locus-tag class description DYQ48_RS00005 PF02768 DNA polymerase III beta subunit, C-terminal domain DYQ48_RS00005 PF02767 DNA polymerase III beta subunit, central domain DYQ48_RS00005 PF00712 DNA polymerase III beta subunit, N-terminal domain DYQ48_RS00010 PF02463 RecF/RecN/SMC N terminal domain DYQ48_RS00015 PF01751 Toprim domain DYQ48_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS00015 PF18053 DNA gyrase B subunit insert domain DYQ48_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus DYQ48_RS00015 PF00204 DNA gyrase B DYQ48_RS00025 PF01435 Peptidase family M48 DYQ48_RS00035 PF03544 Gram-negative bacterial TonB protein C-terminal DYQ48_RS00040 PF01618 MotA/TolQ/ExbB proton channel family DYQ48_RS00045 PF02472 Biopolymer transport protein ExbD/TolR DYQ48_RS00050 PF02472 Biopolymer transport protein ExbD/TolR DYQ48_RS00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DYQ48_RS00070 PF13091 PLD-like domain DYQ48_RS00070 PF13396 Phospholipase_D-nuclease N-terminal DYQ48_RS00075 PF04055 Radical SAM superfamily DYQ48_RS00085 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DYQ48_RS00100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYQ48_RS00100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYQ48_RS00105 PF03572 Peptidase family S41 DYQ48_RS00105 PF13180 PDZ domain DYQ48_RS00110 PF01551 Peptidase family M23 DYQ48_RS00120 PF04389 Peptidase family M28 DYQ48_RS00130 PF00150 Cellulase (glycosyl hydrolase family 5) DYQ48_RS00135 PF00150 Cellulase (glycosyl hydrolase family 5) DYQ48_RS00140 PF00150 Cellulase (glycosyl hydrolase family 5) DYQ48_RS00145 PF00150 Cellulase (glycosyl hydrolase family 5) DYQ48_RS00150 PF08240 Alcohol dehydrogenase GroES-like domain DYQ48_RS00150 PF00107 Zinc-binding dehydrogenase DYQ48_RS00160 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYQ48_RS00160 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DYQ48_RS00165 PF00310 Glutamine amidotransferases class-II DYQ48_RS00165 PF04898 Glutamate synthase central domain DYQ48_RS00165 PF01645 Conserved region in glutamate synthase DYQ48_RS00165 PF01493 GXGXG motif DYQ48_RS00205 PF02525 Flavodoxin-like fold DYQ48_RS00210 PF03466 LysR substrate binding domain DYQ48_RS00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS00220 PF06165 Glycosyltransferase family 36 DYQ48_RS00220 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain DYQ48_RS00220 PF10091 Putative glucoamylase DYQ48_RS00230 PF01804 Penicillin amidase DYQ48_RS00255 PF01638 HxlR-like helix-turn-helix DYQ48_RS00330 PF00271 Helicase conserved C-terminal domain DYQ48_RS00330 PF09369 Domain of unknown function (DUF1998) DYQ48_RS00330 PF00270 DEAD/DEAH box helicase DYQ48_RS00340 PF03006 Haemolysin-III related DYQ48_RS00385 PF03466 LysR substrate binding domain DYQ48_RS00385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS00405 PF02525 Flavodoxin-like fold DYQ48_RS00410 PF09722 Protein of unknown function (DUF2384) DYQ48_RS00410 PF01936 NYN domain DYQ48_RS00420 PF01638 HxlR-like helix-turn-helix DYQ48_RS00455 PF05532 CsbD-like DYQ48_RS00460 PF00072 Response regulator receiver domain DYQ48_RS00460 PF00196 Bacterial regulatory proteins, luxR family DYQ48_RS00485 PF01447 Thermolysin metallopeptidase, catalytic domain DYQ48_RS00485 PF02868 Thermolysin metallopeptidase, alpha-helical domain DYQ48_RS00485 PF16485 Protealysin propeptide DYQ48_RS00495 PF00293 NUDIX domain DYQ48_RS00495 PF09297 NADH pyrophosphatase zinc ribbon domain DYQ48_RS00500 PF07859 alpha/beta hydrolase fold DYQ48_RS00510 PF00085 Thioredoxin DYQ48_RS00515 PF00083 Sugar (and other) transporter DYQ48_RS00515 PF08946 Osmosensory transporter coiled coil DYQ48_RS00555 PF07726 ATPase family associated with various cellular activities (AAA) DYQ48_RS00555 PF17863 AAA lid domain DYQ48_RS00600 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DYQ48_RS00605 PF00155 Aminotransferase class I and II DYQ48_RS00610 PF00593 TonB dependent receptor DYQ48_RS00610 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS00620 PF07883 Cupin domain DYQ48_RS00630 PF00171 Aldehyde dehydrogenase family DYQ48_RS00635 PF00107 Zinc-binding dehydrogenase DYQ48_RS00635 PF08240 Alcohol dehydrogenase GroES-like domain DYQ48_RS00650 PF02735 Ku70/Ku80 beta-barrel domain DYQ48_RS00655 PF01068 ATP dependent DNA ligase domain DYQ48_RS00655 PF04679 ATP dependent DNA ligase C terminal region DYQ48_RS00655 PF13298 DNA polymerase Ligase (LigD) DYQ48_RS00670 PF01070 FMN-dependent dehydrogenase DYQ48_RS00685 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DYQ48_RS00690 PF07730 Histidine kinase DYQ48_RS00695 PF00072 Response regulator receiver domain DYQ48_RS00695 PF00196 Bacterial regulatory proteins, luxR family DYQ48_RS00710 PF00486 Transcriptional regulatory protein, C terminal DYQ48_RS00710 PF18500 CadC C-terminal domain 1 DYQ48_RS00715 PF12241 Trans-2-enoyl-CoA reductase catalytic region DYQ48_RS00715 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DYQ48_RS00715 PF07055 Enoyl reductase FAD binding domain DYQ48_RS00725 PF00294 pfkB family carbohydrate kinase DYQ48_RS00730 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS00730 PF00593 TonB dependent receptor DYQ48_RS00740 PF01095 Pectinesterase DYQ48_RS00770 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DYQ48_RS00840 PF05598 Transposase domain (DUF772) DYQ48_RS00840 PF01609 Transposase DDE domain DYQ48_RS00880 PF00795 Carbon-nitrogen hydrolase DYQ48_RS00905 PF11896 Domain of unknown function (DUF3416) DYQ48_RS00905 PF00128 Alpha amylase, catalytic domain DYQ48_RS00910 PF00128 Alpha amylase, catalytic domain DYQ48_RS00910 PF16657 Maltogenic Amylase, C-terminal domain DYQ48_RS00915 PF02806 Alpha amylase, C-terminal all-beta domain DYQ48_RS00915 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DYQ48_RS00915 PF00128 Alpha amylase, catalytic domain DYQ48_RS00940 PF00248 Aldo/keto reductase family DYQ48_RS00945 PF13472 GDSL-like Lipase/Acylhydrolase family DYQ48_RS00950 PF00135 Carboxylesterase family DYQ48_RS00955 PF13472 GDSL-like Lipase/Acylhydrolase family DYQ48_RS00955 PF07859 alpha/beta hydrolase fold DYQ48_RS00965 PF03480 Bacterial extracellular solute-binding protein, family 7 DYQ48_RS00975 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DYQ48_RS00980 PF04616 Glycosyl hydrolases family 43 DYQ48_RS00980 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DYQ48_RS00985 PF00356 Bacterial regulatory proteins, lacI family DYQ48_RS00995 PF04962 KduI/IolB family DYQ48_RS01010 PF00657 GDSL-like Lipase/Acylhydrolase DYQ48_RS01030 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DYQ48_RS01035 PF01037 Lrp/AsnC ligand binding domain DYQ48_RS01040 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS01040 PF07660 Secretin and TonB N terminus short domain DYQ48_RS01040 PF00593 TonB dependent receptor DYQ48_RS01045 PF01734 Patatin-like phospholipase DYQ48_RS01050 PF00005 ABC transporter DYQ48_RS01065 PF00005 ABC transporter DYQ48_RS01065 PF00571 CBS domain DYQ48_RS01070 PF00528 Binding-protein-dependent transport system inner membrane component DYQ48_RS01080 PF03781 Sulfatase-modifying factor enzyme 1 DYQ48_RS01080 PF12867 DinB superfamily DYQ48_RS01090 PF07804 HipA-like C-terminal domain DYQ48_RS01090 PF13657 HipA N-terminal domain DYQ48_RS01095 PF01381 Helix-turn-helix DYQ48_RS01125 PF10609 NUBPL iron-transfer P-loop NTPase DYQ48_RS01125 PF01883 Iron-sulfur cluster assembly protein DYQ48_RS01140 PF13091 PLD-like domain DYQ48_RS01150 PF03061 Thioesterase superfamily DYQ48_RS01175 PF01161 Phosphatidylethanolamine-binding protein DYQ48_RS01185 PF02673 Bacitracin resistance protein BacA DYQ48_RS01190 PF00120 Glutamine synthetase, catalytic domain DYQ48_RS01190 PF03951 Glutamine synthetase, beta-Grasp domain DYQ48_RS01195 PF00543 Nitrogen regulatory protein P-II DYQ48_RS01200 PF00909 Ammonium Transporter Family DYQ48_RS01205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS01205 PF00989 PAS fold DYQ48_RS01205 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS01210 PF00158 Sigma-54 interaction domain DYQ48_RS01210 PF02954 Bacterial regulatory protein, Fis family DYQ48_RS01210 PF00072 Response regulator receiver domain DYQ48_RS01215 PF00080 Copper/zinc superoxide dismutase (SODC) DYQ48_RS01220 PF00080 Copper/zinc superoxide dismutase (SODC) DYQ48_RS01230 PF02803 Thiolase, C-terminal domain DYQ48_RS01230 PF00108 Thiolase, N-terminal domain DYQ48_RS01275 PF00581 Rhodanese-like domain DYQ48_RS01280 PF02556 Preprotein translocase subunit SecB DYQ48_RS01285 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DYQ48_RS01285 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DYQ48_RS01295 PF00205 Thiamine pyrophosphate enzyme, central domain DYQ48_RS01295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYQ48_RS01295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYQ48_RS01300 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS01300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS01305 PF02954 Bacterial regulatory protein, Fis family DYQ48_RS01305 PF00072 Response regulator receiver domain DYQ48_RS01305 PF00158 Sigma-54 interaction domain DYQ48_RS01325 PF07690 Major Facilitator Superfamily DYQ48_RS01330 PF00588 SpoU rRNA Methylase family DYQ48_RS01345 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DYQ48_RS01345 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DYQ48_RS01350 PF02661 Fic/DOC family DYQ48_RS01350 PF13784 Fic/DOC family N-terminal DYQ48_RS01355 PF00561 alpha/beta hydrolase fold DYQ48_RS01360 PF03692 Putative zinc- or iron-chelating domain DYQ48_RS01365 PF00501 AMP-binding enzyme DYQ48_RS01380 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DYQ48_RS01395 PF07478 D-ala D-ala ligase C-terminus DYQ48_RS01395 PF01820 D-ala D-ala ligase N-terminus DYQ48_RS01405 PF03109 ABC1 family DYQ48_RS01410 PF00849 RNA pseudouridylate synthase DYQ48_RS01420 PF00472 RF-1 domain DYQ48_RS01430 PF01112 Asparaginase DYQ48_RS01435 PF01432 Peptidase family M3 DYQ48_RS01445 PF12706 Beta-lactamase superfamily domain DYQ48_RS01455 PF03466 LysR substrate binding domain DYQ48_RS01455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS01460 PF01274 Malate synthase DYQ48_RS01465 PF00463 Isocitrate lyase family DYQ48_RS01470 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS01490 PF00326 Prolyl oligopeptidase family DYQ48_RS01495 PF02785 Biotin carboxylase C-terminal domain DYQ48_RS01495 PF00289 Biotin carboxylase, N-terminal domain DYQ48_RS01495 PF00364 Biotin-requiring enzyme DYQ48_RS01495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DYQ48_RS01500 PF01039 Carboxyl transferase domain DYQ48_RS01505 PF02770 Acyl-CoA dehydrogenase, middle domain DYQ48_RS01505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYQ48_RS01505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYQ48_RS01545 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DYQ48_RS01560 PF02492 CobW/HypB/UreG, nucleotide-binding domain DYQ48_RS01560 PF07683 Cobalamin synthesis protein cobW C-terminal domain DYQ48_RS01585 PF03969 AFG1-like ATPase DYQ48_RS01600 PF01047 MarR family DYQ48_RS01605 PF02566 OsmC-like protein DYQ48_RS01610 PF12697 Alpha/beta hydrolase family DYQ48_RS01630 PF00248 Aldo/keto reductase family DYQ48_RS01635 PF16884 N-terminal domain of oxidoreductase DYQ48_RS01635 PF00107 Zinc-binding dehydrogenase DYQ48_RS01640 PF00248 Aldo/keto reductase family DYQ48_RS01650 PF00849 RNA pseudouridylate synthase DYQ48_RS01655 PF00593 TonB dependent receptor DYQ48_RS01665 PF08482 ATP-dependent helicase C-terminal DYQ48_RS01665 PF00271 Helicase conserved C-terminal domain DYQ48_RS01665 PF04408 Helicase associated domain (HA2) DYQ48_RS01665 PF00270 DEAD/DEAH box helicase DYQ48_RS01670 PF00672 HAMP domain DYQ48_RS01670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS01670 PF02203 Tar ligand binding domain homologue DYQ48_RS01680 PF07308 Protein of unknown function (DUF1456) DYQ48_RS01685 PF00576 HIUase/Transthyretin family DYQ48_RS01690 PF13454 FAD-NAD(P)-binding DYQ48_RS01695 PF01014 Uricase DYQ48_RS01695 PF09349 OHCU decarboxylase DYQ48_RS01710 PF00266 Aminotransferase class-V DYQ48_RS01715 PF01546 Peptidase family M20/M25/M40 DYQ48_RS01715 PF07687 Peptidase dimerisation domain DYQ48_RS01720 PF03466 LysR substrate binding domain DYQ48_RS01720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS01725 PF07690 Major Facilitator Superfamily DYQ48_RS01730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS01730 PF03466 LysR substrate binding domain DYQ48_RS01735 PF00561 alpha/beta hydrolase fold DYQ48_RS01765 PF00145 C-5 cytosine-specific DNA methylase DYQ48_RS01795 PF01425 Amidase DYQ48_RS01800 PF01156 Inosine-uridine preferring nucleoside hydrolase DYQ48_RS01810 PF00860 Permease family DYQ48_RS01815 PF00111 2Fe-2S iron-sulfur cluster binding domain DYQ48_RS01820 PF00355 Rieske [2Fe-2S] domain DYQ48_RS01825 PF03466 LysR substrate binding domain DYQ48_RS01825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS01830 PF01026 TatD related DNase DYQ48_RS01845 PF03466 LysR substrate binding domain DYQ48_RS01845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS01850 PF07690 Major Facilitator Superfamily DYQ48_RS01875 PF02146 Sir2 family DYQ48_RS01880 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DYQ48_RS01885 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DYQ48_RS01885 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DYQ48_RS01895 PF00551 Formyl transferase DYQ48_RS01900 PF00933 Glycosyl hydrolase family 3 N terminal domain DYQ48_RS01915 PF02219 Methylenetetrahydrofolate reductase DYQ48_RS01920 PF02677 Epoxyqueuosine reductase QueH DYQ48_RS01925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS01925 PF03466 LysR substrate binding domain DYQ48_RS01930 PF03358 NADPH-dependent FMN reductase DYQ48_RS01940 PF08267 Cobalamin-independent synthase, N-terminal domain DYQ48_RS01940 PF01717 Cobalamin-independent synthase, Catalytic domain DYQ48_RS01955 PF05368 NmrA-like family DYQ48_RS01960 PF01638 HxlR-like helix-turn-helix DYQ48_RS02060 PF00589 Phage integrase family DYQ48_RS02060 PF13495 Phage integrase, N-terminal SAM-like domain DYQ48_RS02065 PF00920 Dehydratase family DYQ48_RS02070 PF03692 Putative zinc- or iron-chelating domain DYQ48_RS02075 PF00132 Bacterial transferase hexapeptide (six repeats) DYQ48_RS02080 PF07690 Major Facilitator Superfamily DYQ48_RS02085 PF01966 HD domain DYQ48_RS02085 PF11871 Domain of unknown function (DUF3391) DYQ48_RS02105 PF00171 Aldehyde dehydrogenase family DYQ48_RS02120 PF01494 FAD binding domain DYQ48_RS02135 PF00230 Major intrinsic protein DYQ48_RS02140 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DYQ48_RS02140 PF01266 FAD dependent oxidoreductase DYQ48_RS02145 PF00455 DeoR C terminal sensor domain DYQ48_RS02145 PF08220 DeoR-like helix-turn-helix domain DYQ48_RS02150 PF00111 2Fe-2S iron-sulfur cluster binding domain DYQ48_RS02150 PF00970 Oxidoreductase FAD-binding domain DYQ48_RS02160 PF00355 Rieske [2Fe-2S] domain DYQ48_RS02165 PF01144 Coenzyme A transferase DYQ48_RS02170 PF01144 Coenzyme A transferase DYQ48_RS02175 PF02803 Thiolase, C-terminal domain DYQ48_RS02175 PF00108 Thiolase, N-terminal domain DYQ48_RS02180 PF00775 Dioxygenase DYQ48_RS02180 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal DYQ48_RS02190 PF10397 Adenylosuccinate lyase C-terminus DYQ48_RS02190 PF00206 Lyase DYQ48_RS02195 PF12146 Serine aminopeptidase, S33 DYQ48_RS02200 PF02627 Carboxymuconolactone decarboxylase family DYQ48_RS02215 PF09339 IclR helix-turn-helix domain DYQ48_RS02215 PF01614 Bacterial transcriptional regulator DYQ48_RS02225 PF07859 alpha/beta hydrolase fold DYQ48_RS02230 PF10677 Protein of unknown function (DUF2490) DYQ48_RS02235 PF01134 Glucose inhibited division protein A DYQ48_RS02235 PF13932 GidA associated domain DYQ48_RS02245 PF00291 Pyridoxal-phosphate dependent enzyme DYQ48_RS02270 PF13649 Methyltransferase domain DYQ48_RS02280 PF12697 Alpha/beta hydrolase family DYQ48_RS02285 PF00155 Aminotransferase class I and II DYQ48_RS02290 PF04055 Radical SAM superfamily DYQ48_RS02290 PF06968 Biotin and Thiamin Synthesis associated domain DYQ48_RS02305 PF01040 UbiA prenyltransferase family DYQ48_RS02335 PF01431 Peptidase family M13 DYQ48_RS02335 PF05649 Peptidase family M13 DYQ48_RS02355 PF00924 Mechanosensitive ion channel DYQ48_RS02355 PF12794 Mechanosensitive ion channel inner membrane domain 1 DYQ48_RS02355 PF12795 Mechanosensitive ion channel porin domain DYQ48_RS02365 PF00884 Sulfatase DYQ48_RS02375 PF03109 ABC1 family DYQ48_RS02380 PF05661 Protein of unknown function (DUF808) DYQ48_RS02385 PF02638 Glycosyl hydrolase-like 10 DYQ48_RS02390 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS02395 PF08323 Starch synthase catalytic domain DYQ48_RS02395 PF00534 Glycosyl transferases group 1 DYQ48_RS02400 PF02806 Alpha amylase, C-terminal all-beta domain DYQ48_RS02400 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DYQ48_RS02400 PF00128 Alpha amylase, catalytic domain DYQ48_RS02405 PF00128 Alpha amylase, catalytic domain DYQ48_RS02405 PF11941 Domain of unknown function (DUF3459) DYQ48_RS02405 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DYQ48_RS02410 PF02446 4-alpha-glucanotransferase DYQ48_RS02415 PF00128 Alpha amylase, catalytic domain DYQ48_RS02425 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DYQ48_RS02425 PF00128 Alpha amylase, catalytic domain DYQ48_RS02430 PF13460 NAD(P)H-binding DYQ48_RS02450 PF06903 VirK protein DYQ48_RS02455 PF06903 VirK protein DYQ48_RS02460 PF02321 Outer membrane efflux protein DYQ48_RS02465 PF00440 Bacterial regulatory proteins, tetR family DYQ48_RS02475 PF00873 AcrB/AcrD/AcrF family DYQ48_RS02485 PF00270 DEAD/DEAH box helicase DYQ48_RS02485 PF00271 Helicase conserved C-terminal domain DYQ48_RS02495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DYQ48_RS02495 PF00364 Biotin-requiring enzyme DYQ48_RS02495 PF02817 e3 binding domain DYQ48_RS02505 PF02780 Transketolase, C-terminal domain DYQ48_RS02505 PF02779 Transketolase, pyrimidine binding domain DYQ48_RS02510 PF00676 Dehydrogenase E1 component DYQ48_RS02520 PF03301 Tryptophan 2,3-dioxygenase DYQ48_RS02525 PF00854 POT family DYQ48_RS02535 PF01047 MarR family DYQ48_RS02540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DYQ48_RS02545 PF04480 Protein of unknown function (DUF559) DYQ48_RS02550 PF04209 homogentisate 1,2-dioxygenase DYQ48_RS02565 PF03334 Na+/H+ antiporter subunit DYQ48_RS02570 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DYQ48_RS02580 PF00361 Proton-conducting membrane transporter DYQ48_RS02585 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DYQ48_RS02590 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DYQ48_RS02590 PF00361 Proton-conducting membrane transporter DYQ48_RS02590 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DYQ48_RS02590 PF13244 Domain of unknown function (DUF4040) DYQ48_RS02605 PF07504 Fungalysin/Thermolysin Propeptide Motif DYQ48_RS02605 PF01447 Thermolysin metallopeptidase, catalytic domain DYQ48_RS02605 PF02868 Thermolysin metallopeptidase, alpha-helical domain DYQ48_RS02605 PF01483 Proprotein convertase P-domain DYQ48_RS02635 PF05819 NolX protein DYQ48_RS02650 PF00425 chorismate binding enzyme DYQ48_RS02650 PF04715 Anthranilate synthase component I, N terminal region DYQ48_RS02655 PF00781 Diacylglycerol kinase catalytic domain DYQ48_RS02665 PF00834 Ribulose-phosphate 3 epimerase family DYQ48_RS02675 PF05099 Tellurite resistance protein TerB DYQ48_RS02675 PF00226 DnaJ domain DYQ48_RS02680 PF01259 SAICAR synthetase DYQ48_RS02705 PF00561 alpha/beta hydrolase fold DYQ48_RS02760 PF01313 Bacterial export proteins, family 3 DYQ48_RS02765 PF00813 FliP family DYQ48_RS02780 PF00771 FHIPEP family DYQ48_RS02785 PF01312 FlhB HrpN YscU SpaS Family DYQ48_RS02800 PF01514 Secretory protein of YscJ/FliF family DYQ48_RS02815 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYQ48_RS02815 PF18269 T3SS EscN ATPase C-terminal domain DYQ48_RS02815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYQ48_RS02830 PF00263 Bacterial type II and III secretion system protein DYQ48_RS02830 PF03958 Bacterial type II/III secretion system short domain DYQ48_RS02840 PF01464 Transglycosylase SLT domain DYQ48_RS02855 PF02203 Tar ligand binding domain homologue DYQ48_RS02855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS02855 PF00672 HAMP domain DYQ48_RS02860 PF00117 Glutamine amidotransferase class-I DYQ48_RS02870 PF00591 Glycosyl transferase family, a/b domain DYQ48_RS02870 PF02885 Glycosyl transferase family, helical bundle domain DYQ48_RS02875 PF00218 Indole-3-glycerol phosphate synthase DYQ48_RS02885 PF00325 Bacterial regulatory proteins, crp family DYQ48_RS02885 PF00027 Cyclic nucleotide-binding domain DYQ48_RS02890 PF02675 S-adenosylmethionine decarboxylase DYQ48_RS02895 PF00893 Small Multidrug Resistance protein DYQ48_RS02900 PF03232 Ubiquinone biosynthesis protein COQ7 DYQ48_RS02905 PF00572 Ribosomal protein L13 DYQ48_RS02910 PF00380 Ribosomal protein S9/S16 DYQ48_RS02925 PF00293 NUDIX domain DYQ48_RS02935 PF00210 Ferritin-like domain DYQ48_RS02940 PF00072 Response regulator receiver domain DYQ48_RS02940 PF01627 Hpt domain DYQ48_RS02940 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS02940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS02940 PF00672 HAMP domain DYQ48_RS02940 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DYQ48_RS02945 PF00486 Transcriptional regulatory protein, C terminal DYQ48_RS02945 PF00072 Response regulator receiver domain DYQ48_RS02965 PF01521 Iron-sulphur cluster biosynthesis DYQ48_RS02975 PF09297 NADH pyrophosphatase zinc ribbon domain DYQ48_RS02975 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DYQ48_RS02975 PF00293 NUDIX domain DYQ48_RS02980 PF17113 Regulatory signalling modulator protein AmpE DYQ48_RS02980 PF03186 CobD/Cbib protein DYQ48_RS03000 PF07690 Major Facilitator Superfamily DYQ48_RS03005 PF12805 FUSC-like inner membrane protein yccS DYQ48_RS03010 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DYQ48_RS03010 PF02843 Phosphoribosylglycinamide synthetase, C domain DYQ48_RS03010 PF02844 Phosphoribosylglycinamide synthetase, N domain DYQ48_RS03015 PF02142 MGS-like domain DYQ48_RS03015 PF01808 AICARFT/IMPCHase bienzyme DYQ48_RS03020 PF00818 Ice nucleation protein repeat DYQ48_RS03020 PF00818 Ice nucleation protein repeat DYQ48_RS03025 PF02954 Bacterial regulatory protein, Fis family DYQ48_RS03040 PF01381 Helix-turn-helix DYQ48_RS03065 PF02785 Biotin carboxylase C-terminal domain DYQ48_RS03065 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DYQ48_RS03065 PF00289 Biotin carboxylase, N-terminal domain DYQ48_RS03075 PF00364 Biotin-requiring enzyme DYQ48_RS03080 PF01220 Dehydroquinase class II DYQ48_RS03090 PF11412 Disulphide bond corrector protein DsbC DYQ48_RS03090 PF02683 Cytochrome C biogenesis protein transmembrane region DYQ48_RS03095 PF03091 CutA1 divalent ion tolerance protein DYQ48_RS03100 PF04231 Endonuclease I DYQ48_RS03105 PF00166 Chaperonin 10 Kd subunit DYQ48_RS03110 PF00118 TCP-1/cpn60 chaperonin family DYQ48_RS03115 PF01738 Dienelactone hydrolase family DYQ48_RS03130 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS03130 PF00593 TonB dependent receptor DYQ48_RS03140 PF07804 HipA-like C-terminal domain DYQ48_RS03145 PF00793 DAHP synthetase I family DYQ48_RS03150 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DYQ48_RS03150 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DYQ48_RS03170 PF16220 Domain of unknown function (DUF4880) DYQ48_RS03170 PF04773 FecR protein DYQ48_RS03175 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS03175 PF07660 Secretin and TonB N terminus short domain DYQ48_RS03175 PF00593 TonB dependent receptor DYQ48_RS03195 PF08335 GlnD PII-uridylyltransferase DYQ48_RS03195 PF03710 Glutamate-ammonia ligase adenylyltransferase DYQ48_RS03200 PF02592 Putative vitamin uptake transporter DYQ48_RS03220 PF00881 Nitroreductase family DYQ48_RS03225 PF04264 YceI-like domain DYQ48_RS03240 PF16957 Malonate decarboxylase, alpha subunit, transporter DYQ48_RS03245 PF06857 Malonate decarboxylase delta subunit (MdcD) DYQ48_RS03250 PF01039 Carboxyl transferase domain DYQ48_RS03260 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG DYQ48_RS03265 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DYQ48_RS03270 PF00698 Acyl transferase domain DYQ48_RS03270 PF16197 Ketoacyl-synthetase C-terminal extension DYQ48_RS03270 PF00109 Beta-ketoacyl synthase, N-terminal domain DYQ48_RS03270 PF02801 Beta-ketoacyl synthase, C-terminal domain DYQ48_RS03270 PF08659 KR domain DYQ48_RS03270 PF00550 Phosphopantetheine attachment site DYQ48_RS03280 PF07729 FCD domain DYQ48_RS03280 PF00392 Bacterial regulatory proteins, gntR family DYQ48_RS03315 PF07745 Glycosyl hydrolase family 53 DYQ48_RS03320 PF17831 Pyruvate dehydrogenase E1 component middle domain DYQ48_RS03320 PF00456 Transketolase, thiamine diphosphate binding domain DYQ48_RS03330 PF00145 C-5 cytosine-specific DNA methylase DYQ48_RS03335 PF03852 DNA mismatch endonuclease Vsr DYQ48_RS03380 PF00580 UvrD/REP helicase N-terminal domain DYQ48_RS03380 PF13361 UvrD-like helicase C-terminal domain DYQ48_RS03485 PF00593 TonB dependent receptor DYQ48_RS03485 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS03490 PF00326 Prolyl oligopeptidase family DYQ48_RS03530 PF13409 Glutathione S-transferase, N-terminal domain DYQ48_RS03565 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DYQ48_RS03565 PF00326 Prolyl oligopeptidase family DYQ48_RS03570 PF07759 Protein of unknown function (DUF1615) DYQ48_RS03575 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS03600 PF00892 EamA-like transporter family DYQ48_RS03605 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYQ48_RS03620 PF00324 Amino acid permease DYQ48_RS03625 PF01544 CorA-like Mg2+ transporter protein DYQ48_RS03640 PF04616 Glycosyl hydrolases family 43 DYQ48_RS03645 PF01204 Trehalase DYQ48_RS03665 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DYQ48_RS03665 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DYQ48_RS03695 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS03695 PF00563 EAL domain DYQ48_RS03695 PF03707 Bacterial signalling protein N terminal repeat DYQ48_RS03705 PF00672 HAMP domain DYQ48_RS03705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS03705 PF02203 Tar ligand binding domain homologue DYQ48_RS03710 PF00150 Cellulase (glycosyl hydrolase family 5) DYQ48_RS03710 PF00553 Cellulose binding domain DYQ48_RS03715 PF00916 Sulfate permease family DYQ48_RS03715 PF01740 STAS domain DYQ48_RS03720 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS03735 PF13632 Glycosyl transferase family group 2 DYQ48_RS03745 PF07694 5TMR of 5TMR-LYT DYQ48_RS03745 PF06580 Histidine kinase DYQ48_RS03750 PF00072 Response regulator receiver domain DYQ48_RS03750 PF04397 LytTr DNA-binding domain DYQ48_RS03755 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DYQ48_RS03755 PF03900 Porphobilinogen deaminase, C-terminal domain DYQ48_RS03780 PF00326 Prolyl oligopeptidase family DYQ48_RS03780 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DYQ48_RS03800 PF00155 Aminotransferase class I and II DYQ48_RS03810 PF00326 Prolyl oligopeptidase family DYQ48_RS03810 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DYQ48_RS03815 PF04304 Protein of unknown function (DUF454) DYQ48_RS03825 PF01678 Diaminopimelate epimerase DYQ48_RS03835 PF02899 Phage integrase, N-terminal SAM-like domain DYQ48_RS03835 PF00589 Phage integrase family DYQ48_RS03840 PF00227 Proteasome subunit DYQ48_RS03845 PF10431 C-terminal, D2-small domain, of ClpB protein DYQ48_RS03845 PF07724 AAA domain (Cdc48 subfamily) DYQ48_RS03845 PF00004 ATPase family associated with various cellular activities (AAA) DYQ48_RS03850 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DYQ48_RS03850 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DYQ48_RS03860 PF13673 Acetyltransferase (GNAT) domain DYQ48_RS03870 PF13533 Biotin-lipoyl like DYQ48_RS03880 PF01209 ubiE/COQ5 methyltransferase family DYQ48_RS03885 PF00563 EAL domain DYQ48_RS03885 PF03707 Bacterial signalling protein N terminal repeat DYQ48_RS03885 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS03890 PF01433 Peptidase family M1 domain DYQ48_RS03890 PF11838 ERAP1-like C-terminal domain DYQ48_RS03910 PF13360 PQQ-like domain DYQ48_RS03915 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYQ48_RS03930 PF08240 Alcohol dehydrogenase GroES-like domain DYQ48_RS03930 PF00107 Zinc-binding dehydrogenase DYQ48_RS03945 PF00158 Sigma-54 interaction domain DYQ48_RS03945 PF01590 GAF domain DYQ48_RS03945 PF02954 Bacterial regulatory protein, Fis family DYQ48_RS03950 PF00294 pfkB family carbohydrate kinase DYQ48_RS03960 PF04085 rod shape-determining protein MreC DYQ48_RS03965 PF04093 rod shape-determining protein MreD DYQ48_RS03970 PF00905 Penicillin binding protein transpeptidase domain DYQ48_RS03970 PF03717 Penicillin-binding Protein dimerisation domain DYQ48_RS03975 PF01098 Cell cycle protein DYQ48_RS03985 PF00295 Glycosyl hydrolases family 28 DYQ48_RS03990 PF13406 Transglycosylase SLT domain DYQ48_RS03995 PF05036 Sporulation related domain DYQ48_RS03995 PF03330 Lytic transglycolase DYQ48_RS04000 PF00768 D-alanyl-D-alanine carboxypeptidase DYQ48_RS04000 PF07943 Penicillin-binding protein 5, C-terminal domain DYQ48_RS04010 PF04359 Protein of unknown function (DUF493) DYQ48_RS04015 PF03099 Biotin/lipoate A/B protein ligase family DYQ48_RS04020 PF04055 Radical SAM superfamily DYQ48_RS04020 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DYQ48_RS04025 PF17804 Tail specific protease N-terminal domain DYQ48_RS04025 PF03572 Peptidase family S41 DYQ48_RS04025 PF11818 C-terminal domain of tail specific protease (DUF3340) DYQ48_RS04025 PF00595 PDZ domain DYQ48_RS04035 PF01467 Cytidylyltransferase-like DYQ48_RS04035 PF00293 NUDIX domain DYQ48_RS04070 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DYQ48_RS04070 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DYQ48_RS04075 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DYQ48_RS04075 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYQ48_RS04080 PF04972 BON domain DYQ48_RS04085 PF01590 GAF domain DYQ48_RS04085 PF08446 PAS fold DYQ48_RS04085 PF00360 Phytochrome region DYQ48_RS04085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS04085 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS04090 PF00072 Response regulator receiver domain DYQ48_RS04095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS04095 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS04100 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DYQ48_RS04145 PF03958 Bacterial type II/III secretion system short domain DYQ48_RS04145 PF00263 Bacterial type II and III secretion system protein DYQ48_RS04150 PF00437 Type II/IV secretion system protein DYQ48_RS04155 PF00482 Type II secretion system (T2SS), protein F DYQ48_RS04160 PF08334 Type II secretion system (T2SS), protein G DYQ48_RS04160 PF07963 Prokaryotic N-terminal methylation motif DYQ48_RS04165 PF12019 Type II transport protein GspH DYQ48_RS04165 PF07963 Prokaryotic N-terminal methylation motif DYQ48_RS04170 PF02501 Type II secretion system (T2SS), protein I DYQ48_RS04170 PF07963 Prokaryotic N-terminal methylation motif DYQ48_RS04175 PF11612 Type II secretion system (T2SS), protein J DYQ48_RS04175 PF07963 Prokaryotic N-terminal methylation motif DYQ48_RS04180 PF03934 Type II secretion system (T2SS), protein K DYQ48_RS04205 PF00703 Glycosyl hydrolases family 2 DYQ48_RS04205 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYQ48_RS04205 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYQ48_RS04205 PF16355 Domain of unknown function (DUF4982) DYQ48_RS04205 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DYQ48_RS04220 PF00392 Bacterial regulatory proteins, gntR family DYQ48_RS04220 PF07702 UTRA domain DYQ48_RS04225 PF07690 Major Facilitator Superfamily DYQ48_RS04230 PF00356 Bacterial regulatory proteins, lacI family DYQ48_RS04235 PF01380 SIS domain DYQ48_RS04240 PF01979 Amidohydrolase family DYQ48_RS04250 PF01743 Poly A polymerase head domain DYQ48_RS04250 PF01966 HD domain DYQ48_RS04250 PF12627 Probable RNA and SrmB- binding site of polymerase A DYQ48_RS04260 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DYQ48_RS04260 PF01464 Transglycosylase SLT domain DYQ48_RS04265 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS04265 PF00593 TonB dependent receptor DYQ48_RS04270 PF00732 GMC oxidoreductase DYQ48_RS04270 PF05199 GMC oxidoreductase DYQ48_RS04275 PF00171 Aldehyde dehydrogenase family DYQ48_RS04280 PF02028 BCCT, betaine/carnitine/choline family transporter DYQ48_RS04290 PF01323 DSBA-like thioredoxin domain DYQ48_RS04300 PF00034 Cytochrome c DYQ48_RS04305 PF01926 50S ribosome-binding GTPase DYQ48_RS04310 PF04107 Glutamate-cysteine ligase family 2(GCS2) DYQ48_RS04315 PF00672 HAMP domain DYQ48_RS04315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS04315 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS04320 PF00486 Transcriptional regulatory protein, C terminal DYQ48_RS04320 PF00072 Response regulator receiver domain DYQ48_RS04335 PF13581 Histidine kinase-like ATPase domain DYQ48_RS04335 PF07536 HWE histidine kinase DYQ48_RS04335 PF13426 PAS domain DYQ48_RS04340 PF02583 Metal-sensitive transcriptional repressor DYQ48_RS04345 PF00107 Zinc-binding dehydrogenase DYQ48_RS04345 PF08240 Alcohol dehydrogenase GroES-like domain DYQ48_RS04350 PF04828 Glutathione-dependent formaldehyde-activating enzyme DYQ48_RS04355 PF00756 Putative esterase DYQ48_RS04360 PF00392 Bacterial regulatory proteins, gntR family DYQ48_RS04360 PF00155 Aminotransferase class I and II DYQ48_RS04365 PF02567 Phenazine biosynthesis-like protein DYQ48_RS04410 PF01979 Amidohydrolase family DYQ48_RS04415 PF01979 Amidohydrolase family DYQ48_RS04430 PF00462 Glutaredoxin DYQ48_RS04435 PF01522 Polysaccharide deacetylase DYQ48_RS04440 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS04440 PF00593 TonB dependent receptor DYQ48_RS04470 PF00155 Aminotransferase class I and II DYQ48_RS04475 PF00664 ABC transporter transmembrane region DYQ48_RS04475 PF03412 Peptidase C39 family DYQ48_RS04475 PF00005 ABC transporter DYQ48_RS04500 PF05598 Transposase domain (DUF772) DYQ48_RS04500 PF01609 Transposase DDE domain DYQ48_RS04510 PF03193 RsgA GTPase DYQ48_RS04535 PF00128 Alpha amylase, catalytic domain DYQ48_RS04550 PF00356 Bacterial regulatory proteins, lacI family DYQ48_RS04555 PF00106 short chain dehydrogenase DYQ48_RS04560 PF03600 Citrate transporter DYQ48_RS04570 PF00486 Transcriptional regulatory protein, C terminal DYQ48_RS04570 PF00072 Response regulator receiver domain DYQ48_RS04575 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS04575 PF08521 Two-component sensor kinase N-terminal DYQ48_RS04575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS04585 PF00072 Response regulator receiver domain DYQ48_RS04585 PF00196 Bacterial regulatory proteins, luxR family DYQ48_RS04590 PF00593 TonB dependent receptor DYQ48_RS04590 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS04600 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS04600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS04610 PF00375 Sodium:dicarboxylate symporter family DYQ48_RS04615 PF01515 Phosphate acetyl/butaryl transferase DYQ48_RS04615 PF00390 Malic enzyme, N-terminal domain DYQ48_RS04615 PF03949 Malic enzyme, NAD binding domain DYQ48_RS04640 PF03279 Bacterial lipid A biosynthesis acyltransferase DYQ48_RS04645 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DYQ48_RS04655 PF02321 Outer membrane efflux protein DYQ48_RS04670 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS04675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS04680 PF00330 Aconitase family (aconitate hydratase) DYQ48_RS04685 PF00694 Aconitase C-terminal domain DYQ48_RS04690 PF08241 Methyltransferase domain DYQ48_RS04695 PF00180 Isocitrate/isopropylmalate dehydrogenase DYQ48_RS04705 PF00682 HMGL-like DYQ48_RS04705 PF08502 LeuA allosteric (dimerisation) domain DYQ48_RS04710 PF00291 Pyridoxal-phosphate dependent enzyme DYQ48_RS04720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYQ48_RS04720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYQ48_RS04720 PF00205 Thiamine pyrophosphate enzyme, central domain DYQ48_RS04725 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DYQ48_RS04725 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DYQ48_RS04735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS04735 PF00672 HAMP domain DYQ48_RS04735 PF12729 Four helix bundle sensory module for signal transduction DYQ48_RS04740 PF07676 WD40-like Beta Propeller Repeat DYQ48_RS04740 PF00326 Prolyl oligopeptidase family DYQ48_RS04750 PF13667 ThiC-associated domain DYQ48_RS04750 PF01964 Radical SAM ThiC family DYQ48_RS04755 PF00486 Transcriptional regulatory protein, C terminal DYQ48_RS04755 PF18500 CadC C-terminal domain 1 DYQ48_RS04760 PF12833 Helix-turn-helix domain DYQ48_RS04765 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS04765 PF00593 TonB dependent receptor DYQ48_RS04775 PF00719 Inorganic pyrophosphatase DYQ48_RS04785 PF03030 Inorganic H+ pyrophosphatase DYQ48_RS04800 PF00365 Phosphofructokinase DYQ48_RS04810 PF08245 Mur ligase middle domain DYQ48_RS04810 PF01225 Mur ligase family, catalytic domain DYQ48_RS04810 PF02875 Mur ligase family, glutamate ligase domain DYQ48_RS04820 PF01062 Bestrophin, RFP-TM, chloride channel DYQ48_RS04830 PF01569 PAP2 superfamily DYQ48_RS04855 PF00027 Cyclic nucleotide-binding domain DYQ48_RS04855 PF00520 Ion transport protein DYQ48_RS04860 PF00202 Aminotransferase class-III DYQ48_RS04875 PF01593 Flavin containing amine oxidoreductase DYQ48_RS04880 PF00034 Cytochrome c DYQ48_RS04880 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DYQ48_RS04890 PF00155 Aminotransferase class I and II DYQ48_RS04895 PF00127 Copper binding proteins, plastocyanin/azurin family DYQ48_RS04900 PF17874 MalT-like TPR region DYQ48_RS04900 PF00196 Bacterial regulatory proteins, luxR family DYQ48_RS04905 PF00202 Aminotransferase class-III DYQ48_RS04920 PF02581 Thiamine monophosphate synthase DYQ48_RS04925 PF00301 Rubredoxin DYQ48_RS04930 PF13369 Transglutaminase-like superfamily DYQ48_RS04940 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DYQ48_RS04950 PF01812 5-formyltetrahydrofolate cyclo-ligase family DYQ48_RS04960 PF05164 Cell division protein ZapA DYQ48_RS04970 PF03695 Uncharacterised protein family (UPF0149) DYQ48_RS04975 PF05195 Aminopeptidase P, N-terminal domain DYQ48_RS04975 PF00557 Metallopeptidase family M24 DYQ48_RS04980 PF00557 Metallopeptidase family M24 DYQ48_RS04995 PF04055 Radical SAM superfamily DYQ48_RS04995 PF06969 HemN C-terminal domain DYQ48_RS05000 PF01725 Ham1 family DYQ48_RS05005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DYQ48_RS05010 PF03725 3' exoribonuclease family, domain 2 DYQ48_RS05010 PF01138 3' exoribonuclease family, domain 1 DYQ48_RS05015 PF03755 YicC-like family, N-terminal region DYQ48_RS05015 PF08340 Domain of unknown function (DUF1732) DYQ48_RS05020 PF00625 Guanylate kinase DYQ48_RS05025 PF01192 RNA polymerase Rpb6 DYQ48_RS05030 PF13291 ACT domain DYQ48_RS05030 PF04607 Region found in RelA / SpoT proteins DYQ48_RS05030 PF02824 TGS domain DYQ48_RS05035 PF01042 Endoribonuclease L-PSP DYQ48_RS05040 PF00270 DEAD/DEAH box helicase DYQ48_RS05040 PF00271 Helicase conserved C-terminal domain DYQ48_RS05040 PF17191 RecG wedge domain DYQ48_RS05045 PF01156 Inosine-uridine preferring nucleoside hydrolase DYQ48_RS05050 PF01197 Ribosomal protein L31 DYQ48_RS05055 PF00285 Citrate synthase, C-terminal domain DYQ48_RS05065 PF00905 Penicillin binding protein transpeptidase domain DYQ48_RS05065 PF00912 Transglycosylase DYQ48_RS05065 PF17092 Penicillin-binding protein OB-like domain DYQ48_RS05070 PF11104 Type IV pilus assembly protein PilM; DYQ48_RS05075 PF05137 Fimbrial assembly protein (PilN) DYQ48_RS05080 PF04350 Pilus assembly protein, PilO DYQ48_RS05085 PF04351 Pilus assembly protein, PilP DYQ48_RS05090 PF00263 Bacterial type II and III secretion system protein DYQ48_RS05090 PF03958 Bacterial type II/III secretion system short domain DYQ48_RS05090 PF11741 AMIN domain DYQ48_RS05090 PF07660 Secretin and TonB N terminus short domain DYQ48_RS05095 PF17863 AAA lid domain DYQ48_RS05095 PF07726 ATPase family associated with various cellular activities (AAA) DYQ48_RS05115 PF13519 von Willebrand factor type A domain DYQ48_RS05115 PF07584 Aerotolerance regulator N-terminal DYQ48_RS05130 PF00375 Sodium:dicarboxylate symporter family DYQ48_RS05135 PF00456 Transketolase, thiamine diphosphate binding domain DYQ48_RS05135 PF02780 Transketolase, C-terminal domain DYQ48_RS05135 PF02779 Transketolase, pyrimidine binding domain DYQ48_RS05145 PF00593 TonB dependent receptor DYQ48_RS05145 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS05150 PF03466 LysR substrate binding domain DYQ48_RS05150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS05170 PF03734 L,D-transpeptidase catalytic domain DYQ48_RS05170 PF01476 LysM domain DYQ48_RS05190 PF03965 Penicillinase repressor DYQ48_RS05205 PF03459 TOBE domain DYQ48_RS05205 PF00005 ABC transporter DYQ48_RS05210 PF00528 Binding-protein-dependent transport system inner membrane component DYQ48_RS05220 PF04273 Putative phosphatase (DUF442) DYQ48_RS05220 PF00753 Metallo-beta-lactamase superfamily DYQ48_RS05230 PF03922 OmpW family DYQ48_RS05245 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DYQ48_RS05245 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DYQ48_RS05270 PF00162 Phosphoglycerate kinase DYQ48_RS05275 PF13419 Haloacid dehalogenase-like hydrolase DYQ48_RS05280 PF00224 Pyruvate kinase, barrel domain DYQ48_RS05280 PF02887 Pyruvate kinase, alpha/beta domain DYQ48_RS05290 PF00274 Fructose-bisphosphate aldolase class-I DYQ48_RS05295 PF01661 Macro domain DYQ48_RS05305 PF00291 Pyridoxal-phosphate dependent enzyme DYQ48_RS05310 PF10414 Sirohaem synthase dimerisation region DYQ48_RS05310 PF14824 Sirohaem biosynthesis protein central DYQ48_RS05310 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYQ48_RS05315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS05315 PF03466 LysR substrate binding domain DYQ48_RS05335 PF00672 HAMP domain DYQ48_RS05335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS05335 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS05335 PF01627 Hpt domain DYQ48_RS05335 PF00072 Response regulator receiver domain DYQ48_RS05355 PF01507 Phosphoadenosine phosphosulfate reductase family DYQ48_RS05360 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DYQ48_RS05360 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DYQ48_RS05365 PF00175 Oxidoreductase NAD-binding domain DYQ48_RS05365 PF00258 Flavodoxin DYQ48_RS05365 PF00667 FAD binding domain DYQ48_RS05370 PF01507 Phosphoadenosine phosphosulfate reductase family DYQ48_RS05375 PF00009 Elongation factor Tu GTP binding domain DYQ48_RS05380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYQ48_RS05380 PF00529 HlyD membrane-fusion protein of T1SS DYQ48_RS05385 PF00873 AcrB/AcrD/AcrF family DYQ48_RS05405 PF00588 SpoU rRNA Methylase family DYQ48_RS05405 PF08032 RNA 2'-O ribose methyltransferase substrate binding DYQ48_RS05410 PF00135 Carboxylesterase family DYQ48_RS05420 PF10566 Glycoside hydrolase 97 DYQ48_RS05420 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation DYQ48_RS05420 PF14508 Glycosyl-hydrolase 97 N-terminal DYQ48_RS05425 PF00703 Glycosyl hydrolases family 2 DYQ48_RS05425 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYQ48_RS05425 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain DYQ48_RS05435 PF00356 Bacterial regulatory proteins, lacI family DYQ48_RS05445 PF01741 Large-conductance mechanosensitive channel, MscL DYQ48_RS05450 PF01557 Fumarylacetoacetate (FAA) hydrolase family DYQ48_RS05465 PF02080 TrkA-C domain DYQ48_RS05465 PF03600 Citrate transporter DYQ48_RS05470 PF02390 Putative methyltransferase DYQ48_RS05480 PF05690 Thiazole biosynthesis protein ThiG DYQ48_RS05490 PF03797 Autotransporter beta-domain DYQ48_RS05490 PF00657 GDSL-like Lipase/Acylhydrolase DYQ48_RS05540 PF04002 RadC-like JAB domain DYQ48_RS05650 PF02534 Type IV secretory system Conjugative DNA transfer DYQ48_RS05675 PF00664 ABC transporter transmembrane region DYQ48_RS05675 PF03412 Peptidase C39 family DYQ48_RS05675 PF00005 ABC transporter DYQ48_RS05695 PF02794 RTX toxin acyltransferase family DYQ48_RS05720 PF06508 Queuosine biosynthesis protein QueC DYQ48_RS05765 PF09335 SNARE associated Golgi protein DYQ48_RS05770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS05770 PF02203 Tar ligand binding domain homologue DYQ48_RS05770 PF00672 HAMP domain DYQ48_RS05800 PF00128 Alpha amylase, catalytic domain DYQ48_RS05800 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DYQ48_RS05805 PF08443 RimK-like ATP-grasp domain DYQ48_RS05805 PF18030 RimK PreATP-grasp domain DYQ48_RS05810 PF00486 Transcriptional regulatory protein, C terminal DYQ48_RS05810 PF00072 Response regulator receiver domain DYQ48_RS05815 PF00989 PAS fold DYQ48_RS05815 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS05815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS05815 PF11808 Phosphate regulon sensor protein PhoR DYQ48_RS05840 PF01121 Dephospho-CoA kinase DYQ48_RS05845 PF06750 Bacterial Peptidase A24 N-terminal domain DYQ48_RS05845 PF01478 Type IV leader peptidase family DYQ48_RS05850 PF00482 Type II secretion system (T2SS), protein F DYQ48_RS05855 PF00114 Pilin (bacterial filament) DYQ48_RS05855 PF07963 Prokaryotic N-terminal methylation motif DYQ48_RS05860 PF00114 Pilin (bacterial filament) DYQ48_RS05860 PF07963 Prokaryotic N-terminal methylation motif DYQ48_RS05865 PF00437 Type II/IV secretion system protein DYQ48_RS05865 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DYQ48_RS05870 PF00158 Sigma-54 interaction domain DYQ48_RS05870 PF00072 Response regulator receiver domain DYQ48_RS05870 PF02954 Bacterial regulatory protein, Fis family DYQ48_RS05875 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS05875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS05880 PF08442 ATP-grasp domain DYQ48_RS05880 PF00549 CoA-ligase DYQ48_RS05885 PF00549 CoA-ligase DYQ48_RS05885 PF02629 CoA binding domain DYQ48_RS05890 PF03466 LysR substrate binding domain DYQ48_RS05890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS05915 PF02540 NAD synthase DYQ48_RS05915 PF00795 Carbon-nitrogen hydrolase DYQ48_RS05925 PF13525 Outer membrane lipoprotein DYQ48_RS05930 PF00849 RNA pseudouridylate synthase DYQ48_RS05935 PF02578 Multi-copper polyphenol oxidoreductase laccase DYQ48_RS05945 PF04134 Protein of unknown function, DUF393 DYQ48_RS05950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS05950 PF00672 HAMP domain DYQ48_RS05950 PF02203 Tar ligand binding domain homologue DYQ48_RS05955 PF01011 PQQ enzyme repeat DYQ48_RS05960 PF00982 Glycosyltransferase family 20 DYQ48_RS05965 PF00723 Glycosyl hydrolases family 15 DYQ48_RS05970 PF02358 Trehalose-phosphatase DYQ48_RS05975 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS05975 PF00593 TonB dependent receptor DYQ48_RS06025 PF01541 GIY-YIG catalytic domain DYQ48_RS06030 PF00593 TonB dependent receptor DYQ48_RS06030 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS06035 PF00296 Luciferase-like monooxygenase DYQ48_RS06040 PF00248 Aldo/keto reductase family DYQ48_RS06045 PF09084 NMT1/THI5 like DYQ48_RS06050 PF00528 Binding-protein-dependent transport system inner membrane component DYQ48_RS06055 PF00005 ABC transporter DYQ48_RS06060 PF00004 ATPase family associated with various cellular activities (AAA) DYQ48_RS06060 PF17871 AAA lid domain DYQ48_RS06060 PF02861 Clp amino terminal domain, pathogenicity island component DYQ48_RS06060 PF10431 C-terminal, D2-small domain, of ClpB protein DYQ48_RS06060 PF07724 AAA domain (Cdc48 subfamily) DYQ48_RS06065 PF01053 Cys/Met metabolism PLP-dependent enzyme DYQ48_RS06070 PF00593 TonB dependent receptor DYQ48_RS06070 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS06080 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DYQ48_RS06085 PF02277 Phosphoribosyltransferase DYQ48_RS06100 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DYQ48_RS06100 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DYQ48_RS06105 PF06276 Ferric iron reductase FhuF-like transporter DYQ48_RS06105 PF04183 IucA / IucC family DYQ48_RS06110 PF07690 Major Facilitator Superfamily DYQ48_RS06115 PF04183 IucA / IucC family DYQ48_RS06115 PF06276 Ferric iron reductase FhuF-like transporter DYQ48_RS06125 PF00593 TonB dependent receptor DYQ48_RS06125 PF07660 Secretin and TonB N terminus short domain DYQ48_RS06125 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS06135 PF02254 TrkA-N domain DYQ48_RS06135 PF00999 Sodium/hydrogen exchanger family DYQ48_RS06140 PF00067 Cytochrome P450 DYQ48_RS06145 PF00593 TonB dependent receptor DYQ48_RS06145 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS06150 PF00593 TonB dependent receptor DYQ48_RS06150 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS06155 PF00593 TonB dependent receptor DYQ48_RS06155 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS06160 PF12848 ABC transporter DYQ48_RS06160 PF00005 ABC transporter DYQ48_RS06170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS06170 PF03466 LysR substrate binding domain DYQ48_RS06185 PF04185 Phosphoesterase family DYQ48_RS06185 PF05506 Domain of unknown function (DUF756) DYQ48_RS06205 PF07690 Major Facilitator Superfamily DYQ48_RS06225 PF02938 GAD domain DYQ48_RS06225 PF00152 tRNA synthetases class II (D, K and N) DYQ48_RS06225 PF01336 OB-fold nucleic acid binding domain DYQ48_RS06245 PF01709 Transcriptional regulator DYQ48_RS06250 PF02075 Crossover junction endodeoxyribonuclease RuvC DYQ48_RS06255 PF07499 RuvA, C-terminal domain DYQ48_RS06255 PF01330 RuvA N terminal domain DYQ48_RS06265 PF02705 K+ potassium transporter DYQ48_RS06270 PF17864 RuvB AAA lid domain DYQ48_RS06270 PF05491 RuvB C-terminal winged helix domain DYQ48_RS06270 PF05496 Holliday junction DNA helicase RuvB P-loop domain DYQ48_RS06275 PF03061 Thioesterase superfamily DYQ48_RS06280 PF01618 MotA/TolQ/ExbB proton channel family DYQ48_RS06285 PF02472 Biopolymer transport protein ExbD/TolR DYQ48_RS06295 PF04052 TolB amino-terminal domain DYQ48_RS06295 PF07676 WD40-like Beta Propeller Repeat DYQ48_RS06300 PF00691 OmpA family DYQ48_RS06310 PF04055 Radical SAM superfamily DYQ48_RS06315 PF00248 Aldo/keto reductase family DYQ48_RS06370 PF13148 Protein of unknown function (DUF3987) DYQ48_RS06390 PF00589 Phage integrase family DYQ48_RS06390 PF13356 Arm DNA-binding domain DYQ48_RS06400 PF06508 Queuosine biosynthesis protein QueC DYQ48_RS06405 PF13426 PAS domain DYQ48_RS06405 PF07536 HWE histidine kinase DYQ48_RS06405 PF13581 Histidine kinase-like ATPase domain DYQ48_RS06415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS06415 PF03466 LysR substrate binding domain DYQ48_RS06420 PF01810 LysE type translocator DYQ48_RS06440 PF00849 RNA pseudouridylate synthase DYQ48_RS06440 PF01479 S4 domain DYQ48_RS06460 PF00271 Helicase conserved C-terminal domain DYQ48_RS06460 PF00270 DEAD/DEAH box helicase DYQ48_RS06460 PF00570 HRDC domain DYQ48_RS06460 PF16124 RecQ zinc-binding DYQ48_RS06460 PF09382 RQC domain DYQ48_RS06465 PF00210 Ferritin-like domain DYQ48_RS06470 PF00271 Helicase conserved C-terminal domain DYQ48_RS06470 PF11898 Domain of unknown function (DUF3418) DYQ48_RS06470 PF00270 DEAD/DEAH box helicase DYQ48_RS06470 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DYQ48_RS06470 PF04408 Helicase associated domain (HA2) DYQ48_RS06480 PF02685 Glucokinase DYQ48_RS06490 PF13186 Iron-sulfur cluster-binding domain DYQ48_RS06490 PF04055 Radical SAM superfamily DYQ48_RS06495 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DYQ48_RS06500 PF03070 TENA/THI-4/PQQC family DYQ48_RS06505 PF12706 Beta-lactamase superfamily domain DYQ48_RS06510 PF08042 PqqA family DYQ48_RS06515 PF13291 ACT domain DYQ48_RS06515 PF04607 Region found in RelA / SpoT proteins DYQ48_RS06515 PF02824 TGS domain DYQ48_RS06530 PF00905 Penicillin binding protein transpeptidase domain DYQ48_RS06530 PF00912 Transglycosylase DYQ48_RS06530 PF14814 Bifunctional transglycosylase second domain DYQ48_RS06540 PF04851 Type III restriction enzyme, res subunit DYQ48_RS06540 PF13307 Helicase C-terminal domain DYQ48_RS06545 PF00814 Glycoprotease family DYQ48_RS06555 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DYQ48_RS06555 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DYQ48_RS06560 PF00072 Response regulator receiver domain DYQ48_RS06565 PF00072 Response regulator receiver domain DYQ48_RS06570 PF01584 CheW-like domain DYQ48_RS06575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS06575 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DYQ48_RS06580 PF01627 Hpt domain DYQ48_RS06580 PF00072 Response regulator receiver domain DYQ48_RS06580 PF02895 Signal transducing histidine kinase, homodimeric domain DYQ48_RS06580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS06580 PF01584 CheW-like domain DYQ48_RS06585 PF00072 Response regulator receiver domain DYQ48_RS06585 PF01339 CheB methylesterase DYQ48_RS06595 PF13302 Acetyltransferase (GNAT) domain DYQ48_RS06615 PF04542 Sigma-70 region 2 DYQ48_RS06615 PF08281 Sigma-70, region 4 DYQ48_RS06620 PF12034 Domain of unknown function (DUF3520) DYQ48_RS06620 PF00092 von Willebrand factor type A domain DYQ48_RS06620 PF12450 von Willebrand factor DYQ48_RS06630 PF01112 Asparaginase DYQ48_RS06635 PF03932 CutC family DYQ48_RS06680 PF01301 Glycosyl hydrolases family 35 DYQ48_RS06685 PF17678 Glycosyl hydrolase family 92 N-terminal domain DYQ48_RS06685 PF07971 Glycosyl hydrolase family 92 DYQ48_RS06695 PF11975 Family 4 glycosyl hydrolase C-terminal domain DYQ48_RS06695 PF02056 Family 4 glycosyl hydrolase DYQ48_RS06705 PF13520 Amino acid permease DYQ48_RS06710 PF01301 Glycosyl hydrolases family 35 DYQ48_RS06720 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYQ48_RS06720 PF00933 Glycosyl hydrolase family 3 N terminal domain DYQ48_RS06720 PF14310 Fibronectin type III-like domain DYQ48_RS06720 PF07691 PA14 domain DYQ48_RS06745 PF01476 LysM domain DYQ48_RS06745 PF00704 Glycosyl hydrolases family 18 DYQ48_RS06760 PF02685 Glucokinase DYQ48_RS06765 PF04452 RNA methyltransferase DYQ48_RS06770 PF00202 Aminotransferase class-III DYQ48_RS06775 PF00293 NUDIX domain DYQ48_RS06780 PF00459 Inositol monophosphatase family DYQ48_RS06785 PF03819 MazG nucleotide pyrophosphohydrolase domain DYQ48_RS06790 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DYQ48_RS06795 PF08669 Glycine cleavage T-protein C-terminal barrel domain DYQ48_RS06795 PF01571 Aminomethyltransferase folate-binding domain DYQ48_RS06800 PF01597 Glycine cleavage H-protein DYQ48_RS06825 PF05598 Transposase domain (DUF772) DYQ48_RS06825 PF01609 Transposase DDE domain DYQ48_RS06835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYQ48_RS06835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYQ48_RS06835 PF09317 Domain of unknown function (DUF1974) DYQ48_RS06840 PF00561 alpha/beta hydrolase fold DYQ48_RS06845 PF00440 Bacterial regulatory proteins, tetR family DYQ48_RS06860 PF16527 Two-component sensor protein CpxA, periplasmic domain DYQ48_RS06860 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS06860 PF00672 HAMP domain DYQ48_RS06865 PF00266 Aminotransferase class-V DYQ48_RS06895 PF01609 Transposase DDE domain DYQ48_RS06895 PF05598 Transposase domain (DUF772) DYQ48_RS06920 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS06920 PF00593 TonB dependent receptor DYQ48_RS06930 PF01430 Hsp33 protein DYQ48_RS06935 PF00912 Transglycosylase DYQ48_RS06940 PF00535 Glycosyl transferase family 2 DYQ48_RS06945 PF00571 CBS domain DYQ48_RS06945 PF00478 IMP dehydrogenase / GMP reductase domain DYQ48_RS06950 PF05170 AsmA family DYQ48_RS06955 PF03006 Haemolysin-III related DYQ48_RS06960 PF00009 Elongation factor Tu GTP binding domain DYQ48_RS06960 PF16658 Class II release factor RF3, C-terminal domain DYQ48_RS06965 PF01551 Peptidase family M23 DYQ48_RS06965 PF08460 Bacterial SH3 domain DYQ48_RS06970 PF00561 alpha/beta hydrolase fold DYQ48_RS06975 PF01053 Cys/Met metabolism PLP-dependent enzyme DYQ48_RS06980 PF00742 Homoserine dehydrogenase DYQ48_RS06980 PF00696 Amino acid kinase family DYQ48_RS06980 PF03447 Homoserine dehydrogenase, NAD binding domain DYQ48_RS06985 PF12697 Alpha/beta hydrolase family DYQ48_RS06990 PF03313 Serine dehydratase alpha chain DYQ48_RS06990 PF03315 Serine dehydratase beta chain DYQ48_RS07005 PF00313 'Cold-shock' DNA-binding domain DYQ48_RS07015 PF01292 Prokaryotic cytochrome b561 DYQ48_RS07020 PF04264 YceI-like domain DYQ48_RS07025 PF00072 Response regulator receiver domain DYQ48_RS07025 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS07025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS07025 PF01627 Hpt domain DYQ48_RS07030 PF00072 Response regulator receiver domain DYQ48_RS07030 PF01627 Hpt domain DYQ48_RS07030 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS07030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS07035 PF00072 Response regulator receiver domain DYQ48_RS07035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS07035 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS07035 PF17149 Periplasmic sensor domain found in signal transduction proteins DYQ48_RS07035 PF00672 HAMP domain DYQ48_RS07035 PF01627 Hpt domain DYQ48_RS07040 PF17149 Periplasmic sensor domain found in signal transduction proteins DYQ48_RS07040 PF01627 Hpt domain DYQ48_RS07040 PF00072 Response regulator receiver domain DYQ48_RS07040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS07040 PF00672 HAMP domain DYQ48_RS07040 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS07045 PF07690 Major Facilitator Superfamily DYQ48_RS07055 PF01175 Urocanase Rossmann-like domain DYQ48_RS07055 PF17392 Urocanase C-terminal domain DYQ48_RS07055 PF17391 Urocanase N-terminal domain DYQ48_RS07065 PF00221 Aromatic amino acid lyase DYQ48_RS07070 PF07969 Amidohydrolase family DYQ48_RS07105 PF01794 Ferric reductase like transmembrane component DYQ48_RS07110 PF00174 Oxidoreductase molybdopterin binding domain DYQ48_RS07115 PF00266 Aminotransferase class-V DYQ48_RS07120 PF01842 ACT domain DYQ48_RS07120 PF01817 Chorismate mutase type II DYQ48_RS07120 PF00800 Prephenate dehydratase DYQ48_RS07125 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DYQ48_RS07135 PF03544 Gram-negative bacterial TonB protein C-terminal DYQ48_RS07140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYQ48_RS07140 PF02403 Seryl-tRNA synthetase N-terminal domain DYQ48_RS07145 PF03466 LysR substrate binding domain DYQ48_RS07145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS07200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS07200 PF00672 HAMP domain DYQ48_RS07200 PF02203 Tar ligand binding domain homologue DYQ48_RS07205 PF01494 FAD binding domain DYQ48_RS07215 PF08448 PAS fold DYQ48_RS07215 PF13188 PAS domain DYQ48_RS07215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS07215 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS07215 PF00072 Response regulator receiver domain DYQ48_RS07220 PF01627 Hpt domain DYQ48_RS07220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS07220 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DYQ48_RS07220 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS07220 PF00672 HAMP domain DYQ48_RS07220 PF00072 Response regulator receiver domain DYQ48_RS07225 PF06745 KaiC DYQ48_RS07230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS07230 PF13426 PAS domain DYQ48_RS07230 PF00072 Response regulator receiver domain DYQ48_RS07245 PF05598 Transposase domain (DUF772) DYQ48_RS07245 PF01609 Transposase DDE domain DYQ48_RS07250 PF04328 Selenoprotein, putative DYQ48_RS07255 PF13722 5TM C-terminal transporter carbon starvation CstA DYQ48_RS07255 PF02554 Carbon starvation protein CstA DYQ48_RS07260 PF05726 Pirin C-terminal cupin domain DYQ48_RS07260 PF02678 Pirin DYQ48_RS07275 PF02678 Pirin DYQ48_RS07275 PF05726 Pirin C-terminal cupin domain DYQ48_RS07280 PF04493 Endonuclease V DYQ48_RS07285 PF00300 Histidine phosphatase superfamily (branch 1) DYQ48_RS07295 PF05649 Peptidase family M13 DYQ48_RS07295 PF01431 Peptidase family M13 DYQ48_RS07300 PF13091 PLD-like domain DYQ48_RS07305 PF01339 CheB methylesterase DYQ48_RS07305 PF00072 Response regulator receiver domain DYQ48_RS07310 PF03705 CheR methyltransferase, all-alpha domain DYQ48_RS07310 PF01739 CheR methyltransferase, SAM binding domain DYQ48_RS07315 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS07315 PF03707 Bacterial signalling protein N terminal repeat DYQ48_RS07315 PF00563 EAL domain DYQ48_RS07320 PF01584 CheW-like domain DYQ48_RS07325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS07325 PF00672 HAMP domain DYQ48_RS07330 PF01627 Hpt domain DYQ48_RS07330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS07330 PF02895 Signal transducing histidine kinase, homodimeric domain DYQ48_RS07330 PF09078 CheY binding DYQ48_RS07330 PF01584 CheW-like domain DYQ48_RS07340 PF00271 Helicase conserved C-terminal domain DYQ48_RS07340 PF03461 TRCF domain DYQ48_RS07340 PF17757 UvrB interaction domain DYQ48_RS07340 PF02559 CarD-like/TRCF domain DYQ48_RS07340 PF00270 DEAD/DEAH box helicase DYQ48_RS07355 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DYQ48_RS07360 PF00072 Response regulator receiver domain DYQ48_RS07360 PF00486 Transcriptional regulatory protein, C terminal DYQ48_RS07365 PF00672 HAMP domain DYQ48_RS07365 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS07365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS07375 PF06123 Inner membrane protein CreD DYQ48_RS07400 PF00749 tRNA synthetases class I (E and Q), catalytic domain DYQ48_RS07405 PF01475 Ferric uptake regulator family DYQ48_RS07415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYQ48_RS07415 PF00529 HlyD membrane-fusion protein of T1SS DYQ48_RS07420 PF00873 AcrB/AcrD/AcrF family DYQ48_RS07425 PF02321 Outer membrane efflux protein DYQ48_RS07430 PF00440 Bacterial regulatory proteins, tetR family DYQ48_RS07430 PF16859 Tetracyclin repressor-like, C-terminal domain DYQ48_RS07435 PF00248 Aldo/keto reductase family DYQ48_RS07440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS07440 PF03466 LysR substrate binding domain DYQ48_RS07460 PF03466 LysR substrate binding domain DYQ48_RS07460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS07465 PF07690 Major Facilitator Superfamily DYQ48_RS07470 PF00248 Aldo/keto reductase family DYQ48_RS07475 PF13860 FlgD Ig-like domain DYQ48_RS07475 PF00082 Subtilase family DYQ48_RS07475 PF02225 PA domain DYQ48_RS07475 PF05922 Peptidase inhibitor I9 DYQ48_RS07485 PF00082 Subtilase family DYQ48_RS07505 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS07505 PF00593 TonB dependent receptor DYQ48_RS07520 PF00654 Voltage gated chloride channel DYQ48_RS07530 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DYQ48_RS07530 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DYQ48_RS07535 PF06029 AlkA N-terminal domain DYQ48_RS07535 PF12833 Helix-turn-helix domain DYQ48_RS07535 PF02805 Metal binding domain of Ada DYQ48_RS07535 PF00730 HhH-GPD superfamily base excision DNA repair protein DYQ48_RS07560 PF01494 FAD binding domain DYQ48_RS07580 PF08281 Sigma-70, region 4 DYQ48_RS07580 PF04542 Sigma-70 region 2 DYQ48_RS07585 PF03880 DbpA RNA binding domain DYQ48_RS07585 PF00271 Helicase conserved C-terminal domain DYQ48_RS07585 PF00270 DEAD/DEAH box helicase DYQ48_RS07590 PF00563 EAL domain DYQ48_RS07590 PF08448 PAS fold DYQ48_RS07590 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS07595 PF01479 S4 domain DYQ48_RS07595 PF00849 RNA pseudouridylate synthase DYQ48_RS07600 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS07615 PF03737 Aldolase/RraA DYQ48_RS07620 PF00144 Beta-lactamase DYQ48_RS07625 PF00999 Sodium/hydrogen exchanger family DYQ48_RS07635 PF00664 ABC transporter transmembrane region DYQ48_RS07635 PF00005 ABC transporter DYQ48_RS07665 PF03466 LysR substrate binding domain DYQ48_RS07665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS07680 PF04070 Domain of unknown function (DUF378) DYQ48_RS07690 PF03466 LysR substrate binding domain DYQ48_RS07690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS07705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYQ48_RS07705 PF00529 HlyD membrane-fusion protein of T1SS DYQ48_RS07710 PF00873 AcrB/AcrD/AcrF family DYQ48_RS07715 PF00106 short chain dehydrogenase DYQ48_RS07720 PF02321 Outer membrane efflux protein DYQ48_RS07725 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS07735 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS07785 PF00082 Subtilase family DYQ48_RS07790 PF01668 SmpB protein DYQ48_RS07800 PF03658 RnfH family Ubiquitin DYQ48_RS07805 PF04355 SmpA / OmlA family DYQ48_RS07810 PF01475 Ferric uptake regulator family DYQ48_RS07815 PF02463 RecF/RecN/SMC N terminal domain DYQ48_RS07820 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DYQ48_RS07820 PF01628 HrcA protein C terminal domain DYQ48_RS07825 PF01025 GrpE DYQ48_RS07830 PF00012 Hsp70 protein DYQ48_RS07835 PF01556 DnaJ C terminal domain DYQ48_RS07835 PF00684 DnaJ central domain DYQ48_RS07835 PF00226 DnaJ domain DYQ48_RS07840 PF08543 Phosphomethylpyrimidine kinase DYQ48_RS07865 PF03412 Peptidase C39 family DYQ48_RS07865 PF00664 ABC transporter transmembrane region DYQ48_RS07865 PF00005 ABC transporter DYQ48_RS07870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS07870 PF03466 LysR substrate binding domain DYQ48_RS07875 PF00664 ABC transporter transmembrane region DYQ48_RS07875 PF00005 ABC transporter DYQ48_RS07880 PF01205 Uncharacterized protein family UPF0029 DYQ48_RS07885 PF03641 Possible lysine decarboxylase DYQ48_RS07890 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYQ48_RS07890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYQ48_RS07895 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DYQ48_RS07895 PF00364 Biotin-requiring enzyme DYQ48_RS07895 PF02817 e3 binding domain DYQ48_RS07900 PF02779 Transketolase, pyrimidine binding domain DYQ48_RS07900 PF16870 2-oxoglutarate dehydrogenase C-terminal DYQ48_RS07900 PF00676 Dehydrogenase E1 component DYQ48_RS07900 PF16078 2-oxoglutarate dehydrogenase N-terminus DYQ48_RS07910 PF08007 Cupin superfamily protein DYQ48_RS07925 PF00206 Lyase DYQ48_RS07925 PF08328 Adenylosuccinate lyase C-terminal DYQ48_RS07930 PF01595 Cyclin M transmembrane N-terminal domain DYQ48_RS07930 PF03471 Transporter associated domain DYQ48_RS07930 PF00571 CBS domain DYQ48_RS07935 PF00206 Lyase DYQ48_RS07935 PF10415 Fumarase C C-terminus DYQ48_RS07960 PF00005 ABC transporter DYQ48_RS07965 PF00392 Bacterial regulatory proteins, gntR family DYQ48_RS07975 PF00255 Glutathione peroxidase DYQ48_RS07980 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DYQ48_RS07980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYQ48_RS07985 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DYQ48_RS07985 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DYQ48_RS07985 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DYQ48_RS07990 PF04102 SlyX DYQ48_RS08005 PF00356 Bacterial regulatory proteins, lacI family DYQ48_RS08015 PF00294 pfkB family carbohydrate kinase DYQ48_RS08030 PF02965 Vitamin B12 dependent methionine synthase, activation domain DYQ48_RS08030 PF02310 B12 binding domain DYQ48_RS08030 PF00809 Pterin binding enzyme DYQ48_RS08030 PF02607 B12 binding domain DYQ48_RS08030 PF02574 Homocysteine S-methyltransferase DYQ48_RS08035 PF02607 B12 binding domain DYQ48_RS08035 PF02965 Vitamin B12 dependent methionine synthase, activation domain DYQ48_RS08035 PF00809 Pterin binding enzyme DYQ48_RS08035 PF02574 Homocysteine S-methyltransferase DYQ48_RS08035 PF02310 B12 binding domain DYQ48_RS08040 PF01209 ubiE/COQ5 methyltransferase family DYQ48_RS08045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYQ48_RS08045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYQ48_RS08045 PF02770 Acyl-CoA dehydrogenase, middle domain DYQ48_RS08060 PF00773 RNB domain DYQ48_RS08060 PF08206 Ribonuclease B OB domain DYQ48_RS08060 PF08461 Ribonuclease R winged-helix domain DYQ48_RS08060 PF17876 Cold shock domain DYQ48_RS08060 PF00575 S1 RNA binding domain DYQ48_RS08070 PF00588 SpoU rRNA Methylase family DYQ48_RS08070 PF08032 RNA 2'-O ribose methyltransferase substrate binding DYQ48_RS08075 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS08080 PF00929 Exonuclease DYQ48_RS08090 PF01895 PhoU domain DYQ48_RS08095 PF00005 ABC transporter DYQ48_RS08100 PF00528 Binding-protein-dependent transport system inner membrane component DYQ48_RS08105 PF00528 Binding-protein-dependent transport system inner membrane component DYQ48_RS08110 PF12849 PBP superfamily domain DYQ48_RS08115 PF12849 PBP superfamily domain DYQ48_RS08130 PF00484 Carbonic anhydrase DYQ48_RS08135 PF00916 Sulfate permease family DYQ48_RS08135 PF01740 STAS domain DYQ48_RS08145 PF10576 Iron-sulfur binding domain of endonuclease III DYQ48_RS08145 PF00633 Helix-hairpin-helix motif DYQ48_RS08145 PF00730 HhH-GPD superfamily base excision DNA repair protein DYQ48_RS08155 PF00378 Enoyl-CoA hydratase/isomerase DYQ48_RS08160 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DYQ48_RS08160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYQ48_RS08165 PF00293 NUDIX domain DYQ48_RS08170 PF00581 Rhodanese-like domain DYQ48_RS08200 PF00005 ABC transporter DYQ48_RS08200 PF16326 ABC transporter C-terminal domain DYQ48_RS08200 PF12848 ABC transporter DYQ48_RS08210 PF10672 S-adenosylmethionine-dependent methyltransferase DYQ48_RS08210 PF02926 THUMP domain DYQ48_RS08210 PF01170 Putative RNA methylase family UPF0020 DYQ48_RS08215 PF01513 ATP-NAD kinase DYQ48_RS08240 PF00929 Exonuclease DYQ48_RS08240 PF08411 Exonuclease C-terminal DYQ48_RS08245 PF01494 FAD binding domain DYQ48_RS08250 PF00266 Aminotransferase class-V DYQ48_RS08260 PF06052 3-hydroxyanthranilic acid dioxygenase DYQ48_RS08265 PF00484 Carbonic anhydrase DYQ48_RS08270 PF04299 Putative FMN-binding domain DYQ48_RS08285 PF00152 tRNA synthetases class II (D, K and N) DYQ48_RS08285 PF01336 OB-fold nucleic acid binding domain DYQ48_RS08290 PF01521 Iron-sulphur cluster biosynthesis DYQ48_RS08295 PF01250 Ribosomal protein S6 DYQ48_RS08300 PF01084 Ribosomal protein S18 DYQ48_RS08305 PF01281 Ribosomal protein L9, N-terminal domain DYQ48_RS08305 PF03948 Ribosomal protein L9, C-terminal domain DYQ48_RS08310 PF02463 RecF/RecN/SMC N terminal domain DYQ48_RS08315 PF04354 ZipA, C-terminal FtsZ-binding domain DYQ48_RS08320 PF00155 Aminotransferase class I and II DYQ48_RS08325 PF00533 BRCA1 C Terminus (BRCT) domain DYQ48_RS08325 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DYQ48_RS08325 PF03120 NAD-dependent DNA ligase OB-fold domain DYQ48_RS08325 PF01653 NAD-dependent DNA ligase adenylation domain DYQ48_RS08325 PF12826 Helix-hairpin-helix motif DYQ48_RS08330 PF00152 tRNA synthetases class II (D, K and N) DYQ48_RS08340 PF01008 Initiation factor 2 subunit family DYQ48_RS08345 PF03989 DNA gyrase C-terminal domain, beta-propeller DYQ48_RS08345 PF00521 DNA gyrase/topoisomerase IV, subunit A DYQ48_RS08370 PF00483 Nucleotidyl transferase DYQ48_RS08375 PF01636 Phosphotransferase enzyme family DYQ48_RS08385 PF07687 Peptidase dimerisation domain DYQ48_RS08385 PF01546 Peptidase family M20/M25/M40 DYQ48_RS08400 PF00175 Oxidoreductase NAD-binding domain DYQ48_RS08400 PF00667 FAD binding domain DYQ48_RS08400 PF00258 Flavodoxin DYQ48_RS08405 PF02424 ApbE family DYQ48_RS08430 PF13640 2OG-Fe(II) oxygenase superfamily DYQ48_RS08430 PF18331 PKHD-type hydroxylase C-terminal domain DYQ48_RS08435 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS08435 PF00593 TonB dependent receptor DYQ48_RS08445 PF00355 Rieske [2Fe-2S] domain DYQ48_RS08450 PF00583 Acetyltransferase (GNAT) family DYQ48_RS08455 PF00266 Aminotransferase class-V DYQ48_RS08460 PF01458 Uncharacterized protein family (UPF0051) DYQ48_RS08465 PF00005 ABC transporter DYQ48_RS08470 PF01458 Uncharacterized protein family (UPF0051) DYQ48_RS08475 PF02082 Transcriptional regulator DYQ48_RS08500 PF01551 Peptidase family M23 DYQ48_RS08500 PF01476 LysM domain DYQ48_RS08510 PF03807 NADP oxidoreductase coenzyme F420-dependent DYQ48_RS08510 PF14748 Pyrroline-5-carboxylate reductase dimerisation DYQ48_RS08515 PF01168 Alanine racemase, N-terminal domain DYQ48_RS08520 PF00437 Type II/IV secretion system protein DYQ48_RS08525 PF00437 Type II/IV secretion system protein DYQ48_RS08535 PF13673 Acetyltransferase (GNAT) domain DYQ48_RS08535 PF00117 Glutamine amidotransferase class-I DYQ48_RS08535 PF13302 Acetyltransferase (GNAT) domain DYQ48_RS08535 PF00958 GMP synthase C terminal domain DYQ48_RS08535 PF03352 Methyladenine glycosylase DYQ48_RS08545 PF02622 Uncharacterized ACR, COG1678 DYQ48_RS08550 PF03652 Holliday junction resolvase DYQ48_RS08555 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DYQ48_RS08555 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DYQ48_RS08560 PF02566 OsmC-like protein DYQ48_RS08570 PF02567 Phenazine biosynthesis-like protein DYQ48_RS08575 PF02567 Phenazine biosynthesis-like protein DYQ48_RS08580 PF00696 Amino acid kinase family DYQ48_RS08580 PF01842 ACT domain DYQ48_RS08595 PF08245 Mur ligase middle domain DYQ48_RS08600 PF00348 Polyprenyl synthetase DYQ48_RS08605 PF00436 Single-strand binding protein family DYQ48_RS08610 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS08610 PF00593 TonB dependent receptor DYQ48_RS08615 PF07676 WD40-like Beta Propeller Repeat DYQ48_RS08615 PF04052 TolB amino-terminal domain DYQ48_RS08620 PF01590 GAF domain DYQ48_RS08620 PF00563 EAL domain DYQ48_RS08620 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS08620 PF00360 Phytochrome region DYQ48_RS08625 PF01799 [2Fe-2S] binding domain DYQ48_RS08625 PF00111 2Fe-2S iron-sulfur cluster binding domain DYQ48_RS08625 PF10518 TAT (twin-arginine translocation) pathway signal sequence DYQ48_RS08630 PF03450 CO dehydrogenase flavoprotein C-terminal domain DYQ48_RS08630 PF00941 FAD binding domain in molybdopterin dehydrogenase DYQ48_RS08635 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DYQ48_RS08635 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DYQ48_RS08640 PF13478 XdhC Rossmann domain DYQ48_RS08640 PF02625 XdhC and CoxI family DYQ48_RS08645 PF12804 MobA-like NTP transferase domain DYQ48_RS08670 PF13419 Haloacid dehalogenase-like hydrolase DYQ48_RS08700 PF03918 Cytochrome C biogenesis protein DYQ48_RS08705 PF08534 Redoxin DYQ48_RS08710 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DYQ48_RS08710 PF01578 Cytochrome C assembly protein DYQ48_RS08715 PF03100 CcmE DYQ48_RS08720 PF04995 Heme exporter protein D (CcmD) DYQ48_RS08725 PF01578 Cytochrome C assembly protein DYQ48_RS08730 PF00082 Subtilase family DYQ48_RS08740 PF08281 Sigma-70, region 4 DYQ48_RS08740 PF04542 Sigma-70 region 2 DYQ48_RS08750 PF00034 Cytochrome c DYQ48_RS08765 PF05523 WxcM-like, C-terminal DYQ48_RS08770 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DYQ48_RS08775 PF01943 Polysaccharide biosynthesis protein DYQ48_RS08780 PF00535 Glycosyl transferase family 2 DYQ48_RS08810 PF00534 Glycosyl transferases group 1 DYQ48_RS08810 PF13439 Glycosyltransferase Family 4 DYQ48_RS08815 PF00534 Glycosyl transferases group 1 DYQ48_RS08815 PF13579 Glycosyl transferase 4-like domain DYQ48_RS08830 PF06745 KaiC DYQ48_RS08835 PF00005 ABC transporter DYQ48_RS08835 PF00664 ABC transporter transmembrane region DYQ48_RS08840 PF07690 Major Facilitator Superfamily DYQ48_RS08845 PF00296 Luciferase-like monooxygenase DYQ48_RS08860 PF01595 Cyclin M transmembrane N-terminal domain DYQ48_RS08860 PF03471 Transporter associated domain DYQ48_RS08860 PF00571 CBS domain DYQ48_RS08875 PF01384 Phosphate transporter family DYQ48_RS08890 PF00204 DNA gyrase B DYQ48_RS08890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS08890 PF01751 Toprim domain DYQ48_RS08890 PF00986 DNA gyrase B subunit, carboxyl terminus DYQ48_RS08900 PF06418 CTP synthase N-terminus DYQ48_RS08900 PF00117 Glutamine amidotransferase class-I DYQ48_RS08905 PF00793 DAHP synthetase I family DYQ48_RS08915 PF00113 Enolase, C-terminal TIM barrel domain DYQ48_RS08915 PF03952 Enolase, N-terminal domain DYQ48_RS08920 PF04977 Septum formation initiator DYQ48_RS08925 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DYQ48_RS08930 PF02542 YgbB family DYQ48_RS08935 PF01142 tRNA pseudouridine synthase D (TruD) DYQ48_RS08940 PF01713 Smr domain DYQ48_RS08945 PF01975 Survival protein SurE DYQ48_RS08955 PF09335 SNARE associated Golgi protein DYQ48_RS08960 PF01551 Peptidase family M23 DYQ48_RS08960 PF01476 LysM domain DYQ48_RS08970 PF01985 CRS1 / YhbY (CRM) domain DYQ48_RS08975 PF01728 FtsJ-like methyltransferase DYQ48_RS08980 PF00004 ATPase family associated with various cellular activities (AAA) DYQ48_RS08980 PF01434 Peptidase family M41 DYQ48_RS08980 PF17862 AAA+ lid domain DYQ48_RS08980 PF06480 FtsH Extracellular DYQ48_RS08985 PF00809 Pterin binding enzyme DYQ48_RS08995 PF17209 Hfq protein DYQ48_RS09000 PF13167 GTP-binding GTPase N-terminal DYQ48_RS09000 PF16360 GTP-binding GTPase Middle Region DYQ48_RS09000 PF01926 50S ribosome-binding GTPase DYQ48_RS09005 PF02464 Competence-damaged protein DYQ48_RS09010 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS09010 PF00593 TonB dependent receptor DYQ48_RS09015 PF03109 ABC1 family DYQ48_RS09020 PF01726 LexA DNA binding domain DYQ48_RS09020 PF00717 Peptidase S24-like DYQ48_RS09025 PF00154 recA bacterial DNA recombination protein DYQ48_RS09030 PF02631 RecX family DYQ48_RS09035 PF02272 DHHA1 domain DYQ48_RS09035 PF01411 tRNA synthetases class II (A) DYQ48_RS09035 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DYQ48_RS09040 PF02599 Global regulator protein family DYQ48_RS09050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS09050 PF13426 PAS domain DYQ48_RS09050 PF08447 PAS fold DYQ48_RS09055 PF02678 Pirin DYQ48_RS09055 PF17954 Quercetinase C-terminal cupin domain DYQ48_RS09080 PF08543 Phosphomethylpyrimidine kinase DYQ48_RS09080 PF02581 Thiamine monophosphate synthase DYQ48_RS09095 PF13638 PIN domain DYQ48_RS09095 PF02562 PhoH-like protein DYQ48_RS09100 PF00578 AhpC/TSA family DYQ48_RS09115 PF00701 Dihydrodipicolinate synthetase family DYQ48_RS09125 PF11953 Domain of unknown function (DUF3470) DYQ48_RS09125 PF00037 4Fe-4S binding domain DYQ48_RS09135 PF08450 SMP-30/Gluconolactonase/LRE-like region DYQ48_RS09140 PF13378 Enolase C-terminal domain-like DYQ48_RS09140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DYQ48_RS09145 PF01081 KDPG and KHG aldolase DYQ48_RS09150 PF03466 LysR substrate binding domain DYQ48_RS09150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS09165 PF00942 Cellulose binding domain DYQ48_RS09165 PF03442 Carbohydrate binding domain X2 DYQ48_RS09180 PF17137 Domain of unknown function (DUF5110) DYQ48_RS09180 PF01055 Glycosyl hydrolases family 31 DYQ48_RS09180 PF16338 Domain of unknown function (DUF4968) DYQ48_RS09190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DYQ48_RS09190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DYQ48_RS09200 PF00083 Sugar (and other) transporter DYQ48_RS09220 PF01520 N-acetylmuramoyl-L-alanine amidase DYQ48_RS09225 PF02649 Type I GTP cyclohydrolase folE2 DYQ48_RS09235 PF01743 Poly A polymerase head domain DYQ48_RS09235 PF12626 Polymerase A arginine-rich C-terminus DYQ48_RS09235 PF12627 Probable RNA and SrmB- binding site of polymerase A DYQ48_RS09240 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DYQ48_RS09245 PF02548 Ketopantoate hydroxymethyltransferase DYQ48_RS09250 PF02569 Pantoate-beta-alanine ligase DYQ48_RS09255 PF02261 Aspartate decarboxylase DYQ48_RS09260 PF00342 Phosphoglucose isomerase DYQ48_RS09290 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYQ48_RS09290 PF00933 Glycosyl hydrolase family 3 N terminal domain DYQ48_RS09290 PF14310 Fibronectin type III-like domain DYQ48_RS09300 PF00474 Sodium:solute symporter family DYQ48_RS09305 PF00360 Phytochrome region DYQ48_RS09305 PF00563 EAL domain DYQ48_RS09305 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS09305 PF01590 GAF domain DYQ48_RS09310 PF00150 Cellulase (glycosyl hydrolase family 5) DYQ48_RS09310 PF02013 Cellulose or protein binding domain DYQ48_RS09320 PF00072 Response regulator receiver domain DYQ48_RS09330 PF04551 GcpE protein DYQ48_RS09335 PF01569 PAP2 superfamily DYQ48_RS09340 PF07690 Major Facilitator Superfamily DYQ48_RS09350 PF00892 EamA-like transporter family DYQ48_RS09355 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DYQ48_RS09355 PF01565 FAD binding domain DYQ48_RS09360 PF01180 Dihydroorotate dehydrogenase DYQ48_RS09375 PF00171 Aldehyde dehydrogenase family DYQ48_RS09425 PF00535 Glycosyl transferase family 2 DYQ48_RS09430 PF14883 Hypothetical glycosyl hydrolase family 13 DYQ48_RS09430 PF01522 Polysaccharide deacetylase DYQ48_RS09440 PF17287 POTRA domain DYQ48_RS09440 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DYQ48_RS09440 PF08479 POTRA domain, ShlB-type DYQ48_RS09460 PF03073 TspO/MBR family DYQ48_RS09465 PF00742 Homoserine dehydrogenase DYQ48_RS09465 PF03447 Homoserine dehydrogenase, NAD binding domain DYQ48_RS09465 PF13840 ACT domain DYQ48_RS09465 PF01842 ACT domain DYQ48_RS09465 PF00696 Amino acid kinase family DYQ48_RS09470 PF08544 GHMP kinases C terminal DYQ48_RS09470 PF00288 GHMP kinases N terminal domain DYQ48_RS09480 PF14821 Threonine synthase N terminus DYQ48_RS09480 PF00291 Pyridoxal-phosphate dependent enzyme DYQ48_RS09490 PF00027 Cyclic nucleotide-binding domain DYQ48_RS09490 PF13545 Crp-like helix-turn-helix domain DYQ48_RS09495 PF03129 Anticodon binding domain DYQ48_RS09495 PF13393 Histidyl-tRNA synthetase DYQ48_RS09510 PF01634 ATP phosphoribosyltransferase DYQ48_RS09510 PF08029 HisG, C-terminal domain DYQ48_RS09515 PF00815 Histidinol dehydrogenase DYQ48_RS09520 PF00155 Aminotransferase class I and II DYQ48_RS09525 PF00475 Imidazoleglycerol-phosphate dehydratase DYQ48_RS09530 PF00117 Glutamine amidotransferase class-I DYQ48_RS09535 PF00977 Histidine biosynthesis protein DYQ48_RS09540 PF00977 Histidine biosynthesis protein DYQ48_RS09545 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DYQ48_RS09545 PF01502 Phosphoribosyl-AMP cyclohydrolase DYQ48_RS09565 PF03079 ARD/ARD' family DYQ48_RS09570 PF00596 Class II Aldolase and Adducin N-terminal domain DYQ48_RS09580 PF13520 Amino acid permease DYQ48_RS09585 PF13520 Amino acid permease DYQ48_RS09600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYQ48_RS09600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYQ48_RS09605 PF02913 FAD linked oxidases, C-terminal domain DYQ48_RS09605 PF01565 FAD binding domain DYQ48_RS09625 PF08207 Elongation factor P (EF-P) KOW-like domain DYQ48_RS09625 PF01132 Elongation factor P (EF-P) OB domain DYQ48_RS09625 PF09285 Elongation factor P, C-terminal DYQ48_RS09630 PF00106 short chain dehydrogenase DYQ48_RS09635 PF00682 HMGL-like DYQ48_RS09640 PF00378 Enoyl-CoA hydratase/isomerase DYQ48_RS09650 PF07670 Nucleoside recognition DYQ48_RS09650 PF02421 Ferrous iron transport protein B DYQ48_RS09650 PF07664 Ferrous iron transport protein B C terminus DYQ48_RS09660 PF00155 Aminotransferase class I and II DYQ48_RS09665 PF03473 MOSC domain DYQ48_RS09665 PF03475 3-alpha domain DYQ48_RS09670 PF01113 Dihydrodipicolinate reductase, N-terminus DYQ48_RS09670 PF05173 Dihydrodipicolinate reductase, C-terminus DYQ48_RS09675 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DYQ48_RS09675 PF00117 Glutamine amidotransferase class-I DYQ48_RS09685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DYQ48_RS09685 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DYQ48_RS09685 PF02142 MGS-like domain DYQ48_RS09690 PF03449 Transcription elongation factor, N-terminal DYQ48_RS09690 PF01272 Transcription elongation factor, GreA/GreB, C-term DYQ48_RS09700 PF17768 RecJ OB domain DYQ48_RS09700 PF02272 DHHA1 domain DYQ48_RS09700 PF01368 DHH family DYQ48_RS09715 PF04397 LytTr DNA-binding domain DYQ48_RS09715 PF00072 Response regulator receiver domain DYQ48_RS09725 PF00152 tRNA synthetases class II (D, K and N) DYQ48_RS09725 PF01336 OB-fold nucleic acid binding domain DYQ48_RS09730 PF00072 Response regulator receiver domain DYQ48_RS09735 PF00072 Response regulator receiver domain DYQ48_RS09735 PF01627 Hpt domain DYQ48_RS09735 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS09735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS09740 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS09740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS09740 PF01627 Hpt domain DYQ48_RS09740 PF00072 Response regulator receiver domain DYQ48_RS09750 PF00501 AMP-binding enzyme DYQ48_RS09750 PF13193 AMP-binding enzyme C-terminal domain DYQ48_RS09760 PF00694 Aconitase C-terminal domain DYQ48_RS09760 PF00330 Aconitase family (aconitate hydratase) DYQ48_RS09775 PF00330 Aconitase family (aconitate hydratase) DYQ48_RS09775 PF06434 Aconitate hydratase 2 N-terminus DYQ48_RS09775 PF11791 Aconitate B N-terminal domain DYQ48_RS09780 PF00561 alpha/beta hydrolase fold DYQ48_RS09795 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS09795 PF00563 EAL domain DYQ48_RS09795 PF03707 Bacterial signalling protein N terminal repeat DYQ48_RS09800 PF00072 Response regulator receiver domain DYQ48_RS09800 PF01339 CheB methylesterase DYQ48_RS09805 PF03975 CheD chemotactic sensory transduction DYQ48_RS09810 PF01739 CheR methyltransferase, SAM binding domain DYQ48_RS09810 PF03705 CheR methyltransferase, all-alpha domain DYQ48_RS09815 PF02203 Tar ligand binding domain homologue DYQ48_RS09815 PF00672 HAMP domain DYQ48_RS09815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS09825 PF01584 CheW-like domain DYQ48_RS09830 PF07317 Flagellar regulator YcgR DYQ48_RS09830 PF07238 PilZ domain DYQ48_RS09840 PF02203 Tar ligand binding domain homologue DYQ48_RS09840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS09840 PF00672 HAMP domain DYQ48_RS09845 PF02203 Tar ligand binding domain homologue DYQ48_RS09845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS09845 PF00672 HAMP domain DYQ48_RS09850 PF02203 Tar ligand binding domain homologue DYQ48_RS09850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS09850 PF00672 HAMP domain DYQ48_RS09855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS09855 PF02203 Tar ligand binding domain homologue DYQ48_RS09855 PF00672 HAMP domain DYQ48_RS09860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS09860 PF02203 Tar ligand binding domain homologue DYQ48_RS09860 PF00672 HAMP domain DYQ48_RS09865 PF00672 HAMP domain DYQ48_RS09865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS09870 PF02203 Tar ligand binding domain homologue DYQ48_RS09870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS09870 PF00672 HAMP domain DYQ48_RS09875 PF00672 HAMP domain DYQ48_RS09875 PF17200 Single Cache domain 2 DYQ48_RS09875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS09895 PF02203 Tar ligand binding domain homologue DYQ48_RS09895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS09895 PF00672 HAMP domain DYQ48_RS09905 PF01584 CheW-like domain DYQ48_RS09905 PF09078 CheY binding DYQ48_RS09905 PF02895 Signal transducing histidine kinase, homodimeric domain DYQ48_RS09905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS09905 PF01627 Hpt domain DYQ48_RS09910 PF00072 Response regulator receiver domain DYQ48_RS09920 PF01584 CheW-like domain DYQ48_RS09925 PF13614 AAA domain DYQ48_RS09930 PF00691 OmpA family DYQ48_RS09930 PF13677 Membrane MotB of proton-channel complex MotA/MotB DYQ48_RS09935 PF01618 MotA/TolQ/ExbB proton channel family DYQ48_RS09945 PF01381 Helix-turn-helix DYQ48_RS09950 PF00072 Response regulator receiver domain DYQ48_RS09950 PF02895 Signal transducing histidine kinase, homodimeric domain DYQ48_RS09950 PF01584 CheW-like domain DYQ48_RS09950 PF01627 Hpt domain DYQ48_RS09950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS09955 PF04344 Chemotaxis phosphatase, CheZ DYQ48_RS09960 PF00072 Response regulator receiver domain DYQ48_RS09965 PF04545 Sigma-70, region 4 DYQ48_RS09965 PF04542 Sigma-70 region 2 DYQ48_RS09965 PF04539 Sigma-70 region 3 DYQ48_RS09970 PF10609 NUBPL iron-transfer P-loop NTPase DYQ48_RS09975 PF00448 SRP54-type protein, GTPase domain DYQ48_RS09985 PF00771 FHIPEP family DYQ48_RS09990 PF01312 FlhB HrpN YscU SpaS Family DYQ48_RS09995 PF03707 Bacterial signalling protein N terminal repeat DYQ48_RS09995 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS09995 PF00563 EAL domain DYQ48_RS10000 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS10005 PF13188 PAS domain DYQ48_RS10005 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS10005 PF00563 EAL domain DYQ48_RS10005 PF03707 Bacterial signalling protein N terminal repeat DYQ48_RS10010 PF01311 Bacterial export proteins, family 1 DYQ48_RS10015 PF01313 Bacterial export proteins, family 3 DYQ48_RS10020 PF00813 FliP family DYQ48_RS10025 PF04347 Flagellar biosynthesis protein, FliO DYQ48_RS10030 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DYQ48_RS10035 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DYQ48_RS10035 PF02154 Flagellar motor switch protein FliM DYQ48_RS10055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYQ48_RS10055 PF18269 T3SS EscN ATPase C-terminal domain DYQ48_RS10065 PF01706 FliG C-terminal domain DYQ48_RS10065 PF14841 FliG middle domain DYQ48_RS10065 PF14842 FliG N-terminal domain DYQ48_RS10070 PF08345 Flagellar M-ring protein C-terminal DYQ48_RS10070 PF01514 Secretory protein of YscJ/FliF family DYQ48_RS10075 PF02049 Flagellar hook-basal body complex protein FliE DYQ48_RS10080 PF05598 Transposase domain (DUF772) DYQ48_RS10080 PF01609 Transposase DDE domain DYQ48_RS10100 PF00534 Glycosyl transferases group 1 DYQ48_RS10100 PF00535 Glycosyl transferase family 2 DYQ48_RS10110 PF04230 Polysaccharide pyruvyl transferase DYQ48_RS10145 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DYQ48_RS10145 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DYQ48_RS10155 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DYQ48_RS10160 PF06490 Flagellar regulatory protein FleQ DYQ48_RS10160 PF00158 Sigma-54 interaction domain DYQ48_RS10160 PF02954 Bacterial regulatory protein, Fis family DYQ48_RS10165 PF01339 CheB methylesterase DYQ48_RS10165 PF00072 Response regulator receiver domain DYQ48_RS10170 PF00309 Sigma-54 factor, Activator interacting domain (AID) DYQ48_RS10170 PF04552 Sigma-54, DNA binding domain DYQ48_RS10170 PF04963 Sigma-54 factor, core binding domain DYQ48_RS10175 PF00072 Response regulator receiver domain DYQ48_RS10175 PF00196 Bacterial regulatory proteins, luxR family DYQ48_RS10190 PF02561 Flagellar protein FliS DYQ48_RS10195 PF07195 Flagellar hook-associated protein 2 C-terminus DYQ48_RS10195 PF07196 Flagellin hook IN motif DYQ48_RS10195 PF02465 Flagellar hook-associated protein 2 N-terminus DYQ48_RS10200 PF00700 Bacterial flagellin C-terminal helical region DYQ48_RS10200 PF00669 Bacterial flagellin N-terminal helical region DYQ48_RS10210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYQ48_RS10210 PF07196 Flagellin hook IN motif DYQ48_RS10215 PF10135 Rod binding protein DYQ48_RS10215 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DYQ48_RS10220 PF02119 Flagellar P-ring protein DYQ48_RS10225 PF02107 Flagellar L-ring protein DYQ48_RS10230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYQ48_RS10230 PF00460 Flagella basal body rod protein DYQ48_RS10235 PF00460 Flagella basal body rod protein DYQ48_RS10235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYQ48_RS10240 PF07559 Flagellar basal body protein FlaE DYQ48_RS10240 PF00460 Flagella basal body rod protein DYQ48_RS10240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYQ48_RS10245 PF03963 Flagellar hook capping protein - N-terminal region DYQ48_RS10250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYQ48_RS10250 PF00460 Flagella basal body rod protein DYQ48_RS10260 PF01584 CheW-like domain DYQ48_RS10260 PF00072 Response regulator receiver domain DYQ48_RS10280 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS10280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS10285 PF00563 EAL domain DYQ48_RS10285 PF03707 Bacterial signalling protein N terminal repeat DYQ48_RS10285 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS10290 PF07730 Histidine kinase DYQ48_RS10290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS10295 PF03707 Bacterial signalling protein N terminal repeat DYQ48_RS10295 PF00563 EAL domain DYQ48_RS10295 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS10315 PF12729 Four helix bundle sensory module for signal transduction DYQ48_RS10315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS10315 PF00672 HAMP domain DYQ48_RS10320 PF04356 Protein of unknown function (DUF489) DYQ48_RS10330 PF00293 NUDIX domain DYQ48_RS10335 PF02617 ATP-dependent Clp protease adaptor protein ClpS DYQ48_RS10340 PF17871 AAA lid domain DYQ48_RS10340 PF00004 ATPase family associated with various cellular activities (AAA) DYQ48_RS10340 PF10431 C-terminal, D2-small domain, of ClpB protein DYQ48_RS10340 PF07724 AAA domain (Cdc48 subfamily) DYQ48_RS10340 PF02861 Clp amino terminal domain, pathogenicity island component DYQ48_RS10345 PF01176 Translation initiation factor 1A / IF-1 DYQ48_RS10350 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DYQ48_RS10360 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYQ48_RS10365 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DYQ48_RS10365 PF17854 FtsK alpha domain DYQ48_RS10365 PF09397 Ftsk gamma domain DYQ48_RS10365 PF01580 FtsK/SpoIIIE family DYQ48_RS10375 PF03548 Outer membrane lipoprotein carrier protein LolA DYQ48_RS10380 PF12002 MgsA AAA+ ATPase C terminal DYQ48_RS10380 PF16193 AAA C-terminal domain DYQ48_RS10380 PF00004 ATPase family associated with various cellular activities (AAA) DYQ48_RS10385 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DYQ48_RS10390 PF00108 Thiolase, N-terminal domain DYQ48_RS10390 PF02803 Thiolase, C-terminal domain DYQ48_RS10395 PF00378 Enoyl-CoA hydratase/isomerase DYQ48_RS10395 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DYQ48_RS10395 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DYQ48_RS10405 PF00334 Nucleoside diphosphate kinase DYQ48_RS10410 PF04055 Radical SAM superfamily DYQ48_RS10420 PF13464 Domain of unknown function (DUF4115) DYQ48_RS10430 PF13360 PQQ-like domain DYQ48_RS10430 PF01011 PQQ enzyme repeat DYQ48_RS10435 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DYQ48_RS10435 PF01926 50S ribosome-binding GTPase DYQ48_RS10440 PF03454 MoeA C-terminal region (domain IV) DYQ48_RS10440 PF00994 Probable molybdopterin binding domain DYQ48_RS10440 PF03453 MoeA N-terminal region (domain I and II) DYQ48_RS10445 PF00899 ThiF family DYQ48_RS10455 PF03372 Endonuclease/Exonuclease/phosphatase family DYQ48_RS10465 PF03453 MoeA N-terminal region (domain I and II) DYQ48_RS10465 PF03454 MoeA C-terminal region (domain IV) DYQ48_RS10465 PF00994 Probable molybdopterin binding domain DYQ48_RS10470 PF12804 MobA-like NTP transferase domain DYQ48_RS10480 PF10414 Sirohaem synthase dimerisation region DYQ48_RS10480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYQ48_RS10480 PF14824 Sirohaem biosynthesis protein central DYQ48_RS10485 PF03861 ANTAR domain DYQ48_RS10485 PF00072 Response regulator receiver domain DYQ48_RS10500 PF07690 Major Facilitator Superfamily DYQ48_RS10505 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYQ48_RS10505 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DYQ48_RS10505 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DYQ48_RS10505 PF04324 BFD-like [2Fe-2S] binding domain DYQ48_RS10505 PF18267 Rubredoxin NAD+ reductase C-terminal domain DYQ48_RS10510 PF00355 Rieske [2Fe-2S] domain DYQ48_RS10510 PF11723 Homotrimeric ring hydroxylase DYQ48_RS10515 PF00384 Molybdopterin oxidoreductase DYQ48_RS10515 PF01568 Molydopterin dinucleotide binding domain DYQ48_RS10515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DYQ48_RS10515 PF04324 BFD-like [2Fe-2S] binding domain DYQ48_RS10520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYQ48_RS10535 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DYQ48_RS10545 PF00483 Nucleotidyl transferase DYQ48_RS10555 PF01266 FAD dependent oxidoreductase DYQ48_RS10570 PF05974 Domain of unknown function (DUF892) DYQ48_RS10585 PF08447 PAS fold DYQ48_RS10585 PF08448 PAS fold DYQ48_RS10585 PF00563 EAL domain DYQ48_RS10585 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS10595 PF12951 Passenger-associated-transport-repeat DYQ48_RS10600 PF00082 Subtilase family DYQ48_RS10600 PF03797 Autotransporter beta-domain DYQ48_RS10615 PF00072 Response regulator receiver domain DYQ48_RS10615 PF00486 Transcriptional regulatory protein, C terminal DYQ48_RS10625 PF01494 FAD binding domain DYQ48_RS10655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS10655 PF13426 PAS domain DYQ48_RS10655 PF00072 Response regulator receiver domain DYQ48_RS10660 PF00672 HAMP domain DYQ48_RS10660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS10660 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS10680 PF07995 Glucose / Sorbosone dehydrogenase DYQ48_RS10690 PF01062 Bestrophin, RFP-TM, chloride channel DYQ48_RS10695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS10695 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS10700 PF00196 Bacterial regulatory proteins, luxR family DYQ48_RS10700 PF00072 Response regulator receiver domain DYQ48_RS10705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYQ48_RS10730 PF00672 HAMP domain DYQ48_RS10730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS10730 PF02203 Tar ligand binding domain homologue DYQ48_RS10740 PF03466 LysR substrate binding domain DYQ48_RS10740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS10755 PF00106 short chain dehydrogenase DYQ48_RS10785 PF02646 RmuC family DYQ48_RS10815 PF01106 NifU-like domain DYQ48_RS10820 PF01329 Pterin 4 alpha carbinolamine dehydratase DYQ48_RS10890 PF01479 S4 domain DYQ48_RS10890 PF00849 RNA pseudouridylate synthase DYQ48_RS10895 PF10150 Ribonuclease E/G family DYQ48_RS10895 PF12111 Polyribonucleotide phosphorylase C terminal DYQ48_RS10895 PF00575 S1 RNA binding domain DYQ48_RS10900 PF00072 Response regulator receiver domain DYQ48_RS10900 PF00196 Bacterial regulatory proteins, luxR family DYQ48_RS10905 PF00581 Rhodanese-like domain DYQ48_RS10905 PF17773 UPF0176 acylphosphatase like domain DYQ48_RS10915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYQ48_RS10925 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DYQ48_RS10925 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DYQ48_RS10925 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DYQ48_RS10950 PF01066 CDP-alcohol phosphatidyltransferase DYQ48_RS10955 PF01541 GIY-YIG catalytic domain DYQ48_RS10955 PF08459 UvrC Helix-hairpin-helix N-terminal DYQ48_RS10955 PF02151 UvrB/uvrC motif DYQ48_RS10965 PF01451 Low molecular weight phosphotyrosine protein phosphatase DYQ48_RS10970 PF02348 Cytidylyltransferase DYQ48_RS10975 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DYQ48_RS10980 PF00664 ABC transporter transmembrane region DYQ48_RS10980 PF00005 ABC transporter DYQ48_RS10990 PF01618 MotA/TolQ/ExbB proton channel family DYQ48_RS10995 PF00753 Metallo-beta-lactamase superfamily DYQ48_RS10995 PF03772 Competence protein DYQ48_RS11005 PF00005 ABC transporter DYQ48_RS11010 PF02687 FtsX-like permease family DYQ48_RS11010 PF12704 MacB-like periplasmic core domain DYQ48_RS11020 PF03937 Flavinator of succinate dehydrogenase DYQ48_RS11025 PF13085 2Fe-2S iron-sulfur cluster binding domain DYQ48_RS11035 PF00890 FAD binding domain DYQ48_RS11035 PF02910 Fumarate reductase flavoprotein C-term DYQ48_RS11040 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DYQ48_RS11045 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DYQ48_RS11055 PF01571 Aminomethyltransferase folate-binding domain DYQ48_RS11060 PF17912 MalK OB fold domain DYQ48_RS11060 PF00005 ABC transporter DYQ48_RS11065 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DYQ48_RS11065 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DYQ48_RS11070 PF02685 Glucokinase DYQ48_RS11075 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DYQ48_RS11080 PF00920 Dehydratase family DYQ48_RS11085 PF01081 KDPG and KHG aldolase DYQ48_RS11100 PF00873 AcrB/AcrD/AcrF family DYQ48_RS11105 PF00873 AcrB/AcrD/AcrF family DYQ48_RS11110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYQ48_RS11120 PF00034 Cytochrome c DYQ48_RS11160 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DYQ48_RS11160 PF00672 HAMP domain DYQ48_RS11160 PF00072 Response regulator receiver domain DYQ48_RS11160 PF01627 Hpt domain DYQ48_RS11160 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS11160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS11170 PF00575 S1 RNA binding domain DYQ48_RS11170 PF09371 Tex-like protein N-terminal domain DYQ48_RS11170 PF16921 Tex protein YqgF-like domain DYQ48_RS11170 PF17674 HHH domain DYQ48_RS11180 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DYQ48_RS11180 PF01266 FAD dependent oxidoreductase DYQ48_RS11195 PF00561 alpha/beta hydrolase fold DYQ48_RS11205 PF01066 CDP-alcohol phosphatidyltransferase DYQ48_RS11225 PF03618 Kinase/pyrophosphorylase DYQ48_RS11230 PF00391 PEP-utilising enzyme, mobile domain DYQ48_RS11230 PF02896 PEP-utilising enzyme, TIM barrel domain DYQ48_RS11230 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DYQ48_RS11235 PF00924 Mechanosensitive ion channel DYQ48_RS11235 PF05552 Conserved TM helix DYQ48_RS11240 PF00929 Exonuclease DYQ48_RS11245 PF14437 MafB19-like deaminase DYQ48_RS11250 PF02742 Iron dependent repressor, metal binding and dimerisation domain DYQ48_RS11250 PF01325 Iron dependent repressor, N-terminal DNA binding domain DYQ48_RS11255 PF01566 Natural resistance-associated macrophage protein DYQ48_RS11260 PF00561 alpha/beta hydrolase fold DYQ48_RS11305 PF13744 Helix-turn-helix domain DYQ48_RS11395 PF01850 PIN domain DYQ48_RS11405 PF17273 Family of unknown function (DUF5338) DYQ48_RS11490 PF13356 Arm DNA-binding domain DYQ48_RS11490 PF00589 Phage integrase family DYQ48_RS11500 PF00958 GMP synthase C terminal domain DYQ48_RS11500 PF00117 Glutamine amidotransferase class-I DYQ48_RS11500 PF02540 NAD synthase DYQ48_RS11505 PF00571 CBS domain DYQ48_RS11505 PF00478 IMP dehydrogenase / GMP reductase domain DYQ48_RS11510 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DYQ48_RS11510 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DYQ48_RS11520 PF00999 Sodium/hydrogen exchanger family DYQ48_RS11520 PF02254 TrkA-N domain DYQ48_RS11525 PF00483 Nucleotidyl transferase DYQ48_RS11530 PF02719 Polysaccharide biosynthesis protein DYQ48_RS11535 PF00953 Glycosyl transferase family 4 DYQ48_RS11540 PF18073 Rubredoxin metal binding domain DYQ48_RS11550 PF00216 Bacterial DNA-binding protein DYQ48_RS11555 PF00575 S1 RNA binding domain DYQ48_RS11560 PF02224 Cytidylate kinase DYQ48_RS11565 PF00444 Ribosomal protein L36 DYQ48_RS11575 PF04371 Porphyromonas-type peptidyl-arginine deiminase DYQ48_RS11580 PF00795 Carbon-nitrogen hydrolase DYQ48_RS11605 PF00528 Binding-protein-dependent transport system inner membrane component DYQ48_RS11610 PF00528 Binding-protein-dependent transport system inner membrane component DYQ48_RS11615 PF01547 Bacterial extracellular solute-binding protein DYQ48_RS11630 PF00356 Bacterial regulatory proteins, lacI family DYQ48_RS11640 PF03795 YCII-related domain DYQ48_RS11645 PF02616 Segregation and condensation protein ScpA DYQ48_RS11650 PF04079 Segregation and condensation complex subunit ScpB DYQ48_RS11655 PF00849 RNA pseudouridylate synthase DYQ48_RS11655 PF01479 S4 domain DYQ48_RS11675 PF00795 Carbon-nitrogen hydrolase DYQ48_RS11680 PF00155 Aminotransferase class I and II DYQ48_RS11685 PF00005 ABC transporter DYQ48_RS11690 PF03379 CcmB protein DYQ48_RS11695 PF01578 Cytochrome C assembly protein DYQ48_RS11705 PF03100 CcmE DYQ48_RS11710 PF01578 Cytochrome C assembly protein DYQ48_RS11710 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DYQ48_RS11715 PF08534 Redoxin DYQ48_RS11720 PF03918 Cytochrome C biogenesis protein DYQ48_RS11735 PF00561 alpha/beta hydrolase fold DYQ48_RS11745 PF00664 ABC transporter transmembrane region DYQ48_RS11745 PF00005 ABC transporter DYQ48_RS11750 PF00664 ABC transporter transmembrane region DYQ48_RS11750 PF00005 ABC transporter DYQ48_RS11755 PF01654 Cytochrome bd terminal oxidase subunit I DYQ48_RS11760 PF02322 Cytochrome bd terminal oxidase subunit II DYQ48_RS11780 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DYQ48_RS11780 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DYQ48_RS11790 PF00171 Aldehyde dehydrogenase family DYQ48_RS11795 PF01472 PUA domain DYQ48_RS11795 PF00696 Amino acid kinase family DYQ48_RS11810 PF00206 Lyase DYQ48_RS11815 PF01118 Semialdehyde dehydrogenase, NAD binding domain DYQ48_RS11825 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase DYQ48_RS11825 PF00696 Amino acid kinase family DYQ48_RS11830 PF07687 Peptidase dimerisation domain DYQ48_RS11830 PF01546 Peptidase family M20/M25/M40 DYQ48_RS11835 PF00764 Arginosuccinate synthase DYQ48_RS11840 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DYQ48_RS11840 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DYQ48_RS11855 PF09190 DALR domain DYQ48_RS11855 PF01406 tRNA synthetases class I (C) catalytic domain DYQ48_RS11860 PF02657 Fe-S metabolism associated domain DYQ48_RS11870 PF01258 Prokaryotic dksA/traR C4-type zinc finger DYQ48_RS11875 PF01809 Putative membrane protein insertion efficiency factor DYQ48_RS11880 PF01979 Amidohydrolase family DYQ48_RS11885 PF08460 Bacterial SH3 domain DYQ48_RS11885 PF01551 Peptidase family M23 DYQ48_RS11895 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DYQ48_RS11900 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DYQ48_RS11945 PF00295 Glycosyl hydrolases family 28 DYQ48_RS11960 PF13419 Haloacid dehalogenase-like hydrolase DYQ48_RS11970 PF01979 Amidohydrolase family DYQ48_RS11980 PF01132 Elongation factor P (EF-P) OB domain DYQ48_RS11980 PF09285 Elongation factor P, C-terminal DYQ48_RS11980 PF08207 Elongation factor P (EF-P) KOW-like domain DYQ48_RS11985 PF04055 Radical SAM superfamily DYQ48_RS11990 PF13188 PAS domain DYQ48_RS11990 PF00563 EAL domain DYQ48_RS11990 PF03707 Bacterial signalling protein N terminal repeat DYQ48_RS11990 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS12000 PF00588 SpoU rRNA Methylase family DYQ48_RS12005 PF00459 Inositol monophosphatase family DYQ48_RS12010 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DYQ48_RS12010 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DYQ48_RS12015 PF00545 ribonuclease DYQ48_RS12030 PF00308 Bacterial dnaA protein DYQ48_RS12035 PF01594 AI-2E family transporter DYQ48_RS12045 PF02769 AIR synthase related protein, C-terminal domain DYQ48_RS12045 PF00586 AIR synthase related protein, N-terminal domain DYQ48_RS12050 PF00551 Formyl transferase DYQ48_RS12075 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DYQ48_RS12080 PF01722 BolA-like protein DYQ48_RS12085 PF01380 SIS domain DYQ48_RS12085 PF00571 CBS domain DYQ48_RS12100 PF03968 OstA-like protein DYQ48_RS12105 PF00005 ABC transporter DYQ48_RS12110 PF00309 Sigma-54 factor, Activator interacting domain (AID) DYQ48_RS12110 PF04963 Sigma-54 factor, core binding domain DYQ48_RS12110 PF04552 Sigma-54, DNA binding domain DYQ48_RS12115 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DYQ48_RS12120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYQ48_RS12125 PF07475 HPr Serine kinase C-terminal domain DYQ48_RS12125 PF02603 HPr Serine kinase N terminus DYQ48_RS12130 PF03668 P-loop ATPase protein family DYQ48_RS12140 PF00381 PTS HPr component phosphorylation site DYQ48_RS12145 PF00391 PEP-utilising enzyme, mobile domain DYQ48_RS12145 PF05524 PEP-utilising enzyme, N-terminal DYQ48_RS12145 PF02896 PEP-utilising enzyme, TIM barrel domain DYQ48_RS12155 PF00571 CBS domain DYQ48_RS12155 PF03448 MgtE intracellular N domain DYQ48_RS12155 PF01769 Divalent cation transporter DYQ48_RS12160 PF00756 Putative esterase DYQ48_RS12165 PF02322 Cytochrome bd terminal oxidase subunit II DYQ48_RS12170 PF01654 Cytochrome bd terminal oxidase subunit I DYQ48_RS12180 PF00324 Amino acid permease DYQ48_RS12185 PF00544 Pectate lyase DYQ48_RS12190 PF00561 alpha/beta hydrolase fold DYQ48_RS12195 PF00196 Bacterial regulatory proteins, luxR family DYQ48_RS12200 PF00324 Amino acid permease DYQ48_RS12215 PF12706 Beta-lactamase superfamily domain DYQ48_RS12220 PF04820 Tryptophan halogenase DYQ48_RS12250 PF09278 MerR, DNA binding DYQ48_RS12250 PF00376 MerR family regulatory protein DYQ48_RS12255 PF07690 Major Facilitator Superfamily DYQ48_RS12260 PF03738 Glutathionylspermidine synthase preATP-grasp DYQ48_RS12285 PF04012 PspA/IM30 family DYQ48_RS12295 PF00583 Acetyltransferase (GNAT) family DYQ48_RS12300 PF01243 Pyridoxamine 5'-phosphate oxidase DYQ48_RS12300 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DYQ48_RS12305 PF01202 Shikimate kinase DYQ48_RS12310 PF01761 3-dehydroquinate synthase DYQ48_RS12320 PF01208 Uroporphyrinogen decarboxylase (URO-D) DYQ48_RS12325 PF00005 ABC transporter DYQ48_RS12325 PF16326 ABC transporter C-terminal domain DYQ48_RS12325 PF12848 ABC transporter DYQ48_RS12330 PF03880 DbpA RNA binding domain DYQ48_RS12330 PF00270 DEAD/DEAH box helicase DYQ48_RS12330 PF00271 Helicase conserved C-terminal domain DYQ48_RS12335 PF00156 Phosphoribosyl transferase domain DYQ48_RS12340 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DYQ48_RS12345 PF07859 alpha/beta hydrolase fold DYQ48_RS12350 PF14497 Glutathione S-transferase, C-terminal domain DYQ48_RS12350 PF02798 Glutathione S-transferase, N-terminal domain DYQ48_RS12355 PF00313 'Cold-shock' DNA-binding domain DYQ48_RS12360 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DYQ48_RS12365 PF07152 YaeQ protein DYQ48_RS12375 PF03707 Bacterial signalling protein N terminal repeat DYQ48_RS12375 PF00563 EAL domain DYQ48_RS12375 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS12385 PF01435 Peptidase family M48 DYQ48_RS12390 PF00749 tRNA synthetases class I (E and Q), catalytic domain DYQ48_RS12395 PF00106 short chain dehydrogenase DYQ48_RS12400 PF05233 PHB accumulation regulatory domain DYQ48_RS12400 PF07879 PHB/PHA accumulation regulator DNA-binding domain DYQ48_RS12415 PF08676 MutL C terminal dimerisation domain DYQ48_RS12415 PF01119 DNA mismatch repair protein, C-terminal domain DYQ48_RS12420 PF01520 N-acetylmuramoyl-L-alanine amidase DYQ48_RS12420 PF11741 AMIN domain DYQ48_RS12430 PF03853 YjeF-related protein N-terminus DYQ48_RS12430 PF01256 Carbohydrate kinase DYQ48_RS12435 PF08331 Domain of unknown function (DUF1730) DYQ48_RS12440 PF02601 Exonuclease VII, large subunit DYQ48_RS12440 PF13742 OB-fold nucleic acid binding domain DYQ48_RS12450 PF03781 Sulfatase-modifying factor enzyme 1 DYQ48_RS12460 PF00570 HRDC domain DYQ48_RS12460 PF01612 3'-5' exonuclease DYQ48_RS12480 PF01584 CheW-like domain DYQ48_RS12485 PF00672 HAMP domain DYQ48_RS12485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYQ48_RS12485 PF02743 Cache domain DYQ48_RS12495 PF08494 DEAD/H associated DYQ48_RS12495 PF00270 DEAD/DEAH box helicase DYQ48_RS12495 PF00271 Helicase conserved C-terminal domain DYQ48_RS12505 PF04386 Stringent starvation protein B DYQ48_RS12510 PF00043 Glutathione S-transferase, C-terminal domain DYQ48_RS12510 PF02798 Glutathione S-transferase, N-terminal domain DYQ48_RS12520 PF02167 Cytochrome C1 family DYQ48_RS12525 PF00033 Cytochrome b/b6/petB DYQ48_RS12525 PF00032 Cytochrome b(C-terminal)/b6/petD DYQ48_RS12530 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DYQ48_RS12530 PF00355 Rieske [2Fe-2S] domain DYQ48_RS12535 PF01464 Transglycosylase SLT domain DYQ48_RS12550 PF01938 TRAM domain DYQ48_RS12550 PF00919 Uncharacterized protein family UPF0004 DYQ48_RS12550 PF04055 Radical SAM superfamily DYQ48_RS12555 PF02562 PhoH-like protein DYQ48_RS12565 PF02130 Uncharacterized protein family UPF0054 DYQ48_RS12575 PF00571 CBS domain DYQ48_RS12575 PF03471 Transporter associated domain DYQ48_RS12595 PF00171 Aldehyde dehydrogenase family DYQ48_RS12605 PF00528 Binding-protein-dependent transport system inner membrane component DYQ48_RS12610 PF00528 Binding-protein-dependent transport system inner membrane component DYQ48_RS12620 PF00005 ABC transporter DYQ48_RS12620 PF08402 TOBE domain DYQ48_RS12625 PF02321 Outer membrane efflux protein DYQ48_RS12630 PF07690 Major Facilitator Superfamily DYQ48_RS12635 PF13533 Biotin-lipoyl like DYQ48_RS12640 PF13416 Bacterial extracellular solute-binding protein DYQ48_RS12645 PF00202 Aminotransferase class-III DYQ48_RS12650 PF00120 Glutamine synthetase, catalytic domain DYQ48_RS12655 PF07722 Peptidase C26 DYQ48_RS12660 PF00120 Glutamine synthetase, catalytic domain DYQ48_RS12665 PF01266 FAD dependent oxidoreductase DYQ48_RS12675 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS12675 PF00072 Response regulator receiver domain DYQ48_RS12695 PF00384 Molybdopterin oxidoreductase DYQ48_RS12700 PF02634 FdhD/NarQ family DYQ48_RS12705 PF07690 Major Facilitator Superfamily DYQ48_RS12710 PF00202 Aminotransferase class-III DYQ48_RS12720 PF04286 Protein of unknown function (DUF445) DYQ48_RS12725 PF00672 HAMP domain DYQ48_RS12725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS12725 PF01627 Hpt domain DYQ48_RS12725 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS12725 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DYQ48_RS12725 PF00072 Response regulator receiver domain DYQ48_RS12730 PF00072 Response regulator receiver domain DYQ48_RS12735 PF07690 Major Facilitator Superfamily DYQ48_RS12745 PF08240 Alcohol dehydrogenase GroES-like domain DYQ48_RS12745 PF00107 Zinc-binding dehydrogenase DYQ48_RS12750 PF00106 short chain dehydrogenase DYQ48_RS12755 PF00440 Bacterial regulatory proteins, tetR family DYQ48_RS12760 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DYQ48_RS12765 PF00106 short chain dehydrogenase DYQ48_RS12770 PF14765 Polyketide synthase dehydratase DYQ48_RS12770 PF08659 KR domain DYQ48_RS12770 PF00550 Phosphopantetheine attachment site DYQ48_RS12770 PF00698 Acyl transferase domain DYQ48_RS12770 PF02801 Beta-ketoacyl synthase, C-terminal domain DYQ48_RS12770 PF16197 Ketoacyl-synthetase C-terminal extension DYQ48_RS12770 PF00109 Beta-ketoacyl synthase, N-terminal domain DYQ48_RS12770 PF08240 Alcohol dehydrogenase GroES-like domain DYQ48_RS12805 PF05088 Bacterial NAD-glutamate dehydrogenase DYQ48_RS12815 PF00529 HlyD membrane-fusion protein of T1SS DYQ48_RS12815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYQ48_RS12820 PF00873 AcrB/AcrD/AcrF family DYQ48_RS12825 PF00356 Bacterial regulatory proteins, lacI family DYQ48_RS12830 PF00381 PTS HPr component phosphorylation site DYQ48_RS12830 PF02896 PEP-utilising enzyme, TIM barrel domain DYQ48_RS12830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYQ48_RS12830 PF00391 PEP-utilising enzyme, mobile domain DYQ48_RS12830 PF05524 PEP-utilising enzyme, N-terminal DYQ48_RS12835 PF00294 pfkB family carbohydrate kinase DYQ48_RS12840 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DYQ48_RS12905 PF07549 SecD/SecF GG Motif DYQ48_RS12905 PF02355 Protein export membrane protein DYQ48_RS12910 PF13721 SecD export protein N-terminal TM region DYQ48_RS12910 PF07549 SecD/SecF GG Motif DYQ48_RS12910 PF02355 Protein export membrane protein DYQ48_RS12915 PF02699 Preprotein translocase subunit DYQ48_RS12920 PF01702 Queuine tRNA-ribosyltransferase DYQ48_RS12925 PF02547 Queuosine biosynthesis protein DYQ48_RS12970 PF02927 Cellulase N-terminal ig-like domain DYQ48_RS12970 PF00759 Glycosyl hydrolase family 9 DYQ48_RS12985 PF00037 4Fe-4S binding domain DYQ48_RS13000 PF01467 Cytidylyltransferase-like DYQ48_RS13010 PF00183 Hsp90 protein DYQ48_RS13010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS13055 PF00593 TonB dependent receptor DYQ48_RS13055 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS13070 PF07532 Bacterial Ig-like domain (group 4) DYQ48_RS13075 PF07532 Bacterial Ig-like domain (group 4) DYQ48_RS13090 PF00082 Subtilase family DYQ48_RS13090 PF09286 Pro-kumamolisin, activation domain DYQ48_RS13120 PF13520 Amino acid permease DYQ48_RS13135 PF00557 Metallopeptidase family M24 DYQ48_RS13135 PF01321 Creatinase/Prolidase N-terminal domain DYQ48_RS13140 PF00171 Aldehyde dehydrogenase family DYQ48_RS13145 PF00701 Dihydrodipicolinate synthetase family DYQ48_RS13150 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYQ48_RS13150 PF04324 BFD-like [2Fe-2S] binding domain DYQ48_RS13160 PF01266 FAD dependent oxidoreductase DYQ48_RS13165 PF05544 Proline racemase DYQ48_RS13175 PF02881 SRP54-type protein, helical bundle domain DYQ48_RS13175 PF00448 SRP54-type protein, GTPase domain DYQ48_RS13180 PF14815 NUDIX domain DYQ48_RS13180 PF00633 Helix-hairpin-helix motif DYQ48_RS13180 PF00730 HhH-GPD superfamily base excision DNA repair protein DYQ48_RS13180 PF10576 Iron-sulfur binding domain of endonuclease III DYQ48_RS13185 PF04362 Bacterial Fe(2+) trafficking DYQ48_RS13205 PF00893 Small Multidrug Resistance protein DYQ48_RS13230 PF08212 Lipocalin-like domain DYQ48_RS13240 PF02770 Acyl-CoA dehydrogenase, middle domain DYQ48_RS13240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYQ48_RS13240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYQ48_RS13240 PF12806 Acetyl-CoA dehydrogenase C-terminal like DYQ48_RS13250 PF02780 Transketolase, C-terminal domain DYQ48_RS13250 PF02779 Transketolase, pyrimidine binding domain DYQ48_RS13250 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DYQ48_RS13270 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DYQ48_RS13275 PF00753 Metallo-beta-lactamase superfamily DYQ48_RS13275 PF16123 Hydroxyacylglutathione hydrolase C-terminus DYQ48_RS13280 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DYQ48_RS13280 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DYQ48_RS13295 PF03808 Glycosyl transferase WecB/TagA/CpsF family DYQ48_RS13310 PF14667 Polysaccharide biosynthesis C-terminal domain DYQ48_RS13320 PF13439 Glycosyltransferase Family 4 DYQ48_RS13320 PF00534 Glycosyl transferases group 1 DYQ48_RS13340 PF02397 Bacterial sugar transferase DYQ48_RS13360 PF13411 MerR HTH family regulatory protein DYQ48_RS13365 PF00216 Bacterial DNA-binding protein DYQ48_RS13370 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DYQ48_RS13370 PF03483 B3/4 domain DYQ48_RS13370 PF03484 tRNA synthetase B5 domain DYQ48_RS13370 PF01588 Putative tRNA binding domain DYQ48_RS13370 PF03147 Ferredoxin-fold anticodon binding domain DYQ48_RS13375 PF01409 tRNA synthetases class II core domain (F) DYQ48_RS13375 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DYQ48_RS13380 PF00453 Ribosomal protein L20 DYQ48_RS13385 PF01632 Ribosomal protein L35 DYQ48_RS13390 PF05198 Translation initiation factor IF-3, N-terminal domain DYQ48_RS13390 PF00707 Translation initiation factor IF-3, C-terminal domain DYQ48_RS13395 PF02824 TGS domain DYQ48_RS13395 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DYQ48_RS13395 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYQ48_RS13395 PF03129 Anticodon binding domain DYQ48_RS13455 PF03135 CagE, TrbE, VirB family, component of type IV transporter system DYQ48_RS13460 PF05101 Type IV secretory pathway, VirB3-like protein DYQ48_RS13470 PF01464 Transglycosylase SLT domain DYQ48_RS13475 PF00437 Type II/IV secretion system protein DYQ48_RS13480 PF03743 Bacterial conjugation TrbI-like protein DYQ48_RS13500 PF02534 Type IV secretory system Conjugative DNA transfer DYQ48_RS13515 PF00271 Helicase conserved C-terminal domain DYQ48_RS13515 PF02151 UvrB/uvrC motif DYQ48_RS13515 PF12344 Ultra-violet resistance protein B DYQ48_RS13515 PF04851 Type III restriction enzyme, res subunit DYQ48_RS13515 PF17757 UvrB interaction domain DYQ48_RS13520 PF07963 Prokaryotic N-terminal methylation motif DYQ48_RS13520 PF00114 Pilin (bacterial filament) DYQ48_RS13535 PF05567 Neisseria PilC beta-propeller domain DYQ48_RS13555 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor DYQ48_RS13555 PF07963 Prokaryotic N-terminal methylation motif DYQ48_RS13560 PF11892 Domain of unknown function (DUF3412) DYQ48_RS13560 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases DYQ48_RS13560 PF03641 Possible lysine decarboxylase DYQ48_RS13565 PF00593 TonB dependent receptor DYQ48_RS13565 PF00593 TonB dependent receptor DYQ48_RS13570 PF01914 MarC family integral membrane protein DYQ48_RS13580 PF00462 Glutaredoxin DYQ48_RS13585 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DYQ48_RS13585 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DYQ48_RS13590 PF02222 ATP-grasp domain DYQ48_RS13590 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DYQ48_RS13595 PF00731 AIR carboxylase DYQ48_RS13605 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DYQ48_RS13605 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DYQ48_RS13620 PF00013 KH domain DYQ48_RS13620 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DYQ48_RS13620 PF01138 3' exoribonuclease family, domain 1 DYQ48_RS13620 PF03725 3' exoribonuclease family, domain 2 DYQ48_RS13620 PF00575 S1 RNA binding domain DYQ48_RS13625 PF00312 Ribosomal protein S15 DYQ48_RS13630 PF09157 Pseudouridine synthase II TruB, C-terminal DYQ48_RS13630 PF16198 tRNA pseudouridylate synthase B C-terminal domain DYQ48_RS13630 PF01509 TruB family pseudouridylate synthase (N terminal domain) DYQ48_RS13635 PF02033 Ribosome-binding factor A DYQ48_RS13640 PF04760 Translation initiation factor IF-2, N-terminal region DYQ48_RS13640 PF11987 Translation-initiation factor 2 DYQ48_RS13640 PF00009 Elongation factor Tu GTP binding domain DYQ48_RS13640 PF08364 Bacterial translation initiation factor IF-2 associated region DYQ48_RS13645 PF00575 S1 RNA binding domain DYQ48_RS13645 PF13184 NusA-like KH domain DYQ48_RS13645 PF08529 NusA N-terminal domain DYQ48_RS13650 PF17384 RimP C-terminal SH3 domain DYQ48_RS13650 PF02576 RimP N-terminal domain DYQ48_RS13660 PF00361 Proton-conducting membrane transporter DYQ48_RS13665 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DYQ48_RS13665 PF00361 Proton-conducting membrane transporter DYQ48_RS13670 PF00361 Proton-conducting membrane transporter DYQ48_RS13670 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DYQ48_RS13675 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DYQ48_RS13680 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DYQ48_RS13685 PF12838 4Fe-4S dicluster domain DYQ48_RS13690 PF00146 NADH dehydrogenase DYQ48_RS13695 PF00384 Molybdopterin oxidoreductase DYQ48_RS13695 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DYQ48_RS13695 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DYQ48_RS13700 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DYQ48_RS13700 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DYQ48_RS13700 PF10531 SLBB domain DYQ48_RS13710 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DYQ48_RS13715 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DYQ48_RS13720 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DYQ48_RS13725 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DYQ48_RS13740 PF00121 Triosephosphate isomerase DYQ48_RS13745 PF00106 short chain dehydrogenase DYQ48_RS13770 PF00563 EAL domain DYQ48_RS13770 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS13770 PF03707 Bacterial signalling protein N terminal repeat DYQ48_RS13785 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DYQ48_RS13785 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DYQ48_RS13785 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DYQ48_RS13785 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DYQ48_RS13790 PF01039 Carboxyl transferase domain DYQ48_RS13790 PF17848 Acetyl-coA carboxylase zinc finger domain DYQ48_RS13795 PF00290 Tryptophan synthase alpha chain DYQ48_RS13805 PF00291 Pyridoxal-phosphate dependent enzyme DYQ48_RS13810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS13810 PF03466 LysR substrate binding domain DYQ48_RS13815 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DYQ48_RS13820 PF01416 tRNA pseudouridine synthase DYQ48_RS13835 PF02774 Semialdehyde dehydrogenase, dimerisation domain DYQ48_RS13835 PF01118 Semialdehyde dehydrogenase, NAD binding domain DYQ48_RS13840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYQ48_RS13840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYQ48_RS13845 PF01264 Chorismate synthase DYQ48_RS13855 PF05175 Methyltransferase small domain DYQ48_RS13860 PF02630 SCO1/SenC DYQ48_RS13865 PF02666 Phosphatidylserine decarboxylase DYQ48_RS13875 PF05872 Bacterial protein of unknown function (DUF853) DYQ48_RS13910 PF12802 MarR family DYQ48_RS13925 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYQ48_RS13925 PF14310 Fibronectin type III-like domain DYQ48_RS13925 PF00933 Glycosyl hydrolase family 3 N terminal domain DYQ48_RS13945 PF03449 Transcription elongation factor, N-terminal DYQ48_RS13945 PF01272 Transcription elongation factor, GreA/GreB, C-term DYQ48_RS13950 PF04055 Radical SAM superfamily DYQ48_RS13950 PF18693 TRAM domain DYQ48_RS13950 PF00919 Uncharacterized protein family UPF0004 DYQ48_RS13955 PF01738 Dienelactone hydrolase family DYQ48_RS13975 PF00692 dUTPase DYQ48_RS13985 PF10609 NUBPL iron-transfer P-loop NTPase DYQ48_RS13990 PF00593 TonB dependent receptor DYQ48_RS13990 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS14010 PF05649 Peptidase family M13 DYQ48_RS14010 PF01431 Peptidase family M13 DYQ48_RS14035 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYQ48_RS14035 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYQ48_RS14040 PF04235 Protein of unknown function (DUF418) DYQ48_RS14045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYQ48_RS14050 PF00877 NlpC/P60 family DYQ48_RS14055 PF00877 NlpC/P60 family DYQ48_RS14065 PF13649 Methyltransferase domain DYQ48_RS14070 PF00375 Sodium:dicarboxylate symporter family DYQ48_RS14075 PF00245 Alkaline phosphatase DYQ48_RS14080 PF09179 TilS substrate binding domain DYQ48_RS14080 PF11734 TilS substrate C-terminal domain DYQ48_RS14080 PF01171 PP-loop family DYQ48_RS14085 PF02609 Exonuclease VII small subunit DYQ48_RS14090 PF00348 Polyprenyl synthetase DYQ48_RS14095 PF14521 Lysine-specific metallo-endopeptidase DYQ48_RS14105 PF01523 Putative modulator of DNA gyrase DYQ48_RS14110 PF04751 Protein of unknown function (DUF615) DYQ48_RS14115 PF01523 Putative modulator of DNA gyrase DYQ48_RS14125 PF13116 Protein of unknown function DYQ48_RS14125 PF13502 AsmA-like C-terminal region DYQ48_RS14130 PF10150 Ribonuclease E/G family DYQ48_RS14130 PF00575 S1 RNA binding domain DYQ48_RS14135 PF02545 Maf-like protein DYQ48_RS14150 PF02590 Predicted SPOUT methyltransferase DYQ48_RS14170 PF01467 Cytidylyltransferase-like DYQ48_RS14185 PF08264 Anticodon-binding domain of tRNA DYQ48_RS14185 PF13603 Leucyl-tRNA synthetase, Domain 2 DYQ48_RS14185 PF00133 tRNA synthetases class I (I, L, M and V) DYQ48_RS14195 PF00085 Thioredoxin DYQ48_RS14205 PF00691 OmpA family DYQ48_RS14205 PF05736 OprF membrane domain DYQ48_RS14210 PF03441 FAD binding domain of DNA photolyase DYQ48_RS14210 PF00875 DNA photolyase DYQ48_RS14220 PF03796 DnaB-like helicase C terminal domain DYQ48_RS14220 PF00772 DnaB-like helicase N terminal domain DYQ48_RS14225 PF03358 NADPH-dependent FMN reductase DYQ48_RS14230 PF13537 Glutamine amidotransferase domain DYQ48_RS14230 PF00733 Asparagine synthase DYQ48_RS14235 PF02798 Glutathione S-transferase, N-terminal domain DYQ48_RS14235 PF00043 Glutathione S-transferase, C-terminal domain DYQ48_RS14245 PF02770 Acyl-CoA dehydrogenase, middle domain DYQ48_RS14245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYQ48_RS14245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYQ48_RS14260 PF01026 TatD related DNase DYQ48_RS14265 PF00899 ThiF family DYQ48_RS14280 PF00313 'Cold-shock' DNA-binding domain DYQ48_RS14290 PF02253 Phospholipase A1 DYQ48_RS14300 PF00484 Carbonic anhydrase DYQ48_RS14315 PF05681 Fumarate hydratase (Fumerase) DYQ48_RS14315 PF05683 Fumarase C-terminus DYQ48_RS14320 PF00005 ABC transporter DYQ48_RS14325 PF00970 Oxidoreductase FAD-binding domain DYQ48_RS14325 PF00175 Oxidoreductase NAD-binding domain DYQ48_RS14330 PF00255 Glutathione peroxidase DYQ48_RS14335 PF01432 Peptidase family M3 DYQ48_RS14340 PF12802 MarR family DYQ48_RS14365 PF00854 POT family DYQ48_RS14375 PF00933 Glycosyl hydrolase family 3 N terminal domain DYQ48_RS14375 PF14310 Fibronectin type III-like domain DYQ48_RS14375 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYQ48_RS14390 PF07690 Major Facilitator Superfamily DYQ48_RS14395 PF00529 HlyD membrane-fusion protein of T1SS DYQ48_RS14395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYQ48_RS14400 PF02321 Outer membrane efflux protein DYQ48_RS14415 PF03989 DNA gyrase C-terminal domain, beta-propeller DYQ48_RS14415 PF00521 DNA gyrase/topoisomerase IV, subunit A DYQ48_RS14430 PF05724 Thiopurine S-methyltransferase (TPMT) DYQ48_RS14435 PF00210 Ferritin-like domain DYQ48_RS14440 PF01804 Penicillin amidase DYQ48_RS14445 PF00593 TonB dependent receptor DYQ48_RS14445 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS14455 PF00733 Asparagine synthase DYQ48_RS14455 PF13537 Glutamine amidotransferase domain DYQ48_RS14460 PF01546 Peptidase family M20/M25/M40 DYQ48_RS14460 PF07687 Peptidase dimerisation domain DYQ48_RS14465 PF03960 ArsC family DYQ48_RS14475 PF00132 Bacterial transferase hexapeptide (six repeats) DYQ48_RS14475 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DYQ48_RS14475 PF14602 Hexapeptide repeat of succinyl-transferase DYQ48_RS14480 PF08335 GlnD PII-uridylyltransferase DYQ48_RS14480 PF01909 Nucleotidyltransferase domain DYQ48_RS14480 PF01966 HD domain DYQ48_RS14485 PF00557 Metallopeptidase family M24 DYQ48_RS14525 PF00318 Ribosomal protein S2 DYQ48_RS14530 PF00889 Elongation factor TS DYQ48_RS14535 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS14535 PF00072 Response regulator receiver domain DYQ48_RS14540 PF00696 Amino acid kinase family DYQ48_RS14545 PF01765 Ribosome recycling factor DYQ48_RS14550 PF01255 Putative undecaprenyl diphosphate synthase DYQ48_RS14560 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DYQ48_RS14560 PF13288 DXP reductoisomerase C-terminal domain DYQ48_RS14560 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DYQ48_RS14565 PF02163 Peptidase family M50 DYQ48_RS14565 PF17820 PDZ domain DYQ48_RS14570 PF01103 Surface antigen DYQ48_RS14570 PF07244 Surface antigen variable number repeat DYQ48_RS14580 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DYQ48_RS14580 PF00132 Bacterial transferase hexapeptide (six repeats) DYQ48_RS14585 PF07977 FabA-like domain DYQ48_RS14590 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DYQ48_RS14590 PF00132 Bacterial transferase hexapeptide (six repeats) DYQ48_RS14595 PF02684 Lipid-A-disaccharide synthetase DYQ48_RS14600 PF01351 Ribonuclease HII DYQ48_RS14605 PF01336 OB-fold nucleic acid binding domain DYQ48_RS14605 PF07733 Bacterial DNA polymerase III alpha NTPase domain DYQ48_RS14605 PF02811 PHP domain DYQ48_RS14605 PF14579 Helix-hairpin-helix motif DYQ48_RS14605 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DYQ48_RS14610 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DYQ48_RS14620 PF03653 Uncharacterised protein family (UPF0093) DYQ48_RS14650 PF03551 Transcriptional regulator PadR-like family DYQ48_RS14675 PF02592 Putative vitamin uptake transporter DYQ48_RS14680 PF01810 LysE type translocator DYQ48_RS14695 PF02574 Homocysteine S-methyltransferase DYQ48_RS14700 PF00324 Amino acid permease DYQ48_RS14705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DYQ48_RS14710 PF00005 ABC transporter DYQ48_RS14710 PF13732 Domain of unknown function (DUF4162) DYQ48_RS14725 PF09334 tRNA synthetases class I (M) DYQ48_RS14725 PF01588 Putative tRNA binding domain DYQ48_RS14735 PF04060 Putative Fe-S cluster DYQ48_RS14750 PF04542 Sigma-70 region 2 DYQ48_RS14750 PF04545 Sigma-70, region 4 DYQ48_RS14795 PF01042 Endoribonuclease L-PSP DYQ48_RS14805 PF09924 Uncharacterised conserved protein (DUF2156) DYQ48_RS14805 PF03706 Lysylphosphatidylglycerol synthase TM region DYQ48_RS14840 PF07690 Major Facilitator Superfamily DYQ48_RS14845 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DYQ48_RS14860 PF03831 PhnA domain DYQ48_RS14860 PF08274 PhnA Zinc-Ribbon DYQ48_RS14870 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYQ48_RS14895 PF08281 Sigma-70, region 4 DYQ48_RS14895 PF04542 Sigma-70 region 2 DYQ48_RS14910 PF01258 Prokaryotic dksA/traR C4-type zinc finger DYQ48_RS14920 PF07043 Protein of unknown function (DUF1328) DYQ48_RS14925 PF01863 Protein of unknown function DUF45 DYQ48_RS14935 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DYQ48_RS14935 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DYQ48_RS14940 PF00082 Subtilase family DYQ48_RS14940 PF12951 Passenger-associated-transport-repeat DYQ48_RS14940 PF03797 Autotransporter beta-domain DYQ48_RS14945 PF00108 Thiolase, N-terminal domain DYQ48_RS14945 PF02803 Thiolase, C-terminal domain DYQ48_RS14960 PF00072 Response regulator receiver domain DYQ48_RS14960 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS14975 PF01068 ATP dependent DNA ligase domain DYQ48_RS14975 PF04679 ATP dependent DNA ligase C terminal region DYQ48_RS14975 PF04675 DNA ligase N terminus DYQ48_RS14985 PF04679 ATP dependent DNA ligase C terminal region DYQ48_RS14985 PF04675 DNA ligase N terminus DYQ48_RS14985 PF01068 ATP dependent DNA ligase domain DYQ48_RS14990 PF00270 DEAD/DEAH box helicase DYQ48_RS14990 PF08494 DEAD/H associated DYQ48_RS14990 PF00271 Helicase conserved C-terminal domain DYQ48_RS15005 PF00313 'Cold-shock' DNA-binding domain DYQ48_RS15010 PF01048 Phosphorylase superfamily DYQ48_RS15015 PF00156 Phosphoribosyl transferase domain DYQ48_RS15020 PF00933 Glycosyl hydrolase family 3 N terminal domain DYQ48_RS15025 PF04244 Deoxyribodipyrimidine photo-lyase-related protein DYQ48_RS15030 PF01593 Flavin containing amine oxidoreductase DYQ48_RS15035 PF01323 DSBA-like thioredoxin domain DYQ48_RS15040 PF01928 CYTH domain DYQ48_RS15055 PF05958 tRNA (Uracil-5-)-methyltransferase DYQ48_RS15060 PF00486 Transcriptional regulatory protein, C terminal DYQ48_RS15060 PF00072 Response regulator receiver domain DYQ48_RS15065 PF02565 Recombination protein O C terminal DYQ48_RS15065 PF11967 Recombination protein O N terminal DYQ48_RS15070 PF07650 KH domain DYQ48_RS15070 PF01926 50S ribosome-binding GTPase DYQ48_RS15075 PF14622 Ribonuclease-III-like DYQ48_RS15075 PF00035 Double-stranded RNA binding motif DYQ48_RS15085 PF10502 Signal peptidase, peptidase S26 DYQ48_RS15090 PF00679 Elongation factor G C-terminus DYQ48_RS15090 PF00009 Elongation factor Tu GTP binding domain DYQ48_RS15090 PF03144 Elongation factor Tu domain 2 DYQ48_RS15090 PF06421 GTP-binding protein LepA C-terminus DYQ48_RS15095 PF13180 PDZ domain DYQ48_RS15105 PF04542 Sigma-70 region 2 DYQ48_RS15105 PF08281 Sigma-70, region 4 DYQ48_RS15110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DYQ48_RS15110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DYQ48_RS15110 PF00378 Enoyl-CoA hydratase/isomerase DYQ48_RS15115 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS15115 PF00593 TonB dependent receptor DYQ48_RS15120 PF13181 Tetratricopeptide repeat DYQ48_RS15140 PF01545 Cation efflux family DYQ48_RS15150 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DYQ48_RS15150 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DYQ48_RS15155 PF00378 Enoyl-CoA hydratase/isomerase DYQ48_RS15155 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DYQ48_RS15155 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DYQ48_RS15160 PF00378 Enoyl-CoA hydratase/isomerase DYQ48_RS15165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYQ48_RS15165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYQ48_RS15165 PF02770 Acyl-CoA dehydrogenase, middle domain DYQ48_RS15170 PF00171 Aldehyde dehydrogenase family DYQ48_RS15175 PF06114 IrrE N-terminal-like domain DYQ48_RS15175 PF09856 Predicted transcriptional regulator (DUF2083) DYQ48_RS15175 PF01381 Helix-turn-helix DYQ48_RS15185 PF07745 Glycosyl hydrolase family 53 DYQ48_RS15190 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYQ48_RS15190 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYQ48_RS15190 PF00703 Glycosyl hydrolases family 2 DYQ48_RS15190 PF16355 Domain of unknown function (DUF4982) DYQ48_RS15190 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DYQ48_RS15195 PF13378 Enolase C-terminal domain-like DYQ48_RS15200 PF00375 Sodium:dicarboxylate symporter family DYQ48_RS15205 PF03466 LysR substrate binding domain DYQ48_RS15205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS15215 PF00106 short chain dehydrogenase DYQ48_RS15225 PF00296 Luciferase-like monooxygenase DYQ48_RS15230 PF17754 MftR C-terminal domain DYQ48_RS15230 PF00440 Bacterial regulatory proteins, tetR family DYQ48_RS15260 PF05192 MutS domain III DYQ48_RS15260 PF01624 MutS domain I DYQ48_RS15260 PF05188 MutS domain II DYQ48_RS15260 PF05190 MutS family domain IV DYQ48_RS15260 PF00488 MutS domain V DYQ48_RS15270 PF00141 Peroxidase DYQ48_RS15280 PF01479 S4 domain DYQ48_RS15285 PF01554 MatE DYQ48_RS15290 PF01245 Ribosomal protein L19 DYQ48_RS15295 PF01746 tRNA (Guanine-1)-methyltransferase DYQ48_RS15300 PF05239 PRC-barrel domain DYQ48_RS15300 PF01782 RimM N-terminal domain DYQ48_RS15305 PF00886 Ribosomal protein S16 DYQ48_RS15315 PF03060 Nitronate monooxygenase DYQ48_RS15320 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) DYQ48_RS15325 PF00448 SRP54-type protein, GTPase domain DYQ48_RS15325 PF02978 Signal peptide binding domain DYQ48_RS15325 PF02881 SRP54-type protein, helical bundle domain DYQ48_RS15330 PF01578 Cytochrome C assembly protein DYQ48_RS15335 PF01263 Aldose 1-epimerase DYQ48_RS15375 PF06964 Alpha-L-arabinofuranosidase C-terminal domain DYQ48_RS15380 PF03466 LysR substrate binding domain DYQ48_RS15380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS15395 PF00072 Response regulator receiver domain DYQ48_RS15400 PF13426 PAS domain DYQ48_RS15400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS15400 PF00072 Response regulator receiver domain DYQ48_RS15405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS15405 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS15405 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DYQ48_RS15405 PF00672 HAMP domain DYQ48_RS15405 PF01627 Hpt domain DYQ48_RS15405 PF00072 Response regulator receiver domain DYQ48_RS15410 PF03705 CheR methyltransferase, all-alpha domain DYQ48_RS15410 PF01739 CheR methyltransferase, SAM binding domain DYQ48_RS15415 PF01339 CheB methylesterase DYQ48_RS15415 PF00072 Response regulator receiver domain DYQ48_RS15420 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS15420 PF13493 Domain of unknown function (DUF4118) DYQ48_RS15420 PF02702 Osmosensitive K+ channel His kinase sensor domain DYQ48_RS15420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS15420 PF13492 GAF domain DYQ48_RS15425 PF07237 Protein of unknown function (DUF1428) DYQ48_RS15430 PF00085 Thioredoxin DYQ48_RS15435 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS15435 PF00593 TonB dependent receptor DYQ48_RS15445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS15445 PF00072 Response regulator receiver domain DYQ48_RS15445 PF13188 PAS domain DYQ48_RS15445 PF08448 PAS fold DYQ48_RS15445 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS15450 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS15450 PF00672 HAMP domain DYQ48_RS15450 PF17149 Periplasmic sensor domain found in signal transduction proteins DYQ48_RS15450 PF00072 Response regulator receiver domain DYQ48_RS15450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS15450 PF01627 Hpt domain DYQ48_RS15460 PF13581 Histidine kinase-like ATPase domain DYQ48_RS15465 PF01740 STAS domain DYQ48_RS15470 PF08678 Rsbr N terminal DYQ48_RS15470 PF01740 STAS domain DYQ48_RS15475 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DYQ48_RS15490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS15490 PF00183 Hsp90 protein DYQ48_RS15495 PF12833 Helix-turn-helix domain DYQ48_RS15505 PF05656 Protein of unknown function (DUF805) DYQ48_RS15510 PF18073 Rubredoxin metal binding domain DYQ48_RS15520 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DYQ48_RS15525 PF00510 Cytochrome c oxidase subunit III DYQ48_RS15530 PF00115 Cytochrome C and Quinol oxidase polypeptide I DYQ48_RS15535 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DYQ48_RS15535 PF06481 COX Aromatic Rich Motif DYQ48_RS15545 PF02401 LytB protein DYQ48_RS15550 PF01252 Signal peptidase (SPase) II DYQ48_RS15555 PF00133 tRNA synthetases class I (I, L, M and V) DYQ48_RS15555 PF08264 Anticodon-binding domain of tRNA DYQ48_RS15555 PF06827 Zinc finger found in FPG and IleRS DYQ48_RS15560 PF01687 Riboflavin kinase DYQ48_RS15560 PF06574 FAD synthetase DYQ48_RS15565 PF03023 Lipid II flippase MurJ DYQ48_RS15570 PF01649 Ribosomal protein S20 DYQ48_RS15575 PF01018 GTP1/OBG DYQ48_RS15575 PF01926 50S ribosome-binding GTPase DYQ48_RS15580 PF01016 Ribosomal L27 protein DYQ48_RS15585 PF00829 Ribosomal prokaryotic L21 protein DYQ48_RS15590 PF17760 UvrA interaction domain DYQ48_RS15590 PF00005 ABC transporter DYQ48_RS15590 PF17755 UvrA DNA-binding domain DYQ48_RS15605 PF00378 Enoyl-CoA hydratase/isomerase DYQ48_RS15620 PF08281 Sigma-70, region 4 DYQ48_RS15620 PF04542 Sigma-70 region 2 DYQ48_RS15640 PF04377 Arginine-tRNA-protein transferase, C terminus DYQ48_RS15640 PF04376 Arginine-tRNA-protein transferase, N terminus DYQ48_RS15660 PF01370 NAD dependent epimerase/dehydratase family DYQ48_RS15660 PF02222 ATP-grasp domain DYQ48_RS15690 PF00730 HhH-GPD superfamily base excision DNA repair protein DYQ48_RS15705 PF00196 Bacterial regulatory proteins, luxR family DYQ48_RS15705 PF00072 Response regulator receiver domain DYQ48_RS15710 PF07730 Histidine kinase DYQ48_RS15725 PF03775 Septum formation inhibitor MinC, C-terminal domain DYQ48_RS15725 PF05209 Septum formation inhibitor MinC, N-terminal domain DYQ48_RS15730 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DYQ48_RS15735 PF03776 Septum formation topological specificity factor MinE DYQ48_RS15745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS15745 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS15750 PF00072 Response regulator receiver domain DYQ48_RS15750 PF00486 Transcriptional regulatory protein, C terminal DYQ48_RS15765 PF00884 Sulfatase DYQ48_RS15765 PF08019 Phosphoethanolamine transferase EptA/EptB DYQ48_RS15790 PF07690 Major Facilitator Superfamily DYQ48_RS15795 PF02347 Glycine cleavage system P-protein DYQ48_RS15800 PF00135 Carboxylesterase family DYQ48_RS15805 PF00248 Aldo/keto reductase family DYQ48_RS15815 PF00199 Catalase DYQ48_RS15815 PF06628 Catalase-related immune-responsive DYQ48_RS15815 PF18011 C-terminal domain found in long catalases DYQ48_RS15825 PF12833 Helix-turn-helix domain DYQ48_RS15825 PF02311 AraC-like ligand binding domain DYQ48_RS15835 PF07676 WD40-like Beta Propeller Repeat DYQ48_RS15835 PF00326 Prolyl oligopeptidase family DYQ48_RS15835 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DYQ48_RS15845 PF03169 OPT oligopeptide transporter protein DYQ48_RS15855 PF02811 PHP domain DYQ48_RS15855 PF14579 Helix-hairpin-helix motif DYQ48_RS15855 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DYQ48_RS15855 PF07733 Bacterial DNA polymerase III alpha NTPase domain DYQ48_RS15870 PF01726 LexA DNA binding domain DYQ48_RS15870 PF00717 Peptidase S24-like DYQ48_RS15890 PF00328 Histidine phosphatase superfamily (branch 2) DYQ48_RS15905 PF04542 Sigma-70 region 2 DYQ48_RS15905 PF08281 Sigma-70, region 4 DYQ48_RS15910 PF00111 2Fe-2S iron-sulfur cluster binding domain DYQ48_RS15910 PF01799 [2Fe-2S] binding domain DYQ48_RS15915 PF00941 FAD binding domain in molybdopterin dehydrogenase DYQ48_RS15915 PF03450 CO dehydrogenase flavoprotein C-terminal domain DYQ48_RS15920 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DYQ48_RS15920 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DYQ48_RS15925 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYQ48_RS15925 PF00933 Glycosyl hydrolase family 3 N terminal domain DYQ48_RS15925 PF14310 Fibronectin type III-like domain DYQ48_RS15935 PF17755 UvrA DNA-binding domain DYQ48_RS15960 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYQ48_RS15970 PF17678 Glycosyl hydrolase family 92 N-terminal domain DYQ48_RS15970 PF07971 Glycosyl hydrolase family 92 DYQ48_RS15995 PF01256 Carbohydrate kinase DYQ48_RS16000 PF00300 Histidine phosphatase superfamily (branch 1) DYQ48_RS16000 PF13456 Reverse transcriptase-like DYQ48_RS16070 PF12008 Type I restriction and modification enzyme - subunit R C terminal DYQ48_RS16070 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DYQ48_RS16070 PF18766 SWI2/SNF2 ATPase DYQ48_RS16090 PF12161 HsdM N-terminal domain DYQ48_RS16090 PF02384 N-6 DNA Methylase DYQ48_RS16120 PF00709 Adenylosuccinate synthetase DYQ48_RS16140 PF01145 SPFH domain / Band 7 family DYQ48_RS16145 PF01145 SPFH domain / Band 7 family DYQ48_RS16145 PF12221 Bacterial membrane protein N terminal DYQ48_RS16150 PF00072 Response regulator receiver domain DYQ48_RS16155 PF01556 DnaJ C terminal domain DYQ48_RS16155 PF00226 DnaJ domain DYQ48_RS16165 PF08534 Redoxin DYQ48_RS16175 PF00905 Penicillin binding protein transpeptidase domain DYQ48_RS16175 PF06832 Penicillin-Binding Protein C-terminus Family DYQ48_RS16175 PF00912 Transglycosylase DYQ48_RS16195 PF17962 Bacterial macroglobulin domain 6 DYQ48_RS16195 PF00207 Alpha-2-macroglobulin family DYQ48_RS16195 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain DYQ48_RS16195 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain DYQ48_RS16195 PF11974 Bacterial alpha-2-macroglobulin MG3 domain DYQ48_RS16195 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain DYQ48_RS16195 PF01835 MG2 domain DYQ48_RS16195 PF07703 Alpha-2-macroglobulin bait region domain DYQ48_RS16205 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS16205 PF00593 TonB dependent receptor DYQ48_RS16210 PF04303 PrpF protein DYQ48_RS16215 PF00694 Aconitase C-terminal domain DYQ48_RS16215 PF00330 Aconitase family (aconitate hydratase) DYQ48_RS16220 PF00285 Citrate synthase, C-terminal domain DYQ48_RS16230 PF00158 Sigma-54 interaction domain DYQ48_RS16230 PF06506 Propionate catabolism activator DYQ48_RS16230 PF02954 Bacterial regulatory protein, Fis family DYQ48_RS16240 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system DYQ48_RS16245 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system DYQ48_RS16260 PF09115 DNA polymerase III, delta subunit, C terminal DYQ48_RS16265 PF02618 YceG-like family DYQ48_RS16270 PF04715 Anthranilate synthase component I, N terminal region DYQ48_RS16270 PF00425 chorismate binding enzyme DYQ48_RS16275 PF00109 Beta-ketoacyl synthase, N-terminal domain DYQ48_RS16275 PF02801 Beta-ketoacyl synthase, C-terminal domain DYQ48_RS16280 PF00550 Phosphopantetheine attachment site DYQ48_RS16290 PF00698 Acyl transferase domain DYQ48_RS16300 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DYQ48_RS16300 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DYQ48_RS16305 PF01783 Ribosomal L32p protein family DYQ48_RS16310 PF02620 Large ribosomal RNA subunit accumulation protein YceD DYQ48_RS16315 PF02545 Maf-like protein DYQ48_RS16330 PF17863 AAA lid domain DYQ48_RS16330 PF07726 ATPase family associated with various cellular activities (AAA) DYQ48_RS16340 PF01841 Transglutaminase-like superfamily DYQ48_RS16340 PF11992 Domain of unknown function (DUF3488) DYQ48_RS16340 PF13559 Domain of unknown function (DUF4129) DYQ48_RS16350 PF01230 HIT domain DYQ48_RS16355 PF02132 RecR protein DYQ48_RS16355 PF13662 Toprim domain DYQ48_RS16360 PF02575 YbaB/EbfC DNA-binding family DYQ48_RS16365 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DYQ48_RS16365 PF12169 DNA polymerase III subunits gamma and tau domain III DYQ48_RS16365 PF12170 DNA polymerase III tau subunit V interacting with alpha DYQ48_RS16400 PF07669 Eco57I restriction-modification methylase DYQ48_RS16400 PF12950 TaqI-like C-terminal specificity domain DYQ48_RS16500 PF02391 MoaE protein DYQ48_RS16505 PF02597 ThiS family DYQ48_RS16510 PF01967 MoaC family DYQ48_RS16515 PF04055 Radical SAM superfamily DYQ48_RS16515 PF06463 Molybdenum Cofactor Synthesis C DYQ48_RS16520 PF12706 Beta-lactamase superfamily domain DYQ48_RS16520 PF00753 Metallo-beta-lactamase superfamily DYQ48_RS16530 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DYQ48_RS16550 PF00929 Exonuclease DYQ48_RS16555 PF00075 RNase H DYQ48_RS16565 PF16123 Hydroxyacylglutathione hydrolase C-terminus DYQ48_RS16565 PF00753 Metallo-beta-lactamase superfamily DYQ48_RS16570 PF05257 CHAP domain DYQ48_RS16570 PF01476 LysM domain DYQ48_RS16595 PF00216 Bacterial DNA-binding protein DYQ48_RS16600 PF02190 ATP-dependent protease La (LON) substrate-binding domain DYQ48_RS16600 PF05362 Lon protease (S16) C-terminal proteolytic domain DYQ48_RS16600 PF00004 ATPase family associated with various cellular activities (AAA) DYQ48_RS16605 PF06689 ClpX C4-type zinc finger DYQ48_RS16605 PF10431 C-terminal, D2-small domain, of ClpB protein DYQ48_RS16605 PF07724 AAA domain (Cdc48 subfamily) DYQ48_RS16610 PF00574 Clp protease DYQ48_RS16615 PF05698 Bacterial trigger factor protein (TF) C-terminus DYQ48_RS16615 PF05697 Bacterial trigger factor protein (TF) DYQ48_RS16625 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS16625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS16625 PF08448 PAS fold DYQ48_RS16625 PF13188 PAS domain DYQ48_RS16625 PF00072 Response regulator receiver domain DYQ48_RS16655 PF01555 DNA methylase DYQ48_RS16940 PF00180 Isocitrate/isopropylmalate dehydrogenase DYQ48_RS16940 PF18324 Hypothetical protein TT1725 DYQ48_RS16950 PF00462 Glutaredoxin DYQ48_RS16955 PF13181 Tetratricopeptide repeat DYQ48_RS16955 PF01435 Peptidase family M48 DYQ48_RS16960 PF00072 Response regulator receiver domain DYQ48_RS16960 PF00486 Transcriptional regulatory protein, C terminal DYQ48_RS16965 PF11808 Phosphate regulon sensor protein PhoR DYQ48_RS16965 PF00989 PAS fold DYQ48_RS16965 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS16965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS16970 PF17941 Polyphosphate kinase C-terminal domain 1 DYQ48_RS16970 PF13089 Polyphosphate kinase N-terminal domain DYQ48_RS16970 PF02503 Polyphosphate kinase middle domain DYQ48_RS16970 PF13090 Polyphosphate kinase C-terminal domain 2 DYQ48_RS16975 PF02541 Ppx/GppA phosphatase family DYQ48_RS16980 PF13439 Glycosyltransferase Family 4 DYQ48_RS16980 PF00534 Glycosyl transferases group 1 DYQ48_RS16985 PF01569 PAP2 superfamily DYQ48_RS16990 PF00149 Calcineurin-like phosphoesterase DYQ48_RS17005 PF04305 Protein of unknown function (DUF455) DYQ48_RS17010 PF00156 Phosphoribosyl transferase domain DYQ48_RS17025 PF02875 Mur ligase family, glutamate ligase domain DYQ48_RS17025 PF08245 Mur ligase middle domain DYQ48_RS17035 PF00300 Histidine phosphatase superfamily (branch 1) DYQ48_RS17040 PF10459 Peptidase S46 DYQ48_RS17045 PF05506 Domain of unknown function (DUF756) DYQ48_RS17045 PF04185 Phosphoesterase family DYQ48_RS17060 PF00107 Zinc-binding dehydrogenase DYQ48_RS17060 PF08240 Alcohol dehydrogenase GroES-like domain DYQ48_RS17075 PF17850 CysA C-terminal regulatory domain DYQ48_RS17075 PF12857 TOBE-like domain DYQ48_RS17075 PF00005 ABC transporter DYQ48_RS17080 PF00528 Binding-protein-dependent transport system inner membrane component DYQ48_RS17085 PF00528 Binding-protein-dependent transport system inner membrane component DYQ48_RS17095 PF00155 Aminotransferase class I and II DYQ48_RS17105 PF00849 RNA pseudouridylate synthase DYQ48_RS17115 PF00691 OmpA family DYQ48_RS17115 PF00223 Photosystem I psaA/psaB protein DYQ48_RS17125 PF08240 Alcohol dehydrogenase GroES-like domain DYQ48_RS17125 PF00107 Zinc-binding dehydrogenase DYQ48_RS17130 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYQ48_RS17130 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DYQ48_RS17145 PF00043 Glutathione S-transferase, C-terminal domain DYQ48_RS17145 PF02798 Glutathione S-transferase, N-terminal domain DYQ48_RS17150 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DYQ48_RS17150 PF00056 lactate/malate dehydrogenase, NAD binding domain DYQ48_RS17155 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DYQ48_RS17160 PF00009 Elongation factor Tu GTP binding domain DYQ48_RS17160 PF00679 Elongation factor G C-terminus DYQ48_RS17160 PF03144 Elongation factor Tu domain 2 DYQ48_RS17170 PF01425 Amidase DYQ48_RS17180 PF01474 Class-II DAHP synthetase family DYQ48_RS17185 PF02600 Disulfide bond formation protein DsbB DYQ48_RS17190 PF01196 Ribosomal protein L17 DYQ48_RS17195 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DYQ48_RS17195 PF01000 RNA polymerase Rpb3/RpoA insert domain DYQ48_RS17195 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DYQ48_RS17200 PF01479 S4 domain DYQ48_RS17200 PF00163 Ribosomal protein S4/S9 N-terminal domain DYQ48_RS17205 PF00411 Ribosomal protein S11 DYQ48_RS17210 PF00416 Ribosomal protein S13/S18 DYQ48_RS17215 PF00344 SecY translocase DYQ48_RS17220 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DYQ48_RS17225 PF00327 Ribosomal protein L30p/L7e DYQ48_RS17230 PF00333 Ribosomal protein S5, N-terminal domain DYQ48_RS17230 PF03719 Ribosomal protein S5, C-terminal domain DYQ48_RS17235 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DYQ48_RS17240 PF00347 Ribosomal protein L6 DYQ48_RS17245 PF00410 Ribosomal protein S8 DYQ48_RS17250 PF00253 Ribosomal protein S14p/S29e DYQ48_RS17255 PF00281 Ribosomal protein L5 DYQ48_RS17255 PF00673 ribosomal L5P family C-terminus DYQ48_RS17260 PF00467 KOW motif DYQ48_RS17260 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DYQ48_RS17265 PF00238 Ribosomal protein L14p/L23e DYQ48_RS17270 PF00366 Ribosomal protein S17 DYQ48_RS17275 PF00831 Ribosomal L29 protein DYQ48_RS17280 PF00252 Ribosomal protein L16p/L10e DYQ48_RS17285 PF07650 KH domain DYQ48_RS17285 PF00189 Ribosomal protein S3, C-terminal domain DYQ48_RS17290 PF00237 Ribosomal protein L22p/L17e DYQ48_RS17295 PF00203 Ribosomal protein S19 DYQ48_RS17300 PF03947 Ribosomal Proteins L2, C-terminal domain DYQ48_RS17300 PF00181 Ribosomal Proteins L2, RNA binding domain DYQ48_RS17305 PF00276 Ribosomal protein L23 DYQ48_RS17310 PF00573 Ribosomal protein L4/L1 family DYQ48_RS17315 PF00297 Ribosomal protein L3 DYQ48_RS17320 PF00338 Ribosomal protein S10p/S20e DYQ48_RS17325 PF00009 Elongation factor Tu GTP binding domain DYQ48_RS17325 PF03144 Elongation factor Tu domain 2 DYQ48_RS17325 PF03143 Elongation factor Tu C-terminal domain DYQ48_RS17330 PF03144 Elongation factor Tu domain 2 DYQ48_RS17330 PF00679 Elongation factor G C-terminus DYQ48_RS17330 PF14492 Elongation Factor G, domain II DYQ48_RS17330 PF03764 Elongation factor G, domain IV DYQ48_RS17330 PF00009 Elongation factor Tu GTP binding domain DYQ48_RS17335 PF00177 Ribosomal protein S7p/S5e DYQ48_RS17340 PF00164 Ribosomal protein S12/S23 DYQ48_RS17345 PF04997 RNA polymerase Rpb1, domain 1 DYQ48_RS17345 PF00623 RNA polymerase Rpb1, domain 2 DYQ48_RS17345 PF04983 RNA polymerase Rpb1, domain 3 DYQ48_RS17345 PF05000 RNA polymerase Rpb1, domain 4 DYQ48_RS17345 PF04998 RNA polymerase Rpb1, domain 5 DYQ48_RS17350 PF04563 RNA polymerase beta subunit DYQ48_RS17350 PF04561 RNA polymerase Rpb2, domain 2 DYQ48_RS17350 PF04565 RNA polymerase Rpb2, domain 3 DYQ48_RS17350 PF10385 RNA polymerase beta subunit external 1 domain DYQ48_RS17350 PF04560 RNA polymerase Rpb2, domain 7 DYQ48_RS17350 PF00562 RNA polymerase Rpb2, domain 6 DYQ48_RS17355 PF16320 Ribosomal protein L7/L12 dimerisation domain DYQ48_RS17355 PF00542 Ribosomal protein L7/L12 C-terminal domain DYQ48_RS17360 PF00466 Ribosomal protein L10 DYQ48_RS17365 PF00687 Ribosomal protein L1p/L10e family DYQ48_RS17370 PF00298 Ribosomal protein L11, RNA binding domain DYQ48_RS17370 PF03946 Ribosomal protein L11, N-terminal domain DYQ48_RS17375 PF02357 Transcription termination factor nusG DYQ48_RS17375 PF00467 KOW motif DYQ48_RS17380 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DYQ48_RS17390 PF03144 Elongation factor Tu domain 2 DYQ48_RS17390 PF03143 Elongation factor Tu C-terminal domain DYQ48_RS17390 PF00009 Elongation factor Tu GTP binding domain DYQ48_RS17420 PF04851 Type III restriction enzyme, res subunit DYQ48_RS17420 PF08774 VRR-NUC domain DYQ48_RS17425 PF01555 DNA methylase DYQ48_RS17425 PF18273 Type III R-M EcoP15I C-terminal domain DYQ48_RS17455 PF13356 Arm DNA-binding domain DYQ48_RS17455 PF00589 Phage integrase family DYQ48_RS17460 PF06071 Protein of unknown function (DUF933) DYQ48_RS17460 PF01926 50S ribosome-binding GTPase DYQ48_RS17465 PF01195 Peptidyl-tRNA hydrolase DYQ48_RS17470 PF14693 Ribosomal protein TL5, C-terminal domain DYQ48_RS17470 PF01386 Ribosomal L25p family DYQ48_RS17475 PF14572 Phosphoribosyl synthetase-associated domain DYQ48_RS17475 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DYQ48_RS17485 PF08544 GHMP kinases C terminal DYQ48_RS17485 PF00288 GHMP kinases N terminal domain DYQ48_RS17490 PF03550 Outer membrane lipoprotein LolB DYQ48_RS17500 PF01488 Shikimate / quinate 5-dehydrogenase DYQ48_RS17500 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DYQ48_RS17500 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DYQ48_RS17505 PF03462 PCRF domain DYQ48_RS17505 PF00472 RF-1 domain DYQ48_RS17520 PF00994 Probable molybdopterin binding domain DYQ48_RS17525 PF03976 Polyphosphate kinase 2 (PPK2) DYQ48_RS17535 PF00708 Acylphosphatase DYQ48_RS17540 PF08534 Redoxin DYQ48_RS17545 PF03631 Virulence factor BrkB DYQ48_RS17550 PF03358 NADPH-dependent FMN reductase DYQ48_RS17565 PF04073 Aminoacyl-tRNA editing domain DYQ48_RS17570 PF00082 Subtilase family DYQ48_RS17570 PF04151 Bacterial pre-peptidase C-terminal domain DYQ48_RS17580 PF00082 Subtilase family DYQ48_RS17580 PF04151 Bacterial pre-peptidase C-terminal domain DYQ48_RS17585 PF01063 Amino-transferase class IV DYQ48_RS17635 PF01367 5'-3' exonuclease, C-terminal SAM fold DYQ48_RS17635 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DYQ48_RS17635 PF01612 3'-5' exonuclease DYQ48_RS17635 PF00476 DNA polymerase family A DYQ48_RS17640 PF00293 NUDIX domain DYQ48_RS17650 PF00561 alpha/beta hydrolase fold DYQ48_RS17655 PF17827 PrmC N-terminal domain DYQ48_RS17655 PF05175 Methyltransferase small domain DYQ48_RS17660 PF00578 AhpC/TSA family DYQ48_RS17660 PF10417 C-terminal domain of 1-Cys peroxiredoxin DYQ48_RS17665 PF13192 Thioredoxin domain DYQ48_RS17665 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYQ48_RS17670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS17670 PF03466 LysR substrate binding domain DYQ48_RS17675 PF14760 Rnk N-terminus DYQ48_RS17675 PF01272 Transcription elongation factor, GreA/GreB, C-term DYQ48_RS17680 PF00923 Transaldolase/Fructose-6-phosphate aldolase DYQ48_RS17690 PF01625 Peptide methionine sulfoxide reductase DYQ48_RS17700 PF00196 Bacterial regulatory proteins, luxR family DYQ48_RS17700 PF00072 Response regulator receiver domain DYQ48_RS17705 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DYQ48_RS17705 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS17705 PF01627 Hpt domain DYQ48_RS17705 PF00072 Response regulator receiver domain DYQ48_RS17705 PF00672 HAMP domain DYQ48_RS17705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS17710 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS17710 PF00072 Response regulator receiver domain DYQ48_RS17725 PF00749 tRNA synthetases class I (E and Q), catalytic domain DYQ48_RS17725 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DYQ48_RS17730 PF00892 EamA-like transporter family DYQ48_RS17745 PF18125 RlmM ferredoxin-like domain DYQ48_RS17745 PF01728 FtsJ-like methyltransferase DYQ48_RS17750 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DYQ48_RS17750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYQ48_RS17755 PF08450 SMP-30/Gluconolactonase/LRE-like region DYQ48_RS17775 PF00378 Enoyl-CoA hydratase/isomerase DYQ48_RS17780 PF00171 Aldehyde dehydrogenase family DYQ48_RS17785 PF00501 AMP-binding enzyme DYQ48_RS17785 PF13193 AMP-binding enzyme C-terminal domain DYQ48_RS17790 PF03466 LysR substrate binding domain DYQ48_RS17790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS17795 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit DYQ48_RS17795 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DYQ48_RS17800 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DYQ48_RS17805 PF00392 Bacterial regulatory proteins, gntR family DYQ48_RS17805 PF07729 FCD domain DYQ48_RS17825 PF01494 FAD binding domain DYQ48_RS17830 PF01494 FAD binding domain DYQ48_RS17840 PF01923 Cobalamin adenosyltransferase DYQ48_RS17845 PF00850 Histone deacetylase domain DYQ48_RS17850 PF04453 LPS transport system D DYQ48_RS17850 PF03968 OstA-like protein DYQ48_RS17855 PF00639 PPIC-type PPIASE domain DYQ48_RS17855 PF09312 SurA N-terminal domain DYQ48_RS17860 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DYQ48_RS17865 PF00398 Ribosomal RNA adenine dimethylase DYQ48_RS17870 PF04379 ApaG domain DYQ48_RS17875 PF00149 Calcineurin-like phosphoesterase DYQ48_RS17880 PF03358 NADPH-dependent FMN reductase DYQ48_RS17885 PF00296 Luciferase-like monooxygenase DYQ48_RS17895 PF00528 Binding-protein-dependent transport system inner membrane component DYQ48_RS17900 PF00005 ABC transporter DYQ48_RS17905 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DYQ48_RS17905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYQ48_RS17910 PF00186 Dihydrofolate reductase DYQ48_RS17915 PF00303 Thymidylate synthase DYQ48_RS17920 PF01790 Prolipoprotein diacylglyceryl transferase DYQ48_RS17940 PF01219 Prokaryotic diacylglycerol kinase DYQ48_RS17950 PF08521 Two-component sensor kinase N-terminal DYQ48_RS17950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS17950 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS17955 PF00072 Response regulator receiver domain DYQ48_RS17955 PF00486 Transcriptional regulatory protein, C terminal DYQ48_RS17960 PF13472 GDSL-like Lipase/Acylhydrolase family DYQ48_RS17965 PF00005 ABC transporter DYQ48_RS17975 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DYQ48_RS17985 PF00005 ABC transporter DYQ48_RS17990 PF00528 Binding-protein-dependent transport system inner membrane component DYQ48_RS18055 PF00593 TonB dependent receptor DYQ48_RS18055 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS18065 PF00248 Aldo/keto reductase family DYQ48_RS18070 PF07662 Na+ dependent nucleoside transporter C-terminus DYQ48_RS18070 PF01773 Na+ dependent nucleoside transporter N-terminus DYQ48_RS18070 PF07670 Nucleoside recognition DYQ48_RS18075 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DYQ48_RS18075 PF00294 pfkB family carbohydrate kinase DYQ48_RS18085 PF01207 Dihydrouridine synthase (Dus) DYQ48_RS18090 PF13649 Methyltransferase domain DYQ48_RS18100 PF00438 S-adenosylmethionine synthetase, N-terminal domain DYQ48_RS18100 PF02772 S-adenosylmethionine synthetase, central domain DYQ48_RS18100 PF02773 S-adenosylmethionine synthetase, C-terminal domain DYQ48_RS18110 PF00328 Histidine phosphatase superfamily (branch 2) DYQ48_RS18115 PF00223 Photosystem I psaA/psaB protein DYQ48_RS18115 PF00691 OmpA family DYQ48_RS18135 PF00311 Phosphoenolpyruvate carboxylase DYQ48_RS18145 PF05221 S-adenosyl-L-homocysteine hydrolase DYQ48_RS18145 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DYQ48_RS18185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYQ48_RS18200 PF02801 Beta-ketoacyl synthase, C-terminal domain DYQ48_RS18200 PF16197 Ketoacyl-synthetase C-terminal extension DYQ48_RS18200 PF00550 Phosphopantetheine attachment site DYQ48_RS18200 PF08659 KR domain DYQ48_RS18200 PF00109 Beta-ketoacyl synthase, N-terminal domain DYQ48_RS18200 PF14765 Polyketide synthase dehydratase DYQ48_RS18200 PF00107 Zinc-binding dehydrogenase DYQ48_RS18200 PF08240 Alcohol dehydrogenase GroES-like domain DYQ48_RS18200 PF00698 Acyl transferase domain DYQ48_RS18210 PF02219 Methylenetetrahydrofolate reductase DYQ48_RS18230 PF00293 NUDIX domain DYQ48_RS18240 PF07516 SecA Wing and Scaffold domain DYQ48_RS18240 PF07517 SecA DEAD-like domain DYQ48_RS18240 PF01043 SecA preprotein cross-linking domain DYQ48_RS18240 PF02810 SEC-C motif DYQ48_RS18245 PF08525 Opacity-associated protein A N-terminal motif DYQ48_RS18245 PF01551 Peptidase family M23 DYQ48_RS18245 PF01476 LysM domain DYQ48_RS18255 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DYQ48_RS18260 PF12327 FtsZ family, C-terminal domain DYQ48_RS18260 PF00091 Tubulin/FtsZ family, GTPase domain DYQ48_RS18270 PF02491 SHS2 domain inserted in FTSA DYQ48_RS18275 PF08478 POTRA domain, FtsQ-type DYQ48_RS18275 PF03799 Cell division protein FtsQ DYQ48_RS18280 PF07478 D-ala D-ala ligase C-terminus DYQ48_RS18280 PF01820 D-ala D-ala ligase N-terminus DYQ48_RS18285 PF01225 Mur ligase family, catalytic domain DYQ48_RS18285 PF02875 Mur ligase family, glutamate ligase domain DYQ48_RS18285 PF08245 Mur ligase middle domain DYQ48_RS18290 PF03033 Glycosyltransferase family 28 N-terminal domain DYQ48_RS18290 PF04101 Glycosyltransferase family 28 C-terminal domain DYQ48_RS18295 PF01098 Cell cycle protein DYQ48_RS18300 PF00953 Glycosyl transferase family 4 DYQ48_RS18305 PF02875 Mur ligase family, glutamate ligase domain DYQ48_RS18305 PF01225 Mur ligase family, catalytic domain DYQ48_RS18305 PF08245 Mur ligase middle domain DYQ48_RS18310 PF01225 Mur ligase family, catalytic domain DYQ48_RS18310 PF02875 Mur ligase family, glutamate ligase domain DYQ48_RS18310 PF08245 Mur ligase middle domain DYQ48_RS18315 PF00905 Penicillin binding protein transpeptidase domain DYQ48_RS18315 PF03717 Penicillin-binding Protein dimerisation domain DYQ48_RS18320 PF04999 Cell division protein FtsL DYQ48_RS18325 PF01795 MraW methylase family DYQ48_RS18330 PF02381 MraZ protein, putative antitoxin-like DYQ48_RS18355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYQ48_RS18365 PF02021 Uncharacterised protein family UPF0102 DYQ48_RS18370 PF04307 LexA-binding, inner membrane-associated putative hydrolase DYQ48_RS18375 PF01565 FAD binding domain DYQ48_RS18375 PF02913 FAD linked oxidases, C-terminal domain DYQ48_RS18380 PF00072 Response regulator receiver domain DYQ48_RS18380 PF00486 Transcriptional regulatory protein, C terminal DYQ48_RS18385 PF02702 Osmosensitive K+ channel His kinase sensor domain DYQ48_RS18385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS18385 PF13493 Domain of unknown function (DUF4118) DYQ48_RS18385 PF13492 GAF domain DYQ48_RS18385 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS18390 PF02669 K+-transporting ATPase, c chain DYQ48_RS18400 PF03814 Potassium-transporting ATPase A subunit DYQ48_RS18430 PF02769 AIR synthase related protein, C-terminal domain DYQ48_RS18430 PF00586 AIR synthase related protein, N-terminal domain DYQ48_RS18435 PF01029 NusB family DYQ48_RS18440 PF00885 6,7-dimethyl-8-ribityllumazine synthase DYQ48_RS18450 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DYQ48_RS18450 PF00925 GTP cyclohydrolase II DYQ48_RS18455 PF00677 Lumazine binding domain DYQ48_RS18470 PF01872 RibD C-terminal domain DYQ48_RS18470 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DYQ48_RS18480 PF03477 ATP cone domain DYQ48_RS18485 PF00464 Serine hydroxymethyltransferase DYQ48_RS18495 PF12848 ABC transporter DYQ48_RS18495 PF00005 ABC transporter DYQ48_RS18500 PF01327 Polypeptide deformylase DYQ48_RS18515 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DYQ48_RS18515 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DYQ48_RS18550 PF00593 TonB dependent receptor DYQ48_RS18550 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS18560 PF07702 UTRA domain DYQ48_RS18560 PF00392 Bacterial regulatory proteins, gntR family DYQ48_RS18600 PF00263 Bacterial type II and III secretion system protein DYQ48_RS18600 PF03958 Bacterial type II/III secretion system short domain DYQ48_RS18610 PF10741 Type II secretion system (T2SS), protein M subtype b DYQ48_RS18615 PF05137 Fimbrial assembly protein (PilN) DYQ48_RS18620 PF03934 Type II secretion system (T2SS), protein K DYQ48_RS18630 PF07963 Prokaryotic N-terminal methylation motif DYQ48_RS18635 PF12019 Type II transport protein GspH DYQ48_RS18640 PF08334 Type II secretion system (T2SS), protein G DYQ48_RS18645 PF00482 Type II secretion system (T2SS), protein F DYQ48_RS18650 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DYQ48_RS18650 PF00437 Type II/IV secretion system protein DYQ48_RS18655 PF04151 Bacterial pre-peptidase C-terminal domain DYQ48_RS18655 PF00082 Subtilase family DYQ48_RS18660 PF05658 Head domain of trimeric autotransporter adhesin DYQ48_RS18660 PF03895 YadA-like membrane anchor domain DYQ48_RS18660 PF13018 Extended Signal Peptide of Type V secretion system DYQ48_RS18660 PF05662 Coiled stalk of trimeric autotransporter adhesin DYQ48_RS18670 PF00082 Subtilase family DYQ48_RS18670 PF04151 Bacterial pre-peptidase C-terminal domain DYQ48_RS18675 PF05662 Coiled stalk of trimeric autotransporter adhesin DYQ48_RS18675 PF03895 YadA-like membrane anchor domain DYQ48_RS18675 PF13018 Extended Signal Peptide of Type V secretion system DYQ48_RS18675 PF05658 Head domain of trimeric autotransporter adhesin DYQ48_RS18680 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DYQ48_RS18680 PF02769 AIR synthase related protein, C-terminal domain DYQ48_RS18680 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DYQ48_RS18685 PF10411 Disulfide bond isomerase protein N-terminus DYQ48_RS18685 PF13098 Thioredoxin-like domain DYQ48_RS18690 PF00589 Phage integrase family DYQ48_RS18690 PF02899 Phage integrase, N-terminal SAM-like domain DYQ48_RS18705 PF03739 Lipopolysaccharide export system permease LptF/LptG DYQ48_RS18715 PF02789 Cytosol aminopeptidase family, N-terminal domain DYQ48_RS18715 PF00883 Cytosol aminopeptidase family, catalytic domain DYQ48_RS18725 PF00133 tRNA synthetases class I (I, L, M and V) DYQ48_RS18725 PF08264 Anticodon-binding domain of tRNA DYQ48_RS18725 PF10458 Valyl tRNA synthetase tRNA binding arm DYQ48_RS18735 PF00544 Pectate lyase DYQ48_RS18750 PF01066 CDP-alcohol phosphatidyltransferase DYQ48_RS18760 PF04073 Aminoacyl-tRNA editing domain DYQ48_RS18760 PF03129 Anticodon binding domain DYQ48_RS18760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYQ48_RS18775 PF02405 Permease MlaE DYQ48_RS18780 PF00005 ABC transporter DYQ48_RS18785 PF03886 ABC-type transport auxiliary lipoprotein component DYQ48_RS18785 PF02470 MlaD protein DYQ48_RS18810 PF05045 Rhamnan synthesis protein F DYQ48_RS18810 PF14307 Glycosyltransferase WbsX DYQ48_RS18820 PF01144 Coenzyme A transferase DYQ48_RS18825 PF01144 Coenzyme A transferase DYQ48_RS18830 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DYQ48_RS18830 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DYQ48_RS18830 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DYQ48_RS18830 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DYQ48_RS18835 PF01050 Mannose-6-phosphate isomerase DYQ48_RS18835 PF00483 Nucleotidyl transferase DYQ48_RS18840 PF04321 RmlD substrate binding domain DYQ48_RS18845 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DYQ48_RS18850 PF00483 Nucleotidyl transferase DYQ48_RS18855 PF16363 GDP-mannose 4,6 dehydratase DYQ48_RS18860 PF01012 Electron transfer flavoprotein domain DYQ48_RS18865 PF01012 Electron transfer flavoprotein domain DYQ48_RS18865 PF00766 Electron transfer flavoprotein FAD-binding domain DYQ48_RS18875 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DYQ48_RS18880 PF00535 Glycosyl transferase family 2 DYQ48_RS18900 PF16363 GDP-mannose 4,6 dehydratase DYQ48_RS18905 PF16363 GDP-mannose 4,6 dehydratase DYQ48_RS18920 PF13439 Glycosyltransferase Family 4 DYQ48_RS18920 PF00534 Glycosyl transferases group 1 DYQ48_RS18925 PF13847 Methyltransferase domain DYQ48_RS18925 PF00069 Protein kinase domain DYQ48_RS18930 PF00005 ABC transporter DYQ48_RS18945 PF01053 Cys/Met metabolism PLP-dependent enzyme DYQ48_RS18950 PF00291 Pyridoxal-phosphate dependent enzyme DYQ48_RS18950 PF00571 CBS domain DYQ48_RS18970 PF00437 Type II/IV secretion system protein DYQ48_RS18975 PF14497 Glutathione S-transferase, C-terminal domain DYQ48_RS18975 PF02798 Glutathione S-transferase, N-terminal domain DYQ48_RS18990 PF00270 DEAD/DEAH box helicase DYQ48_RS18990 PF00271 Helicase conserved C-terminal domain DYQ48_RS19000 PF00593 TonB dependent receptor DYQ48_RS19000 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS19005 PF01242 6-pyruvoyl tetrahydropterin synthase DYQ48_RS19020 PF13185 GAF domain DYQ48_RS19030 PF00756 Putative esterase DYQ48_RS19035 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS19035 PF00593 TonB dependent receptor DYQ48_RS19040 PF13419 Haloacid dehalogenase-like hydrolase DYQ48_RS19045 PF00817 impB/mucB/samB family DYQ48_RS19045 PF11799 impB/mucB/samB family C-terminal domain DYQ48_RS19045 PF11798 IMS family HHH motif DYQ48_RS19050 PF07977 FabA-like domain DYQ48_RS19055 PF00109 Beta-ketoacyl synthase, N-terminal domain DYQ48_RS19055 PF02801 Beta-ketoacyl synthase, C-terminal domain DYQ48_RS19065 PF01432 Peptidase family M3 DYQ48_RS19080 PF07731 Multicopper oxidase DYQ48_RS19080 PF00394 Multicopper oxidase DYQ48_RS19080 PF07732 Multicopper oxidase DYQ48_RS19085 PF05275 Copper resistance protein B precursor (CopB) DYQ48_RS19090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DYQ48_RS19110 PF13545 Crp-like helix-turn-helix domain DYQ48_RS19110 PF00027 Cyclic nucleotide-binding domain DYQ48_RS19115 PF01380 SIS domain DYQ48_RS19120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYQ48_RS19125 PF00005 ABC transporter DYQ48_RS19130 PF12704 MacB-like periplasmic core domain DYQ48_RS19130 PF00005 ABC transporter DYQ48_RS19130 PF02687 FtsX-like permease family DYQ48_RS19135 PF02687 FtsX-like permease family DYQ48_RS19135 PF12704 MacB-like periplasmic core domain DYQ48_RS19140 PF00158 Sigma-54 interaction domain DYQ48_RS19140 PF00072 Response regulator receiver domain DYQ48_RS19140 PF02954 Bacterial regulatory protein, Fis family DYQ48_RS19145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS19145 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS19155 PF14602 Hexapeptide repeat of succinyl-transferase DYQ48_RS19155 PF12804 MobA-like NTP transferase domain DYQ48_RS19155 PF00132 Bacterial transferase hexapeptide (six repeats) DYQ48_RS19165 PF01817 Chorismate mutase type II DYQ48_RS19170 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DYQ48_RS19170 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DYQ48_RS19175 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYQ48_RS19175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYQ48_RS19180 PF00231 ATP synthase DYQ48_RS19185 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYQ48_RS19185 PF00306 ATP synthase alpha/beta chain, C terminal domain DYQ48_RS19185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYQ48_RS19190 PF00213 ATP synthase delta (OSCP) subunit DYQ48_RS19195 PF00430 ATP synthase B/B' CF(0) DYQ48_RS19200 PF00137 ATP synthase subunit C DYQ48_RS19205 PF00119 ATP synthase A chain DYQ48_RS19220 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYQ48_RS19220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYQ48_RS19230 PF02817 e3 binding domain DYQ48_RS19230 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DYQ48_RS19230 PF00364 Biotin-requiring enzyme DYQ48_RS19255 PF03180 NLPA lipoprotein DYQ48_RS19260 PF00528 Binding-protein-dependent transport system inner membrane component DYQ48_RS19265 PF00005 ABC transporter DYQ48_RS19265 PF09383 NIL domain DYQ48_RS19270 PF00892 EamA-like transporter family DYQ48_RS19295 PF01479 S4 domain DYQ48_RS19295 PF00849 RNA pseudouridylate synthase DYQ48_RS19300 PF08468 Methyltransferase small domain N-terminal DYQ48_RS19300 PF05175 Methyltransferase small domain DYQ48_RS19315 PF07995 Glucose / Sorbosone dehydrogenase DYQ48_RS19325 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS19325 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYQ48_RS19325 PF00072 Response regulator receiver domain DYQ48_RS19325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS19345 PF01168 Alanine racemase, N-terminal domain DYQ48_RS19345 PF00842 Alanine racemase, C-terminal domain DYQ48_RS19350 PF01266 FAD dependent oxidoreductase DYQ48_RS19355 PF01037 Lrp/AsnC ligand binding domain DYQ48_RS19365 PF01641 SelR domain DYQ48_RS19380 PF01618 MotA/TolQ/ExbB proton channel family DYQ48_RS19385 PF00691 OmpA family DYQ48_RS19385 PF13677 Membrane MotB of proton-channel complex MotA/MotB DYQ48_RS19410 PF05598 Transposase domain (DUF772) DYQ48_RS19410 PF01609 Transposase DDE domain DYQ48_RS19440 PF00005 ABC transporter DYQ48_RS19440 PF03412 Peptidase C39 family DYQ48_RS19440 PF00664 ABC transporter transmembrane region DYQ48_RS19465 PF01061 ABC-2 type transporter DYQ48_RS19470 PF00005 ABC transporter DYQ48_RS19480 PF00999 Sodium/hydrogen exchanger family DYQ48_RS19490 PF02469 Fasciclin domain DYQ48_RS19495 PF03167 Uracil DNA glycosylase superfamily DYQ48_RS19510 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DYQ48_RS19520 PF03466 LysR substrate binding domain DYQ48_RS19520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS19525 PF03358 NADPH-dependent FMN reductase DYQ48_RS19530 PF00248 Aldo/keto reductase family DYQ48_RS19540 PF05649 Peptidase family M13 DYQ48_RS19540 PF01431 Peptidase family M13 DYQ48_RS19560 PF13520 Amino acid permease DYQ48_RS19570 PF00072 Response regulator receiver domain DYQ48_RS19570 PF04397 LytTr DNA-binding domain DYQ48_RS19575 PF06580 Histidine kinase DYQ48_RS19575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS19575 PF00672 HAMP domain DYQ48_RS19575 PF02743 Cache domain DYQ48_RS19595 PF05974 Domain of unknown function (DUF892) DYQ48_RS19600 PF05067 Manganese containing catalase DYQ48_RS19610 PF03705 CheR methyltransferase, all-alpha domain DYQ48_RS19610 PF01739 CheR methyltransferase, SAM binding domain DYQ48_RS19610 PF08448 PAS fold DYQ48_RS19610 PF01339 CheB methylesterase DYQ48_RS19625 PF02954 Bacterial regulatory protein, Fis family DYQ48_RS19625 PF00158 Sigma-54 interaction domain DYQ48_RS19625 PF00072 Response regulator receiver domain DYQ48_RS19650 PF16363 GDP-mannose 4,6 dehydratase DYQ48_RS19660 PF03275 UDP-galactopyranose mutase DYQ48_RS19670 PF00664 ABC transporter transmembrane region DYQ48_RS19670 PF00005 ABC transporter DYQ48_RS19685 PF13823 Alcohol dehydrogenase GroES-associated DYQ48_RS19685 PF08240 Alcohol dehydrogenase GroES-like domain DYQ48_RS19685 PF00107 Zinc-binding dehydrogenase DYQ48_RS19705 PF03466 LysR substrate binding domain DYQ48_RS19705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS19710 PF07690 Major Facilitator Superfamily DYQ48_RS19735 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS19735 PF00593 TonB dependent receptor DYQ48_RS19750 PF00005 ABC transporter DYQ48_RS19760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS19760 PF03466 LysR substrate binding domain DYQ48_RS19765 PF01042 Endoribonuclease L-PSP DYQ48_RS19790 PF00916 Sulfate permease family DYQ48_RS19790 PF01740 STAS domain DYQ48_RS19810 PF01965 DJ-1/PfpI family DYQ48_RS19810 PF12833 Helix-turn-helix domain DYQ48_RS19820 PF07690 Major Facilitator Superfamily DYQ48_RS19825 PF00440 Bacterial regulatory proteins, tetR family DYQ48_RS19830 PF03466 LysR substrate binding domain DYQ48_RS19830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS19835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DYQ48_RS19855 PF04542 Sigma-70 region 2 DYQ48_RS19855 PF04539 Sigma-70 region 3 DYQ48_RS19855 PF04545 Sigma-70, region 4 DYQ48_RS19855 PF04546 Sigma-70, non-essential region DYQ48_RS19855 PF00140 Sigma-70 factor, region 1.2 DYQ48_RS19855 PF03979 Sigma-70 factor, region 1.1 DYQ48_RS19860 PF02580 D-Tyr-tRNA(Tyr) deacylase DYQ48_RS19865 PF03279 Bacterial lipid A biosynthesis acyltransferase DYQ48_RS19875 PF00925 GTP cyclohydrolase II DYQ48_RS19900 PF00535 Glycosyl transferase family 2 DYQ48_RS19915 PF01189 16S rRNA methyltransferase RsmB/F DYQ48_RS19915 PF01029 NusB family DYQ48_RS19920 PF00551 Formyl transferase DYQ48_RS19920 PF02911 Formyl transferase, C-terminal domain DYQ48_RS19925 PF01327 Polypeptide deformylase DYQ48_RS19930 PF01476 LysM domain DYQ48_RS19935 PF17782 DprA winged helix domain DYQ48_RS19935 PF02481 DNA recombination-mediator protein A DYQ48_RS19940 PF04361 Protein of unknown function (DUF494) DYQ48_RS19945 PF07963 Prokaryotic N-terminal methylation motif DYQ48_RS19945 PF00114 Pilin (bacterial filament) DYQ48_RS19955 PF01131 DNA topoisomerase DYQ48_RS19955 PF01751 Toprim domain DYQ48_RS19955 PF13368 Topoisomerase C-terminal repeat DYQ48_RS19960 PF01300 Telomere recombination DYQ48_RS19985 PF01343 Peptidase family S49 DYQ48_RS19990 PF01554 MatE DYQ48_RS20005 PF18074 Primosomal protein N C-terminal domain DYQ48_RS20005 PF17764 3′ DNA-binding domain (3′BD) DYQ48_RS20005 PF00271 Helicase conserved C-terminal domain DYQ48_RS20005 PF00270 DEAD/DEAH box helicase DYQ48_RS20005 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DYQ48_RS20015 PF00043 Glutathione S-transferase, C-terminal domain DYQ48_RS20015 PF13417 Glutathione S-transferase, N-terminal domain DYQ48_RS20035 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYQ48_RS20040 PF03458 UPF0126 domain DYQ48_RS20045 PF04545 Sigma-70, region 4 DYQ48_RS20045 PF04542 Sigma-70 region 2 DYQ48_RS20050 PF03167 Uracil DNA glycosylase superfamily DYQ48_RS20055 PF00072 Response regulator receiver domain DYQ48_RS20060 PF18075 FtsX extracellular domain DYQ48_RS20065 PF00005 ABC transporter DYQ48_RS20070 PF12300 ATP-dependent RNA helicase RhlB DYQ48_RS20070 PF00271 Helicase conserved C-terminal domain DYQ48_RS20070 PF00270 DEAD/DEAH box helicase DYQ48_RS20075 PF00085 Thioredoxin DYQ48_RS20080 PF07497 Rho termination factor, RNA-binding domain DYQ48_RS20080 PF07498 Rho termination factor, N-terminal domain DYQ48_RS20080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYQ48_RS20100 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) DYQ48_RS20105 PF00072 Response regulator receiver domain DYQ48_RS20105 PF00196 Bacterial regulatory proteins, luxR family DYQ48_RS20115 PF03971 Monomeric isocitrate dehydrogenase DYQ48_RS20125 PF01476 LysM domain DYQ48_RS20125 PF00756 Putative esterase DYQ48_RS20130 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DYQ48_RS20130 PF14489 QueF-like protein DYQ48_RS20135 PF07687 Peptidase dimerisation domain DYQ48_RS20135 PF01546 Peptidase family M20/M25/M40 DYQ48_RS20140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYQ48_RS20145 PF00873 AcrB/AcrD/AcrF family DYQ48_RS20150 PF00873 AcrB/AcrD/AcrF family DYQ48_RS20160 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DYQ48_RS20160 PF13378 Enolase C-terminal domain-like DYQ48_RS20170 PF01510 N-acetylmuramoyl-L-alanine amidase DYQ48_RS20175 PF01427 D-ala-D-ala dipeptidase DYQ48_RS20215 PF07063 Domain of unknown function (DUF1338) DYQ48_RS20235 PF13520 Amino acid permease DYQ48_RS20250 PF05360 yiaA/B two helix domain DYQ48_RS20255 PF07995 Glucose / Sorbosone dehydrogenase DYQ48_RS20265 PF00933 Glycosyl hydrolase family 3 N terminal domain DYQ48_RS20265 PF14310 Fibronectin type III-like domain DYQ48_RS20265 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYQ48_RS20270 PF02152 Dihydroneopterin aldolase DYQ48_RS20275 PF00814 Glycoprotease family DYQ48_RS20280 PF01165 Ribosomal protein S21 DYQ48_RS20285 PF09424 Yqey-like protein DYQ48_RS20290 PF03631 Virulence factor BrkB DYQ48_RS20295 PF08275 DNA primase catalytic core, N-terminal domain DYQ48_RS20295 PF08278 DNA primase DnaG DnaB-binding DYQ48_RS20295 PF01807 CHC2 zinc finger DYQ48_RS20295 PF10410 DnaB-helicase binding domain of primase DYQ48_RS20300 PF13593 SBF-like CPA transporter family (DUF4137) DYQ48_RS20310 PF01040 UbiA prenyltransferase family DYQ48_RS20335 PF00510 Cytochrome c oxidase subunit III DYQ48_RS20340 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 DYQ48_RS20350 PF00115 Cytochrome C and Quinol oxidase polypeptide I DYQ48_RS20355 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DYQ48_RS20355 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DYQ48_RS20365 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DYQ48_RS20365 PF14850 DNA-binding domain of Proline dehydrogenase DYQ48_RS20365 PF01619 Proline dehydrogenase DYQ48_RS20365 PF00171 Aldehyde dehydrogenase family DYQ48_RS20395 PF00579 tRNA synthetases class I (W and Y) DYQ48_RS20400 PF04225 Opacity-associated protein A LysM-like domain DYQ48_RS20400 PF01551 Peptidase family M23 DYQ48_RS20405 PF03702 Anhydro-N-acetylmuramic acid kinase DYQ48_RS20415 PF07690 Major Facilitator Superfamily DYQ48_RS20420 PF03372 Endonuclease/Exonuclease/phosphatase family DYQ48_RS20425 PF00156 Phosphoribosyl transferase domain DYQ48_RS20435 PF13614 AAA domain DYQ48_RS20440 PF17762 HTH domain found in ParB protein DYQ48_RS20440 PF02195 ParB-like nuclease domain DYQ48_RS20450 PF01370 NAD dependent epimerase/dehydratase family DYQ48_RS20455 PF00535 Glycosyl transferase family 2 DYQ48_RS20470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DYQ48_RS20470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DYQ48_RS20470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DYQ48_RS20470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DYQ48_RS20475 PF00692 dUTPase DYQ48_RS20480 PF04127 DNA / pantothenate metabolism flavoprotein DYQ48_RS20480 PF02441 Flavoprotein DYQ48_RS20485 PF04002 RadC-like JAB domain DYQ48_RS20490 PF00750 tRNA synthetases class I (R) DYQ48_RS20490 PF03485 Arginyl tRNA synthetase N terminal domain DYQ48_RS20490 PF05746 DALR anticodon binding domain DYQ48_RS20500 PF00106 short chain dehydrogenase DYQ48_RS20505 PF01757 Acyltransferase family DYQ48_RS20510 PF03033 Glycosyltransferase family 28 N-terminal domain DYQ48_RS20515 PF00668 Condensation domain DYQ48_RS20515 PF00550 Phosphopantetheine attachment site DYQ48_RS20515 PF00975 Thioesterase domain DYQ48_RS20515 PF13193 AMP-binding enzyme C-terminal domain DYQ48_RS20515 PF00501 AMP-binding enzyme DYQ48_RS20520 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DYQ48_RS20520 PF17944 Arginine decarboxylase C-terminal helical extension DYQ48_RS20520 PF17810 Arginine decarboxylase helical bundle domain DYQ48_RS20525 PF17284 Spermidine synthase tetramerisation domain DYQ48_RS20550 PF00543 Nitrogen regulatory protein P-II DYQ48_RS20555 PF04380 Membrane fusogenic activity DYQ48_RS20560 PF01078 Magnesium chelatase, subunit ChlI DYQ48_RS20560 PF13335 Magnesium chelatase, subunit ChlI C-terminal DYQ48_RS20580 PF00563 EAL domain DYQ48_RS20580 PF12792 CSS motif domain associated with EAL DYQ48_RS20585 PF00487 Fatty acid desaturase DYQ48_RS20590 PF00111 2Fe-2S iron-sulfur cluster binding domain DYQ48_RS20590 PF00175 Oxidoreductase NAD-binding domain DYQ48_RS20590 PF00970 Oxidoreductase FAD-binding domain DYQ48_RS20595 PF00440 Bacterial regulatory proteins, tetR family DYQ48_RS20630 PF01370 NAD dependent epimerase/dehydratase family DYQ48_RS20630 PF08338 Domain of unknown function (DUF1731) DYQ48_RS20635 PF00072 Response regulator receiver domain DYQ48_RS20635 PF00486 Transcriptional regulatory protein, C terminal DYQ48_RS20640 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS20640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS20640 PF08521 Two-component sensor kinase N-terminal DYQ48_RS20660 PF00595 PDZ domain DYQ48_RS20660 PF13180 PDZ domain DYQ48_RS20680 PF01594 AI-2E family transporter DYQ48_RS20685 PF13419 Haloacid dehalogenase-like hydrolase DYQ48_RS20690 PF02789 Cytosol aminopeptidase family, N-terminal domain DYQ48_RS20690 PF00883 Cytosol aminopeptidase family, catalytic domain DYQ48_RS20715 PF00072 Response regulator receiver domain DYQ48_RS20715 PF00196 Bacterial regulatory proteins, luxR family DYQ48_RS20720 PF07730 Histidine kinase DYQ48_RS20725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYQ48_RS20730 PF00005 ABC transporter DYQ48_RS20750 PF00892 EamA-like transporter family DYQ48_RS20755 PF00892 EamA-like transporter family DYQ48_RS20780 PF00753 Metallo-beta-lactamase superfamily DYQ48_RS20785 PF00579 tRNA synthetases class I (W and Y) DYQ48_RS20790 PF05532 CsbD-like DYQ48_RS20805 PF00491 Arginase family DYQ48_RS20835 PF02223 Thymidylate kinase DYQ48_RS20850 PF03309 Type III pantothenate kinase DYQ48_RS20855 PF08279 HTH domain DYQ48_RS20855 PF03099 Biotin/lipoate A/B protein ligase family DYQ48_RS20855 PF02237 Biotin protein ligase C terminal domain DYQ48_RS20865 PF06167 Glucose-regulated metallo-peptidase M90 DYQ48_RS20880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS20885 PF00072 Response regulator receiver domain DYQ48_RS20885 PF00486 Transcriptional regulatory protein, C terminal DYQ48_RS20895 PF01207 Dihydrouridine synthase (Dus) DYQ48_RS20915 PF06628 Catalase-related immune-responsive DYQ48_RS20915 PF00199 Catalase DYQ48_RS20920 PF13307 Helicase C-terminal domain DYQ48_RS20920 PF06733 DEAD_2 DYQ48_RS20935 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DYQ48_RS20935 PF01488 Shikimate / quinate 5-dehydrogenase DYQ48_RS20935 PF08501 Shikimate dehydrogenase substrate binding domain DYQ48_RS20955 PF00667 FAD binding domain DYQ48_RS20955 PF00258 Flavodoxin DYQ48_RS20955 PF00175 Oxidoreductase NAD-binding domain DYQ48_RS20960 PF00490 Delta-aminolevulinic acid dehydratase DYQ48_RS20995 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DYQ48_RS20995 PF00326 Prolyl oligopeptidase family DYQ48_RS21000 PF00043 Glutathione S-transferase, C-terminal domain DYQ48_RS21000 PF02798 Glutathione S-transferase, N-terminal domain DYQ48_RS21020 PF04820 Tryptophan halogenase DYQ48_RS21035 PF00005 ABC transporter DYQ48_RS21045 PF01381 Helix-turn-helix DYQ48_RS21055 PF01229 Glycosyl hydrolases family 39 DYQ48_RS21060 PF02583 Metal-sensitive transcriptional repressor DYQ48_RS21065 PF01545 Cation efflux family DYQ48_RS21070 PF00970 Oxidoreductase FAD-binding domain DYQ48_RS21070 PF00111 2Fe-2S iron-sulfur cluster binding domain DYQ48_RS21070 PF00175 Oxidoreductase NAD-binding domain DYQ48_RS21075 PF00005 ABC transporter DYQ48_RS21080 PF01061 ABC-2 type transporter DYQ48_RS21090 PF02558 Ketopantoate reductase PanE/ApbA DYQ48_RS21090 PF08546 Ketopantoate reductase PanE/ApbA C terminal DYQ48_RS21110 PF03061 Thioesterase superfamily DYQ48_RS21125 PF00268 Ribonucleotide reductase, small chain DYQ48_RS21135 PF02867 Ribonucleotide reductase, barrel domain DYQ48_RS21135 PF00317 Ribonucleotide reductase, all-alpha domain DYQ48_RS21135 PF03477 ATP cone domain DYQ48_RS21150 PF13607 Succinyl-CoA ligase like flavodoxin domain DYQ48_RS21150 PF13380 CoA binding domain DYQ48_RS21150 PF00583 Acetyltransferase (GNAT) family DYQ48_RS21165 PF04886 PT repeat DYQ48_RS21165 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS21165 PF00593 TonB dependent receptor DYQ48_RS21170 PF03448 MgtE intracellular N domain DYQ48_RS21170 PF01769 Divalent cation transporter DYQ48_RS21170 PF00571 CBS domain DYQ48_RS21180 PF02254 TrkA-N domain DYQ48_RS21180 PF00999 Sodium/hydrogen exchanger family DYQ48_RS21185 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DYQ48_RS21185 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DYQ48_RS21190 PF00723 Glycosyl hydrolases family 15 DYQ48_RS21205 PF05166 YcgL domain DYQ48_RS21210 PF00109 Beta-ketoacyl synthase, N-terminal domain DYQ48_RS21210 PF02801 Beta-ketoacyl synthase, C-terminal domain DYQ48_RS21225 PF04820 Tryptophan halogenase DYQ48_RS21275 PF07977 FabA-like domain DYQ48_RS21280 PF01553 Acyltransferase DYQ48_RS21290 PF00550 Phosphopantetheine attachment site DYQ48_RS21295 PF04820 Tryptophan halogenase DYQ48_RS21305 PF13193 AMP-binding enzyme C-terminal domain DYQ48_RS21305 PF00501 AMP-binding enzyme DYQ48_RS21330 PF01218 Coproporphyrinogen III oxidase DYQ48_RS21335 PF01367 5'-3' exonuclease, C-terminal SAM fold DYQ48_RS21335 PF00476 DNA polymerase family A DYQ48_RS21335 PF01612 3'-5' exonuclease DYQ48_RS21335 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DYQ48_RS21345 PF03793 PASTA domain DYQ48_RS21345 PF00069 Protein kinase domain DYQ48_RS21365 PF01734 Patatin-like phospholipase DYQ48_RS21380 PF14602 Hexapeptide repeat of succinyl-transferase DYQ48_RS21380 PF12464 Maltose acetyltransferase DYQ48_RS21390 PF13361 UvrD-like helicase C-terminal domain DYQ48_RS21390 PF00580 UvrD/REP helicase N-terminal domain DYQ48_RS21400 PF13091 PLD-like domain DYQ48_RS21400 PF13396 Phospholipase_D-nuclease N-terminal DYQ48_RS21405 PF03466 LysR substrate binding domain DYQ48_RS21405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS21410 PF03737 Aldolase/RraA DYQ48_RS21415 PF04303 PrpF protein DYQ48_RS21420 PF04909 Amidohydrolase DYQ48_RS21425 PF00471 Ribosomal protein L33 DYQ48_RS21430 PF00830 Ribosomal L28 family DYQ48_RS21435 PF00873 AcrB/AcrD/AcrF family DYQ48_RS21440 PF13533 Biotin-lipoyl like DYQ48_RS21465 PF02527 rRNA small subunit methyltransferase G DYQ48_RS21470 PF09423 PhoD-like phosphatase DYQ48_RS21470 PF16655 PhoD-like phosphatase, N-terminal domain DYQ48_RS21475 PF09423 PhoD-like phosphatase DYQ48_RS21475 PF16655 PhoD-like phosphatase, N-terminal domain DYQ48_RS21480 PF01648 4'-phosphopantetheinyl transferase superfamily DYQ48_RS21485 PF04226 Transglycosylase associated protein DYQ48_RS21495 PF03372 Endonuclease/Exonuclease/phosphatase family DYQ48_RS21510 PF00480 ROK family DYQ48_RS21520 PF00639 PPIC-type PPIASE domain DYQ48_RS21530 PF00474 Sodium:solute symporter family DYQ48_RS21535 PF04341 Protein of unknown function, DUF485 DYQ48_RS21545 PF16177 Acetyl-coenzyme A synthetase N-terminus DYQ48_RS21545 PF13193 AMP-binding enzyme C-terminal domain DYQ48_RS21545 PF00501 AMP-binding enzyme DYQ48_RS21550 PF00072 Response regulator receiver domain DYQ48_RS21550 PF00196 Bacterial regulatory proteins, luxR family DYQ48_RS21590 PF00248 Aldo/keto reductase family DYQ48_RS21605 PF01557 Fumarylacetoacetate (FAA) hydrolase family DYQ48_RS21610 PF13378 Enolase C-terminal domain-like DYQ48_RS21610 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DYQ48_RS21620 PF05336 L-rhamnose mutarotase DYQ48_RS21625 PF07690 Major Facilitator Superfamily DYQ48_RS21630 PF01614 Bacterial transcriptional regulator DYQ48_RS21630 PF09339 IclR helix-turn-helix domain DYQ48_RS21645 PF02659 Putative manganese efflux pump DYQ48_RS21650 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS21650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS21660 PF06165 Glycosyltransferase family 36 DYQ48_RS21660 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain DYQ48_RS21675 PF01011 PQQ enzyme repeat DYQ48_RS21675 PF13360 PQQ-like domain DYQ48_RS21675 PF13570 PQQ-like domain DYQ48_RS21695 PF05598 Transposase domain (DUF772) DYQ48_RS21695 PF01609 Transposase DDE domain DYQ48_RS21715 PF04357 TamB, inner membrane protein subunit of TAM complex DYQ48_RS21720 PF01103 Surface antigen DYQ48_RS21720 PF17243 POTRA domain TamA domain 1 DYQ48_RS21725 PF05746 DALR anticodon binding domain DYQ48_RS21725 PF02092 Glycyl-tRNA synthetase beta subunit DYQ48_RS21730 PF02091 Glycyl-tRNA synthetase alpha subunit DYQ48_RS21735 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DYQ48_RS21735 PF00437 Type II/IV secretion system protein DYQ48_RS21750 PF00958 GMP synthase C terminal domain DYQ48_RS21750 PF00117 Glutamine amidotransferase class-I DYQ48_RS21760 PF00902 Sec-independent protein translocase protein (TatC) DYQ48_RS21765 PF02416 mttA/Hcf106 family DYQ48_RS21770 PF02416 mttA/Hcf106 family DYQ48_RS21780 PF00762 Ferrochelatase DYQ48_RS21785 PF12697 Alpha/beta hydrolase family DYQ48_RS21795 PF04381 Putative exonuclease, RdgC DYQ48_RS21800 PF01171 PP-loop family DYQ48_RS21815 PF00356 Bacterial regulatory proteins, lacI family DYQ48_RS21820 PF07477 Glycosyl hydrolase family 67 C-terminus DYQ48_RS21820 PF03648 Glycosyl hydrolase family 67 N-terminus DYQ48_RS21820 PF07488 Glycosyl hydrolase family 67 middle domain DYQ48_RS21830 PF13378 Enolase C-terminal domain-like DYQ48_RS21830 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DYQ48_RS21835 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DYQ48_RS21835 PF04616 Glycosyl hydrolases family 43 DYQ48_RS21840 PF07691 PA14 domain DYQ48_RS21840 PF14310 Fibronectin type III-like domain DYQ48_RS21840 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYQ48_RS21840 PF00933 Glycosyl hydrolase family 3 N terminal domain DYQ48_RS21845 PF08125 Mannitol dehydrogenase C-terminal domain DYQ48_RS21845 PF01232 Mannitol dehydrogenase Rossmann domain DYQ48_RS21870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYQ48_RS21870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYQ48_RS21875 PF02652 L-lactate permease DYQ48_RS21885 PF08450 SMP-30/Gluconolactonase/LRE-like region DYQ48_RS21890 PF00331 Glycosyl hydrolase family 10 DYQ48_RS21895 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYQ48_RS21895 PF00703 Glycosyl hydrolases family 2 DYQ48_RS21895 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DYQ48_RS21895 PF16355 Domain of unknown function (DUF4982) DYQ48_RS21895 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYQ48_RS21900 PF02614 Glucuronate isomerase DYQ48_RS21905 PF00553 Cellulose binding domain DYQ48_RS21905 PF03422 Carbohydrate binding module (family 6) DYQ48_RS21905 PF00331 Glycosyl hydrolase family 10 DYQ48_RS21925 PF04616 Glycosyl hydrolases family 43 DYQ48_RS21975 PF08240 Alcohol dehydrogenase GroES-like domain DYQ48_RS21975 PF00107 Zinc-binding dehydrogenase DYQ48_RS21975 PF16197 Ketoacyl-synthetase C-terminal extension DYQ48_RS21975 PF00109 Beta-ketoacyl synthase, N-terminal domain DYQ48_RS21975 PF02801 Beta-ketoacyl synthase, C-terminal domain DYQ48_RS21975 PF08659 KR domain DYQ48_RS21975 PF00550 Phosphopantetheine attachment site DYQ48_RS21975 PF14765 Polyketide synthase dehydratase DYQ48_RS21975 PF00698 Acyl transferase domain DYQ48_RS21980 PF01553 Acyltransferase DYQ48_RS21990 PF00356 Bacterial regulatory proteins, lacI family DYQ48_RS22000 PF04820 Tryptophan halogenase DYQ48_RS22005 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DYQ48_RS22010 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DYQ48_RS22015 PF04337 Protein of unknown function, DUF480 DYQ48_RS22030 PF13302 Acetyltransferase (GNAT) domain DYQ48_RS22035 PF00580 UvrD/REP helicase N-terminal domain DYQ48_RS22035 PF13361 UvrD-like helicase C-terminal domain DYQ48_RS22040 PF00265 Thymidine kinase DYQ48_RS22045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYQ48_RS22045 PF01590 GAF domain DYQ48_RS22045 PF00512 His Kinase A (phospho-acceptor) domain DYQ48_RS22045 PF08446 PAS fold DYQ48_RS22045 PF00360 Phytochrome region DYQ48_RS22050 PF04349 Periplasmic glucan biosynthesis protein, MdoG DYQ48_RS22060 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DYQ48_RS22060 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DYQ48_RS22060 PF06827 Zinc finger found in FPG and IleRS DYQ48_RS22090 PF03594 Benzoate membrane transport protein DYQ48_RS22095 PF01590 GAF domain DYQ48_RS22095 PF00360 Phytochrome region DYQ48_RS22095 PF08446 PAS fold DYQ48_RS22095 PF13426 PAS domain DYQ48_RS22100 PF01126 Heme oxygenase DYQ48_RS22105 PF07690 Major Facilitator Superfamily DYQ48_RS22110 PF01263 Aldose 1-epimerase DYQ48_RS22120 PF02810 SEC-C motif DYQ48_RS22125 PF01925 Sulfite exporter TauE/SafE DYQ48_RS22130 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS22130 PF00593 TonB dependent receptor DYQ48_RS22155 PF01227 GTP cyclohydrolase I DYQ48_RS22165 PF07869 Protein of unknown function (DUF1656) DYQ48_RS22170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYQ48_RS22170 PF00529 HlyD membrane-fusion protein of T1SS DYQ48_RS22175 PF02321 Outer membrane efflux protein DYQ48_RS22180 PF04632 Fusaric acid resistance protein family DYQ48_RS22185 PF00083 Sugar (and other) transporter DYQ48_RS22190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYQ48_RS22190 PF03466 LysR substrate binding domain DYQ48_RS22195 PF00106 short chain dehydrogenase DYQ48_RS22205 PF13091 PLD-like domain DYQ48_RS22205 PF13396 Phospholipase_D-nuclease N-terminal DYQ48_RS22235 PF13614 AAA domain DYQ48_RS22250 PF07804 HipA-like C-terminal domain DYQ48_RS22250 PF13657 HipA N-terminal domain DYQ48_RS22315 PF00849 RNA pseudouridylate synthase DYQ48_RS22345 PF06719 AraC-type transcriptional regulator N-terminus DYQ48_RS22345 PF12833 Helix-turn-helix domain DYQ48_RS22355 PF01381 Helix-turn-helix DYQ48_RS22360 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB DYQ48_RS22370 PF13538 UvrD-like helicase C-terminal domain DYQ48_RS22375 PF13361 UvrD-like helicase C-terminal domain DYQ48_RS22375 PF00580 UvrD/REP helicase N-terminal domain DYQ48_RS22375 PF12705 PD-(D/E)XK nuclease superfamily DYQ48_RS22380 PF17946 RecC C-terminal domain DYQ48_RS22385 PF00005 ABC transporter DYQ48_RS22390 PF02405 Permease MlaE DYQ48_RS22395 PF02470 MlaD protein DYQ48_RS22400 PF05494 MlaC protein DYQ48_RS22410 PF04333 MlaA lipoprotein DYQ48_RS22425 PF00732 GMC oxidoreductase DYQ48_RS22425 PF05199 GMC oxidoreductase DYQ48_RS22440 PF00255 Glutathione peroxidase DYQ48_RS22450 PF02646 RmuC family DYQ48_RS22455 PF13417 Glutathione S-transferase, N-terminal domain DYQ48_RS22455 PF00043 Glutathione S-transferase, C-terminal domain DYQ48_RS22460 PF13520 Amino acid permease DYQ48_RS22465 PF17678 Glycosyl hydrolase family 92 N-terminal domain DYQ48_RS22465 PF07971 Glycosyl hydrolase family 92 DYQ48_RS22480 PF00990 Diguanylate cyclase, GGDEF domain DYQ48_RS22485 PF17853 GGDEF-like domain DYQ48_RS22485 PF05651 Putative sugar diacid recognition DYQ48_RS22485 PF13556 PucR C-terminal helix-turn-helix domain DYQ48_RS22490 PF02595 Glycerate kinase family DYQ48_RS22495 PF07690 Major Facilitator Superfamily DYQ48_RS22510 PF01804 Penicillin amidase DYQ48_RS22515 PF00593 TonB dependent receptor DYQ48_RS22515 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS22530 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYQ48_RS22535 PF00005 ABC transporter DYQ48_RS22545 PF07687 Peptidase dimerisation domain DYQ48_RS22545 PF01546 Peptidase family M20/M25/M40 DYQ48_RS22550 PF00296 Luciferase-like monooxygenase DYQ48_RS22555 PF00296 Luciferase-like monooxygenase DYQ48_RS22565 PF07715 TonB-dependent Receptor Plug Domain DYQ48_RS22565 PF00593 TonB dependent receptor DYQ48_RS22570 PF01965 DJ-1/PfpI family DYQ48_RS22585 PF17785 PUA-like domain DYQ48_RS22585 PF10672 S-adenosylmethionine-dependent methyltransferase DYQ48_RS22595 PF03741 Integral membrane protein TerC family DYQ48_RS22600 PF01694 Rhomboid family DYQ48_RS22605 PF03009 Glycerophosphoryl diester phosphodiesterase family DYQ48_RS22620 PF01569 PAP2 superfamily DYQ48_RS22625 PF01926 50S ribosome-binding GTPase DYQ48_RS22625 PF12631 MnmE helical domain DYQ48_RS22625 PF10396 GTP-binding protein TrmE N-terminus DYQ48_RS22630 PF02096 60Kd inner membrane protein DYQ48_RS22630 PF14849 YidC periplasmic domain DYQ48_RS22635 PF00825 Ribonuclease P DYQ48_RS22640 PF00468 Ribosomal protein L34 DYQ48_RS22650 PF00308 Bacterial dnaA protein DYQ48_RS22650 PF08299 Bacterial dnaA protein helix-turn-helix DYQ48_RS22650 PF11638 DnaA N-terminal domain DYQ48_RS22725 PF11740 Plasmid replication region DNA-binding N-term DYQ48_RS22740 PF06067 Domain of unknown function (DUF932) DYQ48_RS22765 PF18495 Antitoxin VbhA DYQ48_RS22770 PF17841 BID domain of Bartonella effector protein (Bep) DYQ48_RS22770 PF02661 Fic/DOC family DYQ48_RS22785 PF03230 Antirestriction protein DYQ48_RS22825 PF00239 Resolvase, N terminal domain DYQ48_RS22825 PF02796 Helix-turn-helix domain of resolvase DYQ48_RS22870 PF09722 Protein of unknown function (DUF2384) DYQ48_RS22870 PF01936 NYN domain DYQ48_RS22935 PF07517 SecA DEAD-like domain DYQ48_RS22935 PF01043 SecA preprotein cross-linking domain DYQ48_RS22935 PF07516 SecA Wing and Scaffold domain DYQ48_RS22935 PF02810 SEC-C motif DYQ48_RS22940 PF03377 TAL effector repeat DYQ48_RS22975 PF09722 Protein of unknown function (DUF2384) DYQ48_RS22975 PF01936 NYN domain