown function DUF4190 AC028_RS10245 0f10f643a6473eff6c9644b301b7c793 236 Pfam PF01203 Type II secretion system (T2SS), protein N 34 219 1.8E-15 T 05-07-2017 IPR022792 Type II secretion system, protein N AC028_RS22125 8bbb5198824c2035a9d25e5b8cbf3e14 267 Pfam PF14257 Domain of unknown function (DUF4349) 26 253 5.5E-28 T 05-07-2017 IPR025645 Domain of unknown function DUF4349 AC028_RS17920 0f0750a894c0cc39d9ad25db956c9b57 129 SUPERFAMILY SSF54593 2 128 1.51E-24 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS17920 0f0750a894c0cc39d9ad25db956c9b57 129 Gene3D G3DSA:3.10.180.10 3 126 7.3E-32 T 05-07-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AC028_RS17920 0f0750a894c0cc39d9ad25db956c9b57 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 122 7.3E-11 T 05-07-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AC028_RS17890 117dde7f5248753cdfb8bfd91e8052e5 99 Pfam PF09498 Protein of unknown function (DUF2388) 29 98 2.7E-25 T 05-07-2017 IPR012661 Conserved hypothetical protein CHP02448 AC028_RS17890 117dde7f5248753cdfb8bfd91e8052e5 99 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 2 99 1.0E-30 T 05-07-2017 IPR012661 Conserved hypothetical protein CHP02448 AC028_RS13895 673949a9c5c882feade8a0bdf36afac6 204 Pfam PF03458 UPF0126 domain 7 81 4.6E-20 T 05-07-2017 IPR005115 Uncharacterised domain UPF0126 AC028_RS13895 673949a9c5c882feade8a0bdf36afac6 204 Pfam PF03458 UPF0126 domain 93 164 3.9E-19 T 05-07-2017 IPR005115 Uncharacterised domain UPF0126 AC028_RS03415 0a1e45c0070252d7cf569758a3f02055 275 Pfam PF06067 Domain of unknown function (DUF932) 37 264 1.1E-59 T 05-07-2017 IPR026325 Protein of unknown function DUF932 AC028_RS15990 2eb1c9e5785c009e271ca04697ab4145 824 Pfam PF00593 TonB dependent receptor 584 822 5.4E-19 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS15990 2eb1c9e5785c009e271ca04697ab4145 824 Gene3D G3DSA:2.40.170.20 183 365 1.4E-54 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS15990 2eb1c9e5785c009e271ca04697ab4145 824 Gene3D G3DSA:2.40.170.20 399 824 1.4E-54 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS15990 2eb1c9e5785c009e271ca04697ab4145 824 Gene3D G3DSA:2.170.130.10 46 182 1.8E-27 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS15990 2eb1c9e5785c009e271ca04697ab4145 824 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 181 1.9E-17 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS15990 2eb1c9e5785c009e271ca04697ab4145 824 SUPERFAMILY SSF56935 573 824 1.05E-87 T 05-07-2017 AC028_RS15990 2eb1c9e5785c009e271ca04697ab4145 824 SUPERFAMILY SSF56935 45 544 1.05E-87 T 05-07-2017 AC028_RS15475 481070e5110c71bd695a02f9624706f8 239 SUPERFAMILY SSF49354 28 145 2.25E-15 T 05-07-2017 IPR008962 PapD-like AC028_RS15475 481070e5110c71bd695a02f9624706f8 239 Gene3D G3DSA:2.60.40.360 33 124 2.3E-8 T 05-07-2017 IPR008962 PapD-like AC028_RS15475 481070e5110c71bd695a02f9624706f8 239 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 33 124 1.2E-8 T 05-07-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AC028_RS10905 e4346c9488680a21c23f7ac3a3319ffe 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 277 5.5E-15 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS10905 e4346c9488680a21c23f7ac3a3319ffe 294 SUPERFAMILY SSF161098 88 275 2.09E-25 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS10905 e4346c9488680a21c23f7ac3a3319ffe 294 Gene3D G3DSA:1.10.3720.10 89 283 3.4E-17 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS14295 30f802bcd0fa3dd31e08a9d1ef280cc8 885 Pfam PF05650 Domain of unknown function (DUF802) 562 614 6.7E-11 T 05-07-2017 IPR008520 Domain of unknown function DUF802 AC028_RS14295 30f802bcd0fa3dd31e08a9d1ef280cc8 885 Pfam PF05650 Domain of unknown function (DUF802) 321 364 3.1E-8 T 05-07-2017 IPR008520 Domain of unknown function DUF802 AC028_RS14295 30f802bcd0fa3dd31e08a9d1ef280cc8 885 Pfam PF05650 Domain of unknown function (DUF802) 445 490 1.7E-6 T 05-07-2017 IPR008520 Domain of unknown function DUF802 AC028_RS14295 30f802bcd0fa3dd31e08a9d1ef280cc8 885 Pfam PF05650 Domain of unknown function (DUF802) 507 559 1.5E-16 T 05-07-2017 IPR008520 Domain of unknown function DUF802 AC028_RS14295 30f802bcd0fa3dd31e08a9d1ef280cc8 885 Pfam PF05650 Domain of unknown function (DUF802) 383 429 3.2E-7 T 05-07-2017 IPR008520 Domain of unknown function DUF802 AC028_RS14175 8cc4c0bd21ef3cee7223fba0520e04d7 37 Pfam PF06528 Phage P2 GpE 1 37 3.1E-22 T 05-07-2017 IPR009493 Burkholderia phage phiE202, Gp27 AC028_RS18435 81b9df5728cb09cbab4a726ff4567108 206 Pfam PF02108 Flagellar assembly protein FliH 73 193 2.2E-20 T 05-07-2017 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AC028_RS05545 8d5a88941983abad199c205dda1ce432 320 SUPERFAMILY SSF56601 3 319 7.24E-70 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS05545 8d5a88941983abad199c205dda1ce432 320 Pfam PF00144 Beta-lactamase 15 293 1.6E-30 T 05-07-2017 IPR001466 Beta-lactamase-related AC028_RS05545 8d5a88941983abad199c205dda1ce432 320 Gene3D G3DSA:3.40.710.10 13 309 4.8E-49 T 05-07-2017 IPR012338 Beta-lactamase/transpeptidase-like AC028_RS17640 0b329a308a036d2a3cf782120fc77f98 651 Pfam PF05787 Bacterial protein of unknown function (DUF839) 201 588 2.8E-16 T 05-07-2017 IPR008557 Protein of unknown function DUF839 AC028_RS13225 4c3e961f222643137f3f8007cb58505d 265 Gene3D G3DSA:3.20.10.10 131 229 7.2E-14 T 05-07-2017 AC028_RS13225 4c3e961f222643137f3f8007cb58505d 265 Pfam PF01063 Amino-transferase class IV 25 229 2.8E-33 T 05-07-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AC028_RS13225 4c3e961f222643137f3f8007cb58505d 265 SUPERFAMILY SSF56752 12 244 5.36E-39 T 05-07-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AC028_RS13225 4c3e961f222643137f3f8007cb58505d 265 Gene3D G3DSA:3.30.470.10 25 107 3.2E-8 T 05-07-2017 AC028_RS03190 c24579f86c8d74f620bc0445c381bc21 211 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 05-07-2017 IPR012902 Prokaryotic N-terminal methylation site AC028_RS11780 3444fac029e765a91f530041e82cc8ae 707 Gene3D G3DSA:2.40.170.20 149 707 1.2E-58 T 05-07-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AC028_RS11780 3444fac029e765a91f530041e82cc8ae 707 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 150 1.3E-4 T 05-07-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AC028_RS11780 3444fac029e765a91f530041e82cc8ae 707 SUPERFAMILY SSF56935 29 707 6.96E-79 T 05-07-2017 AC028_RS09605 861d9c5cfc540d35ea66a73776eed663 155 Pfam PF13548 Domain of unknown function (DUF4126) 9 147 1.3E-6 T 05-07-2017 IPR025196 Domain of unknown function DUF4126 AC028_RS19715 e3a7af654825c3e045a3f0421ccd645f 297 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 267 1.1E-106 T 05-07-2017 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 AC028_RS19715 e3a7af654825c3e045a3f0421ccd645f 297 SUPERFAMILY SSF53448 5 279 5.86E-63 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS19715 e3a7af654825c3e045a3f0421ccd645f 297 Gene3D G3DSA:3.90.550.10 6 277 5.4E-67 T 05-07-2017 IPR029044 Nucleotide-diphospho-sugar transferases AC028_RS19715 e3a7af654825c3e045a3f0421ccd645f 297 Pfam PF00483 Nucleotidyl transferase 12 268 3.5E-30 T 05-07-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AC028_RS09475 470539af70048abd873e6175b70bb36b 130 Pfam PF09487 Bacterial type III secretion protein (HrpB2) 18 130 2.0E-38 T 05-07-2017 IPR013391 Type III secretion protein HrpB2 AC028_RS09475 470539af70048abd873e6175b70bb36b 130 TIGRFAM TIGR02558 HrpB2: type III secretion protein HrpB2 11 130 2.0E-43 T 05-07-2017 IPR013391 Type III secretion protein HrpB2 AC028_RS04260 e44f93646ed32a2e1bca9b13a8a4a427 395 Pfam PF12704 MacB-like periplasmic core domain 29 233 1.4E-14 T 05-07-2017 IPR025857 MacB-like periplasmic core domain AC028_RS04260 e44f93646ed32a2e1bca9b13a8a4a427 395 Pfam PF02687 FtsX-like permease family 267 386 2.1E-11 T 05-07-2017 IPR003838 ABC transporter permease protein domain GO:0016020 AC028_RS00550 9dbc72b203f0b625555ccca857aed796 264 SUPERFAMILY SSF53474 39 259 5.22E-35 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS00550 9dbc72b203f0b625555ccca857aed796 264 Pfam PF00326 Prolyl oligopeptidase family 118 245 6.2E-10 T 05-07-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AC028_RS00550 9dbc72b203f0b625555ccca857aed796 264 Gene3D G3DSA:3.40.50.1820 3 261 2.2E-39 T 05-07-2017 IPR029058 Alpha/Beta hydrolase fold AC028_RS02755 fe12dd98c21fa51cd1d2008687332b07 695 Pfam PF01569 PAP2 superfamily 357 435 1.5E-10 T 05-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AC028_RS02755 fe12dd98c21fa51cd1d2008687332b07 695 SUPERFAMILY SSF48317 244 444 1.7E-26 T 05-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AC028_RS02755 fe12dd98c21fa51cd1d2008687332b07 695 Gene3D G3DSA:1.20.144.10 266 437 1.4E-15 T 05-07-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AC028_RS02755 fe12dd98c21fa51cd1d2008687332b07 695 Pfam PF14067 LssY C-terminus 498 607 1.6E-9 T 05-07-2017 IPR025902 LssY-like C-terminal domain AC028_RS02755 fe12dd98c21fa51cd1d2008687332b07 695 Pfam PF09335 SNARE associated Golgi protein 39 162 6.5E-19 T 05-07-2017 IPR032816 SNARE associated Golgi protein AC028_RS03690 16fe80098d6d4668d9bd709e22b0b843 235 Pfam PF06197 Protein of unknown function (DUF998) 31 208 9.9E-11 T 05-07-2017 IPR009339 Protein of unknown function DUF998 AC028_RS11445 0f5197eb45621afeeb4bf0eb282163fd 62 Gene3D G3DSA:3.20.20.80 19 55 5.1E-5 T 05-07-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AC028_RS03665 e117a8705e2173100582d8a35d9d34d5 426 Pfam PF02353 Mycolic acid cyclopropane synthetase 138 401 7.9E-79 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS03665 e117a8705e2173100582d8a35d9d34d5 426 PIRSF PIRSF003085 16 424 2.7E-117 T 05-07-2017 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AC028_RS03665 e117a8705e2173100582d8a35d9d34d5 426 Gene3D G3DSA:3.40.50.150 132 408 8.8E-95 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS03665 e117a8705e2173100582d8a35d9d34d5 426 SUPERFAMILY SSF53335 26 364 6.63E-75 T 05-07-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AC028_RS13065 ec91c890ee0ab9386d8648dcc524af4b 111 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 22 95 5.2E-15 T 05-07-2017 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 AC028_RS13065 ec91c890ee0ab9386d8648dcc524af4b 111 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 17 110 9.6E-38 T 05-07-2017 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 AC028_RS10965 909077c588fed05aa48f4e59cf4dd8eb 296 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 36 158 1.3E-36 T 05-07-2017 IPR007621 TPM domain AC028_RS19295 2f06840484cf7038f1c629eab05efdcd 272 Pfam PF02535 ZIP Zinc transporter 121 261 4.6E-20 T 05-07-2017 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 AC028_RS19295 2f06840484cf7038f1c629eab05efdcd 272 Pfam PF02535 ZIP Zinc transporter 10 105 2.5E-9 T 05-07-2017 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 AC028_RS19295 2f06840484cf7038f1c629eab05efdcd 272 Hamap MF_00548 Zinc transporter ZupT [zupT]. 9 268 34.445 T 05-07-2017 IPR023498 Zinc transporter ZupT AC028_RS11285 0f67276f55c889eda2bd6c6222acdc53 189 Gene3D G3DSA:3.40.50.880 1 178 2.5E-30 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS11285 0f67276f55c889eda2bd6c6222acdc53 189 SUPERFAMILY SSF52317 1 172 3.17E-32 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS11285 0f67276f55c889eda2bd6c6222acdc53 189 Pfam PF01965 DJ-1/PfpI family 3 167 6.9E-19 T 05-07-2017 IPR002818 DJ-1/PfpI AC028_RS13395 af7ef9b368687aa784a92025e43cecad 254 Pfam PF05598 Transposase domain (DUF772) 50 122 1.8E-19 T 05-07-2017 IPR008490 Transposase InsH, N-terminal AC028_RS13395 af7ef9b368687aa784a92025e43cecad 254 Pfam PF01609 Transposase DDE domain 135 239 1.0E-20 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS16885 940351eec731e7ff049ceab022672d6d 451 Pfam PF01979 Amidohydrolase family 46 425 2.5E-27 T 05-07-2017 IPR006680 Amidohydrolase-related GO:0016787 AC028_RS16885 940351eec731e7ff049ceab022672d6d 451 Gene3D G3DSA:3.20.20.140 53 392 4.4E-67 T 05-07-2017 AC028_RS16885 940351eec731e7ff049ceab022672d6d 451 SUPERFAMILY SSF51556 49 373 4.68E-69 T 05-07-2017 IPR032466 Metal-dependent hydrolase AC028_RS16885 940351eec731e7ff049ceab022672d6d 451 SUPERFAMILY SSF51338 359 448 3.96E-10 T 05-07-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AC028_RS16885 940351eec731e7ff049ceab022672d6d 451 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 1 449 8.6E-215 T 05-07-2017 IPR010252 Formiminoglutamate deiminase AC028_RS03790 6f01b7faf0c31c5aa48bc3bdadbf588d 57 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 8.0E-11 T 05-07-2017 IPR009760 Protein of unknown function DUF1328 GO:0005886 AC028_RS03790 6f01b7faf0c31c5aa48bc3bdadbf588d 57 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 52 20.7 T 05-07-2017 IPR009760 Protein of unknown function DUF1328 GO:0005886 AC028_RS03790 6f01b7faf0c31c5aa48bc3bdadbf588d 57 PIRSF PIRSF036466 1 55 1.6E-21 T 05-07-2017 IPR009760 Protein of unknown function DUF1328 GO:0005886 AC028_RS19535 dc5cd3f9d1a4e5f5e8f3806b4e2cbd4a 169 Pfam PF05974 Domain of unknown function (DUF892) 4 156 7.9E-49 T 05-07-2017 IPR010287 Domain of unknown function DUF892 AC028_RS19535 dc5cd3f9d1a4e5f5e8f3806b4e2cbd4a 169 Gene3D G3DSA:1.20.1260.10 1 160 1.8E-51 T 05-07-2017 IPR012347 Ferritin-related AC028_RS19535 dc5cd3f9d1a4e5f5e8f3806b4e2cbd4a 169 SUPERFAMILY SSF47240 1 156 2.38E-46 T 05-07-2017 IPR009078 Ferritin-like superfamily AC028_RS05035 0bd0ce324b1b97ca6bebea7ca1ed030b 639 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 47 283 7.4E-42 T 05-07-2017 IPR029486 Glycosyl-hydrolase 97, N-terminal domain AC028_RS09180 b0c143871c6326cc298d3db5e872bb57 654 SUPERFAMILY SSF52266 109 213 8.06E-70 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS09180 b0c143871c6326cc298d3db5e872bb57 654 SUPERFAMILY SSF52266 417 591 8.06E-70 T 05-07-2017 IPR013830 SGNH hydrolase-type esterase domain AC028_RS09180 b0c143871c6326cc298d3db5e872bb57 654 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 110 540 6.3E-87 T 05-07-2017 IPR005181 Sialate O-acetylesterase domain AC028_RS09180 b0c143871c6326cc298d3db5e872bb57 654 Gene3D G3DSA:2.60.120.260 264 365 2.6E-11 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS09180 b0c143871c6326cc298d3db5e872bb57 654 SUPERFAMILY SSF49785 250 369 3.77E-17 T 05-07-2017 IPR008979 Galactose-binding domain-like AC028_RS09180 b0c143871c6326cc298d3db5e872bb57 654 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 264 373 4.8E-7 T 05-07-2017 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AC028_RS09455 b3eddfa7a547efc0bb441084c6b55a05 212 TIGRFAM TIGR02557 HpaP: type III secretion protein HpaP 13 212 7.6E-79 T 05-07-2017 IPR013390 Type III secretion protein HpaP AC028_RS09455 b3eddfa7a547efc0bb441084c6b55a05 212 Pfam PF09483 Type III secretion protein (HpaP) 24 211 5.7E-40 T 05-07-2017 IPR013390 Type III secretion protein HpaP AC028_RS18875 3e3e563b567dfbc16001bcd34c765e1e 246 Pfam PF06884 Protein of unknown function (DUF1264) 44 212 4.6E-61 T 05-07-2017 IPR010686 Oil body-associated protein-like AC028_RS19445 db8bf0f589ef897453cdcfd91caee12e 58 Pfam PF01527 Transposase 7 56 5.3E-13 T 05-07-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AC028_RS21060 7fa9c3a218c7a06a3fd2b006f365c760 634 Pfam PF05960 Bacterial protein of unknown function (DUF885) 88 604 8.9E-153 T 05-07-2017 IPR010281 Protein of unknown function DUF885 AC028_RS15330 61c098ca9125c7ad707ca383d6b11f8d 258 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 58 236 4.0E-34 T 05-07-2017 IPR003744 Protein of unknown function DUF165 AC028_RS15330 61c098ca9125c7ad707ca383d6b11f8d 258 Pfam PF02592 Putative vitamin uptake transporter 62 234 7.8E-42 T 05-07-2017 IPR003744 Protein of unknown function DUF165 AC028_RS02450 9df659c55031a6e6c25302833f90d75b 311 Pfam PF01882 Protein of unknown function DUF58 59 142 5.9E-19 T 05-07-2017 IPR002881 Domain of unknown function DUF58 AC028_RS08015 d5f156b6237f5303b2de07e0acb1f95e 124 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 109 1.7E-22 T 05-07-2017 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AC028_RS19935 bb64fff466602c316428fac4a490ef9f 545 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 503 8.7E-174 T 05-07-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 AC028_RS22410 53ccd0d1349b046394449413ed8691ee 260 TIGRFAM TIGR02781 VirB9: P-type conjugative transfer protein VirB9 17 243 1.1E-67 T 05-07-2017 IPR014148 P-type conjugative transfer protein VirB9 AC028_RS22410 53ccd0d1349b046394449413ed8691ee 260 Pfam PF03524 Conjugal transfer protein 39 242 1.1E-62 T 05-07-2017 IPR010258 Conjugal transfer, TrbG/VirB9/CagX AC028_RS21770 34812ba0febd9fe1b7d216ea5c1f01a9 501 SUPERFAMILY SSF52540 4 384 3.71E-56 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS21770 34812ba0febd9fe1b7d216ea5c1f01a9 501 Gene3D G3DSA:3.40.50.300 5 109 3.6E-55 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS21770 34812ba0febd9fe1b7d216ea5c1f01a9 501 Gene3D G3DSA:3.40.50.300 205 379 3.6E-55 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS21770 34812ba0febd9fe1b7d216ea5c1f01a9 501 Pfam PF05872 Bacterial protein of unknown function (DUF853) 12 501 5.8E-215 T 05-07-2017 IPR033186 Helicase HerA-like C-terminal AC028_RS04135 e5576e3aa90bc48e307c2be670bb1038 197 Pfam PF13628 Domain of unknown function (DUF4142) 54 192 1.2E-14 T 05-07-2017 IPR025419 Domain of unknown function DUF4142 AC028_RS19640 525170692de49403b387d7b83066b051 202 Gene3D G3DSA:3.30.420.10 29 186 1.0E-43 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS19640 525170692de49403b387d7b83066b051 202 SUPERFAMILY SSF53098 28 191 2.78E-39 T 05-07-2017 IPR012337 Ribonuclease H-like domain GO:0003676 AC028_RS19640 525170692de49403b387d7b83066b051 202 Pfam PF13683 Integrase core domain 120 185 1.2E-28 T 05-07-2017 IPR001584 Integrase, catalytic core GO:0015074 AC028_RS19880 a49c140c336f898d00f3f1ea595dc2b0 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 103 123 3.3E-47 T 05-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19880 a49c140c336f898d00f3f1ea595dc2b0 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 65 85 3.3E-47 T 05-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19880 a49c140c336f898d00f3f1ea595dc2b0 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 207 231 3.3E-47 T 05-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19880 a49c140c336f898d00f3f1ea595dc2b0 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 159 185 3.3E-47 T 05-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19880 a49c140c336f898d00f3f1ea595dc2b0 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 124 144 3.3E-47 T 05-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19880 a49c140c336f898d00f3f1ea595dc2b0 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 48 65 3.3E-47 T 05-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19880 a49c140c336f898d00f3f1ea595dc2b0 250 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 48 228 7.4E-71 T 05-07-2017 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AC028_RS19880 a49c140c336f898d00f3f1ea595dc2b0 250 Pfam PF01578 Cytochrome C assembly protein 36 187 5.1E-29 T 05-07-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AC028_RS06605 ecfcd2b9e384eeb08fbfd1bf67135b7c 489 Pfam PF11855 Protein of unknown function (DUF3375) 11 480 3.6E-151 T 05-07-2017 IPR021804 Protein of unknown function DUF3375 AC028_RS09100 439f5878b3d3af0cd6bf783cf4e83d9d 250 SUPERFAMILY SSF52317 33 205 2.78E-39 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS09100 439f5878b3d3af0cd6bf783cf4e83d9d 250 Gene3D G3DSA:3.40.50.880 23 220 9.6E-48 T 05-07-2017 IPR029062 Class I glutamine amidotransferase-like AC028_RS09100 439f5878b3d3af0cd6bf783cf4e83d9d 250 Pfam PF00117 Glutamine amidotransferase class-I 54 193 2.3E-20 T 05-07-2017 IPR017926 Glutamine amidotransferase AC028_RS01710 1efc876236bb681d1bcc0f567cc97f9d 346 Gene3D G3DSA:3.20.20.100 21 329 5.6E-84 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS01710 1efc876236bb681d1bcc0f567cc97f9d 346 SUPERFAMILY SSF51430 14 329 2.23E-88 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS01710 1efc876236bb681d1bcc0f567cc97f9d 346 Pfam PF00248 Aldo/keto reductase family 28 329 2.4E-68 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS03180 cd005d4e4a8dd6df7a7234931fe6c262 373 Pfam PF05137 Fimbrial assembly protein (PilN) 287 358 1.2E-13 T 05-07-2017 IPR007813 Fimbrial assembly PilN AC028_RS03180 cd005d4e4a8dd6df7a7234931fe6c262 373 SUPERFAMILY SSF53067 79 185 1.55E-7 T 05-07-2017 AC028_RS13630 ef887694f4abc144799072ce1f6fc038 191 SUPERFAMILY SSF52833 79 189 1.99E-7 T 05-07-2017 IPR012336 Thioredoxin-like fold AC028_RS04120 633d705b93d9e471ac10b621f13b9e62 364 Pfam PF11379 Protein of unknown function (DUF3182) 15 358 1.3E-124 T 05-07-2017 IPR021519 Protein of unknown function DUF3182 AC028_RS16650 a62aa6bd100c966e3b851a69a61a2f84 183 Pfam PF11159 Protein of unknown function (DUF2939) 13 104 1.8E-25 T 05-07-2017 IPR021330 Protein of unknown function DUF2939 AC028_RS10520 e2b23184ec45b2dd85b21786c02893eb 30 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 4 30 6.7E-11 T 05-07-2017 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 AC028_RS07585 fd2b0d4158197c8a36227c112c6899c5 575 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 182 207 - T 05-07-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AC028_RS07585 fd2b0d4158197c8a36227c112c6899c5 575 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 67 492 1.3E-57 T 05-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AC028_RS07585 fd2b0d4158197c8a36227c112c6899c5 575 Pfam PF00474 Sodium:solute symporter family 67 492 1.6E-106 T 05-07-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AC028_RS10535 83ea6f6e71eb701cfad54eeb1f756686 209 PIRSF PIRSF001296 10 197 1.1E-67 T 05-07-2017 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AC028_RS10535 83ea6f6e71eb701cfad54eeb1f756686 209 Pfam PF02669 K+-transporting ATPase, c chain 16 193 7.9E-62 T 05-07-2017 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AC028_RS10535 83ea6f6e71eb701cfad54eeb1f756686 209 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 10 194 31.316 T 05-07-2017 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AC028_RS10535 83ea6f6e71eb701cfad54eeb1f756686 209 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 17 193 4.3E-48 T 05-07-2017 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AC028_RS15335 8e05b4432768bedc7cb601003486a9df 224 Pfam PF04367 Protein of unknown function (DUF502) 80 180 4.0E-27 T 05-07-2017 IPR007462 Protein of unknown function DUF502 AC028_RS12245 e35f7489ea7d924cb0603e79572bf71f 617 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 55 215 1.3E-14 T 05-07-2017 AC028_RS07115 2592524935f207c2a93031a9b7977231 390 SUPERFAMILY SSF56935 2 390 1.1E-77 T 05-07-2017 AC028_RS07115 2592524935f207c2a93031a9b7977231 390 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 2 390 1.6E-113 T 05-07-2017 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AC028_RS07115 2592524935f207c2a93031a9b7977231 390 Gene3D G3DSA:2.40.160.60 2 390 5.2E-103 T 05-07-2017 AC028_RS05555 2531c5a254d1aef817a3cb42e36a7af5 52 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 9.9E-16 T 05-07-2017 IPR009760 Protein of unknown function DUF1328 GO:0005886 AC028_RS05555 2531c5a254d1aef817a3cb42e36a7af5 52 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 51 20.278 T 05-07-2017 IPR009760 Protein of unknown function DUF1328 GO:0005886 AC028_RS05555 2531c5a254d1aef817a3cb42e36a7af5 52 PIRSF PIRSF036466 1 52 2.7E-22 T 05-07-2017 IPR009760 Protein of unknown function DUF1328 GO:0005886 AC028_RS03170 92dd5ff3223772bac355d24c35ef2c53 263 ProDom PD046566 PATHWAY N GENERAL SECRETION PRECURSOR SIGNAL MEMBRANE XPSN TRANSMEMBRANE INNER 1 165 3.0E-78 T 05-07-2017 AC028_RS10865 466987bd7a32cf088695fb3d1c921a43 432 Pfam PF07670 Nucleoside recognition 98 197 2.0E-7 T 05-07-2017 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AC028_RS10865 466987bd7a32cf088695fb3d1c921a43 432 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 13 86 4.2E-25 T 05-07-2017 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AC028_RS10865 466987bd7a32cf088695fb3d1c921a43 432 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 209 428 4.3E-75 T 05-07-2017 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AC028_RS06620 da9d602a0e01a52851690769e24aad38 72 Pfam PF07869 Protein of unknown function (DUF1656) 7 62 2.6E-21 T 05-07-2017 IPR012451 Protein of unknown function DUF1656 AC028_RS15055 bdd27b3e611ff4f289e7350f77d33109 329 SUPERFAMILY SSF56529 77 323 2.09E-54 T 05-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AC028_RS15055 bdd27b3e611ff4f289e7350f77d33109 329 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 323 7.7E-37 T 05-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AC028_RS15055 bdd27b3e611ff4f289e7350f77d33109 329 Gene3D G3DSA:3.90.850.10 69 310 3.4E-37 T 05-07-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AC028_RS01355 c181a1a6ef2d1a748632c913f6a62f8c 208 Pfam PF01810 LysE type translocator 16 201 3.6E-42 T 05-07-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 AC028_RS07055 8214b8223bc1d5609f779510896c78ad 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 115 236 6.8E-37 T 05-07-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AC028_RS10890 35cc1fabcd30e8a8afa32899b52c39e9 195 SUPERFAMILY SSF144064 2 182 7.06E-28 T 05-07-2017 AC028_RS21145 046da45b80cafebec9bae3585adbe019 284 SUPERFAMILY SSF82771 33 109 3.66E-8 T 05-07-2017 IPR000305 GIY-YIG nuclease superfamily AC028_RS21145 046da45b80cafebec9bae3585adbe019 284 SMART SM00465 32 110 2.2E-8 T 05-07-2017 IPR000305 GIY-YIG nuclease superfamily AC028_RS10650 14591685c9b6c1c19ace0cfd2c6d4c62 275 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 4 227 24.394 T 05-07-2017 IPR026579 Cell division protein FtsQ GO:0090529 AC028_RS10650 14591685c9b6c1c19ace0cfd2c6d4c62 275 Pfam PF03799 Cell division protein FtsQ 107 219 8.5E-22 T 05-07-2017 IPR005548 Cell division protein FtsQ/DivIB AC028_RS10650 14591685c9b6c1c19ace0cfd2c6d4c62 275 Pfam PF08478 POTRA domain, FtsQ-type 35 103 1.7E-18 T 05-07-2017 IPR013685 Polypeptide-transport-associated, FtsQ-type AC028_RS02195 a6f4421b2cf71d390e817cb896f66c4e 533 Pfam PF03929 PepSY-associated TM region 26 473 4.2E-57 T 05-07-2017 IPR005625 PepSY-associated TM protein AC028_RS20310 0163260f81f5850cb7421029835bd5b0 141 Gene3D G3DSA:3.30.370.10 40 130 9.3E-21 T 05-07-2017 IPR000468 Barstar (barnase inhibitor) AC028_RS20310 0163260f81f5850cb7421029835bd5b0 141 Pfam PF01337 Barstar (barnase inhibitor) 43 125 9.2E-23 T 05-07-2017 IPR000468 Barstar (barnase inhibitor) AC028_RS20310 0163260f81f5850cb7421029835bd5b0 141 SUPERFAMILY SSF52038 40 130 5.23E-23 T 05-07-2017 IPR000468 Barstar (barnase inhibitor) AC028_RS03785 163f5544e474f55f11c9ec8370f522b5 84 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 2.0E-30 T 05-07-2017 IPR021250 Protein of unknown function DUF2789 AC028_RS08880 4efb50ea02b1d15d18c91b8790b799c2 526 SUPERFAMILY SSF111283 25 519 1.31E-88 T 05-07-2017 AC028_RS08880 4efb50ea02b1d15d18c91b8790b799c2 526 Pfam PF01523 Putative modulator of DNA gyrase 41 367 4.7E-52 T 05-07-2017 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AC028_RS18990 5613b6d4aaaba9acc44451c69c801c20 65 Pfam PF04024 PspC domain 6 62 1.9E-19 T 05-07-2017 IPR007168 Phage shock protein, PspC, N-terminal AC028_RS00765 d8febdb344f51a2cbaefd4c03f5404aa 257 Pfam PF04012 PspA/IM30 family 2 228 6.9E-38 T 05-07-2017 IPR007157 PspA/IM30 AC028_RS17490 874f89690a4d879d0b11b7e22f4be4ef 292 Pfam PF05035 2-keto-3-deoxy-galactonokinase 5 284 1.7E-94 T 05-07-2017 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 AC028_RS01760 eb3f6168a06450368d650463922fc2ad 146 Pfam PF12098 Protein of unknown function (DUF3574) 37 146 1.1E-33 T 05-07-2017 IPR021957 Protein of unknown function DUF3574 AC028_RS12495 9e95650cd5eb6533b53440de452b414a 176 Gene3D G3DSA:1.10.10.10 13 57 1.8E-4 T 05-07-2017 IPR011991 Winged helix-turn-helix DNA-binding domain AC028_RS17925 5f667e8adb1c040254c1671adecceadf 265 SUPERFAMILY SSF52096 5 259 1.44E-64 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS17925 5f667e8adb1c040254c1671adecceadf 265 Gene3D G3DSA:1.10.12.10 204 260 1.2E-8 T 05-07-2017 IPR014748 Crontonase, C-terminal AC028_RS17925 5f667e8adb1c040254c1671adecceadf 265 Gene3D G3DSA:3.90.226.10 6 200 5.9E-53 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS17925 5f667e8adb1c040254c1671adecceadf 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 259 1.2E-45 T 05-07-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AC028_RS10045 2ca343abe2c58845768267e66150b212 353 Gene3D G3DSA:2.40.128.140 36 350 6.5E-107 T 05-07-2017 AC028_RS10045 2ca343abe2c58845768267e66150b212 353 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 44 350 1.2E-91 T 05-07-2017 IPR018707 Protein of unknown function DUF2219 AC028_RS03355 97076ca12fed3910b731355910757c4a 151 Gene3D G3DSA:3.40.50.10220 107 144 5.9E-5 T 05-07-2017 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS03355 97076ca12fed3910b731355910757c4a 151 SUPERFAMILY SSF102220 110 143 8.76E-5 T 05-07-2017 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AC028_RS20020 f732de5c9acae0ea646d03c46e936147 138 Pfam PF06412 Conjugal transfer protein TraD 63 104 1.2E-10 T 05-07-2017 IPR009444 Conjugal transfer, TraD, alpha-type GO:0000746 AC028_RS21025 9bdfd0e28cef293cf2190cb93f3cab73 785 SUPERFAMILY SSF48208 275 668 1.29E-16 T 05-07-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 AC028_RS13080 44b608f8d6f6a760d9f7bd3e8b07a5ce 128 Pfam PF05656 Protein of unknown function (DUF805) 11 126 1.2E-34 T 05-07-2017 IPR008523 Protein of unknown function DUF805 GO:0016021 AC028_RS01740 314d9cd0576b8e2672371ca1df777daa 272 Pfam PF11219 Protein of unknown function (DUF3014) 109 265 8.8E-54 T 05-07-2017 IPR021382 Protein of unknown function DUF3014 AC028_RS06080 0ce432be2225ddd1299ee291f39b996d 327 PIRSF PIRSF034367 1 327 3.0E-202 T 05-07-2017 IPR015004 Protein of unknown function DUF1852 AC028_RS06080 0ce432be2225ddd1299ee291f39b996d 327 Pfam PF08908 Domain of unknown function (DUF1852) 1 323 2.5E-181 T 05-07-2017 IPR015004 Protein of unknown function DUF1852 AC028_RS12665 3cc153b9fe68a5a807c8b1cd401456ab 438 Pfam PF05559 Protein of unknown function (DUF763) 6 348 2.1E-124 T 05-07-2017 IPR008482 Protein of unknown function DUF763 AC028_RS12950 4bee3f5f55555012cdc6eb93694197a0 170 Pfam PF09413 Putative prokaryotic signal transducing protein 1 75 5.5E-6 T 05-07-2017 IPR018551 Domain of unknown function DUF2007 AC028_RS21960 942b2624429fbf6709d109b646f3ce78 130 Pfam PF09685 Domain of unknown function (DUF4870) 24 129 1.8E-31 T 05-07-2017 IPR019109 Protein of unknown function DUF4870 AC028_RS01435 afb4872e97800abde7bac4d3001b79f9 634 Pfam PF02705 K+ potassium transporter 23 555 1.1E-213 T 05-07-2017 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 AC028_RS01435 afb4872e97800abde7bac4d3001b79f9 634 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 14 634 33.601 T 05-07-2017 IPR023051 Potassium uptake protein, low affinity, Kup AC028_RS14385 439e4eda239ae610bc4f004dd6b81d28 469 PIRSF PIRSF006446 1 456 8.5E-183 T 05-07-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 AC028_RS14385 439e4eda239ae610bc4f004dd6b81d28 469 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 434 2.0E-150 T 05-07-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 AC028_RS17180 c8776ea0b88ad90453e025e1dde327d9 352 SUPERFAMILY SSF53795 165 211 2.78E-9 T 05-07-2017 AC028_RS17180 c8776ea0b88ad90453e025e1dde327d9 352 Gene3D G3DSA:3.40.50.300 164 286 4.8E-14 T 05-07-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase AC028_RS21240 ade0aadd7c3ddd0cade3979967694e08 503 Pfam PF13440 Polysaccharide biosynthesis protein 49 341 7.4E-79 T 05-07-2017 AC028_RS01745 1aa7ebb9261d061d3d183de7719565fc 388 Pfam PF07007 Protein of unknown function (DUF1311) 29 107 1.1E-6 T 05-07-2017 IPR009739 Protein of unknown function DUF1311 AC028_RS02205 97c4814e921af43777ad2305cdaff48b 145 Pfam PF11162 Protein of unknown function (DUF2946) 14 142 2.7E-6 T 05-07-2017 IPR021333 Protein of unknown function DUF2946 AC028_RS19115 aaae743ef64327df7644c1e56e3c183a 88 Pfam PF07896 Protein of unknown function (DUF1674) 51 88 1.8E-16 T 05-07-2017 IPR012875 Protein of unknown function DUF1674 AC028_RS05690 31f00256b8db745815b7fce48815985f 99 TIGRFAM TIGR04509 mod_pep_NH_fam: putative modified peptide 3 91 5.4E-32 T 05-07-2017 IPR030976 Putative modified peptide AC028_RS11905 6379ee688a745da0e56f0bb1f22e40dd 238 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 1 238 5.0E-75 T 05-07-2017 IPR010239 Conserved hypothetical protein CHP02001 AC028_RS11905 6379ee688a745da0e56f0bb1f22e40dd 238 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 26 225 2.0E-25 T 05-07-2017 IPR010239 Conserved hypothetical protein CHP02001 AC028_RS07580 df70ac7211ae1f99fb2bd7d7bda5a2a4 105 Pfam PF04341 Protein of unknown function, DUF485 14 101 2.4E-33 T 05-07-2017 IPR007436 Protein of unknown function DUF485 AC028_RS08220 7c75f81d4c1939a36d2619d4953d0fa5 114 Pfam PF04505 Interferon-induced transmembrane protein 20 90 3.5E-20 T 05-07-2017 IPR007593 CD225/Dispanin family GO:0009607|GO:0016021 AC028_RS05550 7f35fdbc89a106781b595b422af45f5b 336 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 4 251 4.5E-48 T 05-07-2017 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 AC028_RS05550 7f35fdbc89a106781b595b422af45f5b 336 Gene3D G3DSA:3.40.50.720 1 323 4.3E-62 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS05550 7f35fdbc89a106781b595b422af45f5b 336 SUPERFAMILY SSF51735 1 325 1.79E-66 T 05-07-2017 IPR016040 NAD(P)-binding domain AC028_RS12960 436bb2c29b80b71a7ffbc1b8255fb311 256 Gene3D G3DSA:3.90.226.10 3 230 1.5E-45 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS12960 436bb2c29b80b71a7ffbc1b8255fb311 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 224 2.0E-40 T 05-07-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AC028_RS12960 436bb2c29b80b71a7ffbc1b8255fb311 256 SUPERFAMILY SSF52096 8 243 8.4E-48 T 05-07-2017 IPR029045 ClpP/crotonase-like domain AC028_RS19420 9bb67c423769604762a6965b7d302929 158 Gene3D G3DSA:3.40.109.10 9 155 6.2E-33 T 05-07-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AC028_RS19420 9bb67c423769604762a6965b7d302929 158 Pfam PF00881 Nitroreductase family 9 134 1.1E-10 T 05-07-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 AC028_RS19420 9bb67c423769604762a6965b7d302929 158 SUPERFAMILY SSF55469 2 156 2.36E-35 T 05-07-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AC028_RS09280 d1daf02b9968cb6dcc4a19fe832439eb 148 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 36 135 1.1E-13 T 05-07-2017 IPR019223 Domain of unknown function DUF2147 AC028_RS09430 9ead06f2f7c758a1a89595cf319cf580 312 Gene3D G3DSA:2.60.200.20 2 39 9.0E-4 T 05-07-2017 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AC028_RS04590 0dffcb8c67ea861c5fbe71966fcd437f 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 3.1E-21 T 05-07-2017 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 AC028_RS14760 6ca38e17875211fc6649e0d02f12004b 254 Pfam PF11101 Protein of unknown function (DUF2884) 33 246 8.6E-39 T 05-07-2017 IPR021307 Protein of unknown function DUF2884 AC028_RS01470 60ac82492a14dabcd1408ffb462de1dc 254 Pfam PF11218 Protein of unknown function (DUF3011) 37 251 8.3E-73 T 05-07-2017 IPR021381 Protein of unknown function DUF3011 AC028_RS19400 9c9388f9bd5ed03d2a8938feb034feb4 280 Pfam PF09836 Putative DNA-binding domain 13 104 2.3E-20 T 05-07-2017 IPR018640 Putative DNA-binding domain, bacteria AC028_RS07620 1be2b4be1ffad0c21c6bbad4d2fdd025 145 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 46 126 1.1E-8 T 05-07-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AC028_RS07620 1be2b4be1ffad0c21c6bbad4d2fdd025 145 Gene3D G3DSA:3.90.1590.10 25 130 2.5E-17 T 05-07-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AC028_RS07620 1be2b4be1ffad0c21c6bbad4d2fdd025 145 SUPERFAMILY SSF51316 19 139 1.05E-29 T 05-07-2017 IPR011057 Mss4-like AC028_RS10450 0bbedb7df7a73c0baeb32e254134c148 175 Pfam PF11776 Nickel/cobalt transporter regulator 124 170 1.8E-16 T 05-07-2017 IPR024572 Nickel/cobalt homeostasis protein RcnB AC028_RS10450 0bbedb7df7a73c0baeb32e254134c148 175 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 124 172 3.0E-21 T 05-07-2017 IPR024572 Nickel/cobalt homeostasis protein RcnB AC028_RS05755 254730bb03d3a432638be69a06036b0f 103 Pfam PF12365 Protein of unknown function (DUF3649) 71 98 3.8E-7 T 05-07-2017 IPR022109 Protein of unknown function DUF3649 AC028_RS14030 a12acc9b1715ac11511065511fcfa4cb 425 Pfam PF04932 O-Antigen ligase 189 344 9.1E-16 T 05-07-2017 IPR007016 O-antigen ligase-related AC028_RS04515 c210acad06be06098e5e3d8c3795cb6f 620 Pfam PF05960 Bacterial protein of unknown function (DUF885) 79 608 1.9E-85 T 05-07-2017 IPR010281 Protein of unknown function DUF885 AC028_RS15295 aae626d9b02652e1461a40901dc2664d 149 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 29 148 1.8E-33 T 05-07-2017 IPR019223 Domain of unknown function DUF2147 AC028_RS17095 8ec3da43b72e60b619e13981242cd3c1 169 Pfam PF01292 Prokaryotic cytochrome b561 1 166 5.5E-21 T 05-07-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AC028_RS17095 8ec3da43b72e60b619e13981242cd3c1 169 SUPERFAMILY SSF81342 2 167 5.16E-28 T 05-07-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AC028_RS14185 0435137d41062b7985833d01ffb88e2e 169 Pfam PF04985 Phage tail tube protein FII 4 168 4.0E-69 T 05-07-2017 IPR006498 Tail tube protein AC028_RS14185 0435137d41062b7985833d01ffb88e2e 169 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 168 8.0E-62 T 05-07-2017 IPR006498 Tail tube protein AC028_RS17065 c5d188e4151e12942c9ea8e5893cf1bd 253 Pfam PF13490 Putative zinc-finger 47 80 3.2E-5 T 05-07-2017 IPR027383 Putative zinc-finger AC028_RS02275 0a5a0b652902da71d92333d890ccdf8a 431 Pfam PF13163 Protein of unknown function (DUF3999) 79 421 2.5E-84 T 05-07-2017 IPR025060 Protein of unknown function DUF3999 AC028_RS02275 0a5a0b652902da71d92333d890ccdf8a 431 Pfam PF13163 Protein of unknown function (DUF3999) 23 81 6.7E-13 T 05-07-2017 IPR025060 Protein of unknown function DUF3999 AC028_RS17125 44518abffae46ef9880282dc48422d19 417 Pfam PF13440 Polysaccharide biosynthesis protein 38 331 4.1E-12 T 05-07-2017 AC028_RS21435 09adfb1926a620c96a0d3661f17680b0 175 Pfam PF14341 PilX N-terminal 21 69 3.4E-12 T 05-07-2017 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain AC028_RS02945 6f6951c630d9f23f3485cb54c30bdb96 65 Pfam PF10276 Zinc-finger domain 25 61 3.4E-8 T 05-07-2017 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS02945 6f6951c630d9f23f3485cb54c30bdb96 65 Gene3D G3DSA:2.60.260.40 12 63 9.9E-19 T 05-07-2017 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS08185 31d39464f65702c9b1cba48433499c80 149 Pfam PF04519 Polymer-forming cytoskeletal 16 116 6.3E-26 T 05-07-2017 IPR007607 Protein of unknown function DUF583 AC028_RS18240 09c23e97e163a5c43dc7b8657d15feb1 246 Pfam PF01618 MotA/TolQ/ExbB proton channel family 103 219 2.0E-24 T 05-07-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AC028_RS03405 d0bb49bea92e5ab49c9eaca58fd75095 364 SUPERFAMILY SSF110849 43 113 1.03E-5 T 05-07-2017 IPR003115 ParB/Sulfiredoxin AC028_RS03405 d0bb49bea92e5ab49c9eaca58fd75095 364 Gene3D G3DSA:3.90.1530.10 42 95 1.8E-5 T 05-07-2017 AC028_RS03365 9a2a6112144df0acb74b1803e987e827 122 Pfam PF13511 Domain of unknown function (DUF4124) 2 53 5.7E-15 T 05-07-2017 IPR025392 Domain of unknown function DUF4124 AC028_RS11010 60c5a22f0e8ce049494125c9dd2feae5 283 SUPERFAMILY SSF161098 71 251 3.4E-33 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS11010 60c5a22f0e8ce049494125c9dd2feae5 283 Gene3D G3DSA:1.10.3720.10 70 263 4.2E-22 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS11010 60c5a22f0e8ce049494125c9dd2feae5 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 263 1.3E-28 T 05-07-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AC028_RS05750 b34e2e1b56603f990827d0977493fae1 538 Pfam PF03929 PepSY-associated TM region 10 369 4.9E-51 T 05-07-2017 IPR005625 PepSY-associated TM protein AC028_RS00425 f5585733658beca035b3305c858c9ff3 388 Pfam PF01594 Domain of unknown function DUF20 18 348 6.6E-59 T 05-07-2017 IPR002549 Transmembrane protein TqsA-like AC028_RS20600 3abb49b99942e66434b9b66b3331944e 427 Pfam PF13387 Domain of unknown function (DUF4105) 60 194 9.1E-17 T 05-07-2017 IPR025178 Domain of unknown function DUF4105 AC028_RS05135 08c903d978fc5ada8c062afa1a69121d 137 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 2 129 6.5E-23 T 05-07-2017 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AC028_RS16065 7bb1004d73316bb568c309979ef9f222 356 Pfam PF00248 Aldo/keto reductase family 22 325 1.1E-70 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS16065 7bb1004d73316bb568c309979ef9f222 356 SUPERFAMILY SSF51430 10 325 1.57E-91 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS16065 7bb1004d73316bb568c309979ef9f222 356 Gene3D G3DSA:3.20.20.100 16 330 7.9E-93 T 05-07-2017 IPR023210 NADP-dependent oxidoreductase domain AC028_RS15080 af8dcdd6f052ed996b25fe098fcbbbba 98 Pfam PF04325 Protein of unknown function (DUF465) 46 92 5.3E-12 T 05-07-2017 IPR007420 Protein of unknown function DUF465 AC028_RS08285 10b18f38d80232a47bf9d58e4fc99308 505 TIGRFAM TIGR04222 near_uncomplex: TIGR04222 domain 225 445 9.7E-43 T 05-07-2017 IPR026467 Ser/Gly rich, Cys interspersed, C-terminal domain AC028_RS07065 88eb381ffa60fa1bb83362393ea04f82 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 135 2.4E-24 T 05-07-2017 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AC028_RS13650 6db10f88d28a92bb0213ce94d2220910 333 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 11 320 8.8E-97 T 05-07-2017 IPR016833 Putative sodium bile acid cotransporter AC028_RS13650 6db10f88d28a92bb0213ce94d2220910 333 PIRSF PIRSF026166 1 333 2.6E-133 T 05-07-2017 IPR016833 Putative sodium bile acid cotransporter AC028_RS00755 92e7b9b8dfb3358dd01867f94542991a 223 Pfam PF10679 Protein of unknown function (DUF2491) 3 220 9.4E-64 T 05-07-2017 IPR019621 Protein of unknown function DUF2491 AC028_RS03675 cbb33806a30c854576cec97cd07e5673 260 Pfam PF06966 Protein of unknown function (DUF1295) 21 250 2.0E-78 T 05-07-2017 IPR010721 Protein of unknown function DUF1295 AC028_RS19565 bfd9c934e1ddc428bb1904380b131be6 76 TIGRFAM TIGR03510 XapX: XapX domain 5 51 1.5E-14 T 05-07-2017 IPR020017 XapX domain AC028_RS15000 b5ec6937728996f8516d7936b7345da3 111 Pfam PF09361 Phasin protein 8 95 8.1E-7 T 05-07-2017 IPR018968 Phasin AC028_RS04195 60c70e9ed2d7abfc45284ec9c379056c 368 Pfam PF01594 Domain of unknown function DUF20 33 354 2.1E-43 T 05-07-2017 IPR002549 Transmembrane protein TqsA-like AC028_RS22310 1a32dd8cb387f46682b5b8f05d58123f 228 Pfam PF11740 Plasmid replication region DNA-binding N-term 8 118 3.3E-14 T 05-07-2017 IPR021104 KfrA, N-terminal DNA-binding domain AC028_RS14245 81fad0d93c194cac7ead17ffc3ff3d48 389 SUPERFAMILY SSF56935 20 389 2.88E-20 T 05-07-2017 AC028_RS14180 04cbd644441e99f42e14104405d60ac0 100 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 9 87 7.2E-16 T 05-07-2017 IPR019289 Bacteriophage tail protein Gp41, putative AC028_RS20400 21300d048f428d7b9a96cefc56382fde 299 Pfam PF07920 Protein of unknown function (DUF1684) 157 293 6.5E-43 T 05-07-2017 IPR012467 Protein of unknown function DUF1684 AC028_RS08000 3838ba30882a5838df7316a72e3b998b 94 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 36 87 3.5E-19 T 05-07-2017 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 AC028_RS08000 3838ba30882a5838df7316a72e3b998b 94 PIRSF PIRSF028784 4 94 1.3E-26 T 05-07-2017 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 AC028_RS16695 c4b18461d05a665c740326bf07ba6685 176 Pfam PF11655 Protein of unknown function (DUF2589) 6 165 3.2E-25 T 05-07-2017 IPR024510 Protein of unknown function DUF2589 AC028_RS11455 f38e111ba60fe1dbbf389fa86cfbc743 114 Pfam PF09842 Predicted membrane protein (DUF2069) 12 94 2.6E-8 T 05-07-2017 IPR018643 Protein of unknown function DUF2069, membrane AC028_RS19630 a6f878ffef31603096ff0ad396e027df 277 Pfam PF13280 WYL domain 115 200 4.5E-13 T 05-07-2017 IPR026881 WYL domain AC028_RS04865 6ec7154ec41d1cd25cbe76875bd757a8 96 Pfam PF11191 Protein of unknown function (DUF2782) 33 96 1.8E-15 T 05-07-2017 IPR021357 Protein of unknown function DUF2782 AC028_RS13045 876631f007faa72b2f36a9da6362b771 143 Pfam PF13356 Domain of unknown function (DUF4102) 44 117 4.7E-9 T 05-07-2017 IPR025166 Domain of unknown function DUF4102 AC028_RS11355 4cfa580af8b793eb1ff0130c7f4f2309 785 Pfam PF07793 Protein of unknown function (DUF1631) 11 775 3.5E-207 T 05-07-2017 IPR012434 Protein of unknown function DUF1631 AC028_RS19990 09a725912927b8e23ad327c9ac2af611 307 Pfam PF01609 Transposase DDE domain 158 294 1.7E-8 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS13620 aef4b31f541b08d56a5a6749248303a3 72 Pfam PF11137 Protein of unknown function (DUF2909) 8 65 1.5E-22 T 05-07-2017 IPR021313 Protein of unknown function DUF2909 AC028_RS16645 6e9a145ab06e3241e7bd157eee0c72c1 318 Pfam PF06189 5'-nucleotidase 39 316 3.1E-107 T 05-07-2017 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|Reactome: R-HSA-74259 AC028_RS15490 ff9e9a5df457c1fec8081b6f2a62bbf3 783 Pfam PF00577 Outer membrane usher protein 473 692 8.6E-16 T 05-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AC028_RS15490 ff9e9a5df457c1fec8081b6f2a62bbf3 783 Pfam PF00577 Outer membrane usher protein 197 363 3.5E-11 T 05-07-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AC028_RS15490 ff9e9a5df457c1fec8081b6f2a62bbf3 783 Pfam PF13953 PapC C-terminal domain 702 762 1.2E-11 T 05-07-2017 IPR025949 PapC-like, C-terminal domain AC028_RS04680 6096c71870ee518a0a12f1430751d454 65 ProSitePatterns PS00579 Ribosomal protein L29 signature. 22 36 - T 05-07-2017 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AC028_RS20515 99bb3e30d9eff233477fb8e4ab71d139 114 Pfam PF11743 Protein of unknown function (DUF3301) 5 97 6.6E-29 T 05-07-2017 IPR021732 Protein of unknown function DUF3301 AC028_RS10105 a4164f9498f46796792422197d1d8315 270 Pfam PF10001 Uncharacterized protein conserved in bacteria (DUF2242) 66 185 1.7E-48 T 05-07-2017 IPR018718 Protein of unknown function DUF2242 AC028_RS17205 9a6a1dbce86f753b8775d10ba3a15f4c 205 PIRSF PIRSF033239 1 198 6.3E-43 T 05-07-2017 IPR010331 Exopolysaccharide synthesis, ExoD AC028_RS17205 9a6a1dbce86f753b8775d10ba3a15f4c 205 Pfam PF06055 Exopolysaccharide synthesis, ExoD 10 186 6.3E-47 T 05-07-2017 IPR010331 Exopolysaccharide synthesis, ExoD AC028_RS10970 85037951358902a0fee63570bfcf1ef0 163 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 22 137 1.8E-13 T 05-07-2017 IPR007621 TPM domain AC028_RS04900 5faa9c3c5b2842d33437cd66efa88968 191 Gene3D G3DSA:3.40.1730.10 9 156 1.9E-37 T 05-07-2017 AC028_RS04900 5faa9c3c5b2842d33437cd66efa88968 191 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 10 138 2.0E-38 T 05-07-2017 IPR017748 Type VI secretion system-associated, BMAA0400 AC028_RS04900 5faa9c3c5b2842d33437cd66efa88968 191 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 10 138 3.8E-32 T 05-07-2017 IPR017748 Type VI secretion system-associated, BMAA0400 AC028_RS04315 33dae7e4d0ba50fd2d2b68c4b04c7ed9 50 Pfam PF08085 Entericidin EcnA/B family 22 42 3.6E-8 T 05-07-2017 IPR012556 Entericidin A/B GO:0009636|GO:0016020 AC028_RS21255 1cf6ed9b9815bf280261f963982a8edf 352 Pfam PF01757 Acyltransferase family 20 333 1.1E-26 T 05-07-2017 IPR002656 Acyltransferase 3 GO:0016747 AC028_RS14285 68e3482017a8e4d1b08e946fc6348fe8 221 Pfam PF11445 Protein of unknown function (DUF2894) 12 193 1.2E-60 T 05-07-2017 IPR021549 Protein of unknown function DUF2894 AC028_RS09825 4392a0cf6946efbaba704d41e75a82ce 266 Pfam PF04338 Protein of unknown function, DUF481 47 265 8.0E-64 T 05-07-2017 IPR007433 Protein of unknown function DUF481 AC028_RS07215 d987d8a8e7fea54062e1ef66492d2b0c 315 Pfam PF06258 Mitochondrial fission ELM1 12 313 6.9E-78 T 05-07-2017 IPR009367 Mitochondrial fission protein ELM1-like AC028_RS07575 bda9dad93deff66f0d8aba375babbbca 452 SUPERFAMILY SSF56935 148 452 7.33E-21 T 05-07-2017 AC028_RS07575 bda9dad93deff66f0d8aba375babbbca 452 SUPERFAMILY SSF56935 91 119 7.33E-21 T 05-07-2017 AC028_RS15325 f8a9f2aee9c46b8cf376f9d632f2333a 645 Pfam PF05960 Bacterial protein of unknown function (DUF885) 101 636 3.1E-166 T 05-07-2017 IPR010281 Protein of unknown function DUF885 AC028_RS02600 acbab4e52531e7e6d56badf839423ffd 115 Pfam PF07238 PilZ domain 6 109 1.6E-7 T 05-07-2017 IPR009875 PilZ domain GO:0035438 AC028_RS01110 f8c535cc658d47436d059130bf40ef9c 109 Pfam PF11747 Killing trait 11 77 2.5E-26 T 05-07-2017 IPR021070 Killing trait, RebB AC028_RS08595 a5ce246d72ae5a4a4266cbc3dd86adae 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 91 2.5E-19 T 05-07-2017 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AC028_RS10750 eef14ca514c879bbad0a8c0757b5f3ad 185 Pfam PF11539 Protein of unknown function (DUF3228) 3 183 9.3E-61 T 05-07-2017 IPR021610 Protein of unknown function DUF3228 AC028_RS10395 ccd4aa732b6049fef25176654320a5c5 91 Pfam PF02583 Metal-sensitive transcriptional repressor 7 83 1.2E-19 T 05-07-2017 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 AC028_RS14425 1c439ea18d917c43b508efc3360fff4c 190 SUPERFAMILY SSF143081 69 167 1.83E-5 T 05-07-2017 IPR003738 SOS response associated peptidase (SRAP) AC028_RS03175 22ce3517b61b167413acc7e576e92966 217 Pfam PF10741 Type II secretion system (T2SS), protein M subtype b 76 190 3.4E-31 T 05-07-2017 IPR007690 Type II secretion system, protein M GO:0006858 AC028_RS03670 31c4d6feb1ffee4fcf17fd23f51ecd7f 181 Pfam PF11086 Protein of unknown function (DUF2878) 4 158 1.6E-39 T 05-07-2017 IPR021306 Protein of unknown function DUF2878 AC028_RS21355 8b3b082730f363d5095b1feaa9c1eb0e 256 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 13 175 3.3E-29 T 05-07-2017 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 AC028_RS00040 030fdc8e23271000f5313d996c148532 237 Hamap MF_00801 Endonuclease V [nfi]. 14 227 35.138 T 05-07-2017 IPR007581 Endonuclease V GO:0004519|GO:0006281 AC028_RS00040 030fdc8e23271000f5313d996c148532 237 Pfam PF04493 Endonuclease V 24 218 4.7E-69 T 05-07-2017 IPR007581 Endonuclease V GO:0004519|GO:0006281 AC028_RS14050 5a30a76022d65502cd24ff4def399fee 158 Pfam PF03703 Bacterial PH domain 71 147 8.3E-15 T 05-07-2017 IPR005182 Domain of unknown function DUF304 AC028_RS00250 69d5c7016837a51e769065ad5fe51d0a 218 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 34 206 7.2E-31 T 05-07-2017 IPR003740 Uncharacterised membrane protein YitT AC028_RS21580 c32864576d3709ae3eff0e54ce64b399 219 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 20 167 5.2E-36 T 05-07-2017 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AC028_RS15345 cee816642a2137448bce97375ba5e61b 507 Pfam PF13372 Alginate export 110 498 3.3E-41 T 05-07-2017 IPR025388 Alginate export domain AC028_RS22445 b95906e6912c517fcb1e5ec19bdd8581 99 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 12 92 2.3E-17 T 05-07-2017 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB AC028_RS14985 83b4f7740388a7aa7489a6718f183127 128 Gene3D G3DSA:1.10.150.20 5 82 4.4E-25 T 05-07-2017 AC028_RS14985 83b4f7740388a7aa7489a6718f183127 128 Pfam PF04994 TfoX C-terminal domain 5 78 1.6E-26 T 05-07-2017 IPR007077 TfoX, C-terminal AC028_RS06520 6e5d8223f536c87549cc2684997e47d9 371 Pfam PF14315 Domain of unknown function (DUF4380) 38 332 1.9E-130 T 05-07-2017 IPR025488 Protein of unknown function DUF4380 AC028_RS22370 e3704c14b683ef5a9fe7dcd6420903fd 72 Pfam PF11455 Protein of unknown function (DUF3018) 5 70 1.3E-33 T 05-07-2017 IPR021558 Protein of unknown function DUF3018 AC028_RS02100 0326e742b69cd49f4b428b05c42637d3 219 Pfam PF07791 Protein of unknown function (DUF1629) 18 139 3.5E-51 T 05-07-2017 IPR012433 Protein of unknown function DUF1629 AC028_RS04065 75617da6fe65c3a135a7333fe6031968 373 Pfam PF00487 Fatty acid desaturase 71 337 1.7E-32 T 05-07-2017 IPR005804 Fatty acid desaturase domain GO:0006629 AC028_RS00770 4787fd2e5cbc79946bbc713ade9cdc7a 138 Pfam PF09938 Uncharacterized protein conserved in bacteria (DUF2170) 4 136 6.9E-41 T 05-07-2017 IPR019231 Protein of unknown function DUF2170 AC028_RS09875 02aa7c618eb9c799ae3ced8db881f00f 84 Pfam PF13627 Prokaryotic lipoprotein-attachment site 11 33 1.6E-6 T 05-07-2017 IPR032831 Prokaryotic lipoprotein-attachment site AC028_RS16055 d025041c8a946363e068c745fce254e5 122 Pfam PF11512 Agrobacterium tumefaciens protein Atu4866 44 118 1.9E-39 T 05-07-2017 IPR020955 Uncharacterised protein family Atu4866 AC028_RS18480 b2734e6f594cb2d0b8fc139e268ba459 211 Pfam PF04230 Polysaccharide pyruvyl transferase 38 188 3.6E-10 T 05-07-2017 IPR007345 Polysaccharide pyruvyl transferase AC028_RS03560 ea1553aeecd308e58dcbc1a1a3491de3 130 Pfam PF04956 TrbC/VIRB2 family 33 120 1.2E-24 T 05-07-2017 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AC028_RS13405 8d5991b2e601daa2d8f902242d6f1dbc 67 Pfam PF01609 Transposase DDE domain 8 51 1.3E-8 T 05-07-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AC028_RS20775 25274f719d9008a5c50e2cf397f8c09f 1318 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 8 101 1.1E-5 T 05-07-2017 IPR032871 AHH domain-containing protein AC028_RS05275 07328db5bc97176422ebbb1cc0b3c114 305 Pfam PF03547 Membrane transport protein 7 138 3.3E-10 T 05-07-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AC028_RS05275 07328db5bc97176422ebbb1cc0b3c114 305 Pfam PF03547 Membrane transport protein 160 296 3.7E-14 T 05-07-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AC028_RS04560 16b18a15db66e8b004fc69d47117ed42 403 Pfam PF12679 ABC-2 family transporter protein 11 394 2.0E-22 T 05-07-2017 IPR032688 ABC-2 family transporter protein GO:0006810 AC028_RS02765 ce376b7748a7eb879179c0f22e0503fc 294 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 12 267 6.9E-40 T 05-07-2017 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351